Prediction of potential genes in microbial genomes Time: Sun May 29 12:11:08 2011 Seq name: gi|304427577|gb|AEEM01000001.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00011, whole genome shotgun sequence Length of sequence - 5021 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 114 - 1648 99.0 # AF323911 [D:1..1535] # 16S ribosomal RNA # Streptococcus gallolyticus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 1708 - 1780 84.6 # Ala TGC 0 0 + LSU_RRNA 1925 - 4823 99.0 # AB168118 [D:1..2900] # 23S ribosomal RNA # Streptococcus equinus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + 5S_RRNA 4906 - 5021 97.0 # CP000407 [D:92704..92819] # 5S ribosomal RNA # Streptococcus suis 05ZYH33 # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 29 12:12:49 2011 Seq name: gi|304427513|gb|AEEM01000002.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00012, whole genome shotgun sequence Length of sequence - 54517 bp Number of predicted genes - 63, with homology - 61 Number of transcription units - 17, operones - 14 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 11 - 81 71.9 # Gly TCC 0 0 + TRNA 114 - 187 89.3 # Ile GAT 0 0 + TRNA 198 - 285 56.1 # Ser GCT 0 0 + Prom 1191 - 1250 7.1 2 1 Op 2 . + CDS 1363 - 1695 265 ## GALLO_0018 putative cell shape-determining protein MreD + Term 1725 - 1758 2.4 + Prom 1708 - 1767 7.4 3 2 Op 1 1/0.000 + CDS 1797 - 3179 1906 ## COG3883 Uncharacterized protein conserved in bacteria + Term 3189 - 3222 3.1 + Prom 3240 - 3299 7.3 4 2 Op 2 . + CDS 3322 - 4290 1426 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 4313 - 4360 4.2 + Prom 4412 - 4471 8.0 5 3 Op 1 2/0.000 + CDS 4493 - 5668 1499 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 6 3 Op 2 2/0.000 + CDS 5658 - 6413 525 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Term 6416 - 6468 8.2 + Prom 6499 - 6558 7.4 7 4 Op 1 3/0.000 + CDS 6585 - 7580 1256 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 8 4 Op 2 1/0.000 + CDS 7597 - 7839 280 ## COG0236 Acyl carrier protein + Term 7840 - 7884 3.0 + Prom 7878 - 7937 7.5 9 5 Op 1 2/0.000 + CDS 7964 - 8674 951 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 10 5 Op 2 10/0.000 + CDS 8726 - 12451 4125 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 12533 - 12569 5.2 + Prom 12457 - 12516 5.4 11 6 Op 1 13/0.000 + CDS 12620 - 14083 1783 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 12 6 Op 2 21/0.000 + CDS 14128 - 15147 851 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 13 6 Op 3 . + CDS 15147 - 15698 725 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN + Term 15718 - 15772 -0.3 + Prom 15713 - 15772 2.2 14 7 Op 1 . + CDS 15806 - 16561 753 ## GALLO_0030 putative acetyltransferase, GNAT family 15 7 Op 2 17/0.000 + CDS 16619 - 18166 2234 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 18182 - 18232 9.0 + Prom 18974 - 19033 6.7 16 8 Op 1 . + CDS 19172 - 20434 1761 ## COG0151 Phosphoribosylamine-glycine ligase 17 8 Op 2 . + CDS 20358 - 20873 305 ## COG1683 Uncharacterized conserved protein 18 8 Op 3 29/0.000 + CDS 20873 - 21361 741 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 19 8 Op 4 . + CDS 21348 - 22421 1163 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) + Prom 22474 - 22533 6.8 20 9 Tu 1 . + CDS 22555 - 23478 272 ## GALLO_0036 hypothetical protein + Prom 23577 - 23636 5.0 21 10 Op 1 1/0.000 + CDS 23780 - 25078 1839 ## COG0015 Adenylosuccinate lyase + Term 25079 - 25132 11.6 + Prom 25136 - 25195 11.8 22 10 Op 2 . + CDS 25225 - 26124 614 ## COG1396 Predicted transcriptional regulators + Term 26281 - 26322 5.4 + Prom 27059 - 27118 8.2 23 11 Op 1 2/0.000 + CDS 27366 - 27797 399 ## COG0394 Protein-tyrosine-phosphatase 24 11 Op 2 1/0.000 + CDS 27817 - 28197 448 ## COG4642 Uncharacterized protein conserved in bacteria 25 11 Op 3 . + CDS 28215 - 29987 1750 ## COG1835 Predicted acyltransferases + Term 29997 - 30030 2.4 + Prom 30068 - 30127 6.7 26 12 Tu 1 . + CDS 30162 - 30239 69 ## + Term 30249 - 30276 -0.8 + Prom 30268 - 30327 8.3 27 13 Op 1 2/0.000 + CDS 30356 - 31840 1831 ## COG0498 Threonine synthase + Term 31851 - 31893 4.0 + Prom 31842 - 31901 2.5 28 13 Op 2 . + CDS 31963 - 33192 1054 ## COG0534 Na+-driven multidrug efflux pump + Term 33223 - 33259 -0.9 + Prom 33215 - 33274 5.5 29 14 Op 1 1/0.000 + CDS 33319 - 35433 2471 ## COG2409 Predicted drug exporters of the RND superfamily + Term 35441 - 35473 3.3 30 14 Op 2 19/0.000 + CDS 35477 - 36667 928 ## COG4585 Signal transduction histidine kinase 31 14 Op 3 1/0.000 + CDS 36679 - 37290 477 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 32 14 Op 4 . + CDS 37363 - 38256 747 ## COG0583 Transcriptional regulator + Term 38258 - 38290 -0.9 + Prom 38304 - 38363 6.2 33 15 Tu 1 . + CDS 38415 - 38831 195 ## GALLO_0048 hypothetical protein + Term 38890 - 38934 5.3 + Prom 38834 - 38893 5.6 34 16 Op 1 . + CDS 38935 - 39144 84 ## 35 16 Op 2 40/0.000 + CDS 39162 - 39470 510 ## PROTEIN SUPPORTED gi|55821906|ref|YP_140348.1| 30S ribosomal protein S10 + Prom 39501 - 39560 5.1 36 16 Op 3 58/0.000 + CDS 39580 - 40206 1046 ## PROTEIN SUPPORTED gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 37 16 Op 4 61/0.000 + CDS 40230 - 40853 991 ## PROTEIN SUPPORTED gi|222152266|ref|YP_002561441.1| 50S ribosomal protein L4 38 16 Op 5 61/0.000 + CDS 40853 - 41149 462 ## PROTEIN SUPPORTED gi|222152267|ref|YP_002561442.1| 50S ribosomal protein L23 39 16 Op 6 60/0.000 + CDS 41167 - 42000 1408 ## PROTEIN SUPPORTED gi|228478123|ref|ZP_04062734.1| ribosomal protein L2 + Term 42050 - 42083 -0.8 + Prom 42019 - 42078 3.2 40 16 Op 7 59/0.000 + CDS 42098 - 42376 487 ## PROTEIN SUPPORTED gi|15674291|ref|NP_268464.1| 30S ribosomal protein S19 41 16 Op 8 61/0.000 + CDS 42392 - 42736 548 ## PROTEIN SUPPORTED gi|55821900|ref|YP_140342.1| 50S ribosomal protein L22 42 16 Op 9 50/0.000 + CDS 42749 - 43402 1082 ## PROTEIN SUPPORTED gi|195977214|ref|YP_002122458.1| 30S ribosomal protein S3 43 16 Op 10 50/0.000 + CDS 43406 - 43819 701 ## PROTEIN SUPPORTED gi|116628591|ref|YP_821210.1| 50S ribosomal protein L16 44 16 Op 11 50/0.000 + CDS 43829 - 44035 318 ## PROTEIN SUPPORTED gi|24380361|ref|NP_722316.1| 50S ribosomal protein L29 45 16 Op 12 50/0.000 + CDS 44063 - 44323 430 ## PROTEIN SUPPORTED gi|116628589|ref|YP_821208.1| 30S ribosomal protein S17 46 16 Op 13 57/0.000 + CDS 44348 - 44716 598 ## PROTEIN SUPPORTED gi|195977218|ref|YP_002122462.1| 50S ribosomal protein L14 47 16 Op 14 48/0.000 + CDS 44796 - 45101 502 ## PROTEIN SUPPORTED gi|24380358|ref|NP_722313.1| 50S ribosomal protein L24 48 16 Op 15 50/0.000 + CDS 45130 - 45672 878 ## PROTEIN SUPPORTED gi|195977220|ref|YP_002122464.1| 50S ribosomal protein L5 49 16 Op 16 50/0.000 + CDS 45690 - 45875 323 ## PROTEIN SUPPORTED gi|228477968|ref|ZP_04062579.1| ribosomal protein S14p/S29e + Prom 45915 - 45974 1.7 50 16 Op 17 55/0.000 + CDS 46082 - 46480 657 ## PROTEIN SUPPORTED gi|228477967|ref|ZP_04062578.1| ribosomal protein S8 + Prom 46508 - 46567 5.8 51 16 Op 18 46/0.000 + CDS 46624 - 47160 858 ## PROTEIN SUPPORTED gi|228478090|ref|ZP_04062701.1| ribosomal protein L6 + Term 47166 - 47217 3.2 + Prom 47169 - 47228 6.5 52 17 Op 1 56/0.000 + CDS 47255 - 47620 590 ## PROTEIN SUPPORTED gi|195977224|ref|YP_002122468.1| 50S ribosomal protein L18 53 17 Op 2 50/0.000 + CDS 47639 - 48133 778 ## PROTEIN SUPPORTED gi|157151183|ref|YP_001451218.1| 30S ribosomal protein S5 54 17 Op 3 48/0.000 + CDS 48148 - 48330 270 ## PROTEIN SUPPORTED gi|125717004|ref|YP_001034137.1| 50S ribosomal protein L30 + Term 48395 - 48452 3.1 + Prom 48332 - 48391 2.0 55 17 Op 4 53/0.000 + CDS 48469 - 48909 705 ## PROTEIN SUPPORTED gi|22536262|ref|NP_687113.1| 50S ribosomal protein L15 56 17 Op 5 28/0.000 + CDS 48925 - 50229 722 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 50236 - 50266 2.0 + Prom 50245 - 50304 7.1 57 17 Op 6 6/0.000 + CDS 50326 - 50967 1001 ## COG0563 Adenylate kinase and related kinases + Term 51009 - 51042 0.2 + Prom 50980 - 51039 5.9 58 17 Op 7 26/0.000 + CDS 51086 - 51304 347 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 59 17 Op 8 38/0.000 + CDS 51330 - 51446 206 ## PROTEIN SUPPORTED gi|15674310|ref|NP_268483.1| 50S ribosomal protein L36 60 17 Op 9 48/0.000 + CDS 51465 - 51830 589 ## PROTEIN SUPPORTED gi|146317753|ref|YP_001197465.1| 30S ribosomal protein S13 61 17 Op 10 32/0.000 + CDS 51848 - 52231 633 ## PROTEIN SUPPORTED gi|24380344|ref|NP_722299.1| 30S ribosomal protein S11 62 17 Op 11 50/0.000 + CDS 52280 - 53218 1353 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 63 17 Op 12 . + CDS 53233 - 53619 613 ## PROTEIN SUPPORTED gi|125717013|ref|YP_001034146.1| 50S ribosomal protein L17 + Term 53740 - 53797 10.2 Predicted protein(s) >gi|304427513|gb|AEEM01000002.1| GENE 1 423 - 1187 766 254 aa, chain + ## HITS:1 COG:SP2218 KEGG:ns NR:ns ## COG: SP2218 COG1792 # Protein_GI_number: 15902022 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Streptococcus pneumoniae TIGR4 # 14 254 30 271 272 140 36.0 2e-33 MSLAFLFRNSGVVSAISSPIRSVVARVDSVVSAPFRFLDSANEEIRDLFNTYSENKELKQ KVAELEDQSELIDSLKEENEELNSEIGASSSITSQFSATGKVIVRSPVSWYDSLTVKLGK KNNITKKMLALSGGGLIGTVSDVDSTTSSITLLSNGSDFNIPIKITTSSAEVYGLLESYD SDKKCFVITNLNSSVDIEEGDSVVTSGLDGDTVANISVGTVSSVKNSSESLERVVYVTST ADFSDISYVTIVGD >gi|304427513|gb|AEEM01000002.1| GENE 2 1363 - 1695 265 110 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0018 NR:ns ## KEGG: GALLO_0018 # Name: mreD # Def: putative cell shape-determining protein MreD # Organism: S.gallolyticus # Pathway: not_defined # 1 110 59 168 168 132 100.0 3e-30 MFISSLVLGGIFDIYYLNRIGLVIFLLPILVIFTSKISKNFFVSNFQTLIFYIIVLFLFE IVGELGAILLGMTTMSMTYFIAYCFAPTLIYNILMYLIFQKVFKKVFLES >gi|304427513|gb|AEEM01000002.1| GENE 3 1797 - 3179 1906 460 aa, chain + ## HITS:1 COG:SPy0019_1 KEGG:ns NR:ns ## COG: SPy0019_1 COG3883 # Protein_GI_number: 15674263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 258 1 257 263 150 63.0 7e-36 MKKRILSAVLVSGVTLGTAAATVNADDYDTQIAAQDAVISNLTSEQAAAQSQVDALQEQV TSLQSQQDELEAQNAQLEAESQKLSEEIQALSSKIVARNESLKKQARSAQKTNTATSYIN TILNSKSISDAINRVAAVREVVSANEKMLEQQEADKAAIEQKQAENQEAINTVAANKATI EQNQAALATQQAELEAAQLNLSAQLATAEDEKASLVAQKEAAEQAAAEAAAAQAAAEAQA QAEAEAQAASVAQAQESVENGTATVDTTTDTSSQDSTTASTDTAAATEDTSSTQQAATVT PTATTTTSSSSSSSSASSSSSSSSSASTSSTASTSTSSSSSSSSSSSSVNTYPVGQCTWG VKSLASWVGNNWGNANQWIASAQAAGHSVGTTPQVGAVAVWPYDGGGYGHVAYVTAVQSS TSIQVMEANYAGNSSIGNYRGWFDPTSSTWGGGTVYYIYQ >gi|304427513|gb|AEEM01000002.1| GENE 4 3322 - 4290 1426 322 aa, chain + ## HITS:1 COG:SPy0020 KEGG:ns NR:ns ## COG: SPy0020 COG0462 # Protein_GI_number: 15674264 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 319 1 319 320 568 95.0 1e-162 MSYSDLKLFALSSNKELAEKVASAMGIELGKSTVRQFSDGEIQVNIEESIRGHHVFILQS TSSPVNDNLMEILIMVDALKRASAEKISVVIPYYGYARQDRKARSREPITSKLVANMLEV AGVDRLLTVDLHAAQIQGFFDIPVDHLMGAPLIADYFDRHGLVGDDVVVVSPDHGGVTRA RKLAQFLQTPIAIIDKRRSVTKMNTSEVMNIIGNVKGKKCILIDDMIDTAGTICHAADAL AEAGATAVYASCTHPVLSGPALENIEKSAIQKLVVLDTIYLSEERLIDKIEQISIAELIA EAITRIHEKRPLSPLFEMGTAK >gi|304427513|gb|AEEM01000002.1| GENE 5 4493 - 5668 1499 391 aa, chain + ## HITS:1 COG:SP0035 KEGG:ns NR:ns ## COG: SP0035 COG0436 # Protein_GI_number: 15899981 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 388 1 388 389 615 80.0 1e-176 MSLTNRFNKNLDKIEVSLIRQFDQSISDVPGIMKLTLGEPDFTTPDHVKEAAKAAIDANQ SHYTGMAGLPALRQAAADFVKSKYNLSYNPDNEILVTIGATEALSATLTAILEPGDTVLL PAPAYPGYEPIANLVGAEIVEIDTTANDFVLTPEMLEKAILEQGDKLKAVLLNYPTNPTG VTYSREQIKALADVLKKYDIFVISDEVYSELTYNDEPHVSIAEYLPEQTILINGLSKSHA MTGWRIGLIFAPAIFTAQLIKSHQYLVTAAATMAQFAAIEALSAGKDDALPMKVEYIKRR DYIIDKMSALGFKIIKPDGAFYIFAKIPAGYEQDSFKFCQDFAREKAVAFIPGVAFGKYG EGYLRLSYAASMETITTAMERLKEFMEEHAN >gi|304427513|gb|AEEM01000002.1| GENE 6 5658 - 6413 525 251 aa, chain + ## HITS:1 COG:SP0036 KEGG:ns NR:ns ## COG: SP0036 COG1381 # Protein_GI_number: 15899982 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Streptococcus pneumoniae TIGR4 # 1 251 2 252 256 334 63.0 8e-92 MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTVAKFILK INDTGLSFIEDYKEVDSFKEINADLFKLSYASYVTALADAAVPDGVADPQLFAFVNKTLS LMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGLPFDFSHKYSGLLCPEHYGKD DYRSHLDPNVLYLVDRFQAIHFDELKTISVKPEMKRKLRLFIDDIYDNYVGLRLKSKKFI DDLGTWGNIMK >gi|304427513|gb|AEEM01000002.1| GENE 7 6585 - 7580 1256 331 aa, chain + ## HITS:1 COG:SP0037 KEGG:ns NR:ns ## COG: SP0037 COG0416 # Protein_GI_number: 15899983 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 328 1 328 330 489 79.0 1e-138 MKKIAVDAMGGDNAPKAIIEGVNRALAEFSDIEIQLYGDESKIKEYLTATERVSIIHTEE KINSDDEPAKAIRRKKKASMVLGAQAVKEGTADAVISAGNTGALLAAGLFVVGRIKGIDR PGLMSTLPTLDGKGYDMLDLGANAENTPKHLHQYAILGSFYAKNVRGIAKPRVGLLNNGT EATKGDPLHKEAYALLAEDASLNFVGNVEARDLMNGVADVVVSDGFTGNAVLKTMEGTAL NIMGGLKSSIKSGGLKAKLGALLLKDSLYQLKGTMDYSSAGGAVLFGLKAPVVKCHGSSD AQAVYYTIRQVRTMLETNVVGQLVEAFTPKD >gi|304427513|gb|AEEM01000002.1| GENE 8 7597 - 7839 280 80 aa, chain + ## HITS:1 COG:SPy0023 KEGG:ns NR:ns ## COG: SPy0023 COG0236 # Protein_GI_number: 15674267 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 79 1 79 80 71 51.0 4e-13 MTKEAIFERICFIIKEQLHKPELNITQTTTLHDDLGVDSIALMEFIINLEDEFHLEIPDE DVENMKCMGEMMEYLYNRVN >gi|304427513|gb|AEEM01000002.1| GENE 9 7964 - 8674 951 236 aa, chain + ## HITS:1 COG:SPy0024 KEGG:ns NR:ns ## COG: SPy0024 COG0152 # Protein_GI_number: 15674268 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Streptococcus pyogenes M1 GAS # 1 235 11 244 244 368 81.0 1e-102 MSRQLIYTGKAKDIYTTSEDENLIISVYKDQATMLNGARKETIKGKGVLNNQISSLIFTK LNEAGVATHFVKQLSETEQLNKKVDIVPLEVVLRNVTAGSFSKRFGVEEGIKLDTPIVEF YYKNDDLDDPFINDEHVKFLGIASDEDIAYIKAETRRINDLLKDWFSQIGLNLIDFKLEF GKDKDGKIILADEFSPDNCRLWDAEGHHMDKDVFRRDLGSLTDVYEVVLEKLKGLN >gi|304427513|gb|AEEM01000002.1| GENE 10 8726 - 12451 4125 1241 aa, chain + ## HITS:1 COG:SPy0025_1 KEGG:ns NR:ns ## COG: SPy0025_1 COG0046 # Protein_GI_number: 15674269 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Streptococcus pyogenes M1 GAS # 1 982 17 998 998 1660 86.0 0 MNKRIFVEKKSNFNIKAQALVKELKHNLQLTSLTDLRIIQVYDVFNLADSLFERAEKHIF SEQVTDNILAESDVVAELSNYAFFAIESLPGQFDQRAASSQEALLLLGSSNDVTVNTAQL YLVNKDIDTAELDAVKNYLLNPVDSRFKDITTGIAPQAFSESDKTIPNLDFFKTYTAAEF ADYKAEQGLAMEVDDLVFIQEYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKHIDF SASKFQKQLQATYDKYIAMRDELGRSEKPQTLMDMATIFGRYERANGRLDDMEVSDEINA CSVEIEVDVNGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMR ISGAGDITTPISETRLGKLPQQVISKTAAHGYSSYGNQIGLATTYVKEYFHPGFVAKRME LGAVVGAAPKGNVVREKPEAGDVVILLGGKTGRDGVGGATGSSKVQTVESVETAGAEVQK GNAIEERKIQRLFRNGNVTRLIKKSNDFGAGGVCVAIGELADGLEIDLNKVPLKYQGLNG TEIAISESQERMAVVVRPKDVEAFVAECHKENIDAVVVATVTEKPNLVMTWNGQTIVDIE RRFLDTNGVRVVVDANVVDSQVDMPEQRTTSAATLESDTVNVLSDLNHASQKGLQTIFDS SVGRSTVNHPIGGRYQITPTESSVQKLPVQNGVTTTASVMAQGFNPYIAEWSPYHGAAYA VIEATARLVATGANWSKARFSYQEYFQRMDKQTERFGQPVSALLGSIEAQLQLGLPSIGG KDSMSGTFEELTVPPTLVAFGVTTADSRNVLSPEFKAAGEYIYYIPGQAISQEIDFDLIK ANFAKFEAIQKAHHITSASAVKYGGVIESLALAAFGNHIGAKVELAELTTSLTAQLGGFI FTSTEEIAEVSKIGETTADFTLAVNGVNLAGDKLLSAFEGKLEDVYPTEFEQSTKLEDVP AVASDAVIKASEKVAEPLVYIPVFPGTNSEYDSAKAFEQAGAKVNLVPFVTLDEAAIEAS VDTMVDNISKANIIFFAGGFSAADEPDGSAKFIVNILLNQKVRAAIDSFIEKGGLIIGIC NGFQALVKSGLLPYGNFEDATEISPTLFYNDANQHVAKMVETRIANTNSPWLAGVEVGDV HAIPVSHGEGKFVVTDEEFAELRDNGQIFSQYVDFDGKPSMDSKYNPNGSVNAIEGITSK NGQIIGKMGHSERYEDGLFQNIPGNKDQHLFRSAVEYFTKG >gi|304427513|gb|AEEM01000002.1| GENE 11 12620 - 14083 1783 487 aa, chain + ## HITS:1 COG:SPy0026 KEGG:ns NR:ns ## COG: SPy0026 COG0034 # Protein_GI_number: 15674270 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 483 1 483 484 891 87.0 0 MTYEVKSLNEECGVFGIWGHPQAAQVTYFGLHSLQHRGQEGAGIVTNDNGKLLQHRNTGL LSEVFKNPADLEKLTGTAAIGHVRYATAGSASINNIQPFLYNFTDEQFGLCHNGNLTNAV SLKKELEDQGAIFNASSDTEILMHLIRRSHNPEFIGKVKEALNTVKGGFAYLLMTEDKLI AALDPNGFRPLSIGQMANGAWVVSSETCAFEVVGAKWVRDVKPGELVIIDDNGIQYDTYT NDTQLAICSMEYIYFARPDSDIYGVNVHTARKNMGKRLAQEFQHEADIVVGVPNSSLSAA MGFAEESGLPNEMGLVKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMVDDSI VRGTTSRRIVRLLREAGATEVHVAIGSPELKYPCFYGIDIQNRRELISANHTKDEVCEII GADSLTYLSIDGLIESIGLDTDAPNGGLCVAYFDGKYPTPLYDYEEPYLKSLEEKTSFYI HEVNENK >gi|304427513|gb|AEEM01000002.1| GENE 12 14128 - 15147 851 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 5 334 13 343 356 332 51 3e-90 MTKNAYAQSGVDVEAGYEVVARIKKHVARTERAGVMGALGGFGGMFDLTKTGVKEPVLIS GTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYIATGKNEPAKLEQV VAGVAEGCVQSGAALIGGETAEMPGMYGEDDYDLAGFAVGVAEKSQIIDGSKVSDGDVLL GLASSGIHSNGYSLVRRVFADYTGEEVLPELEGKKLKEVLLEPTRIYVKAVLPLIKEELV NGIAHITGGGFIENVPRMFADDLAAEIEEDKVPVLPIFKALEKYGNIKHEEMFEIFNMGI GLMLAVSPDKVERVKELLDEPVYELGRIVKKADASVVIK >gi|304427513|gb|AEEM01000002.1| GENE 13 15147 - 15698 725 183 aa, chain + ## HITS:1 COG:SPy0028 KEGG:ns NR:ns ## COG: SPy0028 COG0299 # Protein_GI_number: 15674272 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Streptococcus pyogenes M1 GAS # 3 183 2 182 184 311 82.0 6e-85 MKKIAVFASGNGSNFQVIAEQFPVEFVFSDHRDAYVLERAEKLGVTAHAFELKEFDNKVA YEEAIVALLEKYDIDLICLAGYMKIVGPTLLAAYEGRIINIHPAYLPEFPGAHGIDDAWE AGVDQSGVTIHWVDNGVDTGKVIKQVRVPRLADDTIDSFEARIHENEYKLYPEVLESLGV EKK >gi|304427513|gb|AEEM01000002.1| GENE 14 15806 - 16561 753 251 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0030 NR:ns ## KEGG: GALLO_0030 # Name: not_defined # Def: putative acetyltransferase, GNAT family # Organism: S.gallolyticus # Pathway: not_defined # 1 251 1 251 251 505 100.0 1e-142 MKMKNNSKRLAELFGNSEETMIYSCLQGIMGEILIDDEENPKSALAKIGRYASFGFLSGQ PTISLIEACRGEDIILVPKDRNWIRLIEESYADIAQPFIRYATKKNTAFDSEQLKSYILN LSDVFQIKPIDKNLYRQCLKQEWSRDLVANYKDVEDFLRLGLGYVAVYENQIVSGASSYS TYKDGIEIEVDTHPNFRRKGLAKAVAAQLILECLKQNRYPSWDAHTKNSLDLAKKLGYEF SHEYIAYEFEW >gi|304427513|gb|AEEM01000002.1| GENE 15 16619 - 18166 2234 515 aa, chain + ## HITS:1 COG:SP0050 KEGG:ns NR:ns ## COG: SP0050 COG0138 # Protein_GI_number: 15899995 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Streptococcus pneumoniae TIGR4 # 1 515 1 515 515 938 92.0 0 MTKRALISVSDKAGIVEFAQELKKLGWDIISTGGTKVALDKAGVDTIAIDDVTGFPEMMD GRVKTLHPNIHGGLLARRDLDSHLQAAKDNHIELIDLVVVNLYPFKETILKPEVTYADAV ENIDIGGPSMLRSAAKNHASVTVVVDPADYAVVLDELSANGETSFETRQRLAAKVFRHTA AYDALIAEYFTKQVGETKPEKLTITYDLKQPMRYGENPQQDADFYQKALPTDYSIASAKQ LNGKELSFNNIRDADAAIRIIRDFKDRPTVVALKHMNPCGIGQADDIETAWDYAYESDPV SIFGGIVVLNREVDAATAKKMHAIFLEIIIAPSYSEEALEILTTKKKNLRILQLPFEAQE ASQVEKEYTGVVGGLLVQNQDVVEENPADWKVVTKRQPNDQEKTALEFAWKAIKYVKSNG IIVTNDHMTLGVGPGQTNRVASVRIALDQAKDRLDGAVLASDAFFPFADNVEEIAAAGVK AIIQPGGSVRDQESIDMADKYGIAMVFTGVRHFRH >gi|304427513|gb|AEEM01000002.1| GENE 16 19172 - 20434 1761 420 aa, chain + ## HITS:1 COG:SP0051 KEGG:ns NR:ns ## COG: SP0051 COG0151 # Protein_GI_number: 15899996 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 418 1 419 420 703 86.0 0 MKLLVVGSGGREHAIAKKLLESPQVNQVFVAPGNDGMTLDGLDLVNIGISEHSKLIDFAK ANDIAWTFIGPDDALAAGIVDDFNAAGLKAFGPSKAAAELEWSKDFAKSIMAKYHVPTAA YGTFSDFEQAKSYIEEHGAPIVVKADGLALGKGVVVAETVEQAIEAAHEMLLDNKFGDSG ARVVIEEFLDGEEFSLFAFVNGDKFYIMPTAQDHKRAFDDDKGPNTGGMGAYAPVPHLPQ SVVDTAVETIVKPVLNGMIAEGRPYLGVLYAGLILTADGPKVIEFNSRFGDPETQVILPR LTSDFAQNITDILDGKAPEITWTDKGVTLGVVVASEGYPVAYEKGVRLPEKTSGDIITYY AGAKFADDKALLSNGGRVYMLVTTKEDVKSAQDVIYAELATQDTTGLFYRNDIGSKAIGR >gi|304427513|gb|AEEM01000002.1| GENE 17 20358 - 20873 305 171 aa, chain + ## HITS:1 COG:FN1602 KEGG:ns NR:ns ## COG: FN1602 COG1683 # Protein_GI_number: 19704923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 30 169 7 148 156 107 40.0 1e-23 MLNLQLKTQQVFSIETISEAKLLDVKPKCILVSACLLGERCKYNGGHNYNQALVDYVADK DVIGVCPEVLAGLPTPREPVELCDGRVVDVAGNCYDEMFEKGIKRCLDEMAGKSIDLAIL QSRSPSCGVNQVYDGNFSGQKVAGSGLFAQKLKELGYHVVDVEDIKQLEGK >gi|304427513|gb|AEEM01000002.1| GENE 18 20873 - 21361 741 162 aa, chain + ## HITS:1 COG:SPy0033 KEGG:ns NR:ns ## COG: SPy0033 COG0041 # Protein_GI_number: 15674275 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Streptococcus pyogenes M1 GAS # 3 161 4 162 163 226 86.0 2e-59 MKPLISVIMGSKSDWATMKKTAEVLDQFGVAYEKKVVSAHRTPDLMFKHAEEARGRGIKV IIAGAGGAAHLPGMVAAKTTLPVIGVPVKSRALSGLDSLYSIVQMPGGVPVATMAIGESG AANAALTALRILAIEDTELAEKLENFALEQGKVAEASTDELD >gi|304427513|gb|AEEM01000002.1| GENE 19 21348 - 22421 1163 357 aa, chain + ## HITS:1 COG:SP0054 KEGG:ns NR:ns ## COG: SP0054 COG0026 # Protein_GI_number: 15899999 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Streptococcus pneumoniae TIGR4 # 1 357 1 357 363 580 82.0 1e-165 MNSTKTIGIIGGGQLGQMMAISAIYMGHKVVTLDPAADCPASRVSDMIVAPYDDVEAMRE LAKRCDVLTYEFENVDADALDAVVKEGQLPQGTDLLRISQNRIFEKDFLAKTAGVKVAPY KVVTSSLDLEDIDLSKKYVLKTATGGYDGHGQIVIKSAENLADANKLANSCECVLEEFVN FDLEISVIVSGNGKDMTVFPVQENIHRNNILSKTIVPARISDELAQKAQAMAVQIAEKLE LSGTLCVEMFATPDDIIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGLPLPKIHLHQ PAVMLNVLGQHMEKAQAYVQENPSAHLHLYGKLEAKHNRKMGHITLFSDEPDSVEEL >gi|304427513|gb|AEEM01000002.1| GENE 20 22555 - 23478 272 307 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0036 NR:ns ## KEGG: GALLO_0036 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 307 55 361 361 498 100.0 1e-140 MINKLVFAIVGRIFSYLPLSVLTVPLTMFIINLVLFICFVKIVVRLFTEKRFLLGVITLY LFFAFLLGMIFWFGSIFLSLIVTIELLFPDSIQSSELLNMMHQYSRNYQAMSDVFESYAR IGAPILQFLGVSYLLNLFVPEKYQSIDLKLLDKMKRIFIKVGVTIIPLVAFIVFYHINRT TFNIIGLITVIATWLINPKNVVILINPKIKVSDDDIKPEILNRFQLLKLLISFIVAAWAI SVYFFEEQNIEIRLYISLGLLLFFMILLTLWKLFLGRNEEKWLNKNLKDEVAQKFIEVNN NSEKDNN >gi|304427513|gb|AEEM01000002.1| GENE 21 23780 - 25078 1839 432 aa, chain + ## HITS:1 COG:SP0056 KEGG:ns NR:ns ## COG: SP0056 COG0015 # Protein_GI_number: 15900001 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 432 1 432 432 806 92.0 0 MIDRYSRPEMAAIWSEENKYKAWLEVEILADEAWAELGEIPKEDVAKIRANASFDVDRIL EIEQQTRHDVVAFTRAVSESLGQERKWVHYGLTSTDVVDTAYGYLYKQANEIIRKDLHNF LEIIANKAKEHKFTIMMGRTHGVHAEPTTFGLKLATWYSEMKRNIERFEHAAAGVEAGKI SGAVGNFANIPPFVEAYVCEKLGIRAQEISTQVLPRDLHAEYFAVLASIATSIERMATEI RGLQKSEQREVEEFFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGHMVTAYENVSLWHE RDISHSSAERIISPDTTILIDYMLNRFGNIVKNLTVFPENMIRNMGSTFGLIFSQRVMLK LIEKGMTREQAYDLVQPKTAYSWDNQVDFKPLLEADEEVTSRLTQEEIDELFNPSYYTKR VDEIFNRIGLGD >gi|304427513|gb|AEEM01000002.1| GENE 22 25225 - 26124 614 299 aa, chain + ## HITS:1 COG:SPy0037 KEGG:ns NR:ns ## COG: SPy0037 COG1396 # Protein_GI_number: 15674279 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 297 2 299 303 263 49.0 2e-70 MEKFGIKVRALREKKGISREEFCGDETELSVRQLARIEKGQSVPTLNKVGYIAKVLGVTI GELTDGKNLELPTRYKELKYLLLRTPTYGDKERLKRQTSYFDEISEKYYEVIPEEERLII DCLQSKIDVHFSDDVNFGEGILNDYFDQVRRKKNFQINDLILIDLYFACLASAKSFVGIY SLDLYDELMECLLNQENLSPETSLILNNVLLNNVDLVLRFHRESFMKRIIIKSDTIMTSV HDFQRRPVLSLVEWKYYLQFKKDFLAAQKSYSNAILFANLIGDTYLENKLIEEWNNDTT >gi|304427513|gb|AEEM01000002.1| GENE 23 27366 - 27797 399 143 aa, chain + ## HITS:1 COG:SPy0039 KEGG:ns NR:ns ## COG: SPy0039 COG0394 # Protein_GI_number: 15674281 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 140 1 140 145 194 64.0 4e-50 MKKVCFVCLGNICRSPMAEFVMKDLAGTEGWLIESCATSGWEHGNLIHHGTQSIFKKHNI SYDKHKSSQQISRKDFYDFDVIIGMDAENVADLKHMSQGKYDDKIFLFVKGGVPDPWFTG DFDATYDLVKRGCEQWLTRLKNS >gi|304427513|gb|AEEM01000002.1| GENE 24 27817 - 28197 448 126 aa, chain + ## HITS:1 COG:SPy0040 KEGG:ns NR:ns ## COG: SPy0040 COG4642 # Protein_GI_number: 15674282 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 126 8 133 133 156 57.0 9e-39 MKKIKITRGRIELLTVLILIICGLSVFTLSMKSKTTLTYDNGKITYTGYVVNHRMNGQGK LTYENGDTYEGNFVDGVFEGQGTFTSNSGWTYQGEFKDGQPDGQGTLTAQNGEVYTGTFK QGIFQK >gi|304427513|gb|AEEM01000002.1| GENE 25 28215 - 29987 1750 590 aa, chain + ## HITS:1 COG:SPy0041 KEGG:ns NR:ns ## COG: SPy0041 COG1835 # Protein_GI_number: 15674283 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Streptococcus pyogenes M1 GAS # 2 585 9 591 591 746 65.0 0 MVRVTGLLLVLLYHFFKTAFPGGFIGVDIFFTFSGYLITALLIDEYSKNKKIDLLGFYKR RFYRIVPPLVLMILIVMPFTYLVRKDYVASIGSQIAAAVGFTTNFYEIITGGNYETQFIP HLFVHTWSLAIEMHFYLIWGFLVWFLGKHHDNVAKFRSLIFAISAAFFAGSFLSMFIRAF FVDNVSTIYFSSLSHSFPFFLGAMVATMTGIRETTARFKKNVRLWSTKRSILTMVLSFAL LLLLTFALKFDQRITYLFGFVLASLFVTVMIYAARVLNDQTPNAKEPAIINYLADVSYGV YLFHWPFYIIFTQLMSNGLAVLVTVIFSLIFSTLSYYVLEPFLAGKSVKLLGLNLDLHPY QKWLYGGGTLLGLVTIVTIIISPAVGDFETSLLVNSLQQAQTNLNRTHTVTAGDATALSD VTVIGDSVALRSSASFSSLLPDAQVDAAVSRSFDDAFEIFQNEISSGTLSQTTVLAVGVN SLDNYQEDLQQFIDALPDGYRLIIVTPYNSNNEAQVKEVRDYELTLADTYNYVTVADWYK AATKHPEIWSGTDGVHYSDSDTTGADLYVKTIQKAIEKSAKNPAKGESDS >gi|304427513|gb|AEEM01000002.1| GENE 26 30162 - 30239 69 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADLFYDVLASVWISIAGVDSRWGK >gi|304427513|gb|AEEM01000002.1| GENE 27 30356 - 31840 1831 494 aa, chain + ## HITS:1 COG:SP2066 KEGG:ns NR:ns ## COG: SP2066 COG0498 # Protein_GI_number: 15901885 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 494 1 494 494 737 79.0 0 MTLIYQSTRDENNKVTASQAILQGLATDGGLFTPVSLPEVALDFETLKDASYQEVAKLVL SAFLDDFTEEELAYCIDSAYDAKFDTPEIAPLVKLGDQYNLELFHGSTIAFKDMALSILP YLLTTSAKKQGVDNKIVILTATSGDTGKAAMAGFADVPGTEIIVFYPKDGVSKIQELQMT TQTGDNTHVVAITGNFDDAQTDVKRMFNDVDLREKLLAHKTQFSSANSMNVGRLVPQVVY YVYAYAQLVKAGHIKAGDKVNFTVPTGNFGNILAAYYASQIGVPVGKLICASNENKVLTD FFTTGTYDKKREFKVTTSPSMDILVSSNLERLIFHLLGNDAAKTKALMEQLVSEGEYTLP DVDQSILDLFEAGYATEVETSAEIKRVYEASDYIEDPHTAVASAVYQKYAERTGDKTPTV IASTASPYKFPRVAVEAVSGQAPADDFVAVKELEKLSGVAIPKAVNGLETAEVRHKTVVA TGDMQKAVENYLGL >gi|304427513|gb|AEEM01000002.1| GENE 28 31963 - 33192 1054 409 aa, chain + ## HITS:1 COG:SPy0045 KEGG:ns NR:ns ## COG: SPy0045 COG0534 # Protein_GI_number: 15674285 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pyogenes M1 GAS # 1 403 24 426 430 402 58.0 1e-112 MLMGVVDNYLVAQVGLIAVSGVSVANNIITIYQAIFIALGAAVSSLVAKSRGEKNNEKTV QYQSEAILVTLGLSLVLGLFSLLFGKTILHWLGTETTVTQAGGLYLAIVGGLIVSLGLMT TLSAFLRALGKPQLPMYVSLLSNVLNAIFSAVSVFVFHWGIAGVACSTVLSRFIGTLLLA SQLPMGNILKTIKWHLDSDLLKIALPAAGERLMMRAGDVVIVAIIVKFGTEIVAGNAIGE TLTQFNYMPGMGVATATVILVAHSLGQKNTKDIKQLVRDSYLISTIMMLCVGALVYVFGS HLTYLFTTNQTALTASLVVLFYSFVGGPATAGTLIYTAAWQGLGNAKLPFYATTFGMWVI RIISGYVLGVSLNLGLTGVWLATLADNIFRWLFLYSLYKKYMKELAMMS >gi|304427513|gb|AEEM01000002.1| GENE 29 33319 - 35433 2471 704 aa, chain + ## HITS:1 COG:BS_ydfJ KEGG:ns NR:ns ## COG: BS_ydfJ COG2409 # Protein_GI_number: 16077610 # Func_class: R General function prediction only # Function: Predicted drug exporters of the RND superfamily # Organism: Bacillus subtilis # 1 704 1 702 724 521 42.0 1e-147 MGKLLHKLSYWIFRHAKLTIVLVMLLLGALGGIAGLTGVHFSSTGLDMKGTESQTALNIV EKDFAGLASKGASEKVVFKATSGSLTDETAQQAMADFVKEEMADDAVEMVILPEQQQNLT KNNAIGYATVTFKKAKEDVKQSSINHLVKATKIPKDAGIETELTGDLTISEMDTGEKSEI YGLLAAIIILAITFASVIMAGMPILSALIGLGISVLGVVILSNWIEFTTSDLSLSGMIGL AVGIDYALFIISRYRQEIKKGHSREEALAKSMTTAGKAVIFAGTTVIVALLAMSTLGISF LSVMGFAGALSVLGAMLTALTIIPAVIVLLGKIATGEKQNRVLARFGRLKRDYGWGKFVS KFKVLLSGMVLLGLIIVALPARNMNLGLPTDANKSTKTTERRAYDIMTEGYGAGHAATLV VLVKTGDSETAQDVATELQNTANVERVTPPMIGNGKSGQYYMITLTPKTDGNAVATKNLV KAIRAKSNKNGNPTLLVTGSTAINIDMSDALLAALPKFALIIVAFAFVLLLLIFRSLLIP FVAVSGFVLSLLATLGALVFIVQEGHFDDLIGLAGPSAILNFLPVLVIGIMFGLAMDYEV FLISRMKEVYDETGDTQKALLEGMKDNGKAIFAAILIMASVFMGFVFAADSTVKSMGLAL TLGIFFDALIVRMIFVPAMLAVFGKANWYLPKWLDKLLPNVKIE >gi|304427513|gb|AEEM01000002.1| GENE 30 35477 - 36667 928 396 aa, chain + ## HITS:1 COG:BS_ydfH KEGG:ns NR:ns ## COG: BS_ydfH COG4585 # Protein_GI_number: 16077608 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 57 395 66 400 407 103 28.0 4e-22 MKTNKIEESVKYQFLKLGKWLLIGWLVFLYLFVQYLNCGYFFQTDVMSNAALVSEVLLLY FSNRLVSTKYLYLGLAVQVLLIFWLALFFDNLSSLALLVGFMPICIVEEITYQYPKRYFV MTALYGLCVLGFGLLQDGLDFFNFILLAEAVAMIALLAIYYYQMIYRQAFQAQYLQEVNE ELNQAYAQVEEATTKAVKQTLARDLHDSLTQDLIGINMHLSAMKALLDNEDYQKLAQTLE KTQHLTKESISEARQTIADYRQEKRDNLTLQLREELQKRLTNLQENYHLNTQLAMPDEIE LSYHQGMDVLRMINEALMNVIKHAEIDQVKVDVKKEGKMLQIHVINFGKPMRLLAQNNQH FGLLGMKERAAQYNGQVSINSSKNTGTVVTIELEVI >gi|304427513|gb|AEEM01000002.1| GENE 31 36679 - 37290 477 203 aa, chain + ## HITS:1 COG:SP0387 KEGG:ns NR:ns ## COG: SP0387 COG2197 # Protein_GI_number: 15900310 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 203 4 205 210 116 33.0 3e-26 MIVDDHPIVREGLANFIEIADDLTVVATASNGQEALEKLAALTRQPDLILVDLQMPEMSG KKLLEELPTLSNVLIFSTEIDGELAQHFIQKGVRGYLLKDEDPTDIVNHIQKLLADDSYI AISSEVLTASFQHRQNEENVPTITEQQKQLLQMVADGLTNKEIAAQLFVTDRTVKTYLTE LYEIFQVNNRAQAIAYAIRHNLI >gi|304427513|gb|AEEM01000002.1| GENE 32 37363 - 38256 747 297 aa, chain + ## HITS:1 COG:CAC1481 KEGG:ns NR:ns ## COG: CAC1481 COG0583 # Protein_GI_number: 15894760 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 297 1 290 292 160 32.0 4e-39 MELNHVKEFIALTKTENYLEAAENLFISQSSLSKHIKSLEVELGTTLFDRTTRQVKLNEA GKVFLKYAQQLIDVQHQCNTALINLKEAEEQSLTIGSIPIMAPYGITDMLIDFKKANVKI NLSIIEGETEQLKQKLRNDDCDLIFIRRLSGQKEVTEDLDDFAVINFTTDYLVAVLPNDH PLANQALIDLSELKNEEFLFLPPHSVMHNISLQACRQAGFTPSIAYTGKRAENIIDLVSK GMGISLLMAKPISYINTRNLVKLVPVLPHIETEIVIYYKKSALLSKAASHFLEFVQR >gi|304427513|gb|AEEM01000002.1| GENE 33 38415 - 38831 195 138 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0048 NR:ns ## KEGG: GALLO_0048 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 138 15 152 152 255 100.0 3e-67 MAFAMSFCMEYYNLSLNNGGANYGLVLDVLKEVWWITIIVFLIQEFFGGPIAVRLMSMLA KPEEIPVFMRPTIRRICTVCVMCPSMAVVSSILFKHPWGNFIPTVLTTLTFNFPMAFSIQ IFLLGPVLKKLILESGNK >gi|304427513|gb|AEEM01000002.1| GENE 34 38935 - 39144 84 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVVPENIFLEKKLKNTVKTLQTLVKSDIIYWCCKYSNFSYDTRGCDTLGCIATQKRVGF LEELAYYLK >gi|304427513|gb|AEEM01000002.1| GENE 35 39162 - 39470 510 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821906|ref|YP_140348.1| 30S ribosomal protein S10 [Streptococcus thermophilus LMG 18311] # 1 102 1 102 102 201 99 1e-50 MANKKIRIRLKAYEHRTLDTAAEKIVETATRTGATVAGPVPLPTERSLYTVIRATHKYKD SREQFEMRTHKRLIDIINPTQKTVDALMKLDLPSGVNVEIKL >gi|304427513|gb|AEEM01000002.1| GENE 36 39580 - 40206 1046 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126] # 1 208 1 208 208 407 98 1e-113 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL SNKPAKGHVAKANTAPKRFIREFKNIEGLEVGQEITVDTFEAGDVVDVTGTSKGKGFQGV IKRHGQARGPMAHGSRYHRRPGSMGPVAPNRVFKNKHLAGRMGGNRVTIQNLEVVQVIPE KNVILIKGNVPGAKKSLITIKSAVKAAK >gi|304427513|gb|AEEM01000002.1| GENE 37 40230 - 40853 991 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|222152266|ref|YP_002561441.1| 50S ribosomal protein L4 [Streptococcus uberis 0140J] # 1 207 1 207 207 386 97 1e-106 MANVKLFDQTGKEVSSVELNDAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGG GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTSRSYGYKLPQKVRRLALKSVYSAKVAE DKFVAVESLSFAAPKTAEFANVLSALNVDSKVLVILEEGNEFAALSARNLPNVKVATATT ASVLDIVNSDKLLVTKEAISTIEEVLA >gi|304427513|gb|AEEM01000002.1| GENE 38 40853 - 41149 462 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|222152267|ref|YP_002561442.1| 50S ribosomal protein L23 [Streptococcus uberis 0140J] # 1 98 1 98 98 182 95 4e-45 MNLYDVIKKPVITEKSMYDLEAGKYTFEVDSRAHKLLIKQAVEAAFDGVKVANVNTVTVK PKAKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE >gi|304427513|gb|AEEM01000002.1| GENE 39 41167 - 42000 1408 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478123|ref|ZP_04062734.1| ribosomal protein L2 [Streptococcus salivarius SK126] # 1 277 1 277 277 546 96 1e-155 MGIKAYKPTTNGRRNMTSLDFAEITTSTPEKSLLVSLKNKAGRNNNGRITVRHQGGGHKR HYRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYILAPKGLEVGQRIVSGP DADIKVGNALPLANIPVGTVIHNIELQPGKGAELIRAAGASAQVLGQEGKYVLVRLQSGE VRMILGTCRATIGTVGNEQQSLVNLGKAGRSRWMGIRPTVRGSVMNPNDHPHGGGEGKAP VGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNDK >gi|304427513|gb|AEEM01000002.1| GENE 40 42098 - 42376 487 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674291|ref|NP_268464.1| 30S ribosomal protein S19 [Streptococcus pyogenes M1 GAS] # 1 92 1 92 92 192 100 4e-48 MGRSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPV YIQEDMVGHKLGEFAPTRTYKGHAADDKKTRR >gi|304427513|gb|AEEM01000002.1| GENE 41 42392 - 42736 548 114 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821900|ref|YP_140342.1| 50S ribosomal protein L22 [Streptococcus thermophilus LMG 18311] # 1 114 1 114 114 215 98 4e-55 MAEITSAKAMARTVRVSPRKTRLVLDLIRGKNVADAIAILKFTPNKAARVVEKVLNSAIA NAENNFGLEKANLVVSETFANEGPTMKRFRPRAKGSASPINKRTTHVTVVVSEK >gi|304427513|gb|AEEM01000002.1| GENE 42 42749 - 43402 1082 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|195977214|ref|YP_002122458.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 217 1 217 217 421 96 1e-117 MGQKVHPIGMRVGIIRDWDAKWYAEKEYADYLHEDLAIRKFIQTELADASVSRIEIERAV NKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENIA RQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRAD IDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTKGGK >gi|304427513|gb|AEEM01000002.1| GENE 43 43406 - 43819 701 137 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628591|ref|YP_821210.1| 50S ribosomal protein L16 [Streptococcus thermophilus LMD-9] # 1 137 1 137 137 274 98 7e-73 MLVPKRVKHRREFRGKMRGEAKGGKEVAFGEYGLQATTSHWITNRQIEAARIAMTRYMKR GGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKVMFEIAGVSEEVAREALRL ASHKLPVKTKFVKREAE >gi|304427513|gb|AEEM01000002.1| GENE 44 43829 - 44035 318 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|24380361|ref|NP_722316.1| 50S ribosomal protein L29 [Streptococcus mutans UA159] # 1 68 1 68 69 127 97 2e-28 MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLDQTARLNEVKKQIARV KTVQSEKK >gi|304427513|gb|AEEM01000002.1| GENE 45 44063 - 44323 430 86 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628589|ref|YP_821208.1| 30S ribosomal protein S17 [Streptococcus thermophilus LMD-9] # 1 86 1 86 86 170 100 2e-41 MERNQRKTLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIV RIMETRPLSATKRFRLVEVVEEAVII >gi|304427513|gb|AEEM01000002.1| GENE 46 44348 - 44716 598 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|195977218|ref|YP_002122462.1| 50S ribosomal protein L14 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 122 1 122 122 234 98 6e-61 MIQQETRLKVADNSGAREILTIKVLGGSGRKFANIGDVIVASVKQATPGGAVKKGDVVKA VVVRTKSGARRPDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGFMKIVSLAPE VL >gi|304427513|gb|AEEM01000002.1| GENE 47 44796 - 45101 502 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|24380358|ref|NP_722313.1| 50S ribosomal protein L24 [Streptococcus mutans UA159] # 1 101 1 101 101 197 98 8e-50 MFVKKGDKVRVIAGKDKGVEAVVLKALPKVNKVVVEGVAIVKKHQKPNNENPQGAIVEKE APIHVSNVQVLDKNGVAGRVGYKVVDGKKVRYNKKSGEVLD >gi|304427513|gb|AEEM01000002.1| GENE 48 45130 - 45672 878 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|195977220|ref|YP_002122464.1| 50S ribosomal protein L5 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 180 1 180 180 342 96 2e-93 MVNRLKEKYTNEVVPALTEKFNYTSVMAVPKVEKIVLNMGVGDAVNNSKNLEKAAAELAL ISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVTVSLPRVRDFHGVPT KSFDGRGNYTLGVKEQLIFPEINFDDVDKVRGLDIVIVTTANTDEEGRELLKGLGMPFAK >gi|304427513|gb|AEEM01000002.1| GENE 49 45690 - 45875 323 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477968|ref|ZP_04062579.1| ribosomal protein S14p/S29e [Streptococcus salivarius SK126] # 1 61 1 61 61 129 96 5e-29 MAKKSMIAKNHRPAKFSTQAYTRCERCGRPHSVYRKFKLCRVCFRELAYKGQIPGVTKAS W >gi|304427513|gb|AEEM01000002.1| GENE 50 46082 - 46480 657 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477967|ref|ZP_04062578.1| ribosomal protein S8 [Streptococcus salivarius SK126] # 1 132 1 132 132 257 99 9e-68 MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIAEILKREGFVKNVEVIEDDKQGII RVFLKYGQNGERVITNLKRISKPGLRVYAKREDVPKVLNGLGIAIISTSEGLLTDKEARQ KNVGGEVIAYVW >gi|304427513|gb|AEEM01000002.1| GENE 51 46624 - 47160 858 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478090|ref|ZP_04062701.1| ribosomal protein L6 [Streptococcus salivarius SK126] # 1 178 1 178 178 335 93 4e-91 MSRIGNKVINLPAGVEVTNNDNVVTVKGPKGELTREFNKNIEIKVEGTEVSLHRPNDSKE MKTIHGTARANLNNMVVGVSEGFKKELEMRGVGYRAQLQGSKLVLSVGKSHQDEVEAPEG VSFEVPSATTIVVNGINKEVVGQTAAYIRSLRAPEPYKGKGIRYVGEYVRRKEGKTGK >gi|304427513|gb|AEEM01000002.1| GENE 52 47255 - 47620 590 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|195977224|ref|YP_002122468.1| 50S ribosomal protein L18 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 121 1 121 121 231 98 5e-60 MKIVISKPDKNKIRQKRHRRVRGKLSGTADRPRLNVFRSNTGIYAQVIDDVAGVTLASAS TLDKEVSKGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHGRVKALADSARENGLK F >gi|304427513|gb|AEEM01000002.1| GENE 53 47639 - 48133 778 164 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157151183|ref|YP_001451218.1| 30S ribosomal protein S5 [Streptococcus gordonii str. Challis substr. CH1] # 1 164 1 164 164 304 98 8e-82 MAFKDNAVELEERVVAINRVTKVVKGGRRLRFAALVVVGDRNGRVGFGTGKAQEVPEAIR KAVEDAKKNLIEVPMVGTTIPHEVRSEFGGAKVLLKPAVEGAGVAAGGAVRAVIELAGVA DVTSKSLGSNTPINIVRATVEGLKQLKRAEDVAALRGISVSDLA >gi|304427513|gb|AEEM01000002.1| GENE 54 48148 - 48330 270 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|125717004|ref|YP_001034137.1| 50S ribosomal protein L30 [Streptococcus sanguinis SK36] # 1 60 1 60 60 108 90 7e-23 MAQIKITLTKSPIGRIPAQRKTVAALGLGKLNSSVIKEDTPAIRGMVTAVSHLVTVEDVK >gi|304427513|gb|AEEM01000002.1| GENE 55 48469 - 48909 705 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22536262|ref|NP_687113.1| 50S ribosomal protein L15 [Streptococcus agalactiae 2603V/R] # 1 146 1 146 146 276 95 2e-73 MKLHELKPAEGSRKVRNRVGRGTSSGNGKTAGRGQKGQKARSGGKVRLGFEGGQTPLFRR MPKRGFLNINAKEYALVNLDQLNVFEDGTEVTPVVLKEAGIIRAEKSGVKVLGNGELTKK LTVKAAKFSKSAEAAITAKGGSIEVI >gi|304427513|gb|AEEM01000002.1| GENE 56 48925 - 50229 722 434 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 11 434 19 441 447 282 35 3e-75 MFFKLLKDALKVKNVRNKIFFTLFIILVFRIGTHITVPGINAKSLEQLGELPFLNMLNLV SGNAMSNFSVFSMGVSPYITASIIVQLLQMDILPKFVEWSKQGEVGRRKLNQATRYISLV LAFVQSIGITAGFNTLSSISLVSTPNVKTYLLIGALLTTGSMIVTWLGEQITDKGFGNGV SMIIFAGIISSIPNAISTIYEDFFVNVRSSDLLSSYIFVALLIVAVLAIVFFTTFVQQAE YKIPIQYTKLVQGAPTSSYLPLKINPAGVIPVIFASSITTIPSTIIPLISNGKDIPWLTT LESFLNYQTPSGMVVYAVLIILFSFFYTFVQVNPEKTAENLQKGASYIPSVRPGRETEEY MSSLLKKLATVGSIFLAFISLTPIIAQQAMNLSSSIALGGTSLLILISTGIEGMKQLEGY LLKRQYVGFMNTAE >gi|304427513|gb|AEEM01000002.1| GENE 57 50326 - 50967 1001 213 aa, chain + ## HITS:1 COG:SPy0074 KEGG:ns NR:ns ## COG: SPy0074 COG0563 # Protein_GI_number: 15674308 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Streptococcus pyogenes M1 GAS # 1 213 1 212 212 349 83.0 2e-96 MNLLIMGLPGAGKGTQAAKIVEKFGVAHISTGDMFRAAMANKTEMGVLAKSFIDKGELVP DEVTNGIVKERLAQDDIAEKGFLLDGYPRTIEQAHALDETLSNLDLKLDGVINIEVNPES LIERLSGRIINRKTGETFHKVFNPPVGDYNEDDFYQREDDKPETVKRRLDVNIAQGAPII EHYRKAGIVFDVQGNQDIDDVFADIVKAISSLK >gi|304427513|gb|AEEM01000002.1| GENE 58 51086 - 51304 347 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 138 93 8e-32 MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPY DLTRGRITYRFK >gi|304427513|gb|AEEM01000002.1| GENE 59 51330 - 51446 206 38 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674310|ref|NP_268483.1| 50S ribosomal protein L36 [Streptococcus pyogenes M1 GAS] # 1 38 1 38 38 84 97 2e-15 MKVRPSVKPICEYCKVIRRNGRVMVICPSNPKHKQRQG >gi|304427513|gb|AEEM01000002.1| GENE 60 51465 - 51830 589 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|146317753|ref|YP_001197465.1| 30S ribosomal protein S13 [Streptococcus suis 05ZYH33] # 1 121 1 121 121 231 97 7e-60 MARIAGVDIPNEKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTSDQEDAIRREV DAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKK K >gi|304427513|gb|AEEM01000002.1| GENE 61 51848 - 52231 633 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|24380344|ref|NP_722299.1| 30S ribosomal protein S11 [Streptococcus mutans UA159] # 1 127 1 127 127 248 97 5e-65 MAKPTRKRRVKKNIESGVAHIHATFNNTIVMITDVHGNAIAWSSAGALGFKGSRKSTPFA AQMAAEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTSIRDVTPVPHNGAR PPKRRRV >gi|304427513|gb|AEEM01000002.1| GENE 62 52280 - 53218 1353 312 aa, chain + ## HITS:1 COG:SPy0080 KEGG:ns NR:ns ## COG: SPy0080 COG0202 # Protein_GI_number: 15674313 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Streptococcus pyogenes M1 GAS # 1 312 1 312 312 558 96.0 1e-159 MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL HEFDTIPGVREDVMQIILNIKGLAVKSYVDDEKIIELDVEGPAEVTAGDILTDSDVEIVN PDHYLFTIAEGHSLKATMTVAKKRGYVPAEGNKKEDAPVGTLAVDSIYTPVKKVNYQVEP ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKNTDVMKETEK VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK LADLGLGLKNDK >gi|304427513|gb|AEEM01000002.1| GENE 63 53233 - 53619 613 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|125717013|ref|YP_001034146.1| 50S ribosomal protein L17 [Streptococcus sanguinis SK36] # 1 128 1 128 128 240 96 1e-62 MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTVEKMITLGKRGDLHARR QAAAFVRNEIASENFDEATEKYTSQTALQKLFDEIAPRYAERNGGYTRILKTEPRRGDAA PMAIIELV Prediction of potential genes in microbial genomes Time: Sun May 29 12:14:03 2011 Seq name: gi|304427355|gb|AEEM01000003.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00013, whole genome shotgun sequence Length of sequence - 162984 bp Number of predicted genes - 153, with homology - 151 Number of transcription units - 70, operones - 37 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 12 - 92 65.0 # Tyr GTA 0 0 + TRNA 97 - 167 53.0 # Trp CCA 0 0 + TRNA 179 - 251 61.3 # His GTG 0 0 + TRNA 262 - 333 64.6 # Gln TTG 0 0 + TRNA 341 - 424 70.3 # Leu CAA 0 0 + Prom 850 - 909 9.1 1 1 Op 1 . + CDS 931 - 1779 962 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase + Term 1782 - 1819 3.4 2 1 Op 2 3/0.080 + CDS 1855 - 2301 507 ## COG1846 Transcriptional regulators 3 1 Op 3 42/0.000 + CDS 2298 - 3008 231 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 4 1 Op 4 . + CDS 2998 - 3816 931 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 3821 - 3847 -0.6 - Term 3845 - 3876 2.5 5 2 Tu 1 . - CDS 3892 - 5148 699 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 5231 - 5290 6.7 + Prom 5118 - 5177 4.4 6 3 Tu 1 . + CDS 5308 - 7632 2371 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 7723 - 7772 2.2 + Prom 7861 - 7920 3.6 7 4 Op 1 58/0.000 + CDS 7975 - 11547 845 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 + Prom 11563 - 11622 4.1 8 4 Op 2 1/0.240 + CDS 11725 - 15363 4626 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 15391 - 15440 11.1 + Prom 15455 - 15514 8.8 9 5 Op 1 2/0.120 + CDS 15534 - 15902 177 ## COG4699 Uncharacterized protein conserved in bacteria 10 5 Op 2 24/0.000 + CDS 15973 - 16914 1268 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 11 5 Op 3 6/0.040 + CDS 16790 - 17881 593 ## COG1459 Type II secretory pathway, component PulF 12 5 Op 4 6/0.040 + CDS 17881 - 18174 443 ## COG4537 Competence protein ComGC 13 5 Op 5 . + CDS 18158 - 18589 232 ## COG2165 Type II secretory pathway, pseudopilin PulG 14 5 Op 6 . + CDS 18618 - 18836 303 ## GALLO_0091 hypothetical protein 15 5 Op 7 . + CDS 18796 - 19257 307 ## COG4940 Competence protein ComGF 16 5 Op 8 . + CDS 19211 - 19543 307 ## GALLO_0093 hypothetical protein + Term 19547 - 19582 1.1 17 6 Op 1 7/0.000 + CDS 19616 - 20572 1113 ## COG0827 Adenine-specific DNA methylase 18 6 Op 2 . + CDS 20625 - 21824 1491 ## COG0282 Acetate kinase + Term 21848 - 21895 10.2 + Prom 21886 - 21945 9.1 19 7 Op 1 . + CDS 21986 - 22186 248 ## COG1476 Predicted transcriptional regulators 20 7 Op 2 . + CDS 22196 - 22405 230 ## GALLO_0097 hypothetical protein 21 7 Op 3 . + CDS 22418 - 22870 350 ## GALLO_0098 hypothetical protein 22 7 Op 4 . + CDS 22882 - 23520 506 ## COG1266 Predicted metal-dependent membrane protease + Term 23528 - 23598 17.7 - Term 23525 - 23578 17.4 23 8 Op 1 1/0.240 - CDS 23580 - 24320 1008 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 24342 - 24401 2.0 24 8 Op 2 . - CDS 24411 - 25478 1241 ## COG1363 Cellulase M and related proteins - Prom 25557 - 25616 8.5 25 9 Op 1 2/0.120 + CDS 25881 - 26198 445 ## COG0526 Thiol-disulfide isomerase and thioredoxins 26 9 Op 2 . + CDS 26207 - 26833 831 ## COG0073 EMAP domain + Term 26865 - 26916 13.7 - Term 26859 - 26898 2.2 27 10 Tu 1 . - CDS 27032 - 27625 609 ## COG0500 SAM-dependent methyltransferases - Prom 27648 - 27707 6.1 + Prom 27595 - 27654 5.1 28 11 Tu 1 . + CDS 27737 - 28132 600 ## COG0629 Single-stranded DNA-binding protein + Term 28142 - 28180 6.1 + Prom 28152 - 28211 5.3 29 12 Op 1 10/0.000 + CDS 28282 - 29325 1092 ## COG2391 Predicted transporter component 30 12 Op 2 . + CDS 29328 - 29555 347 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 29578 - 29613 3.0 + Prom 29564 - 29623 5.4 31 13 Op 1 . + CDS 29683 - 30483 794 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 30510 - 30545 1.1 + Prom 30488 - 30547 5.1 32 13 Op 2 . + CDS 30682 - 34587 4023 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 34609 - 34656 9.7 + Prom 34650 - 34709 8.2 33 14 Op 1 1/0.240 + CDS 34752 - 35717 849 ## COG1879 ABC-type sugar transport system, periplasmic component 34 14 Op 2 19/0.000 + CDS 35717 - 37033 1263 ## COG4585 Signal transduction histidine kinase 35 14 Op 3 1/0.240 + CDS 37030 - 37713 631 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 36 14 Op 4 1/0.240 + CDS 37706 - 39007 1235 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 39012 - 39054 6.4 + Prom 39093 - 39152 4.5 37 15 Op 1 9/0.000 + CDS 39173 - 39601 594 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 38 15 Op 2 13/0.000 + CDS 39620 - 40114 701 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB + Term 40125 - 40164 3.7 39 15 Op 3 13/0.000 + CDS 40191 - 41039 1112 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 40 15 Op 4 . + CDS 41041 - 41874 1146 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 41 15 Op 5 . + CDS 41902 - 42186 383 ## GALLO_0121 putative PTS associated protein + Term 42275 - 42319 4.1 + Prom 42668 - 42727 3.8 42 16 Op 1 13/0.000 + CDS 42782 - 44758 2376 ## COG4120 ABC-type uncharacterized transport system, permease component 43 16 Op 2 . + CDS 44758 - 45561 180 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 45572 - 45626 13.2 + Prom 45621 - 45680 9.7 44 17 Op 1 41/0.000 + CDS 45774 - 46058 492 ## COG0234 Co-chaperonin GroES (HSP10) 45 17 Op 2 . + CDS 46126 - 47754 1589 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 47782 - 47822 8.4 + Prom 47815 - 47874 7.6 46 18 Tu 1 . + CDS 47929 - 48804 804 ## COG1396 Predicted transcriptional regulators - Term 48790 - 48845 1.6 47 19 Tu 1 . - CDS 48878 - 48940 93 ## - Prom 48962 - 49021 9.9 48 20 Tu 1 . + CDS 49745 - 49825 61 ## + Term 49833 - 49859 -0.6 + Prom 49865 - 49924 6.6 49 21 Tu 1 . + CDS 49950 - 51569 1704 ## GALLO_0127 hypothetical protein + Term 51611 - 51663 7.2 - Term 51598 - 51651 8.2 50 22 Op 1 . - CDS 51660 - 52520 453 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Term 52534 - 52576 1.5 51 22 Op 2 . - CDS 52578 - 52775 309 ## GALLO_0129 hypothetical protein - Prom 52925 - 52984 7.8 + Prom 52833 - 52892 7.8 52 23 Op 1 1/0.240 + CDS 52961 - 55285 2800 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 53 23 Op 2 18/0.000 + CDS 55337 - 55489 253 ## PROTEIN SUPPORTED gi|22538200|ref|NP_689051.1| 50S ribosomal protein L33 54 23 Op 3 46/0.000 + CDS 55561 - 55737 331 ## COG0690 Preprotein translocase subunit SecE + Term 55750 - 55790 1.5 + Prom 55827 - 55886 7.8 55 23 Op 4 . + CDS 55937 - 56476 835 ## COG0250 Transcription antiterminator + Term 56522 - 56560 1.5 - Term 56510 - 56548 4.5 56 24 Tu 1 . - CDS 56566 - 57279 574 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Prom 57096 - 57155 7.5 57 25 Tu 1 . + CDS 57388 - 58233 964 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily + Term 58280 - 58319 -0.9 + Prom 58282 - 58341 5.3 58 26 Tu 1 . + CDS 58366 - 60867 3224 ## COG0495 Leucyl-tRNA synthetase + Term 60986 - 61018 4.7 + Prom 61039 - 61098 8.5 59 27 Tu 1 . + CDS 61123 - 62154 328 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase + Term 62174 - 62222 6.6 + Prom 62160 - 62219 8.4 60 28 Tu 1 . + CDS 62371 - 62595 258 ## GALLO_0138 hypothetical protein + Term 62617 - 62660 3.3 - Term 62613 - 62642 -0.3 61 29 Tu 1 . - CDS 62653 - 63234 413 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 63348 - 63407 4.4 + Prom 63307 - 63366 7.7 62 30 Tu 1 . + CDS 63408 - 64142 750 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 64237 - 64277 4.1 - TRNA 64276 - 64351 78.3 # Lys CTT 0 0 63 31 Op 1 2/0.120 - CDS 64667 - 65935 999 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 64 31 Op 2 . - CDS 65925 - 66419 362 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 66441 - 66500 7.7 + Prom 66394 - 66453 9.5 65 32 Tu 1 . + CDS 66483 - 66953 621 ## GALLO_0144 hypothetical protein + Prom 66963 - 67022 5.3 66 33 Op 1 . + CDS 67148 - 67621 441 ## GALLO_0145 putative acetyltransferase, GNAT family 67 33 Op 2 9/0.000 + CDS 67684 - 68637 1386 ## PROTEIN SUPPORTED gi|228477939|ref|ZP_04062552.1| ribosomal protein L11 methyltransferase 68 33 Op 3 . + CDS 68638 - 69381 862 ## COG1385 Uncharacterized protein conserved in bacteria + Term 69414 - 69449 2.0 + Prom 69458 - 69517 8.4 69 34 Op 1 7/0.000 + CDS 69544 - 70560 924 ## COG1609 Transcriptional regulators + Term 70580 - 70604 -1.0 + Prom 70627 - 70686 7.4 70 34 Op 2 1/0.240 + CDS 70826 - 73009 3002 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 73061 - 73102 4.1 + Prom 73021 - 73080 4.3 71 35 Tu 1 . + CDS 73113 - 73928 743 ## COG3568 Metal-dependent hydrolase + Term 73959 - 74010 8.1 - Term 74238 - 74272 2.1 72 36 Op 1 . - CDS 74293 - 75330 1251 ## COG1363 Cellulase M and related proteins 73 36 Op 2 . - CDS 75438 - 75917 444 ## COG1780 Protein involved in ribonucleotide reduction - Prom 76138 - 76197 10.5 + Prom 76038 - 76097 7.0 74 37 Op 1 8/0.000 + CDS 76166 - 76480 495 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 75 37 Op 2 . + CDS 76497 - 76817 470 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 76827 - 76853 0.3 - Term 77257 - 77293 4.0 76 38 Tu 1 . - CDS 77426 - 78826 1712 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 78856 - 78915 9.1 + Prom 78892 - 78951 12.2 77 39 Op 1 1/0.240 + CDS 78977 - 80245 1428 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 78 39 Op 2 1/0.240 + CDS 80298 - 81023 730 ## COG2188 Transcriptional regulators + Term 81028 - 81064 5.1 79 39 Op 3 . + CDS 81099 - 82049 1226 ## COG1482 Phosphomannose isomerase + Term 82075 - 82122 13.1 - Term 82339 - 82365 0.3 80 40 Op 1 12/0.000 - CDS 82375 - 82776 542 ## COG0853 Aspartate 1-decarboxylase 81 40 Op 2 19/0.000 - CDS 82789 - 83631 919 ## COG0414 Panthothenate synthetase 82 40 Op 3 . - CDS 83655 - 84482 891 ## COG0413 Ketopantoate hydroxymethyltransferase - Prom 84535 - 84594 13.0 - Term 84575 - 84624 9.8 83 41 Tu 1 . - CDS 84668 - 86131 1825 ## COG2730 Endoglucanase - Prom 86245 - 86304 6.4 + Prom 86558 - 86617 11.8 84 42 Op 1 35/0.000 + CDS 86669 - 87961 1620 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 87990 - 88026 0.6 + Prom 87973 - 88032 1.9 85 42 Op 2 38/0.000 + CDS 88075 - 88959 838 ## COG1175 ABC-type sugar transport systems, permease components 86 42 Op 3 . + CDS 88959 - 89786 801 ## COG0395 ABC-type sugar transport system, permease component 87 42 Op 4 . + CDS 89820 - 90404 185 ## GALLO_0166 hypothetical protein 88 42 Op 5 . + CDS 90401 - 92632 2057 ## COG3345 Alpha-galactosidase 89 42 Op 6 1/0.240 + CDS 92690 - 93421 844 ## COG2188 Transcriptional regulators 90 42 Op 7 1/0.240 + CDS 93455 - 94318 261 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 91 42 Op 8 . + CDS 94327 - 94965 803 ## COG2755 Lysophospholipase L1 and related esterases 92 42 Op 9 . + CDS 94981 - 95937 937 ## COG3458 Acetyl esterase (deacetylase) + Term 95950 - 96003 7.0 + Prom 96133 - 96192 5.9 93 43 Op 1 7/0.000 + CDS 96215 - 98434 2333 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 98451 - 98485 1.3 94 43 Op 2 . + CDS 98494 - 98937 505 ## COG1490 D-Tyr-tRNAtyr deacylase + Prom 98940 - 98999 5.0 95 43 Op 3 4/0.040 + CDS 99026 - 99874 635 ## COG2508 Regulator of polyketide synthase expression + Term 99875 - 99909 0.1 + Prom 99893 - 99952 5.8 96 44 Tu 1 . + CDS 99975 - 101108 1605 ## COG3839 ABC-type sugar transport systems, ATPase components + Term 101141 - 101195 9.9 - Term 101190 - 101226 6.1 97 45 Tu 1 . - CDS 101435 - 102205 834 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 102248 - 102307 15.7 98 46 Op 1 4/0.040 + CDS 102513 - 102938 657 ## COG0698 Ribose 5-phosphate isomerase RpiB 99 46 Op 2 3/0.080 + CDS 102955 - 103470 632 ## COG0698 Ribose 5-phosphate isomerase RpiB 100 46 Op 3 3/0.080 + CDS 103482 - 104414 985 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 101 46 Op 4 . + CDS 104421 - 105398 1396 ## COG3684 Tagatose-1,6-bisphosphate aldolase 102 46 Op 5 13/0.000 + CDS 105411 - 105884 445 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 103 46 Op 6 10/0.000 + CDS 105898 - 106200 566 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 104 46 Op 7 . + CDS 106236 - 107636 1633 ## COG3775 Phosphotransferase system, galactitol-specific IIC component + Term 107692 - 107740 7.4 + Prom 107660 - 107719 4.8 105 47 Tu 1 . + CDS 107746 - 108642 881 ## COG2017 Galactose mutarotase and related enzymes + Term 108767 - 108823 8.8 + Prom 108666 - 108725 7.1 106 48 Op 1 2/0.120 + CDS 108847 - 109683 837 ## COG3711 Transcriptional antiterminator 107 48 Op 2 2/0.120 + CDS 109694 - 111094 1499 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 108 48 Op 3 13/0.000 + CDS 111107 - 111418 481 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Prom 111471 - 111530 3.1 109 48 Op 4 . + CDS 111660 - 113339 1970 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 110 48 Op 5 . + CDS 113370 - 114980 1508 ## COG3867 Arabinogalactan endo-1,4-beta-galactosidase + Term 114998 - 115035 8.1 - Term 115033 - 115067 0.4 111 49 Tu 1 . - CDS 115076 - 115909 640 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 115930 - 115989 3.6 + Prom 115940 - 115999 5.1 112 50 Op 1 1/0.240 + CDS 116020 - 118197 2153 ## COG3345 Alpha-galactosidase 113 50 Op 2 35/0.000 + CDS 118194 - 119465 1242 ## COG1653 ABC-type sugar transport system, periplasmic component 114 50 Op 3 38/0.000 + CDS 119478 - 120344 1038 ## COG1175 ABC-type sugar transport systems, permease components 115 50 Op 4 4/0.040 + CDS 120357 - 121190 811 ## COG0395 ABC-type sugar transport system, permease component + Prom 121378 - 121437 5.5 116 51 Op 1 7/0.000 + CDS 121579 - 123024 1761 ## COG0366 Glycosidases + Term 123035 - 123066 -0.8 + Prom 123059 - 123118 8.1 117 51 Op 2 . + CDS 123143 - 124753 1315 ## COG0366 Glycosidases + Term 124764 - 124816 16.2 - Term 124752 - 124799 10.4 118 52 Tu 1 . - CDS 124800 - 125807 1088 ## COG1609 Transcriptional regulators - Prom 125827 - 125886 8.7 + Prom 125866 - 125925 4.7 119 53 Op 1 4/0.040 + CDS 125958 - 127130 1712 ## COG0153 Galactokinase 120 53 Op 2 4/0.040 + CDS 127150 - 128619 1571 ## COG4468 Galactose-1-phosphate uridyltransferase 121 53 Op 3 . + CDS 128629 - 129627 1335 ## COG1087 UDP-glucose 4-epimerase + Term 129634 - 129675 10.1 122 54 Op 1 . + CDS 129687 - 130556 729 ## COG0456 Acetyltransferases + Prom 130567 - 130626 5.7 123 54 Op 2 2/0.120 + CDS 130652 - 131023 587 ## COG1862 Preprotein translocase subunit YajC + Term 131032 - 131066 2.0 + Prom 131093 - 131152 3.7 124 55 Op 1 32/0.000 + CDS 131177 - 131926 867 ## COG0020 Undecaprenyl pyrophosphate synthase 125 55 Op 2 12/0.000 + CDS 131939 - 132733 1010 ## COG0575 CDP-diglyceride synthetase + Term 132753 - 132784 -0.2 + Prom 132754 - 132813 4.2 126 55 Op 3 7/0.000 + CDS 132834 - 134096 1400 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Term 134191 - 134242 6.2 + Prom 134133 - 134192 7.7 127 55 Op 4 5/0.040 + CDS 134273 - 136114 2595 ## COG0442 Prolyl-tRNA synthetase + Term 136116 - 136163 2.6 + Prom 136136 - 136195 5.6 128 56 Tu 1 . + CDS 136293 - 140687 4533 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) + Term 140710 - 140769 5.7 + Prom 140722 - 140781 4.7 129 57 Tu 1 . + CDS 140801 - 141253 327 ## COG1846 Transcriptional regulators + Prom 141267 - 141326 5.6 130 58 Tu 1 . + CDS 141359 - 141904 772 ## COG0431 Predicted flavoprotein + Term 141924 - 141968 6.0 - Term 141912 - 141956 1.4 131 59 Tu 1 . - CDS 142030 - 142263 186 ## GALLO_0212 hypothetical protein - Prom 142322 - 142381 7.8 - Term 142482 - 142526 6.5 132 60 Op 1 . - CDS 142535 - 143149 1033 ## COG0242 N-formylmethionyl-tRNA deformylase 133 60 Op 2 . - CDS 143217 - 143861 678 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 143907 - 143966 9.5 + Prom 143869 - 143928 5.8 134 61 Op 1 2/0.120 + CDS 143955 - 145115 889 ## COG0477 Permeases of the major facilitator superfamily 135 61 Op 2 . + CDS 145128 - 145982 631 ## COG1737 Transcriptional regulators + Term 146217 - 146248 -0.7 136 62 Op 1 . - CDS 146102 - 146485 540 ## COG0346 Lactoylglutathione lyase and related lyases 137 62 Op 2 . - CDS 146503 - 147348 1013 ## COG0561 Predicted hydrolases of the HAD superfamily 138 63 Tu 1 . + CDS 147662 - 147931 456 ## PROTEIN SUPPORTED gi|228476469|ref|ZP_04061159.1| ribosomal protein S15 + Term 147946 - 147997 8.4 + Prom 148110 - 148169 7.6 139 64 Tu 1 . + CDS 148416 - 151097 3845 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 151128 - 151166 9.5 + Prom 151155 - 151214 5.7 140 65 Op 1 . + CDS 151323 - 151523 150 ## GALLO_0221 predicted membrane protein 141 65 Op 2 . + CDS 151536 - 151769 370 ## COG2261 Predicted membrane protein + Term 151779 - 151824 10.0 + Prom 151817 - 151876 5.7 142 66 Op 1 . + CDS 151973 - 154156 203 ## PROTEIN SUPPORTED gi|228478187|ref|ZP_04062795.1| 30S ribosomal protein S1 homolog 143 66 Op 2 . + CDS 154200 - 154955 930 ## GALLO_0224 hypothetical protein 144 66 Op 3 4/0.040 + CDS 154971 - 155588 921 ## COG1045 Serine acetyltransferase 145 66 Op 4 8/0.000 + CDS 155647 - 156993 1492 ## COG0215 Cysteinyl-tRNA synthetase 146 66 Op 5 7/0.000 + CDS 156986 - 157390 331 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 + Term 157410 - 157444 4.0 147 66 Op 6 6/0.040 + CDS 157453 - 158202 562 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 148 66 Op 7 1/0.240 + CDS 158236 - 158766 619 ## COG3688 Predicted RNA-binding protein containing a PIN domain + Term 158784 - 158840 2.1 + Prom 158807 - 158866 4.9 149 67 Tu 1 . + CDS 158929 - 159789 973 ## COG1307 Uncharacterized protein conserved in bacteria + Term 159798 - 159839 3.2 + Prom 159830 - 159889 3.7 150 68 Tu 1 . + CDS 159967 - 160593 500 ## COG1396 Predicted transcriptional regulators + Prom 160649 - 160708 4.6 151 69 Tu 1 . + CDS 160728 - 161684 972 ## COG1893 Ketopantoate reductase 152 70 Op 1 59/0.000 + CDS 161788 - 162333 818 ## PROTEIN SUPPORTED gi|94542786|gb|ABF32835.1| LSU ribosomal protein L13P 153 70 Op 2 . + CDS 162356 - 162748 650 ## PROTEIN SUPPORTED gi|195978841|ref|YP_002124085.1| 30S ribosomal protein S9 + Term 162775 - 162815 7.2 Predicted protein(s) >gi|304427355|gb|AEEM01000003.1| GENE 1 931 - 1779 962 282 aa, chain + ## HITS:1 COG:BS_yabH KEGG:ns NR:ns ## COG: BS_yabH COG1947 # Protein_GI_number: 16077114 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus subtilis # 1 282 1 282 289 263 44.0 2e-70 MAIIEKAPAKINLGLDIIGKRPDGYHDLSMIMVSVDLNDYITVSEIDGSEIVVESNNHKM PLNDKNDVFKAAKLIREICQIDSGVKIELKKSIPICAGLGGGSTDAAATIRALDKLWQLN LSKDEMIDVGFQIGSDVPYCLEAGCACISGKGEIVECLDYQLSAWVVLVKPEFGVSTRTV FPEIDCKTISRVDIASLREAVLAKDYEKMIAYMGNSLEDITIKRKPFIQKIKDRMMNCGA DVALMTGSGPTVYALCRSEKKADRLVNSMRGFCKEVYKVRIL >gi|304427355|gb|AEEM01000003.1| GENE 2 1855 - 2301 507 148 aa, chain + ## HITS:1 COG:SPy0092 KEGG:ns NR:ns ## COG: SPy0092 COG1846 # Protein_GI_number: 15674315 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 146 4 147 147 179 70.0 1e-45 MQLEKQVDKLVNQILLKAENQHELLFGDCQSGVAITNTQEHILMLLSQERLTNSDLAKRL NISQAAVTKAIKYLVSQGMLASVKNKEDARVTYFELTDIAKPVAKEHTHHHDATLAVYKN LFNQFSDDEQDVIARFLKVFSDELEGRE >gi|304427355|gb|AEEM01000003.1| GENE 3 2298 - 3008 231 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 4 202 5 200 311 93 31 5e-18 MRYITVEDLSFQYDSEPVLEGINYHLDSGEFVTLTGENGAAKSTLVKATLGILTPKSGQV TISKTNKEGKKLRIAYLPQQIASFNAGFPSTVYEFVKSGRYPRNGWFRRLTKHDDEHVKI SLESVGMWENRHKRIGSLSGGQKQRVVIARIFASDPDIFILDEPTTGMDAGTTETFYELM HHSAHKHGKSVLMITHDPDEVKHYADRNIHLIRNQKTPWRCFNVHGTDVKGAVDVD >gi|304427355|gb|AEEM01000003.1| GENE 4 2998 - 3816 931 272 aa, chain + ## HITS:1 COG:SPy0094 KEGG:ns NR:ns ## COG: SPy0094 COG1108 # Protein_GI_number: 15674317 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 2 270 1 269 271 267 76.0 2e-71 MLIEIFSYDFMQRAIMAVIAISIFAPILGIFLILRHQSLMSDTLSHVSLAGVALGILLGT STTWSTILVVTIAAVILEYLQTVYKHYVEISTAILMSLGLAISLIVTSKSENGSSVNLDQ YLFGSIITINMGQVIALFTIAIVVVLLTILFIRPMYILTFDEETAFVDGLPVRLMSVLFN IVTGIAIALTIPAAGALLVSTIMVLPASIAMRLGKNFKSVILIGVIVGFIGMVAGIITSY YWETPASATITVIFVGIFLLVNLFNMIFHRNS >gi|304427355|gb|AEEM01000003.1| GENE 5 3892 - 5148 699 418 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 7 388 13 388 418 273 39 3e-72 MNIFEELKERGLVFQTTDEEALVKALTEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQL AGHKPYALVGGATGLIGDPSFKDAERSLQTKETVDGWVTKIQNQLSRFLDFENGDNKAVM VNNYDWFGNVSFIDFLRDVGKYFTVNAMMSKESVKKRIETGISYTEFAYQIMQGYDFYEL NDKYNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVMTVPLITDSTGKKFGKSEGNAVWL DADKTSPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIAEIEKEFNAARHERLAQKILARE VVTLVHGEEAYKQALKITEQLFAGNIKSLSAKELKQGLNNVPNYAVQADDNRNIVEVLVA AKISPSKRQAREDVQNGAIYINGERIQDLAYTLSDDDKIDNELTVIRRGKKKYFVLTY >gi|304427355|gb|AEEM01000003.1| GENE 6 5308 - 7632 2371 774 aa, chain + ## HITS:1 COG:SPy0097 KEGG:ns NR:ns ## COG: SPy0097 COG0744 # Protein_GI_number: 15674320 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 1 759 5 762 770 1045 68.0 0 MFKRNKKKKKTNHQKLSVIDLGSVVLRTVKLLTDFFYIIIILFGMLGAGIAFGYLASQID SVKVPSKESLVSQVTSLTRISEMSYSDGSSIASIDTDLLRTPVESDAISDNVKKAIIATE DENFESHDGVVPKAVFRATLASVLGLGETSGGSTLTQQLIKQQILGDDPTFKRKSREIIY ALALERYLSKDEILTDYLNVSPFGRNNKGENIAGIEEAAQGIFGVSASDLTIPQAAFLAG LPQSPIVYSPYTAAGQLKDEEDMAYGLSRQQDVLYNMYRAGYLTKAEYEEYKAYDVSQDF IQPESTTTSEHDFLYYAVLEEAQDIMYDYLVEQNGVSEQELKNDSTKESYQKLALEALQQ GGYTIKTTIDKDVYNAMQNTVAQYGSTLDQGSSETVEVGNVLMDNSTGAILGFIGGRDYS TNQNNHAFDTARSPGSSIKPIIAYGIAIDQGLLGSASMLSNYPTTFSSGQSIMHGSEEGT AMVTLQEALNTSWNIPAYWTYQMLLNDDVDVESYMKKMGYDIDDYSIESLPLGGGIETTV LQQVNAYQMISNGGVYLKGYMVDSITDSQGNVIYQHKANPVRVFSEATASILNQLLKEVI TGGGTTKFYADLKSLNATAASADWTGKTGTTDNYTDVWLVLSTPKVTLGGWAGNDDNTSL PDAAGHTYNAQYMAYLVNAIYNADSSVLGVDKKYSLSSSVIKSTVLKATGLQPGTVTVNG RSLTVSGETTTSYWAKNGAGTMTYKFAIGGTDSDYTKAWESLLSNSSITTSSSN >gi|304427355|gb|AEEM01000003.1| GENE 7 7975 - 11547 845 1190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 885 1144 1078 1391 1392 330 54 3e-89 MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDNGLREVFEDVLPITNFTD TMELEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA YTRIDRTRKIPFTTLVRALGFSGDDEIMDIFGDSELVRNTIEKDIHKNPADSRTDEALKE IYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKINKKLNVKTRLLNQTIAENLV DAETGEILVEAGTVMTRDVIDSIAEQLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPVD PNRVVTIVGNANPDDKARALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL ANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSTYGH LNKYGFIQTPYRKVDRATGVVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH QGNNQEFPSNIVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPHAP YVGTGMEYQAAHDSGAAVIAKHDGRVVFSDAEKVEVRREDGSLDVYHITKFRRSNSGTAY NQRTLVKVGDIVEKGDFIADGPSMEKGEMALGQNPIVAYMTWDGYNYEDAVIMSERLVKE DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS RMNIGQVMELHLGMAARNLGIHIATPVFDGATSEDLWDTVREAGMDSDAKTVLYDGRTGE PFDNRVSVGIMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV LDEDDNEVELRDLDEGEDDDVMHVDDLEKARQKQETESAEKVEVSAEENK >gi|304427355|gb|AEEM01000003.1| GENE 8 11725 - 15363 4626 1212 aa, chain + ## HITS:1 COG:SPy0099 KEGG:ns NR:ns ## COG: SPy0099 COG0086 # Protein_GI_number: 15674322 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Streptococcus pyogenes M1 GAS # 1 1212 1 1213 1213 2296 94.0 0 MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGQGSFVAKMGAEAIQDLL KRVDLKSEIAELKEELKTATGQKRIKAVRRLDVLDAFYKSGNKPEWMVLNILPVIPPDLR PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR EMAIELFKPFVMREIVARDYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI LNPKDGKPVVTPSQDMVLGNYYLTMEEPGREGEGMIFKDRDEAVMAYRNGYVHLHTRVGI AVDSMPNKPWTDEQKHKILVTTVGKILFNDIMPEDLPYLQEPNNANLTEKTPDKYFLAPG QDIQSAIDSLEINVPFKKKNLGNIIAEIFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG IADIPVIDNKQEIIDAAHSKVEQINKAFRRGLMTDDDRYVAVTTTWREAKEELEQRLIET QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRAITDGKEVTETL EERLVGRYTKKSVKHPETGEVIVGPDVLITEDMAAEIVKAGVEEVTIRSVFTCNTRHGVC RHCYGVNLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE IFEARNPKGEAVITEVKGTVVDIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVAVGDE VHRGAPLTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK VRIMDPGDTELLPGTLMDIADFTDANKDVVISGGIPATSRPVLMGITKASLETNSFLSAA SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAVNELETSEEA ETVEATVSTDAE >gi|304427355|gb|AEEM01000003.1| GENE 9 15534 - 15902 177 122 aa, chain + ## HITS:1 COG:SPy0100 KEGG:ns NR:ns ## COG: SPy0100 COG4699 # Protein_GI_number: 15674323 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 109 1 109 121 105 47.0 3e-23 MYQVIKMYGDWEPWWFLKDWQKDIIEEKCFEYFEDAFSFYKTEWLSLKTTLPSCKCHDNL QAAFWDKTEQRWCENCGDYLQQYHSILMLKDGQELPEGTFSYHFNVQNDESRPRPQNCKL ES >gi|304427355|gb|AEEM01000003.1| GENE 10 15973 - 16914 1268 313 aa, chain + ## HITS:1 COG:SPy0101 KEGG:ns NR:ns ## COG: SPy0101 COG2804 # Protein_GI_number: 15674324 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Streptococcus pyogenes M1 GAS # 1 311 1 311 312 393 62.0 1e-109 MIQEKAKQLIKDAVEVNAQDIYILPREDCYEVYQRVGDQRQFVDYFELEQMTSLISHFKF VAGMNVGEKRRSQLGSCDYQFADEEEISLRLSSVGDYRGRESLVIRLLYSGRHDLQYWFD GMKNILEAIDSRGLYLFSGPVGSGKTTLMYQLVREKFPNKQVITIEDPVEIKQEQMLQLQ LNSDIGMTYDELIKLSLRHRPDILIIGEIRDSETARAVIRASLTGAVVFSTIHAKSIPGI YARLLELGVSQQELENSLRAIVYQRLIGGGGVIDFAKENFESHRPECWNTKIESLVKDGH ITAEQAKIEKIAI >gi|304427355|gb|AEEM01000003.1| GENE 11 16790 - 17881 593 363 aa, chain + ## HITS:1 COG:L0314 KEGG:ns NR:ns ## COG: L0314 COG1459 # Protein_GI_number: 15674104 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Lactococcus lactis # 13 360 6 354 357 299 50.0 7e-81 MILLKKTLKVTDQSAGIQKLKVLLKTDISQLNKQKSKKLPFKKQRKVIQLFNNLFESGFN LTEIVSFLRRSQLLLDIYVERMQESLLNGASLATMMADLGFSDNIVTQIALADVHGNSQK SLLKIESYLSSMTVVRKKLIEVATYPLILLLFLILIMLGLKNYLLPQLESQNVATQIITH FPTIFLLSIFSIGVLLVCATFYARRLSQIDLYSRISRIPLVGNYVRLYLTAYYAREWGNL IGQGIELMAIVGIMQKQKSLLFQEIGKDMEEALLSGQAFHQKVLGYPFFLRELSLMIEYG EVKSKLGRELDIYAEETWQSFFGKLTQATQLIQPLVFVFVALIIVLIYVAMLLPMYQNMG GNF >gi|304427355|gb|AEEM01000003.1| GENE 12 17881 - 18174 443 97 aa, chain + ## HITS:1 COG:SPy0103 KEGG:ns NR:ns ## COG: SPy0103 COG4537 # Protein_GI_number: 15674326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGC # Organism: Streptococcus pyogenes M1 GAS # 5 94 5 94 108 100 61.0 1e-21 MKKIWKKLRQKTVKGFTLVEMLIVLLIISVLMLLFVPNLSKQKDVVREKGDAAVVKVVES QMDLYEVKTGDKPTVDDLVEVGYITSEQAKTYNEAKK >gi|304427355|gb|AEEM01000003.1| GENE 13 18158 - 18589 232 143 aa, chain + ## HITS:1 COG:SP2050 KEGG:ns NR:ns ## COG: SP2050 COG2165 # Protein_GI_number: 15901870 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Streptococcus pneumoniae TIGR4 # 8 139 2 134 134 106 45.0 1e-23 MKLKNKTVSAFTLLESLLTLGISCFIIMMLSGSLNGIFQNVEEKIFFLSFENLYCDTQKL ANARQQSLTLTVSQEEVSTDFSTVKLPPSVKVDKTYQVNFDKAGGNSSLAKLTFQTSDKE VNYQLYLGSGKYKKTETKSLHTP >gi|304427355|gb|AEEM01000003.1| GENE 14 18618 - 18836 303 72 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0091 NR:ns ## KEGG: GALLO_0091 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 72 26 97 97 114 100.0 8e-25 MITSIVLGEIDKNRQSMQESLRQQEALNVATMAVQTGQNHLKMNGVEVEIIKKDGEVYVY EGKTEILHVKKD >gi|304427355|gb|AEEM01000003.1| GENE 15 18796 - 19257 307 153 aa, chain + ## HITS:1 COG:SPy0106 KEGG:ns NR:ns ## COG: SPy0106 COG4940 # Protein_GI_number: 15674329 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGF # Organism: Streptococcus pyogenes M1 GAS # 13 150 6 143 144 145 50.0 4e-35 MRGKRKYYTLKKTSLKAFTLIECLVSLLVISGAILVYNALTQSISANVHYLSENQEENWL LFSQQLRAELANCQLDKVENNKLYVTKSSQKLAFGQSKADDFRKTNASGQGYQPMIFGVK SSAISRDGQKVTMTLNLENGLERTFVYTFETAS >gi|304427355|gb|AEEM01000003.1| GENE 16 19211 - 19543 307 110 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0093 NR:ns ## KEGG: GALLO_0093 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 7 110 1 104 104 170 99.0 2e-41 MVWRGHLFTLLKRQVKAGILIYALLMAAIFALLLQFYLGRVVAMERQHQAQLSASQAYLM AELTRDLAKEDTGHLTFDQGVADYNFQDNQLQVVVKLPNQQEFDYVFQRA >gi|304427355|gb|AEEM01000003.1| GENE 17 19616 - 20572 1113 318 aa, chain + ## HITS:1 COG:SPy0108 KEGG:ns NR:ns ## COG: SPy0108 COG0827 # Protein_GI_number: 15674331 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Streptococcus pyogenes M1 GAS # 1 317 1 317 317 476 75.0 1e-134 MNFEKIETAYELILENIQLIENELKTHIYDALIEQNSFYLGAEGASEEVAANNEKLRQLA LTKEEWRRAFQFIFIKAGQTEQLQANHQFTPDAIGFILLFLIENLTDSDKIDLLEIGSGT GNLAQTLLNNSSKELNYLGIEVDDLLIDLSASIAEVMDSDAQFIQEDAVRPQILKESDVI ISDLPVGFYPNDDIAKRYKVASSDEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ SDLLKQWLKDYADIIAVITLPESIFGNAANAKSIFVLKKQAAHTPETFVYPLSDLQSREA LTDFIRKFQKWKVDNMNF >gi|304427355|gb|AEEM01000003.1| GENE 18 20625 - 21824 1491 399 aa, chain + ## HITS:1 COG:SP2044 KEGG:ns NR:ns ## COG: SP2044 COG0282 # Protein_GI_number: 15901865 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 395 1 395 396 559 68.0 1e-159 MAKTISINAGSSSLKWQLYNMPEEEVIAKGLIERIGLVNGVSTVKFNGQTKSETKDIPDH TAAVKILLDDLISMNIIASYDEITGVGHRVVAGGEYFKDSALVTDKVIQQVEELSMLAPL HNPGAALGIRAFKDLLPDITSVVVFDTAFHATMPEVAYRYPIANRYYTDYKIRKYGAHGT SHQYVAQEAAKVLGKPLEDLKLITCHIGNGVSVTAIKDGKSVDTSMGLTPLGGTMMGTRS GSIDPGVITYLLECEPNLDSPQKIRTVLNRDSGLLGISEKSSDMRDILAGKEEGDEKCQL AYDMYIDRLRKYIAQYFAVLNGADAIVFTAGIGENSSVVREDIISGMTWFGVDTDPAKNV SGAYGVISTDQARVKTMVIPTDEELVIARDVERFKNSTN >gi|304427355|gb|AEEM01000003.1| GENE 19 21986 - 22186 248 66 aa, chain + ## HITS:1 COG:PAB7155 KEGG:ns NR:ns ## COG: PAB7155 COG1476 # Protein_GI_number: 14520844 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pyrococcus abyssi # 1 65 1 65 73 66 53.0 1e-11 METKIQELRKANKISQAELAEALAVTRQTIISLEKGRYNASLELAHKIAKYFGKTIEEIF IFEDEK >gi|304427355|gb|AEEM01000003.1| GENE 20 22196 - 22405 230 69 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0097 NR:ns ## KEGG: GALLO_0097 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 69 1 69 69 73 100.0 3e-12 MNTLYETMKNSNHVTLKNIGLAMLSLGQLLLLTALVANLSDLLSGFLLAMSIMLNVLSIT FFQDKILGE >gi|304427355|gb|AEEM01000003.1| GENE 21 22418 - 22870 350 150 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0098 NR:ns ## KEGG: GALLO_0098 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 150 1 150 150 172 100.0 3e-42 MVLKALISLTRKKTLEEYRHYMMTVSLSFLFVAALCLLISFFIKTNDFAAGLLLGGGVAG LVVATYYLTLTRQPNRLKAAYIAAYDERNQFILRVTAISTLIFLFLENFMLIILYAFMGV VLTYPIVLLIWLYSLFLGFVFFKLIFTRIL >gi|304427355|gb|AEEM01000003.1| GENE 22 22882 - 23520 506 212 aa, chain + ## HITS:1 COG:SP0288 KEGG:ns NR:ns ## COG: SP0288 COG1266 # Protein_GI_number: 15900222 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 2 212 3 219 230 65 29.0 8e-11 MKKFLTALKYFFLALGLILLEQLPTAFITANQPFWQSVLITLALLVVAAFTVYVAKRVGL LNHLEELKTWQAWKTVLIGFVVLTVVEYIGKIILLLENGLGANTENQAALEQLGMSPFLL IVLTVIAAPIVEETVMRGLILGRTFNNSYFGVIISSLLFGLLHMPTNIGSWVIYGGMGMV FGIIYYKTQKLEYTIAIHFINNALGVLLMLLL >gi|304427355|gb|AEEM01000003.1| GENE 23 23580 - 24320 1008 246 aa, chain - ## HITS:1 COG:SPy0112 KEGG:ns NR:ns ## COG: SPy0112 COG0345 # Protein_GI_number: 15674334 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 246 11 256 256 315 71.0 6e-86 MATAIINGLNTTSHDIIISGSSLPRSREIAEQLEVEAALSHQELIDQSDLVILGIKPQMF ESVLAGLHFHQPILSMAAGVTLERLGKLTDPNLPLIRIMPNLNAQILKSTTAICTNDNVS AELLVTAKEITDSFGSTFDIPEKDFDTFTALAGSSPAYIYLFIEALAKAGVKYGIPKEKS LDIVTQTVLASAENLLQGSDSPHDLIDKISSPGGTTIAGLLDLEKTGLTASVISSIDATI DKAKAL >gi|304427355|gb|AEEM01000003.1| GENE 24 24411 - 25478 1241 355 aa, chain - ## HITS:1 COG:SPy0115 KEGG:ns NR:ns ## COG: SPy0115 COG1363 # Protein_GI_number: 15674335 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 355 1 355 355 636 84.0 0 MSELFSKIKEITELDSIAGYEHSVRNYLRSKITPLVDDVQTDGLGGIFGIKNSAAENAPR IMVAAHMDEVGFMVSDIKADGTMRAVGIGGWNPLVLSSQRFTLYTRDGRAIPVVSGSVPP HFLRGANGSAALPKIDDIIFDAGFTDKAEAESFGILPGDIIVPKSETILTANQKNVISKA WDNRFGVLMVTESLESLKGQELDNTLIAGANVQEEVGLRGAHVSATKFQPELFFAVDCSP AGDIYGNQGKIGDGTLFRFYDPGHIMLKDMRDFLLTTAEEAGIKYQYYAAKGGTDAGAAH LKNGGIPSTTIGVCARYIHSHQSLYAMDDFLQAQAFLQAIVKKLDRSTVDLIKKY >gi|304427355|gb|AEEM01000003.1| GENE 25 25881 - 26198 445 105 aa, chain + ## HITS:1 COG:SP1911 KEGG:ns NR:ns ## COG: SP1911 COG0526 # Protein_GI_number: 15901736 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pneumoniae TIGR4 # 1 105 1 105 105 141 60.0 3e-34 MISPKSYEEMATYLEKPEKVVFFFTANWCPDCQFIYPVMPEIEAENPEFTFVRVDRDDFM EVAQRWNIFGIPSFVVTENGKEIGRLVNKLRKTKAEINSFLAGLK >gi|304427355|gb|AEEM01000003.1| GENE 26 26207 - 26833 831 208 aa, chain + ## HITS:1 COG:SP1910 KEGG:ns NR:ns ## COG: SP1910 COG0073 # Protein_GI_number: 15901735 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Streptococcus pneumoniae TIGR4 # 1 206 1 206 208 317 76.0 1e-86 MIFTYNKEHVGDVLMVIVKDSKGAKLDYERKGNVSRVFLEKNGETVAWNIFEVSSLVTIE GVGQVTLSDQDVATLNAELAKEGFAEQLENDPSPKFVVGQIKEMVAHPDSDHLNICQVQI SDDKTVQIVAGAPNAAVGLKTIVALPGAMMPNGSLIFPGALRGEKSFGMMCSPRELALPN APQKRGIIELDDTAVVGEAFNPEKHWKG >gi|304427355|gb|AEEM01000003.1| GENE 27 27032 - 27625 609 197 aa, chain - ## HITS:1 COG:CAC2574 KEGG:ns NR:ns ## COG: CAC2574 COG0500 # Protein_GI_number: 15895834 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 4 156 14 165 257 135 43.0 4e-32 MTVNINAYKEWSQQPWGKIMYRLIFAQLNHIKNKQVLDFGAGFGTTSHYLSQNNTVTAIE PNADMLFADDTQTFTKINGSLEVLKNLPEQSFDVIICHNVFEYIDKSLHQKYLGEFERLL KPNGELSLIKHNLTGKVLHQVIFNNNIEDALHLLEGKDSYNSSSFGHGETYSIDELTSKT NLTLENYQGLRTPTKRF >gi|304427355|gb|AEEM01000003.1| GENE 28 27737 - 28132 600 131 aa, chain + ## HITS:1 COG:L0299 KEGG:ns NR:ns ## COG: L0299 COG0629 # Protein_GI_number: 15672374 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Lactococcus lactis # 3 131 2 129 129 141 58.0 3e-34 MYNKVIIIGRLTAQPELVTTSNEKSVTRVTLAVNRRFKSQNGEREADFISVVVWGRLAET LVSYAGKGSLLSVDGELRTRKYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLA DLVLEEEELPF >gi|304427355|gb|AEEM01000003.1| GENE 29 28282 - 29325 1092 347 aa, chain + ## HITS:1 COG:SA1850 KEGG:ns NR:ns ## COG: SA1850 COG2391 # Protein_GI_number: 15927620 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Staphylococcus aureus N315 # 5 340 4 341 359 366 58.0 1e-101 MLLKIISGGLVGIAFGFVLQRTRFCMTGGFRDMYIAKNNTLFYAFLIAITVESVGVLSLI KLGIVSSPYEDYSVLGAIIGSYLFGIGIVLAGGCATGTWYRAAEGLIGSWVALFFYMLSA ASMKYGALQFLNQAISKYWVVNDNLAGQLGISVWYFVLLLVIVTILLVIRELNKPKKIIA TLAPKYKGIRHLLFEKQYHKFWAGFIIGLIALIAWPASEFTGRTGGLGITTPSANLISYI ATGDVNLLNWGVFLVLGIFLGSYIAARGAGEFRWRLPDLKTIGKSVVGGILMGIGASWAG GCTIGNGLTATAVISSKGWIALPLTILGVWTASYFIFVKPNQYLKGE >gi|304427355|gb|AEEM01000003.1| GENE 30 29328 - 29555 347 75 aa, chain + ## HITS:1 COG:SA1849 KEGG:ns NR:ns ## COG: SA1849 COG0425 # Protein_GI_number: 15927619 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Staphylococcus aureus N315 # 5 74 4 73 74 101 67.0 4e-22 MAVVELETGGLVCPFPLIDAKNKMKELSIGDELLIKFDCTQATESIPNWAAENNYPVTRF EQVGQASWEIVVQKQ >gi|304427355|gb|AEEM01000003.1| GENE 31 29683 - 30483 794 266 aa, chain + ## HITS:1 COG:HI0003 KEGG:ns NR:ns ## COG: HI0003 COG0561 # Protein_GI_number: 16271979 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Haemophilus influenzae # 1 261 2 258 262 156 38.0 3e-38 MVKIIFSDIDGTLINDALKVTPRTRQALRHAVDAGILFVPVSARMPEAIKPILKDFLPDV PMISYNGAFIQDENGQVIDSCPMSPQAAQAICQYLEKEVSEVAWNVYSGEKWLSQNRMNK WISREEEVVGLVSQEADLEAIGHLSEVHKLLLMGEPEKMVTLEEKLKELYPGLSIARSLP YYIEVMANGIQKGRAVSLLADHYGVDTSETLAFGDNFNDLDMLEVAGEAYVMANAPQEVK ERVGHVTASHNHDGIALVLEKFKLAR >gi|304427355|gb|AEEM01000003.1| GENE 32 30682 - 34587 4023 1301 aa, chain + ## HITS:1 COG:BS_sacC KEGG:ns NR:ns ## COG: BS_sacC COG1621 # Protein_GI_number: 16079757 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus subtilis # 468 945 29 513 677 270 36.0 2e-71 MKKEQEKKCVNWFMHKRGKQWIYGCGVLVCGIVLGTVATPVMADEAVSSPTELVTVADVN ADNNTNTDQKTEVDQETQQPANQVETPENQTPIEQGVVGEQNQKVTEENQVTENQDVTQQ NQVTENQEPATKTQDDAQKTETTDAEEKVEVTDSLKQKADQPNESTEKARKALSTNLTTK KESSYNTNLQGLSYDANVWEVREDGLYSNAIGEGDSFLLSTSAGKNFVFQTDVTFLQNTG AASLVFRSTGDAQNLKGYVVNLDGNSHKIKFMRWGEANLIDEKEIEATSDNKYSLKVVAA NGWISYYINGILVANLSDYTIQRDDRGQTTYIKDGNFGLLNWNGEMIFQNTFYRELTDAE LPILKDVTVSSKNGPVEPKGQFFPEGAVYIQYVSHDASTVDLSFVPNNQDAVIKVTDDQG NVYSDPSNIPVSVGANYLTVTSTYTVDGYEVTSTYRINVHRRQSAEVYYNENFRDQYHYS VKDGWANDPNGLVYYNGVYHMFYQFYDDIQWGPMHWAHATSTDLIHWEDQPIAFYPDYNG AMFSGCIVADPNNTSGLFEGDKGGLVALITADGEGQRIKVAYSKDEGKTWQKLDEVAADW STDPLQNRDFRDPKVFRWEGKWFMVLAGGPLRIYSSDNLLDWSVESTYPDLHTECPDLYP IMAEGNTVKWVLSRGGRYYKVGDLKQVDGHWKFVADADYQESDGIMNFGKDSYAAMTYYV QDFGTKDNPTIPQIIELNWMNTWDNYCNLVAERTGQKFNGTFNLNLTLGLVKDGDKYVLT QTPIKAYESLRDVDHKVEYKDVVVGKDNNLFKDFSGDTYEIVAHFKPSDRTTKVGFNLRV GQGEVTKVYYDLQTGRIAIDRSQSGIILTELFRNVDSQAVTRNADGSIDLHIFVDRASVE VFTKGGTVTGANQIFTSPQSLGLGVFAEGYEAKADIALYPLKSIWKDKVETTKPQSIVPA SAKNVRMNVGDSTVVKAYVSPAVVNQDLLWSILNNGNVSTEISGNQVFVKALKKGQVIVR AQSKTDPSVYQDFVLDILEDNFKTNVKNVKVFAGDWHADGESLKVENHNSNDIYMAADKM PYENYQMDLDIKYGRGVVNIFFASGNPDANNAYSIQFGGDNSVRLFRFYSDTISESQMTA AINDNQFHHVRLVKSANAIQVFVDNQLAMSYTFDQVEDFFNNPYIGLGLWDGELEVQNFF VVDLDAKEPTQNEEKVEVVPTDPQTPAEQVVTTTTLAAKAPAKSEKATDAKAPVIPKTAL VSETVLPQTGEKDSHLAGLGIVSILAAMGAFFGQFFKKKES >gi|304427355|gb|AEEM01000003.1| GENE 33 34752 - 35717 849 321 aa, chain + ## HITS:1 COG:CAC1453 KEGG:ns NR:ns ## COG: CAC1453 COG1879 # Protein_GI_number: 15894732 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 35 321 42 325 325 228 43.0 1e-59 MKKGKLIALIVSVFIALLTMLGIYLHYKLVPYNENRVKIGATYMTMNNDFYKVLNNEIDK IVEENNDILYTRDPALDVNKQTQQVELFIKKGVNIIIINPVDANSKKLIKVLKKAKKTGI KIVVVDSQLSDNSPVDTTIVSDNYQAGVLCAKNLMQTQSSAKILLLEHQKAVSAVDRING FLATIKGHDSYQVVDRKDCLGQTEVAMPQVESVINSGVDFDTVMALNDQVAIGALAAIEN MKVTAPVKIYGVDGSPDMKNLLATTSSIQATVAQSPLTIGEKAIQAGYRLYQDKKVDKEI VIPVEFMTSDNVLNSDLTGWQ >gi|304427355|gb|AEEM01000003.1| GENE 34 35717 - 37033 1263 438 aa, chain + ## HITS:1 COG:CAC1454 KEGG:ns NR:ns ## COG: CAC1454 COG4585 # Protein_GI_number: 15894733 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 430 1 433 441 237 35.0 3e-62 MKVLKNVEFAKRALLVINFLAVLFYSSVYLSATKYIIENNFSRSLLEKINIIPSSPERIF WLSNLFFIGLLLVMYVRNREFERETKVRDWLAALEIILLFATFFALQLSYNGLILLVFMD IFFSYTDFYTFREKKAWLLFIVASFGALLLSNYDVLSLLVRTPDLDVYINFFPAGTRLVI SFIKNCLVSLNMIVFIISLMTYIIYSVTENHKIEEELLMAAQANTRLKEYVAVSEKITED RERRRIAREIHDTIGHALTGISAGIDAVTVLIDLDPEHAKKQLSSVSNVVREGIVDVRRS LNKMRPGALENRTLKDALEKMLSEYQELSHLQIDLNYHWDNVDFDKTKEDVIFRVIQESV TNSLRHGRATKISITMLSESDYVLLIKDNGTGSETIKYGFGLTQMTERLAIIGGRVAFSG KDGFSTTIHISKIQGEEG >gi|304427355|gb|AEEM01000003.1| GENE 35 37030 - 37713 631 227 aa, chain + ## HITS:1 COG:CAC1455 KEGG:ns NR:ns ## COG: CAC1455 COG2197 # Protein_GI_number: 15894734 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 219 1 220 225 293 69.0 1e-79 MIRVLIADDQELIRESLKIVLSAYPDIEVVGAVSDGTEVLETLPTSKPDVILMDIRMPKM DGVLCTKAVKENYPNIKVIILTTFDDDDFIYSALKYGATGYMLKGTSMDDLHDAVVTANE GRAMINPDIATKVFKLFSQMAQSNFAIQVDDDLVHDISKMEWRIIQQIGFGLSNKEIAAK LYLSEGTVRNYLSNILSKLNLRDRTQLAIWAVQTGVTLKSFEDDDHD >gi|304427355|gb|AEEM01000003.1| GENE 36 37706 - 39007 1235 433 aa, chain + ## HITS:1 COG:CAC1456 KEGG:ns NR:ns ## COG: CAC1456 COG1653 # Protein_GI_number: 15894735 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Clostridium acetobutylicum # 26 432 29 437 439 377 45.0 1e-104 MTKLTKIKLWLSVLVLLSACVGGYVYYQMQQKTILKIGVYAGSSWDVPNGNDYKVIDTAI KRFEKLHPSVKVVYESGISKADYSNWLTDQIVAGKQPDVFIVPEDDFNLLSSTGALSNLD SSISTSFYDSIFYKSSYQAGEYNHSHYALPFESNPTMMCINIDLLEKEGISIPKSGWTVD DFYNICKQVTKDTDGDGVIDQYGCVGYTWQQAVAAYGAKLFNETGSKAYFDSEKVKKALG LITQLKALNGNYEVTTKDFDEGKVAFIPMSLAMYRTYKPYPYHVAKYSTFSWSCVTMPAS QKGVDATQVSTSLYAISSKTKHRSAAWKFLKFLCTDEKVQQSVFNYSQGSSVLKSVMRSQ ATEDKLKEDGFGSESLTVSTLDSMLSQGVTKPTFKTYNSVMNQADYIINKSLANNSIDSD LFAIQKEIEDSLK >gi|304427355|gb|AEEM01000003.1| GENE 37 39173 - 39601 594 142 aa, chain + ## HITS:1 COG:CAC1457 KEGG:ns NR:ns ## COG: CAC1457 COG2893 # Protein_GI_number: 15894736 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Clostridium acetobutylicum # 1 142 1 142 142 114 42.0 4e-26 MKYLLLVSHGGFAEGLKTSLAMFAEDKMDQVIAVGLKNGKTVDDFAQDFRQAISGLTAED SVIVLADIVGGSPLTTACSVLDELGKLDDAVILGGMNLPMAITSAVMKDMLEGDAFVQAV LPEAQAALQEFKIASDDEEDDI >gi|304427355|gb|AEEM01000003.1| GENE 38 39620 - 40114 701 164 aa, chain + ## HITS:1 COG:CAC1458 KEGG:ns NR:ns ## COG: CAC1458 COG3444 # Protein_GI_number: 15894737 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Clostridium acetobutylicum # 1 164 1 163 164 221 65.0 6e-58 MTVSFVRIDDRMIHGQTVTRWAKEYPCDGLIAVNDAAASNKVLTQAYKGASDKKTFVWTV DAFGKKSQKVLDSDTKYFVITKNPIDMKKLLVDQGFVPSDVKEIIVGPCNDRPGAVKLGN NQSITQEEADAIEAIEKAGYKVKFQLLPDVSIGYWSDFKSKFGY >gi|304427355|gb|AEEM01000003.1| GENE 39 40191 - 41039 1112 282 aa, chain + ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 1 282 1 281 281 325 64.0 5e-89 MTISWFQAALLGLFACLSSMPGLGGTTIGNYTLGRPLVGGLVCGLILGDVKTGIICGVAM QLVYIALVTPGGTVSADVRAVSYIGIPLAMVAIHSQGLSADSADAANLAKSMGTLVGTVG TVLFYGTATMNLVWQHIGWRAVEKGQFRKLYQVDWLYPWVSHFVFSFIPTLVMCKLGATA VTAMKDALPMDGIPMKTLFTVGALLPCVGIAILLKQIVEKAVDFIPFFVGFTLAASLGLN LVSCAVISLIFAVLFYELEMAKTVRATATAADDFDDDDEEDI >gi|304427355|gb|AEEM01000003.1| GENE 40 41041 - 41874 1146 277 aa, chain + ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 1 277 1 277 277 356 62.0 3e-98 MAQKKLTKKTLMKSFHHWYYGNLTCFSQEHMQTFGYLTSMLPIVEELYDNKEDQARSMQT YTAFFNTEPQLGALIVGITAGLEEARANGSEEVDDETINGLRAGLMGPVAGIGDSLVVGT LIPVILGIALGLSTGGSPIGAVFYIVVWNLLAYLGMKFAYFKGYELGDKAVEFLVGAQGQ AIRKAVSIVGGMVVGGVAATWVSVQTSFQLGSAKNPYLVLQDKLDAVYPGFLTALFIVFC WWLMAKKNISPIKVMLLLVVIAFVGVLVGFFDPGLSY >gi|304427355|gb|AEEM01000003.1| GENE 41 41902 - 42186 383 94 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0121 NR:ns ## KEGG: GALLO_0121 # Name: not_defined # Def: putative PTS associated protein # Organism: S.gallolyticus # Pathway: not_defined # 1 94 1 94 94 151 100.0 7e-36 MTKSELIRGYETEIAYQKHMLENLGRWLTLLLAVTSLGFLLIYFFNKQIILLILGFVLMI LGSLGMITFGYGIYHGKKNLAKVIDDFETKLQSF >gi|304427355|gb|AEEM01000003.1| GENE 42 42782 - 44758 2376 658 aa, chain + ## HITS:1 COG:SP1070 KEGG:ns NR:ns ## COG: SP1070 COG4120 # Protein_GI_number: 15900939 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 361 644 1 280 288 225 44.0 2e-58 MKRNMAAIMALMLAVLTLFGCSSSKSTSDDVIHIGILQYVEHQSLTAARKGFVDELKKEG YVDGDNIVIDYENAQGDQSNLQTISTNLIANNDLVLGIATPAAQTLANLSTDVPVLFTAV TDPVSAKLVDSMENPGGIATGTSDMSPISKQVELLQKVMPNVKKVGIMYTTNERNSEVQV EEAKEAFAKAGIEVITKGISSTNDVQDTAKSLMSQTEVLFIPTDNMIVSAISLITELSKE TKIPVVGGSADVVEQGVLFTYGANYEALGRQTAKLAIRILEGEDVSDVAAEYPETLNVVT NDEMAETLGIDLSSIENDTTESSSDTTETSTSASSSTTKTSSSSTSTQTSDSSSTNGWLD IVLSAISQGLLWSIMAIGVFITFRILDIADLSAEGSFPLGAASTAIMIVNGINPLIATIG GFLAGMIAGAVSGFMHTKMKIPALLTGIITLTALYSINLLVLGSANVSLAGQETLVTLMT SALNLSKLYAVILIGVIFVALVIILLVVLLNTQVGLALRATGDNIAMGEANGIKVDRMKI LGYMISNGLIALAGSLLAQNNGYADMNMGTGTIVNGLASIILAEVIVKYLPLGKRLWSIV LGSILYRLVLVIILAMNVDAQMLKLASAILLALILYVPEIRNKLHIKPSKTLTPGGED >gi|304427355|gb|AEEM01000003.1| GENE 43 44758 - 45561 180 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 24 233 147 345 398 73 29 4e-12 MALLTLSNIHKTFEKGTVNENHVLRGLDLDIKQGDFISVIGGNGAGKSTLMNSIAGVVDI DEGDILLEGESIRKASVAARSKDISRVFQDPRMGTATNLTIEENMAIAYRRGKKRSFFKK SVTEQERELFKETLTELGLGLENRMKTDAAFLSGGQRQALTLAMATLVRPKILLLDEHTA ALDPKTSDMVMHLTKKIVEEQELTTLMITHNMEHAIEYGNRLIMLYHGKIVVDVRGDEKK NLTVAQLMDLFHKNSGQALNDDALVLG >gi|304427355|gb|AEEM01000003.1| GENE 44 45774 - 46058 492 94 aa, chain + ## HITS:1 COG:SP1907 KEGG:ns NR:ns ## COG: SP1907 COG0234 # Protein_GI_number: 15901733 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Streptococcus pneumoniae TIGR4 # 1 93 1 92 94 96 65.0 1e-20 MLKPLGDRVVLKVEEEKEQTVGGFVLAGASKERTQVATVVAVGDGARTLTGELVAPSVAA GDKVIIENGVGIEVKDDDNTVTIVREADILAILA >gi|304427355|gb|AEEM01000003.1| GENE 45 46126 - 47754 1589 542 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 523 3 527 547 616 60 1e-175 MAKDIKFSADARASMMRGVDILADTVKVTLGPKGRNVVLEKSFGSPLITNDGVTIAKEIE LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE SAVAVAVDELKAIAQPVANKEAIAQVAAVSSRSEKVGEYISEAMEKVGNDGVITIEESRG METELDVVEGMQFDRGYLSQYMVTDNEKMVADLENPYILITDKKISNIQDILPLLEEVLK TSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGGTVIT EDLGLDLKDANMTALGQAAKVTVDKDSTVIVEGAGEASAIANRVNVIKSQLEATTSEFDR EKLQERLAKLAGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV ISKVAELELDGDEATGRNIVLRALEEPVRQIAFNAGYEGSVIIEHLKNSEVGTGFNAANG EWVNMVEAGIIDPVKVTRSALQNAASVASLILTTEAVVANHPEPAAPAPAAPGMDPSMMG GF >gi|304427355|gb|AEEM01000003.1| GENE 46 47929 - 48804 804 291 aa, chain + ## HITS:1 COG:SP0141 KEGG:ns NR:ns ## COG: SP0141 COG1396 # Protein_GI_number: 15900079 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 5 284 3 282 287 208 42.0 1e-53 MNEKELMNLGELYRELRVARGLKLKDVARGNLSLSQLSKFENGQTMLAADKLLVAISGIH MSFAEFGHALNHYQESPFFAIGKQIAELQLEGNVEGLKQLLNTLEDTETFDTYNRLNRID VASAIHSLDLNYEIADEDKKFLTDYLYGIEEWTEYELYIFGNTMAILSDADLIFLGKAFA ERDKFYLSLPQHKKTAELTFLNIIFALIDREELYYTTFFIDKLEKLLNYQDMFTIVVLNF LKQIIAYLKGEITTTEPMEEYIEMVEKLGNPTTALILRERLEEFCLKDKKE >gi|304427355|gb|AEEM01000003.1| GENE 47 48878 - 48940 93 20 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKKLIAVAAVLLTFRIWPF >gi|304427355|gb|AEEM01000003.1| GENE 48 49745 - 49825 61 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFFWLGVAGAVLGAIYIVRIDNKDDF >gi|304427355|gb|AEEM01000003.1| GENE 49 49950 - 51569 1704 539 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0127 NR:ns ## KEGG: GALLO_0127 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 539 1 539 539 931 100.0 0 MKKIKSILRLKKVWIPSLILGLALVLFLVWGSFHYSKKHLIEEYVSAYRQSGDTFENIKE YVVWSDTNQQVTNDQAQYATFTKLSKSEAQKLSETLEKADSSDDSYIKKVGRRFLFFPTY RVALKPMSLTIKTNIKQVDVLLNEKKVAVSDSEDYTLTLERLPIADYTASISGTYNGKSV ELSKAYDGENSLLDLTVSFKTFKVTSNLTDGELYFDDTRIGTLSNGEYDVSDYPLTDSAQ AYVKKNYSDGELTSQKQALSGISDGDTVALDAENLLDEASAGQILVSAFDQLISYLSTGQ DSSTVSTVFEDGANNEFYEGLKESIKAKMQTDTRKASSLTVPAITLTSLSQIGKESYLVN FSATYDFYYDKSTDSEKNTSGDVIQTLEGKMTLKKSGSSYVVANSGQKNITVTGENNQVK SDSVFPEKILGTWKVDDEDDITFKFEADGTITKTTKDNEVKTAKVTKLEEEGDNIYRYVY DDGTDTSAFITSGIGGIGVKYAFGIKIDGSHLKLVLWQTGTNDDFDYSKPLYGNTLTKK >gi|304427355|gb|AEEM01000003.1| GENE 50 51660 - 52520 453 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 24 275 25 277 285 179 41 9e-44 MTLSFTLKNPYPDCTVKKLLEEHLLIPRKIRHFLRTKKHLRINGEMINWQSLVKTGDTIH LIFDDDDYPQKEIPFGQAELVDCLYQDEHLIIVNKPEGMKTHGNEPNEIALLNHVSAYVG QTCYVIHRLDMETSGAVMFAKNPFVLPIINRLLENKDIAREYWALVQGKFEPKHQVFQDK IGRDRHDRRKRVVDRKNGQTALTIVDRLKVFPNGTLVKCRLKTGRTHQIRVHLSAHNHAI IGDPLYSKIPAKRLMLHAHKLSFTHPFTLEKISVEAKSQTFEAGLS >gi|304427355|gb|AEEM01000003.1| GENE 51 52578 - 52775 309 65 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0129 NR:ns ## KEGG: GALLO_0129 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 65 1 65 65 94 98.0 1e-18 MNKGFESFKKTLSHESLKAVYDETKIEVSESEAEGTEAYSMAVATQMAVNLLEKYHDWLH ENDQK >gi|304427355|gb|AEEM01000003.1| GENE 52 52961 - 55285 2800 774 aa, chain + ## HITS:1 COG:SPy2059 KEGG:ns NR:ns ## COG: SPy2059 COG0744 # Protein_GI_number: 15675827 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 23 761 31 760 778 924 65.0 0 MTKLKTIKEKILSLFNDIKERIPSHNHSKRNSSEEELSGATVNEFETEKTEEKEATPTYQ RSKGHHEKVKKSPAWVQKISRFMPSTKNPIRRFWRRYRIGKILLILTGIGVLAIGSYLYF VAKSTNVSDLQDALKATTVIYDQNGDQVGSLSGQKGTYVELDAISDNMKNAVIATEDRTF YENSGINYSRFFLALFTFGHFGGGSTITQQLAKNAYLSQEQTITRKAKEFFLALELTKKY TKDEILTMYLNNAYFGNSVWGIEDASQKYFGTSAANLTIEQSAILAGMLKGPEIYNPYYS IENATNRRNTVLSVMVDAGKITQEEADEAEQVDISSELNDTYTGTSDDYQYASYFDAVIQ EAEETYGLSEDDIVNNGYKIYTELDQNYQANMQAVFDNTSYFPTSDYDGESAQGASVAME PSTGAVRGLVGRVSSTSATFRSFNYATQASRSPGSTIKPLVVYSPAVASGYSITTELPNT VQDYDGYAPTNYGGIETDDLPMYQALANSYNIPAVYLLNEIGISKGISYGKKFGLNMDNV SEELGIALGGGVTTNPLEMAQAYSTFANGGVMPKAHLITKIENASGDVIAEFKQSNKRVI SQSVADKMTSMMLGTFSNGSAINANAYGYTMAGKTGTVEASFNEDLTSDQWVIGYTPDVV IAQWIGYDSTDENHYLTDASSGTASTIFSAVASSILPYTAGTEFTVENAYSQNGYDLVYS TDDSTDTSSSSSSSSSDSILDKVQESAQNAGDTIGRAVKDAWDSFSSWFNSQTN >gi|304427355|gb|AEEM01000003.1| GENE 53 55337 - 55489 253 50 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22538200|ref|NP_689051.1| 50S ribosomal protein L33 [Streptococcus agalactiae 2603V/R] # 1 50 1 50 50 102 92 1e-20 MAQKKASLACTECGSRNYSIGVSSNPKPVRLEVNKFCKHCKKYTLHKETR >gi|304427355|gb|AEEM01000003.1| GENE 54 55561 - 55737 331 58 aa, chain + ## HITS:1 COG:SPy2058 KEGG:ns NR:ns ## COG: SPy2058 COG0690 # Protein_GI_number: 15675826 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Streptococcus pyogenes M1 GAS # 1 58 1 58 58 76 72.0 1e-14 MAFIKGVFTILKDTTWPNRKQRWKDFISVLEYTAFFTIVIFIFDKLLSLGVTDLLNRF >gi|304427355|gb|AEEM01000003.1| GENE 55 55937 - 56476 835 179 aa, chain + ## HITS:1 COG:SPy0164 KEGG:ns NR:ns ## COG: SPy0164 COG0250 # Protein_GI_number: 15674369 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Streptococcus pyogenes M1 GAS # 1 179 1 179 179 314 92.0 5e-86 MLDSFDKGWFVLQTYSGYENKVKETLLQRAQTYNMLDNILRVEIPTQTVNVEKNGKIKEV EENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRSILISMGQT VDVIDTNIKPGDVVQIIDGAFAGQEGRVVEIENNKVKLMINMFGTETQAELELYQIAEL >gi|304427355|gb|AEEM01000003.1| GENE 56 56566 - 57279 574 237 aa, chain - ## HITS:1 COG:MA2034 KEGG:ns NR:ns ## COG: MA2034 COG1226 # Protein_GI_number: 20090882 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Methanosarcina acetivorans str.C2A # 2 223 19 243 279 95 31.0 7e-20 MRKQLFNIIEPSDNLTTVEKIYDVFMVCAIVVSLLPLTSKTTTSFYITLDAITTIIFIID YFLRFITADYKLNQGKLSFVKYPFTFLAITDLIAILSSVLFWNNTFKLLKIIRMVRTIRV FKLFRYSKSLNLLINVLKRQKESLFIVGALVITYIFISALVIFNVEPDTFKNFFDALYWS TISLTTVGYGDIYAVSEIGKLITMISSILGVAIIALPVSIMTAGYLEEIEKEDTESK >gi|304427355|gb|AEEM01000003.1| GENE 57 57388 - 58233 964 281 aa, chain + ## HITS:1 COG:PM0638 KEGG:ns NR:ns ## COG: PM0638 COG4667 # Protein_GI_number: 15602503 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pasteurella multocida # 1 279 1 279 280 329 56.0 4e-90 MSVGLVLEGGGMRGLYTAGVLDTFLDAGIKVDGVVSVSAGALFGVNFLSKQKGRALRYNK KYASNPGYMGLRSWLKTGNVVNKEFAYYKVPMELDVFDEEAFEKSGVPFYATVTNLATGE AEYHKVDNVFEQMELLRASSALPLASKIVEWQGNKYLDGGLSDSIPVDFAKSLGFDKLIV VLTRPIDYRKKPSNGHVYKLFYRKYPKFVEVASKRYQHYNDTIEHISNLENKGELFAIRP SQNLEIGRLETNPDKYEEIYQIGVKDTKAIMEQLKDYLAND >gi|304427355|gb|AEEM01000003.1| GENE 58 58366 - 60867 3224 833 aa, chain + ## HITS:1 COG:SPy0173 KEGG:ns NR:ns ## COG: SPy0173 COG0495 # Protein_GI_number: 15674378 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 833 1 833 833 1544 90.0 0 MATYNHKEIEKKWQAYWADNHTFKTGTDADKPNFYALDMFPYPSGAGLHVGHPEGYTATD ILSRFKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAQNIANFKRQINSLGFSYD WDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERG GYPVVRKPMRQWMLKITAYAERLLEDLEDLDWPESIKDMQRNWIGKSTGANVTFKIKDTD KDFTVFTTRPDTLFGATYAVLAPEHPLVEAITTPEQAQAVADYKHQASLKSDLARTDLAK EKTGVWTGSYAINPVNGKEMPIWIADYVLVSYGTGAIMAVPAHDTRDWEFAKQFDLEIIP VLEGGNVEEEAYTEDGLHINSGFLDGLDKAQAIDKMVEWLEAEGVGNKKVTYRLRDWLFS RQRYWGEPIPIIHWEDGTTTAVPEEQLPLVLPVTKDIKPSGTGESPLANLTDWLEVTRED GVKGRRETNTMPQWAGSSWYFLRYIDPHNDEKLADEELLKQWLPVDIYIGGAEHAVLHLL YARFWHKFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIET GEELEQAPAKMSKSLKNVVNPDDVVEHYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKF LDRVYRLLTTKEIVAENNGNLDKVYNETVKAVTEQLEAMKFNTAIAQLMVFVNAANKEDK LFADYAKGFVQLLAPFAPHLSEELWQTLTQSGESISYVAWPTWDEAKLVENDVEIVIQIK GKVRAKLVVPKDSSREELEKLALANDKIQTEIAGKDIIKVIAVPNKLVNIVVK >gi|304427355|gb|AEEM01000003.1| GENE 59 61123 - 62154 328 343 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 5 330 6 332 345 130 29 3e-29 MEVKQEIVETINGQKVEKYTIVNDNGVQVGLLTLGATWQEFLVPDDKGGQKNLIIGFDKP SDYLKNPLCAGQSIGRVAGRINQGKVNLDGKEIQLPQNEKGNTLHGGSQGFHQQIWTAFI EAGQNALSVVMTYDAKEEIDHFPGDMQVEVRFTLDNANRFTIVYTGKNATKTTLFNPTNH VYFNLGNRQDLSQHTFTLAADHYLETRDDLIPTGKFIDVAGTAYDFQTGQNLGEAIADTG GLDDAFLVNASLDKTCGELKDDESGDSVHLYSDRDAWVVYSMGGIPEGIYPARDKGKMAK EFEALALEAQFLPDAINHDNFGDITLQANEEKSYTIAFEYHKE >gi|304427355|gb|AEEM01000003.1| GENE 60 62371 - 62595 258 74 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0138 NR:ns ## KEGG: GALLO_0138 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 74 1 74 74 126 100.0 3e-28 MIEITFLNAGNQERVVTFDSYEEFERSQQACSIDIADYYKVTKVVYNGHVLDYSGNYGNL FYYFLKQDLTQYRI >gi|304427355|gb|AEEM01000003.1| GENE 61 62653 - 63234 413 193 aa, chain - ## HITS:1 COG:BH2748 KEGG:ns NR:ns ## COG: BH2748 COG2249 # Protein_GI_number: 15615311 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus halodurans # 6 191 1 186 198 107 31.0 2e-23 MEANHLDTLIIYAHPYDKSFNHAILKKVKDSLTQRGQEFQTIDLYKDNFNPAYTTEELAL FKEGKTTDPLVAQYQKSLTTANEVIFIFPIWWNDTPAIIKGFIDKVMKKRFAYDVGKTGL IGHLTHIKKATVLTTSTSPTWYLKLFCGNAIKRVFINATLKQLGIKTVNWLNMGNIDNST TQQRQNFLERVSL >gi|304427355|gb|AEEM01000003.1| GENE 62 63408 - 64142 750 244 aa, chain + ## HITS:1 COG:CAC3665 KEGG:ns NR:ns ## COG: CAC3665 COG1073 # Protein_GI_number: 15896898 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 8 244 20 261 265 103 31.0 3e-22 MERDGKHLYGKLYLPENVDNPPLVILSHGFGANYKSVEGYAHYFVDNGVAAYVFDFNGGG LGSRSDGKMTEMSVLTEAADLEVVLDYFQDFSGINNQQIFLFGASQGGFVSTYVAGIRPD DIAGLIVLYPAYVLQDDSKKRNPNPELGPETSRIMGIEVGKIYDIDAQSFDIYDIMPQYH GKTLIIHGTSDNIVPISYSERAVTTFPNARLVVIDGAGHGFTGKANEIAKTESIDFIKNI ISEK >gi|304427355|gb|AEEM01000003.1| GENE 63 64667 - 65935 999 422 aa, chain - ## HITS:1 COG:SPy1992 KEGG:ns NR:ns ## COG: SPy1992 COG2256 # Protein_GI_number: 15675782 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Streptococcus pyogenes M1 GAS # 1 421 1 421 422 722 86.0 0 MPNNLALRMRPKNIDQVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIA GTTKYAFRTFNATTDSKKRLQEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGNI IMIGATTENPFFSVTPAIRSRVQIFELEPLSTDDIKTALQTALSDKERGFDFDVDIDADA LDFIATTTNGDLRSAFNSLDLAVMSTKADDNGLRHISLDTVENSLQRSYITMDKDGDGHY DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVTA LDAAQRIGFPEARILIANVVIDLALSPKSNSAITAIDKAISDLHQNGNLPIPRHLRDGHY AGSKELGNAQGYKYPHDYPEKWVKQQYLPDKLVGKNYFDANQTGKYERALGANKERIDEL SK >gi|304427355|gb|AEEM01000003.1| GENE 64 65925 - 66419 362 164 aa, chain - ## HITS:1 COG:L100575 KEGG:ns NR:ns ## COG: L100575 COG0454 # Protein_GI_number: 15672080 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 1 160 1 159 162 129 40.0 2e-30 MQIRPMELEDIEQVVILENQTWDTFNTPAPLPIANKDKIIKDFENGTHYLVAEENQDILG VLDYHTYYPFPSGHHVVTFGIAVSEKTRGQGIGHKLIQTFFDMAKADGYQKVLIHVLSSN EKACAFYEKLGFKQEAILKNQFYLNHTYVDDLVYSYYLEEIHAK >gi|304427355|gb|AEEM01000003.1| GENE 65 66483 - 66953 621 156 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0144 NR:ns ## KEGG: GALLO_0144 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 156 1 156 156 255 100.0 4e-67 MAKFGFLSVLEEEMDKHFTFDYAIDWNKKNHAVEVTFILEAQNQSAVETVDDQGEISNDD IIFEDYVLFYNQAKSKVDEDDYLVTIPFDAKKGFSREFLAYFAETLNDVATKGLDDLMDF LADENATDFALEWDAESFENGKAELKETEYFAYPRY >gi|304427355|gb|AEEM01000003.1| GENE 66 67148 - 67621 441 157 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0145 NR:ns ## KEGG: GALLO_0145 # Name: not_defined # Def: putative acetyltransferase, GNAT family # Organism: S.gallolyticus # Pathway: not_defined # 1 157 1 157 157 300 100.0 1e-80 MIRLEQAQAKDLEAIISIQRASFKAIYDKYHDEYDPYVEDEERIRWKLVERPNSFYYFVK KDDEIIGFLRVLTNDGQTKAWLGTAAILPKYQRKGYGSKGIYLLEEEFSTVTQWDLCTVF QEESLVKFYEKCGYHQTHTESEQEGMDMVYMTKTINN >gi|304427355|gb|AEEM01000003.1| GENE 67 67684 - 68637 1386 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477939|ref|ZP_04062552.1| ribosomal protein L11 methyltransferase [Streptococcus salivarius SK126] # 1 317 1 317 317 538 82 1e-152 MNSWQELTVEVLRDAEEAASNILIELGSQGVAIDDSADYLGHVGKYGEVFPEIKQVETVK ITAYYPENVDIEAVEKEVADRLAELTDFGVDAGDVHYATQELAEQDWAENWKKYYEPTRI SHDLTIVPSWTDYEASEGEKTIRLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVLDVGT GSGVLSIASSLLGAKDIYAYDLDEVAVRVAQENIDLNANTENIHVATGNLLQGVGIQADV IVANILADILVNMTEDAYRLVKDEGYLIMSGIISDKWDMVRKSAEDAGFFLETHMVQGEW NACVFKKTDDISGVIGG >gi|304427355|gb|AEEM01000003.1| GENE 68 68638 - 69381 862 247 aa, chain + ## HITS:1 COG:SPy1987 KEGG:ns NR:ns ## COG: SPy1987 COG1385 # Protein_GI_number: 15675777 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 245 1 245 249 329 71.0 3e-90 MQQYFVAGQAQDVVTITDKDTIKHMFNVMRLTENDEVVLVFDDHVKRLAKVIDSAEHRFE IIEELDSNVELPVEVTIAAGFPKGDKLEFLAQKGTELGMAKLWAFPADWSVVKWDGKKLA KKADKLAKITLGAAEQSKRNSIPEVTLFEKKAAFLAELEQFDRIFIAYEESAKEGETAVL ARELSQMKAGEKILFIFGPEGGISPEEIETFESKGGLKIGLGPRIMRAETAPLYALASVS YALELMK >gi|304427355|gb|AEEM01000003.1| GENE 69 69544 - 70560 924 338 aa, chain + ## HITS:1 COG:BH2923 KEGG:ns NR:ns ## COG: BH2923 COG1609 # Protein_GI_number: 15615486 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 3 333 4 337 344 194 33.0 2e-49 MATIKDVARVAGVSTSTASRALHDSSMISEATKRRVRRAMKELDYSPNYSAQNLVNRTTN TIGIILPVRESQDSLGNNPFFMQIIQGISSVCSENDYMVSLATGRTDDELQKNIQTLIRS GNITKLIFLYSRKADPVFEFVKQEKKVSCVVVGRSYENAPQKTVRFVDNNNDQAGKDATT FMLAKGYNHLVFAYTDMDELVQTERYQGYCEALQEYGKKGSTLQLSRLSDEENAVKLQTF LAENPKTEAFVACDDIMAIRLQRLFKDSDLENHYAMIGFNNSLITEIASPALTSVDIFPY ELGENAAKLLLADPKNLTEQTVVIPHKIIERESTPDLG >gi|304427355|gb|AEEM01000003.1| GENE 70 70826 - 73009 3002 727 aa, chain + ## HITS:1 COG:SPy1986_1 KEGG:ns NR:ns ## COG: SPy1986_1 COG1263 # Protein_GI_number: 15675776 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 1 455 1 455 472 707 76.0 0 MKKAFKNLTSFEFWQKFGKCLMVVIAVMPAAGLMVSIGNSLPLINADSALLATVGNVIAQ IGWGIINNLHILFALAIGGSWAKERAGGAFAAGIAFILINLITGHVYGISLDMIADGTST VHNVLGGEMLVADYFVNVLGQPALNMGVFVGIISGFVGATAYNKYYNYRKLPDVLSFFNG KRFVPFVVIYRSVLVGLFMSLVWPIIQSGINGFGMWIASSQDSAPFLAPFLYGTLERLLL PFGLHHMITIPMNYTSLGGTYEILTGAQKGTEVFGQDPLWLAWVTDLINLKGSNASAYQD LLTNVTPARFKVGQMIGATGTLMGLSLAMYRNVDPDKKKKYTAMFISTAAATFLTGVTEP IEYMFMFVAMPLYVVYAVVQGVTFALADLVNLRLHSFGNIELLTRTPMALKAGLGGDLIN FVICCILSGVVMYFIADFMIKKFNFATPGRNGNYDDMDDDQASASADGASVSADSQIVQI INLLGGRDNIEDVDACMTRLRVTVKDVAKVGDEDTWKKAGAMGLIIKGSGVQAVYGPKAD ILKSDIQDLLDSGAEIPTVNLSEVEGNDVTKVSYKGVTEDVNAVADGDVKPITEVKDPVF AGKMMGDGFAVEPENGNVYAPVSGIVTSVFPTKHAFGLLTDNGLEVLVHIGLDTVALNGV PFSVKIAEGQRVQAGELLVVADLAAIRSAGRETTIIVAFTNTAEIKAVNLTQTGKVSANT PVAKVEL >gi|304427355|gb|AEEM01000003.1| GENE 71 73113 - 73928 743 271 aa, chain + ## HITS:1 COG:SPy1985 KEGG:ns NR:ns ## COG: SPy1985 COG3568 # Protein_GI_number: 15675775 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 271 1 271 272 342 62.0 3e-94 MAKFLTLNTHSWLEANSLKKLFDLAETIYSENYDVICLQEINQDIRGLLTKEVDGYEKLP GSPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVNDILVSD VDDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLETALLDYPKPLVLMG DFNNPTDTAGYDMILNSPLDLQDSHKVAKKVQGDHTIIEDIDGWEGNKQSLKVDHVFTSK DIDILSSTVTFDGGEAPIVSDHFGLAVELNY >gi|304427355|gb|AEEM01000003.1| GENE 72 74293 - 75330 1251 345 aa, chain - ## HITS:1 COG:SP0627 KEGG:ns NR:ns ## COG: SP0627 COG1363 # Protein_GI_number: 15900534 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 345 1 345 345 530 75.0 1e-150 MKTTVDYITKLANIPSPTGYTSHIMNYVIAELESFGYAPARTNKGGVMVTVTGKNDSKHR VVTAHLDTLGAMVRAVKPDGRLKMDLIGGFVYNAIEGENCTVHVSKNGKKISGTILMHQT SVHVYKDAGTAERNQTNMEVRLDEKVTNEKETRALGIEVGDFISFDPRVVVTESGFIKSR HLDDKVSAAILIELLKEYKAQNITLPYTTHFYFSAFEELGHGANSSIPVETVEYLSVDMG AMGDDQQTDEYSVSICVKDGSGPYHYELRQHLVKLANDNKIPYKLDIYPYYGSDASAALR AGAEVKHALFGAGIESSHSYERTHIDSVQATERLVDAYLKSPIVE >gi|304427355|gb|AEEM01000003.1| GENE 73 75438 - 75917 444 159 aa, chain - ## HITS:1 COG:SPy1984 KEGG:ns NR:ns ## COG: SPy1984 COG1780 # Protein_GI_number: 15675774 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Streptococcus pyogenes M1 GAS # 10 150 4 144 160 213 70.0 1e-55 MSQEKRLAPLSIVYISLSGNTQSFVKRLTEHLLNHYSLDTQTINIKELNHETFPITTPFV AVLPTYLEGGNGIDSGDVEILTNPLGDFIAAHDNYKHCFGIIGSGNRNFNEQYCLTAKQY AKRFGFPMLGDFELRGTSADIERLAKIIVKQHQGFANPS >gi|304427355|gb|AEEM01000003.1| GENE 74 76166 - 76480 495 104 aa, chain + ## HITS:1 COG:SP0305 KEGG:ns NR:ns ## COG: SP0305 COG1440 # Protein_GI_number: 15900238 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 104 104 143 70.0 7e-35 MSKALIICVAGMSSSLMAQKTTDFFKNQGKDITVEAISSNEGEQVITDATYDLYLVSPQA GMYYNQFAAAGEKSGRPVVKVPPQAYVPIPMGVEKMANLIVENI >gi|304427355|gb|AEEM01000003.1| GENE 75 76497 - 76817 470 106 aa, chain + ## HITS:1 COG:SP0308 KEGG:ns NR:ns ## COG: SP0308 COG1447 # Protein_GI_number: 15900241 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 104 104 115 69.0 1e-26 MTEEELQLAAFEIILHSGNARTSVHEAFAAMKEGKYDEAKEKLDAADAELLEAHHAQTDL LQKYASGTEVKIEIIMVHAQDHLMTTMTLKEVAVEMITLYQRLDEK >gi|304427355|gb|AEEM01000003.1| GENE 76 77426 - 78826 1712 466 aa, chain - ## HITS:1 COG:SPy1599 KEGG:ns NR:ns ## COG: SPy1599 COG2723 # Protein_GI_number: 15675482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 6 462 4 460 480 658 65.0 0 MATYTFPENFWWGAATSGPQSEGRFNKKHANMFDYWYEIEPEVFYDQVGPDTASNFYNSY KEDIALMKKVGLNSVRTSIQWTRLIDDLETNTVNQDAVDFYNNVIDCFIENGIRPIMNLH HFDLPVELYHKYGGWESRHVVDLYVGFAEQAFKAFGDRVKDWTTHNEPMVVVDGEYLYQF HYPKLVDGKKAVQVAYNLNIASAKAIAKFRELGLDKDGGRIGTVLNLTPTYAASDSEDDQ AAAHFAELWNNKMFLEPAINGHFPEELEAVLEKDGVIWQTEPEDAEIFKNNTVDFLGVNF YHPNRVKAPDIAPNSVGAWLPSRYYDEYNMPGRRMNIDKGWEIYPEAIYDIAINIRDNYK NIPWFVSENGMGVSREERFMDESGQVQDDYRIDFIKEHLACLHRGIEEGSNCFGYHLWTP IDCWSWMNAYRNRYGFISNNIHTQIKTIKKSGEWFKQVTVDNGFEE >gi|304427355|gb|AEEM01000003.1| GENE 77 78977 - 80245 1428 422 aa, chain + ## HITS:1 COG:lin0900 KEGG:ns NR:ns ## COG: lin0900 COG1455 # Protein_GI_number: 16799973 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 1 416 1 416 428 551 70.0 1e-156 MNKFLDAISDKLLPLANKLGSNRYLSILRDAFMLAFPLTMFGSIVVVICNLPFLSDDLKS LLYDIMGSGQSATMSIMTVFVTFGIGYYLSKSYDVEGIFGGAISFASFLILTPFFTTTDS GEEVSSVLSLDRLGAKGMFLGMIVAFLAAEIYSRASKKGWQIKMPDSVPPAVAKSFAALI PAILTLSVFTAINAIVTVGFNTNLHDVIYNVIQVPLVGLGSSIWATLIAIFFIQFLWFFG LHGQILVNSVMDPVWNTLMFENLEAYKAGEHLPHIITKPFMETFTVGLGGSGMTLAVVII MAFFLKKQQYRDVGRLALGAGIFNVNEPVIFGLPIVLNATILIPWVIAPIIVTALNYFVM AIGLVPAPTGVSVPWTVPVFFSGMIATNSLAGGLLQIVDCLIVGFIWYPFLRMLDKQPDS AL >gi|304427355|gb|AEEM01000003.1| GENE 78 80298 - 81023 730 241 aa, chain + ## HITS:1 COG:lin0901 KEGG:ns NR:ns ## COG: lin0901 COG2188 # Protein_GI_number: 16799974 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 237 1 233 237 245 51.0 7e-65 MSKYEEIAGIIRTRISDGTYPIDSMLPIQSDLAKEFGVSRMTIKKAIEMLTIEGLVLSKQ GNGTKVLNSSFWDKEDSKFRLNNYNGLSYDMKDDPRKLTSKIIEFNVEFPDAKIAERLQV DSATPVYKIIRLRLLDGKPYALEHTHMSCDLAPGLDDDILLTSVYDYLWHQLGLKFAGSY RHITAEKPDHYDKDYLACKDDDPILQVEQVVYLENGRPIEYSRSRNRFDTRGYSLLDVKN I >gi|304427355|gb|AEEM01000003.1| GENE 79 81099 - 82049 1226 316 aa, chain + ## HITS:1 COG:SPy1810 KEGG:ns NR:ns ## COG: SPy1810 COG1482 # Protein_GI_number: 15675642 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 315 1 315 317 508 75.0 1e-144 MAEPLFLKSQMHDKIWGGTKLRDEFGYDIPTETTGEYWAISAHPNGVSIVDNGTYKGEGL DKLYREHKELFGNPKSEVFPLLTKILDANDWLSVQVHPDDAYALEHEGELGKTECWYVIA ADEDSEIIYGHNAKSKEELRQLIEAGKWDDLLTKIPVKAGDFFYVPSGTMHAIGKGILIL ETQQSSDTTYRVYDFDRRDAQGNLRDLHIEQSIDVLTIGEPANSTPVTVDVDNLSSSLLV SNEFFAVYKWVVSGVVNLTQTAPYLLVSVLSGQGSLKVDNRVYNIKKGDHFILPNDVKSW EFDGELEIIASHANEK >gi|304427355|gb|AEEM01000003.1| GENE 80 82375 - 82776 542 133 aa, chain - ## HITS:1 COG:CAC2916 KEGG:ns NR:ns ## COG: CAC2916 COG0853 # Protein_GI_number: 15896169 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Clostridium acetobutylicum # 1 126 1 126 127 154 58.0 4e-38 MHIQMLKSKIHRAVVTGAEVDYVGSITVDPELFEAAGMVEYEKVQIADVETGSRLETYII AGEPGKGEICLNGAAAKLVNVGDHVIIMSYASLTPEEAKTQKPLVVFVNEKNQLTRLTHY EKSGRLYDQEAEK >gi|304427355|gb|AEEM01000003.1| GENE 81 82789 - 83631 919 280 aa, chain - ## HITS:1 COG:CAC2915 KEGG:ns NR:ns ## COG: CAC2915 COG0414 # Protein_GI_number: 15896168 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Clostridium acetobutylicum # 1 279 1 279 281 363 62.0 1e-100 MKIVHTVEDVRKAVQAWKADGKSIGLVPTMGYLHEGHKSLIDKAVAENDHVVVSVFVNPI QFAPTEDLESYPRDLEQDARLCEAAGASLIFNPEPSDMYSPTFSSFIDMSTLTQGLCGKT RPIHFRGVCTVVGKLFNIVEPNRAYFGQKDAQQLAVIKHMVDDLNFNLEIIGCPIVRETD GLAKSSRNTYLSAEERQAALVLSKSLALAEKMIQDGETDTDKLKQAMTDFIEKEPLAKID YVEFVDWKTLEPVSQIDRPVLNAIAVYIGKTRLIDNHIYE >gi|304427355|gb|AEEM01000003.1| GENE 82 83655 - 84482 891 275 aa, chain - ## HITS:1 COG:CAC2914 KEGG:ns NR:ns ## COG: CAC2914 COG0413 # Protein_GI_number: 15896167 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Clostridium acetobutylicum # 1 274 1 274 276 327 59.0 2e-89 MKNTVLSFQRAKKDGKKLTMLTAYDYSTAKLIDSTGINSILVGDSLGNVVLGYDDTVSVT LDDMIHHGKAVCRGAKNALVIVDMPFMSYQISVEQALENAGRLMKETHCQAVKLEGGKSV CPQIKAMVEAGIPVCAHLGLTPQHINAFGGFKVQGRTEAAAKQLIEDAKAVQEAGAFAVV LEAIPAELAQLITKQLDIPTIGIGAGNQTDGQVLVYADLLGLFSDFTPKFVKRYANIGEL ISGAVKNYIDDVATQKFPTPENEYHIDDTIIEKLY >gi|304427355|gb|AEEM01000003.1| GENE 83 84668 - 86131 1825 487 aa, chain - ## HITS:1 COG:CAC0706 KEGG:ns NR:ns ## COG: CAC0706 COG2730 # Protein_GI_number: 15893994 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Clostridium acetobutylicum # 28 204 506 700 722 82 30.0 2e-15 MKKALVGSLATLTVVAGLASAQGVKADEIVSGQTYKITAKHSGKALDVASKATYAGANVQ QWSYNGGTNQQWKVVDTGDGYYKLVSVNSGKVLDVASAATYNGANVQQWDDTNGTCQRWK IVDTGDGSYKLISAVSGKALDVAANSSDDGANVQQWDDNGGWNQKWEFTKVSDSGNTGGD TGGDTTTPVSTSGFYTNGTTLYDAKGNPFVMRGINHAYSWYQGYEDTAIPAIAKTGANCV RLVITDGQQYSKTSLSELQKLIQLCKDNKLIAIVEVHDATGSDNIQDLEKAADYWIEMKS ALIGNEANVILNIANEWGGAWDSSNWAAGYQQVIPKLRNAGIKNTLMVDCAGWGQYPQSI AEAGQSVVQADSQHNIMFSIHMYEYAGAYGAVQSNIDSALNVGVPLCIGEFGIRHTNGDV DYKTIMSYSQSKGVGYLGWSWKGNGDTWAYLDIAQDWSGSQLTEQGNAIIYDQNGIKNTS KRCTIFD >gi|304427355|gb|AEEM01000003.1| GENE 84 86669 - 87961 1620 430 aa, chain + ## HITS:1 COG:BH3680 KEGG:ns NR:ns ## COG: BH3680 COG1653 # Protein_GI_number: 15616242 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 1 379 1 399 438 90 25.0 8e-18 MKKGLLTIGMTALAAVTLVGCSSGSSDSDVETITFINHKTDWETNGKWDEYIAKFNEKYP DIKVEVQTITDYAGQMKTRMNSKEYGDVLMIPGDISPKDYENFFEPLGDTEELSEKYLGL NDRSYEGVQYGIPSQMNATGLVVNKKVFEDAGITEFPKTTEDFIAALKKIKENDSSIVPL YTNYAAGWTLSNWDFTRTGVSGDADFTNEMTSDTSPFDEGDTMYTIYNTLYTVAKEGLIE SDPTTSDWEQSKVDLANGKVAVMVLGSWAVPQVQEANEDNADNITFEAFPVTASDGKQYM PIGGDYNYGINVNSKHKKAARKFIDWMVNESDYAVDNGGIPTVKGAEYPKALQDSQDAGV ELIEENPAPEGKESLFSDINNESELGIGSTDTEKQRIIDAAVGNSKESFDDIMKDFNTRW ANAIKAVSDN >gi|304427355|gb|AEEM01000003.1| GENE 85 88075 - 88959 838 294 aa, chain + ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 11 284 4 282 292 148 31.0 1e-35 MTKSKLSKEWEKRILVFSFTIIPVLLLLVFSYYPLIKMIQYSLTDWNGYSQDPNFVGLDN YKTVLTNPNYFSVFKTSLYYFIATFFQLGIALLFATILSFKVKFANFWKGILFFPYLLNG VAIGFIFLYFYKGGGTLDTVLKAVGLGDQIRLWLGDRSINNISLAFTSVWRYTGFNFLVF LGAIQSINPEVYEAAEIDGANRWDQFRYIIIPSIRNIVFLNIILGVSGSLSVFDIPYIMT GGSNETSTFVIQTIDTAFKYNKVGLASAMAIILLFIVIVVSLIQKVVTSERKNV >gi|304427355|gb|AEEM01000003.1| GENE 86 88959 - 89786 801 275 aa, chain + ## HITS:1 COG:BH1866 KEGG:ns NR:ns ## COG: BH1866 COG0395 # Protein_GI_number: 15614429 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 2 270 10 278 285 125 29.0 6e-29 MKTKKITFGKILQYLILLIGATVAILPILVVFIGSFKSNTEFLSTGVLELPKSLDFSNYK TAFVNGQMLLGFKNTLVIFVVSMVGKLTLASMFAYAVSRFDFKLKKLILTLFMLAMLIPS ITSQVATFQIINSLGLFNKIWSVILLNLGTDVISVYVFLQYLDEIPISLDESAYLDGASH FGIFWRIILPNLKAPIVTMLIISGVGVYNDFYNPFLYMPDRNLKVISTALFAFKGPYGTN WPVILAGVVIVILPILIVFLSLQKYIYNGVAGSVK >gi|304427355|gb|AEEM01000003.1| GENE 87 89820 - 90404 185 194 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0166 NR:ns ## KEGG: GALLO_0166 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 194 1 194 194 310 100.0 1e-83 MTEKSSRLIDAVNLVYTVMKGSVLFWLALLSRGFVYGWVFAIKIVSLYFTSENPQTLRFR DLLKQKESIPYAKVISAMMTFFFSLGLTGWLLSLVNISQLSFAMFYIGGLAWLVWLVIVI YYVKTQSSSGENQFYQSLLEMKQDFQKVILAFLLAFIFVWLTLTKTMLGWLLFPGIYFYL VGRIQKVQFKGVKS >gi|304427355|gb|AEEM01000003.1| GENE 88 90401 - 92632 2057 743 aa, chain + ## HITS:1 COG:BH2223 KEGG:ns NR:ns ## COG: BH2223 COG3345 # Protein_GI_number: 15614786 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Bacillus halodurans # 2 742 3 744 748 721 49.0 0 MILINEEELSFHLTNGKVSYVFRVMERTGILEQLYCGPAISDYESFTFLIEREIRPGNNL YMGSSLMSLEHIKQEYPVFGTTDFRYPALEIQYPTGDLISHFRYVGYRIEKGKTVTGALP GTFGNEEDVETLIVCLKDDYADLELELHYAIYANYPIITRQQKIINKDTQTLSIKRFASF SLDLPNENYDWVHLDGAWARENHLSRSSIQKGIQNISSMRGHSSHVHNPFLAICSPEATE NNGQVYGFSLIYSGSFLAQIESDNYNTLRIQMGINPFQFDWQLHPGQLFESPEAVLVVSQ SGFNGMSQVFHDFYKEHLIRSSWKNKKRPVLLNSWEAMYFDFNQEKILEVAEEASKLGIE LFVLDDGWFGKRNSDTGSLGNWTENKEKLPDGLAHLAKAIKEKGMLFGLWFEPEMVSDDT DLFKEHPDWVIGNPEKNISHGRNQFVLDFGNPEVVEAIYNQMAHLLSTVPIDYIKLDMNR YISESFSSHLPSKQQGEVNHRYILGVYSLYEKLNQAFPDVLIESCAGGGARFDPGMLYYS PQIWTSDDTDAVERLTIQWGTSMVYPLSTMSAHVSAVPNHQVARVTSLDMRKDVAMFGVF GYELNPLALTEEEKEAVKAQIKEYHTYQELIQNGIFYRLDLTDKNHVGWLVVNKERTEAL VGYYTILAQPNPIYERLKLVGLNPDKAYHILGKDKDEVRYGRDLASIGIILGKNYIGRES EYWSREMPGDFNGKIYYLQQIDK >gi|304427355|gb|AEEM01000003.1| GENE 89 92690 - 93421 844 243 aa, chain + ## HITS:1 COG:BH3917 KEGG:ns NR:ns ## COG: BH3917 COG2188 # Protein_GI_number: 15616479 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 239 21 256 261 177 40.0 1e-44 MSRGEKMEKYNLIANDVRKKILEGVYQPNEQLPFEKDLCQFYDVSKMTVKKALDMLVAEG LIYKRRGAGTFVMDLSVEKMEKMLMDIQMMGTTAFYPDKNITSKVIDFSVVKATPEIADK LKIKETSFVYKIHRVRIVDDKPTVIEETYMPIDLINGLKLEHVESSIYDYIESGLGLKIQ SGHRTITVRRATDMEAEYLDLEKGDPVAIAVQTGYLSTGAAFEYSISTHRYDEFSVEIVL THN >gi|304427355|gb|AEEM01000003.1| GENE 90 93455 - 94318 261 287 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 3 281 5 315 319 105 26 2e-21 MNLVVFDIGGTSVKYGLYQDGSIEKKSSFATPKTWDEMKENLYQVFKELSDADTKGVAIS SPGAVDTEEGVIKGLSAIPYIHRFKIVDELEALFGLPVAIENDANCAGLAESKFGIGQDS KNALYFIIGSGIGGAVCQNGQLYKGSSLFGGEFGYMIIENGKTLSTLASPVQVADRYAKA HGLTDFSGKDLFDLADNGNEEAKAALAGLYDALATGIFNCLVSFNPDLVGIGGGISVRPD LVSELDKRIQKLIHDTEANELTYELKICQFKNDANLLGAVSNFLNTK >gi|304427355|gb|AEEM01000003.1| GENE 91 94327 - 94965 803 212 aa, chain + ## HITS:1 COG:lin0495 KEGG:ns NR:ns ## COG: lin0495 COG2755 # Protein_GI_number: 16799570 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Listeria innocua # 8 205 3 193 197 162 46.0 4e-40 MEIRKHDRIVFFGDSITEWGRDKSNPDSLGHGYVSIVAADLLDRSPELGLHFYNRGVGGD KVQDLLNRVDDCLSCQPDAVILMVGINDVWHLVGKDGFASQEEQQRFENVYRQLLQALKQ AGIERILLMEPFVLDYPEDRMEWRRDLDPKIQIVRHLAREFKLELVPLDGLMNEQALLYG RRELTGDDGVHPTLAGANIIAQEILRRLTFIY >gi|304427355|gb|AEEM01000003.1| GENE 92 94981 - 95937 937 318 aa, chain + ## HITS:1 COG:BH3326 KEGG:ns NR:ns ## COG: BH3326 COG3458 # Protein_GI_number: 15615888 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acetyl esterase (deacetylase) # Organism: Bacillus halodurans # 7 315 8 316 319 305 46.0 5e-83 MKTEDALREWGNYQGRQDKPDDFDDFWDKAKKEVDSLGLHYELTPTDFTSKVAECYDLYF TGVHESKIYAQLLLPKKSSAKHPVIFQFHGYHSDVGDWSDKLAFVSEGYVVVALSVRGQG GESEDRLQTSGGTLKGHLIRGIEDGPEKLFYRAVFQDVYQLTNVVSRLPFVDSSKMASYG VSQGGALALVCAALCPKVKRTFVQYPFLSDYRTAYGLEVTQSAYEELAYYFRYRDPLHER EKAVFAALDYVDIQYLVDRIQAEVIWAMGLEDRVCHPKTQFAVYNHIQAPKKLYFYPEYG HEYLPKFNDKIHQILGGK >gi|304427355|gb|AEEM01000003.1| GENE 93 96215 - 98434 2333 739 aa, chain + ## HITS:1 COG:SPy1981 KEGG:ns NR:ns ## COG: SPy1981 COG0317 # Protein_GI_number: 15675772 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Streptococcus pyogenes M1 GAS # 1 739 5 743 743 1267 87.0 0 MAKTVNLTGEEVVALTAQYMSESDVAIVQKALDYATKAHISQVRQSGEPYIIHPIQVAGI LADLHLDVVTVACGFLHDVVEDTEVTLDDIEAEFGKDVRDIVDGVTKLGKVEYKSHEEQL AENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGI SRIKWELEDLSFRYLNEIEFYKISHMMNEKRREREALVDEIVKKIKDYTQEQGLYGEVYG RPKHIYSIYRKMRDKKKRFDQIYDLIAIRCIMETPSDVYAMVGYIHELWRPMPGRFKDYI AAPKANGYQSIHTTVYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKQGIKGKVDNQEQAV GMNWIKELVELQDASNGDAVDFVDSVKQDIFSERIYVFTPTGAVQELPKDSGPIDFAYAI HTQVGEKAVGAKVNGRMVPLTAKLKTGDVVEIVTNPNSFGPSRDWIKIVKTNKARNRIRQ FFKNQDKETSINKGRELLVDYFQEQGYVANKYLDKKHIEEILPRFSVRSEEALYAAVGFG EISAASVFNRLTEKERREEERAKAKAEAEELMNGGEVKTENKDVLKVRSENGVIIQGASG LLMRIAKCCNPVPGDPIEGYITKGRGVAIHRADCHNIKSQEGYEQRLIEVEWDDTSASND YLAEIDIYGLNRSGLLNDVLQVLSNATKNISTVNAQPSKDMKFANIHVSFAIPNLTALTT VVDKIKIIPDVYSVKRTNG >gi|304427355|gb|AEEM01000003.1| GENE 94 98494 - 98937 505 147 aa, chain + ## HITS:1 COG:SPy1980 KEGG:ns NR:ns ## COG: SPy1980 COG1490 # Protein_GI_number: 15675771 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Streptococcus pyogenes M1 GAS # 1 145 1 145 147 217 78.0 6e-57 MKVVIQRVKKAQVVIDEELVGDIKQGLLLLVGVGPDDEQEDLDYAVRKITNMRIFSDDMG KMNLSVQDVKGSILSVSQFTLFADTKKGNRPAFTGAAKPDKAEQLYNAFNEALAQCVPVE TGVFGADMHVSLVNDGPVTIILDTKAR >gi|304427355|gb|AEEM01000003.1| GENE 95 99026 - 99874 635 282 aa, chain + ## HITS:1 COG:SPy1978 KEGG:ns NR:ns ## COG: SPy1978 COG2508 # Protein_GI_number: 15675769 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Streptococcus pyogenes M1 GAS # 1 280 1 280 282 187 36.0 2e-47 MSLDELFPEATSKGNIQNPEEWLILEENGTPYYLPLASLSEREKALLTLKKTTISASRVS ENPWYQYLVQKKGSLPQEYKRLQMIYIDHQYRLPEELVDFLATLLPNMITEVSLSDNRTI LLLDQSEPIEVEELVKDVLPTLESDFGIKLTVFFGNSWSKLQANDLQAYFDEETKLFSDV SHYRGNERVATFSEMLLLDFARHLDIPTIKHKILQSIDDSKDIRAIIVAMWQEQGNLAKT AQSLYIHRNSLQYKLEKFRLLSGLNLKNLDSLAFCYLLIMMP >gi|304427355|gb|AEEM01000003.1| GENE 96 99975 - 101108 1605 377 aa, chain + ## HITS:1 COG:SPy1976 KEGG:ns NR:ns ## COG: SPy1976 COG3839 # Protein_GI_number: 15675768 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Streptococcus pyogenes M1 GAS # 1 377 1 377 377 634 83.0 0 MVELNLNHIYKKYPNASHYAVEDFDLDIKDKEFIVFVGPSGCGKSTTLRMVAGLEDITEG ELKIDGEVVNDKAPKDRDIAMVFQNYALYPHMTVYDNMAFGLKLRKYKKDDIDKRVREAA EILGLTEFLQRKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRAEIAK IHRRIGSTTIYVTHDQTEAMTLADRIVIMSSTKNPDGSGTIGRVEQIGTPQELYNRPANK FVAGFIGSPAMNFFEATVEGDTLINDAGFKITLPEGQKKLLETKGYNGKKVIFGIRPEDI SNNPLVRDTYPGATIKAEVTVSELLGAETMLYVKSGDVELVSRTDARDTYEPGEQVELTL NVAKGHFFDPETEAAIR >gi|304427355|gb|AEEM01000003.1| GENE 97 101435 - 102205 834 256 aa, chain - ## HITS:1 COG:SPy1712 KEGG:ns NR:ns ## COG: SPy1712 COG1349 # Protein_GI_number: 15675565 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 256 1 253 256 293 59.0 2e-79 MLKKERLQWILEKVNAKGVITVNDVIKELGVSDMTVRRDLDELDKDGLLIRIHGGAQSID SPKIRSKHEKSNTEKQELQIEEKRAIAKFASQLVQEGETIFIGPGTTLEHFASELVAKNI RVITNSLPVFNILNENKNTDLILTGGEYRDITGAFVGSLTANYLQNLKFSKAFVSANGVF GDSIATYSESEGEIQRIALDNAIETFLLVDHEKFDKYDFYDFYRISDINHLVTDSAITSD TKEKFGQLTDIIVAKD >gi|304427355|gb|AEEM01000003.1| GENE 98 102513 - 102938 657 141 aa, chain + ## HITS:1 COG:SPy1708 KEGG:ns NR:ns ## COG: SPy1708 COG0698 # Protein_GI_number: 15675561 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Streptococcus pyogenes M1 GAS # 1 140 1 140 141 194 75.0 5e-50 MTVILGSDAAGETLKNIIKEYLLANDYDVNDVTDVTKDFVDNTLAVAAGVNAAEGNLGIM IDAYGAGSFMTATKVKGMVAAEVSDERSAYMTRAHNNARMITMGAEIVGVELAKNIAKGF LEGHYDGGRHQIRVDMLNKMC >gi|304427355|gb|AEEM01000003.1| GENE 99 102955 - 103470 632 171 aa, chain + ## HITS:1 COG:SPy1707 KEGG:ns NR:ns ## COG: SPy1707 COG0698 # Protein_GI_number: 15675560 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 171 171 305 87.0 4e-83 MKIAIGCDHIVTTEKMAVSDFLKSKGYEVIDCGTYDHTRTHYPIFGKKVGEAVTSGQADL GVCICGTGVGINNSVNKVPGIRSALVRDMTTAIYAKEELNANVIGFGGKITGELLMCDII EAFIEAEYKPTAENKVLIEKIAQVETVNEDQTSPDFFDEFLEKWDRGEYHD >gi|304427355|gb|AEEM01000003.1| GENE 100 103482 - 104414 985 310 aa, chain + ## HITS:1 COG:SP1191 KEGG:ns NR:ns ## COG: SP1191 COG1105 # Protein_GI_number: 15901056 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Streptococcus pneumoniae TIGR4 # 1 310 1 309 309 410 67.0 1e-114 MILTVTLNPSIDISYPLDELTLDTVNRVSEVKKTAGGKGLNVTRVLSEIGDNVTATGFIG GKLGDFLTSRLDQNGIQHRFFPIHGETRNCIAILHEGLQTEVLEAGPMIDRDEADGFLNH FRYLCPSYDVITISGSLPAGLESDYYQKVVGLANSQGKKVVLDCSGKALEAVLTGDDKPF VIKPNTEELSQLVGREVTGDVDELKEILQADLFAGIDWVVVSLGSKGAFAKHGDHYYRVT IPKIDVVNPVGSGDSTVAGIASAIIHNFSDKDFLRHANALGMLNAQEKMTGHVNMTNYEN LFNQIQVEEV >gi|304427355|gb|AEEM01000003.1| GENE 101 104421 - 105398 1396 325 aa, chain + ## HITS:1 COG:SPy1919 KEGG:ns NR:ns ## COG: SPy1919 COG3684 # Protein_GI_number: 15675728 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Streptococcus pyogenes M1 GAS # 1 325 3 327 327 508 80.0 1e-144 MVLTQEKRRLLEKLSRDGVISALAFDQRGALKRMMANYQTEEPSVEQIEQLKALVSEELT PYASSILLDPEYGLPASKVRDVNAGLLLAYEKTGYDATTTSRLPDCLVEWSAKRLKEEGA DAVKFLLYYDVDGDEYVNLQKQAYIERIGAECKAEDMPFFLEILTYDENITDNTSAAFAK VKPHKVNEAMKVFSDDRFGIDVLKVEVPVNMKYVEGFADGEVVYTKEEAAKAFKDQEAAS HLPYIYLSAGVSAKLFQETLVFAAESGAKFNGVLCGRATWAGSVQVYIEEGEAAAREWLR TQGRKNIEELNAVLTKTAGSWSEKV >gi|304427355|gb|AEEM01000003.1| GENE 102 105411 - 105884 445 157 aa, chain + ## HITS:1 COG:CAC2958 KEGG:ns NR:ns ## COG: CAC2958 COG1762 # Protein_GI_number: 15896211 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Clostridium acetobutylicum # 1 155 5 157 164 122 42.0 3e-28 MTQLFAEDTVYISEQQDQKSVFKEIAHKLFEKGLVTEEYLDNLIDREEHYPTALPLSPID SSLPNIAIPHTESQFVNVTRIVPVKLEHAITFHNMILPDEKLEVSFLFMILNNEEKEQAG LLAAIMDFINRQDKEALIKFFNSENPERIYQFLENNF >gi|304427355|gb|AEEM01000003.1| GENE 103 105898 - 106200 566 100 aa, chain + ## HITS:1 COG:SPy1710 KEGG:ns NR:ns ## COG: SPy1710 COG3414 # Protein_GI_number: 15675563 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Streptococcus pyogenes M1 GAS # 1 95 1 95 101 142 70.0 2e-34 MIKILAACGAGVNSSHQIKNALETELTKRGYQVSCDAVMIKDINEELLSHYDIFAQISKT DLGFDVKIPVVDAGAILYRIPAMAEPVYKKMEDVINSLNK >gi|304427355|gb|AEEM01000003.1| GENE 104 106236 - 107636 1633 466 aa, chain + ## HITS:1 COG:CAC2956 KEGG:ns NR:ns ## COG: CAC2956 COG3775 # Protein_GI_number: 15896209 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Clostridium acetobutylicum # 1 466 1 467 470 569 66.0 1e-162 MNVIIDFANTIFQPIIDLGAAPLMTIILTVIALFFKVKFTKALEGGIKLGIALTGISAII NILSTAFSGAMADFVARTGLELNITDVGWAPLATITWGSPYTLYFLMVMVIVNIIMLVLN KTNTLDVDIFDIWHLSIVGLFAIYSGANLMIATILVIFIGILKIINSDLMKPTFNDLLGA GDENPMTTTHMNYMMNPIIMVFDKIFDKLFPWLDKYDFDAAKLNAKIGFWGSKFAIGIYL GIFVGLLAGQTPTEIASLAFTAAVCLELFSLIGSWFIASVEPLSQGITDFASSKLQGRTL NIGLDWPFIAGRAEVWAAANILAPIMLLEAIVLPGNKLLPLAGIIAMGVTPALLVVTRGK LIRMIVIGAIELPLFLWSGTLIAPFITETAKNVGAFPSGLDTSTMISHTTMEGPIEKFLA FFVGKASTGDLTYVLYAAIALVVYTLLFFWYKGEMKKRNQAYQEAK >gi|304427355|gb|AEEM01000003.1| GENE 105 107746 - 108642 881 298 aa, chain + ## HITS:1 COG:CAC3032 KEGG:ns NR:ns ## COG: CAC3032 COG2017 # Protein_GI_number: 15896283 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Clostridium acetobutylicum # 1 297 1 296 298 181 35.0 2e-45 MVIELKNDFLTVQFKEFGGALSSIKDKDGVEYLWQGNPEYWSSQAPVLFPICGSLRDDEA IYRPSSRPHFTGVIPRHGLVRKKAFTYESLSENSLAFSITPDAEMLANYPYDFELKIIYT LIGKTIKTSYQVTNRETEKVMPYFIGGHPGFNCPLLADECYEDYYLEFEKEETCTVPESF PETGLLDVNKRTPFLEKQNILNLDYALFAKDAITLDKLASRSVSLKSHKHDKGLRLDFED FPNLILWSTVNKSPFIALEPWSGLSTSLDESDILEDKRQVTFVASGEVSKKSFDITIF >gi|304427355|gb|AEEM01000003.1| GENE 106 108847 - 109683 837 278 aa, chain + ## HITS:1 COG:SP1187 KEGG:ns NR:ns ## COG: SP1187 COG3711 # Protein_GI_number: 15901052 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pneumoniae TIGR4 # 1 277 1 277 278 287 53.0 2e-77 MFRIVQALNNNVALVKNEQDEQAVVMGLGIVFQKKKGDLITPSKVEKVFLLKTEESKENF LTLLKNIPLDILTVTYNMIDDLVAKYHFPVQEYLYVTLTDHVYSVYQKLLKGAYQESHLP DISAAYVTEFQMAQEAVAILSQKLSVTFPDDEVGRMALHFINAKGDYEVSDNSKEDATKK VLALIENELAKNNIKRSAENSNLYDRLMIHLTYLINRLQMNQQDNASLINLEEYVKSDYP QAYQIGQAIYDLIEQELKIDLSRSERVYLVIHIQRLLK >gi|304427355|gb|AEEM01000003.1| GENE 107 109694 - 111094 1499 466 aa, chain + ## HITS:1 COG:SPy1916 KEGG:ns NR:ns ## COG: SPy1916 COG2723 # Protein_GI_number: 15675725 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 4 466 5 468 468 602 60.0 1e-172 MYQLPEDFIFGGATAAYQVEGATKEGGKGPVAWDDFLAEQGRFSPDPASDFYHQYPQDIE LCEKFGVNGLRLSIAWSRIFPNGTGEVNQEGVDYYHKVFAECQRRNITAFVTLHHFDTPK VLFDNGDFLNRDTIEAFVNYAKFCFEEFTEVRHWSTFNEIYPVATNQYLLGIFPPGIKYD LSKVIQCLHNMMYAHARVVNLFKDGGYQGEIGVVHSLETKYPATDSKEDKHAAFLDDALS IRFLLDATYLGYYSNETMEALNEICAANNASYDFLDSDFEEMKKASHRNDYLGINHYQCH FVKAYNGENAIHHNGTGDKGTSVYKVKGIGERIYKEGIPRTDWDWIIYPEGLYDLLLRIK ADYPHYNKIYITENGMGYKDEFDDGIIMDQPRIDYLKVYLQSLAKAIDAGVNVKGYFLWS LMDLFSWSNGYNKRYGLFYVDFETQKRYPKASAYWYKHISDTKIVE >gi|304427355|gb|AEEM01000003.1| GENE 108 111107 - 111418 481 103 aa, chain + ## HITS:1 COG:SP1186 KEGG:ns NR:ns ## COG: SP1186 COG1447 # Protein_GI_number: 15901051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 101 1 101 105 106 54.0 1e-23 MDKKELQMLGFEIVAYSGDARSTLLQLLKEVRSGNFDNVDKAIKDADENLAKAHNAQTQL LAQEAGGEDLELGFIFVHGQDHLMTTLLLRDLITDFIELYKNR >gi|304427355|gb|AEEM01000003.1| GENE 109 111660 - 113339 1970 559 aa, chain + ## HITS:1 COG:SPy1917 KEGG:ns NR:ns ## COG: SPy1917 COG1455 # Protein_GI_number: 15675726 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Streptococcus pyogenes M1 GAS # 1 558 1 563 565 610 58.0 1e-174 MNKLIQQIEKGKPFFEKVSRNIYLGAIRDGFLAAMPAILFSSIFILIASIPDVFGVTLPE DFSNWLWKIYNYSMGVVALLVSATTARCLAESVNRKMPGNKKINAVSVMLASIVSFLMLS ADELDGGLASGYMGTKGILAAFVAAFITVNVYKFCVIRDITIKMPKEVPGTISQTFRDIF PFSFAVFAAVIIDTIIRYFFGTSFAEAVITLLQPLFTAADGYLGIAIIWGAMALFWFVGV HGPSIVEPAIAAIIYANVETNLQLFKAGEHASNVLTVGLGNFVGTMGGTGATLVVPYLFL LFAKSKQLKAVGKASFIPVSFAVNEPLLFATPIILNPYFFVPFLLAPIANVWIFKFFVDV LQMNSFMYVLPWATPAPIGLILGTGVSLLAVVLVLVLIVVDAIIYFPFIKAYDASLLEEE AEIAAQETAAESVTPVKAVAEKVVEEKPAVKVTTDKPINVLVLCAGAGTSAMLANALTEG AAATGANITASAGAYGSHYEIMKDFDMIVLAPQVNSFYEDIKKDTDALGIKLAATKGAEY IKLTRDPEGAVAFVMSYFA >gi|304427355|gb|AEEM01000003.1| GENE 110 113370 - 114980 1508 536 aa, chain + ## HITS:1 COG:YPO0853 KEGG:ns NR:ns ## COG: YPO0853 COG3867 # Protein_GI_number: 16121161 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinogalactan endo-1,4-beta-galactosidase # Organism: Yersinia pestis # 29 387 38 400 400 381 53.0 1e-105 MKILKKIFLTTVALIGLAALGTTVTKADEFINGADISILDEMEQSGAIYKSNGTQKDPLT ILKENGVNYVRLRLWVDPYDANGNAYGAGTNDLNRTLKLAKRAKDKGLKVLLDFHYSDFW VDPGKQNLPKAWQNQSFEQLNSTVYSYTADVLNQMKSQGIYPDMVQIGNELNSGMLWPYG KSWGGDGQEFTRLATFLKSGVQAVKDTQTSNTPIMLHLADGGDKSAFQWWLDEITNQSVD FDIVGISYYPYWHGTLAELSENMDNISERYNKKVVVVETAYANTLDNADQKTNAFTATEE TAGGYKASQDGQYEFLTDLVDKIKDVKNNNGLGFFYWEPLWYNGNVSWATQAGMSYLGVS DMTGNEWENQAVFDFSGNALRAVKAFNYANLTNVVANNSFEWDGYTETPSSWNKWTNSQN AGIKTEVYDDTRYKLTFWSDTAFESSIYQTISNLGSGTYKLSIDAMGDTSLETAQLYIKN YGGSEQNISLKDSSTWKTYTIDNIQITNGQCEIGIYVNASANKWLNIDNVRLVKVD >gi|304427355|gb|AEEM01000003.1| GENE 111 115076 - 115909 640 277 aa, chain - ## HITS:1 COG:SP1899 KEGG:ns NR:ns ## COG: SP1899 COG2207 # Protein_GI_number: 15901726 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 7 273 4 273 286 200 38.0 2e-51 MNVLNTYNEFDTNNFDLNVDHYGAEICDKNYSFGPTIRDNFVLHFIVDGKGKFTIDGQTT ELGVGDMFILPKGKVTFYQADKEHPWTYLWVGFSGSKAESILSKTQLLEQYFCHSTLKSR VLDQIVKLTQFRDQKLDDVTELQLIAELYKLLAYLIEESPSKAISDGSILIQNYIRQTKK IIHSQYGTSLKVGEIADKLNLNRSYLYKIFKEETGYSIKDYIIQVRMEKSADLLTNTTFH ISEVANAVGFTDGLTFSKAFKKYFNQSPSNYRKTLKN >gi|304427355|gb|AEEM01000003.1| GENE 112 116020 - 118197 2153 725 aa, chain + ## HITS:1 COG:SP1898 KEGG:ns NR:ns ## COG: SP1898 COG3345 # Protein_GI_number: 15901725 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 719 1 719 720 1040 68.0 0 MGITIKGNLFYIQSKEMSMIIENREGDLLLRHIGGKIANYHGSNAIFEKDHAFSGNPTPD NRTFSYDTQRQIFGVHGFGDFRCPSLKIQHDNNELTQFKLKDSHILHGVVEATGLPSPHS MEGAETLVFILEDEFAKLRLTLYYTAYADRATISTFAKISNLSDKAVIINRALSTMLDVP AGNYDVVTLQGAYAREKTVRRQMVEQGIFSIASNRGASGHAQTPAVILCDRTATEDAGSA LALQLLYSGNFQAFVQKNQLNEVRLGIGINDDNFAWQLAARDNFETPVALMTYSAKGLTH LSQESQLFVQNHIMPKQFAHVERPILINNWEATYFAFKQEKLLDLVDEASRLGIELFVLD DGWFGNRFDDNRALGDWGVNEEKLGGPLSDLIDKVHAKGLKFGLWFEPEMISVDSDLYRT HPDWAIQAEGRAHTYSRNQLVLNLANPDVVAYIKLAIDKILTENAIDYVKWDYNRNITNI GNGDSALATKMQSHAYMLGLYDLVSYLTGKHSNILFESCSGGGGRNDLGMMRYFPQVWAS DNTDAISRLQIQYGSSYLYPTISMGSHVSASPNHQMGRTTPIETRGNVAMMGNLGYELDL TSLPESEKEVIATQVSHYKDIRPVVQFGKHYRLINPEQGANEAAVQFVYEDKVVVTYVRT LSMIETIETTLKLKGLEEADTYRLQETGQVFSGAELMYAGLTVTLPQGDYLSKQYYFVKQ KGGFQ >gi|304427355|gb|AEEM01000003.1| GENE 113 118194 - 119465 1242 423 aa, chain + ## HITS:1 COG:SP1897 KEGG:ns NR:ns ## COG: SP1897 COG1653 # Protein_GI_number: 15901724 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 422 1 419 419 485 57.0 1e-137 MKWRKQLIAAGIVALATTAGLILTACSKEDDTSADGKVTIEYFNQKTEMVDTLKEIIKDF EAENPNIHVKMTSVPSAGTVLKTRMLAGDAPDVINIYPQNVDFKEWAKAGYFEDMTGKSY LENIKNNYAENYAVNGKIYSVPLSANVSGIYFNKTKFDELGLKVPETWDEFETLVKQIKA DGETPFALAGSEGWTLNGYHQLAYISVTGSGDKANDYLRFSPVNSISTSDNEVKEVLTRL DLLADKGNQQSNWEGASYNDSVVAFATEEALMLPGGSWVLAAIKQQDPDFEISTFAFPGE KTGQEVTVGAGDLALSISSSTKHKKECEKFISYMASAEAMQKYYDVDGSPVSVEGVVEDD NSPLAPLYQLAFTDKHYVWLGENWTSEEDFFSLTANYLLNQDADQYVSELNAFFNPMKAD VNK >gi|304427355|gb|AEEM01000003.1| GENE 114 119478 - 120344 1038 288 aa, chain + ## HITS:1 COG:SP1896 KEGG:ns NR:ns ## COG: SP1896 COG1175 # Protein_GI_number: 15901723 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pneumoniae TIGR4 # 1 288 9 296 296 396 75.0 1e-110 MRKFLNKYWGWTFLIIPLMLQAIFFYFPMFQGAFYSFTNWTGLTYNFDFVGINNYKILMT DSKFFKALGFTLILTLALIVGEIVIGIWVARALNAKIKGQTFFRAWFFFPAVLSGLTVSL IFKQVFNYGLPAIGEVLNIEFLKTSLLGTSGGAIFAAIFVMLWQGVAMPIILFLSGLQTI PSEITEAAAIDGANSKQTFWNIELPYLLPSISMVFIMALKAGLTAFDQIFALTGGGPSNS TTSIGLLVYNYAFSSNQYGYANAIALILFAIIVLVSVLQLKLSSRFEV >gi|304427355|gb|AEEM01000003.1| GENE 115 120357 - 121190 811 277 aa, chain + ## HITS:1 COG:SP1895 KEGG:ns NR:ns ## COG: SP1895 COG0395 # Protein_GI_number: 15901722 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 277 2 278 278 390 75.0 1e-108 MKKEERYHTFWKYVLLVMGSILILIPLLATVFSSFKTTKDIMQHFFAFPNPITLSNYTRL LADGIGHYFWNSTIITVVSVILVTLFIPAAAYSIARNMSKKRAFNIMYSLLILGIFVPFQ VIMIPITVMMSRLGLTNIWGLIILYLTYAVPQTLFLYVGYIKLSVPESLDEAAEIDGADK FTTYRKVVFPMLKPMHATTLIINALWFWNDFMLPLLMLNKSSESWSLPLFQYNYTGQYLS DYGPSFASYVVGIITITIVYLIFQKHIISGMSNGAVK >gi|304427355|gb|AEEM01000003.1| GENE 116 121579 - 123024 1761 481 aa, chain + ## HITS:1 COG:SP1894 KEGG:ns NR:ns ## COG: SP1894 COG0366 # Protein_GI_number: 15901721 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 1 480 1 480 480 790 82.0 0 MGIQNKTMLITYSDSLGKNLKELKQNLDKYFGEAVGGIHLLPFFPSTGDRGFAPVDYDEV DSTFGTWDDVKGLGENYYLMFDFMINHISRQSKYYKDYQEKHEASAYKDMFLNWDKFWPE NRPTQVDVDLIYKRKDRAPKQEIHFTDGSVEHLWNTFGEEQIDLDVTKEVTMDFIRKTIK HLAENGCDLIRLDAFAYAVKKLDTNDFFVEPDIWELLDKVRSIAAESGTELLPEIHEHYS IQFKIAEHDYYVYDFALPMVTLYSLYSRKVDRLAKWLKMSPMKQFTTLDTHDGIGVVDVK DILTDDEIDYTSSELYKVGANVKRKYSSAEYNNLDIYQINSTYYSALGDDDKKYFLARLI QVFAPGIPQVYYVGFLAGKNDLDLLEKTKEGRNINRHYYTNEEIAEEVRRPVVQALLKLF TFRNQSAAFDLDGSIDVEILDENTLVITRRNQGSSVVAEAQINLKELSYAVKENGEEVTF L >gi|304427355|gb|AEEM01000003.1| GENE 117 123143 - 124753 1315 536 aa, chain + ## HITS:1 COG:SPy1973 KEGG:ns NR:ns ## COG: SPy1973 COG0366 # Protein_GI_number: 15675767 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pyogenes M1 GAS # 1 535 1 535 537 829 74.0 0 MEKHWWHKATIYQIYPKSFKDSNGDGIGDLQGIISKLDYLQKLGITAIWLSPVYQSPMDD NGYDISNYEAIADIFGDMSDMEELLAQAKARGIRIIMDLVVNHTSDEHAWFVEARENPAS PYRDFYIWRDEPNELDSIFGGSAWAYDGKTGQYYLHFFSKKQPDLNWENLELRKSVYDMM NRWIDKGISGFRMDVIDMIGKMPDRLISNNGPKLHDYLKEMHQETLAGKDLLTVGETWGA TPEIAKQYSSPDEKELSMVFQFEHIGLQHKPNASKWEYEKELNVPALKAIFNKWQTELEL GQGWNSLFWDNHDLPRVLSIWGDIDTYREKSAKALAICLHLMRGTPYIYQGEEIGMTNYP FKDLGEIDDIESLNFAKEALENGKTSEEVLDSIRMIGRDNARTPMQWDSSKNAGFSTADK TWLPVNPNYQDINVQAALDNPESIFYTYQKLIKLRKENEWLIDADFELLETADKVFAYLR KTADATYLVVANLSDQAQPFECDLSYQATIISNTAELADFENHQLQPWDAFCVKVG >gi|304427355|gb|AEEM01000003.1| GENE 118 124800 - 125807 1088 335 aa, chain - ## HITS:1 COG:SP1854 KEGG:ns NR:ns ## COG: SP1854 COG1609 # Protein_GI_number: 15901682 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 331 1 331 335 417 63.0 1e-116 MATLKDIAKLAKVSSATVSRVLNQDATLSVSEETRHRILTVAEELGYEKHKRSTNILQER QKIAIVQWYSEQEELNDLYYYSIRIGLEKRAQELDYDIIRYFNNDILTISENICGIIAIG KFSSAQISKLEKLSQNLVFVDSDTLNAGHPCVTTDFDNAVIKVLDYFMDQGFTKIGMIAG EERTTDQQELIVDQRFRTFKNYAYENNLYNPNYVFVGDFSAQAGYELMKKAITELGNDLP QAFFVANDTLAIGALRALQEASIIVPDRVSLISFNDTPLTKQVFPALSSITVYTEEMGRT AVDILNRQLINHNTIPTMTRLATTLTLRDSTNKRR >gi|304427355|gb|AEEM01000003.1| GENE 119 125958 - 127130 1712 390 aa, chain + ## HITS:1 COG:SP1853 KEGG:ns NR:ns ## COG: SP1853 COG0153 # Protein_GI_number: 15901681 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Streptococcus pneumoniae TIGR4 # 6 387 10 391 392 605 81.0 1e-173 MKVTELKEAFTAVFGNEADATFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDD QTLRFYSANFADLGIIEVDLANLVFDKKDSWTNYPKGVIKFLQEAGHTINTGFDLYVNGN IPNGSGLSSSASLELLVGIVAEELFDLNLDRLDLVKIGKQTENEFIGVNSGIMDQFAIGM GADKQAIYLDTNTLEYDLVPLDLGDNVIVIMNTNKRRELADSKYNERRAECEKAVEELNQ VLDIKTLGELDLQAFDEYSYLIKDANRLKRARHAVWENQRTLQAKEALIAGELEKFGRLV NASHVSLEHDYEVTGIELDTLAHTAWQQEGVLGARMTGAGFGGCGIAIVAKDKVDEFTQN VGKVYTEIIGYAPVFYIAEIAGGSRVLSRK >gi|304427355|gb|AEEM01000003.1| GENE 120 127150 - 128619 1571 489 aa, chain + ## HITS:1 COG:SP1829 KEGG:ns NR:ns ## COG: SP1829 COG4468 # Protein_GI_number: 15901658 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 488 4 490 491 676 65.0 0 MKLLDTFVAKVIAVSDYTADDMFYLRNRVLALVGEEGAQQETKQTELIALKDELVDLAVQ NGKVGELVAEKDCLGAELMNFITPVPSQVNRKFWDTYAKSPQQAIAGFYALSKRNDYIKV AAIAKNIAFTTPSQYGDIQITINLSKPEKDPKAIAQAKLVKASSYPKCQLCMENEGYQGR INHPARANHRIIRMKLGDEKWGFQYSPYAYFNEHCIILNTEHVPMVISKDTFAQLLDIVD IFPGYFAGSNSDLPIVGGSILTHNHYQGGRHVFPMEIAELDREFHFKGFSDVKAGIVNWP MSVIRLRSADKNRLVELAETIRLAWRDYSDDSVDVVAYTGDTPHHTVTPIARKRRGLFEL DIVLRDNHTTAEFPNGVYHPHADVQHIKKENIGLIEVMGLAILPPRLKDELSEVEKYLLN QYNEIADYHKDWADNIKKRTDITAKSVHNIVQEEVGKVFVRVLEDAGVYKRDEKGQAAFM RFVDSVGLE >gi|304427355|gb|AEEM01000003.1| GENE 121 128629 - 129627 1335 332 aa, chain + ## HITS:1 COG:lin2620 KEGG:ns NR:ns ## COG: lin2620 COG1087 # Protein_GI_number: 16801682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Listeria innocua # 1 329 2 328 328 444 65.0 1e-124 MSILVLGGAGYIGSHMVDRLVEKGDEKVVVVDSLVTGHRAAVHPDATFYQGDLADQDFMR KVFTENPDIDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNEFGVKYIVFSSTA ATYGIPDEIPIKETTPQRPINPYGESKLMMETIMKWSDQAYGIKFVPLRYFNVAGAKPDG SIGEDHGPETHLLPIILQVAQGVREKIMIFGNDYNTPDGTNVRDYVHPFDLADAHLLAVK YLREGNPSTAFNLGSSTGFSNLQILEAARKVTGKEIPAELADRRPGDPDTLIASSDKARE VLGWKPQFDDIEKIIASAWAWHSSHPNGYNDR >gi|304427355|gb|AEEM01000003.1| GENE 122 129687 - 130556 729 289 aa, chain + ## HITS:1 COG:SP0590 KEGG:ns NR:ns ## COG: SP0590 COG0456 # Protein_GI_number: 15900499 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 7 280 6 283 294 254 46.0 1e-67 MEIIRANVLTDEELLAANELIKVVQAFDQTHRTPYLSNQLNFDADMAAFFLGYDEGKLVA LLTVYADCQEAELAILVHPNHRRKGYAKALWREFDEIRRDYQLRPIIMTEKCFLDKNPDL IRHLGMVLEPDFEYWLTREREPYPLEERTDLTVLEASTAHIEAIADFQMKAFKESKEQAL HYAKGALEDENGKLYTVMRGDTVLSSCTVDFSTDYNYFYGFAVVEDCRGQGIGTYFMKRL VNQLIAENEKAFQIAVESANIAAKSLYEKLGFKEQTQVFYAKKLTDFTR >gi|304427355|gb|AEEM01000003.1| GENE 123 130652 - 131023 587 123 aa, chain + ## HITS:1 COG:SPy1968 KEGG:ns NR:ns ## COG: SPy1968 COG1862 # Protein_GI_number: 15675764 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Streptococcus pyogenes M1 GAS # 4 121 6 120 121 108 55.0 2e-24 MGTIIMLVVLVGMIWFMQRSQKKQAQERQNQLKELAKGDEIVTIGGLYGVVDEVDEDNQK MVLDIDGVYLTFELSALKRVINRAEQETVEPETTVIEEATETEAVVEEATEEASTDTAIE SKD >gi|304427355|gb|AEEM01000003.1| GENE 124 131177 - 131926 867 249 aa, chain + ## HITS:1 COG:SPy1965 KEGG:ns NR:ns ## COG: SPy1965 COG0020 # Protein_GI_number: 15675763 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 249 1 249 249 415 78.0 1e-116 MFKFRKKEKAISLEKIPKHIGIIMDGNGRWAKKRMQPRVMGHKAGMDALQDVTIAASELG VKVLTVYAFSTENWSRPEDEVKFIMNLPVEFFDKYVPELDANNVKVQVIGETDRLPKDTF DAMKRACEKTKHNSGLILNFALNYGGRSEITEAVKNIAQEVLEAKINPDDITEDVISNHL MTNHLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELIKAIAEYN RRHRRFGGI >gi|304427355|gb|AEEM01000003.1| GENE 125 131939 - 132733 1010 264 aa, chain + ## HITS:1 COG:SPy1964 KEGG:ns NR:ns ## COG: SPy1964 COG0575 # Protein_GI_number: 15675762 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 264 1 264 264 360 73.0 2e-99 MKQRVIWGAIALLILLPFLLLGGLSFQVFAGLLAMIGVAEMLRMKRLEFFSIEGVLAMLG AFVLTVPLDNYFTSLPLDSSFSVYGLLVFLLLAGTVLNSDDYSFDDVSYPIAASLYVGIG FQNLVNARISGLDKVLFALFIVWATDIGAYMIGRRFGRRKLLPKVSPNKTIEGSLGGIVC AVIVALIFMLVDKAVYTPHNLFAMLIYVVLFSIFGQFGDLVESAIKRHFGVKDSGKLIPG HGGILDRFDSMIFVFPIMHLLGLF >gi|304427355|gb|AEEM01000003.1| GENE 126 132834 - 134096 1400 420 aa, chain + ## HITS:1 COG:SPy1963 KEGG:ns NR:ns ## COG: SPy1963 COG0750 # Protein_GI_number: 15675761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Streptococcus pyogenes M1 GAS # 14 420 14 419 419 565 69.0 1e-161 MLGILTFIIVFGILVIVHEFGHLYFAKKSGILVREFSIGMGPKIFSHIDKEGTAYTIRIL PLGGYVRMAGWGDDTTEIKTGTPASLTLNQDGLVTRINLSQKQLDNTALPMNVTAYDLED KLEITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQYQNATVWGRLITNFAGPLNNF ILGTIVFILLVFMQGGVQDTSTNVIQVTDGGAMQAAGVESGDRVLSIENYDISNWSDLTE AVTKATENISSGDTISVTVETSSGKTETLDITPKENNGSYYIGVSPELKTGFWDKVTGGF QMAWQSATAILTALKGLISNFSLDKLGGPVAMYQASSQAASNGLTSVLYLLALLSMNLGI VNLIPIPALDGGKILMNLIEIVRRKPLKQETETYITLVGVVIMLVLMIAVTWNDIMRVFF >gi|304427355|gb|AEEM01000003.1| GENE 127 134273 - 136114 2595 613 aa, chain + ## HITS:1 COG:SPy1962 KEGG:ns NR:ns ## COG: SPy1962 COG0442 # Protein_GI_number: 15675760 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 613 6 618 618 1075 86.0 0 MLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKAIMREEFEKIG AVEMLAPALLNADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTSLVRDAVKSY KQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHADYEGLDTTYEDYRKAYEAIF TRAGLDFKGIIGDGGAMGGKDSQEFMAITPDRTDLDRWLVLDKSIASIDEIPTDVLEDIK KELASWLVSGEDTIAYSTESSYAANLEMASNEYKPTTKVVAQEDVKRVETPDCKSIDDVA AFLKVDEEQTIKTLFFIADNEPVVALLVGNDQVNDVKLKNYLGADFLEPASEEEAVEVFG ANFGSLGPVNLPENVRIVADRKVQDVANAVVGANENGYHLTGVNPGRDFEAEYVDIREVK EGEISPDGKGVLKFARGIEIGHIFKLGTRYSESMGATILDQNGRAIPIVMGCYGIGVSRI LSAVIEQHARLFVSKTPKGAYRFAWGINFPKELAPFDVHVITVNVKDEEAQALTAKVEAE LVAKGYEVLVDDRNERVGSKFSDSDLIGLPIRVTVGKKAADGIVEVKIKATGDTIEVNAE NLIETLEILTKEN >gi|304427355|gb|AEEM01000003.1| GENE 128 136293 - 140687 4533 1464 aa, chain + ## HITS:1 COG:SPy1961 KEGG:ns NR:ns ## COG: SPy1961 COG2176 # Protein_GI_number: 15675759 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Streptococcus pyogenes M1 GAS # 1 1464 1 1465 1465 2588 84.0 0 MSELFKKLMEQIDMPLDMRQSSAFSSADIREVKVHSVSRLWEFHFSFAEILPIDIYRELS YRLVNTFKQADIRATFDIQAETVDFSQPLLQAYYEEAFEHAPCDSASFKASFSKLKVSYD GTKLLIEAPAFVNNDHFRKNHLPNLARQFEAFGFGKLTIDMVSDEAMTQALREDFTSNRE AMVEKAVQENREAVKSLEASMPPTEEAPKPKFDFKERAKQRRAGFENAEITPMVEVTTEE NRIVFEGMVFDVEKKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELKKYDMIAKGSWLR VRGNVENNNFTHALTMNVQDVKEIVHHDRKDLMPEGQKRVEFHAHTNMSTMDALPTVEEL IDTAAKWGHKAVAITDHGNVQSFPHGYHRARKNGIKAIFGLEANIVEDKVPIAYNPQDIE LNEATYVVFDVETTGLSAVNNELIQIAASKMYKGNIVEQFDEFINPGHHLSAFTTELTGI TDNHVRNAKPIEEVLQMFQDFCQDTVLVAHNATFDVGFMNANYERHGMPIITQPVIDTLE FARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEARENHNLTNMMD LNTKLVAEDSYKKARVKHATIYVQNQTGLKNIFKLVSLSNVKYFEGVARIPRTVLDAHRE GLLLGTACSEGEVFDAVLSSGVDAAVKVAKYYDFIEVMPPALYAPLLAQGTIKDEEGIRQ VIRDLLEVGRRLNKPVLATGNVHYIEPEDEIYREIIVRSLGQGAPINRPIGRGENAQPAP LPKAHFRTTNEMLDEFAFLGEDVAYEIVVKNTNDFADRFEEVEVVKKDLYTPFLEKSEER VAEMTYQKAFEIYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQMLVIRSNDRGYLVGS RGSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSVGSGYDLPDKDCPECGTRYK KDGHDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT AYGFVKGYERDYGKFYPEAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYP ADDLSAEWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIPADDPDVMAL FSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGMWLKISDEERNG YIEAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHYPIYYYCAYFSIRA KAFDIKTMSAGLDAVKERMADISNKRKNNEASNVEIDLYTTLEIVNEMLERGYKFGQLDL YRSDATEFIIDGDTLIPPFVAMDGLGENVAKQIVKAREEGEFLSKMELRKRGGVSATLVE KMDEMGILGNMPEDNQLSLFDDFF >gi|304427355|gb|AEEM01000003.1| GENE 129 140801 - 141253 327 150 aa, chain + ## HITS:1 COG:SPy1960 KEGG:ns NR:ns ## COG: SPy1960 COG1846 # Protein_GI_number: 15675758 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 5 139 6 140 142 151 60.0 3e-37 MANFKNNAVKSMVVMRKAFRTIDARVSESFKVDHLTPTQFGVLDVLYAKGPMKIAELLDS MLATSGNMTVVIRNMEKKGWVTRTTCPHDKRAYLVGLTEQGRQVIEHALPLHIAKVEETF SVLTEDEQAELIRLLKKFKPCEQNNLQNQK >gi|304427355|gb|AEEM01000003.1| GENE 130 141359 - 141904 772 181 aa, chain + ## HITS:1 COG:SP1546 KEGG:ns NR:ns ## COG: SP1546 COG0431 # Protein_GI_number: 15901389 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 2 180 30 208 209 224 65.0 7e-59 MKKILFVVGSLRSGSFNAQFAKNAEKVLEGKAEVSYLDWAQVPVFSQDLEANIPAAVQAA RQAVSEADAIWIFSPVYNFAIPGSVKNLLDWLSRAIDLSDPTGPSAINEKVTTVSILANG GHEQAAESYRALLPFIRTQFVDEITTTRVNDSAWADGVFVPTEEVLANLDKQAQALLSAI D >gi|304427355|gb|AEEM01000003.1| GENE 131 142030 - 142263 186 77 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0212 NR:ns ## KEGG: GALLO_0212 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 77 1 77 77 90 100.0 1e-17 MVKLERHNQMLLLSFALTAMSWLSLSLISLLNHVGNHGIISNVVTIISAITGIAGFVSGI VAIVLFLIGQKANTTLY >gi|304427355|gb|AEEM01000003.1| GENE 132 142535 - 143149 1033 204 aa, chain - ## HITS:1 COG:SPy1958 KEGG:ns NR:ns ## COG: SPy1958 COG0242 # Protein_GI_number: 15675756 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pyogenes M1 GAS # 1 204 1 204 204 331 78.0 5e-91 MSVIEKLAKPSHLINMDDIIREGNPTLRAVAEEVTFPLSDEEIILGEKMLQFLKNSQDPV TAEKMGLRGGVGLAAPQLDISKRIIAVLVPNPEDKDGNPPKEAYSLQEVMYNPKVVAHSV QDAALADGEGCLSVDRVVEGYVVRHSRVTVDYFDKNGEKHRIKLKGYNSIVVQHEIDHTN GIMFYDRIDEKNPFAIKEGMLIIE >gi|304427355|gb|AEEM01000003.1| GENE 133 143217 - 143861 678 214 aa, chain - ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 7 212 1 206 219 90 29.0 2e-18 MSLEAYIKEYQLEKIFPTHYFDKLQVLQLSAGDAICHQGESLTALSYFAKGKLKIVRRLF NGKEHILDIKEKPTLIGDIELLTDQPVVSSVIALEDTLIIQLPLAGIREQLLADNALLLN LSKGLAQSLYEQNIRASTNLNYTLKERLATHILAIEEKGVFKLELTSLADSFSVSYRHLL RVIHELIDTGIIEKRRPYYYIKDMTQLIDLKITN >gi|304427355|gb|AEEM01000003.1| GENE 134 143955 - 145115 889 386 aa, chain + ## HITS:1 COG:SP1600 KEGG:ns NR:ns ## COG: SP1600 COG0477 # Protein_GI_number: 15901440 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 378 1 377 383 217 39.0 3e-56 MKALLEKLSLLSLSLMLVSTFSTSTALPQMISTFQQRGYAASQVEMLFSISSFAIMGMLV INPFLDRFLSERSSIILGLSFIAFGGSLPVVGKTYALVVVSRVLLGMGIGLINARAISII SENYQGNERAQMLGFRGSFEVLGNAFLTALVGFLVPFGWSWAFIVYLFALPILLFYLLFA PKRAVVAEVASQKTSAKFTKKDIVYIVGLSLLAGFVININSANSLRIPVIVDQLHLGSPR QASLILSGMMLMGILSGICFEGLLARFKKQLIIVSLIPFALGLFMLGVAHNLWLMLIGAM LSGFWYSIVVTSVFSNVSNKISPQLIGHATTLVLLFCNFGGASAAIVLNLFSKINPQPGF AFVIYAIISLIISLVLMFKTRFLSQK >gi|304427355|gb|AEEM01000003.1| GENE 135 145128 - 145982 631 284 aa, chain + ## HITS:1 COG:lin2846 KEGG:ns NR:ns ## COG: lin2846 COG1737 # Protein_GI_number: 16801906 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 278 1 278 283 266 48.0 4e-71 MKMIQRLQLLEHLTPTEQILVDYLKENPEEFIALKPREVSDKLFISVSTIYRLINKLGLR GVNDLKLLLRTDLQQGQNHQVSDIDFPILETDTHYEVMLRLKEVYERTIEDTLGLADPET LVSAVEKMSKANIIDIYTSSANLYFAENFQFQMQEINQLVTVPKDDYIKSLTATNSDSSH LAFVISFGGRGSSMEAFCKILKKNQVPIILLTSTQGNPLTAYADDIIYMASSENHYNKMS SFSTRMTLLYLLDSLYSLYFQLNYDQNLAFKLEAYERMTKTKKE >gi|304427355|gb|AEEM01000003.1| GENE 136 146102 - 146485 540 127 aa, chain - ## HITS:1 COG:lin0429 KEGG:ns NR:ns ## COG: lin0429 COG0346 # Protein_GI_number: 16799506 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Listeria innocua # 2 126 1 125 126 142 56.0 1e-34 MIKIEHIGVWVRDLETMKEFFAKYFQTTASERYHNPRTGFSSYFLSFPDNAARLELCHRE DIAEGVDESLGFAHLAISLGSKEAVDQLTAQLENDGYHVLGQPRTTGDGYYESVVCDPEE NRLELTV >gi|304427355|gb|AEEM01000003.1| GENE 137 146503 - 147348 1013 281 aa, chain - ## HITS:1 COG:CAP0070 KEGG:ns NR:ns ## COG: CAP0070 COG0561 # Protein_GI_number: 15004774 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 5 278 6 277 283 354 67.0 1e-97 MTKSLIIMDIDGTLTNSEKKITPKTKEALLAAQEQGARLILASGRPVSGMQDFAKELAMD KHHGLLVAYNGAVVVDCESGDILFNQAMTVEEGQAVLEHVKQFDVIPMISKGDYMYVNDV YNNMIHWEKKNLDINIIEYESRGGKYLLAEKRDLAAFADFPLNKILLAGSSDYLAIHHKE IAAPFEGKLSSMFTADFYYEFTAQGIDKAKALDTVLAPLGYQPEDMIAFGDGQNDASMLT YSGTAVAMANAVQELKDIADIITLSNDEDGIAETLRDYFNI >gi|304427355|gb|AEEM01000003.1| GENE 138 147662 - 147931 456 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228476469|ref|ZP_04061159.1| ribosomal protein S15 [Streptococcus salivarius SK126] # 1 89 1 89 89 180 98 4e-44 MAISKEKKNEIIAQYARHEGDTGSVEVQVAVLTWEINHLNEHIKQHKKDHATYRGLMKKI GHRRNLLAYLRRTDVNRYRELIASLGLRR >gi|304427355|gb|AEEM01000003.1| GENE 139 148416 - 151097 3845 893 aa, chain + ## HITS:1 COG:L13145_1 KEGG:ns NR:ns ## COG: L13145_1 COG1012 # Protein_GI_number: 15674137 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Lactococcus lactis # 14 467 14 477 477 662 73.0 0 MAKATNADVKNNELSAEEAAQQYTGALVDKALEAERVYATYSQEQVDKIVAAMALAGSEA SLELAKEAHAETGRGVVEDKDTKNHFATEYVYERIKNEKTVGIIGEDKVSGSIQIAAPLG VLAGIVPTTNPTSTTMFKILVALKTRNAIVFAFHPQAQKCSAHAAKILYDAAVKAGAPEN IVQWIETPSIANTTALIQNKKIASILATGGPGMVNAALKSGNPSMGVGAGNGAIYVDATA HIDRAVEDLLLSKRFDNGMICATENSAVVEAPVYKEWLQKMQDKGAYLVPKKDYKKIEDF VFNDNHGVNGPVAGMPATWICEQAGVKLPEGKDVLLFELDKKNIGEKLSSEKLSPLLSVY KAKDREEGIEIVEALLDYQGAGHNAGIQIGSQADPFVATYGDAVKASRVLVNQPDSVGGI GDVYTDALKASLTLGTGSWGKNSLSHNLSTGDLLNIKTVAKRRNRPQWIRLPEKTYYEKN AISYLQDEYEPMQRALIVADPGMVQFGFVDTVLAQLALRDEKVATSIYGTIKPDPTLGQT IEIAKQMRDFKPDTVIAIGGGSAIDASKIARLIYEVYLDRGDEFLDSYDAVSEFFLELQQ KFIDIRKRIVKFKHQTTTRLFCIPTTSGTGAEVTPFAVITDDYTHVKYPLADYELVPQVA IVDPEFVMTVPKRTAAWSGLDALSHALESYVSVMASDFTRPWSLEAIKLIIENLEDAYNY DPKNPTLRGEKAKENMHYAAAIAGMAFGNAFLGINHSLAHKTGGEFGLPHGLAISIAMQH VIRYNGVSGNVKRSVYPRYEEYRAQKDYADIARYIGLKGKDDAELVEALCDRIDKLMHAV DVEPKLSANGVTKEAFDAAVDRLASLAYDDQCTPANPRQPYISELKQLLIDMF >gi|304427355|gb|AEEM01000003.1| GENE 140 151323 - 151523 150 66 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0221 NR:ns ## KEGG: GALLO_0221 # Name: not_defined # Def: predicted membrane protein # Organism: S.gallolyticus # Pathway: not_defined # 1 66 52 117 117 90 100.0 2e-17 MAEQTIVFLILMILGSFGMGFTCPNRFSKRSRIALFVVAILVLAFYLIVLWIISGALSNI SSGTTI >gi|304427355|gb|AEEM01000003.1| GENE 141 151536 - 151769 370 77 aa, chain + ## HITS:1 COG:SPy1768 KEGG:ns NR:ns ## COG: SPy1768 COG2261 # Protein_GI_number: 15675612 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 77 1 77 79 78 68.0 4e-15 MIWSLIVGALIGMMAGAITNRGESMGCIYNIFAGLVGSFVGQSLFGFWGPSLAGMAILPS ILGAIIVIAVVDLFFGK >gi|304427355|gb|AEEM01000003.1| GENE 142 151973 - 154156 203 727 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478187|ref|ZP_04062795.1| 30S ribosomal protein S1 homolog [Streptococcus salivarius SK126] # 494 724 138 379 400 82 28 9e-15 MSKQTFETTFAGRPLVVEIGQVAKQANGAAVVRYGESTILSAAVMSKKMSTGDFFPLQVN YEEKMYAAGKFPGGFNKREGRPTTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE DASAPMAAMFGSSLALSISDIPFNGPIAGVQVAYIDGEFIINPSAAQKEASLLELTVAGT KDAINMVESGAKELSEDIMLEALLKGHEAVRELIAFQEEIVAAVGKEKAEVELLQVDPEL QAEIIAAYNADLQKAVQVEEKKAREAATEAVKEQVIAVYEERYADDENYETIMRDVAEIL EQMEHAEVRRLITEDKIRPDGRRVDEIRPLDAEIDYLPKVHGSGLFTRGQTQALSVLTLA PMGETQIVDGLDPEYKKRFLHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTI LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILKEALAQAKKARFEILDLI EATIPAPRAQLAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIEETGVKIDIDDEGNVSI YSSDQAAIDRTKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEISWS RTANVSDVLEVGEEVDVKVIKVDDKGRVDASMKALLPRPPRAEKEHKGHSPFGGHLRDRK EKHDKID >gi|304427355|gb|AEEM01000003.1| GENE 143 154200 - 154955 930 251 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0224 NR:ns ## KEGG: GALLO_0224 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 251 1 251 251 486 99.0 1e-136 MTNTNELDIRLRAFINAPDNFLDSVALVNALHNNPVLASDQPYALEIDGQKVTPVFSDKD DLETFKTEQDSALQQNWVERSTLDVLREVIEKGLTGLVFNLKKTGDFGNSTIFKSSELIQ FLNAYTTILNKLMGEENLAADVLDKYYLVPAFVHPRDDKSFDRMFPTMSTPEGKSYVPAF SNLQSFAKWYNHNDFGLPFRKAQGSVLTWRLADIYQPGHGENDIDETVGVAINPFDDQQI LVDWSDIDEDE >gi|304427355|gb|AEEM01000003.1| GENE 144 154971 - 155588 921 205 aa, chain + ## HITS:1 COG:SP0589 KEGG:ns NR:ns ## COG: SP0589 COG1045 # Protein_GI_number: 15900498 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 205 1 205 205 318 81.0 5e-87 MGWWKETIDIVKKNDPAARSSLEIILTYPGIKALAAHRLSHFLWKHGFKLIARMHSQFWR FWTQIEIHPGAEIAEGVFIDHGSGLVIGETAIVEKGVMLYHGVTLGGTGKDVGKRHPTVR EGALVSAHAQVIGPIEIGKNAKVGAAAVVVADVPADVTVVGVPAKVVRVHGKKDVDAIHN MEENREYYTSKLEEARYQSLHSSKL >gi|304427355|gb|AEEM01000003.1| GENE 145 155647 - 156993 1492 448 aa, chain + ## HITS:1 COG:SPy1941 KEGG:ns NR:ns ## COG: SPy1941 COG0215 # Protein_GI_number: 15675744 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 3 448 2 447 447 750 82.0 0 MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY KVNYISNFTDVDDKIIKGAAEAGMDTKAFSDKFIAAFMEDVKQLGVKPATKNPRVIDYMD EIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVDGEGEIKEN PLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGADLEFPHHTN EIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKNVDGQVLRFFLATQQ YRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKADFEAAMDDDFNTANGI TVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDADIEALIEKRQAARANKDFA TADAIRDQLAAQGIKLLDTKDGVRWTRD >gi|304427355|gb|AEEM01000003.1| GENE 146 156986 - 157390 331 134 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 10 134 13 137 141 132 52 1e-29 MTNKVDVNLINGIALAFEGDAVYSMYIRKHLIFQGLTKPNQLHRKATKYVSAKAQAMLIN LMLEAQLLTEKEEDIYKRGRNTNSHTKAKNADVVTYRMSTGFEAVMGYLHMTGQIERLEE LIDWCIQAVEKIED >gi|304427355|gb|AEEM01000003.1| GENE 147 157453 - 158202 562 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 11 247 7 246 255 221 47 2e-56 MKNREFNETNDIVYGVHAVTESLTANTGNKLYIQDDLRGKNVDKIKNLAAEKKVSISWTP KKTLSDMTNGAVHQGFVLRVSEFAYAELDTILDKAAQEENPLILILDGLNDPHNFGSILR TADATNVTGVIIPKHRAVGVTPVVAKTSTGAVEHVPIARVTNLSQTLDKLKEQGFWVFGT DMNGTPSHKWNTSGKLALIIGNEGKGISQNIKKQVDEMITIPMNGHVQSLNASVAAAVLM YEVFRHKID >gi|304427355|gb|AEEM01000003.1| GENE 148 158236 - 158766 619 176 aa, chain + ## HITS:1 COG:SPy1937 KEGG:ns NR:ns ## COG: SPy1937 COG3688 # Protein_GI_number: 15675740 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Streptococcus pyogenes M1 GAS # 7 176 1 170 172 256 78.0 1e-68 MKGLEQLKKKILLVDGYNMIAFWQETRQLFKKNQLDEARNILLRKLNNYAHFENLDIICV FDAQYVPGVRQRYDQYKIQVIFTEEDETADSYIERTAAELNTPRNLVEVATSDLNEQWTV FSQGALRVSARELEQRVNTVKSDLDKMSQHIDLTTPKLRPWNDGQLDKLKQLLDDM >gi|304427355|gb|AEEM01000003.1| GENE 149 158929 - 159789 973 286 aa, chain + ## HITS:1 COG:SPy1936 KEGG:ns NR:ns ## COG: SPy1936 COG1307 # Protein_GI_number: 15675739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 286 286 377 64.0 1e-104 MTFKLITDSTADLDEEWANAHDVEILGLTIQLDGKTYETVGENRLTSEVLLESMKNGGKP TTSQVNVGQFEESFRHHAQNGDKVLYLAFSSVLSGTYQSSMIARDIVLEEFPQATIEIVD TLAAAGGEGYLSILAAQARDEGKSLEETKAMIIDILPRLRTYFLVDDLYHLMRGGRLSKT SAIMGSLANIKPLLWIEPSGKLVPLAKVRGRKKALKEVVSQATQSLAHDTAVVAYANDIE GAETLKKSLLEHEDVDHVLIMPLGPVISAHVGPGTLAVFSIGKEAR >gi|304427355|gb|AEEM01000003.1| GENE 150 159967 - 160593 500 208 aa, chain + ## HITS:1 COG:SA2495 KEGG:ns NR:ns ## COG: SA2495 COG1396 # Protein_GI_number: 15928290 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 3 96 7 104 189 63 33.0 2e-10 MNINELRKKNNLSQDEFANLFHVSRQTVSSWENGKSYPDVEMLIKISQHFGISVDDLVKN EMHLPTSNKPKTKSRLWLIALPIFVLICVIAVGIWNKHNSQSVNFSMKDDKTYRSNDTAQ TSLTVAKGYFTVPKAGKLEVKVNATTDNGNLHLTIVDNNNHHYYQIDGDDLKDSQKLYFK SGDYCIRITADAYTEKVVSLDYNIKVNS >gi|304427355|gb|AEEM01000003.1| GENE 151 160728 - 161684 972 318 aa, chain + ## HITS:1 COG:STM2573 KEGG:ns NR:ns ## COG: STM2573 COG1893 # Protein_GI_number: 16765893 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Salmonella typhimurium LT2 # 6 312 4 303 305 166 32.0 5e-41 MALTYAVLGSGAMGLRFGLLLKEHLGAQVDFIDTWKEQIDTIRKQGGVYQSRDGKNRHLI PISIQTPEEYQGKPDVFIIFDKQMHLSQLLERSKHFFHKNQYVFTGMNGMGHIEKINRYF APEKVLAGTCLIGTVLKDAGNVDFIGKAGAGSINIAAQSGTVDDVQKQIITEFETSNLNP NLTDNFLGTLYTKVVFNSIINTICTLFEIRMGQFIDYEGAEKLGRQLIDEAYNVAELAGI TPLNSRDEEWETIRYVSAETSPLHYPSMYQDMNKGRQTEVDYINGYIYDLGRTYDYQAKT HDFLRHLVHLAENTRKFR >gi|304427355|gb|AEEM01000003.1| GENE 152 161788 - 162333 818 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|94542786|gb|ABF32835.1| LSU ribosomal protein L13P [Streptococcus pyogenes MGAS9429] # 1 181 1 183 183 319 89 4e-86 MFTPFVRPRNLSNNSWTGTSTLCKQKRIRIGELMNKTTFMAKPGQVERKWYVVDATDVPL GRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKATDKIYYTHSMYPGGLK QISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQGMKLKVFVGSEHTHAAQQPEVLDIKGL I >gi|304427355|gb|AEEM01000003.1| GENE 153 162356 - 162748 650 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|195978841|ref|YP_002124085.1| 30S ribosomal protein S9 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 130 1 130 130 254 99 1e-66 MAQAQYTGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTEGS YDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKK ARKASQFSKR Prediction of potential genes in microbial genomes Time: Sun May 29 12:15:02 2011 Seq name: gi|304427334|gb|AEEM01000004.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00014, whole genome shotgun sequence Length of sequence - 18269 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 10, operones - 5 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3 - 62 5.9 1 1 Op 1 9/0.000 + CDS 151 - 417 481 ## COG3830 ACT domain-containing protein 2 1 Op 2 1/1.000 + CDS 429 - 1766 1795 ## COG2848 Uncharacterized conserved protein + Prom 1850 - 1909 5.5 3 2 Op 1 2/0.000 + CDS 1990 - 2694 816 ## COG0406 Fructose-2,6-bisphosphatase 4 2 Op 2 1/1.000 + CDS 2678 - 3451 890 ## COG1876 D-alanyl-D-alanine carboxypeptidase 5 2 Op 3 1/1.000 + CDS 3448 - 4029 539 ## COG1705 Muramidase (flagellum-specific) + Term 4034 - 4074 5.1 + Prom 4053 - 4112 8.6 6 3 Op 1 21/0.000 + CDS 4164 - 5198 1001 ## COG1420 Transcriptional regulator of heat shock gene 7 3 Op 2 29/0.000 + CDS 5241 - 5780 785 ## COG0576 Molecular chaperone GrpE (heat shock protein) 8 3 Op 3 . + CDS 5863 - 7692 2794 ## COG0443 Molecular chaperone + Term 7756 - 7792 5.6 + Prom 7717 - 7776 2.4 9 4 Tu 1 . + CDS 7812 - 8426 503 ## GALLO_0244 ThiJ/PfpI family protein + Prom 8448 - 8507 4.5 10 5 Tu 1 . + CDS 8533 - 9675 1485 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 9685 - 9724 6.2 + Prom 9703 - 9762 6.9 11 6 Op 1 3/0.000 + CDS 9794 - 10543 666 ## COG0101 Pseudouridylate synthase 12 6 Op 2 3/0.000 + CDS 10533 - 11300 792 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 13 6 Op 3 2/0.000 + CDS 11287 - 11754 490 ## COG4720 Predicted membrane protein 14 6 Op 4 . + CDS 11783 - 12346 894 ## COG4475 Uncharacterized protein conserved in bacteria + Term 12358 - 12389 2.1 - Term 12342 - 12381 4.3 15 7 Tu 1 . - CDS 12394 - 13236 856 ## COG0668 Small-conductance mechanosensitive channel - Prom 13412 - 13471 8.3 + Prom 13396 - 13455 8.7 16 8 Tu 1 1/1.000 + CDS 13484 - 14767 1973 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 14787 - 14838 7.5 + Prom 14830 - 14889 7.1 17 9 Op 1 5/0.000 + CDS 14958 - 15530 869 ## COG3343 DNA-directed RNA polymerase, delta subunit + Term 15589 - 15633 -0.3 + Prom 15556 - 15615 6.8 18 9 Op 2 1/1.000 + CDS 15803 - 17407 2308 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 17425 - 17464 4.2 + Prom 17445 - 17504 8.3 19 10 Tu 1 . + CDS 17524 - 18268 694 ## COG1073 Hydrolases of the alpha/beta superfamily Predicted protein(s) >gi|304427334|gb|AEEM01000004.1| GENE 1 151 - 417 481 88 aa, chain + ## HITS:1 COG:SP0238 KEGG:ns NR:ns ## COG: SP0238 COG3830 # Protein_GI_number: 15900174 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Streptococcus pneumoniae TIGR4 # 1 88 1 88 88 136 89.0 8e-33 MKAIITVVGKDKTGIVAGVSAKIAELGLNIDDISQTVLDDFFTMMAVVSSDEKQDFTYLR SEFEAYGETLNVKINIQSEAIFDAMYNI >gi|304427334|gb|AEEM01000004.1| GENE 2 429 - 1766 1795 445 aa, chain + ## HITS:1 COG:SP0239 KEGG:ns NR:ns ## COG: SP0239 COG2848 # Protein_GI_number: 15900175 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 445 1 445 445 738 92.0 0 MDIKQVTETIAMIEEQNFDVRTITMGISLLDCIDPDINKAADKIYKKVVEKAGSLVAVGD EIAAELGIPIVNKRVSVTPISIIGAATDATDYLPLAHALDKAANEIGIDFIGGFSALVQK GYQKGDEILINSIPRALAETSKVCSSVNIGSTKSGINMTAVADMGRIIKETAELSDLGAA KLVVFANAVEDNPFMAGAFHGVGEADVVINVGVSGPGVVKRALEKVRGESFDVVAETVKK TAFKITRIGQLVGQMASERLGVKFGIVDLSLAPTPAVGDSVARVLEEMGLETVGTHGTTA ALALLNDQVKKGGIMACNQVGGLSGAFIPVSEDEGMIAAVQNGSLNLEKLEAMTAICSVG LDMIAIPEDTPYETIAAMIADEAAIGVINQKTTAVRIIPKGKEGDMIEFGGLLGTAPVMS VNHNSSADFIKRGGQIPAPVHSFKN >gi|304427334|gb|AEEM01000004.1| GENE 3 1990 - 2694 816 234 aa, chain + ## HITS:1 COG:SPy1766 KEGG:ns NR:ns ## COG: SPy1766 COG0406 # Protein_GI_number: 15675611 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 231 1 234 235 312 67.0 4e-85 MVKTRLYIARHGKTMFNTIGRAQGWSDSPLTVDGERGIQELGLGLKDAGIVFKEAFSSDS GRTLQTMEIILRECQQENIPYTRDKRIREWCFGSLDGGYDGELFNGVLPRVFDKDMTKLT YQEMAAGIYQVDTAGWAEIWEVLSSRILEGFTAIAEKIEALGGGNAIVVSHGMTIGTFLW LIDHATPRSLGLDNGSISVVSFENGKFTIESIGDVSYRLRGRQILEERKNEKKA >gi|304427334|gb|AEEM01000004.1| GENE 4 2678 - 3451 890 257 aa, chain + ## HITS:1 COG:SPy1765 KEGG:ns NR:ns ## COG: SPy1765 COG1876 # Protein_GI_number: 15675610 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pyogenes M1 GAS # 11 254 9 245 247 271 57.0 1e-72 MRKKRSLPTLILGLLVIVIFIVGIFVFVQGDKLSLSGNAQKSSTDSSSLVSSESSTSSTA SATDLPDVSSSDWELVLVNRDNITAEMNPDLTQIDNIYVDSRIADNVRNFLAAAQAIDSS EHLISGYRSVAYQEELFNSYVSQEMAADPSLTQEAAEDLVKTYSQPAGASEHQTGLAIDM STVNSLNESDADVVAQVAAIAPEYGFVLRFPEGKSDSTGVDYEDWHFRYVGVESAKYMTE NNLTLEEYVALLKENNR >gi|304427334|gb|AEEM01000004.1| GENE 5 3448 - 4029 539 193 aa, chain + ## HITS:1 COG:SPy1764 KEGG:ns NR:ns ## COG: SPy1764 COG1705 # Protein_GI_number: 15675609 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 32 192 33 189 189 115 43.0 4e-26 MKSRFSLKQFLTFVFIFFVGILLLCLHHATPSATKKQSVSYTQTEFIEEIVPTIQKVAAS YGVRPSIIIAQAVLESNYGTNLLAVKYHNLFAVQAQDGQTAIELTYKSYFVNEWQTETGR FAVYKSWTAAIYDYFDLLQSGKLSDGAYDILVSNMGYKKTAQSLQDMGFSTDPDYATKLI AIIEKNNLTAYDK >gi|304427334|gb|AEEM01000004.1| GENE 6 4164 - 5198 1001 344 aa, chain + ## HITS:1 COG:SPy1763 KEGG:ns NR:ns ## COG: SPy1763 COG1420 # Protein_GI_number: 15675608 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Streptococcus pyogenes M1 GAS # 1 344 1 344 344 551 82.0 1e-157 MITQRQSDILNLIVELFTQTHEPVGSKTLQATIDSSSATIRNDMAKLEKLGLLEKAHTSS GRMPSAAGFKYFVEHSLSLDSIDERDIYQVIKAFDFEAFKLDDILQKASQVLADMTGYTS VILDVEPARQKLTAFDIVQLSSHDALAVLTLDESKPATIQFAIPKNFMLKDLVTLKEIVD ERLLGRTVMDIHYKLRTEIPQILQKYFTVTDNVLDLFDYIFAELFKELVFVAGKVNSLDY ANLETYRFLDNDQRVAVALRSSMKEDEIATVQVADSQEAALANVTVLTHKFLIPYRGFGL LSLIGPIDMDYRRSVSLVNVIGRVLAMKLGDYYRYLNSNHYEVN >gi|304427334|gb|AEEM01000004.1| GENE 7 5241 - 5780 785 179 aa, chain + ## HITS:1 COG:SPy1761 KEGG:ns NR:ns ## COG: SPy1761 COG0576 # Protein_GI_number: 15675607 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Streptococcus pyogenes M1 GAS # 1 179 14 190 190 188 80.0 6e-48 MSEETKNEELQEEVEATDVVTEEKVEEQPQEDAQNEELQKALERAEDFENKYLRAHAEMQ NIQRRANEERQQLQKYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIRAL NEEGVEEVVVENFDHNLHMAVQTLPADEEHPADSIAQVLQKGYKLHERLLRPAMVVVYS >gi|304427334|gb|AEEM01000004.1| GENE 8 5863 - 7692 2794 609 aa, chain + ## HITS:1 COG:SP0517 KEGG:ns NR:ns ## COG: SP0517 COG0443 # Protein_GI_number: 15900431 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Streptococcus pneumoniae TIGR4 # 1 609 1 607 607 954 94.0 0 MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTN PDTVISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYF NDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKDEKILVFDLGGGTFDVSILE LGDGVFDVLATAGDNKLGGDDFDQKIIDWLVADFKNENGVDLSQDKMALQRLKDAAEKAK KDLSGVTQTQISLPFITAGAAGPLHLEASLTRAKFDDLTRDLVERTKTPVRQALSDAGLS ISEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV LLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAAD NKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKAKDLGTQKEQHIVIQSNSGLTDE EIEKMMKDAEANAEADAKRKEEVDLRNEVDQAIFATEKTIKETEGKGFDTERDAAQSALD ELKAAQEANNLEDMKAKLEALNEKAQALAVKLYEQAAAAQQAQAGAESAQSTDSSNNGDD VVDGEFTEK >gi|304427334|gb|AEEM01000004.1| GENE 9 7812 - 8426 503 204 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0244 NR:ns ## KEGG: GALLO_0244 # Name: not_defined # Def: ThiJ/PfpI family protein # Organism: S.gallolyticus # Pathway: not_defined # 1 204 1 204 204 386 100.0 1e-106 MKKVACVIYPNFSLYEIVDLTSSLVLQYGIKVDYIAANKENILSEDGLICQATKTFDEVE LNEYSCIVLPGMSDFTSALKDELLIQFLKQLKGKSIVIAAISSAPILLAKAGLLEDITFT GGIWQNFFGYFDFLSKENFMPKTIHQDKNIITAIGFAHQEFAKKVLATLGLCDDIEIVEK PSEELIFNMSDEEFAEFKACFEQS >gi|304427334|gb|AEEM01000004.1| GENE 10 8533 - 9675 1485 380 aa, chain + ## HITS:1 COG:SPy1759 KEGG:ns NR:ns ## COG: SPy1759 COG0484 # Protein_GI_number: 15675605 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Streptococcus pyogenes M1 GAS # 1 378 1 376 378 571 86.0 1e-163 MNNTEFYDRLGVSKDASQDEIKKAYRKMSKKYHPDINKEPGAEEKYKEVQEAYETLGDEQ KRAAYDQYGAAGANGGFGGGAGGFGGFDGGAGFGGFEDIFSSFFGGGGGMRNPNAPRQGD DLQYRVNLSFEEAVFGVEKEVAYNRESTCSTCSGTGAKPGTSPVTCSRCHGSGVINVDTQ TPLGMMRRQVTCDVCHGTGKEIKDPCHTCHGTGHEKKTHKVSVKIPAGVETGQQIRLQGQ GEAGFNGGPYGDLFVIINVLPSKQFERNGSTIYYNMNISFVQAALGDTVEVPTVHGDVEM TIPAGTQTGKTFRLKGKGAPKLRGGGQGDQHVTVNIVTPTKLNDAQVEALKNFAAAGGDK VVNPKKKGFFNKMKDAFDGE >gi|304427334|gb|AEEM01000004.1| GENE 11 9794 - 10543 666 249 aa, chain + ## HITS:1 COG:SPy1901 KEGG:ns NR:ns ## COG: SPy1901 COG0101 # Protein_GI_number: 15675714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 248 1 248 249 397 77.0 1e-110 MVRYKATISYDGRLFAGFQRQPSERSVQEELEKTLQKLNSGNPVKVHGAGRTDSGVHAYG QVVHFDLPQARDVEKLRFGLDTQSPEDIDVVKVEQVSDEFHARYNKHSKTYEFLVDAGRP KNPMMRHYATHYPYPLDLTSMQEAIKDLVGTHDFTGFTASGTSVENKVRTITRATVAIDD KTGFFVFTFSGNGFLYKQVRNMVGTLLKIGNGRMPVSQIKTVLESKNRDLAGPTAAGNGL YLKEINYDE >gi|304427334|gb|AEEM01000004.1| GENE 12 10533 - 11300 792 255 aa, chain + ## HITS:1 COG:SP1598 KEGG:ns NR:ns ## COG: SP1598 COG0351 # Protein_GI_number: 15901438 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 255 1 254 257 325 67.0 5e-89 MTNKYILAISGNDIFSGGGLYADLATYTTNHLHGFLAVTCLTALTENGFDVFATDETVFS HQLNSLKDVPFSGIKLGLLPNVKVADLALEFVKSHVGIPIVLDPVLVCKEKHDVEVSALR DELLKFFPYVTIITPNLVEAELLTQTSIKTLDDMKAAAKKLHQLGAKNLVVKGGNRLSKE KAIDVFYDGENVTVFETPVLENNNIGAGCTFASSIASQLVLGKSAKAAVEQSKEFVYQAI RHSDQYGVKQNYEEN >gi|304427334|gb|AEEM01000004.1| GENE 13 11287 - 11754 490 155 aa, chain + ## HITS:1 COG:SPy1899 KEGG:ns NR:ns ## COG: SPy1899 COG4720 # Protein_GI_number: 15675712 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 154 1 155 156 158 58.0 4e-39 MKKTNTRDLTLMAVLTALSVVLAYIHVPTPTGYLTLLDVGIYFTAYYLGSKSGAIVGGLS GFLIDLLLGYPQYMFHSLIAHGAQGFFAGWSGKKRILGLVLASVSMIGWYFVAALLLGYG LGAAWAGILGNVLQNFFGMFVGYLVYLAYLRFEKH >gi|304427334|gb|AEEM01000004.1| GENE 14 11783 - 12346 894 187 aa, chain + ## HITS:1 COG:SPy1898 KEGG:ns NR:ns ## COG: SPy1898 COG4475 # Protein_GI_number: 15675711 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 3 186 1 184 185 259 72.0 2e-69 MNLQELEKQTRAIVIDIVERSAIKKGQIFVLGLSSSEVAGGLIGKNSSAEIGEVIVKTIL EVLKERGIYLAVQGCEHLNRALTIERELAEKKELEIVNVIPNLHAGGSGQVAAFKFMQDP VEVEEIVAHAGLDIGDTFIGMHVKRVQVPLIPVQRELGGAHVTALASRPKLIGGARATYT SDPIRKF >gi|304427334|gb|AEEM01000004.1| GENE 15 12394 - 13236 856 280 aa, chain - ## HITS:1 COG:SPy1897 KEGG:ns NR:ns ## COG: SPy1897 COG0668 # Protein_GI_number: 15675710 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Streptococcus pyogenes M1 GAS # 1 271 1 271 281 343 63.0 1e-94 MNIISKYLEQLQIEQIAVDLISKAVSLILLFLFFLIVKRVADFIFKHAVEKSITLSRQTE ARQKTISKLLHNIMNYTIYFFLLYWVLSILGVPVSSLLAGAGLAGVAIGLGAQGFLTDVV NGFFILLENQFEVGDSVVIGTVEGNISSVGIRTTQIRGFDGTLHFIPNRNITVVSNKSRG DMRVQIDIPIYAHTDLEKISNIIKTINKEQLPSYPEIVGSPTILGPRTNSTAQLVFRVDI FVQNGKQSYIYSNFYRLYQEALLENDIALPTMYANPTLTK >gi|304427334|gb|AEEM01000004.1| GENE 16 13484 - 14767 1973 427 aa, chain + ## HITS:1 COG:SPy1896 KEGG:ns NR:ns ## COG: SPy1896 COG0544 # Protein_GI_number: 15675709 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Streptococcus pyogenes M1 GAS # 1 427 1 427 427 616 83.0 1e-176 MSVSFENKATNRGVITFTIGQDKIQPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQKFGE EALYEDALNAILPAAYEAAVAELSLDVVAQPKIDIQSMEKGQEWTLTAEVVTKPEVKLGD YKDLEVSVEATKEVTDAEVDEKVERERNNLAELIIKEDAAELGDTVVIDFVGSVDGVEFD GGKGDNFSLELGSGQFIPGFEDQLVGAKAGETVEVNVTFPENYQAEDLAGKDAKFVTTVH EVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEAAKEIAYDDAVEGAALELAVANA EIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYEADADKRVKT NLVIEAIAKAEGFEASDEEIEKEINDLASEYNMEVEQVRNLLSADMLKHDIAMKKAVDVV TSTAKVK >gi|304427334|gb|AEEM01000004.1| GENE 17 14958 - 15530 869 190 aa, chain + ## HITS:1 COG:SPy1895 KEGG:ns NR:ns ## COG: SPy1895 COG3343 # Protein_GI_number: 15675708 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, delta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 171 191 196 85.0 2e-50 MELEVFAGQEKSELSMIEVARAILEERGRDHEMYFSDLVNEIQNYLEKSDAEIREALPYF YSALNVDGSFIPLGDNKWGLRSWYAIDEIDEEIITLEEDENGAPKRKPKRVNAFMDGDED AIDYSDDDPEDEDFTPESSDLEYDEENPDDEKSEVESYDSEINEIIPDEDLDEEVDINEE DDEDDDLDEE >gi|304427334|gb|AEEM01000004.1| GENE 18 15803 - 17407 2308 534 aa, chain + ## HITS:1 COG:SPy1894 KEGG:ns NR:ns ## COG: SPy1894 COG0504 # Protein_GI_number: 15675707 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Streptococcus pyogenes M1 GAS # 1 533 1 533 534 1009 91.0 0 MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVY VTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITD ALKEKIKRAATTTDSDVIITEVGGTVGDIESLPFLEALRQMKADVGADNVMYIHTTLLPY LKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEKPAGQNIKNKLAQFCDVAPEAVIESL DVDHIYQIPLNMQAQNMDQIVCDHLKLDVPKADMSEWSAMVDKIMNLKKSTKIALVGKYV ELPDAYLSVVEALKHSGYVNDTAIDLKWVNANDLTADNVEEMLGDADGIIVPGGFGQRGT EGKIEAIRYAREKDVPMLGICLGMQLTCVEFARNVLNLEGANSAELDPDTKYPIIDIMRD QIDIEDMGGTLRLGLYPCKLKPGSRAAQAYNNQEVVQRRHRHRYEFNTKFRDQFEEAGFV FSGVSPDNRLMEVVELPEKKFFVAAQYHPELQSRPNRPEELYTAFVTAAIENSK >gi|304427334|gb|AEEM01000004.1| GENE 19 17524 - 18268 694 248 aa, chain + ## HITS:1 COG:SPy1892 KEGG:ns NR:ns ## COG: SPy1892 COG1073 # Protein_GI_number: 15675706 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 248 1 245 308 365 71.0 1e-101 MRKIRIRKRRVLLGIIALLFVVSVGASFYFFHVAQIREEKSFINNNGRSKDNPLYAYEQS FDQLTKETLWMTNQGLKQDAWYVPAETATNKTVIVVHGFTNDKEDMKPYAWMFHELGYNV LMPDNMSHGDSEGQIIGYGWNDRLNVIKWAELLVEQNSDSEITLFGVSMGAATVMMASGE ESLPDQVVNIIEDCGYSSVWDELKYQAKEMYNLPAFPILYEVSAISKIRAGFSYGQASSV NQLKNNTR Prediction of potential genes in microbial genomes Time: Sun May 29 12:15:18 2011 Seq name: gi|304427303|gb|AEEM01000005.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00015, whole genome shotgun sequence Length of sequence - 33016 bp Number of predicted genes - 29, with homology - 29 Number of transcription units - 13, operones - 7 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 53 - 196 125 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 340 - 369 1.4 + TRNA 249 - 334 59.9 # Leu AAG 0 0 + Prom 259 - 318 80.4 2 2 Tu 1 . + CDS 547 - 1428 1381 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 1442 - 1487 8.2 + TRNA 1539 - 1611 82.3 # Thr CGT 0 0 + Prom 1541 - 1600 78.3 3 3 Op 1 3/0.000 + CDS 1831 - 2019 312 ## PROTEIN SUPPORTED gi|228478059|ref|ZP_04062670.1| ribosomal protein L28 + Term 2023 - 2054 1.1 + Prom 2053 - 2112 8.4 4 3 Op 2 9/0.000 + CDS 2136 - 2501 413 ## COG1302 Uncharacterized protein conserved in bacteria 5 3 Op 3 . + CDS 2501 - 4165 2263 ## COG1461 Predicted kinase related to dihydroxyacetone kinase + Term 4178 - 4214 5.0 + Prom 4224 - 4283 8.1 6 4 Op 1 6/0.000 + CDS 4431 - 6152 2359 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 6168 - 6211 5.6 + Prom 6176 - 6235 9.4 7 4 Op 2 32/0.000 + CDS 6286 - 7989 1904 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 8 4 Op 3 15/0.000 + CDS 7982 - 8464 565 ## COG0440 Acetolactate synthase, small (regulatory) subunit 9 4 Op 4 1/0.500 + CDS 8534 - 9556 1538 ## COG0059 Ketol-acid reductoisomerase + Term 9575 - 9623 7.1 + Prom 9584 - 9643 2.0 10 5 Tu 1 . + CDS 9689 - 10939 1514 ## COG1171 Threonine dehydratase + Term 10947 - 10994 6.4 + Prom 10974 - 11033 7.2 11 6 Tu 1 . + CDS 11154 - 12038 1209 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 12050 - 12098 8.1 - Term 12273 - 12334 16.1 12 7 Tu 1 . - CDS 12342 - 12950 491 ## GALLO_0311 hypothetical protein - Prom 12996 - 13055 9.2 - Term 13068 - 13122 6.1 13 8 Op 1 16/0.000 - CDS 13126 - 13866 287 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 14 8 Op 2 . - CDS 13866 - 15437 1820 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 15462 - 15521 8.2 + Prom 15491 - 15550 5.2 15 9 Op 1 . + CDS 15570 - 17465 1600 ## GALLO_0314 hypothetical protein 16 9 Op 2 1/0.500 + CDS 17517 - 18356 942 ## COG1968 Uncharacterized bacitracin resistance protein + Term 18364 - 18394 1.0 + Prom 18375 - 18434 8.9 17 10 Op 1 2/0.500 + CDS 18457 - 19212 952 ## COG4862 Negative regulator of genetic competence, sporulation and motility 18 10 Op 2 2/0.500 + CDS 19214 - 20377 1268 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase + Term 20380 - 20413 1.1 + Prom 20380 - 20439 5.3 19 11 Op 1 41/0.000 + CDS 20491 - 21261 171 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 20 11 Op 2 24/0.000 + CDS 21335 - 22597 1551 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 21 11 Op 3 19/0.000 + CDS 22599 - 23831 1419 ## COG0520 Selenocysteine lyase 22 11 Op 4 6/0.000 + CDS 23818 - 24255 351 ## COG0822 NifU homolog involved in Fe-S cluster formation 23 11 Op 5 . + CDS 24268 - 25686 1709 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component + Term 25697 - 25731 2.2 - Term 25679 - 25724 12.7 24 12 Tu 1 . - CDS 25735 - 26973 1410 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 27006 - 27065 11.4 + Prom 27044 - 27103 6.5 25 13 Op 1 21/0.000 + CDS 27147 - 28802 1995 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 28823 - 28866 9.4 + Prom 28825 - 28884 2.6 26 13 Op 2 49/0.000 + CDS 28913 - 29827 1216 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 27 13 Op 3 44/0.000 + CDS 29838 - 30869 1311 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 28 13 Op 4 44/0.000 + CDS 30878 - 31927 577 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 29 13 Op 5 . + CDS 31927 - 32856 292 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 32863 - 32892 1.4 Predicted protein(s) >gi|304427303|gb|AEEM01000005.1| GENE 1 53 - 196 125 47 aa, chain + ## HITS:1 COG:SPy1892 KEGG:ns NR:ns ## COG: SPy1892 COG1073 # Protein_GI_number: 15675706 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 47 262 308 308 63 68.0 9e-11 MVYKNYQATQGEKELYIVKGAGHAKSFETDPQAYIEKISTFLKKYEK >gi|304427303|gb|AEEM01000005.1| GENE 2 547 - 1428 1381 293 aa, chain + ## HITS:1 COG:SP0605 KEGG:ns NR:ns ## COG: SP0605 COG0191 # Protein_GI_number: 15900513 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 1 293 1 293 293 493 87.0 1e-139 MAIVSAEKFVKAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPILIQTSMGAAKYMGGY KLCKALIENLVESMGITVPVAIHLDHGHFEDALECIEVGYTSVMFDGSHLPLEENLEKAK EVVAKAHAKGISVEAEVGTIGGEEDGIIGDGELAPIEDAKAMVATGIDFLAAGIGNIHGP YPANWKGLHLDHLEKLTAAVPGFPIVLHGGSGIPDDQIQAAIKLGVAKVNVNTECQLAFA KATRKFVAEYEANEEEYDKKKLFDPRKFLKPGFEAITEAVEERIDVFGSANKA >gi|304427303|gb|AEEM01000005.1| GENE 3 1831 - 2019 312 62 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478059|ref|ZP_04062670.1| ribosomal protein L28 [Streptococcus salivarius SK126] # 1 62 1 62 62 124 98 6e-28 MAKVCYFTGRKTVSGNNRSHAMNKTKRAVKPNLQKVTILVNGKPKKVWASARALKSGKVE RV >gi|304427303|gb|AEEM01000005.1| GENE 4 2136 - 2501 413 121 aa, chain + ## HITS:1 COG:SPy1886 KEGG:ns NR:ns ## COG: SPy1886 COG1302 # Protein_GI_number: 15675703 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 121 1 121 121 176 92.0 1e-44 MTVKINTKDGQIELSDDVIATVVGGSATEIFGVVGMASKSALKDNFQALLRKENYAKGVV VKSTESGISVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADTVNVYVQNIKVVGE D >gi|304427303|gb|AEEM01000005.1| GENE 5 2501 - 4165 2263 554 aa, chain + ## HITS:1 COG:SPy1885 KEGG:ns NR:ns ## COG: SPy1885 COG1461 # Protein_GI_number: 15675702 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Streptococcus pyogenes M1 GAS # 1 554 1 554 554 856 83.0 0 MSNITTSLFQEMVQAASTRLGNQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPA STVGEVGQILSKGLLMGARGNSGVITSQLFRGFGQAIKDKEELTGQDLAHAFQSGVEVAY KAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRAALDGAKRALAKTPEMLPVLKEV GVVDSGGQGLVFIYEGFLAALTGEYIASEDFKATPAVMTEMINAEHHKSVAEHVATEDIK YGYCTEIMVALKQGPTYVKEFNYEEFQGYLSGLGDSLILVNDDEIAKVHVHTEDPGLVLQ EGLKYGALKKVKVDNMRNQHDAVLEKDQAVAISQEEKDFAIVAVCAGDGLADIFKSQGVD YVISGGQTMNPSTEDIVKAIDAVNAKNVIILPNNKNIFMAAQSAAEVSEVPAAVVETRTV PQGFTSLLAFNPAQSLEENVEAMTASLSDVVSGSVTLAVRDTSIDGLEIHKDDNLGMVDG KIVVSNPDMTTTLKETFAKMIDEDSEIITIYVGEEGNQELAEEISEYLESTYEDVEVEIH DGKQPVYPYLMSVE >gi|304427303|gb|AEEM01000005.1| GENE 6 4431 - 6152 2359 573 aa, chain + ## HITS:1 COG:SA1858 KEGG:ns NR:ns ## COG: SA1858 COG0129 # Protein_GI_number: 15927628 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Staphylococcus aureus N315 # 1 560 1 561 562 864 76.0 0 MRSDMIKVGVDKAPARGLLYATGQVKSAKDMQKPFIAICNSYIDIVPGHVHLRELADVAK EAIREMGGIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAETVINAHWFDGVFYIPN CDKITPGMILAALRTNVPAVFCSGGPMKGGVDMTGHQATLSSLFEAVGTYQAGDMSKTEL DYLEQNACPTCGSCAGMFTANSMNSLMEVLGLALPGNGTVLAVSDQRRELVRQAAKHLMD NVKNNLRPRDIITKEAIDDAFALDMAMGGSTNTVLHTLAIAREAGIEYNLKDINEIAKKT PYLSKIAPSSVYTMHDVQEAGGISAIINQLIKKGTIKGDRITVTGKTLKENVAGAEIKNE EIIHPLESPISPVGGLSILYGNIAQDGAVIKVGGVDPSVKTFRGKAICCDSQDEALELID NGTVKKGHVVVIRYEGPQGGPGMPEMLAPTSKIVGRGLGKDVALITDGRFSGATRGIAIG HVSPEAAEGGNIALIEDGDEIYIDLTNRTLDLLVDDAILAERRKHLKPFKSKISSGWLRR YTAFASSANFGGSMMTQEEFEERKAERESQDKE >gi|304427303|gb|AEEM01000005.1| GENE 7 6286 - 7989 1904 567 aa, chain + ## HITS:1 COG:SP0445 KEGG:ns NR:ns ## COG: SP0445 COG0028 # Protein_GI_number: 15900362 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Streptococcus pneumoniae TIGR4 # 1 567 1 566 566 840 71.0 0 MKQIRLKESKNGSELLLETLASLGIDTIFGYPGGAVLPLYDAIYNFDGIRHILARHEQGA LHEAEGYAKSTGKLGVAIVTSGPGATNAITGIADGMSDSVPMLVFTGQVGMSGIGKDAFQ EADIIGITMPITKYNYQIRDVADVPRIVTEAVHIATTGRTGPVVIDLPKDVSETKTSFYH DPTVNLPSYQPTVEPNVLQVKKILTQLKKAKRPLIIAGGGVNYAGASQELIAFAERYNIP VVSTLLSLGAMPIDHPLSLGMGGMHGSYASNMALTQCDFMINFGCRFADRLTGNPKTFAK KAVVAHVDIDPAEIGKVVKTQIPIVGDAKRALEILLEADEVKTRHDDWTESVLANKAKAP FSYDFDETIIKPQHAIAAIGKITNGDAIVVTDVGQHQMWAAQFYPYKNARQLITSGGLGT MGFGIPAAIGAKLANPDKEVIVFVGDGGFQMTNQELALLNGYGVPIKVVLINNHSLGMVR QWQESFYDEHRSESTFDDEPNFQLMAEAYGIAHYKFTNPNTLEEDLKVITENKPMLVEVA ISNREHVYPMVPTGKSNSEMLGVKFNA >gi|304427303|gb|AEEM01000005.1| GENE 8 7982 - 8464 565 160 aa, chain + ## HITS:1 COG:SP0446 KEGG:ns NR:ns ## COG: SP0446 COG0440 # Protein_GI_number: 15900363 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 158 1 158 158 224 81.0 6e-59 MRRMLTAKLQNSTGVLNRFTGVLSRRQVNIESISVGHTMEPNISRITIIIDVESLEEVEQ IIKQLNRLIDVLRVRDITDIPHLEREVILVKLTAPTSKRAEILAVIQPFRASVVDVAPKS ITIQVTGDADKIEALLRVVKPYGIQNLARTGATGFSRDFS >gi|304427303|gb|AEEM01000005.1| GENE 9 8534 - 9556 1538 340 aa, chain + ## HITS:1 COG:SP0447 KEGG:ns NR:ns ## COG: SP0447 COG0059 # Protein_GI_number: 15900364 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Streptococcus pneumoniae TIGR4 # 5 340 1 336 336 578 91.0 1e-165 MAVTMEYEKDVKVAALDGKKIAIIGYGSQGHAHAQNLRDSGHDVIIGVRHGKSFDKAKED GFDTYEVAEATKLADVIMILAPDEIQADLYAKEIAPNLEAGNALGFAHGFNIRFEYIKAP ETVDVFMCAPKGPGHLVRRTYTEGFGVPALYAVYQDATGNAKDIAMDWAKGVGAARVGLL ETTFKEETEEDLFGEQAVLCGGLTALIEAGFEVLTEAGYAPELAYFEVLHEMKLIVDLIY EGGFKKMRQSISNTAEFGDYVSGPRVITKDVKENMKAVLADIQSGKFAEDFVNDYKAGRP KLEAYRKEAADLEIEKVGSELRKAMPFVGQNDDDAFKIYN >gi|304427303|gb|AEEM01000005.1| GENE 10 9689 - 10939 1514 416 aa, chain + ## HITS:1 COG:SP0450 KEGG:ns NR:ns ## COG: SP0450 COG1171 # Protein_GI_number: 15900367 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Streptococcus pneumoniae TIGR4 # 1 416 1 416 416 660 77.0 0 MILAKDVVNAYDVLKGVVERTPLDFDRYLSEKYGATVYLKRENMQKVRSFKIRGAYYAIH ELSDEEKKRGVVCASAGNHAQGVAFTCHEMKIPATIFMPVTTPQQKIGQVKFFGGPYVTI KLVGDTFDASAQAAQEFTKSEGMTFIDPFDDEDVQAGQGTVAYEIYEQAQEEGVVFDQIY VPVGGGGLISGVATYIKDVAPEIEVVGVEASGARSMRAAFDKGHPVKLEEIDKFADGIAV QKVGDKTFETARKYVDKLVGVDEGLISETLIDMYSKQGIIAEPAGAASIAALEVMEDDIK GKTIVCIISGGNNDINRMQEMEERALIYDGVKHYFVVNFPQRPGALREFVNNILGPNDDI TRFEYIKRANKGRGPVLIGITLGDKNDYNALIDRLSAFDPSYINLHGNESLYNLLV >gi|304427303|gb|AEEM01000005.1| GENE 11 11154 - 12038 1209 294 aa, chain + ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 3 294 5 296 296 457 88.0 1e-129 MILIVLAIFLIVILSVVASTLYVVRQQTVVIIERFGKYQTTSGSGMHVRLPFGIDKIAAR IQLRLLQSEIVVETKTKDNVFVTLNVATQYRVNEQNVTDAYYKLMRPEAQIKSYIEDALR SSVPKLTLDELFEKKDEIALEVQHQVAEEMSTYGYLIVKTLITKVEPDAEVKQSMNEINA AQRKRVAAQELANADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLAESIQELKDANV GMTEEQIMSILLTNQYLDTLNTFAAKGNQTLFLPNHPEGIEDIRTQILSSLKAK >gi|304427303|gb|AEEM01000005.1| GENE 12 12342 - 12950 491 202 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0311 NR:ns ## KEGG: GALLO_0311 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 202 1 202 202 293 100.0 3e-78 MATLKRSIINIALTLVSFAFSSWFYEHYLMTYTHYISSYGVSFTLALNTIITLILTYFTF ILMHLVYTKKITSLTIAVSYFIYFMILIYVILLKNIGIQGYSFNPLSFISDFTSGSRFVP IMNLVMFIPLGFLFRPSKENFILAFFGLLTIETAQYVFHLGIFDLGDVTLNLLSIGIGTM LHQTALRKWLSQHITQKIIKFS >gi|304427303|gb|AEEM01000005.1| GENE 13 13126 - 13866 287 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 235 1 230 311 115 30 5e-25 MTQAIIDIKHLKKSYGQNEVLKDISLSVTKGEVISIIGSSGSGKSTFLRSINLLEEPTAG EILFHGQNVLEKDYNLTEYREKLGMVFQSFNLFENLNVLENAIVAQTTVLKRSRDEAEKI AKENLTKVGMTEQYWKAKPKQLSGGQKQRVAIARALSVNPEAMLFDEPTSALDPEMVGEV LKTMQDLAKSGLTMIIVTHEMEFAKEVSDRVIFMDKGVIAEEGTPEQIFEHPQQERTKVF LQRFLK >gi|304427303|gb|AEEM01000005.1| GENE 14 13866 - 15437 1820 523 aa, chain - ## HITS:1 COG:SP0453_1 KEGG:ns NR:ns ## COG: SP0453_1 COG0834 # Protein_GI_number: 15900370 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 327 1 325 325 409 67.0 1e-114 MKKLLLSCFAAVLLLFGGMTSIHADEYLRVGMEAAYAPFNWTQDDDSNGAVPIEGTNQYA NGYDVQIAKKIADSLGKELLVVKTTWTGLIPALTSGKIDMIAAGMSPTDERKKEIAFSDS YYTSYPVIVVSKKGDYANATSLADFSGAKLTSQQGVYLYNLIDQISGATKETAMGDFNQM RQALESGIIDGYVSERPDAISAENANSDFKMISFEEGQGFSTSESDTAIAVGLRKDDTEM LAKVNAVLAGISEDERLELMDKMIEEQPSDNSEEDENSNFFTDMWTIFKNNWNQFLRGAG VTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLNVYIEVFRGTPMIVQ AMVIYYGTAQAFGISIDRTLAAVLIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTH GQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTF TIIAIIYFVLTFTVTRILRFIERRFDADTYTTGANQNQTKEVK >gi|304427303|gb|AEEM01000005.1| GENE 15 15570 - 17465 1600 631 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0314 NR:ns ## KEGG: GALLO_0314 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 2 606 1 605 630 1178 100.0 0 MMKKLTLFLLAIVTFLGLSVQVNADVDYSISHYDGVLEIHDDNSADFIQTITYQFDSSYN GQIVTLGEAGNMPDGFSVNSQPEVSAEVNGTSREVDTRISNLGDGYEVKIYNAGSSGDTV VVTVHWQLSQLLFPYSDVVELNWVPISDWDETLHNVNFTVTTDKSTSNRQLWAHTGYLNS TTVTKTSNGYQISAKNVSGKLELHAYWDHSIFENVSLLSKNRKSAIIKQEAKIARRSQVL QVLLFYVLPAVVIVLIVGALVVFFRAFRLARRYEHFDRKIRSYEAPEDWSPLLVLKYIYD VDLQHLDTKGSSIPQKFNFETAMQATLLDLIDRKVISVDDKELFCHLDMPMMDYEAEVID MAFGGKEKIIIDDLFADYHFDDTLLKKYKKQYKGKTLESKLNKIGNDFNRRYNAKLNSIN KLVEKELTSQNLPAIRQELSEGTKSTISLARRFLLVAMLVVTLSGVYSFMQEHWIFLIYG TLLAIVIFMLLYINRKMHYSTEHGTMTAEGQQRVQAWVSFTNMMRDIDKFDKVDIQGVVV WNRILVYATLFGYAKRVQKYLDFNDINLANESVILTNQELGYMIGMHTHQLGLASHNANM AAHFSVSSGSSGSGGGGGFSGGGGGGGGGAF >gi|304427303|gb|AEEM01000005.1| GENE 16 17517 - 18356 942 279 aa, chain + ## HITS:1 COG:SPy0280 KEGG:ns NR:ns ## COG: SPy0280 COG1968 # Protein_GI_number: 15674457 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Streptococcus pyogenes M1 GAS # 1 279 1 279 279 419 84.0 1e-117 MLFFELLKAIFLGIVEGITEWLPVSSTGHLILVQEFISLNQSKAFLDMFNIVIQLGAILA VIVIYFKRLNPFQPGKTAREVQLTWQLWLKVVIACIPSILIALPLDDWFEAHFNYMVPIA IALIVYGIAFIWIEKRNANVEPQVTELARMPYLTAFWIGCFQVLSIIPGTSRSGATILGA IIVGTSRSVAADFTFFLAIPTMFGYSGLKAVKFFLDGNVLSFSQFLILMVASVTAFLVSL YVIRFLTDYVKKHDFTIFGKYRIVLGSILIVYSILKAIF >gi|304427303|gb|AEEM01000005.1| GENE 17 18457 - 19212 952 251 aa, chain + ## HITS:1 COG:SPy0281 KEGG:ns NR:ns ## COG: SPy0281 COG4862 # Protein_GI_number: 15674458 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms; N Cell motility # Function: Negative regulator of genetic competence, sporulation and motility # Organism: Streptococcus pyogenes M1 GAS # 1 250 1 252 253 326 73.0 2e-89 MEMKQISETTLKITISMEDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGML SFRVTPRKDRIDVFVTKSEINKEINFEDLAAFDDVSNMSPEEFFKTLEQTMLSKGDTEAH EKLGKIEEMMEGAVEEVLTEQAQAEPTEEDINPSDYVHYVLDFPTLEAVVAFAKAIDFPV EASELYKDGGLYHMTILLDLQNHPSYYANLMYARLLEYASAGTKTRAYLQEHGVEMLADD AVAKLKMIELV >gi|304427303|gb|AEEM01000005.1| GENE 18 19214 - 20377 1268 387 aa, chain + ## HITS:1 COG:SPy0282 KEGG:ns NR:ns ## COG: SPy0282 COG0472 # Protein_GI_number: 15674459 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Streptococcus pyogenes M1 GAS # 1 387 1 388 389 518 78.0 1e-147 MAPFTIEYVLVLIGAFLLSLFLTPIVRFIAFRVGAVDNPNARRVNEVPMPSSGGLAIFIS FLISALILMPRVLKEPIWTTSYFDYILPVVIGGLIITTTGFIDDIYELKPKTKMAGIILG AVVVWAFTDFRFDSFKIPFGGPLLEFNSVITFFLTVFWIISITNAMNLIDGLDGLVSGVS IISLVTMALVSYFFLPQTDFYLTLTILLLIACIAGFFPYNYNPAIIYLGDTGALFIGFMI GVLSLQGLKNSTAVAVVTPVIILGVPILDTTVAIIRRKLSGRPATEADKMHLHHRLLAMG FTHRGAVLVVYGIAILFSLIALLLNVSSRLGGVLLMVGVAFALEVFIEGLEIWGVGRTPL FDTLKFIGNSDYRQATMLKWKKRKNNK >gi|304427303|gb|AEEM01000005.1| GENE 19 20491 - 21261 171 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 13 231 32 247 329 70 26 1e-11 MSVLEIKDLHVSIEDKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTQG EILLDGENILELEVDERARLGLFLAMQYPSEIPGITNAEFIRAAMNAGKEDDDKISVMDF ITKLDEKMEFLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDA LKIVSKGVNAMRGDNFGAMIITHYQRLLNYITPDVVHIMMDGRVVLSGDAELAARLEKEG YAKIAEELGLKYEEEV >gi|304427303|gb|AEEM01000005.1| GENE 20 21335 - 22597 1551 420 aa, chain + ## HITS:1 COG:SPy0287 KEGG:ns NR:ns ## COG: SPy0287 COG0719 # Protein_GI_number: 15674461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 420 1 420 420 650 76.0 0 MTKESILNFSQTKAEPLWLQERRLTAFDNIDKLPLPEINRVKFHRWNLGDGTISEDQALA NVPDFTALGDNPKLVQVGTQTVLEQLPTDLINKGVIFTDFYTALEEIPDIIEKYFGAARD FKEDKLAAYHTAYFNSAAVLYVPDNVEIEEPIEGLFYQDKASDVPFNKHILIIAGRNSRI NYLERFETIGEGDAQATANISVEVIALDDSQVKFSAIDRLGENVTTYISRRARHGKDASV DWALGVMNEGNVIADFDSDLYGNGSHANLKVVAASSGRQVQGVDTRVTNYGCNSIGHILQ HGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDENDVTAGHA ASIGQVDPEDMYYLMSRGLDKDTAERLVIRGFLGAVITEIPVKEVRDEMIAVLDRKLENR >gi|304427303|gb|AEEM01000005.1| GENE 21 22599 - 23831 1419 410 aa, chain + ## HITS:1 COG:SP0869 KEGG:ns NR:ns ## COG: SP0869 COG0520 # Protein_GI_number: 15900752 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Streptococcus pneumoniae TIGR4 # 4 410 2 408 408 660 77.0 0 MSALDAHNIYQDFPILDQIVNDEPLVYLDNAATTQKPQQVLDTLNDYYHKTNANVHRGVH TLAERATAAYEASREKARQFINAKSTKEILFTRGTTTGLNWVARFAEEVLQKDDEVLISI MEHHSNVIPWQEACRKTGAKLVYAYLKDGQLDMADLQSKLSPKTKFVSVAHVSNVLGSIQ PVKKIAELAHQVGAYMVVDGAQSAPHMSIDVQNLDCDFFAFSGHKMLGPTGIGVLYGKEE LLNQMSPVEFGGEMIDFVYEQEATWKELPWKFEAGTPNIAGAITLGAAIDYLTNIGMDAV HAHEQELVNYVLPKLQAIDGLTVYGPQDPSQHMGVIAFNLDGLHPHDVATALDYEGVAVR AGHHCAQPLITYLGIHSAVRASFYIYNTKEDCDKLVEAILKTKEFFNGTF >gi|304427303|gb|AEEM01000005.1| GENE 22 23818 - 24255 351 145 aa, chain + ## HITS:1 COG:SPy0289 KEGG:ns NR:ns ## COG: SPy0289 COG0822 # Protein_GI_number: 15674463 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Streptococcus pyogenes M1 GAS # 1 143 1 143 159 217 76.0 6e-57 MALSRLDSLYMAVVSDHSKSPHHHGKLEDVDQVNLNNPTCGDVISLSVKFDGDRISDIAF AGDGCTISTASSSMMTDAVIGKTKEEALELAEIFSKMVQGEKDDAQKRLGEASFLAGVSK FPQRIKCSTLAWNALKKAIENDSKD >gi|304427303|gb|AEEM01000005.1| GENE 23 24268 - 25686 1709 472 aa, chain + ## HITS:1 COG:SPy0290 KEGG:ns NR:ns ## COG: SPy0290 COG0719 # Protein_GI_number: 15674464 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 472 1 472 472 867 91.0 0 MPEKNEKVTPKPIDIGDYQFGFHDDVTPIFSTGKGISEAVVREMSAEKGEPEWMLEFRLK SLEIFNKMPMQDWGPDLSDINFDEINYYQKASDRPARSWDDVPDKIKETFERIGIPEAER AYLAGASAQYESEVVYHNMKDEYDKLGIIFTDTDSALKEYPDLFKKYFAKLVPPTDNKLA ALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATGQFERTLIIVDEGASVHYVEGCTA PNYSSASLHAAIVEIFALEGSYMRYSTIQNWSDNVYNLVTKRATAKKNATVEWIDGNLGA KTTMKYPSVYLDGEGARGTMLSIAFANKGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGK VDYRGQVTFNKESKKSVSHIECDTIIMDDISRSDTIPFNEIHNSQVALEHEAKVSKISEE QLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG >gi|304427303|gb|AEEM01000005.1| GENE 24 25735 - 26973 1410 412 aa, chain - ## HITS:1 COG:SP0872 KEGG:ns NR:ns ## COG: SP0872 COG1686 # Protein_GI_number: 15900755 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 10 412 4 413 413 416 54.0 1e-116 MKKIFAFFAIFLTFLAVGSKVSADDDFDVAAEHAIAVEATTGKVLYEKDATTPDGIASMT KILTVYLVYKAIDEGKLSWDTKVSISDYAYDLTANSDASNVPMEAREYTVEQLVNAAMVA SANSAAIALAEQIGGTESKFVDMMKAQLEEWGITDATIVNASGLNNSYLGDNIYPGSSST DENMMSARDVAIIAQHLITEYPDILKITSQTTADFDGTTMNTYNYMLEGMPYERSGVDGL KTGTTELAGASFVATSTENGMRIISVVMNADGWEDDEYARFEATNDLLEYVKSNYEMVTL VKAGKSYQSSKATVNDGKAKSVAAVASEDLKVVRRINTDVSADFSTNADGYDAPITKGQK IGTITYNDTQIVGTGYLDSEPSVTAVAKTDVDRSIFFKVWWNHFVTFVNEKL >gi|304427303|gb|AEEM01000005.1| GENE 25 27147 - 28802 1995 551 aa, chain + ## HITS:1 COG:L145267 KEGG:ns NR:ns ## COG: L145267 COG4166 # Protein_GI_number: 15672326 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Lactococcus lactis # 6 548 2 543 545 422 49.0 1e-117 MLLKSKTWKRIGLGAVTLVSAAVLAACGGSSSSSSSSSDEINWYTPTEISTLDISKVTDT YSSIAIGNSGSNLLRRDEDGNLQPDLAESVEVSDDGLTYTATLRDNLKWSDGSDLTAEDF VYTWQRIVDPSTASEYAYLVSDAHVLNAEEVIAGTKSVDELGVKADGNKVIFTLSSPSPQ FESLLSFANFMPQSKEFVEEQGDDYGTTSDNALYSGPYTVEDWDGTSGTFTLVKNKYYWD ADNVKTKKVNVQTVKKADTAVQMYKDGELDTASISGTDAIYNANKNRDDVVDVPEATTAY MVYNESGSTEALTNTKIRQALNLATDREGIVKAAIDTGSTAANALVPTGLETLPDGTDLS DYVAADYSYDEDEAAKLFKEGLAELGTDSITLTITADSDNAVAKAAVDYIKQTWENALPG LTIEEKFVTFKQRLQDSKNQNFDIVVSLWGGDYPEGSTFYGLFTSTSSYNYGQISDAAYD AAYQKALTTDALDPAAAAEDYKTAEAELYNNAHYNPLYFRSTKSLQNPSIKGLVRNSTGL QVDFTYAYKED >gi|304427303|gb|AEEM01000005.1| GENE 26 28913 - 29827 1216 304 aa, chain + ## HITS:1 COG:L147009 KEGG:ns NR:ns ## COG: L147009 COG0601 # Protein_GI_number: 15672327 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Lactococcus lactis # 1 303 1 303 303 347 64.0 2e-95 MVKYILKRVAILLVTLWVVVTLSFFLMQVMPGTPYNNPKLTDEMIALMNKQYGLDKPVWQ QYLTYLWNVLHGDFGTSYQSINQPVSRLISQRLGVSIQLGVQALVIGLIAGILVGAASAR NKNNWIDGVLSVISTLGISVPSFIIGLFLLVLLGFKWSLFPLAGWGTFAQTVMPSIALAI PVFAQVTRFFRGQMIETLSSDYIQLATAKGLTKRQVTRKHAYRNSMIPVLTLVGPMAANL LTGSALIEQIFSIPGIGQQFVTSIPAKDYPVIMGTTIVYAMMLMVAILVTDIATSIVDPR VRLQ >gi|304427303|gb|AEEM01000005.1| GENE 27 29838 - 30869 1311 343 aa, chain + ## HITS:1 COG:L147936 KEGG:ns NR:ns ## COG: L147936 COG1173 # Protein_GI_number: 15672328 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Lactococcus lactis # 1 342 1 342 343 402 62.0 1e-112 MAEKNREFKLVGVGSASSQEKIEKPALSFMQDAWRRLKKNKLAVVSMWFLAILIVFSMIS VVLVPRDDANAFNTKEVTTYRNLPPKISDNLPFWNGTITYSGNTEATDVYADQGVPEGTK FILGTDNLGRSIAKRIIVGVRISLLIAIVATLIDLLIGVTYGLISGYVGGKVDMIMQRII EVISSIPNLVIVTMLGLLLGNGVTSIIISIAIVGWTSMARQVRNLTLSYREQEFVLAARS LGESAPKIAFKHILPNISGIIIVQIMMTVPSAIMYEAVLSAINLGVKPPTASLGSLITDA QEYLQYYPYQVILPALALVLISLAFILLGDGLRDAFDPKSGDR >gi|304427303|gb|AEEM01000005.1| GENE 28 30878 - 31927 577 349 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 323 5 329 329 226 38 1e-58 TMTEETILQVKNLRVDFHTYAGEIKAIRDVSFDLKEGETLAIVGESGSGKSVTTKTLMGL SASNAEVTGDIDFKGKKLTELKEDEWIKVRGNEIAMIFQDPMTSLDPTMKIGQQIAEPIM IHEKVSKQEALKRALELMKNVGIPNAEEHINDYPHQWSGGMRQRAVIAIALAANPDILIA DEPTTALDVTIQAQILNLMKQIQKERGSSIVFITHDLGVVAGMADRVAVMYAGKIIEYGT VDEVFYNPQHPYTWGLLNSMPTTDTEAGSLQSIPGTPPDLLNPPKGDAFAPRNEFALDID YEEEPPMFKVSDTHFAATWLLDERAPKVTPPLPIQKRWAKWKELEGRKA >gi|304427303|gb|AEEM01000005.1| GENE 29 31927 - 32856 292 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 253 1 258 563 117 30 1e-25 MTENRKKLVELKNVSLTFNEGKKNEVKAIDNISFDIYEGEVFGLVGESGSGKTTVGRAIL KLYDINKGEIDFDGETISHLKGKELHEFRKNAQMIFQDPQASLNGRMKIRDIVAEGLDIH KLVNSKEERDQKVQDLLALVGLNKDHSTRYPHEFSGGQRQRIGIARALAVEPKFIIADEP ISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD VYNHPIHPYTKSLLTAIPEPDPESERNRIHEEYDPSAELDGQPREMREITPGHFVLCTEA EAEAYKQEL Prediction of potential genes in microbial genomes Time: Sun May 29 12:15:46 2011 Seq name: gi|304427258|gb|AEEM01000006.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00016, whole genome shotgun sequence Length of sequence - 44016 bp Number of predicted genes - 44, with homology - 44 Number of transcription units - 17, operones - 9 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 53 - 91 6.3 1 1 Tu 1 . - CDS 122 - 1744 1582 ## COG2730 Endoglucanase - Prom 1772 - 1831 7.5 - Term 2139 - 2182 7.7 2 2 Tu 1 . - CDS 2193 - 3554 1557 ## COG0527 Aspartokinases - Prom 3577 - 3636 9.5 + Prom 3544 - 3603 4.4 3 3 Tu 1 . + CDS 3648 - 4295 776 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 4309 - 4353 2.1 + Prom 4341 - 4400 10.0 4 4 Tu 1 . + CDS 4506 - 5294 859 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Prom 5324 - 5383 6.7 5 5 Op 1 4/0.333 + CDS 5410 - 5844 386 ## COG1846 Transcriptional regulators 6 5 Op 2 6/0.000 + CDS 5847 - 6821 1191 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 7 5 Op 3 4/0.333 + CDS 6884 - 7108 465 ## COG0236 Acyl carrier protein + Term 7114 - 7161 5.1 + Prom 7168 - 7227 4.7 8 6 Op 1 3/0.333 + CDS 7271 - 8227 1373 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 9 6 Op 2 26/0.000 + CDS 8288 - 9208 1116 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 10 6 Op 3 11/0.000 + CDS 9218 - 9952 231 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 11 6 Op 4 4/0.333 + CDS 10015 - 11247 1678 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 12 6 Op 5 4/0.333 + CDS 11250 - 11735 693 ## COG0511 Biotin carboxyl carrier protein 13 6 Op 6 4/0.333 + CDS 11732 - 12154 556 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 14 6 Op 7 4/0.333 + CDS 12250 - 13620 1838 ## COG0439 Biotin carboxylase 15 6 Op 8 10/0.000 + CDS 13629 - 14495 1083 ## COG0777 Acetyl-CoA carboxylase beta subunit 16 6 Op 9 . + CDS 14492 - 15265 1090 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 15295 - 15349 -0.8 - Term 15352 - 15389 3.0 17 7 Tu 1 . - CDS 15398 - 16675 1774 ## COG0172 Seryl-tRNA synthetase - Prom 16810 - 16869 4.5 18 8 Tu 1 4/0.333 - CDS 16926 - 17297 332 ## COG4687 Uncharacterized protein conserved in bacteria - Term 17321 - 17373 10.1 19 9 Op 1 13/0.000 - CDS 17374 - 18285 1189 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 20 9 Op 2 11/0.000 - CDS 18300 - 19103 1356 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC - Prom 19195 - 19254 3.1 21 9 Op 3 1/0.667 - CDS 19263 - 20255 1548 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 20359 - 20418 8.5 - Term 20537 - 20576 6.3 22 10 Tu 1 . - CDS 20583 - 21395 788 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 21417 - 21476 9.5 + Prom 21276 - 21335 8.4 23 11 Tu 1 . + CDS 21485 - 22069 475 ## GALLO_0352 hypothetical protein + Term 22074 - 22106 2.0 + Prom 22135 - 22194 6.9 24 12 Op 1 . + CDS 22214 - 22813 558 ## GALLO_0353 hypothetical protein 25 12 Op 2 1/0.667 + CDS 22918 - 24339 1936 ## COG2252 Permeases + Term 24350 - 24406 9.1 + Prom 24409 - 24468 4.7 26 13 Op 1 3/0.333 + CDS 24524 - 24967 662 ## COG0802 Predicted ATPase or kinase 27 13 Op 2 3/0.333 + CDS 24915 - 25472 207 ## PROTEIN SUPPORTED gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase 28 13 Op 3 . + CDS 25483 - 26640 1514 ## COG1316 Transcriptional regulator + Term 26648 - 26684 7.5 - Term 26715 - 26750 5.0 29 14 Op 1 . - CDS 26758 - 27060 351 ## GALLO_0358 hypothetical protein 30 14 Op 2 . - CDS 27057 - 27476 446 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 27506 - 27565 11.0 + Prom 27458 - 27517 7.0 31 15 Op 1 7/0.000 + CDS 27540 - 28265 260 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 32 15 Op 2 1/0.667 + CDS 28267 - 29301 719 ## COG4473 Predicted ABC-type exoprotein transport system, permease component 33 15 Op 3 5/0.333 + CDS 29366 - 30160 681 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 34 15 Op 4 . + CDS 30160 - 30798 879 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase + Term 30961 - 31022 4.4 + TRNA 30840 - 30924 61.5 # Ser GGA 0 0 35 16 Op 1 1/0.667 + CDS 31228 - 32166 661 ## COG2199 FOG: GGDEF domain 36 16 Op 2 1/0.667 + CDS 32172 - 33239 664 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 37 16 Op 3 . + CDS 33226 - 35451 1848 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 38 16 Op 4 . + CDS 35448 - 37388 1091 ## GALLO_0367 predicted membrane protein + Term 37401 - 37433 -0.8 + Prom 37395 - 37454 8.9 39 17 Op 1 32/0.000 + CDS 37616 - 38125 574 ## COG0779 Uncharacterized protein conserved in bacteria + Prom 38129 - 38188 3.3 40 17 Op 2 22/0.000 + CDS 38210 - 39400 695 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 41 17 Op 3 8/0.000 + CDS 39420 - 39716 90 ## PROTEIN SUPPORTED gi|148263957|ref|YP_001230663.1| hypothetical protein Gura_1900 42 17 Op 4 10/0.000 + CDS 39709 - 40011 418 ## PROTEIN SUPPORTED gi|228476596|ref|ZP_04061278.1| ribosomal protein HS6-type 43 17 Op 5 32/0.000 + CDS 40031 - 42757 3247 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 44 17 Op 6 . + CDS 43614 - 43964 653 ## COG0858 Ribosome-binding factor A Predicted protein(s) >gi|304427258|gb|AEEM01000006.1| GENE 1 122 - 1744 1582 540 aa, chain - ## HITS:1 COG:CAC3469_2 KEGG:ns NR:ns ## COG: CAC3469_2 COG2730 # Protein_GI_number: 15896708 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Clostridium acetobutylicum # 38 523 3 444 632 201 31.0 4e-51 MYKVTKNLKKITTALILALVALFAIDSNTEVAYAATTGLNSWEITSKMTIGWNLGNSLDA TYWTDNPTPVQSVTAWGNPEPTQQLFDKVKSLGFNTVRIPVTWYQHLTYNNATQTYEINQ DWLDYVKKTVDYAYNNDMFVIINVHHENWVNVDYFNDSNLATAKTKLKDIWQQLSVTFAN YDQRLIFEGMNEPRQTYNSSVEWGNGDSYSWDYINQLNSTFISTVRSNSSGYNSERLLMI PSYHATDNYEALSHLDIPSNSGNIAISVHAYEPYSFTMDSSESHKYQSNNKYGGYNPDTL KSIMNDLKKIQSEKNAPIIIGEFGASDFNNTDERVAWAKDYMTQATSAGFVCVLWDNNAD NDYSSSENFGFINRSTNELYDNAKSVVSTLINYAKKNTSTDTSNTGNTGSTDNTGDNSGS EKDYSWKDLFGANGAACLQAWQSQEIPNALNYINNDYKIVVLYRGQNAPKLVVENAYSYS WDVTVEPSSIEYGENNVAYYNYSDIAAAFSKYGVSIYDMGKVLAFTSAYTEIYGVYAAPV >gi|304427258|gb|AEEM01000006.1| GENE 2 2193 - 3554 1557 453 aa, chain - ## HITS:1 COG:SP0413 KEGG:ns NR:ns ## COG: SP0413 COG0527 # Protein_GI_number: 15900332 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Streptococcus pneumoniae TIGR4 # 1 452 1 452 454 706 75.0 0 MKVIKFGGSSLASAEQLKKVLNIVKSDSERRFVVVSAPGKRNAEDTKVTDALIKYYKTYT AGDDVTAAQEWIINRYQAMAEELGLNSSIVSKIAGAITNLATLPIDGNDFLYDTFLAAGE DNNAKLVAEYFRKNGIAARYVHPKEAGIIVSSEPGNARILPSSYDKLEELRDSEEVLVIP GFFGVTTDGQICTFSRGGSDISGSIVAAGVKADLYENFTDVNGIFAAHPGVVHKPHTIKE LTYREMRELAYAGFSVLHDEALIPAYRGKIPLVIKNTNNPEHPGTRITLKHSGPTIPVIG IAADDNFASINMSKYLMNREVGFGRKVLQILEDLNIRWEHMPTGIDDMSVIVRERELTPI KEQEIISYLTRELGVDEVDIEHNLSIIMIVGEDMKNHIGVTATATKALSDKHINLEMISQ GSSEVSVMFVTQTEQEKQAVRALYNAFFTEEQN >gi|304427258|gb|AEEM01000006.1| GENE 3 3648 - 4295 776 215 aa, chain + ## HITS:1 COG:L150333 KEGG:ns NR:ns ## COG: L150333 COG0637 # Protein_GI_number: 15672725 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Lactococcus lactis # 4 215 3 214 222 211 50.0 6e-55 MENFNAIIFDMDGVLFDTETFYYHRREKFLAEKGISIKHLPPSFFIGGNMKQIWRDILRD DYENWDIHQLQEEYTTYKHNHPLPYKDLIFPDTFEVIKKLYDNGYRLGLASSSTKHDILK ALDDTKMRAYFSVILSGEEFPKGKPHPAIYQEAARQLGTNHDNILVVEDSEKGIQAGVSA DLQVWAIEDKLFGMNQSKANRLVDNLTQIFEELVD >gi|304427258|gb|AEEM01000006.1| GENE 4 4506 - 5294 859 262 aa, chain + ## HITS:1 COG:SPy1758 KEGG:ns NR:ns ## COG: SPy1758 COG1024 # Protein_GI_number: 15675604 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Streptococcus pyogenes M1 GAS # 1 262 1 263 263 340 64.0 1e-93 MSFNNVIYEKGEVATLTLNRPDISNGFNIPTCQEILEVLDNVKSDDSVKILVIKAVGKVF SIGGDLAEMQRAVESDNVESLVEIASLVNKISFAMKKLPKPVIMSVDGAVAGAAANMAVA ADFVVASEKAKFIQAFVGVGLAPDAGGLFLMSRAIGTTRAIQLAMTGEGLNAQKALEYGI VYRLCESEKLERTTNQLTKRLLRGSANSYRAIKEMSWKASFEGWEDYTSLELQLQEELAF KEDFKEGVRAFAEKRRPKFSGK >gi|304427258|gb|AEEM01000006.1| GENE 5 5410 - 5844 386 144 aa, chain + ## HITS:1 COG:SPy1755 KEGG:ns NR:ns ## COG: SPy1755 COG1846 # Protein_GI_number: 15675603 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 144 1 144 144 198 74.0 3e-51 MDYNRINEYLVDIFNRVQVIEETSLRTSQFNDVSLKEMHTIEIIGKNSNVTPSDIARELM LTLGTITTSLNKLEAKGYIERRRSKLDRRVVHLTLTKKGRLLDRLHHKFHKNMVIHIAED MNEEEFEALAQGLKNLHKFLEELM >gi|304427258|gb|AEEM01000006.1| GENE 6 5847 - 6821 1191 324 aa, chain + ## HITS:1 COG:SP0417 KEGG:ns NR:ns ## COG: SP0417 COG0332 # Protein_GI_number: 15900336 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Streptococcus pneumoniae TIGR4 # 1 324 1 324 324 456 71.0 1e-128 MVFARIAQAAAYAPEQVITNDDLSKIMDTSDEWISSRTGIKRRHITRNETTSDLGTQVAK QLISKAGLSAEDIDFIIVATITPDSLMPSTAARIQANVGAVNAFAMDLTAACSGFVFALA TADKFIQSAMYKKGIVIGAETLSKTLDWSERSSSVLFGDGAGGVLIEASETKHFLAESLH TDGSRGLSLTSGKVGLSSPFSEEETDDKFLKMDGRAIFDFAIRDVSKSIKALIEASDVAA EDLDYLFLHQANIRILDKIAKKIGVDVDKLPANMMEYGNTSAASIPILLSEYVDKGYIKL DGSQTVLFSAFGGGLTWGSLIVKI >gi|304427258|gb|AEEM01000006.1| GENE 7 6884 - 7108 465 74 aa, chain + ## HITS:1 COG:SPy1753 KEGG:ns NR:ns ## COG: SPy1753 COG0236 # Protein_GI_number: 15675601 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 74 1 74 74 74 93.0 5e-14 MAVFEKVQEIIVEELGKETDEVKLETTFDELDADSLDVFQVISEIEDEFDIQIETEEGLN TVGDLVAYVEEKTK >gi|304427258|gb|AEEM01000006.1| GENE 8 7271 - 8227 1373 318 aa, chain + ## HITS:1 COG:SPy1751 KEGG:ns NR:ns ## COG: SPy1751 COG2070 # Protein_GI_number: 15675600 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Streptococcus pyogenes M1 GAS # 1 316 1 316 323 459 84.0 1e-129 MKTRITELLNIKYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGGNAPKEVVKANIDKVKE ITDKPFGVNIMLLSPFVDDIVDLVIEEGVKVVTTGAGNPGKYMERFHEAGITVIPVVPSV ALAKRMEKLGADAVIAEGMEAGGHIGKLTTMTLVRQVVDAVNIPVIGAGGVGDGRGAAAI FMLGAEAIQVGTRFAVSKESNAHQNFKDKILKAKDIDTVISASVVGHPVRAVKNKLTTSY AHAEKDFLAGRKTAEDIEVLGAGALRNAVVDGDVVTGSVMAGQIAGLIRKEETCEEILKD LYYGAQEVILEEAKRWSD >gi|304427258|gb|AEEM01000006.1| GENE 9 8288 - 9208 1116 306 aa, chain + ## HITS:1 COG:SP0420 KEGG:ns NR:ns ## COG: SP0420 COG0331 # Protein_GI_number: 15900339 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 306 1 306 306 424 74.0 1e-118 MTKTAFLFAGQGAQKLGMASDLYEKYPIVRETFEQASSILGYDIRELIDNEEDKLNQTRY TQPAILTTSVAIFRLLQEKGYRPDMVAGLSLGEYSALVASGALSFEDAVALVAKRGEFME TAAPAGTGKMVAVMNTEASLIEEICQKASSKGIVTPANYNTPAQIVIGGETEAVNYAVEL LKEAGVKRLIPLKVSGPFHTALLQSASERLAEVLDKVTFSEFQVPLIGNTEAKVMDHADI KALLARQVKEPVRFYDSIETMRELGMTEVIEIGPGKVLSGFLRKIDKAIPASTVEDEASL EALLEK >gi|304427258|gb|AEEM01000006.1| GENE 10 9218 - 9952 231 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 239 1 238 242 93 30 2e-18 MEIKDKNVFVTGSTRGIGLAIARQFASLGANIVLNGRSEISQDLIDSFKDYHVKVIAISG DVSNFDDAKRMVDEAINELGSVDILVNNAGITNDKLMLKMSEADFESVLKVNLTGAFNMT QSVLKPMTRARQGAIINLSSVVGLTGNVGQANYAASKAGLIGFTKSVAREVAARGVRVNA IAPGFIESDMTDAIPEKMQEAILAGIPMKRIGKAEEVASVASFLAQQDYLTGQVIAIDGG MTMQ >gi|304427258|gb|AEEM01000006.1| GENE 11 10015 - 11247 1678 410 aa, chain + ## HITS:1 COG:SP0422 KEGG:ns NR:ns ## COG: SP0422 COG0304 # Protein_GI_number: 15900341 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 409 1 409 411 624 75.0 1e-178 MTLNRVVVTGYGLTSPIGNTPEEFWNNLHDGKIGIGPITKFDNSEIPVHNAGEIHDFPFD KYFVRKDKNRMDQYSLYAIYATLEALENAKLDMDTVDRDRTGVIVSSGIGGLQEMQEQII RMHEKGIKRIQPMFIPKALSNMAAGNIALRIGARGVCKSITTACASSNDAIGEAFREIKF GYHDVILAGGAESTINEIGIGGFNALTALSTTEDPARSAIPFDKDRNGFVMGEGAGVLVL ESLEHAQKRGATILAEVVGYGSNCDAYHQTTPTPDGSGAAKAIKLAIKEAGISPEDVDYV NAHGTSTQANEKGESKAIVTVLGKDVPVSSTKSFTGHLLGAAGAVEAVATIEALRHNYIP MTAGTRELSEDIEANVVYGQGQEAELEYAISNTFGFGGHNAVLAFKRWEA >gi|304427258|gb|AEEM01000006.1| GENE 12 11250 - 11735 693 161 aa, chain + ## HITS:1 COG:SPy1747 KEGG:ns NR:ns ## COG: SPy1747 COG0511 # Protein_GI_number: 15675596 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 161 1 166 166 157 59.0 7e-39 MNISEVKDLMAQFDQSSLREFSFKTGEAELTFSKNEYTSPVVPQQASQAPAAAPVEVAAT APVAPAQAASDSEETVVDTDIFAEGDEVTSPLVGVAYLAPAPDKPAFVSVGDSVKKGQTL LIIEAMKVMNEIPAPNDGIVTEIMVNNEDVVEFGQGLVRIK >gi|304427258|gb|AEEM01000006.1| GENE 13 11732 - 12154 556 140 aa, chain + ## HITS:1 COG:SPy1746 KEGG:ns NR:ns ## COG: SPy1746 COG0764 # Protein_GI_number: 15675595 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Streptococcus pyogenes M1 GAS # 2 139 1 138 139 248 91.0 3e-66 MIDIKQIREALPHRYPMLLVDRVLEVSDDEIVAIKNVTINEPFFNGHFPEYPVMPGVLIM EALAQTAGVLELSKEENKGKLVFYAGMDKVRFKKQVVPGDQLVMTAKFVKRRGTIAVVEA KAEVDGKLAASGTLTFAIGS >gi|304427258|gb|AEEM01000006.1| GENE 14 12250 - 13620 1838 456 aa, chain + ## HITS:1 COG:SPy1745 KEGG:ns NR:ns ## COG: SPy1745 COG0439 # Protein_GI_number: 15675594 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 454 1 454 454 743 84.0 0 MFKKLLIANRGEIAVRIIRAARELGINTVAVYSEADKNSLHTILADEAICIGPARSTDSY LNMNAVLSAAIVTGAQAIHPGFGFLSENSKFATMCEEMHIKFIGPSAEIMDKMGDKINAR AEMIAANVPVIPGSDGEVFTAEEALEVADRLGYPVMLKASAGGGGKGIRKVESAEELVPA FESASQEALAAFGNGAMYIEKVIYPARHIEVQILGDSHDNVVHLGERDCSLQRNNQKVLE ESPSVAIGKTLRAQIGDAAIRAAKAVHYENAGTIEFLLDEKTSEFYFMEMNTRVQVEHPV TEFVTGVDIVKEQIRIAAGQSLSVTQDDITITGHAIECRINAENPKFNFAPSPGKITDLY LPSGGVGLRVDSAVYNGYSIPPYYDSMIAKIIVHGENRFDALMKMQRALYELEIEGVTTN AEFQMDLISDEHVIAGDYDTSFLMETFLPNYNKEND >gi|304427258|gb|AEEM01000006.1| GENE 15 13629 - 14495 1083 288 aa, chain + ## HITS:1 COG:SPy1744 KEGG:ns NR:ns ## COG: SPy1744 COG0777 # Protein_GI_number: 15675593 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 288 288 492 84.0 1e-139 MALFSKKDKYIRITPNNSLNQSAPREVPEVPDELFAKCPACKHMIYQKDLGVAKICPACS YNFRISAKERLAITVDEGSFEELFAGLQTQDPLKFPGYQEKLAKMREKTGLDEAVLTGKA LIKGQKVALAIMDSNFIMASMGTVVGEKITRLFELAIEEKLPVVIFTASGGARMQEGIMS LMQMAKISAAVKRHSEAGLFYLTILTDPTTGGVTASFAMEGDIIIAEPQALVGFAGRRVI ETTVRENLPEDFQKAEFLLEHGFVDAIVKRTEMPDVIAKLVAFHGGAK >gi|304427258|gb|AEEM01000006.1| GENE 16 14492 - 15265 1090 257 aa, chain + ## HITS:1 COG:SPy1743 KEGG:ns NR:ns ## COG: SPy1743 COG0825 # Protein_GI_number: 15675592 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 3 257 2 256 256 422 86.0 1e-118 MSSDVSRILKEARDQGRLTTLEYAELIFDDFMELHGDRHFADDGAVVGGIARLDGRPVTV IGIQKGKNLQENLKRNFGQPNPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEER GQGEAIARNLLEMSDLKVPIIAIIIGEGGSGGALALAVADKVWMLEHSMYAILSPEGFAS ILWKDGSRATEAAELMKITAGELYNMGVVDRVIPEHGYFSSEIVEMIKTNLITELDELSQ LPLEQLLESRYQRFRKY >gi|304427258|gb|AEEM01000006.1| GENE 17 15398 - 16675 1774 425 aa, chain - ## HITS:1 COG:SPy1742 KEGG:ns NR:ns ## COG: SPy1742 COG0172 # Protein_GI_number: 15675591 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 425 1 425 425 730 84.0 0 MLDIKRIRNDFDEVAKKLATRGVAAEKLAELKELDDKRRELLVKSESAKAERNTASAAIA QAKRNKEDASEQIAAMQKLSADIKATDAELAEIDDKLAEFTTTLPNIPAADVPVGADEDE NVEVRRWGTPRDFDFDIKAHWDLGEDLGILDWERGAKVTGSRFLFYKGLGARLERAIYNF MLDEHAKEGYTEVIPPYMVNHDSMFGTGQYPKFKEDTFELADSDYVLIPTAEVPLTNYYR GEILDGKELPVYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPETSYDELEK MVANAENILQKLGLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTEDFQA RRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMGGAE VISPK >gi|304427258|gb|AEEM01000006.1| GENE 18 16926 - 17297 332 123 aa, chain - ## HITS:1 COG:SPy1741 KEGG:ns NR:ns ## COG: SPy1741 COG4687 # Protein_GI_number: 15675590 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 118 1 118 119 167 70.0 6e-42 MAQSINSTVELTTTGVSYLGMGGKVGKFLLGNKGLEFYSDANVEDYIQIPWENIEKIGAN VSRNKVSRHFEVFTDKGKFLFASKDSGKILKVARQHIGNDKVVRMLTLVQTIIKRLSRFV KRK >gi|304427258|gb|AEEM01000006.1| GENE 19 17374 - 18285 1189 303 aa, chain - ## HITS:1 COG:SPy1740 KEGG:ns NR:ns ## COG: SPy1740 COG3716 # Protein_GI_number: 15675589 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pyogenes M1 GAS # 1 303 1 303 303 491 81.0 1e-139 MTEKLQLSKSDRQKVWWRSTFLQGSWNYERMQNLGWAYALIPAIKKLYTSKEDRAAALER HLEFFNTHPYVAAPIIGVTLALEEERANGAEIDDTAIQGVKIGMMGPLAGVGDPVFWFTV RPILGALGASLAMAGNIVGPLLFFFGWNIIRMAFLWYTQELGYRAGSEITKDLSGGIIQK ITKGASILGMFILAVLVERWVSITFTVDLPATQLSEGAYIEFPKGNVTGTELQGILGKVA EGLSLTSTQTNTLQGQLDSLIPGLMGLLLTFFCMWLLKKKVSPITIIIGLFIVGIIARFF GIM >gi|304427258|gb|AEEM01000006.1| GENE 20 18300 - 19103 1356 267 aa, chain - ## HITS:1 COG:SP0283 KEGG:ns NR:ns ## COG: SP0283 COG3715 # Protein_GI_number: 15900217 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 1 267 1 267 267 302 80.0 5e-82 MSVISMILVVVVAFFAGLEGILDEFQFHQPLVACTLIGLVTGNLEAGIILGGSLQMIALG WANIGAAVAPDAALASVAAAIIMVKGGDFTTKGIAVATATAIPLAVAGLFLTMLVRTASV ALVHGADAAAKEGNIAAVERTHLVALFLQGLRIAVPAALLLAVPTSVVQSVLNAMPDWLS GGMAVGGGMVVAVGYAMVINMMATSEVWPFFAIGFAVAAVSDLTLIALGTIGVALAFIYL NLSEKGGNGGGTASGSGDPIGDILEDY >gi|304427258|gb|AEEM01000006.1| GENE 21 19263 - 20255 1548 330 aa, chain - ## HITS:1 COG:SPy1738_1 KEGG:ns NR:ns ## COG: SPy1738_1 COG2893 # Protein_GI_number: 15675587 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 1 169 1 169 169 287 88.0 2e-77 MGIGIIIASHGKFAEGIHQSGSMIFGEQEKVQVVTFMPSEGPDDLYAHFNDAIAQFDADD EILVLADLWSGSPFNQASRVMGENPDRKMAIITGLNLPMLIQAYTERMMDANAGVEQVVA NIIKESKDGVKALPEELNPAEEAAAAPAAQAAPQGAIPEGTVIGDGKLKINLARIDTRLL HGQVATNWTPASKADRIIVASDTVSKDELRKGLIKQAAPNGVKANVVPIKKLIEASKDPR FGNTHALILFETPQEALEAIEGGVPIKELNVGSMAHSTGKTMVNNVLSMDKDDVATFEKL RDLGVTFDVRKVPNDSKKDLFDLIKKANVQ >gi|304427258|gb|AEEM01000006.1| GENE 22 20583 - 21395 788 270 aa, chain - ## HITS:1 COG:SPy1737 KEGG:ns NR:ns ## COG: SPy1737 COG0561 # Protein_GI_number: 15675586 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 270 1 270 270 366 67.0 1e-101 MTKKMIALDLDGTLLRSDNTISDYTVETIKKIQNKGHKVIIATGRPYRMALEHYRRLELS TPMISFNGSLTHLPEKKWEWEHSVTIDKQYLLDVLDMQQSIEADFIASEYRKKFYISAQD HNRVNPQLFGVPEITEKMSMDIKKITENPNGILMQTRHQDKYALADEMRKHFNYEIEIDS WGGPLNILEFSPKGINKAYALKYLLKALNISQDNLIAFGDEHNDTEMLSFAGTGYAMKNA SDILLPFADKQTEFSNEEDGVAKELEKIFL >gi|304427258|gb|AEEM01000006.1| GENE 23 21485 - 22069 475 194 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0352 NR:ns ## KEGG: GALLO_0352 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 194 1 194 194 285 100.0 6e-76 MYKIVWSHLFALGIILGVVYYQSNIDGLMNDVLFSLLTLEMGFLFYYFKHVLLRGLVLIF WCFFYPYNLNVLFSVADTSWDTAALWTSNGMKSFMLYLAVLVFALIAGTLSIRLILNAFK LNHYIQVFFVMGIAFFASLMFQILRTLGITWKVILSQHLNIFEQVSKALTTINMPFILGL MVVQVMMFVLLDND >gi|304427258|gb|AEEM01000006.1| GENE 24 22214 - 22813 558 199 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0353 NR:ns ## KEGG: GALLO_0353 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 199 1 199 199 325 100.0 5e-88 MAKKIVFIHLFFGVIAFGIYHYHLEGPDLVWNMFLALVALDFSLVSYYISKKVVRGLGAI LWLFFYPNTFYMLTDIVHMQFTSTVLWNKTSLILYMLYVSSILFGVLCGIESVKNIVLTF KLKNYYLRLLFIGVLSFISSFAIHIGRYARLNSWDIFTRPKTVISEILDVVSWDAVHFVL GFTFIQILCLVFLDRENFK >gi|304427258|gb|AEEM01000006.1| GENE 25 22918 - 24339 1936 473 aa, chain + ## HITS:1 COG:SP0287 KEGG:ns NR:ns ## COG: SP0287 COG2252 # Protein_GI_number: 15900221 # Func_class: R General function prediction only # Function: Permeases # Organism: Streptococcus pneumoniae TIGR4 # 1 472 19 490 490 626 76.0 1e-179 MEKFFKLKEHGTDVRTEVTAGLTTFFAMSYVLFVNPSILSQTGMPAQGVFLATIIGAVVG TLMMAFYANLPYAQAPGMGLNAFFTYTVVFSLGYTWQEALAMVFICGLISLVITVTKVRK LIIESIPATLKSAISAGIGIFLAYVGIKNAGFLKFSVDAGTYTVSGTGADKGLASITANA SATPGLVAFNTPTVILALIGLAITIFFIVKGIRGGVILSIAVTTIVGIFMGVVDLGSINW SATNLSASINDLKQVFGVALGSQGLGSLFSDASRIPGVLMAILAFSLTDIFDTIGTLVGT GEKVGIVATTGENKESKSLDRALYSDLVGTTLGAIAGTSNVTTYVESAAGIGAGGRTGLT ALVVAVLFAISSFFSPLVSIVPTQATAPILIIVGVMMLSNLKNVKWDDLSEAIPAFFTSI FMGFSYSITYGIAAGFITYTLVKIVKGQAKDVHFVMWILDFLFILNFVCLAIL >gi|304427258|gb|AEEM01000006.1| GENE 26 24524 - 24967 662 147 aa, chain + ## HITS:1 COG:SP1944 KEGG:ns NR:ns ## COG: SP1944 COG0802 # Protein_GI_number: 15901768 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Streptococcus pneumoniae TIGR4 # 3 147 2 146 147 174 64.0 5e-44 MFYSHNEDELIAYGNRLGQELQAGDILVLTGNLGAGKTTLTKGIAKGLDIHQMIKSPTYT IVREYEGRLPLYHLDVYRIGNDPDSIDLDDFLYGDGVTVIEWGELLETDLLGDYLEVVIT PSGDGREITLHANGSRSQTLLEAIERG >gi|304427258|gb|AEEM01000006.1| GENE 27 24915 - 25472 207 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229236145|ref|ZP_04360568.1| acetyltransferase, ribosomal protein N-acetylase [Chitinophaga pinensis DSM 2588] # 19 184 9 178 181 84 28 1e-15 MLTVHGVKRFWRRLNVAEQEVIIEEAQPSDAKALIDLLNQVNAETDFIILEKNLSLDDMQ TFLQTRAEVLNEICLVVRVGSELAGVLNIVSTNSPQTNHIGDIFIALQEKYWGYGLGSLL MEVALDWAEQTPMIRRLELTVQARNSRAVHLYEKFGFKIEATKERGAKTKDGEFLDVYLM SRLID >gi|304427258|gb|AEEM01000006.1| GENE 28 25483 - 26640 1514 385 aa, chain + ## HITS:1 COG:SPy1733 KEGG:ns NR:ns ## COG: SPy1733 COG1316 # Protein_GI_number: 15675582 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 385 1 389 424 489 73.0 1e-138 MKLGKKILLMIAAIFVTTIVALGVYITTAYNFSTSELSKTFKDYKTSDSSSNAIEQTKPI SILLMGVDTGDSERTSTWEGNSDSMILVTVNPETKKTTMTSLERDVLVTLTGPEDNDMNG VEAKLNAAYASGGAQMAIMTVQSLLDITIDYYVQINMQGLVDLVDAVGGITVTNNFDFAI SIAENEPEYTATVEPGTHKINGEQALVYARMRYDDPEGDYGRQKRQREVIQKVLKKILAL DSVSSYKKILSAVSSNMQTNIEISSSTIPSLLGYTDALSDIETYQLQGEDATINGTSYQI VTSDHLLEIQNNIKKQLGLDESTTLQTTAVLYENLYGSGTSSSYDSGYGDYSSSSGYDSG YSDYNSGGYSDYSTDTYSDYSAYSY >gi|304427258|gb|AEEM01000006.1| GENE 29 26758 - 27060 351 100 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0358 NR:ns ## KEGG: GALLO_0358 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 100 1 100 100 173 100.0 2e-42 MKLRHLIALGVAGCAGYAAYHVYKNRDQFKAEIAEADDISERISTDIAKIRRSIDDINNQ LPTLQTISQDLDYKRRLFEQETNSRLEQIKATLAKYQEEN >gi|304427258|gb|AEEM01000006.1| GENE 30 27057 - 27476 446 139 aa, chain - ## HITS:1 COG:SPy1730 KEGG:ns NR:ns ## COG: SPy1730 COG0537 # Protein_GI_number: 15675580 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Streptococcus pyogenes M1 GAS # 1 139 1 139 139 206 71.0 8e-54 MENCIFCKIIAGDIPSSKVYEDDQVLAFLDISQTTKGHTLLIPKEHVRNVLAMSQETSEI LFARLPKVARAVQKATGAVGMNILNNNEEVAGQTVFHAHVHLIPRYDANDEVTFAFTEHE PDFEALGKLAEQISQEVKA >gi|304427258|gb|AEEM01000006.1| GENE 31 27540 - 28265 260 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 215 1 222 245 104 29 8e-22 MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISI DGLTLAQDQAEYRKKIGFIPETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELF RLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPFLGLDPLAISDLTELLAQEKA KGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNDIYMSLTKE V >gi|304427258|gb|AEEM01000006.1| GENE 32 28267 - 29301 719 344 aa, chain + ## HITS:1 COG:SPy1728 KEGG:ns NR:ns ## COG: SPy1728 COG4473 # Protein_GI_number: 15675578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted ABC-type exoprotein transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 344 1 344 344 271 50.0 1e-72 MKEVFQKRRSAFLGQCLKYLRYVFNDHFVLVLVFLTGFLMVQYSQLLRQFPSQTVVIDVI LVLVILVLLSLGKIATYLEAPDKLFYLPKEIEILQWLSQARRRAFVIWTIVQTVILVLLA PIFFKLGFSTVTFGILLLALAVVKWLVMKEKSKVFFSQGKFSWDAAISYEAKRRQGVLKF FSLFTTVKGISASVKRRSYLDGLLGLVKKTHAKTWSNLYLRAFLRSSDYFALTLRLLALS LLALIFISNRLVAVGLALVFNYLLLFQLLTLSQHFDYQYLTNLYPISEKQKAANLKTFLK KLSYLLGFLELLLTFSWQAAGLLVLVTVIITEWYLPYKINKMID >gi|304427258|gb|AEEM01000006.1| GENE 33 29366 - 30160 681 264 aa, chain + ## HITS:1 COG:SPy1727 KEGG:ns NR:ns ## COG: SPy1727 COG0510 # Protein_GI_number: 15675577 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Streptococcus pyogenes M1 GAS # 12 263 12 263 263 439 84.0 1e-123 MTVSDQELTMTPLQGKSGKAFIGQYPNGEKIFIKLNTTPILPALAKEQIAPQLLWVRRTG NGDTMSAQEWLDGRILTKEDMGSKQIVHILLRLHKSRPLVNQLLQLNYKIENPYDLLVDW EKNAPLQIQENTYLQSIVKELKRSLPEFRSEVATIVHGDIKHSNWVITTSGMIYLVDWDS VRLTDRMYDVAFLLSHYIPYSRWHEWLNYYGYKDNEKVRQKIVWYGQFSYLSQILNCFDK RDMEHVNQEIYGLRKFRELVSKKK >gi|304427258|gb|AEEM01000006.1| GENE 34 30160 - 30798 879 212 aa, chain + ## HITS:1 COG:SPy1726 KEGG:ns NR:ns ## COG: SPy1726 COG0220 # Protein_GI_number: 15675576 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 211 1 211 211 382 85.0 1e-106 MRVRKRKGAEEHLENNPHYVILNPEEAKGRWREVFGNDNPIHIEVGSGKGAFITGMALQN PDINYIGIDIQVSVLSYALDKVLDSQAPNVRLLLVDGSDLTNYFADGEIDLMYLNFSDPW PKKRHEKRRLTYKTFLDTYRQILPEQGEIHFKTDNRGLFEYSLASFSQYGMILKQVWLDL HASDFEGNVMTEYEEKFSQKGQVIYRVEAQFQ >gi|304427258|gb|AEEM01000006.1| GENE 35 31228 - 32166 661 312 aa, chain + ## HITS:1 COG:BH3036 KEGG:ns NR:ns ## COG: BH3036 COG2199 # Protein_GI_number: 15615598 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Bacillus halodurans # 125 312 350 549 567 90 29.0 3e-18 MRLVYDDVLIDHDNPIVLAILIGILVLWTLASYLNRRQHMLSHFILQSSKLINVYAVDLD YRFIAVNKNDIRLMEEIFYFTPKIGDFPMNYLASEDAARLKANVDRAKKGETFTFMDTIK TGDKTLYWQNMYSPIYNNRQKVIGVFCFVLDVTEQRLHELEIQRMAYEDVLTRVHNRRYI ELAFEECLTRKEEQITVIISDLDKFKEANDTFGHATGDKILIEFGDILTKIMPESAVIAR LGGDEFAVLLPEVSENQAEFLIKLVQAEMTVKDMGVTASLGAYTDSYQSHKTFVDFCAMA DKKMYENKSQKG >gi|304427258|gb|AEEM01000006.1| GENE 36 32172 - 33239 664 355 aa, chain + ## HITS:1 COG:FN1094 KEGG:ns NR:ns ## COG: FN1094 COG0463 # Protein_GI_number: 19704429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 4 347 2 357 360 250 42.0 3e-66 MIYQDVVIVIPAYEPDERLLELLKNIRDKENHAFDIVLVDDGSGVEFASLFATAQSNYAC HLQRHAENKGKGRALKTAISYILDNFPNAKGIVTIDSDGQHTYEDMMKCLAEFLQHPDSL VLGVRTFEKSVPLRSKFGNLLTRDVLGAMTGMNVSDTQTGLRVIPMSWLPKLLNVEGERY EFEMNMLLEAKEDNISICEVGIATIYLDENQSSHFDVIRDSIRIYKVFFKYIFSSLFSFL VDIVAFTILISLFNGLSFSAVTLASILARAISSVVNFTLNHKVVFKQGQSNSAIKYFTLV VVQIALSSLLVTVLGNALTMLPISVVKILVDGTLFFVSYFVQKHLIFSGGENENQ >gi|304427258|gb|AEEM01000006.1| GENE 37 33226 - 35451 1848 741 aa, chain + ## HITS:1 COG:CAC1561 KEGG:ns NR:ns ## COG: CAC1561 COG1215 # Protein_GI_number: 15894839 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 2 660 7 649 769 486 39.0 1e-137 MKTSKRILYFVAFVTTAFYLTWRLVATIPWHDSWFALIFGILLWGSEVVSAITGYILIWN KQKDFELEKPEIAKERYPDVDVLIATHNEDPELLYKTINACTFMEYPDKSKVHIYVCDDT NRLEVAKLSDELGVGYFGLADNKDAKSGNYNNALRQTSSPLVATFDADMIPYREFLLETV PYFVEQVEAYEIGDDYDKSKVGLIQTPQSFYNADIFQFNLFSESTLPNEQDFFSKEINVF NNSHGAAVYTGSNTVIFRKAIEDVGGFPTDTITEDFELGVRMNAAGYVNYSTKSPMASGL TPTDLKSVIKQRVRWGRGVIRSSYNMNIFFNPKLTKGQRIVYINGYLYWWSFFRRLLYIL APILYTVFHVRVVVSNIWLLFLFWLPSYALTRLSMREVSKQYRTQVWGEIVETIFAPYLF IPMMLESFGISEKKFKVTRKGNDTSWTLYLYALPYLVLWGLAVYGLVTFNYGKFGSELFY GSIISFWLIYHIINLTFAIFCALGRPIYRSSERFTVDEAMVIEVDDDSYQVRVCDISETG ISFYTDLPLYLPKEKELTLNLQSRDYHARVKGHVVRVFAIDSGWRYGVQFSEVPEADKRE FYQYIYDRINHNLPKEKDPWMTTWDDLFENFSQRFQSNERPVSAYDQVAFPKVRVNEEVQ VAGKKRQLRKTDYYYMTFSGKLTNPKKEPNVAFTYKDLPIQLTFVSYDIDRDESLYQVTN LADLDSLPAFKALANEWRGRV >gi|304427258|gb|AEEM01000006.1| GENE 38 35448 - 37388 1091 646 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0367 NR:ns ## KEGG: GALLO_0367 # Name: not_defined # Def: predicted membrane protein # Organism: S.gallolyticus # Pathway: not_defined # 1 646 1 646 646 1108 99.0 0 MISIARLLLFFVITMGYDAFFRNTVKMNRRLTWVFTFSVITLVLYLGSLLGFMLQTVYAI SVLGCLLSLYYLWAVWKKKYRFRRLDYIALGMMAYLLLFGITLWHSPLLHYDNFTHWATI VKFFHINNALPTQQDTIISYYTYPVGSSLFIYFFTTIVGFSEGSMLVGQFFLIASALYAM FAALRDDRRVLMVSMIFASFAVFNTFNVAIRLNNLLVDFLLPALALAAIAGCFAYRNRFW FLSLNTAVILGLLSIVKVSGLFFVALVLVAYVVCIVRLLVRKRAGLKALVLLIMTLLVSF LPFVIWQKHVTDNFPNASSAKHAVSMSELGQVLTGNLSGDPQKIITLFVKSVFTFDSLAS NGILIINLIMLIAFIVIGIRLKHKKFVLLTWGFVNISIVTYYIGILLMYLTAMPTDEALE LAGFERYASSIVIFAFGCLTMALAWVMDKCLYEKIISKRNARSYKSLFNKRLYQYASLVL TVYAIGMFLSENNSIVYNNNQETNEVAKEIHQLTGSQSDSSTDRILVVTADKENVDSYFV QYASRYYLWDVNVDARENFVSADQEFLDLMASYSDSATSYYLWNENIDTRDDFNLTDDDF IALLKTYDEVLILDDHYTFNALTKKLFGRTYSPGLYKVSDILAGKG >gi|304427258|gb|AEEM01000006.1| GENE 39 37616 - 38125 574 169 aa, chain + ## HITS:1 COG:SP0552 KEGG:ns NR:ns ## COG: SP0552 COG0779 # Protein_GI_number: 15900464 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 16 169 6 159 159 202 70.0 2e-52 MILKIKEGILIANANTIINVVTEVVAPAIKEPFELVDVEYEKMGSDYVLSILIDKPEGIT VDDTAELTEIISPLLDAIKPDPFPEQYMLEVSSPGLERPLKTKEALEKAVGSYVNVSLYK AIDKVKVFQGDLVAFDGDTLTIDYLDKTRKKTVEIPYSTVAKARLAVKL >gi|304427258|gb|AEEM01000006.1| GENE 40 38210 - 39400 695 396 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 383 9 389 537 272 39 3e-72 MSKEMLEAFRILEEEKHINKEDIIDAVKESLKSAYKRRYGQSESCVIEFDDKKGDFKVYT VREVVEEVFDSRLEISLSDALKISSAYELGDKIRFEESVAEFGRVAAQSAKQTIMEKMRR QIREVTYNEYKQHEGEIMTGTVERFDQRFIYVNLGSLEAQLSHQDQIPGETFKSHDRIEV YVYKVENNPKGVNVFVSRSHPQFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSH NPNVDAIGTIVGRGGSNIKKVISKFHPKRYDAKAGVEVPIEENIDVIQWVEDPAEFIYNA IAPAEVDMVLFDEEDSKRATVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYEA LEAEREANAAVAQEEVAPVEEAAESVETEVVANDAE >gi|304427258|gb|AEEM01000006.1| GENE 41 39420 - 39716 90 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148263957|ref|YP_001230663.1| hypothetical protein Gura_1900 [Geobacter uraniireducens Rf4] # 8 93 6 91 197 39 30 5e-14 MAKTRKIPLRKSVVSGEVIDKRDLLRIVKNKEGEIFIDPTGKKNGRGAYIKLDNEEAIQA KNKKVFNRSFSMEVPDEFYDELIAYVDHKVKRRELGLE >gi|304427258|gb|AEEM01000006.1| GENE 42 39709 - 40011 418 100 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228476596|ref|ZP_04061278.1| ribosomal protein HS6-type [Streptococcus salivarius SK126] # 1 100 1 100 100 165 79 4e-40 MNNRERLSNLIGLAQRAGKIISGEELVIKAIQSGKAQLIFLANDAGANLTKKTTDKCQYY KVEVSTVFNTLELSAALGKPRKVVAVADAGFSKKMRTLMN >gi|304427258|gb|AEEM01000006.1| GENE 43 40031 - 42757 3247 908 aa, chain + ## HITS:1 COG:SPy1721 KEGG:ns NR:ns ## COG: SPy1721 COG0532 # Protein_GI_number: 15675571 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Streptococcus pyogenes M1 GAS # 1 908 1 952 953 1129 73.0 0 MSKKRLYEIAKELGKSSKEVVEYAQELGLAVKSHSSSVEESDVKRIVAKFSDKPQSTPAK PKVEKASEKTVAQAPKATPATPAKPQSRNFKAEREARAKAEAERRANGGDKKRRNDQRRD DRSNRNDRQGNAQNNRKQNKRDRNSQNHNRRDQRDNRHDNRQQPAKPRVDFKARAAAIKA EQNAEYSRQSENRIHEQENAKRKATAAKEQEQKARVEAKAKAEEKKAVVKKAAPAPQTVV AEHPAPTADKRRKKQVRPEKSHDYNHEHEDGPRKNKNRKNWNNQNQVRNQRNSNWNNNKK NKKGKNNRNNAPKPVTERKFHELPKEFEYTEGMTVAEIAKRIKREPAEIVKKLFMMGVMA TQNQSLDSDTIELLMVDYGIEAHKKVEVDEADIERFFVDEDYLNPENMVERAPVVTIMGH VDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIIENGKKITFLDTPGHAAFTSMRARGA SITDITILIVAADDGVMPQTVEAINHSKAAGVPIIVAINKIDKPGANPERVIGELAEHGI ISTAWGGDCEFVEISAKFGQNIDELLETVLLVAEMEELKADPTVRAIGTVIEARLDKGKG AIATLLVQQGTLHVQDPIVVGNTFGRVRAMVNDLGRRVKVAEPSTPVSITGLNEVPMAGD HFAVYEDEKAARAAGEERAKRALMKQRQVTQRVSLENLFDTLKAGEVKTVNVIIKADVQG SVEALAASLLKIDVEGVKVSVVHSAVGAINESDVTLAEASNAFIIGFNVRPTPQARQQAE TDEVEIRLHSIIYKVIEEVEDAMKGMLDPEYKEKIIGEAIIRETFKVSKVGTIGGFMVTS GKITRDANARVIRDGVVIFDGKLASLKHFKDDVKEIGNGQEGGLMIENYNDIKVDDVIEG YIMEEIKR >gi|304427258|gb|AEEM01000006.1| GENE 44 43614 - 43964 653 116 aa, chain + ## HITS:1 COG:SP0557 KEGG:ns NR:ns ## COG: SP0557 COG0858 # Protein_GI_number: 15900469 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Streptococcus pneumoniae TIGR4 # 1 113 1 114 116 171 86.0 4e-43 MANHRVDRVGMEIKREVNEILQKKVRDPRVQDVTITDVQMLGDLSMAKVYYTIHSELASD NQKAQTGLEKAKGTIKRELGRNLTMYKIPDLTFIKDESIEYGNKIDQMLRDLEAKK Prediction of potential genes in microbial genomes Time: Sun May 29 12:16:12 2011 Seq name: gi|304427232|gb|AEEM01000007.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00017, whole genome shotgun sequence Length of sequence - 22005 bp Number of predicted genes - 27, with homology - 25 Number of transcription units - 13, operones - 7 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 62 - 604 556 ## COG1611 Predicted Rossmann fold nucleotide-binding protein 2 1 Op 2 . + CDS 617 - 1165 532 ## COG3575 Uncharacterized protein conserved in bacteria + Term 1179 - 1230 4.1 + Prom 1211 - 1270 10.0 3 2 Op 1 1/1.000 + CDS 1307 - 1738 458 ## COG3682 Predicted transcriptional regulator 4 2 Op 2 15/0.000 + CDS 1762 - 3999 2516 ## COG2217 Cation transport ATPase 5 2 Op 3 . + CDS 4021 - 4224 320 ## COG2608 Copper chaperone + Prom 4240 - 4299 6.7 6 3 Op 1 1/1.000 + CDS 4327 - 4944 582 ## COG2860 Predicted membrane protein 7 3 Op 2 . + CDS 4947 - 5759 1055 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 5764 - 5807 7.9 - Term 5756 - 5791 3.6 8 4 Op 1 . - CDS 5795 - 5950 116 ## GALLO_0383 hypothetical protein 9 4 Op 2 . - CDS 5893 - 6099 87 ## - Prom 6190 - 6249 7.5 + Prom 6048 - 6107 8.8 10 5 Tu 1 . + CDS 6174 - 7040 429 ## LJ1220 hypothetical protein + Term 7079 - 7120 9.1 - Term 7068 - 7106 8.5 11 6 Tu 1 . - CDS 7114 - 7671 506 ## COG1309 Transcriptional regulator - Prom 7732 - 7791 6.1 + Prom 7688 - 7747 7.3 12 7 Tu 1 . + CDS 7805 - 8650 933 ## COG1307 Uncharacterized protein conserved in bacteria + Term 8655 - 8704 11.4 13 8 Op 1 . - CDS 8675 - 9196 513 ## GALLO_0387 hypothetical protein 14 8 Op 2 . - CDS 9202 - 9783 753 ## GALLO_0388 conserved hypothetical secreted protein - Prom 9884 - 9943 7.2 + Prom 10031 - 10090 7.2 15 9 Tu 1 1/1.000 + CDS 10134 - 11765 1919 ## COG1283 Na+/phosphate symporter + Term 11779 - 11818 5.3 + Prom 11791 - 11850 3.4 16 10 Tu 1 . + CDS 11900 - 13048 1444 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 13052 - 13096 6.7 17 11 Op 1 . + CDS 13478 - 13582 101 ## 18 11 Op 2 19/0.000 + CDS 13669 - 14586 1166 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 19 11 Op 3 3/0.000 + CDS 14586 - 16625 2702 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Prom 16718 - 16777 4.5 20 11 Op 4 . + CDS 16804 - 17061 369 ## COG4224 Uncharacterized protein conserved in bacteria + Term 17070 - 17105 5.1 + Prom 17106 - 17165 8.8 21 12 Op 1 5/0.000 + CDS 17200 - 18681 742 ## COG3711 Transcriptional antiterminator 22 12 Op 2 7/0.000 + CDS 18671 - 19054 423 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 23 12 Op 3 8/0.000 + CDS 19079 - 19528 479 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 24 12 Op 4 7/0.000 + CDS 19560 - 19871 573 ## COG1445 Phosphotransferase system fructose-specific component IIB 25 12 Op 5 1/1.000 + CDS 19907 - 21010 1295 ## COG1299 Phosphotransferase system, fructose-specific IIC component 26 12 Op 6 1/1.000 + CDS 21028 - 21717 742 ## COG0036 Pentose-5-phosphate-3-epimerase + Prom 21739 - 21798 3.2 27 13 Tu 1 . + CDS 21830 - 22004 286 ## COG0176 Transaldolase Predicted protein(s) >gi|304427232|gb|AEEM01000007.1| GENE 1 62 - 604 556 180 aa, chain + ## HITS:1 COG:FN0535 KEGG:ns NR:ns ## COG: FN0535 COG1611 # Protein_GI_number: 19703870 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Fusobacterium nucleatum # 2 179 5 182 192 161 39.0 7e-40 MNITVYLASSMGNTPDYYEQVVAFAHWLAQHDHCLVYGGSKTGLMGVLADTALAQGAKVY GIMPDFMQKREKAHQGLTHLQIVDDMDERKRLLMEEGDILVAFPGGPGTLEEIIQAISWA RVGQLDKPCLLFNMNGYYDSLKEQFNQMVQAGFLTTADRKKVIFVDSLQALEEVISSYQK >gi|304427232|gb|AEEM01000007.1| GENE 2 617 - 1165 532 182 aa, chain + ## HITS:1 COG:SP0260 KEGG:ns NR:ns ## COG: SP0260 COG3575 # Protein_GI_number: 15900194 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 7 177 14 185 190 212 55.0 3e-55 MDLQALFVQDEELMGILRVIAELDLQDSWLAAGTLRNYVWNVLSGKAGLAQASDLDVVFY DVNVSYDETLALQQGLQQRYPAYQWEIKNQVYMHSHSPNTLPYQNARDAVSKYPERCTAI AARLNNDELELFLPYGDDDIVNFVVQPTPHFLEDKKRMQVYRERLAKKDWQEKWPNLQLL DK >gi|304427232|gb|AEEM01000007.1| GENE 3 1307 - 1738 458 143 aa, chain + ## HITS:1 COG:SPy1717 KEGG:ns NR:ns ## COG: SPy1717 COG3682 # Protein_GI_number: 15675568 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 3 138 4 139 144 123 44.0 1e-28 MSISNAEWEIMRVVWTKEETTSSQILEILEQKTDWTASTVKTLLKRLVDKGYLATQKSGK SFLYSALVSEEEAINRQADELFDKFCQRKHTTIIKHLVETTPMTMADINDLQALLLSKKE EALEEVPCNCIPGQCRCKEHLSA >gi|304427232|gb|AEEM01000007.1| GENE 4 1762 - 3999 2516 745 aa, chain + ## HITS:1 COG:SPy1715 KEGG:ns NR:ns ## COG: SPy1715 COG2217 # Protein_GI_number: 15675567 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 12 740 1 729 733 813 58.0 0 MAKEEVFVIDGMTCAACALTVENAVKKLDHVDSAVVNLTTEKMTVDYNSDLVSEKEIEKA VADAGYSASVFDPTTAKSQSERQSEATQNMWHKFLLSALFAIPLLYISMGSMVGLWVPEI ISMSAHPLNFALIQLILTLPVMYFGRRFYVNGFRSLFKGHPNMDSLVALATTAAFVYSLY GVYHIILGHSHHAHMLYFESVAVILTLITLGKYFETLSKGRTSDAIQKLVKLSAKEATVI RDGVEQAVAIEDVRVGDLILVKPGEKIPVDGSVVSGHSAIDESMLTGESIPVEKATEDKV YGASINGQGALTIRAEKVGDETLLAQIIKLVEDAQQTKAPIAKIADKVAGVFVPTVIVIA LVTFIFWYLIMGQTFVFALQVAIAVLVIACPCALGLATPTAIMVGTGRGAENGILYKRGD TLENAHHLDTIVFDKTGTITQGKPQVVDIFAYQGDKDKLLAQVASIEKLSEHPLSQAIVE KASADKLALTEVTQFKSLTGFGLQADIDGQTVYVGNRKLMEKYQVDLTASQEAVLAATQK GQTPIYISANAQLLGLITVADLLKVDSKETVAKLQEKGIDVVMLTGDNSKTAQAIAKQAG IKNVISEVLPDQKSQAIQDLQSQGKMVAMVGDGINDAPALAVADIGIAVGSGTDIAIESA DIILMKPEISDVLKALSISRLTIKIIKENLFWAFIYNILAIPVAMGVLYLLGGPLLNPMI AGLAMGFSSVSVVLNALRLKYIKLN >gi|304427232|gb|AEEM01000007.1| GENE 5 4021 - 4224 320 67 aa, chain + ## HITS:1 COG:SPy1714 KEGG:ns NR:ns ## COG: SPy1714 COG2608 # Protein_GI_number: 15675566 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Streptococcus pyogenes M1 GAS # 1 65 1 65 67 71 63.0 3e-13 MEKTYEVTGMKCQGCVKTVTEKLSAVRGVEKVVVDLDKKQATVTGNPFKLSLKRALKGTK FTLGKEI >gi|304427232|gb|AEEM01000007.1| GENE 6 4327 - 4944 582 205 aa, chain + ## HITS:1 COG:SPy1701 KEGG:ns NR:ns ## COG: SPy1701 COG2860 # Protein_GI_number: 15675558 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 5 203 1 198 201 252 71.0 3e-67 MTIDVWDILSIIGTIAFALSGAIVAMEEDFDILGLFILGFVTAFGGGAIRNLLIGLPISA LWSQGQAFYFALVAMLFIMVFPNLITHKGWRKAEVLTDAIGLAAFSVQGAMYAVKLHQPL SAVIVAAVLTGAGGGIVRDVLAGRKPGVLRSEVYAGWSILAALAIYFKIVHNDSGYYLLV LILTILRMIGYWRQWHLPKIKRKVT >gi|304427232|gb|AEEM01000007.1| GENE 7 4947 - 5759 1055 270 aa, chain + ## HITS:1 COG:SPy1700 KEGG:ns NR:ns ## COG: SPy1700 COG0561 # Protein_GI_number: 15675557 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 269 1 269 274 272 53.0 6e-73 MIKLIAIDLDGTLLNSDKKIPDENVKAIQEAAKAGVKIVLCTGRPKSGLLPYFERLGLTD EEYIIMNNGCSIYNTKNWELVSYAQVNNDELDKLDQVLADYPEVCLTLTGEKHYYAVGSE VPELVQYDAGLVFDTAKAVSIDELKASSEIIFQAMYMARAPYLDPFQEAKESALAAEFSV VRSQEYIFEAMPKGYTKATALKALSEKLGFTPAEVMAIGDAANDIEMLEFADNSVAMGNA TDEVKALCRYETTTNDQAGVAQAIYDYVLK >gi|304427232|gb|AEEM01000007.1| GENE 8 5795 - 5950 116 51 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0383 NR:ns ## KEGG: GALLO_0383 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 51 308 358 358 101 100.0 9e-21 MADASSQWKKNIKLLVKGLKEATPSSKESWKQVAKTFGQAGLSHHKTLFIK >gi|304427232|gb|AEEM01000007.1| GENE 9 5893 - 6099 87 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLQGNYIRKNIFLIKLSVLPILTKTRTKVFNFFACILISLQDTVIWTAFTWQMQVANGKR TLNYWLKV >gi|304427232|gb|AEEM01000007.1| GENE 10 6174 - 7040 429 288 aa, chain + ## HITS:1 COG:no KEGG:LJ1220 NR:ns ## KEGG: LJ1220 # Name: not_defined # Def: hypothetical protein # Organism: L.johnsonii # Pathway: not_defined # 7 280 4 270 273 105 32.0 2e-21 MEREDKIREYLNKKLIGKFKILKHQSLNSHYVGFSKYYDIDVFIKVFPSKQREKFISEKG IVSKDKQRYIDSFEAFSSHFLVLQDYNYKDIQSYQLDYPENLISIAQIIKKFHFQINREN TKISQPEESLTEKIEKRIVEIKDSPYINDVKIVWKKMKFLEQRINDEYVEGKNNTIIHGD FSLRNIKILDDEFQLIDFERSKIDFYFLDFIKFFYIDLNNDEKKIKTFLSEYYKELKLNK ISNELMYFLIFYTSLGIFKYNLHIEDTNFLNYAFIMLEDVNNFFAKQR >gi|304427232|gb|AEEM01000007.1| GENE 11 7114 - 7671 506 185 aa, chain - ## HITS:1 COG:SPy1699 KEGG:ns NR:ns ## COG: SPy1699 COG1309 # Protein_GI_number: 15675556 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 184 1 184 185 213 65.0 2e-55 MTEKTISQKSLQNLQVSNKESQKLTRESLETALLLLLEKKPLNQITISELVAKAGVSRNA FYRNYKSKEAILESILTQIVRRIFRGIKNFDLKTQLSQAWLFILTEAKKEANVLRMIFEQ HLEKLLTSIVSKRLKAYQRFKKKHDSRYTNSFWSNAIISVLSNWVADDMRIPAEEVAAIG LPLFL >gi|304427232|gb|AEEM01000007.1| GENE 12 7805 - 8650 933 281 aa, chain + ## HITS:1 COG:SPy1698 KEGG:ns NR:ns ## COG: SPy1698 COG1307 # Protein_GI_number: 15675555 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 279 1 279 280 397 70.0 1e-110 MTWKIVTDSGCDIKHIEAIADHTEFQNVPLTIQIGSEIFVDDEGLDVDNMMASMYASPTS SKSSCPSPDAFLQAYQGAENVIAITITGNLSGSQNSAQVAKNMLLEEHPNVNIHVIDSLS AGGEIDLIVLELNRLIAKGLSFDEVVEAITAYQAKTKLLFILARVDNLVKNGRLSKLIGK VIGLLNIRMVGKASDEGTLELLHKARGQKKAVQATIDEMFKEGYQGGKVMITHANNERAC QQLSDKIKEKYPQADITFIKASGLCSFYGEDGGILLGYETK >gi|304427232|gb|AEEM01000007.1| GENE 13 8675 - 9196 513 173 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0387 NR:ns ## KEGG: GALLO_0387 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 173 1 171 171 273 97.0 1e-72 MSIGLVFSAIGATCLAISSFAKTKKSMLSWQLSDYFFTMVANFLLGGYTGAFSISVSIIR NTLMIKKWDSIYTTILLIIIQVTLGIHVNNLGLIGCLPLISSVSYTIVSFLTDRVQWLRW VTVENMLLWSLYDFTIKAYPALVMDVVITITTLIAIKKYSGLNRYTHTQNTQD >gi|304427232|gb|AEEM01000007.1| GENE 14 9202 - 9783 753 193 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0388 NR:ns ## KEGG: GALLO_0388 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 193 1 193 193 160 99.0 3e-38 MKTSRSEVTYLILSIILIAFGAGIYLIFGNNYASTSSSQTTTAVSSSSSTSEEDLEANAE ALLAEAQANPTSEAVTNAQAAINKLSDESKKTDLQSQLDAVSAEVTNESNAETAVATAES EQTSANVTAAQAAIDVLTNETVKDQLQARLDAVSNAIAAATTQSNTTSGDSTYSTYDNTY SDSTVTNSDSYGY >gi|304427232|gb|AEEM01000007.1| GENE 15 10134 - 11765 1919 543 aa, chain + ## HITS:1 COG:SPy1695 KEGG:ns NR:ns ## COG: SPy1695 COG1283 # Protein_GI_number: 15675553 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Streptococcus pyogenes M1 GAS # 1 543 1 543 543 755 72.0 0 MSVNWQEIAFNFFGGLGLFLFSIKYMGDGLQQAAGDRLRYYIDKYTSNPFLGILVGLAMS ALIQSSSGVTVITVGLVSAGLLNLRQAIGIVMGANIGTTVTSFLIGFNLGDYALPMIFVG AALLFFTSRRSLNNIGRIIFGVGGIFFALNIMSDAMEPLKSVSAFQDYLATLGDKPIMGV LIGTGLTMLIQSSAAIIGILQGLYAGNLLDLQGAIPILLGSNIGTCITAVLASIGSNIAA KRVAAAHVLFNVIGTVLFMILLLPFTSLMEWMQSSLDLTPAMTVAFAHGTFNITNTILLF PFIGTLAYIVTKLIPGQDEVAKYEAIYLDKILLKQAPAIALGNAKKELIHLGAYATQAFE AAFLFVETSNEKYADKTQKFEDTINNVDEELTKYLIELSSEQLNQHESEILSSLLDSSRD LERIGDHSIGLVRLMEHNISKDITFSPAAVKEIDQLYHETHRMILDALKVVIDNDRELAD ELVERHKDIAHLERRIRKNHIKRMNNGECTPLAGINFIDLITPCTRITDHALNLVEKVIE DQI >gi|304427232|gb|AEEM01000007.1| GENE 16 11900 - 13048 1444 382 aa, chain + ## HITS:1 COG:SPy1694 KEGG:ns NR:ns ## COG: SPy1694 COG1820 # Protein_GI_number: 15675552 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Streptococcus pyogenes M1 GAS # 1 382 1 382 382 534 66.0 1e-151 MTKYIKADEFYYPYQVKKAGYLAIEGDTFGDWQAEVPSDADIIDYTGYSIAPGLVDTHIH GFAGADVMDNSKEALETMSHALLGAGVTSFLPTGLTASFETLDDICRTAADFAGQESGAR IQGLFFEGPYFTEKYKGAQNPSYMRNPSIVELDQWLESSKGLLRKIALAPERDDVADFIN HAKEKNVVVALGHSDATYEQAANAVEAGASVWVHAYNGMRGLNHREPGMVGAVYELPNTY AELICDGHHVHPSACDILMHQKNYDHVALITDCMSAGGLKDGDYMLGEYPVTVEKGTARL KSNGALAGSILQLKDAVKNVVNWGIASKAQAISMASLIPAISVGIDDKCGQIKKGHQADF IVFDKELDLQATYLGGEKVWNA >gi|304427232|gb|AEEM01000007.1| GENE 17 13478 - 13582 101 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKLTFYLGNVSNLLILIGSRRTDKRQSLWRFA >gi|304427232|gb|AEEM01000007.1| GENE 18 13669 - 14586 1166 305 aa, chain + ## HITS:1 COG:SPy1689 KEGG:ns NR:ns ## COG: SPy1689 COG0752 # Protein_GI_number: 15675549 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 305 1 305 305 590 94.0 1e-168 MSKKLTFQEIILTLQQFWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLQTGPVTSEVTYGLERLASYIQEVDSVYD IEWAPGVKYGEIFLQPEFEHSKYSFEISNQDMLLENFEKFEAEAKRCLDEHLVHPAYDYV LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEATREKLL KEDAE >gi|304427232|gb|AEEM01000007.1| GENE 19 14586 - 16625 2702 679 aa, chain + ## HITS:1 COG:SPy1688 KEGG:ns NR:ns ## COG: SPy1688 COG0751 # Protein_GI_number: 15675548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 679 1 679 679 1001 79.0 0 MAKNLLVELGLEELPAYVVTPSEKQLGDRMAAFLNEKRLAFEGIQTFSTPRRLAVRVTGL ADAQTDLTEDFKGPSKKIALDADGNFTKAAQGFVRGKGLTTDDIEFREVKGEEYVYVTKH EAGKAAKEVLVDIPEILSAMTFPVNMHWANNTFEYIRPVHTLTVLLDDEALDLDFLDIHS GRVSRGHRFLGHETEIASADSYEEDLRRVFVIADAKERQDMIVNQIKDIEKAQNVQVEID DELLNEVLNLVEYPTAFMGSFDTKYLEVPEEVLVTSMKNHQRYFVVRDQAGKLMPNFISV RNGNAEYLENVIKGNEKVLVARLEDGEFFWREDQKLKIADLVAKLDNVTFHEKIGSLSEH MKRSKVIAAYLAEKAGASAEESKALARAAEIYKFDLLTGMVGEFDELQGIMGEKYALLAG EDAAVATAIREHYLPNSADGDLPETKVGALLALADKLDTILSFFSVGLIPSGSNDPYALR RATAGVVRIMDAFGLKIPMDELIDNLYALSFDSLTYEHKAEVMDFIRARVEKMMSKSVSK DIKEAVLAGSNFVVAEMLEAADALVEASKAADYKAAVESLSRVFNLAEKAPADVTVDASL FENDEEKALAQAAAELNLSGSASDKLAQLFALSPVIDKFFDNTMVMVDNEAVKNNRLAIL AELTAKASSVAAFNKLNTK >gi|304427232|gb|AEEM01000007.1| GENE 20 16804 - 17061 369 85 aa, chain + ## HITS:1 COG:SPy1687 KEGG:ns NR:ns ## COG: SPy1687 COG4224 # Protein_GI_number: 15675547 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 85 1 85 85 113 83.0 9e-26 MNEKKIQRINELARKKKTVGLTGAEKVEQAELRKEYIEGYRRSLLHHIAGIKLVDEEGND VTPEKLKQLQRERGLHGRSLDDPNS >gi|304427232|gb|AEEM01000007.1| GENE 21 17200 - 18681 742 493 aa, chain + ## HITS:1 COG:lin2243 KEGG:ns NR:ns ## COG: lin2243 COG3711 # Protein_GI_number: 16801308 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 11 489 10 485 485 221 30.0 2e-57 MNKKQLQFDRLLAVLHQNSDYITAKSLSEQLNLSEKTVYRLVKEINQNYFPDELIIKKRG RGFKLNRLKNYATLINSKQNDFTPASRQLQILERLLTISPKKLLIYDLAQEYYVSDSVIM KDKIEIQKRLNPFHLKISTRTGYIFITGSELDIRRALADLVPTFSMIDIDNLSNTTNQSH FDLELAKIILEEIDQIETDLQARLPYPYNVNIFSHLYIMLERLKISSRKIANVEVVDIKM TDYDDSILKESKKIINDIGNRLGRSIDDLEINYLYQYLYSSRFQLSTHQQKIEFSTRVVS VTKFYFKKMEMTKSESINEQSPMFIDLANHISPLLRRLDNKIYIKNNMLHDIKERYADIF NQTEKVSLEMTEQFGFSMLSADEIGFLTLYFVRFKELNPTPIKAVVMCSSGIGISELLKV KIETAFQNLDIVKVVSSQNIKEILQNYPDIQLVITSVSLQEMLNVRTILVSALLTDEDKK NIQNAIREINYGN >gi|304427232|gb|AEEM01000007.1| GENE 22 18671 - 19054 423 127 aa, chain + ## HITS:1 COG:SP1620 KEGG:ns NR:ns ## COG: SP1620 COG1762 # Protein_GI_number: 15901457 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 16 125 15 125 142 73 40.0 1e-13 MVTDLYQYVSNQNFNNRQEVYEYLASQIDSQTLSQQEIESKFLEREAMGNIEIAQGVVLP HFEGAINRNKIIIIKPKHTIVDWSDTIVQVDLVIALMLTNGSDKSEVIDFVKNLASDDFI EKLKHKN >gi|304427232|gb|AEEM01000007.1| GENE 23 19079 - 19528 479 149 aa, chain + ## HITS:1 COG:SP1619 KEGG:ns NR:ns ## COG: SP1619 COG1762 # Protein_GI_number: 15901456 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 1 148 1 148 149 191 66.0 4e-49 MEIKDIIDRHLIITNLKCQTKNEVFQKMSHILLKEDYISDIENFIRDLYVREAEGQTGIG NFIAIPHSKSPFVKKIGVAIAINQTEIPWETLDGKGVKVIVMFAVGDDNEDVKEHLKLLS LFARKLGNDSVVEKLINSKTVDDVINAFI >gi|304427232|gb|AEEM01000007.1| GENE 24 19560 - 19871 573 103 aa, chain + ## HITS:1 COG:SP1618 KEGG:ns NR:ns ## COG: SP1618 COG1445 # Protein_GI_number: 15901455 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system fructose-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 103 6 108 108 132 78.0 2e-31 MKIVGVAACTVGIAHTYIAQEKLENAAKKAGYDVQIETQGTIGIENELTQQQIDDADIVI LAIDVKIAGMERFKDKKVLKVPTEIAVKSPNKLIEKAVEVAKK >gi|304427232|gb|AEEM01000007.1| GENE 25 19907 - 21010 1295 367 aa, chain + ## HITS:1 COG:SP1617 KEGG:ns NR:ns ## COG: SP1617 COG1299 # Protein_GI_number: 15901454 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Streptococcus pneumoniae TIGR4 # 6 367 3 361 361 414 70.0 1e-115 MKEIWKKMNLKGHLLTAISYLIPIVCGAGFLVAIGMALGGSSQSELIQGEFSFWDALATM GGTALGLLPVIIATGVSFSIAGKPGIAPGFVVGLSANAISAGFIGGMVGGYIAGFLALWI LKNVKVSDWAKGLMPTVIVPLLTSLISGLLMIYIIGIPIAAFTNWLTNFLQGLGSSSMLI LGLVIGTLSIVDFGGPINKTVYAFTLTLLASGVNEPVTALQLVNTSTPIGFGLAYFIAKL LGKNIYGQEQIENLKSAVPMGVLNIVEGVIPIVMNDLVRGIIAAAIGGAAGGATSMVLGA DSTVPFGGFLMLPTMTRPWTGLLAIIVNVVVTGVVYALIAKNKTAEDFASENDIDEEEIN LADIEIL >gi|304427232|gb|AEEM01000007.1| GENE 26 21028 - 21717 742 229 aa, chain + ## HITS:1 COG:SP1616 KEGG:ns NR:ns ## COG: SP1616 COG0036 # Protein_GI_number: 15901453 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Streptococcus pneumoniae TIGR4 # 1 227 1 227 231 369 77.0 1e-102 MKTAELSPSLMCMDLDKFTEQITFLNKHVQSYHMDIMDGHFVPNITLSPWFIQEVRKISD LPMSAHLMVEDPTFWVQELINIKCEWICMHAEVLNGLAFRLIDQIHEAGLKAGVVLNPET PIETIFPYIALVDKITIMTVDPGFAGQRFLEDTLEKIIELRHLRKKQGYSYVIEMDGSSS RKTFKRIDAANPDIYVIGRSGLFALDDDIEKSWHMMTKDYFEMTGKTFE >gi|304427232|gb|AEEM01000007.1| GENE 27 21830 - 22004 286 58 aa, chain + ## HITS:1 COG:SPy1678 KEGG:ns NR:ns ## COG: SPy1678 COG0176 # Protein_GI_number: 15675540 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Streptococcus pyogenes M1 GAS # 1 58 1 58 214 102 91.0 2e-22 MKFFLDTADVSAIKTINELGVVDGVTTNPTIISREGRDFETVIKEICQIVDGPVSAEV Prediction of potential genes in microbial genomes Time: Sun May 29 12:16:59 2011 Seq name: gi|304427119|gb|AEEM01000008.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00018, whole genome shotgun sequence Length of sequence - 98134 bp Number of predicted genes - 117, with homology - 93 Number of transcription units - 43, operones - 26 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 50 - 109 9.4 1 1 Tu 1 . + CDS 150 - 2135 2751 ## COG0021 Transketolase + Term 2148 - 2194 8.6 + Prom 2164 - 2223 11.0 2 2 Op 1 . + CDS 2275 - 2577 278 ## GALLO_0401 hypothetical protein 3 2 Op 2 . + CDS 2593 - 3327 278 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 4 2 Op 3 . + CDS 3332 - 4957 1303 ## GALLO_0403 putative ABC transporter (permease protein) + Term 4993 - 5023 2.0 - Term 4950 - 4987 6.4 5 3 Op 1 . - CDS 5015 - 6868 2068 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 6896 - 6955 5.8 - Term 6908 - 6942 2.0 6 3 Op 2 . - CDS 7005 - 7874 708 ## COG1737 Transcriptional regulators - Prom 7997 - 8056 8.3 + Prom 7881 - 7940 6.7 7 4 Tu 1 . + CDS 8027 - 9448 1716 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 9509 - 9554 8.3 + Prom 9452 - 9511 3.8 8 5 Op 1 22/0.000 + CDS 9557 - 10360 875 ## COG0263 Glutamate 5-kinase 9 5 Op 2 1/0.750 + CDS 10375 - 11625 1738 ## COG0014 Gamma-glutamyl phosphate reductase + Term 11686 - 11725 7.3 + Prom 11651 - 11710 4.4 10 6 Op 1 7/0.000 + CDS 11752 - 12726 1060 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 11 6 Op 2 7/0.000 + CDS 12729 - 13052 336 ## COG4839 Protein required for the initiation of cell division 12 6 Op 3 4/0.000 + CDS 13062 - 15326 2677 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 13 6 Op 4 1/0.750 + CDS 15333 - 16346 1267 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase + Term 16352 - 16389 5.5 + Prom 16378 - 16437 5.5 14 7 Tu 1 . + CDS 16545 - 17888 1591 ## COG0513 Superfamily II DNA and RNA helicases + Term 17895 - 17931 4.2 + Prom 17897 - 17956 6.1 15 8 Op 1 31/0.000 + CDS 18074 - 18898 1037 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 16 8 Op 2 34/0.000 + CDS 18973 - 19776 923 ## COG0765 ABC-type amino acid transport system, permease component 17 8 Op 3 . + CDS 19776 - 20519 612 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 20542 - 20578 4.1 + Prom 20522 - 20581 4.1 18 9 Op 1 . + CDS 20610 - 20834 261 ## GALLO_0417 hypothetical protein 19 9 Op 2 . + CDS 20898 - 21812 602 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 21826 - 21859 1.5 20 10 Tu 1 . - CDS 22110 - 23270 841 ## COG0582 Integrase - Prom 23453 - 23512 5.3 21 11 Tu 1 . - CDS 23610 - 25043 884 ## plu4324 hypothetical protein - Prom 25154 - 25213 6.0 22 12 Op 1 . - CDS 25456 - 25917 483 ## COG2314 Predicted membrane protein 23 12 Op 2 . - CDS 25971 - 26711 469 ## MGAS9429_Spy0796 hypothetical protein 24 12 Op 3 . - CDS 26714 - 27451 651 ## COG2932 Predicted transcriptional regulator - Prom 27471 - 27530 6.7 + Prom 27522 - 27581 9.7 25 13 Op 1 . + CDS 27624 - 27722 81 ## + Term 27739 - 27790 -0.6 26 13 Op 2 . + CDS 27817 - 27975 176 ## gi|171779680|ref|ZP_02920636.1| hypothetical protein STRINF_01517 - Term 27718 - 27749 1.8 27 14 Op 1 . - CDS 27852 - 28082 75 ## 28 14 Op 2 . - CDS 28118 - 28609 359 ## - Prom 28631 - 28690 6.6 + Prom 28581 - 28640 5.4 29 15 Op 1 . + CDS 28667 - 28879 257 ## COG1396 Predicted transcriptional regulators 30 15 Op 2 . + CDS 28908 - 29795 720 ## SH1800 hypothetical protein 31 15 Op 3 . + CDS 29798 - 30637 688 ## EF0113 hypothetical protein + Prom 30784 - 30843 6.8 32 16 Op 1 . + CDS 30898 - 31050 73 ## 33 16 Op 2 . + CDS 31043 - 31312 78 ## M5005_Spy_1216 phage protein - Term 31150 - 31206 4.2 34 17 Tu 1 . - CDS 31247 - 31897 423 ## M5005_Spy_1215 phage protein - Prom 32068 - 32127 6.3 + Prom 31836 - 31895 5.9 35 18 Tu 1 . + CDS 32103 - 32303 255 ## + Term 32339 - 32374 -1.0 - Term 32122 - 32164 5.2 36 19 Tu 1 . - CDS 32287 - 32646 401 ## gi|255283158|ref|ZP_05347713.1| conserved hypothetical protein - Prom 32718 - 32777 7.0 + Prom 32644 - 32703 5.4 37 20 Op 1 . + CDS 32747 - 32998 179 ## GALLO_0433 hypothetical protein 38 20 Op 2 . + CDS 33037 - 33177 118 ## 39 20 Op 3 . + CDS 33181 - 33282 66 ## 40 20 Op 4 . + CDS 33349 - 34185 373 ## SP70585_0039 putative phage-associated protein 41 20 Op 5 . + CDS 34188 - 34442 302 ## gi|171779692|ref|ZP_02920648.1| hypothetical protein STRINF_01529 42 20 Op 6 . + CDS 34442 - 34663 97 ## SPs1156 hypothetical protein 43 20 Op 7 . + CDS 34663 - 34917 258 ## 44 20 Op 8 . + CDS 34929 - 35660 769 ## SPJ_1885 phage recombination protein Bet 45 20 Op 9 . + CDS 35674 - 36672 936 ## SpyM50647 hypothetical protein 46 20 Op 10 . + CDS 36681 - 37124 371 ## COG0629 Single-stranded DNA-binding protein 47 20 Op 11 . + CDS 37136 - 37582 285 ## COG4570 Holliday junction resolvase 48 20 Op 12 . + CDS 37579 - 37719 88 ## 49 20 Op 13 . + CDS 37719 - 37979 185 ## 50 20 Op 14 . + CDS 38033 - 38203 218 ## 51 20 Op 15 . + CDS 38196 - 38360 221 ## 52 20 Op 16 . + CDS 38353 - 38883 382 ## SAG0577 hypothetical protein 53 20 Op 17 . + CDS 38950 - 39030 87 ## 54 20 Op 18 . + CDS 39044 - 39430 335 ## Sterm_0806 hypothetical protein 55 20 Op 19 . + CDS 39427 - 39675 199 ## 56 20 Op 20 . + CDS 39678 - 39893 137 ## 57 20 Op 21 . + CDS 39890 - 40018 120 ## + Term 40090 - 40121 1.8 + Prom 40138 - 40197 4.1 58 21 Tu 1 . + CDS 40396 - 40806 309 ## SPJ_1873 phage protein + Term 40892 - 40938 7.2 + Prom 40900 - 40959 4.8 59 22 Tu 1 . + CDS 40984 - 41592 397 ## + Term 41597 - 41626 1.2 + Prom 41599 - 41658 2.7 60 23 Op 1 . + CDS 41705 - 42136 401 ## COG3728 Phage terminase, small subunit 61 23 Op 2 . + CDS 42126 - 43376 867 ## LACR_2109 phage terminase large subunit 62 23 Op 3 . + CDS 43388 - 44920 1333 ## GALLO_0451 putative phage portal protein 63 23 Op 4 . + CDS 44889 - 45857 806 ## COG5585 NAD+--asparagine ADP-ribosyltransferase 64 23 Op 5 . + CDS 45874 - 46020 166 ## + Term 46022 - 46050 -0.0 + TRNA 46051 - 46137 55.2 # Ser GCT 0 0 + Prom 46053 - 46112 80.3 65 24 Op 1 . + CDS 46312 - 46956 859 ## GALLO_0453 putative phage scaffold protein 66 24 Op 2 . + CDS 46969 - 47346 662 ## GALLO_0454 putative phage structural protein 67 24 Op 3 . + CDS 47351 - 48400 1222 ## GALLO_0455 putative phage head protein 68 24 Op 4 . + CDS 48416 - 48565 213 ## 69 24 Op 5 . + CDS 48574 - 48918 228 ## GALLO_0457 putative phage conserved unknown protein 70 24 Op 6 . + CDS 48915 - 49232 304 ## 71 24 Op 7 . + CDS 49225 - 49578 367 ## Spy49_1475c hypothetical P protein 72 24 Op 8 . + CDS 49568 - 49957 319 ## LACR_1767 hypothetical protein 73 24 Op 9 . + CDS 49967 - 50449 677 ## EF1285 major tail protein + Term 50458 - 50491 3.1 74 25 Op 1 . + CDS 50502 - 50852 442 ## SEQ_1741 phage protein 75 25 Op 2 . + CDS 50900 - 51238 274 ## 76 25 Op 3 . + CDS 51231 - 54314 2842 ## COG5283 Phage-related tail protein 77 25 Op 4 . + CDS 54307 - 55185 808 ## SDEG_1616 phage tail protein + Term 55199 - 55239 -0.8 78 25 Op 5 . + CDS 55264 - 55863 511 ## LLKF_1082 phage tail component 79 25 Op 6 . + CDS 55860 - 60236 3194 ## GALLO_0466 putative phage conserved unknown protein 80 25 Op 7 . + CDS 60252 - 60587 532 ## SPH_0064 hypothetical protein 81 25 Op 8 . + CDS 60603 - 60878 185 ## GALLO_0470 putative phage conserved unknown protein 82 25 Op 9 . + CDS 60875 - 61138 449 ## 83 25 Op 10 . + CDS 61128 - 62411 1686 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) + Term 62426 - 62461 5.1 + Prom 62526 - 62585 11.9 84 26 Op 1 . + CDS 62684 - 63112 370 ## gi|296876013|ref|ZP_06900071.1| hypothetical protein HMPREF0833_0629 85 26 Op 2 . + CDS 63099 - 64157 599 ## gi|160947089|ref|ZP_02094256.1| hypothetical protein PEPMIC_01020 + Term 64193 - 64222 2.1 + Prom 64312 - 64371 7.1 86 27 Tu 1 . + CDS 64455 - 65063 554 ## COG2095 Multiple antibiotic transporter + Term 65150 - 65185 3.1 + Prom 65197 - 65256 6.3 87 28 Tu 1 . + CDS 65497 - 65619 61 ## + Term 65675 - 65709 3.1 + Prom 65856 - 65915 7.5 88 29 Op 1 5/0.000 + CDS 66017 - 67477 1965 ## COG1488 Nicotinic acid phosphoribosyltransferase 89 29 Op 2 1/0.750 + CDS 67474 - 68298 1134 ## COG0171 NAD synthase + Term 68306 - 68330 -1.0 + Prom 68395 - 68454 7.2 90 30 Tu 1 . + CDS 68517 - 69854 1733 ## COG3579 Aminopeptidase C + Term 69861 - 69898 6.4 - Term 69891 - 69930 8.1 91 31 Op 1 7/0.000 - CDS 69939 - 72167 2519 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 92 31 Op 2 . - CDS 72154 - 72762 482 ## COG3331 Penicillin-binding protein-related factor A, putative recombinase - Prom 72798 - 72857 5.5 + Prom 72583 - 72642 5.2 93 32 Op 1 6/0.000 + CDS 72837 - 73355 690 ## COG4474 Uncharacterized protein conserved in bacteria + Prom 73399 - 73458 10.7 94 32 Op 2 3/0.250 + CDS 73482 - 73823 427 ## COG3599 Cell division initiation protein + Term 73872 - 73910 2.5 + Prom 74365 - 74424 5.1 95 33 Op 1 . + CDS 74453 - 75625 1294 ## COG0116 Predicted N6-adenine-specific DNA methylase 96 33 Op 2 . + CDS 75684 - 77210 1842 ## GALLO_0484 hypothetical protein + Term 77211 - 77260 1.4 + Prom 77274 - 77333 8.7 97 34 Tu 1 . + CDS 77357 - 78121 215 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 78139 - 78176 6.4 - Term 78117 - 78176 4.2 98 35 Tu 1 . - CDS 78203 - 78688 650 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 78711 - 78770 8.6 + Prom 78708 - 78767 7.4 99 36 Tu 1 . + CDS 78839 - 80446 2223 ## COG1418 Predicted HD superfamily hydrolase + Term 80461 - 80494 2.2 + Prom 80584 - 80643 7.7 100 37 Op 1 25/0.000 + CDS 80699 - 81316 984 ## COG0194 Guanylate kinase 101 37 Op 2 3/0.250 + CDS 81340 - 81654 559 ## COG1758 DNA-directed RNA polymerase, subunit K/omega + Term 81679 - 81747 6.4 + Prom 81672 - 81731 4.9 102 38 Op 1 4/0.000 + CDS 81776 - 84166 2223 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 103 38 Op 2 20/0.000 + CDS 84212 - 85162 1119 ## COG0223 Methionyl-tRNA formyltransferase 104 38 Op 3 3/0.250 + CDS 85152 - 86474 1321 ## COG0144 tRNA and rRNA cytosine-C5-methylases 105 38 Op 4 17/0.000 + CDS 86512 - 87249 822 ## COG0631 Serine/threonine protein phosphatase 106 38 Op 5 1/0.750 + CDS 87249 - 89126 1929 ## COG0515 Serine/threonine protein kinase + Term 89127 - 89182 13.2 + Prom 89132 - 89191 1.8 107 39 Op 1 7/0.000 + CDS 89237 - 89932 611 ## COG4758 Predicted membrane protein 108 39 Op 2 19/0.000 + CDS 89929 - 90954 908 ## COG4585 Signal transduction histidine kinase 109 39 Op 3 . + CDS 90938 - 91582 840 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Prom 91589 - 91648 3.8 110 40 Op 1 3/0.250 + CDS 91701 - 93101 1596 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 111 40 Op 2 . + CDS 93101 - 93457 459 ## PROTEIN SUPPORTED gi|55820707|ref|YP_139149.1| hypothetical protein stu0628 + Term 93458 - 93506 9.5 - Term 93448 - 93495 12.3 112 41 Op 1 . - CDS 93571 - 94500 1274 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 94532 - 94591 5.3 - Term 94558 - 94601 3.1 113 41 Op 2 . - CDS 94604 - 95230 682 ## COG1739 Uncharacterized conserved protein - Prom 95389 - 95448 6.4 + Prom 95045 - 95104 6.7 114 42 Op 1 6/0.000 + CDS 95287 - 96588 682 ## COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) 115 42 Op 2 6/0.000 + CDS 96828 - 97247 180 ## COG1040 Predicted amidophosphoribosyltransferases 116 42 Op 3 . + CDS 97323 - 97871 770 ## PROTEIN SUPPORTED gi|225868030|ref|YP_002743978.1| sigma 54 modulation protein / S30EA ribosomal protein + Term 97887 - 97920 1.8 - Term 97880 - 97904 -1.0 117 43 Tu 1 . - CDS 97927 - 98085 62 ## Predicted protein(s) >gi|304427119|gb|AEEM01000008.1| GENE 1 150 - 2135 2751 661 aa, chain + ## HITS:1 COG:SPy1676 KEGG:ns NR:ns ## COG: SPy1676 COG0021 # Protein_GI_number: 15675539 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Streptococcus pyogenes M1 GAS # 1 661 51 711 711 1120 85.0 0 MTFDAIDQLAVNTVRTLSIDAIQAANSGHPGLPMGAAPMAYVLWNHVMNVNPKTSRSWSN RDRFVLSAGHGSALLYSLLHLSGYNVSIDDLKNFRQWGSKTPGHPEVNHTDGVEATTGPL GQGIANAVGMAMAEAHLAAKFNKPGFNIVDHYTYALHGDGCLMEGVSQEAASLAGHLKLG KLVLLYDSNDISLDGPTSKAFTEDIKGKFEAYGWQHILVKDGNDLEAIAKAIEEAKAETE KPSIIEVKTIIGFGAEKQGTSAVHGAPLGVDGIAYAKKSYGWEYPEFTVPEEVAKRFEVG IKFRGEAAENEWDTKFREYEAAYPELAAEYKAAFANKPVDVTLEDFEIGTSLASRSSSQQ AIQQISAQVPSFWGGSADLSASNNTMVKVESDFQPDNYLGRNIWFGVREFAMAAAMNGIA LHGGTRVYGGTFFVFSNYLLPAVRMAALQQLPTVYVMTHDSIAVGEDGPTHEPVEQLASV RSMPNLNVIRPADGNETNAAWKRALAETDRPTMLILTRQNLPVLEGTKELAAEGVNKGAY ILSEAKGDLDGILIATGSEVKLALDTQAALEAKGVHVRVVSMPAQNIFDEQDAAYKESIL PANVTKRLAIEAGSSFGWGKYVGLQGKTLTIDTWGASAPGNKIFEEYGFTVDNAVNLYES L >gi|304427119|gb|AEEM01000008.1| GENE 2 2275 - 2577 278 100 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0401 NR:ns ## KEGG: GALLO_0401 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 100 1 100 100 179 100.0 2e-44 MEEKCSELYKAIRNAYEDMTIRQDNDLSKILLSASNEVIRSGDAGLSALHLDRQLNLYST RHDFSLPKGAKSLKQLTQEFAADYRKSKEVSKWIKPLLGE >gi|304427119|gb|AEEM01000008.1| GENE 3 2593 - 3327 278 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 7 211 17 222 318 111 32 1e-23 MIRFDHVSKLYGDKEALSDVNMTIANGEIFGLIGHNGAGKTTTISILTSIIEASYGEVYV DELPLSEHRDDIKKRIGYVPDSPDIFLNLTAIEYWHFLAKIYDVDDKLTDERIERLSHLF DIAENINDLIDSFSHGMRQKVILIGALISNPDIWILDEPLTGLDPQASFDLKEMMKEHAR GGNTVLFSTHVLAVAEQLCDRIGILKDGKLIFIGTLDELKANHPDKDLETIYLELAGRKA QEEG >gi|304427119|gb|AEEM01000008.1| GENE 4 3332 - 4957 1303 541 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0403 NR:ns ## KEGG: GALLO_0403 # Name: not_defined # Def: putative ABC transporter (permease protein) # Organism: S.gallolyticus # Pathway: not_defined # 1 541 1 541 541 910 99.0 0 MNWSTVWELTKINILYSSPQSVTAAKRKQERKPSKGFSAYKSVMRQQILLSLLFAVIYIS MYANIDFRYFPGYFSFYIAIFFIMATLNAFSAMYSIFYESDDVRLYAHLPIKSSELYMAK VISSFGMGITFLMPLLSLFFIAYWQIAGLVLAIPLTIILFFVLFAAVILLALYLNSFVGK IILRSQHRKIVSTVLMSISTIGAVGAILYMNVINSQNMTYDDNVALADHTVLPYFRGFYD VVKAPFQSATVLNFWLPLLVLMILTVGVVKWLMPTYYKEVLYAKPKSKPKQKSSSASQKA LKGKSLKTMMIRHHMSTLQNATLLTQTYLLPLIYVVIFITPSVTNGVSLAEVPNDYFGVA MLIGIVLGSFCSTPSSFVGVGISLEKENLTFFKALPINFKDFLVQKFLTLVGLQALVPAI VYLLVGLFVLKAPLVLVIFFILGLLASILLQGQLMYRRDFKFLDLKWQDVTQLFNRHAGQ WLTLAIILIALVVGGSLGAGTFLLGALLKDVLLANVLFAILAVLIGIASQIVIYHTFWKK L >gi|304427119|gb|AEEM01000008.1| GENE 5 5015 - 6868 2068 617 aa, chain - ## HITS:1 COG:SPy0572_2 KEGG:ns NR:ns ## COG: SPy0572_2 COG1263 # Protein_GI_number: 15674662 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 86 446 3 362 364 226 36.0 1e-58 MSKEYQTLATQIIALVGGKENVANVYHCQTRLRFTLVDNLKADTEALEKLDGVTKVIINA GQYQIVIGTHVADVFEEIEKLVEISQDTTTQEKKGIFDTIIDFVAGTFQPIIPALSGAGM VKAVLALLVVFNVITTDSQTYYMLNVFADGVFYFLPILIAFTQAQKLKCNPILAAGVAAM LLHPNWSALVTAGDAVNFFNVIPFTLASYGSSVIPIILIIFVQSYVEKFLNKHIPKSINI VFVPMLTFLIMGTLAFSVLGPIGAIVGNYLATVFTFLAENASWAPALIIGTFLPIMVMFG IHNGVAPLGIMQMSQLGYDSIFGPGCVCSNMAQATAGAVVAFVTKDKTTKETAIPGSITA YMGITEPLLYGVNLPKRYPLIASMIGGGLGGLYAGLTHAHRFATGSSGLPAVLLYIGDNT MTYFYNIIIAIVISIISTAIITFVLAKHFEKEETTDNLDTTQAPVITGQEVMSPLTGEVL PIEKAEDEVFASKVMGDGVVILPETTDVYAPFDGTIATLFPTKHAIGLVSDKRAEILIHI GINTVDLNGEGFKAFVKQGDSVTKGDKLISFDKVAIENAGYSSQTMVIITNGSNYNQIIK HDNQFSQTGDLILELEK >gi|304427119|gb|AEEM01000008.1| GENE 6 7005 - 7874 708 289 aa, chain - ## HITS:1 COG:lin2846 KEGG:ns NR:ns ## COG: lin2846 COG1737 # Protein_GI_number: 16801906 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 16 281 15 283 283 112 26.0 6e-25 MTLLQDIEYLAQTRKDSKKDIANFILTHKTELAHLTLDDIQNQAYISKSSLVRFAKSLGF SGWKEFLVPLMEEIHQENHYFSDVDPDVPFTKNDDNLTLARKIAQLQIASIEDSLALLDD ALLTQAAYSIKKAKRVAIFGISPNNILAEVFRRRMAGIGKIIEVPRNDEMGLTSLSLTSE DLAILISYSGQIVQFPHHLLEHLSDCDVTTLAITSQEKSPLAQFCDFTLPISGREQIVGK ISGFASEESILFILNILYATYFSLDYEINLSYKQKMAELLETGRQDKHI >gi|304427119|gb|AEEM01000008.1| GENE 7 8027 - 9448 1716 473 aa, chain + ## HITS:1 COG:L121426 KEGG:ns NR:ns ## COG: L121426 COG2723 # Protein_GI_number: 15673653 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 473 1 474 477 676 65.0 0 MVLSENFLWGGATAANQAEGGVLEGGRGLSNVDLLPIGKDRATISSGEIEHLEWDDNHFY PAKEAIDMYHHYKDDIKLFAELGFKVYRMSISWTRIFPNGDDEMPNQAGLDFYRGIFEEL KKYGIEPLVTLAHFDVPVSLIKRYGGWRDRHLVDAYVRYAQTVMTAYKGLVNYWLTFNEI NILIHSPFVGGGLIFKEGDNKKQLMYQAAHHQLVASSLVTKMAHDIDSENQIGCMLAGGM HYPYSCRPEDYKEAIDSDRKNYFFIDVQARGYYPNYAKKMFEREQIELEMLDGDLECLKN TVDFVSFSYYSSRTVSGFEEDYETTTGNLFRSIKNPNLESTEWGWQIDPLGLRNALNQLY DRYQKPLFIVENGLGAKDVPDENGYVADDYRIDYMRKHIIALKDAVEIDGVELMGYTSWG CIDLISASTGQMSKRYGFIYVNRDDAGQGTLRRSKKKSFDWYKQVITSNGEEL >gi|304427119|gb|AEEM01000008.1| GENE 8 9557 - 10360 875 267 aa, chain + ## HITS:1 COG:SPy1672 KEGG:ns NR:ns ## COG: SPy1672 COG0263 # Protein_GI_number: 15675535 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Streptococcus pyogenes M1 GAS # 1 266 2 267 273 413 79.0 1e-115 MKRNFETVNRIVIKIGTSSLVMPNGKINLEKIDQLAFVISSLMNKGKDVILVSSGAMGFG LNVLNMDKRPTEIARQQAVSSVGQVAMMSLYSQIFSHYQTEVSQLLITRDVIEYPESLEN FTNAFEMLLKMGIVPIVNENDAISVDEMDHTTKFGDNDRLSAIVAKVTKADLLIMLSDID GLYDKNPNIYDDAKLREHVTEITDEIIKSAGGAGSKFGTGGMLSKIKSAQMIFDNNSQMI LMNGANPRDILKALEGANIGTWFSQVN >gi|304427119|gb|AEEM01000008.1| GENE 9 10375 - 11625 1738 416 aa, chain + ## HITS:1 COG:SPy1670 KEGG:ns NR:ns ## COG: SPy1670 COG0014 # Protein_GI_number: 15675534 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 416 1 416 416 572 72.0 1e-163 MGYIDELGKNAKVASQSLVKLGTAEKNQILGQVADALLAETDYILAENARDVDQAQENGI SPVMVDRLRLDAKRIEGIVEGVRQVADLQDPIGQVVRGYTNLDGLKIVQKRVPLGVIAMI FESRPNVSVDAFSLAFKTSNAIILRGGRDAIYSNTALVTVIRKTLAKAGVNENVVQLVED TSHAVAEELMQAVDYVDVLIPRGGARLIQTVKEKSKVPVIETGVGNVHIYVDDSADLDMA TKIVINAKTQRPSVCNAAESLLVHKAVAKTFLPQLEEAIAKVHAVEFRADDKALAIFKNA VAATDEDYGTEFSDYVMSVKVVDSVDDAIDWVNRYTTHHSEAIITKDLEHAERFQDEVDA AAVYVNASTRFTDGFVFGLGAEIGISTQKMHARGPMGLEALTSTKFYINGKGQIRE >gi|304427119|gb|AEEM01000008.1| GENE 10 11752 - 12726 1060 324 aa, chain + ## HITS:1 COG:SP0334 KEGG:ns NR:ns ## COG: SP0334 COG0275 # Protein_GI_number: 15900265 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 9 324 1 316 316 521 84.0 1e-148 MIYDIMKGMTTDFHHITVLLHETVDMLDIKPDGVYVDATLGGAGHSEYLLSKLGTTGHLY AFDQDQTAIDNAQIRLKDYIEKGQVTFIKDNFRNLASNLASHGVTEIDGILYDLGVSSPQ LDERERGFSYKKDAPLDMRMNRDQDLSAYNVVNTYDYHDLVRIFFKYGEDKFSKQIARKI EQARKVKPIETTTELAEIIKSAKPAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQQA IELLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPKGLPFIPEDMQPKLALVNRKPILP SEEELEVNNRSHSAKLRVARKVRK >gi|304427119|gb|AEEM01000008.1| GENE 11 12729 - 13052 336 107 aa, chain + ## HITS:1 COG:SPy1665 KEGG:ns NR:ns ## COG: SPy1665 COG4839 # Protein_GI_number: 15675532 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein required for the initiation of cell division # Organism: Streptococcus pyogenes M1 GAS # 1 107 1 107 107 108 65.0 3e-24 MTDKHRNEAISNALKRRIRKFSRIEKVFYGSIILTAITMAVSIIYLQSRNLQVQQEITNL NSQISDMQTDYDNAKQEVNELTSRDRIEQIAGNAGLTSQQDNIKQVE >gi|304427119|gb|AEEM01000008.1| GENE 12 13062 - 15326 2677 754 aa, chain + ## HITS:1 COG:SPy1664 KEGG:ns NR:ns ## COG: SPy1664 COG0768 # Protein_GI_number: 15675531 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Streptococcus pyogenes M1 GAS # 1 754 1 751 751 889 63.0 0 MKKLMNRFLDYVVKDRRTPNKNRERVGQNLMILAVFLFFVFVINFAIIIGTDTKFGHNLS TEASEVYQQTVTVQAKRGTIYDRNGVALAEDSTTYSIYAIISTSYVSSTGEKLYVKKSQY EKVAEILNEQLGIDKDEVLSQLKQDGLFQVSFGSSGSGLSYSTKSAIETAMDEAGIKGIG FTSTPGRMYPNGIFASQFLGLTQLKENKDGTSSLVGTSGLEAALDDILSGTDGKVTYQKD KNGNLLLGTETTVKQAVDGKDVYTTLSEPLQSYLESQMDIFQNEAQGTYASATVVNAKTG EILATTQRPTYNAQTLDGYSEDNLKTWNTLLYQNYYEPGSTMKVMTLASAIDDGVFNPNE VISTINGITVADTTINDWNVNEGMTSVQYLTYAQGFAWSSNVAMTSLEQKMGNDKWLTYL SRFKFGYPTRFGMLNEDSGLLPSDNEVTVAMSSFGQGIGVTQVQMLRAFTAISNGGVMLE PQFISQIYDPNTNSARVATSEVVGNPVSEDAADQTLDYMVTVGTDSQYGTLYNSTTGQPY IQVGDYSVAVKSGTAQIAASAEDGGGYLTGDNDYIYSVVAIVPSDDPEFIMYVTLQQPSE KFRAMYWQDVVNPVLERAMMIKDTLTSTAVTGTDTETEYTLKDYIGESPGDTAQELRDNL VQPVVVGSGSKIKKMSKKVGSNLSANEQILLWTGDLETVPDMYGWTKENVEKFAKWTGIK ITFKGSDSGTVTKQSVESETDIDGVKKITITLGE >gi|304427119|gb|AEEM01000008.1| GENE 13 15333 - 16346 1267 337 aa, chain + ## HITS:1 COG:SPy1662 KEGG:ns NR:ns ## COG: SPy1662 COG0472 # Protein_GI_number: 15675530 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Streptococcus pyogenes M1 GAS # 1 337 1 336 336 468 78.0 1e-132 MFLSLIAGIVAFVLTVFAMPHFIRIYQIKKIGGQQMHEDVKQHLAKAGTPTMGGTVFLTV GILVSLIFSLFVEKQNGASMGATAGILLVVLIYGIIGFLDDFLKIFKQINEGLTPWQKMS LQIIGGLIFYFVHVRPSGTDDLNVFGFDLHLGILYVFFVLFWVVGFSNAVNLTDGIDGLA SISVAISLVAYGIIAFAQRQFDVLLIIVTMIGALFGFFVFNHKPAKVFMGDVGSLALGAM LAAISIALRQEWTLLIIGIVYVFETSSVMLQVSYFKYTKKKYGEGRRIFRMTPFHHHLEL GGLTGKSEKWSEWKVDAFLWSVGAIASILTLIALYVF >gi|304427119|gb|AEEM01000008.1| GENE 14 16545 - 17888 1591 447 aa, chain + ## HITS:1 COG:SPy1659 KEGG:ns NR:ns ## COG: SPy1659 COG0513 # Protein_GI_number: 15675529 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 447 1 447 447 704 83.0 0 MSFNDFNFKPYIREALAELKFTNPTEVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF EKLDENSNNVQVVITAPSRELATQIYQATKQIAEKSETEIRVANYVGGTDKLRQIEKLKS SQPHIVIGTPGRIYDLVKSGDLEIYKAHTFVVDEADMTLDMGFLDTVDKIAGTLPKDVQI LVFSATIPQKLQPFLKKYLTNPVMEKIKTTTVIADTIDNWLVSTKGRDKNAQILEITKAL NPYLAMIFVNTKERADELHSYLVSNGLKVAKIHGDIPPRERKRTMNQIKKLSYEYIVATD LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLNGIAITLYKPSDDSDIRELEKM GIKFVPKMLKNGEFQDTYDRDRRANREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV DEKRKRERRAANRAKGRAERKARKQTF >gi|304427119|gb|AEEM01000008.1| GENE 15 18074 - 18898 1037 274 aa, chain + ## HITS:1 COG:L162009 KEGG:ns NR:ns ## COG: L162009 COG0834 # Protein_GI_number: 15672919 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Lactococcus lactis # 1 270 1 274 281 204 46.0 2e-52 MKKRRLLSFGFLFLLTLALAACSNQSQSSGKTVIKVATDSDTAPFTYKENDTFKGYDIDV VKAIFKDSKKYKVEFVTTAFDSILTGVDADRYQIAANDFNYNEERAEKYLFSDPISKSNY AITSAEGTSYDSLDDLSGKSTEVISGSNYAQVLEKWNDENPDKEPIKINYASSSTGLTTR VQHIENGTIDFILYDAISSNYLVEDQGFNLTVTNVTDDIGGETDGLEYLLFADTNEGAKL QKFVNKRIKELKDDGTLAELSEQYFGGDFVSTID >gi|304427119|gb|AEEM01000008.1| GENE 16 18973 - 19776 923 267 aa, chain + ## HITS:1 COG:SPy1658 KEGG:ns NR:ns ## COG: SPy1658 COG0765 # Protein_GI_number: 15675528 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 267 1 267 267 389 76.0 1e-108 MTLTTLAAGLSWYDKLVEKIPEGQLFSWRAVFDAIPSLIERLPTTLGLTIAGAIFGLLLA LLFAIVKINRTRVLYPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLKIRYGFDWNINA IPASVFAVTAFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVI ATPTLINSLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIE QIGRLIEKRMDIDTPQSSQKEVAGGIR >gi|304427119|gb|AEEM01000008.1| GENE 17 19776 - 20519 612 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 238 245 240 48 2e-62 MIKITNLTKEFSGQKVLDGLDVDIQKGEVLALVGASGAGKSTFLRSLNYLEKPDFGSIAI DDFKVDFQTISKEDVLVLRRKLAMVFQQFNLFERRTALENVKEGLKIVKKLPDSEATKIA KEELAKVGLSDRENHYPRHLSGGQKQRVALARALAMKPDVLLLDEPTSALDPELVGEVEK SIADAAKAGQTMVLVSHDMNFVYQVADKVLFLDKGHILEAGKPDDVFNHPKEARTKEFFA NYTKTYI >gi|304427119|gb|AEEM01000008.1| GENE 18 20610 - 20834 261 74 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0417 NR:ns ## KEGG: GALLO_0417 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 74 1 74 74 91 100.0 7e-18 MFLEIFSLYIKGLLLAIVFVFLVGIIWNFWRAARKLDKTAKERQAFLYDVLMMSIMTIPV LSFAFMAILLMFKA >gi|304427119|gb|AEEM01000008.1| GENE 19 20898 - 21812 602 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 303 1 306 306 236 40 3e-61 MYDTLIIGSGPAGMTAGLYAARSNLKVGIIEQGAPGGQMNNTSEIENYPGYDHISGPELS MNMHAPLEKFGVENIYGIVKSIEDAGDVKRVITEDASYEAKTIILATGAKYRTLDVPGEE EYTSRGVSYCAVCDGAFFRNQDLLVVGGGDSAVEEAVYLTQFAKSVTIIHRRDELRAQKI LQDRAFANDKINFIWDSVVKEIKGTDIKVSGVTVENVKTGELSEHKFGGIFIYVGVNPVT SMVADLGITDEAGWVITDERMMTPKAGIFAIGDVRQKELRQIATAVGDGAIAGQGVYQYI ENMT >gi|304427119|gb|AEEM01000008.1| GENE 20 22110 - 23270 841 386 aa, chain - ## HITS:1 COG:lin1765 KEGG:ns NR:ns ## COG: lin1765 COG0582 # Protein_GI_number: 16800833 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 2 372 5 375 391 174 33.0 2e-43 MKYTKTKYPNIFTYETKKGKRYYVRRKFKLHGKQTEVSASGLKTVAEARQALAEIENKIA NGDYDPRKNMTVNDYWQIYSENRIKTGRWAPDTVMTKTSWYNHHFSKQFGATLLKDIKRT KYEAYISSLLNSYSRATVIQINALFEAMVTDAVVNGYLDKNPILKIYIGKSNIPTKKKRL SLEEFRSWDECARKILSSYDYTMARLTYFGLRRSEVLGIKFSSLKLVNGRFRIFLDESRT ERRPEGGRMKTRTSKRYVLLDEETTDLLQKAMMFARQIAKESNRILGQNDFIFVDEGANL KKRRGEPIKYAHIATIFKKVSAESKIHATPHMMRHFFATQGQIAGVSIEHMAAALGHSTS YMTQQYTHIKDEVAGEVTDSFLRAIK >gi|304427119|gb|AEEM01000008.1| GENE 21 23610 - 25043 884 477 aa, chain - ## HITS:1 COG:no KEGG:plu4324 NR:ns ## KEGG: plu4324 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 1 477 53 533 541 321 40.0 5e-86 MRSIKKELKDPISDNEKDFIVNIKTASYIKQKYDDLFFDGSFSLHGLDQSTAYHEKISPF NFSLSERFKNYTIKEDMKNEIDLYKAFLSKAKVIVTTNYDTLTEDLLNSINEKPTIYVGQ KGFFDDTYNWSELFKIHGDVKDPSSIVITEEDYDKYDKNSILISAKILSNLINSPIIFLG YSLSDRNVQKLLSDFASQLPDGDVRKNSSRITVVEYSSGENELIEQIVNNTLLNISYSTI KTDNYSKIYKEISKINQGLTPYEVSKYESEVKNIIITAGAKGKLDSHLVSPQNLDSLSEE TKKRRIVVALGDKKNMFVNPSIPDYVEDYFLDNASFLPEVSLPVIAGEHTTARIPFVKYV KNINYQEYDFLSTRNKRKIERRISDMGSLQKLIDSIPKTNKKEYSTLEEILNSPGKMNKK LEIIVYNIKHLDRLKLLNFIQNNVLTEFRNNYNNSLSTSQQRRLLLAYDLLENGDLN >gi|304427119|gb|AEEM01000008.1| GENE 22 25456 - 25917 483 153 aa, chain - ## HITS:1 COG:SA1057 KEGG:ns NR:ns ## COG: SA1057 COG2314 # Protein_GI_number: 15926797 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 89 151 3 65 67 71 53.0 6e-13 MGKIIKVTGTEVTIANDDDYLKINPSELDFVPKVGDEVEVHKLEDEIIITKIEPKKDDKI NINIVNENNAVQNQSQVVNTSATVGGHYVNKWIYIILAVFLGGFGAHHFYAGYSGRGIKY LIFCWTGIPTIIGWFQAFGALFKTPNAEGKILV >gi|304427119|gb|AEEM01000008.1| GENE 23 25971 - 26711 469 246 aa, chain - ## HITS:1 COG:no KEGG:MGAS9429_Spy0796 NR:ns ## KEGG: MGAS9429_Spy0796 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS9429 # Pathway: not_defined # 61 233 39 217 226 101 35.0 3e-20 MTAIVLIIVVAIIFYRRKTKTKTAKPNTDVTVSSVEIEKYLDNNNEYFFDDRYSKLIEKR PDYASYTSGSYDSCYNDSFVTEEGYKLRELLLLVWWGRIKKGRDLDAKIPRYFYERYLIN PNNVTKKFFADDLIYVDDEGIVRFTEKGKELQEKYKALWEIHSIKEYPKNLDDDFQDWDY NKFMIKRHKENIEYSKASYKYHKDLLEFFRNFYPKTEDQITYYQDQCTFYLNEIDKLNAR IEALQS >gi|304427119|gb|AEEM01000008.1| GENE 24 26714 - 27451 651 245 aa, chain - ## HITS:1 COG:SPy0939_2 KEGG:ns NR:ns ## COG: SPy0939_2 COG2932 # Protein_GI_number: 15674958 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 142 244 1 103 104 153 73.0 3e-37 MTKEINSKERMQIIADNITYYRKLNGITQKELAEKIGIKPSTMTDYMKLRSAPSYGIIQK IADYFGVKKSDIDSTFKIAEEKSEIQSVYDKLYKCRQRKVLNYANQQLNEQENEVNNVVQ LFEYDYYDNAVSAGTGQFLSDVQKETITLPVEYDADFVVPVYGDSMEPEYHSGDYVFVKL SVDLSSGDIGVFELYGDAYIKEIIIEDNHALLHSLNTNGNYKDISVDADSDFRVIGKVVG KYRED >gi|304427119|gb|AEEM01000008.1| GENE 25 27624 - 27722 81 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKHNKKPKRREFEFEISILWFKLRFKNIIEW >gi|304427119|gb|AEEM01000008.1| GENE 26 27817 - 27975 176 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|171779680|ref|ZP_02920636.1| ## NR: gi|171779680|ref|ZP_02920636.1| hypothetical protein STRINF_01517 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 52 1 52 52 77 94.0 3e-13 MKWKKFLFGDIHYKNESADGNQEVEFKLKGGLIPNLVLLVLIIRLIAWLVVR >gi|304427119|gb|AEEM01000008.1| GENE 27 27852 - 28082 75 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLAINKKSVSDFVLSNIINFSILHNRAIDKINKSIFYLTTNHAINLMIKTNKTKLGINPP FSLNSTSWFPSADSFL >gi|304427119|gb|AEEM01000008.1| GENE 28 28118 - 28609 359 163 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAELISIISIMSNVAIIGINEYSKYKTALKAKELEHQLTVEHSKQQRAVEDFQNFLRAA GKVTAIVEKRIETDISEIFDFDSATFAVLVHLKEHERTTFLDFRNSLKINLSYPDADDTY LDDLINDMNKQSSELDKKLKSHRNRYYSLLNNCVEIAYDYINV >gi|304427119|gb|AEEM01000008.1| GENE 29 28667 - 28879 257 70 aa, chain + ## HITS:1 COG:SA1804 KEGG:ns NR:ns ## COG: SA1804 COG1396 # Protein_GI_number: 15927572 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 4 70 3 69 87 72 58.0 2e-13 MQWTLEALRVAAGLTQKELAEEFDVSSQTIARLENDSSNINIAMLKKYMTKFHVSFDDIF LGKKYENFVY >gi|304427119|gb|AEEM01000008.1| GENE 30 28908 - 29795 720 295 aa, chain + ## HITS:1 COG:no KEGG:SH1800 NR:ns ## KEGG: SH1800 # Name: not_defined # Def: hypothetical protein # Organism: S.haemolyticus # Pathway: not_defined # 1 214 1 224 308 117 38.0 3e-25 MNEIALSDNLAQIELEINHHKQIAGQSIWEIGRRLNHVKEHDLVHGQFMEWVESIGINYK EAQRMMKISSELPELDNVVQFGSSILYLIATLPDDEKQTQLDRIENGDNPTVRELQEVKR QLKLSQADNERLKVQNENLAEQALSKTEKVVEKEVVREVIPDDYQFFKSNYEASERNNEF YKQQNSELREEMKELERIIKEQQQNKASREELSELEERKQAISFELDSLKKIVEFNESVE TFLTTHASLQYSSDFSNLYNNRDLTLSLLDTINRLEKWIDDIKSELPKSEIIEGE >gi|304427119|gb|AEEM01000008.1| GENE 31 29798 - 30637 688 279 aa, chain + ## HITS:1 COG:no KEGG:EF0113 NR:ns ## KEGG: EF0113 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 17 244 3 230 271 103 30.0 6e-21 MRTYSHFAQGNIFNDGRQANVVYVTKNYQMFNFSKFNRNVFLSPEFLKQAEIGFVSPIIV NENMTVIDGQHRLSACQQLGLPVEYVVKEGLNEDDIVRMNTVQRPWKLINYIEAYANEGK EEYVKLLNLINTKDYYQSVAIISQIAFNSNTPRGMIEAIQEGTFEFHNYNKTVEFLAYLK LFKEKTRIPYRSNLSRALYMLFTYKKINMDTLIKKVVSTGLNEELIVKSPNYSECIKELL TAYNYRASVNYIDFAINAKGNVIINSEKHDWALDEYEKG >gi|304427119|gb|AEEM01000008.1| GENE 32 30898 - 31050 73 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKPKRYPYSGNKKESTFKTINLMIDDNSSVESVRNNRLAQIYSLERSKHE >gi|304427119|gb|AEEM01000008.1| GENE 33 31043 - 31312 78 89 aa, chain + ## HITS:1 COG:no KEGG:M5005_Spy_1216 NR:ns ## KEGG: M5005_Spy_1216 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS5005 # Pathway: not_defined # 3 89 2 88 88 117 78.0 2e-25 MNEIEKIFPYQEKEILSEVTTLQKSPYCQTEHLSDQLTKKLHHLEDYNSPIDDEAIRLAE VTAEFYKLLIQSPSIGAVVKEIVSEGHKR >gi|304427119|gb|AEEM01000008.1| GENE 34 31247 - 31897 423 216 aa, chain - ## HITS:1 COG:no KEGG:M5005_Spy_1215 NR:ns ## KEGG: M5005_Spy_1215 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS5005 # Pathway: not_defined # 1 216 53 268 268 378 91.0 1e-104 MSDILNQTQNTDNIRFVIEYICNPLRYIDQVSIFEQLRTALNIPLSLKGLIVSENGKIVS TTTSKTLCEAKKRFETLDSRLKELKVHSHVLKFCTQELLQENYFHAVFEASKGVFHRIRL LTGSSMDSASLIDQCFKLKEPIVIINGNKLQTLDEQSEYKGLKNLLLTIAHLYRNSKAHK LKYYNPDNLNDALTALTLMSLAHNLLDNCSNTRRLD >gi|304427119|gb|AEEM01000008.1| GENE 35 32103 - 32303 255 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEILERIAKSLESIDAELKARNADRKKLLEEAEQIEKKVIEIQADPFGLKNLKAAALAD KAKKKE >gi|304427119|gb|AEEM01000008.1| GENE 36 32287 - 32646 401 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|255283158|ref|ZP_05347713.1| ## NR: gi|255283158|ref|ZP_05347713.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] # 3 108 10 114 116 70 33.0 3e-11 MNELTNDAKYLLSSMYAQYLDRRKDNISKREARNFQNIDFIKENIMPEWSKEDVLDTCFE LQRHKCISAMSGDNTLFFIHLTTEAIAALELEFKEPTLKERIESVLDFAAKVKAAIPFS >gi|304427119|gb|AEEM01000008.1| GENE 37 32747 - 32998 179 83 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0433 NR:ns ## KEGG: GALLO_0433 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 83 1 83 83 132 84.0 3e-30 MDSVMQNFVDWLKGIIKETLNKLLEIERDDGFPELMDVTTTCDFLGIKYDTFQLYRYSDG FPKELPAKRCSKRAIKKWLENQI >gi|304427119|gb|AEEM01000008.1| GENE 38 33037 - 33177 118 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLFNWLFAKKQETIQSEPSFESHEVRAKRYDDFIHYMDRHRNEWG >gi|304427119|gb|AEEM01000008.1| GENE 39 33181 - 33282 66 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENEYFDTDEIMLIGFDTDGWHGCWGAKEEEGD >gi|304427119|gb|AEEM01000008.1| GENE 40 33349 - 34185 373 278 aa, chain + ## HITS:1 COG:no KEGG:SP70585_0039 NR:ns ## KEGG: SP70585_0039 # Name: not_defined # Def: putative phage-associated protein # Organism: S.pneumoniae_70585 # Pathway: not_defined # 1 254 23 259 262 197 46.0 5e-49 MKLLRKMPGGDTYTIIYLKLMLISLEDSGKIYFEELAQDLAEEMALLIDEDTEAVRMTLM FLTKKGLLTRHSDYEFFLEQVPEMIGSETASTRRSRKHREQKALQCNTNATKCNGDIDKE IELKKDINIDIKSEADTRENQSATADEKSDFNIFEYYQSRVGVLDGYQSQKLNDYIHIDN LSPELVKRAIDRAADNSKRNFGYVNSILKNWAQNGIKTIVQQDEEQRNFDVKKAQRTYSN QQPAKSNVPDWVDEDYKHEATAEEQAKLDELKKSLMED >gi|304427119|gb|AEEM01000008.1| GENE 41 34188 - 34442 302 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|171779692|ref|ZP_02920648.1| ## NR: gi|171779692|ref|ZP_02920648.1| hypothetical protein STRINF_01529 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 84 1 84 84 120 82.0 3e-26 MDVKETILNQHKTLKRIEELQKFMHGTSMLALGLHEDGVIEQPEDKLIFFETIHVFSHIL EDVLNGKDVPEAARDVLFPDEDKD >gi|304427119|gb|AEEM01000008.1| GENE 42 34442 - 34663 97 73 aa, chain + ## HITS:1 COG:no KEGG:SPs1156 NR:ns ## KEGG: SPs1156 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_SSI1 # Pathway: not_defined # 1 67 1 67 76 79 55.0 6e-14 MKIELLHVINGYRKFHLGFYDDMHQAIKALKNHVYAYSAISEPRFRKSMSGNSIRIDYGA KTCYYLLEARKVS >gi|304427119|gb|AEEM01000008.1| GENE 43 34663 - 34917 258 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFEIRLDDELITSSNNWREAHIEVIDFLLGDDSPTLKKLYQHYALYTDEDLFYELEGMTD KKITININFTVDVPVKVNQHILED >gi|304427119|gb|AEEM01000008.1| GENE 44 34929 - 35660 769 243 aa, chain + ## HITS:1 COG:no KEGG:SPJ_1885 NR:ns ## KEGG: SPJ_1885 # Name: bet # Def: phage recombination protein Bet # Organism: S.pneumoniae_JJA # Pathway: not_defined # 1 243 1 272 272 192 43.0 1e-47 MTTNEITQQKGGYLTDLQQLDGATLRNFVDPKHQASPQELQTLLAIVKNRNLNPFTKEVY FIKYGNNPAQIVVSKDAFMKRAEQNPNYDGFESGVIYENQTGELKSKKGVILPKNCKLVG GWCEVYRKDRSRPVYREVELSAYNTGKNWWGKAPGQMIEKVAIVAAVRDTFSEDVGGLYT TDEMEQAAPIDVTPQETQEDVIARKQAQIENWQNQKAQQEEAQAEPAQEEQTELLDENGE LVY >gi|304427119|gb|AEEM01000008.1| GENE 45 35674 - 36672 936 332 aa, chain + ## HITS:1 COG:no KEGG:SpyM50647 NR:ns ## KEGG: SpyM50647 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_Manfredo # Pathway: not_defined # 1 328 1 337 342 361 67.0 2e-98 MQELQVNVKQAEVEIVDREKFEQGINAVVAKYQNYTVTASTIKGDKKVLADLRKLQKQIS DERIKIKRELSKPTNDFDTYVKEASEPINDIINKIASDVKEFEDNQKAMRLDTVKGYIAN KCSEYLLDPRIFDEKATEFIKAGDFMADGVTLKKVTMKSLDDAITFELQKQQEFEKAKAA ISGQCAEYNMTDRPYIRMLNELTLVEVLEQIKSDYRFEQQKAEARKVQEAELARQQPTEP QEMPNFDPETGEILDSGRLSQKQETPVKTAQNSLKHYCQKMTFEVYFENSAEKDFFKTEL EKLGFEYKKNYAVTSYRKIKPLTQEELAEVLN >gi|304427119|gb|AEEM01000008.1| GENE 46 36681 - 37124 371 147 aa, chain + ## HITS:1 COG:SP1540 KEGG:ns NR:ns ## COG: SP1540 COG0629 # Protein_GI_number: 15901384 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Streptococcus pneumoniae TIGR4 # 1 147 2 156 156 160 57.0 6e-40 MNNVNLIGRLTKAPELKQTASNTSVLTGTLAVNRTFKSQNGEREADFINIVAWRQTAEII AQYCGKGSQIGITGRIQTRNYENQQGQRVYVTEVVAEHVDLLDGKSDGQQGQSNGYNQQP QQNSYMQQGNPFGNSNPMDISDDMLPF >gi|304427119|gb|AEEM01000008.1| GENE 47 37136 - 37582 285 148 aa, chain + ## HITS:1 COG:lin1248 KEGG:ns NR:ns ## COG: lin1248 COG4570 # Protein_GI_number: 16800317 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvase # Organism: Listeria innocua # 2 147 4 136 145 62 30.0 3e-10 MFLIPFEPKPQSRPRATIRGRHAAVYEDPKMMKWRKQVTDYIKENYDGCYFDGAVCVKVT FYMRAPQNVSKKPSERAKDKAKQLYSKYISERLWHVKKADLDNLIKSLFDSISKSEIVWS DDNIVCDLRARKFYSPNPRIEIEIEEIE >gi|304427119|gb|AEEM01000008.1| GENE 48 37579 - 37719 88 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKPKIEECYECGCKFREGTVDYDSIFQTGYCSDCLLEKIENNEEY >gi|304427119|gb|AEEM01000008.1| GENE 49 37719 - 37979 185 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRAGNRNRAKFTVTFVETKTGTPLDVCRNFRNWTIKNGLKSYVEIAEMLDITPNEVKKY LDLAKMPEYDSAVLKRMKEVMAQNRF >gi|304427119|gb|AEEM01000008.1| GENE 50 38033 - 38203 218 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISIYLVILAWLTFPMFVIYDKKKRVRFVTCGLLYYLIDTIKAYFNQKEIKGEDDE >gi|304427119|gb|AEEM01000008.1| GENE 51 38196 - 38360 221 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKQEIMSGMESIMQIAMCYCHPSVPDVDDWHAVHSIAETIYDELEKGEGEVDE >gi|304427119|gb|AEEM01000008.1| GENE 52 38353 - 38883 382 176 aa, chain + ## HITS:1 COG:no KEGG:SAG0577 NR:ns ## KEGG: SAG0577 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae # Pathway: not_defined # 36 176 34 177 177 109 45.0 3e-23 MNKQEAIDELENAIPDFILNDFQRGKETGLTYALELVEQLNDPEKPVVPQFVADWYEKYK NDFEYNLYRLCINFHERKLHEDLHEWFKFDKNKPIETLILMHKFGYEVEKEKLYTVELPN PNSPEHFVLRKNGVNKIIADCYLSDNWKLYKNTWLTESEIKKDFEWAWQLAKEVEE >gi|304427119|gb|AEEM01000008.1| GENE 53 38950 - 39030 87 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSMDGLNKTIAFFAITSLLYELIIS >gi|304427119|gb|AEEM01000008.1| GENE 54 39044 - 39430 335 128 aa, chain + ## HITS:1 COG:no KEGG:Sterm_0806 NR:ns ## KEGG: Sterm_0806 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 5 125 5 125 126 68 37.0 1e-10 MTIPKFRAWDRLTGEMFPVGIIDYSIQSIYIEEPNGLYGKRDFDEVKLMQSTGLFDMYGE EIFEGDVLKTYDGELAKVVWNKELACWEAEFLGEIVDLSEVADVKCNRSDCEIVGNIYEN PELLEEEK >gi|304427119|gb|AEEM01000008.1| GENE 55 39427 - 39675 199 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKKYIKTTPVEAIQVTHLNYYEVRGFAKPQNIVFGEIGLFHTIETLEGVMEFNDFDYLI KNQTGECYVCKKEIFKKTYREV >gi|304427119|gb|AEEM01000008.1| GENE 56 39678 - 39893 137 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFDTLKMLAYKFNEQKKHLKQNLKQFFCRHDYVRKENKTIFSFSSKYHLECSKCGKRSLI EPWLDYREEET >gi|304427119|gb|AEEM01000008.1| GENE 57 39890 - 40018 120 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRPKRYPYSRNQWEIETTVLYGGDNREYRLSREVNRITGEVR >gi|304427119|gb|AEEM01000008.1| GENE 58 40396 - 40806 309 136 aa, chain + ## HITS:1 COG:no KEGG:SPJ_1873 NR:ns ## KEGG: SPJ_1873 # Name: not_defined # Def: phage protein # Organism: S.pneumoniae_JJA # Pathway: not_defined # 1 126 1 126 134 148 64.0 7e-35 MSRAKELLDELQNLDMDIQSRIDEVSTLEAGLLSSPKWSADKVKGGKPRKVDDVYAQLII LKESIEHDTSEIISRKLELSRLINKVSDPKERAILRMTYILKQYPEDVMEHLKISQSTYY RLRKHATEEIDIFLES >gi|304427119|gb|AEEM01000008.1| GENE 59 40984 - 41592 397 202 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKIFKFDREVYSGAEIRERVDYYENESNRISELSKSNVKLAISDLKALKDEIEAEHHYF DKLLFQTIVTSFEDDNALVVNTYIEFISDIATHLHDTNNSKYLSDNIDEFRHALAYTDIK DLLDNEKTYGHHQAANVGRDLRAIGSGSQEYAFLSRTHAFLINPSNKSYKEMLKVWERTD GSLFDNETLKGYINKKLMNRFK >gi|304427119|gb|AEEM01000008.1| GENE 60 41705 - 42136 401 143 aa, chain + ## HITS:1 COG:L36274 KEGG:ns NR:ns ## COG: L36274 COG3728 # Protein_GI_number: 15672009 # Func_class: L Replication, recombination and repair # Function: Phage terminase, small subunit # Organism: Lactococcus lactis # 2 99 20 112 147 60 38.0 1e-09 MESATKAGYSENYAKAQSHKLLENVGIKTYINKRIAELEKHKIATADEVLQVFTSILRQE LTEEVTELDQTTGEFVTIEKKPSITEVIKAGSELMKRYPTKLELQKLKLEIEKLQSQVGG SEGQDEKIAGFLEKVKELVVDDS >gi|304427119|gb|AEEM01000008.1| GENE 61 42126 - 43376 867 416 aa, chain + ## HITS:1 COG:no KEGG:LACR_2109 NR:ns ## KEGG: LACR_2109 # Name: not_defined # Def: phage terminase large subunit # Organism: L.lactis_SK11 # Pathway: not_defined # 5 416 2 410 411 464 55.0 1e-129 MTVDLSSLYTPKQLSVLKYIWTHDWFICGLHGAKRAGKTVVNNDTFISELKRVRKIADKL GIDEPMYILAGTSSTSIQNNILQELYNKYGFEPKYDKHGSFTFCGVKVVQVYTGSISGLK RARGFTAFGAYVNEASLANEVVFKEIISRCSGDGARIVWDSNPDNPNHWLRRDYIGKNNG KIIDFSFKLDDNTFLSPRYIASIKAATPSGKFYDRDIDGKWTVAEGAIYSDYDANIHEVD ELPRMVRYFAGVDFGYDHLGSIVIVGETSDGKQYLVDGIAERYRVISWWTDRAKEFKAKY GNIAFWCDSARPEHVAHFQSAGLDAMNANKNVIAGIETVAKRFKENTLFIKRGVIPRFFD EIYQYKWKPNSTKDEPLKEYDDVLDSLRYAIYSDEVMKKQRNKGNQFDTLRAGFGL >gi|304427119|gb|AEEM01000008.1| GENE 62 43388 - 44920 1333 510 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0451 NR:ns ## KEGG: GALLO_0451 # Name: not_defined # Def: putative phage portal protein # Organism: S.gallolyticus # Pathway: not_defined # 1 475 1 472 491 655 70.0 0 MAYTETFVDSTGQTHTLKPRFHRQARMRYRVESTEELFAEDFKLLKQYINHHQTVQRQRI QELLDYAEGNNHTILESERRKDQDMADTRAVHNFGEYIATFKQGYLVGNPIQVSYDDSDN ESVVEFLDEISKDNSFHQLNRSLVLDLSKTGRAYDLVYRTQEDETKAVKLDPTSTFVIYD MTKEEHSLVGVRYYNKNQFADTHLIVEVYTPDEILTFDSSKDFKLIDQAPHAFEIVPITE YLNSSNGMGDYESVLSLIDLYDASQSDTANYMQDLSDAILAIIGRVSFPADCDTAEKQID FMRNMRKARLLNLEPPVDANGNEGSVDAKYLYKQYDVNGTEAYKNRVISDIHKITNTPDL SDDNFSGTQSGEAMKWKIFGFDQKRVDMQALFEKSLKRRYKLIARISEILKEIKDFELSK IRVTFVPNLPADTSSVVANAKNLYGVVSDETVFSMLQTATGVDAKTEMERIKAQQESSSL LSRQLEMNSRLSDKDLNGDDNGKQVLEEED >gi|304427119|gb|AEEM01000008.1| GENE 63 44889 - 45857 806 322 aa, chain + ## HITS:1 COG:SPy0975 KEGG:ns NR:ns ## COG: SPy0975 COG5585 # Protein_GI_number: 15674985 # Func_class: T Signal transduction mechanisms # Function: NAD+--asparagine ADP-ribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 3 290 6 307 541 243 43.0 5e-64 MVNKYWKKRIELEQLAKIERDASLGEEFQRLYNYHYKEMEKEIQAFYNRYADKNNLPIEE VCKRVDEMDVKAFEEKAKRYVAEKNFSQEANRELGIYNLKMKTNRLELLQRQLDLELIAL GNDEQKRTKDFITEDYMQELKTQAGLLGKSALTQTEIKQTVQTLLNTPFKGATWSENIWK RQNALRQVVAQMTEDLILKGKNPTTYIAQLRQEFEVSASQAKRLAVTEGARVATEAQRQS LIANGYEEYEYIAEPSACPHCAALSGKIFKVKDMMPGENAAPMHPHCRCSTAAHYSKSQE EYEAMLDKSRETPLGVPINWEE >gi|304427119|gb|AEEM01000008.1| GENE 64 45874 - 46020 166 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIWNLLSFTFGLLLFLLLAFAICVSIGLLIVFIIGIFKGLKNGLENNN >gi|304427119|gb|AEEM01000008.1| GENE 65 46312 - 46956 859 214 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0453 NR:ns ## KEGG: GALLO_0453 # Name: not_defined # Def: putative phage scaffold protein # Organism: S.gallolyticus # Pathway: not_defined # 3 214 2 211 211 184 59.0 2e-45 MEQQQLLALNARNLQFFAEGGEAGAPEGGGNDGIGIDPIEGNGAEGTNPTFEAPKTQSEL DSIINKSNQKTLENYKKGEAQRIQDAIAEALKKEKDYSQLSEEERAQREFEDSKKAFEAE KSEFEHEKLVVQVQKDLVSKGLPSEFAELFALDNAENSLKKVGEFEAVFNQAVAEAVKIS LRQKAPGIGVGGVNQSNYGASLAQNANASGQKLF >gi|304427119|gb|AEEM01000008.1| GENE 66 46969 - 47346 662 125 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0454 NR:ns ## KEGG: GALLO_0454 # Name: not_defined # Def: putative phage structural protein # Organism: S.gallolyticus # Pathway: not_defined # 2 124 3 120 121 146 67.0 3e-34 MSKTFFGNAEILHNTPYEAISVLVDKTTTGTVVENGRKVLKAGAILSGDGASIFDDRTKK VKVETNPSETTYVDGILLYDVDVTDKDAIASLVYRGTLREDKIGAGTVDANVKAKLPHIQ FVKGA >gi|304427119|gb|AEEM01000008.1| GENE 67 47351 - 48400 1222 349 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0455 NR:ns ## KEGG: GALLO_0455 # Name: not_defined # Def: putative phage head protein # Organism: S.gallolyticus # Pathway: not_defined # 1 349 1 348 348 446 67.0 1e-124 MPLIYDTVTASNLAGYWNARQQQVDSTIGEKFFPARKQLGLKLALVKGSAGLPVVLKPSA FDTKATLRERMNVTLDEQEMPFFKESLLVKEQDRQQLNVIAQTGNQALIDTIVSGIFDDN AALLAGAHARLEAMRMQVLATGKIAVISNGVPQDFDYHVADDHKGTVKTAWTDLATSTPL ADIEAAVSALENLGSTPEVIILNPKTLSQIKNAKSTLALIKPTAPDASAVKKSELYDYLE SELGLKVVVKNQTYKDSDGVVKKYYPDGHITLAPNAELGETVFGTTPEESDLLGGSVTNA KVEVVDTGITVTTTTKTDPVNVETKVSMIALPSFKNLDDVYMLTTVPEV >gi|304427119|gb|AEEM01000008.1| GENE 68 48416 - 48565 213 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKVIAGFRDKLTDVIYPAGSDYNGERIEELTKAGFLKKEAKTKSKKTE >gi|304427119|gb|AEEM01000008.1| GENE 69 48574 - 48918 228 114 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0457 NR:ns ## KEGG: GALLO_0457 # Name: not_defined # Def: putative phage conserved unknown protein # Organism: S.gallolyticus # Pathway: not_defined # 5 114 8 118 118 128 59.0 6e-29 MDDFEETVLINVKEDLGISDVLQDKVLKRLISKVCDHFKLAYGTEIIDNKFSFIIEDCTI KRFNRRGAEGASSETIEGHSVTYDDVKYEFLPYDDLLQKEFSTGKTKNGRVFIL >gi|304427119|gb|AEEM01000008.1| GENE 70 48915 - 49232 304 105 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MREVQRATLILESGKPRYNPETGRMEGKEPQEIVVPCFVSDMGIELKNQLLDNKSNVDAK IMRANVPITQPIASVNIGGKKYYVINRKGFFYRRSAIYLSEVNND >gi|304427119|gb|AEEM01000008.1| GENE 71 49225 - 49578 367 117 aa, chain + ## HITS:1 COG:no KEGG:Spy49_1475c NR:ns ## KEGG: Spy49_1475c # Name: not_defined # Def: hypothetical P protein # Organism: S.pyogenes_NZ131 # Pathway: not_defined # 1 110 2 113 118 95 50.0 7e-19 MTNISFKGDQELLNALEKMARTDVYKEVVKKNGSSLQKMAQRKAVFTKGYSTGATKRSIK LELETSGLEARVKATTNYSGYLEVGTRKMEAQPFMQPAFNEIQPKFIKDLRRAGIVK >gi|304427119|gb|AEEM01000008.1| GENE 72 49568 - 49957 319 129 aa, chain + ## HITS:1 COG:no KEGG:LACR_1767 NR:ns ## KEGG: LACR_1767 # Name: not_defined # Def: hypothetical protein # Organism: L.lactis_SK11 # Pathway: not_defined # 4 128 3 128 129 72 31.0 6e-12 MLNKQPDQQIHDELIKRSTLLGLPAFPFLPDDSESYPFMVVAYTQIIPQPTKTKLIGEIA VQCDVWGNTDDRKLVSDWVGKLMEEFSNIRQINGRQWFMDLTSSTQIVKDNSTPELLYHG ILDLKFKFH >gi|304427119|gb|AEEM01000008.1| GENE 73 49967 - 50449 677 160 aa, chain + ## HITS:1 COG:no KEGG:EF1285 NR:ns ## KEGG: EF1285 # Name: not_defined # Def: major tail protein # Organism: E.faecalis # Pathway: not_defined # 4 155 6 160 170 129 45.0 2e-29 MANHGKDKILMFRKLGDKTAAAKLALQTEHKWKYERKNDSTATKDGSVVSDKGLEVTLSI EAVSTRDELNTMLKKSVVQGYKLEVWEIDLAGEKQGEKYPALYAQGSLGSWEVPDSVEDL ETLSTEMTIEGKPVEGYATLTADQVKEINYAFADTAEIAD >gi|304427119|gb|AEEM01000008.1| GENE 74 50502 - 50852 442 116 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1741 NR:ns ## KEGG: SEQ_1741 # Name: not_defined # Def: phage protein # Organism: S.equi_equi # Pathway: not_defined # 3 104 2 102 119 75 40.0 5e-13 MKEIEINGKKYDLHFGIDFIREMDKRYQLVNENGVSFGLGLTNAVVYIQDKNPVILADII LSATHTLKSIPSLADIEKWLEEQEDLEKVFDDFLSALKTAPLTKSKVREMLEVVKD >gi|304427119|gb|AEEM01000008.1| GENE 75 50900 - 51238 274 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLASALGLYGVGSILEAKRMTLEEFNVRKRGYLMQRLEREREIHLQAYLNRLIKATDKSG KNYLYGNFNDFYNEAKARNTVLGNGHGEPVSSDLIAIAKRRQKLLRKGDNNG >gi|304427119|gb|AEEM01000008.1| GENE 76 51231 - 54314 2842 1027 aa, chain + ## HITS:1 COG:lin2383 KEGG:ns NR:ns ## COG: lin2383 COG5283 # Protein_GI_number: 16801446 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Listeria innocua # 22 424 52 463 1601 205 32.0 4e-52 MADNSYTVEAVLKADTSSFTSNIKSAGSAVEEFTNNAKTKLGSVGDKFEKVGSSLSKKLT APIVAGVGASVKTFTSFDDSMRKVAATSGIAADSSSKSYMAMRKQAQDLGATTRYSASEV AEGMNYMAMAGWSAEQTMAGIPAVLDLAAASGENLGTTSDIVTDAMTAFGMQAEQAGEFA DILAAASSNANTNVSMMGDTFKYVAPVAGSLGFNAKDTAIAIGLMANSGIKGSQAGTALR AGLVNLVHPSEAAQKAMDSLGISVTDSEGNMKSFRTIMGDLREKMGGLSETQKASAAATI FGKEAMSGWLAIINSSDGDFNKLANAIDNSQGATKRMVDTMEGGLGGSFRNLKSAIEGLG IAIGERLAPYVKKAAEFVTELAQKFKSLSPAQQDQIIKIALIVAAIGPLLVVIGKTLKVL KTVITVVQFLLNPWTLLVIAIAAAVAAFVYFYNTSAKFRSFIQKVGQVIATVFKAIVGAV VGAAQFWVTAWNTMTSIVSTAVNTIRSVWNGIKEWFINLWSGITEWFSNLWNGIKEAPSN AAESIKNTWSNIKEWFANLWDSIKETFSNAWQTIVSVVMPIIQPFIDNIITAWNGLKESF SQIWEGVKQIFQGAWEVIKAIVMGPVLIICDLITGNFSQLGTDLELIWNSITTGISMVWN GILAYLTGIWNGIVTVAQTVWGTLATFMQELWTGITSAAQTAWEWLKNTVSTIVSNLVSN VVNFWNNLKSNVVNIANGIRESAVSAWNSLKSGVSSIVNGLVGSVIGWWNNLRSNVISIA QGLVSGAVSAFNGLVSGVSSVINSVKGVLNSLANINLASAGQAIMDGFLGGLKAAWGKVQ SFVGGIADWIREHKGPISYDRVLLKPAGQAIMRGLDEGLNSMFGQVQSTVQDVTEIFEDF SPINTISLGLETNTKTLTDNLKTFREEVENNVADFNAQIADMMTSNYSYQFESGKYSNNI EVTYRNQENEKLEVIKEAIATVRDAVSRDTILNINGREFARATGDDTSAYQNNKQHIKNL VWGIKDV >gi|304427119|gb|AEEM01000008.1| GENE 77 54307 - 55185 808 292 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1616 NR:ns ## KEGG: SDEG_1616 # Name: not_defined # Def: phage tail protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 205 1 190 494 95 27.0 2e-18 MSNFTFKGVDLSPFLDVLEINRTVGNERTLTTEDLIETGVELQQVSYGAKTIKVKVALAS RAIPATTFVDTIEYPTTSNNNINTLREHVAMLLRAKEPYKLELPDEPNRFYMALPNGDIE LDGISDWYDQTTIEFLVPDGLAHTNSTREFEFAKNSDGVWETEIVNDGGEDVTVDYEIKL KKESGFVGIVSEYGAMQYGKIDELDGYIDQKNVILHENKNGDFDEWVDGTVNYENSQKII NTKMGADKAYGGRLGILPAFSTSGTSGAYQYGAIKELELSETAQNWYIWARA >gi|304427119|gb|AEEM01000008.1| GENE 78 55264 - 55863 511 199 aa, chain + ## HITS:1 COG:no KEGG:LLKF_1082 NR:ns ## KEGG: LLKF_1082 # Name: pp153 # Def: phage tail component # Organism: L.lactis_KF147 # Pathway: not_defined # 2 199 320 510 510 96 30.0 5e-19 MAIEKNDTIGNTAQIRFLVGDGAGGSRVVDPTFSFTPSCWFPPNPYSSEGRQENKDANMF DILKDSETIGFYWYGSRFNVKEPRLKNTKAKKVQFFVGQYAGRNTTDRIVTLHSLNYFRF EKLHVDYWKDIPNRYRAGSTIKIDGANGQFFVNNQRKQEDEILGTAYFKVPPGKTKVRLL VSSFSEVESAKATIEEAYI >gi|304427119|gb|AEEM01000008.1| GENE 79 55860 - 60236 3194 1458 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0466 NR:ns ## KEGG: GALLO_0466 # Name: not_defined # Def: putative phage conserved unknown protein # Organism: S.gallolyticus # Pathway: not_defined # 542 918 467 853 1658 545 82.0 1e-153 MSKNNVRIAIRDSTDSHSVGFFDNVAGIKYKKAEIQRFLAGSASILTLQYNSKDIDTIRT GCKLAFRYKARDYWLNIMKFEKQGFEVEITACSLHLELNNEERGAHKPDKAMSFAEYLAY YDPEHSVTLGINQVSDKRIKLEWTGTDTILARLFSIANSFDTELEFVTELNDDYSLKRHV LNVYKKGNLGSNKTSSPVRVGKELKVINYSDSIEDLRTAVRATGKDGLTIDGLNKKIYDD NKQLLYYSSGNTVYAPQSRDRFPSVGQASNDNWLVKDLGETEYETKEGLWGYMYGEIQKI CLPKIEYKVTGAIDSDVGDTQTLIDDVHYEPPLYLKARVSELTDDILQGKVIDSTFINFE RQYSQIADSLLKQVEALAEDAAPYIVRLSTDNGYNFKNGQGTSTITAKLEKYSKIVNANW KWLINNSIVSETSSVTINASQVVGTLNVVAVASVDGNEVAREYITFTNSDDGVGIKSIKR YYTTNDQAEGVTAGGQNWSTKPTTVTADKNYMWSYDVITYTNDTSLVTEPAVIGARGDDG LDADTTGITEALDKAKQELTALSANIEKVRDDSLAAVEEAKQQLTAVANDLSTAKQDLQA QASQLTAQASAQSELTKRVSTVEETANGTKSTVSELTKTVAQNGKDITSVTARTKVVEDD LTSTKTTLSQVQTTADSTSQKTATLETGLNGLNAKFETLKIGSRNYFKNSKSRKYYINST ETQDVRTYIDDEFWQNDTRFTKNYVRMSFDIAFNPALPSNFTTNVHFSASPWYNCGGITF KGGTTALQHFDLKFDLSGASKSYKTDNVFIRLNNTLPLNTAVSLENFNLYLSAVVEDYNQ NEADIESKVAEYRQTAEQNYASLQSNLQTLDGTVKQNKSEFDQTASQIKSSISAVEGKAS ELDGDITKLNTTLTQTANGLEQLSTQVTSQGNTITSHTNSINSLSTGLSAKVSQTDFNTL SGRVTTAENNITAKANELSSKISSVEGKIPTRNDFRNLYIIANSSAGYIQANNASVLGTQ DSVFKEWTSDYIPVSAGEKYTFQTWVTLTGSQQGWRAWQFYNEDKSLNGGRWAATYSSDQ QAQHVITIPANAKYLRVSARLYSDGKIMVEKGDTYQNYALAPEDYDSKLASAQSEIKQTT DSIKASVSALDSSTVKTATLNLDNNGFVTKVGKTVNGNTFATMIAQNESDVQIIAKKMKV SGDMIVNGAITAEKLNINSLSALSADLGDVTSGSITNSFVDYTRSGTIKIDNSITIDTKD TSATVANKANQHIKMNSSGFALTAENSNNTPAYSMQIMPESINFNKLDYDTTRGGTSGWS LTHNGYYSMLQVDMVWQNVRLNNTSNLMYGIGANYVRIGNLVTISINRQISNIAVVAENE IASEKIPEGFRPISQAHLVLVGGTNKSIDATCIVHLNPDGSIGFTNNKTGNHVWSGTVTY TCVEPMPYVKDLNNGSTI >gi|304427119|gb|AEEM01000008.1| GENE 80 60252 - 60587 532 111 aa, chain + ## HITS:1 COG:no KEGG:SPH_0064 NR:ns ## KEGG: SPH_0064 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 4 104 11 111 116 120 53.0 1e-26 MTELLDTTKITQPFDLPTAVKYMRENGEYIRYRSNGYDFYMYISKEQKPVVVNGKRQLKE FEKIYGISQYGGSITNIPLADLLDAKCYIMQFDESGNPIWNEPTETNASEA >gi|304427119|gb|AEEM01000008.1| GENE 81 60603 - 60878 185 91 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0470 NR:ns ## KEGG: GALLO_0470 # Name: not_defined # Def: putative phage conserved unknown protein # Organism: S.gallolyticus # Pathway: not_defined # 1 91 1 91 91 86 69.0 3e-16 MWKPEIISMILSASVSVLTLFTFFQSRMTNSERRTTILEEKDKQHDKELIEIKKRLDNHD KQNEALIRLTTEITNLSEKVEKIDNKLEELS >gi|304427119|gb|AEEM01000008.1| GENE 82 60875 - 61138 449 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVILIAATVVAPIISALVNVVKEQFGLNGKLVSGLAILIGVLVGLAYAFTIVHGQYAEY CWGGLIAGLSAIGYYEIAFKEGGSDEK >gi|304427119|gb|AEEM01000008.1| GENE 83 61128 - 62411 1686 427 aa, chain + ## HITS:1 COG:SPy1006 KEGG:ns NR:ns ## COG: SPy1006 COG3757 # Protein_GI_number: 15675010 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Streptococcus pyogenes M1 GAS # 88 257 207 375 444 136 44.0 6e-32 MKNKINRVLVAFVTLASLLLQSTAYAAVGDQGVDWSRYQGKNGIFGYGHDKFAICQIGGV NGGGMYGQTTYETQVASAIAQGKRAHTYIWYQVGGNASLGEQVLNTFLPQVQTPKGSIVA LDYESGASADKQANTNAILHGMRMIKAAGYTPMYYSYKPYTVANVYVDQIIREFPNSLWM AAYPDYNVTPTPNYNVFPSMDGVAIYQFTSTYIAGGLDGNIDLTGITDNGYTKNNNPKSE TPAISQGQQADNTPKSDIAVGNQVKVKFSANAWATGEGIPDWVKGRTYEVAQVSGSRVLL SGINSWINKSDVEIISVANTQATQVTATSTYTVQSGDTLSGIASKFGTSYQTLASLNGIS NPNLIYVGQVLQVTGSESTGSVYYTVRAGDNLSSIASRYGTSYQSIAALNGLANPNLIYA GQTLKIK >gi|304427119|gb|AEEM01000008.1| GENE 84 62684 - 63112 370 142 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|296876013|ref|ZP_06900071.1| ## NR: gi|296876013|ref|ZP_06900071.1| hypothetical protein HMPREF0833_0629 [Streptococcus parasanguinis ATCC 15912] # 1 137 1 139 139 131 49.0 1e-29 MSMKELANHIIAVAHDNELPITNLQLQKILYFTLRNSRRYLDEDTLKETYNEPFLVWRYG PVVESQYNRFYSYGSSPIIDSFNQIPKYENLNQMILHFLKIDVFRMVDASHTHKFWKENS PRIKFGRSDIEYPLEEVLRDNQ >gi|304427119|gb|AEEM01000008.1| GENE 85 63099 - 64157 599 352 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160947089|ref|ZP_02094256.1| ## NR: gi|160947089|ref|ZP_02094256.1| hypothetical protein PEPMIC_01020 [Parvimonas micra ATCC 33270] # 186 324 5 141 153 93 35.0 3e-17 MITNDKQSNLYTKYFELFTNDENGKYTQSSDNEEEELDDTDSSLTDSFAPNDKLKQDLED LKALIKRELKGNDINKDRLNYSLITKEFYARDANYDGFSFIQKLQRYLDASDEASDIIFK LLRHTELALVQKSSLSDRINDLEQQLNAQVNKSKVLTKKLEETNNEWNQKISDLDGQLKS LVTEIIGIMGVFATIIFAVFSGFNEITTLGGALSKTPVSKVMIYVGITFIVLIGIVFISY LAVGSFFEIDLRSCGCKIGDKCEHELIEKHPTVVAFIWLGLSFVAIGAILILYRDYINVF QINFMGYNLQILVLLFCLITVPIIGVYMILKKRISKFFSRLKIKLATTSDSK >gi|304427119|gb|AEEM01000008.1| GENE 86 64455 - 65063 554 202 aa, chain + ## HITS:1 COG:BS_yvbG KEGG:ns NR:ns ## COG: BS_yvbG COG2095 # Protein_GI_number: 16080438 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Bacillus subtilis # 7 199 9 206 211 111 34.0 9e-25 MKEFGLMFMAFFAIMNPLSNLPAYMALVADDNDRISHKIATKSLLIAFVVITFFVMTGHL IFNLFGITLSSLRIAGGILVAIIGYHMLNGVHAPSAKGMESQPSDPMEVAISPLAVPLLA GPGTIATAINLSHGDIKKQVMTILAFGLLCLLTYFILREAKRISSALGKSGMSIITKMMG LILTTIGIQMLVTGIQLTFHLS >gi|304427119|gb|AEEM01000008.1| GENE 87 65497 - 65619 61 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAGYVIQGWCLTNLYLWQNRMEFHAVFLILWYNVRVPNY >gi|304427119|gb|AEEM01000008.1| GENE 88 66017 - 67477 1965 486 aa, chain + ## HITS:1 COG:SPy1653 KEGG:ns NR:ns ## COG: SPy1653 COG1488 # Protein_GI_number: 15675524 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 484 1 484 484 830 83.0 0 MYQDDSLTLHTDLYQINMMQVYFDQGIHNKNAVFEIFFRKEPFANGYAVFAGLQRMVEYL ENLHFTETDIAYLEDLGYPADFIAYLKDFKLELTIRSAKEGDLVFANEPIVQVEGPLAQC QLVETALLNIVNFQTLIATKAARICSVIDDEPLLEFGSRRAQELDAAIWGTRAAVIGGAN ATSNVRAGKMFDIPVSGTHAHALVQAYGDDYEAFMAYAGTHKDCVFLVDTYDTLRLGVPA AIRVANELGDKINFLGVRIDSGDMAYLSKKIRKQLDAAGYPNAKIYASNDLDENTILNLK MQKAKIDVWGVGTKLITAYDQPALGAVYKIVSMEDENGVMQDTIKLSNNAEKVSTPGKKQ VWRITSRERNKTEGDYITFTDTDVNKLDEVYMFHPTYTYINKTVKDFEAVPLLVDIFDKG KLVYNLPSLSEIQEYARKEFDKLWDEYKRLLNPQDYPVDLSQEVWQNKMDLIDRIRKEAQ QKGEVK >gi|304427119|gb|AEEM01000008.1| GENE 89 67474 - 68298 1134 274 aa, chain + ## HITS:1 COG:L0203 KEGG:ns NR:ns ## COG: L0203 COG0171 # Protein_GI_number: 15673084 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Lactococcus lactis # 1 274 1 274 274 453 82.0 1e-127 MTLQEKIIAELGVKPSIDPKEEIRVSVDFLKDYLKKHSFLKSYVLGISGGQDSSLAGRLA QIAVEELRAETGDDSYKFIAVRLPYGVQADEEDAQRALKFIQPDVSLAVNIKEGVDGQVR ELEKAGIDVSDFNKGNIKARQRMITQYAVAGANSGAVIGTDHAAENITGFFTKFGDGGAD IIPLYRLNKRQGKQLLAELGADPAIYEKIPTADLEENRPGIADEVALGVTYNDIDDYLEG KTVSSEAKEKIENWWRKTEHKRHLPITVFDDFWK >gi|304427119|gb|AEEM01000008.1| GENE 90 68517 - 69854 1733 445 aa, chain + ## HITS:1 COG:SPy1651 KEGG:ns NR:ns ## COG: SPy1651 COG3579 # Protein_GI_number: 15675522 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Streptococcus pyogenes M1 GAS # 1 443 1 443 445 739 82.0 0 MSELSSTFTDKLFADFQADSKLRAVENAVTHNGLLKSLETRQSEMENDHAFSIDLTKDKV ANQKASGRCWMFAALNTFRHKMISDLNLENFELSQAHTFFWDKYEKSNWFLEQVIATADQ ELGSRKVKFLLDVPQQDGGQWDMVVALFEKYGVVPKAAYPESISSSNSRELNQYLNKLLR QDAQILREAIAAGADDKAVQAKKEALLQEVFNFLAINLGLPPRTIDFAYRDKDNNYHSDK NITPQEFFKKYVGLDLSEYVSVINAPTADKPYGKSYTVEMLGNVVGSRDVRYLNLDMERF KELAIAQMQAGETVWFGSDVGQISDRQKGIMATNVYDFETAMDINFTQDKAGRLDYSESL MTHAMVLTGVDLDENGKSLKWKVENSWGDKVGNKGYFVASDAWMDEFTYQIVVRKEFLTA EERAAYEAEPIVLAPWDPMGALASK >gi|304427119|gb|AEEM01000008.1| GENE 91 69939 - 72167 2519 742 aa, chain - ## HITS:1 COG:SPy1649 KEGG:ns NR:ns ## COG: SPy1649 COG0744 # Protein_GI_number: 15675521 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 27 702 10 680 721 831 70.0 0 MITIKKKITRKRKKTNSTTSSRKATALKVLKYGLIAGLTLVIAAVLAGGSLFAYYVSSAP KLSESKLSSTNSSLIYDSSGNLIADLGSEKRESVTADNIPLNLVNAITSIEDKRFFKHRG IDVYRILGAAFNNFTSSSTQGGSTLDQQLIKLAYFSTSESDQTLKRKAQEAWLALQMERK YTKEEILTFYINKVYMGNGNYGMLTAAKSYYGKDLKDLSIAQLALLAGIPQAPSQYDPYT NPDAAQSRRDTVLAEMYEDGNITKDEYDTAVATPVTDGLQTLTETSSYDAYLDNYIKEVI EEVSDKTGQDIYSAGLKVYTNVDTDVQQYLWNVYNTDYYVSYPDSDLQVASTIIDVTNGN VIAQLGSRNQDTTVSLGTNQSVLTDRDWGSTMKPITDYAPAIENGIYTSTAATTSDSKYY WPGTSTQIYNWDRQYYGTMTIQTAIQQSRNVPAVKALEAVGLDAAKEFLEGLGIYYPQLY YSNAISSSTSDSDEKYGASSEKMAAAYAAFANGGIYYEPQYINKIEFNDGTTQTYSSSGT RAMKETTAYMMTSMLKTVLTYGTGTEAAISGVYQAGKTGTSNYSDDELEEIEESTGIYNS VVGTMAPDELFVGYTTQYSMAVWTGYKDRMTPIYGDGLNVAADVYKAMQSYLNEKYGSGS EDFTVPSGVYTSGSYVYLSGLSNNYTYSSTSSSVYSNIYGSSSSSSEEESTAESSSEDSS STESSNEADNNSDNSNTESSDE >gi|304427119|gb|AEEM01000008.1| GENE 92 72154 - 72762 482 202 aa, chain - ## HITS:1 COG:SPy1648 KEGG:ns NR:ns ## COG: SPy1648 COG3331 # Protein_GI_number: 15675520 # Func_class: R General function prediction only # Function: Penicillin-binding protein-related factor A, putative recombinase # Organism: Streptococcus pyogenes M1 GAS # 1 202 1 199 199 308 76.0 4e-84 MVNYPHHLIRKQAVPASKKVKKSSVNFANRGMSFEAAINETNNYYLSRNIAVIHKKPTPI QIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGRYIDFEAKETRQKTSMPLKNFHAHQI EHMANVLKQDGICFVLLHFSTLKETYFLPASALVDFYQINLGTKSMPLDYIRKNGYVVTT SSLPQVPYLDIIDQKILGGDHN >gi|304427119|gb|AEEM01000008.1| GENE 93 72837 - 73355 690 172 aa, chain + ## HITS:1 COG:L131937 KEGG:ns NR:ns ## COG: L131937 COG4474 # Protein_GI_number: 15672527 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 171 1 171 174 194 60.0 5e-50 MAAILVTGYKSFELGIFQDKDERISVIKKAIRHNLIRYFEEGIDWLIFMGNLGFEYWALQ VAKELQEEYEFSIATIFTFENHGQNWNEANQVKLDEFKQVDFVKYTYKSYENPSQFKNYN QFLVDNTEGAYLFYDTENETTLKYLLQVMQEKEDYPINFLTFDRLNEFLEEW >gi|304427119|gb|AEEM01000008.1| GENE 94 73482 - 73823 427 113 aa, chain + ## HITS:1 COG:SPy1646 KEGG:ns NR:ns ## COG: SPy1646 COG3599 # Protein_GI_number: 15675518 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Streptococcus pyogenes M1 GAS # 1 113 1 108 108 116 69.0 1e-26 MASIIYSPKDIFEQEFKTSMRGYDKKEVDEFLDDIIKDYESYISQVQELRAENEKLKQQL AAKPKAAPTPSYVGSHTVNAEQQTRVAQSATNIDILKRISRLEKEVFGKQITE >gi|304427119|gb|AEEM01000008.1| GENE 95 74453 - 75625 1294 390 aa, chain + ## HITS:1 COG:SPy1644 KEGG:ns NR:ns ## COG: SPy1644 COG0116 # Protein_GI_number: 15675517 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Streptococcus pyogenes M1 GAS # 1 381 1 381 384 685 85.0 0 MKKTFNLVATAAAGLEAVVGREIRDLGIDCQVENGKVRFQGDVRTIATTNLWLRAADRIK IVVGEFPARTFEELFQGVYKLDWENYLPLGAKFPISKAKCVKSKLHNEPSVQAISKKAVV KKLQKIYHRPEGVPLQENGAEFRIEVSILKDKATVMIDTTGASLFKRGYRVEKGGAPIKE NMAAAIIELSNWYPDKPFIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWNWVDDDLV QQVRDEAEEKANYDIELDISGFDIDGRMIDIAKKNAEEAGLADVIKLKQMRLQDLKTDKI NGVIVSNPPYGERLLDDKAVDILYNEMGQTFSPLKTWSKFILTSDEQFERKYGSQADKKR KLYNGTLRVDLYQFYGERVKRSVAALAQEK >gi|304427119|gb|AEEM01000008.1| GENE 96 75684 - 77210 1842 508 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0484 NR:ns ## KEGG: GALLO_0484 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 24 508 1 485 485 654 98.0 0 MSDKKELPSSEEQEGLNLEDVKNMTIGEAVRKDSELKAGVTESDGVLDKYIKQHRDEVTS QKFEAKLSDFDDLDTKALDNFIKKQREELVNNGIVGESALKENEATPRAVDFEAEKIEDT QETSQEVPVSENGASENDSTIQQENVSIEIPNANSAVSEPTPEAASAVVADDKNSEAIAL ETADEQPTYKNKRVIIGGLAALVVAIFGVAYGLNYTRESSTSVASSSTSTTKKSTSSSSS AAAKKAKTAFDDAYAAFFTDDTKTKLKNSEFDNISSLKEKLDDLKDTDYYDDAKKEYDTL AAQITAIQTINALFESNVIVNGEKASATVKSDANFDNLSSDLLNTGNANLDTLLQSAITD GKNQLATLASSSSQEASASTSSQTESASSSDTSTTQTVSGASGYGITSYDASTLQRSLSR VPYSDSAIADSSNSAWTFADGVLDKIVATSQSRGYFSGNDYILEKVNIINGNGYYNMFKA DGTYLFSINCKTGYFVGNASGNSDALDY >gi|304427119|gb|AEEM01000008.1| GENE 97 77357 - 78121 215 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 249 4 238 242 87 28 3e-16 MVKVAIVTGAGQGIGFAIAKRLHEDGFKVGVLDYNQETAEKAVQEISPADTFAVVADVSK RDEVAKAFAKVVEHFGDLSVVVNNAGVAPTTPLDTITEEVFERTFAINVGGTIWGAQAAL AEFKKLGHGGKIINATSQAGVVGNPNLTVYGGSKFAVRGITQTLARDLAKDGITVNAYAP GIVKTPMMFDIAHEVGKNAGKDDEWGMQTFAKDITLKRLSEPEDVAKAVSFLAGPDSDYI TGQTIIVDGGMQFH >gi|304427119|gb|AEEM01000008.1| GENE 98 78203 - 78688 650 161 aa, chain - ## HITS:1 COG:SPy1642 KEGG:ns NR:ns ## COG: SPy1642 COG1854 # Protein_GI_number: 15675515 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Streptococcus pyogenes M1 GAS # 4 161 3 160 160 284 84.0 4e-77 MSKKEVTVESFELDHTIVKAPYVRLISEEAGPLGDVISNFDIRLVQPNENAIPTAGLHTI EHLLAKLIRERIDGMIDCSPFGCRTGFHLIMWGKHNTTEIAKVIKSSLEEIANVTSWEDV PGTTIESCGNYKDHSLFTAKEWAKLILKDGISDDPFERHVI >gi|304427119|gb|AEEM01000008.1| GENE 99 78839 - 80446 2223 535 aa, chain + ## HITS:1 COG:SPy1633 KEGG:ns NR:ns ## COG: SPy1633 COG1418 # Protein_GI_number: 15675508 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 535 1 535 535 758 85.0 0 MPNIIILIVFALIGLIVGYVLISVRLKSAKEAAELTLLNAEQDAVNLRGQAELEAENIRK TAERESKSHRKELLIEAKEEARKYREEIEKEFKSERQELKQMETRLTERASSLDRKDENL TSKEKVLDSKEQSLTDKSRHINEREKQIGELEEQKKAELERVALMTIAEAREIILTETET NLTHEIATRIKDAEREVRDKSSKLAKNILAQAMQRMAGEYVTEQTITTVHLPDDSMKGRI IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE ELVEKNRLEMDNRIREYGEAAAFEIGALNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK MAGILAGELGENVTLARRAGFLHDMGKAVDREVEGSHVEIGTELARKYKENPIVVNAIAS HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSYALQ AGREIRIMVQPTKVSDDEVTILAHKVREKIEGNLDYPGNIKVTVIRELRAVDYAK >gi|304427119|gb|AEEM01000008.1| GENE 100 80699 - 81316 984 205 aa, chain + ## HITS:1 COG:SPy1632 KEGG:ns NR:ns ## COG: SPy1632 COG0194 # Protein_GI_number: 15675507 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 202 1 202 211 352 93.0 2e-97 MTERGLLIVFSGPSGVGKGTVRQEIFSTPDHKFEYSVSMTTRQKRPGEVDGVDYFFRTRE EFEELIKNGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKKKVPDGVF IFLTPPDLDELKDRLVGRGTDSEEVIRQRIERAKEEIALMREYDYAVVNDEVPLAAERVK RIIEAEHFRVDRVIGRYNDMIKDID >gi|304427119|gb|AEEM01000008.1| GENE 101 81340 - 81654 559 104 aa, chain + ## HITS:1 COG:SPy1630 KEGG:ns NR:ns ## COG: SPy1630 COG1758 # Protein_GI_number: 15675506 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Streptococcus pyogenes M1 GAS # 2 95 1 94 104 113 92.0 8e-26 MMLKPSIDTLLDKVPSKYSLCILQAKRAHELEAGAKPTQEFKSVKATLQALEEIESGNVV IHPDPEAKRAAVLARIEAERLAKEEEERKIKEQIAKEKEEGEKI >gi|304427119|gb|AEEM01000008.1| GENE 102 81776 - 84166 2223 796 aa, chain + ## HITS:1 COG:SPy1629 KEGG:ns NR:ns ## COG: SPy1629 COG1198 # Protein_GI_number: 15675505 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Streptococcus pyogenes M1 GAS # 1 796 1 794 794 1172 72.0 0 MVKIAQVIVDVPLMQTDKPFSYIIPKDVEDQVTIGSRVHVPFGRGNRLLQGFVVGFSDTF DNTVTDLKAISEVLDFEPVLNAEQLELAEQMRHTVFSYKISILKSMIPNLLNSQYDKRLT PTESLSSEEHLALFGEKESRLHSSLTEEEAKKVARLVQAGKITVDYLAKDKKNIKTEKYY HVQAEKIAAADISNRTKKRLELRDYLLEHPEEGKLSDLHHLFSRDVVKFFVDNQLITVLE REKKRSDAYFDVATTDFLDLNAEQAAVVEQVTSQIGQESKPFLLEGVTGSGKTEVYLHII DKVLKLGKTAIVLVPEISLTPQMTNRFISRFGKQVAIMHSALSDGEKFDEWRKIKSGQAR VVVGARSAIFVPIENIGAIIIDEEHEATYKQESNPRYHARDVALLRAKYHKAVLLMGSAT PSIESRARASRGVYQFLQLTHRANPMAKIPKVEIVDFRDYVGQQEVSNFTPYLLEKIADR LEKNEQVVLMLNRRGYSSFIMCRDCGYVDECPNCDISLTLHMDTKTMNCHYCGFEKSIPH TCPNCHSRSIRYYGTGTQKAYDELVEVFPQARILRMDVDTTRQKGAHQRILDKFGNHEAD ILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSERTFQLLTQVAGRAGRAEKEGEV LIQTYNPQHYAIQLAQKQDYEAFYAYEMGIRRQLAYPPYYFTVGLTLSHKDEQTVVRKSF ELLQLLRQQLSDKIKILGPTPKPIARTHNLYHYQIIVKYRFEDNLENVLNQILDLTQLPE NKNLRLVIDYEPQNFM >gi|304427119|gb|AEEM01000008.1| GENE 103 84212 - 85162 1119 316 aa, chain + ## HITS:1 COG:SPy1628 KEGG:ns NR:ns ## COG: SPy1628 COG0223 # Protein_GI_number: 15675504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Streptococcus pyogenes M1 GAS # 6 315 1 310 311 476 72.0 1e-134 MKGTEMTKLIFMGTPDFSAAVLNGLLDDSNYDVLAVVTQPDRAVGRKKEIKMTPVKEVAL AHNLPVYQPEKMSGSEEMAELMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKY RGGAPIHYAIINGEEEAGVTIMEMVKKMDAGDMIAKASTPITDDDNVGTMFEKLAVIGRD LLLRTLPDYIAGNIKPEPQDESKATFSPNITPEEERIDWNKSARDVFNHIRGLYPWPVAH TLLDGKRFKIYEATLAEGHGRPGEIIEKGKKSLVVATGDGAISLKTVQPAGKPRMSVVDF LNGVGRKLEVGDLIGE >gi|304427119|gb|AEEM01000008.1| GENE 104 85152 - 86474 1321 440 aa, chain + ## HITS:1 COG:SPy1627 KEGG:ns NR:ns ## COG: SPy1627 COG0144 # Protein_GI_number: 15675503 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pyogenes M1 GAS # 1 440 1 440 440 688 75.0 0 MANDWKNQARGLALLVLENVFEDGAYSNIALNQELSHTTLSPKDKSLVTEIVYGTVARKI TLEWYLAHYIKDRDKLDSWVYYLLMLSLYQLLYLDKIPAHAVVNDAVNIAKNRGNKKGAE KFVNAVLRRFTKEELPNPETIKRKNKRYSVLYSLPVWLVKKLIDQFGEERAAAIMQSLFV RNKASIRVTDPDKLAEIKAATGAEQSILSPVGLVKTSGHFAGTDYFANGDITIQDESSQL VAPTLDIQGNEDILDACAAPGGKTTHMASYLKKGHITALDLYDHKLTLVMDNAKRLHVAD KISTQKMDATTVHEHFAPDSFDKILVDAPCSGIGLIRRKPDVKYNKENQDFSALQEIQLQ ILDSVCQTLRKGGIITYSTCTIFDEENFQVIHKFLETHPNFEQVKLSHTQEDIVRDGCIA ITPEQYQTDGFFIGQVKRIL >gi|304427119|gb|AEEM01000008.1| GENE 105 86512 - 87249 822 245 aa, chain + ## HITS:1 COG:SPy1626 KEGG:ns NR:ns ## COG: SPy1626 COG0631 # Protein_GI_number: 15675502 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 244 1 244 246 365 78.0 1e-101 MKISLVTDIGQKRSNNQDFINKFDNKNGITLVILADGMGGHRAGNIASEMTVTDLGREWI NTDYTELSQIRDWLLVTLEAENRKVYELGQTDEYKGMGTTVEALAIVDNNVIYAHVGDSR IGLLHQGEYRLLTSDHSLVNELVKAGQLTEEEAANHPQKNIITQSIGQANPVEPDLGVQV LEENDYLIINSDGLTNMITNDEIVSILSQDKNLDDKNNELVTLANERGGLDNITIALIHA ESEEA >gi|304427119|gb|AEEM01000008.1| GENE 106 87249 - 89126 1929 625 aa, chain + ## HITS:1 COG:SPy1625_1 KEGG:ns NR:ns ## COG: SPy1625_1 COG0515 # Protein_GI_number: 15675501 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pyogenes M1 GAS # 1 344 1 345 345 544 82.0 1e-154 MIQIGKLFAGRYRILKSIGRGGMADVYLAKDLILDNEEVAIKVLRTNYQTDQIAVARFQR EARAMAELNHPNIVSIRDIGEEDGQQFLVMEYVDGSDLKKYIQDHAPLSNNEVVRIMEEV LSAMTLAHQQGIVHRDLKPQNILLTKDGTVKVTDFGIAVAFAETSLTQTNSMLGSVHYLS PEQARGSKATVQSDIYAMGIMLFEMLTGHIPYDGDSAVTIALQHFQKPLPSIIDENKNVP QALENVVIKATAKRLSDRYASTFEMSRDLMTALSYNRSREPKLVFEDTENTKTLPKVTTS TSVPSTTEQLLKKQKAAKEDKAATENKATKAKTKKKKSRRMFGTLMKIFFAVVIVAIAIF TYLTLTSPSTVSVPDVAGSSLSEAKTTIKSSGLKVGTVHKVSSDTVESGYVIKTSPTAGS SKKEGSSIDIYVSKGSSGFKIKDYTGQDYQTAVKDLVNDYGVSESQIEIEEVSTSDYDEG VIISQTPSEGETFKVSGDDKITFKVAAESTVTMPNLTGYTYSEAIAALTALGVSSSHITV YQADPNSSTGYVQVSSPSSTATVTAQTPYYGDTLSGNVVLYLAADEEESSQAPSSSSSES SESKESSSSSSSTDDSSSSTETSDE >gi|304427119|gb|AEEM01000008.1| GENE 107 89237 - 89932 611 231 aa, chain + ## HITS:1 COG:SPy1623 KEGG:ns NR:ns ## COG: SPy1623 COG4758 # Protein_GI_number: 15675500 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 209 18 226 228 243 66.0 2e-64 MRKVQFFVIVETILIVMGLMTIMANNLSSFILILVLILLALRFYNQDKRNNFLLTIGLVL LFLIFMLNPYIIMAVVLGVVYVVINHFSQVKKKNRYALVRFREEELKAKPVRNQWIGMDT HDSDFYAFDDINIIRLTGSDTIDLSNVIITGKDNVVVIRKVFGPTKILVPIDVAVKLDVS AIYGSVRYFDFEEYDLRNESLKLWHSEDEEYLKAVKIIVSTLAGDVEVVRK >gi|304427119|gb|AEEM01000008.1| GENE 108 89929 - 90954 908 341 aa, chain + ## HITS:1 COG:SPy1622 KEGG:ns NR:ns ## COG: SPy1622 COG4585 # Protein_GI_number: 15675499 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 334 1 334 334 398 69.0 1e-111 MKKHHFILFILYASIIIISIVIVVLDSLNLHLKNLITDFWMGEQFVFSIVFLILAVTILL LLLWVILDDNSKRGINQNLRRILNNQPITLDEDTEINTNLSRLSKKMTHLTNSLQNTENS RILNSQEIVEQERKRIARDLHDTVSQELFASSMILSGVSANLDQIEKEQLEFQLTAVESM LQNAQKDLRILLLHLRPTELENKTLSEGFDILLKELTDKSSIEVVYKKNIGQLPKKIEDN VFRIAQEFISNTLKHAKASRLEVYLNQTETELQLKMVDNGVGFDMDESHDLSYGISNIEE RVDDMAGTVTLLSQKGKGVSMDIRLPLVKGGNEEKEDDPEN >gi|304427119|gb|AEEM01000008.1| GENE 109 90938 - 91582 840 214 aa, chain + ## HITS:1 COG:SPy1621 KEGG:ns NR:ns ## COG: SPy1621 COG2197 # Protein_GI_number: 15675498 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 4 213 3 212 213 328 85.0 3e-90 MTQKIKVILVDDHEMVRLGLKSFLNLQPDVEVVGEAGNGLDGINLALELKPDVVVMDLVM PEMSGVEATLKLLEEWKEAKILVLTSYLDNEKIYPVIEAGAKGYMLKTSSAAEILNAIQK VARGELAIETEVDKKIKAHDMQPELHEDLTARERDILRLLAKGYDNQTIADELFISLKTV KTHVSNILAKLEVDDRTQAVVYAFKHHLVPQDDE >gi|304427119|gb|AEEM01000008.1| GENE 110 91701 - 93101 1596 466 aa, chain + ## HITS:1 COG:SP1538_2 KEGG:ns NR:ns ## COG: SP1538_2 COG0652 # Protein_GI_number: 15901382 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Streptococcus pneumoniae TIGR4 # 269 466 1 198 198 323 80.0 4e-88 MDVKTKYKAKKTKIVFFDIDDTLRVKATAYMPESIKYVFKSLKEKGIMTGIATGRALYGV VPEIRALEPDYFVTINGTYVIDKKATEIVNDPLPRDIVEKYVAWAKSEGIEYGFAGKDKP VVSARCDLIDDAMVPIYGVCDVEPDFYLTNDVYHMWTFTENNAQLQLPDELAAEIRLVPW HEHSSDVVKNGISKASGVAHVLESQNLKPINAMMFGDGPNDMEIFDYVGLKIAMGNAVPE LKEKADFVTKTVEEDGILYALEELGLVEKQLNFPQVDLTTVEGPVATIKTNHGDMKIQLF PEHAPKTVANFIALSKDGYYDGIIFHRIIPEFMIQGGDPTGTGMGGQSIYGDSFEDEFSE ELYNVRGALSMANAGPNTNGSQFFIVQNSKIPYAQKELERGGWPKPIAEFYATNGGTPHL DRRHTVFGQIMDDDSYKVLDEIANVETGAQDRPVEDVVIETIEVVD >gi|304427119|gb|AEEM01000008.1| GENE 111 93101 - 93457 459 118 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55820707|ref|YP_139149.1| hypothetical protein stu0628 [Streptococcus thermophilus LMG 18311] # 1 118 1 118 121 181 74 1e-44 MRIGDKITGTITGIKPYGAFVALDNGTTGLIHISEIKTGYIENIYQLLSVGEKVLVQVVD FDEFTQKASLSLRTLEEEKHHLHRRHRFSNSHLNIGFQPLADNLPKWTKESLELLTKE >gi|304427119|gb|AEEM01000008.1| GENE 112 93571 - 94500 1274 309 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 307 3 306 308 495 80 1e-139 MSKIYNSITELIGNTPIVKLNNIVPEDAADVYVKIEAFNPGSSVKDRIALRMIEDAEKAG TIKPGDIIVEPTSGNTGIGLAWVGAAKGYKVIIVMPETMSVERRKIIQAYGTELVLTPGS EGMKGAIAKAKEIAEEKNGWVPLQFANPSNPAVHEDTTGAEIIEAFGPTGLDAFVSGVGT GGTVSGVSHALKKANPNVQVYAVEADESAVLSGEKPGPHKIQGISAGFIPDTLDTKAYDG VIRVASDDAVITSRNLGGKEGFLAGISSGAAIYAAIEKAKELGKGKKVLALLPDNGERYL STSLYDFND >gi|304427119|gb|AEEM01000008.1| GENE 113 94604 - 95230 682 208 aa, chain - ## HITS:1 COG:SP2209 KEGG:ns NR:ns ## COG: SP2209 COG1739 # Protein_GI_number: 15902016 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 208 1 208 211 260 63.0 1e-69 MNYKTIKNDGIFEEEIKKSRFICQLKRVDTEEEGRQFIAQIKKEHYKATHSCSAMIIGEH AEIKRSSDDGEPSGTAGVPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVAN ALKEIGLVEVKEQEGLKITLSYPQYQAFTNFLQAENLQEFDTEFLENVTTYIYLDPDNVK EVSGRLIEFYQGKVDFTKSGSKIVEVPL >gi|304427119|gb|AEEM01000008.1| GENE 114 95287 - 96588 682 433 aa, chain + ## HITS:1 COG:SP2208 KEGG:ns NR:ns ## COG: SP2208 COG4098 # Protein_GI_number: 15902015 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) # Organism: Streptococcus pneumoniae TIGR4 # 6 432 6 432 432 543 60.0 1e-154 MDKLDNYYGRLFTQAQLSDALKKQAKQLPAMTKLNHHYVCNRCGSQVSLQNKLQTNVFYC RNCLVFGRNTSNGHLYYFPQKRFSKKASLIWKGKLTPYQDDVSKGMLEGIDAKKDLLIHA VTGAGKTEMIYQSVSKIIDDGGCVCLASPRIDVCLELYKRLSRDFSCPITLLHGDSEPYK RAPLIIATTHQLLKFYQAFDLLIIDEVDAFPFVDNAVLYHAVDKAIKPNGTKIFLTATST DELDKKVKTGTLTKLHLARRFHANPLVVPQKIWLSGVLSNMQKKKIPQKLINLLKKQRQT CYPLLIFFPNIEQGEAFTQILQTYFPEEQIAFVSSKTENRLEIVEKFRKQELSILVTTTI LERGVTFPCVDVFVVLANHRLYTKSALVQISGRVGRAAERPTGELLFLHDGSTKEMRKAI AEIKAMNKKGGFA >gi|304427119|gb|AEEM01000008.1| GENE 115 96828 - 97247 180 139 aa, chain + ## HITS:1 COG:SP2207 KEGG:ns NR:ns ## COG: SP2207 COG1040 # Protein_GI_number: 15902014 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 139 82 220 220 144 53.0 5e-35 MKDYFSKYKFQGDILLSHVFSKELKQALKKYKNYTFVPVPISPKRLKERQFNQVTALLQA AKISYEDLLIKREISKQSDKTRKERLETLNPFSLKNVSKVPENVLIIDDIYTTGATLKGI YQLFYENGAKNVKSFTIVR >gi|304427119|gb|AEEM01000008.1| GENE 116 97323 - 97871 770 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225868030|ref|YP_002743978.1| sigma 54 modulation protein / S30EA ribosomal protein [Streptococcus equi subsp. zooepidemicus] # 1 182 1 182 182 301 84 1e-80 MIKYSIRGENIEVTDAIRNYVESKLGKIEKYFHAEQGLDARVNLKVYREKTAKVEVTILV DSITLRAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKLPASQIFTSEFEAEPVE EGPVVKVVRTKHVSLKPMDIDEALLQMDLLGHDFFIYTDAEDGVTNVLYRREDGELGLIE AK >gi|304427119|gb|AEEM01000008.1| GENE 117 97927 - 98085 62 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIADKFAAQLTAIIAYHFMTYFVNIFFGIFQTLRNKNLSQCLKLTLKNADYH Prediction of potential genes in microbial genomes Time: Sun May 29 12:21:43 2011 Seq name: gi|304427071|gb|AEEM01000009.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00019, whole genome shotgun sequence Length of sequence - 44720 bp Number of predicted genes - 47, with homology - 46 Number of transcription units - 23, operones - 12 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 22 - 95 89.3 # Ile GAT 0 0 + TRNA 106 - 177 64.7 # Glu TTC 0 0 - Term 784 - 815 2.1 2 2 Op 1 2/0.500 - CDS 825 - 1358 379 ## COG3557 Uncharacterized domain/protein associated with RNAses G and E - Prom 1383 - 1442 4.5 3 2 Op 2 . - CDS 1445 - 2221 745 ## COG2137 Uncharacterized protein conserved in bacteria - Prom 2247 - 2306 5.3 + Prom 2196 - 2255 8.8 4 3 Op 1 . + CDS 2293 - 3237 712 ## GALLO_0508 hypothetical protein 5 3 Op 2 . + CDS 3237 - 4589 1440 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 4719 - 4778 5.4 6 3 Op 3 . + CDS 4809 - 5381 481 ## COG1247 Sortase and related acyltransferases + Term 5526 - 5593 31.1 + TRNA 5508 - 5578 55.2 # Thr GGT 0 0 - Term 5490 - 5560 13.1 7 4 Op 1 . - CDS 5623 - 5943 206 ## GALLO_0517 putative transporter 8 4 Op 2 . - CDS 5774 - 6331 465 ## GALLO_0517 putative transporter 9 4 Op 3 . - CDS 6338 - 6976 734 ## COG1428 Deoxynucleoside kinases - Prom 7188 - 7247 6.7 10 5 Op 1 . - CDS 7359 - 7865 674 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 11 5 Op 2 . - CDS 7911 - 8678 527 ## SAK_0495 hypothetical protein - Prom 8710 - 8769 5.3 + Prom 8667 - 8726 6.4 12 6 Op 1 . + CDS 8895 - 9149 439 ## SSU98_0443 galactose mutarotase-like protein 13 6 Op 2 . + CDS 9151 - 9468 429 ## GALLO_0524 hypothetical protein + Term 9665 - 9704 8.2 + Prom 9471 - 9530 3.5 14 7 Op 1 . + CDS 9720 - 10298 685 ## PROTEIN SUPPORTED gi|125718620|ref|YP_001035753.1| ribosomal protein N-acetylase 15 7 Op 2 . + CDS 10295 - 11590 417 ## SMU.1262c hypothetical protein 16 7 Op 3 . + CDS 11611 - 14262 3396 ## COG0525 Valyl-tRNA synthetase + Term 14283 - 14325 10.1 - Term 14272 - 14312 5.1 17 8 Op 1 . - CDS 14324 - 14530 252 ## COG1476 Predicted transcriptional regulators 18 8 Op 2 . - CDS 14537 - 14839 165 ## gi|171778746|ref|ZP_02919842.1| hypothetical protein STRINF_00694 - Prom 14869 - 14928 8.2 + Prom 14890 - 14949 6.3 19 9 Tu 1 . + CDS 15012 - 16058 892 ## COG2315 Uncharacterized protein conserved in bacteria + Term 16062 - 16092 -0.9 + Prom 16091 - 16150 6.9 20 10 Tu 1 . + CDS 16174 - 17388 734 ## COG0477 Permeases of the major facilitator superfamily + Term 17390 - 17432 1.5 - Term 17562 - 17596 5.5 21 11 Tu 1 . - CDS 17613 - 18161 436 ## COG1309 Transcriptional regulator - Prom 18197 - 18256 4.3 + Prom 18197 - 18256 5.7 22 12 Tu 1 . + CDS 18297 - 19091 549 ## GALLO_0533 hypothetical protein + Term 19154 - 19196 -0.2 + Prom 19185 - 19244 9.0 23 13 Tu 1 . + CDS 19439 - 20431 1421 ## COG2502 Asparagine synthetase A + Term 20460 - 20504 8.3 24 14 Tu 1 . - CDS 20565 - 21317 952 ## GALLO_0535 conserved hypothetical secreted protein - Prom 21360 - 21419 9.6 - Term 21440 - 21475 4.2 25 15 Tu 1 . - CDS 21489 - 22331 1015 ## GALLO_0536 conserved hypothetical secreted protein - Prom 22374 - 22433 5.8 + Prom 22371 - 22430 7.6 26 16 Op 1 14/0.000 + CDS 22457 - 23005 410 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 27 16 Op 2 4/0.500 + CDS 23038 - 23535 315 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 28 16 Op 3 . + CDS 23513 - 24598 431 ## PROTEIN SUPPORTED gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 + Term 24607 - 24640 3.1 + Prom 24626 - 24685 5.2 29 17 Tu 1 . + CDS 24727 - 24981 245 ## GALLO_0540 hypothetical protein + Term 24987 - 25034 4.6 + Prom 25031 - 25090 8.9 30 18 Tu 1 . + CDS 25165 - 25824 1115 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 25836 - 25871 4.4 + Prom 25848 - 25907 5.6 31 19 Tu 1 . + CDS 25963 - 26472 484 ## GALLO_0542 hypothetical secreted protein + Term 26482 - 26526 5.2 + Prom 26496 - 26555 5.8 32 20 Op 1 2/0.500 + CDS 26584 - 27909 1051 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 33 20 Op 2 3/0.500 + CDS 27941 - 28519 679 ## COG4470 Uncharacterized protein conserved in bacteria 34 20 Op 3 1/0.500 + CDS 28541 - 29647 1262 ## COG0820 Predicted Fe-S-cluster redox enzyme 35 20 Op 4 . + CDS 29650 - 30168 254 ## COG4767 Glycopeptide antibiotics resistance protein + Term 30171 - 30234 13.4 + Prom 30173 - 30232 3.6 36 21 Op 1 35/0.000 + CDS 30343 - 32088 195 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 37 21 Op 2 1/0.500 + CDS 32078 - 33823 220 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 + Term 33842 - 33868 0.3 + Prom 34064 - 34123 6.8 38 22 Op 1 45/0.000 + CDS 34163 - 35041 680 ## COG1131 ABC-type multidrug transport system, ATPase component 39 22 Op 2 6/0.500 + CDS 35038 - 35769 697 ## COG0842 ABC-type multidrug transport system, permease component 40 22 Op 3 19/0.000 + CDS 35769 - 36857 676 ## COG4585 Signal transduction histidine kinase 41 22 Op 4 . + CDS 36859 - 37455 604 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 37524 - 37565 0.2 + Prom 37542 - 37601 8.0 42 23 Op 1 2/0.500 + CDS 37635 - 37928 419 ## COG4842 Uncharacterized protein conserved in bacteria + Term 37947 - 37989 10.2 43 23 Op 2 . + CDS 38002 - 41091 3418 ## COG1511 Predicted membrane protein 44 23 Op 3 . + CDS 41094 - 41573 266 ## 45 23 Op 4 . + CDS 41573 - 41815 243 ## SGO_0062 hypothetical protein 46 23 Op 5 4/0.500 + CDS 41815 - 43059 1348 ## COG4499 Predicted membrane protein 47 23 Op 6 . + CDS 43074 - 44718 1370 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins Predicted protein(s) >gi|304427071|gb|AEEM01000009.1| GENE 1 455 - 766 404 103 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0505 NR:ns ## KEGG: GALLO_0505 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 103 1 103 103 193 100.0 2e-48 MAFEKTKERYASFGVATSLPHEIIDTFWDLLDHYLKNVVPLDPILTFRLANNHNNVTFEY HDSKRKIFIGFDYNFPFDPFFPEIVHIIDQAGVETLLLPHELD >gi|304427071|gb|AEEM01000009.1| GENE 2 825 - 1358 379 177 aa, chain - ## HITS:1 COG:SPy1608 KEGG:ns NR:ns ## COG: SPy1608 COG3557 # Protein_GI_number: 15675490 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Uncharacterized domain/protein associated with RNAses G and E # Organism: Streptococcus pyogenes M1 GAS # 1 177 1 177 177 323 91.0 1e-88 MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTDNAVIGVNDHTLVTEGDGRRWVTREP AILYFHKKYWFNIIAMIRDNGVSYYCNLASPYVMDEEALKYIDYDLDVKVFADGEKRLLD VDEYELHKQEMGYSPDIDFILKENVKILVDWINNGKGPFSQAYINIWYKRYLELKNR >gi|304427071|gb|AEEM01000009.1| GENE 3 1445 - 2221 745 258 aa, chain - ## HITS:1 COG:SP1902 KEGG:ns NR:ns ## COG: SP1902 COG2137 # Protein_GI_number: 15901729 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 258 1 258 258 265 60.0 8e-71 MKITKIEKKKRLYLLEIDADDKLYVTEDTIVHFMLSKNMEIDEATLKDIQKFAQFSYGKN LALYHISFKQRTAAEVKKYLEQHDIDSLYIPEILENLKKENWINDEQYVETYLSQNLNTG DKGAYVLKQKLIQKGINSQLIDQKLANLDFSPLSEKVAQKLLRKYQHKLSTKTLKDKIIQ NMMNKGFSYSEAKIAFENLEVEKDNEQEFELLYKELDKQYRKYSKKYDGYELKQRLTQSL ARKGFSFDDIASALRDYL >gi|304427071|gb|AEEM01000009.1| GENE 4 2293 - 3237 712 314 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0508 NR:ns ## KEGG: GALLO_0508 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 314 2 315 315 525 98.0 1e-147 MKGDKNKIIDWETILQKKELSELAGEDFWDLDDFMFDDDVLDFAGKRDEQVVPRDVRLSD DLYFDIKALEEMLDSLAGNSEQMSFAFFSEKLRLASLYKVNGLYQKALTQFEELNKCDEN GDHGCHYEIVSLYILMSDYASAKAFCENCVSYEHDYLLQTLLLIGAILADDDFTAHELLK RLFDEVEGFEDFCLRSDLSLSKVLAEDDSGLKLEYAENDIEVVYAAFHLVLPLVERAASY LSGYLSSYCLDTVMDILLDELDFLTTAQLDVFEENGIYSINDFKVWSEEEILDLPKIGKV TIENLKDIGVIFSH >gi|304427071|gb|AEEM01000009.1| GENE 5 3237 - 4589 1440 450 aa, chain + ## HITS:1 COG:SPy1606 KEGG:ns NR:ns ## COG: SPy1606 COG2265 # Protein_GI_number: 15675488 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 450 1 450 451 707 74.0 0 MNLKVKQKIPLKIKRMGINGEGIGFYKKTLVFVPGALKGEDIFCQITAVKRNFAQARLIT INKKSKFRVEPACPIYRKCGGCQIMHLRYDKQLEFKDDLIAQSLKKFKPAGYENYDIRHT LGMEVPYHYRAKLQFQTRSFKGSVKAGLFEEGSHRLVDIRDCLVQDELTQAIINRVTELL EKHHIPIYDERKIAGVRTVMIRKAIATNQVQLIFITSRDVFLAPVIKQLTAEFDMIKGIA VNVNRSKSSEIYGEKTEVIWGNADISEEVLDYQFSLSPRAFYQLNPQQTEVLYGQAVAAL DVSENDHVIDAYCGVGTIGFAFAAKVKSVRGMDIIPEAIADAKKNAQRMGFENTHYEAGR AEDIIPKWYKEGYRADALIVDPPRTGLDDKLLNTILKYQPAKMVYVSCNTATLARDLVKL SKVYDVHYIQSVDMFPHTARTEAVVKLVRK >gi|304427071|gb|AEEM01000009.1| GENE 6 4809 - 5381 481 190 aa, chain + ## HITS:1 COG:L19745 KEGG:ns NR:ns ## COG: L19745 COG1247 # Protein_GI_number: 15673759 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Lactococcus lactis # 6 174 4 165 187 140 44.0 2e-33 MTVIIRLARLEDAKDLLAIYRYYVEKTAITFEYEVPSLEEFQERMRSIMAFYPYLVAEEA GQILGYAYASSFHPRAAYAWSAEATVYLDKAARGKGVGRQIYRALEEYLIKMGILNLNAC IASTETEDAYLTNGSEKFHRALGYQLVGKFHQSGYKFNHWYDMIWMEKMLGEHDNHVKPV KSIHEVTQKA >gi|304427071|gb|AEEM01000009.1| GENE 7 5623 - 5943 206 106 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0517 NR:ns ## KEGG: GALLO_0517 # Name: not_defined # Def: putative transporter # Organism: S.gallolyticus # Pathway: not_defined # 4 106 93 195 195 177 100.0 8e-44 MSIKKFGAKDVFLAIFFWTIGLGFLSYWMGGQKIVLDALTNGLSFTAQQRQVKGHLDGYY IWLLVDFLSFMLFISIGNQIVAFSYLGMFAQGLVGIMIWKKGKGQA >gi|304427071|gb|AEEM01000009.1| GENE 8 5774 - 6331 465 185 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0517 NR:ns ## KEGG: GALLO_0517 # Name: not_defined # Def: putative transporter # Organism: S.gallolyticus # Pathway: not_defined # 41 134 1 94 195 185 98.0 7e-46 MKKQLSLKNSFNLAWNRLNTKEKLFVIIAFLASLSFTLYGMLPTLVTGDFTALNTLSIIM SIFGFIGTWTLALQWQHTFKANGIQNIAGILVAGMQGIYGDMFTSFYYLVTEFIGHYSWK KRRNDNGELVVDKKIRSQRRLSRYLLLDNWTWLSVLLDGWTKNCPRCFDKRTIIHRPTTT SKRAP >gi|304427071|gb|AEEM01000009.1| GENE 9 6338 - 6976 734 212 aa, chain - ## HITS:1 COG:lin1817 KEGG:ns NR:ns ## COG: lin1817 COG1428 # Protein_GI_number: 16800884 # Func_class: F Nucleotide transport and metabolism # Function: Deoxynucleoside kinases # Organism: Listeria innocua # 1 206 8 213 214 224 55.0 9e-59 MIILAGMIGVGKTTYTSLLAKELGTTAFFEPVDNNPILDKYYEAPEKYGFALQIYFLNKR FKAIKKAYDTDNNVLDRSIYEDALFTYINTLQGSISEQEYKIYLELLDNMMEEIDGLPKK SPDLLIYLEGSFDHIMNNIKKRGRDFEQPDNANGLTDYYKLLHTHYNSWYENYQYSPKMK INTDHIDVTKSEDWAKVYQMIRQEMKSIGIGD >gi|304427071|gb|AEEM01000009.1| GENE 10 7359 - 7865 674 168 aa, chain - ## HITS:1 COG:all4397 KEGG:ns NR:ns ## COG: all4397 COG0454 # Protein_GI_number: 17231889 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Nostoc sp. PCC 7120 # 21 143 33 160 182 83 31.0 2e-16 MDIQFKSFTDEDTAQAIAIWNQVVTDGVAFPQTESLTFETGKAFFKAQTYTGVAYQADTG QIVGLYILHPNNVGRCGHICNTSYVVDSHFRGQHIGEKLVRHSMVTAKKLGFRILQFNAV VKSNQAALALYQKLGFHQLGTIPAGFLNKNNEYEDIIPHYYDLTKLPD >gi|304427071|gb|AEEM01000009.1| GENE 11 7911 - 8678 527 255 aa, chain - ## HITS:1 COG:no KEGG:SAK_0495 NR:ns ## KEGG: SAK_0495 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_A909 # Pathway: not_defined # 1 254 1 254 254 366 70.0 1e-100 MILSQFDHQQTAIINPGDVIQALPDFPKTAVTCFARGTFARILAEFPHREIAKTSVANLE IPIYELNFQGQKIAFFNSYVGASGCVAILEDIIAMGAENILVFGTCGVLDSSIKETSIII PTSAIRDEGTSYHYAPPASEIALNHTYRKQFKQFLDAQNISYTEGKVWTTDGIYRETHQK TANRKTQGAIAVDMECSAIAAFANFRKINHFQFFYSADNLDAEAWEPRTLANDADLETKD RIANIALSFAVELFR >gi|304427071|gb|AEEM01000009.1| GENE 12 8895 - 9149 439 84 aa, chain + ## HITS:1 COG:no KEGG:SSU98_0443 NR:ns ## KEGG: SSU98_0443 # Name: not_defined # Def: galactose mutarotase-like protein # Organism: S.suis_98HAH33 # Pathway: Glycolysis / Gluconeogenesis [PATH:ssv00010]; Biosynthesis of secondary metabolites [PATH:ssv01110] # 1 84 372 455 455 144 78.0 8e-34 MTYEQEFLKEFEAWVDSQIAINEMAMEASRKIVEEDKDERAADAYIRYESKLDAYKFIQG KFANYKAGKGFHELPDNLLGERNY >gi|304427071|gb|AEEM01000009.1| GENE 13 9151 - 9468 429 105 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0524 NR:ns ## KEGG: GALLO_0524 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 105 1 105 105 143 100.0 2e-33 MAKKKNRKKEYLLKLKRAGIIKTAATATAKVATNVVSKATLSLEEFSAISAVEGIRPKLI ETLYNEGIKSVSDFKNFTEKDVLAFKGIGPATVNKLKENGVAFKA >gi|304427071|gb|AEEM01000009.1| GENE 14 9720 - 10298 685 192 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|125718620|ref|YP_001035753.1| ribosomal protein N-acetylase [Streptococcus sanguinis SK36] # 8 192 1 186 187 268 67 4e-71 MIKILGQIKDSKLPDIETERLYLRPRLVSDAEDIFAYASLPEVTWPAGFPPAESVEAEAY YLENIMPKRWVEQKVPSGYGICLKGTNKVIGSVDFNKRHADDVLEMGYLLHPDYWGQGFV PEAARALLEVGFTLLNLHKIEIECYGYNKASQRIAEKLGFTLEARIRDRKDAQGKRCDLL RYGLLKSEWEGR >gi|304427071|gb|AEEM01000009.1| GENE 15 10295 - 11590 417 431 aa, chain + ## HITS:1 COG:no KEGG:SMU.1262c NR:ns ## KEGG: SMU.1262c # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 8 430 17 423 446 117 29.0 1e-24 MKRLFWYLLALLPAIVTVSFLILIVLIFPPSLLPDNILSIAPIYITEVILGILMVVYGFR LRSLQISKNLQTIYWLLGILAGILLFLDYRLITLLQSSLLVIYALLFEQRFQSFKTYVQK SRNTFVVLNLFDGFFISICLCGKSIIEKYKTNIEQFFNESPISQDIIEPFIVISICTVLF LILPFIRGYLSVLSYRKQNQISKQLGKVFWNSNLKSYLTSLLSMSLYLTPFFQLDALQSD TILLLLILMSFNVYLWMFVYEDIDKGGEDKEAVISNWILVGLASVFLILLDQIESDLIVI LTWFLPMLIPVFIGGVNNVVPRGCFKAPTPVMKKYIYYLQMMSFNTLFVFNIMSSMFTKQ ILKNGQIEQVNTLKVLLISVLDRVTSSNFTASIFASSIMLICSVAIAYGLSKLMIYFIRR TYMEASDKYFK >gi|304427071|gb|AEEM01000009.1| GENE 16 11611 - 14262 3396 883 aa, chain + ## HITS:1 COG:SP0568 KEGG:ns NR:ns ## COG: SP0568 COG0525 # Protein_GI_number: 15900480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 883 1 883 883 1642 91.0 0 MSKELSPKYNPAEVEAGRYQKWLDEDVFKPSGDKKAHPYSIVIPPPNVTGKLHLGHAWDT TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLAEDGISRYDLGREKFLDKVWEW KDEYASTIKQQWGKMGISVDYSRERFTLDEGLSKAVRKVFVELYKKGWIYRGEFIINWDP KARTALSDIEVIHKDVEGAFYHMNYMLEDGSRSLEVATTRPETMFGDVAVAVNPNDDRYK DLIGQNVILPIVNKAIPIVGDEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQINVMND DGTMNELAGEFAGMDRFEARKAVVKKLEEIGALVEIEKMVHSVGHSERTGVPVEPRLSTQ WFVKMDQLAKNAIANQDTDDEVKFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN AEGEMYVGEEAPEGDGWTQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLVTG YDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGA DALRWFLSNGSAPGQDVRFSYEKMDAAWNFINKIWNISRYILMNNEDLTLDQASANVDKV VAGTAGNVTDRWILHNLNETIAKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKEVL YSDNEDEKVITRSVLLYTLDKILRLLHPIMPFVTEEIFEQISEGSIVTAEYPTVNPAFEN EAAHKGVESLKDLIRAVRNARSEVNVAPSKPITLLVKTSDKELENFFNSNVNYIKRFTNP EKLEISSDIEAPELAMSSVITGAEIFLPLADLLNVEEELARLDKELAKWQKELDMVARKL GNEKFVANAKPEVVQKERDKQVDYQAKYDATVARIEDMKKLVK >gi|304427071|gb|AEEM01000009.1| GENE 17 14324 - 14530 252 68 aa, chain - ## HITS:1 COG:SPy1934 KEGG:ns NR:ns ## COG: SPy1934 COG1476 # Protein_GI_number: 15675737 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 7 67 1 62 68 59 48.0 2e-09 MNNKLELKNNVKQSRLEKNLSQATLAKLVGVSRNTISSIETGQFSPTAKLALLLCIALDK KFEDLFYF >gi|304427071|gb|AEEM01000009.1| GENE 18 14537 - 14839 165 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|171778746|ref|ZP_02919842.1| ## NR: gi|171778746|ref|ZP_02919842.1| hypothetical protein STRINF_00694 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 100 1 100 101 107 66.0 2e-22 MNKEDILKMAQTEKIDDLELQVKDKSIMWSYLVMIVLAALFSFFKALHGFPITDLTATIC ASICANAFYRYLKTRKQQDLFLAIAMFIIALIATIHFFIG >gi|304427071|gb|AEEM01000009.1| GENE 19 15012 - 16058 892 348 aa, chain + ## HITS:1 COG:SPy1552 KEGG:ns NR:ns ## COG: SPy1552 COG2315 # Protein_GI_number: 15675448 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 342 14 349 359 347 47.0 2e-95 MFERLVPFGFQKSQGGYEFCETILDGAFEVRVHVAADGEVSTHVIDTDLNEEYLAIHVAQ AMGNFVGQVREAYLAVLERVATACFEALPFLNPQTNRLAHYLQATYGDMYDHPFEKYPEF SSYRYPQNHKWYALIMTVARGKLDLGDETWSKEALEQKIEIINIKVKPKDLPRLLEISGI YPSYHMSKKSWVSLVLDETVSDDLLFSLVENSRALVAGKSLGSLSGPDYWIIPANLKYYD IDAEFAANSIINWTQKASIKAGDYVAIYITAPTRALRYLCRVLESDIPNSGYREEKSIKK LIKIELLQTFSDSQFPIAVLKECGVTNIRGPRRMTKELITLIDSNIKS >gi|304427071|gb|AEEM01000009.1| GENE 20 16174 - 17388 734 404 aa, chain + ## HITS:1 COG:SPy0543 KEGG:ns NR:ns ## COG: SPy0543 COG0477 # Protein_GI_number: 15674642 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pyogenes M1 GAS # 6 401 5 400 402 375 54.0 1e-103 MKKVEQKNASLLVSSSAISKIGDVLFDYVNNSFLASLNMNSMVLVGVYQSLENIMGVLFN LFGGVIADRFRRKKIIILSDFFSGLACIALSFISDNTWLIYAIIAANVFLAFLSSFSTPA YNAFTKEVVEKDNIALLNSYLQTAATVVKIVIPIVAVGVYRLIGIHGALLLDGVSFILSS IIVAFVSPILEENTKNNHFSMASIFQDLISGFRYLAQKRQVSVLIALSASVNFFMAAYNL LLPYSNQMFPKITENIYGTFLTAEAVGGLIGALISGRVNKKLSTDLLMTFLAVAGLFLGL APILYHIFPNVVFLALSPAFCSIFLTVFNIHSFSLVQREVDSDYLGRVLGIVFTIAVLFM PLGTAIFTIILRPDYEFNYLFVGLAVIILSFIFLMLLRKTNDKE >gi|304427071|gb|AEEM01000009.1| GENE 21 17613 - 18161 436 182 aa, chain - ## HITS:1 COG:L108801 KEGG:ns NR:ns ## COG: L108801 COG1309 # Protein_GI_number: 15674221 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 9 175 11 190 204 63 28.0 2e-10 MKRSEQKARTKYNIRQAFIDLLQRKEMDNITITELAKSANIDRKTFYLHYDTTFDVYHDI IDDVSNQLDDILKQQNNFNFFIFFNELNQVMQANFKFYQTIAKQKSYAYLIKDFTDILEN GLTHYYLSSNQTTSNKIKIRYISNGIMGVYINWLAQPNNISQDELVHILSDLLENDIKHL NN >gi|304427071|gb|AEEM01000009.1| GENE 22 18297 - 19091 549 264 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0533 NR:ns ## KEGG: GALLO_0533 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 264 1 264 264 484 99.0 1e-135 MVFDTLFNAYPQGDVTLQDFVTALTPGAPNFMLTLTTVLITFVLGFLVYIYSFVLVDREK SGPYPLWMHTFYCAADFMGIWVFLAAYQNYHHFWFFLLGVIGEIVWVGFELYCLWRAVTY ERKEIWGDKVTLKKAIFDCCLQVLIFFVSLNLLRVELHDISMFKFWIFTQVIICSVPGLF WEKRGTRIGASWQLNIVLVLVAIMSFNPWNMWALISPQFFSLSNNPWYYFVGLVTLMFAL RGCYIYAKLPQKPKYLPDGSKTIF >gi|304427071|gb|AEEM01000009.1| GENE 23 19439 - 20431 1421 330 aa, chain + ## HITS:1 COG:SP1970 KEGG:ns NR:ns ## COG: SP1970 COG2502 # Protein_GI_number: 15901793 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Streptococcus pneumoniae TIGR4 # 1 330 1 330 330 593 86.0 1e-169 MKKSFIHQQQEISFVKNTFTQYLIDKLDIVEVQGPILSQVGDGMQDNLNGIENPVSVHVK RIPDAEYEVVHSLAKWKRHTLARFGFNEGEGLFVHMKALRPDEEELDPIHSIYVDQWDWE KVIPNGRRNIEYLKETVEQVYKAIRLTELAVEARFDIEAVLPKKITFIHTEELVERYPDL TPKERENAAAKEFGAIFLIGIGGILPDGQRHDGRAPDYDDWTSESENGYHGLNGDIIVWN EALDSAFELSSMGIRVDEEALKRQVKITGDEDRLQLEWHKALLNGLFPLTIGGGIGQSRM AMFLLRKKHIGEVQSSVWPKEVRDTYENIL >gi|304427071|gb|AEEM01000009.1| GENE 24 20565 - 21317 952 250 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0535 NR:ns ## KEGG: GALLO_0535 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 250 1 250 250 192 98.0 1e-47 MKKKMKLTILLMATALIGVSQDQGLLTTPVKNNHVVLADTKSKSKTTKKDDKATKAAKKA VKQLEKDQTQENLDLATKKVKAVKNKKVKKQLKKRIATVKTAIETQKQEETAQAVAETAV ANLEANQTRENVDDAKNKVDAVTDTAKKGDFNNRINAVVSAIETKEAEEAAQAEEARKAE EARQAEEAARQAQEQAAAEEAARQAQEQAAAQQAQQQAASGYSRDARGRWHRPNGQYASK AEIAAAGLPW >gi|304427071|gb|AEEM01000009.1| GENE 25 21489 - 22331 1015 280 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0536 NR:ns ## KEGG: GALLO_0536 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 280 1 280 280 326 98.0 7e-88 MNFKTFFKDKKNLAITILSVLLIASFSSQGNQSQELSQAEDKIEQLSQDVKQAKSDLKDS QDELADFKEENADYIEVGKKEVQKTKEIENSAETAVKNLEKDQTQANLDLATSKVDAVTD ADKKEKLQKRIATVKTAIEAKKEKELEDKAETAVKNLENNQSRDNIDDAKNKVNAVNNST KKEAFNNRINAVVSAIEAKEAEAAKQAQEQAAAEAAAQQAQQQQNQAAAQPGDTTTVYIT RTGSHYHLNPNCRGLNRSKSTTPVSLSEAQALGLTLCGFE >gi|304427071|gb|AEEM01000009.1| GENE 26 22457 - 23005 410 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 2 180 11 192 199 162 43 3e-39 MVVMRVVAGKFGGRPLKTLDGKITRPTTDKVKGAIFNMIGPFFDGGRVLDLFSGSGSLAI EAISRGMDEAVLVERNRQAQAIILENIKMTKSEQQFHLLKMDANKAIGVVSGQFDLVLLD PPYAKEEIVKNITELEEAGLLSEDVMLVCETDKAVDLPEEISNFGIWKQKTYGISKVTVY VR >gi|304427071|gb|AEEM01000009.1| GENE 27 23038 - 23535 315 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 3 164 4 164 164 125 41 3e-28 MAKIGLFTGSFDPVTNGHLDIIARASKLFDTLFVGIFYNKDKNGFFSVDERRQMLEEALQ EFPNVKVITARDSLVVDIAKRLEVGYLVRGLRNGKDLEYEADLAFYNHYLASEIESVFLL SSPDLVHVSSSRIRELIYFHSDISDFVPTSVVKKVEEKYGNLKKI >gi|304427071|gb|AEEM01000009.1| GENE 28 23513 - 24598 431 361 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 [Bacillus selenitireducens MLS10] # 24 357 15 343 350 170 33 1e-41 MAILKRFKEILKKLGRILYRFKWWILGVVGIVFLLFSLLYPLDYYIEMPGGAYDIRSVLT VDNKEDDEDGSYNFVAVTVSQATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYY METSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKGILNIADTVTGVNGQTFNSSA ELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVDF DTSGVGGPSAGLMFTLDIYDQLNSEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAK AGADIFFVPNNPVDEETLKKDPDAKTNYEEAVEAAKDLDTDMKIVPVTTVQEAIDYLRNN D >gi|304427071|gb|AEEM01000009.1| GENE 29 24727 - 24981 245 84 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0540 NR:ns ## KEGG: GALLO_0540 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 84 1 84 84 137 100.0 1e-31 MTNWQKRFVIWFNLAILFIFLDVTLLIFIRSINSDGVYQTMQMKWLTFLMWILCYAFVWM CQGVGYMFFKHIKQARKQEDRHVV >gi|304427071|gb|AEEM01000009.1| GENE 30 25165 - 25824 1115 219 aa, chain + ## HITS:1 COG:SP1778 KEGG:ns NR:ns ## COG: SP1778 COG0580 # Protein_GI_number: 15901607 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Streptococcus pneumoniae TIGR4 # 3 219 2 221 222 197 63.0 2e-50 MSKKFFAELIGTFVLVFLGTGAAVLGGGADSVVGYASIALAFGLTIVASAYSIGTVSGAH LNPAVSIAMYLNKRIDSKELGTYILGQVVGALLGSFTLLAITGDNATLGQNVVADGYSLV TGFLVEVILTFIFILVILTVTSSRKGNAQLAGLVIGLTLTLIHFVGIPVTGMSANPARSL APALLAGGDALSQIWIFILAPIVGGVLASIVSQSLLETE >gi|304427071|gb|AEEM01000009.1| GENE 31 25963 - 26472 484 169 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0542 NR:ns ## KEGG: GALLO_0542 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 169 1 169 169 295 99.0 4e-79 MSAKGKRLLVVITLLGITTVCSVIGYHVYRRNDFKRAYEHGTLFEQLDVLMNSQRYVTVI EEAGYEVDKVDYVMYNRIVTLTTTGTPAITIESSSDSSAFFVTFETTEDEQEVSVYFELD GDFNIAYQTVRDAQGNDVAITTTQQTKLLNIVKKEVRKMLKTIYRTMYP >gi|304427071|gb|AEEM01000009.1| GENE 32 26584 - 27909 1051 441 aa, chain + ## HITS:1 COG:L181858 KEGG:ns NR:ns ## COG: L181858 COG0737 # Protein_GI_number: 15672159 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Lactococcus lactis # 4 440 3 445 447 325 41.0 9e-89 MTEKLTILHLNDWHSHFETYPKLKRFFQDYADQDAEVIKIDVGDNIDRWHPMTDATQGKY NVQLMNELGIDFATIGNNEGIGLAKTMLNQVYESANFDVILGNLEDEAGRPTWAKPYKIY ETALGTKIVFLAYTFPYYLTYHPGGWQVLDPITCLKRDLEIPEVKSADFHILLSHLGLPL DEKITTEVPEIDLIIGAHTHHVFEDGACLNGTYLAAAGKYGQFAGEINLTFEHRELSDIT IHAHETSHMPSKPGDKEWIETVEVNGRKLLSQEVVKSFDHELSLDESCQIVMAAMKEYAN ADIAMINSGLVVTPFSKKVTKDTLQHSLPHQMRLARLEVTTDELTTICQDVFSQAELLAN QQIRGMGFRGKEFGRVLTSGFDYKNGKIVYNKKVTNEKDTISLVLVDQYYFARYFETIKS HQAELLFPELLRELVETYLKK >gi|304427071|gb|AEEM01000009.1| GENE 33 27941 - 28519 679 192 aa, chain + ## HITS:1 COG:SPy1534 KEGG:ns NR:ns ## COG: SPy1534 COG4470 # Protein_GI_number: 15675433 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 192 9 214 214 174 54.0 6e-44 MRKDISPEMYNYNKFPGPQFVAFSDRVKSDDIELLILENEKNAFDATVFSQRFSEILLKY DYIVGDWGNEQLRLKGFYKDDRDVKKTNRISRLDDYIKEYCNFGCAYFVLENLEPRRVKS DDDKPTKRHKSQKRSSQKKKSEPKKSDRSANKHFKSQKRKDTKVRGERQQKREQQKEIQS AKKQFVIRRKEK >gi|304427071|gb|AEEM01000009.1| GENE 34 28541 - 29647 1262 368 aa, chain + ## HITS:1 COG:SPy1533 KEGG:ns NR:ns ## COG: SPy1533 COG0820 # Protein_GI_number: 15675432 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Streptococcus pyogenes M1 GAS # 8 366 1 359 359 647 86.0 0 MQTETKDMKPSIYGLTRDELIEWAIEHGEKKFRATQIWDWLYRKRVQSFEEMTNISKDFI AVLNENFCVNPLKQRVVQEASDGTVKYLFELPDGMLIETVLMRQHYGLSVCVTSQVGCNM GCSFCASGLIKKQRDLTSGEITSQIMMVQKYFDERGQDERVSHVVVMGIGEPFDNYNNVL RFLRTINDDNGLAIGARHITVSTSGLAHKIRDFAHESLQVNLAVSLHAPNNELRSQIMRV NRSFPLEKLFAAIEYYVETTNRRVTFEYIMLNEVNDFPENAQELADLTKKIRKLSYINLI PYNPVSEHDQYSRSSKERVAAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQ KAVAEKTN >gi|304427071|gb|AEEM01000009.1| GENE 35 29650 - 30168 254 172 aa, chain + ## HITS:1 COG:SP0769 KEGG:ns NR:ns ## COG: SP0769 COG4767 # Protein_GI_number: 15900663 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Streptococcus pneumoniae TIGR4 # 23 159 13 150 159 124 46.0 1e-28 MSRFLDKTAELTPLGRRIIKVLVVLYAIAICLMCFSPQTTIDGIETPNIIYYGRLRFLLV PFNTFVGFSQLDGFLEIFWVIAQNVMNIFLLFPLMLGVVALCPKLRTWQRATLLAFIISL CIETTQLVVDLLYNANRVFEIDDLWTNTLGGLLAFLAYQWFVKRYQKYQREN >gi|304427071|gb|AEEM01000009.1| GENE 36 30343 - 32088 195 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 315 551 264 502 563 79 27 3e-14 MKIIKDLWWFFRQEKRRYLIGIISLSLVAVLNLIPPKVMGTVIDRVTAGDLTHSELLLNL LWLVLSAVAMYFLRYIWRMYIFGTSYRLGQIMRFRLFDHFTKMSPSFYQKYRTGDLRAHA TNDINALTRLAGGGVMSAVDATITAMVTLITMFFTISWQMTLVAIIPLPFMAYATSRLGR QTHKAFSQSQAAFSELNNKVQESVSGIKVTKSFGYQDDELQSFQETNEMTFKKNMTTMKY DVMFDPLVLLFIGASYVLTLFMGAIMVAAGHVTVGSLVTFITYLDMLVWPLMAIGFLFNM VQRGSVSYERISQLLQQESDVKEAENPLPTIKNGRLVYDIDAFHYENEETLADIHFALEQ GQTLGLVGQTGSGKTTLIRLLLREYDLQEGQITLDGHDIREYRLADLRRLIGYVPQDQFL FATSILENIRFGNPKSSLAQVEAAAKLARVYDDIVAMPDGFETVIGEKGVSLSGGQKQRI AMSRAMILDPDILILDDSLSAVDAKTEHAIIENLKETRQNKSTIITAHRLSAVVHADLIL VLQDGHIIERGRHEELIEQGGWYADTYEAQQLEMEGDADEE >gi|304427071|gb|AEEM01000009.1| GENE 37 32078 - 33823 220 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 336 580 7 249 318 89 25 3e-17 MKNNANQWRVFKRLMSYLKPYKFLTILALALLLLTTVVRSVIPLIASYFIDHFLTNINQT AMLILVGYYLMYVLQTIIQYLGNFYFARVSYSVVRDIRRDAFANMEKLGMAYFDQTPAGS IVSRLTNDTEAVSDMFSGILSSFISAIFIFTVTLLTMLRLNAVLTGWVAIFLPFIFILVN LYRKKSVAVIEKTRALLSDINSKLSESIEGIRIIQSFSQEDRLKDEFEAINEEHVLYANR SMALDSLFLRPAMSLLKLLAYAILMAYFGFRGMEIGISAGLMYAFIQYVNRLFDPLIEVT QNFSTLQTSMVSAGRVFDLIDERQYEPEQKNGEATVQAGNIEFKNVSFSYDGERQILDNI SFKVNQGETIAFVGSTGSGKSSIINVFMRFYEFQSGEVLLDGVDIREYPKEELRRNIGLV LQDPFLYHGTIKSNIKMYQDISDEAVQAAAAFVDADQFIQKLPEKYETKVTERGSSFSTG QRQLLAFARTVASQPKILILDEATANIDSETETIVQESLKKMRQGRTTIAIAHRLSTIQD ANCIYVLDKGKIIESGSHDELLSQKGTYYRMYQLQAGMMEN >gi|304427071|gb|AEEM01000009.1| GENE 38 34163 - 35041 680 292 aa, chain + ## HITS:1 COG:SP2003 KEGG:ns NR:ns ## COG: SP2003 COG1131 # Protein_GI_number: 15901826 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 291 3 293 294 314 57.0 1e-85 MITVENLSKTIKGKPILQDISFEVAAGDCVALIGPNGAGKTTLMSCLLGDLKISKGKIVI NALAPKSQQLKEIVAVLPQENRLPQKLRVSELIEFFKSIAKTPLADQEIDKILQFSEEQK AQLTEKLSGGQKRLLAFALCLISQPKILFLDEPTAAMDTSTRQHFWQIIQSLKAKGVTIF YSSHYIEEVEHTAERILVLHHGKLLRDTTPFAMREAEHEKQLTLPKNFLPIVEKLPHIDN IELKNDTVTFMTKEIDSVWQKLQEQGCQIADIEIQNKTLLNTLFDQTQEDEK >gi|304427071|gb|AEEM01000009.1| GENE 39 35038 - 35769 697 243 aa, chain + ## HITS:1 COG:SP2002 KEGG:ns NR:ns ## COG: SP2002 COG0842 # Protein_GI_number: 15901825 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 2 241 5 243 245 161 40.0 1e-39 MIALLKIEWIKTWRFWMTFVLSIGMPVFFFLFFSGMELSSNPEEQKVLVTAYMLTMTAFS MSSFGFFSFPAMLVEDKTNHWLTYIEHSSVPIWQYYLAKVIRVLFCFLLSIVATFLFGAI FRGVSMPLSRWFGAGALLLVSSFLFLAFGLLISQIKSQQLMTIVGDISFIGLAIIGGSWM PIENFPDWMQKISKVTPVYHVNQLVTQFAQKGQVNGKSLIIILGYVIIIAALALMIKNKT EVK >gi|304427071|gb|AEEM01000009.1| GENE 40 35769 - 36857 676 362 aa, chain + ## HITS:1 COG:SP2001 KEGG:ns NR:ns ## COG: SP2001 COG4585 # Protein_GI_number: 15901824 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 361 1 363 365 225 35.0 1e-58 MLKRIRGIHPLFYMPLAFLAFPVLGVFFFDYPTWTLGITFLFLLSYLFLTHFEENILTNL CWIFMLLYVVYMTIYVDGGMMWFTFYFNSLLVFRFQDNYASFRFLAYDLAMLFMIIAGVS LADDLSSQVMIFLVPVVNYGILVYWMDDRKNEIQRKAIMEKNRTINLLLAENERSRIGRD LHDTLGHVFAAMTLKTELALKQLEKGKYDLVKKELEELNQTSRSSMHDVRNIVNNLKFRT VSEEIEHLNEFFAMTDIDYQLQNDLNVEAMAPLMQSSIGMILRELSNNVIKHSQAQTCRI HLFENQEKLVMTITDDGVGFDGLTGNELKSIRDRLLLVKGDVEILSQAKPTMIQVSISSK EN >gi|304427071|gb|AEEM01000009.1| GENE 41 36859 - 37455 604 198 aa, chain + ## HITS:1 COG:SP2000 KEGG:ns NR:ns ## COG: SP2000 COG2197 # Protein_GI_number: 15901823 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 198 1 199 199 250 65.0 1e-66 MKLLVAEDQSMLRDALCQLLLMEDDVDEILQAGDGAQAIGILQMENVDVAILDVEMPKKS GLDVLEWIRKHKEMKVIIVTTFKRVGYFERAVKAGVDAYVLKDRSTSELMTTIHTVLAGK KEYSPELMETMMTQDNPLSQQEKRILQLISLGKTNQEIADTLYLSNGTVRNYISSILNKL SANNRVEATRIAEEHGWV >gi|304427071|gb|AEEM01000009.1| GENE 42 37635 - 37928 419 97 aa, chain + ## HITS:1 COG:SA0271 KEGG:ns NR:ns ## COG: SA0271 COG4842 # Protein_GI_number: 15925984 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 96 1 96 97 85 50.0 3e-17 MAQIKLTPDELRTQAQSYTEGATSVRDVLTRLTNTQAEIDANWDGNAFDSFEQQFNELSP KVSQFADLLDEINQQLNQVANTLEETDAQIASQIGFN >gi|304427071|gb|AEEM01000009.1| GENE 43 38002 - 41091 3418 1029 aa, chain + ## HITS:1 COG:lin0050 KEGG:ns NR:ns ## COG: lin0050 COG1511 # Protein_GI_number: 16799129 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 3 1013 2 1051 1067 181 20.0 8e-45 MKKLIKYIVSIGAVVLLLVAVVGLNIAIQDNNETTATSSSGTATRLNVAIVNEDKAVVSG NNTYSLGNSYIKKLEKDDSQNWSVVTRGTADSGNYQLIVIIPSDFSAKILDLNSLSAEQA TISYEVKADGNQQIETEATKVGKDIVSDLNNQLVDMYMASILSNLYTAQQNVQVIANQQS GNIYSYRTNLLGSAVDFENNFPTLVTTANSSLTANEALIQSLSTFSSLYNTLDSSQQSFS TDLMSLVEKRANDSISYEDFASALMAVDPDALSTDLTTMTELLQDTQSQLETTVSSVSSS STSGNDDVQNQVDSLTEQINTLENQFAEQLQVLQEQKDNIQQFAAEEVAKYYKDSSDLTV ADLLNQKSDGNSYLATTADSYRSSLQSTTSVALNQLPAIDQSGISSLAANMTYLDASAAD SLSDFSTDLAAKFSSEVSYTPSALSSELAAAKTALENAKNDFETEEQTYTNSVTNATNSA TTVKAKVSLTLPSRAGFVLDSWSYNGKTYSSSDTENVEVTLSDSSSSDNSFKFTYHYDTD TADTTDDSSVSDSISVKINGVTVTSADTMPDMTDYQTKAQAYRTAESAYTAKVQEVKDVY KNAQTLLNQYYTTDDFLNQSVTDLITDIVTTALTDNLTSYTENSTSTTDSIKQQIDNLKA KRDTIANQLASLQSSNEAITSSLTSEINAVQSLQEQISDLKTQETSVSSALSDSDSTLGT LSSTLSDLLSSTSELKSTSESNADEASQVSTLFSSFNSDVESAQSNSSKLATDAQDLMAQ FNKELEESGDFVGSFVKVLNNAYSNGVANEALLDFLSNPVTESSSSVKATVNVYRPFTWI LLLEIVTLFTAYIFATYNVIQKVKDKFSINKLQETDILNTAVIALLAIIIGVILGSVSAS RLSVERELMPSWVLVVALFSLILTQGQYLLIKNFKAFGMGLSLFMTISFVYLSNAIGTTA TLSGVPANLKKLNVLSILEETLSSYFDGQSASLLLLLGAIVAILLLIGVNVFVTLNWQKL LQKASKAEV >gi|304427071|gb|AEEM01000009.1| GENE 44 41094 - 41573 266 159 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKYLVFIIGLLTCFSLTVSTISADDELKDNSLQIDSSRLEENKTTDVSSSLDLTKNLFS NSDRALLEKNQENVANDFKEQQDQLFTQETIATDDSQVEALFSSETAVGQYTTKVNTSVD TTSQTSNVSGLLAIFYGVASLLLICGASFATYVVSRGEE >gi|304427071|gb|AEEM01000009.1| GENE 45 41573 - 41815 243 80 aa, chain + ## HITS:1 COG:no KEGG:SGO_0062 NR:ns ## KEGG: SGO_0062 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 78 1 78 82 98 60.0 9e-20 MDNHINVTLIFKGQSMDVRIPIKIEVRKLIREFDKIFGNDSLRHKYQLRVVNKGLVLDEG KWLAHYPVTTGDVIEVEEIN >gi|304427071|gb|AEEM01000009.1| GENE 46 41815 - 43059 1348 414 aa, chain + ## HITS:1 COG:lin0053 KEGG:ns NR:ns ## COG: lin0053 COG4499 # Protein_GI_number: 16799132 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 12 395 13 397 398 208 31.0 2e-53 MSDVKLTFLGQDFVYKKNETNWEVHLKRSDVATQDMNRLLLLNLHHPMFLEQSMSFDDDT VQFNYELEEDGLNLATIKARSLSEQLRLALNVLDLEQCLQLPVTFFLHPENLFITKDERV KIAYRAVPDIMVPASIDSEEFLKQAKCYIIAIFTEHPFSSLYEGALDVVEVPEFLDNIRK LSSVEDVRESLTAYYREKCEQESASLTIVKKSRYKLYKYASIWLSTLVVLLLIPLIYLVF IRNPFKEKMLDADTAFIKVDYSAVISELKNVDVDDLPYTQKYELAYSYIKSLDFSEDKEE VIMNNVTLKTEDLYLEYWIEIGRGNADDALDIAKRLDDSDLILYAIAQEMENVRNDDSLS GSDRESQLDDLQSEYDKYWEDRTNALTDASGNTDSSSDDSSSSSSTSTSESSDN >gi|304427071|gb|AEEM01000009.1| GENE 47 43074 - 44718 1370 548 aa, chain + ## HITS:1 COG:lin0054 KEGG:ns NR:ns ## COG: lin0054 COG1674 # Protein_GI_number: 16799133 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Listeria innocua # 62 548 62 552 1498 434 43.0 1e-121 MSKDLAIYKQGLRYELPLSEDKPQLLSDTEKATFHIQGLPAAIRLSLEEDKITYEYNGLT GELSDGVALDDVSFYHLAETYQIFDLLDKQEIYISQKSGSDFCLENADVEAVLQRAETNW QLTLLAGSLYVNNVQLKTETIQLSFGDELSFGNVFFKFFGDEVWVKGPVTVTQELIEKTE SNHTFYEEYPDYHRSPRIIYRSSEDTIAINAPAKEPNKPQDGLLRMIVPPLVMVSVTILI SLIQPRGIYILVTMAMSVVTVIFSVTTYIKNRKQYKVDLRERIASYHRYLSDKAIELNDL AQDQKQGQLYHYPAIETLDELSAHYNHRIYEKTPLHFDFLYYRLGLGKVPTTYALKYSQT ERSGQTDPLEAEGYALYRREREISGMPIVANLAHGPVGYIGPRPLVLEQLQLMVNQLAFF HSYHDVQFITIMPEEELPQWEWMRWLPHATLQGMNVRGFVYNQRTRDQVLNSLTQILKLR RSQQESKESAESTLFSPHYVVIVTDEKLILDHVIMEFFTEDPTALGCSIIFVEDVLSSLS ENIKTIIN Prediction of potential genes in microbial genomes Time: Sun May 29 12:22:40 2011 Seq name: gi|304427063|gb|AEEM01000010.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00020, whole genome shotgun sequence Length of sequence - 4260 bp Number of predicted genes - 7, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 7.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 602 332 ## gbs1068 FtsK/SpoIIIE family protein 2 1 Op 2 . + CDS 606 - 908 511 ## COG4495 Uncharacterized protein conserved in bacteria 3 1 Op 3 . + CDS 929 - 1318 407 ## 4 1 Op 4 . + CDS 1334 - 1615 292 ## 5 1 Op 5 . + CDS 1634 - 1936 381 ## 6 1 Op 6 . + CDS 1952 - 3271 1467 ## 7 1 Op 7 . + CDS 3277 - 4056 255 ## Predicted protein(s) >gi|304427063|gb|AEEM01000010.1| GENE 1 3 - 602 332 199 aa, chain + ## HITS:1 COG:no KEGG:gbs1068 NR:ns ## KEGG: gbs1068 # Name: not_defined # Def: FtsK/SpoIIIE family protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 2 191 1131 1320 1323 94 28.0 2e-18 VNLSLSKLKNILILSEQREILTNIIRHFTLVVDELCPKGHLSIVDASDDFPFLKQHSNVY INSQMSQEVFDKLLEELENRKIQPKGTETFVIIPDLAVFLDVFAKQAESFKLLYTEGPRY GLHFVIAGLKSTFFKTDSIIKLLKDDIDTALIGLRMYDQSLVKHKEVSREAELDKDQLYF YNKGNYQKVKIIYQEEIGE >gi|304427063|gb|AEEM01000010.1| GENE 2 606 - 908 511 100 aa, chain + ## HITS:1 COG:BH0980 KEGG:ns NR:ns ## COG: BH0980 COG4495 # Protein_GI_number: 15613543 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 5 98 1 101 102 89 43.0 2e-18 MSQELLPLGSVVYLQEGTEKLMIIGRGIVYQDEETNTEVFVDYMGCIFPTGINPNNTIFF NQENIDRVVFEGLKDEDEERFLQVYDEWLKKIDVPKKEIK >gi|304427063|gb|AEEM01000010.1| GENE 3 929 - 1318 407 129 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNYDERISALTSFKSTVSSAGDTVDGVSGVSSEVSGWEGDAKTRFDDYIEVVKGDAASLS GKKAQFLTDIQGQIDAIKSQMASEVAQYTYITQATYDSKSSTKNKSLKKSAIRNLNVDSS VKKRLLNMI >gi|304427063|gb|AEEM01000010.1| GENE 4 1334 - 1615 292 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKIKMDQESLTTEITNVEEKVSVYRTATVNATAQFSTLQNTLQGEAYTSLVNSINKTLE TQKTLVAQCVVLINNAKNFAEDISSEESSVTFG >gi|304427063|gb|AEEM01000010.1| GENE 5 1634 - 1936 381 100 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MANTINYDESKHKELEAELTKINDNFENLISELSNLQDSVTTNLKGKATTSLVEEISLLI SKLTSEKENWSQVTSNANKLEKLIKEADEALQKQIDSSGS >gi|304427063|gb|AEEM01000010.1| GENE 6 1952 - 3271 1467 439 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIGKFTIPLDEYYEVSNNIRLKVTELIDDVEDEFLTKVSNNIGFLDDRDVSVVEGFSSY TSAKTELETLRQHETNLNKMSQEGDGNPLNGVVTTDNEYATTFSGIADGVSNSNVSSVVS NLDNMIGLTEAKISFVDFIGSITDSSDRAILANILGIEPADLTSWAKNAVSGITSAKEFT SLLNTLYTGSGKGISFETLLYTDEIGQAMQNSKLVEKVLTFMMDTPYALKSQKWASVVSK YAGKVTSGLGKAKIFGSVISGDFTSAIGKSAKDFLKSDAVKLGGETVAWATLGIEEGLNI KSAWSSSETDSKTTAGKVGKSIVGGTIDTISNVGPLDGMWLGAKIGAATGNPIGIAAGTV AGLALGSFNLVTSAVNPKFKKSVYNGIKNGAYAAVDWVEDKALSAGKAVTQSMESVKSIG KNVSNFFNGGAKTVSSWFG >gi|304427063|gb|AEEM01000010.1| GENE 7 3277 - 4056 255 259 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDELQRVSEEAITSSKKIRLWTAIIIGPIYICMLLFIPLYGIKFGEAVSQQERTLLTNFE YSLTIPNSVLGYLFLIFWIVYFINYLVSNRNHIKAYIYNGIWSGLLTLIAYYQFIVAFQF FVPLLIIRIFYWFLFVLSLIYIFYIIFTDTNFSTSIFQKVDTKILTNALLILWGISAILN LLISGFENLLAKLLLAAFPVAPLIFIFIFTNIYQSLISTLKSLFIINKNQEKYRQEFGYS VKDWYGKKSKMYKESLKNK Prediction of potential genes in microbial genomes Time: Sun May 29 12:24:36 2011 Seq name: gi|304426803|gb|AEEM01000011.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00021, whole genome shotgun sequence Length of sequence - 250075 bp Number of predicted genes - 258, with homology - 234 Number of transcription units - 113, operones - 68 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 589 519 ## SSA_2277 DNA segregation ATPase FtsK/SpoIIIE family protein, putative 2 1 Op 2 . + CDS 602 - 958 300 ## 3 1 Op 3 . + CDS 961 - 1362 425 ## 4 1 Op 4 . + CDS 1331 - 2770 1613 ## lwe1939 hypothetical protein + Prom 2955 - 3014 6.7 5 2 Op 1 . + CDS 3063 - 3431 252 ## SAG1020 putative lipoprotein 6 2 Op 2 . + CDS 3435 - 3911 417 ## gi|288731502|emb|CBI13056.1| hypothetical protein 7 2 Op 3 . + CDS 3914 - 4369 383 ## GALLO_0565 hypothetical protein + Prom 4417 - 4476 6.4 8 3 Op 1 . + CDS 4603 - 5100 229 ## gi|228477768|ref|ZP_04062397.1| conserved hypothetical protein 9 3 Op 2 . + CDS 5156 - 5332 70 ## 10 3 Op 3 . + CDS 5336 - 5500 58 ## 11 3 Op 4 . + CDS 5490 - 5846 135 ## gi|228477768|ref|ZP_04062397.1| conserved hypothetical protein + Prom 5861 - 5920 4.7 12 4 Op 1 . + CDS 5948 - 6175 211 ## SGO_0072 hypothetical protein 13 4 Op 2 . + CDS 6200 - 6283 86 ## 14 4 Op 3 . + CDS 6292 - 7080 262 ## 15 4 Op 4 . + CDS 7102 - 7938 503 ## 16 4 Op 5 . + CDS 7960 - 8814 298 ## 17 4 Op 6 . + CDS 8836 - 9645 352 ## gi|228478345|ref|ZP_04062953.1| putative membrane protein 18 4 Op 7 . + CDS 9710 - 10678 891 ## SSA_1597 hypothetical protein 19 4 Op 8 . + CDS 10724 - 11116 583 ## + Prom 11118 - 11177 2.5 20 5 Tu 1 . + CDS 11245 - 11730 378 ## + Prom 11740 - 11799 2.0 21 6 Tu 1 . + CDS 11871 - 12293 444 ## SZO_14530 hypothetical protein + Prom 12342 - 12401 4.2 22 7 Op 1 . + CDS 12537 - 13280 600 ## SZO_17200 hypothetical protein 23 7 Op 2 . + CDS 13358 - 14230 171 ## SGO_0072 hypothetical protein + Prom 14251 - 14310 6.2 24 8 Tu 1 . + CDS 14363 - 15052 612 ## COG1266 Predicted metal-dependent membrane protease + Term 15163 - 15202 8.6 25 9 Op 1 . - CDS 15375 - 15566 164 ## GALLO_0575 hypothetical protein 26 9 Op 2 . - CDS 15556 - 16197 492 ## GALLO_0576 hypothetical protein - Prom 16313 - 16372 10.3 + Prom 16255 - 16314 14.2 27 10 Tu 1 . + CDS 16349 - 19714 4531 ## COG4932 Predicted outer membrane protein + Term 19763 - 19800 3.1 + Prom 20421 - 20480 8.0 28 11 Tu 1 . + CDS 20628 - 20945 153 ## GALLO_0578 hypothetical protein + Term 20954 - 21007 1.8 + Prom 20950 - 21009 7.5 29 12 Op 1 . + CDS 21078 - 21383 220 ## GALLO_0579 hypothetical protein 30 12 Op 2 . + CDS 21453 - 22181 603 ## GALLO_0580 hypothetical protein + Term 22192 - 22236 -0.5 + Prom 22199 - 22258 2.0 31 13 Tu 1 . + CDS 22340 - 23503 569 ## GALLO_0581 putative permease + Prom 24054 - 24113 2.7 32 14 Op 1 . + CDS 24205 - 24492 292 ## GALLO_0582 putative chorismate mutase 33 14 Op 2 35/0.000 + CDS 24506 - 25861 1533 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 34 14 Op 3 13/0.000 + CDS 25858 - 26427 671 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 35 14 Op 4 21/0.000 + CDS 26442 - 27446 1329 ## COG0547 Anthranilate phosphoribosyltransferase 36 14 Op 5 9/0.000 + CDS 27443 - 28210 874 ## COG0134 Indole-3-glycerol phosphate synthase 37 14 Op 6 23/0.000 + CDS 28197 - 28778 347 ## COG0135 Phosphoribosylanthranilate isomerase 38 14 Op 7 37/0.000 + CDS 28775 - 29977 1630 ## COG0133 Tryptophan synthase beta chain 39 14 Op 8 . + CDS 29981 - 30763 929 ## PROTEIN SUPPORTED gi|149002101|ref|ZP_01827055.1| ribosomal protein L11 methyltransferase + Term 30783 - 30822 4.3 - Term 30771 - 30810 0.5 40 15 Op 1 . - CDS 30828 - 32168 1256 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 32189 - 32248 5.3 41 15 Op 2 . - CDS 32251 - 32901 310 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases - Prom 32956 - 33015 9.8 + Prom 32917 - 32976 6.3 42 16 Tu 1 . + CDS 33031 - 33561 790 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Term 33583 - 33607 -1.0 + Prom 33666 - 33725 12.6 43 17 Op 1 . + CDS 33802 - 34068 207 ## + Term 34093 - 34142 8.4 + Prom 34081 - 34140 4.4 44 17 Op 2 . + CDS 34161 - 35777 1010 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 45 17 Op 3 . + CDS 35789 - 36640 333 ## gi|160946697|ref|ZP_02093900.1| hypothetical protein PEPMIC_00655 + Prom 36643 - 36702 7.3 46 18 Op 1 . + CDS 36935 - 37255 176 ## 47 18 Op 2 . + CDS 37255 - 38244 211 ## gi|257088604|ref|ZP_05582965.1| predicted protein 48 18 Op 3 . + CDS 38257 - 39279 72 ## gi|160946700|ref|ZP_02093903.1| hypothetical protein PEPMIC_00658 49 18 Op 4 . + CDS 39302 - 40159 298 ## 50 18 Op 5 . + CDS 40149 - 40934 304 ## COG0778 Nitroreductase + Term 40945 - 40974 2.1 + Prom 40961 - 41020 1.7 51 19 Op 1 5/0.000 + CDS 41054 - 41263 254 ## COG4483 Uncharacterized protein conserved in bacteria 52 19 Op 2 2/0.056 + CDS 41256 - 42224 1043 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 53 19 Op 3 . + CDS 42236 - 42616 616 ## COG0607 Rhodanese-related sulfurtransferase 54 19 Op 4 . + CDS 42631 - 43677 879 ## GALLO_0596 hypothetical protein + Term 43710 - 43741 1.0 - Term 43688 - 43743 4.2 55 20 Op 1 . - CDS 43765 - 45939 1924 ## COG3345 Alpha-galactosidase 56 20 Op 2 . - CDS 45982 - 46422 289 ## 57 20 Op 3 . - CDS 46415 - 47719 1203 ## COG1455 Phosphotransferase system cellobiose-specific component IIC - Prom 47814 - 47873 8.5 + Prom 47732 - 47791 15.7 58 21 Op 1 . + CDS 47845 - 48705 648 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 48743 - 48802 8.6 59 21 Op 2 . + CDS 48832 - 50676 2414 ## COG1217 Predicted membrane GTPase involved in stress response + Term 50679 - 50705 0.3 + Prom 50693 - 50752 6.0 60 22 Tu 1 . + CDS 50932 - 51204 284 ## GALLO_0598 hypothetical protein + Prom 51240 - 51299 7.4 61 23 Op 1 4/0.056 + CDS 51327 - 52682 1862 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 62 23 Op 2 3/0.056 + CDS 52685 - 53761 1185 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 63 23 Op 3 25/0.000 + CDS 53762 - 55042 1460 ## COG1589 Cell division septal protein + Term 55056 - 55115 3.2 + Prom 55080 - 55139 9.8 64 24 Op 1 35/0.000 + CDS 55178 - 56542 1646 ## COG0849 Actin-like ATPase involved in cell division 65 24 Op 2 4/0.056 + CDS 56563 - 57885 2057 ## COG0206 Cell division GTPase 66 24 Op 3 14/0.000 + CDS 57885 - 58559 666 ## COG0325 Predicted enzyme with a TIM-barrel fold 67 24 Op 4 12/0.000 + CDS 58574 - 59182 669 ## COG1799 Uncharacterized protein conserved in bacteria 68 24 Op 5 7/0.000 + CDS 59186 - 59440 214 ## COG0762 Predicted integral membrane protein 69 24 Op 6 6/0.000 + CDS 59442 - 60233 550 ## PROTEIN SUPPORTED gi|15901497|ref|NP_346101.1| ylmH protein 70 24 Op 7 6/0.000 + CDS 60244 - 61011 1216 ## COG3599 Cell division initiation protein + Term 61205 - 61246 4.7 + Prom 61085 - 61144 2.1 71 24 Op 8 . + CDS 61322 - 64120 3628 ## COG0060 Isoleucyl-tRNA synthetase + Term 64154 - 64187 4.0 - Term 64130 - 64186 12.0 72 25 Op 1 . - CDS 64222 - 64524 314 ## GALLO_0610 hypothetical protein 73 25 Op 2 1/0.278 - CDS 64596 - 65042 618 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 65108 - 65167 7.3 - Term 65266 - 65308 7.1 74 26 Tu 1 . - CDS 65321 - 67609 1658 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 67675 - 67734 7.4 75 27 Op 1 . - CDS 67751 - 68278 430 ## GALLO_0613 hypothetical protein 76 27 Op 2 . - CDS 68306 - 68515 122 ## COG1476 Predicted transcriptional regulators - Prom 68759 - 68818 7.3 + Prom 68749 - 68808 13.8 77 28 Op 1 . + CDS 68850 - 69830 1294 ## COG0078 Ornithine carbamoyltransferase + Prom 69880 - 69939 4.7 78 28 Op 2 . + CDS 69965 - 70195 395 ## COG4703 Uncharacterized protein conserved in bacteria + Term 70287 - 70329 4.2 + Prom 70367 - 70426 8.5 79 29 Op 1 34/0.000 + CDS 70449 - 71135 823 ## COG0765 ABC-type amino acid transport system, permease component 80 29 Op 2 . + CDS 71135 - 71869 256 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 71883 - 71924 8.0 + Prom 72076 - 72135 9.6 81 30 Op 1 22/0.000 + CDS 72236 - 72712 574 ## COG1918 Fe2+ transport system protein A 82 30 Op 2 . + CDS 72709 - 74847 2453 ## COG0370 Fe2+ transport system protein B 83 30 Op 3 . + CDS 74852 - 74992 67 ## GALLO_0621 hypothetical protein + Term 75007 - 75039 4.0 + Prom 75059 - 75118 6.7 84 31 Op 1 . + CDS 75139 - 75993 1155 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 85 31 Op 2 . + CDS 75990 - 76826 333 ## PROTEIN SUPPORTED gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 + Term 76832 - 76892 15.5 + Prom 76910 - 76969 12.5 86 32 Op 1 . + CDS 77063 - 77686 499 ## GALLO_0624 conserved hypothetical lipoprotein 87 32 Op 2 . + CDS 77707 - 80709 2851 ## GALLO_0625 putative cell wall associated protein + Term 80731 - 80777 8.2 88 33 Tu 1 . + CDS 80784 - 81335 343 ## COG1376 Uncharacterized protein conserved in bacteria + Prom 81575 - 81634 7.6 89 34 Op 1 14/0.000 + CDS 81684 - 83012 1679 ## COG1570 Exonuclease VII, large subunit 90 34 Op 2 22/0.000 + CDS 83002 - 83217 329 ## COG1722 Exonuclease VII small subunit 91 34 Op 3 3/0.056 + CDS 83217 - 84086 1171 ## COG0142 Geranylgeranyl pyrophosphate synthase 92 34 Op 4 6/0.000 + CDS 84079 - 84903 995 ## COG1189 Predicted rRNA methylase 93 34 Op 5 8/0.000 + CDS 84890 - 85360 625 ## COG1438 Arginine repressor 94 34 Op 6 . + CDS 85374 - 87032 1987 ## COG0497 ATPase involved in DNA repair + Term 87037 - 87064 0.1 + Prom 87075 - 87134 5.6 95 35 Op 1 2/0.056 + CDS 87169 - 88005 1030 ## COG1307 Uncharacterized protein conserved in bacteria 96 35 Op 2 3/0.056 + CDS 87998 - 88846 854 ## COG2755 Lysophospholipase L1 and related esterases 97 35 Op 3 2/0.056 + CDS 88875 - 89417 626 ## COG4698 Uncharacterized protein conserved in bacteria + Prom 89424 - 89483 3.0 98 35 Op 4 . + CDS 89512 - 89787 172 ## PROTEIN SUPPORTED gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 + Term 89801 - 89851 1.0 + Prom 89795 - 89854 5.7 99 36 Tu 1 . + CDS 89974 - 90180 308 ## GALLO_0637 hypothetical protein + Term 90190 - 90214 -1.0 + Prom 90459 - 90518 7.6 100 37 Tu 1 . + CDS 90584 - 92077 1417 ## COG3104 Dipeptide/tripeptide permease + Term 92134 - 92187 8.4 - Term 92129 - 92165 3.5 101 38 Op 1 . - CDS 92185 - 93120 811 ## COG0167 Dihydroorotate dehydrogenase 102 38 Op 2 . - CDS 93220 - 94215 993 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 94315 - 94374 9.1 + Prom 94266 - 94325 8.8 103 39 Op 1 5/0.000 + CDS 94383 - 94697 330 ## COG0640 Predicted transcriptional regulators 104 39 Op 2 . + CDS 94700 - 96583 1633 ## COG2217 Cation transport ATPase + Term 96688 - 96729 5.1 + Prom 96661 - 96720 6.4 105 40 Tu 1 . + CDS 96743 - 97063 412 ## COG2076 Membrane transporters of cations and cationic drugs + Term 97072 - 97116 2.1 + Prom 97115 - 97174 7.6 106 41 Tu 1 . + CDS 97280 - 97972 1088 ## COG0588 Phosphoglycerate mutase 1 + Term 98010 - 98055 9.0 - Term 98001 - 98039 1.1 107 42 Op 1 12/0.000 - CDS 98120 - 98269 115 ## COG0582 Integrase - Prom 98291 - 98350 1.9 108 42 Op 2 . - CDS 98353 - 99282 490 ## COG0582 Integrase - Prom 99328 - 99387 3.1 109 43 Tu 1 . - CDS 99399 - 99953 463 ## - Prom 100000 - 100059 5.6 + Prom 99896 - 99955 5.3 110 44 Tu 1 . + CDS 100068 - 100253 305 ## gi|77410867|ref|ZP_00787224.1| repressor-related protein + Term 100481 - 100515 -0.9 + Prom 100430 - 100489 6.2 111 45 Op 1 . + CDS 100594 - 100905 357 ## MGAS10270_Spy1945 phage protein 112 45 Op 2 . + CDS 100909 - 101055 102 ## 113 45 Op 3 . + CDS 101118 - 101384 247 ## MGAS10270_Spy1943 phage protein 114 45 Op 4 . + CDS 101389 - 101937 211 ## GALLO_2139 hypothetical protein 115 45 Op 5 . + CDS 101912 - 103315 892 ## COG5545 Predicted P-loop ATPase and inactivated derivatives + Prom 103425 - 103484 10.7 116 46 Op 1 . + CDS 103707 - 104141 411 ## + Prom 104150 - 104209 7.9 117 46 Op 2 . + CDS 104353 - 104535 96 ## + Term 104561 - 104606 3.4 + Prom 104539 - 104598 5.3 118 47 Op 1 . + CDS 104632 - 105210 655 ## 119 47 Op 2 . + CDS 105207 - 105497 96 ## 120 47 Op 3 . + CDS 105467 - 105850 208 ## SP_1140 hypothetical protein 121 47 Op 4 . + CDS 105825 - 106205 82 ## SP_1141 hypothetical protein 122 47 Op 5 . + CDS 106223 - 106603 247 ## SPH_0094 hypothetical protein + Prom 106660 - 106719 3.2 123 48 Tu 1 . + CDS 106741 - 106950 193 ## + Term 106955 - 106993 -0.6 - Term 107175 - 107213 1.3 124 49 Tu 1 . - CDS 107221 - 107760 282 ## - Prom 107790 - 107849 6.7 + Prom 107749 - 107808 8.5 125 50 Op 1 . + CDS 108001 - 108228 395 ## SSU98_0615 hypothetical protein 126 50 Op 2 . + CDS 108218 - 108487 261 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 127 50 Op 3 . + CDS 108534 - 108620 77 ## 128 51 Tu 1 . - CDS 108867 - 109433 438 ## GALLO_0645 putative transcriptional regulator - Prom 109655 - 109714 5.6 + Prom 109548 - 109607 6.9 129 52 Tu 1 . + CDS 109684 - 110205 605 ## COG1827 Predicted small molecule binding protein (contains 3H domain) + Term 110209 - 110245 4.5 + Prom 110284 - 110343 6.0 130 53 Tu 1 . + CDS 110402 - 110956 642 ## GALLO_0647 hypothetical protein + Prom 110968 - 111027 5.9 131 54 Op 1 2/0.056 + CDS 111111 - 113264 2778 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 113278 - 113319 2.8 132 54 Op 2 3/0.056 + CDS 113330 - 113926 744 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 113930 - 113973 5.1 + Prom 113974 - 114033 7.4 133 55 Tu 1 . + CDS 114164 - 115210 1465 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Term 115221 - 115273 5.6 - Term 115266 - 115306 4.1 134 56 Tu 1 . - CDS 115315 - 115875 455 ## GALLO_0651 hypothetical protein - Prom 116068 - 116127 6.7 + Prom 116027 - 116086 8.0 135 57 Op 1 . + CDS 116119 - 117483 1733 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 136 57 Op 2 . + CDS 117514 - 118650 734 ## GALLO_0653 putative oligosaccharide repeat unit polymerase + Term 118678 - 118714 3.5 + Prom 118718 - 118777 2.7 137 57 Op 3 . + CDS 118801 - 120345 2179 ## COG4108 Peptide chain release factor RF-3 + Term 120350 - 120399 12.3 + Prom 120522 - 120581 5.6 138 58 Tu 1 . + CDS 120747 - 122327 1906 ## COG0513 Superfamily II DNA and RNA helicases + Term 122329 - 122379 11.9 - Term 122323 - 122359 2.2 139 59 Op 1 6/0.000 - CDS 122371 - 122643 285 ## COG2827 Predicted endonuclease containing a URI domain 140 59 Op 2 . - CDS 122618 - 123379 659 ## COG4123 Predicted O-methyltransferase - Prom 123443 - 123502 5.5 + Prom 123236 - 123295 5.5 141 60 Op 1 1/0.278 + CDS 123487 - 124233 909 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 124243 - 124276 2.0 + Prom 124243 - 124302 6.1 142 60 Op 2 4/0.056 + CDS 124328 - 124993 762 ## COG1555 DNA uptake protein and related DNA-binding proteins + Term 125038 - 125087 3.2 + Prom 124996 - 125055 5.9 143 61 Op 1 4/0.056 + CDS 125244 - 127217 1257 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 144 61 Op 2 2/0.056 + CDS 127267 - 128328 962 ## COG1466 DNA polymerase III, delta subunit + Prom 128334 - 128393 5.4 145 61 Op 3 . + CDS 128417 - 129025 892 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 129087 - 129137 7.1 + Prom 129027 - 129086 6.0 146 62 Tu 1 . + CDS 129177 - 129902 1153 ## COG0217 Uncharacterized conserved protein + Term 129906 - 129937 3.1 - Term 129888 - 129931 9.2 147 63 Tu 1 . - CDS 129934 - 130962 1217 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 130990 - 131049 8.3 + Prom 131016 - 131075 7.6 148 64 Tu 1 . + CDS 131138 - 131638 582 ## GALLO_0665 hypothetical protein + Term 131644 - 131679 4.1 + Prom 131662 - 131721 9.6 149 65 Op 1 1/0.278 + CDS 131767 - 132471 993 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 132482 - 132515 1.4 150 65 Op 2 1/0.278 + CDS 132547 - 133263 660 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 151 65 Op 3 7/0.000 + CDS 133317 - 134288 568 ## COG4469 Competence protein 152 65 Op 4 . + CDS 134278 - 136080 1989 ## COG1164 Oligoendopeptidase F + Term 136089 - 136125 4.0 153 66 Op 1 . + CDS 136154 - 136672 497 ## COG3981 Predicted acetyltransferase 154 66 Op 2 . + CDS 136694 - 137305 706 ## COG0546 Predicted phosphatases 155 66 Op 3 3/0.056 + CDS 137359 - 138060 672 ## COG4122 Predicted O-methyltransferase 156 66 Op 4 3/0.056 + CDS 138129 - 139235 1418 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 157 67 Op 1 . + CDS 139605 - 142223 3581 ## COG0013 Alanyl-tRNA synthetase 158 67 Op 2 . + CDS 142269 - 142457 253 ## GALLO_0675 hypothetical protein + Term 142465 - 142494 2.1 + Prom 142467 - 142526 7.1 159 68 Tu 1 . + CDS 142586 - 143566 509 ## gi|171779582|ref|ZP_02920538.1| hypothetical protein STRINF_01419 + Term 143574 - 143603 2.1 + Prom 143615 - 143674 8.6 160 69 Op 1 1/0.278 + CDS 143718 - 144500 935 ## COG0388 Predicted amidohydrolase 161 69 Op 2 . + CDS 144512 - 145690 1276 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 145692 - 145735 3.6 + Prom 145793 - 145852 8.3 162 70 Op 1 . + CDS 145891 - 146724 776 ## COG1131 ABC-type multidrug transport system, ATPase component 163 70 Op 2 . + CDS 146714 - 147406 582 ## GALLO_0679 putative ABC transporter, permease protein + Term 147433 - 147472 4.7 + Prom 147460 - 147519 10.3 164 71 Op 1 11/0.000 + CDS 147544 - 148566 1159 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 165 71 Op 2 10/0.000 + CDS 148637 - 149830 1540 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 166 71 Op 3 13/0.000 + CDS 149844 - 150578 819 ## COG0548 Acetylglutamate kinase 167 71 Op 4 . + CDS 150604 - 151734 1319 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 151741 - 151783 6.3 + Prom 151754 - 151813 7.8 168 72 Tu 1 . + CDS 151833 - 152390 718 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) + Term 152408 - 152447 3.8 + Prom 152440 - 152499 7.5 169 73 Tu 1 . + CDS 152527 - 153408 1102 ## COG0583 Transcriptional regulator + Term 153447 - 153477 1.3 + Prom 153500 - 153559 10.2 170 74 Op 1 . + CDS 153590 - 154150 750 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 171 74 Op 2 . + CDS 154168 - 154461 558 ## ECA1484 hypothetical protein 172 74 Op 3 . + CDS 154486 - 155340 1123 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 155410 - 155461 8.1 + Prom 155498 - 155557 6.7 173 75 Op 1 . + CDS 155632 - 156741 1498 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 174 75 Op 2 1/0.278 + CDS 156759 - 157436 1048 ## COG0693 Putative intracellular protease/amidase + Term 157493 - 157526 2.4 + Prom 157489 - 157548 3.7 175 76 Op 1 . + CDS 157568 - 158047 635 ## COG0789 Predicted transcriptional regulators 176 76 Op 2 . + CDS 158137 - 159060 812 ## COG3238 Uncharacterized protein conserved in bacteria + Term 159131 - 159172 4.6 + Prom 159196 - 159255 14.7 177 77 Op 1 . + CDS 159275 - 159640 320 ## COG1476 Predicted transcriptional regulators 178 77 Op 2 . + CDS 159637 - 160404 688 ## GALLO_0691 conserved hypothetical membrane spanning protein + Term 160490 - 160524 -0.1 + Prom 160754 - 160813 3.8 179 78 Op 1 16/0.000 + CDS 160925 - 161980 1091 ## COG0117 Pyrimidine deaminase 180 78 Op 2 15/0.000 + CDS 161980 - 162582 485 ## COG0307 Riboflavin synthase alpha chain 181 78 Op 3 18/0.000 + CDS 162583 - 163761 1047 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 182 78 Op 4 . + CDS 163773 - 164234 706 ## COG0054 Riboflavin synthase beta-chain + Term 164259 - 164292 2.1 + Prom 164308 - 164367 5.1 183 79 Tu 1 . + CDS 164560 - 165093 775 ## GALLO_0696 putative serine rich lipoprotein + Term 165124 - 165168 8.4 184 80 Tu 1 . - CDS 165369 - 166229 1097 ## COG0583 Transcriptional regulator - Prom 166259 - 166318 8.1 + Prom 166240 - 166299 5.3 185 81 Tu 1 . + CDS 166414 - 167274 1223 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 167284 - 167315 2.1 + Prom 167289 - 167348 6.3 186 82 Tu 1 . + CDS 167429 - 168292 917 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 168447 - 168484 3.4 + Prom 168470 - 168529 7.5 187 83 Op 1 . + CDS 168557 - 169471 791 ## COG0598 Mg2+ and Co2+ transporters 188 83 Op 2 . + CDS 169490 - 170056 541 ## COG3548 Predicted integral membrane protein - Term 170047 - 170075 -0.9 189 84 Tu 1 . - CDS 170086 - 170652 692 ## COG3859 Predicted membrane protein - Prom 170829 - 170888 5.4 190 85 Tu 1 . - CDS 170920 - 171882 1165 ## COG0208 Ribonucleotide reductase, beta subunit - Term 172100 - 172145 1.5 191 86 Op 1 2/0.056 - CDS 172330 - 174489 1881 ## COG0209 Ribonucleotide reductase, alpha subunit 192 86 Op 2 . - CDS 174555 - 174782 344 ## COG0695 Glutaredoxin and related proteins + Prom 174983 - 175042 9.7 193 87 Op 1 3/0.056 + CDS 175070 - 177733 3077 ## COG1048 Aconitase A 194 87 Op 2 4/0.056 + CDS 177737 - 178855 1534 ## COG0372 Citrate synthase 195 87 Op 3 . + CDS 178884 - 180059 1549 ## COG0538 Isocitrate dehydrogenases + Term 180068 - 180103 4.0 196 88 Tu 1 . + CDS 180139 - 180942 698 ## COG4905 Predicted membrane protein + Prom 181148 - 181207 5.7 197 89 Op 1 2/0.056 + CDS 181232 - 182041 722 ## COG0561 Predicted hydrolases of the HAD superfamily 198 89 Op 2 . + CDS 182042 - 182965 878 ## COG1609 Transcriptional regulators 199 89 Op 3 . + CDS 183004 - 183798 709 ## COG1434 Uncharacterized conserved protein 200 89 Op 4 . + CDS 183870 - 184250 620 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 184313 - 184353 5.2 - Term 184293 - 184348 13.5 201 90 Op 1 2/0.056 - CDS 184351 - 186948 2781 ## COG3581 Uncharacterized protein conserved in bacteria 202 90 Op 2 . - CDS 186964 - 188739 2171 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 188921 - 188980 5.0 + Prom 188872 - 188931 6.7 203 91 Tu 1 . + CDS 189032 - 189643 598 ## COG1309 Transcriptional regulator + Prom 189738 - 189797 6.6 204 92 Op 1 . + CDS 189832 - 190107 310 ## GALLO_1066 hypothetical protein 205 92 Op 2 . + CDS 190109 - 190417 461 ## GALLO_1067 hypothetical protein 206 92 Op 3 . + CDS 190407 - 192104 1456 ## GALLO_1068 hypothetical protein 207 92 Op 4 . + CDS 192108 - 192719 476 ## GALLO_1070 hypothetical protein 208 92 Op 5 . + CDS 192758 - 193366 531 ## GALLO_1069 hypothetical protein + Prom 193422 - 193481 5.7 209 93 Op 1 . + CDS 193510 - 194274 839 ## COG4420 Predicted membrane protein 210 93 Op 2 . + CDS 194300 - 195664 1371 ## GALLO_0719 hypothetical protein + Term 195695 - 195731 1.0 + Prom 195822 - 195881 8.8 211 94 Op 1 . + CDS 195993 - 197993 1154 ## COG0451 Nucleoside-diphosphate-sugar epimerases 212 94 Op 2 . + CDS 198007 - 198906 828 ## GALLO_0721 hypothetical protein 213 94 Op 3 1/0.278 + CDS 198926 - 200752 1574 ## COG4878 Uncharacterized protein conserved in bacteria 214 94 Op 4 4/0.056 + CDS 200781 - 202181 980 ## COG0438 Glycosyltransferase 215 94 Op 5 . + CDS 202181 - 203662 1180 ## COG4267 Predicted membrane protein 216 94 Op 6 . + CDS 203652 - 205430 1701 ## GALLO_0725 conserved hypothetical secreted protein 217 94 Op 7 . + CDS 205417 - 206145 658 ## GALLO_0726 hypothetical protein 218 94 Op 8 . + CDS 206172 - 206837 806 ## GALLO_0727 hypothetical protein 219 94 Op 9 . + CDS 206872 - 207885 1195 ## COG1087 UDP-glucose 4-epimerase + Term 207906 - 207947 3.0 + Prom 207977 - 208036 8.2 220 95 Op 1 12/0.000 + CDS 208058 - 208948 1051 ## COG1660 Predicted P-loop-containing kinase 221 95 Op 2 12/0.000 + CDS 208945 - 209922 939 ## COG0391 Uncharacterized conserved protein 222 95 Op 3 . + CDS 209919 - 210830 966 ## COG1481 Uncharacterized protein conserved in bacteria 223 95 Op 4 . + CDS 210853 - 212250 1849 ## COG4690 Dipeptidase + Term 212259 - 212299 7.4 + Prom 212289 - 212348 10.2 224 96 Op 1 . + CDS 212420 - 213286 717 ## COG1396 Predicted transcriptional regulators 225 96 Op 2 . + CDS 213290 - 214375 750 ## GALLO_0736 putative transporter + Term 214403 - 214441 3.1 + Prom 214451 - 214510 15.9 226 97 Tu 1 . + CDS 214544 - 216058 1980 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 216087 - 216125 4.3 + Prom 216308 - 216367 5.0 227 98 Op 1 . + CDS 216422 - 217156 845 ## GALLO_0738 hypothetical protein 228 98 Op 2 . + CDS 217179 - 217871 735 ## GALLO_0739 hypothetical protein + Term 217874 - 217921 2.6 + Prom 217891 - 217950 4.0 229 99 Op 1 3/0.056 + CDS 218004 - 218759 594 ## COG0500 SAM-dependent methyltransferases 230 99 Op 2 1/0.278 + CDS 218772 - 219119 499 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 231 99 Op 3 . + CDS 219112 - 219420 263 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Prom 219423 - 219482 6.1 232 99 Op 4 . + CDS 219505 - 220221 757 ## COG1705 Muramidase (flagellum-specific) + Term 220224 - 220266 5.2 - Term 220542 - 220586 7.2 233 100 Op 1 . - CDS 220714 - 221253 309 ## SDEG_0289 hypothetical protein - Prom 221365 - 221424 2.7 234 100 Op 2 . - CDS 221426 - 222682 1230 ## SDEG_0288 recombination protein - Prom 222794 - 222853 5.0 235 101 Op 1 . - CDS 223000 - 223434 244 ## SDEG_0287 hypothetical protein 236 101 Op 2 . - CDS 223492 - 224343 383 ## SAK_0284 replication initiation factor family protein - Prom 224541 - 224600 3.7 237 102 Op 1 . - CDS 224635 - 225273 367 ## gbs0216 hypothetical protein 238 102 Op 2 . - CDS 225278 - 225604 436 ## gbs0215 hypothetical protein 239 102 Op 3 . - CDS 225612 - 225890 335 ## SDEG_0282 hypothetical protein - Prom 225949 - 226008 14.4 + Prom 225940 - 225999 11.3 240 103 Op 1 . + CDS 226023 - 226622 618 ## gbs0212 hypothetical protein 241 103 Op 2 . + CDS 226677 - 227834 488 ## COG0582 Integrase + Term 227927 - 227965 -0.4 242 104 Tu 1 . - CDS 227936 - 228181 390 ## PROTEIN SUPPORTED gi|15901159|ref|NP_345763.1| 50S ribosomal protein L31 type B - Prom 228239 - 228298 5.5 243 105 Op 1 . - CDS 228341 - 229285 1152 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B 244 105 Op 2 . - CDS 229282 - 229410 111 ## + Prom 229624 - 229683 11.0 245 106 Op 1 25/0.000 + CDS 229741 - 230004 526 ## COG1925 Phosphotransferase system, HPr-related proteins 246 106 Op 2 1/0.278 + CDS 230009 - 231742 2213 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 231761 - 231806 9.0 + Prom 231919 - 231978 6.6 247 107 Tu 1 . + CDS 232145 - 233575 1972 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 233579 - 233629 7.2 + Prom 233642 - 233701 5.8 248 108 Tu 1 . + CDS 233759 - 235402 1734 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Term 235429 - 235478 5.1 + Prom 235435 - 235494 10.2 249 109 Tu 1 . + CDS 235708 - 240429 5578 ## COG1404 Subtilisin-like serine proteases + Term 240469 - 240516 4.0 - Term 240264 - 240316 -0.9 250 110 Tu 1 . - CDS 240525 - 241610 1178 ## COG0513 Superfamily II DNA and RNA helicases - Prom 241637 - 241696 6.1 + Prom 241667 - 241726 9.9 251 111 Tu 1 . + CDS 241763 - 242383 809 ## COG0572 Uridine kinase + Term 242406 - 242440 6.0 + Prom 242514 - 242573 5.9 252 112 Op 1 11/0.000 + CDS 242768 - 244330 1989 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 253 112 Op 2 . + CDS 244381 - 245418 1139 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 254 112 Op 3 . + CDS 245415 - 245693 139 ## COG3326 Predicted membrane protein 255 112 Op 4 30/0.000 + CDS 245739 - 247127 1585 ## COG0065 3-isopropylmalate dehydratase large subunit 256 112 Op 5 . + CDS 247140 - 247730 694 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 247779 - 247834 11.0 + Prom 247750 - 247809 4.0 257 113 Op 1 2/0.056 + CDS 247882 - 248379 543 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 258 113 Op 2 . + CDS 248379 - 250058 1745 ## COG2812 DNA polymerase III, gamma/tau subunits Predicted protein(s) >gi|304426803|gb|AEEM01000011.1| GENE 1 2 - 589 519 195 aa, chain + ## HITS:1 COG:no KEGG:SSA_2277 NR:ns ## KEGG: SSA_2277 # Name: not_defined # Def: DNA segregation ATPase FtsK/SpoIIIE family protein, putative # Organism: S.sanguinis # Pathway: not_defined # 1 194 1278 1471 1474 177 45.0 2e-43 VSISLNHFRQLAYVADNNEALDSITRHLLNLITHLDFNASVMLLDSDQNYKDYAGIVQTY INDATDFEDMNEQLIYEVKKRQKNGQWKEWFIILPNLESYLNLSQENLEQWTFLLTEAHK VGMYLIIGGLYQYLGIKTTDVPKAIRTQVPYFILGMRLIDQNFLDKVYNSKEQRLADDEI YLHDRKSSQKLKITS >gi|304426803|gb|AEEM01000011.1| GENE 2 602 - 958 300 118 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTIQSDSLTASQYATQITSSGSSVSGIGTVSKDNETTLSGNNNAHSAIDLDDATGTQIAS VLSTFVSLIHSTASEFEAVDNQISQQLGATTSATTLPSSSKSSTSPTFTPNTSLFGGS >gi|304426803|gb|AEEM01000011.1| GENE 3 961 - 1362 425 133 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKATDRTVDDVLREEKNINYHLEDLEQEKRRLVRFEEETENVFGENLSQLRELENFSLNS RDREDLDNIILSYDYTRRFIVSDIDDYQETLRKHESKLYDRLEALSRERQELYRKEEERK ENAHGKNVPREFD >gi|304426803|gb|AEEM01000011.1| GENE 4 1331 - 2770 1613 479 aa, chain + ## HITS:1 COG:no KEGG:lwe1939 NR:ns ## KEGG: lwe1939 # Name: not_defined # Def: hypothetical protein # Organism: L.welshimeri # Pathway: not_defined # 2 218 3 223 474 129 37.0 2e-28 MVKMSLGNSTSQGSSTSSISSSRISAYNGAISSLNSFIGASNLQGDAYSSAKSYASTVLI PLIQGAILLSEAVSNAVTTFPNRYTSEVAGESLDSEVLEAQIATYQAAYDRSSAWLTSEM SKKVLNESSILRAQQSMARNLGKVTELQEKLDKLMAFNASSPSLFDEISGLYSAVSQGLS QVNNSFSSYNGTFSLPSQEELAWTTTITTAWEEREANSASEEFDETIANIAEESGLTVEE VMAYVLYGKKPISYTKKAQKILATAIKYQKGKAFLKGKEITVEKVYAGTSRESTRVRWNG KPLYDQETDQLFKSGKDLKEASEIDISKTRYAWTAEGNINFSEMGKAGWSSFKSAIDPLS DFKGWKDASNVTKAGKVLGIAGTAMTVINNVNADFINADGGINSAQNWGNFAVDTGVDLA SGAGAAAIGAAAGSLVAPPLGTVVGAGVGMLVSWGMNQDWGGGKSVTTWAKDSLKGLFN >gi|304426803|gb|AEEM01000011.1| GENE 5 3063 - 3431 252 122 aa, chain + ## HITS:1 COG:no KEGG:SAG1020 NR:ns ## KEGG: SAG1020 # Name: not_defined # Def: putative lipoprotein # Organism: S.agalactiae # Pathway: not_defined # 1 119 103 227 227 85 46.0 6e-16 MFTNANINYDNVYSWYALLYIIVMLVTIIVSSAYYVYCYKIKKERVLGYGGEAKKKENSH LLNYGIIFGVVLIAPSLLTGHIQNLFGVLLGLLFSVVFPGLIVDSFYAAYLIHKHPEYKE KR >gi|304426803|gb|AEEM01000011.1| GENE 6 3435 - 3911 417 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|288731502|emb|CBI13056.1| ## NR: gi|288731502|emb|CBI13056.1| hypothetical protein [Streptococcus gallolyticus UCN34] # 1 157 1 149 152 108 41.0 2e-22 MELKTKYLALSNQIGYETTIPEKWTSEQLCQEVFKSSQNFIFQMLEQGFYSDGPTYFAIN PFKAGERGFFSKKKRITIFTTFGNDFQKLGENKSSIIFTEHKLVKSDDYTRLSPAELDQY YRELSSKYNEEQLENTLVYHVLFYQDDDLLIDVYSEVM >gi|304426803|gb|AEEM01000011.1| GENE 7 3914 - 4369 383 151 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0565 NR:ns ## KEGG: GALLO_0565 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 151 1 151 151 186 60.0 2e-46 MGYRVAEGVRNRDSFFVENVVRKRQTFHISEMTERLDSFMNAVQALGLHPNDTLFYSLNN TPYDENVDIEFFLPVKETYVESDEFIFSSYFEMNNMILTTVDNNYETLTEVAYARLLWTL EANNKEIRTPFYHILPTDGSGQVIVFLGYAY >gi|304426803|gb|AEEM01000011.1| GENE 8 4603 - 5100 229 165 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477768|ref|ZP_04062397.1| ## NR: gi|228477768|ref|ZP_04062397.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 4 165 11 171 171 63 29.0 3e-09 MFIWIIVVVLTWLPIIFCLYMWRREYIIRKYSTSEIVGRVSSHKEWDSLRPPIVEYEVDG NRYTKLLEYELVTYRPSDISYPQDLESLRSFMIKHKRLHNINLMPYNMYQIYPVGYKMIV KYNPKKPKLAYVERYAGGESLYRAISIFLIVMLLLVDFLILWVAL >gi|304426803|gb|AEEM01000011.1| GENE 9 5156 - 5332 70 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKNIFNVKFKDSLNLYDDAIISFALNNFLKEVETEEKMANSSKIVLTMSYLAYMELK >gi|304426803|gb|AEEM01000011.1| GENE 10 5336 - 5500 58 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDSRNLILYFILASCILGFSLIFFSVWKREKNIRDKCTENIKGNVVGYKKMGVC >gi|304426803|gb|AEEM01000011.1| GENE 11 5490 - 5846 135 118 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477768|ref|ZP_04062397.1| ## NR: gi|228477768|ref|ZP_04062397.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 6 117 59 169 171 67 36.0 4e-10 MSVRPPIIEYTVDNHVYHTFLKYTAAISGPTPARYPSNKEELRKLLLDSTIIRNFNALPY QLPELFPIGSELTVYYNPQNPKISYVERYVGLIQFFKWVWIISAGIFILITIIFLWII >gi|304426803|gb|AEEM01000011.1| GENE 12 5948 - 6175 211 75 aa, chain + ## HITS:1 COG:no KEGG:SGO_0072 NR:ns ## KEGG: SGO_0072 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 75 221 295 295 69 44.0 4e-11 MELSDNITFLSFLVLILALNSIVAVFEIYLILPYLLTGYYKLKYPEEYRNWEGKTKTKFY GNSYLKKHKELTEND >gi|304426803|gb|AEEM01000011.1| GENE 13 6200 - 6283 86 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MESIKLIGKNVSNFFNGGAKTVSSWFG >gi|304426803|gb|AEEM01000011.1| GENE 14 6292 - 7080 262 262 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEEYKIIIDRAYVAMKKWNIFYILVIFPIGISFFLFAAYLIPSFGKSVSQTDYFKVNNI TMFESKLGISDNVLIFSFLCFWILYIIVYIMSKRNRIKAYLLNQIVFLGLILLVYYAMFY GCQFFVNFFFLRMLYWMLFLVSIVYTGYSVFDQLAPDIHLILKINPKIFTNVLLIFWGVS AILNLFMKGFNHFLARILLAVLPITPILLVLAFTGVVHSQVTLIKTLNVINKNQEKYRQE FGYSVKDWYGKKSKMYKESLKN >gi|304426803|gb|AEEM01000011.1| GENE 15 7102 - 7938 503 278 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKTLFNASLEESMNLVTDKYIQTSMEDINEKGYWRKIIGFFTVLFFSVCLHGGISVFKN NAGIDFTLLSYIIMVVNIYSVVRYLLDVRKIKNNRILSYYYYNKDIFLLVFGLALQTTLI SIAGATMVLGKILANILYGLVFLFIFLERYQWFKRDTLKALYGQQSFNNPLARFLDYFVT FSKKYGGIVVLLLFIVQFFLPGSGKSDIYHNDVIRNVVLMFSPLLFVLGFYFVIALGADN FQGYYLQKYLEDYRQLSDYSIEEWYGKKSKMYKESLKK >gi|304426803|gb|AEEM01000011.1| GENE 16 7960 - 8814 298 284 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKTLFNASLEESMNLVTDKYIQTSMEDINEKGYWRKIIGSFTMILFILMFHVVAVVLEE SHADTVVMKQSNLTPIWIVLSLGIVINYFRNIAKVKNDRILSYYYYNNSMAALVGVFLLQ IIIMFIVLSVSVTDNFLPLILYPILFLAIIISRVVSISKKIKRILYQSEKNNNRVARFLE QFVVFSRKYGWLVVLILYFLRNYFKYTPSETATAGEFDTLQIIGGWLCPLMMILPLYFMF ALVEDNFQGYYLQKYLEDYRQLTDYSIEEWYGKKSKMYKESLKK >gi|304426803|gb|AEEM01000011.1| GENE 17 8836 - 9645 352 269 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228478345|ref|ZP_04062953.1| ## NR: gi|228478345|ref|ZP_04062953.1| putative membrane protein [Streptococcus salivarius SK126] # 1 263 1 257 261 142 33.0 2e-32 MQLFKFSFEESEYIVDEAYVKRTYQPSKKKRFIGMFLLALLLYIGLVMLPMLMQILMINN PQNLKLNFLNIPILVLIVLFYSSYVFLSVKNFRRNFIKKYLTYFYITLSLIVLMFIFEIV ELSQFLEGGVFVPVLSFSIFIITIYYTQYRLHKGIKQSVKNKEMFNSIAYILSEKVGIIL LILGSSGLPALIAIANIYSNGSVNRGIDAILEPFIPTIIYLGVYFLMIESYKGYYVVKYF EQYRVKFGYSIEEWYGKNSKEYKESLKKG >gi|304426803|gb|AEEM01000011.1| GENE 18 9710 - 10678 891 322 aa, chain + ## HITS:1 COG:no KEGG:SSA_1597 NR:ns ## KEGG: SSA_1597 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 95 315 97 307 322 66 26.0 2e-09 MKKRERFILGGLCFLLLTMIFGAWAYNGYQNHQDKVASSSSSNPSKSYTTTGSLKLPEYY TFGANNEYVITDDYVLVGQDYILTFKRKLLDSSEDYSYRESGEYLKFAYQKIDGDSSSRQ TVNLSQLANGYKKGYYLKLNTYVMNYQGVDYLICFIGKDDSEDSSDWLALAYNLESGKLT EVETAMQDVSTDATYFKQNGVYQMSLYQPLKQTNTYNYLTSNNFDVKFNIKLYSDDNNSE DINLFSENSSLQAQIDAGKDVYIYPRYNQVTPEMWFNDVLHWFAPSGQETLTVYMKDGSD TVKSTPITSYADYLALENEEAS >gi|304426803|gb|AEEM01000011.1| GENE 19 10724 - 11116 583 130 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKSFEEMTFDELKLYRREGLWRSLSILLVAIVVIICMIVMTVNHVSQSNLYCFRTLGTV IILALLGYLRTIANANKVMREHPDWIRKSGMGAHIPLPREWHLKRALVIGIALIAVIIGF IAYYHPQHIQ >gi|304426803|gb|AEEM01000011.1| GENE 20 11245 - 11730 378 161 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEEHKQISVEEYRQLRKEVGNWQIAIILFGLFIFILGALLIAQGSRYFILMYSSIAVMFG MASIGLFPLSRIVQSCDKANPNLRKLKLNDVKVPKHYRNKRLLILGGGFLIVLLTFCSQF DFERGLNEPDRVQTPPSLINNSTSSLIDDAKDVLEEENANE >gi|304426803|gb|AEEM01000011.1| GENE 21 11871 - 12293 444 140 aa, chain + ## HITS:1 COG:no KEGG:SZO_14530 NR:ns ## KEGG: SZO_14530 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 139 1 143 143 139 51.0 3e-32 MHNVFVVHEGKSYLHYRSVKGGEYLFSSNPKSIEDGFEPFEERYRKFITTDEIEKIYRIT DTALIDGKECEIFQSSDDNFDQPDSWITIVTDDVEFLKANDIWEGAEVVDNQYGHRFYHS SRIPVSEVTILRTREDLPID >gi|304426803|gb|AEEM01000011.1| GENE 22 12537 - 13280 600 247 aa, chain + ## HITS:1 COG:no KEGG:SZO_17200 NR:ns ## KEGG: SZO_17200 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 139 1 139 141 162 58.0 1e-38 MTEHYLPVKESLGYKNIKTALWNVFQIDLDKIPIREGEYENFAFDLTYNKIPITIVVAGT GKHQQFEFWEGGMVTISLPDPDYPTSSFLKTQFLESVIKDQKIKKRVRYLSGQKEENVEF LFKVLKDYLESDEAKLLLKNKDIILDTVSIDTIGVVEDHLELLLIDDNLWLSYTEHDHLL KLQEKINNYIHYLETKQYVEKYGDNFKEKVIHVTFQYAPSDNVLAFLVQVQKVLQSTDMS LKVTLPD >gi|304426803|gb|AEEM01000011.1| GENE 23 13358 - 14230 171 290 aa, chain + ## HITS:1 COG:no KEGG:SGO_0072 NR:ns ## KEGG: SGO_0072 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 2 286 3 288 295 206 46.0 9e-52 MKKSIFNASFEESINLENDGFRKLQQEQHDKIAKKVINGTPTFGFKIQAVILTLLFPVCF NYLLSLASTELTNYQSNGLDFQPSNYNFLTWQVYLILLCLWLLLVIVGKYFNQAFVLPYR YQFHNFTYMIILYIEIDLLIIGLLLSNLPFFIVLAIMMIWIILIYLMVAVELRGIRKIMY NEFNEPRKIDKIAKLISMYGMGILGVAVIVKQLVSMFLGEPSNSLEEIGILLAVIIMNII MPAVVIFIGTPYFLHAYYKLKYPELYRKYEGKSVEGWYGKKYLKKHTPSP >gi|304426803|gb|AEEM01000011.1| GENE 24 14363 - 15052 612 229 aa, chain + ## HITS:1 COG:SPy1384 KEGG:ns NR:ns ## COG: SPy1384 COG1266 # Protein_GI_number: 15675310 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pyogenes M1 GAS # 1 224 1 224 231 161 40.0 8e-40 MKIFLNVLKVLGIICLSLTCNSIPIVLLWVQNDLSTPIKWLLGITYVIFILAVIFFLWKK LSAHDKENLFKQPIKLKDFGFVVLYWLAARIIAAGGTVIITALTGASSTANDEALMSVAT YFSGGFFFYTVLYCLLIGIFGPIIEEMAYRAFPTYLLFNGKLTWVTGVVTTAIFALPHAT TILEFILYFGMGSAFYLAYRRRGNIKDSMLVHILNNIPGAILFLLLPFV >gi|304426803|gb|AEEM01000011.1| GENE 25 15375 - 15566 164 63 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0575 NR:ns ## KEGG: GALLO_0575 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 63 1 63 63 97 95.0 1e-19 MQIRAFKSEDARQILALSSHFNEIDFLAYRDRDVMTQKQLELTQKSIASNASNIFVAESN GHF >gi|304426803|gb|AEEM01000011.1| GENE 26 15556 - 16197 492 213 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0576 NR:ns ## KEGG: GALLO_0576 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 13 213 1 198 198 382 98.0 1e-105 MQTFYSSFKGVSMTKCTRERIINAFFELAINNPEKTTFTMSEIARQAGLTRQAIYRKHFR SLQEIIDYVHTLIDKQIHQVYSDYDMTTDGNPFNYVADNVLPVIYEGRTWITCLYTSAID SSFEQFIVSTYTKWGMENVHPQSEKFHLPDDVLTQLIVEQTMVIIKNWIIQENPTPPDEF KDDFLRLINAPLSTYLKVDDNKTSNQKEVNHAN >gi|304426803|gb|AEEM01000011.1| GENE 27 16349 - 19714 4531 1121 aa, chain + ## HITS:1 COG:lin0202 KEGG:ns NR:ns ## COG: lin0202 COG4932 # Protein_GI_number: 16799279 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 8 403 15 412 681 77 25.0 1e-13 MAKLRKMLIALLLLCSSIFSARVAFADTVDITVSNTSLSTNAINGGTSTEFSFDFAVPNS AKSGDTTVISLPDELNFQRNQTFNVYASDGTTVVATAVIDTTTKTLTLTYTDYVDTHDDV TGHLSMNVVVDRTVVTEATTVPATVTINGTMTITISSGGINYTVSTGDSDDIDFWKYGVS YSDDEVMYLINVNTSAATVSNVVISDTINSAGLEYVDGSFEIFEGTWYKNAQNYWALGGS TNVTSNYNIELSADNTSFSINLGTISKGYMIRYRVKANYTLINGEQLSNSATYYSENTAL NNADNTFTYQGASGTASGYNYSLTVQKVNEAGEALAGAEFTVTRESTGQVVGTITTGSDG TATISGLLKDNYIITETKAPTGYAIADPVTAEADNSTVTVTDKKATVEVTGTKTWDDNND QDGKRPDSITVNLLANGTVVDTKTVTADDNWTYTFSDLDQYDADGNEIAYTVSEEMVDGY TTVVDGYNITNTHTPETTEVSGTKTWDDNDDQDGKRPDSITVNLLANGTVVDTKTVTDDS NWSYVFTDLPKYANGNEITYTVTEDAVADYTTTYDGYNITNSYTPGETSITVTKAWDDNN DQDGIRPDAIQVQLYADGEKSGDAITLTAADNWTYTWTGLAEKANKQDITYTVEEVSAVD GYATTTGVVENGNVTITNVHNPSTTSLKVDKVWNDNDDQDGLRPTSVTINLLANGEVVDT VDVTPNADGDWTYTFTDLAEYSNGEKVTYAVEEVNTPDGYTSSVDGTTITNTHTPEITEV SGTKVWDDNNDQDGLRPDSVIVNLLANGEVVASQTVTADNDWNYAFTDLPKYDNGNEIVY TVDEATTPDGYTSSVDGTTITNTHTQETTEVSGTKTWDDNDDQDGKRPDSITVNLLANGT VVDTKTVTADDNWSYSFTDLPKYDNGNEITYTVTEDTVADYTTTYDGYNITNSYTPGETS ITVTKVWDDNNDQDGIRPDAIQVQLYANGEKSGDVITLTAADNWTYTWTGLAEKANKKTI TYTVEEVSAVDGYTATVGEVENGNVTITNTHTPTTPETPSSDEPTTPSQSNKKSDKEQDK NIIAALLPSTGSRSGLGLTILGLVLVIALLAGLVYHKVKKA >gi|304426803|gb|AEEM01000011.1| GENE 28 20628 - 20945 153 105 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0578 NR:ns ## KEGG: GALLO_0578 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 105 1 105 105 168 100.0 7e-41 MFWFARPDEIDDSVIEFLNFERNYLTAGWNLDKIFVVTAVIPFFIFLIYTTWKWLLVVII ISAILKVIHSVIFGGSSGLLIIKPAILGIIICTLVIWGFFRKNDK >gi|304426803|gb|AEEM01000011.1| GENE 29 21078 - 21383 220 101 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0579 NR:ns ## KEGG: GALLO_0579 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 101 1 101 101 186 99.0 2e-46 MTNNNQLPPWLAALTEKDLDFIRQFIISSGSLKEMASYYDISYPTVRLRLDKLIQKVSGD GMVEDDNYIQLIRQLALDGKMSYDTARELILSYRKERRYLW >gi|304426803|gb|AEEM01000011.1| GENE 30 21453 - 22181 603 242 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0580 NR:ns ## KEGG: GALLO_0580 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 242 1 242 242 430 99.0 1e-119 MERFKLNRNQLKALATIFMVFDNIYLRFAGLPSIIHLLTRFVAPLFAWLMVEGFFHTHSR KEYCKRLWIAAVLMQIGDFISLALLKEKGISDNIFLTLAISFSVIWLIDTAKKAKGNKKI LLNLGAVALAAVGMVISEGGLSIIPFVFITYLFYHQKTKQAVVYFLYCFILFFTLYGGLS LAIKQGFEMFCVNSDWMGFLVIPFMYLYNGEKGQSRPYQKWFFYVFYPLHLWILAIISVV IK >gi|304426803|gb|AEEM01000011.1| GENE 31 22340 - 23503 569 387 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0581 NR:ns ## KEGG: GALLO_0581 # Name: not_defined # Def: putative permease # Organism: S.gallolyticus # Pathway: not_defined # 1 387 1 387 387 642 99.0 0 MNKERLHIVLNKDIIDQLNLASGQELEAELYADKLVLQREEEPERRTLSSWVLIIATVLL SVVFFAISSMQNRSQILLVGDYSIITFLIGFGGVLGMAIFTITFILNRHLFLGGLKARVF WRMLPVIIMSFTVILLLALLGFGWLLEQIFTGASFDKLTATLILGVSIYAVSALWGQIAE QIRATWLTTVFTVIMISGVFISMATNSSLQWWHFNLSFLGTKEAKDSWQFNLTLMLSALI LVALVDYLFVALGEKYGRNWKLRLMRVMLTVLGLDLGAVGYFPNNASSHLLHTRVAGYLV FIIIALIISVKWLLPNVTRDFLVMSYVIGGMLVGLEVAFEVVHYLSLTAFEMSAFLLAFT WLIRLINHLERLLVPEKKVMTVTLESF >gi|304426803|gb|AEEM01000011.1| GENE 32 24205 - 24492 292 95 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0582 NR:ns ## KEGG: GALLO_0582 # Name: not_defined # Def: putative chorismate mutase # Organism: S.gallolyticus # Pathway: Biosynthesis of secondary metabolites [PATH:sga01110] # 1 95 1 95 95 148 96.0 6e-35 MRDLATVRQEIDKIDEHLITYLAKRQRLVEEAGLLKPKNDLQAVNAQERVEEVIRNCCER ARAANLSPRVAEAIWRTMIGAFIALETEVNSQSKK >gi|304426803|gb|AEEM01000011.1| GENE 33 24506 - 25861 1533 451 aa, chain + ## HITS:1 COG:SP1817 KEGG:ns NR:ns ## COG: SP1817 COG0147 # Protein_GI_number: 15901646 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 450 453 687 75.0 0 MRKILTADTLTPILAYMRVQGEHKVILESIPREKENARFSIVAYNPVFEIKYENGELTEN GQVITGDPLDYLNHVTVKGEATDLPFGGGAIGFVGYDMISLYENIGDIPEDTIGTPDMHF FVYESYLIFDHKTEKVYVVEDNIYSHRDNDATRQALGKVVKDLQTQAPNEFSPQELHSLT FKHHIEKEKFEQMVDTAKKLIREGDMFQCVLSQRFSSPFEGDPLDYYRNLRVTNPSNYLY FYDFGDYQIIGASPESLVSVKNGEVTTNPIAGTRPRGANDAEDAALAKDLQADIKETAEH RMLVDLGRNDIGRISQNGTVKVTKYMEVEYFRYVMHLTSVVKGQLLPDVQSIDALKTTLP AGTVSGAPKIRAMKRIYELEEEKRGVYAGAIGYLSATGDMDFAIAIRTMILKNQKAYVQA GAGIVYDSVAENEFYETINKAKAMTRIGDSQ >gi|304426803|gb|AEEM01000011.1| GENE 34 25858 - 26427 671 189 aa, chain + ## HITS:1 COG:SP1816 KEGG:ns NR:ns ## COG: SP1816 COG0512 # Protein_GI_number: 15901645 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Streptococcus pneumoniae TIGR4 # 1 188 1 188 188 281 70.0 4e-76 MILLIDNYDSFTYNLAQYLGTFSDVQVLRNDDAALEAAAQTADALVLSPGPGWPADAGKL EEMIRLFAGKKPILGICLGHQAIAETFGGKLGLAKNVMHGKQSDIELLAESPVFSNLANE LPIMRYHSIVVTEMPEEFEVVAKTTDDQEIMAIQHKNLPIYGLQFHPESIGSPDGLQMIE NFVRLVVEK >gi|304426803|gb|AEEM01000011.1| GENE 35 26442 - 27446 1329 334 aa, chain + ## HITS:1 COG:SP1815 KEGG:ns NR:ns ## COG: SP1815 COG0547 # Protein_GI_number: 15901644 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 333 1 333 334 378 58.0 1e-104 MKELFNQIANREDLSEEQVEALFDGILNNDVSESEIAAFLMGLKVKGETPSEITGIVRAL KSHAVDLPQVFDDAMCNCGTGGDQSYSFNISTTACFILAAGGIRMAKFGNRSVSSKSGSA DVLEELGINITASPETLSKALDEVGVAFIFAQTMLPAMRFIGPARQVLGIPTIMNIVGPL ANPLDLETQLMGLYRADLQETAAQVMQKLGRKRAIIITGPNNMDEAALYGTNTYTLLDNG KISQHQFTYQDLEMPKVELDDIVGGDAKQNAEILLSVLQNEPSPYLETTVLNAGLGFYAN GKVDSLEEGVSLARQLIADGSALAKLRQLQEVQI >gi|304426803|gb|AEEM01000011.1| GENE 36 27443 - 28210 874 255 aa, chain + ## HITS:1 COG:SP1814 KEGG:ns NR:ns ## COG: SP1814 COG0134 # Protein_GI_number: 15901643 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 255 1 255 255 357 73.0 1e-98 MSKEFLPTILKQKAKEVEELETESLQPLRETYKLYDYLKNNAKKLQVIAEVKKASPSLGD INLDVDIVKQAKTYQDSGAAMISVLTDPFFFKGDIDYLRQISSQVSIPTLAKDFIIDEKQ IIRSRNAGATVILLIVAALPEARLKELYDFATGLGLEVLLETHNLPELEVAHRIGAKIIG VNNRNLVTFETDINTSLELSAHFKEMPVYISESAIFTKDDAALVAPFFNGILVGTALMKA DNVSEKVKELQIDKG >gi|304426803|gb|AEEM01000011.1| GENE 37 28197 - 28778 347 193 aa, chain + ## HITS:1 COG:SP1813 KEGG:ns NR:ns ## COG: SP1813 COG0135 # Protein_GI_number: 15901642 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 192 1 192 199 220 61.0 1e-57 MTKVKICGLSTQAAVEQAVKSGADYIGFVFAKSKRQVGIKQANYLAQFIPETVQKVGVFV SPTLVELQEAITKVPLDFVQIHGDFEEELFKKIDVPSIRAIPVQKALEEIDSQADYLLFD APLAGSGKTFNWELLKDKKITKPYFLAGGLTVDNVQQAITFFHPYAVDVSSGVETDGEKD LLKIAKFIESVKK >gi|304426803|gb|AEEM01000011.1| GENE 38 28775 - 29977 1630 400 aa, chain + ## HITS:1 COG:SP1812 KEGG:ns NR:ns ## COG: SP1812 COG0133 # Protein_GI_number: 15901641 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Streptococcus pneumoniae TIGR4 # 1 399 1 399 407 659 81.0 0 MSYNQPDTNGFYGKFGGQFVPETLMTAVIELDEAYREAKADPSFQEELDALLKNYVGRET PLYYAERLTKHIGGAKIYLKREDLNHTGAHKINNALGQVLLAKRMGKKKIIAETGAGQHG VATATAAALFDMECTIYMGEEDVKRQALNVFRMELLGAKVFSVTDGSRVLKDAVNAALRA WVANIEDTHYIMGSALGPAPFPEMVRDFQSVIGQEAKEQYAEISGGKLPDAVLACVGGGS NAIGLFYPFVEDESVALYGAEAAGHGLDTEEHAATFAKGRIGILHGALMNVLQDRHGQIM EAFSISAGLDYPGVGPEHCHFKDIGRATYDSITDDEALEAFMLLSRLEGIIPALESSHAI ALTQKVAKELGPDKSIIVCLSGRGDKDVVQVKERLEAEGK >gi|304426803|gb|AEEM01000011.1| GENE 39 29981 - 30763 929 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149002101|ref|ZP_01827055.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP14-BS69] # 1 260 1 258 258 362 69 8e-99 MTKTLTKHLENIATSGKGIFVPYIMAGDHEKALDGLFDTITFLENSGASAIEVGIPWSDP VADGPVIELAGQRSLANGVNLTAIVQKLQEKQTTVPLVIMTYINPVYQYGIEKFIADLKN TSVKGLIIPDLPHEHENMVKPYLTDTDIALVPLVSLTTGIERQKTLCKDAEGFIYAVAIN GVTGKTGNYRDDLDKHLTNLKAIADIPVLTGFGVSTPADIERFNKVSDGVIVGTKIVRDL HEGKTDDVADFVKYGSNYQK >gi|304426803|gb|AEEM01000011.1| GENE 40 30828 - 32168 1256 446 aa, chain - ## HITS:1 COG:SA0956 KEGG:ns NR:ns ## COG: SA0956 COG1914 # Protein_GI_number: 15926690 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Staphylococcus aureus N315 # 4 446 7 445 450 406 53.0 1e-113 METSTHYQKSLSEVNQSIAVPKNASFWRTLRAFIGPGALVAVGYMDPGNWITSVVGGATY KYLLLSVILVSSLIAMQLQQMAGKLGIVTKLDLAQATAAHLPKKLRYLLFIVIELALMAT DLAEVIGSGIALHLLFGWSLLFSIFITILDVFILLSLMKLGFRKIEAIVSTLIATILIIF LYLVILSKPSLSGILHGYLPNASILDLKQSGVNSKLTLALGIIGATVMPHNLYLHSSISQ TRKVNYKSQDSIKQAVRFMTWDSNIQLSLAFVVNSLLLILGASLFYGHASEINAFSQMYD ALQNSEIAGSVASAALSTLFAIALLASGQNSTITGTLTGQIVMEGFLKLHLPQWVIRLVT RLAALAPVMIVAVLYGSRESVLDQLIVYSQVFLSVALPFSIFPLVYFTSNRKLMGEFVNA KWNTILGYLVAIVLTLLNLKLIIDLF >gi|304426803|gb|AEEM01000011.1| GENE 41 32251 - 32901 310 216 aa, chain - ## HITS:1 COG:SP1808 KEGG:ns NR:ns ## COG: SP1808 COG1989 # Protein_GI_number: 15901637 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Streptococcus pneumoniae TIGR4 # 6 210 6 211 219 147 44.0 2e-35 MDILLFFFLGASIASFLSLIVDRFPEKSIIFPASHCDSCGKQLAVRDLIPIFSQLINHSR CRFCHTKIPFWYGLLELYFGVIVVLYYCALLSLDQVFILFFSTTLSLYDLKCQEFPLLVW LLPSIFLLFVTPINALAIILLAFGIMAELIDLKIGSGDFFYLASLSLLLDLQTILWIIEL GSLSGIIYYFFQTNKRIPFVPFLFLGYLILSIFNHT >gi|304426803|gb|AEEM01000011.1| GENE 42 33031 - 33561 790 176 aa, chain + ## HITS:1 COG:SPy1531 KEGG:ns NR:ns ## COG: SPy1531 COG0783 # Protein_GI_number: 15675430 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Streptococcus pyogenes M1 GAS # 1 175 1 175 175 267 77.0 7e-72 MTQTITENIYASVTHNISQKSTAKNAKTKAVLNQAVADLSKAASIVHQVHWYMRGAGFYY LHPKMDELMDGLNASLDEMSERLITIGGAPYSTLKEFDENSKLEETTGSFDKTMDEHLAR LVDVYTYLSALYQVGLDVTDEEGDAPSNDIFTAAQADAEKTIWMLQAERGQAPGIK >gi|304426803|gb|AEEM01000011.1| GENE 43 33802 - 34068 207 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKKENRISINDETLFGKNNYGIGTISNSQSSSTIQALLCYSACKSECSSSCGSKCASKC SSQCWSICSGGADDALEIYYENTDLINL >gi|304426803|gb|AEEM01000011.1| GENE 44 34161 - 35777 1010 538 aa, chain + ## HITS:1 COG:SA0599 KEGG:ns NR:ns ## COG: SA0599 COG1132 # Protein_GI_number: 15926320 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 34 524 39 529 575 102 23.0 2e-21 MNKLLKEKLFSFRAILIIQLVVTFITTMIAIISPLLEGEIINTLISGGVKQYYVILCLLA LGIFLLRLASSYYSSRIEYVLLDDRKYQLYSMFLEILLQKDIRFLEDYEGNYLNTRIKSD IDTLVDFIFLKLPYLFGKIITIIAISAILIVLQPSVFFYFSILILIYVVIYYASHRFMYT SFLAIRENANRYQSLQSSIFQRFLNIKIKSTEKAEYQHLSASFQEMMDSIKHNFGIRYIV STLQIIVTFVSQAIFFIVGGLAVVRKELSIGLFTAIIQYFGDFISCLDNFFGIAIDLQEY RGAVNRLNELLEISNDTEGTEMVENISQITFENFNILRDGKEILYQNNLNQKLSKGKLYI LKGRNGVGKTTLIKTLIGVLKNNYQGEIYLNHNKINDINTRQLRSNQLSVMVQQDIPQNI LVCDLLTTYLSKDELFSFLETSPCQEIWQYLIANRADDLLMQSVDQLSGGEQQVIQLLVT LSKREANVIILDEPFANIAQILKPKLMHLIEELTKDKIVILISHDDHLSSQHQEIVLE >gi|304426803|gb|AEEM01000011.1| GENE 45 35789 - 36640 333 283 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946697|ref|ZP_02093900.1| ## NR: gi|160946697|ref|ZP_02093900.1| hypothetical protein PEPMIC_00655 [Parvimonas micra ATCC 33270] # 3 283 2 268 269 127 30.0 7e-28 MNFFIYQFVIFELEEYVLVQNCKGLNMIKNKKLIEFFKILDADNKLCVNKKFLDDFFEEE SNEVTRYLLDNELVYLEPEKTIFSKIKLFLNNKVIFESLEYNKIGSKKEIEATLLENSLE MTNILESEINNTDSNTLFIVVLTPFDYCEFLKLNNLLSEGNKMFAFVISYNSSFYITNIH MKKWFNPCPKCFFSQLEASLRAYNKRTTSITFQTIVDLLYNNKINYNPTLPVNRRLVLPL ILEILKIESCDINDTASRIVKINDEDGIIYDQAIHWELCNCFE >gi|304426803|gb|AEEM01000011.1| GENE 46 36935 - 37255 176 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSKIYSYKVDDNKILKIGVSTLEEYGLFGESLDFKYIILTYISLDILSSIGRNSLFYFL KESGVIRSKLSDDLSISTIFVNYNCLSHIAKLNVNSVIILDAIGVN >gi|304426803|gb|AEEM01000011.1| GENE 47 37255 - 38244 211 329 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|257088604|ref|ZP_05582965.1| ## NR: gi|257088604|ref|ZP_05582965.1| predicted protein [Enterococcus faecalis CH188] # 1 328 2 325 326 107 29.0 9e-22 MLFRYYSDYLNYSNQLFIQQAIVAIGALSVTHIDNFEFPYSSSACDHSRLISLKKLYSEH IERSRLSYIYGDEDKIAYVNLLDETINYISKSSLTYGTNSDIGYVDSTGTAFHPNSSQLS IKKAISELIEKNELLLFWYLELGEKIDVEDPMIKKIIDDFNLSEYEIFLFKVQNISSWFT VVGVMFQNGKIISSGISCHEELKKALIGAITELKIIRVLNSFTYFNVFPKHRDFNAKLYQ KIKKFNFKKTLIGKRKEIQKYNLGLNKEIQNLNVAFISNNKNYGVVSAFSDSLIKCLPTK QNLELCKNIPIVQNNREFIFNSELDCVIV >gi|304426803|gb|AEEM01000011.1| GENE 48 38257 - 39279 72 340 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|160946700|ref|ZP_02093903.1| ## NR: gi|160946700|ref|ZP_02093903.1| hypothetical protein PEPMIC_00658 [Parvimonas micra ATCC 33270] # 18 340 15 338 338 153 34.0 2e-35 MGEIFNSLGYTFNIEFPKYLDKYKCNTWGSLNYNSVSSNGSSTNKKFQASVIGSIGEVFE RQALINHVNEGVEKIECIDLHTKRVESIDINVNNSIYFLDTCGLATHVSTFSAIENSLKE FIERQSFILTYLSKIPKKVILKDANFLSMIPESLKHINFYEISLIDSFRVVFGIGTREKN KIDIGVGAGYTIEEALENLYRELLPLGGEHGRIEIEKGDQVDYIHVFDKLKIEKIVEAYS FLDNGIVCNINDFKSEERQKTRENVIEELHIKYGMNLKLCTLISKNNIYFRNYRSKITKI CEFDWFPSLRVSDYTEKVYRHIEHKTGIKLDRKINFIPFP >gi|304426803|gb|AEEM01000011.1| GENE 49 39302 - 40159 298 285 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNYSIYLNPKMRILHKDTQALTVIVEKNKIRLTGPKIRSYFLDNLQYYVAPKTVEELIK IIGNKMRYVFSLSDLKLVLNELILNNILLIYPYPTIENTDTVSANMACVNYANFQYSKKL KDNLNLVLPTHVRLNFTSLYCSIPDNLENYDIILIVFERWNHFIYEDLLKKIALGMGEDT IFIPIVVNNNYFSMGPQISKQNEEIEEAIFYLDNEENRSTYFSQYDNTNYQFFTTSLLSL EILEFLKRTNIRSKTYRRMLTYNFNSGELRSVRYKEMNRRYRNGL >gi|304426803|gb|AEEM01000011.1| GENE 50 40149 - 40934 304 261 aa, chain + ## HITS:1 COG:MJ1384 KEGG:ns NR:ns ## COG: MJ1384 COG0778 # Protein_GI_number: 15669574 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Methanococcus jannaschii # 82 237 24 181 198 100 32.0 2e-21 MDYEMRCIRTNVDEVLFETFHNETSLSQVNSHLFEESISSAFDNPFFMDRIHKKEIVDDV CGIKLRSNTDKNNVLLNTIHTRESIREFSCEEITLESFSNILVHSYGKSESGSYTIPSAG GAYPLTLILIIKNVKGILKGIYEYLPQNNTIKLIGSEESIEVNKITLNEYFFETCAFSVH LIGDPKLICYKYQDRGYRFMNIECGHLAQNLNLVAQYYGVASVCSGGFLDGEFIDYLNNI TNGNYHNYVNLYEVFFGKKQE >gi|304426803|gb|AEEM01000011.1| GENE 51 41054 - 41263 254 69 aa, chain + ## HITS:1 COG:SPy1530 KEGG:ns NR:ns ## COG: SPy1530 COG4483 # Protein_GI_number: 15675429 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 66 1 66 67 85 80.0 2e-17 MKTLYDVQQLLKRFGIYVYIGKRLYDIEVMKLELEKLYENGLIDKTDYLTAELILRREHR LEMEKENND >gi|304426803|gb|AEEM01000011.1| GENE 52 41256 - 42224 1043 322 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 1 319 1 319 319 406 62 1e-112 MTKKLLGIDLGGTTIKFGILTLEGEVQEKWAIDTNILEDGKHIVPDIVESIKHRLNLYGL TKDDFVGIGMGSPGAVDRAKKTVTGAFNLNWAHTEEVGSVIERELGIPFAIDNDANVAAL GERWTGAGANNPDVVFVTLGTGVGGGVIADGNLIHGVAGAGGEIGHMNVEPVDGFECTCG NKGCLETVASATGVVRVARHLAEEYEGDSSIKAAIDNGDAVTSKDIFVAAEAGDHFADSV VEKVGFYLGQATANIANILNPDSVVIGGGVSAAGEFLRSRVEKYFVSYAFPQVRKTTKIK IAELGNDAGIIGAASLASQFVD >gi|304426803|gb|AEEM01000011.1| GENE 53 42236 - 42616 616 126 aa, chain + ## HITS:1 COG:SPy1528 KEGG:ns NR:ns ## COG: SPy1528 COG0607 # Protein_GI_number: 15675427 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Streptococcus pyogenes M1 GAS # 4 126 6 128 129 135 49.0 2e-32 MNWIIVLVILVAIVAWMAWTYFSLRRAAKFIDNAEFESMIHTSQLIDVREAGAFKTKHIM GARNLPASQIQLSMSAIRKDKPVLLYDSSRSSALPRVIRTLKKAGYTNLYVLKDGFDYWT GKVKES >gi|304426803|gb|AEEM01000011.1| GENE 54 42631 - 43677 879 348 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0596 NR:ns ## KEGG: GALLO_0596 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 348 1 348 348 571 99.0 1e-161 MEFEKENLKRKNDESKDALKSKYLKNQIFQLDLELSQVTDEDDKKRLEALRNVYVEKLQE NKKRRLIRILLISPLFFLALIILYLVTAFNRETTANNKAEWSPSTTATSTSTSSSSSSSS TSETKTSSTIKQGVPAELVGNWKTADFDGVILTISEDGTMTKNQSNYIVTERVSGYEEVA QGVYRFYPADGSDSEAIGALIFGGIGGSYQTTPKFASGIYVKNGYIYPQFWTTTSSKFTY SLNTNLKLVSTDQAAVADAIDTKNLTTEQVEAWVLAIYASQNQLSDEDKENYFVNVKAYD DNLVYASVRKNSDSKTRLALYRVNADGYLEQGTLEATNWSVVSTAYVE >gi|304426803|gb|AEEM01000011.1| GENE 55 43765 - 45939 1924 724 aa, chain - ## HITS:1 COG:BH2223 KEGG:ns NR:ns ## COG: BH2223 COG3345 # Protein_GI_number: 15614786 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Bacillus halodurans # 7 723 20 742 748 531 40.0 1e-150 MSNTDMSYLIKIMPNGQLEQLYFGPTLVLKEDDFSLLEHSEGKAAGTVKYAKNSSFTLAD KHQECALYGTTAFQEASLEVTVHDTPHYLELKYLDYDTQKEKLSYSGPHVRLNDDAEILS LRLEDAGLQLQVTLEYVFFKKGKNISKRVLINNNGQHDIVLTRALSSTFWLEDANDYQAY HFSGAWISERQLKKYPLQQGSFKVESLTGTSSHQHNPFVAIAKKETTFDTGMCYGANLVY SGNFIQQIDVNEWNQARLMSGISPYTFSWQLKPNENFATPQTVLSFSQDGLNGLAQENAD FISEHIISPFWAKRERPIVLNSWETYVFDFDENKLLTLAKEAAALGIECFVVDDGWFAKR NNDRSSLGDWYPNPEKFPNGLQVFAQKIHQMGLQFGLWFEPEMVNEDTELYRKHPDWIVE PPQGRHSYGRGQLVLDFTNPAVVENIFEQMSRIIDETQLDYLKWDMNRNLTEVYSNYLAK NGIRQGEFFHRYVQGVYQLYEKLLERYPNLLIEGCASGGGRFDLGILYYSPQIWVSDNTD AIARLDIQENTALAYPITCLSNHVSQVPNGQIQRITPLETRFNVAIFGILGYELDLLSLD EHSKNIIKQQITLYKNLRHDIMTGRFYQVLKRPNQHIWALQSPQIILVGYFSILADINQS TSKTFTLPFVDSQTTYDIVDNQTVSGSLLKYRGMPVPIALNGTNQETAALVGDFQSKLLL LRKH >gi|304426803|gb|AEEM01000011.1| GENE 56 45982 - 46422 289 146 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIENTVLSYSKQIDCPVEVIYQEVIEETLQFFKYYDNHITQLQEQMTIKKPFYTKTTKER VWGKTTIIEMKENHSLKLSSSYAGGNILQCFLFETVNGKTKIEYQEANSFTDKSKQVNFF IVSLLYRFVFKYKAAKRLKYIATKVA >gi|304426803|gb|AEEM01000011.1| GENE 57 46415 - 47719 1203 434 aa, chain - ## HITS:1 COG:lin0900 KEGG:ns NR:ns ## COG: lin0900 COG1455 # Protein_GI_number: 16799973 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 10 423 11 423 428 321 42.0 2e-87 MSLTDKITQKMMPLATAICENKHLTSLRDGFMVAFPATMFASIMMIIQNLPATFGFDKFL PDGFITFLNDFFGPIGNATMNVTALFVTFGVGYHFAKYLKCSKIYAGAVSLASFLLLLPF KTVKGQVYMPTAKLGSQGMIVAILTGFLATAIFAYLENKKITIKMPKQVPPGIATSFTSI IPSAASLLIFNTVRYLFTFTSWGNAFDCLFNVLQRPLVGLGTSLPATLVAVVAAQLLWWF GVHGQMIVGAITEPLLQTSNLENYAAFQAGKPLPHIICSTFMGIFPLIGGNGMTLGVVLI SLFLARSLRLKSTMKMVAVPAFFNISEPITFGLPIVLNPMVLIPWILAPVVTVLTSYYAI YLGFVPRPIGVTIVWTTPVFLSGWIGTASIAGGILQLVNVAVSIAIWLPFMMAIDKTYLA DEANPVTESVAEND >gi|304426803|gb|AEEM01000011.1| GENE 58 47845 - 48705 648 286 aa, chain + ## HITS:1 COG:SP1899 KEGG:ns NR:ns ## COG: SP1899 COG2207 # Protein_GI_number: 15901726 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 14 270 12 273 286 159 34.0 7e-39 MKIINYSNDCYQNVDVMLYNYGYEECDSGHFYGPAVRKSYMIHYITAGKGIFRVNHQTYE LSTGDAFLMKPGEEIYYEADEKEPWCYAWIGVQGAKIEHYLDCTTLLEKPVFHYDKDERL VKIYNQFFKATKEPVLLRELKANRAIYDLFAFLIENFPNHQSQDKKDDLSYIKEAVAYCN LNLDKPIKVQEIADYLNLNRSYLARLFKQKTGVSLKQYLSHLRIENAKELLTKTELPVNV IACSIGFSDPLYFSKFFKKWTGYSPEKYRQVEVNVQDRQQYEFLLK >gi|304426803|gb|AEEM01000011.1| GENE 59 48832 - 50676 2414 614 aa, chain + ## HITS:1 COG:SPy1527 KEGG:ns NR:ns ## COG: SPy1527 COG1217 # Protein_GI_number: 15675426 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Streptococcus pyogenes M1 GAS # 1 613 1 613 613 1104 93.0 0 MTKLREDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELQERAMDSNDLEKERGITIL AKNTAVAYNGVRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKAL EQNLTPIVVVNKIDKPSARPAEVVDEVLELFIELGADDDQLEFPVVYASAINGTSSLSDD PADQEHTMAPVFDTIIDHIPAPVDNSEEPLQFQVSLLDYNDFVGRIGIGRIFRGTVKVGD QVTLSKLDGTTKNFRVTKLFGFFGLERREIQEAKAGDLIAISGMEDIFVGETITPTDCVE PLPILHIDEPTLQMTFLANNSPFAGREGKFVTSRKVEERLLAELQTDVSLRVEATDSPDK WTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGVKCEPFERVQIDTPEEYQGSV IQSLSERKGEMLDMQSTGNGQTRLVFLAPARGLIGYPTEFLSMTHGYGIMNHTFDQYLPV INAEIGGRRRGALVSIDTGKATTYSIMSVEERGTIFVNPGTEVYEGMIIGENSRENDLTV NITKAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILDKN LRAKAAKKKKSAEE >gi|304426803|gb|AEEM01000011.1| GENE 60 50932 - 51204 284 90 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0598 NR:ns ## KEGG: GALLO_0598 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 90 1 90 90 129 100.0 3e-29 MFYLIVAILIVSYYFFMAPKTIRSTLNMIGMVGAVALLLVLAAMSFVKIMQSPPEIFLGL AMVALGFFAIRDVYRLPSKKDEKKHYSKKS >gi|304426803|gb|AEEM01000011.1| GENE 61 51327 - 52682 1862 451 aa, chain + ## HITS:1 COG:SP0688 KEGG:ns NR:ns ## COG: SP0688 COG0771 # Protein_GI_number: 15900589 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 449 450 675 78.0 0 MKTIKTFENKKVLVLGLAKSGEAAARLLEKLGAIVTVNDGKPFDENPAAQSLLEEGIKVI CGSHPLELLDENFELMVKNPGIRYDNPMVARAIEKNIPVITEVELAYMISDAPIIGITGS NGKTTTTTMIAETLNNGGKSGLLSGNIGFPASEVAQTATDKDILVMELSSFQLMGTDTFH PHIAVITNLMPTHIDYHGTFEEYVAAKWNIQKNMTADDFVVLNFNQDLAKELAQKTVAKV VPFSTTEKVDGAYLDGDTLYFKGEAIMKASEIGVPGSHNVENALATIAVAKLSGIANDAI KETLTHFGGVKHRLQALGEINGVKFYNDSKSTNILATQKALSGFENSKVILIAGGLDRGN EFDELVPDITGVKLMVILGESAPRVKRAADKANVPYVDAKDVADAARIAYDKAEAGDVVL LSPANASWDMYRSFEVRGDEFIATFEAIKGE >gi|304426803|gb|AEEM01000011.1| GENE 62 52685 - 53761 1185 358 aa, chain + ## HITS:1 COG:SPy1524 KEGG:ns NR:ns ## COG: SPy1524 COG0707 # Protein_GI_number: 15675423 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Streptococcus pyogenes M1 GAS # 1 356 1 358 360 517 70.0 1e-146 MAKKIVFTGGGTVGHVTLNLILIPKFIKGGWEVHYIGDRNGIEHEQITKSGLDVTFHSIA TGKLRRYFSWQNMLDVFKVSFGILQSLAIIAKIRPQALFSKGGFVSVPPVIAAKTLGVPV FVHESDLSMGLANKIAYKFATTMYTTFEQAEGLAKAKHVGAITKVGSKVDYDDSKIEEIK NHFDPNLKTLLFIGGSAGARVFNDFITNTPELIEHFNVINISGDKRLNGLSQNLYRVDYV TDLYQPLMDMADVVVTRGGSNTIFELVAMHKLHLIVPLGKEASRGDQLENAAYFEKKGYA RQLAEEKLTFTNLEEELAQLFAHEDSYQTAMATSNEIKSQDEFYHLITQDISKTAKGM >gi|304426803|gb|AEEM01000011.1| GENE 63 53762 - 55042 1460 426 aa, chain + ## HITS:1 COG:SPy1523 KEGG:ns NR:ns ## COG: SPy1523 COG1589 # Protein_GI_number: 15675422 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Streptococcus pyogenes M1 GAS # 10 392 3 367 382 219 42.0 1e-56 MTKEKEQDKKESKTQNDEKLALTEWQKRNIEFLKKKEAEEAEKKKRQEKLRLERTPHVKK EDDDEEEKDSQSEKKADKATTNGDADGQEIVSKKEKKQKVKQAKKARKEKKKKEKKELTP LQKASRRAYPVLIVAGAVLLISLFLVTPISKQKTVTVSGTSTTTSDAVLTASGIKSSDYF FSLIFNHSAYEKSILKNDKMVKEAKIVYHFPNKFTIKVKEYDIVAYAQTDDGYQPILENG THLDVVGASELPDTFLTINLSSESDIQKLIKAFSKLDKDLVSQIQIVSSANSSTTADLLL LEMHDGNTVRVPLSEIVEKLPYYTKIKGNLTEASIVDMEVGIYTTTETIESEAAAEKESA SSESSDENTESSDTESTTESSEETQTESSDTEVSTEAFAVDGASDNNPTTEENPNNMTSG MQVGQQ >gi|304426803|gb|AEEM01000011.1| GENE 64 55178 - 56542 1646 454 aa, chain + ## HITS:1 COG:SPy1521 KEGG:ns NR:ns ## COG: SPy1521 COG0849 # Protein_GI_number: 15675421 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Streptococcus pyogenes M1 GAS # 1 454 1 454 454 692 83.0 0 MARNGFFTGLDIGTSSIKVLVAEFVSGEMNVIGVSNVPSTGVKDGIIIDIEAAAEAIKKA VEQAEEKAGMTIDKINVGLPANLLQIEPTQGMIPVPSESKEIKDEDVDSVVKSALTKSIT PEREVISLIPEEFIVDGFQGIRDPRGMMGIRLEMRGLIYTGPSTILHNLRKTVERAGISV ENIIITPLAMAKSVLNEGEREFGATVIDLGGGQTTVASMRAQELQYTNIYPEGGEYVTKD ISKVLKTSMQIAEALKFNFGQANLEEASLSETVQVDVVGSDTPISVSERYLSEIISARVR HILDRVKQDLERGRLLDLPGGIVLVGGGAIMPGVVEVAQEIFGTTVKLHVPNQVGIRNPM FANVISLVEYVGTMSEVDVIAQRAVSGEELLRRKPVDFEPQPQVQPRVVYNNDPVVPAND NLVPPTQVPPVQKQEESRPKLGERVRGIFGSMFD >gi|304426803|gb|AEEM01000011.1| GENE 65 56563 - 57885 2057 440 aa, chain + ## HITS:1 COG:SPy1520 KEGG:ns NR:ns ## COG: SPy1520 COG0206 # Protein_GI_number: 15675420 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 440 1 439 439 648 87.0 0 MAFSFDTASVQGAVIKVIGVGGGGGNAINRMIDEGVAGVEFIAANTDIQALSSSKAETVI QLGPKLTRGLGAGGQPEVGRKAAEESEEVLTEALTGADMVFITAGMGGGSGTGAAPVIAR IAKSLGALTVAVVTRPFGFEGNKRGNFAAEGIAELREQVDTLLIISNNNLLEIVDKKTPL LEALSEADNVLRQGVQGITDLITSPGLINLDFADVKTVMANKGNALMGIGIGSGEERITE AARKAIFSPLLETTIDGAQDVIVNVTGGLDMTLTEAEEASEIISQAAGKGVNIWLGTSID DTMKDEIRVTVVATGVRQDRAEQAAGFQQPTRSFTQANAQQAAGAQYASERTQQPNQTTF ERRSSFDYDMGESHAMPASQQPAANQSQQKENSFGNWDLRRDNIARPTEGELDSKLTMST FTANDDADDELETPPFFKNR >gi|304426803|gb|AEEM01000011.1| GENE 66 57885 - 58559 666 224 aa, chain + ## HITS:1 COG:SPy1519 KEGG:ns NR:ns ## COG: SPy1519 COG0325 # Protein_GI_number: 15675419 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Streptococcus pyogenes M1 GAS # 3 223 2 222 223 280 63.0 2e-75 MTDFQKNKDLVFEQVAQAAQQANRSKESVNVIAVTKYVDSGVAARLIDTGIEHIGENRVD MFLDKYEALKDRNLTWHLIGSLQRRKVKNVINFVDYFHALDSVKLASEIQKRAEHTIKCF LQVNISEEESKHGFKVSEIDEALAAISEFDKVEIVGLMTMAPKEASESEIEEIFGKANQL RQELQARQLPHMPFTELSMGMSGDYKIAIRNGATFVRIGTSFFK >gi|304426803|gb|AEEM01000011.1| GENE 67 58574 - 59182 669 202 aa, chain + ## HITS:1 COG:SPy1518 KEGG:ns NR:ns ## COG: SPy1518 COG1799 # Protein_GI_number: 15675418 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 202 1 218 218 195 57.0 4e-50 MAFKDKFDKLISYFDTDEVSDVEETVEEEAQRPRVQQQAEAVPQQAQRRAEPVQNVRTQQ VQGGGAARQRPQQPQQRRAVEENQPVRSINQRREEQMQVRANQATTTIALKFPRKYEDAQ EIVDLLIVNECVLIDFQYMLDAQARRCLDFIDGASKVLYGSLQKVGSSMYLLTPSNVIVN VEELAVPNNGQDIGFDFDMKRR >gi|304426803|gb|AEEM01000011.1| GENE 68 59186 - 59440 214 84 aa, chain + ## HITS:1 COG:SPy1516 KEGG:ns NR:ns ## COG: SPy1516 COG0762 # Protein_GI_number: 15675417 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 83 1 83 84 73 60.0 7e-14 MIFVLIVLLRLIQFYSYLLFAYALLSWFPGAYNTWFGRAMGQLVEPVIRPFRRFNLQFMG LDFTILAVVIALNVLSRVLIMIFT >gi|304426803|gb|AEEM01000011.1| GENE 69 59442 - 60233 550 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15901497|ref|NP_346101.1| ylmH protein [Streptococcus pneumoniae TIGR4] # 3 263 1 261 261 216 42 7e-55 MAMKKGLYQHFRPDEYDFIEKIDDLARRVEETYAYALTDFLNPRQVDIAKSVIGNRGLHY FVSSDYYPAEYARLIVAPDYYEFNPEDFELTLLEVNYNSKFNQLTHSQIMGTLLHKLGIK RTVIGDILVESGYAQLLVTQNMADYFRANVTKIAKASVSLKEIPLEQLIAGEKDSRQLDI MVSSMRMDKVLATVLKLSRSQAVQLIETDKVKLNYQIVDRASEMLQVGDLISVRGFGRFS ILSENGLTKNGKCKLTVDKMIHK >gi|304426803|gb|AEEM01000011.1| GENE 70 60244 - 61011 1216 255 aa, chain + ## HITS:1 COG:SPy1514 KEGG:ns NR:ns ## COG: SPy1514 COG3599 # Protein_GI_number: 15675415 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Streptococcus pyogenes M1 GAS # 1 253 1 252 252 285 75.0 7e-77 MALTALDIKDKTFKLKFRGYDEEEVNEFLDIVVDDYEDLVRRNHEQENRIKDLEDKLAYF DEMKESLSQSVILAQETAEKVKTSANDEAANLVSKANYDAQHLIDEAKSKANQILRDATD EAKRVAVETEDLKRQTRVFHQRLVAAIEGQLGLTNSPEWTELLQPTAVYLQNSDAAFREV VEKVLEEEVPETDDELSMDATRQFTPEEMEELQRRVEAGNKHLEETQKNAIVDDNEADPE INLNETQTFKLNIEE >gi|304426803|gb|AEEM01000011.1| GENE 71 61322 - 64120 3628 932 aa, chain + ## HITS:1 COG:SPy1513 KEGG:ns NR:ns ## COG: SPy1513 COG0060 # Protein_GI_number: 15675414 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 932 1 933 933 1620 84.0 0 MKLKDTLNLGKTAFPMRAGLPNKEPNWQKEWEEADIYAKRQQLNEGKPSFNLHDGPPYAN GNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLPIEQVLAKKGVKRKEIPLTEY LEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQIRVFGAMADKGYIYRGA KPVYWSWSSESALAEAEIEYHDIDSTSLYYANKVKDGKGVLDTDTYIVVWTTTPFTVTAS RGLTVGPDMDYVVVKPANDDRKFVVAEGLLDSLAEKFGWESFEVLAKHKGTELEYIVTEH PWDTEVDELVILGDHVTLDSGTGVVHTAPGFGEDDYNVGVKYGLEVFVTVDERGIMMENA GPDFQGQFYDKVVPTVTEKLGDLLLASEVITHSYPFDWRTKKPIIWRAVPQWFASVSKFR QDILDEIDRTTFYPEWGRTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGTAIMTKEVT DHVADLFAEHGSIVWWQREAKDLLPEGFTHPGSPNGEFTKETDIMDVWFDSGSSWNGVMN AREGLEYPANLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKSL GNTILPSDVEKQFGAEILRLWVTSVDSSNDVRISMDILKQTSETYRKIRNTLRFLIANTA DFNPNTDAVAYENLRAVDKYMTVKFNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFY LDFAKDVVYIEAADNLARRQMQTVFYDILVKITKLLTPILPHTAEEIWSYLEFEPEEFVQ LSELPDAEVFAGQENILEEWDAFMTLRNQAQKALEEARNAKIIGKSLEAHLTIYASEEVK TLLTALDSDVAQLLIVSQLTVTDEAAPADAVVFDDVAFTVAHADGQVCDRCRRVDPTAKE RSYGVTICDHCAEIVEANFPEAVAEGFEVKAK >gi|304426803|gb|AEEM01000011.1| GENE 72 64222 - 64524 314 100 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0610 NR:ns ## KEGG: GALLO_0610 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 100 1 100 100 171 99.0 7e-42 MRLINTTSSHSELVRNQLRNTDAKLVETYSAGNTDVIFTQAPKHYELLISNKYRAIKDSE IEAIREFFLKRKIDKSIVQLDQLKTLHTANLIEISFPTAH >gi|304426803|gb|AEEM01000011.1| GENE 73 64596 - 65042 618 148 aa, chain - ## HITS:1 COG:SPy1510 KEGG:ns NR:ns ## COG: SPy1510 COG0494 # Protein_GI_number: 15675412 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 148 1 148 151 211 70.0 3e-55 MTNPTFGEKLTTVDYKARYGVYAVIPNADKSQIILVQAPNGSWFLPGGEIEAGEDHFSAL KRELIEELGFSAELGYYYGQADEYFYSRHRDTYFYNPAYIYEVTHFEEIDAPLEDFNNLS WFPIDEAIEKLKRGSHKWGVEAWKKNHH >gi|304426803|gb|AEEM01000011.1| GENE 74 65321 - 67609 1658 762 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 94 749 143 814 815 643 50 0.0 MLCQNCHLNESTIHLYTNVNGQQKQIDLCQNCYQIMKTDPNNTILGGLGDAPASSTQNQS TGMNPFDDFFSNLNNFHAFGGQDFQNTPPTQSGGGNNGGNNNNYRPNGAANQQQQQKGLL EEFGINVTDIARRGDIDPVIGRDAEIIRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQ KIVDGNVPQKLQNKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRERKDVILFIDEIHE IVGAGSAGDGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPS VEETITILRGIQKKYEDYHHVKYSDDAIEAAANLSNRYIQDRFLPDKAIDLLDEAGSKMN LTLNFVDPQEIDKRLVEAENLKTQATREEDYERAAYFRDQIAKYKEMQQQTINEDDIPVI TEKTIEAIVEEKTNIPVGDLKEKEQSQLINLADDLKTHVIGQDDAVDKIAKAIRRNRVGL GTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPP GYVGYEEAGQLTEKVRRNPYSLILLDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKD TIIIMTSNAGTGKTEASVGFGAAREGRTNSVLGELSNYFSPEFMNRFDGIIEFKALSKDN LLQIVNLMLDDVNKRLATNDIHLEVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAIT DFYLENPSEKDLKAVMTSNGKIIIKSAKKVEKEETTVSAESE >gi|304426803|gb|AEEM01000011.1| GENE 75 67751 - 68278 430 175 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0613 NR:ns ## KEGG: GALLO_0613 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 175 1 175 175 312 98.0 3e-84 MKTKKTSLWLKFIKRFYGINGELDEYREQEVNRIGNKLFIGLFFFELFFSTIILLINQTI ATTAFLYINLFVLIFVIPIILLVMLTNRDLQTSLEVPKNEVEQTRQKARKKGWLAGGIFA LFMLVFNAFSKWQEGENPLELFTNPLGLIAIILGGVIFGAAMGSMAASQIDPEKE >gi|304426803|gb|AEEM01000011.1| GENE 76 68306 - 68515 122 69 aa, chain - ## HITS:1 COG:SP0333 KEGG:ns NR:ns ## COG: SP0333 COG1476 # Protein_GI_number: 15900264 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 17 65 13 61 64 67 65.0 4e-12 MEFRRKSLPSVPLKESIKKFLLKKQIGVARQTVNLIENNKYNPSLDLCIKLAEALQTDLN TLFWENRHL >gi|304426803|gb|AEEM01000011.1| GENE 77 68850 - 69830 1294 326 aa, chain + ## HITS:1 COG:SPy1544 KEGG:ns NR:ns ## COG: SPy1544 COG0078 # Protein_GI_number: 15675442 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Streptococcus pyogenes M1 GAS # 6 323 9 329 337 401 62.0 1e-112 MAINDSFLKEIDFTKEELVELIDLGLKFKELKKKRIPHKYLEGLNIALIFEKTSTRTRSA FTVAGQDLGMNVTYLGSSEIQLGKKESVIDTAKVLGSMFDGIEYRGFKQEDVEALAEYSG VPVWNGLTDTWHPTQMIADFMTLKEVFEKLEGLTIAYVGDGRNNMANSLLVTSAILGVNV KIIAPASLQPEAEIIEIAQKYNNGAELTITDDLAAVKGVDMLYTDVWVSMGEKVDFKERI DLLLPYQINAELLAKTENPDVIVMHCLPAFHDLNTEIGQEIYDKYGLAELEITDEIFQKY SSIIFQEAENRMHSIKAIMYNSLKAI >gi|304426803|gb|AEEM01000011.1| GENE 78 69965 - 70195 395 76 aa, chain + ## HITS:1 COG:SPy1508 KEGG:ns NR:ns ## COG: SPy1508 COG4703 # Protein_GI_number: 15675410 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 76 1 76 76 130 94.0 4e-31 MESHLVRIINRLELMTTDSSNLKRNFERDGVVVAEVSFSNDPENGPVFTLRDVEARESYS FDSIDLIAMEIYDLLY >gi|304426803|gb|AEEM01000011.1| GENE 79 70449 - 71135 823 228 aa, chain + ## HITS:1 COG:SPy1507 KEGG:ns NR:ns ## COG: SPy1507 COG0765 # Protein_GI_number: 15675409 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 228 1 228 228 354 83.0 6e-98 MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALVKRTNIKILNWIASFYVWVF RGTPMVVQIMIAFAWMHFNNAPIVGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIE AVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLLQTIGVMELW NGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMGNGGSN >gi|304426803|gb|AEEM01000011.1| GENE 80 71135 - 71869 256 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 233 1 229 311 103 27 9e-21 MSETLISIKGLHKYFGKNEVLKGIDLDIKSGEVVVIIGPSGSGKSTFLRTMNLLETPTKG VITFEDVDITDKKNDIFKMREKMGMVFQQFNLFPNMTVLENITLSPIKTKGVSKAEAEVK AYDLLDKVGLRDKADAYPASLSGGQQQRIAIARGLAMDPDVLLFDEPTSALDPEMVGEVL GVMQDLAKSGMTMAIVTHEMGFAREVADRVIFMDGGVIVEQGTPEEVFEQTKEARTKDFL SKVL >gi|304426803|gb|AEEM01000011.1| GENE 81 72236 - 72712 574 158 aa, chain + ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 27 150 26 149 152 96 43.0 2e-20 MILQNAKVDIPYTVVSVDLPDESVRHLSNLGLKVGASLKVVSKTPTSAIVMLKSSRLAFD QSILNHIDVTEEEGELETLPLSELKVGEFAYVDGIYAINEAKRRLMDMGLTRHTKVYLRK VAPLGDPIEISLRGYELTLRKSEAQMISVVKVDSEEKK >gi|304426803|gb|AEEM01000011.1| GENE 82 72709 - 74847 2453 712 aa, chain + ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 1 693 1 700 709 764 54.0 0 MTEIALIGNPNSGKTSLFNLLTGTSQRVGNWPGVTVERKSGTVKKHSDWKVQDLPGIYSM SPYTPEEKVARDYLLSNHADSILNVVDATNLERNLYLTTQLIETGIPVTVALNMSDALKG QGKTINIDKLSYQLGVPVVSTSAVKNIGVEKAVKKAAHTTKETVDIIQYPTYSDKFEAAI KQIIDILGDIVPERSARFYAIKLFERDALVQNEVELSEFQKGEINEVIKITEEIFTEDSE SIVINERYEFIERVAKMAQNQDSNFKMTISDKIDRVVTNRILALPIFAVVMFLVYYLSIQ TVGTMWTDWVNDVLFGDLVPNWVQAGLDYLHVSGWLESLIIDGIVAGVGTVLGFLPQIFV LFICLGILEDIGYMSRIAFVMDRVFRRFGLSGKSFIPMLIATGCGVPAIMASRTIENERD RRITIMTATFMPCSAKLEIIALIAGAFFPDNPFVAPSTYFIGFLTIILSGIALKKTSFLG SYVSPFIMELPAYHMPKVWSVLHYAFGKAMSFVKRAGTIIFSLTVIIWFMSSYDFAFQAV DTEYSILAALGRAIAWIFQPLGFGDWKATVAAATGLAAKEAVVGTFGVLYNDSTTSGLYH ALQLDYTSLAAYSFLTFNLLCAPCFAAMGAIKREMGDAKWTIGAIGFQTGLAYVVSLIIY QLGLVVFYGKGITFWTIVAVILLIAIIYFIVRKPRQVKEKVITLDNLEMAGE >gi|304426803|gb|AEEM01000011.1| GENE 83 74852 - 74992 67 46 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0621 NR:ns ## KEGG: GALLO_0621 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 14 46 14 46 46 63 100.0 2e-09 MATIIIAAIIAFAVFMGFRSFIKGKGSCGDCDCNCPVKDEMHKTSK >gi|304426803|gb|AEEM01000011.1| GENE 84 75139 - 75993 1155 284 aa, chain + ## HITS:1 COG:SPy1502 KEGG:ns NR:ns ## COG: SPy1502 COG0190 # Protein_GI_number: 15675405 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 281 1 281 284 441 78.0 1e-123 MATIIDGKALAVKKQTELVEKVEKLKAETGVVPGLVVILVGDDPASQVYVRNKERSAKKA GFLSETVRLSESISEEELIQVIEQYNEDDRFHGILVQLPLPVHINDKRVILAIDPKKDVD GFHPINTGHLWNGRPVMVPCTPAGIMELLREYDIDLEGKTAVIIGRSNIVGKPMAQLLLD KNATVTLAHSRTRHLARVTKQADVLIVAIGQGHFVTKEFVKEGAVVIDVGMNRDDNGKLI GDVKFDEVEPLASFITPVPGGVGPMTITMLMEQTYQSALRSVKA >gi|304426803|gb|AEEM01000011.1| GENE 85 75990 - 76826 333 278 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 [Marinobacter sp. ELB17] # 12 272 235 498 503 132 35 1e-29 MIIDELLARQVITKRQLHSHKGTYGRVLLIGGFYPYGGAIIMSALATVKSGAGLVTVATE RDNIAALHSHLPEAMAFDCDDKELFYENLTKADVVLIGPGLGENSKAEAVFQMVLEHISE HQILIIDGSALNLLAKAKPITVKTNHLILTPHQKEWERLSGIAISNQTIENTKAALQEFP EKTVLVAKSHQTKIIQGNQVGELTVGGPYQATGGMGDTLCGMIAGFVAQFKDNLFNSVAT ATYLHSYIADQLSDQAYVVLPTTISAELPRIMKELSER >gi|304426803|gb|AEEM01000011.1| GENE 86 77063 - 77686 499 207 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0624 NR:ns ## KEGG: GALLO_0624 # Name: not_defined # Def: conserved hypothetical lipoprotein # Organism: S.gallolyticus # Pathway: not_defined # 1 207 1 207 207 286 99.0 3e-76 MKKSCKITVTLLCSVLLLGACSKKEKSSQVSTSHSKVTQVSKSSIKKKKVTKNSSSTELS SSISAPNNQDSSNDRSVAESGEVGTQENSQSTTPTTASSISVENIANGDFSTIAGTWSND LGESVTVDSNGQANVSGDSDPYSVVSGTIEGNVFFGGIFNPIYEVGGAAFIVIPAGTANP YSGEVVTVDTIVIGQSGDANQHPYYRN >gi|304426803|gb|AEEM01000011.1| GENE 87 77707 - 80709 2851 1000 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0625 NR:ns ## KEGG: GALLO_0625 # Name: not_defined # Def: putative cell wall associated protein # Organism: S.gallolyticus # Pathway: not_defined # 1 829 1 827 897 1322 89.0 0 MKKSMFGCEEQRFGIRKYSVGVASVLIASVLVMGGQTVAADDVVSADAISTELVTDVQEE SENSSAISESNVQADVTTEDENTEAVTSDETDEQAVSQVANENQPEETDDVAKEEQVEES NATETSEAREVESNENEVVTINVAQASKNVQTNQARVFEESKIPVTANNLPNQGYYTYTK QTEVKNTPKASAPVAFYANAGDRIFYDQVLSEDGYQWISYKSYSGQRRYAAIQKLTPTAV QKLSGKINIQNVSSQGFEVLVTDVSDPNGVVTVKLPVWTDKNDQDDIIWYDGVKQSNGDY KVSVKTAEHKGETGNYNVHLYYLEQNGKLQGIGAEKVTVPEKTTGAQNIPEQGSYTFNEV VEVKNEPKMSAPTEFTFEKGFKLGYYDKVLEADNHQWISYVSYGGVRRYIPIATLKTQAP TGKVDIQNHTNGDFDVIVSDVSDSNGIKAVKVPVWTVKNDQDDIIWYDAVKQSDGTYKVN VKLSEHKNERGDYNVHLYYQESDGTMRGVLGTKTTVAEAKASVTGKVDIQNHTNGDFDVI VSDVSDSNGIKAVKVPVWTVKNDQDDIVWYDAVKQSDGTYKVNVKLSEHKNERGDYNVHL YYQESNGAMRGVLGTKTTVAEAKTSVTGKVDIQNHTNGDFDVIVSDVSDSNGIKAVKVPV WTVKNDQDDIIWYDAVKQSDGTYKVNVKLSEHKNERGDYNVHLYYQESNGAMRGVLGTKT TVEAPKTSVTGKVDIKNHANGDFDVIVSDVSDSNGIKAVKVPVWTVKNDQDDIIWYDAVK QSDGTYKVNVKLSEHKNERGDYNVHLYYQETDGKMRGVLGTKTTVAEAKLSGQLAITNQS PQGFDVIISEVSNPNGVKTVKVPVWSTQGGQDDIIWYNATKQNDGTYKVAVNVKDHKNNS GEYNVHLYYEQNDGSLKGVSATRTTVEAPKSQPAPDMPQSGTYVFTSPKEVKSQPKVSAP TEFTLDKGYQIHYDQAFSADGHQWISYVSYGGLRRYVLIN >gi|304426803|gb|AEEM01000011.1| GENE 88 80784 - 81335 343 183 aa, chain + ## HITS:1 COG:BS_yciB KEGG:ns NR:ns ## COG: BS_yciB COG1376 # Protein_GI_number: 16077404 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 51 182 60 193 194 127 48.0 8e-30 MQKKFSKRITVLFLALCFIILSYCLYRNTNKAIQPRQQEVQIQEKNEKKVYPNLANYSNV SILVSIKQQKMIIYSGNQVIFKTTVSTGAKDSPTPTGKFAIEAERGDFFYNEESSEGAYY WVSFKDHGTYLFHSVPTDCNGNEIKEEAEKLGTPCSHGCVRMSKEDAKWFYENISEGVIV SIH >gi|304426803|gb|AEEM01000011.1| GENE 89 81684 - 83012 1679 442 aa, chain + ## HITS:1 COG:SPy1500 KEGG:ns NR:ns ## COG: SPy1500 COG1570 # Protein_GI_number: 15675404 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Streptococcus pyogenes M1 GAS # 1 442 1 442 446 644 76.0 0 MSDYLSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPTHQYFSLKDENAVIQATMWA GTFKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEA GYFDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQE VAANIAKANERDDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHETDTTL ADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRVIKQKQERLDKLAKSV IFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRRYQER LEAFQRLLISNMTSQYDSKLARFEKAQDALLSLDTSRIIARGYAMVQKNEEIISSVTDVT VGDQLTVRLKDGQLEVEVKDAK >gi|304426803|gb|AEEM01000011.1| GENE 90 83002 - 83217 329 71 aa, chain + ## HITS:1 COG:SPy1499 KEGG:ns NR:ns ## COG: SPy1499 COG1722 # Protein_GI_number: 15675403 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Streptococcus pyogenes M1 GAS # 1 70 1 70 71 77 81.0 7e-15 MPNKKTFEENLQDLEAIVTKLENGDVALEDAIAEFQKGMVLSKELQKTLESAEKTLVKVM QADGTETEMDA >gi|304426803|gb|AEEM01000011.1| GENE 91 83217 - 84086 1171 289 aa, chain + ## HITS:1 COG:SPy1498 KEGG:ns NR:ns ## COG: SPy1498 COG0142 # Protein_GI_number: 15675402 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 289 1 290 290 372 68.0 1e-103 MDKLNEINQAIRRYYAQSDVVSPELIEAILYSVEAGGKRIRPLIFLEILEGFGIELTEGH FDVAAALEMIHTGSLIHDDLPAMDDDDYRRGRLTNHKKFDEATAILAGDSLFLDPFGLVA NAALSADTKVRLIAELSQASGTYGMVGGQMLDMKGEERKLNLSELQMIHANKTGKLLTFP VVAAGIVANLAADDLKSLREAGSLVGLAFQVRDDILDVTATFEEIGKTPKKDLLADKATY PSLLGLEKSYDILNQSIDQALAIFQKLSETQAFNTGKITEMIERLRLHA >gi|304426803|gb|AEEM01000011.1| GENE 92 84079 - 84903 995 274 aa, chain + ## HITS:1 COG:SPy1497 KEGG:ns NR:ns ## COG: SPy1497 COG1189 # Protein_GI_number: 15675401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Streptococcus pyogenes M1 GAS # 1 274 1 275 275 437 81.0 1e-122 MPKERVDVLAYKQGLFETREQAKRGVMAGLVVNVINGERYDKPGEKIDDGTELKLKGEKL KYVSRGGLKLEKALQVFEISVDGQTTIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVW KLRQDERVRSMEQYNFRYAELADFTEGQPTFASIDVSFISLNLILPALHNILADNGQVVA LIKPQFEAGREQIGKNGIVRDRAVHQKVLENVTDFALNYGFTVKGLDFSPIQGGHGNIEF LAHLEKSADAQNLVTAMIPKIVEKAHKEFKDEKE >gi|304426803|gb|AEEM01000011.1| GENE 93 84890 - 85360 625 156 aa, chain + ## HITS:1 COG:SPy1496 KEGG:ns NR:ns ## COG: SPy1496 COG1438 # Protein_GI_number: 15675400 # Func_class: K Transcription # Function: Arginine repressor # Organism: Streptococcus pyogenes M1 GAS # 1 153 1 153 156 184 64.0 8e-47 MKKSERLELIKKIVAENAVETQHDLLKLLEAEGLTLTQATVSRDMNEIGIIKVPSPEGPY IYGLSKDKTKKVGQVSVPIKSTVLAISEETAGLENMINLDVIPGNSRLIKRFLLEDFKDV IFSIIADDDSLLVVAKTAEGAAAIRQEVLKWMKDRN >gi|304426803|gb|AEEM01000011.1| GENE 94 85374 - 87032 1987 552 aa, chain + ## HITS:1 COG:SPy1495 KEGG:ns NR:ns ## COG: SPy1495 COG0497 # Protein_GI_number: 15675399 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 552 1 552 553 742 73.0 0 MLLEISIKNFAIIEEISLTFENGMTVLTGETGAGKSIIIDAMNLMLGARASLDVIRHGAN KAEIEGLFSVGENPALTQILEENGIDVTEELIIRRDILQNGRSIGRINGQMVNLTTLRAV GQYLVDIHGQHDQEELMKPNMHIRMLDEFGNEQFADVKKHYQELFESYRQLRKRVVTKQK NEQEHKARIEMLEFQIAEIEAAALKAGEDQTLNQKRDKLLNHKNIADTLTNAYVMLDDEE FSSLSNIRSAMNDLMTLEEFDADYKEMSANVSEAYYILEEVTKHLGDVIDDLDFDAGSLQ QIEARLEVIYSITRKYGGSVDDVLEYYDNITKEYNLLTGSDESSDDMEKALKRLEKELIV AAEELSQERHALAKDLEAEIKQELADLYMEKADFQVQFTKGKFNRDGNEAVEFYISTNPG EGFKPLVKVASGGEISRLMLAIKSAFSRKEDKTSIVFDEVDTGVSGRVAQAIAQKIYKIG SNGQVLAISHLPQVIAIADYQFFIEKRSDENTTVSTVRLLTEEERVEEIAKMLAGSDITE MAREQARELLKK >gi|304426803|gb|AEEM01000011.1| GENE 95 87169 - 88005 1030 278 aa, chain + ## HITS:1 COG:SP1112 KEGG:ns NR:ns ## COG: SP1112 COG1307 # Protein_GI_number: 15900979 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 277 1 277 279 366 69.0 1e-101 MSKIKIVTDSSLTIEPELVEKYDITVIPLSVMIDGVVYSDSDLKEEGKFLNMMRNSKELP KTSQPPVGVFAEVYESLMKNGAEHIVSIHITHTLSGTVEAARQGANLAGADVTVIDSTFT DQCQKFQVVQAAKLAQEGGSLEEVIAKVEEVRQKSELYIGVSTLENLVKGGRIGRVTGLI SSLLNIKVVMEMVDCELNPIIKGRGLKTFNKWLDNFIEYAKGKKVAEIGISYCGTADMAN GFKEKLQVLGAPIAVLETGSIIQTHTGENAFAVMVRYE >gi|304426803|gb|AEEM01000011.1| GENE 96 87998 - 88846 854 282 aa, chain + ## HITS:1 COG:SPy1492 KEGG:ns NR:ns ## COG: SPy1492 COG2755 # Protein_GI_number: 15675396 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Streptococcus pyogenes M1 GAS # 5 269 10 274 286 367 66.0 1e-101 MSKKKNILTGFAFFLASLLLFIVIFSVLIPKSDTELTKKDFLAQEATPFNYVAIGDSLTE GVGDTTNQGGFVPLLTQSLTDTYDYQVTDSNYGVSGNTSKQILQRMQEKTDIQKSLAKAD MMTLTVGGNDVMAVIRKNLTSLSVSSFTKPAKSYQKRLRQIIELARADNEDLPIYILGIY NPFYLNFPDMTEMQEIVDNWNDATESVTEEYDNVYFVPINDELYKGINGEEGIVSTSGDQ TTVINDALFSGDHFHPNNIGYQIMSDVTMEKISETKEEWKEN >gi|304426803|gb|AEEM01000011.1| GENE 97 88875 - 89417 626 180 aa, chain + ## HITS:1 COG:SPy1491 KEGG:ns NR:ns ## COG: SPy1491 COG4698 # Protein_GI_number: 15675395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 178 18 195 195 239 66.0 3e-63 MAINIAFVGVIASRLIQVREPAAENVSSKQTDSVKVGTFSTNREQLNETVAAYLEDYQTD QMSYTVYATSSAIMFEGTYTLLGYEVPLYIYFQPSRLDSGAVQLKITSFSVGTLSLPESE VLKYIKSSYKLPSFVEVLPDESAININIQNLENDADIYLEATTIDLVGDQFNFDIYKKND >gi|304426803|gb|AEEM01000011.1| GENE 98 89512 - 89787 172 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE] # 4 91 6 93 96 70 37 5e-11 MANKQDLIAKVAEATELTKKDSAAAVDAVFSAIESFLSEGEKVQLIGFGNFEVRERAARK GRNPQTGEEIEIAASKVPAFKAGKALKDAVK >gi|304426803|gb|AEEM01000011.1| GENE 99 89974 - 90180 308 68 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0637 NR:ns ## KEGG: GALLO_0637 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 68 1 68 68 88 97.0 7e-17 MDKSLLIVVIFLGVFSILKVIMFIAYSFVMKPKVDENGKVIEQGKTEKTEEETEEAHQKE DDDFWNNW >gi|304426803|gb|AEEM01000011.1| GENE 100 90584 - 92077 1417 497 aa, chain + ## HITS:1 COG:L104437 KEGG:ns NR:ns ## COG: L104437 COG3104 # Protein_GI_number: 15672684 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Lactococcus lactis # 7 494 6 493 497 675 72.0 0 MECMGKKIEKTFFGQPKALFTLFQTELWERFSYYGMRAILIYYLYASVTAPNAGLGLPKT QAMAIVSIYGALVYLSGIIGGWFADRILGASQTIFIGGILITLGHIVLAIPFGLTSLFIS LFLIILGTGMLKSNISNMVGHLYAADDPRRDTGFNIFVVGINIGSLLAPIVVGTVGESIN YHLGFSLAAIGMIFALFVYWFGRMKQFPELGNKPSNPLSQEEKQSLLVKLGVALVIILIA GFFVYRLNPSNFVNNVINVLSWAGIVIPFIYFATMFTSNKVSSTERKQLLAYLPLFLSSI VFWLVEEQSSTVIAVWGETRSNLNPTILGVTIHIDPSWYQLLNPLFIVILTPAFVWLWNK LGDRQPSAVSKFGLGLLLTGISYLIMAVPGILYGTHGRVSFMWLVVMFAVQMSGELLISP VGLSVSTRLAPLAFQSQMVALWFLADSTSQAVNALITPSFNKGTEVAFFGILGLICIGIG VVLFLVKKPILNLMRND >gi|304426803|gb|AEEM01000011.1| GENE 101 92185 - 93120 811 311 aa, chain - ## HITS:1 COG:SPy1432 KEGG:ns NR:ns ## COG: SPy1432 COG0167 # Protein_GI_number: 15675344 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 1 311 1 311 311 527 78.0 1e-149 MVSTATKIGAFDFDNCFMNAAGVYCMTREELAEIDASAAGSFVTKTGTLTARAGNPEPRY ADTSLGSINSMGLPNNGFQYYLDYVTELQNTPNSKHHFLSLVGMSEEETHTILKAVQDSD YQGLVELNLSCPNVPGKPQIAYDFETTETLLRDIFTYFTKPLGVKLPPYFDIAHFDRAAA IFNQFPLTFVNCINSIGNGLIIEDETVLIKPKNGFGGIGGDYVKPTALANVHAFYQRLNP SIQIIGTGGIKTGRDAFEHILCGASMVQLGTILHQEGPAVFERITNELKAIMEEKGYKSL EDFRGKLKYID >gi|304426803|gb|AEEM01000011.1| GENE 102 93220 - 94215 993 331 aa, chain - ## HITS:1 COG:lin0622 KEGG:ns NR:ns ## COG: lin0622 COG0604 # Protein_GI_number: 16799697 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Listeria innocua # 21 329 19 312 313 167 37.0 3e-41 MKAFALTDSSQRAISDLAIIDIPKPKISADDVLVKVTAVGLNPVDFKVIENGVDAWTFPH IIGMDVVGEIVELGEHVTQFQIGDRVAGHGNLTKQGCLAEFASVPAYQLAKIPGGISHTD AAALLCNGLTAYQALFRKATLANKKTILIHAGSGGVGSIAIQLAKMAGLTVYTTASTAKV DFVKSLGADIVIDYKTENVSRRIAELTDGLGVDMIINTIGKDESTEDLKRLAYNGSLIAV VSPPRIDNPSDLFSRALSIDVLNLGGAHLSHNPQQAQDLATMTEELFVLAQEQKVKALVS QTFPFKQTKEALQLIKDRKVTGKLVIDMNLN >gi|304426803|gb|AEEM01000011.1| GENE 103 94383 - 94697 330 104 aa, chain + ## HITS:1 COG:PAB0625 KEGG:ns NR:ns ## COG: PAB0625 COG0640 # Protein_GI_number: 14521139 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pyrococcus abyssi # 9 103 21 116 118 85 50.0 2e-17 MIEDSQTQQLLEGELLENVSDFFKALGNGTRLQIIWYLSQGELKSSELAAILQMSPSAIS HQLTLLKNLKIVSVRREGKNQIYALADKHISQVLDSVVEHYEED >gi|304426803|gb|AEEM01000011.1| GENE 104 94700 - 96583 1633 627 aa, chain + ## HITS:1 COG:PAB0626 KEGG:ns NR:ns ## COG: PAB0626 COG2217 # Protein_GI_number: 14521140 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Pyrococcus abyssi # 38 624 111 688 689 567 51.0 1e-161 MSEKNKKSLRRILLATLGFLLVFGVVKATQPSLPVQAALYAIPYLIAGYDVLRKAVLKIS KGKVFSEHFLMTIATLGAFVLSFMTNESEFAEAVFVMIFYQVGELFEHIAEGSSEKSIAE LLNLRPDLVHLEKGDEVVDIDPQEVQEGQIISIHPGEKVAIDGILIAGESSVDTAALTGE SLPQTVQVGDQVLSGMINMTGVIRVKVLHSVKDSTLSKILDLLENSAANKSKSEYFMTKF AAVYTPTVVIAAVILAVLPPLVSGDFAGNFPEWFSRVLTFLVISCPCALVISIPLSFFGG LGACSKAGVLVKGSNYLESLASLESLLFDKTGTLTEGVFEVTALHPNDITDEQLLHLASH VERFSTHPIAQSLREAYEKEADDCSITDVTEKSGYGVSAIINGHNVAVGNTKFMDSLGAK WKACSKVGTIVHVAIDGAYAGHIVISDCIKSDTEEALEQFKQAGVKHLVMLTGDRRAVAE KIADELGITDYQAELLPTDKVDELEKYLAKKSPRTTVGFVGDGINDAPVLARADVGIAMG GLGSDVAIEAADVVIMNDQLSKIAKAIKIARKTIRIAHENIIFSIGIKVLVLLLASFGMA NMWLAIFADVGVTILATLNAMRTMTLT >gi|304426803|gb|AEEM01000011.1| GENE 105 96743 - 97063 412 106 aa, chain + ## HITS:1 COG:L124677 KEGG:ns NR:ns ## COG: L124677 COG2076 # Protein_GI_number: 15672104 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Lactococcus lactis # 1 106 12 117 117 99 60.0 1e-21 MTWIYLIFAGILEVVWATSMKLSENFSRLGYSMVTILGMILSFVFLARALKDLPMSLAYP IWTGIGAIGTVVVGIIFLKDQLSPLAYLFLILVVIGIIGLKMTSGH >gi|304426803|gb|AEEM01000011.1| GENE 106 97280 - 97972 1088 230 aa, chain + ## HITS:1 COG:SP1655 KEGG:ns NR:ns ## COG: SP1655 COG0588 # Protein_GI_number: 15901490 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Streptococcus pneumoniae TIGR4 # 1 230 1 230 230 422 91.0 1e-118 MVKLVFARHGQSEWNKANLFTGWADVDLSEEGTKQAIEAGKLIKEAGIEFDLAFTSVLKR AIKTTNLALEAADQLWVPVEKSWRLNERHYGGLTGQNKAEAAEKWGDEQVHIWRRSYDVL PPAMAKDDEYSAHTDRRYANLDDTVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVG AHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFEFDEKLNVTNEYYLGK >gi|304426803|gb|AEEM01000011.1| GENE 107 98120 - 98269 115 49 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 1 49 339 387 387 59 55.0 1e-09 MLYAGIQPKDLQHRLGHSDISMTLNTYVHATKEGAQKSASIFENAINSL >gi|304426803|gb|AEEM01000011.1| GENE 108 98353 - 99282 490 309 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 1 302 1 302 387 441 75.0 1e-123 MNIKEVKKKNGTIVYRANVYLGTDRLTGKKARKNITASTKKGVKTKAREAVNEFINNGYT TKTKATIKTYKELASLWWDSYKNTVKPNTQQSTKGLLKVHILPVFGDYKLDKLTTPIIQQ QVNKWADRANKGVKGAYANYNLLHNVNSRILQYGVTMQLIQHNPARDVIVPRKKQKEKTK IKFLDRQELKQFLNYLNTLDQSDYESLFDFVLYTFLLATGLRISEALALEWSDIDLESGV VSVNKTLNRYQEVNPPKSKAGYRDISIDKATILMLKQYKNRQQVQSWQLGRSEKVVFSVF TENMLMLAI >gi|304426803|gb|AEEM01000011.1| GENE 109 99399 - 99953 463 184 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNIKNNLKDLRLSKKLTQQELANQLNSIRLDEMKPISKMNISNWENGKHSIKPDVARLI ADYFEVPLSYLLGYEKEINSTLNDVLPTAIQDTNEQYEHYLELYKSSVAGVNEQLDNVAN SLNPDKKFSLEETSKFLIALAGEIAKLEASSETLLELKDIQIKNLTMKHEFERFKNYFEN KQHS >gi|304426803|gb|AEEM01000011.1| GENE 110 100068 - 100253 305 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|77410867|ref|ZP_00787224.1| ## NR: gi|77410867|ref|ZP_00787224.1| repressor-related protein [Streptococcus agalactiae CJB111] # 1 61 1 61 61 67 57.0 2e-10 MIITGIQARAVRRKQADNMLTAKATAQAIGISPITYKKVVQGGKVKNTVYVKVMNWLVED Y >gi|304426803|gb|AEEM01000011.1| GENE 111 100594 - 100905 357 103 aa, chain + ## HITS:1 COG:no KEGG:MGAS10270_Spy1945 NR:ns ## KEGG: MGAS10270_Spy1945 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 9 100 6 97 110 85 47.0 7e-16 MKLKSVENKVNPFSLAHYTEEEKAVFKKQDESKKRAEEFFKEMYDQSTAWVIVANVMVVY HNIYTGWAETFEQAWNALGYDITSDIVYRAVNGLSAKKQERRG >gi|304426803|gb|AEEM01000011.1| GENE 112 100909 - 101055 102 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIYQEINLPIWAQLVLIVVLILVLLLLAYIKPVEDVEEENDKNHPIIM >gi|304426803|gb|AEEM01000011.1| GENE 113 101118 - 101384 247 88 aa, chain + ## HITS:1 COG:no KEGG:MGAS10270_Spy1943 NR:ns ## KEGG: MGAS10270_Spy1943 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 1 87 35 121 122 72 50.0 6e-12 MNAFSVEFEQGLLERVDELSERKLELERRLQKQTGLISAKELKEELDITGATLTNWVKLG LKVYQPPFESSKKQYFRVSDVINFLTVR >gi|304426803|gb|AEEM01000011.1| GENE 114 101389 - 101937 211 182 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2139 NR:ns ## KEGG: GALLO_2139 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 182 1 182 182 290 80.0 2e-77 MYQFINLQINKQVLPLFSFLKDNPTRTIAKDNHVMMTYYQPQNFHIAPFSYKGITVTVTV TDELESYLTDGWQVARNYKIATVQNELLRVLSDLEQEYLSRARAGNTVAINGIVYSWIAY GLSSTEDVIGFVKLFYLNGYSYEQITQLYASLTKSNKFNICFLNTINTIFKEGLNERIFR TA >gi|304426803|gb|AEEM01000011.1| GENE 115 101912 - 103315 892 467 aa, chain + ## HITS:1 COG:L109011 KEGG:ns NR:ns ## COG: L109011 COG5545 # Protein_GI_number: 15672499 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase and inactivated derivatives # Organism: Lactococcus lactis # 50 452 70 470 480 163 30.0 9e-40 MSEFLEQLDEIVPDDSGKVINLANEQLKRDSNGNVKKTRNNLSLLFRGADKRLDKLFKYN EATKNVEVTRNQELSDYITVNHGLLSDDTIRQLWAYLSEEWGLEYKENDIVNIVKVVALN QRYNPIKIMLEKAKVMARPVDPFTVIQKYINIEDNQYNRLVFDLVFRGAIARVFSPGIQF DYCLDLVGKQGTGKTTFLREIFKGFYGEISSYTEKDDLLKMLELWAVNDDELVASNKVSF NDLKRTITMREIKVRPPYDRTTVTFPVDFIFTRTTNDTGHLKDSTGDRRFLGVEVLERQE GQLNQISEQDLIDIWGNYYKAYETNSKLYYDDASEEGKLIAREREKYKYQDDIIEKLEWY LSTKIPEDFYKPTTKKHERKQYYTDMEELGVAYKNNSDREAGTEWVGIIERDRLNINDVL YEIFNEDPEPQTKIKAKIKMYMNNLDGWKYQKNIKFGGRVVSGFYKL >gi|304426803|gb|AEEM01000011.1| GENE 116 103707 - 104141 411 144 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEQEYFDYCSRELTRYEARRYQFMGMEWEDLNTADHTKLLEIGNKVMNEDSSLDLYLLN RDTDTRFKVWNMVARTALHYDKKFPTEDKLKLFSNHLERHFKNMVNRVLERADYNKLNQL FKELDLPEDVAEQFKRNMALAGLV >gi|304426803|gb|AEEM01000011.1| GENE 117 104353 - 104535 96 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTFEDIQPLESIADLLNQGWIILEKDGIIRKIRGVEYGSVEIHFKSGQPYLRTTHTDKLI >gi|304426803|gb|AEEM01000011.1| GENE 118 104632 - 105210 655 192 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQSNVLPKIQEIVSQVNTKRDVLDDYKQKLDTAKVELEQAKADRKASFTFETDTKVVEL ESFISRIERRYTELKQSFEIDLPVNLREVEKLYNDYVSEKWATDTGVKELTQQTLESFKS TINLLNQYTSKPSEINKQALSEVVNDEFKRAFSGEMTFIGANNYSLATAIPINNTTYQDL YSAGRKLGIELK >gi|304426803|gb|AEEM01000011.1| GENE 119 105207 - 105497 96 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSYKKYHTALVFSIVLHTLLKDTDLEHKALYLYADIIELENIPTYHIQTANTQAKRILKA IDEDEIKVPSPFTALQRIQQKWRETINWMKNLRRNR >gi|304426803|gb|AEEM01000011.1| GENE 120 105467 - 105850 208 127 aa, chain + ## HITS:1 COG:no KEGG:SP_1140 NR:ns ## KEGG: SP_1140 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae # Pathway: not_defined # 2 127 6 131 142 147 73.0 1e-34 MDEKLTPKQVKFIDAMLTEPTIEKACQKAGVSRATGHKYLKMTVVKRTIQTKQAEIMDMT TQSLYTASSNAITVLNSIMTDKKVNPFVRTQAAKTILEQAYKAYEFVGVVKQIEEVRAEI EEISKGN >gi|304426803|gb|AEEM01000011.1| GENE 121 105825 - 106205 82 126 aa, chain + ## HITS:1 COG:no KEGG:SP_1141 NR:ns ## KEGG: SP_1141 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae # Pathway: not_defined # 24 125 2 103 103 119 59.0 4e-26 MRKYLKEINNLKELAERLKVREFPFCIVVNGSEELGEFFEVGSELFNDDELLANIKKWKE WEVPIIIDDWSNRNIDIDKMEILYFPTQEDFIDYTRVKKNLAPLYHELDNPYTTISKSEW LKILDR >gi|304426803|gb|AEEM01000011.1| GENE 122 106223 - 106603 247 126 aa, chain + ## HITS:1 COG:no KEGG:SPH_0094 NR:ns ## KEGG: SPH_0094 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 123 1 123 130 109 51.0 4e-23 MTKKKIERISIMYKKEIMWLKCFFLSDNHNPKGTILERKIHDSFLANKTDEAAFYVNLNM VTREVISETDELLVRVLKEVYVYENMDIEEACQKILFLNRLEAYNRLDKWFDRYFYQTYK YLLPIR >gi|304426803|gb|AEEM01000011.1| GENE 123 106741 - 106950 193 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKINLRQFIGKNVKIVSISDSVWTGKASALDLAVNSDEMEYDELILDTDNKKGTVVFPE NEIKSIEVI >gi|304426803|gb|AEEM01000011.1| GENE 124 107221 - 107760 282 179 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKKWKNRSFATDFIFKGLGVIFIFITMLLLFNFLISGNFYADRFWTMVSGVITTIAAFI AIIVFARRAIIEGYYLSALDYAMATFYDELETNKELFQLYNSIRTKYNPKSDIFKKEFEE LQAHYCYLCFKNYIHNMNSIEKLIICLYSYFTIADFSTHLELRKASQKEWFENDHNDFV >gi|304426803|gb|AEEM01000011.1| GENE 125 108001 - 108228 395 75 aa, chain + ## HITS:1 COG:no KEGG:SSU98_0615 NR:ns ## KEGG: SSU98_0615 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_98HAH33 # Pathway: not_defined # 1 75 11 85 85 107 76.0 2e-22 MSIVSLRLNEKEEELFRSYSIHTGKTLSELFKTALAEQIENQLDYETGIQALKEFKKNPV THSIDDIIEEFENDL >gi|304426803|gb|AEEM01000011.1| GENE 126 108218 - 108487 261 89 aa, chain + ## HITS:1 COG:SP1223 KEGG:ns NR:ns ## COG: SP1223 COG2026 # Protein_GI_number: 15901085 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Streptococcus pneumoniae TIGR4 # 3 87 2 84 84 83 50.0 1e-16 MTYRLVVSDKVKKQLKKMDKHVRLMLAKDMKKHLDGLENPRQIGKALIGQFKGLWRYRIG NYRVICDIMDDELVILAIEIGHRKDIYKN >gi|304426803|gb|AEEM01000011.1| GENE 127 108534 - 108620 77 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIKGRTFLTPLETDFVSAVGGGTVLLFV >gi|304426803|gb|AEEM01000011.1| GENE 128 108867 - 109433 438 188 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0645 NR:ns ## KEGG: GALLO_0645 # Name: not_defined # Def: putative transcriptional regulator # Organism: S.gallolyticus # Pathway: not_defined # 1 188 1 188 188 295 98.0 4e-79 MEILREINITKDKKLAIWLNIISLPTFFLFFYLFYLLGLKIQHPTIENVIYTIHLGKLFL FVLAILAVVIIHELIHAFFFKLFKPKSKVKFGINWKLGAAYATCPKVTYDRWQMIVISLA PFIIWSLTLTILFGMNLLSFPAYVGIASLHATGCIGDFYYVYLLDIKYARKKILAEDTAV GLIIYSKN >gi|304426803|gb|AEEM01000011.1| GENE 129 109684 - 110205 605 173 aa, chain + ## HITS:1 COG:SPy1427 KEGG:ns NR:ns ## COG: SPy1427 COG1827 # Protein_GI_number: 15675342 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 171 173 192 57.0 2e-49 MKAAERRQKIIDILSQTQVPISASSLASRLGVSRQIIVGDVALLRAANHDVISTPKGYVM SQALYSHQFIGKIACQHGPERTKEELDSIVAKGGIVVDVEVEHPVYGMLTAPLDIRSNED IANFMDKVEHSNATLLSSLTHGIHTHTLSCHSKDDFEDIKEMLLDKGLLLKSN >gi|304426803|gb|AEEM01000011.1| GENE 130 110402 - 110956 642 184 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0647 NR:ns ## KEGG: GALLO_0647 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 184 1 184 184 280 98.0 3e-74 MRRNQTKSLAFTAILVAFGILIPMVMPVKVVIGPASFTLASHVPIFMAMFISPQVAVLVA LGTSLGFLLAGFPIVIVLRAVSHLLFAVVGAILVQKRPSLLEKPLSTFLLALFLNFLHGL AEFIVVLVLTAGAHTGAAYVWSLVGLIGFGSLVHGCIDFYIAYYLWKFLRDKVGVDFSVT SKED >gi|304426803|gb|AEEM01000011.1| GENE 131 111111 - 113264 2778 717 aa, chain + ## HITS:1 COG:SP1673 KEGG:ns NR:ns ## COG: SP1673 COG0768 # Protein_GI_number: 15901508 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Streptococcus pneumoniae TIGR4 # 41 710 8 673 680 642 52.0 0 MSFKKRLSKLKFAKKTTKTSKTTEKNEKKVRKFKIVKKPTSMTKRIYLIFSIIVVLFSII ILRLAQMQILNKSFYDEKLNSSTTYTVTTSNPRGEIYDAAGNLLVSNTVKQVVAFTRSNT ITAEEMKELAAKLSTLVTLTETDVTTRQKKDYYLADSDTYAAVVKSLPDDEKYDSYGNNL TESEIYANAINAVTDDEINYSEDELKLVYIFSQMNAASTFSTVNLTTGDLTEEQIAYITA NQSKLSGISIATDWDRETPTSSLASIIGTVSSKDSGLPAEEADDYLAKGYSLNDRVGTSY LEKEYEEYLQGTHTVREITTDKNGNVVSDEVTSEGKAGQNLKLTVNSDFQAGVESILNQY YSADIADGYATYSEGAYAVALNPQTGAILAMAGLSHETGSSTTTLDALGTINDIFVPGSV VKAATLTAGWESGAISGNQVIADQSINIAGSSAITSWFTGSGSTNITAVQALEYSSNTYM VQVALKMMGQEYYSGMSLATTGMKEAMEELRAAYAEYGMGTSTGIDLPENTTGYISDDYS AGNVLTEAFGQYDSYTPMQLAQYAATVANGGKRIAPHLVDSIYDNDGTDGIGTLAKTIET NVLNEINISDDDMDLLQQGFYQVVNSSSGYATGTYMKSSTVTIAGKTGTAETYAVDANGN AVTTVNLSVLAYDYSTSDDSNIAVAVIIPHLTSSDNHTNQYIARDIINLYMSTYVNQ >gi|304426803|gb|AEEM01000011.1| GENE 132 113330 - 113926 744 198 aa, chain + ## HITS:1 COG:SPy1422 KEGG:ns NR:ns ## COG: SPy1422 COG0353 # Protein_GI_number: 15675339 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Streptococcus pyogenes M1 GAS # 1 198 1 198 198 355 90.0 3e-98 MLYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVC GNLTDEDPCNICTDETRDHSVILVVEDSKDVSAMEKIQEYRGLYHVLHGLISPMNGVGPD DINLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDI EYADEVTLLRAIENRTEL >gi|304426803|gb|AEEM01000011.1| GENE 133 114164 - 115210 1465 348 aa, chain + ## HITS:1 COG:SPy1421 KEGG:ns NR:ns ## COG: SPy1421 COG1181 # Protein_GI_number: 15675338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 348 1 348 348 551 76.0 1e-157 MAKETLVLLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFITQSGDFIKTQEFSSKPA DDEKLMTNATVVESQKIKPSDIYEEGAVVFPVLHGPMGEDGSIQGFLEILKMPYVGTNIL SSSVAMDKISTKHVLESAGVPLVAYVTYVEGADLEKAVAEVNEKLTYPVFVKPANMGSSV GISKADDEEGLRSAIDLALKYDSRILIETGVNAREIEVGILGNADVQTTLPGEVVKDVAF YDYDAKYIDNKITMDIPAHIDSSIMEEMRGYATTAFRAIGGCGLSRCDFFLTEDGHVYLN ELNTMPGFTQWSMYPLLWENMGLAYSDLIEKLVELAKEMFEKRESHLI >gi|304426803|gb|AEEM01000011.1| GENE 134 115315 - 115875 455 186 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0651 NR:ns ## KEGG: GALLO_0651 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 186 1 186 186 296 99.0 2e-79 MNLFFKTPKLTLKRLVSLAMLIALAFIVGKFSIPVIPQQLVISLTFIVNTIIGMIGGPIW GFISLGILDVVDTLSSSSAGNFIIWWTLMEAIQGFFYGLFFYGKPLSWSSKKDWLHVTIA TVVIMLIGTFILTPLLIQIYFGVPFWAQYLAGRWLKIFEIPLRIIITMLVIPRLQKIPEL RKLANL >gi|304426803|gb|AEEM01000011.1| GENE 135 116119 - 117483 1733 454 aa, chain + ## HITS:1 COG:SPy1420 KEGG:ns NR:ns ## COG: SPy1420 COG0770 # Protein_GI_number: 15675337 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 1 452 1 452 463 673 73.0 0 MKLTLHEVAKVVGAKNTISEFDDVPLRQIEFDSRKIEKGDLFLPLKGARDGHDFIETAFE NGAVATFSEREVAGHPYIWVDDCLEAFQALASYYLEKQRVDVIAVTGSNGKTTTKDMIAA VLSTEYKTYKTQGNYNNEIGLPYTALHMPDDTEKIVLEMGQDHMGDIHLLSELAKPHIGV VTLIGEAHLEFFGSREKIAEGKLQIVDGMDSDGILIAPADTIVDPYLPESQMVIRFGDGA EIFVKDLQESKESLTFTTNVIDRPITLPVPGKYNATNAMVAAYVGKLLAISDDDIVEALE TIELTRNRTEWKKAANGADILSDVYNANPTAMRLILETFSKIPANEGGKKIAVLADMKEL GEQSVELHKRMIMSLSPETLDTLIFYGEDIAELAQLASQMFPIGKVYYFKKTADEDQFDA MLETVQKVLQPADQILLKGSNSMQLAKVVEALEE >gi|304426803|gb|AEEM01000011.1| GENE 136 117514 - 118650 734 378 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0653 NR:ns ## KEGG: GALLO_0653 # Name: not_defined # Def: putative oligosaccharide repeat unit polymerase # Organism: S.gallolyticus # Pathway: not_defined # 1 378 7 384 384 644 98.0 0 MFRTEESFARFLYRTLYFLEFCLLFLAWFLKRYPFPLPFFLLMSSLAIIGGFAMYLWSFW RSGWSIEKILAGIFALAFLILLPMSNYLETNVDDLSMVTLFLLSASVDKDDERLMTAIFY FKLIVAILVLFAYNSHIISDMTMYRADKDLIRHSYGFMHPNSLGMYLVGLLFDFSLVRKS RKARAGLVMLLVSLLIFAITDSRTTFLIAGVIILCYFLKPLLLKYQVSGSVIIPLVIVMF GLGLGLPYFYNGDSTIYATLNHLFSGRLNIGHTYLQHFGVDWLPRNIPTFTEINGHPMYD DSFYIDSLLRQGIFLFLLYPIFLIAQLRGKKLTLFHTILFLITFFINIMEHYGGSLCMCS ILLINYFAVSEENTVGKY >gi|304426803|gb|AEEM01000011.1| GENE 137 118801 - 120345 2179 514 aa, chain + ## HITS:1 COG:SP0439 KEGG:ns NR:ns ## COG: SP0439 COG4108 # Protein_GI_number: 15900357 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Streptococcus pneumoniae TIGR4 # 1 514 1 514 514 947 92.0 0 MTIQDDIKKRRTFAIISHPDAGKTTITEQLLYFGGEIREAGTVKGKKTGNFAKSDWMDIE KQRGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMAVDAAVMVVDSAKGIEAQT KKLFEVVKHRNIPVFTFINKLDRDGREPLDLLEELEEVLGIASYPMNWPIGMGKSFEGLY DLYNKRLELYKGDERFAALEAGDELFANNPFYQQVLEDVELLEEAGNEFSEEAILSGDLT PVFFGSALTNFGVQTFLDTFLQFAPEPHGHKTTEGNEIDPYDKDFSGFVFKIQANMDPRH RDRIAFVRIVSGEFERGMSVNLARTKKSVKLPNVTQFMAESRENVENAVAGDIIGVYDTG TYQVGDTLTVGKNKFEFEPLPTFTPELFMKVAAKNVMKQKSFHKGIEQLVQEGAIQLYKN YQTGEYMLGAVGQLQFEVFKHRMENEYNAEVVMTPMGKKTVRWIKPEDLDERMSSSRNIL AKDRFDQPVFLFENDFALRWFADKYPDVELEEKM >gi|304426803|gb|AEEM01000011.1| GENE 138 120747 - 122327 1906 526 aa, chain + ## HITS:1 COG:SP1586 KEGG:ns NR:ns ## COG: SP1586 COG0513 # Protein_GI_number: 15901428 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pneumoniae TIGR4 # 1 526 1 524 524 754 80.0 0 MKFTELNLSENILATVEKAGFVEPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL DKIDTNRNLVQALVIAPTRELAVQGQEELFRFGREKGVKVRSVYGGSSIEKQIKALRSGA HIVVGTPGRLLDLIKRKALKLDHVETLILDEADEMLNMGFLEDIEAIISRVPETRQTLLF SATMPEAIKRIGVKFMQNPEHVKVAAKELTTDLVDQYYIRVKEQDKFDTMTRLMDVNQPE LSIVFGRTKRRVDELTRGLKLRGYRAEGIHGDLDQGKRLRVLRDFKNDNIDILVATDVAA RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKHGQSITFVAPNEMGYLSIIEKLTKK RMKGLKPATADEAFKAKKKVALKKIERDFADEAIRANFDKFKGDAVKLAAEFTPEELALY ILNLTVKDPDTLPKVEIAREKPLPFKPSGGGFNNRKGGRGNGRGRDNRRGGRSDRKRDDR DNNGYRDFKRTSSKNKRDFQNKDNKRPRRTSSEKKTGFVIRNKGER >gi|304426803|gb|AEEM01000011.1| GENE 139 122371 - 122643 285 90 aa, chain - ## HITS:1 COG:SP1535 KEGG:ns NR:ns ## COG: SP1535 COG2827 # Protein_GI_number: 15901379 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Streptococcus pneumoniae TIGR4 # 10 90 4 84 99 96 64.0 1e-20 MEKTEEKTKKAYMYVVECADGTLYTGYTTNVEKRIKTHNSGKGAKYTRSRLPVKLIYQES FDSKEAAMSAESYFKQKTRQQKLEYIEEHQ >gi|304426803|gb|AEEM01000011.1| GENE 140 122618 - 123379 659 253 aa, chain - ## HITS:1 COG:SPy1411 KEGG:ns NR:ns ## COG: SPy1411 COG4123 # Protein_GI_number: 15675331 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 247 1 247 258 429 83.0 1e-120 MVKSILKAGERIDQLFSTDVKIIQNKDVFSYSIDSVLLSRFPKIPSRGLIVDLCSGNGAV GLFASTRTKAPIIEVELQERLANMAERSIQLNQLENQVQMINDDLKNLLNHVPRSGVDLI LCNPPYFKVSEMSKKNLSEHYLLARHEIATNLEEICEVARHALKSNGRLAMVHRPDRFLD IIDTMRQYNLAPKRIQFVYPKMGKDANMLLIEAIKDGSTDGLKILPPLFVHKENGDYTDD IFEIYYGKNGRKN >gi|304426803|gb|AEEM01000011.1| GENE 141 123487 - 124233 909 248 aa, chain + ## HITS:1 COG:SP1624 KEGG:ns NR:ns ## COG: SP1624 COG0204 # Protein_GI_number: 15901460 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 246 1 246 249 390 78.0 1e-108 MFYTYLRGLVVFLLWIINGNAHYHNEDKILSKDENYILVAPHRTWWDPVYMAFAARPKEF IFMAKKELFTNRIFGWWIRMCGAFPIDRENPGQKALKYPINMLKKSNRSLVMFPSGSRHS TDVKGGVAVIAKMAKVKIMPVVYAGPMELKGLLTGERVDMNFGNPIDISDIKRMNDEGIE EVANRIQTEFDRLDAENATYHTNKKPNPLTYIYRIPLGLVAIIVVLLTLLFSYIASFVWD PDKHRKMK >gi|304426803|gb|AEEM01000011.1| GENE 142 124328 - 124993 762 221 aa, chain + ## HITS:1 COG:SPy1409 KEGG:ns NR:ns ## COG: SPy1409 COG1555 # Protein_GI_number: 15675329 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 29 221 37 220 220 150 46.0 2e-36 MIEEIKEKLLENKTLVAVLGTILVMLIGFFAWSNVTKTTVDAQSDLPALSTTFSASSSAS DLKTERSSSQTETQKVFVDIKGAVKNEGVYELSSGSRVTDVVKLAGGFTEDADKKSVNLA EKVTDEAVIYVARVGENVAPATTNSQANGSAQQEESSDKINLNTATLAELQTISGIGAKR AQDIIDYRDANGGFSSVDDLANVSGIGEKTLEKLKSEVTVD >gi|304426803|gb|AEEM01000011.1| GENE 143 125244 - 127217 1257 657 aa, chain + ## HITS:1 COG:SPy1408_2 KEGG:ns NR:ns ## COG: SPy1408_2 COG2333 # Protein_GI_number: 15675328 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Streptococcus pyogenes M1 GAS # 359 657 1 299 299 356 57.0 7e-98 MIPDTISVNGDLLSFRGKEAGRTYQIFYTLKSEKEQHFFKTLNQTVVLSGDMDLEEATPQ RNFGGFDYRTYLKHEGIYRVVNLSAINNVELVYKMTLWEKLHDVRRKAIVSIQQHFPAPM QHYMTGLLFGYLDKSFDEMSDVYTSLGIIHLFALSGMQVGFFVGAFRFFFLRLGLRRDYV DILQIPFSLVYAGLTGFSVSVIRSLIQSAFANLGIKKLDNLALTLFVLFIVMPNFLLTTG GILSFTYAFILSFINFDDISRYQKIIAESLTISLASLPLLIHFFAVFQPLSVLLTAIFSV AFDTIMLPMLSIVFILSPLVKLTCFNGCFVFLETVIKNTKAILGGPIVFGKPSLGILVLL FLTLGVLYDCWRRKKMAIFLVSLVGLLFFQIKHPLENEVTVVDIGQGDSIFVRDVKGHTL LIDVGGKVSFSEKNAWQERLTDSNAERTLIPYLNSRGVGKIDQLVLTHTDTDHMGDMLEV AKQVKIGEILVSQGSLTKPDFVAKLQAMKTKVHVVTAGDVLPIMGSHLQVLYPSQTGDGG NNDSVVLYGNLLGKNFLFTGDLEEEGEQELIATYPNLPVDVLKAGHHGSKGSSSSEFLAH ISPQIALISAGQNNRYKHPHQETLERFRAQNMTIYRTDEQGAIRFRGLNHWKIETVR >gi|304426803|gb|AEEM01000011.1| GENE 144 127267 - 128328 962 353 aa, chain + ## HITS:1 COG:SPy1407 KEGG:ns NR:ns ## COG: SPy1407 COG1466 # Protein_GI_number: 15675327 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Streptococcus pyogenes M1 GAS # 9 348 1 340 346 453 72.0 1e-127 MVFCYNIFMIAIEEIDKLRKENLSLITVVTGEDLGQFSQLKERMMARVGYDKDDLTYSYF DMAEVDYQDAEMDLESLPFFADQKVVIFDNLLDITTAKKSYLDDKALKRFEAYLENPLDT TRLIIFAPGKLDGKRRLVKILKRDAQIFEASELKEAELKTYFQKLAHKENLTFDSGVFEA LLLKSNYDFSEILKNIAFLKSYKKDGHITADDINQAIPKTLQDNIFDLTQFVLNGKIDEA RELIRDLRLQGEDEIKLIAIMLGQFRMFLQVSILASQGKNEQQTVTALSDYLGRRVNPYQ VKFALRDSRTLSMPFLKKALAVLIETDYAIKTGTYDKAYLFDIAILKIAHEHH >gi|304426803|gb|AEEM01000011.1| GENE 145 128417 - 129025 892 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 200 1 200 201 348 82 2e-94 MAIILPKLPYAYDALEPYIDTETMTIHHDKHHATYVANVNAALEKHPEIGEDLEALLADV DSIPADIRQAVINNGGGHLNHTLFWELLSPEKQEPTAQVLAAIEEDFGSFDEFKAAFTQA ATTRFGSGWAWLVVNENGKLEVLSTANQDTPISQGKAPILALDVWEHAYYLKYRNVRPDY IKAFFDVINWEKVAELYSKATK >gi|304426803|gb|AEEM01000011.1| GENE 146 129177 - 129902 1153 241 aa, chain + ## HITS:1 COG:BS_yrbC KEGG:ns NR:ns ## COG: BS_yrbC COG0217 # Protein_GI_number: 16079834 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 238 1 237 240 252 52.0 4e-67 MSGHNKWSKIKNKKGEADAKRGAIFNKLSREIFVAAKAGGGDPSMNASLRMVLDKARAAN MPKDNINRAIKKATDVGDTTNYDEITYEGYGPGGVAILVHTLTDNKKRTDANMHTIFTRN GGNMGSTGSVAYMFDRKGYIVIDRDNLDLDEDAMLEVILDAGAEDLKTSDDAFEIFTEPK EFPAVKEALQAQNLEFAQAQLSMIPQNYVSLDDEQADILETLVDKLEDDDDVQDVYTNMA E >gi|304426803|gb|AEEM01000011.1| GENE 147 129934 - 130962 1217 342 aa, chain - ## HITS:1 COG:SPy1400 KEGG:ns NR:ns ## COG: SPy1400 COG0809 # Protein_GI_number: 15675321 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Streptococcus pyogenes M1 GAS # 1 341 1 341 342 623 87.0 1e-178 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDELNPGDALVMNN TRVLPARLYGEKPDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGAKVSFGDGRLTATVV EELDHGGRIVEFAYDGIFLEVLESLGEMPLPPYIHEKLDDPDRYQTVYAKENGSAAAPTA GLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHEMHSEFYTLSEEAAQTLR DVKAAGRRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIKPGYEFKVVDAFSTNFHL PKSTLVMLVSAFAGREFVLDAYQHAIDERYRFFSFGDAMFVK >gi|304426803|gb|AEEM01000011.1| GENE 148 131138 - 131638 582 166 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0665 NR:ns ## KEGG: GALLO_0665 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 166 1 166 166 238 99.0 7e-62 MTIKDYAKSIVYGGMDGIVTTFAVVAGAVGGNLGIKPILILGFSNLLADGFSMAVGDYLS STTEESAVKAKAVKNAGATFMSFITFGLIPLLSYLLINVFSLFKIHTFLIACVLVSLALA LLGLVKAIITGSSKKKEIFRTLLIGLIAALFAYCVGEGLGKLAGTR >gi|304426803|gb|AEEM01000011.1| GENE 149 131767 - 132471 993 234 aa, chain + ## HITS:1 COG:SPy1399 KEGG:ns NR:ns ## COG: SPy1399 COG0363 # Protein_GI_number: 15675320 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Streptococcus pyogenes M1 GAS # 1 234 1 234 234 340 69.0 2e-93 MKVIRVNNQVEGGQVAFSLLKDEMAKGAKTLGLATGSTPLSFYEEIRKSNLDFSDMTSIN LDEYVGLAADNEQSYRHFMQENLFQYKPFKESFLPNGLAEDLQAETRRYDQVIAEHGIDF QILGIGRNGHIGFNEPGTPFDVTTHIVDLAKDTIEANSRFFASMDDVPKQAISMGIKSIM ASKMVVLMAYGEGKADAINQMINGPVTEELPASVLQNHPNVVVIVDEAAASKLN >gi|304426803|gb|AEEM01000011.1| GENE 150 132547 - 133263 660 238 aa, chain + ## HITS:1 COG:SP0680 KEGG:ns NR:ns ## COG: SP0680 COG1187 # Protein_GI_number: 15900581 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pneumoniae TIGR4 # 1 237 1 237 241 233 52.0 3e-61 MRLDKLLGQAGFGSRNQVKKLIRSRQVYVDGRLAEADNLNVEPSLQKITVSGKQVKQSSE KYFLLNKPAGVVSAVSDKEHQTVIDLIKEADRVPKLYPVGRLDRSTEGLLLVTNNGPLGY RMLHPKYHVAKTYYVEVNAFLADDAPAFFENGVSFDDGTICKPAKLEIITASPETSSAYV TISEGKFHQIKKMFLAYGVKVTYLKRLTFGEFQLGDLPSGQYRELTSTEKEILKNYLY >gi|304426803|gb|AEEM01000011.1| GENE 151 133317 - 134288 568 323 aa, chain + ## HITS:1 COG:SPy1395 KEGG:ns NR:ns ## COG: SPy1395 COG4469 # Protein_GI_number: 15675318 # Func_class: R General function prediction only # Function: Competence protein # Organism: Streptococcus pyogenes M1 GAS # 1 311 4 315 320 329 53.0 4e-90 MLSALDENGKLVSLLDAIPANQNFVCPACHSAVRLKNGKVMRPHFAHVSLDKCDFYSENE SSEHLQLKAALYHAVSRTEQVVVEKVLPDLHQVADLFVNDNLALEVQCSRLSEQRLFQRT KAYQSHGIQVLWLLGEKLWLGNRLSPLQRHFLYFSQNMGFHLWELDVTKQLIRLHYLIYE DLHGKIHYLTKTCSFSDDIMAFFRLPYRQQKLSTYEVNQDQTLLTYIQKQLSSRHSIWLK RQEEAYLQGKNLLSLPLSAYFPQVRPFDFAEGFCQISQDLSPFYENFHCFYQNQTEKERQ WLYPPAYYDKMVNKPQKGECDVR >gi|304426803|gb|AEEM01000011.1| GENE 152 134278 - 136080 1989 600 aa, chain + ## HITS:1 COG:SPy1393 KEGG:ns NR:ns ## COG: SPy1393 COG1164 # Protein_GI_number: 15675317 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Streptococcus pyogenes M1 GAS # 1 599 1 599 601 846 74.0 0 MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDSDLENAKAYKGHLTASSNDLLAITES YLALSRRLEKLYVYASMKNDQDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEA FEDFVAEIPALSAYAHFFEQLFKRQPHVLSQAEEELLAGAQEIFGAAGETFGLLDNADII FPIVLDDEGKEIQLTHGNFISLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMY DIHTPLSEMDMSFTYEEALAKAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYS GGSYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRENQPYVYGDYSIFLAEIASTTN ENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY LNQLYADLNEKYYGLSKADNPEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKVVHGT QADIDRYLDYLKAGNSDYPLNVIKKAGVDMTTSAYLDAAFRIFEERLDELEVLIEKGAHL >gi|304426803|gb|AEEM01000011.1| GENE 153 136154 - 136672 497 172 aa, chain + ## HITS:1 COG:L3279 KEGG:ns NR:ns ## COG: L3279 COG3981 # Protein_GI_number: 15673542 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Lactococcus lactis # 1 167 4 176 178 150 42.0 9e-37 MEIRKLDVNDEAAYRAYQTSLENDDNPFITTREIGDFKTFVENSRAQETQTTNPDYSTMT TYYAFLNGKIAARISCRWQLEKGNLATIGGHIGYQTSPEFRRQGIMTKLLSFALEQYAKR GINPVLITAREDNIASRRTIEKAGGILENIIDLEDGHRLARYWITLDLENSD >gi|304426803|gb|AEEM01000011.1| GENE 154 136694 - 137305 706 203 aa, chain + ## HITS:1 COG:L194765 KEGG:ns NR:ns ## COG: L194765 COG0546 # Protein_GI_number: 15673735 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Lactococcus lactis # 1 201 1 195 198 180 49.0 1e-45 MTTFIWDFDGTLVDSYEAIGQALQVTYAHYGLAFDEQWIMDFIIKESVKALLYQVAKEQE LDFAELSAFFKKEQEARDYLIKPMPHLTEVLAATKQKGVTHFVYTHKGITANDVLERLGV CQYFTEVVTSANGFARKPEPEAINYLLEKYDLDKTSTYYVGDRRLDVEAAENAGIKSINL GQPSSKINQHIADLSDIVALFND >gi|304426803|gb|AEEM01000011.1| GENE 155 137359 - 138060 672 233 aa, chain + ## HITS:1 COG:SPy1391 KEGG:ns NR:ns ## COG: SPy1391 COG4122 # Protein_GI_number: 15675315 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 233 1 233 235 378 81.0 1e-105 MVKSYSKTANHNMRRPVVKEDVVRYMRTHQKQNEGYLAELEAFAHQENIPIIQHEVVAYF RFLMQTLQPKNILEIGTAIGFSALLMAENAPDAKITTLDRNPEMIAFAKENFAKYDTRKQ ITLVEGDAVDTLSTLEGEFDFVFMDSAKSKYIVFLPEVLKHLKVGGVIVFDDVFQGGDIV KPIEEVRRGQRTIYRGLQRLFDATLDNPNLTATLLPLSDGLLMIRKNTADISL >gi|304426803|gb|AEEM01000011.1| GENE 156 138129 - 139235 1418 368 aa, chain + ## HITS:1 COG:SPy1390 KEGG:ns NR:ns ## COG: SPy1390 COG0760 # Protein_GI_number: 15675314 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Streptococcus pyogenes M1 GAS # 53 367 22 340 351 225 53.0 1e-58 MANKEKKGFKKAKTEKKPKDFSKVKKVVQSKAFKGVSIAVASALIGAGVTYLATNSNSET KALVTMKGDTITVSDFYNAAKSTSSSQQTMLNLILSRVFEDQYGDKVSDDDVSEAYNTTA SSYGSSFSSALSAAGLTSDTYKQQIRTSMLVEYAVKQAAKKKLTTKNYKAAYEDYNPDTT AIVIALSDEDTANSVHDQATADGADFETIAKDNTTADKTEYTFDSADTDLPEDVMNAAFD QDEGSVSDVIKVLDTSTYSYTYYIVKTTKKTEKDSDWKTYKKRLKKIILAQYESDTDFQN EVIAKALDKANVKIKDDSFASILSQYATSSSSSSSSSSSSSSSSSSSSDDSSSSSSTEES STTESSDE >gi|304426803|gb|AEEM01000011.1| GENE 157 139605 - 142223 3581 872 aa, chain + ## HITS:1 COG:SPy1389 KEGG:ns NR:ns ## COG: SPy1389 COG0013 # Protein_GI_number: 15675313 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 870 1 870 872 1508 85.0 0 MKQLTSAQVRQMWLDFWKSKGHSVEPSANLVPVNDPTLLWINSGVATLKKYFDGSVIPEN PRITNAQKAIRTNDIENVGKTARHHTMFEMLGNFSVGDYFRDEAITWGYELLTSPEWFDF PKDKLYMTYYPDDKDTYNRWISLGVEPSHLIPIEDNFWEIGAGPSGPDTEIFFDRGEDFD PDHVGIKLLAEDIENDRYIEIWNIVLSQFNADPAVPRSEYKELPHKNIDTGAGLERLVAV MQGAKTNFETDLFMPIIREIEKLSGKTYDPDGDNMSFKVIADHIRSLSFAIGDGALPGNE GRGYVLRRLLRRAVMHGRRLGINETFLYKLVPTVGKIMESYYPEILEKQDFIEKIVKREE ETFARTIDAGSSMLDELLADLKAAGKDTVEGKDIFKLYDTYGFPVELTEELAEDKGFKID HAGFEAAMKEQQERARANVVKGGSMGMQNETLSSITEESVFSYEDEVLDSTLSVIIADNK RTEAVSEGQALLVFAKTPFYAEMGGQVADHGMIKNDKGDIVARVTDVQKAPNGQALHTVD VLASLSVGTTYTLEIDSKRRHRVIKNHTATHLLHAALHNVIGEHATQAGSLNEEGFLRFD FTHFEAVTAEELRQIEEEVNQQIWNAIPVKTIETDIDTAKSMGAMALFGEKYGKNVRVVT IGDYSIELCGGTHVSNTAEIGIFKIVKEEGIGSGTRRILAVTSKEAFEAYRQEEEDLKTI AATLKVPQLKEVTNKVASLQEQLHKLQKENAELKEKAAAAQAGDVFKDVKEANGVRYIAS QVTVSDAGALRTFADNWKQKDYSDVLVLAAAIGEKVNVLVASKSKDVHAGNLIKALAPIV SGRGGGKPDMAMAGGSDAAKIADLLAAVAENL >gi|304426803|gb|AEEM01000011.1| GENE 158 142269 - 142457 253 62 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0675 NR:ns ## KEGG: GALLO_0675 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 62 1 62 62 79 100.0 3e-14 MKSKNTLLKLAIAFIGITLLILAYIIIVDALQGHVNWVTLLVALAEGSLLSSLIKMLQDS GK >gi|304426803|gb|AEEM01000011.1| GENE 159 142586 - 143566 509 326 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|171779582|ref|ZP_02920538.1| ## NR: gi|171779582|ref|ZP_02920538.1| hypothetical protein STRINF_01419 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 101 304 1 204 216 260 69.0 9e-68 MKKIYSPFCVTILGLVLLMVIFPLAQGKIILSYISIMLAVGLHELGHFVIGYVNGIKPLY LIIGFIKFNFENGFRIQINDNWVYYGGIYRYKVANYPEKSVLKSLVGGPLVSLLGSLVLF FQSDFFTVFGYCNLLLFIVTVIPINLVGLCNDGFKLYKLLTRDDLFLLYQRVSNQLLQIY DEQAFTEISKVCSVLENKRVPDYILNSFLLYLIYAWLLQGEIPKIREIYSELTQRVPSDN FNRNYYYSLLATLEVLLYKRMSSDLFTKINLKKLDRISQKRLQYLSCLYLENRKKISEKR VAFQESLSSYSEQNSILVQAEKRFLI >gi|304426803|gb|AEEM01000011.1| GENE 160 143718 - 144500 935 260 aa, chain + ## HITS:1 COG:lin0310 KEGG:ns NR:ns ## COG: lin0310 COG0388 # Protein_GI_number: 16799387 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Listeria innocua # 2 259 3 259 259 273 49.0 2e-73 MKVSLIQMAIREAEPEQNKKKVLELLEKAVHDAPDVIVLPEMWNTGYALKQLADIADING KETIRDLGNFAKKHHVNLVAGSVATAKENHFFNTTYVFNREGQVIADYDKVHLFGLMVED EYLQAGNKESVFELDDVKAASVICYDIRFPEWVRTLMSSGAKVLFVVAEWPKERVEQWEI LLRARAVENQAFVVAVNRVGDGISDHFSGHSLVIDPLGKIVLQVPDNQEGIFTAELDLTE VEKIRGCIPVFADRKPDLYH >gi|304426803|gb|AEEM01000011.1| GENE 161 144512 - 145690 1276 392 aa, chain + ## HITS:1 COG:lin0314 KEGG:ns NR:ns ## COG: lin0314 COG0436 # Protein_GI_number: 16799391 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Listeria innocua # 5 392 4 389 393 471 58.0 1e-132 MFSQSKILQELPEQFFASLVAKVNAEVAEGYDVINLGQGNPDQPTYDYIVDALVESAKNP ASHKYSQFRGNANFKAVASQFYKDNYHVNLDSEKEICVLGGAKIGLVEFPLATMNPHDLL LLPDPGYPDYLSSVSLGKINYETFPLKAENNFLPDLQAIPEEVAKRAKFIYVNYPNNPTG AVATVAFYEELVAWAKKYEIGVVSDFAYGALGADGYENPSFLSTPGAKDVGIELYTFSKT FNMAGWRLAFAAGNEQLIEALNLLQDHLFVSIFPAIQDAGAAALLDEKAKATIAGLNQKY DERRHAFVQAAEKIGWHAFESKGSFYAWMPVPEGYDSESFADLLLNEAHVAVAPGKGFGE QGDGYVRIGLLVEPDRLVEAVERISKLKLFEK >gi|304426803|gb|AEEM01000011.1| GENE 162 145891 - 146724 776 277 aa, chain + ## HITS:1 COG:BH3893 KEGG:ns NR:ns ## COG: BH3893 COG1131 # Protein_GI_number: 15616455 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 4 273 5 280 282 219 40.0 4e-57 MVRINVQNLSKSFKDTVALDEVSFCVNEGEIFGFLGPSGAGKTTTINILTNQLKQDSGEV EILGKKPEQLTPDDYLKMGIMSDTVGFYENMTVYKNLEFFARFHNLPMSKVDDLLKRLDL YEDRNKKAKKISTGMRQRLLLIRAILHDPEIIFLDEPTSGMDPTLSQKVHQLLLELKNKG ISIFLTTHNMQEATKLCDKLSLLNKGKILEYGSPEEIIEKYRVDDNVHLLYKNGEEKVIS RDEVANYLNPNVVSMHTAEPDLETIFIKLTGEKWHGE >gi|304426803|gb|AEEM01000011.1| GENE 163 146714 - 147406 582 230 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0679 NR:ns ## KEGG: GALLO_0679 # Name: not_defined # Def: putative ABC transporter, permease protein # Organism: S.gallolyticus # Pathway: not_defined # 1 230 1 230 230 351 99.0 1e-95 MGNRFMSLLWLRWQFILSNKLFLFTVFSPILYMAIFAALGNPEINASLIGTGINLVYSYT AGTFASTMISEEKEKKNLKALILSGVRQGEYILSVVVFPLLFSLISSILIPIIMQIQDMD WGKFLAVVSLTNLIFVLLNLLIAFLAKNQTQTTVCSLTLVIIASFLPLFSEFIKSVNKFM NYSFIGANAKYFKELSSYQLTDQTMVVLLIWIFLTSIALYFAYKKNRKID >gi|304426803|gb|AEEM01000011.1| GENE 164 147544 - 148566 1159 340 aa, chain + ## HITS:1 COG:L0104 KEGG:ns NR:ns ## COG: L0104 COG0002 # Protein_GI_number: 15672779 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Lactococcus lactis # 2 338 3 339 340 347 53.0 3e-95 MKVSIVGITGYSGLELVKLLNNHKNVMIASIHATKEIGRRLSELYPYLVGVCDLVIEAFN AQEIMAKSDLVFFATPSGVASQLAQPFVEVDFPVIDLSGDHRLPADSYEKWYKKTPASDD VLNKFTYALAEFTDVKGKKFISNPGCYATATELALIPLLKAGVAEEDSIIVDAKSGLTGA GKALSESSHFVNVHDNYVTYKLNRHQHIPEIVQELQLFSKKLHHIQFSTSLLPVNRGIMA TSYVKLKKPLSEAELYAIYKDAYKDKPFVRIQDDLPELHNVIGSNFTDIGFLYNDVTNVL TVVSVIDNLIKGAAGQAVQNLNLMNGWNETEGLLISPNYL >gi|304426803|gb|AEEM01000011.1| GENE 165 148637 - 149830 1540 397 aa, chain + ## HITS:1 COG:lin1632 KEGG:ns NR:ns ## COG: lin1632 COG1364 # Protein_GI_number: 16800700 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Listeria innocua # 1 397 1 398 398 423 57.0 1e-118 MKVIEGNVASPLGFSADGLHAGFKKRKLDFGWIVSEVPASVAGVYTTNKVIAAPLIVTRN SIKKAQKMKAIVVNSGVANSCTGVQGMEDAYTMQKWTAEKLGVEPDLVGIASTGVIGDLL PMDTLKTGLSKLVVNGNSDDFSKAILTTDTMVKTVAVTEKFGRDEVIMAGVAKGSGMIHP NMATMLAFITCDANISSETLQLALSQNVETTFNQITVDGDTSTNDMVLVLSNGCTLNEEI LPDTPEFDKFSAMLNYVMQELAKKIAKDGEGASKLIEVNVKNAPNALDARMMAKSVVGSS LVKTAIFGEDPNWGRILAAVGYAGVDVPVDNIDIYLGDIPVMLKSSPVDFEAEEMQDIMH EDEITITVDLHSGEAVGKAWGCDLSYDYVKINALYRT >gi|304426803|gb|AEEM01000011.1| GENE 166 149844 - 150578 819 244 aa, chain + ## HITS:1 COG:lin1631 KEGG:ns NR:ns ## COG: lin1631 COG0548 # Protein_GI_number: 16800699 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Listeria innocua # 1 236 1 236 250 154 38.0 1e-37 MENIIVIKIGGVASQHLSQDFINQIKKWKEAGKQLVIVHGGGFAINKLMEEEHVPVKKIN GLRVTSQSDMKLVSYALLNIVGENLVKKLNQSSIDSIQLLSDIEKVVQADFLDQETYGYV GNVSQIQTEILEKMLANQMLPVLASIGYSKDGDMLNINADYLATAVAVALGAEKLVLMTD VKGVLENGAVLDSLSSTEFQDKIDQGIITGGMIPKIESAVNTVLAGVGEVLIGDNLVTGT SIIC >gi|304426803|gb|AEEM01000011.1| GENE 167 150604 - 151734 1319 376 aa, chain + ## HITS:1 COG:lin1630 KEGG:ns NR:ns ## COG: lin1630 COG4992 # Protein_GI_number: 16800698 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Listeria innocua # 1 375 1 376 384 376 51.0 1e-104 MTKLFQNYKRAAVEFVKAEGNYLFDQDGKKYLDFSTGIGVTNLGFHPEVKAALQKQSEEI WHTPNLYLNSLQEEVAGKLIGDKDYLAFFANSGAEANEAAIKIARKATGKQEIITFVNSF HGRTFGSMSATGQDQIKDGFGDVVPHFSYAIYNDLDSVKSLVTDDTAAIMLELVQGESGV RPADKDFVTALSAFCQETGILLIVDEVQTGMGRTGKLFSFEHYGIEPDIFTLAKGLGNGV PVGAMLAKEKIGFAFSYGSHGSTFGGNKLVMSAASSVLDIMLADGFLLQAFDNGNYLQAE LKKVLTGNAKVTDVRGLGYMIGIETTENLAELVEKARDKGLIVLTAGTNVIRLLPPLTLT KEEIDQGVAILAEVFA >gi|304426803|gb|AEEM01000011.1| GENE 168 151833 - 152390 718 185 aa, chain + ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 5 151 2 146 176 122 43.0 4e-28 MSKNILIVAGHPDLKNDSLANKTILEEVKKALPEVELDILSDLYPDYQIDVAAEQDKLRK ADVIIFQYPLYWYMTPSLLNKWIEKVFVHGFSHGSTGDALKGKHLVASLTTGAGEAAYSS ESGTTIDDLLAPIRLTAKLTQLNYAGHIVTHGVSYSLREDANKAQEMVAKSQEHAQKLVA LVNGL >gi|304426803|gb|AEEM01000011.1| GENE 169 152527 - 153408 1102 293 aa, chain + ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 285 1 287 291 200 35.0 3e-51 MDIRVLNYFLVVAEEGNITKAAERLLMTQPTLSRQLKALEEELEVALFKRSNHRIYLTEE GLLFQQRARDIVEMTEHAKAELHATEEIKGTLSIGCGELAAMQELSQALAIFQEKHPQVK VALHSGDNDDIRQGIDMGQLDFGLLLEPVDVSLYDFVHLRTKERWGILAHKESDFADKKV IVPGELSGTPVLTILDRTVQRELIAWSGAAAATMVNRGRYNTAYNAVMLARESKGVVIGL DLKQSYPDFTFVPFEPELALSSVLAWRSSRQQSTLVKAFITFFREYENTEQDL >gi|304426803|gb|AEEM01000011.1| GENE 170 153590 - 154150 750 186 aa, chain + ## HITS:1 COG:RSc3097 KEGG:ns NR:ns ## COG: RSc3097 COG2249 # Protein_GI_number: 17547816 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Ralstonia solanacearum # 3 146 5 146 182 118 44.0 6e-27 MAKTLVIAGHPYLTDDSVANVEILKGLEAGLDDVEVVRLIEEYPDFQIDIPKEQERLLAA DTIVLQFPYFWYAMPSLLQRWMEEVFQFGFSHGTDDTKLVGKKLLVSLTTGAPKEMYAKD GFVGHEIEEFLAPIKVTAKMCGMNYLGHVETAGVSYTARTDETAIANMKKRAQRHAKDVI ELVNAN >gi|304426803|gb|AEEM01000011.1| GENE 171 154168 - 154461 558 97 aa, chain + ## HITS:1 COG:no KEGG:ECA1484 NR:ns ## KEGG: ECA1484 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 84 1 83 92 72 36.0 5e-12 MFTMDVVIKNHLIPDDKRDELFEKHAQWVQENYDSGAFLLMGPYTTKEMTGLIIGQADSK VAIEAIAQADAFYPDYADYVINEFNINKINPKIAEIK >gi|304426803|gb|AEEM01000011.1| GENE 172 154486 - 155340 1123 284 aa, chain + ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 4 260 6 265 286 285 53.0 9e-77 MEYVTLNNGVKMPKIGLGVMQMTDPVASENAIVTALEMGYPMIDTAAAYGNEAIVGRAIK RANVNREDIFVTSKLWVSDMSYEGAKRGLEKSLENLQLDYIDLYVLHQPIGDLYGAWRYL TEAYKEGKIRAIGVDNFTLAKLVEFIKFNDVKPAVNLIQANPYHQRQDDLQAMVKRDVQM IAWQPFAGGDGNLFEDAVLKAIADKYHKTVGQVILRWLIQRDIVVIPKSSSPERQAENLA IFDFSLSQEDMETIKKLDQGGGFALPENADQFERLLNMWEQFFG >gi|304426803|gb|AEEM01000011.1| GENE 173 155632 - 156741 1498 369 aa, chain + ## HITS:1 COG:BS_yqiG KEGG:ns NR:ns ## COG: BS_yqiG COG1902 # Protein_GI_number: 16079477 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Bacillus subtilis # 5 332 8 339 372 253 42.0 4e-67 MTYTFLEPYTFKNGVTAKNRIVIPPMTEGSALYDGTVSQDELNFFAKRAGDAGIFISPVA YVTENGKGFAGQLSITDDKYLSRLSEMAQAMKKGGSLAILQIFHAGRRAFVAPEKLEGAS AIASGIPGSPTPRELTGEEVEDIIKAFGEATRRAIQAGFDGVEIHGANHYLIHQFFSAKS NQRTDKWGQERSRFGLAIIGACRKAIKEAGASQFLLGYRFSPQEKGDKGFHLKDTLAFIN QLADAEIDYLHLSQDDVWDVPNDEPAGSDNVVKQVLATINQRKPLIIVGGISTPQEAQEA KETGAEFVALGMQYLREPQWVAKVEAGQEDRIRYTMPDEAAAREVGINPFMYRYMQEDLG KPITQAPKQ >gi|304426803|gb|AEEM01000011.1| GENE 174 156759 - 157436 1048 225 aa, chain + ## HITS:1 COG:PA2719 KEGG:ns NR:ns ## COG: PA2719 COG0693 # Protein_GI_number: 15597915 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 1 224 1 227 228 195 45.0 7e-50 MTKAVIVLTNVEKYDPLDRATGLWLSELTHFYDVLVENGVETDFVSPNGGYIPLDPPSLL SMDATDWKYYTDSEFRKNALANTHKPSELNAKDYDFIYYAGGHGTVWDFPKSEEIAELAR QIYDNGGIISAVCHGVAGLLALKDDKGTSFVAGKQLTGFSNAEEEANGTTKEVPFLAEDA LKAAGALYQSSTPFSDFVVADGRLITGQNPQSVRSLAQKVLETLD >gi|304426803|gb|AEEM01000011.1| GENE 175 157568 - 158047 635 159 aa, chain + ## HITS:1 COG:L0247 KEGG:ns NR:ns ## COG: L0247 COG0789 # Protein_GI_number: 15673461 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 135 1 135 144 151 53.0 6e-37 MQTYTIGEVSEMLGITIDTIRYYDKEGLLPFVKRDKGGRRVFTHDNIQLMRMIMDLKHAG VPVKEIAHFVSWRLDGDDSLGERYDFLDKHEKILEQKIADLEQSLAYLRFKKWYYKTAIE AGTEKIHIDGATNHVCTATYDEYQALLDSGQSAIDLGNF >gi|304426803|gb|AEEM01000011.1| GENE 176 158137 - 159060 812 307 aa, chain + ## HITS:1 COG:Cgl1047 KEGG:ns NR:ns ## COG: Cgl1047 COG3238 # Protein_GI_number: 19552297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 2 306 1 307 307 206 43.0 7e-53 MILLSLIPIVTGGLLATQTALNSRLRSFVGSPFLASTVSFSVGALFLLALAFFTQGSIHF TTATFSDNPWWIWTGGLLGSIVLTVNILLFPKLGGVQTAVLPIFGQIIMGLLIDQFGLLS SPLNPLTVPRLLGFVLVLIGVLLTVIRKQSSRENKQKSVLLWQMIGVLAGMLSATQTAVN GYLGTILGSSLQAAAISFSTGTIILLVYCLGTQTTFADLGKAVSAGKSYWWIWIGGFLGG LYVFGSAWLVPQIGTGQVVVMALFGQLTFSAIIDQFGFFHALKSPVSRQKLLGLVIMFIG VILTKMA >gi|304426803|gb|AEEM01000011.1| GENE 177 159275 - 159640 320 121 aa, chain + ## HITS:1 COG:SP2119 KEGG:ns NR:ns ## COG: SP2119 COG1476 # Protein_GI_number: 15901934 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 50 117 3 70 71 95 79.0 2e-20 MSDKNWLLVFLAIFSAYLTSEAPNPRRKELLKKQFLRRKQLLLVTRTEDNLVLKNRLKEL RARDGLNQTQLAKLAKVSRQTISLLERNEYTPSVIIALRIAHIFNEPVENVFSLDEEGEK G >gi|304426803|gb|AEEM01000011.1| GENE 178 159637 - 160404 688 255 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0691 NR:ns ## KEGG: GALLO_0691 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: S.gallolyticus # Pathway: not_defined # 1 255 1 255 255 426 98.0 1e-118 MKETRRWTTKQRILIYLGIAMVGLLVGVLAGYLSIDFNENILTFKFATFMILAYGLTAIS IVVTLWFMYQANHYHDRYESLGNDTDEDDSYEVYRKTFKNLEFARIFYNVSMALILFSLF GALYDFQDKILSNESLSLGTYVMDIIFLALLFIFQAAIFKLTQKIRHYKLSAFPTIKEVK EFAYSYDEGELQANYEQAFLIVFNLNQFLPIAYVVLYILAIVSSIDVTSGLVVTTAIYLY INLANIRFVNKYFRK >gi|304426803|gb|AEEM01000011.1| GENE 179 160925 - 161980 1091 351 aa, chain + ## HITS:1 COG:L0163_1 KEGG:ns NR:ns ## COG: L0163_1 COG0117 # Protein_GI_number: 15672975 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Lactococcus lactis # 3 142 5 142 142 149 54.0 7e-36 MHENYMAQAIAEAKKGFRQTYTNPLVGAVIVKNGRVIARGAHLQYGHEHAEKNAILYCEA PEELANSTLYVTLEPCHHTGKQPPCTQAIVEAGIKKVVVGQLDPNPLVAGKGLEFLKSQG IEVVTQVLENEARALNPHYNFYHEHKRPYVVLKQAVSLDGKIAVLGKRTALTDDETNRFV HDERDDYQAILVGADTVLIDNPQLFGAGTSLYPPVRVILDETGRIFGKRELQIFKNQSAP VYIFSRRQVANLPAHITVIALSNFSIANILQALYEKKIQSVYVEGGAQVHDAFLASDLWD ELISYVTPKVIGGNGRAAIASSRQVEQVYDLQDFSVQTIGTNLRLSVKRRL >gi|304426803|gb|AEEM01000011.1| GENE 180 161980 - 162582 485 200 aa, chain + ## HITS:1 COG:L0164 KEGG:ns NR:ns ## COG: L0164 COG0307 # Protein_GI_number: 15672976 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Lactococcus lactis # 1 191 1 190 216 169 47.0 5e-42 MFTGLIQEQGRISRIVKQQHSIKLTCKASRQLLADYKVGDSMAINGVCLTCVAKAGDTFT VDIMPETFKRTIFSECRIGDLVNLELAMAANARFEGHLVIGHVDSVATLIQKHSDENAIV LSFAISQELAGQIVGQGSIAVNGVSLTVVSVTSGQFSVSLIPHTAKETNLARLKKGDKVN IETDILAKYMQAQVAKMGGQ >gi|304426803|gb|AEEM01000011.1| GENE 181 162583 - 163761 1047 392 aa, chain + ## HITS:1 COG:BS_ribA_1 KEGG:ns NR:ns ## COG: BS_ribA_1 COG0108 # Protein_GI_number: 16079383 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Bacillus subtilis # 1 196 1 196 200 226 56.0 8e-59 MFKDVEKALADLKAGKLIVVVDDDDREAEGDLVGLAELASADNVNFMTKHARGLICAPVS KSIAERLELVPMSEENTDAHGTAFTISVDHKETSTGISAFDRAKTIQTLAAKASKASDFH RPGHMFPLVGRSGGVLQRRGHTEASLDLARLAGSTEAAYICEILKDDGTMARKADLHEFA QKWHLTMIEVGDIARYVSFQDSPKVKLPSAYGDFELRLFEDEKKREHLLLSKGDLTSDEP LLVRLHSECLTGDVFGSLRCDCGEQLHAAMKKIDEAGRGAILYLRQEGRGIGLKNKLKAY QLQEKGFDTYDANLELGFAPDERDYQIATDILSFLNIKQIKLLTNNPDKLEQLEKSGIEI VERLPLQISAHVENRAYLQTKQEKFHHLLHIV >gi|304426803|gb|AEEM01000011.1| GENE 182 163773 - 164234 706 153 aa, chain + ## HITS:1 COG:SP0175 KEGG:ns NR:ns ## COG: SP0175 COG0054 # Protein_GI_number: 15900112 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Streptococcus pneumoniae TIGR4 # 1 153 1 153 155 205 65.0 3e-53 MTTFEGKFIGKDVKIAIVVARFNEFITSKLLGGAMDGLIRNEVAKEAIDVYWVPGAFEIP FMTKKIVASGKYDGVITLGSVIRGSTSHYDLVCNEVAKGIGQINLTSDIPVMFGVITTED IEQAIERSGSKAGNKGSECAQGVLEMINLAKQL >gi|304426803|gb|AEEM01000011.1| GENE 183 164560 - 165093 775 177 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0696 NR:ns ## KEGG: GALLO_0696 # Name: not_defined # Def: putative serine rich lipoprotein # Organism: S.gallolyticus # Pathway: not_defined # 1 177 1 168 168 194 92.0 2e-48 MKKTVTYLTLAATSVLFLTACSNNNQESTNTSSSSSVSTSSSSSSSTSSSSETTGGGFVT YSDGSQITVGDGGAFEVTLSDGTLITYNTDGSYVIIESDGSNISKASDGSYAIVLASGTN IAYQSSGTYVITEATGNIETGNNSDTLDDYLEENDYPTLSEYDEQVQDIVDYVNENS >gi|304426803|gb|AEEM01000011.1| GENE 184 165369 - 166229 1097 286 aa, chain - ## HITS:1 COG:CAC0745 KEGG:ns NR:ns ## COG: CAC0745 COG0583 # Protein_GI_number: 15894032 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 7 99 6 99 293 65 35.0 1e-10 MIDDYLLEALVAFAKYGTLSATAEHLMVTQPTVTRGMQKLEDELGVTLFKRTPNRISLTE TGQLAAKEAEKLLEAKQAFIEHIQDFEKHSGKIRLGSVAPGPLYIAEDVASEHISIDNDL LSENEVIAKLLSQDYQLIFTHQEIQTDDIESLYVGTESLRVNSDAMVVPANKTEITFQEM AGFSFVVLRDIGIWQQIIEDNIPNAKFIYQDEVDDFNEIRRYSSLPYFTTNITQLTRERQ VHNRRLEMPITDETAQIDFYLAYLKTNKSQFKEEIAAIQTAWANLK >gi|304426803|gb|AEEM01000011.1| GENE 185 166414 - 167274 1223 286 aa, chain + ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 3 276 16 290 297 264 47.0 1e-70 MTETIILNDGNRIPAVGFGVFQIPADGSTYTAVKEALEVGYRHIDTAQAYFNEKEVGQAI KDSGIPRDEIFVTSKLWIQDYAYETAKATIDVTLEKMGLDYLDLYLLHQPYGKVEEAWKA LEEAKAAGKIKSIGVSNFTPNFWNQFVPHFNTIPAVNQVEFNPYFQQKALRDLLAKDDVK IEAWAPLGQGNKDLFAEPIITALANKYGKDAGQIILRFEVQEGIIVLPKSTKKVRMASNK ELFDFELTAEEMAELRALDKGKGAHDPDAPGVGDWLLSNYDVHAND >gi|304426803|gb|AEEM01000011.1| GENE 186 167429 - 168292 917 287 aa, chain + ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 6 281 17 292 297 333 57.0 3e-91 MIQQPTITLNNGVKMPMVGFGVFQIPAPDVCQKAVEEAIKTGYRLIDTAEAYGNEEAVGK AIKASGVPREELFITTKAFIQHINYEGAKEAFEESLRRLDTDYIDLYLLHQPVGDTFGAW RALEELYKDGKIRAIGVSNFEDDQLANLAIFNDVIPAVNQIELHVFNQKDDSVAYQASKG VQVESWGAFAEGRFDVFNNPVLKAIADKYGKTTAQVMLRWQLQRGIVSLSKSAKPERVRQ NFDIFDFELSDDDMAQIKTLNTNTTVFADHHEAATFELLAGFVGKSF >gi|304426803|gb|AEEM01000011.1| GENE 187 168557 - 169471 791 304 aa, chain + ## HITS:1 COG:L13157 KEGG:ns NR:ns ## COG: L13157 COG0598 # Protein_GI_number: 15672967 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Lactococcus lactis # 11 303 9 300 301 300 55.0 2e-81 MAITKEMLGDRLTWVAIDSDKISQTSNLYAEYGIDEELISYALDRNERAHMEYDWQTETM IIIYNVLNRTKEDNHYETIPITFVVRGDQLITIFNSDNAYIVDLMRHYLQRRPDVSIYKF LFMSLFLIAEAYFPYLEEMDKSTSQLNRRLRQRTTKKDLLGLSDIETGMVYLVSASNQNV ILLEQLKGQAFYKQLNNIEKEQLEDSLIEARQLSSMTQVNAQVLQQLSGSYNNILNNNLN DNMTTLTIISVVLAVFAVITGFFGMNVPLPWINDKHAWVTIIVICIVLWLLIVALLRYMI YRKS >gi|304426803|gb|AEEM01000011.1| GENE 188 169490 - 170056 541 188 aa, chain + ## HITS:1 COG:mlr1523 KEGG:ns NR:ns ## COG: mlr1523 COG3548 # Protein_GI_number: 13471525 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mesorhizobium loti # 4 163 56 215 246 87 34.0 1e-17 MSEMSKERLVAFTDAVLAIIMTILVLELERPSELTWSALWELKTNFFAYTISFFWLGTMW VNMHRAWDNVEKVNNRLVWISMLLLFFSSFFPYTTSLVASDFNSSVAQIVYGAIVMLVSF TNVWMYSELTNVATTNEAEAAARSHNNWMRWDIAIKVIGMLLSMTVFPQAMMWAVLFTAV VIVVPRSI >gi|304426803|gb|AEEM01000011.1| GENE 189 170086 - 170652 692 188 aa, chain - ## HITS:1 COG:SPy0600 KEGG:ns NR:ns ## COG: SPy0600 COG3859 # Protein_GI_number: 15674683 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 3 184 2 183 187 197 62.0 1e-50 MSSKNSQLSALIETALVAALAMALSYIPDFASWFTPSFGAIPLVLFALRRGTKYGVLAGL IWGLLHFILGKVWYLALSQVLIEYIVAFVSMGLAGIFTVPFQNALAKDNKGRALFYATGG AILAVFVRYFWHFVAGFIFWGSYAPKGMSPYWYSFTVNGTAGLLTLIFVILALAIIIPTQ GKLFLVKR >gi|304426803|gb|AEEM01000011.1| GENE 190 170920 - 171882 1165 320 aa, chain - ## HITS:1 COG:SPy1378 KEGG:ns NR:ns ## COG: SPy1378 COG0208 # Protein_GI_number: 15675308 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 4 320 3 319 319 570 93.0 1e-162 MSQTYYEAINWNEIEDIIDKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSAEEKDLVGKVF GGLTLLDTMQSESGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEA IFEWTNSNDYLQKKAKIINDIYENGDALQKKVASTFLETFLFYSGFFTPLYYLGNNKLAN VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSL YDGVGWTDEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVG NGYLLGSVEAMQDDDYNYGL >gi|304426803|gb|AEEM01000011.1| GENE 191 172330 - 174489 1881 719 aa, chain - ## HITS:1 COG:SPy1375 KEGG:ns NR:ns ## COG: SPy1375 COG0209 # Protein_GI_number: 15675307 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 719 1 719 719 1260 84.0 0 MSLKNLGDVSYFRLNNEINRPVNGQIPLNKDKEALRAFFRENVIPNSMAFDTIIDKINYL IDNDYIEPEFISKYTPDFIESLAKDLQAQGFRFKSFMAAYKFYQQYALKTNDGKYYLESI EDRILFNALYFADGNEELARDLATEMIHQRYQPATPSFLNAGRSRRGEFVSCFLISVTDD MNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGYEGAASGVVPVMKLFEDSFSYSN QLGQRQGAGAVYLDVFHPDIMAFLSTKKENADEKIRVKTLSLGITVPDKFYELARNNEEM YLFSPYSVEREYGVPYSYVDITAEYDKMVANPNIVKTKIRARDLETEISKLQQESGYPYV VNIDTANRTNPIDGKIIMSNLCSEVLQVQTPSVINDAQEFVKMGTDISCNLGSTNVVNMM TSPDFGRSIKAMTRALTFVSDTSSIEAVPTIKHGNEQAHTFGLGAMGLHTFLAQHHIHYG SPESIEFTNIYFMLMNYWTLVESNHISRERQQTFVGFENSKYADGSYFDKYITGEFIPKS DRVKELFAEHFIPSGEDWAKLRDAVMTDGLYHQNRLAVAPNGSISYINDVSASLHPITQR IEERQEKKIGKIYYPAAGLSTDTIPYYTSAYDMDMRKVIDVYAAATEHVDQGLSLTLFLR SDIPQGLYEWKTQSKQTTRDLSILRHYAFNKDIKSIYYIRTFTDDGDEVGSNQCESCVI >gi|304426803|gb|AEEM01000011.1| GENE 192 174555 - 174782 344 75 aa, chain - ## HITS:1 COG:SPy1374 KEGG:ns NR:ns ## COG: SPy1374 COG0695 # Protein_GI_number: 15675306 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Streptococcus pyogenes M1 GAS # 5 75 2 72 72 109 67.0 1e-24 MANKITIFSKNNCMQCKMTKKLLDKEGADYQEINIDERPDMIDYVKDLGFSAAPVVKAGD IIFSGFQPAKLKEII >gi|304426803|gb|AEEM01000011.1| GENE 193 175070 - 177733 3077 887 aa, chain + ## HITS:1 COG:lin1682 KEGG:ns NR:ns ## COG: lin1682 COG1048 # Protein_GI_number: 16800750 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Listeria innocua # 6 885 10 900 900 1111 61.0 0 MTEFLSKFSFKDGEYSYFNLEEAVSHYGGDIKKIPYTIRILLESLLRKYDGVDVTKNHIE NLATYNPKKTSGEVPFKPSRVILQDFTGVPVVVDLASMRDAIVANGGDAELINPEIPVDL VIDHSVQVDFFGCDTALEDNINLEFKRNNERYEFLKWAEKSFDNYRAVPPATGIIHQVNI EFLSDVVIEKNGMLYPDSMFGTDSHTTMINGIGVLGWGVGGIEAEAAMLGEASFFPVPEV IGVRLTGKLPKIATATDLALKVTQVLRQEKVVGKFVEYFGDGLSNLSLAERATIANMAPE YGATCGYFPIDDETLNYMRLTNRKEDHIALTKEYVKHNNLFYDPEHQAEYTKVVEIDLST ISPSISGPKRPQDLIDLTQAKQTFQESLVREVGVQGFGLTADEINKKATVHFDDQDIEIQ TGHVAIAAITSCTNTSNPYVLMSAGLLAKNAVERGLRVAPTVKTSLAPGSKVVTGYLRNS GLQTYLDTLGFNIVGYGCTTCIGNSGSLRPEVAEAITETDLLASAVLSGNRNFEGRVNPL VKANFLASPPLVVAYALAGNTNIDLTTEPLGFDQNNAPVYLKDIMPTNDEVAEYVDKYVT RELFEQEYEHVFTDSEKWNQIPTEESKIYHWNESSTYIQNPPYFDNLGDDLAIKPLKNLK PLAKFGDSVTTDHISPAGNIAKNSPAAKYLDNHGVDYVDFNSYGSRRGNHEVMMRGTFAN IRIQNQLADGKIGGYTKYNGEIMPIYDAAMHYKEDNVDTLVIAGKDYGMGSSRDWAAKGS NLLGVKAVLAESFERIHRSNLVMMGVLPLQFLEGDTAESLGLTGLETYDINLSENPGIHD VVDVVARDDSGEKHFKAMVRFDADADIRYYKNGGILPMVVRKKLEEA >gi|304426803|gb|AEEM01000011.1| GENE 194 177737 - 178855 1534 372 aa, chain + ## HITS:1 COG:lin1602 KEGG:ns NR:ns ## COG: lin1602 COG0372 # Protein_GI_number: 16800670 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Listeria innocua # 1 372 1 372 373 461 58.0 1e-130 MTGGSGLKDLIACNTHISSIIDDNLSYAGYNISELMDNDASFEEVIYLLWNLHLPNKAEF DSFVKELRENYAISDAVEQCIMIQSRSHLHPMSVLRSTVSLLGVYNVNAEDNSEEATYEQ SIQLMAKMPTIIATFARLRDGKTPVAPREDLGFAANFLYMLNGEEPTPLQVKALNRALVL HADHELNASTFAARVCASTLADIYSCVTTAIGTLKGPLHGGANERVFDMLTEIREMGDTK AYLKEKLDSQEKIMGFGHRVYKTQDPREKYLREMAQALTEGTENEVWFNLSREIEDYMKH TKGLIPNVDFYSATVYHVLGIDSSIFTLIFAMSRVSGWIAHIQEQQKNNKLIRPRSHYTG ELGLKYTPLEER >gi|304426803|gb|AEEM01000011.1| GENE 195 178884 - 180059 1549 391 aa, chain + ## HITS:1 COG:lin1601 KEGG:ns NR:ns ## COG: lin1601 COG0538 # Protein_GI_number: 16800669 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Listeria innocua # 1 391 1 420 420 514 62.0 1e-145 MADKIILENGHLTVSNNPIIPFIEGDGVGRDIWKNARAVFDAAIDKAYQGQKKVEWLELL AGKKAHEATGEWLPEATLETIKEDLVAIKGPLETPVGGGIRSLNVALRQELDLYACVRPV RYFKGIESPLKEPEKTSITIFRENTEDIYAGIEWNAGTEEVKKVIDFLQNEMSVSKIRFP ETSSIGIKPISQEGSERLIRSAIEYALANNLTKVTLVHKGNIQKFTEGGFRSWGYDLAKR EYADELASGKLVINDIIADNFLQQILLNPEKFDVVALTNLNGDYASDALAAQVGGIGISP GANINYLTGHAIFEATHGTAPDIAGKDIANPCSVLLSGCMLFDYIGWTEVASLITAAIEK TFAQGQFTADLAQGKVACSTSEFAAKLIENL >gi|304426803|gb|AEEM01000011.1| GENE 196 180139 - 180942 698 267 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 9 261 7 269 270 175 37.0 9e-44 MTYSLADIVFLFFIYSFVGWLWETVYCSIKDKKFAYRGFLVGPYCPVYGFAVTTVLLATE PFQSNILWLFLSGLLVATAFEYVAGWLLETVFHMKLWDYSQEFGNIQGRIAPRISLFWGF GIVVLVEFIQPGVMWLINHLNDWVALGIVVVMTADLIWTVVDTVKFQQAAIAFEKYVRAE QEKLRESVRTEVGDLTQQAEVFSKRLENLRLHINETLREKGIEPFRFNQRRMLRNYKNFR LTTAPFLNEIRKQTAALKEKRNEKNNH >gi|304426803|gb|AEEM01000011.1| GENE 197 181232 - 182041 722 269 aa, chain + ## HITS:1 COG:L41779 KEGG:ns NR:ns ## COG: L41779 COG0561 # Protein_GI_number: 15672226 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 2 268 4 267 270 196 39.0 4e-50 MIKRIFSDMDGTLLDNTGAVSEENVSLIKSAGIPMTLVSARAPMEMMAAIEKLDLTGAQV GFNGGLIYRVDNGRVLPIHSQPIAKKDVHTLLGAIHEKFPEVSLSYYDLHKWYCHEIDKG ILFEQKLTQQKPTRTMLLSHFLKPKKEIYKLMMIVFDEKTLTNLQEFVLSLGIDTVAVQQ SGKHYLEITHTAAKKSAGIDYIMQKEALSEGETAAFGDGHNDLPMFERTSFPIAMANASP DVIAQAKFITLVNQCNGVGYGIHKFLRNV >gi|304426803|gb|AEEM01000011.1| GENE 198 182042 - 182965 878 307 aa, chain + ## HITS:1 COG:lin2880 KEGG:ns NR:ns ## COG: lin2880 COG1609 # Protein_GI_number: 16801940 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 307 1 315 318 189 36.0 7e-48 MVTIRDIAERTGYSKATVSRVLNNHPYVSDDVRQKIQAVIKELNYTPNLVAKELSAGKTN KIAVVIPHNRHPYFTQLLNGMLDESKKTNHNLLLLHSGYNELSEREYLEQLRGRAFDGLI FTSRELPIETIASYAQYGPILLCEPLDNPLLKSVYVDRYQAYNDLNAYLIETGIKSPAYL FTRADEASATYRTMVSVLEHFPQYQNSAVFSGISNFQDGYNWAKQLTQDFDAIVTNEDQM AYGVIKAFKDNGRALPLIIGQENQHISELLGIPSVEHYSYELGKLAVRQILADENNPLAI PSKFIRR >gi|304426803|gb|AEEM01000011.1| GENE 199 183004 - 183798 709 264 aa, chain + ## HITS:1 COG:ECs2020 KEGG:ns NR:ns ## COG: ECs2020 COG1434 # Protein_GI_number: 15831274 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 38 246 36 251 266 129 33.0 6e-30 MENQKIAENLNILGQFCGKRDVEELNQKNLHEKYGIEKADVMVLFGGSILAGGDVLAKAI KDDIAEHYIIVGGEGHTTATLREQIHKEYPLIAVNGLTEAELFQQYLLTVYQIQADYLET KSTNCGNNITNLLKLMKNKGIAHHSIILCQDATMQYRMEATLRKYLSKDTVVINYAAYRA YLNYQDKLTYATKIHGMWDVDRYINLLMGEIPRLTDNEQGYGPNGKNFLAHVDIPNRVVA AFEALKPIYGNHIRKANPKYSSVL >gi|304426803|gb|AEEM01000011.1| GENE 200 183870 - 184250 620 126 aa, chain + ## HITS:1 COG:SP1567 KEGG:ns NR:ns ## COG: SP1567 COG0251 # Protein_GI_number: 15901410 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Streptococcus pneumoniae TIGR4 # 1 123 1 123 126 215 89.0 1e-56 MAKTIHTDKAPAAIGPYVQGKVVGNFLFASGQVPLSPETGEIIGTTIQEQTKQVLKNISA ILAEAGTDFDHVVKTTCFLSDMNDFVPFNDVYATAFKADFPARSAVEVARLPKDVKVEIE VIAYLD >gi|304426803|gb|AEEM01000011.1| GENE 201 184351 - 186948 2781 865 aa, chain - ## HITS:1 COG:L104115_3 KEGG:ns NR:ns ## COG: L104115_3 COG3581 # Protein_GI_number: 15674220 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 473 855 1 379 403 587 75.0 1e-167 MTETLLEHNRAKSSLMGLDELDHFTTQKEFTRCGLCENNCALTVTIFNDGSKFVTGNRCE RGAEKVTKIKFDRSNQKENLVDYKYKKLFKFKALAKRDAVHGIIGVPRVLNMYENYPLWH TILTDLGFRVQLSPKSDKKLFEKGIETIPSDTVCYPAKMVHGHIQSLIDRKVDAIFYPSV IYEQIENSKAPNHYNCPIVQSYPEVIEKNMDPIRNGEVKYFHPFVNLADHESVVKSLIKA FSEYEDITAEDIQNAVEHGYQALADFKQDLQDKADELLSTLALKGEKAIVLSGRPYHLDP EINHGIANIITQEGFHVLTEDMVAGLEEVSGLRVVNQWVYHSRLYAAAKVVSKNPNLELV QLNSFGCGLDAVTTDQVEEIMRGHNKLYTVLKIDEGSNLGAIRIRLRSLKAAVEERDKKF KKANLDHIFNQAPQFDNQFDEEEERKEPVFTKEMKKTHTLLMPMLSPIHQNDLIEEAFKH AGYNVVILPAMDRKAVDVGLKFVHNDACYPAIISIGQLIEALQSGEYDLDNTSVMMTQTG GGCRATNYIPLLRKALKDAGFPQVPVVSISMGNQGTEETPGWSLTYSFVKRLLISVLYGD LFERVLYRVRPYEAVPGSANALYDKWLEIARKNVRSGSYFEFNHNMKHIIKEFDTLEIVD FGQKPRVGVVGEILVKYAPTANNDIVAIIENEGGEAVVPDLIGFMNYSLFNQIWKADELN MSQKAKRFAKLGIDAINLLEKPMNKALEKSERFEGIESIYDIAEGASKIISIGNHTGEGW FLTGEMIELLNNDVKNIVCLQPFGCLPNHIVGKGMVKELRRQYKGANIAPIDYDPGSSEV NQLNRIRLMMTTAKKMQKAALTSAN >gi|304426803|gb|AEEM01000011.1| GENE 202 186964 - 188739 2171 591 aa, chain - ## HITS:1 COG:L104115_1 KEGG:ns NR:ns ## COG: L104115_1 COG1924 # Protein_GI_number: 15674220 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Lactococcus lactis # 1 577 4 581 634 904 76.0 0 MYKAGIDVGSTTVKVVIFDDNYQLLFSRYERHFSDVKTATIKVLKEAISEIGDQTVSIAI TGSGGMGLADVAKIPFVQEVIAATTTVEKFIPQTDVVIELGGEDAKMTFFGDALEQRMNG TCAGGTGAFIDQMAELLKTDANGVNELAKGYETIYPIASRCGVFAKTDVQPLINEGARKE DIAASIFQAVVNQTIAGLASGRKISGNIAFLGGPLFFMSELRQRFIETLNIKPENVIFPE NPQLFVAMGAALDEDQAQLALSEIIHNLENNTSKSLVPKNTLDVLFKDQAELDAWRARHN EASVEYKDIAKASGPVFLGIDAGSTTSKVVLTDPEGAILFQHYGNNQGQPLENVIEILKE VYRQLPDTAFIARSCVTGYGENLIKAALHVDYGEVETVAHFKAANYFNPGVDFILDIGGQ DMKAMSVQDGALSSIQLNEACSSGCGSFIETFAKSLKYDVKDFAQVALLAEHPVDLGSKC TVFMNSKVKQVQKEGATVADISAGLSYSVIKNALYKVIKLKRPEDLGEKIVVQGGTFYNE AVLRAFELVSEREVVRPSIAGLMGAYGCAIIAQEKYEDETAQAPAVEMATV >gi|304426803|gb|AEEM01000011.1| GENE 203 189032 - 189643 598 203 aa, chain + ## HITS:1 COG:L108801 KEGG:ns NR:ns ## COG: L108801 COG1309 # Protein_GI_number: 15674221 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 203 2 204 204 170 43.0 2e-42 MKFTDIRYLRTEKLIFDAFAKLLSEKPYEKITVQDIADEAMINRATFYAHYADKDELQSG IQQQVLDQMSDMIDGAQITNGDRVKVKRAEKLLTDFYHGLEKNSAIAKIVLRSISQEVMQ EKFGTLLHEKYDHLLAKLNVTESGEQVPTEFIVAYLTSIFTGTLLWWIKSDFSMPAKELA RLVLTLISNGHLTVMGVIIDRED >gi|304426803|gb|AEEM01000011.1| GENE 204 189832 - 190107 310 91 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1066 NR:ns ## KEGG: GALLO_1066 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 91 1 91 91 99 93.0 3e-20 MEIKSDLSAAQQQATALTTAKEQLLADASSVTLDEQTTVQGNPKARIVIQRSGEMANQVK TALATTMEHLHSVASDFEAVDQEGAQAIKGE >gi|304426803|gb|AEEM01000011.1| GENE 205 190109 - 190417 461 102 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1067 NR:ns ## KEGG: GALLO_1067 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 102 1 102 102 127 87.0 8e-29 MKKYELEQQMEETYTSRRKTAELQETYDCYSGIVAQAEEFFWQDGYQSHYALRFEMALDL TSRYRHHLIGETDEALAELKKQEDDLEDALVDLLRKEAQDEH >gi|304426803|gb|AEEM01000011.1| GENE 206 190407 - 192104 1456 565 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1068 NR:ns ## KEGG: GALLO_1068 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 565 1 560 561 591 64.0 1e-167 MSIDMILEDSQSQAQTTTSYCQHQLEGYQAIQQAINQFVSDTESLKGKAYDSARAFAETV LQALARGGELYEETLSQLISKLPNDYIEMVDGKTWREDELLQRIDQQQQCLNVLEEAELQ LSLISVMSLERKTSLHQYHAELIEMHAELKQTYEEILEKLYAFDTYSASIFDALADIDTQ MTLGLSQIDQSWNAQTGTFQAMANMSWATVLNNQYAVKDVKATNEEKAFMANLMTQYGFD AETAQLILEVKRGIDKEFPKLSQNERDYLLLLTMGNFVYGEKAATSSGAIEKIWGYINDT MWVNTAGTYHEVDGRLQMLTAEEFLTYLGIKQEDINKLRYNVRLQNQMSSGALGNSKSIQ GTGNYKNIKKNVENLYGTMTDAEFEAFWDSKYQSYANQADFAHQSITMATILYQNPIRNA NLYTLNNEKTNDLAGWRGDTTDDAFVEPSIGNDDYKADLDAVNITELMKTGLSYQEATNR YYADLGKGTYTRADKFLEYKDLDDIKSTIYDSLVPKDYHELASGNSGYYVSKSEEECEQY LKEHYSATADFITALENGQNELYED >gi|304426803|gb|AEEM01000011.1| GENE 207 192108 - 192719 476 203 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1070 NR:ns ## KEGG: GALLO_1070 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 202 6 202 202 191 52.0 1e-47 MKRFKKWLIFSMSLVVLCLGYFTVRHYIIHNIFDEIYYNQKYSLGTPVLESLEVITNPVS DNASGGNRDREVYDLDSLPSGVVDIEYSFNFSNEYGDNTQFTIVVKQFLADDSTEVTTSY IYHSKTKILDRILWVKDETSGLTSNKEDVTNALEKNGTTYKKFTKKSDNVLKSIVLKDWC SVYNSRYSPDDWGDVTVKSRWED >gi|304426803|gb|AEEM01000011.1| GENE 208 192758 - 193366 531 202 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1069 NR:ns ## KEGG: GALLO_1069 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 2 199 7 197 199 224 65.0 2e-57 MKKKVFLLISVIVVVIVALVGYRWSVQEKLKNPFDEMIYSETQSTKVTLFTPLSTVIESD EHYKADEVLSILSYDDSILDNGEQLDVFISPSTLTFTYKLELEKQVYLDIFYTYDTDKSI LTQSAYLSDQTEEENEKTYHGDDLLTQLSAYGKDLNWLQSTSQTVLEDDILGLWFKKGSH RYSLDNLGDLTITYDDVLSGSN >gi|304426803|gb|AEEM01000011.1| GENE 209 193510 - 194274 839 254 aa, chain + ## HITS:1 COG:L90946 KEGG:ns NR:ns ## COG: L90946 COG4420 # Protein_GI_number: 15672474 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 21 247 25 251 290 192 45.0 7e-49 MSDEELIYDGVDHQLYPMVEGVFLSELDVRLRGIIKQEHPELSDNDFISNKNLTHYRMLF LDEMIDKANRKNDFVRESVYDVAKGKNYTALDVQDQLDKKITFGQRIADDVARFGGSWTF IISFIVFMVIWMAINVIKPFGIAFDEYPFILLNLALSTIAAIQAPLIMMSQNRASDYDRL QAKNDYNVNKVSEEGIRLLHTKLDHLVQQDQSDLLEIQKLQTEMLASITDQVVELQKQNK DLLEEMNALKQTQN >gi|304426803|gb|AEEM01000011.1| GENE 210 194300 - 195664 1371 454 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0719 NR:ns ## KEGG: GALLO_0719 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 454 1 454 454 856 99.0 0 MKKSMIITLLTILALFLLFCVVYVVKFGSVKKQFTYSTEVVSNPLMGYAPVATEETVTDD ITLLYVDITWRELESQEGVYNWDDIESENQFDRWRSEGKHLVLRFILDYPSNEKHKDIPD WLYNRLDDAGDWYDSDYGKGFSPNYESKVLIAAYEKAVQAMGERWGDDEFISFIELGGLG HWGEWHVDSTAGIRQLPDESVREEYVTPWLSAFPNANLLMRRPFTVASENGLGLYNDMAG NQEATQDWLDWIASGGVYSETGENDLVAMPNAWQTAPIGGELTSSDSMSSLLDDNLSQTI DLVAQSHTTFLGPKIAEDIGDDNASYDELLKNMGYRLWVTSASVKQSLSQKLTLKLTLKN SGVAPFYRNWTSYIYLKNKNDDSVQAIALDLDVTKILPDEEQSVSVELPVENLKKLEKNY SISLGIVDPMTNQNAIHFVVSGQEDTDTMLLFDW >gi|304426803|gb|AEEM01000011.1| GENE 211 195993 - 197993 1154 666 aa, chain + ## HITS:1 COG:CAC0731 KEGG:ns NR:ns ## COG: CAC0731 COG0451 # Protein_GI_number: 15894018 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Clostridium acetobutylicum # 218 543 291 607 725 71 23.0 7e-12 MFPEEKVIVLGKVSESKHRIRSIDWKNQTDIGRLLTVYHVTSILYFSKSVEPSKDLDGEL LQIRKILNALTEDFFVEFLYVTGPDLRFETENSRGVMLSAYEQLLCRYSQQQHFSLKILQ SLYLYQLSNSTDDLRSILTSDKDITLHPDQKAYYIFGRDLLDLCRRIFDNWTNTFERIEV PDSFGITFQQLFEELNIYGATFSEEAPLSVLKPQTSNLRKDYGWFPKVSLLEDLSTRDLP TSAKEQKTLSLADRLRKLAKLDKTSVKVIVLIVLFILGEMLSHLLSNQMYFKTVDYRLFA IVISGLSLGMFYGIWAAVFASIGLIIQNILAGETNLQTLFFEPANWIPYIIYLVSGLVSG YVKEKDQADLFRILAENEHLEQQLSDEESFVEDLLSEKVELTHQILERQDSYGRIYRFLE DLETPYLEIFMVKLLDYISNIFDTDEIAIYEVRDNQTSKLQLTTAQNTTHLMLTAEQLSK VSQQLVNNTVWVNQHLRDDYPMYLAGIFANGDLRYYLSLDHLPTDKLNLYHQNLLKSLMG LASLSYRRLYQKITSNVQHEILEEKVFCQKLLALRAVDSPYFVGQVLHLGVVAEEIPKTT LTSLQEELSLFDSLGQVESQLCLLINTYTQSLTDWHEKLSDLSFDVTDERNIEETIESIA FRQMMS >gi|304426803|gb|AEEM01000011.1| GENE 212 198007 - 198906 828 299 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0721 NR:ns ## KEGG: GALLO_0721 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 299 1 299 299 540 99.0 1e-152 MLFAVFLGCHLIIVVSFFLVAKMKTIQLDFYLKSLLVFLPLIGAISVLYILKDRKSRFVD GELAFEEVIPWLIDDTVEQNQLEMKENVMLDITNIVPFQEALLLNNSGIKRELIIDVIFE SPDQFVPLLHQARLNEDVEVVHYATTILSELTAKYDERLRQLEERVQKEPDSLEKRQKYA DFLESYINSGIAEGHYGLTLKQAYIDEVEDLLAKGFLVEKSRLLTLAEIYQSLGDFASLE RLLTKLFEFFPDDQDIWMLKLDTIVLKKSSSDLKRFWQDLEQNHVYFSAENKAKLAFWQ >gi|304426803|gb|AEEM01000011.1| GENE 213 198926 - 200752 1574 608 aa, chain + ## HITS:1 COG:CAC0733 KEGG:ns NR:ns ## COG: CAC0733 COG4878 # Protein_GI_number: 15894020 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 52 608 46 600 600 258 31.0 2e-68 MFKKRTFKFTLILPVFLILVVLAVGLLIERNGISYYSDTSDSYYLSDNQVKTKAEALANV SATNLLIYDSSNETSASAIDNFKQIFEDMKVATTYVDIANETVPDFTTFDTVVILTPDLE PLGEVALRLMEWVESGGNVMFAMTLQKDDVVSIIEHKLGVVNSSYTYAEVAEVSIKNGFM LGAGQDYNIDEPFESAWAVELDDNAEVYLTTGDDSKIPLVWEYDLGSGRVVVDNFGIYVK AMRGFYSASYSLLGDVGVYPVINSAAFTLDDFPSPVPSGDAKYITRDYQMTVSDFYTNVW WPNMVSLADKYGIKYTGVIIENYEDDTIGSTERQSDSSRFTYFGNMLLQMGGEIGYHGYN HQPLMLSDTDYGDAFSYNTWTSDTAIEKSLDELMDFTENLFPTSEHSVYVPPSNILSAES RALLAKDYPNIKVIASNYFSEEFVYEQEFEVADDGIIEEPRITSGAIIDDYTKLTMVSEL NMHYVSHHFVHPDDPLDVDRGAKLGWAQLYKNLSKQMSWLYKTAPSIRNMTESQMGGAIQ RFSSITVEKEETDDSYQFNLGNFVDEAYLMVRFNSDKPGDVTGGSLEHLTGNLYLLHATS STVTIAKK >gi|304426803|gb|AEEM01000011.1| GENE 214 200781 - 202181 980 466 aa, chain + ## HITS:1 COG:CAC0734 KEGG:ns NR:ns ## COG: CAC0734 COG0438 # Protein_GI_number: 15894021 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 1 462 1 464 471 412 43.0 1e-115 MRICLILEGCYPYVNGGVSSWMHNYINEMTEHEFVLVTIGANAESRGKFKYELADNVVEV KEVFLDDAFQVSGNSDFKETFNDTERQALKDLLSCQSPNWEVLFDIFNQRQINPTDFLES QLFLELLTEIVEEKHQNQAFADVFHTTRSMLLTVLYLMTQDMPKADVYHSIATGYAGLLA SLGSYQHQAPLLLTEHGIYTREREEEILRSDWVLPTMKRQWIQFFYMLSNLIYDKAERVT SLYTKAKFIQEEVGCDIEKCRVISNGIHYDRFSAIPLKEEDGWIDIGAVVRIAPIKDIKT MLYVFYELSRNYPNTRLHILGAVDDEDYNRECHQLIRQLGIKNVIFTGQVNVVEYMENLD FTILTSISEAQPLSVIESMAARRPCVTTDVGCCRELLEGNKDDHLGIAGYCIPPTYRTGL THAIEKMCSSRQLRLKMGEIAQKRAKTYYLYEMMIQQYRDLYLEVV >gi|304426803|gb|AEEM01000011.1| GENE 215 202181 - 203662 1180 493 aa, chain + ## HITS:1 COG:CAC0735 KEGG:ns NR:ns ## COG: CAC0735 COG4267 # Protein_GI_number: 15894022 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 471 1 468 478 175 28.0 2e-43 MAGIGFAINKVVREKRLTSKPRAFAYASIVTVAPLLLGELVLLTVFILSNLAKVTITDRN LIVAIITYGLLGSLLLNGLVSLVISRYLSDQIYSRDIRHVLTSYWGSQFFTLAIGGSLYG IFLLFSHLGWLYGILAWLLFCELLLSWNVINYLTIIKDYWGIFRAFLATIVTTLVMSVIF LFIHLPVVIASLAGIIFGYASFFILATNLLYQQFPNKLDYHHMFDFLNGFDDYWELAVIG LCTQLGLLGHIVVIWFSQIGQQVRGFFYIAPYYDLTVFIASLTMLATTVRFIVSMEVDFF NTYRKYYLSFTNGATLQEIKKAERDMTDSLRKGLGRTVWVQLMVTLLAISVGTTILNALP LGFNTTMNGYFRILCVAYAVYGMANVVTLSTIYFGNLSGSYRASIAFALTSILATVASLY TNSLFYGFGFLLATMLYFVMSWLNLEKISSNLTYQILGRQPLIYGEKDGVFHHLASFLNQ KMLALTRKGNYEK >gi|304426803|gb|AEEM01000011.1| GENE 216 203652 - 205430 1701 592 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0725 NR:ns ## KEGG: GALLO_0725 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 592 1 592 592 1025 99.0 0 MKNNKSFLLVILLLVVTAGLVLIVGLFTNNDDDDSSDTTTQSTTTVAEDSYHLTDNDALY ETEDYKDVQTMYLTVSRGNDSDNTNHSWSEVNNLSVYDYEKMGVDRYKISALLQVGDENG PVAGELGYGESTPNATVQIRGQSSSKNQQKNYKIKIKQNKGSWYGQRTINLNKHQTESLR FRNMMSYVLLQDIPQVLSLRTQFVHLYVKDTTGDNPDEFVDYGLYTQVEQLNKTGMKSHN LDSSGQLYKVNYFEFTDPDNVIKLASDPDYDEEKFEELLEIKGSTDHTKLIDLIKKINDT SIDFEDVLEENFDVENLSYWMAFQILMGNHDTQSRNMFLYSPLNSQRWYIIPWDNDGSLF ETEYQIRGSKGDAEWETGVSNYWGNMLFQRALKTKSFREALDAAIEDLYNNYLTQDRITS LSNELASVVKPYISETPDSTYLGISMADYQTVLDALPSEIKGNYQKYYDSFKKPMPFFIG VPSKTSDNKMKLTWDNAYDFDSEDITYTVEVSKNYDFSSTIYKKENLKLTSTEMDLPDAG QYFIRVTATNASGESQVAFDYYVTSEDGKVSGVKSFFVNADKSISEDTYEED >gi|304426803|gb|AEEM01000011.1| GENE 217 205417 - 206145 658 242 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0726 NR:ns ## KEGG: GALLO_0726 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 242 1 242 242 452 100.0 1e-126 MKKTKEAFRHEQKYLISLKDKHLIRQRIRNIMALDKHVKQESYTIRSLYFDDYWNSAYED KQAGVLIRKKYRIRIYNYTDQVIKLERKRKHGAYIYKEDAPLTKEEFYKILDGDYGFLLK SPHQLCREFYVECMANVLRPRTIVDYEREPWTLEAGTVRVTFDENIRAAVGSFDIFDANL PTLEVLEPEKLVLEVKYTEFYPDIIKEIIPADATEYTAVSKYVLCYDKTNYSRSLNDYWY DN >gi|304426803|gb|AEEM01000011.1| GENE 218 206172 - 206837 806 221 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0727 NR:ns ## KEGG: GALLO_0727 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 221 1 221 221 370 100.0 1e-101 MSINDVLKNSFVSSYTGDDLGQILLSLVVSIIMGAVIYLIYRQFFTGVVFSRSFAVTLVG MTILTCMVTLAISTNIVISLGMVGALSIVRYRTAIKDPMDLLYIFWAITTGITVGAGMYL LAMVAAVVMVALFYIFYRNQQAGKVYIAVIHYHHDETEEKILQSFGKMKYFLKAKTVRKG LIELSVEVFCKDENLSFTDKIQALEDVDDVTLIQYNGEYHG >gi|304426803|gb|AEEM01000011.1| GENE 219 206872 - 207885 1195 337 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 1 337 1 337 339 453 64.0 1e-127 MSVLLTGGAGFIGSHTAVELISAGYDVVIVDDFSNSSQEVLNRLKIITGQKIPFYKGSIL DKNFLNNVFYENDIEAVIHFAAFKAVGESVEQPLSYYQNNLTGTLTLLEVMKNHHVNHIV FSSSATVYGMNNVSPLTEDLPTSATNPYGYTKVMIEQILTDVAYADKDLSVSNLRYFNPI GAHESGLIGEAPNGIPNNLVPYISQVAVGKLKELSVFGNDYDTPDGTGVRDYIHVVDLAK GHVAALKKNLASKGVAVYNLGTGHGYSVLDLVKAFEEVNHVSVPYVIKGRRAGDIATCYA DASKAKEELGWTAQKTLQDMMRDSWRWQSQNPNGYQA >gi|304426803|gb|AEEM01000011.1| GENE 220 208058 - 208948 1051 296 aa, chain + ## HITS:1 COG:SPy0652 KEGG:ns NR:ns ## COG: SPy0652 COG1660 # Protein_GI_number: 15674720 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Streptococcus pyogenes M1 GAS # 1 296 1 296 296 504 82.0 1e-142 MSDKSINLVIVTGMSGAGKTVAIQSFEDLGYFTIDNMPPALVPKFIELIEQSSDNNRVAL VVDMRSRLFFNEINSVLDKIDANPKVDFKILFLDATDGELVARYKETRRSHPLAADGRIL DGIKLERELLAPLKNLSQNVVDTTELTPRQLRKTISEQFSSEENQASFRIEVMSFGFKYG LPLDADLVFDVRFLPNPYYKPELRDQTGLEQEVYDYVMNHEESEDFYRHLTGLIKPILPG YQKEGKSVLTIAIGCTGGQHRSVAFAHRLAEELKENWAVNETHRDKNRRKETVNRS >gi|304426803|gb|AEEM01000011.1| GENE 221 208945 - 209922 939 325 aa, chain + ## HITS:1 COG:SP1565 KEGG:ns NR:ns ## COG: SP1565 COG0391 # Protein_GI_number: 15901408 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 324 1 325 325 517 77.0 1e-147 MRKPKITVIGGGTGIPVILNSLRHEEVDITAIVTVADDGGSSGTLRSVTQLTPPGDLRNV LVAMSDMPKFYEKVFQYRFAETDGALAGHPLGNLIISGIAEMQGSTYNAMQLLTKFFHVT GKIYPASENPLTLHAVFKDGHEVIGESHIADYKGMIDHVYVTNTYNNEEPTASRKVVDAI MDSDMIVLGPGSLFTSILPNLVIPEIKKALLETPAEVAYVCNIMTQYGETEHFTDADHVE VLNRHLGKDVIDTVLVNIQEVPQDYMNSNEFDEYLVQVEHDFAGLRKQVKRVISSDFLRL ENGGAFHNGDFVVEELMNLVRMRKR >gi|304426803|gb|AEEM01000011.1| GENE 222 209919 - 210830 966 303 aa, chain + ## HITS:1 COG:SPy0654 KEGG:ns NR:ns ## COG: SPy0654 COG1481 # Protein_GI_number: 15674722 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 303 1 303 303 442 75.0 1e-124 MSFTVKVKEELLNLSRFDESELSAIIKMSGSLGLTGDGLTLSITTENAKIARHIYELLEN LYHVQPEIKYHQKTNLRKNRVYNVFVAANVREILNDLQLADSFFGIEMGINPTILEDDNK GRAYLRGAFLATGTIRDPESGKYQLEIFSVYQDHAEDLANLMRKFILDAKVIEHKNGAVT YLQKAEDIMDFLLVIGAMECKDVFEEIKIMRETRNDVNRANNAETANIAKTVTASMKTIN NIIKIMDTVGLETLPIELQQVAKIRVENPDYSIQQIADHLEGTLTKSGVNHRLRKINKIA DEL >gi|304426803|gb|AEEM01000011.1| GENE 223 210853 - 212250 1849 465 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 465 9 472 472 759 77.0 0 MACTTILVGKKASYDGSTIIARTEDSQSGDFTPKQFIVVKPEDQPRHYKSVLSSFEMDLP DNPMRYTSVPDALRKDGIWGEAGINEANVAMSETETITTNARVLGADPLVESGIGEEDML TLVLPYVRTAREGVERLGAILEQYGTYESNGVAFSDVNEIWWLETIGGHHWIARRVPDDC YVTNPNQLGIDHFEFNNPDEYMYSKDLRDFIASNNLDLTYSNEHFNPRYAFGSQRDKDRH YNTPRAWAMQRFLNPEIEQDPRSFFIPWAQKPYRKITIEDVKYVLSNHYQDTEFDPYGPE GNAVTQRAFRTIGINRTSQTAILQLRPDQPHDTTGIQWLAYGSMPFGTMVPFFTQISTTP AYFANTGENVSTDSFYWANRLIAAIADPHFHQHEGDIEDYIEKTMAAGHARIKRVDAALA NGENIDFDAENQAMSDFVQEETQKLLNKILFDASNLMTNRFSVSD >gi|304426803|gb|AEEM01000011.1| GENE 224 212420 - 213286 717 288 aa, chain + ## HITS:1 COG:SP1115 KEGG:ns NR:ns ## COG: SP1115 COG1396 # Protein_GI_number: 15900982 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 283 1 285 287 145 32.0 1e-34 MKHLGKLFKKYRVSRGLTLRDIAEAGISTSQLSRFEQGKTDLTITRLALVLEEMNVPIAE FMHVAGDSQRNHLERLLERIHYYHSVQDIAGLEYLLAAERTDNTANELFQHLNTILIRIY LHDLSKEDDDLADELAYLSEYLFSVENWGCYELLLFKNAFVAFNHRTFIRLSEELKQRTA VYQDLPANRQLRLDILLNGYLMCIERDELSDALYFEKQLTAASLTETELYERLVFHYGKY FYQFKKSQSEQAILEMQNAIKVLTLASSDQLAQKYQKHLERLIGKGKE >gi|304426803|gb|AEEM01000011.1| GENE 225 213290 - 214375 750 361 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0736 NR:ns ## KEGG: GALLO_0736 # Name: not_defined # Def: putative transporter # Organism: S.gallolyticus # Pathway: not_defined # 1 361 1 361 361 541 98.0 1e-152 MPVNRYRALLLMNVFSASLPYYFVSLLLLRQLGFSYTVIGTLSVVTELFGTVFDLPLSIC AQKFGYQRLLILSHLFLLVGLGALMNGKLVFAFLAAVFMGLSESLSSGTLVSFNFDVLAN EKEYAKFLKNSNTIKYVFIAFVTIISPFLLKQSVLYPLILSISFVMISLICLLKLPNKIV KSDSKEASALLSGIRLAPWQLMILGVSFTTLIMVNNSYASLLLTDKGISLDVLGIILFLF NLGMASGSYLKIEWKYTLVIPILVVLISMQTEVHLIILLFLLIRILNANYNNQLMLKMNQ TIKENRAVAWSLYNFAISISFMLADFLAGLIADRFGLLMVYRVFGLSATFYLIYYCWKKC K >gi|304426803|gb|AEEM01000011.1| GENE 226 214544 - 216058 1980 504 aa, chain + ## HITS:1 COG:SPy0714_1 KEGG:ns NR:ns ## COG: SPy0714_1 COG0803 # Protein_GI_number: 15674772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pyogenes M1 GAS # 1 311 1 322 322 399 64.0 1e-111 MKKKFLLLINLVALLFAWQISHIKQVSADDKIDVVTTFYPVYEFTKAVTGDTADVTMLIK AGTEPHDFEPSTKNIATISDADVFVYMDDSMETWVDSVEKSIDSDSLTVVKSTGDMLLMA GTADEDDEDSDDGHTHEYDPHVWLSPKRAITLVENIRDAFVAKYPDKADTFNSNAAAYIE KLNDLDAEYTEALSNAKQTSFVTQHAAFGYLALDYGLTQIPITGVSAESEPSAKRLASLT KYIKKYDIKYIYFEENASSKVASTLADEAGVKTAVLNPIESLTSKQIKAGEDYFSVMEEN LKALQLTTDVAGKTIKAETDTTKTVQNGYFKDKDVTDRSLSDWSGKWQSVYPYLLDGTLD QVWEYKAKASKGEKTSEEYKEYYTTGYKTDVEQINISGKKNTITFIKNGEKYKFTYKYVG YKILTYEKGNRGVRYLFETDDENAGEFKYVQFSDHNITTTDAEHFHIFWGGESQDALLEE MDNWPTYYPTSLTGQEIAQEIVAH >gi|304426803|gb|AEEM01000011.1| GENE 227 216422 - 217156 845 244 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0738 NR:ns ## KEGG: GALLO_0738 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 244 1 244 244 453 99.0 1e-126 MVKALETSFKRIEKKYVLDKEKLGAIWDDLKEHLVEDDYPTSTITNIYFDTADFQVIQDS IAKKNGREKIRMRTYVTNPTEDSQAFLELKKKDAEGIGHKFRLVSETGAIKQFIESGKLT HATSEDQLLIDELNTLKERYGDLSARMLIYYERSSFKEKHHIKGQPQTKIRVTVDQNVTY RDYDVEKSMGNYGSELVGDGKVIMEIKTPGPQPEWLKAILMKHGIESTSFSKYGTAYRKS QGIV >gi|304426803|gb|AEEM01000011.1| GENE 228 217179 - 217871 735 230 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0739 NR:ns ## KEGG: GALLO_0739 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 5 230 1 226 226 381 99.0 1e-105 MIIVLSLFNSVYTGASATVNPLMVALSLLVSLILGAALAWVYRYRTLYTKEFVITLTILP SLLSVIIFLVNGSLGTSVAVAGTFSLVRFRSAAGGARELLALFLAMTIGLSTGMGYLTLA ILTTIVFLVIWLGLEKMTFFSSGQTVRHLVIDLPKDRKDEKLIRHILHQFCRDIELVSLK SSHSGEHLTLTYQIDLNSDDDDVLLTDELVEHIVDIDISMTKLAKKKKNL >gi|304426803|gb|AEEM01000011.1| GENE 229 218004 - 218759 594 251 aa, chain + ## HITS:1 COG:SPy1582 KEGG:ns NR:ns ## COG: SPy1582 COG0500 # Protein_GI_number: 15675471 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 251 1 251 251 317 61.0 1e-86 MAKKEIGHHFLARLGKTRLRPGGVKATNWLVEQGNFSKDSKVLEVACNMCTTSIELAQTY GCQIIGVDMDSKALEKARVNIANAGLENHIHVQQGSALKLPFPDNSFDIVINEAMLTMLR GEAKAKAIKEYLRVLKPGGRLLTHDVSYVSDKAEVKLHQLSQTINANVEPLHVNHWQELF QAIGFSSVEATYGNMTLMSLSGMIRDEGFLKTCQILYRGLQKENRSQFTKMYSFFNKIGK DLRYIAVVSTK >gi|304426803|gb|AEEM01000011.1| GENE 230 218772 - 219119 499 115 aa, chain + ## HITS:1 COG:SPy1581 KEGG:ns NR:ns ## COG: SPy1581 COG1917 # Protein_GI_number: 15675470 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Streptococcus pyogenes M1 GAS # 1 111 1 111 112 145 70.0 1e-35 MAYIEKLEHNKVLDLKKIVPIEEEQMLSKTLVQRDDLGMTIFSLDKGQEIGRHSSLGDAM VNVLSGVAKITIADDDYIVKAGESIVMPAEVPHALYAEEAFQMLLIVVKPEVKHD >gi|304426803|gb|AEEM01000011.1| GENE 231 219112 - 219420 263 102 aa, chain + ## HITS:1 COG:SPy1580 KEGG:ns NR:ns ## COG: SPy1580 COG1917 # Protein_GI_number: 15675469 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Streptococcus pyogenes M1 GAS # 1 100 1 100 101 80 49.0 5e-16 MIKDLKTLVKYHDGQIASRSLSKTLEVANSITLYAMAKGESISRESSHNAKLIYVLEGNL QLKTDSATVNLTPDNIETIPAQMLHDFLVLEACKFLQIELLV >gi|304426803|gb|AEEM01000011.1| GENE 232 219505 - 220221 757 238 aa, chain + ## HITS:1 COG:SPy0857 KEGG:ns NR:ns ## COG: SPy0857 COG1705 # Protein_GI_number: 15674890 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 1 234 1 231 235 221 59.0 7e-58 MKEKRITKFFLTCATLVTCITLGVNLCFQHSTKAVVAESSETSDTATADFIASIGETARQ IGQERNLYASVMIAQAVLESSSGQSALSQSPYYNFFGIKGSYNGNSVTMLTWEDDGNGNT YEVDQAFRSYDSLSDSLNDYANLLSWDLYSGTWKSNTTSYQDATAALTGLYATDTSYADK LNALIEQYGLTVYDEPASTEEETSSEDNSDHVWNEYRGSYTTAAILAEDEAWLRFISQ >gi|304426803|gb|AEEM01000011.1| GENE 233 220714 - 221253 309 179 aa, chain - ## HITS:1 COG:no KEGG:SDEG_0289 NR:ns ## KEGG: SDEG_0289 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 3 179 4 156 156 154 51.0 2e-36 MTEKAFYYFHHDLSKKDKGGIEPIYTGKNLLNLLWWTFIHTDYSNYVDIESDVQDDVTKA VRETKEFKDFYESELQLRCIKQELKNYNIHFAYATDKELERYNAEFGYETSEEHKGKMLI GIAPTDEENYVRGYLKFIEDISNDDTRFGIYHRLIKSEKTMLPIERINYIKKLTKKNLK >gi|304426803|gb|AEEM01000011.1| GENE 234 221426 - 222682 1230 418 aa, chain - ## HITS:1 COG:no KEGG:SDEG_0288 NR:ns ## KEGG: SDEG_0288 # Name: not_defined # Def: recombination protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 418 1 418 418 460 64.0 1e-128 MSYIVARMEKYKSSQLSGIYNHNERVFKNHSNKDIDPSRSHLNYELTNRDRTQTYHKQIK EHINENRISSRGIRKDAVLCNEWVITSDKTFFESLDQEQTKKFFESAKNYFAEKYGEANI AYASVHLDESTPHMHLGIVPMKDGKLSSKALFGSREKLREIQDELPKYLNKQGYHLQRGE VDSKKKHLKTEEFKEKQKILKMADKAIDKKNSEIDNAKSQLNNLQNDIDNKKQVLSELEN KEWETVGTIEKYEKEIKELSDLKIDLTELDNFNIDNLQKNNLIKRTFDGKLKMDKETFEK LYHTAKKNISDNTKLKQELNKLQSENNQLSRNLLSYRKTSDENLILKQENRQLKDKVKTL DSQVTLLNKKVAIWREKAKEFMPKPVFQNTLSLVNSLSPIGLAKTVVRQVKNLVDKNS >gi|304426803|gb|AEEM01000011.1| GENE 235 223000 - 223434 244 144 aa, chain - ## HITS:1 COG:no KEGG:SDEG_0287 NR:ns ## KEGG: SDEG_0287 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 144 1 144 144 155 60.0 3e-37 MRIKDYAESQGVTTQSVYKKIRSTKYKNRLNGHLYRDNQKVENLDLIGIKILEDYAFEND VIKLEHELNKLKKTNKEEKQDMQIRIDKLANKLTSSLENRNNLIQERYDLLDYIRCLERQ RIILLIVIITIVLSFLIVISFTLF >gi|304426803|gb|AEEM01000011.1| GENE 236 223492 - 224343 383 283 aa, chain - ## HITS:1 COG:no KEGG:SAK_0284 NR:ns ## KEGG: SAK_0284 # Name: not_defined # Def: replication initiation factor family protein # Organism: S.agalactiae_A909 # Pathway: not_defined # 1 281 1 281 291 422 78.0 1e-117 MDIKVSLDNITITAYVKTKKLHLLKELVESHVAIIVTTAMTDLFNASTKAEGRVILKIDY DKRKGQAFHARPFRLEFNPNKLRPIDKKIIDTIIPCLEDISISRADLAFDLFEVDCSEFV LEKKGRPTATKEFRSNLGKLETKYLGASRSEKQIRLYNKKIEQLENGTPAEKEFAKHFSN WWRLEFQLRNRSVEEIFDVINSIIFKPFDFTDLPVETQIYLVAYTRDKNVWKKLHRNTRT KYKKILESYKTSEIDYLELLKELLKHERPRLEKELAYFSGRTP >gi|304426803|gb|AEEM01000011.1| GENE 237 224635 - 225273 367 212 aa, chain - ## HITS:1 COG:no KEGG:gbs0216 NR:ns ## KEGG: gbs0216 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 1 212 2 213 213 223 53.0 3e-57 MKIYFGNDEENNLLVKKRLESFKIDYEEYSSKDIDYQTLLNWFTNSSDMFEFLQPRLMRY KLDSKLTFNQFVLKILTDIDNSLKLPLVVTDTEILPGLTPGEVTIFLPAEYRKTERIQLY HQLNQLDNERRFWRNLKIFREQSGLRWFEFNQLMFSDTSDDLGEVKKAKDKFFTYKRNLK IPPQDQIEKAAKILMVEPEDFFTKTVSDLQNF >gi|304426803|gb|AEEM01000011.1| GENE 238 225278 - 225604 436 108 aa, chain - ## HITS:1 COG:no KEGG:gbs0215 NR:ns ## KEGG: gbs0215 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 1 108 1 108 108 157 76.0 8e-38 MDYDSENFLIPKILFQDEFYSELSFNDIFVYSVLKDKQIEAAEKGWIDTDGSVYLSYTMK ELAKMFSCSKETMIKIMRRLEEFNLIEREREDVFYGYSLPYRTYINEV >gi|304426803|gb|AEEM01000011.1| GENE 239 225612 - 225890 335 92 aa, chain - ## HITS:1 COG:no KEGG:SDEG_0282 NR:ns ## KEGG: SDEG_0282 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 92 1 92 92 138 81.0 7e-32 MSEEFILQLPKRKEKELLARYDNMLQTAIEKALEDKELYKPLVRMSGLSRWLDVSTTTIA KWQKEGMPYMVIDGVTLYDKRKVAQWLQQFER >gi|304426803|gb|AEEM01000011.1| GENE 240 226023 - 226622 618 199 aa, chain + ## HITS:1 COG:no KEGG:gbs0212 NR:ns ## KEGG: gbs0212 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 12 198 1 183 183 142 43.0 5e-33 MIKYSPSGGVLLDNRVNELRKQFGKTMKELSAETGIGLSTISNYENGYSTPKKKNAQILA NYFGVSVPYLLGLDDNPVLKNPSEDSFVKLFVKFLKDGSVVSKKIDDWTPFKDDVAGLLA DISGTGILESHIDFLIKEKGYHPIIVKAYKQFLKEQSDTVFPYLLNKSGDKSSPYHYVWE EWEKSEEYKVMQKARQKKD >gi|304426803|gb|AEEM01000011.1| GENE 241 226677 - 227834 488 385 aa, chain + ## HITS:1 COG:L55605 KEGG:ns NR:ns ## COG: L55605 COG0582 # Protein_GI_number: 15673415 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 1 380 1 357 359 154 30.0 2e-37 MSIIKYKAKKSKTGYLYKVRIYRVIDGKRHDYFKSGFKTRREAKEHEAIIYHKKLTGELT ELLKASERTFEEVFEEWFKTYQDTVERTTSVRTDDMFRLHILPILGNFKISKITPWQCQE FITEKGKTFRNIKQVKSYANQVFNFAVKMKLIAENPMRDITLPKRDHKQSDNFFNVDELH EFLAIVKAEESYKDYALFRLLAYSGLRKGELYSLRWSDIDFDKQILSITKNLGRIRGKAV EKRTKNRFSVRQIPLDDETISILREWKVRSKKEKGQLSVTPLIENDYIFTFVDRDGKIQP LYQDYINYNLKRIIDKHNLKKISPHGFRHTHATLMIEIGVDPVNAARRLGHASSQMTLDT YSHVTEAGGERTIKKFADYLKKSNN >gi|304426803|gb|AEEM01000011.1| GENE 242 227936 - 228181 390 81 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15901159|ref|NP_345763.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae TIGR4] # 1 78 1 78 80 154 92 3e-36 MKQNIHPEYRPVVFMDTTTGYKFLSGSTKSSNETVEFEGATYPLVRVEISSDSHPFYTGR QKFTQADGRVDRFNKKYGFTK >gi|304426803|gb|AEEM01000011.1| GENE 243 228341 - 229285 1152 314 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 6 310 5 309 311 448 70 1e-124 MNNTFEEILEKIKAYDTIIIHRHQRPDPDALGSQVGLRDIIRHNFPEKKVLATGKDEPTL TWLTKMDTVSDDDYQGALVIVTDTANTPRVDDDRYTKGDFLIKIDHHPNDDAYGDLLYVD TTASSASEIITDFALSTNLALSNEAARLLYCGIVGDTGRFLYPATTSKTLSIASKLREYN FDFSTLARQMDSFSFKIAKLQGYVFDNLEVDENGAARVVLTQDTMKKFNVTDAETSAIVG TPGRIDCIQSWAIFVEQADKHYRVRLRSKSQVINEIAKRHGGGGHPLASGANSYSLEEND EIYQEIKDLLTPKD >gi|304426803|gb|AEEM01000011.1| GENE 244 229282 - 229410 111 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENAEIHAYLQTSYTSFGFKTISDEYLENGIPHIDMILENKR >gi|304426803|gb|AEEM01000011.1| GENE 245 229741 - 230004 526 87 aa, chain + ## HITS:1 COG:L120335 KEGG:ns NR:ns ## COG: L120335 COG1925 # Protein_GI_number: 15672099 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Lactococcus lactis # 1 87 1 87 88 123 87.0 8e-29 MASKDFHIVAETGIHARPATLLVQTASKFASDITLDYKGKAVNLKSIMGVMSLGVGQGAD VTISAEGADADDALAAIEETMTKEGLA >gi|304426803|gb|AEEM01000011.1| GENE 246 230009 - 231742 2213 577 aa, chain + ## HITS:1 COG:SP1176 KEGG:ns NR:ns ## COG: SP1176 COG1080 # Protein_GI_number: 15901041 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Streptococcus pneumoniae TIGR4 # 1 577 1 577 577 1012 93.0 0 MTEMLKGIAASDGVAVAKAYLLVQPDLSFETVTVEDTSAEEARLDAALKASQDELSVIRE KAVETLGEEAAAVFDAHLMVLADPEMISQIKETIRAKQTNAEAGLKEVTDMFITIFEGME DNPYMQERAADIRDVSKRVLAHLIGAKLPNPATIDEESIVIAHDLTPSDTAQLNKQFVKA FVTNIGGRTSHSAIMARTLEIAAVLGTNDITSRVKDGDIVAVNGITGDVIINPTEEEIAE FKAAGEAYAKQKAEWALLKDAETVTADGKHFELAANIGTPKDVEGVNANGAEAVGLYRTE FLYMDSQDFPTEDEQYEAYKAVLEGMNGKPVVVRTMDIGGDKELPYFDLPKEINPFLGFR ALRISISETGNAMFRTQIRALLRASVHGQLRIMFPMVALLKEFRAAKAIFDEEKANLKAE GVAVADDIQVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQP YNPSILRLINNVIKAAHAEGKWAGMCGEMAGDQKAVPLLVGMGLDEFSMSATSILRTRSL MKKLDTAKMQEYANRALTECSTMEEVLELSKEYVDFD >gi|304426803|gb|AEEM01000011.1| GENE 247 232145 - 233575 1972 476 aa, chain + ## HITS:1 COG:SPy1371 KEGG:ns NR:ns ## COG: SPy1371 COG1012 # Protein_GI_number: 15675303 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 474 1 474 475 783 86.0 0 MTKQYKNYVNGEWKLSKEEIKIYAPATGEELGSVPAMSQEEVDYVYASAKAAQKEWRALS YVERAAYLHKAADILVRDAEKIGAVLSKEIAKGYKSAVGEVIRTAEIINYAAEEGVRLEG EVLEGGSFEAASKKKIAIVRREPVGLVLAISPFNYPINLAGSKIAPALISGNVVALKPPT QGSISGLLLAEAFAEAGLPAGVFNTITGRGSVIGDYIVEHEAVNYINFTGSTPVGEHIGK LAGMRPIMLELGGKDSAIVLEDADLDLAAKNIVAGAYGYSGQRCTAVKRVLVMDSVADKL VAKVSELVKDLTVGMPEDDADITPLIDTKAADYVEGLIKDAQDKGAKEVISFKREGNLIS PVLFDNVTTDMRLAWEEPFGPVLPVIRVNSVEEAVEISNKSEYGLQAAVFTNNFPLAFKI AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGTQGVKYSIEAMTTVKSTVFDIAK >gi|304426803|gb|AEEM01000011.1| GENE 248 233759 - 235402 1734 547 aa, chain + ## HITS:1 COG:APE0033 KEGG:ns NR:ns ## COG: APE0033 COG1866 # Protein_GI_number: 14600399 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Aeropyrum pernix # 189 479 140 434 493 78 26.0 3e-14 MVTRNQFSTLEMRKASPYFSALKTIVETAFYENQVISIKTLEEAYQLASNAAGTVILDMP VIHTKELGLPSYARVLLTNSGAVVGRTAKARRIYGLDSDEDERLLSIVRSAVYQAHSRKF YKADAIVGLDEEFMVRAHLMVPEEEINNLYSWLLNFQILDEEFKNRLKVSKRYDEDDIFV FFDPKWSHPDYPDGLAYFDTNHNCVAILGLNYFGELKKATLTLAWGTAARNGYVSCHGGL KIFQGKEEKNDYVASFFGLSGSGKSTLTHAKHNGKYDIKVLHDDAFIISEKDGSSIALEP SYFDKTNDYPTGHPEQDFFVTVQNCGVTLDDNGRKKLMTEDIRNGNGRTVKSRFATPNRV DHIEEPINAIFWIMKDDSLPPLIKINDPLMAATMGCTLMTKRSSAENIEGSKQSLVIEPF ANPFRVYPLVEDYQKFRSLFASGVDCYIINTGFYMGNGIPKEVSLDIIEKIVDGNADFKA FGPIEGFEYLTLEDYPVHRFDTKYKQLIRSRMQIRLNFLLSFNQNNPKLALPVEAISRLE RVINNLK >gi|304426803|gb|AEEM01000011.1| GENE 249 235708 - 240429 5578 1573 aa, chain + ## HITS:1 COG:SPy0416 KEGG:ns NR:ns ## COG: SPy0416 COG1404 # Protein_GI_number: 15674549 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Streptococcus pyogenes M1 GAS # 1 1071 1 1122 1647 680 39.0 0 MDKKERFSFRKYKVGLVSVLVGAVFLAAGAGRVSADELSKAAGVSQTDPASNIEQVVQAT ESSSTADFAQVASVETTIEASRVESTATASATADEVALASKTQETVSEELSSPAATSEAT AVGNVANAQESSASSEVAEEIAQDVEASAASVSSEVVTEVTEKAQPEEQTLDSATPQSID SDELITVPEAWESGYKGQGTIVAIIDSGLDVDHDVLHISDLSTAKYGSEEEIEAAKAAAG ITYGKWFNDKVVFGYNYVDGNTILKEGEEASHGMHVTGIATGNPTKALGDEYIYGVAPEA QVIFLRVFSDLKSSTGPALYVRAIEDAVKLGADSINLSLGSTTGSEVNIEQTLIDAVKAA QKAGVNVVFAAGNEGAFGDSINPSAENPDYGLVGNPSTTQDVISVASYNNSITRSNVVTF VGMEDNAELNNGKSSFTNPDKSDKKFENGKAYDYVYVGTGTAEELEGVDLTGKLALIQRG GLTFSEKIANATAHGAEGVIIFNNDPDGSNVSMAIDDTAIAIPSAFIPYKFGIELAKGGY QIKFSDVAEKFDNPGVGKFSSFSSWGLTTDGALKPDVAAPGGSIYSSYNNDKYGSMSGTS MASPHVAGVVALVKQYLKENFHEKSDEEVGYLVKALIMSTAKAHYDKEAQAYTSPRQQGA GLVDTASAVSTGLYVTGDDGYGSVTLGNVGDTFTFDVTIHNIGDQDKTLTYETNLGTDTV ENGEITLAPRQLSTTTGHTITVKANSSETITITVDASQFAELLSKEMPNGYYLEGFVRFL DPTDLAEVVSIPYVGFRGDFQNLAVVETPVYQLVSDGKDGFYFEVSDDHVVESGDATTSL LTNNAGSGYYKVLGTYSNDDGDFVLQLDENGQPYLAISPDGDGNQDYVLFKGVFLRNYTN ATAAVYAADDVNFENPLWESGDSSGIKNYYKKASVLYATRWDGKDQDGHDLADGKYKYVL TYYPEVIGADAQHLAFDVIIDRKEPIITTATYDENTLTFTPRKALDPDGSGVFKDSIFYY AENEKGEVEQVYLAPNANGSFTLPLDLADIEDFYYAVEDYAGNVAYAKVEDLINVGNDSG RVTVNLLNDETKGNSYVDYTFIIKDAKGDIVTDLHFFGDDLTTVDLPFGDYTVELALYDE EWAELAGPTSQKVSISETDSYKTVDFFVHTFSKAALVLDFDKDLPKGTDVTIVNKDGKVT SVPAARYVKTDYGKDVYVGDYTLALNLPEGYEIYEDPDFTVLYGKQNRVKFSVIDKTGLI SETNATADLEKEARYYNASLAKLLTYRDALTSAQTILSEKHTQAEVDDALANLQVAKAAL DGQETQYQALSDESDRYAGVQADPAYYNASASSRITYDTLYRSAKFILAKAQTTQEEVDT ALADLVAAREALDGQATDFTALRDLSAKSAVLKVTAAKYQNASETVKDAYDQALEEALAV LANEGATQGEVDAALANLKAAEKALDGQEIIEDTDVQKEESLIPEEVIKPETPPKVEPQV SENEKGGEVAALGVVTVHKEVKASTPAKPLASSKATDELPQTSSVTQNYLLALGFTLVTL TAGIWKRRKVSKD >gi|304426803|gb|AEEM01000011.1| GENE 250 240525 - 241610 1178 361 aa, chain - ## HITS:1 COG:SPy1369 KEGG:ns NR:ns ## COG: SPy1369 COG0513 # Protein_GI_number: 15675301 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 359 1 359 361 547 76.0 1e-155 MISQFPQVWQEQLANLKFSELTAIQKQIFEPISQGDNVLGVSPTGTGKTLAYLFPTLLNV TPKKSQQLLILAPNTELAGQIFEVTKTWAEPLNLTAQLFISGSSQKRQIERLKKGPEILI GTPGRVFELVKLKKIKMMNVDTIVLDEFDELLGDSQYHFVENIINRVPRDHQMVYMSATN KVDADALAENTLTIDLSDQKLEQIAHYYITVDKRDRLELLRKFSNIPEFRGLVFFNSLSD LGAAEERLQFNRVSAVSLASDINVKFRKVILEKFKNHDISLLLATDLVARGIDIENLEYV INFDLARDKEVYTHRAGRTGRMGKAGVVITFITHKEELKKLKKYAQVSEVYLKNQGLHLK K >gi|304426803|gb|AEEM01000011.1| GENE 251 241763 - 242383 809 206 aa, chain + ## HITS:1 COG:SP1208 KEGG:ns NR:ns ## COG: SP1208 COG0572 # Protein_GI_number: 15901071 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Streptococcus pneumoniae TIGR4 # 23 206 23 206 212 298 85.0 5e-81 MRKKPIIIGVTGGSGGGKTSVSKAILANFKDQKIAMIQHDSYYKDQSHLTFEERVSTNYD HPLAFDTDLMIEHINELIAGRPVDIPIYDYTQHTRSEKTYRQEPQDVFIVEGILVLEDKR LRDLMDIKLFVDTDDDIRIIRRIKRDMEERGRSLDSVIDQYTSVVKPMYHQFIEPTKRYA DIIIPEGASNVVAIDLINTKIATILE >gi|304426803|gb|AEEM01000011.1| GENE 252 242768 - 244330 1989 520 aa, chain + ## HITS:1 COG:lin2094 KEGG:ns NR:ns ## COG: lin2094 COG0119 # Protein_GI_number: 16801160 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Listeria innocua # 1 498 1 497 512 550 57.0 1e-156 MRKVEFLDTTLRDGEQTPGVNFSIKEKVAIAKQLEKWGIASIEAGFPAASPDSFEAVRQI SAAMTTTAVSGLARSVKSDIDACYEALKDAKYPQCHVFIATSPIHREYKLKKTKEEILDI IKEHVTYARSKFDVVEFSPEDATRTELDYLLQVVQTAVDAGATYINIPDTVGFTTPEEYG NIFKYLIENTKSDREIIFSPHCHDDLGMATANTLVAIKNGAGRVEGTVNGIGERAGNVAL EEIAVALNIREDYYQATSDIVLNETVNTSELISRFSGISIPKNKAVVGGNAFSHESGIHQ DGVLKNPLTYEIITPELVGVKHNSLPLGKLSGRHAFVEKLKELELAFEESEIATLFGKFK KLADKKHEITDADIRALVAGTEIENPEGFHFGDLKLTSNADDTVTAEVLMVNADGEEVEV IANGKGSVEAIYNAVDKFFNQTVRLLSYTMDAVTDGIDSQARVSVSIENVDTGTIFNASG IDFDVLKAGAIAYVNANAFVQKENAGEIGKAVSFRDVPTN >gi|304426803|gb|AEEM01000011.1| GENE 253 244381 - 245418 1139 345 aa, chain + ## HITS:1 COG:L0074 KEGG:ns NR:ns ## COG: L0074 COG0473 # Protein_GI_number: 15673200 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Lactococcus lactis # 1 319 1 318 320 450 70.0 1e-126 MTKKIVTLAGDGIGPEIMAAGLEVLEVVASKINFDYGIDAKPFGGAGIDASGHPLPKETL DAAKSADAILLAAIGGPKYDNAPVRPEQGLLAIRKELNLFANIRPVRIFDALKHLSPLKP ERIEGVDFVVVRELTGGIYFGEHQLQDESARDINDYSAQEIRRIIRKAFELARLRGKKVT SIDKQNVLATSKLWRKVAEEVALDFPDVTLEHQLVDSAAMIMITNPSRFDVVVTENLFGD ILSDESSVLPGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPVSMILSVAMMLRE SFGEVAGAELIENAVDKTFNQGILTRDLGGKASTAEMTAAIIANL >gi|304426803|gb|AEEM01000011.1| GENE 254 245415 - 245693 139 92 aa, chain + ## HITS:1 COG:SP1256 KEGG:ns NR:ns ## COG: SP1256 COG3326 # Protein_GI_number: 15901117 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 86 1 86 89 82 56.0 2e-16 MTLKELALLIFVLWNVLTFLTYGIDKKKAEHGRWRIPEKTLLLESILFGGIGAFLGGKIF HHKTLKWYFKACWYLGMVIDIAVLYWYIVIWK >gi|304426803|gb|AEEM01000011.1| GENE 255 245739 - 247127 1585 462 aa, chain + ## HITS:1 COG:L0075 KEGG:ns NR:ns ## COG: L0075 COG0065 # Protein_GI_number: 15673202 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Lactococcus lactis # 1 458 1 457 460 722 76.0 0 MSGKSIFDKLWERHVVTGEEGEPQLMYVDQHYIHEVTSPQAFQGLRDAGRKVRRPDLTFG TTDHNVPTVDIFNIRDLVSKNQIDTLARNVEEFGIDAATHGTERQGIVHMVGPETGRSQP GKFVVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQCIWQVKPKKMKVEFVGKPQKGVYS KDFILALIAQYGVDAGVGYAVEYCGEAIDALSMDERMTIANMSIEFGAKMGLMNPDQKTF DYVKGREAAPKGDKFEQAVEDWKTLVSDPDAEYDKVITIDVSGLAPMVTWGTNPEMGVEF GKPFPEIKDMNDERAYHYMDIKPGDKAEDIDLGYVFIGSCTNARLSDLELAAKIVKGKHI SPNLTAIVVPGSRPVKKEAERLGLDKIFMDAGFEWREPGCSMCLGMNPDHVPEGVHCAST SNRNFEGRQGFGARTHLCSPAMAAAAAIAGKFIDVRQLSEVQ >gi|304426803|gb|AEEM01000011.1| GENE 256 247140 - 247730 694 196 aa, chain + ## HITS:1 COG:L0076 KEGG:ns NR:ns ## COG: L0076 COG0066 # Protein_GI_number: 15673203 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Lactococcus lactis # 1 189 1 188 191 283 73.0 2e-76 MEKFTVYTGKSVPLMNDNIDTDQLIPKQFLKAVDKKGFGKNLLFEWRYLNDDYDENPDFI FNKPEYRDATILISGDNFGSGSSREHAAWALEDYGFRCVIAGSFSDIHYNNELKNGMLPI VQPLEVRQKLAALPAGEEITIDLPNQVIKSSAGEFPFEIDGEWKRKLVLGLDDIGITLQY ENLIAAYEENRPSYWQ >gi|304426803|gb|AEEM01000011.1| GENE 257 247882 - 248379 543 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 1 161 1 161 165 213 64 5e-54 MENTKKIENYQIMLAQAKALFANEKNLLSNLSNASALLKMTLPNSVFTGFYLFDGQELLL GPFQGGVSCVHIALGKGVCGEAAANQETIIVADVTKHANYISCDSAAMSEIVVPMVKNNQ LVGVLDLDSRLTDDYDAIDQEYLEKFVAVLLEKSYWNLDMFGVEK >gi|304426803|gb|AEEM01000011.1| GENE 258 248379 - 250058 1745 559 aa, chain + ## HITS:1 COG:SPy1364 KEGG:ns NR:ns ## COG: SPy1364 COG2812 # Protein_GI_number: 15675296 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Streptococcus pyogenes M1 GAS # 1 559 1 556 556 756 75.0 0 MYQALYRKYRSQTFDEMVGQTVISTTLKQAVSSGKISHAYLFSGPRGTGKTSAAKIFAKA MNCPNQVNGEPCNHCDICRDITNGSLEDVIEIDAASNNGVDEIREIRDKSTYAPSRATYK VYIIDEVHMLSTGAFNALLKTLEEPTENVVFILATTELHKIPATILSRVQRFEFKAIKLA AIREHLANILDKEEISYEEDALTLIARCAEGGMRDALSILDQALSLTPDNYVSLAIAEEI TGSISMTALDDFVANVLANQTSQALANLETIFDSGKSMSRFATDLLNYLRDLLVVQTGGE NTHTSQTFQENLATAEQNRIFTMIDLVTKALPEIKNGVQPKIYAEMLTIQLSEAGKEISA AQVPDGLSDELAKLKSEIKDLKEELSKIDSSAISQKRVSRKKSVTGFKFKVDRVKILTIM EETIVDSQKSREYLEALKGAWNEILDSISAQDRALLLGSEPVLANSENAILAFDAAFNAE QAMKRTDLNDMFGNIMSKAAGFSPNILAVPRKDFNSIRTEFAQNLKKQRKEPAQEEVQEE NFIPEGFDFLADKINKIED Prediction of potential genes in microbial genomes Time: Sun May 29 12:33:11 2011 Seq name: gi|304426606|gb|AEEM01000012.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00022, whole genome shotgun sequence Length of sequence - 208470 bp Number of predicted genes - 193, with homology - 192 Number of transcription units - 86, operones - 45 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 246 - 305 2.8 1 1 Tu 1 . + CDS 325 - 519 100 ## GALLO_0767 hypothetical protein + Term 626 - 676 6.4 2 2 Tu 1 . - CDS 500 - 1432 921 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 1574 - 1633 3.4 + Prom 1925 - 1984 6.0 3 3 Tu 1 . + CDS 2022 - 3212 1637 ## COG0192 S-adenosylmethionine synthetase + Term 3220 - 3254 4.4 4 4 Tu 1 . - CDS 3253 - 3819 570 ## COG1309 Transcriptional regulator - Prom 3941 - 4000 7.3 + Prom 3910 - 3969 5.4 5 5 Tu 1 . + CDS 3989 - 5113 792 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 5162 - 5221 6.9 6 6 Tu 1 1/0.444 + CDS 5343 - 6602 1727 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 6603 - 6636 3.1 + Prom 6607 - 6666 4.0 7 7 Op 1 3/0.167 + CDS 6687 - 7241 538 ## PROTEIN SUPPORTED gi|116628248|ref|YP_820867.1| GNAT family acetyltransferase 8 7 Op 2 2/0.222 + CDS 7234 - 8517 1487 ## COG4109 Predicted transcriptional regulator containing CBS domains + Prom 8531 - 8590 8.2 9 8 Op 1 2/0.222 + CDS 8635 - 9495 1000 ## COG0024 Methionine aminopeptidase 10 8 Op 2 . + CDS 9497 - 10429 475 ## COG1295 Predicted membrane protein - Term 10344 - 10391 4.4 11 9 Tu 1 . - CDS 10444 - 10869 371 ## COG2246 Predicted membrane protein - Prom 10957 - 11016 2.8 + Prom 10856 - 10915 8.5 12 10 Tu 1 . + CDS 11014 - 11523 510 ## COG4708 Predicted membrane protein + Term 11529 - 11569 3.5 + Prom 11525 - 11584 6.8 13 11 Op 1 2/0.222 + CDS 11628 - 13586 2175 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 14 11 Op 2 1/0.444 + CDS 13605 - 14624 1493 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 15 11 Op 3 9/0.056 + CDS 14642 - 16954 1968 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 16 11 Op 4 6/0.111 + CDS 17024 - 18925 1814 ## COG0296 1,4-alpha-glucan branching enzyme 17 11 Op 5 7/0.056 + CDS 18927 - 20069 1294 ## COG0448 ADP-glucose pyrophosphorylase 18 11 Op 6 17/0.000 + CDS 20059 - 21195 1062 ## COG0448 ADP-glucose pyrophosphorylase 19 11 Op 7 10/0.056 + CDS 21192 - 22622 1591 ## COG0297 Glycogen synthase 20 11 Op 8 . + CDS 22640 - 25036 2392 ## COG0058 Glucan phosphorylase + Term 25177 - 25216 5.4 + Prom 25251 - 25310 5.8 21 12 Op 1 40/0.000 + CDS 25339 - 25542 383 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 22 12 Op 2 2/0.222 + CDS 25581 - 26294 521 ## COG0356 F0F1-type ATP synthase, subunit a 23 12 Op 3 38/0.000 + CDS 26316 - 26813 795 ## COG0711 F0F1-type ATP synthase, subunit b 24 12 Op 4 41/0.000 + CDS 26813 - 27349 577 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 25 12 Op 5 42/0.000 + CDS 27365 - 28870 2217 ## COG0056 F0F1-type ATP synthase, alpha subunit 26 12 Op 6 42/0.000 + CDS 28885 - 29763 1262 ## COG0224 F0F1-type ATP synthase, gamma subunit 27 12 Op 7 42/0.000 + CDS 29830 - 31236 1935 ## COG0055 F0F1-type ATP synthase, beta subunit 28 12 Op 8 . + CDS 31249 - 31665 633 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 31675 - 31701 -0.6 29 12 Op 9 . + CDS 31730 - 31966 179 ## GALLO_0795 hypothetical protein 30 12 Op 10 . + CDS 32017 - 33303 1766 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 31 12 Op 11 . + CDS 33306 - 33494 199 ## GALLO_0797 hypothetical protein + Term 33507 - 33545 2.5 + Prom 33510 - 33569 4.6 32 13 Tu 1 . + CDS 33609 - 34475 799 ## GALLO_0798 conserved hypothetical secreted protein + Term 34680 - 34728 10.2 + Prom 34503 - 34562 3.0 33 14 Op 1 2/0.222 + CDS 34762 - 35805 1328 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 34 14 Op 2 1/0.444 + CDS 35841 - 36365 725 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 35 14 Op 3 . + CDS 36436 - 38841 3118 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit + Term 38882 - 38921 8.4 + Prom 38906 - 38965 5.3 36 15 Op 1 8/0.056 + CDS 38991 - 42239 3045 ## COG3857 ATP-dependent nuclease, subunit B 37 15 Op 2 . + CDS 42229 - 45861 2990 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) + Term 45909 - 45947 -0.8 + Prom 45916 - 45975 10.9 38 16 Tu 1 . + CDS 46002 - 49724 1490 ## OB3378 hypothetical protein + Term 49897 - 49942 9.8 - Term 49885 - 49930 11.4 39 17 Tu 1 . - CDS 49969 - 51114 1321 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 51140 - 51199 8.2 + Prom 51131 - 51190 6.2 40 18 Op 1 . + CDS 51321 - 52055 874 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family 41 18 Op 2 12/0.056 + CDS 52069 - 52437 307 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 42 18 Op 3 . + CDS 52394 - 52693 237 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 52715 - 52768 9.7 - Term 52698 - 52757 10.5 43 19 Tu 1 . - CDS 52771 - 52947 407 ## - Prom 53096 - 53155 7.8 + Prom 53043 - 53102 6.2 44 20 Tu 1 . + CDS 53135 - 54022 902 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase + Term 54029 - 54070 1.1 + Prom 54074 - 54133 6.5 45 21 Op 1 . + CDS 54161 - 55399 1401 ## COG2262 GTPases 46 21 Op 2 . + CDS 55392 - 56030 620 ## GALLO_0810 hypothetical protein 47 21 Op 3 4/0.167 + CDS 56085 - 56999 1041 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 48 21 Op 4 2/0.222 + CDS 56996 - 57754 788 ## COG0300 Short-chain dehydrogenases of various substrate specificities 49 21 Op 5 . + CDS 57796 - 60003 2446 ## COG0608 Single-stranded DNA-specific exonuclease + Term 60011 - 60050 6.0 + Prom 60082 - 60141 8.2 50 22 Tu 1 . + CDS 60170 - 61435 1254 ## GALLO_0814 hypothetical secreted protein + Term 61457 - 61501 4.0 + Prom 61533 - 61592 6.3 51 23 Tu 1 . + CDS 61634 - 61879 239 ## GALLO_0815 hypothetical protein + Term 61933 - 61979 7.8 - Term 61923 - 61965 6.1 52 24 Op 1 . - CDS 61970 - 63319 1316 ## GALLO_0816 hypothetical protein - Prom 63339 - 63398 6.5 - Term 63360 - 63395 0.1 53 24 Op 2 . - CDS 63414 - 64196 493 ## GALLO_0817 hypothetical protein - Prom 64233 - 64292 7.0 54 25 Op 1 . + CDS 64509 - 65489 933 ## COG3049 Penicillin V acylase and related amidases 55 25 Op 2 . + CDS 65506 - 66033 346 ## GALLO_0819 hypothetical protein + Term 66045 - 66098 11.6 + Prom 66094 - 66153 7.6 56 26 Op 1 45/0.000 + CDS 66204 - 66929 289 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 57 26 Op 2 3/0.167 + CDS 66931 - 68037 1157 ## COG0842 ABC-type multidrug transport system, permease component 58 26 Op 3 . + CDS 68079 - 68693 438 ## COG1309 Transcriptional regulator + Term 68711 - 68746 -0.5 + Prom 68763 - 68822 9.8 59 27 Tu 1 . + CDS 68861 - 69379 645 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Prom 69396 - 69455 8.2 60 28 Op 1 1/0.444 + CDS 69486 - 70430 986 ## COG1897 Homoserine trans-succinylase 61 28 Op 2 6/0.111 + CDS 70521 - 71195 814 ## COG3935 Putative primosome component and related proteins 62 28 Op 3 2/0.222 + CDS 71195 - 71845 191 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase + Term 71846 - 71876 1.2 63 29 Op 1 9/0.056 + CDS 71909 - 72595 867 ## COG2384 Predicted SAM-dependent methyltransferase 64 29 Op 2 . + CDS 72582 - 73370 901 ## COG0327 Uncharacterized conserved protein + Term 73378 - 73416 5.5 + Prom 73470 - 73529 7.5 65 30 Op 1 13/0.056 + CDS 73557 - 74426 1193 ## COG1209 dTDP-glucose pyrophosphorylase 66 30 Op 2 11/0.056 + CDS 74426 - 75019 718 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Term 75110 - 75146 -0.9 + Prom 75093 - 75152 2.6 67 31 Tu 1 . + CDS 75192 - 76241 1252 ## COG1088 dTDP-D-glucose 4,6-dehydratase + Term 76250 - 76299 5.1 + Prom 76292 - 76351 6.3 68 32 Tu 1 . + CDS 76379 - 76801 286 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Prom 76842 - 76901 4.5 69 33 Op 1 2/0.222 + CDS 76921 - 77403 546 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 77412 - 77471 1.6 70 33 Op 2 5/0.167 + CDS 77496 - 78683 1286 ## COG0628 Predicted permease 71 33 Op 3 . + CDS 78673 - 79908 1486 ## COG0457 FOG: TPR repeat 72 33 Op 4 . + CDS 79892 - 80068 135 ## gi|171779731|ref|ZP_02920687.1| hypothetical protein STRINF_01568 + Term 80080 - 80118 4.5 + Prom 80075 - 80134 6.0 73 34 Op 1 4/0.167 + CDS 80190 - 80492 374 ## COG0640 Predicted transcriptional regulators + Prom 80509 - 80568 3.2 74 34 Op 2 . + CDS 80592 - 81779 1623 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 81855 - 81915 3.0 + Prom 81986 - 82045 8.1 75 35 Op 1 3/0.167 + CDS 82170 - 83846 2263 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Prom 83848 - 83907 1.6 76 35 Op 2 . + CDS 83927 - 84646 924 ## COG3527 Alpha-acetolactate decarboxylase + Prom 85068 - 85127 8.6 77 36 Tu 1 . + CDS 85206 - 86609 1086 ## COG0531 Amino acid transporters + Term 86610 - 86669 8.7 - Term 86601 - 86652 2.1 78 37 Op 1 . - CDS 86660 - 88315 1602 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 88392 - 88451 3.0 79 37 Op 2 . - CDS 88459 - 89316 603 ## COG0583 Transcriptional regulator - Prom 89451 - 89510 8.2 + Prom 89415 - 89474 6.3 80 38 Op 1 16/0.000 + CDS 89499 - 90272 524 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 81 38 Op 2 . + CDS 90288 - 91841 1510 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 82 38 Op 3 . + CDS 91856 - 92692 913 ## COG1834 N-Dimethylarginine dimethylaminohydrolase 83 38 Op 4 . + CDS 92764 - 93849 871 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 84 38 Op 5 . + CDS 93827 - 94792 997 ## COG1052 Lactate dehydrogenase and related dehydrogenases 85 38 Op 6 . + CDS 94782 - 96407 1286 ## COG4187 Arginine degradation protein (predicted deacylase) + Term 96419 - 96466 1.6 + Prom 96416 - 96475 7.0 86 39 Op 1 9/0.056 + CDS 96725 - 97726 1399 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 87 39 Op 2 13/0.056 + CDS 97747 - 98616 1127 ## COG4120 ABC-type uncharacterized transport system, permease component 88 39 Op 3 . + CDS 98613 - 99371 184 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 99449 - 99494 4.1 + Prom 99454 - 99513 8.2 89 40 Op 1 . + CDS 99546 - 99818 261 ## GALLO_0853 hypothetical protein 90 40 Op 2 . + CDS 99825 - 100169 151 ## GALLO_0854 hypothetical protein 91 40 Op 3 . + CDS 100171 - 101703 1435 ## GALLO_1574 hypothetical protein 92 40 Op 4 . + CDS 101693 - 102202 308 ## GALLO_0542 hypothetical secreted protein 93 40 Op 5 . + CDS 102276 - 102794 501 ## GALLO_0857 hypothetical protein 94 40 Op 6 . + CDS 102812 - 103318 253 ## GALLO_0857 hypothetical protein + Prom 103380 - 103439 5.1 95 41 Tu 1 . + CDS 103545 - 105206 2348 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 105215 - 105255 -1.0 + Prom 105249 - 105308 6.4 96 42 Op 1 . + CDS 105363 - 106076 713 ## COG5549 Predicted Zn-dependent protease + Term 106093 - 106137 7.2 + Prom 106078 - 106137 4.4 97 42 Op 2 . + CDS 106168 - 108087 2039 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 108096 - 108165 16.1 + Prom 108162 - 108221 5.0 98 43 Op 1 . + CDS 108323 - 108769 352 ## GALLO_0863 putative transcriptional regulator, MarR family 99 43 Op 2 35/0.000 + CDS 108762 - 110513 213 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 100 43 Op 3 . + CDS 110513 - 112390 191 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 112401 - 112451 13.0 + Prom 112443 - 112502 6.2 101 44 Tu 1 . + CDS 112522 - 112938 213 ## GALLO_0866 hypothetical protein + Term 112947 - 112975 -1.0 + Prom 112955 - 113014 5.3 102 45 Op 1 28/0.000 + CDS 113077 - 114042 1058 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 103 45 Op 2 24/0.000 + CDS 114074 - 115078 1322 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 104 45 Op 3 30/0.000 + CDS 115093 - 116487 1470 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 105 45 Op 4 . + CDS 116632 - 118377 749 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 118385 - 118426 7.5 + Prom 118385 - 118444 7.3 106 46 Op 1 11/0.056 + CDS 118548 - 119504 921 ## COG4606 ABC-type enterochelin transport system, permease component 107 46 Op 2 10/0.056 + CDS 119497 - 120462 431 ## COG4605 ABC-type enterochelin transport system, permease component 108 46 Op 3 5/0.167 + CDS 120459 - 121214 225 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 109 46 Op 4 . + CDS 121268 - 122296 1151 ## COG4607 ABC-type enterochelin transport system, periplasmic component + Term 122354 - 122405 2.0 110 47 Tu 1 . - CDS 122379 - 123062 633 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 123299 - 123358 7.8 + Prom 123259 - 123318 10.5 111 48 Op 1 . + CDS 123349 - 124764 912 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 124780 - 124839 5.0 112 48 Op 2 . + CDS 124863 - 125852 1122 ## COG0095 Lipoate-protein ligase A + Term 125902 - 125944 4.2 - Term 125895 - 125925 2.0 113 49 Op 1 . - CDS 125946 - 126563 826 ## GALLO_0878 conserved serine rich protein 114 49 Op 2 . - CDS 126621 - 126929 398 ## GALLO_0879 hypothetical protein - Prom 126974 - 127033 6.5 - Term 127013 - 127070 7.2 115 50 Tu 1 . - CDS 127086 - 127955 1030 ## COG0583 Transcriptional regulator - Prom 128011 - 128070 6.2 + Prom 127983 - 128042 6.8 116 51 Op 1 . + CDS 128166 - 129026 778 ## GALLO_0881 hypothetical protein 117 51 Op 2 . + CDS 129019 - 130188 884 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 118 51 Op 3 . + CDS 130189 - 130665 611 ## GALLO_0883 conserved hypothetical secreted protein 119 51 Op 4 . + CDS 130665 - 131015 182 ## GALLO_0884 hypothetical protein 120 51 Op 5 . + CDS 131080 - 131595 643 ## COG3467 Predicted flavin-nucleotide-binding protein + Term 131598 - 131645 6.3 + Prom 131644 - 131703 3.6 121 52 Op 1 . + CDS 131727 - 133091 1491 ## COG0534 Na+-driven multidrug efflux pump + Prom 133094 - 133153 7.5 122 52 Op 2 1/0.444 + CDS 133187 - 133867 867 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis + Term 133876 - 133907 2.2 + Prom 133926 - 133985 7.0 123 53 Op 1 . + CDS 134009 - 135172 1171 ## COG2814 Arabinose efflux permease + Prom 135198 - 135257 7.5 124 53 Op 2 . + CDS 135281 - 136258 1429 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 136302 - 136350 10.1 - Term 136295 - 136332 8.0 125 54 Tu 1 . - CDS 136340 - 138793 2747 ## GALLO_0890 conserved hypothetical secreted protein - Prom 138886 - 138945 7.5 - Term 139000 - 139055 7.0 126 55 Op 1 . - CDS 139065 - 140249 1441 ## COG0477 Permeases of the major facilitator superfamily 127 55 Op 2 . - CDS 140280 - 141770 2008 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 141796 - 141855 8.6 + Prom 141752 - 141811 8.1 128 56 Tu 1 . + CDS 141884 - 142762 579 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain + Term 142788 - 142827 3.0 + Prom 142800 - 142859 7.1 129 57 Op 1 1/0.444 + CDS 142992 - 143606 681 ## COG0431 Predicted flavoprotein 130 57 Op 2 . + CDS 143624 - 144400 853 ## COG0431 Predicted flavoprotein + Term 144404 - 144442 3.2 - Term 144392 - 144429 3.0 131 58 Tu 1 . - CDS 144431 - 145213 683 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 145247 - 145306 4.6 132 59 Tu 1 . - CDS 145343 - 145603 457 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 145770 - 145829 6.5 + Prom 145647 - 145706 5.3 133 60 Op 1 3/0.167 + CDS 145828 - 146073 164 ## COG0607 Rhodanese-related sulfurtransferase 134 60 Op 2 3/0.167 + CDS 146070 - 147725 1894 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 135 60 Op 3 . + CDS 147718 - 148017 313 ## COG0607 Rhodanese-related sulfurtransferase + Term 148036 - 148066 1.1 136 61 Op 1 . + CDS 148075 - 148725 780 ## COG1418 Predicted HD superfamily hydrolase 137 61 Op 2 . + CDS 148786 - 149253 691 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 149257 - 149301 6.2 + Prom 149269 - 149328 6.8 138 62 Tu 1 . + CDS 149488 - 149946 454 ## GALLO_0903 hypothetical protein + Term 149962 - 149991 1.4 + Prom 150022 - 150081 4.0 139 63 Op 1 . + CDS 150108 - 151295 915 ## GALLO_0904 hypothetical protein 140 63 Op 2 2/0.222 + CDS 151298 - 152215 800 ## COG0583 Transcriptional regulator + Term 152225 - 152271 6.7 + Prom 152247 - 152306 7.7 141 64 Op 1 . + CDS 152367 - 153131 770 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 142 64 Op 2 . + CDS 153154 - 154014 1193 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 143 64 Op 3 . + CDS 154054 - 155238 814 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 144 64 Op 4 . + CDS 155240 - 155626 357 ## GALLO_0908 hypothetical protein 145 64 Op 5 . + CDS 155645 - 156229 747 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases + Term 156272 - 156302 0.0 + Prom 156246 - 156305 8.0 146 65 Op 1 2/0.222 + CDS 156327 - 156719 462 ## COG0789 Predicted transcriptional regulators 147 65 Op 2 2/0.222 + CDS 156731 - 157576 1003 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Prom 157593 - 157652 7.7 148 66 Op 1 1/0.444 + CDS 157679 - 158002 560 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 149 66 Op 2 . + CDS 158030 - 158455 422 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Term 158521 - 158558 3.0 + Prom 158519 - 158578 1.9 150 67 Tu 1 . + CDS 158598 - 159467 535 ## GALLO_0914 hypothetical protein + Prom 159496 - 159555 5.7 151 68 Tu 1 . + CDS 159588 - 160088 360 ## COG0727 Predicted Fe-S-cluster oxidoreductase + Term 160105 - 160143 3.8 + Prom 160173 - 160232 9.6 152 69 Op 1 8/0.056 + CDS 160349 - 161560 938 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 153 69 Op 2 2/0.222 + CDS 161566 - 163044 1020 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 154 69 Op 3 8/0.056 + CDS 163046 - 163348 358 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 155 69 Op 4 . + CDS 163352 - 163663 398 ## COG1447 Phosphotransferase system cellobiose-specific component IIA + Term 163672 - 163718 8.1 + Prom 163665 - 163724 5.9 156 70 Op 1 . + CDS 163755 - 165605 916 ## GALLO_0920 putative transcription antiterminator 157 70 Op 2 . + CDS 165619 - 166350 663 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 166392 - 166451 7.9 - Term 166388 - 166427 5.1 158 71 Op 1 . - CDS 166431 - 167102 471 ## GALLO_0922 putative transcription regulator, Crp family 159 71 Op 2 . - CDS 167177 - 168049 646 ## COG0583 Transcriptional regulator - Prom 168089 - 168148 9.6 + Prom 168027 - 168086 6.2 160 72 Tu 1 . + CDS 168150 - 169175 1123 ## COG2855 Predicted membrane protein + Term 169183 - 169233 6.3 + Prom 169223 - 169282 6.5 161 73 Tu 1 . + CDS 169380 - 170756 1834 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 170796 - 170830 1.5 - Term 170776 - 170828 8.2 162 74 Tu 1 . - CDS 170859 - 172013 937 ## COG4292 Predicted membrane protein - Prom 172117 - 172176 6.2 + Prom 172005 - 172064 3.6 163 75 Op 1 . + CDS 172135 - 173934 1712 ## COG0322 Nuclease subunit of the excinuclease complex 164 75 Op 2 . + CDS 173921 - 174292 455 ## COG3603 Uncharacterized conserved protein + Prom 174338 - 174397 5.4 165 76 Tu 1 . + CDS 174418 - 176148 703 ## GALLO_0929 hypothetical protein + Term 176157 - 176192 1.0 + Prom 176217 - 176276 7.2 166 77 Tu 1 . + CDS 176306 - 176908 740 ## COG0778 Nitroreductase + Term 177021 - 177058 4.1 + Prom 176928 - 176987 4.0 167 78 Op 1 1/0.444 + CDS 177069 - 178475 2289 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 178492 - 178536 8.6 + Prom 178480 - 178539 8.7 168 78 Op 2 . + CDS 178564 - 179148 719 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 + Term 179173 - 179228 6.2 - Term 178965 - 178995 -0.3 169 79 Tu 1 . - CDS 179227 - 181017 2269 ## GALLO_0933 putative tannase (serine rich protein) - Prom 181172 - 181231 5.4 + Prom 180987 - 181046 6.1 170 80 Tu 1 . + CDS 181140 - 181811 691 ## GALLO_0934 putative regulatory protein + Term 181822 - 181870 8.1 - Term 181817 - 181849 3.3 171 81 Tu 1 . - CDS 181875 - 183248 1708 ## COG0486 Predicted GTPase - Prom 183296 - 183355 6.5 + Prom 183407 - 183466 6.1 172 82 Tu 1 2/0.222 + CDS 183514 - 184188 953 ## COG0120 Ribose 5-phosphate isomerase + Prom 184215 - 184274 4.4 173 83 Op 1 4/0.167 + CDS 184352 - 185563 1681 ## COG1015 Phosphopentomutase 174 83 Op 2 . + CDS 185573 - 186385 1144 ## COG0005 Purine nucleoside phosphorylase 175 83 Op 3 . + CDS 186436 - 187140 742 ## COG0518 GMP synthase - Glutamine amidotransferase domain 176 83 Op 4 . + CDS 187124 - 188413 1017 ## COG0038 Chloride channel protein EriC 177 83 Op 5 . + CDS 188370 - 189077 979 ## COG0813 Purine-nucleoside phosphorylase 178 83 Op 6 . + CDS 189077 - 189853 593 ## GALLO_0942 hypothetical protein + Term 189856 - 189903 13.2 - Term 189851 - 189884 5.1 179 84 Tu 1 . - CDS 189888 - 190745 894 ## COG0583 Transcriptional regulator - Prom 190990 - 191049 8.9 + Prom 190900 - 190959 7.2 180 85 Op 1 2/0.222 + CDS 191091 - 192572 1703 ## COG1316 Transcriptional regulator 181 85 Op 2 2/0.222 + CDS 192573 - 193304 759 ## COG4464 Capsular polysaccharide biosynthesis protein 182 85 Op 3 5/0.167 + CDS 193313 - 194002 907 ## COG3944 Capsular polysaccharide biosynthesis protein 183 85 Op 4 5/0.167 + CDS 194017 - 194757 832 ## COG0489 ATPases involved in chromosome partitioning 184 85 Op 5 12/0.056 + CDS 194796 - 196172 979 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 185 85 Op 6 . + CDS 196205 - 197380 1266 ## COG0438 Glycosyltransferase 186 85 Op 7 . + CDS 197381 - 198841 1266 ## COG0240 Glycerol-3-phosphate dehydrogenase 187 85 Op 8 . + CDS 198852 - 199670 498 ## COG3475 LPS biosynthesis protein 188 85 Op 9 . + CDS 199672 - 200640 366 ## LSA1578 putative teichoic acid/polysaccharide biosynthesis protein 189 85 Op 10 2/0.222 + CDS 200637 - 201782 572 ## COG3754 Lipopolysaccharide biosynthesis protein 190 85 Op 11 . + CDS 201772 - 204312 955 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 191 85 Op 12 . + CDS 204323 - 205513 431 ## gi|68643233|emb|CAI33515.1| oligosaccharide repeat unit polymerase Wzy 192 85 Op 13 . + CDS 205510 - 206940 344 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 206983 - 207017 5.5 + Prom 207126 - 207185 6.9 193 86 Tu 1 . + CDS 207239 - 208450 1326 ## GALLO_0962 hypothetical protein Predicted protein(s) >gi|304426606|gb|AEEM01000012.1| GENE 1 325 - 519 100 64 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0767 NR:ns ## KEGG: GALLO_0767 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 64 15 78 78 103 100.0 2e-21 MTKSRFIFVALMCAFETYFFNECLFEGDYLFAFFWGILLFRDLKRTYKVDKFIHTLTSTT KKKD >gi|304426606|gb|AEEM01000012.1| GENE 2 500 - 1432 921 310 aa, chain - ## HITS:1 COG:SPy1362_2 KEGG:ns NR:ns ## COG: SPy1362_2 COG0340 # Protein_GI_number: 15675294 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Streptococcus pyogenes M1 GAS # 75 310 2 238 240 326 69.0 4e-89 MKTYEKLYDYLKTQDDYVSGEKLAQDFELSRTAIWKAIKTLEGKGVQIHSVKKRGYKIIS GDLLLPQQIATNLNIAVTLNEKSESTQLDAKNNIDTDKQPHLYLAPSQEMAKGRFGRRFF ASKQGGIYMSLHLKPNVPFEQVKPYTLMVASSIVKAISRLTGIETEIKWVNDIYLNGKKI AGILTEAISSVETGLITDVIIGVGLNFHITDFPDDIAQKAGTLFSEQPTITRNQLITEIW NLFFTIPQKDLVKVYKEKSLVLNKQVTFIENDILFSGVAEEITDHGHLLVKLDNGQEKLL RSGEISLSSW >gi|304426606|gb|AEEM01000012.1| GENE 3 2022 - 3212 1637 396 aa, chain + ## HITS:1 COG:SP0762 KEGG:ns NR:ns ## COG: SP0762 COG0192 # Protein_GI_number: 15900656 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 396 1 396 396 697 90.0 0 MSERKLFTSESVSEGHPDKIADQISDAILDAVLEQDPDAHVAAETAVYTGSVHVFGEIST TAYVDINRIVRDTIAEIGYTNAEYGFAAESVGVHPSLVEQSPDIAQGVNEALEVRGNADQ DPLDLIGAGDQGLMFGFAIDETPELMPLPISLSHKLVKKLADLRKSGEISYLRPDAKSQV TVEYDENDKPVRVDTVVISTQHDPEATNDQIRQDVIEKVIKAVIPEKYLDDKTKFFINPT GRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSASYAARYIAKNIVA AGFATKAEVQLAYAIGVAQPVSVRVDTFGTNTVAESKLEAAVREVFDLRPAGIIQMLDLK RPIYRQTAAYGHMGRTDIDLPWEKLDKVEALKEAVK >gi|304426606|gb|AEEM01000012.1| GENE 4 3253 - 3819 570 188 aa, chain - ## HITS:1 COG:CAC0724 KEGG:ns NR:ns ## COG: CAC0724 COG1309 # Protein_GI_number: 15894011 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 11 186 12 185 185 77 29.0 1e-14 MNGKKEQILVSKSKIIEGTFRLLKLYTFDELTLNEILDEANISKRTFYRYFSNKQDILNY YYDDFITNYRSLESEILHQSSLNGVLGVTLDYFYQNRHHLRLLIKNQKFYLLLEKFNRAA VRIYQSIDAPWHIKAKTPLELTDSLLFIVGGYSNIISSWLTEENPRNPQEIAEHINNIFI NVSRNLEL >gi|304426606|gb|AEEM01000012.1| GENE 5 3989 - 5113 792 374 aa, chain + ## HITS:1 COG:CAC3432 KEGG:ns NR:ns ## COG: CAC3432 COG0596 # Protein_GI_number: 15896673 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 9 371 10 368 371 231 37.0 2e-60 MIETITGIKQFDFQILRFTGELRKRYPEVSQDLKVMGEAISDFETWYAWWYSRATFYEDN HLIEVAMTYYRASLFYLSFSDYRKSEAYKSFRRCFEMYYQPYHLNYFAIPYGKGKLPAIF MPKKGADRTLIVIGGFDSFAEELVAWFLPLQNEINANITLFDGPGQGSVPFQKIYFEANY EKVVTTVLDYFKLETADAIGISWGGYFVLRAAAFEKRLERCVCFDIFYSALDTLKLQTTT LEYFFLKQALFFRQKYLINSILKWRANNDFSLKWMLQHGTDITGEKTYFDFIENISQHSL QGYANKVTQDCLLLAGSEDMYVPKERLGELTKELVNAKSVTSKLFDKETGGVLHCQIDNI LPAIKEIISFLQQD >gi|304426606|gb|AEEM01000012.1| GENE 6 5343 - 6602 1727 419 aa, chain + ## HITS:1 COG:SPy1358 KEGG:ns NR:ns ## COG: SPy1358 COG0766 # Protein_GI_number: 15675291 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Streptococcus pyogenes M1 GAS # 1 419 1 419 419 653 83.0 0 MRKIVINGGKPLKGEVAISGAKNSVVALIPAAILADDIVILDGVPAISDVDSLIEIMEIM GAKVKREEDTLEIDPRGIKNQPMPYGKINSLRASYYFYGSLLSRFGEATVGLPGGCDLGP RPIDLHLKAFEAMGATISYEGEAMRLATNGESIHGAHIYMDTVSVGATINTMLAATKANG RTIIENAAREPEIIDVATLLNNMGAHIRGAGTDVITIEGVDYLHGTRHQVIPDRIEAGTY IAMAAAMGEGVRITNVLYEHLESYIAKLEEMGVRMTVEEDSIFVEKQSVLKAVSVKTSPY PGFATDLQQPITPLLLTAEGRGTILDTIYEKRTNHVAELVRMGADISIVGGRIAYQGPNK LTGAPVKASDLRAGAALVIAGLMAEGQTEITNVEFILRGYSNIIEKLTALGADIKLIED >gi|304426606|gb|AEEM01000012.1| GENE 7 6687 - 7241 538 184 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628248|ref|YP_820867.1| GNAT family acetyltransferase [Streptococcus thermophilus LMD-9] # 1 178 1 178 181 211 55 2e-53 MDIWTRLGRYAFFETERMYLRPFAYKDSQDFFEICSNPDNLRFIFPSRASHHESDYLMVH YFMKEPLGVWAIEDKKSHKMIGCIRFEKIDLNRSFAEIGYFLNQQFWGQGLMTESLKTLC FLSFQEFGFKELHVIAHEENLASQRVAQKSGFKLKQRFKGSDRYTHKMRDYVDYQISKGD YRYE >gi|304426606|gb|AEEM01000012.1| GENE 8 7234 - 8517 1487 427 aa, chain + ## HITS:1 COG:SPy1355 KEGG:ns NR:ns ## COG: SPy1355 COG4109 # Protein_GI_number: 15675288 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing CBS domains # Organism: Streptococcus pyogenes M1 GAS # 1 427 1 427 427 566 71.0 1e-161 MSKHQKILEYLENLPVGKRVSVRSISNHLKVSDGTAYRAIKEAENRGIVETRPRSGTVRI EKKPAVRIERLTYSEIARISDSEVLAGKAGLSREFSKFSIGAMTQENILRYLVKGGLLIV GDRENIQLLALEKHNAILVTGGFPVSDEVIRVADELGIPVMVTHYDTFTVATMINHALSN IRIKTDLTTVEQVYQTKEDYGFLQEGDTIREFNAMIKQTANVRFPVVNSKNVVIGVVSML DVVGKENHLDIKSIMSRNLIVAKPQASLANISQKMIFEDLNMLPVVAEDLTLLGVITRRQ AVENLPNLQHSNLYTYSDQILSNLQYEDGVYKFVVEPAMIDNAGNFAQGVLTEFIKDISV RVLTKKHQKNIIIEQLMLYFVQAVQIDDCLVIRPRVITEKRRSSVIDFEILLEEQIVAKA LVTTKIN >gi|304426606|gb|AEEM01000012.1| GENE 9 8635 - 9495 1000 286 aa, chain + ## HITS:1 COG:SPy1354 KEGG:ns NR:ns ## COG: SPy1354 COG0024 # Protein_GI_number: 15675287 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 286 286 531 88.0 1e-151 MITLKSAREIEAMDRAGDFLASVHIGLRELIKPGLDMWEVEEYVRRRCKEANVLPLQIGV DGSIMDYPYATCCGLNDEVAHAFPRHYILKEGDLLKVDMVLSEPLDKSVVDVSKLNFDNV AQVKKYTESYSGGLADSCWAYAVGEVSDEVKNLMDVTKECLYIGIEKAVVGNRIGDIGAA IQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPHYGKAGRGLRLREGMVLTIEPMINTGTW EIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY >gi|304426606|gb|AEEM01000012.1| GENE 10 9497 - 10429 475 310 aa, chain + ## HITS:1 COG:SPy1353 KEGG:ns NR:ns ## COG: SPy1353 COG1295 # Protein_GI_number: 15675286 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 299 1 299 321 375 67.0 1e-104 MNRKQLIDKLVSRLEWQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYL NIDISVLLSFMEKNLPTNLYPSVSAITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKA INKAYGVSQHRDFVIGRLIGVLASLLILFLLTFVLIFSTFSKAALQIISAHYDLSDTVAT VVLNLSQPVTVLTIVFGLMLLYFILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYILR TFERMVDIKTFGSVVIFVLMLWFIFLAHILILGAIFNATYQELRQGKMESRRGDILSILT HRKQDKDTKK >gi|304426606|gb|AEEM01000012.1| GENE 11 10444 - 10869 371 141 aa, chain - ## HITS:1 COG:SP1011 KEGG:ns NR:ns ## COG: SP1011 COG2246 # Protein_GI_number: 15900883 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 138 5 142 143 90 49.0 8e-19 MKKLLSSEVFKYLFFGVLATLVYMGTRLVIFALTQSATTSAVIANVIAIVFAFFTNDYFV FNQVRTGWFNRFVKFFVARLSTLALDLILAYLLVTKFPHIIGQFVNDNISLVNMIETVFS QVLIIVLNYVFSKLLIFKDKK >gi|304426606|gb|AEEM01000012.1| GENE 12 11014 - 11523 510 169 aa, chain + ## HITS:1 COG:SPy0749 KEGG:ns NR:ns ## COG: SPy0749 COG4708 # Protein_GI_number: 15674799 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 167 1 166 166 191 65.0 7e-49 MKHFTIRDFAQVALVAALYIVLTVTPPLNAISYGAYQFRVSEMLVFMAFYNRKYIVGLTL GCMIANLYSFGLIDVFVGGSQTFVFLTLGVILFDRYKEQYLFNGLFNKAFFYFSLLFSAS MFTIALELYYVGGSPFLMTWFTSAVGELASLLIGAIIMDRLGKRIDLTV >gi|304426606|gb|AEEM01000012.1| GENE 13 11628 - 13586 2175 652 aa, chain + ## HITS:1 COG:SPy0751 KEGG:ns NR:ns ## COG: SPy0751 COG0272 # Protein_GI_number: 15674800 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Streptococcus pyogenes M1 GAS # 1 652 1 652 652 940 73.0 0 MKKRIQELVDELNQYRKEYYTEDQPTVSDSEYDKLYRELVELEKAHPELILPNSPTQEVG GLVLDGFEKYQHETPLYSLQDAFSREELEEFDRRVKAEFPNASYMAELKIDGLSISLVYV DGVLQVGATRGDGSVGENITENVKRIKDIPHKLAQPLNITVRGEAYLPKASFDKINEERR DSGQTEFANPRNAAAGTLRQLNTVVVAKRNLATFLYQEVASTSMTTQNDVLEELSRYGFS VNPRRITTSSMADIWKFIQEVAAERDNLPYDIDGIVIKVNSLAMQEELGFTVKAPRWAIA YKFPAEEKEAEILSVDWTVGRTGVVTPTANLSPVQLAGTTVSRATLHNVDYIAEKDIRIG DTVIVYKAGDIIPAVLHVVDSKRDKQVPMPIPESCPSCGSELIHYEDEVALRCINPLCPS QIQERLTHFASRDAMNITGLGPSIVKKLFKAELVHDVADIYQLTVEDLLSLDGFKEKSAE KLYNAIQVSKENSADKLLFGLGIRHVGAKASRQLLEVFETIDQLVAADADSIASIDGLGT VIANSLRSYFAKKEATELLHELKNAGVNFAYLGKKVSKDAQLAGLTVVLTGKLERLTRNE AKEKLQDLGAKVTNSVSKKTDIVVAGTDAGSKLTKAQALGIDVRDEAWLESL >gi|304426606|gb|AEEM01000012.1| GENE 14 13605 - 14624 1493 339 aa, chain + ## HITS:1 COG:SPy0752 KEGG:ns NR:ns ## COG: SPy0752 COG1597 # Protein_GI_number: 15674801 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Streptococcus pyogenes M1 GAS # 3 338 2 337 340 525 78.0 1e-149 MAKKQKRARLIYNPTSGQEIMKKNVAEVLDVLEGFGYETSAFQTTPEPNSARDEAKRAAE AGFDLVIAAGGDGTINEVVNGIAPLSKRPQMAIIPMGTTNDFARALKIPRGNPVEAAKII GKNQTIQMDIGQAREDTYFINIAAAGSFTELTYSVPSQLKTMFGYLAYLAKGVELLPGIR TVPVRIKHEKGTFEGDVSMIFAAITNSVGGFEQIAPDAKLDDGKFTLILVKTANLIEILR LIRLVLDGGKHIGDKRIEYIKTDFLEIEPLSDKKMMINLDGEYGGDAPIKLRNLKNHITF FANTDEISDDALVWNQEDLALEAIAQKFTQEVDELNSEE >gi|304426606|gb|AEEM01000012.1| GENE 15 14642 - 16954 1968 770 aa, chain + ## HITS:1 COG:SP1118 KEGG:ns NR:ns ## COG: SP1118 COG1523 # Protein_GI_number: 15900985 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 7 747 8 739 759 759 53.0 0 MKNTVIVHYHSQHGNYFDYSLWKWIDFHEGTDSQFSGFDSFGLVGNLTIDSPFFLEHIYV IVKNHNWSIKTRDFRIQRNSGVPKTEVWIVEGDDTLYYSHQAAITSHYYSHRDSHAFDMA MNYQYFDYQWGFQGWLGYQYQKEKTEFRLWAPTAAKVDLIFYQTTDDKSSIDYIVPMERG DIINLDNHLYNTHGVWFATIEHDLNYQAYAYRVYYRDKTFQDTRDPYSIATTANGRRSVI LAPEHLNPKGFSVKQGKEAYWRLDNPNQAVITELHIRDFSKSSTSGVAESYRGKFLGACQ SGTHNSYGDETGFDYLKKLGISHVQLQPIFDHHQTFDVDGNYAYNWGYDPENFNVPEASF STAPHKPENRILELKQLIQAYHDAGIAVIMDVVYNHTYSSYNSAFQLTVPDYFYRMNADG SFQDGSGCGNETASEKEMFRKYMIDSVLYWVNEYNIDGFRFDLMGLHDIETMNAIRQALD DIDPRLMMYGEGWDMGTGLLPEQKAKKDNAYQMPNIGFFNDNVRDGIKGAEVYGQFKHGF VSGAATEGIIAKGVLGSDELSSYLTPNQVINYVEAHDNYNLNDLMWELHPDDSQETHTRR IEMASAMNVLMQGVAFMQIGQEFLRTKLYPTGNNGQLTSSDKQLAMNSYNAPDRVNQIDW DNVTEHHATIAFMRGIIHLKRTNPAFSYQSYKEIRDHVYVHVANDYDGIVVFDILGEKNY RIIFNENEKNLENYMTDVSKYAIIITNIKRLHYKNDKLEALSVSIFEIEK >gi|304426606|gb|AEEM01000012.1| GENE 16 17024 - 18925 1814 633 aa, chain + ## HITS:1 COG:SP1121 KEGG:ns NR:ns ## COG: SP1121 COG0296 # Protein_GI_number: 15900988 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 624 1 624 642 1009 75.0 0 MDTKEALRTFGTGENFHAQHYFGFHKETRNGTEGYSFRVWAPNAQSVHLIGDFTQWRENP LAMERNEAGVWEIFTDLPKENQLYKYLVKRSTGQEVEKLDPFAIYFEKRPGTAAVLTDFP EKKWKDALWLGRRKRFGFRNRPVNIYEVHAGSWKQHDDGRPYQFKELTEELIPYLVKMNY THVEFMPLMAHPLGMSWGYQLMGYFAFEHSYGTPEDFQNFVETCHLNNIGVIVDWVPGHF TINDDALAYFDGTPTFEYEDEDRAHNRGWGALNFDLGKNQVQSFLISSAKFWIDYYHLDG IRVDAVSNMLYRDYDIGPWTPNKDGGNRNYEGYYFLQKLNAVLKSFYPDIMMIAEESTSD TKITGPIEYDALGFDYKWNMGWMNDILKFYEEDPIYRKYDFNLVTFSFMYAFSENFILPF SHDEVVHGKKSLMHKMWGDRYNQFAGLRNLYTYQICHPGKKLLFMGSEFGQFLEWKYDYQ LEWVNLEDDLNKKMQDFTSQLNAFYKEHNVLWQIDDSYDGIEIIDADNTDQTVLSFIRKN KDGDMLICVFNMVPVERKDFTIGVPVAGIYEEVWNTEMEEFGGVWKEHNLQARTQDRLWK NYHHTLSFTLPALGASIWKIKRRLAKQIPKKGK >gi|304426606|gb|AEEM01000012.1| GENE 17 18927 - 20069 1294 380 aa, chain + ## HITS:1 COG:SP1122 KEGG:ns NR:ns ## COG: SP1122 COG0448 # Protein_GI_number: 15900989 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 380 1 379 380 620 80.0 1e-177 MKNEMLALILAGGQGTRLGKLTQNIAKPAVQFGGRYRIIDFALSNCANSGVDNVGIITQY QPLVLNSHVGNGSNWGIDGINSGATILQPYSATEGNRWFEGTSHAIYQNIDYIDSIDPEY VLILSGDHIYKMDYDDMLRTHKDNLASLTVAVIDVPLKEASRFGIMNTDSNDRIVEFEEK PEHPKSTKASMGIYIFNWQRLREVLVNAEKNNVDMSDFGKNVIPAYLEAGDRVYTYNFDG YWKDVGTIESLWEANMEYIGEDNELHSRDRSWKIYSKNLIAPPNFITEEASVKNSLVVDG CFVSGKVNHSILSTNVQVKKDAEITDSFIMSGAIIGEGAKIKRAIVGENAVIGDGVEIDG TGKEVQVVGYNEVVGVPNED >gi|304426606|gb|AEEM01000012.1| GENE 18 20059 - 21195 1062 378 aa, chain + ## HITS:1 COG:SP1123 KEGG:ns NR:ns ## COG: SP1123 COG0448 # Protein_GI_number: 15900990 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 376 1 377 379 481 63.0 1e-135 MKIDKYTAILGNAVGYHDMSTLTEKRPLANLPFDGKYRLIDFQLSNLANAGIRSIYAIFR GQNIRSVFDHVRSGREWGLNTLLSHYFLGFYNNSNDSEFADKDYYEQVLTYLKRSGSDQT VYMNCDILCNIDLEQVIHLHDVNNDGPITVVYKKMPKESISEANEILEIDETDHVVGRAD VNDSLDLQKMSADIYVIDTPWLIAKMEEEAQKDQPRKLRYLLRELIVSNNALAFEYTGYL SNICSVKSYYDANMDMLNTQKFYSLLYSNQKVYTKVKNEEATYFAEESNIKNSQFASGSI IKGDVEYSIVSRNCHVASGSRVIGSILFPKVTIGEGAVIENAIVDKNVVIAPGVVIRGSK ENPIVIKKGLEVTEDVIQ >gi|304426606|gb|AEEM01000012.1| GENE 19 21192 - 22622 1591 476 aa, chain + ## HITS:1 COG:SP1124 KEGG:ns NR:ns ## COG: SP1124 COG0297 # Protein_GI_number: 15900991 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 475 1 475 477 742 73.0 0 MKILFVAAEGAPFAKTGGLGDVIGALPKSLVKNGNEVAVVLPYYDMIDAKFGDQIEDVLY YYTEVGWRHQYVGVKRIVKENVTFYFLDNQYYFYRGHIYGDWDDGERFAFFQLAAIELME KVDFIPDVVHVHDYHTAMIPFLLKEKYHWINAYKDIKTVLTIHNLEFQGQYDSGMLGDLF GVGYERYADGTLRWNDCLNWLKAGILYSDRVTTVSPSYAQEIMTPAFGKGLDQILRMESG KLIGITNGIDTDLYNPETDPHIPEHFSVKDLSGKAKDKRALQERVGLPVRDDVPLIGIVS RLTDQKGFDLVVNELNNILHFDLQVVLLGTGYTEFENSFAWFGSAFPDKMSANITFDIEL AQQIYAASDIFLMPSAFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVSPYNQYEKTGTGFG FQDFSGYWLTRTVEKAVDLYYSNKEDWSMLQKNAMTTDFSWDTASKAYEDLYEQLD >gi|304426606|gb|AEEM01000012.1| GENE 20 22640 - 25036 2392 798 aa, chain + ## HITS:1 COG:L99884 KEGG:ns NR:ns ## COG: L99884 COG0058 # Protein_GI_number: 15672682 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Lactococcus lactis # 1 797 1 796 800 907 56.0 0 MKLTKEEFIRDFKDTLHEEQLIKVPDATPAELFTSLAQTVRKYYTPLWLERNRKISENHE KVAYYFSIEFLPGRMLETNLLNLGILDIVKEAFAELNVDFDAVKNAEHDMALGNGGLGRL AAAFMDSLATTGYPGFGNGLRYKYGLFKQRIVDGYQVELPDSWFGSIGNVWETRKDHDTV EVKLFGDVYLQADKDGKLSPVYNNAQILRAVPYDVPQLGYQNDIVNNLRLWDVEIPEEYE LDYPTIADRRSVQDITSILYPDDSSYEGKQLRLVQEYFMTSAGLQTIIKSYLKQGLPLEK IHEKVSVHINDTHPAVAPAEFMRLLVDEYRLEWDVAWDVTTKTMSYTNHTILAEALEKWD AELFKKVLPRVYQIILEIDNRFVSDMASDGVAPQIIENTRIVKDGLIHMANLAIIGGYSV NGVAKLHTELLKEDTLRDFYNLYPEKFNNKTNGIVQRRWTQIADQPLSKTIDKWIGSGWR SDIHELRKLNDLVDNPEVLNDFYHVKQEAKARLAAYIKETTGIEVSTDAIFDVQVKRLHA YKRQLLNVLNIIKQYWDLKDNPDKDIVPHVYIFGAKAAPGYHFAKSVIKVINELANLINN DSSLNGKLKVVFLENYNVSLAELIIPAANVSEQISLASKEASGTSNMKFMMTGAITLATL DGANIEIKDEVGSDNIVIFGMDKDDVYRHYERHDYYSRSIYENNPIIRRVVDSFINGTIP NIQGEGTEIYESLITHNDEYFLLEDFTAYVEAQEKIDQLYRNQEQWMRMSLINIANSDKF TSDDTITQYAKEIWQLKN >gi|304426606|gb|AEEM01000012.1| GENE 21 25339 - 25542 383 67 aa, chain + ## HITS:1 COG:SP1514 KEGG:ns NR:ns ## COG: SP1514 COG0636 # Protein_GI_number: 15901361 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Streptococcus pneumoniae TIGR4 # 2 66 1 65 66 60 55.0 1e-09 MLNLKILALGIAVLGVSLGEGILVANIAKSAARQPEMYSKLQTLMIMGVAFIEGTFFVLL ASTFFVG >gi|304426606|gb|AEEM01000012.1| GENE 22 25581 - 26294 521 237 aa, chain + ## HITS:1 COG:SPy0755 KEGG:ns NR:ns ## COG: SPy0755 COG0356 # Protein_GI_number: 15674803 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Streptococcus pyogenes M1 GAS # 1 237 1 238 238 224 50.0 8e-59 METSVNPTAQFFGIEFDLTILAMSLLTVLVAFVLIFWFSRNMQLKPKGKQNVLEWVYEFV QGIIRPNLGRYTSNYGLLFFGLFFFLLIANNIGLLTKLEVGDYNLWSSPTSNAAYNFGLA LLIAVVVHVEGIRKNGIKEYLKEYLSPTPVMLPMNILEEFTNVISLTLRLYGNIFAGEIV LSLLVQFAHYNIVAVPFAFILNMLWTGFSIFISAIQAYVFVMLSSTYVGKKVNHEEE >gi|304426606|gb|AEEM01000012.1| GENE 23 26316 - 26813 795 165 aa, chain + ## HITS:1 COG:SP1512 KEGG:ns NR:ns ## COG: SP1512 COG0711 # Protein_GI_number: 15901359 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Streptococcus pneumoniae TIGR4 # 10 165 9 164 164 147 59.0 1e-35 MSTLINSTSLGNIIIVTGSFLLLLVLIKIFAWEQLTGVFKAREEKISNDIDGAEAAREKA EALAAKRQEELAGARTEATQIIDDAKETGKNQEAKIVAEAREEASRLKAKANQDIEQSKA EALSSVKSDVADLTVLLAEKIMTTNLDKEAQSNLIDSYLDKLGDA >gi|304426606|gb|AEEM01000012.1| GENE 24 26813 - 27349 577 178 aa, chain + ## HITS:1 COG:SPy0757 KEGG:ns NR:ns ## COG: SPy0757 COG0712 # Protein_GI_number: 15674805 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Streptococcus pyogenes M1 GAS # 1 178 1 178 178 177 59.0 9e-45 MDKKTQALVEQYAKSLVEIAIEKDSLAELQSETEALLSVFEETNLANFLSSLVVSRDEKV KLVRLLQESSSVYMNNFLEVILQNEREAFLKDILEGVQKDFVIATNQHDIVVTTAVALTD EQKERILALVAEKFGVKAGKLVENIDESILGGFIINVNNKVIDTSIRRQLQTFKMNLK >gi|304426606|gb|AEEM01000012.1| GENE 25 27365 - 28870 2217 501 aa, chain + ## HITS:1 COG:SPy0758 KEGG:ns NR:ns ## COG: SPy0758 COG0056 # Protein_GI_number: 15674806 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 501 1 501 502 928 95.0 0 MAINAQEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMSGELLEFSNGAF GMAQNLESNDVGIIILGDFSTIREGDEVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGD IKTTATRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELIIGDRQTGKTSVAI DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKYGALDYTIVVTASASQPSPLLYIAPY AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER SAKVSDALGGGSITALPFIETQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELEAFTQFGSDLDAATQAKLNRGRRTVEVL KQPVHKPLPVEKQVVILYALTHGFLDDVPVNDILAFEEALYDYFDAHYESIFETIRTTKD LPEESVLDAAIKAFKDQSEFK >gi|304426606|gb|AEEM01000012.1| GENE 26 28885 - 29763 1262 292 aa, chain + ## HITS:1 COG:SPy0759 KEGG:ns NR:ns ## COG: SPy0759 COG0224 # Protein_GI_number: 15674807 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Streptococcus pyogenes M1 GAS # 1 292 1 291 291 447 82.0 1e-126 MAGSLSEIKGKIISTQKTSHITGAMQMVSAAKLTKSEQAAQDFQIYASKIRQITTDLLKS ELINGSKNPMLAARPVKKTGYIVITSDKGLVGGYNSKILKAMMDLIQEYHAEDDNYAIIA IGGIGADFFKARGMNVVFELRGLEDQPSFEQVGNIISKSVEMYKNELFDELYVCYNHHVN SLTSQVRVQQMLPIAELDADEAAEEGTTGFELEPSRELILEQLLPQYTESLIYGAIVDAK TAEHAAGMTAMQTATDNAKNIIADLTTQYNRARQATITNEIIEIVAGANALE >gi|304426606|gb|AEEM01000012.1| GENE 27 29830 - 31236 1935 468 aa, chain + ## HITS:1 COG:SPy0760 KEGG:ns NR:ns ## COG: SPy0760 COG0055 # Protein_GI_number: 15674808 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 468 1 468 468 855 94.0 0 MSSGKIAQVVGPVVDVAFAAGEKLPEINNALIVYKDGDKSQKIVLEVALELGDGLVRTIA MESTDGLTRGLEVFDTGRAISVPVGKETLGRVFNVLGDTIDLDEPFAEDAPREPIHKKAP AFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKKGSVTSI QAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEH YEVATEVQRVLQRYRELQDIIAILGMDELSDEEKTLVGRARRIQFFLSQNFNVAEQFTGM PGSYVPVAETVRGFKEILEGKYDDLPEDAFRNVGPIEDVVEKAKKMNY >gi|304426606|gb|AEEM01000012.1| GENE 28 31249 - 31665 633 138 aa, chain + ## HITS:1 COG:SPy0761 KEGG:ns NR:ns ## COG: SPy0761 COG0355 # Protein_GI_number: 15674809 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Streptococcus pyogenes M1 GAS # 1 138 1 138 138 201 81.0 4e-52 MTYMTVQVVTPDGIRYDHHANFISVKTPDGEMGILPEHINLIAPLTVHEMKIRRIDDDNH VDWVAINGGIIEVKDNLVTIVADSAERERDIDVSRAERAKIRAERKLEQAQSTHDIDEVR RAQVALRRALNRISVGNK >gi|304426606|gb|AEEM01000012.1| GENE 29 31730 - 31966 179 78 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0795 NR:ns ## KEGG: GALLO_0795 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 78 1 78 78 112 100.0 4e-24 MEILNSTVTILCHLMFIAMTHQLLRQLFDWSKIIKNSAENVGRLKVFILFLSIAIGYLVS HFFLEIITMSQTLFLSFQ >gi|304426606|gb|AEEM01000012.1| GENE 30 32017 - 33303 1766 428 aa, chain + ## HITS:1 COG:SPy0763 KEGG:ns NR:ns ## COG: SPy0763 COG0766 # Protein_GI_number: 15674811 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Streptococcus pyogenes M1 GAS # 5 427 1 422 423 681 85.0 0 MEFILDKIIIEGGNTRLQGEVVIEGAKNAVLPLLAATILPEEGKTILTNVPILSDVFTMN NVVRGLNIQVDFDEANNKIEVDASGDILDIAPYEYVSKMRASIVVLGPILARNGHAKVSM PGGCTIGSRPIDLHLKGLEAMGAKITQSGGDITATVDGKLKGTTIYMDFPSVGATQNLMM AATLADGVTIIENVAREPEIVDLAMLLNKMGANVRGAGTETLTITGVDSLHGAEHDVVQD RIEAGTFMVAAAMTSGNVLIKDAIWEHNRPLISKLIEMGVTVVDEEGGIRVIADTSTLRP VTVKTLPHPGFPTDMQAQFTALMAVVDGESTMIETVFENRFQHLEEMRRMGLQSEILRDT AMIHGGKELQGAPVMSTDLRASAALILTGMVAKGTTTVGKLVHLDRGYYKFHEKLAKLGA NIKRVSEA >gi|304426606|gb|AEEM01000012.1| GENE 31 33306 - 33494 199 62 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0797 NR:ns ## KEGG: GALLO_0797 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 62 1 62 62 94 100.0 2e-18 MTSGWKYVTKQLVLILVIALLCCLFLAIGLMIGYGIIGEGKNPFAILSLDKWQSIIGKFT GN >gi|304426606|gb|AEEM01000012.1| GENE 32 33609 - 34475 799 288 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0798 NR:ns ## KEGG: GALLO_0798 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 288 1 288 288 452 98.0 1e-126 MAKKSKLSKQTKSLLSLVILLVGIGTGWVTISDSNDPLNQVVSLITGDSSSEITSNQSSS DSATPTQALAETVLTDSVKEQLGANIEWNGAGAYIINDNQTSLNAKVSSQPYANNKTKTV QGQTVPTVANALLSKSTRQYKSREETGNGSTSWTPAGWHQVQDLSGTYSHAVDRGHLLGY ALVGGLKGFDASTSNPDNVATQTAWANEANSESSTGQNYYESLVRKALDQNKRVRYRVTL IYDGDNLLASGTHLEAKSSDGSLEFNVFVPNVQSGLTFDYYSGQVSVN >gi|304426606|gb|AEEM01000012.1| GENE 33 34762 - 35805 1328 347 aa, chain + ## HITS:1 COG:SPy0768 KEGG:ns NR:ns ## COG: SPy0768 COG0016 # Protein_GI_number: 15674814 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 346 27 372 373 633 89.0 0 MDLQAQLEELKSSTQAKLAEMRGNNAKELQELRVQVLGKKGSLTELLKGLKDLSKEMRPV VGKQVNEVRDVLTKAFEEQAKIVEAAKIQAQLESESLDVTLPGRQVNLGNRHVLTQTSEE IEDIFLGMGFQVVDGYEVESDYYNFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQA RTLDKHDFSKGPLKMISPGRVFRRDTDDATHSHQFHQIEGLVVGENISMGDLKGTLEMII KKMFGEDRKIRLRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPRVL EMSGVDSEKYSGFAFGLGQERIAMLRYGINDIRGFYQGDVRFSEQFK >gi|304426606|gb|AEEM01000012.1| GENE 34 35841 - 36365 725 174 aa, chain + ## HITS:1 COG:SP0580 KEGG:ns NR:ns ## COG: SP0580 COG0454 # Protein_GI_number: 15900490 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 6 173 2 169 169 197 58.0 7e-51 MSEIKVEKVTLDKLSILQELSIQTFRETFAFDNTEEELQQFFDDSYTLEQLEKEVTDPES DVRFVLVDGREVGFMKVNWGAAQTEHELENAFEIQRIYILNECQGLGLGKKLFELALDMA KEGGFDWAWLGVWEHNVKAQGFYRKYGFEKFSEHSFKVGDKVDTDWLLRKALKE >gi|304426606|gb|AEEM01000012.1| GENE 35 36436 - 38841 3118 801 aa, chain + ## HITS:1 COG:SPy0769_2 KEGG:ns NR:ns ## COG: SPy0769_2 COG0072 # Protein_GI_number: 15674815 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Streptococcus pyogenes M1 GAS # 145 801 1 657 657 986 76.0 0 MLVSYKWLKELVDVDVTTHELSEKMSTTGIEVEGVSTSSEGLTKLVVGHVVSCEDVPETH LHLCQVDTGDEELRQIVCGAPNVTAGINVIVAVPGARIADNYKIKKGKIRGMESLGMICS LQELGLPDSIIPKEFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRGV AHEVAAIYGKEVHFPEKELKEVSKAAKDVINVAIESDKVLTYKARVVENVTVKPSPQWLQ NLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEDNKIVARNAHAGEKLVTLDGEE RELIAEDLVITVADKPVALAGVMGGQATEIDDNSKNVVLEAAVFDGTSIRKTSGRLNLRS ESSSRFEKGINYATVAEALDFAAAMLTELADGDVLAGRVEAGSVPTEDVEVSTTLDYVNV RLGTELTYADIEDVFAKLGFGLSGNADKFTVSVPRRRWDIAIQADLVEEIARIYGYDNLP TTLPEAAGTAGELTATQKLRRKMRSIAEGAGLTEIVSYALTTPEKATEFTLQPSNLTELM WPMSVERSVLRQNVVSGMLDTVAYNVARKNSNLAIYEIGKVFEQKGNPKEELPNEVSTFA FAISGLVAEKDFQTKATPVDFFYAKGIVEAIFAKLDLTVDYVAEKGLASMHPGRTASIYL DGQLVGFVGQVHPQTAKNYNVPETYVAELNLDIIEAALHADKAFVEITKFPAVSRDIALL LPAATTHKEILAAIESAKVKRLTDIKLFDVYAGANIAEGMKSMAYSLTFQNPNDNLTDEE VAKYMDKITKVLVDQLGAEVR >gi|304426606|gb|AEEM01000012.1| GENE 36 38991 - 42239 3045 1082 aa, chain + ## HITS:1 COG:SPy0776 KEGG:ns NR:ns ## COG: SPy0776 COG3857 # Protein_GI_number: 15674821 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Streptococcus pyogenes M1 GAS # 1 1076 1 1068 1071 1124 55.0 0 MKLLYTDIQYDMTEILVGEAVAQADAGKRVFYIAPNSLSFEKERAVLELLPDEASFAITV TRFAQMARYFVLNEAQAQVKESIDDNGLAMIFYRALSHFSDTDLKVFGRLKQDTNFIKQL VDLYKELKTANMTVLDLTELHSAEKQEDLVKIFLAVNDILLANQYDNQSKIAYFAKQVEA GHLDATLENVSLVIDGFTRFSAEEEYLVSLLEEKCAQVIIGTYSSQKAYRAAFSTGNVYQ ASLDFLRGLAAKFHAQPQYVESSQKSHEAFSKLSKLFEAKHDFTSSDVTLTADDKKHYAI WDVINQKEEVEHVAKAIRHKLYQGYRYKDILVLLGDVDSYRLQIGKIFDKYDIPYYFGKA ESMSDHPLVHFIDSLERVKRYRFRTEDVVNLLKTGLYGNFKQEDLDLFEQYLIYADIKGQ SKFAKEFTIVYKGKKHLAFVNRMREQIMTPLLALFKAQKQRGSSLLEKLMTFLHAIHLPD NLEGMVATFSENEQEKHEQVWRTFTGILTQFQTIFGQEKLSLDDCLSLIRSGMLAAQYRV VPATVDVVSVKSYDLVEPHTNKFVFALGMTQAHFPKIAQNSSLISDEERAQINESTDDNQ RFDIVSRENIKKNHFAALSLFNSATEELVLSLPQIANEAEDTESSYLTELASFGVPVLAK GRNRLSTDAEDIGNYKALLSRVIEVNRLAIEEERELSKEEQTFWSVAVRYLRKKLAAESI ELPLIKDNMQTKTVSADVIEARFPSDELISLSSSAVTTFYNNQYKYFLQYVLGLQEVETI HPDARNHGTYLHRVFELVMKDDSNHSFDSKLDKAIQTTNLEDDFKFVYEEDEESRYSLTV LEDIARSTATILRDDAQIQVESEEETFELMIANSVRIRGIIDRVDRLSDGSLGIVDYKSS RNTFDIQKFYNGLSPQLVTYVQALRDKKGLSESEHIFGAMYLHMQEPKVDLSSVATTEKI LENLAKELTYRGLFLEDEKAYLANGRYHLNDSLYSQEELEILLAYNQNLYLKAAEQIKKG HFLINPYSEDGKSVQGDQLKAITRFEADRHMPYARKWYKLPRKDRRQGFLSLMQEEEETD DL >gi|304426606|gb|AEEM01000012.1| GENE 37 42229 - 45861 2990 1210 aa, chain + ## HITS:1 COG:SPy0777 KEGG:ns NR:ns ## COG: SPy0777 COG1074 # Protein_GI_number: 15674822 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Streptococcus pyogenes M1 GAS # 3 1210 4 1210 1210 1408 60.0 0 MIFKPFLTSEDISSLQIQEVQSSKKQKRTPEQIEAIYSYGNNILVSASAGSGKTFVMVER IIDKILRGVTIDQLFISTFTVKAAGELKERIEKKISQALQETTDNDLKNYLNEQLLGLQT ADIGTMDAFTQKLVNQYGYTLGISPTFRIMTDKSEQDILKNEVFFDLFSDYMTGNDAELF RQLVRNFSGNRKDSTAFRGIVYKIYDFSQATDNPQKWLAEVFLKGAKTYTDFSAIPDQEV TDFLTCLHDTADQLQDVTDLEDYKQKTAKGTPTANYKKHLNIIEQLREWAQHFETLYGRD GLGRLATDVAKLLPAGPAVTVAGTKYPVFKPLQGRLTGLKHLETIFKYQPESLPLLELLQ AFMQDFSEQYLQAKIQENAFEFSDIAHFAIQILEENADIRELYQNKYHEVMVDEYQDNNH TQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFKDFQEHPDRGKLILLKENFR SQSEVLDATNSIFTHLMDEAVGEILYDDTHQLVAGSPAQKESHPENKTQVLIYDIDNNSD LPSDAEEGQINPNEVKLVAKEIIRLHNEEHVAFEDITLLVSSRTRNDGILQTFEHYGIPL VTDGGEQNYLKSVEVMVMLDTLRALDNPLNDYALVALMRSPMFSFNEDELARLALQTTED DHRANLYQKLEHALAGKGSHNELMTITLHDKLADFMACFAAWREFAKWHALYDLIWKIYN DRFYYDYVGNLPRAEQRQANLYALALRANNFERTGFKGLSRFIRMIDKVLESENDLADVE VALPKNAVNLMTIHKSKGLEFKYVFILNIDKKFSIQDLMSPLILSRQNGAGIKYLADMKE ELETDVFPTVKVSMDTLPYQLNKRELRLATLSEQMRLFYVAMTRAEKKLYLVGKASSEKL VDKYSGKSENNHLPVAERENFMTFQDWVLAIYEAYSKENLPFAVDFVTDEDLTDDKIGKI EATSVITPDDLTDNRQSENITEALDRLEAVEKLNAKYHAAINLPSLRTPSQVKKLYEPVM DTDGVDVMTKAYQAQPTFELPDFSKKAKIEATAIGSAMHELMQRIPLSKQVTIADITAAL AQVSAEDEVKARIRLENVLAFFENSELGQLIQQHTDKVYREAPFAMLKEDPDSKEKFVVR GIVDGYLVLDDRIVLFDYKTDKYKNSVEIKERYQGQMALYAEALSKSYDRKNVDKYLVLL GGEQLEVVKL >gi|304426606|gb|AEEM01000012.1| GENE 38 46002 - 49724 1490 1240 aa, chain + ## HITS:1 COG:no KEGG:OB3378 NR:ns ## KEGG: OB3378 # Name: not_defined # Def: hypothetical protein # Organism: O.iheyensis # Pathway: not_defined # 1 1232 1 1226 1232 412 27.0 1e-113 MSSITDIKRRIIELGPAEFQEFCDTFLSKKGCGNVHGYGMKAGTGKTTKGNPDTYFRKEN GKYAFVAYTMQEQGIYSKIKEDVEKCLDISKTGIETADIEEIICCHTSSNLNAGDDKKLH DFCEEQGVHLTIYGVDEIANQVYSFYPSLATYLGLSIDTNQILSLDDFVIQCDANGMSAP LRTNFRFRISEKEKIINALLENNVVVVTGKAGVGKTRLALEAIKEFSNSNGYKLLCVKNN NLSLYEDLVSATEQRGKYLFFIDDANELAELSHVLEYVTKGYLGYEVRIIATVRDYAKGN VISEIKNYVNPYITMIEPLKDDEIISFLDENLGIKNLNYIEKIVKISKGNPRMAYMAGKL ALEKETLSAIKDVSQLYDAYYRKYVDNALGEDNDLCLTAGILAVINTVILNDLSALQGIF KYYGISNEVFTRKVRQLSQLEVVEIHLNQVASLSDQCLANYMLYYVFFQRKILPLGEVLE IGYRYFRNSVIRSVNTILNFFESDATKEYCREEILKVWEKLKISNDDCYEKFVEDFHLFK PEEGFLLVKERIDKLGHEQFNPLSIDFRENQYIMNDRLLNLLLGYNYSDNINYVIELLIE YCSKSSKNLILGSDWLKNNYGIDIYSYRYDYYSQKKVGEFLLQAVEEGSKVAMVLGLQWS KYVLNFSFHPLVSESENKVRFYHMELEYSKGVREYRQYCWKILLLLAERNEFKDFVLQYI EDYVRNISCEIDSKIVDAEINDIYKILDLLNCDRIYFIKTLEMLQRNLKSINIEIDKKWC DKQQGPLWNLYSLFRFDVLLNNLDYKEYETLREKKIKDYADRISKSEVYNFVYYMNEILK DIPDGFELYHINLGIEIFLTNLREEYLEEFWNSYISNGSNFSIYPRQILKSMNKLNNFKN LYSKINSKEFPQKNEWLFIFFDILPQEVINKKWLDKFIKFLKYDSDKEITLSSQRCLRIL DKFLKCEPKIYPIACSIIYEKRCYSNFMVKIYFEHLFHNQIYSPKELLELFKDDIELLRN IYFHILSIEKIVDYTGEFLLEFIKNDDIWLKEYSKFFWNNQSQNEYMRNNILWKSENYIK YYDYLLKNVPNEIMYDWQISSRFGEMLQYSGNDELVKNRQKEWIIHQVKLNAHSNSIYVI FSMISELNEDIRRSAFEEFLSNNENYEAFKQLPLTPNCYNGTDSLVPAYQRQIVFLESLY PLVRDTRFLKHKLSIKESVEKLKKLIEQEEVEVIYRHLYM >gi|304426606|gb|AEEM01000012.1| GENE 39 49969 - 51114 1321 381 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 4 380 11 373 374 204 32.0 3e-52 MANSKFQLVGSLLRPADLREYKTAIEHRDDIVYPFYDAFDGYQETETADIKKVIAEEKAN GIDIVTDGEYSKSMWHLDFVWGLKGIERYIADHGYTFQDHDGGQFETRKDIGIRITEPLS GKNHHFLDIFKLVKQEAGDTATKLTIWGPAHAYTELAIFDGLAGENQVYKTNEELKAGLI NAYKEFLTEYKEAGGEIIQFDDCLWELFDESNPASFFAEGNGGLADLADEFIAINNEVAD YGHELGLKVWTHNCRGNYESRSAAGGTYEAIATKFLKDQHYDRFFLEWDSEVSGDLKALE SLKDKDAEVVLGLLSSKTTDLDDEERALKLLEEASNIIPKERLFLSHQCGFASCDSGNEL AIPQQWAKIKQGQEIAAKFWN >gi|304426606|gb|AEEM01000012.1| GENE 40 51321 - 52055 874 244 aa, chain + ## HITS:1 COG:FN0428 KEGG:ns NR:ns ## COG: FN0428 COG1387 # Protein_GI_number: 19703770 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Fusobacterium nucleatum # 3 240 4 245 258 152 37.0 4e-37 MRDNHLHTHFSYDSDARFEDYLEHYDGDIVTTEHYDLSNPYTKQDDIPDYDAYSKEIAEL NAKYGNRIKRGIEIGYYEPREADITAFLANKDYDLKLLSVHHNGINDYLDDEVADMDKNA IIQEYLDKLEHAIGRVEADVLAHFDYGFRLFEVSVAELQAYEEQLRRIFQKMIDFDLAFE LNSKSMYLYHHEDLYRYALGLVRELGGHKYSIGSDGHKLEHFRLAFDKIQALLDECDIKE WEIL >gi|304426606|gb|AEEM01000012.1| GENE 41 52069 - 52437 307 122 aa, chain + ## HITS:1 COG:SP0666 KEGG:ns NR:ns ## COG: SP0666 COG0596 # Protein_GI_number: 15900567 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 1 122 1 120 205 102 41.0 2e-22 MKIIFLHGLGQDETSWDEVIKALPNHDCLSVKLFERDVFPTDFKVLEDKVLSILESIEED FILVGLSLGGMLALDMIQFNLANLKGIVVSGGQYKMKGNLAFYMQYLLFACTPARVFEKQ GG >gi|304426606|gb|AEEM01000012.1| GENE 42 52394 - 52693 237 99 aa, chain + ## HITS:1 COG:SP0666 KEGG:ns NR:ns ## COG: SP0666 COG0596 # Protein_GI_number: 15900567 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 15 95 121 201 205 65 40.0 2e-11 MLAPQLGYLKNKVVDKHAMKSFYGGLSQFNLAKVLTEVELPVQLICGQNDKANLPAAKAM HKLMTNSQLNIIPDSGHVLNTECPDDFANIIKNFLNRIM >gi|304426606|gb|AEEM01000012.1| GENE 43 52771 - 52947 407 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKKFAFAKGLATGVVATAATVAGAVFAIKKNIIDPEEEKAAFIQENRKKAARKRVSH >gi|304426606|gb|AEEM01000012.1| GENE 44 53135 - 54022 902 295 aa, chain + ## HITS:1 COG:SPy0921 KEGG:ns NR:ns ## COG: SPy0921 COG0324 # Protein_GI_number: 15674941 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Streptococcus pyogenes M1 GAS # 4 294 3 293 299 384 66.0 1e-106 MSEKIKLIAVVGPTAVGKTALGIELAQQFNGEIISGDSQQVYRHLDIGTAKATPEEQAAA PHHLIDVRDVDANYSVYDFVVEASQAITEIASRGKVPIIVGGTGLYLQSLLEGYHLGGEV DQEKVLAYRKTLEQLSDEVLFGKITELGKEISEINRRRAIRALELAKFGQNLENKETNYE ALLIGLNDDRQVLYDRINHRVDLMLEKGILDEAKWLYDNHRNAQAARAIGYKELFPYFTG DASLEDCVEKLKQNTRRFAKRQLTWFRNRMAVNFYNVSEVDFKETVIQDVNEFLK >gi|304426606|gb|AEEM01000012.1| GENE 45 54161 - 55399 1401 412 aa, chain + ## HITS:1 COG:SPy0922 KEGG:ns NR:ns ## COG: SPy0922 COG2262 # Protein_GI_number: 15674942 # Func_class: R General function prediction only # Function: GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 412 1 412 412 620 79.0 1e-177 MIETSKRQERVILLGVELPETENFEMSMEELASLAKTAGAEVVSSYRQKREKYDSKSLIG SGKLAEIKAIVEADEIDTVIVNDRLTPRQNVNLEVELGVKVIDRMQLILDIFAMRARSHE GKLQVHLAQLKYMLPRLVGQGVMLSRQAGGIGSRGPGESQLELNRRSIRHQISDIERQLK VVEKNRETGREKRTESQVFKIGLIGYTNAGKSTIMNVLTNDKQYEADELFATLDATTKQI YLQNQFQVTLTDTVGFIQNLPTELVAAFKSTLEESRNVDLLLHVIDASDPNHAEHEKVVL NLLKELDMLDIPRLAVYNKMDVAEHLVATAFPNVRISARDKDARTLLRRLIINEIREIFE PFSIRVHQSQAYKLYELNKIALLDHYDFAQEYETITGYINPKNKWRLEEFYD >gi|304426606|gb|AEEM01000012.1| GENE 46 55392 - 56030 620 212 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0810 NR:ns ## KEGG: GALLO_0810 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 212 1 212 212 370 98.0 1e-101 MTDYISLALKYGGFTSLDKVYLQNTLEQLTDEQKLSFITPPPSVINAYFAEMYQKQSPEA ATDYYFELSKELHLLNANPSFDEYKPFIRLNLSGKSYGFTYENDKEVARVFSEKNEALAA GVLFELAQVFPQYKVYVEEGHIKMSKMDFDEEVLEDLTPQESLLSHVSKLKGNVVKLQSF NRDELVELLAHYKGQVYYTFDQREFIAYVKVQ >gi|304426606|gb|AEEM01000012.1| GENE 47 56085 - 56999 1041 304 aa, chain + ## HITS:1 COG:SPy0924 KEGG:ns NR:ns ## COG: SPy0924 COG1234 # Protein_GI_number: 15674944 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Streptococcus pyogenes M1 GAS # 1 302 6 307 309 520 81.0 1e-147 MGTGAGQPSKSRNVSSLVLKLLDEINEVWMFDCGEGTQRQILETTIKPRKVKRIFITHLH GDHIFGLPGFLASRAFQANEEQTDLDVYGPIGIRSYILNSLRLSGARLPYRIHFHEFDEN SLGKVMETDKFVVYAEKLDHTIFCIGYRVMQKDLEGTLDAEALKAAGVPFGPLFGKIKSG QDVILEDGTKIIAKDYISAPKKGKIITILGDTRKTDASVRLGLGADILVHESTYGKGDEK IARKHGHSTNMQAAQIAKEASAKMLLLNHISARFLGRECKQVENDAKTVFENTHLVKDLE EISL >gi|304426606|gb|AEEM01000012.1| GENE 48 56996 - 57754 788 252 aa, chain + ## HITS:1 COG:SPy0925 KEGG:ns NR:ns ## COG: SPy0925 COG0300 # Protein_GI_number: 15674945 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Streptococcus pyogenes M1 GAS # 2 252 4 254 254 340 64.0 1e-93 MRIIAITGATGGIAQEIIKRIPKDDYVIALGRDLKKLKTHYGNRPNTACFALDMSSDVAI AETVEKIYAIHGRIDIFINNAGYGGFSDFDTYTTAQIRDMFDVNTFATMTFSRLVGQKMK EAGEGHIINIASIAGLIASAKSSVYSATKFAVIGFSNALRLELADSNVYVTTVNPGPIAT KFFDKADPSGDYLKSVGRFVLQPEYVAKRTVAIFGKNKRELNMPWSLAAAHKAYTLFPRI ADFLARKVFNYK >gi|304426606|gb|AEEM01000012.1| GENE 49 57796 - 60003 2446 735 aa, chain + ## HITS:1 COG:SPy0926_1 KEGG:ns NR:ns ## COG: SPy0926_1 COG0608 # Protein_GI_number: 15674946 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 579 1 579 580 776 68.0 0 MITSKYNWKNIEKEPDNGFFELTKKEKLTELASQILYSRGVDTAEKLTQFLSTDLSQLHD PYLLHDMDKAVERIRQAIENYEQILVYGDYDADGMTSASIMKEALEILGAEAQVYLPNRF TDGYGPNESVYKYFIEQQNVSLIITVDNGVAGHEAIAYAQSQGVDVIVTDHHGLPAELPE AFAIVHPEHPEADYPFKYLAGCGVAFKVACALLESIPTEMLDLVAIGTIADMVSLTDENR IMVKVGLEILKQTERIGLIELMKVSDVDMGDVNEETVGFKIAPQLNALGRLDDPNPAVEL LTGFDDEEAHNIAKMINAKNEERKEIVQKIFEEAMSMVDLEKPVQVLAKEGWHPGVLGIV AGRILEQIAQPVIVLNIEDGLAKGSARSIEAINIFHALDEHRGLFEAFGGHAGAAGMTLV TENLDKLSQVLCDYIAENDIDLSQKKELVIDEVLELSEIDLDTVHSLEKLAPFGMDNPKP VFEIKDFVVKQARTMGQNGAHLKLKIAQGTTAIDLVAFNQGHLAQEFQQAQNLCLATTLS INKWNGQTTVQLMLEDARVEGVQLIDIRSKTASLPERVPVLAEDSTANEVVVLDIPDKAE ELKSLFVGRHFEAVYFKNHIKRAYYLTGYGTRDQFAKLYKTIYQFPEFDVRYKLKDLSQY LNIPDILLVKMIQIFDELDFVTITDGVMVVNKDAQKRSISESQIYQDLKQQVKFQELMAL GTPQEIYDWLTDEDD >gi|304426606|gb|AEEM01000012.1| GENE 50 60170 - 61435 1254 421 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0814 NR:ns ## KEGG: GALLO_0814 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 421 1 421 421 681 100.0 0 MDSKNTNQNEKGTNKFSEVVGKAKSQWSGLSKTKKIIAGVAGVIVIGGVGFAIYQASTGT SVASAISGSPLKITVNSADVIIPEDSEKGTTYVAYNVTFENKGSDKIQINSSDVQLVDED GETLSSEYVYASTNDFKVMDLAGASLGKGKKRTGYLVYKVDPKKSKDYSIEAECVVTGDD SYDRKEAEQSLAKVTVTDNRDEIEQLASDYINQVFLASQSTSIGQSTSVGVKASDTAQVT NLASKSDKKKDNDFQLGNSIEADKELFVKRFKEELGSEFDYFTPSDSEMETFVNQYMEAN AKRAQVSVSVEELYPTSAKIKVESKSIDIAKIDMNDLVDGYLEQATGKDFSSDEAVMQDA EKYVFASVPSHFDSTELATETDENSISLSLKDKKWSVDSSDKITNYGYSGLQKSMSGHFF Y >gi|304426606|gb|AEEM01000012.1| GENE 51 61634 - 61879 239 81 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0815 NR:ns ## KEGG: GALLO_0815 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 81 1 87 87 71 90.0 8e-12 MPNHFDRGPGGPHGPEFGGPRPPHRPPYGYRRGGFGLGSILLAGAAAAAAGALIGKASQN QTQNTTRKTKDVTNDDDGFVW >gi|304426606|gb|AEEM01000012.1| GENE 52 61970 - 63319 1316 449 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0816 NR:ns ## KEGG: GALLO_0816 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 448 1 448 449 875 98.0 0 MFEQLKQTANQLGRMRKEHLINQSGSTADDSLDKVRSGQSYLYMSQGMDSEVFEVRFKER VSGSDLTEAIRYALMRFPYINTRLIELDGDFYIVQNPVAMVAHPTKKLGKLGSIRINEHL VEVTYHKNSAYFAFHHALCDGRGVKPFIETVIYYYCQRFYHSNAQAEGIRLKDTPLLPNE TADAFWEFYDYDDSKDFPTFSRDAYEIPESKPNDDINDYRFEITIPQSDYMAVAKANNAT PVILLSYAISQTIAKLFPDFDKPINANIATDMRAALGYENTFKNTVKSMILPYTKDDTSK TFKEIATNYRTYLNQQKDIDFCKKEANGIIGLYNKLDEAPSFEEKQKLLAFMENIHLNTY TISYIGQFILNENEQYIDSIHLYSAGTIGLSINMICASGKFTIDVKQNFPEDTYVKPFLE TLAELGITNAQVSDSIPFTTPKDGLRNRN >gi|304426606|gb|AEEM01000012.1| GENE 53 63414 - 64196 493 260 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0817 NR:ns ## KEGG: GALLO_0817 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 259 1 259 259 399 99.0 1e-110 MIIDSIKKSNGLLQLVTGTVVFMAFVISSNFLKDMSKEATDVGASLRFLLSVILAGVCYY FIKSEKLFNKSIKLSRMSKIWLTILILLFIAFLVVALNIGDNIQGVLSGGFGLFLPSLLV ALSAGIFEEFLVRGLFFSGILNLFQNNRFKLILTSLISSAIFGLLHLVNIIHSPVQAVLQ QVFYATVIGLVFAIIRITANSLWLPVLIHALIDFQPTITSGTVDVNPWLTLIIIYSPLAL FSIITLFSLDKNLNQQETNL >gi|304426606|gb|AEEM01000012.1| GENE 54 64509 - 65489 933 326 aa, chain + ## HITS:1 COG:BS_yxeI KEGG:ns NR:ns ## COG: BS_yxeI COG3049 # Protein_GI_number: 16081005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Penicillin V acylase and related amidases # Organism: Bacillus subtilis # 1 306 1 309 328 174 32.0 2e-43 MCTAITYQTKDNYFGRNLDLDFSYHEEVTICPRNYPLSFKYETKQDTHLAIIGMATVVDD YPLFYDATNEKGLSMAGLNFPENADFKPAKDGKTNVASFEFILWILSQCESVSEVRQQCE NLNLTDDAFSSDYPVSPLHWMISDSKESIVVEPVKDKVAIYDNPIGVLTNNPTFDKQLFN LNNYRHLSPKVSDNLFSKVLDLDVYSRGMGGIGLPGDLSSMSRFVKVAFTKLNAVADSSE ASSVNQFFHILKSVEQQKGLCYVDESNGYEYTIYSSCVNVDKGIYYYTTYENSQITAIDM HQENLDSSRLIRYPLQKEWNVLYQNK >gi|304426606|gb|AEEM01000012.1| GENE 55 65506 - 66033 346 175 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0819 NR:ns ## KEGG: GALLO_0819 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 175 1 175 175 333 100.0 2e-90 MTTYKDLLIDNLNRAYERFERAFNGVTIEEANRFPVANQAPQIKSMTWLAWHTARELDFQ IADLADEKPIWHTQNWKAEFPFTIADDAQDWAHSLSEARLIQSDNKEALFGYLNAATIAA INYVETLTESSLDDIVDDNWTPAVTRGVRLVSIIDDASMHSGQVFYSRRLLGLVD >gi|304426606|gb|AEEM01000012.1| GENE 56 66204 - 66929 289 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 215 1 218 311 115 33 1e-24 MEKVIDLKDLKKAFSAQTVLNGVTLEVNKGEIIGLIGPSGAGKSTMIKTMLGMEKADSGT ALVLNTQMPNRHILGKIGYMAQSDALYDALTGLENLEFYGQMKGIAKKDLTLQIHHVARV VDLQDHLDKFVSGYSGGMKRRLSLAIALLGNPELLILDEPTVGIDPSLRRKIWAELDNIR QEGRSVFITTHVMDEAELTDKVALLLHGDVIAFDTPQGLKERYGVNTVEEAFLAAEDREE F >gi|304426606|gb|AEEM01000012.1| GENE 57 66931 - 68037 1157 368 aa, chain + ## HITS:1 COG:lin0925 KEGG:ns NR:ns ## COG: lin0925 COG0842 # Protein_GI_number: 16799996 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 1 368 1 371 371 227 40.0 3e-59 MRILAIAKKVLKELLRDKRTLAMMFLAPIFIMWLMNVMFSANSTTSVTIAAVDVPSSLIE NLDDVEHVSVEKYTSVKAAQKDLDNQEVDAILTVDDGTYDVTYANTDSSKTTLTRQAIKS VLSLSSINQFMSQVKEAVAETPSLASLLPTSNASSTDLTEHYDYGDENTGFFAKMIPILM GFMVFFFVFLISGMALLKERTSGTLDRLLATPVKRSDIVFGYMISYGIIAVIQTVVIVLS TIWLLDIEVVGNIINVIIVNFVLALVALAFGILLSTLAKSEFQMMQFLPLVIMPQLFFSG IIPLDSMADWVQYIGKILPLSYSGDALTKIIMYGDGFNSIAFDILILLIFLVGLTTANII GLKRYRKV >gi|304426606|gb|AEEM01000012.1| GENE 58 68079 - 68693 438 204 aa, chain + ## HITS:1 COG:lin0926 KEGG:ns NR:ns ## COG: lin0926 COG1309 # Protein_GI_number: 16799997 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 16 130 18 139 218 71 31.0 9e-13 MTEKNIVLSFEERLSKVKMPSGKRNTLLAAMKLFAAQGFHGTSTVQIAEVAGVSQATIFK YFKTKEELLIGVLEPMAELLSAPFIQNIMKFSKKEDIVHYFIYDRYAFIKANHSLVKIIM QELLTNSEMKHFIGKQMEQLAPSIDKIAERLCEGNHLRKTEVIRIAISPFFSYIMQMVIF DVESQDEEYDLALLEQQTLKLLSE >gi|304426606|gb|AEEM01000012.1| GENE 59 68861 - 69379 645 172 aa, chain + ## HITS:1 COG:SP1577 KEGG:ns NR:ns ## COG: SP1577 COG0503 # Protein_GI_number: 15901419 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 170 1 170 170 305 89.0 2e-83 MDLKNYIATIENYPKEGITFRDISPLMADGNAYSYAVREIVQYATDKKIDMIVGPEARGF IVGCPVAFELGIGFAPVRKPGKLPREVISADYQKEYGIDTLCMHADAIKPGQRVLIVDDL LATGGTVKATIEMVERLGGVVAGCAFLVELDGLNGRKALEGYDTKVLMNFPG >gi|304426606|gb|AEEM01000012.1| GENE 60 69486 - 70430 986 314 aa, chain + ## HITS:1 COG:SP1576 KEGG:ns NR:ns ## COG: SP1576 COG1897 # Protein_GI_number: 15901418 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Streptococcus pneumoniae TIGR4 # 1 314 1 314 314 400 59.0 1e-111 MPIKLDKELPALDILREENVFIMDNKRAKHQDIRPMDFLIVNLMPTKEVTETQLLRLLAN TPLQINVEFLYMTSHESKNTTAEHLETFYKTFDDVRHKYYDGLIITGAPVETLDYEEVDY WSELCQIFDWSKTHVYSTLHLCWGAQAGLYYKYGIKKVLLDRKLSGIFSQDVVSPENPIV RGFDDSFMAPHSRYTEVRREDVEKIDDLEVIAASEAVGLSIVASKDLREVYSFGHLEYDR ETLDREYKRDVKVGKNPNIPEHYYLNDDPAQNVPMHWNLAATTFFSNWINYAVYQETPYS LEELEKDFSFYGYL >gi|304426606|gb|AEEM01000012.1| GENE 61 70521 - 71195 814 224 aa, chain + ## HITS:1 COG:SPy0928 KEGG:ns NR:ns ## COG: SPy0928 COG3935 # Protein_GI_number: 15674948 # Func_class: L Replication, recombination and repair # Function: Putative primosome component and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 224 1 226 227 291 69.0 8e-79 MSFLENFKSGNLVLPSALLFHYKDIFKSSDDFLIWQFIYLQNTTKMDDLAPSQIATALDK TVAEVNRSISDLTAQGLLDMKTIELGSEIEVIFDASPVLALLDDLLAKPAEPQENQASNP IKELVEDFERELGRMLSPFELEDLQKTIREDKTDPDLVRAALREAVFNGKTNWNYINAIL RNWRREGITTMRQVEERRKEHEDSKAGKVSVSDDFLAAMDLWSD >gi|304426606|gb|AEEM01000012.1| GENE 62 71195 - 71845 191 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 23 211 24 218 378 78 27 3e-13 MRVGRERLKKILAIIGEMYPEARGELEWETPFQLLIAVILSAQTTDKAVNKITPNLWKKY PEIADLANANLEDVEDCLRTIGLYKNKAKNIVKTARAILRDFDGKVPKTHKELESLPGVG RKTANVVLAEVYGIPSIAVDTHVSRIAKRLNISAPDADVTEIEQDLMKKIPKKDWILTHH RLIFFGRYHCLAKKPKCDICPVQSYCKYYKDNVKNN >gi|304426606|gb|AEEM01000012.1| GENE 63 71909 - 72595 867 228 aa, chain + ## HITS:1 COG:SPy0930 KEGG:ns NR:ns ## COG: SPy0930 COG2384 # Protein_GI_number: 15674950 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 224 1 224 228 288 66.0 6e-78 MQTVLSQRLAAVAEFVPQGARLLDVGSDHAYLPIVLTEEEKISFAIAGEVVKGPYESALH NVAGAGLADKIAVRLADGLAAFDESDNVTAITICGMGGGLIADILAAGVDKLASVERLIL QPNNREDELRAWLMANHFKIIAEKIMTENDKFYEIIVVEHGEMTLSDTELRFGPFLNQEK SAIFKLRWKRELKKLEIALPHVPKNRIDDRAAISQKIAAIKEAINESK >gi|304426606|gb|AEEM01000012.1| GENE 64 72582 - 73370 901 262 aa, chain + ## HITS:1 COG:SPy0931 KEGG:ns NR:ns ## COG: SPy0931 COG0327 # Protein_GI_number: 15674951 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 262 1 262 262 367 64.0 1e-101 MKASEIIARYEAYCPRELSMEGDISGLQIGTLDKDVNRVMIALDVRETTVAEAIEKGVDL IIVKHAPIFKPLKDLVATAQNQIYLDLVKHDIAVYVSHTNIDIVPDGLNDWFCELLEITD TDILTPTADGYGIGRIGKIEEQTFSDFALKVKETFHLDSVRLVAYGNQETLVNRVAICGG SGQGFYRDAMKKGAQVYITGDIYYHTAQEMITNGMLAIDPGHHIEVLFIDKLVEKFNAWK ADNQWNIDFIASQAETNPFYHL >gi|304426606|gb|AEEM01000012.1| GENE 65 73557 - 74426 1193 289 aa, chain + ## HITS:1 COG:SPy0933 KEGG:ns NR:ns ## COG: SPy0933 COG1209 # Protein_GI_number: 15674953 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 288 289 520 90.0 1e-147 MKGIILAGGSGTRLYPLTRAASKQLMPVYDKPMIYYPLSTLMLAGIRDILIISTPTDIHR FEELLGDGSEFGISLSYAVQPSPDGLAQAFIIGEEFIGDDNVALILGDNIYHGPGLSKML QKAASKEKGATVFGYQVKDPERFGVVEFDDNRNAISIEEKPEHPKSHYAVTGLYFYDNDV VEIAKSIKPSARGELEITDVNKVYLERGDLSVEVMERGFAWLDTGTHESLLEAAQYIETV QRMQNLQVANLEEIAYRMGYITKEDVHNLAQPLKKNEYGKYLLRLIGEE >gi|304426606|gb|AEEM01000012.1| GENE 66 74426 - 75019 718 197 aa, chain + ## HITS:1 COG:L198323 KEGG:ns NR:ns ## COG: L198323 COG1898 # Protein_GI_number: 15672178 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Lactococcus lactis # 1 197 1 197 197 349 86.0 2e-96 MTEQFFGKELAARKIEAIPGMIEFDIPVHGDNRGWFKENFQKEKMVPLGFPESFFAEGKL QNNVSFSHKNVLRGLHAEPWDKYISVADEGKVLGSWVDLREGDSFGHVYQTVIDASKGIF VPRGVANGFQVLSDKVAYSYLVNDYWALELKPKYAFVNYADPTLGIKWENLEAAEVSEAD KNHPLLKDVKPLSKEDL >gi|304426606|gb|AEEM01000012.1| GENE 67 75192 - 76241 1252 349 aa, chain + ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 4 347 2 345 346 660 94.0 0 MSEYKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGDRVELVV GDIADAELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIQTNFVGTYTLLEAARKYDIRF HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFG VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGDGKNVRDWIHTNDHSTGVWAI LTKGRIGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDSTKLRE ELGWKPQFTNFEEGLEATIKWYTDNQDWWKAEKEAVEANYAKTQKVLDK >gi|304426606|gb|AEEM01000012.1| GENE 68 76379 - 76801 286 140 aa, chain + ## HITS:1 COG:SA1460 KEGG:ns NR:ns ## COG: SA1460 COG0317 # Protein_GI_number: 15927214 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Staphylococcus aureus N315 # 8 111 31 148 729 66 40.0 2e-11 MKDDVKLAHEIAKRAHHGQVDKAGAPYILHPETVASFVTKDDEKIVAYLHDVIEDTPYQL SDLEEVGFSSEIIKAVDLLTRKDGQSYKQYLKLVKTNELARVVKLADLKHNSDLSRLAQV TRNDIKRLKKYQDATIFLST >gi|304426606|gb|AEEM01000012.1| GENE 69 76921 - 77403 546 160 aa, chain + ## HITS:1 COG:SPy1010 KEGG:ns NR:ns ## COG: SPy1010 COG0494 # Protein_GI_number: 15675013 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 158 1 158 158 271 84.0 3e-73 MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHF TVKEMDFKGVITFPEFTPGHDWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPT WEGDYEIFKWILDDVPFFSAKFNYDDEQRLIDKSVTFYDK >gi|304426606|gb|AEEM01000012.1| GENE 70 77496 - 78683 1286 395 aa, chain + ## HITS:1 COG:SPy1011 KEGG:ns NR:ns ## COG: SPy1011 COG0628 # Protein_GI_number: 15675014 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 6 386 6 386 393 507 71.0 1e-143 MKYHQEKKFTDSWFFKWFLNNQAVVAVLITFLVFLTLYLFTKISFLFTPIISFIAIIMLP LVISAILYYLIKPLVDFIEKRGVSRTTSIFIVFAIIIALLIWAVASFIPTIQEQLTSFVE NLPSYVRSINVEANKFLESPWLANYQEELEEMLSNVSTKAIDYAESFSKNAIDWASNFAS AIARVTVAIIMSPFILFYFLRDSGKMKEGLLKTLPTRMRRPISRVLGDINKQLAGYVQGQ VTVAIVVGIMFTIFFNIIGLRYAATFGIIAGFLNMIPYLGSFLAMVPVVIMGVVQGPIML IKVLITFVVEQTIEGRFVSPLVLGSKLSIHPITIMFILLTSGSMFGVWGVFLGIPIYASI KVVVKEIFEWYKRISGLYEEEVLVIEGEEKAKDVE >gi|304426606|gb|AEEM01000012.1| GENE 71 78673 - 79908 1486 411 aa, chain + ## HITS:1 COG:SPy1012 KEGG:ns NR:ns ## COG: SPy1012 COG0457 # Protein_GI_number: 15675015 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Streptococcus pyogenes M1 GAS # 1 407 1 407 415 484 71.0 1e-136 MLNSEKMVASIQKQDLEHADKYFKRALKEDDAETLLELAEYLESIGFLPQAREIYLQERE RYPEVNINLAQIATEDGDIEGAFLYLDAISPESEAYLSALLVMADIYDMEGLTDVAREKL LLASEISDEPLVIFGLAEIELELGNFNQAIKEYAKLDNREILELTGISTYQRIGRAYASL GKFEAAIEFLEKAIEIEYDDGTIFELATILYDQGEYQKANVYFKQLDTMNPDFEGYEYVY AQSLHEENKTEEALRLVQKGLSKNEFDTNLLLAASQLSYELHDSKQAESYLLKAKDVAVD DEDVLMRLTNLYLEEERYEDVVALSRDNIDSVLTKWNIAKAYQALEADKKALKLYDELAI DLADNPEFLQDYAYILREFGQKERAHQVAERYLQLVPDDVNMVEFLNENEF >gi|304426606|gb|AEEM01000012.1| GENE 72 79892 - 80068 135 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|171779731|ref|ZP_02920687.1| ## NR: gi|171779731|ref|ZP_02920687.1| hypothetical protein STRINF_01568 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 58 1 58 58 72 82.0 7e-12 MKMNFRNLLVSNLITVIIIFVLLSIFDHSGDPLRNIIIVFVGFIVMTIYDFVRTRRKK >gi|304426606|gb|AEEM01000012.1| GENE 73 80190 - 80492 374 100 aa, chain + ## HITS:1 COG:L133446 KEGG:ns NR:ns ## COG: L133446 COG0640 # Protein_GI_number: 15673676 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 100 1 100 100 126 69.0 1e-29 MENVEIFKALANDYRLQILFWLKNPEKYFVHEENVDMREVGVCVGEIQKQLGLTQSTTSH YLSMLQKANLLIATRIGKWTYYRRNEVTLKHLRDFIDKEL >gi|304426606|gb|AEEM01000012.1| GENE 74 80592 - 81779 1623 395 aa, chain + ## HITS:1 COG:L133858 KEGG:ns NR:ns ## COG: L133858 COG1902 # Protein_GI_number: 15673677 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Lactococcus lactis # 1 391 1 391 391 612 73.0 1e-175 MSNQLTDKVVLRHGAVLNNRMAMSPMQTHSGKRGGFVSDDTLRYYNARSKAAGLLITEFH YVSPNGGPAYVPGYPEQLGAYSDEHLDGLRQVAQALKKDGNKAILQIHHGGRAAIGQAVS GQDVVAPSQVDFSFLDYPIRELTTDEIDDIIKDFGKATRRAIKAGFDGVEIHGANHYLIQ QFFSKLSNFRTDKWGGSLEKRMAFPLAVVAEVMDVVAKEAPQDFIVGYRISPEEIHGDAI GYTYKESVQLIAEVVKYQLDYIHLSLWDGYSSRPQGVDKTYAELFREVLDDETKLMLVGG VFEEEAARDAVENYGDLIAVGRGTLVDPLFAEKVMLGQGDTILSEVSPETLDYIKWTPGL FEAFSRQDSLGLPKIPGAQSIYHLHTGRFDMYSKK >gi|304426606|gb|AEEM01000012.1| GENE 75 82170 - 83846 2263 558 aa, chain + ## HITS:1 COG:L210 KEGG:ns NR:ns ## COG: L210 COG0028 # Protein_GI_number: 15673166 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Lactococcus lactis # 4 558 2 554 554 785 70.0 0 MTDNNKQYGADLVVDSLINHDIDYVFGIPGAKIDRVFDTLEDKGPKLIVARHEQNAAFMA QGIGRITGTPGVVITTSGPGVSNLATGLVTATDEGDPVLAISGQVKRSDLLKRSHQSMKN VAMMEPVTKYAVEVHDPNTLSETIANAYRVAKSGKRGASFVSIPQDVTDSLVSVKAIKPL TDPKLGSASVDDVNYLAQAIRNADLPVLLLGNGASTRAVTNAIRKLLEAVKLPVVETFQG AGIVSRELEEDTFFGRVGLFRNQPGDMLLKKADLVIAIGYDPIEYEARNWNAEISARIIV IDVAQAEIDTYFQPERELIGNIADTIDLLLPAVNGYVLPKASVDYLQNLKKNVVEDVKFD RNSKEGLVHPLDVIDVLQENTTDDMTVTVDVGSHYIWMARYFKSYEARHLLFSNGMQTLG VALPWAISAALVRPNTKVISVSGDGGFLFSAQELETAVRLNLPIVHIIWNDGKYNMVEFQ EEMKYGRSSGVDFGPVDFVKYAESFGAKGYRVDSKVSFEETLKKALEEASNGPILIDIPI DYKDNIKLGETILPDEFY >gi|304426606|gb|AEEM01000012.1| GENE 76 83927 - 84646 924 239 aa, chain + ## HITS:1 COG:SP1392 KEGG:ns NR:ns ## COG: SP1392 COG3527 # Protein_GI_number: 15901246 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 239 5 243 243 396 78.0 1e-110 MSEAIKLFQYNTLSALMSGLYGGTLTIGELLEHGDLGIGTLDSIDGELIILDGKAYQAKG SEGKAEVVEVSDDVKVPYAAVVPHQAEVIFKQRFAMTDKELEKRIESYYDGVNLFRSIKI KGTFAKMHVRMIPKSAPDIKFADVATHQPEYTRENISGTIVGIWTPQMFHGVSSAGYHLH FISDDFTFGGHIMDFVISEGVVEVGPVDQLDQRFPVQDRKYLFAKFNMDELKEDITKSE >gi|304426606|gb|AEEM01000012.1| GENE 77 85206 - 86609 1086 467 aa, chain + ## HITS:1 COG:SPy0016 KEGG:ns NR:ns ## COG: SPy0016 COG0531 # Protein_GI_number: 15674262 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Streptococcus pyogenes M1 GAS # 1 459 1 459 463 488 58.0 1e-137 MDIFRKTPMMQKRSFLQRRLGLAELIFLGVGSIVGTGIFTITGVGAAQYAGPAITISILI AALCVTISALFFAEFSSRLPHSGGVYRYLYTVFGEYPAWIAGWFMIIEFAGAISTAASGW GEYLKAFLKTFGISLPTALSGPFNPKNGTYIDIVPVILLFFVTALVLLGVQTVLRFNSIL VIFKLAVLLIFIALGLTAINTANWSDFAPYGFGQIYGGKVGIMAGASLMFFAFLGFESIS MAADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYVLRSIGFP FIGNFVSIVVIMTLVTVCISMMYALTRMIYNISCDGLLPEQFQELTPKSKVPKKATIFVG LVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRKDFGEPKEEEFRTPWVPFLPLL SIVICLSLMTQCKAITWYGFIASFILGSLIYFGYGYRHSKLREDSKK >gi|304426606|gb|AEEM01000012.1| GENE 78 86660 - 88315 1602 551 aa, chain - ## HITS:1 COG:SPy1013 KEGG:ns NR:ns ## COG: SPy1013 COG1293 # Protein_GI_number: 15675016 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Streptococcus pyogenes M1 GAS # 1 550 1 550 550 836 80.0 0 MSFDGFFLHHLTKELQEELLYGRIQKVNQPFERELVLTIRNNRKNYKLLLSAHPVFGRVQ ITTADFQNPQTPNTFTMIMRKYLQGAVIESITQIENDRILEIAFSNKNEIGDNIKVTLVI EIMGKHSNIILIDKAESKIIESIKHIGFSQNSYRTILPGSTYLAPPKTEAKNPFTVSDEK LFELLQTEDLAPRNLQKLFQGLGRDTAENLAAQLSNDKLKQFRAFFARPCQPNMTDKSFA AVLFDKSDKQFDSLSELLDVFYQDKAERDRVNQQSSDLIHRVQTELDKNIKKLGKQEKEL LATENAEEFRQKGELLTTYLTLVPNNQDQVELDNYYTNEKIVIALDKSLTPNQNAQRYFK KYQKLKEAVKHLTGLIQETKDTITYLESVETALNHASISDIEDIREELVETGFVKRRTRD KRHKRKKPEQYLASDGKTIIMVGRNNLQNDELTFKMAKKGELWFHAKDIPGSHVLIKDNL NPSDEVKTDAAELAAYYSKARLSNLVQVDMIEAKKLNKPTGGKPGFVTYTGQKTLRVTPT EEKINSMRMTK >gi|304426606|gb|AEEM01000012.1| GENE 79 88459 - 89316 603 285 aa, chain - ## HITS:1 COG:BH2712 KEGG:ns NR:ns ## COG: BH2712 COG0583 # Protein_GI_number: 15615275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 22 243 16 249 296 61 27.0 2e-09 MKSSYKLSIFDFKLIKDIYETQSFSEAAKLNNITQPAVSKRVKEISNNLCEVFLRKNKKI ALTNKGKEIYHFANQTLLAYNDLLDKLTSDFEQTIVLGSDISYLKTFLSTIQKNLPEHHK LSVQTYSNSRSIFEALLNDQIDLGIMSGSYTQKGVLKIQLRADKLTIVGQKELIEAFDNG QETLFLLYHMTSSYHNFLKEFIKINQLPTQHHLSIDNLSLIEHEVLSGTGITIVSQDIAD RMLTNDNIVISSQKFRDVFIKTYAIIKMDNTYYQDLIPIIQKLKK >gi|304426606|gb|AEEM01000012.1| GENE 80 89499 - 90272 524 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 18 256 1 242 245 206 42 7e-52 MVVLEEELANFDLNAKYMIEMKAIKKSYGKQEVLKNINLSVKKGEVVVLIGPSGSGKSTL IRTINKLEHINGGKMAVMGKNIYDMNMNDNLLRERVNMVFQHFNLFNNMTIARNISIGPE KLHRKSGEKLQEKVSGLLDLVGLSDKWDAYPENLSGGQKQRVAIARALAMEPDIILFDEP TSALDPEMVGEVLQVMKAIAKSGTTMIIVTHEIGFAKEAADRIVFLENGELIADMLPEEV NSSYPNQRVANFLKQIL >gi|304426606|gb|AEEM01000012.1| GENE 81 90288 - 91841 1510 517 aa, chain + ## HITS:1 COG:lin2352_1 KEGG:ns NR:ns ## COG: lin2352_1 COG0834 # Protein_GI_number: 16801415 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 258 509 10 268 271 166 37.0 1e-40 MVIDFLQNYGSFILDGALMTVFLSVVSMILALVLGGFVTAARMSDNLLISGLTKLYIEVV RGLPMLVILSLFFYGLPELGFNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQ AVDSGQFEGARSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLM FTASTIQGISYKPFQAVIAVGIVYLLFTFSTTRIVAHYEKKMSRSTEEPLTIVEKIRQMM QTIKASWKKLTLTTAIIAAIVGIFALNHGGASKTVSSVEKIKESGQLVVATNIGYAPYEF YDLTSGHKKAVGVDIAFAQQLADKLQVKLVVKNMNFDSILGTITSGNADIAIAGMTKTKE REKSVDFTENYVKQTNKVVVRKEVASQYTSIKSLASTTIAVQKSTTQADVVEDDIKPQQI VALSSLPDVFLNLLQGKVDAVVADDTVADQYIASNDNLTYADIELPGTTETAMALTKGNS SLKEYVDQLIEQDKKDGTFDKWMAEYSELAQKNTTEE >gi|304426606|gb|AEEM01000012.1| GENE 82 91856 - 92692 913 278 aa, chain + ## HITS:1 COG:CAC0376 KEGG:ns NR:ns ## COG: CAC0376 COG1834 # Protein_GI_number: 15893667 # Func_class: E Amino acid transport and metabolism # Function: N-Dimethylarginine dimethylaminohydrolase # Organism: Clostridium acetobutylicum # 3 277 16 292 293 267 48.0 1e-71 MSVVDGTSRLRKVLLCKPKFLVSAAPINVISEQYTKPLNRDKMMQEFESVVKAYEENGVE VVQVTSTENMPNAVFARDFGGNVKEGYILGHFKKSIRFLERSHYRKIMEELGIPKIAEVS EGYFEGGDFAFIDEKTLAIGVIDRTNLTGVDEIRKQLEPYGYRVYAIKANPDYLHLDMCF NLVAPKLAVAYEAGLPDDFLALLKEKGIKVIAGTEEMIFKHGYNVEALGDNRVMSLKQNT FINDALRKEGMEVIEVDITELLKAGGGVHCMTFPLERY >gi|304426606|gb|AEEM01000012.1| GENE 83 92764 - 93849 871 361 aa, chain + ## HITS:1 COG:SMc03885 KEGG:ns NR:ns ## COG: SMc03885 COG0079 # Protein_GI_number: 15967021 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Sinorhizobium meliloti # 5 350 1 351 351 257 42.0 3e-68 MSTFLAKSFETIVAYNPGEQLGDDYLKLNANESSQEPSPRVLEVLKNAQKLNYYNDPFQS KLRQKLADLHSLEMSNILVGTGADDVLDLIFRTFFERGDKIAFPKITYPFYKGYADTFGY EALKVPLTKDLHVDLSDYEELPHAVLVVKPDAPTGFLKPLSAIKKLVASHPERLVIVDEA YIDFGGESENAISLVNDFSNVIVVRTFSKSRQLAGARIGYAVACKELIKDMEALKMAVNP FNISLLQEEVALASLEDEFHFEKHVKEIIENRDFLTSALRILGFTVLNSKTNFVYASSKV ISGAELYEKLRARHILIRHYATEEVKDFVRISIGTKQEMHRLVSEIDAILKEKDHVKSVN F >gi|304426606|gb|AEEM01000012.1| GENE 84 93827 - 94792 997 321 aa, chain + ## HITS:1 COG:CAC2945 KEGG:ns NR:ns ## COG: CAC2945 COG1052 # Protein_GI_number: 15896198 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 43 309 40 309 324 166 37.0 5e-41 MLKVLISDYPNVLAERDLSIEVNLLKELLPADSEISVYPYVNEDEFIERMSGVDVLLTAF LPLGETVLEHFPDLKGIAVNATGTNTIDLDYAEKLGIAVQHLGAYSTEDVANHTISLLLA LNQKLFLHRKYIEAGFWNYQKVGNVKRLSSQTLAIFGLGRIGQAVAKRAQSFGMTVIAYD PFLPEKVADELGVKLVSIETIQAQADVISLHLFANSANKHFFNRAFFKGLKKPIIFINVA RGSLVDELALAEALDEGKVIGAGLDVLESENPDLSENPFIGRDNVLITPHAAFYSQESLD TLQTQTVKNAVAILKEYHHEI >gi|304426606|gb|AEEM01000012.1| GENE 85 94782 - 96407 1286 541 aa, chain + ## HITS:1 COG:BS_rocB KEGG:ns NR:ns ## COG: BS_rocB COG4187 # Protein_GI_number: 16080829 # Func_class: E Amino acid transport and metabolism # Function: Arginine degradation protein (predicted deacylase) # Organism: Bacillus subtilis # 1 541 1 551 566 469 43.0 1e-132 MKFETIEAYNLPERIEAISKYLVSILSVNGTSGEVAVADAIYKLVKSAPYFKEHPRCVWQ QALEQDSLKRKNNFALLKKEGTKQTVILHSHMDTVGVEDYGPLKEIAHDSDALQAFFKTY DEDPLIQKHAQSGDWLFGRGILDMKSGDAVNIATIFYYMEHMDELPCNLLLMTNAVEEND HTGAIQASSELLRLRQEGYDFKAAINTDFISPSYEGDEKKYIYTGAAGKMLTCFYIKGRE THVGSCLMGIDATLISSAINLKINTNLDLVETISNEEILPSSALLQRDCKDFYNVQTNKR ANLYFNTFLYEKSADAVLQTLLAASKEAVQEVTTNYEERFKLYTERSHIHSNISHDIVVM TFDEYLARLAKKGYDTKMLISSFLGQIKDYDKREVGFQLIDYLEAKTQSDEAKVVVFLAP PFCPHNYTDSDSEVDQALEQMMTEFPEENFVKRRFFPFLSDSSYLAMRETTEDINKLKAN FPLMDSIYPLPVDTIRTLDIPAVDLGVYGIGAHTWKERIYKPYSYHTLPKVIRSFIEHLI K >gi|304426606|gb|AEEM01000012.1| GENE 86 96725 - 97726 1399 333 aa, chain + ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 329 11 344 344 329 58.0 5e-90 MKNKALIGTLIALVILVAGSMIYDQTKSDSSKNDVVKIGILQYVTHDALDEIERGIEDGL AEAGYDSDNAEITVLNAEGDQSKIQTMSKQLVNAKNDVLIGIATPAAQGLASATSDIPVV MGAISDPVGAKLVKNLEEPEGNVTGVSNQVPIEQTVELIQEITPNAKTIGVLYASSEDNS VSQVAEFKEDAEAAGINVIEYAVPSTNEITTTMSVMTGKVDAIFVPQDNTIASAFTTVVN AANAAKIPIYSCVDTMVEQGSIASVAQSQYDLGVETAKIAVKLLAGKKVSEFPVNIVNTG TPTLNLKAAQELGITIPDSVLSEATVAVEADDN >gi|304426606|gb|AEEM01000012.1| GENE 87 97747 - 98616 1127 289 aa, chain + ## HITS:1 COG:SPy1018 KEGG:ns NR:ns ## COG: SPy1018 COG4120 # Protein_GI_number: 15675019 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 289 1 289 289 377 80.0 1e-104 MIISSVSQGLLWGILGLGIYLTFRILNFPDMTTEGSFPLGGAVAVTLMNHGFHPILATLA GMLAGCFAGLVTGLLYTKGKIPTILAGILVMTSCNSIMLMIMKRANLGLLDIKTLQDLFP FADSTNLLIIGLLAVAIVISGLIFFLYTRLGQAYIATGDNRDMAKSFGINTDRMEVMGLT ISNGLIALSGALVSQQDGYADVSKGIGVIVIGLASIIIGEVLYSTGLTLLERLIAIVVGS ILYQFLITAVIALGFNTNYLKLFSALVLALCLMVPVLKNKFFKGVTLSR >gi|304426606|gb|AEEM01000012.1| GENE 88 98613 - 99371 184 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 233 1 217 311 75 25 2e-12 MKKIVELKNATVQVNNGLDEVKTILDDVNLTIYEHDFLTILGGNGAGKSTLFNVIAGTLM LTSGSIYILDKDVTHLPAEKRANYLARVFQDPKMGTAPRMTVAENLLIAKYRGEKRGLLP RKIHAFTDEFQALVARTGNGLEKHLETPTGLLSGGQRQALSLLMATLKRPELLLLDEHTA ALDPKTSVSLMNLTDEFVTGDHLTALMITHHMEDALKYGNRLIVMKDGKIIKDLNQDEKA QMAIADYYQLFE >gi|304426606|gb|AEEM01000012.1| GENE 89 99546 - 99818 261 90 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0853 NR:ns ## KEGG: GALLO_0853 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 90 1 90 90 107 98.0 2e-22 MTTIRSDKETAQTYASQLVTTCQTLSDVGNASQDTQTELQGNTKAHDLMEESKSLLAQIV SSVETASQNLHSVASDFEVVDQAGAESFGS >gi|304426606|gb|AEEM01000012.1| GENE 90 99825 - 100169 151 114 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0854 NR:ns ## KEGG: GALLO_0854 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 114 1 114 114 158 97.0 6e-38 MTSQDRLIQKERQLLQAFEEATDNRRLAESISNDFEWYDRESLRLENSLWEILEHSRYAG EIELNNNQQRAFRSRTFDCVIDSVVDLKKEEIRLEDEIDNIRNERRKLSLQGEK >gi|304426606|gb|AEEM01000012.1| GENE 91 100171 - 101703 1435 510 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1574 NR:ns ## KEGG: GALLO_1574 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 452 1 503 553 300 39.0 9e-80 MGLNMTLEQSEEQARSTQSVCQAEVEGYQALQRAISDFAEETEKLTGKAYDSAKAYYSAV LLPLAQGGELYSETLSQAIAKLPEEYQNQVDTKSWSEDELLRLIQQEEDLISQLDDMNQK ISRLTISADEKSELRQNNVTLIRGHHANKRIYETILDDLRSYDSYSVTLFNELETIKIQI TTGLSQIGSSWNASSGTFTIPDDLSWATTLTSLSTSKKSVEDIEKADIINDYMQTYGFDR ETATILFDLQQGIIKQAQKEDWSNQKVIYEFNRIVASFVYDAARWHGVAGTLKNVELESL CKEYNLSDIEIGKLRESLNDQHSSTKNSKDFAHEAVQLSAFTEGSWGKSAFDMATVAHVM STVGNNVYQYVNIFGTKIPIIVPMEKYEISFKGDIDSGRYDDADFNSDLDAINTYQRMCD ADNVEDIFKINTKYNSDVITNQVNRVQEFYQNLGKGNITAGKEVTKYVVSAKTIGSNYIK YGNGRSSSEQKQAENDFYDYLERGEKENVK >gi|304426606|gb|AEEM01000012.1| GENE 92 101693 - 102202 308 169 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0542 NR:ns ## KEGG: GALLO_0542 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 168 1 168 169 171 54.0 7e-42 MSNRKKTIIISAIVVLLVLVASFFSYRAYRYHDFKRAYEQGTLVEQLDVLMNGKRYVKAV REAGYDVDSSDVFMYNRILYLTTNDIPAVTIRSTEDDNLFIVTFEVTENNQKENVYFQLD KDFKVTYQSVEDENGNDINITSSQQEKLLKIVKKELKTMLKTIYESMYA >gi|304426606|gb|AEEM01000012.1| GENE 93 102276 - 102794 501 172 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0857 NR:ns ## KEGG: GALLO_0857 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 172 1 167 168 132 47.0 5e-30 MSNRKKVIIVSVIVVLLVLVTSFFGHRAYRYYDFKRAYEKGTTYEQLDVLMNSKRYVKAV RKAEYQVEQSDVFMYGRIPWLVIDEKDNLEVKSPGETIAVSFVANVDSIGKVNAFWVLNN KLKIQDSLYYPIQEDGSDGERVELSTSEEQKLLKEVKKEITDMLKSVYESAY >gi|304426606|gb|AEEM01000012.1| GENE 94 102812 - 103318 253 168 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0857 NR:ns ## KEGG: GALLO_0857 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 168 1 168 168 277 94.0 1e-73 MLSRKKTIIISVIIAFLVLVASFFGYRTYRYHDFKRAYEQGTTYEQLDVLMNNSRYIKKL DRLGYSVADKESLIGGVVPRIQNQKKTVSVYRPKNDKFEISYTLDEGTEVYFELNQKLKM LDTYVMISDNGGIHYGESLTSSQQEKLLKVVKKELKTMLKTIYESMYD >gi|304426606|gb|AEEM01000012.1| GENE 95 103545 - 105206 2348 553 aa, chain + ## HITS:1 COG:SPy1020 KEGG:ns NR:ns ## COG: SPy1020 COG0595 # Protein_GI_number: 15675021 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 553 1 553 553 884 79.0 0 MSDIKIIALGGVRENAKNLYVVEVNDSIFILDAGLKYPENEQLGVDEVIPNIDYLVENKK RVQGIFLTHGHADAIGALPYILSEFKAPVFGSPLTIELAKLFVKKNNNVKKFNNFHVIDA ETEIEFADATISFFKTTHSVPESLGIVVGTDEGNIVYTGDFKFDQAARKYYRTDLSRLTE IGREGVLALLSDSANATSNVLTASESEVAAEMDSIIADAEGRVIIAAVASNLVRIQQVFD SAADYGRRVVLTGFDAENIVRTAIRMKRLRLVDEKLIVKPKDMHKFEDHELIILEAGRMG EPINGLQKMALGRHRYVQIKEGDLVYIVTTPSLSKEAAVARVENLIYKAGGVVKLITQTM NVSGHANARDLQLMINLLQPKYLFPVQGEYRNLATHAELAQEVGMYPENIYIVKRGDVMV LGKDGFNHEGSVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVALTVNKREKKIVSK AKIHTRGFVYVKKSRDILRESAELVNQTVENYLAQDSFDWGELKGAVRDDVAKFLFDQTK RRPAILPVVMEVR >gi|304426606|gb|AEEM01000012.1| GENE 96 105363 - 106076 713 237 aa, chain + ## HITS:1 COG:SP0617 KEGG:ns NR:ns ## COG: SP0617 COG5549 # Protein_GI_number: 15900525 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted Zn-dependent protease # Organism: Streptococcus pneumoniae TIGR4 # 1 237 8 238 240 176 40.0 3e-44 MRNLFRIIFFIPRLIISIIWNFFWAIFRTIVIIGIVCFGLLYYANNSSSQLANTISTIAN NVTSYFSANSDDIANSLKDLSTDDFTYYSGARWSSNSANVYIETTNETLIEAYEEAINAW NATGAFTFNLVSDESSADIIATDYSDASSKAAGLAETETNALTNRITHVDVKLNTYYLTE NDYGYTHNRIVYTAEHELGHAIGLDHDDDEQSVMQSSGSYYGIQDVDIQKVQELYAS >gi|304426606|gb|AEEM01000012.1| GENE 97 106168 - 108087 2039 639 aa, chain + ## HITS:1 COG:SPy1025 KEGG:ns NR:ns ## COG: SPy1025 COG0488 # Protein_GI_number: 15675024 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 638 1 634 635 919 77.0 0 MIILQGNKIERSFSGDVLFDNINIQVDEKDRIALVGRNGAGKSTLLKILVGEETPTSGEI NTKRDLTLSYLAQDSRFESENTIFDEMLHVFDDVRGMESRLRKMEMQMAELTGDAFDKLM SDYDRMSEEFRVKGGFTYEAEIKAILNGFKFDESMWQMKISELSGGQNTRLALAKMLLEK PELLVLDEPTNHLDIETIAWLENYLVNYQGALIIVSHDRYFLDKVATVTLDLTPHSLDRY VGNYSKFMDLKAEKLALEVKNYEKQAKEIAKLEDFVQRNIVRASTTKRAQARRKQLEKME RLDKPTVGQKSANMTFHADKVSGNVVLTVTDAAIGYDNQILSEPINIDIKKFDAIAIVGP NGIGKSTLIKSIVGQIPFIKGTSTYGANVEVGYYDQTQSNLTRTNTVLDELWNDFSTTPE VEIRNRLGAFLFSGDDVKKSVSMLSGGERARLLLAKLSMQNDNFLILDEPTNHLDIDSKE VLEDALIDFDGTLLFVSHDRYFINRVATKVLEISEKGSTLYLGDYDYYLEKKAELEEMER LKAEEAQEKTVAIVEKEPANDYQAQKANQKELRKLTRRIAEIENQLEDIEAREEAINQAM LATNDAVELVDLQKELDDLTEQQETLMLEWEELSEQVEG >gi|304426606|gb|AEEM01000012.1| GENE 98 108323 - 108769 352 148 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0863 NR:ns ## KEGG: GALLO_0863 # Name: not_defined # Def: putative transcriptional regulator, MarR family # Organism: S.gallolyticus # Pathway: not_defined # 1 148 1 148 148 284 100.0 5e-76 MNPTNAPYGWLVKRIAHRLEQNMNNFLKPYNITIMQSWVLMFLKRTEKCYTFKELEKQFE VSQPTMAGILARLDQKNMIITSQDEKDKRIKKVEISDEGRALINRLGEHLDDSERAIVGD FTKDEQETFHLLLERAYYNVVERGDEND >gi|304426606|gb|AEEM01000012.1| GENE 99 108762 - 110513 213 583 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 296 544 93 340 398 86 26 8e-16 MIKTLLAQVKEYKTPSLLAPLCAALEVFFDMSIPFVISKLIDQGIQAGNLAVAMKYGLFM LLLAICGLTTGFLAGKFAAQASAGFAANLREGMYDNIQTFAFSNIDKYSTAGLVTRMTTD VTNVQNAYQMIIRVVVRAPLTIIFSMFMCFVVDRQLSLIFLLAAIILAASLLFIMRKAMP AFNYVFRKYDDLNASVQENISGIRVVKAFVREEHENTKFTKAAENIYRLFVKAEKIVIFN NPIMMFIIFACMICLSWFGARFIVAGSLTTGELTSLLSYIFAMMMSLMMLSMIMVMISMS MASAERISEVLNEKADIVNPENPLMEVSDGSITFDHVHFSYKHGGGEEVLSDINLSVKSG EIIGVIGGTGSGKTSFANLISRLYDVDSGSIKVGGRDVREYDLEVLRDQVAVVLQKNVLF SGTILDNLRWGNENATDEECMEACRQACADEFIERFPDKYNTWIEQGGSNVSGGQKQRLC IARALLKKPKVLILDDSTSAVDTATDANIRQSFAETIPGTTKIIIAQRISSVQHADKILV LDDGKISGFASHDELLKTNAIYREINDVQQQGGGDFDAEGGSN >gi|304426606|gb|AEEM01000012.1| GENE 100 110513 - 112390 191 625 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 401 607 16 226 245 78 29 3e-13 MAQTKKEINKQDTLKRVLAYVLKNYKWRFLLVLVLILVTALCMVRFSLFMQTLIDSYITP LLSAKNPDFSGLAHAIFQLIIIGIIGVLSSYTYNRLMVYVGQGTMRRIRIDLFTHMERLP IKYFDTHAHGDIMSIYTNDVDTLRQLISQSIPQVVNSFFSIVVTFTSMLILNVPLSMLSL FMVVILLTVARKIASQSSKHFHNQQNDLGRVNGFIEEMMDGQKVVKVFNHEERAKEDFRK INQQLRYSATNANIYANILMPVSANIGHISYVLCAMLGATLALHGYAGLTLGTLVSFLAL NRSFANPITQISQQINSVIMAMAGADRVFNLLDAEVETDEGYVELVNATEDAAGNLQEVE KTTGMWAWKHPHEDGTVTYHKQEGRVTFSDVTFGYNDDKMVLHDINLFAEPGQKIAFVGS TGAGKTTITNLINRFYDIQEGKIHYDGINIRKIKKADLRRSLGIVLQDTHLFTGTVMDNI RYGRLNATDDECIAAAKLANAHDFIKRLPEGYDTILTGDGSNLSQGQRQLLAIARAAVAN PPALILDEATSSIDTRTEVHVQEGMDALMKGRTTFVIAHRLSTVRNADCIMVLEQGRIIE RGNHDELIAQKGRYYQLYTGNAISE >gi|304426606|gb|AEEM01000012.1| GENE 101 112522 - 112938 213 138 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0866 NR:ns ## KEGG: GALLO_0866 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 138 1 138 138 243 94.0 2e-63 MAKSIDIRQLSEAISVEKDNGTKVSYFLYPEFEIHQNVLPANTIQDWHKHQAIEEVIVPT KGNVTIQVLEDNVIKTYTANCGEVLCVKQSIHRIIGDDKEETEFIVFRFVPTDNNQSDKI KNDKVDCEKLVREILGEK >gi|304426606|gb|AEEM01000012.1| GENE 102 113077 - 114042 1058 321 aa, chain + ## HITS:1 COG:SPy1026 KEGG:ns NR:ns ## COG: SPy1026 COG1071 # Protein_GI_number: 15675025 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 321 2 322 322 566 85.0 1e-161 MNLSQEQYIDMYLKMQRIREFDMRINKLVRRGFVQGMTHFSVGEEAASVGAMAHLTYDDI IFSNHRGHGQCIAKDMDLNKMMAELAGKVTGVSKGRGGSMHLADFEKGNYGTNGIVGGGY ALAVGAALTQHYQKTDNIVVAFSGDGATNEGSFHESVNLAATWGLPVIFFIINNRYGISM DITRATNTPHLYTRAEAYGIPGFYCEDGNDVLAVYETMGKAVDHVRSGNGPAIVEVESYR WFGHSTADAGKYRSKEEVDDWKKKDPLVKFRTYLTENHLASHDELDAIDAQVVKEIDDAY AFAQNSPEPDLSVAFEDVWVD >gi|304426606|gb|AEEM01000012.1| GENE 103 114074 - 115078 1322 334 aa, chain + ## HITS:1 COG:SPy1028 KEGG:ns NR:ns ## COG: SPy1028 COG0022 # Protein_GI_number: 15675026 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 331 1 331 332 562 90.0 1e-160 MTETKQMALREAVNLAMTEEMRKDDTIFLMGEDVGIYGGDFGTSVGMFEEFGPERIKDTP ISEAAIAGSAIGAAITGLRPIVDVTFMDFITIALDAIVNNGAKNNYMFGGGLKTPVTFRV ASGSGIGSAAQHSQSLEAWLTHIPGIKVVAPGNANDAKGLLKSAIRDNNIVIFMEPKALY GKKEEVNLDSDFYLPLGKGDIKREGTDLTIVSYGRMLERVLQAADEVAADGISVEVVDPR TLIPLDKELIINSVKKTGKLMLVNDAYKTGGFIGEIAALVTESEAFDYLDYPIVRLASED VPVPYARVLEQGILPDVAKIKAAIYKMARNGRDV >gi|304426606|gb|AEEM01000012.1| GENE 104 115093 - 116487 1470 464 aa, chain + ## HITS:1 COG:SPy1029 KEGG:ns NR:ns ## COG: SPy1029 COG0508 # Protein_GI_number: 15675027 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 464 1 469 469 544 66.0 1e-154 MANEIIMPKLGVDMQEGEILEWKKAEGDEVNEGDILLEIMSDKTNMEIEAEDSGVLLKIV HPAGDVVAVTEIIGYIGAEGETLVDSVGEKHVEQLASAQEAKAQPLQASTAPAISQKTSE TGKVRATPAARKLARERDIDLEKITGSGENGRIHKEDVEQFSKIRVTPLARRIAKDKGVD LETLVGTGVSGKITKEDVLASLGDVAPQKEQADVKVTPQAGALADVTAASDGVEIIKMSA MRKAISKGMSHSYFTAPTFTLNYDIDMTNLIALRKQLIEPIMAKTGYKVTFTDLIGLAVI KTLMKEEHRFLNASLINDAQDIELHHFVNLAIAVGLSEGLVVPVVHGADQMSLSDFVVAS KDVIQKAQAGKLKAAEMSGSTFTITNLGMFGVKSFNPIINQPNSAILGISATIETPVVHD GEVVIRPIMGMSLTIDHRLVDGMNGAKFMLDLKALLENPLELLI >gi|304426606|gb|AEEM01000012.1| GENE 105 116632 - 118377 749 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 125 576 3 457 458 293 36 5e-78 MAVEIIMPKLGVDMQEGEIIEWKKAEGELVQEGDILLEIMSDKTNMEIEAEDSGMLLKIV HEAGDVVPVTEIIGYLGAEGEVIDEVVQVTPEQAAADLTAAGLEVPKAVTADVTSEQKAP LAADEYDMIVVGGGPAGYYAAIRGAQLGGKIAIVEKSEFGGTCLNVGCIPTKTYLKNAEI LDGLKIAAGRGINLASTNYSIDMDKTVEFKNSVVKTLTGGVRGLLKANKVTIFDGLAQVN PDKTVTIGSQTIKGHSIILATGSKVSRINIPGIDSPLVLTSDDILDLREVPKSLAVMGGG VVGIELGLVWASYGVDVTVIEMADRIIPAMDKEISQELQKILTKKGMTIKTNVGVAEIVE KNSQLELTLTNGETIQADKALLSIGRVPQMQGLENLNLDMEGNRIKVNAYQETSISGIYA PGDVNGQKMLAHAAYRMGEVAAENALRGNHRKANLTYTPAAVYTHPEVAMVGMTEEAARE QYGDILIGKSSFTGNGRALASNEAQGFVKVIADSKYHEILGVHIIGPAAAELINEAATIM ENELTVDDVAQAIHGHPTFSENMYEAFLDTIGEAIHNPPKK >gi|304426606|gb|AEEM01000012.1| GENE 106 118548 - 119504 921 318 aa, chain + ## HITS:1 COG:SP1869 KEGG:ns NR:ns ## COG: SP1869 COG4606 # Protein_GI_number: 15901697 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 318 6 322 324 320 61.0 2e-87 MKAIRWLLPLSLVLMFLSLSIGASSQFSWLKLFQGEEVAYQVFFESRLPRTLAIVLAAGA MSLSGLLMQTITQNNYAAPSTVGTVEAAQLGMLISLFFFPKASLAQKMSFAFISSMLMTL FFIKVVRRLPFKEKWMLPLVGLIYGGMIGAVAEMIAYRFDLVQSMTSWTQGSFAMIQTNQ YEWLFLNLIIVVGIWRFSESFSIMNLGEEASTMLGLPFSQMEAIALFLVSLTTAVTMITV GSLPFLGVIIPNIVRHFVGNHLKKSRRLVFWSGVCLVLACDILARLIIRPYELSVSVILG VLGSAIFIWMLWRGDVYD >gi|304426606|gb|AEEM01000012.1| GENE 107 119497 - 120462 431 321 aa, chain + ## HITS:1 COG:SP1870 KEGG:ns NR:ns ## COG: SP1870 COG4605 # Protein_GI_number: 15901698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 10 316 9 314 318 250 48.0 3e-66 MTKKNPSSKRIIAVLFVLAVVCFWAYLLPVGGSLLPFVIKLRLKKLCAYCLVAISASLAT ISFQTITGNRFLTPSVLGLENLYVLMQSTYLFFYWHWSQEEPNAIVEFIIVLAIQLIFFF FLQPSIKKLLEKGFGTILLICMSLGTLFRSLSTFMQVLMDPNEYDKLQSKLFASFQNANS DVLVLVAILVLFTAICLYRKSAELDVFYLGRETATLLGIDVPHVQRQVLWFVVLLTSAST AMVGPLTFFGFIVANLAYQIMPDSNHKTLFTATSLLGFIMLVVGQSIVERLFNYSVTISM VIEFCGGGSFFYLLYKERIKP >gi|304426606|gb|AEEM01000012.1| GENE 108 120459 - 121214 225 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 236 278 527 563 91 27 3e-17 MIKMKSIEKAYGDKIVLDNVNLEIKPGKFTAFIGPNGAGKSTLLSIMSRLSKKDKGVLMI KDKEIEAWSSGELAKELTMLKQQLYYQMKLTVEELVAFGRFPYSHGRLTKKDQEKIDEAI TYMDLQPFRKRMIDTLSGGQLQRVFIAMVLAQDTDIVLLDEPLNNLDIKQGISMMKILRS LVDDLGKTVIIVIHDINIASQFVDEMVAFKDGKVFCSGTPHQVMVKEILDNLYDMDLILD EINGNRICVYQ >gi|304426606|gb|AEEM01000012.1| GENE 109 121268 - 122296 1151 342 aa, chain + ## HITS:1 COG:SP1872 KEGG:ns NR:ns ## COG: SP1872 COG4607 # Protein_GI_number: 15901700 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 2 336 12 316 321 266 46.0 5e-71 MMVLVMAVFLGACSSSSSSNSTSQSSDASEVTITDATGKVSVATNPKKVVVLDFGVADTL RALGYEDVIVGMPKGSVPTYLSDLTSKDSITDVGNLKEVNLETIANLEPDLIIASGRTSS QLEDFQEIAPTIYFSTDTSDYWNSVQKNVTELAKIFGSSAKKEAKSQLSDIDDLIEETAE KNADTTKTTLMLMLNEGNMSGIAADGRYSFVYEDLGFKATDLEIEESSHGAKDSSSSSSS SSSSSDTSSSSSSSNQYHGSGLSYESISEVNPDIIFVVDRTLAIGGDDSANSDILNNDLI QATNAGQNNKIITLTSDLWYLSGGGLESTKLMIEEVAAYAGN >gi|304426606|gb|AEEM01000012.1| GENE 110 122379 - 123062 633 227 aa, chain - ## HITS:1 COG:BMEII0551 KEGG:ns NR:ns ## COG: BMEII0551 COG0697 # Protein_GI_number: 17988896 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Brucella melitensis # 1 217 81 297 299 109 35.0 3e-24 MTIILAGAFLAGDLTFWNSSFSYTSVANANLLVNLTPFTVIPVSYFLFKEKMTPKFLLGG LVTLVGVLVLMANKVSLSSDRLLGDSLSLGASIFYAMFMITVYQLRDTVKSNVIMFFSAF GTLLVLAVVIFLTEGFYLPQNIADLLPLLALALVSQILGQGLLAYCLGKVNASLSSLITL SQPVIAALYAWVIFQENLNLQSVIAIVITLIGVYLAKTQTVEENEKA >gi|304426606|gb|AEEM01000012.1| GENE 111 123349 - 124764 912 471 aa, chain + ## HITS:1 COG:BH0578 KEGG:ns NR:ns ## COG: BH0578 COG1167 # Protein_GI_number: 15613141 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus halodurans # 1 470 1 468 469 298 36.0 2e-80 MEEIVIHLNRKKGSAPLYQQIYQQVKSDILLGYLSPNEKILGTRTLAKMLGVSRNTVDRA YMQLTLEGYIESRQNAGFYVLKLPKTFQSEKTFTEEFSDTKKQATDEHIIYDLTNSSHTS NLFPKKVWKKHYQNAIEQLDEAEKLYTLQPFQGDFRLRKEISRYLERIRGVRCQPSQIII TSGLQQSLDYICQFLGDTQKSVLMEEPSYPKAREIFKKNAYPIVTAKVDEKGLNLENIDE NARIEMIYTTPSHQFPLGMIMPISRRQELLAFAQEKDSFIIEDDYDSELRYYERPIPALK SIDYLDRVIYLGTFSKILSPSFRMSYIVLPDQFTEAFLAKFQLYNSTVNLLNQIALANIL SSGDYDRLVRKMNHVFKKRYEAFKKEFEQFQSPIKLSSNVSGQYFLVTFPDKINQCDLIK QAENEGVRVYDTMQFWQEKAACPQESLFLGFSKIDLENIPDCVSRLRRAWD >gi|304426606|gb|AEEM01000012.1| GENE 112 124863 - 125852 1122 329 aa, chain + ## HITS:1 COG:SPy1033 KEGG:ns NR:ns ## COG: SPy1033 COG0095 # Protein_GI_number: 15675030 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Streptococcus pyogenes M1 GAS # 1 328 1 328 329 551 80.0 1e-157 MKYIVNNSHNPAYNVALEAYAFRELLAEDELFILWINEPTIVIGKHQNAIEEINKTYTDE HGIHVVRRLSGGGAVYHDLNNLNYTIISNKSQEGAFDFKTFSQPVIETLADLGVIATFTG RNDLEIDGKKFCGNAQAYYKGRMMHHGCLLFDVDMTVLGNALQVSKDKIESKGVKSVRAR VTNILDELPEKMTVEAFSNQLLNKMKESYPDMTEYVFSDDELKNIQALADQQFGTWDWTY GEAPEYTIKRSVRYPAGKITTYANVEKSVIKGMKLYGDFFGIKDVADIEQALIGLRYEYP DVLAKLQTIDTTQYFTNITPQEIAKAIVE >gi|304426606|gb|AEEM01000012.1| GENE 113 125946 - 126563 826 205 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0878 NR:ns ## KEGG: GALLO_0878 # Name: not_defined # Def: conserved serine rich protein # Organism: S.gallolyticus # Pathway: not_defined # 1 205 1 201 201 250 97.0 2e-65 MEKKNEGAVRNLIALLLVIFALVIGASVIGDLMHEKSSSTAVVASSSDSDDEEDYDYDYD YDDDDDYSSSSSSYSSSSSSSSSSSYSYYSSSSEFNPADYEVPDFNTWNHDQLEYGKKVQ ITGKVLQNMKDGYSYYIRLAMDDDYDKVVLIDIASYDYDDIIAEDDNVTFYGTAEGLTSY ESTWGKEVTLPSMSSEKYTVNSYGN >gi|304426606|gb|AEEM01000012.1| GENE 114 126621 - 126929 398 102 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0879 NR:ns ## KEGG: GALLO_0879 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 102 1 102 102 167 100.0 1e-40 MKRESYFDGGLLSYVGHSILAGLITILTLGICAPWGICIMINWKVKHTVIDGHRLAFDGT ATQLFGNWIKWLILTIITIGIYSFWLNIKLQQWITKHTHYLD >gi|304426606|gb|AEEM01000012.1| GENE 115 127086 - 127955 1030 289 aa, chain - ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 289 1 291 291 233 41.0 3e-61 MDIRVLNYFVTIVQTKSISNAADALHVTQPTLSRQIKELEDELDTILFHRGSREIQLTDD GQYLYNRAIEILALVEKTENNIRKSDGIAGDIYIGAAESQSLDIVARAIKTLTEQYPDIR VHIRSGNADDILEHLNKGVYDLGITIGSYDIKKYNHLALDNRDRWGALVPKGHPLTLIEK PSLADALAYPLITSAQTSTEPSVLAGLGDYRIVATYNLLYNASLLVKAGVGIALCLGNII DTSYPDSDLTFVPFAENNHDTLQILWKKQNTLSPSTKQFLKIMREEIEK >gi|304426606|gb|AEEM01000012.1| GENE 116 128166 - 129026 778 286 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0881 NR:ns ## KEGG: GALLO_0881 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 286 1 286 286 557 98.0 1e-157 MTDINQKLLTGERACFKAENMTITQSVFADGESPLKESRHIVLENDIFRWKYPLWYSRDV KARKIQLLDTARSGIWYTHQINISDSIIQAPKTFRRSSAIVLENVQMPNAQESLWSCKDI KLTNVNITGDYFGMNSKHIKADNVTITGNYCFDGAENIEISNSTLLSKDAFWNCKHVVVR DSTIVGEYLAWNSEDITFINCTIESNQGLCYMKHVTLENCQLINSDLVFEYVEDLQADIH SDIISIKNPISGNITADAIGEIIFDDPEINANQTTISLRKDVLARA >gi|304426606|gb|AEEM01000012.1| GENE 117 129019 - 130188 884 389 aa, chain + ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 4 384 2 382 384 341 41.0 1e-93 MPKYHFDKNVNRRKVNSYKWDVGEDELPMWVADMDFDTAPEIKIALQKRIEQGALGYNTV PDSFFEAYISWWQNRHDFTLQKDWLMFCTGAVPAISSIVRKMTKPSDKVLLLTPVYNIFY NSILNNGREVLESPLVYKDGNYQLDYDDLENKLAQPETTLMIFCNPHNPTGYVWTKAELE KIGQLCLKHDVLILSDEVHCDLTHPDSYYTPFASVSEEIANITMTCLAPSKAFNIAGLQT SVISVPNEALRKRVNRGINTDEVAEPNSFAIQATEAAFNEAGQWLDELNEYLAKNRAYLI EQVTTTFPEIKIVPAKATYLAWLDCSAISQNTTALCAFIRQKTGLILSDGDIFGGNGKLF IRWNYACPLEVLVDGVERFKKAVKEYKEQ >gi|304426606|gb|AEEM01000012.1| GENE 118 130189 - 130665 611 158 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0883 NR:ns ## KEGG: GALLO_0883 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 158 1 158 158 251 98.0 4e-66 MKKFGCFILVMMLLVLSACSSVQDNQQAKQTQTTTTSKTEEKKMVTATVNGETFTITLNQ SQAAQEFLNLLPLTLDMRDVNGNEKYAVLNQTFTNDDEKAGTIHAGDLKLWSGDGLVLFY DDFPSSYQYTDLGTMSDSQGLAEALGSGDVTITFEVVE >gi|304426606|gb|AEEM01000012.1| GENE 119 130665 - 131015 182 116 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0884 NR:ns ## KEGG: GALLO_0884 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 116 1 116 116 222 100.0 3e-57 MRPITVTIAEETFELFLENNASAQAFSELLPLELEMVDVNGNEKFYLLADHLPSQERCSC LIKAGDLLLCQTNELTFFYDDSKTCFKYTYLGHIKDSQNFRKAMTGKTVTVIFEEK >gi|304426606|gb|AEEM01000012.1| GENE 120 131080 - 131595 643 171 aa, chain + ## HITS:1 COG:STM0699 KEGG:ns NR:ns ## COG: STM0699 COG3467 # Protein_GI_number: 16764069 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Salmonella typhimurium LT2 # 9 163 1 153 161 117 39.0 9e-27 MGWQPMTKMRRRDREVTDLTEIKAIVEKNMILHLGLFDEEFPYVVPLHYGYEYREETDQF IFYTHGARQGHKIDLIHQNPNVCVQIEGEVVPDYDYDVPCKYGAFFSSFIGRGKAELLED SEQKAYALNLLMQHQAGKTFEFTEKMTKPVGVIKIVIDQYSAKAKTMMPKK >gi|304426606|gb|AEEM01000012.1| GENE 121 131727 - 133091 1491 454 aa, chain + ## HITS:1 COG:yeeO KEGG:ns NR:ns ## COG: yeeO COG0534 # Protein_GI_number: 16129928 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Escherichia coli K12 # 18 448 92 527 547 184 29.0 4e-46 MESDVVATQQKTYFFSNRDLAKLFIPLIIEQGLEYLVGLIASILVSRAGEAAVSGVSLVE FLMALFISIFAAFATGGGIVAGQYLGDRDGENANKAVNQLAKFTLIFSIVITVFIFAIKP LILNHLFGSITPAVHAQANRYFNIVALSTPFIAMYNCGAAIFRTLNKSRLPMNIMLVMNG LNILMGISLIYGLGWGVEGVAVPILLSRVGAMVLVLWFAHHLTSELTLRNFLREKVDWQM IKKVLGIGLPFGFENGMFFLGRLIVLSIVSLFGTAAIAANSVGGTIIMFQALPGISIVLG LAVIISKCVGAGDYEQAEYYKRKVSRIIHLANGAISLLIIAAMPLLMKIYDLSAQATHYV WIIVLAHGILVSIFWNSGYVLPVIFRSAGDANFPMVVSTLSMLLARVVFAYIFSVTLGMG MLGTWAAMFLDWFIKGIIYEIRYRKGTWKNYKLV >gi|304426606|gb|AEEM01000012.1| GENE 122 133187 - 133867 867 226 aa, chain + ## HITS:1 COG:XF1748 KEGG:ns NR:ns ## COG: XF1748 COG1985 # Protein_GI_number: 15838349 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Xylella fastidiosa 9a5c # 1 222 1 229 237 98 31.0 1e-20 MKKPYIICHMMTSLDGRIDCTMTSKIKGVEAYYDSLAKLDAPSTLSGKVTGMLEMAEYGE FHATNARPLGKEDFSKKVSAEGYEIIVDTKGTLLWRDDSSYEKPHLIITSEAVSTDYLDY LDSKHISWIACGKEKINLARAMEILTEEFAVSRLAVVGGGHINEGFLQAGLLDEISLLIG LGIDGREGMASVFDGFSMETEPTAVTLKEVKTYPDGAIWLRYTPEN >gi|304426606|gb|AEEM01000012.1| GENE 123 134009 - 135172 1171 387 aa, chain + ## HITS:1 COG:L131423 KEGG:ns NR:ns ## COG: L131423 COG2814 # Protein_GI_number: 15672314 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Lactococcus lactis # 1 381 1 387 393 121 27.0 3e-27 MQKTSNRSLVLLLTVGVFGILNTEMGITGVLPHISEHYGVSLTTAGLLVSGFALVVAIAG PTMPLLFSKVNRRLVMLLATGAFTLSTIVSIFAPNFTVLLIARVLPAIFHPVYVSMAMTV AATSVPETESRKAVAQVFMGVSAGTLLGVPVSNFLASQFSLSLAMIFFAVVNLLVFIGTI FLVPSMPVTTGLSYGQQLSILNRKTIWISIISVLLLNGAVLGFNSYMSDFLASFSQINVN LIALVLLGIGLANIVGNALAGQLLDKNAHQLLLSLPLVLIFDLALLFFFGNQALAMIIFV TIFGILGGLVGNVNQYMIYSVGEDAPDFANGLFLAAANLGVTVGTSFTGVFITLGGGSQF SIWGSIIMLIVAFVAILTRQKWLALLK >gi|304426606|gb|AEEM01000012.1| GENE 124 135281 - 136258 1429 325 aa, chain + ## HITS:1 COG:PA2218 KEGG:ns NR:ns ## COG: PA2218 COG1073 # Protein_GI_number: 15597414 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Pseudomonas aeruginosa # 4 323 49 367 367 342 53.0 6e-94 MTEQLHSTQEWDKVFPKSDKVDHKKVTFHNHFGITLVADMYTPKNASGKLPALAVSGPFG AVKEQSSGLYAQEMAERGFLTIAFDPSYTGESAGFPRYMQSPDVNTEDFQAAVDYLSTLE NVDVDKIGIIGICGWGGIALNAAAIDPRIKVTVVSTMYDMSRVTGNGYFDVSDNEESRYQ MRLALANQRTEDYKNDSYKLAGGVVDPLPEDAPQFVKDYYAYYKQPRGYHARSLNSNNGW AIQANTSFLNTRFLYYTNEIRNAVLLVHGDKAHSYYMGKDAFEKLTGDNKKMISVAGASH CDLYDQKDIIPFDDIENFINENLSK >gi|304426606|gb|AEEM01000012.1| GENE 125 136340 - 138793 2747 817 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0890 NR:ns ## KEGG: GALLO_0890 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 817 1 830 830 712 95.0 0 MNKRHLLNRSAIGQAKGHEVKRKSKHGLVSGIILVGAIALFASAGTVSADETTAATANDL VATTDSSTSDDSSEQATSESTTSNESTSETESTAIANEADTTEATSESTDSDKADTATSV TESDENDTSTEQETQADATSDTSASDSTEATDGDGSESDSNENTTDDDSTATDVATSTDT ETTTTDDTSVATISIDNDTATSDSDGVTISGSAITITSAGTYTITGNGDGYTITVDSSVT DAVTLNLDNTTLTNSSISSSGDLNIIVLSDSSISSDLTTAIAAEGVLRISSKNSSTLTVS SSAKHALKGGSVIISDANLNLTSTTSDGIHATSAVTITNSAIVISAEDDGIQIEDDTDVN SGDLTISDSTVTITSTDKGITATDQVTIEGTSVVTITSGDEGIEGRYINLTGGTITISAG DDGINATEWTTKEKADLTNLTNSTDDIENDVAINIAGATVYVIADGDGLDSNGYLTISSG SVYVTQTSVDNAALDYDNTGIITGGTVWAIGNQGMAQAFDTGSTQAYIMANVSGSAGDTI TVTDSSGNVIASTTAAADFGNVVFSAADLVDGETYTITVSSGNQATATATTETTESQFGP GGPMPGGDFSGEMPDFSDGNFPNSDGTFPTDGMTPPDFPTTDTDNATETTEDETSDAETE TTDNTVENEETTSDTENSSDETTTDDTENEADTTDTETADETDSDSSEQTTTDDTTSEET NEETSQAPTAPANDFFVSHHNQQLVARTYFPQMQTRMTQQVFFRQAATSRQNLVLNRHQL TNQKHNKTNHFSLLSFTHQPQNFSKHHSMTKPNAKQA >gi|304426606|gb|AEEM01000012.1| GENE 126 139065 - 140249 1441 394 aa, chain - ## HITS:1 COG:SP1600 KEGG:ns NR:ns ## COG: SP1600 COG0477 # Protein_GI_number: 15901440 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pneumoniae TIGR4 # 11 392 4 382 383 100 26.0 4e-21 MSQKTVNASSWLFKASLLSLSLLAQTAPSISIANTQLAEQFPNVSQSTIELISTLPNFSV LVLILFTEAIGDKFGIKRTILFGLSLYIIGGVLPAVVSSFPIIIAARLLMGLGIGLFNPY SVSLMYQFYDGQQLKGMLGLQNTAQNLGNAAFGFLLSALIISGWRTAFTGFFVGLIPLIL IWLFVTIPDDKKADDVEMPKNSFKDAVSGHILLLALLFMVTFAMFLMMTIKMAVLGQETG LFSPSAASSILALLGLSSMVAALLYAPVSKLIGNFILPVAYTGIAFGFYLVATATNVALV TTGVIIAGLFFGWVFPQAFLRVAQVSPKNGGTLTTSVILMGINLGAAFAAPMVNAIAGIF GQTSASGTLGLVAIGFVILAIIEYIYNFFDRKTT >gi|304426606|gb|AEEM01000012.1| GENE 127 140280 - 141770 2008 496 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 8 462 42 453 484 107 26.0 4e-23 MVKEYTVDVVVAGAGGAGLSAAHAAAQNGLSVLVLEKLAQVGGNTKISSGFFAVGTDEQK ALGYQLTTQEAIDQLQEHNHYLSNGALLKNVIEHAKETLEELKQLGMEIQLNPVENTTQF AHRNNKYRGGSYHMYMDKNRTFPAVQKSIEAEGAQFIFGVTMKELLQDTSGRVTGLTAVD ENGEEIIVHAKASIITTGGFGADKRRVAKVMRTVNLRSLGVPNFGEGLSAMENAGAVNID GAALIHAAQMAESVVSQDTKGKQLAGFNDSPLTQLLLSPLLWVDPNGSRFTNEDVVYDTV QWSNAAYGVGSKYFYVMDKATLDSYTKQPQLLISKSGPGASDAKGDFVALADEAVQQGIA FKGDTIEELAQNAGFDVAAFKLTIAEYNTAIHSQNDKQFSKSVDSLKYAVENGPYYAFIG QVVYLGTVGGVRVDKDLRVLDVHMKAIPGLYTGGANAGGYYAPRNYPAYEGLASGFSWTS GRLASLAAVKDITENN >gi|304426606|gb|AEEM01000012.1| GENE 128 141884 - 142762 579 292 aa, chain + ## HITS:1 COG:BH3842 KEGG:ns NR:ns ## COG: BH3842 COG4753 # Protein_GI_number: 15616404 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 178 283 407 515 530 70 38.0 5e-12 MLKKIYNCQEYMLNEPMLPQEKERKHLYILESLSQVRVNTPKGDMTMQPYDVLVGQSLMG FHLNSHDRNPLLLRLYSIEFDLPSPLNRYTVGDNPLIHDLMNENKSSKAYILFTHLTAKI CHAYLDAIEQLEQLAQDDDKYVHFQKQKIAGLLFTELLRDHENKVSKSGSQFPSAQVKYA SQETQSGMIMQYVTENIQTVTLKETAAHFSYQPNYFSRLCQNLFGVTFNELKTHIKLELA KEQLRLTTKSLDEISQELGYKAVSNFHRNFKAQTGLTPREYRQESRLPNFED >gi|304426606|gb|AEEM01000012.1| GENE 129 142992 - 143606 681 204 aa, chain + ## HITS:1 COG:SP1471 KEGG:ns NR:ns ## COG: SP1471 COG0431 # Protein_GI_number: 15901321 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 202 1 201 201 235 58.0 5e-62 MTRLIALVGTNSDKSTNRQLLSYIAKHFADKADIELMEIKDIPLFNKGLMHSIPTSVQEK EAKIAAADGVIIATPEYDHSIPAALQNALEWFSVGQHPFVDKPVMIVGASYGTLGSSRAQ AQLRQILDAPELRAYIMPSSEYHLAHSLQAFDESGALKDSEQIRRLEALFTDFLVFIKIT SQLTETHAQHQKEVEAFSWEELEQ >gi|304426606|gb|AEEM01000012.1| GENE 130 143624 - 144400 853 258 aa, chain + ## HITS:1 COG:SP1472_1 KEGG:ns NR:ns ## COG: SP1472_1 COG0431 # Protein_GI_number: 15901322 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 185 1 185 187 246 63.0 2e-65 MKIVGIVGSNAPFSHNRLLLQYIGYKFWQLFDLEILEITDVPLFNQSDDQTDNPVIQNLA HKIAAADGVIIATPEHNHTTSAALKSTIEWLSYQIHPFDGKPVMIVGASYYQQGSSRAQL HLRQILDSPGVNAMVLPGNEFLLGNAKEAFDSHYHLKNEATINFLGTCLENFVKYVGLVN GLNAPNEEILKPAGANESTPVSTDANSGASASWNASVAPVAKPITSNSTTPFDKTLDDIF GPDLGIEGKDILDTVALD >gi|304426606|gb|AEEM01000012.1| GENE 131 144431 - 145213 683 260 aa, chain - ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 2 260 6 262 266 201 43.0 1e-51 MTKKEMVTYLLDYLIKENPQFRAIDVPSDLAGQETLLRALLNVRPPMAVSSSFLDMQNNY LQLKKAERVVVFLNHLQPIPTDDCLYVWKGDITRLKVDAIVNAANRRMLGCFQPLHDCAD NAIHTYAGVQLRLDCYKLMQEQGHDEPTGTAKITPAYNLPAKFVLHTVSPAINEHLTPID EDLLAKSYLSCLTLAEKNRLESVALSSLATDDEVHFINENAARIAIQTAKDFLEHSQFVN KIIFNVDEDEELNLYQQLLN >gi|304426606|gb|AEEM01000012.1| GENE 132 145343 - 145603 457 86 aa, chain - ## HITS:1 COG:L195720 KEGG:ns NR:ns ## COG: L195720 COG1937 # Protein_GI_number: 15672769 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 86 1 84 84 60 47.0 1e-09 MATDNKDIINRLKRAEGQLRGIQKMIEDDKECIDIVTQLTAVRSSINRTMGIVISNKINQ IIENPVEDKEKQEEKLQKALELIIKK >gi|304426606|gb|AEEM01000012.1| GENE 133 145828 - 146073 164 81 aa, chain + ## HITS:1 COG:L193718 KEGG:ns NR:ns ## COG: L193718 COG0607 # Protein_GI_number: 15672767 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Lactococcus lactis # 2 76 26 100 102 72 49.0 1e-13 MLLDVRTAQEYARGHIKGARSYPLDRLNTYQGTKDKPIYLICHSGARSKRGAKLLQQKGY EAISVKGGMMAWHRKIIGGNK >gi|304426606|gb|AEEM01000012.1| GENE 134 146070 - 147725 1894 551 aa, chain + ## HITS:1 COG:L194050_1 KEGG:ns NR:ns ## COG: L194050_1 COG0446 # Protein_GI_number: 15672768 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Lactococcus lactis # 3 458 4 456 456 591 67.0 1e-168 MTKILIVGGVAGGMSAATRLRRLMEDAEIIVFDKGPYVSFANCGLPFHVSGEIAERESLI VQTPERLKARFAIDVRPESEVVAVDTDKKTITVRHADKVYEESYDKLILSPGAKPVVPQM EGLDSADNVFVLRNIPDLDKILNALNDTKAKRATVIGAGFIGLEMAENLAKKGLQVTIVE KAPHVLPPLDEEMAAFVKDELTRNGITVYTNQSAKAFKDNGKVIILEDGSELLSDITIMS VGVQPESNLAKEAGLKLGMRGGILVNEYYQTSNSDIYAVGDAIIVKQEITGQDALISLAS PANRQGRQVADNIAGIARQNKGSIGTAIVRVFDLAAASTGLSERIARQQFEDVAVVHTTS KDHASYYPNASDIVLKLIFNQKTGAIYGAQAVGQKGVDKRIDILATAIKAGLTVTDLPEL EFTYAPPFGSAKDPVNMAGYAALNIMEGISENVQWYALSDELAKGKMLLDVRTREEVSRG HFANSINIPLDELRDRLAELDANQEYIISCHSGLRSYIGERILKQNGFKIQNLDGAYFLY STVKPEEIVHD >gi|304426606|gb|AEEM01000012.1| GENE 135 147718 - 148017 313 99 aa, chain + ## HITS:1 COG:lin0618 KEGG:ns NR:ns ## COG: lin0618 COG0607 # Protein_GI_number: 16799693 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Listeria innocua # 1 97 1 97 99 94 41.0 3e-20 MIKTITARELQEKISKKKLHLLDVREKVEYAMGHVPTAVNLPLSEFVSSYQTLDKDKVYH IICQSGSRSEQAAVFLSQQGYQVVNVVGGTSAWTGVLEY >gi|304426606|gb|AEEM01000012.1| GENE 136 148075 - 148725 780 216 aa, chain + ## HITS:1 COG:BH2835 KEGG:ns NR:ns ## COG: BH2835 COG1418 # Protein_GI_number: 15615398 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Bacillus halodurans # 2 216 1 215 215 203 47.0 2e-52 MIDKNNMLQNAEKFVYDKLHTDTSGHDWWHVVRVRNTARELAEKEGADQFICELAALLHD MADDKLNANPEQALTELKAWLMQQELSEEAIEHIIQIITTMSFKGSGQSVPPTLEGKIVQ DADRLDAIGAIGIARCMVYSGSKGRPIHDPSKVARDNPSLEDYRNGQDTAIMHFYEKLFK LKELMNTAYARKMAEHRHKVLEDFLTEFYAEWDGKL >gi|304426606|gb|AEEM01000012.1| GENE 137 148786 - 149253 691 155 aa, chain + ## HITS:1 COG:SP1592 KEGG:ns NR:ns ## COG: SP1592 COG0454 # Protein_GI_number: 15901434 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 103 155 15 67 67 76 64.0 2e-14 MTIRRATIADIPTLMDLLQQVLYVHHVARPDLFQEKGVKYTEDELAALIADDNRPIFVYE DDNGKVLAHMFTIVEDVSAPKVPQKTLFIDDLCVDEAARGQKIGEKLYQFALKYAKEIGC YNLTLNVWSANKSAVRFYERQGMTPQETRMEQIID >gi|304426606|gb|AEEM01000012.1| GENE 138 149488 - 149946 454 152 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0903 NR:ns ## KEGG: GALLO_0903 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 152 1 152 152 266 100.0 2e-70 MPRNFKEALLFTCMMCGMMVFGMSIWNLHVAGAFAWSHVFLGFFPGFVVAFILDMLIIGP LAKKVAFSLIPRDSKSKYVKIFAVSGCMVLGMVTCMSLYGIIFNLGLEGVSLVAYGQAWL TNFVVALPYNFVVVGPIARYFLGEIQKQAVLA >gi|304426606|gb|AEEM01000012.1| GENE 139 150108 - 151295 915 395 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0904 NR:ns ## KEGG: GALLO_0904 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 395 1 395 395 784 99.0 0 MATINDYLAKHKNETFEQFPFNEADILCLNELGYFCFEDLDNTLDFSKELTLHDILMPYE AGEKVFNHSFLVTKARVELLKNVASSERFADLRLSAYVNDVDAEYERQFSAMVFSLPEID HYQLVFRGTDDTLIGWKEDFKLAYVREIPAHRAAVTYLERYLASHPMPLTVSGHSKGGNL ALYAVAHVKEKWRPQIKQVYMLDAPGLQEKGLERAGYQAIRERVRVIRPEESIVGVMLYN DIAPVVVKSQASGIMQHALTTWQFDAETGQLILAEQPTDLSRNLEKTFKQWTDELSSQEL KILFDTLFDTLMSSGIKSINDVTIDREFGAKLATSIASFYSIGTEKKLLLAKSAKLFLEV FVGHSKLGNLGKDRIALNFPDFNSLLSYLNTKKLK >gi|304426606|gb|AEEM01000012.1| GENE 140 151298 - 152215 800 305 aa, chain + ## HITS:1 COG:STM3121 KEGG:ns NR:ns ## COG: STM3121 COG0583 # Protein_GI_number: 16766421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 13 185 3 176 292 93 34.0 6e-19 MAFQSKKEVASLLKQIKYFQSVVEENSFTKAADSHFISQSAISQQIRSLEAELGVTLLTR KNRGFELTEAGRYFYERSLALVADFDALCQETQAIANQQAAQLSVGYLYSYEGSEIQEAI ASFASQFPDVALTVKTGTHDQLYDDLRFGKIDLVINDQRRAFSTDYENLVLTDLPLYVAF AAFNPHTKEEVLAIENSLDKPLILVADSQQEETERAYYRDYIGFSGDMQFVPNATEAKMS VVANRGYLPLEFGKGASLPPTLSCRPIYKQGKPILRRMCAFWKKDNSGYYVETMAELLAK AFQQN >gi|304426606|gb|AEEM01000012.1| GENE 141 152367 - 153131 770 254 aa, chain + ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 1 248 1 246 250 280 50.0 2e-75 MAITENAKQYHEKMFPGYVSDFLRTDPEFIERFDNFAFDEVVNHPNATLDDKTRFMVILA TLLGCQGIDEFQAIVPAALNFGVTPVEIKEIVYQAVAYLGIGRVFPFLKATNKVLEEKGV TLPLEGQATTTIDNRREAGTQAQVDIFGEGMRDFWQSGAKESTHINYWLADNCFGDYYTR KGLDYKQRELITFCFLAAQGGVEPQLTSHAAANMKIGNDKAFLIAVISNALPFIGYPRSL NALRCVNEAADKLK >gi|304426606|gb|AEEM01000012.1| GENE 142 153154 - 154014 1193 286 aa, chain + ## HITS:1 COG:RSc0215 KEGG:ns NR:ns ## COG: RSc0215 COG1028 # Protein_GI_number: 17544934 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 3 273 2 272 275 287 55.0 1e-77 MTKDVMLVTGAGQISMAIARRMGYGKKIVLGDRSLDNAKAIAKTLTEAGFDVVTFEMDLS SRQSIKEMIAYAQTFGDIKYLVNGAGVSPSQASIETVLKVDLYGTSVLLEEVGKVIAKGG AGVTISSQSGHRMPALTAEQDLALAMTPTEELLTLDFLQENKIENSLHAYQLAKRANEKR TMYEAVRWGERGARINDIAPGIIVTPLAIDEFNGIRGDFYKNMFAKSPAGRPGTADEVAD VAELLMSERAQFITGSTFLIDGGATASYFYGPLNPNTETGMAEGKD >gi|304426606|gb|AEEM01000012.1| GENE 143 154054 - 155238 814 394 aa, chain + ## HITS:1 COG:CAC3298 KEGG:ns NR:ns ## COG: CAC3298 COG1979 # Protein_GI_number: 15896542 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 391 1 387 390 281 40.0 2e-75 MNDFQFQNTTKVYFGKHQLQHLHQEVLKYGQKVLIADGGEFIRQSPLYAQVLKELTDNGI QIFELGSVEPNPRHTTVNRGVKLCKGNNIQTVLAVGGGSTIDCCKAIAATSCTDEDDVWT LIEKREPINQALAVIAMPTIASTGSEMDKSCVIANEELHLKKGLNGEAIRPKAAFLNPEN TFTVPARQTACGGFDIMMHLLDMNYFVDSDKYPLQFNVVETLLRTIREQLPIALREPENY EARATLLWGASWALNSFCTSGFKTAPSNHGLEQFSAFYDQTHGLGLALVVTKWMTYLLEK DPTVAPDFARLGTNVLGCQPVDDVIEGAKNAIKAFDAFIVNDLGLPRTMTEIGLNDSKLS EMAHAAVTGYGDGTLKGYRELTEADCLAIYKMCL >gi|304426606|gb|AEEM01000012.1| GENE 144 155240 - 155626 357 128 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0908 NR:ns ## KEGG: GALLO_0908 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 8 128 2 122 122 209 94.0 3e-53 MENGILSVEEILKNRYRQVNDAMVAKDTKTLAELIAPDSVLVHMTGYVQSVKEWLAQIES EEMRYYAWQEDAIKAIYITDNTASLVGQSRVKARVWGSGPATWRLQIKMDLEKIDGDWKI IKQSASTY >gi|304426606|gb|AEEM01000012.1| GENE 145 155645 - 156229 747 194 aa, chain + ## HITS:1 COG:ECs1906 KEGG:ns NR:ns ## COG: ECs1906 COG0702 # Protein_GI_number: 15831160 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Escherichia coli O157:H7 # 1 192 9 207 220 136 38.0 3e-32 MTNVAIIGATGSLGRSLREELKDKADYKVTLFSRRAESLALASNEKAINGSATSGNDLDK VLADQDIVFVALSGDLSKMAREIVASMKRVGVARIVFVSSMGIYGEVAGEPKGVVAPILK PYRKAADIVEQSGLDYTILRPGWFDNGQDSTCQITQKGETFYGHDVSRKAIVTLVKHIID QPETYLNTSLGLYR >gi|304426606|gb|AEEM01000012.1| GENE 146 156327 - 156719 462 130 aa, chain + ## HITS:1 COG:SP1856 KEGG:ns NR:ns ## COG: SP1856 COG0789 # Protein_GI_number: 15901684 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 113 1 113 117 119 56.0 1e-27 MNIKKVSEQTGISADTIRYYERIGLLPRVTRNKSGVRDFSERDIATLEFVRCFRKAGMSV ESLIEYMALVEEGDGTEEARMTLLEEQRDKLAERIAELQSAHDRLNHKIENYQNIILKKE QALFEDDENE >gi|304426606|gb|AEEM01000012.1| GENE 147 156731 - 157576 1003 281 aa, chain + ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 281 15 295 297 326 54.0 3e-89 MDYKTLSNGVKMPILGFGVYQVPDLDECERVVSDAISVGYRSIDTAQAYMNEEAVGNAIR KSGIAREEFFITTKIWISNYGYEKAKASLDASLAKLQTDYIDLVLLHQPFGDYYGAYRAM EEYYKAGKIKAIGISNFAPDRVADLAIFADVTPMVNQVETHVFNQQLNARKTMDEYGVQI ESWGPFAEGRNDFFTNETLVAIGQKYHKSAAQVALRYLIQRDVIVIPKTVHKNRMEQNFD VFDFVLTDDDMAEILKLDMGESQFFSHADPETVKMISSFKI >gi|304426606|gb|AEEM01000012.1| GENE 148 157679 - 158002 560 107 aa, chain + ## HITS:1 COG:Cgl1022 KEGG:ns NR:ns ## COG: Cgl1022 COG0599 # Protein_GI_number: 19552272 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Corynebacterium glutamicum # 1 106 1 107 107 124 56.0 5e-29 MTIKQTAGRDQLGEFAPEFAHFNDDVLFGENWNNNDIDLKTRCIITVVALMASGITDSSL KFHLQNAKANGVSKEEIAAVITHVAFYAGWPKGWAVFNLAKEVWNED >gi|304426606|gb|AEEM01000012.1| GENE 149 158030 - 158455 422 141 aa, chain + ## HITS:1 COG:L178204 KEGG:ns NR:ns ## COG: L178204 COG1917 # Protein_GI_number: 15673516 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Lactococcus lactis # 2 141 1 133 133 131 51.0 3e-31 MIDKATFDKENVFGQGQPNDAFAQYFDGQSFLNPLVGTDSPLFLANVTFEPGCRNHWHVH NADKGGGQILICTAGQGWYQEEGKEAVSLEPGKVIVIPANTKHWHGAKKDSWFSHISVEV PGENTSNTWLEAVSDDDYNAL >gi|304426606|gb|AEEM01000012.1| GENE 150 158598 - 159467 535 289 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0914 NR:ns ## KEGG: GALLO_0914 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 289 1 289 289 542 98.0 1e-153 MTHITHKRIVQAGHFLQLFKNDSQFTTPIFRIDHKRKHLQFVIVFKLDNDEAFYVLNRSK LGYDHELKRLKRFTKSTLYQGILSVPLKARQTIQILQVPNDSKVVKDYVTYYTQTQIDEI LHGKPTESSDVYDPFRDAHSVIFHNLSQAEKLMSYEDYQGIQDFHPFSVVKDQAYALTCA YKDPIKKKTIHLQLMGWYYRGQQLKISWKPDNQRKARWRSSLVAIDRKTRRYFFQGNIYH EKGTDPVFLEQLTFTFHDSMQNSRAAKAEFARFINAIKKQERAALLKLR >gi|304426606|gb|AEEM01000012.1| GENE 151 159588 - 160088 360 166 aa, chain + ## HITS:1 COG:L29314 KEGG:ns NR:ns ## COG: L29314 COG0727 # Protein_GI_number: 15674151 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Lactococcus lactis # 3 164 7 168 168 242 75.0 3e-64 MTEIDIERYHELAQQKQKEHRKFLATLKKKAPKNLDKITQEIHTEVFNEIDCTKCANCCK SLGPLFTEADITRISKVFRMKLSVFEETYLRVDEDGDKVFQSMPCPFLGDDNLCTIYDVR PKACREFPHTDRKKIYQINHLTIKNTLFCPAAYLFVEKLKDRLEGK >gi|304426606|gb|AEEM01000012.1| GENE 152 160349 - 161560 938 403 aa, chain + ## HITS:1 COG:VC1282 KEGG:ns NR:ns ## COG: VC1282 COG1455 # Protein_GI_number: 15641295 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Vibrio cholerae # 4 403 43 432 446 211 32.0 3e-54 MVAPITLISAFINIIANPPVTQELIDSGGGWILLKPWFWFATTFYNQIMLPYNMTIGFFG LIAVFGISYRLSESYKMDSPASASLIAIIMFLITASPVHTIGKDLVMNVSNLGSSGLFGA MIVGLFSVEITRFVINKKITINLPDSVPPLVQDSFIAIIPALLNLIIWYSLSLICQNYAN CLLPELITNILTPLFNIALNPVTVILIVTFGNLLWLFGIHGTSVVYSILMPVLMQNMSAN AENYINGGKNALVLYPSSLLLWMGIGATGCTLALTVLMTKSKAPQLKALGRLSLIPNWCG VNEPVLFGVPIVLNPILGIPFIIVPIVIGGLAYGLMAIGVLDIGHNVMWTMLPLGMQNFL MTQNWVNSVAEYLFMLLAMIIYYPFFKTYEKQLLEEANQNVEA >gi|304426606|gb|AEEM01000012.1| GENE 153 161566 - 163044 1020 492 aa, chain + ## HITS:1 COG:CAC1408 KEGG:ns NR:ns ## COG: CAC1408 COG2723 # Protein_GI_number: 15894687 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 6 492 5 476 477 452 45.0 1e-127 MREIKFPENFLWGGATSASQFEGGYTKGGKGLTVSDVLTVGSKNRNRKITWAFPNSDEIQ YSDVGGFWGDITVNDEGVIKVFQNEYYPSHNASDFYSRYEEDLALLHELGLKSYRMSISW SRIYPNGDDEIPNQEGLKFYRQIFELCHKYHIKPIVTLEHYDVPLGITVKYGGWKNRRVI DLFVRYAETVITEYKNFVDYWIPFNEINSVTVETFKNAGMLKCNDGDRAQAAYNKFLASA LTYKIAKKIRPDFQIGCMVAMTLSYPKTCAPEDQFEALKRCREYDSFLDVLVKGTYPNYK LIEYKQKNIKLNIETKDEEILSQSCVDFIGFSYYTSGVVTKQKVENELHLLGPTNPYLKT NAWGWGIDPLGLRYSLNYLYDRYKKPLFIVENGYGDNDIIENGSIKDNERIDYMKSHLLS VSDAINIDGVNVIGYTPWGIIDCISLGTGEIKKRYGVIYVDVDSEGKGSFSRIKKQSFYW YQNVIKTNGKDL >gi|304426606|gb|AEEM01000012.1| GENE 154 163046 - 163348 358 100 aa, chain + ## HITS:1 COG:lin2472 KEGG:ns NR:ns ## COG: lin2472 COG1440 # Protein_GI_number: 16801534 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Listeria innocua # 1 98 1 99 104 76 44.0 9e-15 MKKVVLLCAGGASTGMLVKKLESVAEKLDKKYSFSAYGIAEATTVASDADIVLLGPQVSY QLEDIKKQLSGVKVAAVDMIDYGTMNAERILKQISSMIGE >gi|304426606|gb|AEEM01000012.1| GENE 155 163352 - 163663 398 103 aa, chain + ## HITS:1 COG:lin2908 KEGG:ns NR:ns ## COG: lin2908 COG1447 # Protein_GI_number: 16801967 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 1 101 1 100 102 70 41.0 9e-13 MDTLEELSFQIISGVGAAKSCYIEALRMSRNGDNILAQKKLDEGYNYYLTGHAAHSKLLQ QTAEKADSVKINLLVVHAEDQLMSAETIKLMVEEFMILYNQAE >gi|304426606|gb|AEEM01000012.1| GENE 156 163755 - 165605 916 616 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0920 NR:ns ## KEGG: GALLO_0920 # Name: not_defined # Def: putative transcription antiterminator # Organism: S.gallolyticus # Pathway: not_defined # 1 616 1 616 616 1031 99.0 0 MKRQLSKQQFDVLDYINDSIEIISIVDLCHKFSISDRTLRKIISNLNAVSEIVKLKRGQG YYIARESKDEVEDIIQENLLNNYLLYSGDDERIDYIIGKVLISEKPVSMSQIAEKFYISK SSVQGDMIQARKWFEENQITFIVSSKGQSISLSKFERIKFLVNYISNNFDSVTMMERFFN NIFEYVLFQELIEVVHRFLISEASHTSDSNTIFFISWIIVLMNNPLVEGDFSINNSIDNS DIFARLRFTLQRELTIELSEVNWNIIEYIFNRVILGYSTVEERQLSKDIVNQFSIILSNE YGVLVQEKYQERLELQIRKIIRNIELKFDRGAKIDLEIQNNFPLAYEISMIFSELFAENN LQVSQSNISYLGLIVNDMITDLFRETVELLVVSNLPEIFENYLSDSILKTVNTRNVLIKT LSLYEFNNNTEYYSSSNVIVLDIGNKLGKVCKDLKISQVSVNPLFTEKDVKKISNLLIQK RKVMRKARKIEAAHCILKKGILNYAYLNHDELITMLNFYGVRRMCFINDVLIVKSNANKN HLDIIALKDKVFSQNFPTKNVIFYSVAIDSDEKEYVKIIEPLLVKNLSKYEKSQLKDKKD LLSLLLGSVENDVSLE >gi|304426606|gb|AEEM01000012.1| GENE 157 165619 - 166350 663 243 aa, chain + ## HITS:1 COG:SP1171 KEGG:ns NR:ns ## COG: SP1171 COG1011 # Protein_GI_number: 15901036 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 18 242 3 227 237 281 63.0 6e-76 MFLYAIIFAKGVFMTADYHYLLFDLDHTLLDFNAAEDVALTELLQEARVSDIQTYKDFYI PMNRQLWDDLSLKKITKKELVNTRFTRLFANFGHEVDGHAFAKRYQEFLSQQGQTLVGAD KLLDNLSQQGYRIFGATNGITKIQTGRMANSTIKDYFEHVFISDEVGYQKPDKGFYDVIA GAISQFNHQEALMIGDNLLADVQGGNNAGIDTVWYNPARKENHTKATPTYVVKDYQGLLE LLR >gi|304426606|gb|AEEM01000012.1| GENE 158 166431 - 167102 471 223 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0922 NR:ns ## KEGG: GALLO_0922 # Name: not_defined # Def: putative transcription regulator, Crp family # Organism: S.gallolyticus # Pathway: not_defined # 1 223 1 223 223 446 100.0 1e-124 MQSTLNITELFQYGERVTFQKGDKLTKSVAGEVNGDIYILSSGVCALSSISCDGKETTYL YFKKQQFVGFTPLMTAFNLNYYGKKTFSIVAKTPCVAYRIPNRNFQDLLGFPSVATLMVN TLTENLVYLMEHFHSSKNEPALVQFSRFLLDQAEKDASGTLVLDTVFTYQEIACYLGVHA VTIARMVKALRDEQLIDKIGHQIRIINPEQMARLITEERKIDY >gi|304426606|gb|AEEM01000012.1| GENE 159 167177 - 168049 646 290 aa, chain - ## HITS:1 COG:STM2201 KEGG:ns NR:ns ## COG: STM2201 COG0583 # Protein_GI_number: 16765531 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 9 281 11 280 287 113 26.0 3e-25 MLDYRVFTFMKVCETLNFTQAAKELHITQPAVTKHIQNLENDYQTKLFTFSGKQCQLTKS GKELLDLLTTINNDIQHFKSHLNQDQTPINFGATLTIGEYVLSDSLAVILSEHPNFQIKM LVDNTETLLKDIDQGKIDFALIEGFFSKEKYDFMPYKTEPFIAVASPKAGLTDKTYTLEE LLDYPIIIREQGSGTREMLEVTLKEANLAITDFHHITEIGSLNAICQLITNNLGITFVYK SVVQKELDSGKLFEIKLDLPPISHDFTFVWRKNSHFKSLYQDIFKLFLTN >gi|304426606|gb|AEEM01000012.1| GENE 160 168150 - 169175 1123 341 aa, chain + ## HITS:1 COG:SPy1056 KEGG:ns NR:ns ## COG: SPy1056 COG2855 # Protein_GI_number: 15675048 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 22 341 22 339 339 401 72.0 1e-112 MMTIEKKLPGIMFCVILALPAWFLGHLFPLVGAPVFAILLGMVVGNFHNNRTQTTDGIAF TSKYILQAAVVLLGFGLNLTQVFKVGTQSLPIIISTIAVSLVVAFLLQKWLKLDSNIAIL VGVGSSICGGSAIAATAPVIKAKDEEVAKSISVIFLFNILAALIFPTLGDLLHLSNQGFA LFAGTAVNDTSSVTATATAWDAVHGSNTLDGATIVKLTRTLAIIPITLGLSFYKAYQDSK NGRAKQTTFQLKKAFPMFVLYFLLASIVTTIVSGLGIDTVIFDNLKTLSKFFIVMAMGAI GLNTNPIKLIKTGGQAIGVGATCWIAITCVSLWMQHLLEIW >gi|304426606|gb|AEEM01000012.1| GENE 161 169380 - 170756 1834 458 aa, chain + ## HITS:1 COG:SPy1067 KEGG:ns NR:ns ## COG: SPy1067 COG1012 # Protein_GI_number: 15675059 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 457 1 456 465 706 72.0 0 MAYKTTYPYTNEVLATFDNATDEALEEALANGHALYKKWRAEGGLDERKVQLHKIAELLR RDVDKYAEVMTKDMGKLFTEAKGEVELCAEIADYYADKAEEFLKPRPLENINGDAYYIKQ ATGVLVAVEPWNFPFYQIMRVFAPNFMIGNPMILKHASICPASAQAFDDLVLEAGAPVGA FKNLFLSYDQVSKAIADPRVVGVCLTGSERGGASIAAEAGANLKKSSMELGGNDAFIILE DADFDLLDKTVFFARLYNAGQVCTSSKRFVVVGQENYDKFVDMVVKHFKSAKWGDPMDQA TTLAPLSSAAAKEEVLGQIKLAKENGATVVYGDEPIDHPGNFVMPTVLTNITKENPIYNQ EIFGPVASIYKVDTEEEAIALANDSSYGLGGTVFSKNLDHAKEVAAKIETGMSFINSGWT SHPEIPFGGIKNSGYGRELSELGFDAFVNEHLVFVPND >gi|304426606|gb|AEEM01000012.1| GENE 162 170859 - 172013 937 384 aa, chain - ## HITS:1 COG:lin0407 KEGG:ns NR:ns ## COG: lin0407 COG4292 # Protein_GI_number: 16799484 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 7 298 4 300 371 72 24.0 1e-12 MPELLAKRVSNYELFFDLAFVLGISQLTSSIHLSHVGVQEIFSFIISNIILLNPWMTEVF YYNKYGDSRRIDIFSVIALMFVVGNLALTFDMNMAHLYAGHPTVVIFNWLLILAYAIIAL QYFLKGRVLGFNRDIRFSIVACAIYGMSLLPFALGLLGANIWTVLIYLIPNIFPVLTRRY HDSSRINFPHAVERAQLVTILTLGETVIAIISTYPLTESLYQGALLFAGMSFMFISYMTQ TFLAIDHHRQAAGSLLFYAHIPIFIGINIFTVGIEFLADSHHANLGFALFLFGFLSFYAG VVTTTHYNQSIYQLHLKTYLKIGLLLGIGAFIMSLVRHHILLLSLVLCATTWAYNRYYLT VRRRKREYHNIPHPDPRKNLRDFS >gi|304426606|gb|AEEM01000012.1| GENE 163 172135 - 173934 1712 599 aa, chain + ## HITS:1 COG:SP0618 KEGG:ns NR:ns ## COG: SP0618 COG0322 # Protein_GI_number: 15900526 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Streptococcus pneumoniae TIGR4 # 1 592 1 591 614 949 78.0 0 MNELIKHKLELLPDSPGCYIHKDKNGTIIYVGKAKNLKNRVRSYFHGSHNTKTELLVSEI EDFEYIVTGSNTEALLLEINLIQENMPKYNIKLKDDKSYPFIKITTNEQYPRLMITRQIK KDGAMYFGPYPDSGAATEIKRLLDRIFPFKKCTNPANKVCFYYHLGQCKAHTICHVDHDY FVDMAHDVKNFLNGQDNKIVDQLKDKMQKASDLMEFERAAEYRDLLQAISTLRTKQRVMS QDMMDRDIFGYYVDKGWMCVQVFFVRQGKLIQRDVNMFPYYNDPEEDFLTYMGQFYRDNK HFIPKEIFIPKEIDEELVKAIVDTKIIKPQRGEKKQLVNLAIKNARVSLQQKFDLLEKDV KKTYGAVENIGELLNIPKPVRIEAFDNSNIQGTSPVAAMVVFVNGKPSKKDYRKFKIKTV VGPDDYASMREVIYRRYSRVMKDGLVPPDLIIIDGGQGQVNVARDVIENKLGLDIPIAGL QKNDKHQTHELLFGDPLEVVELPRNSEEFFLLQRIQDEVHRFAITFHRQVRSKNSFSSKL DGIAGLGPKRKQLLMKHFKSLPNIQKADIDDIVNCGIPRNVATAIKEKLSEEEAVNANH >gi|304426606|gb|AEEM01000012.1| GENE 164 173921 - 174292 455 123 aa, chain + ## HITS:1 COG:MA2818 KEGG:ns NR:ns ## COG: MA2818 COG3603 # Protein_GI_number: 20091642 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 2 121 6 131 135 97 41.0 7e-21 MLTIKPITEEFAVCQVEDYSQVNLENPFVFTGATDDEKSLVCPIALVPENALSVDKTWSA FRIEGVLDFSLIGILSKISSLLAENNIGIFAISTYNTDYILTKTTDFQSALRVLEEAGYQ ILG >gi|304426606|gb|AEEM01000012.1| GENE 165 174418 - 176148 703 576 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0929 NR:ns ## KEGG: GALLO_0929 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 576 1 576 576 1011 99.0 0 MFKNFKKSLSHLREKRFWLPSLMIMLVAFLLILPQIISKGVIVGSDFLFHYNRFYETAMQ IKTGNFSYFISLYGFYSSGRIVNALYGPYFAYFQGLLVLISRNWYTYQLVSRFLLSVIAG FSMYRLIRRVAVKPKISLAIAIFYMMTFSVQYWTFRQGFSSWGAAFMPWCMIPAIDFVKT KKVGVLRLAVAVALMMQVHMLSCFLLIVSYLPFYLYGFIKSKEKKTILIKGIQAVLLALL LTTNVWAALIDVGRNNNLVEPFINSKLYIMTVNQRSIQWLITPLPLLLLVLYQLYFSFRH WRHFDTLLRVTTGAFFFFLVLSSSIFPWYSINKLNLSLVNLIQFPFRFFVPATVLLLLAV ALVLERYFDVKWSKLVTVGAILINLFSLAQLTHLQQEKIAEYYTAKHPIKTKKHTFVWGN SEEVRASFHSSDLYELLDLISKSTPDYLPAEKSNKDNKYVLYEEFVIGHTDAFDKSQDGN ALIFTWTADNSGKVNIPIAKYKDTELTLNGKKLSRTDYSLSGIGTPTVTQKIGKNTLKIT YHIGVWFKALLIANALTWLATAGYAWLKKLRVIKKV >gi|304426606|gb|AEEM01000012.1| GENE 166 176306 - 176908 740 200 aa, chain + ## HITS:1 COG:SPy1069 KEGG:ns NR:ns ## COG: SPy1069 COG0778 # Protein_GI_number: 15675061 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Streptococcus pyogenes M1 GAS # 1 200 1 200 200 322 82.0 3e-88 MKFLELNKKRHAVKTFNDKPVDYKDLRTAIEIATLAPSANNIQPWKFVVVEDKKAELAEH LPEINKKQVEQAQYVVAIFTDTDLVQRSRKIARIGVKSLSNDMLGYYMETLPARFAEFDD KRKGEYLALNAGIVAMNLVLALTDQDISSNIILGFDKSSTNDILEIDKRFRPELLITVGY SDNKPEPSYRLPVDEIIERR >gi|304426606|gb|AEEM01000012.1| GENE 167 177069 - 178475 2289 468 aa, chain + ## HITS:1 COG:SPy1070 KEGG:ns NR:ns ## COG: SPy1070 COG0624 # Protein_GI_number: 15675062 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Streptococcus pyogenes M1 GAS # 2 468 3 469 469 719 77.0 0 MTVDFKAEVEKRKDAMMEDLFALLRINSERDDSKADKEHPFGPGPVKALEHFLAMAERDG YKTRNIDNYAGDFEFGEGDEVLGIFAHLDVVPAGSGWDTDPYEPVIKDGRLYARGSSDDK GPTMACYYALKIIKELGLPVSKKVRFIVGTDEESGWGDMEYYFAHNGLKDPDFGFSPDAE FPIINGEKGNITEFLHFAGDNNGAFTLNSFDAGLRDNMVPESATAIFTADSTLADLQEKL AAFAAAENLEAELVQEGDAFRATVIGKSAHGSTPELGLNAATYLAKFLDQFAFDGAAKVY LDTTANVLHKDFAGENLGVAYTDAKMGALSMNAGVFKFDRNSDDNTITLNFRYPQGTDAQ TIKAELEKLAGVTKVTLSDHEHTPHYVPADDPLVSTLLSVYEKQTGLKGYEQVIGGGTFG RLLKRGVAFGAMFPDYVNTMHQANEFADVDDLYRAAAIYAEALYELIK >gi|304426606|gb|AEEM01000012.1| GENE 168 178564 - 179148 719 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 1 192 1 192 192 281 65 2e-74 MDTIEQLIADIMADEQNATYTQQGIKPLFTVPKTARINIVGQAPGIRAQESGLYWNDPSG DNLRKWLGVDREIFYDSGLFAVVPMDYYFPGTGKSGDLPPRKGFAEKWHKRTLAFAPNIE LHILVGSYAQRYYLQQKSSATLTETVKHYRAYLPEFFPLVHPSPRNNLWQARNLWFAKEV IPDLQKRVKEILER >gi|304426606|gb|AEEM01000012.1| GENE 169 179227 - 181017 2269 596 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0933 NR:ns ## KEGG: GALLO_0933 # Name: tanA # Def: putative tannase (serine rich protein) # Organism: S.gallolyticus # Pathway: not_defined # 1 596 1 596 596 913 99.0 0 MPRKKWFFTSSAVLLCSAMLLTACSSSSNSSTSSSSSQNTTASTSSLSSGEVSTTLDKVD NSKWQYNADDNVYYQIGISYAANPTDAEQQTLSIFVPGDYMTATDNGDGTYTCEINTSAT VGNYTSETAPIVIPINTPGYSAMSALTEYTSDATDYTSQGMIYVSAGLRGRDSGAPSGVT DAKAAIRYLRYNQGNISGNTDSIFVFGMSGGGAQSAIIGSSGDSSLYDDYLTEIGAVEGV SDSVAGVMAWCPITNLDTANEAYEWNMGSTRSDLSDEEQTISDGLATAFAKYINKLGLQD EDGNKLTLKKSDDGIYQAGSYYNYLKSVIEDSLNTFLANTTFPYDASSSSQGGLGGGDMP TGEAPTDLGTTDDTTSIEDVDDINRTSSSSITIDLSGTYETAADYIAALNADSTWVTYDE DTNTASISSIADFVKYMKSSTKSLGAFDALDLSQGENQLFGYGDGNSVHWDSTLGDLVKG TDYEEAFTTDLAKTDSLGNDLTTRINMYTPLYYLTDYYGGENSSNVASYWRIRTGLSQGD TALTTEVNLALALENYGVKDLDFATVWGEQHTEAEISGDSTSNFIDWVNQSLADNS >gi|304426606|gb|AEEM01000012.1| GENE 170 181140 - 181811 691 223 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0934 NR:ns ## KEGG: GALLO_0934 # Name: not_defined # Def: putative regulatory protein # Organism: S.gallolyticus # Pathway: not_defined # 1 223 1 223 223 411 99.0 1e-113 MLSSEVIRISKEKILQEFYALGTRFEVPKNALINTTVCQEKITHVYLLESGIVSLSSITP QGQTIIYQYFSQPGFLNIVPLLTRFYLGYENDMTVDLTAKTACVIYRLTVETFMAKLAEP LVKDLIIQTVLADYVTVMEKIRDSGEDSTKVNLYRFITQHASQDETGAYILDDFFTYTEI GNYLQVHEVTIARLMSELKRENIIAKQGKTLCIIDMNALERLK >gi|304426606|gb|AEEM01000012.1| GENE 171 181875 - 183248 1708 457 aa, chain - ## HITS:1 COG:SPy1071 KEGG:ns NR:ns ## COG: SPy1071 COG0486 # Protein_GI_number: 15675063 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pyogenes M1 GAS # 2 457 3 458 458 731 88.0 0 MITNEFDTIAAISTPLGEGAIGIVRLSGTEALAIAQKVYRGKDLNKVASHTINYGHIVDP NTDEVLDEVMVSVMLAPKTFTCENVVEINTHGGVAVTNEILRLVLRQGARLAEPGEFTKR AFLNGRVDLTQAEAVMDIIRAKTDKAMNIAVKQLDGSLSQLINDTRQEILNTLAQVEVNI DYPEYDDVEEMTTALIREKTQEFQELLENLLRTAKRGKILREGLSTAIIGRPNVGKSSLL NNLLREDKAIVTDIEGTTRDVIEEYVNIKGVPLKLVDTAGIRETDDVVEKIGVERSKKAL EEADLVLLVLNSSEPLTNQDRALLELSKDSNRIILLNKTDLPEKIEADQLPDDVIRISVL KNQNIDVIEERINQLFFDNAGIVEKDATYLSNARHISLIEKAVQSLQAVNEGLELGMPVD LLQIDLTRCWEILGEITGDAAPDELITKLFSQFCLGK >gi|304426606|gb|AEEM01000012.1| GENE 172 183514 - 184188 953 224 aa, chain + ## HITS:1 COG:SPy0889 KEGG:ns NR:ns ## COG: SPy0889 COG0120 # Protein_GI_number: 15674914 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 223 1 223 227 330 79.0 1e-90 MEKLKKMAGVTAAQYVKDGMVVGLGTGSTAYFFVEEIGRRMKEEGLKVVGVTTSSQTTAQ AEGLGIPLKAVDDIDVIDVTVDGADEVDTNFNGIKGGGGALLMEKIVATPTKEYIWVVDE SKMVDKLGAFKLPVEVVQYGADRIFREFEKKGYKPSYRMANGERFVTDMKNYIIDLDLGV IENPVELGKELKAMVGVVEHGLFNGMVNKVIVAGKDGVNILEAK >gi|304426606|gb|AEEM01000012.1| GENE 173 184352 - 185563 1681 403 aa, chain + ## HITS:1 COG:SP0829 KEGG:ns NR:ns ## COG: SP0829 COG1015 # Protein_GI_number: 15900716 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Streptococcus pneumoniae TIGR4 # 1 403 1 403 403 717 86.0 0 MSTFNRIHLVVLDSVGIGAAPDANNFVNAGVPDGASDTLGHISKTVGLTVPNMAKIGLGN IPRETPLKTVPAEAQPSGYATKLEEVSRGKDTMTGHWEIMGLNITEPFDTFFEGFPEEIL TKIEEFSGRKIIREANKPYSGTQVIADFGERQMKTGELIVYTSADPVLQIAAHEDIIPLD ELYKICEFARSITLERPSLLGRIIARPYVGEPGNFTRTANRRDYALSPFAPTVLNKLADA GIPTYGVGKINDIFNGSGITNDMGHNKSNMHGVDTLIKTLQLPEFTKGLSFTNLVDFDAM YGHRRNAAGYRDCLEEFDNRLPEIMENMKSDDLLLITADHGNDPTYTGTDHTREYIPLLA YSPSFKGNGVLPVGHFADISATIAENFGVETAMIGQSFLEKLV >gi|304426606|gb|AEEM01000012.1| GENE 174 185573 - 186385 1144 270 aa, chain + ## HITS:1 COG:SPy0892 KEGG:ns NR:ns ## COG: SPy0892 COG0005 # Protein_GI_number: 15674917 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 3 270 2 269 269 433 79.0 1e-121 MTTIIEKIEEARQFLVSQSCDAPEFGLILGSGLGELAEEIENAVVIPYEKIPNWGKSTVA GHAGQLVYGDLGGHKVIALQGRFHFYEGNPMELVTFPVRVMKALGCKGLIVTNAAGGIGF GPGTLMAISDHINMTGQNPLIGANLDDFGPRFPDMSDAYTAEYRDTAHKVAEKIGIKLDE GVYLGVSGPCYETPAEIRAFQTLGADAVGMSTVPEVIVAAHSGLKVLGISAITNHAAGFQ SSLNHEEVVAVTQQIKEDFKTLVKAVLAEL >gi|304426606|gb|AEEM01000012.1| GENE 175 186436 - 187140 742 234 aa, chain + ## HITS:1 COG:STM2437 KEGG:ns NR:ns ## COG: STM2437 COG0518 # Protein_GI_number: 16765757 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Salmonella typhimurium LT2 # 1 233 1 233 239 267 51.0 2e-71 MRIHFIVHEAFEAPGAYYDWAIKRGHDVTMTKLYQGEKLPKNSSSIDLLIVMGGPQSPRT TVAECPHFDAQAEISLIKEAISQDKRVLGICLGAQLLGEAYGASVERSPEKEIGNYPITL TEAGLANCNLSHIGTSAIVGHWHSDMPGLTLQAKILATSQGCPRQIVKYSDKHYAFQCHL EFSKPLIEALLAEEVDYDEQVKTHSYLQAANEMLAYDYSEMNHILEQFLDAFTK >gi|304426606|gb|AEEM01000012.1| GENE 176 187124 - 188413 1017 429 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 65 384 35 353 380 155 32.0 2e-37 MLSQNKRFNSKAYCLRFSATLLLTSLVAGVGGILLHDLLELVEWMIFGHGESTGAQPVTN LQFIIILLAGIISAFIWFVLQDKNRQIISIKSQLKATDDSKRPILWIHLIHIFLQVASVG AGSPIGKEGAPRELGALGAGRISDRMTLTLKDRRLAIICGASAGLAAVYQVPIASIFFAF ETLGLGLSFLNLISVSSTAILASLIAGTVISDTPLYHSGQVVLDAKTCGLTILLAILITP LAQLFRYLTQKAQASKVTTKSILWKLPLTFLLLASFSLYFPEILGNGGALAQAVFDGMGV WYALACVVIKAVLVLLTLKNGAYGGTLTPSFSIGAVLGFLVAVLCQLVVPELSLTSAMLI GSSIFLAITMNAPLTAVGLVVSFTGQSLTALPILLFAVIVAFATKTIIEHIERKYYVNPY RSQTRRNRR >gi|304426606|gb|AEEM01000012.1| GENE 177 188370 - 189077 979 235 aa, chain + ## HITS:1 COG:SP0835 KEGG:ns NR:ns ## COG: SP0835 COG0813 # Protein_GI_number: 15900722 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 235 1 236 236 360 80.0 1e-99 MSIHIEAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNNVRGMLGFTGTYKGERVSVM GTGMGMPSISIYATELIQSYGVKKLIRVGTAGSLNKDVHVRELVLAQAAATTSSMIKNEW PQYDFPQIADFTLLDKAYHIAQDLGMTTHVGSVLSVDAFYSDFAENNVKLGQLGVKAVEM EAAALYYLAAKHGVQALGIMTISDSLVADEDTTAQERQTTFTDMMKVGLETLIAD >gi|304426606|gb|AEEM01000012.1| GENE 178 189077 - 189853 593 258 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0942 NR:ns ## KEGG: GALLO_0942 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 258 1 258 258 474 99.0 1e-132 MQEIYETIDILLDVYAYNHAWKIAEQHSDFPAQSRYLLEMLKERRELNVDFAFSHPAENQ AIFANYGVSLITNAYEEEQLANYIMDLEAKVKNGNIIDFVRSVSPILYRLFQRLAKREIP NLENYIHDAKNDQYDTWLFTKMKQSDYAIFHRYLEIRRDGKVTSKALAELLQYGQLPQEI KQLISELRNFEKSVRNPLAHLIKPFDEEELHRTTNFSSQAFLDKIIALATYAGVKYNKEK FYFDQVNDIIKSELKRNG >gi|304426606|gb|AEEM01000012.1| GENE 179 189888 - 190745 894 285 aa, chain - ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 284 18 301 301 466 84.0 1e-131 MNEAAKQLFITQPSLSNAVRDLEREMGIEIFIRNPKGITLTKDGVEFLSYARQILEQTAL LEERYKSKNTNRELFSVSSQHYAFVVNAFVSLLEGTDMSRYELFLRETRTYEIIDDVKNF RSEIGVLFLNSYNHDVLTKMFDDNHLTYTSLFRTRPHIFVSKNNPLASKKLVTMEDLEDF PYLSYDQGIHNSFYFSEEIFSQIPHKKSIVVSDRATLFNLLIGLDGYTIATGILNSNLNG DDIVSIPLDVEDMIDIVYIRHEKANLSKMGERFIEYLLEEVKFDN >gi|304426606|gb|AEEM01000012.1| GENE 180 191091 - 192572 1703 493 aa, chain + ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 9 493 3 481 481 407 52.0 1e-113 MPTHSRHRRHHKSSRSYSRFDTKTIVNSVLLVLFALLAGIATYLMYANNILAFRHLNIIY TVLLVAVFLISLVLIIRKKGKIVVTVLLVIFSIVAAISLFAFKSLVDVANDMNKSASYSE IEMNVVVPADSSISDVTELSSVQAPTNADGSNIDALISQIKSDKGVDLATETVDSYQAAY ENLINGSSQAMVLNSAYSSLLELSYDDYESNLKTIYTYKIKKSASSEAKSSDANVFNIYI SGIDTYGSISTVSRSDVNIILTVNMNTHKILMTTTPRDSYVQIPDGGADQYDKLTHAGIY GVETSEKTLENLYGIDIDYYARINFTSFVSLIDAIGGVTVYNDQAFTSLHGNYNFEVGNV NLSSGEEALGFVRERYSLTNGDYDRGNNQLKVIQAIINKLTSFSSISNYSTIISTLQDSV QTDMSLDTMMSLANAQLDSGKKFTITSQEVTGTGSTGELTSYAMPTASLYMIQLDDASVA SASQAIKDVMEGK >gi|304426606|gb|AEEM01000012.1| GENE 181 192573 - 193304 759 243 aa, chain + ## HITS:1 COG:SP0347 KEGG:ns NR:ns ## COG: SP0347 COG4464 # Protein_GI_number: 15900276 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 1 241 1 241 243 328 65.0 6e-90 MIDIHSHIVFDVDDGPTTIEESLALIGESYRQGVRTIVSTSHRRKGMFETPEDKIFANFS QVKEAAEAKYEGLEILYGGELYYSSDILERLEHHQVPRMNDTRFALIEFSMTTPWKEIHT ALSNVIMLGITPVVAHIERYNALEFNEERVKELINMGCYTQINSSHVLKPKLFGDKYRQF KKRARYFLEKNLVHCVASDMHNLGPRPPFMDEAREIVTKDFGPNRAYALFEGNPQTLLEN KDL >gi|304426606|gb|AEEM01000012.1| GENE 182 193313 - 194002 907 229 aa, chain + ## HITS:1 COG:SP0348 KEGG:ns NR:ns ## COG: SP0348 COG3944 # Protein_GI_number: 15900277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 8 229 6 229 230 215 55.0 6e-56 MNSNDNASIEIDVLYLLRKLWSRKFFIIFIALAVGIVALLGSIFFIKPKYTSTTRIYVVS RSSDSSLTNQDLQAGSYLVNDYKEVITSNEVLSSVIDQENLSLSTSELSNMISVSIPTDT RVISISVEDTDAQEASDIANTIREVAAEKIKSVTKVDDVTTLEAAEVASKPSSPNIKRNA ALGALVGGFLAIVGILVLEVLDDRVRRPEDVEEVLGMTLLGVVPDIDKL >gi|304426606|gb|AEEM01000012.1| GENE 183 194017 - 194757 832 246 aa, chain + ## HITS:1 COG:SP0349 KEGG:ns NR:ns ## COG: SP0349 COG0489 # Protein_GI_number: 15900278 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Streptococcus pneumoniae TIGR4 # 1 225 1 225 227 283 60.0 2e-76 MPQLELVRAKAQMVKSMEEYYNSIRTNIQFSGRDLKVITLTSAQPGEGKSTTSVNLAISF ARAGFRTLLIDADTRNSVMSGTFKSNERYQGLTSFLSGNAELSDVICDTSIDNLMIIPAG QVPPNPTSLIQNDNFKAMIETVRGLYDYVIIDTPPLGLVIDAAILAHHSDASLLVTKAGE DRRRTVTKLKEQLEQSGSVFLGVILNKYDIHLDKYGSYGSYGGYGSYGNYGKSEEKTKIG RGKRKK >gi|304426606|gb|AEEM01000012.1| GENE 184 194796 - 196172 979 458 aa, chain + ## HITS:1 COG:all4160_2 KEGG:ns NR:ns ## COG: all4160_2 COG2148 # Protein_GI_number: 17231652 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Nostoc sp. PCC 7120 # 263 454 33 221 226 196 52.0 6e-50 MYSEDSKKKVYYLLSDIIALVVSYLILAQFYPYHLFDSKFFAVVFGILIVIVGVLSDEYS SITNRGYLKELKASVIYGMKVLVLFTFVLILGKIRFIHDISQMSYFFLGQIFILVSLFVF IGRILVKNLFKSHATDIKQVLFVTDFTNGKEVIKELNNSNYHIAAYISRRDNPDISQPIL KSTKEIRDFVANHQVDEIFVAKNHQDDFIEFAHCLKLLGIPTTVAVGNYSDFYVGNSVLK KVGDTTFITTAFNIVKFRQIALKRLMDIAMALVGLVITGIVAIIIAPIVKKQSPGPLIFK QKRVGKNGKVFEIYKFRSMYTDAEERKKELLAQNDLDTDLMFKMEDDPRIFPFGHKLRDW SLDELPQFINVLKGEMSVVGTRPPTLDEYHHYELHHFKRLTTKPGITGLWQVSGRSDITD FEEVVALDMKYIQNWSISEDIKIIAKTFGVVLKREGSR >gi|304426606|gb|AEEM01000012.1| GENE 185 196205 - 197380 1266 391 aa, chain + ## HITS:1 COG:SPy0786 KEGG:ns NR:ns ## COG: SPy0786 COG0438 # Protein_GI_number: 15674830 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 387 1 380 384 390 49.0 1e-108 MKSVYIIGSKGIPANYGGFETFVEKLTENQKDKNIKYYVACMRENSAKSNITDDIFEHNG ATCFNIDVPNIGPARAIAYDIAALNRSIEIAKENGDVNPIFYVLACRIGPFINHFKKQIH ALGGQLFVNPDGHEWMRQKWSAPVRRYWKVSESLMVKHADLLVCDSKNIEKYIQDDYKKY SPKTTYIAYGTELEKSSLSSKDRVVREWFSEKGVSENNYYLVVGRFVPENNYEAMLREFM KSNTKKDFVLITNVEQNAFYEKLKKETGFDKDSRIKFVGTVYNQELLKYIRENAYAYFHG HEVGGTNPSLLEALSSTKLNLLLNVGFNKEVGEDGAIYWDKDNLHKVIEDAEAMSQEQID ELDRLSTKQVQEHFSWDFIVDEYEGLFGEFD >gi|304426606|gb|AEEM01000012.1| GENE 186 197381 - 198841 1266 486 aa, chain + ## HITS:1 COG:FN0906 KEGG:ns NR:ns ## COG: FN0906 COG0240 # Protein_GI_number: 19704241 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 336 1 333 335 305 48.0 1e-82 MFSIGVIGAGTWGLALARVLSLNGNNVTVWSAIPSEIDELVETRRNNRLPDMVIPDNIVF TKSIEEVCKKKDIILFAVPSVFVRETAAKIREFIPKNQIIVDVAKGIEKKTHYMLSEVIT TEIKKDGKHDNIEVVALSGPTHAEEVALDLPTTIVSACENETVAKFVQDIFMSENLRVYT NNDIKGVELCGALKNIVALAAGISQGLGYGDNAKAALITRGMSEIKRLGLAMGCLESTFE GLAGVGDLIVTATSEHSRNNKAGQLIGQGYSVQEALDKVQMVVEGVNALPAALELSETYQ IELPIIFAVNDIINKGCNPAQVVKELMNRDKKSECEKSILDITFENTILKNKRGNEMKRV ITYGTFDLLHYGHINLLKRAKALGDYLVVVISSDEFNWNEKQKKCYFSYEQRKALVEAVR YVDLVIPETSWEQKKSDVHEYHIDTFVMGDDWKGKFDFLEEEGVEVVYLPRTPEISTTQI KKDLNK >gi|304426606|gb|AEEM01000012.1| GENE 187 198852 - 199670 498 272 aa, chain + ## HITS:1 COG:L15884 KEGG:ns NR:ns ## COG: L15884 COG3475 # Protein_GI_number: 15672196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Lactococcus lactis # 5 264 7 265 278 115 30.0 8e-26 MEPIEKLHKIDLEIVKSVIKVFEKYDLKYFMLGGTMLGAIRHGGFIPWDDDIDLGMPRKD YEKFLKVAEDELPSHLQIVNYKNTPSYQYYITRVQDTNVKVIEERIGNDSKFTFASIDIF PIDGTPNNKLLRKIYYFRVLTHRALMSLHYKDSIDRKRKRGKLESAFLWGMEKIPFEKII NPYNEKEKIDRLLSHQNIDNSNYIGNIMGAYRTREIVPKEWYGEGTKYKFEDIELIGFDN YHEYLKYTYGDYMELPPVDSRKTHYRLESLKP >gi|304426606|gb|AEEM01000012.1| GENE 188 199672 - 200640 366 322 aa, chain + ## HITS:1 COG:no KEGG:LSA1578 NR:ns ## KEGG: LSA1578 # Name: not_defined # Def: putative teichoic acid/polysaccharide biosynthesis protein # Organism: L.sakei # Pathway: not_defined # 61 318 29 280 282 187 34.0 4e-46 MNKKFNSFFKIFKKVNGVNIIKQYVKTGVFFFAVFQILSQGFSKKSLEIVRNSVDNKILN KLRRKYTPYIIKNKQRILNSSTNRKSSDKVWVMWLQGMSNAPEIVKVCYNSLVNNLTDKD IILLTEENYRNYVTFPEFIQTKIDKGLIGKAHMSDLLRLELLENYGGTWVDATVFISDRN IPDFIFNSNFFMYQKLKPALDGNPLSVSNWFITSTTNNPILMMTRELLYEYWRKHNSAIH YFIFHMFFQLVVENFNDEWKKVVPISSAMPHVLLLRLFDNYEEEMLDAIFYQTSIHKLTY KFSKEKQNQPDTYYQKIVKDNK >gi|304426606|gb|AEEM01000012.1| GENE 189 200637 - 201782 572 381 aa, chain + ## HITS:1 COG:CC0633 KEGG:ns NR:ns ## COG: CC0633 COG3754 # Protein_GI_number: 16124886 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis protein # Organism: Caulobacter vibrioides # 4 377 221 564 818 241 36.0 2e-63 MKARVIAFYLPQFHPTVENDKFWGKGFTEWTNVAKAKPLFRGHNQPRIPADLGFYDLRMP EIREEQAKLAKEAGIEGFCYWHYWFGNGVRTLERPFNEVLESKEPDFPFCLGWANHSWTT KTWAKDKSRSDDTMIFEQKYPGVEDYKKHFYEILPALKDKRYITVDGKPLFYVWDPNNLP NPKEFVDLWKKMAYENGLPGMYFVAKVDPLGTLGFDNIKNVEENFQNEYQKILDVGFDAI NSHTLKYAELNANGKIKKVFYALVRKYFSSVFVEKYKYKDIIRSFNTKEDFQENIYPQLI PGRDRSPRSGKKAVIYYENTPEEFRIAVKNAISCVEKRNPEHRIIFLNSWNEWAEGAYME PDTTYGKRYIQVLREELEDDE >gi|304426606|gb|AEEM01000012.1| GENE 190 201772 - 204312 955 846 aa, chain + ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 8 219 5 217 344 117 34.0 8e-26 MMNKKVKISIVVPVYNQEKYLDISIPSLLSQTYTNIEIIIVNDGSIDSSDEIIEKYSSND NRIKVIEKNNGGLVDATIYGIKNATGDYVAFLDPDDRVDSDFIENFINELTEGADIISMG YYLDNLGTLTPCYLYKTGIYTGEKLKELTRNFIYESGNISVSNKIFISRWNKLYRAELVK EVIKDFEACKDISLGEDTIFTSLVLNKSKKVKVIEYPNSYFYNIGNQNSMMNSSDIRAGI QKSRIAYNKIKQLSNISEDQALALYFFLIENLFQKKKKVMDKSFDELFKYLKKDTLYQKA LSQMVIGCSNKIKKIELNSRKLLTGNQYMFCFSTLSNIKSLAKFFLREIPSRIQDIRKSG FYKAYRFAEYRKDRRNAREDLINKLPIVEQEVLPFLKKYVGKSTPVEETALSKNIFVFWW DGFESAPNIVRKCLESVKKYNPDSNIIEVSKNNFEDYTDIHPEILKGFYKGDISIQTFSD ILRFNLLKNNGGAWIDATILFLEKFDIFEELKDKSFATISFTSSMNFLKYKNEVCSWSGY FIASRKGGYFVTVMNDLFEEYYLLYGKFPFYFFIDALFVICKINKIDNDVLSKTKFVCAD MFLLPKLYDKDFNIYSLKQLTKIPQKLSWSHKGNSKLTNSFFNSLRIIGDIMKEYIFKVF HPIIIFNKLSWLINKKKLKKVGTHVSIGPFYEFKGSKFISLGNGVVARKFLKLHVWESYR GKNFFNTPNLLIGNYTSFGDNCYITCANKIVIGNNVLIGDNVFITDNFHGRSSKNECNIP PAERELWSKGPVIVEDNVWIGRNVSIMPDVTIGRGTVIGANSVVTKDIPEFSVVVGSPAR VIRKIM >gi|304426606|gb|AEEM01000012.1| GENE 191 204323 - 205513 431 396 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|68643233|emb|CAI33515.1| ## NR: gi|68643233|emb|CAI33515.1| oligosaccharide repeat unit polymerase Wzy [Streptococcus pneumoniae] # 2 382 9 390 397 202 33.0 3e-50 MIKIQKNVLIAFLALIIFFEPTYISILPHEGILYNILKLITALFIFIYFIKRKKTLSISQ ILVLVGELIVLIFTILNNGQIESEFLNFIMLGTLVLLIELYSDDFISLLEALMLHFELCI YINLGSLILFPERLFSRSNVAYGATYEWFLGSRNSFISWLLPGLIIALIYRFYKRKSKRW LCLVVGILVTQLFQTSSTLIVSSAIILCLAVIPYFNRVFRPTISFCVSMVIQFVIVILNN VKFLAPIVEGILGKNLTFTNRTTIWKNAINHTSIFRGYGKLQSTQVAEILGNFGNYIWKG ATHAHNQLLNLGFQGGVILVVITLIIYYIAFWKLEHFWNNPIARVYSFGLFAYIIAGYTE VTNHLLLQLIVILPLIIEKTIITVDDNIQFKRIILK >gi|304426606|gb|AEEM01000012.1| GENE 192 205510 - 206940 344 476 aa, chain + ## HITS:1 COG:SMb21050 KEGG:ns NR:ns ## COG: SMb21050 COG2244 # Protein_GI_number: 16264377 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Sinorhizobium meliloti # 1 462 37 500 517 161 23.0 2e-39 MINSKKNVIKGLFWTLSERFMSQIVSVIVTIVLTRLLAPEDYGVVSIVTVIITILNVFMT SGFSASLIQQEDVEQIDYSTVLYFSILLGFLLYVGVFAISPMLAAFYSLPQLELVLKILA LKIPLSALNSVQQAYVSRNMLFKKFFISTVTATVVSGIIGVVMAYTNFGVWALVAQDLSN VVTISVVLWFSVGWRPTLQFSFKRLKILFDFGIKIFIQTLFNTIYANIRSLLIGGFYSPA DLAYYTKGNQYPNLIVTNVDTAVSKTMFPVMSREQSDLDRIKVLTKRTAQVSSYIMSPIL IGFFVCAKQIVSVVMTDKWLPAVPYIRIICICLLIRASQTAILQAIKSIGRSDIVLKMDI PVRILALIILMFTIRFGVIYIAISEIIIEFLALLIYSYYSSKLLNYSYLEIFGDFLKNVI LAVIMGGVVYFIGVASGLNMLLTLIIQIVIGGIIYIVLSILLKNESWLLFNLTIKK >gi|304426606|gb|AEEM01000012.1| GENE 193 207239 - 208450 1326 403 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0962 NR:ns ## KEGG: GALLO_0962 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 403 1 403 403 619 100.0 1e-176 MENTNSNNHRLLIQKLLVSIHYLTLFRDEIVLVEKTPSLLGASFSPYVVQSELGEILAAV DALSKQEKLIKSTFWYDEASFRLMNHSLDIVGNWIRGIDNVLEICESKSVFQAILGDKRQ RVFGVLIDVFTSIRITNLSIKEESEYPILVDPLQAVEYQKRETKKAELLAKIDALTPRKS EQSLEVDKDKDVRDAPILENKEDELVAEPQSVEPEVDEEEPSDDVEEEVASVQPEVADAT ESVAEVEEEFKETESVSDAPLATLLDEEESELELTEISREAAIKQFRHYLFDHKGMIYVA DAQDDLKREIKFYNAFDRFEGAFDEISDILVLMEKILEDLEERDEETFDDEGNLTSEPTE PIYLLIYGQNLLMEDSRFESLLSELQHFSNRSDLHISAYKAYE Prediction of potential genes in microbial genomes Time: Sun May 29 12:37:01 2011 Seq name: gi|304426473|gb|AEEM01000013.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00023, whole genome shotgun sequence Length of sequence - 142563 bp Number of predicted genes - 138, with homology - 130 Number of transcription units - 67, operones - 36 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 114 - 284 117 ## GALLO_0965 hypothetical protein - Prom 314 - 373 10.5 + Prom 405 - 464 10.9 2 2 Op 1 13/0.000 + CDS 620 - 1426 1055 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 3 2 Op 2 5/0.000 + CDS 1436 - 2380 1351 ## COG0167 Dihydroorotate dehydrogenase + Term 2556 - 2586 3.0 + Prom 2391 - 2450 6.7 4 3 Op 1 . + CDS 2600 - 3292 830 ## COG0284 Orotidine-5'-phosphate decarboxylase 5 3 Op 2 . + CDS 3337 - 3660 411 ## COG0221 Inorganic pyrophosphatase 6 3 Op 3 . + CDS 3675 - 4304 932 ## COG0461 Orotate phosphoribosyltransferase + Term 4321 - 4360 6.1 7 4 Op 1 . + CDS 4383 - 4883 730 ## COG1881 Phospholipid-binding protein 8 4 Op 2 . + CDS 4901 - 5554 595 ## COG0692 Uracil DNA glycosylase 9 4 Op 3 . + CDS 5567 - 6289 547 ## GALLO_0973 hypothetical protein 10 4 Op 4 . + CDS 6297 - 7568 1471 ## COG0044 Dihydroorotase and related cyclic amidohydrolases + Term 7574 - 7608 4.5 - Term 7517 - 7545 -0.0 11 5 Tu 1 . - CDS 7588 - 8226 689 ## COG0344 Predicted membrane protein - Prom 8406 - 8465 8.9 + Prom 8365 - 8424 10.4 12 6 Op 1 24/0.000 + CDS 8447 - 10396 2196 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 10418 - 10465 -0.1 + Prom 10409 - 10468 8.4 13 6 Op 2 2/0.200 + CDS 10492 - 12951 3522 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 12957 - 12995 6.6 + Prom 12996 - 13055 5.9 14 7 Op 1 . + CDS 13078 - 14100 1275 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 14110 - 14137 0.1 15 7 Op 2 . + CDS 14167 - 14397 393 ## GALLO_0980 hypothetical protein + Term 14492 - 14562 13.1 + TRNA 14459 - 14539 65.0 # Tyr GTA 0 0 + TRNA 14573 - 14647 65.2 # Gln TTG 0 0 + Prom 14572 - 14631 80.4 16 8 Tu 1 . + CDS 14772 - 15968 1850 ## PROTEIN SUPPORTED gi|15674934|ref|NP_269108.1| 30S ribosomal protein S1 + Term 15979 - 16017 7.2 + TRNA 16040 - 16111 48.8 # Arg CCG 0 0 - Term 16492 - 16524 2.5 17 9 Op 1 23/0.000 - CDS 16543 - 17238 615 ## COG1346 Putative effector of murein hydrolase 18 9 Op 2 . - CDS 17231 - 17611 472 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 17702 - 17761 4.0 - Term 17741 - 17774 2.3 19 10 Tu 1 . - CDS 17784 - 18326 370 ## COG0398 Uncharacterized conserved protein - Prom 18395 - 18454 5.7 - Term 18981 - 19011 2.0 20 11 Op 1 . - CDS 19015 - 19788 643 ## GALLO_0985 putative ABC transporter, permease protein 21 11 Op 2 8/0.000 - CDS 19797 - 20495 226 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 22 11 Op 3 . - CDS 20497 - 20865 600 ## COG1725 Predicted transcriptional regulators 23 11 Op 4 . - CDS 20883 - 20954 79 ## - Prom 20987 - 21046 6.9 + Prom 20956 - 21015 7.3 24 12 Tu 1 3/0.150 + CDS 21043 - 24150 2869 ## COG0587 DNA polymerase III, alpha subunit + Prom 24153 - 24212 8.8 25 13 Op 1 12/0.000 + CDS 24241 - 25257 1635 ## COG0205 6-phosphofructokinase + Prom 25259 - 25318 3.0 26 13 Op 2 1/0.350 + CDS 25339 - 26841 1949 ## COG0469 Pyruvate kinase + Term 26858 - 26904 -0.5 27 14 Tu 1 . + CDS 27210 - 27767 469 ## COG0681 Signal peptidase I + Prom 27818 - 27877 8.6 28 15 Op 1 . + CDS 27964 - 29778 2533 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 29 15 Op 2 . + CDS 29796 - 29909 100 ## + Term 29997 - 30036 -0.1 + Prom 30223 - 30282 5.6 30 16 Op 1 4/0.050 + CDS 30304 - 32073 2360 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 31 16 Op 2 5/0.000 + CDS 32099 - 34051 1744 ## COG3711 Transcriptional antiterminator 32 16 Op 3 15/0.000 + CDS 34054 - 34491 549 ## COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain 33 16 Op 4 . + CDS 34510 - 35655 1273 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases + Term 35685 - 35713 2.3 + Prom 35729 - 35788 6.9 34 17 Tu 1 . + CDS 35844 - 36176 360 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Term 36181 - 36223 3.4 + Prom 36282 - 36341 7.7 35 18 Op 1 34/0.000 + CDS 36362 - 37003 594 ## COG0765 ABC-type amino acid transport system, permease component 36 18 Op 2 16/0.000 + CDS 37015 - 37644 389 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 37 18 Op 3 . + CDS 37668 - 38510 1044 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 38520 - 38562 8.1 - Term 38514 - 38545 3.4 38 19 Tu 1 . - CDS 38606 - 39823 1184 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 39888 - 39947 7.9 + Prom 39638 - 39697 2.9 39 20 Tu 1 . + CDS 39768 - 39968 109 ## 40 21 Tu 1 . - CDS 39997 - 41325 1334 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 41462 - 41521 7.7 + Prom 41690 - 41749 6.6 41 22 Op 1 . + CDS 41776 - 43239 1830 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 43246 - 43289 7.8 42 22 Op 2 1/0.350 + CDS 43303 - 43917 430 ## COG0406 Fructose-2,6-bisphosphatase 43 22 Op 3 1/0.350 + CDS 43920 - 44543 552 ## COG0406 Fructose-2,6-bisphosphatase 44 22 Op 4 . + CDS 44536 - 45138 489 ## COG0406 Fructose-2,6-bisphosphatase + Prom 45167 - 45226 5.1 45 23 Op 1 . + CDS 45247 - 46365 1268 ## COG0628 Predicted permease 46 23 Op 2 . + CDS 46372 - 47211 633 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 47 23 Op 3 . + CDS 47258 - 47938 645 ## COG2003 DNA repair proteins - Term 48018 - 48055 5.3 48 24 Tu 1 . - CDS 48088 - 48735 700 ## COG2344 AT-rich DNA-binding protein - Prom 48791 - 48850 7.1 - Term 48811 - 48859 5.1 49 25 Op 1 . - CDS 48881 - 49228 492 ## GALLO_1011 hypothetical protein 50 25 Op 2 2/0.200 - CDS 49230 - 50345 1372 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 51 25 Op 3 2/0.200 - CDS 50353 - 51324 1153 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 51348 - 51407 7.7 52 25 Op 4 . - CDS 51410 - 51979 537 ## COG4116 Uncharacterized protein conserved in bacteria - Prom 52030 - 52089 8.3 + Prom 51969 - 52028 9.3 53 26 Op 1 6/0.000 + CDS 52112 - 52777 856 ## COG2357 Uncharacterized protein conserved in bacteria 54 26 Op 2 7/0.000 + CDS 52752 - 53588 940 ## COG0061 Predicted sugar kinase 55 26 Op 3 2/0.200 + CDS 53585 - 54475 324 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 56 26 Op 4 . + CDS 54492 - 55490 1359 ## COG0280 Phosphotransacetylase + Term 55507 - 55541 1.1 57 27 Tu 1 . + CDS 55558 - 56313 894 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity + Term 56318 - 56344 -1.0 - Term 56305 - 56331 -1.0 58 28 Tu 1 . - CDS 56344 - 56742 380 ## GALLO_1020 hypothetical protein - Prom 56874 - 56933 4.4 + Prom 56626 - 56685 7.5 59 29 Tu 1 . + CDS 56915 - 57754 1059 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 57757 - 57808 2.4 + Prom 57784 - 57843 4.2 60 30 Tu 1 . + CDS 57921 - 59339 1668 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 59355 - 59407 7.1 - Term 59346 - 59389 4.5 61 31 Op 1 36/0.000 - CDS 59398 - 60054 266 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 62 31 Op 2 . - CDS 60068 - 61618 1831 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 61728 - 61787 7.3 + Prom 61756 - 61815 10.9 63 32 Tu 1 . + CDS 62005 - 62988 1281 ## COG0516 IMP dehydrogenase/GMP reductase + Term 63006 - 63040 1.0 64 33 Tu 1 . - CDS 63039 - 63677 717 ## COG1182 Acyl carrier protein phosphodiesterase - Prom 63703 - 63762 4.8 + Prom 63656 - 63715 6.1 65 34 Op 1 . + CDS 63760 - 64698 945 ## COG2378 Predicted transcriptional regulator 66 34 Op 2 . + CDS 64715 - 65257 376 ## COG3548 Predicted integral membrane protein + Term 65317 - 65378 2.7 + Prom 65535 - 65594 5.9 67 35 Op 1 7/0.000 + CDS 65630 - 66211 880 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 68 35 Op 2 . + CDS 66177 - 67493 442 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 67496 - 67551 12.2 - Term 67490 - 67530 2.1 69 36 Tu 1 . - CDS 67542 - 68453 691 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis - Prom 68505 - 68564 6.8 - Term 68549 - 68587 5.5 70 37 Tu 1 . - CDS 68615 - 68800 381 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog - Prom 68827 - 68886 5.5 71 38 Tu 1 . - CDS 68988 - 69113 180 ## - Prom 69153 - 69212 4.2 72 39 Op 1 3/0.150 + CDS 69582 - 70163 621 ## COG1435 Thymidine kinase 73 39 Op 2 32/0.000 + CDS 70202 - 71281 1518 ## COG0216 Protein chain release factor A 74 39 Op 3 10/0.000 + CDS 71281 - 72111 253 ## PROTEIN SUPPORTED gi|187924448|ref|YP_001896090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 75 39 Op 4 1/0.350 + CDS 72104 - 72703 590 ## COG0009 Putative translation factor (SUA5) + Prom 72711 - 72770 3.5 76 40 Op 1 . + CDS 72807 - 74057 1541 ## COG0112 Glycine/serine hydroxymethyltransferase 77 40 Op 2 . + CDS 74102 - 75079 907 ## GALLO_1039 hypothetical protein 78 40 Op 3 1/0.350 + CDS 75079 - 75681 537 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 79 40 Op 4 35/0.000 + CDS 75721 - 77445 184 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 80 40 Op 5 . + CDS 77447 - 79183 175 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Term 79275 - 79323 9.4 - Term 79266 - 79306 5.1 81 41 Tu 1 . - CDS 79322 - 80776 1282 ## COG0366 Glycosidases - Prom 80914 - 80973 6.2 + Prom 80844 - 80903 5.3 82 42 Tu 1 . + CDS 80930 - 81544 303 ## GALLO_1044 hypothetical protein - Term 81538 - 81587 7.2 83 43 Tu 1 . - CDS 81589 - 82197 277 ## COG0398 Uncharacterized conserved protein - Prom 82218 - 82277 5.4 + Prom 82654 - 82713 10.6 84 44 Op 1 2/0.200 + CDS 82870 - 83682 597 ## COG3711 Transcriptional antiterminator 85 44 Op 2 13/0.000 + CDS 83702 - 84025 476 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 86 44 Op 3 8/0.000 + CDS 84018 - 85721 2045 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Term 85733 - 85796 11.0 87 45 Op 1 . + CDS 85809 - 87215 1209 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 88 45 Op 2 . + CDS 87118 - 87297 72 ## + Term 87325 - 87353 0.7 89 45 Op 3 . + CDS 87361 - 88923 2039 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 88929 - 88971 4.5 + Prom 89050 - 89109 2.6 90 46 Tu 1 . + CDS 89213 - 89314 87 ## + Prom 89421 - 89480 7.9 91 47 Tu 1 . + CDS 89643 - 92030 1397 ## COG4694 Uncharacterized protein conserved in bacteria + Prom 92042 - 92101 5.0 92 48 Op 1 . + CDS 92285 - 92494 190 ## HMPREF0424_0732 hydrolase, NUDIX family + Prom 92503 - 92562 2.1 93 48 Op 2 . + CDS 92650 - 92763 63 ## gi|171779382|ref|ZP_02920346.1| hypothetical protein STRINF_01227 + Term 92785 - 92820 3.5 + Prom 92850 - 92909 9.1 94 49 Op 1 . + CDS 92948 - 93163 266 ## GALLO_1052 putative transcriptional regulator, AbrB family 95 49 Op 2 . + CDS 93253 - 94554 1018 ## COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase + Term 94586 - 94633 7.5 + Prom 94766 - 94825 5.4 96 50 Op 1 1/0.350 + CDS 94851 - 95741 338 ## COG1396 Predicted transcriptional regulators 97 50 Op 2 . + CDS 95781 - 100073 4968 ## COG5263 FOG: Glucan-binding domain (YG repeat) 98 50 Op 3 . + CDS 100103 - 100369 291 ## GALLO_1055 putative glucosyltransferase + Term 100421 - 100489 17.8 + Prom 100463 - 100522 5.9 99 51 Op 1 1/0.350 + CDS 100718 - 101581 366 ## COG1396 Predicted transcriptional regulators + Term 101620 - 101654 2.1 + Prom 101589 - 101648 5.2 100 51 Op 2 . + CDS 101674 - 106311 5723 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 106343 - 106380 -0.4 + Prom 106323 - 106382 5.0 101 52 Tu 1 . + CDS 106480 - 108162 1825 ## GALLO_1058 putative glucan-binding protein, peptidoglycan linked (LPXTG motif) + Prom 108190 - 108249 5.0 102 53 Op 1 . + CDS 108375 - 109598 1024 ## COG0534 Na+-driven multidrug efflux pump + Prom 109603 - 109662 3.0 103 53 Op 2 . + CDS 109689 - 110963 378 ## GALLO_1060 hypothetical protein 104 53 Op 3 . + CDS 111020 - 111181 282 ## GALLO_1061 hypothetical protein + Term 111202 - 111251 4.2 + Prom 111210 - 111269 8.1 105 54 Tu 1 . + CDS 111325 - 113073 1048 ## COG3410 Uncharacterized conserved protein + Prom 113488 - 113547 4.9 106 55 Op 1 2/0.200 + CDS 113574 - 115256 834 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family 107 55 Op 2 . + CDS 115253 - 117082 555 ## COG0210 Superfamily I DNA and RNA helicases 108 55 Op 3 . + CDS 117145 - 117843 621 ## COG2188 Transcriptional regulators + Term 117849 - 117888 5.1 + Prom 117859 - 117918 5.7 109 56 Op 1 . + CDS 117947 - 118222 310 ## GALLO_1066 hypothetical protein 110 56 Op 2 . + CDS 118224 - 118532 490 ## GALLO_1067 hypothetical protein 111 56 Op 3 . + CDS 118522 - 118935 331 ## GALLO_1068 hypothetical protein 112 56 Op 4 . + CDS 118954 - 120207 1257 ## GALLO_1068 hypothetical protein 113 56 Op 5 . + CDS 120227 - 120790 458 ## GALLO_1069 hypothetical protein 114 56 Op 6 . + CDS 120837 - 121430 456 ## GALLO_1070 hypothetical protein + Term 121520 - 121553 -0.1 - Term 121544 - 121606 8.1 115 57 Tu 1 . - CDS 121613 - 122461 718 ## COG1737 Transcriptional regulators - Prom 122496 - 122555 7.0 + Prom 122532 - 122591 6.9 116 58 Op 1 . + CDS 122631 - 123614 1015 ## COG0673 Predicted dehydrogenases and related proteins 117 58 Op 2 . + CDS 123619 - 124143 367 ## GALLO_1073 hypothetical protein 118 58 Op 3 . + CDS 124164 - 125222 1014 ## COG0673 Predicted dehydrogenases and related proteins + Term 125459 - 125495 1.0 119 59 Op 1 6/0.000 - CDS 125292 - 125549 287 ## COG4115 Uncharacterized protein conserved in bacteria 120 59 Op 2 . - CDS 125542 - 125808 410 ## COG2161 Antitoxin of toxin-antitoxin stability system - Prom 125838 - 125897 7.1 + Prom 125791 - 125850 7.1 121 60 Op 1 8/0.000 + CDS 125972 - 126304 327 ## COG2739 Uncharacterized protein conserved in bacteria 122 60 Op 2 . + CDS 126375 - 127940 2198 ## COG0541 Signal recognition particle GTPase + Term 127957 - 127995 4.3 - Term 127945 - 127983 5.2 123 61 Tu 1 . - CDS 128006 - 129022 578 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 129130 - 129189 7.9 + Prom 129019 - 129078 7.7 124 62 Op 1 35/0.000 + CDS 129196 - 130935 219 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 125 62 Op 2 . + CDS 130932 - 132665 1505 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 126 62 Op 3 . + CDS 132680 - 133267 697 ## GALLO_1082 conserved hypothetitical protein + Term 133297 - 133339 4.1 127 63 Op 1 . + CDS 133370 - 133627 154 ## GALLO_1083 putative ABC transporter, permease protein 128 63 Op 2 34/0.000 + CDS 133660 - 134037 237 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 129 63 Op 3 15/0.000 + CDS 134030 - 134590 182 ## PROTEIN SUPPORTED gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 130 63 Op 4 . + CDS 134596 - 135423 688 ## COG1122 ABC-type cobalt transport system, ATPase component + Term 135462 - 135504 6.1 + Prom 135656 - 135715 8.0 131 64 Tu 1 . + CDS 135742 - 136812 1118 ## COG0582 Integrase + Term 136820 - 136855 1.0 - Term 136808 - 136841 3.1 132 65 Tu 1 . - CDS 136918 - 137598 822 ## COG2932 Predicted transcriptional regulator - Prom 137621 - 137680 9.4 - Term 137643 - 137679 4.8 133 66 Op 1 40/0.000 - CDS 137682 - 138629 654 ## COG0642 Signal transduction histidine kinase 134 66 Op 2 5/0.000 - CDS 138626 - 139288 460 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Term 139295 - 139323 -0.9 135 66 Op 3 36/0.000 - CDS 139376 - 141355 1341 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 136 66 Op 4 . - CDS 141357 - 142109 763 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 142147 - 142206 5.7 137 67 Op 1 . - CDS 142211 - 142318 125 ## 138 67 Op 2 . - CDS 142337 - 142456 143 ## - Prom 142480 - 142539 5.2 Predicted protein(s) >gi|304426473|gb|AEEM01000013.1| GENE 1 114 - 284 117 56 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0965 NR:ns ## KEGG: GALLO_0965 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 56 1 56 56 86 96.0 2e-16 MQDYYTPKGKHLSLTYRRNVERQLQEGHFVAKTLSVLKFNTIQNYQNSHLFLNHHF >gi|304426473|gb|AEEM01000013.1| GENE 2 620 - 1426 1055 268 aa, chain + ## HITS:1 COG:SP0963 KEGG:ns NR:ns ## COG: SP0963 COG0543 # Protein_GI_number: 15900840 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Streptococcus pneumoniae TIGR4 # 18 268 3 250 250 333 63.0 2e-91 MNPSCKNKPLVLKEDLFIVSQREIAPRIFEMTLSGEMVLDMAPGQFLHLRVPDPSKLLRR PISICQIDKVNKVATIVYRVERAGTAILSQMKAGDRVDTMGPQGNGFDLSVVTSGQKALL IGGGIGVPPLVETAKQLAVKGVDVTSVLGFANKEAVILEEELSAYGKVYVTTDDGSYGIK GYVSTVVDDLVQNETYDAIYSCGAPGMLKYVDQKFENHPHAYLSMESRMACGMGACYACV VHLKNAQEAANKRVCEDGPVFETGKIIL >gi|304426473|gb|AEEM01000013.1| GENE 3 1436 - 2380 1351 314 aa, chain + ## HITS:1 COG:SP0964 KEGG:ns NR:ns ## COG: SP0964 COG0167 # Protein_GI_number: 15900841 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 312 1 312 312 508 83.0 1e-144 MSENRLAVSLPGLDLKNPIIPASGCFGFGQEYAKYYDLDKLGSIMIKATTKDARFGNPTP RVAETPSGMLNAIGLQNPGVDVVLAEKLPWLAQHYPDLPIIANVAGFSNDEYAYVSEKIS KAPNVKAIELNISCPNVDHGNHGLLIGQVPELAYAAVKASVEHSDVPVYVKLTPSVADIT TVAKAVEEAGATGFTMINTLVGMRFDLKTRKPIIANGTGGMSGPAVFPVALKLIRQVAQS TDLPIIGMGGVDSAEAAIEMMIAGASAIGVGTANFADPYACPNIIDRLPEVMDKYGIENL ETLRREVRQELRGK >gi|304426473|gb|AEEM01000013.1| GENE 4 2600 - 3292 830 230 aa, chain + ## HITS:1 COG:SP0701 KEGG:ns NR:ns ## COG: SP0701 COG0284 # Protein_GI_number: 15900600 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 228 1 228 233 367 81.0 1e-102 MHESRPIIALDFPSFDDVKSFLALFPADEKLYVKIGMELYYAAGPEIVRYVKSLGHSVFL DLKLHDIPNTVKSAMRVLSNLGVDMTNVHAAGGVEMMKAAREGLGQGPKLIAVTQLTSTS DEQMKADQNIQTSLVESVLHYAKKANEAGLDGVVCSAREVAVIKDATSEDFVCLTPGIRP AGAAVGDQKRVMTPSQASAIGSSYIVVGRPITKADDPVAAYKAIYDEWNA >gi|304426473|gb|AEEM01000013.1| GENE 5 3337 - 3660 411 107 aa, chain + ## HITS:1 COG:lin0358 KEGG:ns NR:ns ## COG: lin0358 COG0221 # Protein_GI_number: 16799435 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Listeria innocua # 2 107 18 123 123 126 51.0 1e-29 MRQSYTAVIDRPIGYQDRYGNNYPINYGYIPNLIGGDGEWQDVYIISENVSAPLEVFEGE LVAIIHRADDVETKWILTTAGETVTYDQIKQATHFLEQYFTSTIELL >gi|304426473|gb|AEEM01000013.1| GENE 6 3675 - 4304 932 209 aa, chain + ## HITS:1 COG:SPy0901 KEGG:ns NR:ns ## COG: SPy0901 COG0461 # Protein_GI_number: 15674923 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 208 1 208 209 344 84.0 7e-95 MTLASQIASDLLDIRAVYLKPNDPFTWASGIKSPIYTDNRVTLSYPETRTLIENGFVEKI KEEFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVTKGQKMVV VEDLISTGGSVLEAVAAAEREGADVIGVVAIFTYELPKATENFEKAGVKLVTLSNYTELI KVAKVQGYITADDLQLLHKFKENQETWRD >gi|304426473|gb|AEEM01000013.1| GENE 7 4383 - 4883 730 166 aa, chain + ## HITS:1 COG:SA0840 KEGG:ns NR:ns ## COG: SA0840 COG1881 # Protein_GI_number: 15926569 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Staphylococcus aureus N315 # 1 165 1 169 171 167 49.0 6e-42 MKLSCTFEDNILPDAYAKKAKVQVKGNAVISFPFTIEDVPEKTKSFAWTFVDYDSIPVCG FAYIHWVVANVSADVTVISEDFSRLDNKHAHGKNSLVSKLLNEDYSDIDEGYMGPYPPDK DHIYTLTVYALDCELPLANGFYMNELLHAMEGHVLAKEKLDLVGKY >gi|304426473|gb|AEEM01000013.1| GENE 8 4901 - 5554 595 217 aa, chain + ## HITS:1 COG:SPy0905 KEGG:ns NR:ns ## COG: SPy0905 COG0692 # Protein_GI_number: 15674927 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Streptococcus pyogenes M1 GAS # 1 217 1 217 217 344 74.0 8e-95 MQHSTWHELIKKELPEHYFGKINQFMDYVYQQELIYPPREKVFNAIQTTPLEDVKVVIIG QDPYHGPNQAQGLSFSVPENIPAPPSLQNILKELSDDLGQRDHHDLTPWAQQGVLLLNAC LTVPAGRANGHAGQIWEPFTDAIIKVVNQKETPVVFILWGGYARKKKALITNPIHHVIES AHPSPLSAYRGFFGSHPFSRANAYLTQDGLEAIDWLK >gi|304426473|gb|AEEM01000013.1| GENE 9 5567 - 6289 547 240 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0973 NR:ns ## KEGG: GALLO_0973 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 240 1 240 240 472 98.0 1e-132 MIYFLASNPIIYEKRRLNPANAFVNLLKEHLPSKFSALFVCSDPNDNTFTDQYAADVKTA FEAEGMTFEKYAVLDNRTANQASSLVAEADLIFLAGGHVPTQNAFLNSVGMRELLQSSDK LVIGSSAGSMNAAELVYAQPEEAGEAISKDYQRFLAGLGITQVQLIPHYQETKHHMLDGL RVFEDITYPDSNGRCFYAICDGSFLYGNGTVEMIYGEAYRIKNGALSQINAENETYQFRK >gi|304426473|gb|AEEM01000013.1| GENE 10 6297 - 7568 1471 423 aa, chain + ## HITS:1 COG:SPy0907 KEGG:ns NR:ns ## COG: SPy0907 COG0044 # Protein_GI_number: 15674928 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Streptococcus pyogenes M1 GAS # 1 420 1 420 422 636 79.0 0 MLLIKNGRVVDPKSGFDQVADVLVDGKKIIKIADSIEEASAEIIDATGLVVAPGLVDIHV HFREPGQTHKEDIHTGALAAAAGGFTSVVMMANTNPTISDVKTLKEVLASAAKEDVHVYT NATVTKNFDGQHLTDFKALLENGALSFSDDGIPLQSTKVLKEALDLAKANNTFVAVHEED PELNGILGFNEHIARDKFHFCGATGVAEYSMIARDVMIAYDRGAHLHIQHLSKAESVKVV EFAQQLGANVTAEAAPQHFSKTEDLLLIKGSAAKMNPPLRTEKDRLAVIEGLKSGVISVI ATDHAPHHADEKNVDDITKAPSGMTGLETSLSLGLTNLVATGDLTLSELLAKMTINPSSM YDFDAGYLAENGPADIVIFADKEERIVSDHFASKASNSPFIGEKLQGVVKYTICDGKIVY QAS >gi|304426473|gb|AEEM01000013.1| GENE 11 7588 - 8226 689 212 aa, chain - ## HITS:1 COG:SPy0908 KEGG:ns NR:ns ## COG: SPy0908 COG0344 # Protein_GI_number: 15674929 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 209 1 209 213 263 72.0 2e-70 MKILVLIVIAYLLGSIPTGLWIGKFFYHVNLREHGSGNTGTTNTFRVLGPKAGTVTFIID MLKGTVATLLPHILGVTAVSPILIGLFAIIGHTFPIFAKFKGGKAVATSAGVLLGFAPMF LLYLLIIFVGTLYLFSMISLSSVVAAAVAVVSVLIFPAFGFLLPHYDLLFTLIIVLIASI IIIRHKDNITRIRKHEENLVPWGLNLSKQKVD >gi|304426473|gb|AEEM01000013.1| GENE 12 8447 - 10396 2196 649 aa, chain + ## HITS:1 COG:SP0852 KEGG:ns NR:ns ## COG: SP0852 COG0187 # Protein_GI_number: 15900737 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 649 1 647 647 1136 90.0 0 MAKKEINVNNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLVWEIVDNAVDEALSGF GNQIDVIINSDGSVTVSDQGRGMPTGKHAMGIPTVEVIFTVLHAGGKFGQGGYKTSGGLH GVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKIGTAPKSKSGTKVTFMPDD TIFSTIDFKFNTIAERLKESAFLLKDVTLTLTDNRPEEAEHLEFHYENGVQDFVEYLNED KETLTPVISVTGEDQNFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKAM NDYARKSGLLKEKDKNLEGSDYREGLSAVLSILVPEEHLQFEGQTKDKLGSPLARPIVDG IVSEKLTYFLLENGEIASNLVRKAIKARDAREAARKARDESRNGKKNKKDKGLLSGKLTP AQSKNPKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTAKAKMSDIVKNEEINT MIYTIGAGVGAEFNVENSNYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVETGHVYIA LPPLYKMSKGKGKKEQVEYAWTDGELEELRQKFGKGAQLQRYKGLGEMNADQLWETTMNP ETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEENTVF >gi|304426473|gb|AEEM01000013.1| GENE 13 10492 - 12951 3522 819 aa, chain + ## HITS:1 COG:SP0855 KEGG:ns NR:ns ## COG: SP0855 COG0188 # Protein_GI_number: 15900740 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 819 1 816 823 1297 80.0 0 MSNVQNMSLEDIMGDRFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNKDGNTFDKGFR KSAKSVGNVMGNFHPHGDSSIYDAMVRMSQDWKNRATLIEMHGNNGSMDGDPPAAMRYTE ARLSEIAGYLLHDIDKDTVPFAWNFDDTEKEPTVLPAAFPNLLVNGATGISAGYATDIPP HNLAEVIDAVVYLIDHPNAKLDKLMEFLPGPDFPTGAIIQGKDGIRKAYETGKGRVVVRS RTDIESLKGGKKQIVVTEIPYEVNKAVLVKKIDDVRVNNKVPGIAEVRDESDRDGLRIAI ELKKDADEQTVLNYLLKYTDLQVNYNFNMVAIDNYTPRQVGIIPMLTSYIAHRKAIIVAR SKFDKEKAEKRLHIVEGLIRVISILDDVIALIRASENKADAKENLKVSYEFSEEQAEAIV TLQLYRLTNTDIVTLENEEAELRERITMLKAIIGDERTMYNVMKRELREVKKKFATPRLT ELQAEAETIEIDVASLIVEEDTFVSVTKGGYIKRTSPRSYNASTVEEIGKRDDDELIFVA QAKTTQHLLIFTNLGNVIYRPIHELTDIRWKDIGEHLSQTITNFATDEYVLYAEIVDDFG SQTYFAATKLGQIKRFERKEFTPWRTYKSKSVKYAKLKNADDSVVTISPIALDDVMIVTH NGYALHFNIEEVPVVGAKAAGVKAINLKDDDFVASAFVANTDSFFILTQRGSLKRMATEL IPATSRANRGLQVLRELKSKPHRVFMAGPVHASNDVQNLDLFTISTVDSDDVETLEVHSN KGAVYQAILEDLNLSERTSNGSFISDKISDEGVFSARIK >gi|304426473|gb|AEEM01000013.1| GENE 14 13078 - 14100 1275 340 aa, chain + ## HITS:1 COG:SP0856 KEGG:ns NR:ns ## COG: SP0856 COG0115 # Protein_GI_number: 15900741 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 340 1 340 340 616 85.0 1e-176 MTVDLDWENLGFAYHKLPFRYISYYKDGKWDDGQLTEDATLHISEASPALHYGQQAFEGL KAYRTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTEKFIDAAKQVVRANEEFVPPYGTG ATLYLRPLLIGVGDIIGVHPADEYIFTIFAMPVGNYFKGGLVPTNFLIQDEYDRAAPNGT GAAKVGGNYAASLLPGKVAHDRKFSDVIYLDPATHTKIEEVGSANFFGITADNEFITPLS PSILPSITKYSLLYLAEHRFGMKAIQGDVKLDELDKFVEAGACGTAAVISPIGGVQHGDD FHVFYSETEVGPVTRKLYDELVGIQFGDIEAPEGWIYKVN >gi|304426473|gb|AEEM01000013.1| GENE 15 14167 - 14397 393 76 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0980 NR:ns ## KEGG: GALLO_0980 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 76 1 76 76 112 98.0 4e-24 MSKKDKKIEIQLADAKVEINNAKVEGYTLTAGKKIIGEIAELDGKFAIVKSGEVEAFFKT LEQTIESIIENYNLNR >gi|304426473|gb|AEEM01000013.1| GENE 16 14772 - 15968 1850 398 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674934|ref|NP_269108.1| 30S ribosomal protein S1 [Streptococcus pyogenes M1 GAS] # 1 398 1 401 401 717 93 0.0 MNEFEDLLNSVSEVNPGDVVTAEVLTVDNDQANVVIEGTGVEGVLTLRELTNDRDADIND FVKTGDTVEVLVLRQVVGKDTDTVTFLVSKKRLEARKAWDKLVGREGEVVTVKGTRAVKG GLSVEFEGLRGFIPASMIDTRFVRNTEKFVGQEFEAKIKEVVPAENRFILSRREVVEEKA AAARKEVFSKLEEGAIVKGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVG EEVEVKVLSIDEEAGRVSLSLKATTPGPWDGVEQKLAAGDVVEGKVKRLTDFGAFVEVLP GIDGLVHISQISHKRVENPKDVLSVGQEVNVKVLDVNAAAERVSLSIKALEERPAQAENE EKRQSRPRRPKREAKRDYELPETQTGFSMADLFGDIEL >gi|304426473|gb|AEEM01000013.1| GENE 17 16543 - 17238 615 231 aa, chain - ## HITS:1 COG:L171802 KEGG:ns NR:ns ## COG: L171802 COG1346 # Protein_GI_number: 15672743 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Lactococcus lactis # 1 230 1 230 232 222 60.0 6e-58 MNEVITNPIFGIMVSILAYLMGMLIFRRFPHPITTPLLLATFFIIAFLKISNISYADYYV GGSYLNTLIVPSTVALGIPLYRSFHLMKHHIRSILSGILIACIVNTTFTALIAKTFGIKY LLAISLFPKSVTTAMAVGITDKMGGITTVTLVVVVITGILTSVLGPVFLKLLKIDDPVAI GLSLGGTGHAIGTGTALKYGHVEGAMAGLAIGVTGIVYVIISPIVAQIILK >gi|304426473|gb|AEEM01000013.1| GENE 18 17231 - 17611 472 126 aa, chain - ## HITS:1 COG:L172519 KEGG:ns NR:ns ## COG: L172519 COG1380 # Protein_GI_number: 15672744 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Lactococcus lactis # 1 119 1 119 134 120 56.0 5e-28 MKLYVQFMIILVFSFIGEAISNLLHLPVPGSIIGLVLLFLALEFKIIRLRHIDVVGNFLL NNMTILFLPAAVGITEKFNDIKDYLLPITIIILGAIFLNVSVIGFVVQFIKKRFEGDYVD KGVRHE >gi|304426473|gb|AEEM01000013.1| GENE 19 17784 - 18326 370 180 aa, chain - ## HITS:1 COG:SPy1288 KEGG:ns NR:ns ## COG: SPy1288 COG0398 # Protein_GI_number: 15675241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 65 180 2 117 118 142 68.0 4e-34 MIGTLALVVWFYRLGILNDSNALKDFVQRHQFWGPLIFVLVQIFQVVFPVIPGGVTTVAG FLIFGPWLGFLYNYLGIIIGSIILFLLVRIYGRKFILLFVNEKTFYKYEARLETKGFETF FILCMLSPISPADVLVMITGLTRISLRRFILIIMLAKPISIISYSYIWIFGGDLIKMILH >gi|304426473|gb|AEEM01000013.1| GENE 20 19015 - 19788 643 257 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0985 NR:ns ## KEGG: GALLO_0985 # Name: not_defined # Def: putative ABC transporter, permease protein # Organism: S.gallolyticus # Pathway: not_defined # 1 257 1 257 257 399 100.0 1e-110 MFSKLLKYELKSVGKWYFALNASVIAISFFLGFSIRSLEAYAQNQSGINSAHFAQLIPII LALIFGVLVAGAWIATLVIIIRRFYKNVFGREGYLTLTLPVSSHQLILSKLLASFIWTVF NAIVLVIGITLLVLPISGVGRFLMALPYFASLFTPTEWLIIFICFILSSLSGILMIYLSI AVGQLFTDRRALMGFVAYFAIAIIVIILSETISGQLTRDTFDISINLFTYSGIECLIEGI VFYFATNYLLKNKLNIQ >gi|304426473|gb|AEEM01000013.1| GENE 21 19797 - 20495 226 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 205 1 214 311 91 29 2e-17 MTQLLQLHHVTKKYKKHVAIDDVTLSLPAGKIIGLLGPNGSGKTTLIKLMNGLLHPTTGD IVIDGYRPSVETKKIVSYLPDTSYLRENMKIKDALTLFEDFYNDFSREKAEHLLEDLDLN PDEQLKNLSKGNKEKVQLILVMSRQAKLYILDEPIGGVDPAAREYILRTIINNYCEDASV VISTHLIAEIEPILDEIVFLKEGKVILQGNTDDIREEYGKSIDSLFREKYKA >gi|304426473|gb|AEEM01000013.1| GENE 22 20497 - 20865 600 122 aa, chain - ## HITS:1 COG:SPy1285 KEGG:ns NR:ns ## COG: SPy1285 COG1725 # Protein_GI_number: 15675238 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 120 1 120 123 165 75.0 2e-41 MSWKFDEKSPIYVQIAQHIKMQIISQEIKSGDQLPTVRELAEEAGVNPNTMQRAFSELER EGMVYSQRTSGRFVTEDTDLIMQKRREVAEAELQSFVNNMQKMGFQIDDIVSVLESYIKE KN >gi|304426473|gb|AEEM01000013.1| GENE 23 20883 - 20954 79 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVSLTFQTYFCTIYVVQDFFEN >gi|304426473|gb|AEEM01000013.1| GENE 24 21043 - 24150 2869 1035 aa, chain + ## HITS:1 COG:SPy1284 KEGG:ns NR:ns ## COG: SPy1284 COG0587 # Protein_GI_number: 15675237 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 1035 1 1036 1036 1412 66.0 0 MFAQLDTKTVYSFMDSLIDLEGYVKAAKSLGYQTIGIMDKDNLYAAFHFIEEAKKQSLQP VVGLELSFAVEETLSLKLYLLAQDTTGYKNLMKISSKQMSSDIQLDELSDYLTGVAIVVP YFEELETLSLPFDYYIGVDVNSPQKAYEKPIFPLYTVRYFETNEVETLHMLHAIRDNISL KDAPPASQGQNLLACDILTQAFRETFPQALENQEKLVSNIHYEFDTDLKLPRFNRQKPAQ EELIERTEAGLRAKNLWLPAYQERLKKELSVIHKMGFDDYFLIVWDLLRFGRSRGYYMGM GRGSAAGSLVSYALDITGIDPVKNNLLFERFLNEERYSMPDIDIDLPDVYRSEFLHYVRN RYGSLHSAQIVTFSTFGAKQAIRDVFKRFGAPEHELTNITKKISFRDTLTSVYEKNLSFR QIINSKIEYQKAFAIAKRIEGNPRQTSIHAAGVVMSDDNLTEHIPLKAGEDMMITQYDAQ AVEANGLLKMDFLGLRNLTFVQRMQEKVAKDYGVTIDIKSIDLEDKKTLELFAAGKTKGI FQFEQAGAINLLKRIQPRQFEDIVATTSLNRPGASDYTENFIKRRFGQEEVDLIDPLVAP ILEPTYGIMLYQEQVMQIAQIYAGFTLGKADLLRRAMSKKKADDMQKMESDFLEGSQRLG RPLETAKDLFSRMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDVMLNYSSADYI TDALDSQFKVKKIDINTVPYSDKISDGQIYLGLKNLRGVPRDLCYWIIENRPFSSVEDFL TRLPENYQKREMITPLVEVGAFDQFDKNRRKIIENLDPLLIFVNELGSLFADTSYSWIET EDYPNAEKYRLEQSLLGVGISPHPLLEIARQSTKDFTALADLQENTEATILVELNQIRVI RTKTKGEQMAFLSVTDTQKKFDVTLFPETFARFKDELQEGRFYYLTGKIQNRNNRLQMIL NHIQEASSERLWLLLPNHLHDNEISEILSQYPGNIPVILHYQDSKQTLQSQRHLVQRTTE LIEALSSYTLKTIYQ >gi|304426473|gb|AEEM01000013.1| GENE 25 24241 - 25257 1635 338 aa, chain + ## HITS:1 COG:SPy1283 KEGG:ns NR:ns ## COG: SPy1283 COG0205 # Protein_GI_number: 15675236 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Streptococcus pyogenes M1 GAS # 1 337 1 337 337 526 81.0 1e-149 MKRIAVLTSGGDAPGMNAAVRAVVRKAIKEGMEVFGINRGYAGMVEGDIFPLDAQSVSNT LSHGGTFLQSARYPEFATLEGQLAGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAV GIPGTIDNDIAGTDYTIGFDTAVNTAMEALDKIRDTSFSHKRTFVVEVMGRNAGDIALWS GIAAGADQIIIPEEEYDIKDVVAKVKDGYENKGKERHLIVLAEGVMHAEKFAELMKEAGD TSDLRATNLGHILRGGAPSPRDRVLASWMGAHAVELLLEGRGGLAVGIHNEELVESPILG TKEEGALFSLAEDGSIIVNMPHKARLDFAKLNRDIAHL >gi|304426473|gb|AEEM01000013.1| GENE 26 25339 - 26841 1949 500 aa, chain + ## HITS:1 COG:SP0897 KEGG:ns NR:ns ## COG: SP0897 COG0469 # Protein_GI_number: 15900780 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 500 1 501 501 817 87.0 0 MNKRVKIVATLGPAVELRGGKKFGEDGYWGESLDVEASAQKIAELIKEGANVFRFNFSHG DHAEQGERMATVRRAEEIAGQKVGFLLDTKGPEIRTELFEGDAKEYSYKTGEKIRVATKQ GIKSTREVIALNVAGALDIYDDVEVGKQVLVDDGKLGLRVIAKDDATREFEVEVENDGII AKQKGVNIPYTKIPFPALADRDNADIRFGLEQGLNFIAISFVRTAKDVNEVRAICEETGN GHVRLFAKIENQQGIDNIDEIIEAADGIMIARGDMGIEVPFEMVPVYQKMIITKVNAAGK AVITATNMLESMTDKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVEAVRAMATID KNAQTLLNEYGRLDSSSFARTSKTEVVASAVKDATSSMDIKLVVALTESGNTARLISKYR PDADILAVTFDEKTQKSLMINWGVIPVVTEKPASTDDMFEVAEKAALESGLVQSGDNIVI VAGVPVGSGGTNTMRIRTVK >gi|304426473|gb|AEEM01000013.1| GENE 27 27210 - 27767 469 185 aa, chain + ## HITS:1 COG:SPy1281 KEGG:ns NR:ns ## COG: SPy1281 COG0681 # Protein_GI_number: 15675234 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Streptococcus pyogenes M1 GAS # 1 185 1 185 185 186 57.0 2e-47 MVKRDFIRNIIIALIAILAIFLLRIFVFSTFKVHEDAANSYLSNGDVVVVNRNRTPQYKD FIVYEVDGTFYISRVIATAGESATVMDDILYIDNEVQEEPYISQIKSEYLSTSDNQQAFT SDFSVNTITNDKYSEVPKGSYLVLNDDRQNTNDSRTFGLIKESQIRGVVTFKLLPLSKFG FITTE >gi|304426473|gb|AEEM01000013.1| GENE 28 27964 - 29778 2533 604 aa, chain + ## HITS:1 COG:SPy1280 KEGG:ns NR:ns ## COG: SPy1280 COG0449 # Protein_GI_number: 15675233 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Streptococcus pyogenes M1 GAS # 1 604 1 604 604 994 84.0 0 MCGIVGVVGNKNATDILMQGLEKLEYRGYDSAGIYVTNGTDQGRLIKSVGRISDLRAKIG IDVAGYTGIGHTRWATHGQATETNAHPHTSETGRFVLVHNGVIENYLQIKETYLSEHHLK GETDTEIAVHLVGQFVSEGLSVLEAFKKALTIIEGSYAFALVDSEDADTIYVAKNKSPLL IGLGDGYNMVCSDAMAMIRETSEFMEIHDKELVVLTKDSATVTDYEGNEIERESYTAELD LSDIGKGTYPYYMLKEIDEQPTVMRKLINTYSDSEGNMVVDPDIVKTVQEADRIYILAAG TSYNAGFASKAMLEKLTDTPVELGIASEWGYNMPLLSKKPMFILLSQSGETADSRQVLVK ANQMGIPSLTVTNVPGSTLSREATYTMLLHAGPEIAVASTKAYTAQIAALAFLAKAVGEA NGKKEALEFDLVHELSIVAQSIEATLSEKDVIAEKVESLLKTTRNAFYIGRGNDYYVAME ASLKLKEISYIQCEGFAAGELKHGTISLIEDGTPVLGLISSSEAIASHTRGNIQEVSARG ANVLTVVEEELAKPGDDIVVNQVHPYLTSISMVIPTQLIAYFASLQRGLDVDKPRNLAKA VTVE >gi|304426473|gb|AEEM01000013.1| GENE 29 29796 - 29909 100 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTEHMFGSFFICKNTDWFEKSLKLFLNYHTTKKNFA >gi|304426473|gb|AEEM01000013.1| GENE 30 30304 - 32073 2360 589 aa, chain + ## HITS:1 COG:SP0394 KEGG:ns NR:ns ## COG: SP0394 COG2213 # Protein_GI_number: 15900314 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Streptococcus pneumoniae TIGR4 # 1 589 1 589 589 768 71.0 0 MENKSSLKVRVQKLGTALSNMVMPNIGAFIAWGIMATLFIDTGWIPNPTLNVMVSPILTY LLPLLIGYTAGYNVYGQRGAVVGAIATFGAIAGSSVTMFIGAMVMGPLGAWCIKKFDERF QEKIRPGFEMLVNNFSAGIIGFILIILAFLAVGPVVSSLTDAIGVGVQAIINAKLLPIAN ILIEPAKVLFLNNALNHGIFTPLGTEQVAETGKSILFLLETNPGPGLGILLAYSIFGKGS AKSSAPGAIIIHFLGGIHEIYFPYVMMKPMLFFAAIAGGVTGTFTFQLLGAGLSAAASPG SIIAILAMTPRGGYLPVLAGVLMATIASFLVAAIILRTDKSEGDSLESAQAATQAAKAES KGQETSTSGDVKAVTSEEVQQIIFACDAGMGSSAMGASILRDKVKKAGLDIPVSNKAISN LTDTPNTLIVTQEELAERAAQKTPSAVHVSVDNFLATPKYDEIVSALSGESAGVQPVNQE AADAANTESNEIDLNQIDEVIFAYGKARGSVTMGEATLKAIFKNKSIGIPVAKEANDQLG KFNAKNILIVSTIANQTEVQKYAPNAQLLIVDSLVTTPEYDKMVARMYK >gi|304426473|gb|AEEM01000013.1| GENE 31 32099 - 34051 1744 650 aa, chain + ## HITS:1 COG:SP0395 KEGG:ns NR:ns ## COG: SP0395 COG3711 # Protein_GI_number: 15900315 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pneumoniae TIGR4 # 1 650 1 651 651 595 51.0 1e-170 MLLTKREEQLLKAFLEFGKLSIDNISDILKVSKRTVYRTIADLTDSLATLDVDIVKEENK YQLLGNLENLSDFTTQVAYTRNERLNLITYQLLISDEEVTNDDLQEQFAVSNVTIIQDIA DIEKRLKDFDLILERKKGYFLSSPTHNKRRVLAILLTNNISLPNFWKHDYNHFTIVSSEQ LKQATEVFQRYQKELPEFDAKLTQFFIILLALTNWGQVELRSTPVTKVSLEFSQKVFADF SRMSGQFYSLKEILYYAEMVDELAVKRQETPLFNENFDSEFFYNVSNLIDKVARYTKINF AKDQVLFKFLFNHIRLNLAVPLIFEESNSTSIAHQTLHSNEYLHRVVSLLVKEIFPAYLQ SEREYELITLHFASSLRRSPDIYSISLLLLTDERPLATELLVTRIKTIAPFVETIQVKAS SQYDAKDKEYYDSVLSTKVLRDDDIKMIPIYPDAKELLTLQEYLQNVQAHREVRIREQII RTPQYDFQKYLLASQMLLSRFAYQHIDNPKSFVETVPTLIDNIEGITDKNYLSQKLLQRF KTSPMAIPETNLALLHTYSSKVTKSCFVIFDLENPVPAMSMNHQEEEISRVLVMLTRLNE SDEVRDLMTAISQSIIENHLYTEIYKTGNKDIIYQLLNQIFTEKIKKLEN >gi|304426473|gb|AEEM01000013.1| GENE 32 34054 - 34491 549 145 aa, chain + ## HITS:1 COG:SP0396 KEGG:ns NR:ns ## COG: SP0396 COG4668 # Protein_GI_number: 15900316 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol/fructose-specific phosphotransferase system, IIA domain # Organism: Streptococcus pneumoniae TIGR4 # 1 145 1 145 145 221 76.0 4e-58 MDFQKDLIKLNESFDTKEEAIRYCGRLLFQGGYVEEDYIEAMIQRDNDLSVYMGNFIAIP HGTDEAKEKVLKSGITVVQVPDGVNFGTEDNPQIATVLFGIAGIGNEHLEMIQKISIFCA DVDNVVKLADAQSKDEIIRLLNNVE >gi|304426473|gb|AEEM01000013.1| GENE 33 34510 - 35655 1273 381 aa, chain + ## HITS:1 COG:SP0397 KEGG:ns NR:ns ## COG: SP0397 COG0246 # Protein_GI_number: 15900317 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 378 1 378 378 538 70.0 1e-152 MKNAVHFGAGNIGRGFIGDILSKNNVAITFVDVNERVIDELNKRHSYEIEVAEEGQPHIV VKNVSGVNNTKNPDEVIKAIASADIITTAIGPNILPFIAELIAKGIEARKAAGNNTPIDV LACENMIGGSQYLYQEVKKYLSADDLVFAEQYVGFPNAAVDRIVPAQTHEDPLFVVVEPF NEWVVETSRMKNPTFKLTGVHYEKDLEPFIERKLFSVNSGHATSAYTGAFYGAKTILEAL KDDRVKAQVEAVLGEIRSLLITKWNFDEQALIDYHKIIISRFENPFIVDNVNRVARTPIR KLGYDERFIRPIRELKERQLSYQNLLKTIAFVFNYNDSNDEQSVQLQELLATKPLPEVVA DVTGLTDQDLISEIVDSIENL >gi|304426473|gb|AEEM01000013.1| GENE 34 35844 - 36176 360 110 aa, chain + ## HITS:1 COG:SPy1277 KEGG:ns NR:ns ## COG: SPy1277 COG2824 # Protein_GI_number: 15675232 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 110 1 111 111 191 83.0 4e-49 MSLPNCPQCNSEYVYEDGLLLVCPECAYEWNPSDSVEEEGLVVLDSNGTRLADGDSVTIV KNLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKL >gi|304426473|gb|AEEM01000013.1| GENE 35 36362 - 37003 594 213 aa, chain + ## HITS:1 COG:SPy1276 KEGG:ns NR:ns ## COG: SPy1276 COG0765 # Protein_GI_number: 15675231 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 213 1 213 213 297 86.0 1e-80 MSYILQVLPSLLDGAKVTLQVFCIVIVLSIPFGAVLAFLMQIKFKPLQWLLTLYVWIMRG TPLLLQLIFFYYVLPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKV LKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKTAANRDAT LAPMFVAGAIYLLMIGVVTLISKQTEKKFNYYK >gi|304426473|gb|AEEM01000013.1| GENE 36 37015 - 37644 389 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 204 1 210 245 154 38 2e-36 MLELKNISKQFGQKKIFDHFNLTIEDGKILSLVGPSGGGKTTLLRMLAGLEKIDSGEIIY NGEVVPIDHLETLNLLGFVFQDFQLFPHLSVLDNLTLSPVKTMGMTKEAAKEKAVTLLQR LGLGEHANAYPYSLSGGQKQRVALARAMMIDPQIIGYDEPTSALDPELRQEVEKLILQNR EAGMTQIVVTHDLQFAESISDHILKINPK >gi|304426473|gb|AEEM01000013.1| GENE 37 37668 - 38510 1044 280 aa, chain + ## HITS:1 COG:SP1500 KEGG:ns NR:ns ## COG: SP1500 COG0834 # Protein_GI_number: 15901347 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 4 279 2 275 278 336 65.0 2e-92 MKFKKVLVGALALVSTLTLAACSSSSSKKATSTDQWDTYVKNGEITIGFDNTFVPMGYED EDGSNVGFDIDLANAVFKEYGITVKWQSINWDMKETELNNGTIDLIWNGYSITDERAEKV LFTNPYMVNEQVLVTKKSSGITSFADMKDKVLGAQSGSSGYDAFTSNPEVLKDIVSGGDA TQYETFTQALIDLKNDRIDGLLIDKVYANYYLEQEGELDNYNIISSEFDGEDFAVGARKA DKTLVKKINQAFKKLYQDGTFQEISNKWFGEDVATDDVKN >gi|304426473|gb|AEEM01000013.1| GENE 38 38606 - 39823 1184 405 aa, chain - ## HITS:1 COG:SPy1272 KEGG:ns NR:ns ## COG: SPy1272 COG0053 # Protein_GI_number: 15675227 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Streptococcus pyogenes M1 GAS # 4 396 5 397 411 545 69.0 1e-155 MPTPAENLRLAKRGPIVSIIAYLTISAAKLIAGYTLNSSSLIADGFNNLSDILGNVALLI GLHLASKPADAEHRFGHWKIEDLASLITSFIMFIVGFQVLSQTIQKIFSGSRTAIDPEGA IVGVISAIIMYGVYVHNKRLSQKVKSSALVAAAKDNLSDAVTSIGTSVAIVAASFNLVII DRLAAIVITYFILKTAYDIFMESAFSLSDGFDEKELKKYKEAILKIPKVTAVKSQRGRSY GSNIYLDIVVEMNPDLSVYESHEITEQIETLLSQEFSVYDTDVHVEPAAIPEDEIWENVY KKLYKDEKIILSKIPDYEDLLADNFTLIDDDGTTYSKEEMISRKKHCMSNFDDFQMTSIS QKTKLITYTLGHKSHTSIWRRKEEWHLIFHQITPISDNSNIEAKD >gi|304426473|gb|AEEM01000013.1| GENE 39 39768 - 39968 109 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTIGPRLANRRFSAGVGISNNSFENDSYIIKSIIVKINITLYYTISLSLSQRKYDKINY LATIAN >gi|304426473|gb|AEEM01000013.1| GENE 40 39997 - 41325 1334 442 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 5 439 7 441 456 518 57 1e-146 MYDFLSSLDSLVWGPPLLVLLVGTGIYLSTRLGLLQVFRLPKALKLIFSAEAKGQGDISS FAALATALAATVGTGNIVGVATAIKLGGPGALFWMWMAAFFGMATKYAEGVLAIKYRTRD ANGDIAGGPMHYIVNGMGKHWKPLAIAFSIFGVMVALFGSGTFTQVNSITDSLNNTVGWS PKVISLVLAVLVSIIIFGGIQSISKVAEKIVPFMAIIYIVATLTILAFHFDHIIPGLGLV LHSAFTGKAATGGFAGATVVTAIQAGIARGIFSNESGLGSAPIAAAAAKTEEPVEQGLVS MTGTFIDTIIICTLTGLSIIVTGGWSSNLNGATLTQSAFSSVFGNLGVYALTISLILFAF TTILGWCYYGERCFEFLFGVKAIPVYRIVFIAMVALGGYISLETIWVIADIVNGLMAIPN LIALLALSPIIIKETKHYFDNH >gi|304426473|gb|AEEM01000013.1| GENE 41 41776 - 43239 1830 487 aa, chain + ## HITS:1 COG:lin0288 KEGG:ns NR:ns ## COG: lin0288 COG2723 # Protein_GI_number: 16799365 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 3 484 6 485 486 630 63.0 1e-180 MTKQFPEGFLWGGATAANQFEGAWNVDGRGPATSDTARAVAPEERKSMGSEFNSPMTRAK LDAALNDKEGLYPKRWGSDFYHRYKEDIALYAEMGFKTFRLSIAWSRIFPNGDDATPNEA GLAFYDKVFDELNKYGIEPLVTLSHYEFPIHLVTEYGGWKNRKVIDFFVRYAETVFNRYK DKVKYWLTFNEINIIGMTGYLSGGLLFEDGKLNLQDMYQAAHHQFVASSLATKIGHEINP DFKIGCMLARMQAYPATCNPEDVMEEIKKDHENLFFSDVQVRGKYPAYAKRFFKENNIEL EIADGDLEILEKYPVDFMSFSYYMSSIARKQKTGDQTAGNLILSEPNPYLEASDWGWQID PVGLRITLNNLYDRYQVPLMVVENGLGALDTVEEDGSIHDQYRIDYLQSHVKQMYEAIED GVDLMGYTWWGCTDLVSASTSEMSKRYGFVYVDADDQGNGSFDRSRKDSFFFYKDLIATR GANILND >gi|304426473|gb|AEEM01000013.1| GENE 42 43303 - 43917 430 204 aa, chain + ## HITS:1 COG:lin1208 KEGG:ns NR:ns ## COG: lin1208 COG0406 # Protein_GI_number: 16800277 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 1 190 1 185 199 146 42.0 2e-35 MATKLYLMRHGETLFNTQGRVQGACDSPLTDLGIQQALLAKDYFNENSIWFDSVYSSTQE RATDTAKLVSGQSQVTQLKGIKEMNFGEFEAQPEFLLPKFRAGANSFEDLLVPFGGEDIV TVGKRGLDSILEVLANDNHADNILMVSHGATMWGVCLQLGIQFPEGVGFSNCAICEFQYH QEQLELQKLILPTKAFKTYSFERE >gi|304426473|gb|AEEM01000013.1| GENE 43 43920 - 44543 552 207 aa, chain + ## HITS:1 COG:lin1208 KEGG:ns NR:ns ## COG: lin1208 COG0406 # Protein_GI_number: 16800277 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 1 182 1 175 199 166 50.0 2e-41 MIKTFYVMRHGQTRFNLQGRIQGACDSPLTELGIEQAKSARQHFREEGITFTRVYSSTQE RACDTAELATGRTDYIRLKGLKEMDFGSYEAHQEYLNPPLHREDGSGYRDYFVAYGGESN VQVYERMAKTIREVLEQSSDEDQLLFVSHGAAITQFYRHATLNPPVPKKRLANCAIFKMT YDGKDIMVQSIYNPTEKEYIFEREEND >gi|304426473|gb|AEEM01000013.1| GENE 44 44536 - 45138 489 200 aa, chain + ## HITS:1 COG:lin1208 KEGG:ns NR:ns ## COG: lin1208 COG0406 # Protein_GI_number: 16800277 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 1 191 1 186 199 154 44.0 1e-37 MTKTLYLMRHGETLFNQLGLIQGWCDSPLTTNGRQQAQAARDYFHAHHIAFDELYCSTAE RCSDTLEIVSGRADYTRLKGLKEFNFGRMEGKPEYLHPNREPNQKGHGDFYLKYDGESET QVKKRVSDTVFRLVSQADDDATILAVSHAGAIMSFFSALELDNHPKLHFSNCCIFNYSIT DSTYDLIKIIDPVSGQIYDK >gi|304426473|gb|AEEM01000013.1| GENE 45 45247 - 46365 1268 372 aa, chain + ## HITS:1 COG:SPy1117 KEGG:ns NR:ns ## COG: SPy1117 COG0628 # Protein_GI_number: 15675097 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 1 366 8 374 382 406 63.0 1e-113 MKFEKKQVYYVVLAFVLCYAIQAYWSNGASIVGTIYKASFPFLIGAGIAYIVNIVMSLYE MLYTRVIKNRVLLKAKRAISMILAYLTFILLISWLFSIVLPDLISSINSLLKIDTTGIAN FIKEVSDNKAIKELLDYFGNSSDITSTLSDYSQQILNQVLSVLTGVLTSVSTIASTVLNV FVSLVFSIYVLASKEQLGRQFNLLIDTYLGKYAEKVHYVLDILHQRFHGFFVGQTLEAMI LGSLTAAGMFLFSFPYAATIGILVAFTALIPVIGAYIGATIGFILIATQSVSQAFLFLVY LIVLQQFEGNVIYPRVVGGSIGLPGMWVLMAITIGGALWGILGMLVAVPLAASLYQIIKD NVAKRQQANLDN >gi|304426473|gb|AEEM01000013.1| GENE 46 46372 - 47211 633 279 aa, chain + ## HITS:1 COG:ECs4502 KEGG:ns NR:ns ## COG: ECs4502 COG1442 # Protein_GI_number: 15833756 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Escherichia coli O157:H7 # 2 263 26 285 337 99 28.0 1e-20 MDTINLLFSIDDGYVSQFMVTLYSIYQNSSNHNLAVYVLQKQLLKKNDDISEFCQKLGVR YTPVVIGEEAFEDAPTTDRYPETIYYRLLAHEYLPKELDKILYVDADILCLNDVVPLYKL NLGDKLYAAASHTSDGNISELVNKLRLRNFEAEGYFNSGVLLMNLDAIRQSVHRQDILDY IEQNNHLLLLPDQDILNALYGHQTLQIPDQIYNYDARYNVLYYSRSSGKWNLNWVIEHTV FLHFCGRDKPWKKDYRGRYSALYKHYQHRALRLKNKKNH >gi|304426473|gb|AEEM01000013.1| GENE 47 47258 - 47938 645 226 aa, chain + ## HITS:1 COG:SPy1118 KEGG:ns NR:ns ## COG: SPy1118 COG2003 # Protein_GI_number: 15675098 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Streptococcus pyogenes M1 GAS # 1 226 1 226 226 277 62.0 9e-75 MYAIEMKADAMLPRERLRDLGAEHLSNQELLSILLRTGTKTTPVLEVANQILKNLDSLAD FQHLSLQELQKINGIGYVKSIEIKAMIELAKRISKAEYVQKERIMSSERLARKMMLELSD QKQEHLVAIYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGS PEPSENDLQFTQKMKRSCEDIGIICLDHIVIGKYQYYSFREETDVL >gi|304426473|gb|AEEM01000013.1| GENE 48 48088 - 48735 700 215 aa, chain - ## HITS:1 COG:SPy1120 KEGG:ns NR:ns ## COG: SPy1120 COG2344 # Protein_GI_number: 15675100 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 212 1 212 214 350 81.0 1e-96 MTTEKSIPKATAKRLSLYYRIFKRFNTDNVEKASSKQIADAMGIDSATVRRDFSYFGELG RRGFGYDVKKLMNFFADILNDHSTTNVLLVGCGNIGRALLHYRFHDRNKMQIAMAFDTDD NEMVGHETSDGIPIYGISSLKKHAQEAGIETAILTVPSSKAQEVADVLVDAGIHGILSFS PVHLNVPKGIIVQYVDLTSELQTLLYFMNQSNQNN >gi|304426473|gb|AEEM01000013.1| GENE 49 48881 - 49228 492 115 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1011 NR:ns ## KEGG: GALLO_1011 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 115 1 115 115 203 100.0 2e-51 MAFEKEITLENCLYSYAISDNIKKYTLRDTTFSQNRIGNYELTRLLEKVPNSGDGFPLKI TINKDLTGFKLSITDKSGLRFVNIFKSEDNKILQEKFYFLMDSLVERDIFTKKRV >gi|304426473|gb|AEEM01000013.1| GENE 50 49230 - 50345 1372 371 aa, chain - ## HITS:1 COG:SPy1122 KEGG:ns NR:ns ## COG: SPy1122 COG1104 # Protein_GI_number: 15675102 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 370 1 370 375 481 67.0 1e-136 MIYLDNAATTPLTSSVIDAMTEIMVNDFGNPSSIHGIGRQANQRLRSSRQMIASALKTDP RRIIFTSGATESNNTAIKGYALANQAKGKHLITTAIEHHSVLHTMEYLEKRFGFEVTYLK PENGHISAQQVADALRDDTILVSIMFANNETGDLLPVKEIGELLQDHQAAFHVDAVQAVG KIDVFPEEIKADFLSASAHKFHGPKGVGILYSTPQHFDNLLHGGEQEEKRRASTENMIGI AGLAQALSDAIAHKDENYQHVQELRQAFLDGISDLDYYINGSQHKMPHVLNIGFPNQNNG ILLTQLDLAGFAVSTGSACTAGTVDPSHVLSSIYGDDSPRLTESIRISFSELNTISEVQQ LAQKLIEIVGK >gi|304426473|gb|AEEM01000013.1| GENE 51 50353 - 51324 1153 323 aa, chain - ## HITS:1 COG:SPy1123 KEGG:ns NR:ns ## COG: SPy1123 COG0462 # Protein_GI_number: 15675103 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 318 1 318 326 521 81.0 1e-148 MAEHYADKQFKLFSLSSNVEIAQKIADTVGVPLGKVSTRKFSDGEIMINIEETVRGDDIY IIQSTSYPVNDNLWELLIMVDACKRASASTVNVVIPYFGYSRQDRIAASREPITAKLVAN MLVKAGVDRLLTLDLHAVQVQGFFDVPVDNLFTVPLFAKYYCELGLKGEDVVVVSPKNSG IKRARSLAQYLDSPIAIIDYAEDDSHREEGYIIGEVAGKKAILIDDILNTGKTFAEAAKI VERDGATEIYAVASHGLFAGGAAESLDTAPIKEILVTDSVATKERLPKNIKYLSASKLIA DAIIRIHEKSPLSPLFSYNATKD >gi|304426473|gb|AEEM01000013.1| GENE 52 51410 - 51979 537 189 aa, chain - ## HITS:1 COG:SPy1124 KEGG:ns NR:ns ## COG: SPy1124 COG4116 # Protein_GI_number: 15675104 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 188 1 188 192 210 62.0 1e-54 MTHLEIEYKTLLTKDEFNRLNNQFSHVAPVTQTNYYFDSENFDMKANRMSLRIRTLPNRA EITLKIPKEVGNLEYNYNLSVADAKEIIKSGKFPDVDFLKLIEENGVKLSSLKNFGSLTT TRRETMTKIGLMALDSNQYAGIKDYELELEVENAEQGKKDFDNFLAEHAIDFKYAKSKVA RFSATLKRI >gi|304426473|gb|AEEM01000013.1| GENE 53 52112 - 52777 856 221 aa, chain + ## HITS:1 COG:SPy1125 KEGG:ns NR:ns ## COG: SPy1125 COG2357 # Protein_GI_number: 15675105 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 221 3 223 223 359 86.0 3e-99 MDWEKFLDPYIQTVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVESIKEKMELRGIK PENIAQDLQDIAGVRVMVQFVDDVDEVLALLRGRHDMTIVQERDYINNMKASGYRSYHVI VEYPVDTIDGQKTVLAEIQIRTLAMNFWATIEHSLNYKYKGEFPDEIKKRLETTAKIALE LDEEMRKIREDIREAQLLFDPASRKLSDGVGNSDDTDEYYR >gi|304426473|gb|AEEM01000013.1| GENE 54 52752 - 53588 940 278 aa, chain + ## HITS:1 COG:SPy1126 KEGG:ns NR:ns ## COG: SPy1126 COG0061 # Protein_GI_number: 15675106 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Streptococcus pyogenes M1 GAS # 1 278 1 278 278 442 79.0 1e-124 MTQTNITDKVTRVAIVANGKYQSRRVASKLFATFKEDKRFYLSKKDPDIVISIGGDGMLL SAFHMYEKNLDKVRFVGIHTGHLGFYTDYRDFEVEKLIENLHADKGRKVSYPILRAKITL DDGRVVKARALNEVAIKRIEKTMVADVVIDKVKLERFRGDGLSVSTPTGSTGYNKSLGGA ILHPTMEALQLAEISSLNNRVYRTLGSSVIVPKKDKIEIIPKRQGVYTISIDNKTMHYKN VSKIEYCIDNKKISFVATPFHTSFWERVTDAFIGELES >gi|304426473|gb|AEEM01000013.1| GENE 55 53585 - 54475 324 296 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 36 286 40 284 287 129 33 8e-29 MRFDFVADRQTKVKTFLKGHDVSKGLLAKVKFKGGNIWVNGVEQNAIYLLNVGDVVTIEI PDEEEHETLVPVKHDLNIAYEDEHFLIINKPHGYASIPSVLHSNTIANFVKHYYLEQNYP NKQVHIVTRLDKDTSGLMLFAKHGYAHARLDKQLQNKTIEKRYYALVSGKGELADKGEII APIARSDDSIITRCVHPSGKYAHTSYEVVARFGEVALVDIRLHTGRTHQIRVHFSHIGFP LLGDDMYGGSMDYGITRQALHCHYLRFVNPYTNEEIIQTTNLTDDFDSVIMELQQN >gi|304426473|gb|AEEM01000013.1| GENE 56 54492 - 55490 1359 332 aa, chain + ## HITS:1 COG:SPy1128 KEGG:ns NR:ns ## COG: SPy1128 COG0280 # Protein_GI_number: 15675108 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Streptococcus pyogenes M1 GAS # 1 328 1 328 331 533 84.0 1e-151 MGIRSLFGSLREKIIGKNLKIVFPEGNDERVLRAAARLKFEGLIEPIILGDAKEVRALLA KFGFADQNYVIINPAEYDQFDEMKEAFLEIRKGKVTPEDAERLLQDVNYFGVMLVKLGLA DGMVSGAIHSTADTVRPALQIIKTKPGISRTSGVFLMNRETTEQRLVFADCAINIDPTAQ ELAEIAVNTADTAKIFDIEPKIAMLSFSTKGSAKAPQVEKVQTATKIAKETRPDILLDGE LQFDAAFVPGTAAVKAPDSDIAGQANVFIFPDLQSGNIGYKIAQRLGMFEAIGPILQGLN KPVNDLSRGSSAEDIYKLAIITAAQAIDGNDN >gi|304426473|gb|AEEM01000013.1| GENE 57 55558 - 56313 894 251 aa, chain + ## HITS:1 COG:PM0579 KEGG:ns NR:ns ## COG: PM0579 COG4221 # Protein_GI_number: 15602444 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Pasteurella multocida # 1 250 1 249 252 318 62.0 6e-87 MSKIALVTGASAGFGKAIAEKLVSDGYRVIASARRLEKLQSLQAALGEQNVYPLQMDVSQ TQAIDEALASLPKEWREIDILVNNAGLALGLDKAYEADFSDWLTMINTNIVGLTYLTRQI LPDMVKRNTGMIINLGSTAGTVPYPGANVYGASKAFVKQFSLNLRADLAGTKIRVTNIEP GLCEGTEFSNVRFKGDNERAEKLYDGAHAIKPEDIANTVSWVASQPSHVNINRIEIMPVS QSFGPQPVYRD >gi|304426473|gb|AEEM01000013.1| GENE 58 56344 - 56742 380 132 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1020 NR:ns ## KEGG: GALLO_1020 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 5 132 1 128 128 239 98.0 2e-62 MIDNMKNIKALLAHLPYRASFYDNNLKLIYSNNRSDGSFFPENESEKLPEWIWQSLHQSP EKVLHLQIPTDSFDAILTQTYQLILDTSGQSLGVITYIQDLKPLLSSYLKETGQAIVAWS DTTSGPSIGNDL >gi|304426473|gb|AEEM01000013.1| GENE 59 56915 - 57754 1059 279 aa, chain + ## HITS:1 COG:Cgl2568 KEGG:ns NR:ns ## COG: Cgl2568 COG0561 # Protein_GI_number: 19553818 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 1 279 1 269 271 251 48.0 1e-66 MSKIIFLDVDGTLVDYHNRVPESAVKAIQQARQNGHYVFVCTGRSRAEMQPELWEIGLDG MIGGNGSYVEHNGQVIMHQLISKEDAKAIVDWLHERGLEFYLESNNGLFASENFKEVARP VMRQYALSKGKTAAEVEHMEAEDALHGLIYGGELYRDDLNKVSFILNSYQDHLDSAKAFP SLKAGTWGGRGETALFGDLGVKDITKAHAIDVLLEHLQADKKDTIAFGDAKVDIPMLEYC EIGVSMGNGGPEILAMADMVTDDVEEDGLYNAFEKLGLI >gi|304426473|gb|AEEM01000013.1| GENE 60 57921 - 59339 1668 472 aa, chain + ## HITS:1 COG:CAP0010 KEGG:ns NR:ns ## COG: CAP0010 COG2723 # Protein_GI_number: 15004715 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 1 470 1 469 469 619 61.0 1e-177 MLHKNLKPFPEHFLWGASTSAYQVEGAALEDGKGLSCQDVKEIPAGTADLSVSVDHYHHY KEDIALMAEMGFKSYRFSISWTRVLPNGTGEVNPKGIEFYNNLIDECLKYDIEPIVTMFH FDMPAALDERGSWSTHDSVDWFAEYARVLFENFGDRVKYWLTINEQNMLTLVGPVIGTLH VPEGTTNLTKEIYQQNHHQLVAQAKAMQLCHEMLPDAKIGPAPNISLVYPASSKPEDVIA AQNFNALRNWLYLDAYVFGEYNNLAWAYLEENDALPTVTDEDRAIMKAAKPDFIGFNYYN TATVEASDGSEVAGANGDQQSNQTFPGFAKSVDNPNLVKTEFGWEIDPVGFRATVREMYS RYRLPLLVTENGLGAYDTLTEDGKIHDNYRIEYLRQHIAQIQLAISDGVDMLGYNPWSAI DLISTHEGIRKRYGFIYVDRTDEEVGSLKRYRKDSFFWYKKVIAANGQDLSD >gi|304426473|gb|AEEM01000013.1| GENE 61 59398 - 60054 266 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 20 203 16 204 245 107 33 4e-22 MTLRTHNIGYWYTNNPDDYLFKDVNLTFEKGKVYSILGQSGSGKTTFLSLLAGLDSPKAG EIYLEDNDINKSGLTSYRKNSVSTIFQAYNLMTYMTARQNVQTALEISNKPVDNAKIEEL FELVGIPKEMIDKPVLQLSGGQQQRVAIVRALATEHDLIIADEPTGNLDEETTQDIVNIF KDIAHKQNKTVIIVTHETAVAQETDVTFELKKKQFTEV >gi|304426473|gb|AEEM01000013.1| GENE 62 60068 - 61618 1831 516 aa, chain - ## HITS:1 COG:L92987 KEGG:ns NR:ns ## COG: L92987 COG0577 # Protein_GI_number: 15672852 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 1 515 1 506 506 281 42.0 2e-75 MNFIKRAWLATKAKKGRTALLILVTSAILIFVLAGLTIKNAADSAVESAKSEAGATVTLS VNREAMMKAFNPDSDSSSDDSSDDSSATTSVDLATAESIAEKDGVASYLFTTTTTATAGD DISAISTSSSSSSDDSDSSSDDSSDSNQPSGRGGMEMTSGDFTITGVNSTDYVSDFTSGT SEITDGVGITSDTADNSAVISSDLADANDLSVGDTFTVTTTVDDTETSYTLTVVGIYENS STATTAQMMSNASNPQNNIYTNLTTADTMKGETDTLDSAVYTLSNPEDMDDFIDEVESEI DTDSYSVTSSDEIYEQMLSPLNNISSIAQNIVILVAIAGAVILTLIVILSIRERRYEIGV LMSLGENRIKIIGQFFMELFMVTVVSLIIASFAGNFVGNALGNQLLSSSTSTEQTTQTSG QNGGGPGQDTNSSDSNNSDSGQKSGAPGGGGGRGGMGNMVSMATSSTQEIDDLDIKLTGT DVAKLGGIALLISFVSTILASIGIIRMKPKDILSSN >gi|304426473|gb|AEEM01000013.1| GENE 63 62005 - 62988 1281 327 aa, chain + ## HITS:1 COG:SPy1135 KEGG:ns NR:ns ## COG: SPy1135 COG0516 # Protein_GI_number: 15675112 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Streptococcus pyogenes M1 GAS # 1 327 1 327 327 598 88.0 1e-171 MYNEMPVFDYEDIQLIPNKCIISSRSEADTQVTLGDYTFKLPVIPANMQTIIDENIAEDL AKNGYFYIMHRFDEEARKPFVERMHEQGLIASISVGVKDYEYDFVTSLKDDAPEFITIDI AHGHSDSVINMIQHIKKELPKTFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKV KTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHLES PGKLVEVDGEQYKEYYGSASEYQKGEHKNVEGKKILLPVKGHLKDTLVEMQEDLQSAISY AGGRDLHSLTRVDYVIVKNSIWNGDSI >gi|304426473|gb|AEEM01000013.1| GENE 64 63039 - 63677 717 212 aa, chain - ## HITS:1 COG:BS_yvaB KEGG:ns NR:ns ## COG: BS_yvaB COG1182 # Protein_GI_number: 16080407 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Bacillus subtilis # 2 186 3 185 211 87 31.0 1e-17 MKTLLINAHPDYQNNNSFSATLQEKFLDKYAARFSNDDLTILNLYATDIPRIEQDELLGI WKKPADNLPLTEAELALAKQSQALLEQFKEHHRIVIVSPLHNFNVTSRMKDYIDNILIAR ETFKYTENGSVGLMTDDYQVLLLLASGSIYTNQDRYTTLDFAPNYIRGIFQEIMGFDAFH LVRAQGTAVRSKEEILAETDATLNKAFSEFYH >gi|304426473|gb|AEEM01000013.1| GENE 65 63760 - 64698 945 312 aa, chain + ## HITS:1 COG:lin0383 KEGG:ns NR:ns ## COG: lin0383 COG2378 # Protein_GI_number: 16799460 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Listeria innocua # 1 310 1 310 315 154 28.0 2e-37 MKKSERLNHELIFLSERPFFQLKDLMAEFQISKRTALRDMAALEDMGLAFYTETGKNGGY HLVSQTLLTPIYFTQDDLTMIFYALNSLRRLSVTPFDKSYPQIFEKLLVSLSTAQREYVL KILNVLEFYDVPVISSSTFLRELLEATVDEQILYIDYKQTERLQELIQVYKVFYRSGIWF FEAYLVDEDKWKTYRVDCLLACERAENQENRQNRAQLAKSFMAFYQDYLTISFKCEIDGA GKEHFLKGAYRDMQLHEENGQYYIVGHFSREELDYMVQYLITFGKHLTVMEPDFLREAYL AELQEIVDRYAQ >gi|304426473|gb|AEEM01000013.1| GENE 66 64715 - 65257 376 180 aa, chain + ## HITS:1 COG:L85237 KEGG:ns NR:ns ## COG: L85237 COG3548 # Protein_GI_number: 15672844 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Lactococcus lactis # 1 167 1 170 188 92 35.0 3e-19 MNKGRLEAFTDAIVAIIITILVLELPKPDSYTISALFEHWQAYIAYISSFTLLLGVWYNH HNLFKSIEVIDRRVFWVNGVWLLIQSFIPFVTSWIGDYPDHAQPLVTFIVLSILWTMSYR LLYHFLSEINDQMPPYPYRVTLNIITVYIVLIVIALIQPLLGLLALASYNIYGVFRPAAF >gi|304426473|gb|AEEM01000013.1| GENE 67 65630 - 66211 880 193 aa, chain + ## HITS:1 COG:SPy1136 KEGG:ns NR:ns ## COG: SPy1136 COG0503 # Protein_GI_number: 15675113 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 1 193 1 193 193 276 78.0 1e-74 MKLLENRILNDGNVLGEDILKVDSFLTHQVDYELMQEIGKVFADAYKDAGITKVVTIEAS GIAPALYTAQAMNVPMIFAKKAKNITMTEGILTAEVYSFTKRVTSTVSIASKFLSEDDTV LIVDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQTGRQLLEETGVPVTSLARIKE FKDGQVVFMEADA >gi|304426473|gb|AEEM01000013.1| GENE 68 66177 - 67493 442 438 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 26 436 19 426 447 174 29 2e-42 MDKLSLWRQMRKMEMNEQKHSQAAILGLQHLLAMYAGSILVPIMIAGALNYSAEQLTYLI STDIFMCGVATFLQLQLRKHFGVGLPVVLGCAFQSVAPLSIIGAKQGSGYMFGALIVSGI YVILISGIFSKIADFFPPVVTGSVITTIGLTLIPVAIGNMGDNADSPTAQSMILALITIA IVLAVNIFAKGFIKSIAILIGLIGGTIVAAFMGLVDTSVVTEAPLVHIPQPFYFGAPKFE ITSIVMMCIIATVSMVESTGVYLALSDLTGEKLDSKRLRNGYRAEGAAVLLGGIFNTFPY TGFSQNVGLVRISGIKTRRPIYYTALFLVILGLLPKFGAMAQMIPSPVLGGAMIVLFGMV ALQGMQMLNQVDFQHNEHNFIIAAVSIACGVGFDGTNLFDSLPSTLQMFLTNGIVIATLF AVVLNLILNGKTKTEETK >gi|304426473|gb|AEEM01000013.1| GENE 69 67542 - 68453 691 303 aa, chain - ## HITS:1 COG:SPy1138 KEGG:ns NR:ns ## COG: SPy1138 COG1477 # Protein_GI_number: 15675115 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Streptococcus pyogenes M1 GAS # 1 302 10 311 312 333 53.0 3e-91 MGTIIDIVVDSDTPHQHIKEVCHLLTVYKNRFSANDNDSELMIINHNAGIAPVTVHPDLF ELIELGKTHSLLQPSNLDIAIGPLVQSWRIGFEDAKVPDKENIQKAIALANPEHIILNAA EKSVFLNRKGMKIDLGALAKGYIADKIMDYLKTKNVSSAMINLGGNVLVYGDNSKRENGI WHIGIQHPQKQRGNNLGILTLKDKSVVTSGIYERHLQVGDKDYHHIFDRHTGYPIETDMA SLTIVSDLSVNCEIWTTRLFGLPIKQAFETIQSTPNIEGIIITKDNRFAVTSGLKQDFQL LYS >gi|304426473|gb|AEEM01000013.1| GENE 70 68615 - 68800 381 61 aa, chain - ## HITS:1 COG:SPy1139 KEGG:ns NR:ns ## COG: SPy1139 COG1942 # Protein_GI_number: 15675116 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Streptococcus pyogenes M1 GAS # 1 61 1 61 61 96 83.0 1e-20 MPFVKIDLFEGRTEEQKIELAREVTEVVSRVAKAPKEAIHVFINDMPEGTYYPHGEMKKK N >gi|304426473|gb|AEEM01000013.1| GENE 71 68988 - 69113 180 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVGFRKPSFKKSLKARTTAKWKRQTKKAVIPGYGKKEQVG >gi|304426473|gb|AEEM01000013.1| GENE 72 69582 - 70163 621 193 aa, chain + ## HITS:1 COG:SPy1140 KEGG:ns NR:ns ## COG: SPy1140 COG1435 # Protein_GI_number: 15675117 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 189 1 189 189 347 88.0 9e-96 MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDGYGVVSSRIGMRRKAI AITEEMDIFAFIQELPEKPYCVLIDECQFLTKKHVYDLARVVDDLDVPVMAFGLKNDFQN ELFEGSKYLLLLADKIDEIKTICQFCSKKATMVLRTENGKPVYEGNQIQIGGNETYIPVC RKHYFNPMISKEK >gi|304426473|gb|AEEM01000013.1| GENE 73 70202 - 71281 1518 359 aa, chain + ## HITS:1 COG:SPy1141 KEGG:ns NR:ns ## COG: SPy1141 COG0216 # Protein_GI_number: 15675118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Streptococcus pyogenes M1 GAS # 1 358 1 358 359 592 92.0 1e-169 MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNI EDAEEMIKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGA AGGDEAALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYE SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQDAERKSTIG TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQTKKLEELNQ >gi|304426473|gb|AEEM01000013.1| GENE 74 71281 - 72111 253 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187924448|ref|YP_001896090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Burkholderia phytofirmans PsJN] # 36 238 51 257 294 102 35 1e-20 MNYAETISQLEKQLQAIGEDPENLTYVFRELKGWTLLDFILHQNQAITEKDQMLLEQIMA QLTEHRSPQYITGKAYFRDLELSVDERVLIPRPETEELVDLVLKENSRADLRVLDIGTGS GAIAISLKAARPNWQVTASDISADALQLAKENALKNQVELTLIQSDVFSQITERFDMIIS NPPYIAYDDEDEVGINVLASEPHLALFADEDGFAIYRQIIENASEHLTENGKLYFEIGYK QGEGLRALLSKHFPAKRVRVIKDMFGKDRMVVMDND >gi|304426473|gb|AEEM01000013.1| GENE 75 72104 - 72703 590 199 aa, chain + ## HITS:1 COG:SPy1143 KEGG:ns NR:ns ## COG: SPy1143 COG0009 # Protein_GI_number: 15675120 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Streptococcus pyogenes M1 GAS # 1 196 1 196 196 268 68.0 7e-72 MTDLETILQNGGAVILPTETVYGLFAQAMNENAVEHVYQLKRRPKDKAMNLNVADFETIL AFSKQQPSYLKKLYDAFLPGPLTIILQANDRVPAWINSGLSTIGFRIPNHSQTLKLIKKA GPLIGPSANISGQESGKVFKEIQKQFGGTVTGFADDAALTGVDSTILDLSGKTARILRQG AITQNDLLAVVPDLTFTKE >gi|304426473|gb|AEEM01000013.1| GENE 76 72807 - 74057 1541 416 aa, chain + ## HITS:1 COG:SP1024 KEGG:ns NR:ns ## COG: SP1024 COG0112 # Protein_GI_number: 15900895 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 416 1 416 418 658 79.0 0 MIFDKENYEAFDKELWEAVHAEEVRQQNNIELIASENVVSKAVMAAQGTLLTNKYAEGYP GKRYYGGTDCVDIVENLAIDRAKELFGAKFANVQPHSGSQANAAAYMALIQPGDTVLGMD LAAGGHLTHGAPVSFSGKTYHFISYTVDPVTERIDYDKLAELAEEVKPKLIVAGASAYSR IIDFQRFRAIADSVGAYLMVDMAHIAGLVASGHHPSPVPYAHITTTTTHKTLRGPRGGLI LTNDEALAKKINSAVFPGLQGGPLMHVIAGKAVAFKEALDPAFKEYGENVIKNAAAMADV FKQHPNFRVISGGTDNHVFLVDVTKVVENGKVAQNVLESVNITLNKNSIPFESLSPFKTS GIRIGSPAITSRGMGEKESRAIAELIVKALENYQNETILEEVCREVKALTDAFPLY >gi|304426473|gb|AEEM01000013.1| GENE 77 74102 - 75079 907 325 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1039 NR:ns ## KEGG: GALLO_1039 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 325 1 325 325 561 100.0 1e-158 MIDLYIKRIVIHQFTPNDTELILSDQLLTITPRIDEYFRKKLSKVFSDEAKRGMFAEDNV FLSYLSDDLMESSVKIAQLWKEEFVISENQKTNDLVFIQFDKDGVEHFAFLRIALKENFT HISSDSESPIKVTQNNLPSAAQTPDEALVINRSNHHYYLIEKRIKHNGSFANYFSENLLQ VQPEQSVKKSIKMVEQTAQKIAENFQQDDFAFQSKMKAAIHKNLEEEQELSPEKLADQLF DSNLTARLTFVDELKESIPEPIQVADIDHSRQTKKLENQKLSLSNGIQLIVPNNVYDDAE SVEFIQNPNGTYSILIKNIEDIQNK >gi|304426473|gb|AEEM01000013.1| GENE 78 75079 - 75681 537 200 aa, chain + ## HITS:1 COG:SPy1147 KEGG:ns NR:ns ## COG: SPy1147 COG0741 # Protein_GI_number: 15675124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Streptococcus pyogenes M1 GAS # 1 200 1 199 199 283 73.0 2e-76 MFKFLRRLIILGFVIFCGYQTYVVHKNVQNVLQYKDMIKEILDDNDTTTNVDLVLAMIYT ETKGDDGDVMQSSESSDGVANSITDSQTSIRQGVTVLSENLTLADEAGVDVWTAVQAYNF GTAYIDYVAKNGGENTIALATAYSRDVVAPSLGNTTGETYFYYHPLALISGGKLYKNGGN IYYSREVHFNLYLIELMSLF >gi|304426473|gb|AEEM01000013.1| GENE 79 75721 - 77445 184 574 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 329 556 11 233 318 75 27 1e-12 MKELGHYFKGYLKETILGPLFKLFEASFELLVPIIIARIVDAIIPHHDKNHLYMMIGLLF LLAIVGVLVAITAQYFSSKAAVGYTRQLTKDLFKKIMGLSKEDRDQLTTSSLVTRLTSDT YQIQTGINQFLRLFLRAPIIVFGAIIMAFTISPKMTIDFLLMVVILFAIVFTMSHLLNPI YAKIRQATDRIVNMTRQQLEGVRVIRAFGQVVAEEQEFAAANQDYTDLQIKAGHLSSLVT PLTYLVVNGTLILVIWQGNLEIGRGLLSQGMLIALVNYLLQILTELLKMTMLVTSLNQSF ISAKRITEVFEKDSEDLATELVQSESAFALAVKDMTFTYPTAAESSLSHIDFSVNAGDFL GVIGGTGSGKSTLVELLTHLYTPQEGSLAIFQNQHSPKTLGEWRSWVNVVPQKAELFQGT IRSNLTLGIRDEVSDNELWRALDIAQASDFVSEKEGQLDAKVEAFGRNFSGGQRQRLTIA RALVRKAPFLILDDSTSALDYLTEAKLLSAIHEELKEVTLVLISQRTNSLKAADKILLLD KGHQLGFASHDELLKQNDVYRAIHYSQHQEEKEA >gi|304426473|gb|AEEM01000013.1| GENE 80 77447 - 79183 175 578 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 341 565 12 233 312 72 28 1e-11 MKAKNQNHTSRRLFKDLLSQKGLVLGATLGTIAQVALTVYLPILIGNAVDVVLSPKSISL IVPIVAKMSVVVALNTLVQWVNPLIYNRLTFGYIYTLRQKVMEKLNQMPISYLDKKSSGD LVSRVTTDAEQLSNGLLMVFNQFFIGILTIIITIVTMADIDLLMLGLVLILTPLSLFLAR FIAQKSYHLYQNQTKSRGQQTQYIEEMIRQESLLHTFNAQDMAIDTFTTINDTYADYSQG AIFYSSTVNPSTRFINSLIYALLAGVGALRIMSGAFTVGQLTTFLNYVNQYTKPFNDISS VLSELQSAIACAERLYAILDEEIEPLPVKAHLNADSIQGQIEFKDVSFGYTSQNTLINHL NLSIPAASKVAIVGPTGAGKSTLINLLMRFYEVNSGAIYLDGVSMADYSVSELRQQIGMV LQETWLKVGTIHDNIAYGNPDATREEVIAAAKAANADFFIRQLPNGYDTYLADAGASLSQ GQRQLLTIARIFVKLPKILILDEATSSIDTRTEVLIQEAFEKLMQGRTSFIIAHRLSTIQ SADFILVMVDGDIVEHGTHDDLMAKQGVYYQMQTAQAG >gi|304426473|gb|AEEM01000013.1| GENE 81 79322 - 80776 1282 484 aa, chain - ## HITS:1 COG:SP1382 KEGG:ns NR:ns ## COG: SP1382 COG0366 # Protein_GI_number: 15901236 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 1 483 1 482 484 700 70.0 0 MTNETLMQYFEWYLPNDGKHWQRLAANAPELAQKGISKIWLPPAFKATHAGDVGYGVYDL FDLGEFDQKGTIRTKYGTKADYLAAIASLKENGIEPLADVILNHKAAADHTETFTVVEVS PEDRTEVLSEPFEIEGWTNFTFAGRHKTYNDFEWHWYHFTGTDYDVKTGKTGIFQIQGDN KGWANQDLVDDENGNYDYLMYADLDFKHPEVIKNIYDWADWFVQTTGIAGFRLDAIKHID SFFMGNFIRDMKLKYGDDFYVFGEFWNGDEQSNNDYLENTDYRFDLVDVRLHQNLFEASQ EMEAYDLRTIFDQTLVKNHPDFAVTFVDNHDTQRGQALESTIAEWFKPAAYALILLRQTG LPCIFYGDYYGISGEFAQENFKKEIDQLLQLRQTAVYGQEEDYFDDPNCIAWTCLGDDEH PTALAILISNADAASKRLFVGEKWANHIFTDALENNQTEVTIDAQGYGVFPVNEKSVSAW VPNH >gi|304426473|gb|AEEM01000013.1| GENE 82 80930 - 81544 303 204 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1044 NR:ns ## KEGG: GALLO_1044 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 199 1 199 207 388 96.0 1e-107 MMKNPWETIKLDDYENHMKLASVSQLQAMNQMMKGQLDYPVSSVMILGVAGGNGLEHIQK TRFKKVYGIDVNQHYLDQTAERYVDLADILDCRRVDLTADLANLPRSELIIANLLIEYIG YSSFQKIIQKVAPKYVSCIIQQNPQKDVWVSDSPYLHSFDCLDSVHHQIETSKLTETMSN IGYIKIKTSCYRLPDKKSLDSIRL >gi|304426473|gb|AEEM01000013.1| GENE 83 81589 - 82197 277 202 aa, chain - ## HITS:1 COG:L114884 KEGG:ns NR:ns ## COG: L114884 COG0398 # Protein_GI_number: 15672877 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 6 202 4 201 201 128 39.0 6e-30 MRFLFNNYKLVQRLIHIISAVVFIASCLFMIWLYQHGYLTNQAKLQTLVGQDKFLGALFF TLLQMMQVVVPIVPISLTMVLAVMTFHPVVGILPSCIGIILGSTILFLLTRWYGKRFCLL FVKEETFKKYEKLVATHKSFTIIFILCMISPFAPADLLVMLAALSNMSFKTFSKIIILCK PISIIGHVLILIYGGEWALHFL >gi|304426473|gb|AEEM01000013.1| GENE 84 82870 - 83682 597 270 aa, chain + ## HITS:1 COG:SP1187 KEGG:ns NR:ns ## COG: SP1187 COG3711 # Protein_GI_number: 15901052 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pneumoniae TIGR4 # 1 270 8 277 278 319 58.0 3e-87 MNNNVTLAQDVNGEEVVLIGSGIGFNKNKGDTINEEKIEKIFHLRTEESKENFISLLKNI PLDFITVTYDVVDYLSKKYHYPVQEYIYVTLTDHIYCSYQALVAGKYKPSSLPDVSSKYP IPYQIGQEALDIYRKNLLESLPNEEVSRIAYHFMNAEGVMILQKEKNLEVRKNILHLIDG VLEKNNIKRTSENSNFYDRFMIHLNYFLDSLDRSENENKSLMEIEKQVRLTYPLAYRIGS DIYDIVTREVGVESYKCEKVFLVLHIQRLL >gi|304426473|gb|AEEM01000013.1| GENE 85 83702 - 84025 476 107 aa, chain + ## HITS:1 COG:SP1186 KEGG:ns NR:ns ## COG: SP1186 COG1447 # Protein_GI_number: 15901051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 105 1 105 105 155 83.0 2e-38 MNREEVTLLGFEIVAYAGDARTKLLEALKAAERGEFDRADGLVKEAENCIIEAHKAQTNL LTKEASGEDIAYSVTMMHGQDHLMTTLLLKDLMQYLIELYKRGVKYE >gi|304426473|gb|AEEM01000013.1| GENE 86 84018 - 85721 2045 567 aa, chain + ## HITS:1 COG:SP1185 KEGG:ns NR:ns ## COG: SP1185 COG1455 # Protein_GI_number: 15901050 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 1 567 1 563 563 904 84.0 0 MNKLIEFIEKGKPFFEKLSRNIYLRAIRDGFIAGMPVILFSSIFILIAYVPNAFGFYWPS DVETLLMKPYNYSMGLLAMLVAGTTAKSLTDSVNRDMAATNQINYMSTLLASIVSLLILA ADPTADGFATGFLGTKGLLTAFLAAFVTVTIYKVCVKNNVTIRMPDEVPPNISQVFKDVI PFTLSVVFLYALDILARHFVGTGVAEAIGQFFAPLFSAADGYVGITFIFGAYAFFWFVGI HGPSIVEPAIAAITYANIDTNLALMKAGEHADKVLTSGTQMFIVTMGGTGATLVVPFMFM WLCQSKRNKAIGRASVVPTFFGVNEPILFGAPIVLNPVFFVPFILAPIVNVWIFKFFVDT LGMNSFTTNLPWTTPGPLGIVLGTNFQLLSFILAALLIVIDVIIYYPFVKVYDQQILEEE RTGKSNDSLKEKVVANFNTSKADAILEKAGVGSEETPVHNNIVKETNVLVLCAGGGTSGL LANALNKAAAEYGVPVKAAAGGYGAHREILPEFDLVILAPQVASNYEDMKVETDNLGIRL AKTEGAQYIKLTRDGQAALAFVQEQFN >gi|304426473|gb|AEEM01000013.1| GENE 87 85809 - 87215 1209 468 aa, chain + ## HITS:1 COG:SPy1916 KEGG:ns NR:ns ## COG: SPy1916 COG2723 # Protein_GI_number: 15675725 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 1 468 1 468 468 836 86.0 0 MTKTLPKDFIFGGATAAYQAEGATHVDGKGPVAWDQYLKDNYWYTADPASDFYHQYPVDL ELAEQFGVNGIRISIAWSRIFPKGYGEVNSKGVAFYHKLFEECHKHHVEPFVTLHHFDTP LALHSNGDFLNRENIDHYVNYADFCFEEFSEVNYWTTFNEIGPIGDGQYLVGKFPPGIQY NLAKVFQSHHNMMVAHARVVKLYKDKGYSGEIGVVHALPTKYPYNPENPEDVRAAELEDI LHNKFILDATYLGGYSEETMKGVNYILKVNGGELDLREEDFAELEAAKDLNDFLGINYYM SDWMRACDGDTEIIHNGKGEKGSSKYQIKGIGRREAPVNVPKTDWDWIIYPQGLYDQIMR VKKAYPNYKKIYITENGLGYKDKFVDNTVYDDARIDYVKKHLEVISDAIEAGANVKGYFI WSLMDVFSWSNGYEKRYGLFYVDFETQKRYPKKSAYWYKHLTETRVIQ >gi|304426473|gb|AEEM01000013.1| GENE 88 87118 - 87297 72 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVYSMLILRHKSVIQRKVLIGINTLLKQELFNDNSYFLIILLKNYDCMLKDIENLLLNA >gi|304426473|gb|AEEM01000013.1| GENE 89 87361 - 88923 2039 520 aa, chain + ## HITS:1 COG:SPy1204_2 KEGG:ns NR:ns ## COG: SPy1204_2 COG0519 # Protein_GI_number: 15675169 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Streptococcus pyogenes M1 GAS # 206 520 1 315 315 590 92.0 1e-168 MTDNSSLNDVQKIIVLDYGSQYNQLIARRIREFGVFSELRSHKITAEEVRAINPIGIVLS GGPNSVYADNAFGIDEEIFELGIPILGICYGMQLLTDRLGGKVVPAGQTGNSEYGQSTLR LKANSKLFVDTPDEQTVLMSHGDAVTEIPAGFHLVGDSADCPYAAIENTEKNIYGIQFHP EVRHSVYGNDILRNFAFKICGAKGDWSMDNFIDLQISEIRKKVGDRKVLLGLSGGVDSSV VGVLLQRAIGDQLTCIFVDHGLLRKGEGDQVMNMLGGKFGLNIIRVDASKRFLDLLAGVD DPEKKRKIIGNEFVSVFDDEASKLKGVDFLAQGTLYTDVIESGTDTAQTIKSHHNVGGLP EDMQFELIEPLNTLFKDEVRALGTALSMPDEIVWRQPFPGPGLAIRVMGEITAERLETVR ESDAILREEIAKAGLDRDIWQYFTVNTGVRSVGVMGDGRTYDYTIAIRAITSIDGMTADF ARIPWDVLQKISVRIVNEVDHVNRIVYDITSKPPATVEWE >gi|304426473|gb|AEEM01000013.1| GENE 90 89213 - 89314 87 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDYVHMRVLVSPKLTISDFMGYLKITKCFDDI >gi|304426473|gb|AEEM01000013.1| GENE 91 89643 - 92030 1397 795 aa, chain + ## HITS:1 COG:RSc2619 KEGG:ns NR:ns ## COG: RSc2619 COG4694 # Protein_GI_number: 17547338 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 35 700 27 691 767 71 21.0 8e-12 MIEDIASIKIKGGIFEAETDLPIFVRENPKNPEQRFSLIYGKNGSGKSTISRGFRKITGA EEPQIESAEVLDASGSTIPVSEDKKDSIYVFNEEFIEDNIRIDDDGLNAIVVMGAVKDVD DEIKKIQPTYEKCLAEAQAQQEVLNKYLDAENDFCPEYYINEMQKVLKGDNSWASRDAKI RNNKTNSKVRRNTYSQFIRLLPTKSRDELILVYDAMMKKLEAAKSGSKRIETTVPTLKSF ADTENDIVNLLKEKIEKPILTEREKSLFHILQEDCGNQSLTNIRTHFAGPQKTTCPFCFQ DVDEKYADDLVQSIEKILSKKVEEHQDKLLRAKLSIFDLNLMAFNELSQEKVKECEKKIE ALNSLIEQVNELIDRKIENVYNPILNEGFCLKNKYDECLASLEELEKARKEFNEKATDTT PLINELIKVNNEIAYYDLKEPHEKYEKRLEEKEIEEDKSKKLNQRVNALKKQIDELEQEK KNARIAMKAINDDLAYIFFSKTRLRIDYDHDKYVLYSHERLVEPGNVSVGERNAIGLCYF FNRIMENKDEEEVFNSKYLLVIDDPVSSFDMENRIGILSYLKYKLGQYLKGNDKSKFLLL THDMQTFYDMRHFMLELLSLKYGCSEGKAGKYARNLELENKNIATIDVRKRSEYTVLLGT VFDYAKEIDSQYSVSIGNVMRKVMEAFGTFVYKKGMSQLSIDKNIMSNFSKEDQAYYENL MYRLVLNTGSHMEEKVKTIDDMNFFDYISDADKQRTARDVICFLYKINPLHVKAHLQDKE DAVETIETWCKAISV >gi|304426473|gb|AEEM01000013.1| GENE 92 92285 - 92494 190 69 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0732 NR:ns ## KEGG: HMPREF0424_0732 # Name: not_defined # Def: hydrolase, NUDIX family # Organism: G.vaginalis # Pathway: not_defined # 2 69 3 70 163 96 67.0 2e-19 MELWDAYDAHLNVIEGQILVRVEKIPCGVYHLVSEVIVKHSDGTYLLTQRDPRKNLGGMW EATAGGSAL >gi|304426473|gb|AEEM01000013.1| GENE 93 92650 - 92763 63 37 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|171779382|ref|ZP_02920346.1| ## NR: gi|171779382|ref|ZP_02920346.1| hypothetical protein STRINF_01227 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 37 124 160 161 66 83.0 6e-10 MQEGETSAYKWVTCDELSAMSLEKLATQRIQNFIAEL >gi|304426473|gb|AEEM01000013.1| GENE 94 92948 - 93163 266 71 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1052 NR:ns ## KEGG: GALLO_1052 # Name: not_defined # Def: putative transcriptional regulator, AbrB family # Organism: S.gallolyticus # Pathway: not_defined # 1 71 1 71 71 125 95.0 4e-28 MTSEDKKYAWTATVGEKGQIVIPKQARDVFGIKSGDTLLILGNEQKGLAIPPKGAFAELF DMIYDEGGDDK >gi|304426473|gb|AEEM01000013.1| GENE 95 93253 - 94554 1018 433 aa, chain + ## HITS:1 COG:BS_ydhE KEGG:ns NR:ns ## COG: BS_ydhE COG1819 # Protein_GI_number: 16077639 # Func_class: G Carbohydrate transport and metabolism; C Energy production and conversion # Function: Glycosyl transferases, related to UDP-glucuronosyltransferase # Organism: Bacillus subtilis # 51 341 65 360 381 152 32.0 9e-37 MRFYSFDEFSEKIKATGATFISVDRFLPELSEGEMERLKSISTTEMTIQAIRTTCGMNDF LDEQFKDFQPDVVYTDSVCFWGKLAAWKYHVPMVVSTSTFAFNQMSSQYMKYSLSEMTDM IFGLPKISRELKTLKPYGYHVKNALALVQSDNETDSVVYTTERFQPYAESFSDHHLFAGP SVFSKANPAKDTKRPLIYIAMGTIINDRSDLYEKCISALKSLTVDVVISCGRMFDQSSLG KLPDNISIYPYVDQLELLSKASVFITHCGMNSVSESLYMATPMVLYPQTGEQQAVARRVT EMGAGILLTDDGIDGIRTAVEEILRNKNYVKAAEVCSSDFRSSSGVVGAAEFIENAPHTS DGVDILKELNAANGKFQICYWLIVCVVMFLFGIFVRDWTKVWIIGVLAGILAYPIGKVRQ KKYYDKLIERYNK >gi|304426473|gb|AEEM01000013.1| GENE 96 94851 - 95741 338 296 aa, chain + ## HITS:1 COG:L19959 KEGG:ns NR:ns ## COG: L19959 COG1396 # Protein_GI_number: 15674142 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 245 1 246 285 120 29.0 3e-27 MKENLGKSFKMLRESKGLSQKEIAGDIISIAQLSRFERGISSINAETLYNCLENMNVSVE EFQCVCRDFLQNQNAIFQNDVAKAFLEKNTLKLREYLAKYQRLTTIAPEQKFYRLNTIVI KSVLYRCDDFDKVAKKDIQFLVDYLFSVDEWGRYELWLFTYSASLMPSNLVEIFACEMIN RTQFYQEIPENRRLVNQMLFNVIVVCIEKNRLSLAFKLLNYADNLKREETDLFTRNAVKY CRGYYLCKKGNLSGLTIMEKCTEIMIFLECYTIAQQMSDRVTNLKQEKSHLQKEIT >gi|304426473|gb|AEEM01000013.1| GENE 97 95781 - 100073 4968 1430 aa, chain + ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 1131 1390 255 536 2566 104 31.0 1e-21 MKLLGGIMEKKIHYKLHKVKKQWVTIAVTTLALVVGLGAATSTQVVTADETSAVTVTRGS DSPGASVDSSKTQATDTTTSNSDTVTEASTSTTGEDTTIASDDSQKVTDTTTAQGEQKTT KNTAEEVSQTSSTSTDETTPVSAEDEKSTKDPDTTTTTDALSDKVSDKTEETADADKENN SETETSDDKTKDALAEEVSHSAVSETGESTDQLSLDNIKKIDGKYYYVQADGSVKKNFAI TVNGQLLYFDAETGALTSTSTYSFTEGLTNLVDNFSKNNQAYDSTEKSFELVDGYLTANS WYRPTKVLENGETWVDSTEESFRPLVMAWWPDVDTQINYLNSMSEYFGLNKKYSASDSQA SLNVAAEAIQVKIEQEIARRGSTEWLREVISSFVTTQDKWNMNSEDRDTDHLQGGALLYV NSDLTEWANSDYRLLNRAPTYQTGETKYHKADRTGGYDFLLANDVDNSNPIVQAEQLNQL YYLMNWGKIVFGDADANFDGVRVDAVDNIDADLLQIYTNLFEAAYGVDKTEAQALAHISI LEAWSFNDPDYNHDTNGAALAIDNGLRMAFLDALTRPLDSRTNLESLIHNDLGMTDRTVD SAYGDTMPSYAFVRAHDSEVQGIIASIIAGQINPKTDGFTFTLDELQKAFEIYNADMNSV HKKYTHFNIPAAYALLLTNMESVPRVYYGDLFTDNGQYMAVKSPYYDQITALLKSRIKYA AGGQAMNVQYPDGAGAGILTSVRFGYGIMTADQKATDDSVTTSGIVTIVSNNPNLKLNSS DKIAVQVGLAHAGQYYRPLLSPTENGLQVFLNDSDTDITKLVDDNGYIYFTGDEIKGFET VDMNGFLTVWVPVGAAADQDIRVKASTEAKKDGELTYETSAALDSQVIFEGFSNFQDFVQ DPSQYTNKVIAENADLFASWGITSFELAPQYVSSTDGTFLDSIIQNGYAFTDRYDLAMSK NNKYGSAEDLRNAIKALHARGIQVIADWVPDQIYALPGEEIVTATRVNDYGEEREGAQIK NKPYAANTKSSGEDYQAQYGGEFLEYLQENYPELFEKVMISTGKTIDPSTKIKVWKAEYF NGTNILGKGADYVLNDAATGTYFTVTENGAFLPKQMTSDTAQTGFYYDGTGMTYYSTSGY QAKSSFVLYNGNRYYFDENGHMVTGMRDIDGQTYYFLPNGIELRDAIYEDANGNQYYFGK SGNRYAGHYYAFETTSTVDGVTKTTTNWRYFDENGVMARGLVKIGNDYQYYDDNGNQIKG QLVTDKDGNTRYFKADSGAMVTGEFALVNGGWYYFDDNGVAVKGAQTINGQQLYFDENGV QAKGVFVTNEDGTRSYYDAKSGEKFVGDFFTTGDNHWYYADENGNLATGSQVIRGQKLYF AADGLQAKGIFATDAEGNRHFTTQIQVTLLKINLSLMATTGIISMKLVMS >gi|304426473|gb|AEEM01000013.1| GENE 98 100103 - 100369 291 88 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1055 NR:ns ## KEGG: GALLO_1055 # Name: gtfA # Def: putative glucosyltransferase # Organism: S.gallolyticus # Pathway: not_defined # 1 88 1435 1522 1522 140 96.0 2e-32 MYFDENGVQAKGVFVTDANGNKRYYDAQTGEMVVNQTLTVDGVEYTFGADGVAVVNTQDS DEQSESTDETQVTSDDATVAETETSSAE >gi|304426473|gb|AEEM01000013.1| GENE 99 100718 - 101581 366 287 aa, chain + ## HITS:1 COG:L179789 KEGG:ns NR:ns ## COG: L179789 COG1396 # Protein_GI_number: 15673149 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 284 1 283 286 142 30.0 5e-34 MKKTLGKTFKMIRESKGLSQKEVAEGVVSVAQLSRFERGISDVTADVLYICLQNMNVTMD EFQSVYHNFVQPQNTFLQNDISEAYLEKNILKLEKILENCKKLEERFSNYKLYKLNTLVV KAILSQCTKQEKINKKEIQYLVDYLFSVEEWGRYELWLFTNSASVMTVRLLETFAGEMVK RTQFYQEIPENRKLIIQMLLSVISVCIEKEHFSVALKLLNYADRLKKPEIDFFENAVIRY YRGYYLFKMGNSDGLATMEKCTEIMMFLDCYNVAQQMQDTIAKLKSN >gi|304426473|gb|AEEM01000013.1| GENE 100 101674 - 106311 5723 1545 aa, chain + ## HITS:1 COG:CAC1079_2 KEGG:ns NR:ns ## COG: CAC1079_2 COG5263 # Protein_GI_number: 15894364 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Clostridium acetobutylicum # 1103 1519 243 678 2566 146 31.0 4e-34 MEKKVHYKLHKVKKQWVAIAVTSLALVGLGVSVPTQSVSADTTDTTTLVSDDSGADTAVD SSTSQSQDVTVADVQDTSTVADDGTTTDSTVSTDDSQDVTDVVTGDADQQTTTSAAVQAS QVTSTDTEATTTDTTDEATVNQTADDSDDTTTDAVDTTTAVTADLAGEVSRSAVTETGAD ANQLSLDNIQEIDGKYYYIDEDGNVKKNFAITVDGQLLYFDAETGALTSTSTYSFSEGLT NLVDNFSINNQSYDSTEESFELIDGYLTANTWYRPTKILENGETWVDSTETDFRPLLMAW WPDVDTQIDYLNYMSDYFDLGTTYSADDSQASLNLAAEAVQVKIEQEITRQENTAWLREI ISSFVTTQDKWNINTENEGTDHLQGGALLYVNSDLTPWANSDYRLLNRTPTYQTGETNYF KADRTGGYEFLLANDVDNSNPVVQAEQLNQLYYLMNWGSIVFGDDDANFDGVRVDAVDNV NADLLQIYTNLFEAAYGVNESEAQALAHISILEAWSYNDPDYNHDTNGAALAIDNGLRLS FLYSLTRPTDERSGLEPLITSEIGLTDRSEDSAYGDTMPSYVFVRAHDSEVQTIIASIIA EQINPETDGYTFTLDELNQAFEIYNADMNSVDKEYTHYNIPAAYSLLLTNMESVPRVYYG DLYTDNGQYMATKSPYYDQITTLLQARIRYAAGGQSMAVTYYTPASSMSTDNADSVLNET GVLTSVRYGYGIMTADQEATDDSVLTSGIVTIISNNPNLQLDDSEVIAVQVGVAHAGQYY RPLLYPTADGLQSYLNDSDTDITKLVDDNGYIYFTADEIKGYETVDMNGYLSVWVPVGAD ENQDIRVSADTSAYTEGELIYQATAALDSQVIYEGFSNFQDFVTSDSEYTNKLIAENVDL FTSWGITSFEMAPQYVSTDDGTFLDSIIQNGYAFDDRYDLAMSQNNKYGSAEDLRNAIKA LHAAGIQVIADWVPDQIYSLPGEEVVTATRVNDYGEETEGAYINNTLYVANSKSSGEDYQ AQYGGEFLDYLQETYPEMFEVAMISTGEPIDPSTKIKIWKAEYFNGTNILGKGAGYVLSD AATGTYFTVTENGTFLPKQLTTDSAITGFYYDGTGMSYFSTSGYRAKASFIVYNGYYYYF DDNGYMVTGTVEINGKTYYFLPNGIQLRDAIYEDENGNQYYFGPLGNQYFNNYYSFDVEE VVDGVTTTVTKWRHFDENGVMARGLVEIDGVYQYYDENGYQVKGELITDADGNLRYFKED SGEMVVSDFVKIGDNNWYYFDENGIAVTGAQTIAGQNLYFDDNGVQAKGAFVTNADGTRS YYDADSGEKIVADFFTTGDNDWYYADENGNLVTGSQTINGQNLYFAEDGLQAKGVFVTDT AGNIHYYDANSGELAVNTFVGDGDDWYYFDENGIAVTGAQVINGQHLYFADNGIQVKGEI VTDANGNRYYYDADSGEMAVNTFVEIDGVWYYFGADGIAVTGAQVIDGQNLYFNADGSQV KGDVVRINGLRYYYDANSGEQVRNQWVTLPDGTVVFFNARGYTWG >gi|304426473|gb|AEEM01000013.1| GENE 101 106480 - 108162 1825 560 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1058 NR:ns ## KEGG: GALLO_1058 # Name: not_defined # Def: putative glucan-binding protein, peptidoglycan linked (LPXTG motif) # Organism: S.gallolyticus # Pathway: not_defined # 1 560 1 560 560 805 97.0 0 MFKKSKETFYIRKLTIGVVSVAVAGLLVINNAQVNADETTTDTVEQVATDTELTESDLIQ AQADQDQAITEAQAAGVEVTTEDTVTTSDLSEAVTNTVADTEAIQDATAQQEQNNADYAV AIENYNQEVADNQATYEAAVADYEAKITEDGYLSEAAGQSLIFESGSEPNTVAEVDNNAT AVDQATALAWVEANAVEDKDIIANDIISNPNYISSGSYYFLQQGIPTVVTYNNLENTYFN TTKVASVVYTYTLESPESGDQVLVKFFNDPTNTIDVISLNQTTQIGMDVQFLDENGEAID VSGALLSFASLNSGAVYDDESESYVLNSDEYVTNFDGDYIAINGSSVSYNASENRAYAAT SNESLEQGSRFEQNEWDGTELSWYGAIVGVVGDDGEIHFSFGSNNRSTQWFAFNSSVKAY SVPVLETVEESTLQVVSVSYTPYQYQAPTSSLDDIIVSEESLDDPETTVLNPTTDDISAD VDDELNTDDEVTASDTAVIVPRQEVIDNALDPVSSVTVSDAYIADTLPKTGTEKQSLLAI LLGTLLTLSGLIGIRKKADK >gi|304426473|gb|AEEM01000013.1| GENE 102 108375 - 109598 1024 407 aa, chain + ## HITS:1 COG:CAC0847 KEGG:ns NR:ns ## COG: CAC0847 COG0534 # Protein_GI_number: 15894134 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 1 406 40 450 459 201 30.0 2e-51 MVGQLGKTAIAAVEVGGKPEFVFAFVSGAIATVTGIMVSQYMGKNDQKKINTSMSVNLLV MMILAVFTMSVCFFLPHMISGIFTKDTTVIANAADYIKILALVYPLSGISSILAVQMRCH NHAEYPLYISAVAAVVNTALNYLLIFGHFGFAPMGVKGAAVASLMSQIVNLLLMIYYYRK ICSFAVDLHMDSVEIRQYAVMLLPIVINEFLWTMGQNVNTYIYGHMGTSELAGMSLTGPI QGLFIGALSGLSQAAGILIGRRLGKRDYDKAYEESKQLCLYGLVGSLILSITLIATKGLY IGLYNVEADVSQVGSQLLVAFAILAPIKVQNMILGGGIIRSGGRTKYIMIIDILGTWLIG VPIGLLTGLALKLPIVWVYFLLSQEELFRLIISIIMFRSKKWMNTIR >gi|304426473|gb|AEEM01000013.1| GENE 103 109689 - 110963 378 424 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1060 NR:ns ## KEGG: GALLO_1060 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 424 1 424 424 702 98.0 0 MKIEKEENFEEERSYLINERNVDENLILELEKEVIKEVERKEQARKINLFNTRHSKKILD NYKLVLVYFYDRKSDTLYFRNVVKYDAVNYTRSNVIHLFVGGIVLLLGLYSRLHSGDIKQ LKIVIFLGIYVVLSGALFFIVHCYKDLKYSKLDRKNWFDGFLKPSLVFTRLAYLGYSLCF IFYLVFQLYIWVVYFEVYDGKGIIGFAFYLYLIYFAIILIKLFLNIMQMDIVLAILTVLF PLILGTITDKNWNLAALFITLIYLLISKDIWRLQAGRTEPHLRYNLDDEVIKNNIYRSKV LISVMSIIVYLIFKLLNVVEDFIGGSIYLKIILKLTDTHMPKDVFILTLYSGLDKIFILM ILISISAIIGDRMKKKYLAPTIEAIVNSIEKQIYKETETNEAEELTKKLDDWKKASKRNH RKKK >gi|304426473|gb|AEEM01000013.1| GENE 104 111020 - 111181 282 53 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1061 NR:ns ## KEGG: GALLO_1061 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 53 1 53 53 78 100.0 1e-13 MTEQEKVKMIVDKYGESFSELSNNGTAKELKTVMKYIADQANKRQRQLVGLED >gi|304426473|gb|AEEM01000013.1| GENE 105 111325 - 113073 1048 582 aa, chain + ## HITS:1 COG:YPL245w_2 KEGG:ns NR:ns ## COG: YPL245w_2 COG3410 # Protein_GI_number: 6325011 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Saccharomyces cerevisiae # 397 574 1 169 175 114 39.0 6e-25 MPLQDKYSPIIGKVNYNSFSVKAIKELDFSEKDEQLILDYPTVYIIDDKISDKKHNYNVY VGETTDINRRTKQHLNDDIRNGREDFKKLSDSSTTEMYIIGHKYFNKSLTLDIENRLLHY LLSSESVKNVNNRRGNPQNDYYTSEIMDSVFSKIWRKLHSLNNVLFPIESVIRDSALFKA SPFHKLTKEQKEAKSKIILQILSSLTQNLDGQLILVEGEAGSGKTVLMSSLLYDLFNSNE FPVSKDKMSIHLLVNHEQQLTVYQQMAKKLGLKNKNGIDVVIKPTSFINYQSKNNLKADV VIVDEAHLLLTQGKQSYRGKNHLKDLLANAKVVVAVFDENQILTTEQIWESADLAEMKLD AQCVISLRDQMRINAQQSTIDWIRSLVDEQVIYPFRKDDKYDFRVFDSPQEMYDAIKEKD QHQENGISRMLATYDWKFKQKGKPEDNQYWNVTIGDFSMPWNLQLPKDKATKNLSWAEQK QTIDEIGSTYTIQGFDLNYAAVIIGPSVKYRDGKIIFDPSASCNEKAIRNRTLADGTRMK FGETLLKNELNVLLTRGVNGLYLFAVDEELQKALKEAIEKIE >gi|304426473|gb|AEEM01000013.1| GENE 106 113574 - 115256 834 560 aa, chain + ## HITS:1 COG:mlr8165 KEGG:ns NR:ns ## COG: mlr8165 COG3593 # Protein_GI_number: 13476749 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Mesorhizobium loti # 61 554 175 601 608 116 24.0 9e-26 MLSDATVLDAEGNEVLLLSYKFFPHIDEFGKKEYQYEVYMRDDMSRKFGSRERKYLNIKV IKALGDVEADLRNSKKSPVKKMLDDYKISKEVLENIASEYKECGDRVLDLDEINDMTMHI NERFSEILGNHDYDISLQAMEVDPTRVLGSLKMLMANRSVLDSSLGLDNILYISLVLQML KDKTVPTFVSGSEYSELLTKENSEIIDECYISNAGGNYVLRTDLNEENYASLYTFMADNG HGNNAVTLLAIEEPEAHLHPVYQRLIYKDVINRNGFPILLTTHSTHITSVVPIKSLVHLH QEAGNTVAHSTASMPMLEGEFLDVERYLDVKRGEIFLGKGVILVEGIAEEYIIPKLAELL GKPLDEKGIVVCNINCTNFKPYMKMLNSLSIPYAVITDGDFYIENVDDRDDSNRNYHVME KDVKDNDTCGSLGRENAIKTFEALDDSVPENVDLALYFSERGYFIGKYTFEVDMMECTST EAGERAFTDTFDQLVESSRKQNNFKNRLENQDYEFCLRRIEDQSVGKGRFAQIFSGKCVT DNCPDYVKNAIEYIYAKVDE >gi|304426473|gb|AEEM01000013.1| GENE 107 115253 - 117082 555 609 aa, chain + ## HITS:1 COG:BH0648 KEGG:ns NR:ns ## COG: BH0648 COG0210 # Protein_GI_number: 15613211 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus halodurans # 7 576 13 633 747 148 27.0 4e-35 MSTTTYIEKLSRIEKDEYQKAAFDSQSNTVVLAGPGSGKTTVLTLKAMHLLNGVIAEPRG LACLTYSREAAREFTERLKELGLVRGNNIFLGTVHSFCLTEILGKFCDVYSLNIPTPIKI ASEKQRAKLFEIAKKNVGCNDKYFKIERMNCTRMLSISGVSNICVDRDETAEIIANEYEK LLNQAGVIDYETIIIESTKLLQENPYVRECISAKYPWLLIDEYQDLGRPLHEMVLTLIDN TKIKFFAVGDPDQSIYGFQGAVPDYLIELADRPDVQKITLLNNYRSNQDIIDGSELVLNQ QRGYVAKTRENEDAVYKFIEVNEELDDQIEYFVKRIVPGLVKNGIPYEEIAVLVGNNSEC NSIALRCQKENIPYYIVKHQFNRSDFVKWVENCASWIEGDKDIVFSDIGDFWISLITVNG AMYLTDEEKLIIRERLYKVLVESKDYEKSLTKWFEYVRKELCFDKYLEQNTYFQDEKDNI DNLMKEMSGSEYKEYGIDKFSKIGKPENQIVISTRHSSKGLEFEAIVMMGMEEDHFPSYY VKNDARLLAEANRLCFVCVSRAKRVCILMKSSYYTIKTKNGPWRKEFKPSMYWNILYSKY GNINTKKLH >gi|304426473|gb|AEEM01000013.1| GENE 108 117145 - 117843 621 232 aa, chain + ## HITS:1 COG:SPy1202 KEGG:ns NR:ns ## COG: SPy1202 COG2188 # Protein_GI_number: 15675167 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 232 10 241 241 353 75.0 1e-97 MVPAYIRIHDAIKKEIDGGVWEIGQRLPSERDLADDYEVSRMTLRQAITLLVEEGILERR VGSGTYVASHRVQEKMRGTTSFTEIVRSQGKTPSSQLISYQRKPANETEIQQLQLKATDT VVRMERVRFADNVPLVFEVASIPEKLIQSFNQEAITEHFFQTLTDNGYEIGKSQQTIYAK NASERVANYLKVPKNHAVLALTQVSYFTDGRPFEYVHSQYVGDRFEFYLENN >gi|304426473|gb|AEEM01000013.1| GENE 109 117947 - 118222 310 91 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1066 NR:ns ## KEGG: GALLO_1066 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 91 1 91 91 102 100.0 6e-21 MELKSDLSAAQQQATALTTAKDQLLADASSVTLDEQTTVQGNPKARAVIQRSGEMANQMK TAVTTTMEHLHSVASDFEAVDQEGAQAIKGE >gi|304426473|gb|AEEM01000013.1| GENE 110 118224 - 118532 490 102 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1067 NR:ns ## KEGG: GALLO_1067 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 102 1 102 102 139 100.0 2e-32 MKRVEIEQQLEETYVARRKTAELQETYEYYSGIAAQSEEFFWQDGYQSHYAPRFEMTLEL TSRYRHHLIGETDEALAELKKQEDDLEDALVDLLRKEAQDEH >gi|304426473|gb|AEEM01000013.1| GENE 111 118522 - 118935 331 137 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1068 NR:ns ## KEGG: GALLO_1068 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 137 1 137 561 239 100.0 2e-62 MSIDMILEDSQSQAQTTTSYCQHQLEGYQAIQQAINQFVSDTESLKGKAYDSARTFAETV LQALARGGELYEETLSQLISKLPNDYIEMVDGKTWREDDLIQRIDQQQQCLNVLEEAELQ LSLISVMSLERKTSLHQ >gi|304426473|gb|AEEM01000013.1| GENE 112 118954 - 120207 1257 417 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1068 NR:ns ## KEGG: GALLO_1068 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 417 145 561 561 758 100.0 0 MHAELKQTYEEILEKLYAFDTYSASIFDSLADIDTQMTLGLSQIDQSWNAQTGTFQTMAN MSWATVLNNQYAVKDVKATTEEKAFMANLMTQYGFDAETAQIILEVKRGIDKEFPKLSQD ERDYLLLRLIGSVSYGAVNGTTDEILWNTTAGDLATYFYHEKSTASGNFVYRVGMTYDEI MAKLGISAEDSETLYKNLTLQHGLSGEDRDLNTMDDDDLYKYAKEISQNYKDSKGIDITV DEVLAGMETMYHKADFTHQSITMATHLRPSTYPLINGQVEDLAGWEGDTTRNANERDPSI GIDDYLADLDAVNLTSRMSSGQSYMTALNSYQSELRAGKTTREAEFKQNIDLEEVKTTIF SSLVPKEVVAINPVTGAPIYASVSEDEAMAYLQENYEGSYLFIQSLEEEENLFGEDN >gi|304426473|gb|AEEM01000013.1| GENE 113 120227 - 120790 458 187 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1069 NR:ns ## KEGG: GALLO_1069 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 187 13 199 199 338 100.0 6e-92 MLGLIIVVALSGYWFSVYRSLRNPFDEMIYSETQSTKVTLFTPLSTVVGSNRHFKASDDF ISLDYDENLLNDDESMYTFISPSILSFTYSVNIEEDVKVVVAYSYRAKNARLTQSVHLSD QKKTYHGDDLLTQLSAYGKDLDWLQTTSQTVLEDDILGLWFKKGSHRYSLNNLGDLTITY DDVLNDN >gi|304426473|gb|AEEM01000013.1| GENE 114 120837 - 121430 456 197 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1070 NR:ns ## KEGG: GALLO_1070 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 197 6 202 202 394 100.0 1e-109 MQKLKKWLIFSMSLVALCLGYFAVRHYIIHNIFDEIYYNQQNSLGTSALEKIEGVYNPIS RRPNGDSLTHEWYDEEHLPDSVTSLGYTFGYSEGCFAFEVKYDVGNGSSRTLNINYEYDV KSRILYRELWVLDEATPNNNKEYVQTFLEEYGSSIDECITFGDNVVKNVLLKDWCSVYNS RYSPDAWGDVTVKSRWE >gi|304426473|gb|AEEM01000013.1| GENE 115 121613 - 122461 718 282 aa, chain - ## HITS:1 COG:BH3576 KEGG:ns NR:ns ## COG: BH3576 COG1737 # Protein_GI_number: 15616138 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 3 255 6 257 284 97 25.0 2e-20 MGIIADLENQTTFTELEKELSNYILEHLNDIPQLTISQLAQQSFTSNATVNRLCKKLGVA GYKAFRIALAAELEKQRFSKSHVDFDNPFSMSENTANIFKNVASISKEAIDICYASVSQD LVAKAAQQISKAKRVYIFATGDSYLVGLSFSNMLVKLGIQAIMVNQFHDSIAVIYHSNKD DVILFLSYSGNILNAYAQELKLIQARHGKTILISSKAFKDKIDLNITFPAKESIVNKAGG YYSQTAMHYILNCLYSLLYTSNYFTNRKQKNAIENLAKKDLQ >gi|304426473|gb|AEEM01000013.1| GENE 116 122631 - 123614 1015 327 aa, chain + ## HITS:1 COG:SPy0441 KEGG:ns NR:ns ## COG: SPy0441 COG0673 # Protein_GI_number: 15674565 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 311 1 312 319 259 42.0 7e-69 MKLGIIGAGLIVEEFLPKLVQIEQLEILGIQSVPSDMDKLKQWCTKYNIPLATSDFEELS QSGIDTVYIAVPNFLHVSFVEKALNSGLNVIVEKPMTSNAKEAQHLKELAQSKGLFLFEA ITTRYFKTYQKIREWLPKIGQIKLVESNYSQYSRRYDAFQKGEVLPVFDPAKAGGAMMDL NLYNLHFVMGLFGQPDNQHYFANVERGIDTSGVAVLNYPDFIAVCTAAKDSKGKSGSLIQ GTKGYIETTLSPNLVGEVKLVLNDGSKESFDDGLSQARLIPEFQAFVKMINDNDLEACYK ELEASLSVSKVQTQLRKEAGIIFPMDN >gi|304426473|gb|AEEM01000013.1| GENE 117 123619 - 124143 367 174 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1073 NR:ns ## KEGG: GALLO_1073 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 174 1 174 174 293 97.0 1e-78 MANETILEKTKGYYKTEHLEELEKLEHQLRFQSFGSQEALALGGKILKNTEQAEKLAIQI IRVSDKVPIFQYVGNQAKERNLSFVQGKIKTVLKTEHNSLWALVAHHVGEMTLTETEIHS QLPVSGAFPIKVGEELVAVVGLSGLKNGDDFRVLVAGMADYLSVQAEPFTGFLI >gi|304426473|gb|AEEM01000013.1| GENE 118 124164 - 125222 1014 352 aa, chain + ## HITS:1 COG:lin0375 KEGG:ns NR:ns ## COG: lin0375 COG0673 # Protein_GI_number: 16799452 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Listeria innocua # 5 352 2 338 338 415 60.0 1e-116 MTKRLTIGYYGNGKSTNRYHLPFLMRRQDTIFVKTIYAPTLRDDWARWEGVHYTDKLDDL LNDPEIDVVVVTTPAPAHYETAKQVLEAGKNLVLEKPFTQSVKESQELFDLAREKGLMIQ GYQNRRFDSDFLTTQAVIASGKLGDLLEVEMHYDYYRPEVPENVTQYSKDESYVYNHACH TVDQVISYFGKPDDVHYDVRQLLGAGRMNDYFDIDFYYQNSTDTFHVAPGGLKVSVKSSY FRVKERPSFVVYGRKGMFVKYEKDRQEADLKKFYLPDNDDFGLDKPENFGTLTYYDDNGH YHEKAVETVAGDNGRFYDTLYETLINHKPILVTEEQTILQIHILEEATKDLK >gi|304426473|gb|AEEM01000013.1| GENE 119 125292 - 125549 287 85 aa, chain - ## HITS:1 COG:SP1740 KEGG:ns NR:ns ## COG: SP1740 COG4115 # Protein_GI_number: 15901572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 85 1 84 84 99 60.0 1e-21 MIKAWSDDAWNDYMYWYNQGNKATIKKINRLIKEIDRTPFTGIGKPEPLKHDLSGKWSRR ITDEHRLIYSVDETTIYFYSCKDHY >gi|304426473|gb|AEEM01000013.1| GENE 120 125542 - 125808 410 88 aa, chain - ## HITS:1 COG:SP1741 KEGG:ns NR:ns ## COG: SP1741 COG2161 # Protein_GI_number: 15901573 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Antitoxin of toxin-antitoxin stability system # Organism: Streptococcus pneumoniae TIGR4 # 1 84 1 84 84 77 52.0 7e-15 MEVVAYSNFRQNLKHYMKQVNDDAEPLIVTSKNIDDTVVVLSKRDYDSMQETFRIMSNNY LMNKIKRGDEQFKAANFQTHELLEVDDD >gi|304426473|gb|AEEM01000013.1| GENE 121 125972 - 126304 327 110 aa, chain + ## HITS:1 COG:SP1288 KEGG:ns NR:ns ## COG: SP1288 COG2739 # Protein_GI_number: 15901148 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 110 1 110 110 159 90.0 1e-39 MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEEFGVSRQAVYDNIKRTE KILEAYEMKLHMYSDYIVRSQIFDDILEKYPDDKFLKEKISVLSSIDNRD >gi|304426473|gb|AEEM01000013.1| GENE 122 126375 - 127940 2198 521 aa, chain + ## HITS:1 COG:SPy1200 KEGG:ns NR:ns ## COG: SPy1200 COG0541 # Protein_GI_number: 15675165 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 510 1 509 519 827 89.0 0 MAFESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKRVRERA VGHEIIDTLDPTQQIVKIVNEELTEILGSETAELEKSPKIPTIIMMVGLQGAGKTTFAGK LANKLIKDENARPLMIAADIYRPAAIDQLKTLGSQINVPVFDMGTDHSAVEIVTNGLAQA KENHNDYVIIDTAGRLQIDEKLMEELRDVKALANPNEILLVVDSMIGQEAANVADEFNKQ LDITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANN PALKNFKVDEKAVARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNSFVEVNKFIKDF NQAKQMMQGVMSGDMEKAMKQMGINPNNLPKNMPNGMDMSSLEGMMGGNGMPDLSALGGG DMDLSQMMGGGLKGKVGEFAMKQSMKRMANKMKKAKKKRRK >gi|304426473|gb|AEEM01000013.1| GENE 123 128006 - 129022 578 338 aa, chain - ## HITS:1 COG:SP1433 KEGG:ns NR:ns ## COG: SP1433 COG2207 # Protein_GI_number: 15901285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 17 326 17 329 330 174 35.0 2e-43 MTSIFFNHAGKEAIPLKNCVRFAPHGQTYHLVNDEVDGFFWEYKTDYFAITIFDFHLKKT LSYAYQLEDFSKYVAFSSHIMCANGEILPPYQQLSSNQSLVLFNQHQTLQTHLHQHSNYY AVNIDFTQKMVDEYLVGQYQLNQDEIFQIFQEANSFIGGRFGKIADEIINYKVSSIGSEL FYEIKAKEWLSIIINDYYNRQNEKQISRDDNLALENVKHYINDHLTTTIPQDLLAKIAMM SKTKLKDSFKLKYNMTLTEYIQRRRMSLAEQLLTITQLEIKEVAIAVGYHSHSRFSSLFK KYIGVYPHDIKKQTSFVQKRLPCDNCQNKICKSQKLAE >gi|304426473|gb|AEEM01000013.1| GENE 124 129196 - 130935 219 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 336 556 279 507 563 89 28 1e-16 MFKVYKKLFSYVPEYKFMAYLAILLAALLSILSIGAFYFVYQFLNRLIVQNNATDSAFYA MIIMVMMVASILIYMFAGGLTHLVAFRLETNLRKKGIDALTTSNFSYFDTTTSGKIRKTI DDNAAETHTIIAHLIPDNTTSFVTAVVLLGITFAINAYMGIALLVLAAVAIFQIKNMMGN AEFMKSYMQSLENMNSETVEYVRGMQVIKIFKTSVQSFKALYQAIKDYSDYALNYSFSCR QAYVIFQVMFAAYTVLFIPIYTALVPQSQHLESVPQFIFFFCAVGLMYLTSMKIMYVFMY LYKGDISAEKIETICEEMTSNRVSTGQEEAFADGSIRFENVSFGYEEQNIIEDLSFTLDE NKVYAFVGSSGSGKSTIAKLIAGFYKINSGSILLGGKPIENYRQEALMKHVAFVFQQSKL FKMSIFDNVKLGNPKASYEQVMNALKLASCQEILDKFPERENTVIGSKGVYLSGGEQQRI AIARAILKDAKIVILDEASAATDVNNEYQIQKAFANLIANKTVIIIAHRLSSIKGVDEIL VIDKGAIVERGSDQELTAAAGRYKHFKELYASANEWRVS >gi|304426473|gb|AEEM01000013.1| GENE 125 130932 - 132665 1505 577 aa, chain + ## HITS:1 COG:SP1435 KEGG:ns NR:ns ## COG: SP1435 COG1132 # Protein_GI_number: 15901287 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 1 573 9 581 581 563 51.0 1e-160 MKNKLQNVFGVTENGANNVIKACFTAILVFIAEMAPIGLLVYYVQNVIEGHPLSLSTAII GLIAIIVVAYCFMYIDYNATYTATYQESFDIRVNIAEILQKLPLSYFSQRDLTDLSQTLM SDVERLEHALSHAISKTVGFVIYFTLVTIAMLFFNVPLSLCILIPVLVSAACLIFSKKAQ EKAVTKYWKQLRANSDSFQEAIELQQEIKAYNLAEQFHDSLYQQMEDSERIHIKSEFTQG MPLSIANPLVRLTIGIVIFFGSTLYFQGKVSLIVFIVYLLLAIKISDALQNVYFDVAEIF YINSAVKNINTLRNIEQQIGEDVALETFDIELKDVKFGYKDAQQVIKGVSFTANQNEITA LVGPSGCGKTTLLRLVSRLYDYEEGQILVGGHDIKQISTNSLFDKISIVFQDVTLFNNTV LENIRMGRPDATDEEVKEAARLANCQDFIAKLPQGFDTKIGENGAKLSGGERQRLSIARA ILKQAPIVLLDEITSSLDIENEKLIQESLNYLLKDKTVLIISHRLKSVENADKIVVLKDG QIDGIGRYTDLLESSAVYRELIETSQKIEDFKYKKNA >gi|304426473|gb|AEEM01000013.1| GENE 126 132680 - 133267 697 195 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1082 NR:ns ## KEGG: GALLO_1082 # Name: not_defined # Def: conserved hypothetitical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 195 1 195 195 340 98.0 2e-92 MKKQSFSVKDLINAGLFSLLVFAAMFVGGIIGFIPIFMPFIPFICALCSGPVFMLYSTKI HRFGMVLIMGTIIGLLFMVTGHGIYVLPGTMLLALIGEYILKKGNYENLNHTRWCFTVYS LASGFMMIPIYITRDAYIQRLIDQGYGQAYADKMMSVLPNWTFLPVLLLGAIGGYLGATI GIKMLQKHFKKLGMA >gi|304426473|gb|AEEM01000013.1| GENE 127 133370 - 133627 154 85 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1083 NR:ns ## KEGG: GALLO_1083 # Name: not_defined # Def: putative ABC transporter, permease protein # Organism: S.gallolyticus # Pathway: ABC transporters [PATH:sga02010] # 1 82 11 92 232 135 98.0 5e-31 MTIVISFVLLFGNLQITYPWVAWCLMALPYMLLLSEKKFGKAFKGIAWLIVALILEKCAV YFSFSGLLASVALFFSIIVLRMHQA >gi|304426473|gb|AEEM01000013.1| GENE 128 133660 - 134037 237 125 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 4 117 31 140 147 68 32.0 2e-12 MSDLVASLQKMKLPDAIIIPISVMFRFFYTVKEDYQQVTEAMYLHGLVGRRFFRQPLRMI EYRFVPLLLCLSRTADDVAISATTRGMVVEQKRSTISNTKLRILDYVLILAMLAVLVLNF WSQYA >gi|304426473|gb|AEEM01000013.1| GENE 129 134030 - 134590 182 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145635097|ref|ZP_01790803.1| 50S ribosomal protein L25 [Haemophilus influenzae PittAA] # 1 182 1 180 205 74 28 2e-12 MLKIKNFTLTYDEPVLENVNLSFKSGEITVLTGTSGSGKSSLLKVINGAIPYFQPAELSG EITYQGKNLLDLDMSERSNIVATVFQNPKTQFYAVNSTDEMAFALENRHLPPKTIFQRIN QFTQLLEMEDLLNRDIFALSGGEKQLLAITSVACMDNDIYLFDEPSSSLDRLTEKLLHAL KKSWLN >gi|304426473|gb|AEEM01000013.1| GENE 130 134596 - 135423 688 275 aa, chain + ## HITS:1 COG:SPy1787 KEGG:ns NR:ns ## COG: SPy1787 COG1122 # Protein_GI_number: 15675626 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 2 274 191 463 464 116 28.0 4e-26 MGKIVIIAEHRLYYLKELMNQLIVIKDKKVTSYPAIDITDDFTKTQNLRQLNEISKTELI ESLPYQKHSKKSQTLPESSDLIYQNYRYKHRDNKDNIFDFNLGLDKGINFIIGKNGVGKT TFLRCLSGLNKTFKGQTFYEKQPVKPTYDWISEVVQDVNYQLFTESVWSEISIVSDDEKA KKDALTQFGLIDKIERHPQSLSGGEKQRLLLAMAKASNKPIIILDEPTSGLCRLQMERMI EDLHDMAKTGKLIIVVTHDYELIKNCSGNIIEFVE >gi|304426473|gb|AEEM01000013.1| GENE 131 135742 - 136812 1118 356 aa, chain + ## HITS:1 COG:SPy1196 KEGG:ns NR:ns ## COG: SPy1196 COG0582 # Protein_GI_number: 15675163 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 1 356 1 356 356 535 82.0 1e-152 MKREKLLEKIDELKEIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYRRFFEWLLDSGISDV TKIADVELTTLEHLSKKDMESFILYLRERPSLNTYSTKQGVSQTTINRTLSALSSLFKYL TEEVEDENGEPYFYRNVMKKIATKKKKETLAARAENIKGKLFLGDETMAFIDYIDTEYQN KLSHRALSSFQKNKERDLALIALLLASGVRLSEAVNLDLKDLNLNMMVIEVTRKGGKRDS VNVANFAKPYLEAYLQIRAPRYKAEKQDQALFLTEYRGVPNRIDASSVEKLVAKYSQDFK VRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL >gi|304426473|gb|AEEM01000013.1| GENE 132 136918 - 137598 822 226 aa, chain - ## HITS:1 COG:SPy1198_2 KEGG:ns NR:ns ## COG: SPy1198_2 COG2932 # Protein_GI_number: 15675164 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 103 226 1 124 124 207 83.0 2e-53 MFSGEKLKNIREEKGYSQAEVAKLLNISRVSYFNWENGKTKPNQKNLNLLSQLLGVEETY FVSEYDIVDTYFKLNKDNRHKLENYADDLLKEQEKIVQLPKYYAYKVFEKLSAGTGYSYF GDGNYDTVFYDEQLDHDFASWVFGDSMEPTYLNGEVVLIKQTGFDYDGAIYAVDWDGQTY IKKVYREEDGLRLVSLNKHYADKFAPYDENPRIIGKIVGNFMPLEV >gi|304426473|gb|AEEM01000013.1| GENE 133 137682 - 138629 654 315 aa, chain - ## HITS:1 COG:L0132 KEGG:ns NR:ns ## COG: L0132 COG0642 # Protein_GI_number: 15673728 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Lactococcus lactis # 4 311 5 289 291 212 38.0 6e-55 MIRQFFKEYSVWYLTYILLSILFIVIFALYRLPLAYFKVSILINLTILIFISIWQYLKFK QKLSILHHFIYVKELDELELPSELAYKDIIIKLKETSANELLNEKTQTENLQNLVKMWSH QMKVPISALSLMAQTDQLDSNEVQQQLTRLQNYLDTLLTYLKFSQNKDDFRFEKLSVRDV TTKIIKKYRIPCLLKNLSVEVVGDWELSSDRKWLSFAISQIIDNAVKYSKTDGTIIISIS DGNIVISDDGIGILEEDLPRLFDEGFTGFNGHEHQKATGLGLYMTKQVLDTLNLNITIDS QIDKGTQVEISSHKN >gi|304426473|gb|AEEM01000013.1| GENE 134 138626 - 139288 460 220 aa, chain - ## HITS:1 COG:L0133 KEGG:ns NR:ns ## COG: L0133 COG0745 # Protein_GI_number: 15673729 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Lactococcus lactis # 5 219 3 222 223 214 51.0 8e-56 MKQGKIYIVEDDETIVKLLKQHLSQTYDVFSVTNFRAIKQEVEEIKPDLILIDITLPYFN GFYWTTEIRKTMTLPIIFISSSDDEMDTVMALNMGGDDFVSKPFSLTILDAKISAFLRRA YQFTSDNYQLDQFSLSRDGILSNGDDHITLSPTENKILAVLFEHQNQVVPKEELLEKLWE NESFIDQNTLSVNITRLRKKTQPLGFDRIHTVRGVGYLLK >gi|304426473|gb|AEEM01000013.1| GENE 135 139376 - 141355 1341 659 aa, chain - ## HITS:1 COG:L190126 KEGG:ns NR:ns ## COG: L190126 COG0577 # Protein_GI_number: 15673731 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 1 659 1 667 667 358 35.0 1e-98 MFYAKLAWSNLKKSVNIFGPFLLTSTILFLLNCSTLLILFSPVGKSMSYGAATLGLSIVV LFIFSIIMEIYSYNFLLKQRSREFGLYNILGMNRFQISLVSTIELIVIFVGVIILGSLLS AVFSQLFYLIFINLLHYNQLVMTLSPAAFISTAFAFAAIFFFLELISLFNIRRSSPLALF RRQEQGEKEPRGNILFALLSIICLSSGYYLSISSTRIAALVVLYRFFIAVVLVIIGTYLF YISFMTWYLKRRRKNKKYFYQPEHFVTTAQMIFRMKQNAVGLANITLLAVMAFVTIATTT SLYVNTQKQADDMFPKDTQTTIYSTTDTDAEAFFKTAVIDKLDKPESDYITYYTGSSVIP VSTDKEITITDQDIDTPDMAKMGSLYIMTQDDFKNLGNSLPTLKENQSAFYVQKGNSQLK KLTLFGKEFDNVENLRSVIFPDIANTYNPALLIVSDKNVLNELQELFTQHNFQFQSNFTG YADLSKAEIAKITNDDGYISDETGQYLDSDGNAATGIIDTKSSFLEDMYGFTGGFLFTGF LLGISFLLGAALIIYYKQRSEGIEDKKSYKILQEVGMGEKEVKRAINSQILLVFFMPLGF AVLHFAVALVMLKQMLLMFGVTSSSMIYTVSGITILSITVIYFFIYKFTSRTYYKIIER >gi|304426473|gb|AEEM01000013.1| GENE 136 141357 - 142109 763 250 aa, chain - ## HITS:1 COG:L192122 KEGG:ns NR:ns ## COG: L192122 COG1136 # Protein_GI_number: 15673732 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Lactococcus lactis # 1 249 1 249 259 334 68.0 1e-91 MLLEINHLEKVFRTRFSKEVTRALQDVDFKVDENEFIAIMGESGSGKTTLLNILATLEKP TKGSVVLNGKEITKIKESQLAEFRLNNLGFVFQDFNLLDTLSVKDNIFLPLVLGRVNYQE MENRLATLAPKLHIEDLLAKRPFELSGGQKQRVAIARSLITNPQLLLADEPTAALDYRNS EDILNLFEDINNDGQTLLMVTHSANAASHAKRVLFIKDGRIFHQIYRGNKTNQEFSKDIS LAMSALLGGE >gi|304426473|gb|AEEM01000013.1| GENE 137 142211 - 142318 125 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVGFYSLITILLIVVVGVVSLALWYWSGRRPLKHS >gi|304426473|gb|AEEM01000013.1| GENE 138 142337 - 142456 143 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQEIKRHINLWSNLLIWLVMVILGSITYIVCYTLRITK Prediction of potential genes in microbial genomes Time: Sun May 29 12:39:04 2011 Seq name: gi|304426430|gb|AEEM01000014.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00024, whole genome shotgun sequence Length of sequence - 42708 bp Number of predicted genes - 42, with homology - 40 Number of transcription units - 21, operones - 13 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 29 - 859 681 ## GALLO_1091 hypothetical protein 2 1 Op 2 . - CDS 892 - 2229 1786 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation - Prom 2325 - 2384 7.2 - Term 2239 - 2273 0.2 3 2 Op 1 . - CDS 2406 - 2888 354 ## GALLO_1093 hypothetical protein 4 2 Op 2 . - CDS 2905 - 3624 430 ## GALLO_1094 hypothetical protein 5 2 Op 3 . - CDS 3624 - 4289 459 ## GALLO_1095 hypothetical protein - Prom 4359 - 4418 7.1 - Term 4389 - 4429 4.0 6 3 Op 1 13/0.000 - CDS 4437 - 6578 2523 ## COG0550 Topoisomerase IA - Prom 6605 - 6664 8.1 7 3 Op 2 . - CDS 6673 - 7320 501 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Term 7343 - 7373 1.0 8 4 Op 1 . - CDS 7395 - 7946 521 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 9 4 Op 2 8/0.000 - CDS 7948 - 8727 796 ## COG0164 Ribonuclease HII 10 4 Op 3 . - CDS 8714 - 9568 836 ## COG1161 Predicted GTPases - Prom 9602 - 9661 8.3 + Prom 9559 - 9618 6.9 11 5 Tu 1 . + CDS 9812 - 10222 331 ## GALLO_1101 hypothetical protein + Term 10229 - 10261 2.1 - Term 10217 - 10249 2.1 12 6 Op 1 . - CDS 10432 - 10749 344 ## GALLO_1102 hypothetical protein 13 6 Op 2 . - CDS 10733 - 10921 209 ## - Prom 11144 - 11203 7.5 - Term 11090 - 11129 3.1 14 7 Op 1 40/0.000 - CDS 11205 - 12572 790 ## COG0642 Signal transduction histidine kinase 15 7 Op 2 . - CDS 12565 - 13251 529 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 16 7 Op 3 . - CDS 13301 - 13975 281 ## GALLO_1105 putative lantibiotic transport-associated permease protein 17 7 Op 4 . - CDS 13968 - 14687 366 ## GALLO_1106 putative lantibiotic ABC transporter, membrane protein 18 7 Op 5 . - CDS 14690 - 15379 279 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 15404 - 15463 6.3 - Term 15428 - 15474 11.6 19 8 Tu 1 1/0.500 - CDS 15479 - 17017 1680 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 17084 - 17143 8.4 - Term 17109 - 17164 5.0 20 9 Op 1 1/0.500 - CDS 17187 - 17741 476 ## COG4720 Predicted membrane protein 21 9 Op 2 . - CDS 17738 - 18598 590 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Prom 18774 - 18833 5.7 + Prom 18634 - 18693 8.4 22 10 Tu 1 . + CDS 18724 - 19986 877 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 20024 - 20067 3.2 - Term 20015 - 20052 4.0 23 11 Op 1 3/0.000 - CDS 20067 - 21002 1160 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 21044 - 21103 2.8 - Term 21048 - 21094 8.2 24 11 Op 2 . - CDS 21105 - 22181 1526 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 22239 - 22298 9.0 + Prom 22203 - 22262 5.5 25 12 Tu 1 . + CDS 22354 - 22482 71 ## - Term 22307 - 22339 2.0 26 13 Op 1 . - CDS 22519 - 24102 1389 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 24128 - 24187 4.7 - Term 24170 - 24211 2.0 27 13 Op 2 . - CDS 24222 - 25892 2188 ## COG2759 Formyltetrahydrofolate synthetase - Prom 25923 - 25982 7.9 - Term 25920 - 25961 3.8 28 14 Op 1 . - CDS 26026 - 27033 809 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 29 14 Op 2 . - CDS 27074 - 28306 1618 ## GALLO_1117 conserved hypothetical secreted lipoprotein 30 14 Op 3 . - CDS 28340 - 28732 214 ## GALLO_1118 hypothetical protein 31 14 Op 4 . - CDS 28713 - 29621 1105 ## COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase - Prom 29723 - 29782 6.8 + Prom 29648 - 29707 4.2 32 15 Op 1 3/0.000 + CDS 29767 - 30453 809 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 33 15 Op 2 3/0.000 + CDS 30446 - 30991 646 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase + Term 31041 - 31088 4.3 + Prom 31005 - 31064 5.5 34 15 Op 3 1/0.500 + CDS 31103 - 31675 473 ## COG4684 Predicted membrane protein + Term 31680 - 31722 2.1 + Prom 31678 - 31737 7.3 35 16 Tu 1 . + CDS 31918 - 33633 2339 ## COG1109 Phosphomannomutase + Term 33651 - 33701 8.0 - Term 33753 - 33790 4.8 36 17 Tu 1 . - CDS 33819 - 35078 1329 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 35135 - 35194 7.5 - Term 35200 - 35234 4.0 37 18 Op 1 . - CDS 35253 - 36221 1118 ## COG4086 Predicted secreted protein - Prom 36245 - 36304 4.9 38 18 Op 2 1/0.500 - CDS 36309 - 36722 638 ## COG0346 Lactoylglutathione lyase and related lyases - Term 36739 - 36777 7.1 39 19 Op 1 2/0.333 - CDS 36780 - 37526 611 ## COG3764 Sortase (surface protein transpeptidase) 40 19 Op 2 . - CDS 37528 - 39984 2989 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 40132 - 40191 7.1 + Prom 40088 - 40147 6.3 41 20 Tu 1 . + CDS 40192 - 41181 1503 ## COG0039 Malate/lactate dehydrogenases + Term 41197 - 41244 11.6 - Term 41192 - 41225 5.1 42 21 Tu 1 . - CDS 41241 - 42608 1652 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases - Prom 42639 - 42698 12.5 Predicted protein(s) >gi|304426430|gb|AEEM01000014.1| GENE 1 29 - 859 681 276 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1091 NR:ns ## KEGG: GALLO_1091 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 276 1 276 276 536 100.0 1e-151 MFPIQLGLKASCDLEQMESRLKYHPDVFEFFTSETDFTASGLQHLREAVQTVKASGVKAI VLHHPMKYQGQFLELVAHSKNKADLVDFINYSTQELLKIARDFDCKVLVHGSYELREKDL LEPFENIEEAQNYLFTRMDEFCELGENHIMFENGISKLFSFGKPEFDQLLAQKGYPLAYD ISHAFIYLHGDNKALQCSLETLKKTIIHYHLVDSLGETHDSLTLGHGKINWAEALLLFNE NATSIYEINLKDLNNPIEQLKSHAYLTKVAQAINSK >gi|304426430|gb|AEEM01000014.1| GENE 2 892 - 2229 1786 445 aa, chain - ## HITS:1 COG:SPy1173 KEGG:ns NR:ns ## COG: SPy1173 COG1206 # Protein_GI_number: 15675145 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Streptococcus pyogenes M1 GAS # 1 443 1 445 448 799 87.0 0 MSQSSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGKKATPQHKTDKFAELVCSNSLRG DSLTNAVGLLKEEMRRLDSVIMKAAESTRVPAGGALAVDRDGFSQMVTDEVTNHPLIEVI REEITEIPTDAITVIASGPLTSDALAEKIHELNGGDGFYFYDAAAPIVDKNSIDMDKVYL KSRYDKGEAAYLNCPMTKEEFMAFHEALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIK TMLYGPMKPVGLEYPDDYKGPRDGEFKTPYAVVQLRQDNAAGSLFNIVGFQTHLKWGEQK RVFRMIPGLENAEFVRYGVMHRNSYMDSPNLLTETFATRQNPDLFFAGQMTGVEGYVESA ASGLVAGINAVRRFKGEEAVIFPQTTAIGSLPHYITHAESKHFQPMNVNFGIVKELDGPR IRDKKERYEKVAERALNDLQDYLNV >gi|304426430|gb|AEEM01000014.1| GENE 3 2406 - 2888 354 160 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1093 NR:ns ## KEGG: GALLO_1093 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 160 1 160 160 275 100.0 4e-73 MHFGFSYVGFIFLMLLMIPNLIWTRNKPKDYEHYQYQENKYLSLLERIGEILVTCLILIF SDFNWQPWTNWNWWLIAASFCLILYEMFWIRYFMGPKRMADFYTTFLKIPVAGASLPILA VLCISIYGKNPFLTLASIILGIGHIGIHLQYQNMIKKDNQ >gi|304426430|gb|AEEM01000014.1| GENE 4 2905 - 3624 430 239 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1094 NR:ns ## KEGG: GALLO_1094 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 239 1 239 239 404 100.0 1e-111 MSITGLSHYLSQNPILTLLLICHFLSDFQLQSQTVADRKNTDKTYLLIHLIWVAVPLILV TIFIPSIWGISLLILLSHSIIDFGKPHVANSFKLNPLVTFLLDQMLHLGIILLLAPLAKG VFLPNFLTGEALNIILFIVLITKPTNVIFKIFFQKYQPENSQKMDTIPGAGATIGLLERI VMSICIIFNQFASIGLVFTAKSIARYNKISESPTFAEYYLIGSLFSILSVLLSAWICLF >gi|304426430|gb|AEEM01000014.1| GENE 5 3624 - 4289 459 221 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1095 NR:ns ## KEGG: GALLO_1095 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 221 1 221 221 423 100.0 1e-117 MNYFALIGDIIDSKKIDNRYQVQKTLETCLNELNIEFKDVLVSKLSITLGDEFQGLLTLD APLFQIIDRINFAMQPYQVRFGLGLGKILTDINPEQSIGADGPAYWHARKAINYIHQKND YGNTQIAVSFEDDTKVNIINTLIASSEAIKSDWRASQEIILQELLKLGIYDEHFDQQILG KQLELSTSALSKRLKSSNIKVYLRTRNCALNLLKNAGEELN >gi|304426430|gb|AEEM01000014.1| GENE 6 4437 - 6578 2523 713 aa, chain - ## HITS:1 COG:SPy1164_1 KEGG:ns NR:ns ## COG: SPy1164_1 COG0550 # Protein_GI_number: 15675140 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Streptococcus pyogenes M1 GAS # 30 592 27 589 589 953 86.0 0 MATTTTTKAPTAVKKSSKKTTKKKTAAKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHI RDLKKSSMSIDFENNYEPQYINIRGKGPLINDLKKEAKKSKKVYLASDPDREGEAISWHL AHILDLDENDKNRVVFNEITKDAVKNAFVEPRQIDMDLVDAQQARRVLDRIVGYSISPLL WKKVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGFFKKGTKKFQASFYGIDGK KLKLETNEDVQKVLALLTSDEFTVAKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKT MMVAQQLYEGISLGKSGTQGLITYMRTDSTRISPIAQNDAANFITERFGEKYSKHGSRVK NASGAQDAHEAIRPSNVNLTPESIAKHLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVNL EQNSVRFTANGSQVKFDGYLAVYNDSDKNKMLPDMVEGDIVKKVSTNPEQHFTQPPARYS EATLIKTLEENGVGRPSTYAPTLDVIQRRYYVRLAAKRFEPTELGEIVNNLIVEFFPDIV DVKFTADMEGKLDEVEEGKQQWQKVIDEFYKPFEKELAKAETEIEKIQIKDEPAGFDCDL CGHPMVIKLGRYGKFYACSNFPECHNTKAITKEIGVTCPVCGKGQVIERKTKRNRIFYGC DRYPECEFTSWDKPVGRSCPKSGDFLVEKKIRGGGKQVVCSNEECDYEEAKIK >gi|304426430|gb|AEEM01000014.1| GENE 7 6673 - 7320 501 215 aa, chain - ## HITS:1 COG:SPy1163 KEGG:ns NR:ns ## COG: SPy1163 COG0758 # Protein_GI_number: 15675139 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Streptococcus pyogenes M1 GAS # 1 212 1 212 278 311 70.0 6e-85 MNNFELFKLKKAGLTNLNILAILDYQEKQEKSLSLRNMAVVSKCKNPILFMEKYKALDTK ELRKEFNCFPSVSILDDEYPLELKHCYNPPVLLFYQGNLELLNRPKMAVVGARTASATGT KSVQKIVKELGNHFVIVSGLARGIDTSAHLSALKNGGASIAVIGCGLDVYYPKENKQLQA YMAKNHLVLSEYVAGEAPLKFHFPERNRIIAGYQI >gi|304426430|gb|AEEM01000014.1| GENE 8 7395 - 7946 521 183 aa, chain - ## HITS:1 COG:SP0074 KEGG:ns NR:ns ## COG: SP0074 COG0110 # Protein_GI_number: 15900019 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 1 182 1 182 185 252 64.0 2e-67 MTSEKEKMLAGQLYDAGDAELTAMRLEARQKMKLFNNEDDRDRQREIIKSLFGSTGEKLT MNPRFVCDYGSNIYVGENFYANYNCTMLDVCEIHIGDNAMFGPNCQLLTPLHPLDAKERI SGLEYGAPITIGDNAWFGGGVTILPGVTLGDNVVVGAGAVVTKSFGDNVVLAGNPAKIIK TLD >gi|304426430|gb|AEEM01000014.1| GENE 9 7948 - 8727 796 259 aa, chain - ## HITS:1 COG:SPy1162 KEGG:ns NR:ns ## COG: SPy1162 COG0164 # Protein_GI_number: 15675138 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pyogenes M1 GAS # 3 259 4 260 263 334 68.0 8e-92 MATVKEIKEALAAIESLDDARWQDYESDGRAGVQKAIQQRKKAIQADIDEDLRLENMLRY EKELYQQGYQAIAGIDEVGRGPLAGPVVTACVILPKNCKIKHLNDSKKIPKNHHEEIYQE ILARALGIGIGIVDNNVIDQINIYEATKVGMLQAINQLKGVVTKPDYLLIDAMHLETSIP QQSLIKGDANSLSIAAASIVAKVTRDRMMADYANDYPGYAFEKNVGYGTKEHLEGLKKYG ITPIHRKTFEPIKSMLKES >gi|304426430|gb|AEEM01000014.1| GENE 10 8714 - 9568 836 284 aa, chain - ## HITS:1 COG:SPy1161 KEGG:ns NR:ns ## COG: SPy1161 COG1161 # Protein_GI_number: 15675137 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 280 1 280 282 478 85.0 1e-135 MANIQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNK ADLADSNRTKEWRNYFEKQGIKTLAVNSKEQATVKLVTDAARSLMADKLAKLRERGIQKE TLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPK FEDEVVGLKLALTGAIKDQLLPMDEVTIFGLNFFKKYYPERLVERFKGINLEEEAPEIIM AMTQKLGFRDDYDRFYSLFLKDVREGKLGRYTLDVVGEVENGDR >gi|304426430|gb|AEEM01000014.1| GENE 11 9812 - 10222 331 136 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1101 NR:ns ## KEGG: GALLO_1101 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 136 1 136 136 231 100.0 6e-60 MDDYTEMTIETYLAERLTKEIAAYEKKSHFHRAWFIVFKVIQIIVLALVPILASLPIPCF KLLAVIASCLVLVLEALLAVSNHKDKWRIYQATSKELASEKFTFETTSGIYNKEKSTEDR FALLVDRCENIIKNKE >gi|304426430|gb|AEEM01000014.1| GENE 12 10432 - 10749 344 105 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1102 NR:ns ## KEGG: GALLO_1102 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 105 1 105 105 209 100.0 2e-53 MKAFYKGKVATVWQISQDKSAQPDWVKDAFAKGYLHWLDNHLRILMAGLNPSTTENLKTG VVGSLGGGFAGYGMYELGYIGDYLDITNHRVISEKTFERNYQTID >gi|304426430|gb|AEEM01000014.1| GENE 13 10733 - 10921 209 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSTQTAIFLTLFFLILCLLNFQKELSTLKLILNSIGLIGFLILFFTAVKKERGSDNES FL >gi|304426430|gb|AEEM01000014.1| GENE 14 11205 - 12572 790 455 aa, chain - ## HITS:1 COG:SPy1082 KEGG:ns NR:ns ## COG: SPy1082 COG0642 # Protein_GI_number: 15675070 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 5 447 2 444 448 303 42.0 6e-82 MTKKLKIKTLRQRILQTVMEIIIGIILVAISIFIITDILAYTNQITSASNQLTITISDKA SKNDIIQEMKNIPYDYILYDKNSGKIINQTNVSNDFTNYQKAFETKQIVNASDGVTYIIV ENTNYSLIVRKPSIPEFANHTLRHISYNSLTYITFIVGIFLVLIWAITRLLKEFAKNFHH IQNLVLNMGNLALSAPLNSSDIAEFDTILTILSQKSDELAELIEKERNEKKDLSFQIAAL AHDVKTPLTVIKGNLELLEMTSLTENQLSFLTSINNSIIVFENYFNAMLTYSRLLSDENN DKETIHLEIFLTELSREIQDILKPTTIQFTLNNQAQCSYFLGNQLNLNRALVNIFVNAVQ HAPNGKIRLSVEESDNHLNFKIWNNGAPFSAKALKNADKFFFTENNGRSDKHYGIGLSFA KAVAEKHHGKLTLCNPEKGGAEVVLSISTNSPIRD >gi|304426430|gb|AEEM01000014.1| GENE 15 12565 - 13251 529 228 aa, chain - ## HITS:1 COG:SPy1081 KEGG:ns NR:ns ## COG: SPy1081 COG0745 # Protein_GI_number: 15675069 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 226 1 226 228 276 60.0 2e-74 MYKVLVIDDDFEILKLMKNILELQNFSVTTYQKIELPIRLADFTGYDLILLDVMMPDIDG MELCQTIRNHITTPIIFVSAKDTENDIIKGLNLGGDDYITKPFSIKQLVAKIEAHLKREE RSKQAQKAFQEFKREFSSITVYLQEKRICVNKNQVLLTNREYAILELLSSQPKKVFTREN IYEHVYNDDSDTLFRSISEYVYQIRQKFSVYGINPIKTVRGVGYQWHD >gi|304426430|gb|AEEM01000014.1| GENE 16 13301 - 13975 281 224 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1105 NR:ns ## KEGG: GALLO_1105 # Name: not_defined # Def: putative lantibiotic transport-associated permease protein # Organism: S.gallolyticus # Pathway: ABC transporters [PATH:sga02010] # 1 224 1 224 224 368 100.0 1e-100 MFKAFKSEVLKLKHSFTLYLISGVFVVELLTVPAYLAISRNVYATQAAIYFPVMGYCLLL SIVALQTFEQEEKANHWQNVNCTQKRLKLWISKLVTIDFLLFLPSVLLWQLIGVVVNQTV YANYVGFVTWLLLIFLNHFHHLLLTIFSSRNLTIIVAFVECLFILFASNGVFVNYFWIPI ALPVNAILAYGNSRATQIIWALIGWIVVCVILNVIILKIPKNHS >gi|304426430|gb|AEEM01000014.1| GENE 17 13968 - 14687 366 239 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1106 NR:ns ## KEGG: GALLO_1106 # Name: not_defined # Def: putative lantibiotic ABC transporter, membrane protein # Organism: S.gallolyticus # Pathway: ABC transporters [PATH:sga02010] # 1 239 1 239 239 350 100.0 3e-95 MNKVLQSEMLKRKKGIYGKLCFIIPLISIFIAFLLCGPSLLESFSIYWWEALFLFTLIGL FFTYDQKEEEGAGHFQNIILGQLTYRIQIAKIILTVKDLILASLFFLLILYLVSILFSGI MILDIIRDIEVLFFILVASLWNIPMLYYLSTWVNNYVLLVLNALACLLLAPFLAQTSFWY LFPYTYHYKISQVLIHLKPSGDLENLNVSHPFSVLFIASFLSIILFGLFIKLLREEKRV >gi|304426430|gb|AEEM01000014.1| GENE 18 14690 - 15379 279 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 206 2 217 245 112 29 5e-24 MRVKVTNLQKSYKDRDILKDISFTIKSGTICGLLGVNGAGKSTIMKILFGLEKPSSGNIL FDEKTPQEIKKSDEKLGALIESPAIYMNLSAFENLKTRALLYDIPDSKIKETLALIGLAD TGRKKAGKFSLGMKQRLGIGMAIITNPEFLILDEPTNGLDPDGIQELLELITSLKRQGMT ILISSHQLHEISQVADDIMILHNGEIRYNQPNHHQDLGNLFFTIVHGGH >gi|304426430|gb|AEEM01000014.1| GENE 19 15479 - 17017 1680 512 aa, chain - ## HITS:1 COG:SP0770 KEGG:ns NR:ns ## COG: SP0770 COG0488 # Protein_GI_number: 15900664 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 511 1 512 513 918 88.0 0 MSILEVKHLSHGFGERTIFEDVSFRLLKGEHIGLVGANGEGKSTFMSIVTGHLQPDEGKV EWSKYVTAGYLDQHTVLEAGMSVRDVLRTAFDELFKTEARINEIYMSMADDGADMDALME EVGELQDRLESRDFYTLDAKIDEVARALGVMDFGMDSDVTELSGGQRTKVLLAKLLLEKP DILLLDEPTNYLDAEHIEWLKRYLQNYENAFVLISHDIPFLNDVINIVYHVENHDLVRYT GDYDNFQAVYAMKKAQLEAAYERQQKEIADLQDFVNRNKARVATRNMAMSRQKKLDKMER IELQSEKPKPSFEFKESRTPSRFIFQTQDLEIGYDHPLTKPLNLTFERNQKVAIIGANGI GKTTLLKSLLGIIPPISGSVERGDYIELGYFEQEVVAGNRQTPLEAVWDAFPALNQAEVR AALARCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKEELKR ALKAYKGSILMVCHEPDFYEGWTEVWDFNELM >gi|304426430|gb|AEEM01000014.1| GENE 20 17187 - 17741 476 184 aa, chain - ## HITS:1 COG:SPy1208 KEGG:ns NR:ns ## COG: SPy1208 COG4720 # Protein_GI_number: 15675172 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 10 172 10 172 185 169 57.0 4e-42 MKHLTTRQLVELSLYAALIFISVQFLRIPLGAQFVHFGNALVVVAVLLYGSRLGALVAAI GLGLFDVLNGYAAEVWITILESLIVCLVLHFVFEKLMHSDDKTRNVIIVGIVAAITKIIS NLAKYTIINSIVGGLQFQVAFLAALVKIGGTFGSALVTIISVPILYPILKQIFLHHTQPK TISE >gi|304426430|gb|AEEM01000014.1| GENE 21 17738 - 18598 590 286 aa, chain - ## HITS:1 COG:SPy1209 KEGG:ns NR:ns ## COG: SPy1209 COG2240 # Protein_GI_number: 15675173 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Streptococcus pyogenes M1 GAS # 6 285 2 281 288 248 41.0 9e-66 MKNPTKSVIVANDIVGLGKVALSTALPVLSACQIEVIPLPTVLLSSHTGGFENISIIELN QATTGFLTQWNTINFSVDGLMTGYFNSQKQLHQIAEFAKQRKLVRFVDPIMADNGRLYAG YQQDFVTVMQQFCQNADVITPNITEACLLADVPYLGEDYTRKDIEELLLRLEKFHNKHVI LTGVSFEAGQIGLAHFNQQSGSVTYHMSKAYPHHFFGTGDLLCAVLGAGYFHGLSLDKTA EVALDFIDKTLQLTLELKRDLKLGLCYEPYLLDLAIQMKHLKEEKE >gi|304426430|gb|AEEM01000014.1| GENE 22 18724 - 19986 877 420 aa, chain + ## HITS:1 COG:SPy1210 KEGG:ns NR:ns ## COG: SPy1210 COG1167 # Protein_GI_number: 15675174 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Streptococcus pyogenes M1 GAS # 1 420 1 415 422 392 53.0 1e-109 MTSKYQEIMTAIVEQIESGILKKGDKIPSIRVLSQTYHCSKDTVQRALLELKFKNYIYAV NKSGYYVLEGKSQKEEPLNLSLTEYNNMAYKDFTTCLTETLVNRENYLFNYYYQQQGLQE LILSLKNYLEKGAIYAKENDILVTSGTQQALYILSQVSFPNKKTTILLEQPTYHRMIDLV ASQNLPYQTIERDFNGIDLTALERLFKTQDIKFFYTISRFSNPLGLSYTAVEKQKIVELA QKYDVYIIEDDYMGDFTKSTDLPLHYYDTSGHVIYLKSFSMTIFPALRLGTIVLPQPLMQ AFLEHKKMIDYDTNLIMQKALSLYLDSGMFEKNLNYLSQVFHEQVAKTTVLLSQFPNIQH YSASLQHLLIELPQDRHLGELKFTNKINYLENSYLTTPQKRFIQIPNDNHLSETLNIIAK >gi|304426430|gb|AEEM01000014.1| GENE 23 20067 - 21002 1160 311 aa, chain - ## HITS:1 COG:SP1014 KEGG:ns NR:ns ## COG: SP1014 COG0329 # Protein_GI_number: 15900886 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 311 1 311 311 544 87.0 1e-154 MAIEDLRNVKIITAMITPFNADGSINFDALPKLVEHLLAHHTDGILLAGTTAESPTLTHD EELELFAAVQKIVNGRVPLIAGVGTNDTRDSIEFAREVAAFGGFAAGLAIVPYYNKPSQE GMYQHFKAIADASELPIIIYNIPGRVVVEMTPETMLRLAEHPNIIGVKECTSLANMAYLI EHKPDDFLIYTGEDGDAFHAMNLGADGVISVASHVNGDEMHEMLTAIENSDIKKAAAIQR QFIPKVNALFSYPSPAPVKAVLNYLGFETGPLRLPLVSCPPEDAKRIIDVVIDGDVEATK ETVTGVLRPDY >gi|304426430|gb|AEEM01000014.1| GENE 24 21105 - 22181 1526 358 aa, chain - ## HITS:1 COG:SP1013 KEGG:ns NR:ns ## COG: SP1013 COG0136 # Protein_GI_number: 15900885 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 358 1 358 358 605 84.0 1e-173 MGYTVAVVGATGAVGTRMIQQLEQSTLPIDKVRLLSSSRSAGKVLKYKGQDVTVELTTED SFEGVDIALFSAGGSVSAKFAPYAVKAGAVVVDNTSYFRQNPDVPLVVPEVNAHALDAHN GIIACPNCSTIQMMVALEPVRQKWGLSRIIVSTYQAVSGAGQSAINETIREIKEVVNDGA EPKDVHADILPCGGDKKHFPIAFNALAQIDVFTDNDYTYEEMKMTNETKKIMEEPDLPVS ATCVRVPVLFSHSESVYIETKEVAPIEEVKAAIAAFPGAVLEDDVANQVYPQAANAVGKR ETFVGRIRKDLDVENGIHMWVVSDNLLKGAAWNSVQIAETLHERGLVHPTKELKFELK >gi|304426430|gb|AEEM01000014.1| GENE 25 22354 - 22482 71 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVTKRFTQIVKVRSCVSSRTRMTSSAQINSQIELIRLIACN >gi|304426430|gb|AEEM01000014.1| GENE 26 22519 - 24102 1389 527 aa, chain - ## HITS:1 COG:SPy1212 KEGG:ns NR:ns ## COG: SPy1212 COG1502 # Protein_GI_number: 15675176 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 527 1 525 525 765 71.0 0 MIIENKNKDKAMRLLDKSRRSFLRGIFSRTTVISVLLILQLFFLIASFAWLDQYRIWMEI IERALAITAVLYLVNSEMDALSRVTWLILVMIAPLLGSLFLIYTKLDWGYRGLKQRMNEL VDSSAKYLPDNQEILKVLKGNTSTTYHLVQYFDRSRGNFPAYQNTEVTYFPIGEAFFEEL KKQLLKAEKYIFMEFFIIAEGVMWGEILSILEQKVKEGVEVRVLYDGMIEFSTLSFDYTQ RLKKLGIQAKAFSPISPFISTYYNYRDHRKIIVIDGKVGFTGGVNLADEYINKLERFGHW KDTAIMLEGEAVNSFVVLFLQMWSVTEKELVIEPYLVEHDKSRRANGYVIPYGDSPLDTD KVGENVYIDILNHARDYVYIMTPYLILDSEMEHAICFAAERGVDVRIIMPGIPDKPIPYA LAKTYFSKLMRSGVKIYLYKPGFVHAKVFISDDSKAVVGTINLDYRSLYHHFECATYMYK VDAIQDIYRDCMQTLKDCKRVTPEMVNNRPAHEKIIGLLVKTIAPLM >gi|304426430|gb|AEEM01000014.1| GENE 27 24222 - 25892 2188 556 aa, chain - ## HITS:1 COG:SPy1213 KEGG:ns NR:ns ## COG: SPy1213 COG2759 # Protein_GI_number: 15675177 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 556 1 556 556 921 84.0 0 MKSDIEIAQSVELKPITEVVEKVGITFDDIELYGKYKAKLSFDKIKSVQENKPGKLVLVT AINPTPAGEGKSTMSIGLADALNKIGKKTMLALREPSLGPVMGIKGGAAGGGYAQVLPME DINLHFTGDMHAITTANNALSAIIDNHLHQGNELGIDQRRIIWKRVVDLNDRALRHVTIG LGSPVNGIPREDGFDITVASEIMAILCLATDINDLKERLANIVVAYRYDRTPVYVRDLKV EGALTLILKDAIKPNLVQTIYGTPAFVHGGPFANIAHGCNSVLATATALRLADYTITEAG FGADLGAEKFLDIKTPNLPTTPDAVVIVATIRALKMHGGVAKTDLGEENVEAVRTGFANL KRHVENVRKFGVPAVVAINEFVADTEAEIAALKELCAEIDVPVELASVWANGADGGIDLA NAVVNAVENGNADYKRLYSDEDSLEEKVTKIVTEIYGGDKVIFGKKAKTQLKQFAQFGWD KLPVCMAKTQYSFSDNQALLGAPEGFDITIREFVPKTGAGFIVALTGDVMTMPGLPKKPA ALNMDVAEDGTAIGLF >gi|304426430|gb|AEEM01000014.1| GENE 28 26026 - 27033 809 335 aa, chain - ## HITS:1 COG:FN1094 KEGG:ns NR:ns ## COG: FN1094 COG0463 # Protein_GI_number: 19704429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 334 4 357 360 210 37.0 4e-54 MYIIIPAYEPDQRLVQVVQDIKEELQADIIVVNDGSDAFYDTFYHQVEQLGATVLIHPNN LGKGAALKTAFTHIQNVSVNSDIMITVDSDGQHLIKDIVKVARATQHHPESIVLGARAFV GKVPARSRFGNKVTAQLFRLVTGVAITDTQTGLRGLSTELIPWLLSLKGERFEYEFNMLL EADRSGHDIHEVPIETVYIEGNESSHFRPIQDSIRIYSPFLKFSGASILAAIVDALALFT LVALTKNLLISVILARLISATTQCLLNANLVFNRSNPLLISIVRYFLLVAVILTCNYFML KVLISIGLGLILSKLLTETILFILSYRVQRKFVFN >gi|304426430|gb|AEEM01000014.1| GENE 29 27074 - 28306 1618 410 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1117 NR:ns ## KEGG: GALLO_1117 # Name: not_defined # Def: conserved hypothetical secreted lipoprotein # Organism: S.gallolyticus # Pathway: not_defined # 1 399 1 399 410 482 100.0 1e-134 MKTKQTLLYSVCALTLLSLGACSQTSSTSSTSSSSSTVASTTSASTSTDANTDYFTETDL TSTYDESSASTIKLSDSSAKVSGDGVSVDGSTVTISEAGTYIVSGESDGVQIKVTAADSD KVQIVLNGVTMTGSDALIAVTSADKVVITSADGTTNTLTDSEHTTDDYSAAIYSKSDLTF NGSGTLTVEGNYNNAIKGSDDVKFTGGTYNITSTVKHAISANDAIDIYNSTLNLTSTEDA IHSDNDEDTSLGNIYIQSGNITINAGDDGIHASNDFVIDGGTIDIQSCVEGLEGKTITIN DGTISINASDDGINATDWAFTGDEMEAQDGVLITINGGDITINMADGDTDGIDSNGDLVV NGGTINITGQSAFDFSGNATYNGGTLIVNGETETEITESGPGAGGGPGGF >gi|304426430|gb|AEEM01000014.1| GENE 30 28340 - 28732 214 130 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1118 NR:ns ## KEGG: GALLO_1118 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 130 1 130 130 229 100.0 3e-59 MFTSVTKRTFGRATLVYLGLTIFCIVFTIIYEKFSYGESSIFMRLMFLAPLAGAVVSFLS GLNLTWITKRGPFLLFNSSLAIIASACLVRGIIEVSGRTSSYDQPYWWAALAFSGLSLVI GLLSRDKKQH >gi|304426430|gb|AEEM01000014.1| GENE 31 28713 - 29621 1105 302 aa, chain - ## HITS:1 COG:BS_yomE KEGG:ns NR:ns ## COG: BS_yomE COG4632 # Protein_GI_number: 16079198 # Func_class: G Carbohydrate transport and metabolism # Function: Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase # Organism: Bacillus subtilis # 31 302 15 307 644 95 29.0 1e-19 MRFLKKHAYTLLFSTALLSANVYVLLKTFVIPSAVTKVAAETSSTTASTETGEVTTTDTS YQDDNISITITTGNTSNTTYYVADITLSSADYLKTALAQDTFGTNITETTSSIASSKNAI FAINGDYYGANTSGYVIKNGVIYRSTNRQSDYDDLAIYSDGSFGTFNESDTTAQELLDSG VVNTFAFGPTLVSNGQIAVSESEEVGQAMAENPRTAIGIIETDDGSLHYIVIVSDGRTDE SAGLTLYEMAELMQSYGVTTAYNLDGGGSSTMYFNGKVINNPTTSGNTIEERAVSDIVYI GY >gi|304426430|gb|AEEM01000014.1| GENE 32 29767 - 30453 809 228 aa, chain + ## HITS:1 COG:SPy1221 KEGG:ns NR:ns ## COG: SPy1221 COG0452 # Protein_GI_number: 15675185 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 228 1 228 228 249 60.0 2e-66 MKILITSGGTTEKIDSVRGITNHATGSLGKYIAEIFLENGHEVTLVTTKGAVKPQKQPHL TTYIVSNVDSLVETLEPLVKTHDVFIHSMAVSDYTPVYMTDLDEVENAEHISDLLTQQNT ESKISSKADYQVLFLKKTPKVISLVKTWNPDIMLIGFKLLVNVSKDELFAVARASLKKNK AHYIVANDLNEINGTQHHAYLLSENDVTEAETKTELAKLIFERVTNHD >gi|304426430|gb|AEEM01000014.1| GENE 33 30446 - 30991 646 181 aa, chain + ## HITS:1 COG:SPy1222 KEGG:ns NR:ns ## COG: SPy1222 COG0452 # Protein_GI_number: 15675186 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 179 1 178 181 234 72.0 5e-62 MTKTIVLAVSGSISAYKAADLSNQLTKLGYQVHVLMTEAATQFITPLTLQVLSKNPVHLD IMKEDDPKVVNHIELAKQADLFVVAPASANTIAKLAHGIADNIVTATALALPTDTPKLIA PAMNTKMYDNLLTQRNLQILQEVGYQEIEPRSSMLACGDVGRGALAELDAIIQKIQDTIE N >gi|304426430|gb|AEEM01000014.1| GENE 34 31103 - 31675 473 190 aa, chain + ## HITS:1 COG:SP1232 KEGG:ns NR:ns ## COG: SP1232 COG4684 # Protein_GI_number: 15901094 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 189 2 186 187 209 71.0 2e-54 MKKNKAATDVAIIAIFFAIMLVINFLTSLVFNLWPVPIKPTLVHVPVIIASIVYGPRIGA ILGGLMGIMSVTVNTLTLLPTSYLFSPFVENGNFASLIIALVPRILIGITPYFVYKWLHN RTGLVIAGAIGSMTNTIFVLGGIFLLFSNVYNGNIQALLAVVFGTNAIAEMIISAILTLA LVPSLQKIKN >gi|304426430|gb|AEEM01000014.1| GENE 35 31918 - 33633 2339 571 aa, chain + ## HITS:1 COG:SPy1224 KEGG:ns NR:ns ## COG: SPy1224 COG1109 # Protein_GI_number: 15675188 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 570 1 571 572 971 87.0 0 MTYTENYQKWLDFAELPDYLREELVAMDEKTKEDAFYTNLEFGTAGMRGIIGAGTNRINI YVVRQATEGLAKLIETKGEDVKKRGVAIAYDSRHFSPEFAFESAQVLAKHGIKAYVFESL RPTPELSFAVRHLGTFAGIMVTASHNPAPFNGYKVYGEDGGQMPPADADALTDFIRAIED PFAIELADLEESKASGLIEVIGEAVDAEYLKEVKNVNINQKLIDEYGKDMKIVYTPLHGT GEMLARRALAQAGFDSVQVVEAQAVPDPDFSTVKSPNPENQEAFALAEELGRKVDADVLV ATDPDADRLGVEIRQADGSYRNLSGNQIGAIIAKYILEAHKTAGTLPENAALAKSIVSTE LVTKIAESYGATMFNVLTGFKFIAEKIQEFEEKHNHTYMFGFEESFGYLIKPFVRDKDAV QAVLIVAEIAAYYRSRGLTLADGIEEIYKEYGYFAEKTISVTLSGVDGAAEIKKIMDKFR DNAPAQFNTTDIAKTEDFLAQTATSANGVEKLTTPPSNVLKYTLADDSWIAVRPSGTEPK IKFYIATVGTDLADAEAKIANIEKEINDFVK >gi|304426430|gb|AEEM01000014.1| GENE 36 33819 - 35078 1329 419 aa, chain - ## HITS:1 COG:SP0159 KEGG:ns NR:ns ## COG: SP0159 COG1914 # Protein_GI_number: 15900097 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Streptococcus pneumoniae TIGR4 # 8 417 9 417 420 504 68.0 1e-143 MTENIEQQSNWRTKLKALGPGILMASAAVGGSHIVSSTQAGAIYGWQLALVILLINIFKY PFFRFGSQYTMENDKSLIEGYAEKGKGWLAIFFVLNIFSAIVNTAGVGILCAAILYNIFP NGFGLSISQLTTIIIVIIWAMLLIGGYKFLDSLAKWVMTALTIATVVAVVIALFKHREYA PDFEAPTPWRMAALPFIVSLMGWMPCPIEISAINSMWSVEKRKQVKMSEADAIFDFNTGY IGTAILALIFCALGALIQFGSGEEVQSASAAYIAQFVNMYASVLGEWSRFLITLIAFLCI FGTVITVIDGYSRANNEALRLLLDKKEASQKALYGWMTLTAVIGLVIVYLFAGNVATMLR FAMIASFITTPFFAYLNYSLVNNKEHQVKPWLKRLSIIGLVYLFGFALFFIIAWLTGNV >gi|304426430|gb|AEEM01000014.1| GENE 37 35253 - 36221 1118 322 aa, chain - ## HITS:1 COG:SP1027 KEGG:ns NR:ns ## COG: SP1027 COG4086 # Protein_GI_number: 15900898 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Streptococcus pneumoniae TIGR4 # 4 320 3 322 324 329 62.0 5e-90 MKFKKTLMACALAVLSIVTVNSVQASSNSVQDVIDETYVQPDYVLGYSLSDDQRTQTLAL LGYDSSTDTSVKTITTSAYANIMNVADDSSLQLYSSAKIQKLGSSETLTVNIVTPENITK VTEDMYRNAAVTLGIEHAAITVASPIAVTGESALAGIYYSLEENGADVSDESKELAQEEL EALSTINSENQGTDGYDADKLNVALTDIKSAVADAGDGVSKEDVRKIVEETLDNYELKDV LSSDQITLIVNFAFNLSKSSIIDSSSFKSTLASLKDSIVSNASSTFKGINLNFDATDALE SSKGFLANIWQAIVNFFKNLFN >gi|304426430|gb|AEEM01000014.1| GENE 38 36309 - 36722 638 137 aa, chain - ## HITS:1 COG:SPy1155 KEGG:ns NR:ns ## COG: SPy1155 COG0346 # Protein_GI_number: 15675131 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Streptococcus pyogenes M1 GAS # 1 137 1 137 137 213 74.0 9e-56 MKLNAVHHVALIVSDYEKSRDFYVNKLGFEIIRENHRPERHDYKLDLKCGTIELEIFGNK LSDPDYVAPPKRVGQPEYHMEACGLRHLAFYVNDVDAYKAELESMGIYVQPVRYDDYTGE KMTFFFDPDGLPLELHE >gi|304426430|gb|AEEM01000014.1| GENE 39 36780 - 37526 611 248 aa, chain - ## HITS:1 COG:SPy1154 KEGG:ns NR:ns ## COG: SPy1154 COG3764 # Protein_GI_number: 15675130 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 1 247 1 248 249 282 60.0 5e-76 MVKKEKKTHRFWNTLRLFLCLLLLIVGIALIFHKSICNFLIGQESNHYQITKVSKKKIKE NESADVTYDFSSVEPVSIQSVLKAQANSANLPVIGGIAVPDVGINLPIFKGLGNTELSYG AGTMKENQVMGGENNYALASHHVFGLVGSSKMLFSPLENAKVEMKIYLTDKSTIYTYVIT EIESVTPDRSDVINDTPGQSQVTLVTCMDQDATERIVVKGNLESSVAYNEASDDILEAFE YSYNQMTF >gi|304426430|gb|AEEM01000014.1| GENE 40 37528 - 39984 2989 818 aa, chain - ## HITS:1 COG:SPy1152 KEGG:ns NR:ns ## COG: SPy1152 COG0188 # Protein_GI_number: 15675129 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pyogenes M1 GAS # 1 808 1 808 828 1334 86.0 0 MQDKNLIDVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHMLVDGHGNFGSMDGDGAAAQRY TEARMSKIALEMLRDINKNTVDFQDNYDGSEREPLVLPSRFPNLLVNGATGIAVGMATNI PPHNLGESIDAVKLVMDNPDVTTRELMEVLPGPDFPTGALVMGKSGIRKAYETGKGSIVL RSRTEIETTKSGRERIVVTEFPYGVNKTKVHEHIVRLAQEKRIEGITAVRDESSREGIRF IIEVRRDASANVILNNLFKLTSLQTNFSFNMLAIENGVPKILSLKQIIVDYIEHQKEVIV RRTEFDKAKAEKRAHILEGLLVALDHLDEVISIIRNSETDVIAQGELMSRFDLSERQSQA ILDMRLRRLTGLEREKIQAEYDDLLALIADLADILAKPERVVAIIKEEMDDIKRKYADPR RTELMVGEVLSLEDEDLIEEEDVLITLSNKGYIKRLAQDEFRAQKRGGRGVQGTGVNDDD FVRELVSTSTHDHVYFMTNKGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDEGEIVQTIIS QSGHDDNESYLFFVTRQGVVKRTKESEFSNIRQNGLKALNLKDGDELINVIRTNGNDDII IGTKTGYSVRFNESAVRSMSRSATGVRGVNLREGDEVVGASRISDDQEVLVITEKGYGKR TLASEYPTKGRGGKGIKTANITEKNGQLAGLATVNGDEDIMVITDTGVIIRTNVASISQT GRATLGVKIMRLDQDAKIMTFALVEPEEEEEKTGEDLE >gi|304426430|gb|AEEM01000014.1| GENE 41 40192 - 41181 1503 329 aa, chain + ## HITS:1 COG:SP1220 KEGG:ns NR:ns ## COG: SP1220 COG0039 # Protein_GI_number: 15901082 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 329 1 328 328 568 89.0 1e-162 MTATKQHKKVILVGDGAVGSSYAFALVNQGIAQELGIIEIPQLFDKAVGDAEDLSHALAF TSPKKIYAAKYEDCADADLVVITAGAPQKPGETRLDLVGKNLAINKSIVTEVVKSGFNGI FLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALAEKLDVDARSVHAYIMGE HGDSEFAVWSHANVAGVNLENYLKDVQNVNEAELVELFEGVRDAAYSIINKKGATFYGIA VALARITKAILDDENAVLPLSVFQEGQYPGVTDCYIGQPAIVGAHGIVRPVNIPLNDAEQ QKMEASAKELKAIIDEAFSKEEFASAAKN >gi|304426430|gb|AEEM01000014.1| GENE 42 41241 - 42608 1652 455 aa, chain - ## HITS:1 COG:SPy1150 KEGG:ns NR:ns ## COG: SPy1150 COG0446 # Protein_GI_number: 15675127 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 455 1 455 456 735 80.0 0 MSKIVVIGANHAGTACIKTMLTNYGTENEVVVFDQNSNISFLGCGMALWIGEQIAGPEGL FYSDKDELEQLGAKVYMNSPVESIDYDKKEITALVDGQKHFETYDKLIFATGSQPIIPPI KGVSMKEDSLEFESKLENVQFVKLYQNAEDVIERLKEKAISRVAVVGAGYIGVELAEAFQ RKGKEVTLIDVAETCLAGYYDRDLSDAMANNLQEHGIHLAFGEAVQEIVGKTKVEKIITD KSEYDVDMVILAVGFRPNTALAQDKIKLFPNGAFLVDKYQETSMPDVYAIGDCATIYNNA TQSTDYIALASNAVRTGIVAAHNACGHKLEGAGVQGSNGISIYGLNMVSTGLTLEKAKAK GFDALEVEYVDNQKPEFIQKDNFQVTLKIVYDKTSRVILGAQIMAKKDISMGIHLFSLAI QEQVTIDKLALTDLFFLPHFNKPYNYITMAALNAK Prediction of potential genes in microbial genomes Time: Sun May 29 12:41:04 2011 Seq name: gi|304426198|gb|AEEM01000015.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00025, whole genome shotgun sequence Length of sequence - 224305 bp Number of predicted genes - 231, with homology - 227 Number of transcription units - 101, operones - 58 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 26/0.000 - CDS 21 - 977 1249 ## COG1079 Uncharacterized ABC-type transport system, permease component 2 1 Op 2 24/0.000 - CDS 979 - 2031 1342 ## COG4603 ABC-type uncharacterized transport system, permease component 3 1 Op 3 15/0.000 - CDS 2024 - 3562 176 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Prom 3585 - 3644 2.9 - Term 3674 - 3704 1.0 4 1 Op 4 . - CDS 3726 - 4790 1721 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein - Prom 4828 - 4887 3.2 - Term 4827 - 4865 3.2 5 2 Tu 1 . - CDS 4979 - 5641 757 ## COG0274 Deoxyribose-phosphate aldolase - Prom 5688 - 5747 8.2 - Term 6059 - 6125 14.8 6 3 Tu 1 . - CDS 6131 - 6724 614 ## COG2813 16S RNA G1207 methylase RsmC - Prom 6749 - 6808 7.4 + Prom 6754 - 6813 10.6 7 4 Op 1 2/0.118 + CDS 6838 - 7758 625 ## COG1072 Panthothenate kinase 8 4 Op 2 . + CDS 7833 - 8084 371 ## PROTEIN SUPPORTED gi|56807502|ref|ZP_00365438.1| COG0268: Ribosomal protein S20 + Term 8093 - 8126 2.4 - Term 8174 - 8210 3.2 9 5 Op 1 40/0.000 - CDS 8220 - 9560 1464 ## COG0642 Signal transduction histidine kinase 10 5 Op 2 2/0.118 - CDS 9550 - 10224 740 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 10351 - 10410 7.2 - Term 10380 - 10413 3.1 11 6 Tu 1 . - CDS 10422 - 12965 2761 ## COG0308 Aminopeptidase N - Prom 13101 - 13160 9.8 - Term 13136 - 13182 8.9 12 7 Op 1 32/0.000 - CDS 13188 - 13841 902 ## COG0704 Phosphate uptake regulator 13 7 Op 2 7/0.000 - CDS 13872 - 14630 292 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 14 7 Op 3 41/0.000 - CDS 14642 - 15445 278 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 15 7 Op 4 38/0.000 - CDS 15456 - 16343 1186 ## COG0581 ABC-type phosphate transport system, permease component 16 7 Op 5 39/0.000 - CDS 16333 - 17250 838 ## COG0573 ABC-type phosphate transport system, permease component 17 7 Op 6 1/0.353 - CDS 17260 - 18126 1045 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 18154 - 18213 7.6 18 8 Tu 1 . - CDS 18269 - 19579 891 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Prom 19601 - 19660 6.0 - Term 19627 - 19668 2.3 19 9 Tu 1 . - CDS 19722 - 20687 880 ## GALLO_1151 hypothetical protein - Prom 20729 - 20788 7.4 - Term 20824 - 20863 5.2 20 10 Op 1 . - CDS 20899 - 22254 429 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 21 10 Op 2 . - CDS 22267 - 22599 410 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 22620 - 22679 4.1 - Term 22661 - 22708 5.6 22 11 Tu 1 . - CDS 22716 - 23039 391 ## PROTEIN SUPPORTED gi|184155113|ref|YP_001843453.1| hypothetical protein LAF_0637 - Prom 23060 - 23119 6.5 - Term 23106 - 23142 6.7 23 12 Tu 1 . - CDS 23176 - 24000 1056 ## COG0428 Predicted divalent heavy-metal cations transporter - Prom 24020 - 24079 6.0 - Term 24077 - 24110 3.1 24 13 Op 1 . - CDS 24114 - 24671 399 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 25 13 Op 2 2/0.118 - CDS 24689 - 25447 788 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 26 13 Op 3 3/0.059 - CDS 25437 - 25712 297 ## COG4476 Uncharacterized protein conserved in bacteria - Prom 25791 - 25850 3.4 - Term 25752 - 25794 3.1 27 14 Op 1 1/0.353 - CDS 25855 - 26259 393 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 28 14 Op 2 12/0.000 - CDS 26302 - 27243 450 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 29 14 Op 3 . - CDS 27250 - 28128 890 ## COG0130 Pseudouridine synthase - Term 28154 - 28193 1.0 30 15 Op 1 . - CDS 28214 - 29569 1218 ## COG2461 Uncharacterized conserved protein 31 15 Op 2 . - CDS 29562 - 29801 292 ## GALLO_1163 hypothetical protein - Prom 29822 - 29881 7.6 32 16 Op 1 . - CDS 29883 - 30314 501 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 33 16 Op 2 . - CDS 30366 - 31706 1313 ## COG4487 Uncharacterized protein conserved in bacteria - Prom 31726 - 31785 6.9 34 17 Tu 1 . - CDS 31787 - 32383 653 ## COG0732 Restriction endonuclease S subunits - Prom 32403 - 32462 4.4 - Term 32470 - 32529 4.4 35 18 Op 1 34/0.000 - CDS 32563 - 33954 213 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 36 18 Op 2 . - CDS 33954 - 34643 533 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 37 18 Op 3 . - CDS 34643 - 35227 469 ## GALLO_1169 putative ABC transporter, permease protein - Term 35237 - 35268 -0.6 38 18 Op 4 8/0.000 - CDS 35312 - 36976 1356 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 39 18 Op 5 . - CDS 36969 - 38744 1522 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components - Prom 38866 - 38925 9.3 - Term 38920 - 38946 -1.0 40 19 Op 1 36/0.000 - CDS 38954 - 41596 2919 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 41 19 Op 2 . - CDS 41607 - 42308 368 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 42430 - 42489 7.7 + Prom 42321 - 42380 6.0 42 20 Tu 1 . + CDS 42449 - 42997 541 ## COG1309 Transcriptional regulator 43 21 Tu 1 . - CDS 43330 - 43821 554 ## COG2077 Peroxiredoxin - Prom 43842 - 43901 3.9 44 22 Tu 1 . - CDS 44046 - 44801 691 ## COG1878 Predicted metal-dependent hydrolase - Prom 44835 - 44894 7.8 - Term 44928 - 44963 4.0 45 23 Tu 1 . - CDS 44998 - 46278 1541 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 46309 - 46368 7.4 - Term 46351 - 46386 -0.5 46 24 Op 1 6/0.000 - CDS 46390 - 47022 612 ## COG0352 Thiamine monophosphate synthase 47 24 Op 2 12/0.000 - CDS 47015 - 47812 585 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 48 24 Op 3 1/0.353 - CDS 47813 - 48610 864 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 49 24 Op 4 . - CDS 48603 - 49289 645 ## COG0819 Putative transcription activator 50 24 Op 5 . - CDS 49276 - 49929 366 ## GALLO_1182 putative HAD-superfamily hydrolase / phosphatase 51 24 Op 6 . - CDS 49933 - 50649 782 ## COG0500 SAM-dependent methyltransferases 52 24 Op 7 . - CDS 50649 - 51227 649 ## COG4732 Predicted membrane protein + Prom 51559 - 51618 7.8 53 25 Tu 1 . + CDS 51646 - 52509 882 ## COG1396 Predicted transcriptional regulators + Term 52752 - 52792 8.5 + Prom 52735 - 52794 8.2 54 26 Tu 1 . + CDS 52925 - 54160 935 ## PROTEIN SUPPORTED gi|148990506|ref|ZP_01821647.1| ribosomal protein L11 methyltransferase + Term 54170 - 54220 4.2 - Term 54164 - 54201 4.7 55 27 Tu 1 . - CDS 54219 - 56534 2607 ## COG0210 Superfamily I DNA and RNA helicases - Prom 56597 - 56656 1.8 56 28 Op 1 16/0.000 - CDS 56673 - 57245 453 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 57 28 Op 2 . - CDS 57257 - 58069 1164 ## COG0214 Pyridoxine biosynthesis enzyme - Prom 58160 - 58219 6.8 + Prom 58122 - 58181 5.2 58 29 Tu 1 . + CDS 58237 - 59637 980 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 59838 - 59880 -0.4 + Prom 60059 - 60118 4.7 59 30 Tu 1 . + CDS 60138 - 61466 1324 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 61470 - 61520 6.0 - Term 61456 - 61506 6.0 60 31 Op 1 . - CDS 61512 - 61880 487 ## GALLO_1192 hypothetical protein 61 31 Op 2 . - CDS 61910 - 62179 374 ## GALLO_1193 hypothetical protein - Prom 62238 - 62297 4.4 - Term 62259 - 62293 -0.4 62 32 Op 1 . - CDS 62327 - 62806 513 ## COG1959 Predicted transcriptional regulator 63 32 Op 2 . - CDS 62806 - 63393 558 ## GALLO_1195 hypothetical protein - Prom 63416 - 63475 7.9 - Term 63448 - 63498 4.8 64 33 Op 1 4/0.059 - CDS 63512 - 63898 324 ## COG0561 Predicted hydrolases of the HAD superfamily 65 33 Op 2 . - CDS 63961 - 64332 419 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 64365 - 64424 5.7 - Term 64387 - 64444 12.2 66 34 Tu 1 . - CDS 64445 - 67231 2973 ## COG5263 FOG: Glucan-binding domain (YG repeat) - Prom 67285 - 67344 5.3 - Term 67317 - 67348 2.5 67 35 Op 1 . - CDS 67354 - 67926 624 ## COG1309 Transcriptional regulator - Prom 67946 - 68005 2.2 68 35 Op 2 . - CDS 68007 - 68447 376 ## GALLO_1199 hypothetical protein 69 35 Op 3 . - CDS 68478 - 69959 1463 ## COG0477 Permeases of the major facilitator superfamily - Term 70047 - 70078 2.5 70 36 Tu 1 . - CDS 70108 - 71613 1739 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 71642 - 71701 6.6 71 37 Op 1 1/0.353 - CDS 71705 - 72361 525 ## COG2755 Lysophospholipase L1 and related esterases 72 37 Op 2 4/0.059 - CDS 72358 - 73185 682 ## COG0561 Predicted hydrolases of the HAD superfamily 73 37 Op 3 . - CDS 73182 - 74000 634 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 74068 - 74127 5.8 - Term 74076 - 74125 7.5 74 38 Op 1 . - CDS 74137 - 74691 545 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 75 38 Op 2 . - CDS 74688 - 75452 730 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain - Prom 75546 - 75605 5.6 + Prom 75464 - 75523 6.1 76 39 Tu 1 . + CDS 75638 - 76477 1000 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 76487 - 76525 6.5 - Term 76464 - 76519 6.2 77 40 Tu 1 1/0.353 - CDS 76523 - 77614 719 ## COG3589 Uncharacterized conserved protein - Prom 77634 - 77693 5.2 - Term 77628 - 77666 4.3 78 41 Op 1 . - CDS 77704 - 79029 1801 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 79 41 Op 2 . - CDS 79070 - 79582 487 ## GALLO_1210 hypothetical protein 80 41 Op 3 2/0.118 - CDS 79600 - 79914 458 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 81 41 Op 4 3/0.059 - CDS 79922 - 81910 1869 ## COG3711 Transcriptional antiterminator 82 41 Op 5 . - CDS 81959 - 82276 392 ## COG1440 Phosphotransferase system cellobiose-specific component IIB - Prom 82305 - 82364 8.7 - Term 82435 - 82474 5.3 83 42 Op 1 . - CDS 82530 - 82859 331 ## GALLO_1214 hypothetical protein 84 42 Op 2 . - CDS 82875 - 83201 319 ## GALLO_1215 hypothetical protein - Prom 83244 - 83303 6.7 - Term 83322 - 83393 7.4 85 43 Op 1 1/0.353 - CDS 83395 - 83634 305 ## COG4095 Uncharacterized conserved protein - Term 83648 - 83696 6.1 86 43 Op 2 . - CDS 83709 - 85142 1546 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 85165 - 85224 7.5 - Term 85190 - 85240 -0.8 87 44 Op 1 . - CDS 85242 - 86813 1337 ## COG0661 Predicted unusual protein kinase 88 44 Op 2 . - CDS 86822 - 87115 494 ## GALLO_1219 hypothetical protein - Prom 87155 - 87214 5.9 + Prom 87471 - 87530 7.2 89 45 Tu 1 . + CDS 87568 - 88491 874 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 88630 - 88659 -0.3 - Term 88618 - 88647 0.5 90 46 Tu 1 . - CDS 88660 - 90579 2564 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Term 90885 - 90928 8.0 91 47 Tu 1 . - CDS 90941 - 91780 931 ## COG3711 Transcriptional antiterminator - Prom 91911 - 91970 3.7 - Term 91811 - 91875 2.2 92 48 Tu 1 . - CDS 91977 - 93509 1482 ## COG0038 Chloride channel protein EriC - Prom 93579 - 93638 4.7 - Term 93616 - 93654 4.0 93 49 Op 1 25/0.000 - CDS 93664 - 94737 1326 ## COG0687 Spermidine/putrescine-binding periplasmic protein 94 49 Op 2 36/0.000 - CDS 94730 - 95518 923 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 95 49 Op 3 30/0.000 - CDS 95515 - 96309 718 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 96 49 Op 4 3/0.059 - CDS 96293 - 97447 1461 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 97 49 Op 5 1/0.353 - CDS 97475 - 98377 995 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 98438 - 98497 3.9 - Term 98444 - 98498 2.0 98 50 Op 1 17/0.000 - CDS 98506 - 98988 290 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 99 50 Op 2 15/0.000 - CDS 98982 - 99344 174 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 - Term 99359 - 99390 -0.7 100 50 Op 3 4/0.059 - CDS 99411 - 100211 1162 ## COG0294 Dihydropteroate synthase and related enzymes 101 50 Op 4 2/0.118 - CDS 100249 - 100812 686 ## COG0302 GTP cyclohydrolase I 102 50 Op 5 . - CDS 100850 - 102103 1084 ## COG0285 Folylpolyglutamate synthase - Prom 102234 - 102293 5.4 - Term 102662 - 102700 5.6 103 51 Op 1 16/0.000 - CDS 102717 - 103595 1133 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 104 51 Op 2 34/0.000 - CDS 103629 - 104375 288 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 105 51 Op 3 17/0.000 - CDS 104381 - 105058 556 ## COG0765 ABC-type amino acid transport system, permease component 106 51 Op 4 . - CDS 105018 - 105701 492 ## COG0765 ABC-type amino acid transport system, permease component - Prom 105731 - 105790 11.1 - Term 105847 - 105879 4.0 107 52 Op 1 . - CDS 105950 - 107668 1330 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 108 52 Op 2 . - CDS 107684 - 108571 548 ## COG2962 Predicted permeases 109 52 Op 3 13/0.000 - CDS 108558 - 109424 1056 ## COG0083 Homoserine kinase 110 52 Op 4 . - CDS 109483 - 110769 1662 ## COG0460 Homoserine dehydrogenase - Prom 110844 - 110903 8.8 + Prom 110904 - 110963 5.6 111 53 Tu 1 . + CDS 110992 - 111942 894 ## COG0726 Predicted xylanase/chitin deacetylase - Term 111935 - 111984 8.8 112 54 Tu 1 . - CDS 112013 - 112192 121 ## - Prom 112356 - 112415 8.3 + Prom 112391 - 112450 8.0 113 55 Tu 1 . + CDS 112521 - 113117 409 ## COG1309 Transcriptional regulator + Term 113129 - 113189 9.2 - Term 113115 - 113175 9.2 114 56 Tu 1 . - CDS 113197 - 113661 495 ## GALLO_1245 hypothetical secreted protein - Prom 113730 - 113789 8.2 + Prom 113649 - 113708 3.9 115 57 Tu 1 . + CDS 113779 - 113979 74 ## GALLO_1246 putative transcriptional regulator - Term 114007 - 114040 4.5 116 58 Op 1 47/0.000 - CDS 114080 - 114463 553 ## PROTEIN SUPPORTED gi|15458846|gb|AAL00015.1| 50S Ribosomal protein L12 117 58 Op 2 . - CDS 114517 - 115020 701 ## PROTEIN SUPPORTED gi|21910289|ref|NP_664557.1| 50S ribosomal protein L10 - Prom 115185 - 115244 13.6 + Prom 115193 - 115252 7.8 118 59 Tu 1 . + CDS 115282 - 115422 98 ## + Prom 115465 - 115524 5.6 119 60 Tu 1 . + CDS 115559 - 117667 1444 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 117694 - 117727 1.4 + Prom 117688 - 117747 4.8 120 61 Op 1 . + CDS 117774 - 118421 578 ## COG2231 Uncharacterized protein related to Endonuclease III + Prom 118423 - 118482 2.4 121 61 Op 2 . + CDS 118512 - 119198 536 ## COG3619 Predicted membrane protein + Term 119202 - 119249 8.1 122 62 Op 1 1/0.353 - CDS 119238 - 120188 1034 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 123 62 Op 2 . - CDS 120201 - 121577 1314 ## COG0833 Amino acid transporters - Prom 121659 - 121718 8.0 - Term 121842 - 121869 -0.8 124 63 Op 1 4/0.059 - CDS 121875 - 122468 654 ## COG0218 Predicted GTPase 125 63 Op 2 . - CDS 122479 - 123708 273 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 126 63 Op 3 . - CDS 123741 - 123911 212 ## GALLO_1256 hypothetical protein 127 63 Op 4 16/0.000 - CDS 123928 - 124422 614 ## COG0262 Dihydrofolate reductase - Prom 124442 - 124501 4.1 - Term 124468 - 124500 -1.0 128 63 Op 5 . - CDS 124510 - 125349 976 ## COG0207 Thymidylate synthase - Prom 125394 - 125453 5.7 + Prom 125472 - 125531 7.9 129 64 Op 1 2/0.118 + CDS 125670 - 126848 1412 ## COG3425 3-hydroxy-3-methylglutaryl CoA synthase 130 64 Op 2 . + CDS 126742 - 128106 1224 ## COG1257 Hydroxymethylglutaryl-CoA reductase + Term 128112 - 128147 4.1 + Prom 128191 - 128250 6.7 131 65 Op 1 . + CDS 128283 - 128726 362 ## GALLO_1261 hypothetical protein 132 65 Op 2 . + CDS 128716 - 129372 690 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 129381 - 129441 8.3 133 66 Op 1 3/0.059 - CDS 129412 - 130410 1050 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 134 66 Op 2 5/0.059 - CDS 130452 - 131459 752 ## COG1577 Mevalonate kinase 135 66 Op 3 5/0.059 - CDS 131446 - 132396 965 ## COG3407 Mevalonate pyrophosphate decarboxylase 136 66 Op 4 . - CDS 132378 - 133256 1082 ## COG1577 Mevalonate kinase - Prom 133321 - 133380 7.0 - Term 133340 - 133387 5.1 137 67 Op 1 . - CDS 133549 - 134592 1128 ## COG0435 Predicted glutathione S-transferase 138 67 Op 2 . - CDS 134609 - 135565 789 ## COG0435 Predicted glutathione S-transferase 139 67 Op 3 . - CDS 135562 - 135708 173 ## 140 67 Op 4 . - CDS 135710 - 136195 574 ## GALLO_1269 putative acetyltransferase, GNAT family 141 67 Op 5 16/0.000 - CDS 136205 - 137059 931 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 137088 - 137147 3.2 - Term 137169 - 137204 5.1 142 67 Op 6 34/0.000 - CDS 137209 - 137967 676 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 143 67 Op 7 17/0.000 - CDS 137988 - 138668 684 ## COG0765 ABC-type amino acid transport system, permease component 144 67 Op 8 31/0.000 - CDS 138678 - 139370 508 ## COG0765 ABC-type amino acid transport system, permease component 145 67 Op 9 . - CDS 139380 - 140258 1289 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 146 67 Op 10 . - CDS 140285 - 141286 1238 ## GALLO_1275 hypothetical protein - Prom 141311 - 141370 9.2 - Term 141387 - 141441 10.1 147 68 Tu 1 . - CDS 141443 - 141631 80 ## GALLO_1276 hypothetical protein - Prom 141726 - 141785 8.4 + Prom 141780 - 141839 7.8 148 69 Op 1 1/0.353 + CDS 141867 - 142772 975 ## COG0583 Transcriptional regulator 149 69 Op 2 . + CDS 142839 - 143678 820 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 143724 - 143759 1.3 - Term 143712 - 143747 5.1 150 70 Op 1 40/0.000 - CDS 143839 - 145068 1106 ## COG0642 Signal transduction histidine kinase 151 70 Op 2 1/0.353 - CDS 145077 - 145757 850 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 152 70 Op 3 . - CDS 145788 - 146411 508 ## COG2357 Uncharacterized protein conserved in bacteria - Prom 146432 - 146491 7.0 - Term 146482 - 146512 2.0 153 71 Op 1 24/0.000 - CDS 146547 - 147173 633 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 154 71 Op 2 12/0.000 - CDS 147166 - 147939 371 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 155 71 Op 3 13/0.000 - CDS 147952 - 148872 1145 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 156 71 Op 4 . - CDS 148862 - 149497 574 ## COG1174 ABC-type proline/glycine betaine transport systems, permease component 157 71 Op 5 . - CDS 149487 - 149939 386 ## GALLO_1286 putative transcriptional regulator, MarR family 158 71 Op 6 1/0.353 - CDS 149929 - 150906 1213 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 151027 - 151086 8.3 - Term 151121 - 151160 6.5 159 72 Op 1 35/0.000 - CDS 151175 - 152947 186 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 160 72 Op 2 4/0.059 - CDS 152937 - 154751 2002 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 161 72 Op 3 . - CDS 154755 - 155195 266 ## COG1846 Transcriptional regulators - Prom 155237 - 155296 5.4 - Term 155314 - 155349 5.3 162 73 Op 1 3/0.059 - CDS 155370 - 155780 331 ## COG0242 N-formylmethionyl-tRNA deformylase 163 73 Op 2 . - CDS 155777 - 156286 261 ## PROTEIN SUPPORTED gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase - Prom 156483 - 156542 10.9 - Term 156420 - 156452 3.1 164 74 Tu 1 . - CDS 156553 - 157902 1848 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 157953 - 158012 10.1 + Prom 157985 - 158044 4.2 165 75 Tu 1 . + CDS 158149 - 158646 414 ## GALLO_1294 hypothetical protein + Term 158662 - 158699 4.0 - Term 158639 - 158694 5.3 166 76 Op 1 2/0.118 - CDS 158703 - 159194 445 ## COG0780 Enzyme related to GTP cyclohydrolase I 167 76 Op 2 22/0.000 - CDS 159207 - 159920 529 ## COG0602 Organic radical activating enzymes 168 76 Op 3 11/0.000 - CDS 159913 - 160359 402 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 169 76 Op 4 1/0.353 - CDS 160365 - 161012 486 ## COG0603 Predicted PP-loop superfamily ATPase - Prom 161144 - 161203 6.2 - Term 161187 - 161239 6.2 170 77 Op 1 35/0.000 - CDS 161253 - 163022 207 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 171 77 Op 2 . - CDS 163025 - 164764 169 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 172 77 Op 3 4/0.059 - CDS 164842 - 166713 2110 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 173 77 Op 4 1/0.353 - CDS 166710 - 167915 1309 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 174 77 Op 5 1/0.353 - CDS 167912 - 168679 1180 ## COG0289 Dihydrodipicolinate reductase 175 77 Op 6 3/0.059 - CDS 168699 - 169547 742 ## COG1307 Uncharacterized protein conserved in bacteria 176 77 Op 7 . - CDS 169547 - 169927 515 ## COG4835 Uncharacterized protein conserved in bacteria - Prom 169951 - 170010 5.8 177 78 Op 1 . - CDS 170056 - 170829 754 ## COG3548 Predicted integral membrane protein 178 78 Op 2 . - CDS 170885 - 171457 484 ## COG1705 Muramidase (flagellum-specific) - Prom 171583 - 171642 8.8 - Term 171847 - 171892 11.3 179 79 Tu 1 . - CDS 171945 - 173708 2246 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 173818 - 173877 4.1 - Term 173821 - 173851 0.7 180 80 Op 1 . - CDS 173888 - 174358 522 ## COG0716 Flavodoxins - Prom 174388 - 174447 2.8 - Term 174377 - 174418 -1.0 181 80 Op 2 . - CDS 174450 - 175067 932 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 182 80 Op 3 2/0.118 - CDS 175088 - 175885 774 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 183 80 Op 4 . - CDS 175934 - 176920 1286 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 176994 - 177053 10.3 - Term 177005 - 177051 9.0 184 81 Tu 1 . - CDS 177055 - 178182 780 ## COG4292 Predicted membrane protein - Prom 178210 - 178269 6.7 - Term 178339 - 178371 1.3 185 82 Op 1 9/0.000 - CDS 178389 - 180245 1979 ## COG0685 5,10-methylenetetrahydrofolate reductase 186 82 Op 2 . - CDS 180259 - 182493 2902 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 182550 - 182609 9.8 - Term 182659 - 182688 1.4 187 83 Op 1 19/0.000 - CDS 182711 - 184681 2686 ## COG1299 Phosphotransferase system, fructose-specific IIC component 188 83 Op 2 10/0.000 - CDS 184678 - 185589 1308 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 189 83 Op 3 . - CDS 185586 - 186299 632 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 186358 - 186417 7.8 - Term 186478 - 186530 13.5 190 84 Op 1 . - CDS 186590 - 187600 257 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 191 84 Op 2 . - CDS 187601 - 188113 580 ## COG2320 Uncharacterized conserved protein - Term 188121 - 188157 4.1 192 85 Op 1 30/0.000 - CDS 188165 - 188902 885 ## COG0336 tRNA-(guanine-N1)-methyltransferase 193 85 Op 2 . - CDS 188892 - 189410 619 ## COG0806 RimM protein, required for 16S rRNA processing - TRNA 189492 - 189563 64.7 # Glu TTC 0 0 - TRNA 189594 - 189665 64.6 # Gln TTG 0 0 + Prom 189671 - 189730 7.2 194 86 Tu 1 . + CDS 189853 - 190002 142 ## SDEG_0066 putative transposase + Term 190180 - 190218 -1.0 195 87 Op 1 19/0.000 - CDS 190112 - 190360 270 ## COG1837 Predicted RNA-binding protein (contains KH domain) 196 87 Op 2 . - CDS 190385 - 190657 452 ## PROTEIN SUPPORTED gi|55821524|ref|YP_139966.1| 30S ribosomal protein S16 - Prom 190718 - 190777 8.0 - Term 190733 - 190769 4.1 197 88 Op 1 . - CDS 190811 - 191194 470 ## GALLO_1326 hypothetical secreted protein 198 88 Op 2 . - CDS 191209 - 191616 483 ## GALLO_1327 hypothetical secreted protein - Prom 191665 - 191724 10.9 - Term 191732 - 191776 8.5 199 89 Op 1 . - CDS 191806 - 192555 499 ## COG0500 SAM-dependent methyltransferases 200 89 Op 2 . - CDS 192574 - 193164 444 ## COG0398 Uncharacterized conserved protein - Term 193182 - 193209 0.1 201 89 Op 3 36/0.000 - CDS 193247 - 194479 339 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 202 89 Op 4 24/0.000 - CDS 194491 - 195201 338 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 203 89 Op 5 . - CDS 195201 - 196430 1643 ## COG0845 Membrane-fusion protein 204 89 Op 6 . - CDS 196423 - 196533 56 ## - Prom 196572 - 196631 4.1 - Term 196617 - 196652 5.1 205 90 Op 1 24/0.000 - CDS 196675 - 199854 4327 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) - Prom 199884 - 199943 2.2 206 90 Op 2 4/0.059 - CDS 200023 - 201111 1344 ## COG0505 Carbamoylphosphate synthase small subunit 207 90 Op 3 6/0.000 - CDS 201190 - 202116 985 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 208 90 Op 4 7/0.000 - CDS 202121 - 203383 1022 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 209 90 Op 5 4/0.059 - CDS 203415 - 203936 839 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase - Prom 204082 - 204141 5.9 - Term 204146 - 204183 6.4 210 91 Op 1 15/0.000 - CDS 204191 - 205087 365 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 211 91 Op 2 2/0.118 - CDS 205071 - 205544 424 ## COG0597 Lipoprotein signal peptidase 212 91 Op 3 1/0.353 - CDS 205541 - 206458 972 ## COG0583 Transcriptional regulator - Prom 206578 - 206637 6.8 - Term 206618 - 206659 5.6 213 92 Op 1 14/0.000 - CDS 206680 - 206973 495 ## PROTEIN SUPPORTED gi|15674862|ref|NP_269036.1| 50S ribosomal protein L27 214 92 Op 2 14/0.000 - CDS 206995 - 207330 287 ## PROTEIN SUPPORTED gi|157150851|ref|YP_001450118.1| ribosomal protein 215 92 Op 3 . - CDS 207343 - 207657 514 ## PROTEIN SUPPORTED gi|15674860|ref|NP_269034.1| 50S ribosomal protein L21 - Prom 207781 - 207840 5.9 216 93 Tu 1 . + CDS 207741 - 207776 55 ## PROTEIN SUPPORTED gi|77412091|ref|ZP_00788416.1| ribosomal protein L21 217 94 Op 1 . - CDS 207852 - 208397 590 ## GALLO_1344 putative acetyltransferase (GNAT) family 218 94 Op 2 1/0.353 - CDS 208388 - 209602 1492 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) - Prom 209622 - 209681 3.8 - Term 209657 - 209707 8.1 219 95 Op 1 7/0.000 - CDS 209708 - 210922 1621 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase 220 95 Op 2 . - CDS 210960 - 212252 1402 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes - Prom 212292 - 212351 5.0 + Prom 212165 - 212224 8.8 221 96 Tu 1 . + CDS 212302 - 212760 586 ## GALLO_1348 Ser and Thr rich hypothetical protein + Term 212770 - 212816 0.2 + Prom 212769 - 212828 2.4 222 97 Tu 1 . + CDS 212899 - 214143 1241 ## COG0285 Folylpolyglutamate synthase + Term 214193 - 214236 -0.9 - Term 214132 - 214167 4.2 223 98 Tu 1 . - CDS 214180 - 215097 1135 ## COG0039 Malate/lactate dehydrogenases - Prom 215121 - 215180 4.0 - Term 215148 - 215184 4.2 224 99 Op 1 1/0.353 - CDS 215195 - 215533 650 ## COG3679 Uncharacterized conserved protein 225 99 Op 2 1/0.353 - CDS 215545 - 216651 1484 ## COG0287 Prephenate dehydrogenase - Term 216677 - 216712 4.2 226 100 Op 1 7/0.000 - CDS 216732 - 217898 1550 ## COG0082 Chorismate synthase 227 100 Op 2 7/0.000 - CDS 217900 - 218967 1198 ## COG0337 3-dehydroquinate synthetase 228 100 Op 3 8/0.000 - CDS 218990 - 219859 1197 ## COG0169 Shikimate 5-dehydrogenase 229 100 Op 4 2/0.118 - CDS 219849 - 220505 691 ## COG0710 3-dehydroquinate dehydratase 230 100 Op 5 . - CDS 220523 - 221686 1073 ## COG1092 Predicted SAM-dependent methyltransferases - Prom 221775 - 221834 10.6 + Prom 221719 - 221778 8.7 231 101 Tu 1 . + CDS 221821 - 223989 2177 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 224012 - 224056 9.3 Predicted protein(s) >gi|304426198|gb|AEEM01000015.1| GENE 1 21 - 977 1249 318 aa, chain - ## HITS:1 COG:SPy1225 KEGG:ns NR:ns ## COG: SPy1225 COG1079 # Protein_GI_number: 15675189 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 318 1 318 318 438 77.0 1e-123 MSFTTMLALLVSSMLIYSAPLIFTSIGGTFSERAGVVNVGLEGIMVMGAFSGVLFNLSFA DVFGNATPWVASIVAGFVGVLYSLIHAVATINFRADHVVSGTVLNLIAPSFAVFQCRYLF GKGQTDTISETFGRFSFPILKDIPVIGQIFFNNTSLVAYVAILVSFISWFIIFKTRFGLR LRSVGEHPQAADTLGINVYLMRYAGVMISGFFGGIGGAVYAQTISNNFAVTTIAGPGFIA LAAMIFGRWNPIGAMLSSLFFGLSQSLAIIGAQLPFFSSIPSVYLKVAPYVLTIVVLAAF FGKAVAPKADGVNYIKSK >gi|304426198|gb|AEEM01000015.1| GENE 2 979 - 2031 1342 350 aa, chain - ## HITS:1 COG:SP0847 KEGG:ns NR:ns ## COG: SP0847 COG4603 # Protein_GI_number: 15900734 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 350 1 352 352 424 67.0 1e-118 MSKKTQKWAVPLIAVVLGMLLGAILMLCFGYNPLWGYNDLLYTAFGSIKNIGEIFRAMGP LILIALGFSVASKAGFFNVGLPGQALIGWVMSVWFALSFPDLPKPISVICTIVVGLVAGG IAGAIPGILRAFLGTSEVIVTIMMNYIILYSTQYLIQNVFPDNIMRTTEATIKVSENASY QTEWLSALTNNSRMNIGIFIAFIAVIIIWFMMKKTTLGYEITSVGINPHAAEYAGMSAKR LIIISMIISGALAGLGGTVEGLGTFENVYSQTSSLSIGWDGMAVSLLAVNNAIGIPFAAF LYAVLSIGKTGMIGIPSEVIDVVSAFIIFFVGADYMIRHFLKTKKVEGGK >gi|304426198|gb|AEEM01000015.1| GENE 3 2024 - 3562 176 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 260 482 12 221 312 72 26 2e-11 MTQEKVIEMREITKKFGDFVANDHINLEVKKGEIHALLGENGAGKSTLMNMLAGLLQPTS GEILVKGEVAHLDSPSKSAKMGIGMVHQHFMLVEAFTVAENIILGNEVTKKGGILNLKKA TEEIKELSERYGLAVDPSAKISDITVGAQQRVEILKTLYRGADIIIFDEPTAVLTPSEIA ELLDIMRNLVKEGKSIILITHKLDEIRAVADRVTVIRHGKSIQTVPVADSTSEELAEMMV GRAVSFKTEKIPANPKDVVLSIKDLVVNENRGVPAVKELSLDVRAGEIVGIAGIDGNGQS ELVEAITGLRKVESGNVIIKGVDMTNERPRKITELGVGHVPEDRHRDGMVLDMTIAENIA LQTYYKEPFSKHGFMNYNKLNEHARELMAEFDVRAASELVAGGALSGGNQQKAVIAREID RNPDLLIVNQPTRGLDVGAIEYIRKRLVAERDKGKAVLVISFELDEILDVSDRIAVIHDG KIQGILDAAQTNKQELGILMAGGKVEKEDANV >gi|304426198|gb|AEEM01000015.1| GENE 4 3726 - 4790 1721 354 aa, chain - ## HITS:1 COG:SP0845 KEGG:ns NR:ns ## COG: SP0845 COG1744 # Protein_GI_number: 15900732 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Streptococcus pneumoniae TIGR4 # 32 350 35 349 350 327 63.0 3e-89 MNKKIVGLGLAAVATLALGACSRSNSSSSSSDSSVKAAIVTDTGGVDDKSFNQSAWEGLQ AWGKENDLTKDTDYTYFQSDSESDYATNLDSAVSNGYNLIFAIGYNLHDAVEEAAPENED VNYVIIDDTVSDQDNVESVLFADNEGAYLAGIAAAMQTKTKHVGFVGGVESDTITRFEAG FKAGVASVDSSIKVDVQYVGSYSDSAKGKTIAATMYAGGADVIYHAAGGSGTGVFSQAKE INEKLTADSDQKVWVIGVDRDQSEEGDYTSSDNVDSNFVLTSTIKEVGQVVQDISNEQLK GEKFNGNTTKTYGLADGGVDVVTDNLSDSIKEAVETAKQKIIDGEITVDDGLSD >gi|304426198|gb|AEEM01000015.1| GENE 5 4979 - 5641 757 220 aa, chain - ## HITS:1 COG:SP0843 KEGG:ns NR:ns ## COG: SP0843 COG0274 # Protein_GI_number: 15900730 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Streptococcus pneumoniae TIGR4 # 1 220 1 220 220 289 73.0 3e-78 MAINRYIDHTLLKPESTQTQIDKLIAEAVEHQFASVCVNPTWVSYAAKALKGTEVNVCTV IGFPLGANTSSVKAFETKDAVANGADEIDMVINIGQLKSGQYDAVEADIRAVVEASGDKL VKVIIETCLLTDDEKVKACQLAVAAGADYVKTSTGFSTAGANIADVTLMRKTVGPNIGVK AAGGTRSYADAEAFIKAGATRIGTSAGVVIVNGETANSSY >gi|304426198|gb|AEEM01000015.1| GENE 6 6131 - 6724 614 197 aa, chain - ## HITS:1 COG:SP0841 KEGG:ns NR:ns ## COG: SP0841 COG2813 # Protein_GI_number: 15900728 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Streptococcus pneumoniae TIGR4 # 1 195 1 195 196 296 72.0 2e-80 MTKMYYAENPDSAHDIHELKVTLLGQPFTFLTDSGVFSKKMIDYGSQVLLNTVDFEKGKM LLDLGCGYGPLGISLAKVQGVQATMVDINNRAIDLAQKNAEKNGVTANIFQSNIYEKVTG TFDYIISNPPIRAGKQVVHTIIADSINYLNDGGSLTIVIQKKQGAPSAKAKMEEIFGNVD ILKRDKGYYILRSTKTE >gi|304426198|gb|AEEM01000015.1| GENE 7 6838 - 7758 625 306 aa, chain + ## HITS:1 COG:SPy1233 KEGG:ns NR:ns ## COG: SPy1233 COG1072 # Protein_GI_number: 15675195 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 306 1 306 306 409 72.0 1e-114 MTNEFINFDNISRKTWQELHRKTQPLLTAEELESIKSLNDNINIQDVVEVYLPLISLIQI YKNAQENLSFSKSIFLKKEVSKRPFIIGISGSVAVGKSTTSRLLQLLLSRTFKDSKVEMV TTDGFIYPNDILIERNILDRKGFPESYNMELLLNFLDTIKNGMVAEIPVYSHEIYDIIPD QKQTIDTPDFLIVEGINVFQNQKNKRLYMTGYFDFSIYIDAENDNIEKWYLERFESLLEL AKADKNNYYHRFVDMSQSEALALAKNTWKTINLVNLEKYIEPTRNRAELILHKAADHKID SIYLKK >gi|304426198|gb|AEEM01000015.1| GENE 8 7833 - 8084 371 83 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|56807502|ref|ZP_00365438.1| COG0268: Ribosomal protein S20 [Streptococcus pyogenes M49 591] # 1 81 1 81 82 147 96 4e-34 MEVKTLANIKSAIKRAELNVKQNEKNSAQKSAMRSAIKAFEANPSEELFRAASSSIDKAE SKGLIHKNKASRDKARLAAKLAN >gi|304426198|gb|AEEM01000015.1| GENE 9 8220 - 9560 1464 446 aa, chain - ## HITS:1 COG:SPy1236 KEGG:ns NR:ns ## COG: SPy1236 COG0642 # Protein_GI_number: 15675197 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 2 443 1 436 436 483 58.0 1e-136 MLNKLQKKLSSGTFSHFFHFFAVFTGIFVIMTVIILQIMRYGLYSSVDTSLQNAADNAND YVVRTMERSDTLQSDDSSTDTFSGGTSSSGKAKPSTGGVGLSNVSVLLYDEDGKILNALD AFVQFGTLSTTFDEDSVGEIKEQKITTIFGQTEKYHVLTVKVSSSEYPSIKYATFLVSVR QLDEASERYVTITITVMVIFWIISVVASVYLANWTRKPIMESYEKQKSFVENASHELRTP LAVLQNRLESLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEDI QPTTFNEIFENYDMIAEENGKTFVGHNLAERPIKSDRTLLKQLMTILFDNAIKYTDDDGV IEFTVKTTDKQTILTVADNGPGISDADKVKIFDRFYRVDKARTRQKGGFGLGLSLAKQIV DVLKGDIQVKDNQPKGTIFEVRFNRH >gi|304426198|gb|AEEM01000015.1| GENE 10 9550 - 10224 740 224 aa, chain - ## HITS:1 COG:SP0798 KEGG:ns NR:ns ## COG: SP0798 COG0745 # Protein_GI_number: 15900691 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 224 1 224 224 362 87.0 1e-100 MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGEEGLYEAESGVYDLILLDLMLPEKDGF QVLKELREKGVSTPVLIMTAKESLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRSG KYNDNTLSYEELTVDTSTNTTIANGKEVELLGKEFDLLVYFLQNQNVILPKSQIFDRIWG FDSDTTISVVEVYVSKIRKKLKGTTFAKNLQTLRSVGYILKNAE >gi|304426198|gb|AEEM01000015.1| GENE 11 10422 - 12965 2761 847 aa, chain - ## HITS:1 COG:SPy1239 KEGG:ns NR:ns ## COG: SPy1239 COG0308 # Protein_GI_number: 15675199 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Streptococcus pyogenes M1 GAS # 1 844 1 843 845 1214 70.0 0 MKTVEHFIEKFVPENYNIFLDINRQSKTFSGNVAISGEALDNVISFHQKDLAIASVLLDN QNLEFTIDNNNEAVHVELPETGTMTLVLEFSGKITDNMTGIYPSYYTVDGVKKEVISTQF ESHFAREAFPCVDEPEAKATFDLSIKFDQTEGEIVLSNMPEVDADRRKETGLWTFDTTPR MSSYLLAFALGDLQGKTAKTKNGTEVGVFSTKAHALKSLDFALDIAVRVIDFYEDYYGVK YPIPLSYHVALPDFSAGAMENWGLVTYREVYLLVDDNSTVKSRQNVALVVAHELAHQWFG NLVTMKWWDDLWLNESFANMMEYVSVDAIEPSWNIFEDFQTAGLPLALQRDATDGVQSVH VEVKHPDEINTLFDPAIVYAKGSRLMHMLRRWLGDDDFRAGLKIYFEKHQYGNTIGRDLW DALSEASGKDVAAFMDAWLEQPGYPVVTAEVVDDTLVLSQKQFFIGEGVDENRIWPIPLN SNWQGLPETLTEARLEIPNYSQLVAQNEGALRLNTENTAHYITNYKGELLNTVLEQLTEL DTVSKLQVIQERRLLAESGEISYAELVPLLTKLADETSYLVAEAISQVVEGLDVFLTEGS QAQAQFKTLLSHLMQKNYDRLGFEPQAGESDEDEMVRQNTISLMLYADNEDAVTKAEAIF HQYKDNIEAIPASIRLSVLANQIKHAETEELVSLYLDTYVKTNDGNFRRQLASALSNTKS EVTVERILSALKNKDIVKPQDLAMSWYRPFLEKDFAQGAFWTWARENWAWIKSALGGDMS FDKFVIYPANSFKTAERLAEYKAFFEPQLDDMAISRNIAMGIKEISARLDLISTSKVAVE EALAEVE >gi|304426198|gb|AEEM01000015.1| GENE 12 13188 - 13841 902 217 aa, chain - ## HITS:1 COG:SPy1240 KEGG:ns NR:ns ## COG: SPy1240 COG0704 # Protein_GI_number: 15675200 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Streptococcus pyogenes M1 GAS # 1 217 1 217 217 316 79.0 2e-86 MLRSKFDDELEKLHNQFYAMGTEVLSQINKTVRAFISHDRELAKEVIEGDEIVNNFETKL EKKSLEIIALQQPVSQDLRTVITVLKASSDVERMGDHAASIAKATIRVKGEERLPEVEAE IKKMGKAVRDMVEEALDVYITGDEERAYEVAASDEVIDNYFRDIQNMAVESIRQQPDTVF AGKEYLQVITYLERIGDYARNICEWVVYLKTGKIIEL >gi|304426198|gb|AEEM01000015.1| GENE 13 13872 - 14630 292 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 247 1 239 245 117 31 5e-25 MTEPILRVSDLSVYYNKKKALNNVSMDFYPNEITALIGPSGSGKSTLLRSINRMGDLNPE VTLTGSITYNGHNIYSPRTDTVELRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQV LDEAVESSLIGASIWDEVKDRLHDSALGLSGGQQQRVCVARVLATSPKIILLDEPTSALD PISAGKVEDTLYGLKDKYTMLIVTRSMQQASRISDRTGFFLGGDLIEYGKTHEMFMDPKR KETEDYITGKFG >gi|304426198|gb|AEEM01000015.1| GENE 14 14642 - 15445 278 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 24 252 5 229 245 111 33 2e-23 MTEYNWNERHIITFPEEKLALATKDLHVYYGQKEAIKGIDMQFEKNKITALIGPSGCGKS TFLRSLNRMNDTIDIAKVTGEILYEGIDVNAKNINVYEMRKHIGMVFQRPNPFAKSIYKN ITFAYERAGVKDKQFLDEIVETSLKQAALWDQVKDDLHKSAFTLSGGQQQRLCIARAIAV KPDILLMDEPASALDPVATMQLEDTMFELKKDYTIIIVTHNMQQAARASDYTAFFYLGDL IEYDKTNNIFQNAKLQSTSDYVSGHFG >gi|304426198|gb|AEEM01000015.1| GENE 15 15456 - 16343 1186 295 aa, chain - ## HITS:1 COG:SPy1243 KEGG:ns NR:ns ## COG: SPy1243 COG0581 # Protein_GI_number: 15675203 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 294 1 294 295 479 88.0 1e-135 MHAKKIDKLATGVLYTIAGIIVAILASLLLYILVNGLPHVSWSFLTGKSSSYQAGGGIGI QLYNSLFLLVITLIISIPLSMGAGIYLSEYAKKGRFTNFIRTCIEILSSLPSVVVGLFGY LIFVVQFQYGFSIISGALALTVFNLPQMTRNVEDGLRNVHHTQREAGLALGLSRWETVVH VVVPEALPSIVTGIVLASGRIFGEAAALIYTAGQSAPALDWSNWNPLSVTSPISIFRQAE TLAVHIWKVNSEGTIPDATQVSQGSAAVLLVFILIFNLSARYIGKKLHAKLTSAN >gi|304426198|gb|AEEM01000015.1| GENE 16 16333 - 17250 838 305 aa, chain - ## HITS:1 COG:SPy1244 KEGG:ns NR:ns ## COG: SPy1244 COG0573 # Protein_GI_number: 15675204 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 305 1 311 311 438 83.0 1e-123 MRNQELEKQLTSPSKNSRLEKFGKGLTLFCLVLIVFIVAMILIFVAQKGLSTFFVDGVNP LTFLFGSKWDPSSGSFGALPMILGSFIVTILSALIATPIAIGAAVFMTEVSPKYGAKILQ PAIELLTGIPSVVYGFIGLQVIVPFVRSIFGGTGFGILSGVCVLFVMILPTVTFMTVDSL KAVPRHYKEASLAMGATRWQTIWRVILNAARPGIFTAVIFGMARAFGEALAIQMVVGNSA VVPTSLTTPAATLTSVLTMGIGNTVMGTVQNNVLWSLALVLLIMSLGFNMLVKFITRERK RNYAR >gi|304426198|gb|AEEM01000015.1| GENE 17 17260 - 18126 1045 288 aa, chain - ## HITS:1 COG:SPy1245 KEGG:ns NR:ns ## COG: SPy1245 COG0226 # Protein_GI_number: 15675205 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 288 288 402 76.0 1e-112 MKKMKKLSFLLLITSVSIILSGCASWIDKGQSITSVGSTALQPLVEAAADEFGTANIGKT VNVQGGGSGTGLSQVQSGAVQIGNSDVFAEEKDGIDADQLVDHQVAVAGLAVIINDNVKV DNLTTEQLRKIFTGEITNWKEVGGQDLEISIINRAASSGSRATFDSVIMNGESAVQSQEQ DSNGMVKSIVSQTPGAISYLAFAYVDDSVKTISLNGYEPTAENVTTNNWPLWSYEHMYTK GEPTGLTKEFLDYVMSDEVQKGIVEQMGYISVNDMQVTKSADGTVTEK >gi|304426198|gb|AEEM01000015.1| GENE 18 18269 - 19579 891 436 aa, chain - ## HITS:1 COG:SPy1246_1 KEGG:ns NR:ns ## COG: SPy1246_1 COG0144 # Protein_GI_number: 15675206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pyogenes M1 GAS # 1 292 2 292 297 438 73.0 1e-122 MLLPEKFIEKYRNILGDEADDFLATFDQEAISGFRVNPLKNVQQTFDTPIPNTPWGHYGK VSGKSPEHVSGLVYSQEPAAQMVAQVAAPQENMRVLDLAAAPGGKSTHLLSYMNNTGVLV SNEISSKRSKVLVENIERFGARNVVVTNESSQKLAKVFKYYFDLIVFDGPCSGEGMFRKD PAATQYWHEDYPAECATLQKEILEEAMKMLAIGGTLVYSTCTWSPEENEGVVKWLLDKYD YLELVDIEKINGMVEGIDLPQVARMYPHHFKGEGQFVAKLRDTRTAETRSVKPVKSNLTK AQLKLWQDFAEQHIKVDLAGILQTFGDNLYLLPEGLPDLGKLKIARNGLHLGTFKKNRFE PSFALGLSLSPDDVEQFVKIDIEQFKVYASGNIVKLEEPIQNGWYLVSINGNGIGFAKIT GNILKNYFPKGLRFYS >gi|304426198|gb|AEEM01000015.1| GENE 19 19722 - 20687 880 321 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1151 NR:ns ## KEGG: GALLO_1151 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 321 1 321 321 578 100.0 1e-163 MKGNHYRNFIVTLVIGIIFLAGGVVTAIVNYRNNTVTALSAKNQVFNGENTSADNGAMVV VNVYGIYEEPIADIDGHNTVIWLIAYDNGYVGVEAKEDDQQIAALISKGSDLSQHPQQLM VKYFDTNYNNSNGITSYSSAMETIVEPTTDLGERFSYSSYLSLSAANSDKQVNYIVAVII GGIGVFLIVLSFVTKAKTTKAFSEFYAEYPELNGSIEHLQDIAGYSNDKLKLTIYRHHLV SYYGAFAIMDLNDIQQLYHYVIKIKRTFITIGRNSMLIGITKNKKQKSISIKNIGKTTDS ELQPMFEYVAQHFPEIKLGKD >gi|304426198|gb|AEEM01000015.1| GENE 20 20899 - 22254 429 451 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 3 445 1 442 458 169 29 7e-41 MEVKQYDYIVIGGGSGGIASANRAAMHGAKVILFEAKEVGGTCVNLGCVPKKVMWYGAQV AETLNTYASEYGFQVGQTSFDFKTLKANREAYIDRIHASYERGFDNNGVERVYDYATFVD AHTVEVAGTYYTAPHILIATGGHALYPDIPGAQYGITSDGFFELDEVPKRTAVVGAGYIA VEVAGVLHALDSKTHLFVRRERPLRTFDKEIIDTLVDAMAENGPTLHTFSIPKEVIKNDD DSLTLVLENGETYTVDTLIWAIGRKANVTGFGLEKTGVELDDKGFIKTDDYENTSVDGIY ALGDVNGKLELTPVAVKAGRQLSERLFNDKPNAKMDYKDVATVIFSHPAIGSIGYSEEKA IAEFGEEQIKIYRSSFTPMYTALGSHRQPSKMKLVTLGKDEKIIGLHGIGYGVDEMIQGF SVAIKMGATKEDFDNTVAIHPTGSEEFVTMR >gi|304426198|gb|AEEM01000015.1| GENE 21 22267 - 22599 410 110 aa, chain - ## HITS:1 COG:SPy1971 KEGG:ns NR:ns ## COG: SPy1971 COG0526 # Protein_GI_number: 15675765 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pyogenes M1 GAS # 8 109 19 122 124 95 46.0 3e-20 MTTFANYFTPISAKEANAQLQTADNFILFIGRPTCPYCRRFEPKLTQVAKDNQLTVHFLN SENQDSDTQELRTTYDVPTVPGLLVAKSGHVKVVCDSSLSEEAILDFITH >gi|304426198|gb|AEEM01000015.1| GENE 22 22716 - 23039 391 107 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|184155113|ref|YP_001843453.1| hypothetical protein LAF_0637 [Lactobacillus fermentum IFO 3956] # 1 107 1 109 109 155 67 2e-36 MAITVNLYYKGTNGNAKKFMEEMEKSGTAAAIRAEKGNLRYDYFFPANDPETVLLIDSWE NQEAIDVHHASPMMETLAELREKYDLHMTVERYVSDDSEVDSEFIRK >gi|304426198|gb|AEEM01000015.1| GENE 23 23176 - 24000 1056 274 aa, chain - ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 1 274 1 269 269 270 59.0 2e-72 MIDWLMTQNVVLLALLAGLFTWGCTILGSAVVFFFTKVSRKLLDVMMGFAAGVMIAASFW SLLAPAIDYAHADYGKLAWLPAAIGFLLGGFSLRLIDALVPHLHLGKDVSEAEGIQPKKK LSKTALLFLAITIHNFPEGLAVGVTFGALASGNMTNAALIGAIGLAIGIGLQNIPEGAAL SIPIRADGSSRWRAFFMGAMSAIVEPIGAVLGAALVIVMLQIIPYALAFAAGAMIFVVVE ELIPESQTNGNTDIATLGLMVGFVIMMVMDVALG >gi|304426198|gb|AEEM01000015.1| GENE 24 24114 - 24671 399 185 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 8 182 5 179 185 158 45 2e-37 MTDGKCRAWYEGDHILEEYHDNEWCKVAHDDQFQFEMLCLEGASVGLSWKTIMHKRENYR RAFHDFDIDTCAKMSDDELEQLLSNSGLIRNRNKIFSVRKNAQIVQEIQKEFGSFDAYLW SFTDSKQIDNKWKTPEDVPTVSDLSERLSKDMKKRGIGFVGPVITYSFLQAVGIVNDHLV NCDYR >gi|304426198|gb|AEEM01000015.1| GENE 25 24689 - 25447 788 252 aa, chain - ## HITS:1 COG:SPy1247 KEGG:ns NR:ns ## COG: SPy1247 COG0483 # Protein_GI_number: 15675207 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Streptococcus pyogenes M1 GAS # 1 251 1 251 262 328 62.0 7e-90 MENKFTFAKALIRAAGDFIKDNMVQDLQIEEKTRFDDLVTNLDKATQELLITKIKQAYPN DNIMAEENNIHHPISDGNVWVLDPIDGTVNFVVQGANFAVMIAYYENGKGQFGLIYDVAN DILYSGGGQFDVYANDKQLTPYQDVALKRTLIGCNASMFSCNYCGIRDLIDQTLGVRVYG GAGLSMAYVMTGQLLAYFSYIQPWDYAAAKIMGEKLGYVLLTLDGKEPDFATRQKVMFVP KQKLSTIQTYLD >gi|304426198|gb|AEEM01000015.1| GENE 26 25437 - 25712 297 91 aa, chain - ## HITS:1 COG:SPy1248 KEGG:ns NR:ns ## COG: SPy1248 COG4476 # Protein_GI_number: 15675208 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 3 90 4 91 92 113 76.0 1e-25 MKNYSYPLDLSWSTEEIASVLHFLNQVEAAYETKVSVKDILDSYAIFKTIVKSKAQEKQI DREFERNSGYSTYQAVKAAKAKEKGYISLGK >gi|304426198|gb|AEEM01000015.1| GENE 27 25855 - 26259 393 134 aa, chain - ## HITS:1 COG:SPy1249 KEGG:ns NR:ns ## COG: SPy1249 COG1393 # Protein_GI_number: 15675209 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pyogenes M1 GAS # 1 134 1 134 134 226 88.0 8e-60 MITLFLSPSCTSCRKARAWLNEHDVKFQEHNIITSPLSREELMSILAFTENGTEDIISTR SKVFQKLDVDVDELSVSNLIDLISKNPGLLRRPIILDNKRMQIGFNEDEIRAFLPRDYRK QELRQATIKAEIEG >gi|304426198|gb|AEEM01000015.1| GENE 28 26302 - 27243 450 313 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 4 309 1 314 317 177 34 3e-43 MEKMEIQRIKDYKDITNAKDSVLVLGYFDGLHRGHKALFDKAKEIAKRDNLALTVLTFNE SPRLALSRFTSDLLLSLTSPEKRYEKFAEYGVDYLYLIDFTSTFSKLSAKNFLENYIKQL RAKTIVVGFDYKFGHDRKDAIDLAQQFNGDVVVVPEVQDNGEKISSTRIRQLIFEGNIKE VNRLLGYNFSTRGIVVHGDARGRTIGFPTANLAPIDNVFLPGDGVYVSDVIVNGKSYRAM TSVGKNVTFGGTELRLEANIFDFKDEIYGETVEIIWLDKIRDMVKFAGADELIEQLKSDK EVAANWKKDSQVP >gi|304426198|gb|AEEM01000015.1| GENE 29 27250 - 28128 890 292 aa, chain - ## HITS:1 COG:SPy1251 KEGG:ns NR:ns ## COG: SPy1251 COG0130 # Protein_GI_number: 15675211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Streptococcus pyogenes M1 GAS # 1 292 1 294 294 394 68.0 1e-110 MINGIINLRKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYM TEAGKIYRGQICLGYSTTTEDASGERLETTPVSDVAVEEVDLALRSFIGEITQIPPMYSA VKVNGKRLYEYARAGQTVERPERHVTIYDFKRTSPLEFKDDCCYFDFEVACSKGTYIRTL SVDLGKKLGYASHMSYLEREASAGLRLENALTLAEIADKVALEDFSFLLPVEYGVMDLPR VDLTEDQKIEISFGRKIALDRQDEQLAGFYEDKLVAILEPRDDLYKPHKVFI >gi|304426198|gb|AEEM01000015.1| GENE 30 28214 - 29569 1218 451 aa, chain - ## HITS:1 COG:SP0562 KEGG:ns NR:ns ## COG: SP0562 COG2461 # Protein_GI_number: 15900474 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 451 1 443 444 583 64.0 1e-166 MTENRIEILKDILLRLHHGADAKSVQEDFDQHFTGVSALEISMMEHELMGTDTGITFEDV MSLCNVHANLFKGAISDVDVPDAEQEGHPVYVFKQENLALRAAMLRIRRIIENYEKAENE EFRPDLIRGLKHQMSLLGQFQNHYNRKENLFFPVMERYGHDAPPKVMWGVDDNIRALFEK AQTAVEQLPDLTIEEISSAFEAFAKEFEEMIFKEEAILLMILLETLTQDDWLAIAEESDA YGYAIVKPTAKWQPHRENFKDTKQDLAHLTNQTEDSQENSTTDNQLTKVIDTPEGQFTIS FTPKKESQSFDRTSQQPFGNGYLSVEQANLILNHLPLEITFVNKDDIFQYYNDSKAPDEM IFKRAPSQIGRHVELCHPPKVLDKVKKIFTLLRSGERDKVVMWFKSEKLGKFVHVTYAAV RDENGEFQGVLEYVQEIQDFFELGSDNNRDI >gi|304426198|gb|AEEM01000015.1| GENE 31 29562 - 29801 292 79 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1163 NR:ns ## KEGG: GALLO_1163 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 79 1 79 79 144 100.0 9e-34 MNNIIDLSKPVAETIKEHPEVKEILVDLGFKPLSKPAMLNTVGKVTSLKAGAKLANISLE KIQRTLEFNGYEVIGGSYD >gi|304426198|gb|AEEM01000015.1| GENE 32 29883 - 30314 501 143 aa, chain - ## HITS:1 COG:RC0741 KEGG:ns NR:ns ## COG: RC0741 COG0454 # Protein_GI_number: 15892664 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Rickettsia conorii # 10 143 13 146 149 71 30.0 4e-13 MIIRPAQLLDIEKLSPLYAELGYPVKEAELVRRLKTVLSHPDYHLLVAVDDNEIIGMIGY AKMLFFENEGAYYRIIILAVLQNYRRKGVATTLIDAVKNRALSENIHALALNSGDTLERQ IAHRFYENYGFKQASRGYSLYLK >gi|304426198|gb|AEEM01000015.1| GENE 33 30366 - 31706 1313 446 aa, chain - ## HITS:1 COG:SPy1252 KEGG:ns NR:ns ## COG: SPy1252 COG4487 # Protein_GI_number: 15675212 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 446 1 446 446 518 74.0 1e-147 MNNIKCPHCGTVFTINETEYSQLLAQVRSNEFDKEIHDRLEKEKALLEEKSKNDLQTQAS AKDKEISELTTQLEQLKQTLALENQRLLSQKEQEITELKAQLENLSSVKELELSQALSKK DKELVEVQNQLERLSLENKNSLVEAVAAVEKERDDAKSKLALQEKEAELSLASVKSDYEA QLKAANEQVEFYKNFKAQQSTKAIGESLEVYAETEFNKVRAYAFPNATFVKDNEVSSRGS KGDFIYRETDENGIEILSIMFEMKNEADETKTKHKNRDFYKELDKDRREKNCEYAVLVTM LEADNDYFNTGIVDVSHEYEKMYVVRPQLFIQLIGILRNAALNSLKYKQELALVREQNID ITHFEDDLETFKNAFAKNYTSASNNFKKAIDEIDKSIRRMEEVKRFLTTSENQLRLANNK LDDVSVKKLTRKNPTMRAKFEALKEE >gi|304426198|gb|AEEM01000015.1| GENE 34 31787 - 32383 653 198 aa, chain - ## HITS:1 COG:SPy1254 KEGG:ns NR:ns ## COG: SPy1254 COG0732 # Protein_GI_number: 15675214 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Streptococcus pyogenes M1 GAS # 1 197 1 197 198 186 48.0 2e-47 MNELVENYKSNKIAKIPLKEITEHFKGKAVSKLGDSGNISVINLSDMDDTGIDYAHLKKI DCDEKSVSHYLLQEGDVLIASKGTVKKIAVFAEQDEPVIASANITVLRPTSDILGGYIRL FLASDLGQALLDETNTGKNVMNLNTQKIISIEIPKIPSIRQAYLIQGYEQGLKDYKRKLK RAKQEWQRIRSEVEKNLF >gi|304426198|gb|AEEM01000015.1| GENE 35 32563 - 33954 213 463 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 288 451 27 207 245 86 32 8e-16 MISVKNLKFTYLNSKKLSLKIDSLQVAKGECLVLCGKSGSGKTTFARLLNGLVPEYYQGK LEGDIQVVGMQPGQNSVEEMSQKIASVFQNPATQFFHRKVEHELVFPCENQGIAQADIQS RLKQTTELFNLEQLLNYDLLNASGGEQQRVAIATANMQNPQLLILDEPSANLDQTSVERL KSHLKALKALGVTIVIAEHRLDFLKDLGDTYLYFENGEVTHTWSRKEWLALSEDKRHQLG LRGGKNLSFASQTLPEVPAQNGLQVYELTLTAGKKSLGAISHLAFPAGKIIAILGQNGLG KSSFAKLLSGLNKSNGIISLAGHPLSEKERLKETAYVMQEISLQLFSDSVKKELLLGNQQ KKDYQKIADKLGLQDLLQRHPLSLSGGEQQRVLIGNALLSDKKIFIFDEPTSGLDYEHML AVGKLLQELKAAGKIVLVITHDKELVTTVCDYQLDFANYISNE >gi|304426198|gb|AEEM01000015.1| GENE 36 33954 - 34643 533 229 aa, chain - ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 6 195 3 195 226 100 35.0 2e-21 MNTVTIDVRTKIILLFFTNILLLLHISDGYECLLMISLGILFFLEGDRKRALYYVIPFLA LIILEDYLLSPEYVTSYIALFLVGGRRFLPCFMIGGSILKGSVHEFIVTMRTWRMPEGLL IAIAVMMRFLPTIKEHYRMICDSLKIRGIFTSRWMIIRHPLMFFEYILVPLLMNATRIAQ DLTIASMTKGVASKKRKTSYVTYRFGLVDYAAYGFMVIFVLALITGVTL >gi|304426198|gb|AEEM01000015.1| GENE 37 34643 - 35227 469 194 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1169 NR:ns ## KEGG: GALLO_1169 # Name: not_defined # Def: putative ABC transporter, permease protein # Organism: S.gallolyticus # Pathway: not_defined # 1 194 1 194 194 308 100.0 7e-83 MKTKDIITTGIYTALYFVFLCLGTLLSVLLAYSANMKYAPAFIALLAGTVYMLLIAKTKK FGCLILMSAVISVFFFMSGHFAFSFLPNLICGILADIIAKFGKYENKLYNLISYIVFSFG NLGPVIMMWVVRDAYIEHLVAIGKDTSYINEVMVNFDFSNVAWLSLTIIIGGLLGGLFGQ YMLKKHFNKAGMVE >gi|304426198|gb|AEEM01000015.1| GENE 38 35312 - 36976 1356 554 aa, chain - ## HITS:1 COG:SPy1790 KEGG:ns NR:ns ## COG: SPy1790 COG1132 # Protein_GI_number: 15675629 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pyogenes M1 GAS # 1 554 1 553 556 473 47.0 1e-133 MASKELSTKTLVKRLANLVKGLWLQYVLAVGGAVLGFLMTILIPSLVIRLAWQALEGQTP HFSFVVILFALGLMRGILRYIEHFFGHYVAFKTLYDFRCMVFAKLRRLAPTKLDQQDSGN MLKMIGEDIEAMEVFFAHTLPPVMTASLVTIILAVYYWSVSPVIAVISLLVYAILAIFLP RAQARQLQPLLQKQSQTRKAYMSHFSDSLHGMKELLQFGQIKSDLEHLNKESESVNAREK EVAQAQHLQASLSFLVIGLAIMLVAVLAISQANQGQISLVSATTIIVVFSTSFAPYLELS RLPLGFKRAMTAARQVFELLDEKEFDKSGQTFDETIDSIVLEDVSFAYENRNQSIFNHLS VAFENHKIIGLVGQSGSGKSTLMKLVMRWYDNTKGQILVNHKPLSTLAARDIQNRIVYIP QIPQVFSQSIRENLTLGNPDITDDMILEAAAKCRIKDKILSTKNGLDTLLNSEQTLFSAG ELQRLELTRALLKDADCYIFDEPTSNLDSLNEAAFLQVVREHCKGYVFLISHRLSTVAAS DVIYKVENEALTQI >gi|304426198|gb|AEEM01000015.1| GENE 39 36969 - 38744 1522 591 aa, chain - ## HITS:1 COG:SPy1791 KEGG:ns NR:ns ## COG: SPy1791 COG4988 # Protein_GI_number: 15675630 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Streptococcus pyogenes M1 GAS # 25 591 24 587 587 567 52.0 1e-161 MAENQQERISRERRKMLLSRLKSEVGPYKRDLYIAAVLSWIQFLMRILSFFLIAKSVEHL YKGEAISLITLICQLLILSAIGFAVSLLAKNYQGTASQYARNHLKGAFFEAFQNHGGEFD DKDFSVADIMNVASQGIDTLDTYFNHYLTISLRAYFNCATVLLLVAFIYPIGGLIFLVSL PFIPVSIILMQKRSKKIMNHYWATYMDVGNLFMDDLKGMNTLYTYDADERYEKTFVEKAE EFRQSTMELLKFQLQSVGYMDGVMYIGVGVSGFAAAVSLSHGHLSLFSLIFFVLIATEFF APIREMGYGMHLVMMNTKMADRIYTFLDSAAVDDSQENKASLPTDIKEIRFDNVSFSYDN TKILSNLSFTIPKGKIFAVAGESGRGKTTIAKLLQKQLSVSEGKIFFGQQDLADVSLDAV KESVMYVSPESYLFNGTIYENLALATDMSQAQLLTWLNQRHLMTFLQDLPEGLQTVVGEN GNLLSPGQRQQIICARALLAKRPIYIFDEMTSSIDSENEQLLYDYIKLTAQNAIVLVISH KMKQVLQAEQVLFIDSKRTISLGRPEALLTTNAEFKKLVSTQEELEAILHG >gi|304426198|gb|AEEM01000015.1| GENE 40 38954 - 41596 2919 880 aa, chain - ## HITS:1 COG:SP1652 KEGG:ns NR:ns ## COG: SP1652 COG0577 # Protein_GI_number: 15901487 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 880 24 924 924 850 50.0 0 MAKKTYWKDIRKSFGSSKGRFLSIMLLMMLGAFAFVGLKVTGPDMQATASQYLKKHNTMD LSVIASYGFSDDDKEELDSIKNADVEYGYLTDVTVKNTDDAIRVFSKSTSISTYELVSGR LPKSSDEIALASTMKDDYKVGDTISFTQSDEDGILKNTTYKVVGFVNSSEILSTTSLGSS TAGDGSLSNYAVVTESAFDTDTYTIARIRYDDLKTLNPFSESYKQKVADKQDELDDLLSD NAEQRLASLKSDAQAEVDANQEKVDSAKAQLAAQESALASLSAEQQAAAQSSIDQAQAEI TESESEIQEAQAKIDAMTEPTYTSYTRSTLPGGEGYQTYESSTSSISSIGNIFPVVLYVV AALVTFTTMTRFVDEERTNSGILKALGYSNSDVIKKFVIYGFVASMIGTVLGIVAGHYLL SRIIAQIVTSDTTLGETHLYFYWNYTAIALVLALISAVLPAFLIAKNELSEKPAQLLLPK PPVKGSKIFLERIGVIWRRLSFTHKVTARNIFRYKQRMLMTIFGVAGSVALLFAGLGIRS SLGNVIENQFTNLMPYDMIVVKNDDNSSSENQEVKDFMDSNKVSQYQSIYFTTLSETISG LTDKQTVSIMVSSGDDFGDFIHLKDASSGDSLTLSDDGIIISEKLASLYHVEAGDSFTLK DSDGKKHTVKVAAVAEMNVGHYLFMSQKVYQKIFGETPNDNAYLVTLKNDSSSNIEKLST KLLAMSGVSAVSQNSSLVKTVKSVVASLNGAMTILIVVSILLAVVILYNLTNINVAERIR ELSTIKVLGFYDKEVTMYIYRETISLSLIGIIVGLIGGKYLHQVIMGMIGSDSIMFGTTV GWDIYVIPIAVIVIILLALGWLVNHILKTVDMLEALKSVD >gi|304426198|gb|AEEM01000015.1| GENE 41 41607 - 42308 368 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 227 2 232 245 146 37 8e-34 MAYIEMKHSYKRYQTGDTEIIANNDINFAIEKGELVIILGSSGAGKSTVLNILGGMDNND EGQVIIDGVDIANYSQKELTTYRRNDVGFVFQFYNLVPNLTAKENVELASEIVVDARDAE QTLIDVGLGKRLNNFPAQLSGGEQQRVSIARAVAKNPKLLLCDEPTGALDYQTGKQVLKI LQDMSRQKGSTVIIVTHNSALAPIADRVIHMHDAKVSSIELNEHPQDIETLEY >gi|304426198|gb|AEEM01000015.1| GENE 42 42449 - 42997 541 182 aa, chain + ## HITS:1 COG:SPy1258 KEGG:ns NR:ns ## COG: SPy1258 COG1309 # Protein_GI_number: 15675217 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 179 1 179 180 199 60.0 2e-51 MKKRHTETENYLKQALAKLLLEKNFEEVTVSDLTRTAGINRGTFYLHYVDKYDMADQFKN DTLDDLFHILSDESIYTDTRAVLFRTLTYVKENFEFIYAISKSAYVDFPKTIKDFVYEFL LTVPEFKETITAYYDIPYQYALEVYLSSIESIISLWVANGGKESTEEITDIILKVAALEK MI >gi|304426198|gb|AEEM01000015.1| GENE 43 43330 - 43821 554 163 aa, chain - ## HITS:1 COG:SP1651 KEGG:ns NR:ns ## COG: SP1651 COG2077 # Protein_GI_number: 15901486 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Streptococcus pneumoniae TIGR4 # 1 154 10 163 172 231 66.0 6e-61 MTTFLGKPVTLVGQQLQIGETAPDFTLTTTDLAQKSLSDFAGKKKVISVIPSIDTGICST QTRTFNKELSDMEDTVVITVSADLPFAQARWCGVEGLERAVMMSDYYDNTFGKTYGLLMK EWHLLARAVLILDEDNKLVYAEYLENVNSEPNYQAAIEAVKAL >gi|304426198|gb|AEEM01000015.1| GENE 44 44046 - 44801 691 251 aa, chain - ## HITS:1 COG:SA0343 KEGG:ns NR:ns ## COG: SA0343 COG1878 # Protein_GI_number: 15926056 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Staphylococcus aureus N315 # 8 248 10 250 250 226 50.0 3e-59 MMSFNDVLSAVKSAKLVNLSHQIDENSPHFPLLPNLKKKDVFTLKDGFHVQEFSVVGQYG THIDAPIHFVAGGKWLDEIPLEDLLLPLYVIDKSDAVAANPNYELTKQDILAFEKYHGKI PPESFVAFRSDWSKRWPSQEALTNLDENGVQQTPGWSREALEFLIHERHVKAIGHETFDT DSGQAVANANGKLQQEYYVLEQGIYQVEVLTNLDKLPPTGALISIAYPNWKEATGSPVRA IAYIFENDVTD >gi|304426198|gb|AEEM01000015.1| GENE 45 44998 - 46278 1541 426 aa, chain - ## HITS:1 COG:lin0604 KEGG:ns NR:ns ## COG: lin0604 COG2873 # Protein_GI_number: 16799679 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Listeria innocua # 1 426 1 425 425 531 62.0 1e-151 MTRKYNFETLQLHAGQTVDPTTKSRAVPIYQTTSYVFEDAQEAEDLFGLKKTGNIYSRIG NPTVAVFEDRLAALEDGVGALATASGMAAITYTVLGLAHAGDHVVAATTLYGGTFNLLKE TLPRYGITTTFVDVDNLEEVEAAIQDNTKLVFIETLGNPLINIPDIEKVADIAHAHKIPL VADNTFGTPYLINVFSHGVDISVHSATKFIGGHGTTIAGVIVDSGKFDWEASGKFPQFVD EDPSYHNISYTRDIGAAAFITALRVQILRDTGAALSPFNAFLLLQGLETLSLRIERHVEN TKKIVDFLENHPKVEKVNYPSLPSSPYYELAQKYLPKGAGSIFTFHVKGGQDEARQVIDH LEIFSDLANVADAKSLVVHPATTTHQQLSEEDLLACGVTRNQIRISVGLENADDLIEDLR LALETI >gi|304426198|gb|AEEM01000015.1| GENE 46 46390 - 47022 612 210 aa, chain - ## HITS:1 COG:SA1894 KEGG:ns NR:ns ## COG: SA1894 COG0352 # Protein_GI_number: 15927666 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Staphylococcus aureus N315 # 2 210 3 212 213 216 49.0 3e-56 MDKEILQVYFICGTANCPEGKFLEILEAAFKSGVTCFQFREKGANALKGGEKVVLARKVK ELCRKYQIPLIINDDVDLALELDADGIHLGQDDLPITKARQLFPNKIIGLSVGSTIEYQR SAVELVDYIGVGPIFPTSSKNDAGEVIGLKGLNDVRDYDKEIPIVAIGGITFGDVAAIKQ SGADGVAVISAIAQSKQVEVDTQRLSSFFD >gi|304426198|gb|AEEM01000015.1| GENE 47 47015 - 47812 585 265 aa, chain - ## HITS:1 COG:SP0717 KEGG:ns NR:ns ## COG: SP0717 COG2145 # Protein_GI_number: 15900614 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Streptococcus pneumoniae TIGR4 # 1 261 1 260 260 309 59.0 3e-84 MTYLDDLRQNHPLTICLTNQVVKNFTANGLLSLGASPAMSEYQADLEDFLPKANGLLVNI GTLNDRSWQLYKDALDIAEKYDIPTVLDPVAAGAGKFRQQVALDLIEHHRISLLRGNAGE IAALIGERVASKGVDSAQVDDVGKLALRANQILQLPIVITGETDAIAVNEKVLLLHNGSS LMPLVTGTGCLLGAVLAAFIGLAKEKDLLACLEEALSAYNIAGELAEKKLSEPLPGSFQI AFLDALHQVTNTDIERLKKVEVYHG >gi|304426198|gb|AEEM01000015.1| GENE 48 47813 - 48610 864 265 aa, chain - ## HITS:1 COG:SP0726 KEGG:ns NR:ns ## COG: SP0726 COG0351 # Protein_GI_number: 15900623 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 263 1 262 263 325 66.0 6e-89 MSKLQVALTIAGTDPSGGAGIMADLKSFQARGVYGMAVVTSVVAQNTQGVQAICNLDQSI LDAQLKSVFSDIPPHAIKTGMLAEVETIERVSQYLNTIDCPYVLDPVMVATSGDRLISLE AVQALKEKLLPLATIITPNLPEAEVLYGQELKDEAAILQAGKAIQADYGVKNVVIKGGHL ENEAKDFLFLENGQVVTFSSERIPTKHTHGTGCTYAAVITAELAKGQSVEKAVATAKHFI TEAIKTAPELGHGNGPVNHVSYKGD >gi|304426198|gb|AEEM01000015.1| GENE 49 48603 - 49289 645 228 aa, chain - ## HITS:1 COG:SA1897 KEGG:ns NR:ns ## COG: SA1897 COG0819 # Protein_GI_number: 15927669 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Staphylococcus aureus N315 # 5 221 6 221 229 184 44.0 1e-46 MIVNELKKRSEIFIEKIVEDDFIQGMITENLPAEAICHYLKADSVYLDKFADIYAQLFAK VPDKASKEFFLGQIDFIFKHEVGAHHFLAQVVGQDYEEIIADRAWYPSADHYIKHMYYQL NRDNLVYILAAMLPCPWIYQQVAKRVLASGKISDDNPFKNWLDFYGQEGVADACLTVYFD LVAKYSERLSADEQKEVIRMFLESCQHERQFFQMAVEQEEWPEEVRNV >gi|304426198|gb|AEEM01000015.1| GENE 50 49276 - 49929 366 217 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1182 NR:ns ## KEGG: GALLO_1182 # Name: not_defined # Def: putative HAD-superfamily hydrolase / phosphatase # Organism: S.gallolyticus # Pathway: not_defined # 1 217 1 217 217 413 100.0 1e-114 MKTIIFFDLDGVIFDSYGLWDKAVEDFLSTVNLTYTTEMKQKLWQLNMLEAEHYLRELFG KQGQAYQPEILKAILLQLYETVDIMENAKCVLAALVRRGCKLYAVTSNYYDLAEIGLKSQ QLLPYFTTLYSCLSMGYADKEQAFFQEILEQERLNANQIIYVEDSLANLKEARKLGVTGI YLANSDNPQAGQNDTFVTIDSLDELTKIVKEMNNDCK >gi|304426198|gb|AEEM01000015.1| GENE 51 49933 - 50649 782 238 aa, chain - ## HITS:1 COG:TM1293 KEGG:ns NR:ns ## COG: TM1293 COG0500 # Protein_GI_number: 15644048 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Thermotoga maritima # 7 238 4 206 207 85 30.0 7e-17 MTSKAKMFDGYANAYDQWFMKNENVFASELKLLHRTLEPLEKKTILSIGCGSGLFESALK REYGIHVQYGVEPSTDMAKIARKRGMTVFIGDAETSELAENSYDVIYLNGCSSYIKNLSA AYQNCHRALKKGGHLILLDVPVESTYGILYKFAAHVGSYEKELFEQIAPTFPYPIELVSS AIFHSPLEKENILREELGMTNIRYFQTLTAQPIYTNDFVEEPIEGYDKGGYVALVAEK >gi|304426198|gb|AEEM01000015.1| GENE 52 50649 - 51227 649 192 aa, chain - ## HITS:1 COG:SP0723 KEGG:ns NR:ns ## COG: SP0723 COG4732 # Protein_GI_number: 15900620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 183 7 169 174 130 48.0 2e-30 MTFNRVHRLTILAIMVALDVLLTPIFRIEGMAFMSSVVNIIAGTFMTPLYAAAMALIVAV IRILTQAGVASVAPLAILGAVPGAVLAAYFYRLTKKPIMSWVGEFLGTGIIGSILSAPVM NWYWTMTANGDNELLAKASAAQSLFLFMPRFICATLIGGALGLTVVHGLRYSAYFVNLEN LYLKPSKKLGEK >gi|304426198|gb|AEEM01000015.1| GENE 53 51646 - 52509 882 287 aa, chain + ## HITS:1 COG:SP1115 KEGG:ns NR:ns ## COG: SP1115 COG1396 # Protein_GI_number: 15900982 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 284 1 287 287 139 30.0 6e-33 MKYLGQAFKELREARHISLAKASGGQFSPSMLSKFESGKNDLSAQKLFIALENTHIEINE FLYLTRGFLKSDLVELQEKIYACEEKFDSAGLQKLYESELKKQQDQETGMIYALIVKAHL KAFDESVELTAKEETFLYNYLFDTEIWGNYELTLLSICSTLLTPDLFTMYARECLRKTDF LGEIKENRKIIHNMLLNGFLLCIDENDFINANYFDKQIQKHFYQESEAYYRIVYLWAKGL FSYKQGQQQAGKKQMEEAIHVLRILECHSAADYYTSGMQDAIKSNDD >gi|304426198|gb|AEEM01000015.1| GENE 54 52925 - 54160 935 411 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148990506|ref|ZP_01821647.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP6-BS73] # 1 392 1 397 415 364 45 2e-99 MRLFFKNKIYHLLTVSRFLNTIGSSLYNIVFVVYAATVFHSKIMVSIANVTMVVPTLFTI WIGIKADQTQSKKKWIVITGFIQAIIFTLLAFIINEPSLLAFSFICLFNILSDVLSDFSN GLRMPIIQKYVHQEDLIEAYSFTQFISYICSFSGQALGIWLLTVSKQNFSLVALINALSF LLSVLVVLLIKDNANYDVLPNGKKQSLKEQFSALYHNVMLIFNEASTADFSRLLLSILCL NMLGGSLNAIYNIWLLTAKIGHLSYSQALLLIEFILVGGILIGSLTPHDYFSKKSVRELL KINAVIFFLVGLSNLIHLPLIFGVLPLAFASYLVGKVNPKINSLLLSKLPANTLAQTNNF LSFLFTLSLPVGTVLFSSLSSWNITFTWLTFLIVAVIIFRFSTPSKTINTD >gi|304426198|gb|AEEM01000015.1| GENE 55 54219 - 56534 2607 771 aa, chain - ## HITS:1 COG:SPy1267 KEGG:ns NR:ns ## COG: SPy1267 COG0210 # Protein_GI_number: 15675225 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 771 1 772 772 1254 81.0 0 MNPLLNGMNDKQVEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITF TNKAAREMRERAMALNPATADTLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM KRILKNLNLDPKKWNERAILGTISNAKNDLLDEVAYENQAGDMYTQIVAKCYKAYQEELR RSEAMDFDDLIMLTLRLFDQNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANAVINNNRN RRPKKLWTQNADGEQIVYYRARDEREEAVFIASTIDNIVREEGKNFKDFAVLYRTNAQSR TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNVIANTADNISYERIVNEPKRGVGPG TLEKIRDFANMQNMSLLDASANIMLSGVKGKAAQAVWDLANLLMKLRDDLDQMTVTELVE AVLDKTGYLDALRVQNTLESQARIENIEEFLTVTKNFDDNQEDAPEDESGIDKLSRFLND LALIADTDDGDAETAEVTLMTLHAAKGLEFPIVFLIGMEEGVFPLSRAAEDQDELEEERR LAYVGITRAEQLLFVTNANTRTLFGKTSYNRPSRFIREIDDELLQYQGLARPANSSFGVR YSNSSDEQLTFGQGMSLQQALQARKAKVQPTSSRGAQPFSKSGKAVPVGQSASASKEAVD WQIGDIAHHKKWGDGTVLAVTGSGKTQELKINFPEVGLKKLLASVAPIEKK >gi|304426198|gb|AEEM01000015.1| GENE 56 56673 - 57245 453 190 aa, chain - ## HITS:1 COG:SP1467 KEGG:ns NR:ns ## COG: SP1467 COG0311 # Protein_GI_number: 15901317 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 4 190 3 192 193 202 52.0 4e-52 MVLIGILALQGDFEEHCQKVRALGEQAIEIRQREDLQAPLDGIILPGGESTVQGKLLQDL KLLKPLQDKIAAGLPVFATCAGLILLAEKIENQQENYLATLPVTVRRNAYGRQLGSFYTE LDFSGLGQLPATFIRAPYISKVSKGVDILAEKDGKIVAVRYQNQLGLAFHPEVDSDDSIH AYFLKICQTK >gi|304426198|gb|AEEM01000015.1| GENE 57 57257 - 58069 1164 270 aa, chain - ## HITS:1 COG:SP1468 KEGG:ns NR:ns ## COG: SP1468 COG0214 # Protein_GI_number: 15901318 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 269 22 290 291 401 84.0 1e-112 MDVTTPEQAKIAEAAGACAVMALERIPADIRAAGGVSRMSDPKMIKEIQEAVSIPVMAKV RIGHFVEAQILEAIEIDYIDESEVLSPADDRYHIDKTSFEVPFVCGAKNLGEALRRISEG ASMIRSKGEPGTGDVIQAVRHLRRMNQEIVRLQSLRDDELYHAAKELQVPYELVKEVHET GKLPVVLFAAGGVATPADAALMMHLGAEGVFVGSGIFKSGDPEKRARAIVQAVTNYQDKA LLAELSENLGEAMVGINEDEIQLLMAERGI >gi|304426198|gb|AEEM01000015.1| GENE 58 58237 - 59637 980 466 aa, chain + ## HITS:1 COG:BS_ydeL KEGG:ns NR:ns ## COG: BS_ydeL COG1167 # Protein_GI_number: 16077591 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 2 461 7 457 463 304 38.0 3e-82 MLTYTLDNHGKIPLYEQLYRAIKIDITNGTLKANDKLPSKRSLAKHLGISIVTVETSYQQ LKAEGYIYSQAKKGFFVANIKPHRPPVKKTVRLVSTPASMPDETKPTLNLSNNQTNSETF PFATWSKLVRQVLNNCQNELVTPSPSKGVPLLRQAIANHLNDYRGMAVDPRQIIIGAGTE YLYTLLIQLLGLDRTVALEEPSYPKITEIYRQFNINPIYIPMENDGLDTAQLKKSTADTV HLSPSHQFPTGAILSISKRYELLSWASQGNRYIIEDDYDSEFRFQGLPIPSLQEIDSSGK VIYINTFSKSLASTLRISYMILPPQLLDTFEEKLSFYNNTVSNLEQYTLAYFIQEGYFEK HLNRMRLFYQKKRDELIHRLMTSPLNKRISIHEQESGLHFILHIQSDLSEQTICQLAKKH GLQMTPLSRYYRCQNTYSDKDFIVNYANITSADIDKIINILLQIVP >gi|304426198|gb|AEEM01000015.1| GENE 59 60138 - 61466 1324 442 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 8 441 10 443 456 514 57 1e-144 MLDFFTLLDDIVWGAPLLILLVGTGVYLTVRLGLLQVIKLPKAFKLIFADDKGQGDISSF AALATALAATVGTGNIVGVATAIKAGGPGALFWMWMAAFFGMATKYSEGLLAIKYRTKDD NGEISGGPMYYILNGMGKRWKPLAVFFAVAGVLVAYFGIGTFSQVNSITSSLENSFGLAP QIVSVVIAVLVAIIIFGGIQSISKVAEKVVPFMAIIYIVATLAVIFAHANQILPAFGEIF SGAFTGTAAVGGFAGAVVKDAIQKGIARGVFSNESGLGSAPIAAAAAKTEEPVEQGLISM TGTFIDTIIICTLTGLSIIVTGKWTVSGLEGAPLTQAAFSSIFGTPGAIALTFCLVLFAF TTILGWSYYGERCFEFLFGTKHIKLYRSIFVVMVALGGFLKLELIWVIADIVNGLMALPN LIALLALSPVIIHETKRYFAKK >gi|304426198|gb|AEEM01000015.1| GENE 60 61512 - 61880 487 122 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1192 NR:ns ## KEGG: GALLO_1192 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 122 1 122 122 177 100.0 1e-43 MKNSDFITLITYTVSTLVLALGMCMFTLPDWHLQNIGLPVAIVGLLLEVISWVIQRRLAG KGAPNVNPKLVGKVVYSVVAALVFGGGFALISSGNFVIGFVLSLVGLVLLIGIIPVVVGL KN >gi|304426198|gb|AEEM01000015.1| GENE 61 61910 - 62179 374 89 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1193 NR:ns ## KEGG: GALLO_1193 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 89 1 89 89 95 100.0 4e-19 MSITEKNEKIAEKVGATHKTIEKTVVGAYKATETGAVNGFNKVSDKFIEKFFTKDGESVE EAKKRLAASAEKSKTRSKDINEKAKSHKY >gi|304426198|gb|AEEM01000015.1| GENE 62 62327 - 62806 513 159 aa, chain - ## HITS:1 COG:L153086 KEGG:ns NR:ns ## COG: L153086 COG1959 # Protein_GI_number: 15672540 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Lactococcus lactis # 1 117 1 127 156 65 35.0 3e-11 MKLNKSFEQAVYVLTMLALQENHTPVKSHVLSDILEVSDSYLKKILVKLTRAGLIQSNAS KVGGYQLAQSVTTITLKDVFFALDLQANVIEFKHMAHHIYDDTSHVKQVENKVQQTLEKG LFAFYHELDTLTIADLLQEEAYENGAINWSNKVKNHLNK >gi|304426198|gb|AEEM01000015.1| GENE 63 62806 - 63393 558 195 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1195 NR:ns ## KEGG: GALLO_1195 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 5 195 1 191 191 347 100.0 2e-94 MEHVMTTIVLLGGNGYIGRNVTKNWLKKDSSAEFYVLSRSGKNELKDSRIKNIAVDVTSV GAVEAVLPEKIDYIIDFIGRPEKDVDLFKKVNNLPAQVMLRVAEKHRVKAMGFIGGVLGP KSFVNGKKLIIESLEKSDIPLAVVEPTIVYGNGRADTLAKMVPILKVVGVLVKMLKPVHV DDVANELITQLIKRS >gi|304426198|gb|AEEM01000015.1| GENE 64 63512 - 63898 324 128 aa, chain - ## HITS:1 COG:lin0440 KEGG:ns NR:ns ## COG: lin0440 COG0561 # Protein_GI_number: 16799517 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 4 128 142 267 270 97 33.0 6e-21 MSEMPQEAINKITMKVPMSAEEKVTNDFRREFPDLVPMASGFGALDVVLPNIDKAWGLKQ IMTLFDISPDELMAFGDGDNDLAMLSLAYHSYAMENATERVKETARFIAPANTKSGVFQV IEAYLKEN >gi|304426198|gb|AEEM01000015.1| GENE 65 63961 - 64332 419 123 aa, chain - ## HITS:1 COG:lin0440 KEGG:ns NR:ns ## COG: lin0440 COG0561 # Protein_GI_number: 16799517 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 118 1 118 270 86 37.0 9e-18 MIKMIAVDMDGTFLDENGRYDIERFEKILEELEKREILFVVATGNQISRMRHIFGEQSDR LAYVVGNGSHVIVKNETKILKNLSEKQLEHLFAYYEHHFDDYHIVVSSPEHSYMTKGAFH AIT >gi|304426198|gb|AEEM01000015.1| GENE 66 64445 - 67231 2973 928 aa, chain - ## HITS:1 COG:L88643 KEGG:ns NR:ns ## COG: L88643 COG5263 # Protein_GI_number: 15674205 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Lactococcus lactis # 681 922 259 477 483 65 28.0 4e-10 MEIIMKQKGHGTIKKSKAYGAIGTLLLSGALIAALGTTNVSADETSVDTAATIETVVESS AVQGESDNETVEVESVDSDKTATVNDEQEVVSEYNQADVQEQTTTDENVESETAKDVSSE SSQATTDTKVSDSEMAEQTEDEITDTQDSVQTDEQLATVEGSADNLTVERGATGNATNEV TSVSLASNGFNLQYNQAIASGAKIMFAVWSDVNGQDDLVWYTADSNGKATAKYTGSYGKY YVHTYQNLNGKMTGLNGTTIDVPKPSAKVSITKASATTYKVIVTDVPVYITSVTLPTWTE NKGQDDIIWYKTTKDSTTTYSAAISVAEHNLESGKYNVHVYGTSAVTNSLTGLLGTSFQG DYAFGDVAVSASLGQKGINITIPSDVSKAITVYHAVWSAKNDQDDIVWYKVPSNGELTAK YTGDYGKYLIHTYGVVNGRMIGLNTTSIDVVNPSVSVDLTKVSETSVKVTISDVPAYMTS IVLPTWTENKGQDDIKWYQATKQSDGSYTYTFYAKNHNFESGHYNVHVYGTSAVTNSFIG LTATSGIDLTFSEKLTNPTVTVQNHNAANGTLQVVIAETETSKDIASVAVAAWSQAEQKN IHWYTTSSVVNGKVVVTVDEKYHHNISGDYTVHVYVKTTSGDTVGYALGSYALTKTQSTA KATTSYKGTGVYSVTISGVYSSGTVKYAVWSDTNGQDDIKWYDATTSGTTATGLINVANH SGTGTYHLHAYQSDNGQMYFLTSTDFTVKQTNYNTPYYNQRDGRWANTRYGYYTMASTGC VPTSLAMVFSALTNTEVLPTTVASYLYNNTVEFNRGTEGTTGNGILVASRQWGLTPTVIN SSAALTSALKEGHHVVAAVQQDKFSPWGYGTSHEIVLKGYSNGNTYVSDPYNSANNGWYP IASLWNEQSTQSVDTRGLGNPFVKITDI >gi|304426198|gb|AEEM01000015.1| GENE 67 67354 - 67926 624 190 aa, chain - ## HITS:1 COG:SA2165 KEGG:ns NR:ns ## COG: SA2165 COG1309 # Protein_GI_number: 15927955 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Staphylococcus aureus N315 # 7 172 3 177 207 61 25.0 1e-09 MILTGNEDLRVIKTIEGIKSAFEELICQKDFEKITVKELSEKARINKKTFYHYYADLYDL LAEMQVELSSGFLERVQHYRLPDDLSEVTREFFLYSSEQGEAYEKITCSGSYEYVRNKMI GQVNDVTWGKSSVYQKLSDFDKKLIVNYANTVSLEIYKQWIASGKVIALNEIINRAIILT SSGIQGFFEK >gi|304426198|gb|AEEM01000015.1| GENE 68 68007 - 68447 376 146 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1199 NR:ns ## KEGG: GALLO_1199 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 146 1 146 146 272 100.0 3e-72 MNTEKFFDKMALKELVDTFSSLADIKDTKIQAQLFVEDAKLESFNGDFHSVQNGREEIET ACASFLALFDTVYHLNGQQVVDINETGDAATGTAYCHVVLIGENEEGKRVQTTQGVRYND EYIKIDGEWKIANRTSHFVYTDTKEM >gi|304426198|gb|AEEM01000015.1| GENE 69 68478 - 69959 1463 493 aa, chain - ## HITS:1 COG:lin0980 KEGG:ns NR:ns ## COG: lin0980 COG0477 # Protein_GI_number: 16800049 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 11 474 1 467 491 210 33.0 5e-54 MTILNRKGVYMTRKQIGLATVGLLLANFMGGLDTTLLNVALSQIVSDMHAVNEVGLLTSI LLFTIAITTVLWGKIAEKIGNKKSFIIATIIFVVASAIGGLSSNIWLLILARAFMGIGIG GMVSIPFIIYIDLYPELTARATALGWVTAFYAVATILGPIIGGVLVDTFGWRSVFFINVP FGILSILLLQINYKENQISSVKSKVDFLGSGLLIIALSLLLYTITSISSLSLGMIVGLLV IVAILLFVFWRVEHHAIDPILPPVLVTNWLYIAKSLLMTLVYGLTMAYSIYAPMWAQNIL HTNATLAGGTQILSSILLIVATRLTPRLFERFSFKQIIQIGFSFVLLSAVIMALLPSSSP YWLLVITGGLQGLGQGMIFPPAQVAFQADVDESIVGVATTFSLLIRTLGQTLVTSIYGVI YAQTIANGISASHGEITLSAMNNLGTLDVSSVSQSVLTQMEAIAYHGFHIIFVVALILVA IGTVMNRFSWQKD >gi|304426198|gb|AEEM01000015.1| GENE 70 70108 - 71613 1739 501 aa, chain - ## HITS:1 COG:CAC1405 KEGG:ns NR:ns ## COG: CAC1405 COG2723 # Protein_GI_number: 15894684 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 9 491 7 470 473 549 56.0 1e-156 MTKAFPKNFLWGGAIAANQAEGAYNEDGRGLVATDVTTGGSVNAPRYMTYIDKDGKPGKA PAMGHNGKIPEGAKYAVLDTEHYPNHVAVDFYHRYKEDIKLFAEMGYSVFRLSISWARIF PNGDDKEPNQAGLDFYRSVFEECRKYNIEPLVSIWHFDTPLALEEKYGGWKNRKLIDFYV RYCEVIFTEYKDLVKYWLTFNEINNTTMFLDMFGAKASDADYQDGYQILHHQFVASAKAV QLGHAINPDFMIGNMICGITFYPGTCDPADILANEHKWESGIYYCGDVQAKGKYGTYAKR LWKEHNVELDITAEDLEDLKRGTVDMYTFSYYMSNNVTTHTGVEEVAGNFSTGAKNPYLT YSDWGWAHDPVGLQYYLEKIYDRYEIPLMVVENGLGAFDTVEDDGSIHDDYRIDYHRAHI NAMADAIDNGVDLIGYTTWGCIDIVSAGTGEIRKRYGFIYVDMDDAGNGTLNRTPKDSFY WYKDVLATNGQKAIEEAIQNH >gi|304426198|gb|AEEM01000015.1| GENE 71 71705 - 72361 525 218 aa, chain - ## HITS:1 COG:SP1450 KEGG:ns NR:ns ## COG: SP1450 COG2755 # Protein_GI_number: 15901300 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Streptococcus pneumoniae TIGR4 # 13 217 3 210 211 140 37.0 2e-33 MTDFQELYHKADVQEYRQYILADQQHQLWEKYAALNKAVSHPNIVFAGDSITEYFPIHEL LTSTVPLYNRGVHGIDSLQFLEHLSSQILDLAPSKVFLLIGVNDLKKRTPEEVCQTIQSI ITKIHQQLPETQIFLLSVFPMNESPEFVRTPSLRNNQSISLLNDNLSRLAGDKVCWFDVH DLLCDETGQLKRDWTVDGLHLTVAGYRVIADAIQPYLV >gi|304426198|gb|AEEM01000015.1| GENE 72 72358 - 73185 682 275 aa, chain - ## HITS:1 COG:SP1451 KEGG:ns NR:ns ## COG: SP1451 COG0561 # Protein_GI_number: 15901301 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 270 2 271 275 184 34.0 2e-46 MIKLIASDMDGTFLNPQGSYDKRRFQDLLRQLTKRNILFVVASGNRMERLRQIFAEVSDN IDYVAENGALVIDKGNLLARQTMPNHLVDAVVVFFADKLRSYRVILSGVEASYVLQGTSF EFGTAAVSQDELRQFFSNLVYLEDLTKRPKDPIVKITMMVDSDDVDEVTQQFNQEFHGDL RAVSSGYGAVDIIQSSVHKAWGLQVLMAKYKIKPEEVAAFGDSGNDKELLNLAKYSFAMA NATQDIKNVACYQIASNVEDAVLTTIEKILSGEIK >gi|304426198|gb|AEEM01000015.1| GENE 73 73182 - 74000 634 272 aa, chain - ## HITS:1 COG:lin0440 KEGG:ns NR:ns ## COG: lin0440 COG0561 # Protein_GI_number: 16799517 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 3 268 2 266 270 182 38.0 4e-46 MTIKVIATDMDGTFLTNNKTYDKVLFNRLFDKFMADDIKFVVASGNQYRQIIQQFPKHKH QMTFVAENGGHIIENGRTLQEAFETEEAISALVNYIEKYYPDTVINLAGKDSSYLPAATP KKVKDLLSYYLPVLTYVDNLHPIPDDHFFKVTLLVRDDLTFKVRDDINTLFADYQLTATS SGFGCIDVIPSHVHKGTGLDFLLNHWGYTPENLMVFGDGGNDIEMLTLAKYSFAMANAPQ EIKAVASYQAPSNQENGVLQVLSNHFLKGIEL >gi|304426198|gb|AEEM01000015.1| GENE 74 74137 - 74691 545 184 aa, chain - ## HITS:1 COG:lin0669 KEGG:ns NR:ns ## COG: lin0669 COG0110 # Protein_GI_number: 16799744 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Listeria innocua # 2 180 3 183 187 156 48.0 2e-38 MTELEKLQAGLPYCFTDSAIEAIKKEALRKCQALNAIDILNTEERTAAIKDLFGTTGENV SVFPNFNCDNGKNIHVGEQFLMNYNGIILDVAEVRIGHHVMIGPNTMITTVNQQGRRDNI GIAKPVTIGNDVWIGGNVTILPGVTIGNNVVVAAGAVVTKNIPDNCVVAGVPAKMIKTID NDID >gi|304426198|gb|AEEM01000015.1| GENE 75 74688 - 75452 730 254 aa, chain - ## HITS:1 COG:BH3842 KEGG:ns NR:ns ## COG: BH3842 COG4753 # Protein_GI_number: 15616404 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 37 241 323 516 530 82 28.0 6e-16 MPDAVTRKQIDYQAFLNRESQKRHHRYDEELQQYSYLKNGDLENAIKATKQMLRSDLTGH LSENPVRNYQYLFVASVTLATRFAIQGGLDEEVAFNTSDLYIQKVDKLDNVPDIFDLQVE MFTSFTKLVRQSKLDQAQSLPILRCIEYIDLHLHETITLADLAKHTGYSSNYISQLFKER MNQSVKSYIQAQKIAVAKNMLLESDYSLLEISETLSFSSQSYFTKVFKKMTGEKPLEYRA SHLANAIHTKGAQK >gi|304426198|gb|AEEM01000015.1| GENE 76 75638 - 76477 1000 279 aa, chain + ## HITS:1 COG:L172964 KEGG:ns NR:ns ## COG: L172964 COG1028 # Protein_GI_number: 15673511 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Lactococcus lactis # 3 278 5 276 281 203 44.0 3e-52 MTKTWFITGTSTGFGKELARLLAQKDDVNLVATARKPEQLSYLDEFDHGQILKLKLDVTN QEEIQKAVKATLDTFGSIDVLVNNAGIGYFGTFEESNRETVQYMFDVNVWGLVDMTRAVL PTMRKQNEGVIINFSSIGGLYSFPTLSFYHGTKYAVEGLSESLAKEVAHKNIQVLIIEPS GFRTDWAGRSSDKALPSIEDYQQFTDFITTNENGAGHEAGDPIKAAEIIYDQVTNNPQLP LRLPLGAFATDTAINKYSKQLAEFKELHDLSASADVPEN >gi|304426198|gb|AEEM01000015.1| GENE 77 76523 - 77614 719 363 aa, chain - ## HITS:1 COG:L176316 KEGG:ns NR:ns ## COG: L176316 COG3589 # Protein_GI_number: 15672155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 359 1 359 364 357 45.0 2e-98 MGELGISIYPSKSNLTEMKDYIAQAAEIGYQRIFTSMLEVADNPSETIGRFKEIIDYGNQ LGMKTSLDVNPRLFAKLGISYQDLQFFSDLGIWSIRLDEGFTGLEEARMVMNPFGILIEL NISRGQHYIDMVMDFGADKNRIIGSHNFYPQTYTGLDFDYFVQTAGQYKSHHLRTAAFVD SMNGSVGPWPVSNLMVSTEIQRQLPITEQVQLLKMTDVIDDIIISSSFLPKEELAAVYHV FYSSVPMLSVHLAKNVTEVEKDVIVTPLHMYRGDYSGYMIRSSETRIAYKASNFPTHDTQ SLKKGDITICNNAAGQYKGELQIVLKDRPNDGSFNLVGRIKQNNLPILDLLKPWQQFKLQ ISS >gi|304426198|gb|AEEM01000015.1| GENE 78 77704 - 79029 1801 441 aa, chain - ## HITS:1 COG:SP0310 KEGG:ns NR:ns ## COG: SP0310 COG1455 # Protein_GI_number: 15900243 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 1 437 7 445 448 453 56.0 1e-127 MFEFLEKYLMGPMGKVSTWRPVRAIVAAGMASIPFTIVGSMFLVLSIIPQAFPIPALTTL WANSVDKIAPLYLQAYNCTMGILSLYFAIVIGYEYTKIFAEEDDLNVDPVYGALLSVFAF FLTIPELLVSNGAFDYLNVDGATINGWTIGGNSLDRLSTSGMFTAILMSILAVQLYKTCI KRNWVVKMPEAVPEGVSRSFSALIPAGVVAIVVLVINGIFVVLGTDIYNVVAIPFSFVKN IANSWLGIVVIYLLVHALWIVGIHGANIVMGLVNPILLANMAENVDGAHIAYAGEFTNSY VTIGGSGAMLLACVWLAFAAKSSQLKMLGRAAMGPAIFNINEPLIFGLPVVYNPTLALPF MLAPIVSATIGYWSVKIGFAAVSIIQTPWPTPIGLGAYVGSGGSVGALLTALVCAAAAFL VWFPFLKMYDNQLLKEEGVEA >gi|304426198|gb|AEEM01000015.1| GENE 79 79070 - 79582 487 170 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1210 NR:ns ## KEGG: GALLO_1210 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 170 2 171 171 280 99.0 2e-74 MAALTEQEKKKLDETRRENGIKNMYYTRYFLIRYVVAFFFFVNLYWILMFFSTDNVSFIV IPFFMAVFGAICMWEQSRMYSREQKPAVKTKLYFQLIIAVNIVLILATLFNQYHYFYPFL SESTTTQIFLIVMLLLGILMASWMLVKLGRINHNSDKQYYRIQQYLASLN >gi|304426198|gb|AEEM01000015.1| GENE 80 79600 - 79914 458 104 aa, chain - ## HITS:1 COG:SP0308 KEGG:ns NR:ns ## COG: SP0308 COG1447 # Protein_GI_number: 15900241 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 104 104 123 76.0 1e-28 MNPEELQVAAFEIILNSGNARTMVHEAFDAMREGNYDLAEQKLQESNDELLKAHQAQTNL LQEYAGGKEIKIEIIMVHAQDHLMTTMTLREVALEMLELYKKVN >gi|304426198|gb|AEEM01000015.1| GENE 81 79922 - 81910 1869 662 aa, chain - ## HITS:1 COG:SP0306 KEGG:ns NR:ns ## COG: SP0306 COG3711 # Protein_GI_number: 15900239 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pneumoniae TIGR4 # 1 490 3 492 493 439 48.0 1e-123 MLNKKEKQIIQYLMKDRDKFVTSKELAAHLNCSDRTIRTYYKTLVEKLDDYSGIDLISKQ GYGYKLDVLDDDALADFLEENHINDHHFDYQSITDINDRYNYLLNKLLFEQNEIYFDDLV DELYVSRSTLSSDFKKIRQKFKPYHLKIESKANKGVYVTGSERDKRRFIMDYFISSGFID TMHSYVDNELLNQRISFEELTIIVLDECREGGLKLSDFVIQNLVIHIALAIRRITEGFKI SKLEEEELKLRELPERQIADNILKRVSVSTGIDFPVEEVDYITLHLISKSHGNARYVSES MQEQMRQELIDSIEKINPEVKNDFQLIEGLLAHLSTMLIRLEGKVVLENPLTTEIQANYQ EMYQLAEQVITTMPTFQSFSLTPNEIAYIALHFMAAKERYKEQRKYNVLVICATGYGSAQ MLKSRIENELGNLISITDVIGYYEINDEKLKGIDFIVSSIDLSNLIFNIPVFTVSVFLTD EELQEIKHGISHLNTSTSLRKMEDETSELSVREVFDDYFSKEAFFILSNVSKDEVLRKLV KSISKHENDQFEKRMLDMMKQREAMSSIIFGEHIAVPHPMKAVGSKHHFAVALIQDELLW DDQYPSIKIVFLMSMSIHENDGLPELTSAIVDLVDEPDLQEQMLACQSFEEFRTLFFKIK ER >gi|304426198|gb|AEEM01000015.1| GENE 82 81959 - 82276 392 105 aa, chain - ## HITS:1 COG:SP0305 KEGG:ns NR:ns ## COG: SP0305 COG1440 # Protein_GI_number: 15900238 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 4 105 3 104 104 119 65.0 1e-27 MAKKALIICAGGMSSSMIAKKTMTLLQEQGNDIEMDAVGVPEGQKRIEADKYDLYLVSPQ TKMNFKQLADAAAKTNKPIVQIPPQAYIPIPMGIEKMAVLVKENI >gi|304426198|gb|AEEM01000015.1| GENE 83 82530 - 82859 331 109 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1214 NR:ns ## KEGG: GALLO_1214 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 33 109 1 77 77 140 98.0 1e-32 MNWIILAFVIIIAGVWVFSSRYQKEYYAQGEQMGGPYLIQFKDVDILPELLSNRKLRETI DVIHADSNGKNYRVYSKINDKKLQQLIVKELGLTTNQVQVTYIKLYTFV >gi|304426198|gb|AEEM01000015.1| GENE 84 82875 - 83201 319 108 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1215 NR:ns ## KEGG: GALLO_1215 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 108 1 108 108 193 99.0 1e-48 MVGIIVTIFIILLIAAVVQAFRAKIWVTKTFGYNYVITMTNGGKLPDLSQNTKLKNNVRV VGKSEQSCSVQSRLNDTELKTLLMKEYHLDSTEIHVQTAQLSGALGMI >gi|304426198|gb|AEEM01000015.1| GENE 85 83395 - 83634 305 79 aa, chain - ## HITS:1 COG:SP0304 KEGG:ns NR:ns ## COG: SP0304 COG4095 # Protein_GI_number: 15900237 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 79 1 79 79 79 64.0 2e-15 MIGLIAASLTTLGFVPQVVKVLKTKDTESISLGMYSMSVTGMLLWLAHGISISDIALIAA NSISATLAGTILICKLIYK >gi|304426198|gb|AEEM01000015.1| GENE 86 83709 - 85142 1546 477 aa, chain - ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 1 477 1 477 478 862 85.0 0 MSKLPENFLWGGAVAAHQLEGGWQEGGKGLSVADVMTAGRHGVAREITDGVIEGKYYPNH EAIDFYHHYKEDIALFAEMGFKCFRTSIAWTRIFPNGDELEPNEAGLQFYDDLFDECLKY GIEPVVTLSHFELPFHLVKEYGGFTNRKVIDFFVRFAETCFRRYKDKVKYWMTFNEINNQ ANYQEDFAPFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKIGHEINPDFQIGCMIAM CPIYPATCNPKDILMAQKAMEKRYYFADVHVHGYYPNHILKYWQRKEIKVDVTEEDLADL TAGTVDYIGFSYYMSFAIDAHRDNNPHFDYLETEDLVRNPYVKASEWDWQIDPEGLRYSL NWFTDMYHLPLFIVENGFGAIDQVEADGMVHDDYRIAYLGAHIKEMIKAVDEDGVDLIGY TPWGCIDLVSAGTGEMRKRYGFIYVDKDDDGNGTYKRSPKLSFDWYKKVIASNGEDV >gi|304426198|gb|AEEM01000015.1| GENE 87 85242 - 86813 1337 523 aa, chain - ## HITS:1 COG:CAC0033 KEGG:ns NR:ns ## COG: CAC0033 COG0661 # Protein_GI_number: 15893331 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Clostridium acetobutylicum # 2 477 4 478 532 285 33.0 2e-76 MSNKRLREIIGAFSSVGLTTLKEKGKTIEDKSTPRKLRLAFEKLGPSFVKIGQILSTRSD LFPEAYIRELSKLQSDVLPLPQEVVMEAIAAELPVPISEVFAGISSEPLASGSVAQTHRA TLLNGKEVVVKIQRPHLPEIIEEDLELLIGLSRRIPKAMLPMVNLSEVLQQLKDSLTKEI DFRNEAQAMLTFAELNQSIKCIAIPEVFDEYTTSRMVVEEYISGIPINHYEELIKAGYDL EDIGKKLMLSFIKQVFKDGYFHGDPHPGNLFISEGKIYFIDFGIMGNLENGMRVALNDIL YSFTAQDVEGMMQGILSVTSFDTSINKTALSQDVERMLAKYSSLDLGVLSITDLLEDLLD VFVKNGLKASPQITILEKAALQIEGIFRELAPEVDLMTLAKNYFLENMGPDMLKQALNKE TLLIELFYQLKNGKNIPRRLNQLLEQMLNGRILINHDIYDYKNRIKTISQIANRFVVSIL FLAVMLTAALLSFNVAMQEISKFLFGLASILLVWELVLMFKHK >gi|304426198|gb|AEEM01000015.1| GENE 88 86822 - 87115 494 97 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1219 NR:ns ## KEGG: GALLO_1219 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 97 1 97 97 108 100.0 6e-23 MDELKKVLLAGIGLTSMTLEKADAFVKELVEKGRLTVEEGKELQSELKRKGEDEAKELLD QLDVKTKTVQYATKEDVSRLEDKLDALLKQSASDDKE >gi|304426198|gb|AEEM01000015.1| GENE 89 87568 - 88491 874 307 aa, chain + ## HITS:1 COG:BH1906 KEGG:ns NR:ns ## COG: BH1906 COG2207 # Protein_GI_number: 15614469 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 18 289 16 287 299 107 26.0 4e-23 MKNNTDPLEIKIDENKHLLPYDYYSTVVEHGRPDVLFHWHPEIEINYIYEGSARFHIDYD YFNSQAGDIILIRPNGMHSIHPLENQKHVTDTFRFHLDMIGHSTVDQVSLRYLQPLQTSL YKFVPRIQPGMEGYEDIKECLFTIFELSKNEGRHFELLLKSKLNEFLYLLFYHHYVLRKN TDDAYRKNEQIRELIDYINNNYQKNLSIDFLSQFMGYSKTHFMAVFKQHAGTSCTEFIIQ VRLNKACDLLINTADPILEIATTVGFNNLSNFNRQFKRYYELTPSQYRKQFKKAHYIGPH PSRNLKN >gi|304426198|gb|AEEM01000015.1| GENE 90 88660 - 90579 2564 639 aa, chain - ## HITS:1 COG:L90678_2 KEGG:ns NR:ns ## COG: L90678_2 COG1263 # Protein_GI_number: 15673442 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Lactococcus lactis # 91 454 1 365 386 322 47.0 2e-87 MAKKDYTELAKDIVAHVGGKDNVVNVRHCVTRLRFVLKDESKADDDYLKQRDGVVTVVKA GGQYQVVIGNHVPDVYASVLETGVSGVGSLDVDEGDDVEKGNLFNRFIDLISGIFQPFLG PLAAAGIIKGIVAIMGAFGLSEANSAWYVILEAAGDGFFQYLPLLIAVTAARKFKMNEFT ALAIGGALVYPTLTTTIPALADAGLDKIFGISLELPSSGSYLSTVMPSILAMWVASLIEK NIKKITPDVVKLFVVPFVTILVTVPLTFLVVGPVANLLTDWLSAGFQAVLSFSPILYGFL LGALWQVLVMFGLHWALVPLAIMDVATNGMSAILVAACLPNFTQTGVLGAIMLKTKEQKV RTISTPAFISSIFGVTEPAIYGVTLPMRIPFYISCGVSGIIGALTMFFNVYGYSVGAMGV FQYPSYVNPANGDMSGMWVMIALSVLAVVLSFAVQMFAPVPYLYGGPKDASATTEEKVVE PVNDLKELKQEIIASPMMGDVVKLEDVPDEVFASGAMGKGIAINPAEGTVFAPANGEVTL VFPTGHAIGMRTENGAELLIHVGMDTVSLEGKGFKTYVEVGDKVEAGQKLLEFDLATIRE ANLPVISPIIVTNSADFDDVLTTQEARVNTGDYLLTTLA >gi|304426198|gb|AEEM01000015.1| GENE 91 90941 - 91780 931 279 aa, chain - ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 274 1 274 285 233 41.0 4e-61 MKIDKVYNNNVVLAKGDDGEEIIVMGRGLGFQKKPGDEIDTALVEKTFVMQDKDTTNELT RVYLDLSPAETEVVLDIIKHGQEVLGTTFDTAFYIALADHLHYTLQRTRENITIQNPLSW EIRKFFPKEYQLGRDALKIIFEKLGVILPDDEISSIALHFINAQKDSGMVEQNYQISKIV TDILGIVRLFYGKVVDEDSVSYNRFITHIQYFAQRVVNGVVQGKNDSFLYEQVKLNYPVA FSCSEKIKNYIESSYDFPMSRDEQVYITIHIQRLETSHN >gi|304426198|gb|AEEM01000015.1| GENE 92 91977 - 93509 1482 510 aa, chain - ## HITS:1 COG:SPy1114 KEGG:ns NR:ns ## COG: SPy1114 COG0038 # Protein_GI_number: 15675095 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pyogenes M1 GAS # 1 510 1 510 510 528 66.0 1e-149 MDSYHREYEFSLSSILSFVWRGIVVGCVSGIVVSLFRLLIGFISAKVVNYYELSHEQPSL LILILGVTLFIVVTIGFLIKSDSDIKGSGIPHVEGELKGLLHPNWWSVLWKKFVGGVLAI SMGFMLGREGPSIQLGAMAGKGVAKSLKAERMEQRVLIASGAAAGLSAAFNAPIAGLLFV IEEIYHQFSRLVWITALVASLVANFISLNIFGLTPVLDMPGDLAVLPLKHYWILLLLGAF LGVMGYVYEKTTLKATIIYDFLGKVCHIPSHFYGIFAAILILPIGYFYPQLLGGGNGLIT SLSTSHLTLMIVCLYFIIRFVWSMLSYSSGLPGGIFLPILTLGALLGFGFGLFFEQFGLY SSHYLSLFVVLGMAGYFGAISKAPLTAMFLVTEMVGDFRQLMTIAVVTLVAYIAMDLLKG EPIYEALLAKLSVPQDREVIEPTLIELTVSDKIAGKYVRDLTLPKNVLITTQIHAKKSEV VSGNTRLNAGDTIFLVVNEPEIGKVRELLM >gi|304426198|gb|AEEM01000015.1| GENE 93 93664 - 94737 1326 357 aa, chain - ## HITS:1 COG:SPy1105 KEGG:ns NR:ns ## COG: SPy1105 COG0687 # Protein_GI_number: 15675088 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Streptococcus pyogenes M1 GAS # 1 357 1 357 357 549 74.0 1e-156 MRRLYSFVLGVIAVTLVLFGVSVYMQKTTSSTSQSDKLVIYNWGDYIDPDLITKFTDETG IEVQYETFDFNESMYTKIKQGGTTYDIAVPSDYMIDKMRKENLLIKLDKSKITGLENIGD EFLGLSFDENNDYSIPYFWGTLGIVYNDTMVENAPEHWSDLWNSEYANDIMLVDGAREVM GIGLGTLGYSLNTKSLSELNAASQKLDDLTPNIKAIVGDEMKGYMINGDAAIGVTFSGEA SEMLDSNEHLHYVVPSEGSNLWFDNLVIPKTAKHIDEAYAFINFMLRPENAAQNAEYIGY STPNDAAKELLPDDVKNDQAFYPSEETIENLEVYDNLGQKWLGIYNDLYLQFKMYRK >gi|304426198|gb|AEEM01000015.1| GENE 94 94730 - 95518 923 262 aa, chain - ## HITS:1 COG:SP1387 KEGG:ns NR:ns ## COG: SP1387 COG1177 # Protein_GI_number: 15901241 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Streptococcus pneumoniae TIGR4 # 1 260 1 256 257 337 76.0 2e-92 MKKFANLYLTLVFIILYIPIGYLIFYSFNQGGDMNGFTGFTLEHYSEMFADSRLMLILIQ TFFLAFLSSILATAIGTFGAIFIYQARRKHQHAILSMNNILMVAPDVMIGASFLILFTRL AELFHFNLGFMTVLLSHIAFSIPIVVLMVLPRLKEMNDDMINAAYDLGATPWQMLKEVML PYLTPGIISGFFMAFTYSLDDFAVTFFVTGNGFSTLSVEIYSRARRGISLEINALSTIVF LFSILLVIGYYFISQDKGDRDA >gi|304426198|gb|AEEM01000015.1| GENE 95 95515 - 96309 718 264 aa, chain - ## HITS:1 COG:SPy1103 KEGG:ns NR:ns ## COG: SPy1103 COG1176 # Protein_GI_number: 15675086 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Streptococcus pyogenes M1 GAS # 1 264 1 264 264 390 81.0 1e-108 MKKNSSFFSIPYVLWLLLFVIAPVIMILWQSFFDIQGHFTLDNYKTFFSSWTYIRMSFNS ILYAAIITLVTLLISYPTAYFLTRLKHKQLLLMLVVLPTWINLLLKAYAFMGIFGQQGGV NAFLSFVGIGPKQILFTDFSFIFVASYIEIPFMILPIFNALDDIDSNLINASRDLGANEL QTFVKVVFPLSLNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQHFLTTQNWGM GSTIGVILIMAMLATMWVTKERRK >gi|304426198|gb|AEEM01000015.1| GENE 96 96293 - 97447 1461 384 aa, chain - ## HITS:1 COG:SPy1102 KEGG:ns NR:ns ## COG: SPy1102 COG3842 # Protein_GI_number: 15675085 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Streptococcus pyogenes M1 GAS # 1 384 1 384 384 657 89.0 0 MTNPIIAFKNVSKVFEDNGTVVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLDAT TGDVYLDGQRINDIPINKRDVHTVFQNYALFPHMNVFENVAFPLKLKKVDKKEIERRVEE ALKMVRLAGFEKRPIQKLSGGQRQRVAIARAIINEPRVVLLDEPLSALDLKLRTEMQYEL RELQQRLGITFVFVTHDQEEALAMSDWIFVMNDGEIVQSGTPVDIYDEPINHFVATFIGE SNILPGTMIEDYLVEFNGKRFEAVDGGMRPNEAVEVVIRPEDLQITLPEEGKLRVKVDTQ LFRGVHYEIIAHDELGNEWMIHSTRKAIEGEVIGLDFTPEDIHIMRLNETEEEFDARLEE YVEMEEHEDGLIHAIEEERNEEKL >gi|304426198|gb|AEEM01000015.1| GENE 97 97475 - 98377 995 300 aa, chain - ## HITS:1 COG:SPy1101 KEGG:ns NR:ns ## COG: SPy1101 COG0812 # Protein_GI_number: 15675084 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 8 297 4 293 295 497 82.0 1e-140 MLEFLNEELKGIDIRVDEPLKKYTYTKVGGPADYLAFPRNRYELARIVTFANKNNIPWMV LGNASNIIVRDGGIRGFVIMFDKLNTVTVNGYVIEAEAGANLIETTRIAKFHSLTGFEFA CGIPGSVGGAVFMNAGAYGGEISHILVSAQVITKEGEIKTIEARDMKFGYRHSAVQDSGD VVISAKFALKPGDYVLIEQEMARLTHLRELKQPLEYPSCGSVFKRPVGHFAGQLISEANL KGHRIGGVEVSKKHAGFMVNVADGNAQDYEDLIAHVIDTVEQNSGVRLEREVRIIGEKKR >gi|304426198|gb|AEEM01000015.1| GENE 98 98506 - 98988 290 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 134 118 250 278 116 44 7e-40 RMTKVYLSLGSNIGDKKAYLLAALERLEQLAQTSVTSVSSFYETAAWGKTDQDDFLNSCC ELETDLTPQELLLACQNIEKELKRVRHEHWGPRTIDIDILLYGNETIATENLSVPHPYMT ERAFVLVPLEEIAPQLQLNGQSISSYLAHLNVQEVRKLLV >gi|304426198|gb|AEEM01000015.1| GENE 99 98982 - 99344 174 120 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 119 1 119 278 71 31 7e-40 MDKIHLKDCRFYGYHGALAEEQTLGQIFVVDCTLSVDLQKASQSDVLEDTVHYGLVFETI KRQVEEERYALIERLAGAICQAIFEQFPPVQAINIKIFKENPPINGHYDAVGIELERERA >gi|304426198|gb|AEEM01000015.1| GENE 100 99411 - 100211 1162 266 aa, chain - ## HITS:1 COG:SPy1098 KEGG:ns NR:ns ## COG: SPy1098 COG0294 # Protein_GI_number: 15675081 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 265 1 265 266 394 74.0 1e-109 MKIGKHEIDGTACIMGILNVTPDSFSDGGSYTSIENALAQAEKMIAAGAKIIDVGGESTR PGYTFVEAEEEINRVVPVIRALKERFDVLVSIDTYKTETARAALEAGADILNDVWAGLYD GKMLALAAEKNVPIILMHNQEEEKYDNITKEVCDFLTERAQAALDAGVALENIWIDPGFG FAKNEAQNIELLKGLDAVCKLGYPVLFGISRKRTVDYLLGGGTLAADRDMGTAALSAWAV AKGCQIVRVHNVDVNRDIVKVISQLS >gi|304426198|gb|AEEM01000015.1| GENE 101 100249 - 100812 686 187 aa, chain - ## HITS:1 COG:SPy1097 KEGG:ns NR:ns ## COG: SPy1097 COG0302 # Protein_GI_number: 15675080 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Streptococcus pyogenes M1 GAS # 3 184 16 197 200 289 79.0 2e-78 MANQEKLEAAVYQLLEALGENPEREGLLDTPKRVAKMYQEMFSGLNEDPKDQFTAVFTEN HDEVVLVKDIPFYSMCEHHLVPFYGKAHVAYLPSDGRVTGLSKLARAVEVASKRPQLQER LTDQVATALEEALHPKGVFVMLEAEHMCMTMRGIKKPGSKTITTVAKGIFKENREERNEI LSLILGK >gi|304426198|gb|AEEM01000015.1| GENE 102 100850 - 102103 1084 417 aa, chain - ## HITS:1 COG:SPy1096 KEGG:ns NR:ns ## COG: SPy1096 COG0285 # Protein_GI_number: 15675079 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 408 1 410 425 492 57.0 1e-139 MNYQEALDWIHGKLKFGIKPGLERMAWMLEELGNPQEKLSAVHVVGTNGKGSVTSYLQHI FSLAGYEVGTFTSPYIVDFRERISLNGQMISETDFLDLVERVRPVVERLPLETTLEPATE FEVITVLMFEYFGHMHPVDIAFIEAGMGGLYDSTNVFKALAVICPSIGLDHQNVLGQTYA EIAEQKAGVLKEHVPFIFATERDNVRQVFLKKAQACGSQTYEFKKDFSVNETENGFDYQG QENLEDIRLAMLGKHQISNASLAITAALLLSKTYPKVTKEIIKYGLAQTHWVGRTELMFP NVMIDGAHNNESVQALVNVMQAYKDKNLHILFAAIDTKPIDSMLALLSQLADVDVTTFEY HNSLALENYPEQYHKVPDWKDWVKQIDSDSKDDFYLITGSLYFISQVRPVLLSRQQN >gi|304426198|gb|AEEM01000015.1| GENE 103 102717 - 103595 1133 292 aa, chain - ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 5 291 3 279 279 278 50.0 9e-75 MKIVKRFLAIVSLLVVVLLVGCSTSKSSSSTSSSSSSSGNTAKARTLDEIKESGTIKIGV FSDKKPFGYVDDKGDYQGYDVYFADRLAKDLGVDVEYVAVDPASRVEYLTSAKVDIILAN FTVTDERAEQVDFALPYMKVALGVVSPSSKLISSVDDLEGKTLIVGKGTTAETYFEKNYP KVNLLKYDQYSEAYQALLDGRGDALSTDNTEVLAWALENKGYEVGITSLGDTDTIAPAVQ KGNTELLDWINDEIKTLGEENFFHKDYEETLEPVYGDAANPDDLVVEGGNVD >gi|304426198|gb|AEEM01000015.1| GENE 104 103629 - 104375 288 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 20 228 147 353 398 115 35 2e-24 MKPILEISDLKKSYGEHNVLNDLSFSVDEGEVLVILGPSGCGKSTLLRCINGLESIQSGV VSLEGEEILNNPKELPLIRQKIGMVFQSYDLFPHLTVLKNLLLAPTRAQKRPRKEVEAEA LELLERVGLAGRENSFPHELSGGQKQRVAIVRSLLLHPKVILFDEVTASLDPEMVREVLE LIGELANEGRTMIIVTHELQFAKAIADRIIFLENGHIVEENDAKAFFTQPKTQRARDFLN VFDFSTVG >gi|304426198|gb|AEEM01000015.1| GENE 105 104381 - 105058 556 225 aa, chain - ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 224 1 224 225 293 71.0 1e-79 MQDSGLQVLFQGNNLWRLFQGLLVTINISLLSIVISIVFGFLFGFVMTSRFRIVRVLAQI YLEFIRIMPQLVLLFLVYFGLARTFNLNLSGEVAALIVFSMWGIAEMGDLVRGALTSLPK HQFESGLALGLTKTQLFIYVIIPQILRRLLPQAVNLMTRMIKTTSLIVLIGVVEVVKVGQ QIIEANRLTVPSAAIWIYGLIFLMYFAVCFPISRLSMYLEKVWKE >gi|304426198|gb|AEEM01000015.1| GENE 106 105018 - 105701 492 227 aa, chain - ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 22 227 1 206 206 261 75.0 7e-70 MFNWEFIRANIPLYQEALVLTIRLAFFGILGAFVLGLLISLIKYYKIPVLSQICQVYIEL SRNTPLLIQLYFLYFGLPKIGIVLSSEMCAVVGLIFLGGSYMAESFRSGLEAISKTQYEV GLSIGLKPVQNFFYVIFPQALAVSLPSLVANVIFLIKETSVFSIVALADLMYVAKDLIGL YYETDEALLMLVLAYLIVLLPISLVARLIERRLRHAGFGATSALSGK >gi|304426198|gb|AEEM01000015.1| GENE 107 105950 - 107668 1330 572 aa, chain - ## HITS:1 COG:SP0665_1 KEGG:ns NR:ns ## COG: SP0665_1 COG0147 # Protein_GI_number: 15900566 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Streptococcus pneumoniae TIGR4 # 1 382 1 380 380 498 62.0 1e-140 MHKKTVVDFKELGHRLIFENPVKILATKLIDDVEAILKKVVYYQSQGYYVVGYVSYEAGK AFENNFSVKTFPLSGEYLVYFTVHSEVKKEPFPLDYEMNITMPQVWESKTDKDEYEKAIS EIRQQIRQGNTYQVNYTVQLHNRINSNLFELYNRLVIEQDAKYNCYIEHDDFAVLSMSPE LFFEKNGSKLTTRPMKGTVARGINDAQDFRNKYWLANDSKNRSENMMIVDLLRNDMGRIS ELGSVTVSKLCDIEQYSTVWQMTSTIESQLKKDLSLFDIFNALFPCGSITGAPKISTMSI INQLEPSPRGVYCGSIGICLPHDDRAIFNVAIRTIQVKDDQAIYGVGGGITWDSEWESEY RETREKSAFLYKSQPTFDILTTAKITQKKVIFLKEHTKRLKSSARFFGWPFSETEFLDKI SELLKTLDLSDYCLRVLLHKSGQLSFEVSMLEDLPSTFLQAKLVQREEACDSPFTYFKTS YRPHIPNSDKEQVFISSDGYLQETSIGNIILEIDGTYYTPPVEVGILDGIYRKYLIQQGE VTERYLTKTDLENADHIYVCNSVRGLYEIDII >gi|304426198|gb|AEEM01000015.1| GENE 108 107684 - 108571 548 295 aa, chain - ## HITS:1 COG:lin0788 KEGG:ns NR:ns ## COG: lin0788 COG2962 # Protein_GI_number: 16799862 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Listeria innocua # 7 292 11 296 308 192 41.0 7e-49 MKKTNLGILLGLITYILWGFLSLYWKLLSGVNSYNTFSYRIIFTVLTMLVYMVLSKNKER YRGEIRQLISHKQELAMAVLASFLIALNWLTYIFAVSHQQATQASFGYYIMPLVSILLAL VFLHERLSPWMTAAIIIAGIGVGILAINTGQVPLVSILLAVTFALYGLVKKNVKLSSDVA MLVESSVVAPFVLIYLLFFSKESLLDYSLLENVLLLVSGIVTAIPLLLFAEAVKRAPLNI IGFIQYINPTIQLAIAVFVFHEKVGNGEVSGFIFIWIAIAIFILGQLMSLRKKSR >gi|304426198|gb|AEEM01000015.1| GENE 109 108558 - 109424 1056 288 aa, chain - ## HITS:1 COG:SP1360 KEGG:ns NR:ns ## COG: SP1360 COG0083 # Protein_GI_number: 15901214 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 287 289 342 65.0 5e-94 MRITVPATSANVGPGFDSVGVAVSKYLTIEILEPSEKWEVLHDLGDVPSDETNLLITTAL QVKADLQPHRIKMVSDIPLARGLGSSSSVIVAGIELANQLAHLQLSADEKLVIATKIEGH PDNVAPAIFGNLVISSYVDEKVNSAVAAFPEASFVAFIPNYELKTSDSRNVLPNEFSYKE AVAASSIANVAIAALLTGDLEKAGKAIEADLFHERFRQKLVKEFAPIKEAAHEVGAYATY LSGAGPTIMTLAPKAKEAELVERLEALALDGEVVALYVDTKGVFVEKD >gi|304426198|gb|AEEM01000015.1| GENE 110 109483 - 110769 1662 428 aa, chain - ## HITS:1 COG:SP1361 KEGG:ns NR:ns ## COG: SP1361 COG0460 # Protein_GI_number: 15901215 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 428 1 428 428 623 74.0 1e-178 MSIKIALLGFGTVASGVPFLLKENQSKITEAAHDTIEITKVLVKDDDEKNRLLAAGNDYN FVTNVDDILSDDSIDIVIELMGRIEPARTFITKALEAGKNVVSANKDLIATHGKELIELA KDKGVAFYYEAAVAGGIPILRTLANSLTSDKVTRILGVLNGTSNFMMTKMVDEGWTYEDA LKTAQELGYAESDPTNDVEGIDAAYKAVILSQFGFGMTIDFDDVAHKGITTITPDDVAVA QELGYVIKLVGDVREVESGISAEVSPTFLPKAHPLASVNDVMNAVFVESIGIGESMYYGP GAGQKPTATSVTADIIRICRRIKDGNVGKPFNEFVRETTLANPADVKSHYYFAINTPDKK GQLLRLAEIFNSENISFEQVLQQKANGTRARVVIITHSMSKTQLADVTAKLEAVEDFQVV NTLKVLGE >gi|304426198|gb|AEEM01000015.1| GENE 111 110992 - 111942 894 316 aa, chain + ## HITS:1 COG:SPy1094 KEGG:ns NR:ns ## COG: SPy1094 COG0726 # Protein_GI_number: 15675078 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Streptococcus pyogenes M1 GAS # 5 315 4 318 320 307 51.0 2e-83 MEKRRQHQKHSNKPLAIINIILLIACIVASVFLFIALKENNFIFSTTKTEQVSSSSASHT NTTTTSSASTVTSDSSSANTNENEVNWVKQDSNVSVPILMYHAIHVMAAEEASNANLIVD PTTFKSHIQRLSEEGYYFLTPEEAYKVLTENVLPNGNSKIVWLTFDDSLWDFYDNAYPIL QKYGAKATNNVITSTVGNSGNLSLDEMLEMKANGMSFQDHTVTHPDLSASDDATQTSEME DSKNYLDTNLNQDTIAIAYPAGRYSDTTLQIAANLNYKLGLTTNEGIASASDGLLSLDRV RILPTTTADSLIASIS >gi|304426198|gb|AEEM01000015.1| GENE 112 112013 - 112192 121 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQNNSFYYMSVIYLIIFFVAIIYNIAHSNMVFVYLWSALFLGNLAFLIYSFVRNHKKNK >gi|304426198|gb|AEEM01000015.1| GENE 113 112521 - 113117 409 198 aa, chain + ## HITS:1 COG:CAC0724 KEGG:ns NR:ns ## COG: CAC0724 COG1309 # Protein_GI_number: 15894011 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 10 176 10 174 185 73 29.0 2e-13 MIDGKTKQTKETKDRLFQALISLMENKSYEEIKIKDILDLSGVSRRTFYRHFANKNELLN HYFEQIINRYLTERKYFTETDNFEDMLAESMNFWYQERETLHILIKHQHYDFFFHQFNEH AKEVYMSITLPWFAYSGKIDTQNYAMSFIVGGYYNTLRNWLMQENPEEPKKIAHDIQRMI IKLTDFFDLDETNNIDNL >gi|304426198|gb|AEEM01000015.1| GENE 114 113197 - 113661 495 154 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1245 NR:ns ## KEGG: GALLO_1245 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 154 1 154 154 244 98.0 5e-64 MKKIAIFVLSVVSLFLVVGCSNSTLGGFSNLPDHLGDNKAVSNLAGAGVTYNYLTGNVDL ENEDDHEAKEKKRYYWLDHVNESYSDYLEDAKEKAENKKEVDTDDVAKQYANLYKYYTTA EDYLDDSDRKTELLNDYYKTLVGLKKLYDDNADN >gi|304426198|gb|AEEM01000015.1| GENE 115 113779 - 113979 74 66 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1246 NR:ns ## KEGG: GALLO_1246 # Name: not_defined # Def: putative transcriptional regulator # Organism: S.gallolyticus # Pathway: not_defined # 1 66 1 66 66 118 98.0 8e-26 MITYDPFYKTLNKKNMSEYELIFKHGISANTLHRMKKGEAITTKTLDTLCFILDCKVEEV IEYRNE >gi|304426198|gb|AEEM01000015.1| GENE 116 114080 - 114463 553 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15458846|gb|AAL00015.1| 50S Ribosomal protein L12 [Streptococcus pneumoniae R6] # 1 127 1 127 127 217 92 3e-55 MEESTMALNIENIIAEIKEASILELNDLVKAIEEEFGVTAAAPVAVAAAGAADAGAAKDS FDVELTAAGDKKVAVIKAVREVTGLGLKEAKALVDGAPANVKEGVATAEAEEIKAKLEEA GASVTLK >gi|304426198|gb|AEEM01000015.1| GENE 117 114517 - 115020 701 167 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|21910289|ref|NP_664557.1| 50S ribosomal protein L10 [Streptococcus pyogenes MGAS315] # 1 166 1 166 166 274 87 2e-72 MSEAIIAKKAEQVDAVAEKMKAAASIVVVDSRGLTVEQDTVLRRTLRENGVEFKVIKNSI LTRAAEKAGLDEMKDLFVGPSAVAFSNEDVIAPAKVLSDFAKDAEALEIKGGAIEGAVSS KEEIAALASLPNREGLLSMLLSVLQAPVRNVALAVKAVADNKEDDAA >gi|304426198|gb|AEEM01000015.1| GENE 118 115282 - 115422 98 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKIQKTDYSIGLVLYKTFSFKKIRFFAYKYLTFTDQWYIIVSEGD >gi|304426198|gb|AEEM01000015.1| GENE 119 115559 - 117667 1444 702 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 52 702 136 812 815 560 43 1e-158 MANNNFYGRDPFGNMDDIFNELMGNMGGYNSENRRYLINGREVTPEEFAQYRQTGKLPGN AEYQEGTPASAPKEDGILAKLGTNLTERARANELDPVIGRNKEIQETAEILSRRTKNNPV LVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGTQYRGAFEENIQNLV KEVKDAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRN TILKNAALARRFNEVKVNAPSAQDSFNILMGIRDLYEKHHNVILPDNVLKAAVDFSIQYI PQRSLPDKAIDLIDMTAAHLAAQHPATDVKSLEKEIADQKEKQENAVAKEDYEAALNAKV RIEELQKQIDNHTEGQKVTATVNDVAESVERLTGVPVSNMGASDIERLKELASRLKGKVI GQDEAVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDAIIR LDMSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLL LQVLDDGRLTDGQGNTINFKNTVIIATSNAGFGNEALTGQDDKDKKIMDRIAPYFRPEFL NRFNGIIEFSHLTKEDLNDIVDLMLDEVSKTIAKKGIDLVVSDAAKQHLIEEGYDEAMGV RPLRRVIEQEIRDKITDFYLDHTDVKHLKADMVDGELVISEK >gi|304426198|gb|AEEM01000015.1| GENE 120 117774 - 118421 578 215 aa, chain + ## HITS:1 COG:SA0565 KEGG:ns NR:ns ## COG: SA0565 COG2231 # Protein_GI_number: 15926286 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein related to Endonuclease III # Organism: Staphylococcus aureus N315 # 8 196 7 194 211 155 41.0 8e-38 MQLTLYNLYQKMLTHMGATNWWPADSKQQIIIEAILIQNTTELNATRASQLIKSVSNYDL QVLVDMPKENLEELVRPAGFMKNKSKAIQEVASWYLAHEENPTKIVQQYGSSLRKVLLSL HGVGPETADVLMAYIFDQPQFIADKYARTLFTQLGINDLTDYKSLAILLAELPQPFTFAD AQEFHGLIDEFGKQYFHPVEDFQKSFLAGDQLILK >gi|304426198|gb|AEEM01000015.1| GENE 121 118512 - 119198 536 228 aa, chain + ## HITS:1 COG:SP1104 KEGG:ns NR:ns ## COG: SP1104 COG3619 # Protein_GI_number: 15900971 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 7 200 13 205 234 68 27.0 7e-12 MNELEYMPQNSRFEAILLGFLGGALDVYCQIQFDTLVATQTGNILFLIADISHSPLQQTL IRLFSVLFFSIGFMFGLHVRANAKTAFWRVYALLPLLIVTMILPLLPDIRLLWVVLLALA TGLLTLTFSGSQIESHAYSILMTSGNYRKMITAWHQYFNADEKMCAMKRQAINYSLVVIS FVIGAITTAILYHFTHEKTIWIVTLNLACIIYHYSSVVVRYRLQACNI >gi|304426198|gb|AEEM01000015.1| GENE 122 119238 - 120188 1034 316 aa, chain - ## HITS:1 COG:BS_ybgG KEGG:ns NR:ns ## COG: BS_ybgG COG2040 # Protein_GI_number: 16077310 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Bacillus subtilis # 1 311 1 306 315 288 45.0 8e-78 MGTFKELLASQDYVILDGALGTELEKRGYDVSGKLWSAKYLLENPSVIQDLHDVYLRSGA DILTTSSYQATVQGLKDFGLSEKEALDIISLTVTLARQARDIFWNGLSDEAKKKRPYPLI SGDVGPYAAYLADGSEYNGNYQLTQEEYQAFHRPRIQALLSAGSDFLGIETIPNVAEAKA LLDLLATEFPQTEAYISFTAQDDKHISDGTPIEEVAALCEQSPQILAFGINCSSPAVISG LLKRIRTVSPKKPLVTYPNSGEIYDGATQTWKSIPDNSHTLLENSRAWHQLGAKIVGGCC RTSPEDIACLAQAFRE >gi|304426198|gb|AEEM01000015.1| GENE 123 120201 - 121577 1314 458 aa, chain - ## HITS:1 COG:BS_ybgF KEGG:ns NR:ns ## COG: BS_ybgF COG0833 # Protein_GI_number: 16077309 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 1 457 1 459 470 499 58.0 1e-141 MENHNFENEGQFQRKMTSRHLFMLSLGGVIGTGLFLSSGYTIAQAGPLGAVLSYLVGAVV VYLVMLSLGELAVAMPVTGSFHTYATKFISPGTGFTVAWLYWICWTVALGTEFLGAAMLM GRWFPNVPTWLFATLFAVIIFAINALSVRSFAEAESFFASIKVIAIIIFIILGLGAMLGL VSFDGEHKAILFTNLTANGAFPKGITAVISVMLAVNYAFSGTELIGIAAGETDNPKEAVP KAIKTTIGRLVIFFVLTIVVLASLLPMKEAGVSTAPFVDVFDKMGIPFAADIMNFVILTA ILSAGNSGLYASSRMLWSLANEGMLSKKVVKINEHGVPMRALLLSMAGAVLSLFSSIYAA DTVYLALVSIAGFAVVVVWLSIPMAQINFRKAFLKEHSLDELSYQTPFTPVLPYITIILL VISIIGIAWDASQRAGLYFGIPFVILCYVYHYLRYKKW >gi|304426198|gb|AEEM01000015.1| GENE 124 121875 - 122468 654 197 aa, chain - ## HITS:1 COG:SPy0886 KEGG:ns NR:ns ## COG: SPy0886 COG0218 # Protein_GI_number: 15674911 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pyogenes M1 GAS # 3 197 5 199 199 343 87.0 1e-94 MTEYLNTHNASLLLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKP GKTQLLNFYNIDDKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFR HDPSADDVQMYDFLKYYEIPVIVVATKADKIPRGKWNKHESAIKKKLNFDKSDKFIIFSS VDRTGLDESWDSILDEL >gi|304426198|gb|AEEM01000015.1| GENE 125 122479 - 123708 273 409 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 163 407 255 457 466 109 33 9e-23 MVGNRTNDVKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLAE VPKPKELLATLDEYVVGQDRAKRALAVAVYNHYKRVSFAESRNEEDVDLQKSNILMIGPT GSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADFNIERAERGII YVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK NILFIVGGAFDGIEDIVKQRLGEKVIGFCQNNRKIDENASYMQEIISEDIQKFGLIPEFI GRLPVVAALEQLTADDLVRILTEPRNALVKQYQTLLSYDGVELEFDKDALQAIANKAIER KIGARGLRSIIEETMMDIMFEIPSQEEVTKVRITKAAVEGKDKPILEIA >gi|304426198|gb|AEEM01000015.1| GENE 126 123741 - 123911 212 56 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1256 NR:ns ## KEGG: GALLO_1256 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 56 1 56 56 85 100.0 6e-16 MQRSIFGVFTAFLAVICILCALPALRKKRYGLAVLLFLNAFTNIVNTIHAVYGTLF >gi|304426198|gb|AEEM01000015.1| GENE 127 123928 - 124422 614 164 aa, chain - ## HITS:1 COG:SP1571 KEGG:ns NR:ns ## COG: SP1571 COG0262 # Protein_GI_number: 15901414 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 159 1 160 168 196 58.0 2e-50 MTKKIVAIWAEDENRLIGVNDGLPWRLPKELKHFKETTMGQALLMGRVTFDGMNRRILPG RETLILTRDKSFEADGVTIVHDMDEVFDWFEKQDKTLYIVGGASIYKAFLPHCDAIIKTT VHGVFEGDTYFPDVDLTSFRKVSETFNEKDDKNAYDFTITVLEK >gi|304426198|gb|AEEM01000015.1| GENE 128 124510 - 125349 976 279 aa, chain - ## HITS:1 COG:SP0669 KEGG:ns NR:ns ## COG: SP0669 COG0207 # Protein_GI_number: 15900570 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 279 1 279 279 503 85.0 1e-142 MTKADVIFKENIKKIMEEGVFSENARPVYQSGGQANSKYVTGAFAEYDLSKGEFPITTLR PIPIKSAIREIFWIYQDQTNDLSVLNDKYNVKYWNDWEVDNSGTIGERYGAVVKKHDIIR KILKQLEENPWNRRNVISLWDYEAFENTDGLLPCAFQTMYDVRRVDGEIYLDATLTQRSN DMLVSHHINAMQYVALQMMIAKHFGWKVGKFFYFVNNLHIYDNQFEQARELLSRESTDCK PRLVLNVPDGTDFFDIKPEDFELVDYEPVKPQLKFDLAI >gi|304426198|gb|AEEM01000015.1| GENE 129 125670 - 126848 1412 392 aa, chain + ## HITS:1 COG:SP1727 KEGG:ns NR:ns ## COG: SP1727 COG3425 # Protein_GI_number: 15901560 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxy-3-methylglutaryl CoA synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 390 9 398 398 510 67.0 1e-144 MKIGIDKIGFATSQYMLNMDDLAESRQVDPEKYSKGLLLRTLSIAPVNDDIVTLGASAAD SILTDDDKEAIDMVIVATESSVDQSKAAATCIHNLLGIQPFARSIEMKEACYSATAALDY ARLHVEKHPESKVLVIASDIARYGAHTSGEPTQGAGSIAMLISQDPQILLLNDNSVAQTR DIMDFWRPNYSTTPYVNGIYSTKQYLDMLKTTWAEFQKRFNTSLSDFSAFCFHLPFPKLA LKGFNKIMDKTLPADLQKKLKANFESSILYSKQVGNMYTGSLFLGLLSLLENSENLVGGD DIAFFSYGSGAVAEIFTGTLVEGFKDKLKNSRLQELKQRIALSVEDYERIFFEEPVLDAD GNASFANYKTGTFALKEIRGHERIYGKTNEID >gi|304426198|gb|AEEM01000015.1| GENE 130 126742 - 128106 1224 454 aa, chain + ## HITS:1 COG:SPy0880 KEGG:ns NR:ns ## COG: SPy0880 COG1257 # Protein_GI_number: 15674905 # Func_class: I Lipid transport and metabolism # Function: Hydroxymethylglutaryl-CoA reductase # Organism: Streptococcus pyogenes M1 GAS # 35 454 4 423 425 525 67.0 1e-149 MLTAMLLLQITKLEHLPSKKFVDTKEFMEKQTKSTKVNWSGFSKKTITERLEHLENNHLL STETLNDLKENTLLSLETANQLTENVLGTFSLPFSVAPDFQVDGATFNVPMVTEEPSVVA AASFAAKIIKRSGGFKTKVHSRKMIGQVALYDVVDKAIAKETILNHSAQLLTLANEAHPS IVKRGGGARELTMEEKDEFLIVYLTVDTQEAMGANMVNTMMEALVPSLEELSGGKTLMAI LSNYATQALVTAECQVDLRYLSRNKEEAHELAQKFELASKLAQVDVYRATTHNKGIFNGI DAVVLATGNDWRAIEAGANAYACKDGQYRGLATWSFDKEQQVLRGQLTLPMPIATRGGSI GLNPTVKIAHELLGHPDAQTLAKIIVSVGLAQNFAAVKALTSTGIQAGHMKLQAKSLALL AGATENEVGKVVQQLLQAPHMNLETAKTILKNLK >gi|304426198|gb|AEEM01000015.1| GENE 131 128283 - 128726 362 147 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1261 NR:ns ## KEGG: GALLO_1261 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 147 1 147 147 279 100.0 2e-74 MTMSYPKWSELPDIDLYLDQVLLYVNQIGEANHQNEKGLTASMINNYVKHGHLEKPIKKK YSRKQVARLIVITSLKNVFSIQEISQTLAILTADNQSQKRYDDFVACMNGEKIDDLPPVV VSACQTLQLYYQTHQLVQELEGEKDEC >gi|304426198|gb|AEEM01000015.1| GENE 132 128716 - 129372 690 218 aa, chain + ## HITS:1 COG:SPy1159 KEGG:ns NR:ns ## COG: SPy1159 COG1272 # Protein_GI_number: 15675135 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Streptococcus pyogenes M1 GAS # 4 218 2 216 216 257 75.0 1e-68 MNASMTMKLSKRLSFGEEVANSVTHAVGAVAMLVLLPITAIYSYQHYGIEAAVGMSIFDI SLFLMFLSSTIYHSMQYDSPQKFILRIIDHSMIYIAIAGSYTPVALSLVGGWLGYVIIIL QWGATIFGILYKIFAKKINEKFSLFLYLLMGWLVIFIIPSIVSKTGVAFWLLMLAGGLSY TIGAIFYARKRPYDHMIWHLFILLASVLHYIAIVYYML >gi|304426198|gb|AEEM01000015.1| GENE 133 129412 - 130410 1050 332 aa, chain - ## HITS:1 COG:SPy0879 KEGG:ns NR:ns ## COG: SPy0879 COG1304 # Protein_GI_number: 15674904 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 329 1 329 329 531 73.0 1e-151 MINRKDEHIKYALKYQSPYNSFDDMELIHHSFPDYDLSEIDLHTHFAGRDFEFPFYINAM TGGSEKGRAVNQKLAQIAQATGLVMVTGSYSAALKNPHDDSYPSKEEFPELLLATNIGID KPYELGLQTIHEMQPIFLQVHVNLMQELLMPEGEREFRQWKENLADYATKMPVPVILKEV GFGMDLKTIEMAHKLGIKTVDISGRGGTSFAYIENQRGHNRSYLDEWGQSTVQTLLNAQP MIDKIEILASGGVRHPLDIVKCLVLGAKAVGLSRAILKLVEKYSVEEVITIINGWKDDLR LIMCALNCKTIAELRQVDYLLYGKLNEANQKR >gi|304426198|gb|AEEM01000015.1| GENE 134 130452 - 131459 752 335 aa, chain - ## HITS:1 COG:SPy0878 KEGG:ns NR:ns ## COG: SPy0878 COG1577 # Protein_GI_number: 15674903 # Func_class: I Lipid transport and metabolism # Function: Mevalonate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 330 1 330 335 357 58.0 3e-98 MKTISVQTGGKLYIAGEYAILTPGQTAILKNIPIHMTATVKEAEKITLFSDMFDYATDMT VDKNYALIQQTIVTLATYLDKSLHNLPAFKLDITGKLERDGKKFGIGSSGSVTVLTLKAL SAFYELNLSADTIFKLASYTLLKLGDNGSMGDIACIAYDDLVAFTSFDRQKVSTWIATED IKTVLAKDWGYHIEIIKPALACDFLVGWTKQPSISKDMINLVKSAITKAFLEDTERNVQI CKQALQTGDKMAVKASLQKVSDLLLGLSSAIYNDKLKALKSAEKGLDVIAKSSGSGGGDC GIAISFSESDSHELAQRWQKAGIEILYQERLSDER >gi|304426198|gb|AEEM01000015.1| GENE 135 131446 - 132396 965 316 aa, chain - ## HITS:1 COG:SP0382 KEGG:ns NR:ns ## COG: SP0382 COG3407 # Protein_GI_number: 15900305 # Func_class: I Lipid transport and metabolism # Function: Mevalonate pyrophosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 315 1 315 317 414 70.0 1e-116 MDRKIVTVKSYANIAIIKYWGKADAVKMIPATSSISLTLENMFTTTTVSFLPQSVGHDEF YINGVLQDEKEHAKISAIIDQYRGGRSEFVKVETSNNMPTAAGLSSSSSGLSALVKACNE LFETGLNQSELAQKAKFASGSSSRSFFGPIAAWDKDSGDIYPVQTDLKLAMIMLVLSDSK KPISSREGMKRCAETSTTFADWVKQSEQDYKDMLAYLKANDFEKVGELTERNALAMHDTN THANPPFNYLTDETYAAMDFVKSLRAQGEKCYFTMDAGPNVKVLCLEENLERLTKRFEEN YRVIASRTKVLPDEND >gi|304426198|gb|AEEM01000015.1| GENE 136 132378 - 133256 1082 292 aa, chain - ## HITS:1 COG:SPy0876 KEGG:ns NR:ns ## COG: SPy0876 COG1577 # Protein_GI_number: 15674901 # Func_class: I Lipid transport and metabolism # Function: Mevalonate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 292 6 297 297 367 67.0 1e-101 MTKKIGVGKAHSKIIWMGEHSVVYGYPAIAIPLQGIEVECHIYPAEEKIHFDFYDTLSTA VYAALEYLNHTDVSITYAIRSEIPQKRGMGSSAAVSIAAIRAVFDYFEQSIDMDTLEILV NKAEIIAHSNPSGLDAKTCLSDKAITFIRNIGFSTLDLDLDAYLVIADTGIYGNTREAVE KVAQAEEANLPHLAVLGDLTEIVQKAIQDKDIQKIGYMMTKAHAHLQAIGVSIDVADQLV KLSLENGALGAKMSGGGLGGCIIALASTKADAEKISNALKEGGAVQTWIEKL >gi|304426198|gb|AEEM01000015.1| GENE 137 133549 - 134592 1128 347 aa, chain - ## HITS:1 COG:alr4046 KEGG:ns NR:ns ## COG: alr4046 COG0435 # Protein_GI_number: 17231538 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Nostoc sp. PCC 7120 # 26 302 42 307 335 187 40.0 3e-47 MPNYTNPNIKPVEIKIRPVETKTEIDERGAFQRQPNHFTTPFGDGEGELKAEKGRYHLYW AKGCHWSNRASIVRELLGLEDAISVTIVGHDYEDPEKRRYGWDFAAYENQVDPTTGAEFL SEFYYRADPDYTGRTTVPALVDLETYTVVNNDYHRLTNYLEVNFKPFQKVNAPNLYPEEL RADIDNLNDNVLFPFVNNGVYRMMFAQSLVAYEEAFDDFFTTLDVLEKRLENNRFLFGDY VTDSDVRFFVTLARFDTHYYRNLGPIKKRISEYTNIWGYARDLYEIPAFKHNTYFHDIAR GWDTKKEKLFVDFNSRFADDIDFDAIWSTPQKRKYLSKTPEQKFLID >gi|304426198|gb|AEEM01000015.1| GENE 138 134609 - 135565 789 318 aa, chain - ## HITS:1 COG:Cgl1235 KEGG:ns NR:ns ## COG: Cgl1235 COG0435 # Protein_GI_number: 19552485 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Corynebacterium glutamicum # 24 312 40 327 359 276 46.0 3e-74 MTTKFVSKEVDDSGHFKRQKTRFTTPFGKEEGQLPVEKNRYRLIVSYACPWAHRQLIALK LLGLENVISVGVVNPIRPVGVNRTDWEFSLDKNNTDPVLGVRYLSELYLKTDSAYQGRFT VPAVVDLQTKEVVNNDFYNLLKIWETDWTPFHSTEAPDLYPEELRADIDALNEIIFHDIN NGVYKAGFATSQKAYEEAYDKLFQRLDELEERLAHSRYLFGERLTDSDIRLYVSLVRFDI AYYNGFRCNRNRLIDFPNLWGYARDLYQQEAFKETTNFDHIKKHYHLSAVDNPHQILPKG PDLSIWDLPHDRASRHYI >gi|304426198|gb|AEEM01000015.1| GENE 139 135562 - 135708 173 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLLKSLFIYEDDPRSMIYRLTSLQANGYLEDISLLFLEEIESGERL >gi|304426198|gb|AEEM01000015.1| GENE 140 135710 - 136195 574 161 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1269 NR:ns ## KEGG: GALLO_1269 # Name: not_defined # Def: putative acetyltransferase, GNAT family # Organism: S.gallolyticus # Pathway: not_defined # 1 161 1 161 161 311 98.0 3e-84 MTFKYTIETDSDKVDFQQVADVLHSAGLASNTDVKQTEKSFRNSDITIYIKDGNKVIGVG RALTDFVSQGAIYNVAVAADYQGQHIGHTIITTLLEKLAGINVILYTHPQTLTLYEKYGF RRNKTAFAHFDHGTPESLQWMEDEGFFLPENYRFDSEKGRY >gi|304426198|gb|AEEM01000015.1| GENE 141 136205 - 137059 931 284 aa, chain - ## HITS:1 COG:L162009 KEGG:ns NR:ns ## COG: L162009 COG0834 # Protein_GI_number: 15672919 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Lactococcus lactis # 40 280 35 275 281 154 40.0 2e-37 MKKKVKWIISIIVVALVGLLIFDKVTKNTSEAKSDSSEKITVVAATSGSPKPFTYEEDGE LTGQNIELIKAVFEKLPQYKLKIVKVEFSSIFSGLTSGRYQIAVNNLAKNAEREKNYLFT DPIFKNSYVVIFKNGSDKAKTADEWSDLAGLSTVGSSGVNSTTAIEEYNKANPDNTIELN YSSEDLKSQLEGVESGKYDFLVMDKPMFEYYQKEYSLDLTGKTISGDLSTALMSEPYSYF VVGKEETQLAEDINAALKEVVEDGTSKQINEKYFDEDYSPTYDD >gi|304426198|gb|AEEM01000015.1| GENE 142 137209 - 137967 676 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 242 1 242 245 265 51 2e-69 MLSVKNIEKSFGDKKVLDGISLTVNQGDVVVILGPSGSGKTTFLRSLNYLEKADAGELIL DGKTYDLAKISRKDVLEIRKKTAFVFQNYNLFANKTAIENILEGLVIARKIPKEEAIPIA ENALKKVGLLEKKDYYPSQLSGGQQQRIGIARAIAVKPDVILFDEPTSALDPELIGDVLD VMKELAQEGVTMVVVTHEMSFARDVATHVIFMEGGHIIEEGDPKEFFSKPKEERTKQFLT RIIPELNIDPVI >gi|304426198|gb|AEEM01000015.1| GENE 143 137988 - 138668 684 226 aa, chain - ## HITS:1 COG:lin2442 KEGG:ns NR:ns ## COG: lin2442 COG0765 # Protein_GI_number: 16801504 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 6 224 9 224 238 126 34.0 3e-29 MDFSYILETFVKTLSGIPVTLGIMVVSILLSFFPALFLALGRIYKVKGVTGFSVIYLAFI RSTPAILLILFFYSLFPSLINQLLKATGFNIFDINPIYYAYIIFGLMTTGSLSEIIRSAI LTVDKGQLEAAQAIGLSTSQAYIRIVFPQAIRQALPNLCNLVINLVKGTSLVFVMTVKDI TAIAKIEAAYGYHYFESYFVIFIIYIVICGLIQYGFKFLEKRAQIV >gi|304426198|gb|AEEM01000015.1| GENE 144 138678 - 139370 508 230 aa, chain - ## HITS:1 COG:lin2442 KEGG:ns NR:ns ## COG: lin2442 COG0765 # Protein_GI_number: 16801504 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 3 225 4 223 238 138 37.0 1e-32 MVSYEPSRVITFLPEILSALPLTLWVLVLTILFGSLLGLFLAWSQLSGEKSLSSFARGYV FILRCTPPIVLIFLVFYGLPRFLEWWLGIDVNGWSRSVFVILAMTLLFAASISEVFKSSY QALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTAIINLLKDIALAYTIGLVDL MGAGNLVISRNLGNYSLETYTAVAIIYWVLALILAVGTHFIENELDTTRG >gi|304426198|gb|AEEM01000015.1| GENE 145 139380 - 140258 1289 292 aa, chain - ## HITS:1 COG:L121253 KEGG:ns NR:ns ## COG: L121253 COG0834 # Protein_GI_number: 15674033 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Lactococcus lactis # 41 282 34 268 280 80 27.0 5e-15 MSKKKWIVAGGVVVALVAATVIGRQLTGKTTASAQSSSGDSDKVTTLQVAHTQNYVPYDY VDENGESDGFEVAVLKAVDKKLKNYKFEYTGTSDEDLLIGLESGKYDIGVKGAWYTAERA EKFVIPDEAIGASVIGFAIRKEDESKYTDIDSFANSGGKLVPISPQNAQYNVIQEYNKTA KNPIELTESESFSVADAYAWVLEGRYDAYFSIKLSFEEAVQDEDGAYHQYADQLTWFPYK GIETYPLIHKNATNEAFAKEYDKAIKELKEDGTIAKLSEKYFGEDVFSYVTD >gi|304426198|gb|AEEM01000015.1| GENE 146 140285 - 141286 1238 333 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1275 NR:ns ## KEGG: GALLO_1275 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 333 1 333 333 660 99.0 0 MTTKREWVLKAFKNEKVDKVPVGFWYHFTTDDERGDGFNPEIFNKNIAGHKKFVSDVNPD FVKVMSDGFFTYPNEQIHQGVTSIKELEGIVSIGENHPWITQQVELAKEIREDFPEDIAS FYNIFAPVTYLKWQLAGKGGNGDEIIENFIKEDAELTKEVLDVVAGDIGILTKRLIKEAG VDGIYLSVQNLQDLRSSKEEYNQVIKPGELHILNRAISAGGTNILHICGYEGATNDITYY TDYPADVINWAVELEGVSLSEGRQLFGGKTVLGGFENTEKGLLYLGSKEAIQGKVKELLD EAGRQGVVIGADCTVPSDISSERIDWVKEAVAL >gi|304426198|gb|AEEM01000015.1| GENE 147 141443 - 141631 80 62 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1276 NR:ns ## KEGG: GALLO_1276 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 62 1 62 62 88 100.0 7e-17 MIVTEKQLRNISIVTLIIFVLSLLIFLKISPFNQLISDYQSSEITKEDLQYLNCLKSLTH LP >gi|304426198|gb|AEEM01000015.1| GENE 148 141867 - 142772 975 301 aa, chain + ## HITS:1 COG:SP0927 KEGG:ns NR:ns ## COG: SP0927 COG0583 # Protein_GI_number: 15900807 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 296 1 298 302 182 34.0 5e-46 MNFQQCRYVEAVARVGSFSQAAKELFMTQPNLSSSIKDLENELGVQLFTRSNTGTRLTED GYDFLKYAKRIIGELDLLEQRYHDQFKKSFTVASHHYDFLSIPLAKVAQQFNQDYQEFQT IETTTKKILESVARFEADLGIIYLDDENKHILESSLEHQDLEFTSLGDFPTRVFLRRNHP LAHKDVISESDLKGYDQIRFRQEQSGLNFDEDALQIHDEQHVLYSNDRGTVMNLLCATDA YASGLGIVNSFVRDQIVLIPLQDSPKHTLGYVTNKKKKVSKIGTAFIQEIKKSLNEFPEA N >gi|304426198|gb|AEEM01000015.1| GENE 149 142839 - 143678 820 279 aa, chain + ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 5 279 7 284 286 296 51.0 4e-80 MHFKTLNNGIQIPVLGFGVWQIFDQAQCQESVENALEVGYRLIDTAAIYKNEEAVGRAVK ASGLSREDVFLTSKVWIDHLGYTETKKAFEETLRKLDTDYLDLYLIHQPYGDTHGAWRAM IELYKEGYIRAIGVSNFSTGRLTDFALNTEVVPALNQIELHPYKQHPIIQAANAQFGIAT QAWSPFNRGEDNIFKDATLNSIAEKHGKAVVQVILRWQVQNDILTIPKSVHLERMKENFD IFDFELTPDDIKQIQSLDRFPNNYGPNESPEHVKRLLGL >gi|304426198|gb|AEEM01000015.1| GENE 150 143839 - 145068 1106 409 aa, chain - ## HITS:1 COG:SPy0875 KEGG:ns NR:ns ## COG: SPy0875 COG0642 # Protein_GI_number: 15674900 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 407 1 408 410 467 58.0 1e-131 MFRKLRIRFIAIASLAILIVLFSVVGVLNSARHIQTVNEINKILTLISDNDGTFPSVSKA TSELGNTVSVDTLFQYRYFSAVIDEDGNITSLNSSNISDLTDEQVESYLTKINKSGDTSG DFRYNNHTYSYLVTDESDDSTLIVVLDATNQVEENMTLVHLSLWMSGVSFAFFVLMVSIF SGRVIEPFIRNYERQRRFITNAGHELKTPLAIISANNELVEMMNGESEWTKSTNDQVERM TGLINSLVAMARLEEQPEVVLTDLNFSAIAEDAAEDFKGPVIKDGKQFVMEIQPDIHVKA EEKSLFELVTLLVDNANKYCDAGGTVSVKLSKANRLSKARLEISNTYAEGKNVDYSKFFE RFYREDESHNNKKSGYGIGLSMAQTMVKLFKGSISVSYSGDTITFLVSL >gi|304426198|gb|AEEM01000015.1| GENE 151 145077 - 145757 850 226 aa, chain - ## HITS:1 COG:SPy0874 KEGG:ns NR:ns ## COG: SPy0874 COG0745 # Protein_GI_number: 15674899 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 225 1 221 222 273 64.0 2e-73 MKILVAEDEIQMNRVLTTALTHEGYDVDSVYDGQAAIDMANENAYDVMVMDIMMPVKSGI EAVQEIRQTGNQSHIIMLTAMAEVDDRVTGLDAGADDYLTKPFSLKELLARLRSMSRRVD TNFTSNILTVGTVTLNVGEQELVSQNTIRLAGKESKMLEFFMLNAGKKLSTDQIFNHVWA NDKDDPEIDNGYVFIYVSYLRQKLKSIGANVVIEGEEMGDYELKEL >gi|304426198|gb|AEEM01000015.1| GENE 152 145788 - 146411 508 207 aa, chain - ## HITS:1 COG:SPy0873 KEGG:ns NR:ns ## COG: SPy0873 COG2357 # Protein_GI_number: 15674898 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 2 207 10 215 216 268 62.0 5e-72 MTDMIYGEYADYLPLILEDFSQRIRKKNDEVKKETGYKLFEHFIARVKTSESMTEKCQRK NLPVTTESALKKVRDSIGLRIVCGFVDDIYTLVDLIRSFDDCTIVAEKDYIKNAKPNGYR SYHLIVEVVTPYPDCLGNKQGSYFIEIQLRTIAMDSWASLEHQMKYKHDIKDPKRIVREL KRCADELASCDLTMQTIRNLIQESSQD >gi|304426198|gb|AEEM01000015.1| GENE 153 146547 - 147173 633 208 aa, chain - ## HITS:1 COG:CAC1476 KEGG:ns NR:ns ## COG: CAC1476 COG1174 # Protein_GI_number: 15894755 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Clostridium acetobutylicum # 1 202 1 202 202 161 50.0 9e-40 MIDYFKTSSDKLITALIEHIELTSFSLLFALLFASVITVILLFYPKIRQASVYVLSLLYA IPSFALFTLLIPVTGLGTRTAIIALVIYAQYTLVRTFLAGLTQVDDSIVEAATGMGMTRW QILAKIQLPLAQSSIFAGLRLAASSMIAIATIASTINAGGLGSILFDGLRTMSLPKLLWG IILTVALSLLVNLILYLVEELVKNESVS >gi|304426198|gb|AEEM01000015.1| GENE 154 147166 - 147939 371 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 242 1 239 245 147 34 4e-34 MTEKTMIQFEHVSKVYGDKTVVNDINLTIENGEFITILGTSGSGKTTMLKMINKLIEPTS GTILFAGQDIEQMDSVSLRRQIGYVVQQIGLFPHMTVAENIATVPKLLGWDKERIENRVG ELLDLVQLPAADYGERYPSELSGGQQQRIGVARALAADPDVMLFDEPFGAIDAITRNDLQ EELQAIHQKLNQKTFVFITHDIYEAFKLGTRVVIMDNGTICQFDTPENIIKNPGNEFVQK LITTAQEQEKLWRASYD >gi|304426198|gb|AEEM01000015.1| GENE 155 147952 - 148872 1145 306 aa, chain - ## HITS:1 COG:CAC1474 KEGG:ns NR:ns ## COG: CAC1474 COG1732 # Protein_GI_number: 15894753 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Clostridium acetobutylicum # 4 305 6 303 303 387 65.0 1e-107 MKNKKVISGALLVVILVAIVGGIWAWRNNQSSEAQQSSTTIRVGSKDFTENLVIAEIYAL ALEDNGYTVERVSNISSSLIHNSIVNDEIDLYPEYTGTGLLSVLGEDMETDPEKVYKTVK KEYEEQFNLTWLDYASANDSQGLVIRTEVANSLNIKTISDLQAHASELRFASQGEFDERE DGLPGLEKTYGTFNWQSSKVYDNSLKYSVLENDEADVTPAYTTEGQLVNTDEFTLLEDDK QFWPPYNLAPVVRDNILDDNPDIKTILNNISAKLDTETVTELNAKVDVDGQEYTDVAKEY YDSIKG >gi|304426198|gb|AEEM01000015.1| GENE 156 148862 - 149497 574 211 aa, chain - ## HITS:1 COG:CAC1473 KEGG:ns NR:ns ## COG: CAC1473 COG1174 # Protein_GI_number: 15894752 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, permease component # Organism: Clostridium acetobutylicum # 5 210 9 214 218 155 49.0 6e-38 MLNDIAAYFADNGNTYLGYVWQHISLSFEALLIALIIALPLGYFSYEKPFVRQLSTLLTQ GLRVIPSLGILFILIPFIGVGRLPALIALVILGIPPILLNTIVGFASVSENLLETALGLG MTRSQLLTKVQFPLALPHILNGIKLALVEIIASATLATYIGAGGLGTLIFTGLGLYRYDL LLIGGGSVAILSFLSMIIFDLSIKGVEHYEK >gi|304426198|gb|AEEM01000015.1| GENE 157 149487 - 149939 386 150 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1286 NR:ns ## KEGG: GALLO_1286 # Name: not_defined # Def: putative transcriptional regulator, MarR family # Organism: S.gallolyticus # Pathway: not_defined # 1 150 1 150 150 256 100.0 2e-67 MISNARKYARLRDEQFSLYESYAKKHGLNSKSLLVFMWIYHNPHGMTQESIAKRTFSTKQ VIQAIVKTYMKKGILYLEPSRIDRRKKLIRLTETGQQFAAELLEPLADFEAQAMSALTLE EQEVLLSATAMFTDRLKELLESHQVKEHVK >gi|304426198|gb|AEEM01000015.1| GENE 158 149929 - 150906 1213 325 aa, chain - ## HITS:1 COG:AGc1508 KEGG:ns NR:ns ## COG: AGc1508 COG0604 # Protein_GI_number: 15888165 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 315 22 345 348 95 26.0 8e-20 MKAVIVSKAGDSSVLKVTQIAKPQVKSGWSLVKIMGFGINRSEIFTRQGLSPSVTFPRIL GIECVGVIEETTDEQRLPVGQKIISIMGEMGRDFDGSYAEYVLLPNEQIYPISTQLDWAT LATIPETYYTAFGAYQNLKITSRDTILVRAGASGVGTAFVKLVKAKFPDVNVYASVRNTA KKAQLLDAGYDDLVIDDNGVLKTDVTFTKILELVGPATIKDSLGHLQENGIICSCGQLGR KWYLEEFDPIMELKNNVYLTTFYSGNVSQDKIQKMLAYIEQEQVDVRPERVFDLDSIQAA HDYLDSVAAFGKVIVLNKEENFSDK >gi|304426198|gb|AEEM01000015.1| GENE 159 151175 - 152947 186 590 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 378 572 27 226 245 76 30 1e-12 MENKKKTSFYGRMKPYIKGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTA TGMIPGIDLDKVGEIALTLAILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVP LNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTMLLIGSIFMMFHSNVSMALTAI GSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVR IFSQPLSQIAQAFTQMQSATAAMSRVFEFLEEDEMEDESDKERQLSDVNGEVAFDNVFFG YSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGRITIDGVDTRLMT REEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSF VIAHRLSTIRNADLILVMKDGNIIEQGNHDDLMQQGGFYADLYNSQFEVA >gi|304426198|gb|AEEM01000015.1| GENE 160 152937 - 154751 2002 604 aa, chain - ## HITS:1 COG:CAC3282 KEGG:ns NR:ns ## COG: CAC3282 COG1132 # Protein_GI_number: 15896527 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 1 600 1 583 584 447 43.0 1e-125 MLKILKRLTAKEVTMLIFAVLFVCLNVYLELKIPDYMSDITTLLSTEGTKVKDIFAWNFD APGMRMVLLSLGSFAASVVVGFLAARIAASFSTRLRDDIFHSVLNFSDAEIKKFSIPSLL TRTTNDITQIQLVFTMGIQVITKGPIMAIWAITKIADKNHEWLLVLIVAVAVMFLMIIFL LMMVMPKQRMIQTLTDKLNSITRESLTGIRVVRAYNAEDYQDAKFAQANDNVTNLNLFIG RSMALLSPVMTGISSGMTLAIYWIGAHLIENIAIPTDPTKIAGAMQDKVDLFSDMVVYSS YAMQVVMGFMMMIVVFFILPRAVVAAGRINEVLETKSSIEYPETNQAKPTEKGSVEFDNV SFRYSKNSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVNLIPRFYDATEGTIKVDGIDV RQYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGESNSSPLDDDKMWEALDLAQGKTFVEM KDGKLKAPVAQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKE RTADMTKLIVAQRISTIMDADQILVLDEGKVVGQGTHEELLANNDVYREIAYSQLSKEEL ENGK >gi|304426198|gb|AEEM01000015.1| GENE 161 154755 - 155195 266 146 aa, chain - ## HITS:1 COG:SP1920 KEGG:ns NR:ns ## COG: SP1920 COG1846 # Protein_GI_number: 15901744 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 6 145 4 141 149 74 35.0 8e-14 MHKKDPFSQFRDFINLMENRVHALAESHGVENLAGPQGFAVMYLRDNPDKEIYIKDIEKR LRISKSVTSNLIKRMEKNGFIQVVSSKEDKRYKQVVLTELGKSKAQDIQDFHDEMHRQIL AGVDHEDLKISFRVFDRILKNLENKE >gi|304426198|gb|AEEM01000015.1| GENE 162 155370 - 155780 331 136 aa, chain - ## HITS:1 COG:SP1549 KEGG:ns NR:ns ## COG: SP1549 COG0242 # Protein_GI_number: 15901392 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pneumoniae TIGR4 # 1 136 1 136 136 182 62.0 2e-46 MIKQIVRDTFFLAQKSEEATKEDLYLAQDLQDTLVANRDNCVGMAANMIGVKKRAIIVNM GGADLVMFNPVLLNKSLPFDTKESCLSLTGARPTRRYQRIEVSFLDKNWNQQTLTLTGLP AQICQHELDHLEGIII >gi|304426198|gb|AEEM01000015.1| GENE 163 155777 - 156286 261 169 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase [Brachyspira murdochii DSM 12563] # 4 166 4 166 166 105 35 2e-21 MVIVRNALASDAEAILAFCQQIGSETDNLSYGEEGVSVSVADEGNLLSEIQKSKTSHFLV AEEAGEIVGTCNCSAFRKKRLAHRAEIGIAVKKAYWNQGIGRQLLTRLIAAAQQSGLKVL SLEVRSDNDRAIHLYDSLGFQKIGTFKHFMEIDDQAIDFDIMELLLEKK >gi|304426198|gb|AEEM01000015.1| GENE 164 156553 - 157902 1848 449 aa, chain - ## HITS:1 COG:lin0569 KEGG:ns NR:ns ## COG: lin0569 COG0334 # Protein_GI_number: 16799644 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Listeria innocua # 4 449 14 458 458 589 69.0 1e-168 MTTGKEYVAGVFDKVKAQNAHEPEFLQAVEEVFESLVPVFDKYPKYIEENLLERLVEPER IVSFRVPWVDDKGQVQVNRGFRVQFSSAIGPYKGGLRFHPSVNQSIIKFLGFEQIFKNSL TGQPIGGGKGGSNFDPKGKSDNEIMRFCQSFMTELSKHIGADTDVPAGDIGVGGREIGYL YGQYKRLRNEYTGVLTGKGLTYGGSLARTEATGYGAVYFAEQMLKARGEDFAGKVALVSG SGNVAIYATEKLQSLGAKVVAVSDSSGYVYDPEGIDVPLLKQLKEVERARIVKYADARPS ATFTPAGEGSIWSIKADLAFPCATQNEINEGDAKALVANGVIAVTEGANMPSTLEAIEVF QKAGVSFGPAKAANAGGVAVSALEMAQNSQRTPWSFEEVDAKLYDIMKGIYDNSAAAAKE FGAEGNLVVGANVAGFLKVAEAMSAQGIV >gi|304426198|gb|AEEM01000015.1| GENE 165 158149 - 158646 414 165 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1294 NR:ns ## KEGG: GALLO_1294 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 165 1 165 165 187 100.0 9e-47 MKRLSLWSGILALLIGIFLFVHPFTTTAMIGWIIALLVFMSGITSLLMYTNSVERSFWYL LQSILSIIFGIILLSSSAMSLSSAVITIAAYWILISGILRLIGGFQMRRAGFYDANRFLS SAVLAILLGLFLLFNPALSAIFIGRLTGLLLMAVGVSGIAFSFRI >gi|304426198|gb|AEEM01000015.1| GENE 166 158703 - 159194 445 163 aa, chain - ## HITS:1 COG:SA0683 KEGG:ns NR:ns ## COG: SA0683 COG0780 # Protein_GI_number: 15926405 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Staphylococcus aureus N315 # 3 163 6 166 166 258 75.0 4e-69 MTRTDEMKDLTLLGNQKTTYTYDYDPSILESFDNRHVDNDYFIKFNCPEFTSLCPITGQP DFATIYISYIPDKLCVESKSLKLYLFSYRNHGDFHENCINTIGKDLIDLLQPRYLEVWGK FTPRGGLSIDPYFNYGKPNTKYEKMADYRLMNHDLYPETIDNR >gi|304426198|gb|AEEM01000015.1| GENE 167 159207 - 159920 529 237 aa, chain - ## HITS:1 COG:BS_ykvL KEGG:ns NR:ns ## COG: BS_ykvL COG0602 # Protein_GI_number: 16078438 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Bacillus subtilis # 8 237 5 243 243 235 49.0 4e-62 MTKRQLTLPILEIFGPTFQGEGRAIGQKTMFVRTGGCDYHCDWCDSAFTWDGSEKPKRMT VDEVIEQLDQLGTYDYVTLSGGNPCLLANNMAELVAKLKARGVTLAIETQGSRWQTWLKD IDQVTLSPKPPSSKMTVNFETLDFIVSQLKKDQITFKIPVFDDADLAFAKMIQKRYQPDV LYLSAGNPEPHASGNIVEHQLDRLRQLWETVAADPEWQSVRVLPQLHTLLYDNQRGV >gi|304426198|gb|AEEM01000015.1| GENE 168 159913 - 160359 402 148 aa, chain - ## HITS:1 COG:PM0185 KEGG:ns NR:ns ## COG: PM0185 COG0720 # Protein_GI_number: 15602050 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Pasteurella multocida # 25 141 4 140 141 89 38.0 3e-18 MFEIPKELKVPTGESLVYCPRRVMVSKEFTFDAAHHLFNYDGKCKALHGHTYCLQIAVSG LLDDRGMAVDFGDLKQIYKKHLEPSLDHHYLNESLPYMNTTAENMVYWIFKQVAQHLPKE REIRVEYVRLYETPTSFAEFRREWEIDD >gi|304426198|gb|AEEM01000015.1| GENE 169 160365 - 161012 486 215 aa, chain - ## HITS:1 COG:BS_ykvJ KEGG:ns NR:ns ## COG: BS_ykvJ COG0603 # Protein_GI_number: 16078436 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Bacillus subtilis # 1 215 1 216 219 323 69.0 2e-88 MKRQSALVVFSGGQDSTTCLFWALKHYDHVETVTFNYGQRHSLEIEVAKHIAAEQGVKNH LLDMSLLGQLTENALTRDIAIENPDDDLPNTFVDGRNHLFLSFAAVLAKRLGITDIITGV CETDFSGYPDCRDAFVKSLNVTLNLAMDYNFVIQTPLMWLDKSETWELADQLGKFDYVRE NTLTCYNGIKGSGCGECPACKLRQAGLEKYLAKKG >gi|304426198|gb|AEEM01000015.1| GENE 170 161253 - 163022 207 589 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 359 572 32 251 329 84 29 4e-15 MSKRNVFLRLWDYLQQYKGALFLAIFLKVFSSVMSVLEPFILGLAITELTANLLDMAHGV AGAHINISYIAMILALYFLRGLGYELGSYWSNYFMTDAVQKSIHDLRRDLSEKINKIPVS YFDSQQFGNVLGRFTSDVETVSNALQQSFLQIINAFLTIFLVICMVLYLNWRLALVVILI IPITYISAQFILKKSQPYFKKQADALGDMNGFVQENLTGFNVIKLYGREEISSEEFREIT QNLQEVGFKASFISGIMMPVLSAISDMAYLIVAVLGALQVLSGNLTVGNMQAFVQYVWQV SQPVQTITQLASILQSAKSSLDRIFEVLDEPEEVADVTEHLTHDLTGQVSFENVSFQYVA DKPLIQNFNLDVKPGEMVAIVGPTGAGKTTLINLLMRFYDVTSGSIKIDGHDIRNLSRQE YRKQFGMVLQDAWLYEASIKENLRFGNLDATDEEVVEAAKAANVDHFIRTLPGGYNMEMN QESSNVSLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMAKLMEGRTSFVI AHRLSTIQEADKILVLNNGQIIEQGNHESLLAAKGFYYDLYNSQFAKSK >gi|304426198|gb|AEEM01000015.1| GENE 171 163025 - 164764 169 579 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 332 547 9 219 309 69 25 1e-10 MKLVWTYLKKYPKWLILDVLGAFTFVVVNLGLPTALARMIDQGITVGNKDKVYFWAIVMF IVIIVGAIGRVTLAYAAGKITTNMIKDMRNDMYDKLQEYSHHEYEQIGVSSLVTRMTSDA FILMQFAEQSLRMGVVTPLMIIFSVVMILVTSPSLAWIVAVAIPFLVLVVYYVATRTRPL SEKQQATLDKINQYVRENLTGLRVIRAFAREDFQEERFDSKNEDYKGISSRLFKLTGLTE PLFVFIIISMIVAIVWFALNPLSRGDLQIGNLVAFIEYSFHALFSFLLFANLFTMYPRVV VSSERISEVMAMPISITPNENGVTETETKGYLEFDKVTFAYPGETESPVLKDISFKAKPG ETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVREYQLKALRQKIGFIPQKALLF TGTIAENLKYGKTDATVDELQEAADVAQAKEFIESRDERYQTHLAEGGSNLSGGQKQRLS IARAVVKKPDIYIFDDSFSALDYKTDAQLRERLKEVTQEATVLIVAQRVGTIMDADQIIV LDKGEIVGRGTHDELMQTNTIYREIANSQLKNADEMKGE >gi|304426198|gb|AEEM01000015.1| GENE 172 164842 - 166713 2110 623 aa, chain - ## HITS:1 COG:SPy0867 KEGG:ns NR:ns ## COG: SPy0867 COG0488 # Protein_GI_number: 15674895 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 621 1 623 625 837 74.0 0 MSDFIVEYLTKSVGDKTVFRDISFIIHDFDRIGIIGVNGTGKTTLLDVISGRLGFDGDVS PFSAKNGYKIAYLTQEPEFDDDKTILDTVLSSDLREMTLIKTYETLMADYNEANQAKLEK VMAEMDSLDAWAIESEVKTVLTKLGLDDLSQKVGALSGGLRRRVQLAQVLLNDADLLLLD EPTNHLDIDTIAWLTNFLKNSKKTVLFITHDRYFLDNVATRIFELANSQLTEYQGNYQDY VRLRAEQDERDAATLHKKKQLYKQELAWMRTQPQARATKQQARINRFNELKADLSGATQS TELEINFETSRIGKKVINFENVSFAYPDKQILTDFNLLVQNKDRIGIVGDNGVGKSTLLN LINGDLQPTAGNLEIGETVRIGYFSQLTKDMDENKRVINYLQEVADEVKTSVGTTSVTDL LEQFLFPRSTHGTLISKLSGGEKKRLYLLKILIEKPNVLLLDEPTNDLDIATLTVLESFL QTFSGPVITVSHDRYFLDKVANKILAFENGRVREFFGNYTDYLDEKAFEENAVVEQAKKA PSQKTEKEKTKKKRMSYFEKQEWEVIEDEIAKLEEDIETIEAQMQENASDYGKLAELQRS LDEANETLLEKYERYDYLSDLAE >gi|304426198|gb|AEEM01000015.1| GENE 173 166710 - 167915 1309 401 aa, chain - ## HITS:1 COG:SPy0866 KEGG:ns NR:ns ## COG: SPy0866 COG0617 # Protein_GI_number: 15674894 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Streptococcus pyogenes M1 GAS # 6 399 1 394 397 502 65.0 1e-142 MKLNNLPSEFQEALPILKKIREAGYEAYFVGGSVRDVLLNRPIHDVDIATSSYPEETKSI FHRTVDIGIEHGTVLVLEEGGEYEITTFRTEDVYVDYRRPSSVSFVRSLEEDLKRRDFTV NAFALDETGLIIDKFNGLADLEAKLLRAVGNPAERFNEDALRIMRGFRFAASLDFDIEPD TFAAMAAHAPLLEKISVERSFIEFDKLLMAPFWRKGIKAMITSQAQKYLPYLENAHDNLQ QLLDDLACDYHFKTSEQAWSALLLALDVKDVRVFLKAWKTSSQFQKDVEKIVAIYRFRLE NELDKMEMYRYGSCLIEQAEALRAGFGLPVDFERIERLDKELTIHDKHEIVVNGGVLIKE LQYKPGPELGRVLKEIEEKIVLGELANDKEAIFDFIRKENK >gi|304426198|gb|AEEM01000015.1| GENE 174 167912 - 168679 1180 255 aa, chain - ## HITS:1 COG:SP1555 KEGG:ns NR:ns ## COG: SP1555 COG0289 # Protein_GI_number: 15901398 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 255 1 255 255 386 76.0 1e-107 MSIKVIIAGFKGRMGSAAVNMVKGDDELTLAALLDPFATESDVDGVPVFTDKSQLVGFDA DVWVDFTMPAVAYENTRFALENGFAPVVGTTGFSEDEIAELIALSEEKKTGGLIAPNFAI GAILLMEFAAKAAKYFPDLEIIELHHDNKKDAPSGTAVKTAELIREVRQPKKQGAADEVE TLKGARGADFDGMRIHSVRLPGLVAHQEVIFGAQGEGLTLRHDSYDRISFMSGVNIGIKA VVKRDKLVYGLEKLL >gi|304426198|gb|AEEM01000015.1| GENE 175 168699 - 169547 742 282 aa, chain - ## HITS:1 COG:SPy0865 KEGG:ns NR:ns ## COG: SPy0865 COG1307 # Protein_GI_number: 15674893 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 280 1 280 282 372 66.0 1e-103 MKLAVITDTTAVLSDDIKQKENLHILDIPIIIGGISYVEGKNLSLDDFYKKMAMSPVLPK TSQPSLAKLDEILSQLSSEGYTHVIGLFLSSGISGFWQNIQFLVDDYPELTIAFPDSKIT CAPLGSMVRNTLNWAEAGMDFDDILAKLQQQIDGTSAFIMVDDLNHLVKGGRLSNGSALI GNLLSIKPILYFNDEGVIEVFEKVRTEKKAIKRLIDVLSEVTVNGDYEVFIIHSRAEEKA QQFYQTLADRGQAENLKIVTFDGVIATHLGEGAVAFGFTPIV >gi|304426198|gb|AEEM01000015.1| GENE 176 169547 - 169927 515 126 aa, chain - ## HITS:1 COG:SPy0864 KEGG:ns NR:ns ## COG: SPy0864 COG4835 # Protein_GI_number: 15674892 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 126 1 126 126 179 78.0 1e-45 MELVREKEFVNQYHYDARNLEWEKKNGTPKTNFEVTFQLVKKDTENNQTTIVSVLQFMVV KKEFVISGVVSQMVHIKNRIVNEPSEFTKEEVENLAAPLLDIVQRLTYEVTEIALDRPGI KLEFRN >gi|304426198|gb|AEEM01000015.1| GENE 177 170056 - 170829 754 257 aa, chain - ## HITS:1 COG:L111003 KEGG:ns NR:ns ## COG: L111003 COG3548 # Protein_GI_number: 15672091 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Lactococcus lactis # 2 187 123 303 331 84 27.0 2e-16 MKQLKERFDALSDAIVAIVMTILVLEIAVPATTKELPYLLEEIALFLVSFVIIINFWYRR FQAMRATETTTFRTFVMDVIAHAILSLYPLATKMLVEFNIKWIAIIFFGGINLATAFLIN RMTYELAMQTIKNLVDKDDERTHMLNDWLKRRTLVSLISDIVMMLIALCFNTVGVYIYIL TPFLEFIGNFKRGRVMEAAFHEGQTFKEIVEHRAAVENLQERHENIKQRQQIHRQEVAER HAEHQKRHSKNHKSKKH >gi|304426198|gb|AEEM01000015.1| GENE 178 170885 - 171457 484 190 aa, chain - ## HITS:1 COG:SPy0857 KEGG:ns NR:ns ## COG: SPy0857 COG1705 # Protein_GI_number: 15674890 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 32 188 36 192 235 169 64.0 2e-42 MSLLAVLACVALVIFTYQAQDADSTATADTTSSTTISDQITINFIESIGESARQIAAQND LYASVMIAQAILESNSGQSALSQAPNYNFFGIKGDYNGQSVTMKTWEDDGSGNAYTIDAK FRSYGSQAESLEDYAQFLQKDIYAGVHRSNTTSYKDATAALTGTYATDTSYGTKLNRLIE QYGLTVYDSW >gi|304426198|gb|AEEM01000015.1| GENE 179 171945 - 173708 2246 587 aa, chain - ## HITS:1 COG:CAP0106 KEGG:ns NR:ns ## COG: CAP0106 COG1154 # Protein_GI_number: 15004809 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 1 582 1 582 586 665 54.0 0 MVLETISSPQDLKQLSREDLHRVVDEARQALLEKTSQHGGHNGPNFGMVEMTVAMHYVFN SPIDKFIFDVSHQSYVHKMLTGRAQAFLDPAHYDDVSGYTNPKESEHDLFTVGHTSTSLS LASGVAKARDLKDEAYNVVAVIGDGSLSGGMAYEGLNQIATEGTNTIVVINDNDQSIAVN PTGGIYTALRDLRESNGQADNNLFKALGFDYHYLDAGNNLDQLIALFEEVKDASHPVLLH IHTQKGHGVSFMEENREAFHAGGPYNPETGEYLGGAGAAETYNSITTDFVLDKIKNDSTV VAVNAGTPMFMLSQDQRKQAGKQFVDVGIAEEEAATMSAGLAKNGAKPVWYVASTFMQRT YDQWSHDIALNNLPVTALVYMASVSSLNDESHLGFFDIPFLAHIPNVVYLAPTSKEEHLA MLDWAIEQKEHPVAIRIPVGPLREIGIADTTDYSILNKNQVTQKGSQVALFGLGNFYGLA EEVAKELADKHGITATIVNPKFITGLDEELLDSLEAEHQVVVTLEDGILEGGYGQMIASY LGDTELKVQNYGVEKAFHDRYNAQELLAENGITVENIVNNVLKNLAE >gi|304426198|gb|AEEM01000015.1| GENE 180 173888 - 174358 522 156 aa, chain - ## HITS:1 COG:YPO2003 KEGG:ns NR:ns ## COG: YPO2003 COG0716 # Protein_GI_number: 16122245 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Yersinia pestis # 11 132 83 200 235 77 31.0 1e-14 MSKSLIIYFSITGNTKRVAQQMARKIGADLYQIDVENPYTSKDLDWIIPNCRANVEQKDS ASRPAYHGKLPDISQYDTVIFGHPIWWGIPPRIIYTVIEALDLTGKKVASFATSGGSTYS DAQIEMDNLLKNPVKGRILSSETSINSWLADNGLIS >gi|304426198|gb|AEEM01000015.1| GENE 181 174450 - 175067 932 205 aa, chain - ## HITS:1 COG:L119013 KEGG:ns NR:ns ## COG: L119013 COG0702 # Protein_GI_number: 15673091 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Lactococcus lactis # 1 205 1 209 211 177 46.0 9e-45 MKIFVAGSTGRVATELLKKLSAKNYQVIAGARRPEAVVELPNVTPQKMDLHASVDNIAEL LKGADVVVFAAGSRGKDLLQTDAYGAVKLMQAAKKAGITRFVMLSALYSLTPDKWPDNLT DYYIAKFFADNYLVNQSGLDYTIVQPGNLLEEAGQGHIALGDKGFTAISIEDVASVLAEI VDKPSTFKRVIAINPGSTAISQLFD >gi|304426198|gb|AEEM01000015.1| GENE 182 175088 - 175885 774 265 aa, chain - ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 4 261 6 269 286 240 48.0 2e-63 MQYVTLNTGTQMPQLGFGVYQIPEKETERIVSLAIKTGYRHIDTAQYYRNEVGVGQAIKA SGLPRENFFITTQLATSGYRATKAQIAQALKNLQTDYIDLMLIHWVVSDYEGTYQALQEA YQAGQLKAIGLSNFNQEQIKGILAKFSVKPAVLQNEMHVFQQQVAMRQFCHKNDIQFESW APFGEGKENIFNHPLLTTIGSQYHKTAAQVILRFLLQEGVVAIPKSANSERMKENFEVFD FELSAKDMEAIRQLDRGHGLFGWNE >gi|304426198|gb|AEEM01000015.1| GENE 183 175934 - 176920 1286 328 aa, chain - ## HITS:1 COG:lin2113 KEGG:ns NR:ns ## COG: lin2113 COG0667 # Protein_GI_number: 16801179 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Listeria innocua # 1 328 1 327 331 400 59.0 1e-111 MEYTKLGNTGLEVSKLCLGCMSFGDASLGFHSGWLLDEEKSRIIIKKALDLGINFFDTAN VYGKGTSEEYLGRALRDFADRDEVIIATKVFFGDGLHEGRNTTGLSRKAIFSQVEASLKR LGTDYIDVLYIHRWDYNTPIEETMSALNDLVRSGKVHYLGASAMYAWQFQKAQYVAEKNG WTKFSVMQNHYNMLYREDEREMIPFCKDSGVGLAPYSPLAAGRVVRDWDADTARSKTDET AKMKYDSTEEQDKAIVARVAEVAEKYGVTRAQVALAWLWQKGIDSPIVGVTKEKYLDDFM GAIDVTLTNDDMAYLDENYLPHKIVGAL >gi|304426198|gb|AEEM01000015.1| GENE 184 177055 - 178182 780 375 aa, chain - ## HITS:1 COG:SA0341 KEGG:ns NR:ns ## COG: SA0341 COG4292 # Protein_GI_number: 15926054 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 4 311 10 311 377 113 29.0 7e-25 MTLIKHKKVELTELFYDLVFVYAISQITTLIHHVHHGIVIPYAFFTFVIALIIFVNSWMV QTVFTNRFGQNSLTNILFMFAQMLCLLISSTAVTEEWSTSFVPFILPMAFISLLLLLQYV IEYFNTKAEADRDLIRQYFYILGIRSLTLFVSIFLPYQFGLILAVSGVLLTWILPGILTN PKQGHVSEKTRAINFPHLVERLSLLVIITFGEMIIGIAPYFSVDNLSVASFLIFIIVTNL FMIYIVEIDHMIDVNQDRVTGNGAIYYHYPIFLGLSLITVSLSFIGNQAANNLFSICLLY LGILLLLFGVFAHQHYNKSSHQFTNKLYWVEFGMPILGLLLSFLTLQSAFALIAIACLVT LIMMIVMISFNLKRI >gi|304426198|gb|AEEM01000015.1| GENE 185 178389 - 180245 1979 618 aa, chain - ## HITS:1 COG:BH1629_2 KEGG:ns NR:ns ## COG: BH1629_2 COG0685 # Protein_GI_number: 15614192 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Bacillus halodurans # 289 608 1 321 335 327 47.0 3e-89 MSRLLERLKTDILVADGAMGTLLYANGLDNCYEAYNLTHPDKISAIHHAYLEAGADIIQT NTYAAKRHRLKGYAYDDQVKKINQAGVKIAREAAGDDAFVLGTVGALRGLKQCDLTLDEI IEETLEQVGYLIETNQIDGLLFETYYDEEEIIEVLKAVRPITDLPIITNIALHEAGITEN GRPLVEILGKLVMLGADVVGLNCHLGPYHMIKSLKQVPLFAQSYLSVYPNASLLSFVDDN GSGQYGFSQNADYFGKSAELLVAEGARLIGGCCGTTPDHIRAVKRAVKGLKPVERKFVTP MVEEAELIKAAKQSETLVDRVKREVTIIAELDPPKTLDIAKFTEGVKALDKAGISAITLA DNSLAKTRICNVSIAALLKNEISTPFLLHLSCRDHNMIGLQSRLLGMDVLGFNHVLAITG DPSKIGDFPGATSVYDATSFKLLALIKQLNKGQGYSGASIKKETNFTAAAAFNPNVKNLS RCGRLIERKVAAGADYFITQPVFNTEIIDELADLTRDYEAPFFVGIMPITSYNNAIFLHN EVPGIQLSDEFLAKLEVVKDDKETCQKLALEESKQLIDRALEHFNGIYLITPFMRYDLTV ELIDYIHQKVELKNQRIS >gi|304426198|gb|AEEM01000015.1| GENE 186 180259 - 182493 2902 744 aa, chain - ## HITS:1 COG:SA0344 KEGG:ns NR:ns ## COG: SA0344 COG0620 # Protein_GI_number: 15926057 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Staphylococcus aureus N315 # 2 739 4 740 742 813 58.0 0 MVKVSNLGYPRLGENREWKKLIESYWAGDISQEELQAQAKDLRLEFLKKQADAGLDFIPV GDFSLYDHILDLSVQFGVIPKRFAKEEINLDLYFAIARGNKDNVASSMKKWFNTNYHYIV PEWSGVKPQLTNTRLLDLYLEAKEVVGDKAKPVITGPITYVALSSEVDDFTAAVKKLLPL YKQVFAELVEAGATYIQVDEPIFVTDEGADLLEAAKYVYAYFAKEVPEAKLIFQTYFEAL IDAKDLSELPVAAFGLDFVHGLDENLEAIEAGYFTAKDVFAGVVDGRNIWATDFVKTSAL LEKIQANVKTLVVQPSCSLLHVPVTTKNETELEPVLKNGLAFADEKLQEIKLLSQRLDGE ESDTYKQHVADFDALQAADFRNVTLENLDDVATERVDYKVRRQVQQEKLGLPILPTTTIG SFPQSPEVRRTRLAWKRGNISDAEYEDFIKSEIARWIKIQEDLDIDVLVHGEFERVDMVE FFGQKLAGFTTTKLGWVQSYGSRAVKPPIIYGDVKHIQPLTVKETVYAQSLTDRPVKGML TGPITITNWSFERSDISRADLFNQIGLAIKDEIKLLEDAGIAIIQVDEAALREGLPLRKS KQQAYLDDAVHAFHVATSSVKEETQIHTHMCYSKFNEIIDSIRALDADVISIETSRSHGD VIESFETAVYPLGIGLGVYDIHSPRVPTKEEVIANIERPLRQLSLEQFWVNPDCGLKTRR EPETVAALEVLVAATKEVRAKYGK >gi|304426198|gb|AEEM01000015.1| GENE 187 182711 - 184681 2686 656 aa, chain - ## HITS:1 COG:SPy0855_3 KEGG:ns NR:ns ## COG: SPy0855_3 COG1299 # Protein_GI_number: 15674888 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Streptococcus pyogenes M1 GAS # 295 654 1 358 360 479 77.0 1e-134 MKIQDLLRKDVMILDLKATSKEAAIDEMITSLVEHGVVTDFDTFKQGIMNREAQTSTGLG DGIAMPHSKNAAVKEATVLFAKSAAGVDYEALDGQPTYLFFMIAAPDGANDTHLAALAEL SKYLLKDGFADQLRQVTSADEVIATFNAAEEDNKAKEESKAAPVSDDKPLIVAVTACTTG IAHTYMAEEALIKQGDEMGVTVRVETNGASGVGNRLTADEIARAKGVIVAADKAVEMARF DGKPLVSRPVADGIKKSEELINIILDGKAETYTASADEASSSSDASEKLSLGAAFYKHLM SGVSQMLPFVIGGGILIAISFLIDQFMGVPNDQLSHLGNYHEIAAVFNQLGNAAFGFMIP VFAAYIAYSIAEKPGLVAGFTAGAMATSGIAFGRISFYSLDSAVNLADNQIASGFLGALV GGFLAGGVILVLKKALAFLPKSLEGIKSILLYPLLGVLVTGFLMLFINIPMAAINSALYD FLDSLSGSSAIILGLILGGMMAIDMGGPFNKAAYVFGTSSLTAAALSNGGSVVMAAVMAG GMVPPLAVFVATRLFKDKFTAEERDAGLTNIVMGLSFITEGAIPFGAADPARAIPSFMVG SAVTGALVGAFGIKLMAPHGGIFVFALTSNWILYLVAIVIGAIVSGLLFGALRKAK >gi|304426198|gb|AEEM01000015.1| GENE 188 184678 - 185589 1308 303 aa, chain - ## HITS:1 COG:SP0876 KEGG:ns NR:ns ## COG: SP0876 COG1105 # Protein_GI_number: 15900759 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Streptococcus pneumoniae TIGR4 # 1 302 1 302 303 447 76.0 1e-126 MIYTVTLNPSIDFIVRLDSLALGSVNRMTSDDKFAGGKGINVSRILKRLDIENTATGFIG GFTGRFVKDGLVDEGIATKFVEVSEDTRINVKVKAGEETEINGAGPHISTEKLEELEAIL AGLSSEDTVVFAGSAPSSLGNQVYNTLIPIAKKAGAEVVCDFEGQTLLDALNYQPLLVKP NNHELADIFGVELNGLADIEKYAREILAKGAKNVIISMAGDGALLVTPEAAYFAKPIKGT VKNSVGAGDSMVAGFTGEYVKSGDPIEALKWGVACGTATTFSDDLATAEFIKETYQKVEV EKI >gi|304426198|gb|AEEM01000015.1| GENE 189 185586 - 186299 632 237 aa, chain - ## HITS:1 COG:SPy0853 KEGG:ns NR:ns ## COG: SPy0853 COG1349 # Protein_GI_number: 15674886 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 237 1 237 237 273 62.0 1e-73 MEKLSHDKFVNLEDLVSMLDTSESTVRRDLDELESERKLHRVHGGAELPHSLQEEFTNQQ KSIKNIQEKMLVAQKAADLIADNEVIFIDAGTTNELLLNYLSQDNLTVVTNSIHHAAKLV DKNIQTIIIGGHVKKATDASIGTVAYEQIKQLNFDKAFLGINGVDEQFLTTPDVEEAVIK KTVIENARKTFIVTDSSKIGHISFAKVDKVENVTIITNQSSGALMKKIKEKTRVIEV >gi|304426198|gb|AEEM01000015.1| GENE 190 186590 - 187600 257 336 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 7 303 1 292 306 103 29 6e-21 MSENREIYDITVIGGGPAGLFAAFYAGMRGVSVKIIESLSELGGQPAILYPEKAIYDVAG FPEITAAELTENLIKQLERFEDQTTICLKEEVKTFEKEGDVFTIETNKGQHFSRAIVIAC GNGAFAPRTLGLEGEEEYADNNLFYNVHKLDQFAGKDVVICGGGDSAVDWANHLDGLAKS VTIVHRRDAFRAHEHSVEVLKQSNVKIMTPYVPVALDGDGQFANRLTIQKVKSDETVELP LDALIVSFGFSTSNKNLKNWNVDYKRSSITVSPLFETSQEGVYAIGDAADYEGKVALIAS GFGEAPTAINQAIKYIYPDRDNRVVHSTSLIKDKEK >gi|304426198|gb|AEEM01000015.1| GENE 191 187601 - 188113 580 170 aa, chain - ## HITS:1 COG:MA3535 KEGG:ns NR:ns ## COG: MA3535 COG2320 # Protein_GI_number: 20092342 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 6 170 21 185 186 147 46.0 8e-36 MRTEEVIVLSYQESWKDDFEKITQELRAVLGELAIRIEHVGSTAVEGIAAKPIIDIDVVI AQETDLSMVVEKLASIGYVHEGNLGIEGREAFAYSGKEHLQCHHLYVCPKNSLELKRHLA FRDYLRSHPDAVAIYGATKMKAAQLFPKNIESYMAYKASVIEEIYKELEK >gi|304426198|gb|AEEM01000015.1| GENE 192 188165 - 188902 885 245 aa, chain - ## HITS:1 COG:SP0779 KEGG:ns NR:ns ## COG: SP0779 COG0336 # Protein_GI_number: 15900673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 239 1 239 239 397 81.0 1e-110 MKIDILTLFPEMFSPLEHSIVGKATEKGLLEINYHNFRENAEKARHVDDEPYGGGQGMLL RAQPIFDTIDKIDAKKPRVILLDPAGRKFDQSYAEELAQEDELIFICGHYEGYDERIKTL VTDEISLGDFVLTGGELAAMTIVDATVRLIPNVLGKEASHQDDSFSSGLLEFPQYTRPYD FRGMKVPDVLMSGHHENIRKWRIEQSLRKTLERRPDLLENYVFSKEEEAIFRKILAEKDA KAKNM >gi|304426198|gb|AEEM01000015.1| GENE 193 188892 - 189410 619 172 aa, chain - ## HITS:1 COG:SP0778 KEGG:ns NR:ns ## COG: SP0778 COG0806 # Protein_GI_number: 15900672 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Streptococcus pneumoniae TIGR4 # 1 172 1 172 172 274 81.0 7e-74 MNYFNVGKIVNTQGLQGEMRVLSVTDFTEERFKKGSKLAIFDDKDRFIIEVEIASHRKQK NFDIVKFKGMYHINDIEKYKGCTLKVAEENLSDLDDGEFYYHEIIGLDVYENDVLIGQVK EILQPGANDVWVVKRKGKRDLLLPYIPPVVLNVDVAGNRIDVDVLEGLDDED >gi|304426198|gb|AEEM01000015.1| GENE 194 189853 - 190002 142 49 aa, chain + ## HITS:1 COG:no KEGG:SDEG_0066 NR:ns ## KEGG: SDEG_0066 # Name: not_defined # Def: putative transposase # Organism: S.dysgalactiae # Pathway: not_defined # 1 48 1 48 107 63 68.0 2e-09 MQDYYTPKGKLLTLADRRNIKRWLKEGHSNREIARRLAKAPQPPTSKSH >gi|304426198|gb|AEEM01000015.1| GENE 195 190112 - 190360 270 82 aa, chain - ## HITS:1 COG:SPy0841 KEGG:ns NR:ns ## COG: SPy0841 COG1837 # Protein_GI_number: 15674876 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Streptococcus pyogenes M1 GAS # 1 79 1 79 79 132 97.0 2e-31 MDTIENLIIAIVKPLISQPDNLTIKIEDTPEFLEYHLDLDAQDIGRVIGKKGRTITAIRS IVYSVPTQGKKVRLVIDEKGEE >gi|304426198|gb|AEEM01000015.1| GENE 196 190385 - 190657 452 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55821524|ref|YP_139966.1| 30S ribosomal protein S16 [Streptococcus thermophilus LMG 18311] # 1 90 1 90 90 178 97 2e-43 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVEENQVTLKEDRVLEWL SKGAQPSDTVRNILSREGVMKKFHESKFSK >gi|304426198|gb|AEEM01000015.1| GENE 197 190811 - 191194 470 127 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1326 NR:ns ## KEGG: GALLO_1326 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 127 1 127 127 222 97.0 3e-57 MKKRIMLPIIGALAIVSVGTAKTIVSDELTALLPKTAAEPITLQLAVEEYQKDNSFVEFL DTYCSDTDFVIGYPDEVGGGFSFKDEASSAAEPLVGELLDDDGNVVYRDDQAVTVAEIKE AILQSQQ >gi|304426198|gb|AEEM01000015.1| GENE 198 191209 - 191616 483 135 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1327 NR:ns ## KEGG: GALLO_1327 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 135 1 135 135 239 95.0 3e-62 MKRKAVFSLMLLACLVTGILGMNQIKNKDVVADDVQVKSCETSSDNATINRLIKVWKGKS REAFDNYFADYSDEQRIIADEEGGILAYADGYGDEEESQNSYIQYEDGTVHELDLEGSES TTVGEARQVLYQYLK >gi|304426198|gb|AEEM01000015.1| GENE 199 191806 - 192555 499 249 aa, chain - ## HITS:1 COG:BH2367 KEGG:ns NR:ns ## COG: BH2367 COG0500 # Protein_GI_number: 15614930 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Bacillus halodurans # 5 248 3 255 256 120 30.0 3e-27 MIIAITTSLRENVALRQRAQAIGEKLHLPVIERRKQSVTKLLQSREALLLVYENELRLVN QDGSEFVFHPDTAMLRIKSEHDALLALLGDDKLQILDTTMGLASDSIVMASAGNDVTAIE SNPLIHFIVSEGLVTYPSENQRLTAVMRSIKTYCADNITYMKSLPDKSFDVVYCDPMFSD RISESKNLDGLRQFANPSPLSDEFLREAKRMARKSLIIKAHFRDDVFEKFGFKRIVRPNQ KFHYGIIEL >gi|304426198|gb|AEEM01000015.1| GENE 200 192574 - 193164 444 196 aa, chain - ## HITS:1 COG:L114884 KEGG:ns NR:ns ## COG: L114884 COG0398 # Protein_GI_number: 15672877 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 5 196 9 201 201 132 40.0 5e-31 MYDALKRVIKFLGIFSIILTLLCLVYLFKHLDILNNPHALADVLRGHLFLGSIIFLLLQI IQVVIPIIPGGVTTVVGFMAFGPILGFILNYVGIVIGSIILFLLTRRYGKPFILLFMEEK LFARYERKLTSSTYEKVFALNMASPISPADILVMVTGLSKMAFRRFLYIILLCKPISIVA YSYFWIYGGHFIKSFL >gi|304426198|gb|AEEM01000015.1| GENE 201 193247 - 194479 339 410 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 2 410 7 413 413 135 26 2e-30 MENWKFALSSIMGHKMRSFLTMLGIIIGVASVVVIMALGQGMTKQITDMFSADTRDIEIY YVAKDSDSKSIFDDDVETTSSDKGPKIQEEWLQKITSDVSGVQNYYLTNGTTATVSLNKK KAKNVNIIGVNKTYFDVKKYKVVAGRNFRSDDYEHFSRIIMLDTKLAVKLFGTNDNALNK QVSVGSKSYLVVGVYKDPNAGSALYGMSSGGNAVMTNTQLAAEFNVNEIEAAYVHVNDAT QATTVGEEAAKVMTQVSGVKTGHFTIFDMSKQIAEINSAYGMMTTVIGAIAGISLLVGGI GVMNIMLVSVTERTREIGLRKALGATRRKILTQFLIESMVLTLLGGLIGLGLAAGLTSIL NSNMADMKPSISFNVAIGSLLFSALIGMIFGILPANKASKLDPIEALRYE >gi|304426198|gb|AEEM01000015.1| GENE 202 194491 - 195201 338 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 11 230 7 219 311 134 37 3e-30 MTEERKVLIQLKDIVKSYRNGDQELQVLKGIDLTVYEGEFLAIMGPSGSGKSTLMNIIGL LDRPTSGDYSLNGTQVEDLKEKELAKVRNEEIGFVFQQFFLLSKLNALQNVELPLIYAGV GVSKRHQLAKQFLDKVELGERMKHLPSELSGGQKQRVAIARALVNNPSIILADEPTGALD TKTSEQIMQLLTELNREGKTIVMVTHEPEIADFATRKIVIRDGEITRDTTDSVRID >gi|304426198|gb|AEEM01000015.1| GENE 203 195201 - 196430 1643 409 aa, chain - ## HITS:1 COG:SPy0836 KEGG:ns NR:ns ## COG: SPy0836 COG0845 # Protein_GI_number: 15674871 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Streptococcus pyogenes M1 GAS # 1 406 1 411 423 383 62.0 1e-106 MPRRSKAKMSKKTKGIIGAAAACFVVAGAALLWWQQTKTSESTVETTYDTTAVTEGTISS STLLTGTVKAFQEQYVYYDSSKGTEARPTVSVGDQITTGQQLVQYDTTTAQAAYDTAVRN LNKVGRQINYLKTYGNLPTTSTTTDEETGEETTVTTPPTAQENAQYNQQLQDLNDSYADA QAEVNKAQQALNETVIVSDVSGTVVEVNNDIDPSSKNSQTLVHVATEGQLQIKGTLTEYD LANIKTGQNVKIKSKVYPDQEWTGTISYVSNYPNQSDDSSGTGGSSSSSGSASYDYKVDL TGDISNLQQGFTVSVEVVNENKNKLVPVDAVVNEGDKNYVWVYDKDSQKASKIEVTLGSA DAKQQEILSGLEVGQIVISNPDSSLKDGEKVSNVTSDDTATAEESEVSE >gi|304426198|gb|AEEM01000015.1| GENE 204 196423 - 196533 56 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKDGFYILFLTVKCQKRIIVLSQQYNYTKEKEEDYA >gi|304426198|gb|AEEM01000015.1| GENE 205 196675 - 199854 4327 1059 aa, chain - ## HITS:1 COG:SP1275 KEGG:ns NR:ns ## COG: SP1275 COG0458 # Protein_GI_number: 15901135 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Streptococcus pneumoniae TIGR4 # 1 1059 1 1058 1058 1855 87.0 0 MPKRTDIKKIMVIGSGPIIIGQAAEFDYAGTQACLALKEEGYSVVLVNSNPATIMTDKEI ADQVYIEPLTLEFVTRIIRKERPDALLPTLGGQTGLNMAMELSRAGILDELGVELLGTKL SAIDQAEDRDLFKQLMEDLNQPIPESEIVNTVDEAVAFAESIGYPVIVRPAFTLGGTGGG MCDNEEELREIAENGLKLSPVTQCLIERSIAGFKEIEYEVMRDAADNALVVCNMENFDPV GIHTGDSIVFAPTQTLSDIENQMLRDASLSIIRALKIEGGCNVQLALDPNSFKYYVIEVN PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMVNPVTGTTYAMFEPALDYVVAKIPRF PFDKFENGERRLGTQMKATGEVMAIGRNIEESLLKACRSLEIGVYHNEMADLAEVSDDEL VNKIVRAQDDRLFYLSEAIRRGYTIEELSKLTKIDLFFLDKLLHIFELEQELVSHVGDIA VLKEAKRNGFADRKIAELWNMTADDVRAIRTENKIIPVYKMVDTCAAEFESATPYFYSTY EWENESVKSDKESIIVLGSGPIRIGQGVEFDYATVHSVKAIQAAGYEAIIMNSNPETVST DFSISDKLYFEPLTFEDVMNVIELEQPKGVIVQFGGQTAINLAEPLSKAGVTILGTQVAD LDRAEDRDLFEQALKELDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGGRAMEIV ENEEDLRSYMRTAVKASPDHPVLVDSYIVGRECEVDAISDGKDVLIPGIMEHIERAGVHS GDSMAVYPPQTLSKKIQDTIADYTKRLAIGLNCFGMMNIQFVIKDETVYVIEVNPRASRT VPFLSKVTNIPMAQVATKLILGQTLADLGYEDGLYPESDYVHVKAPVFSFTKLAKVDSLL GPEMKSTGEVMGSDQTLEKALYKAFEASYFHLPSFGNVVFTVSDDTKEEALGLAKRFANI GYSIFATQGTAKYFAENGLMSTIVNKLGEDDENDIPALVRTGKVQAIVNTVGTKRTLDED GATIRSSAIEHGIPLFTALDTADAMIRVLESRGFTTQAI >gi|304426198|gb|AEEM01000015.1| GENE 206 200023 - 201111 1344 362 aa, chain - ## HITS:1 COG:SPy0833 KEGG:ns NR:ns ## COG: SPy0833 COG0505 # Protein_GI_number: 15674869 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Streptococcus pyogenes M1 GAS # 1 356 1 356 360 657 86.0 0 MAKRLLILEDGTIFEGKAFGADLDVTGEIVFNTGMTGYQESITDQSYNGQILTFTYPLVG NYGINRDDYESITPTCKGVVVSENARRANNWRNQMTLDEFLKAKNIPGISGIDTRALTKI IRKHGTMKATLASGGDSIEHLQVQLQATVLPTNNIEQVSTKTAYPAPGVGKNIVLVDFGL KHSILREFSKRDCNVTVVPYNITAEEILHLNPDGVMLSNGPGNPEDVLEALDMIRGVQGK IPIFGICMGHQLFSLANGATTYKMKFGHRGFNHAVREIATGRIDFTSQNHGYAVDRDTLP DCLMVTHEEINDKSVEGVRHRDFPAFSVQFHPDAAPGPHDASYLFDDFLELIDAFQAEKA RN >gi|304426198|gb|AEEM01000015.1| GENE 207 201190 - 202116 985 308 aa, chain - ## HITS:1 COG:SPy0832 KEGG:ns NR:ns ## COG: SPy0832 COG0540 # Protein_GI_number: 15674868 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Streptococcus pyogenes M1 GAS # 1 307 1 307 311 449 70.0 1e-126 MAVTDGVVSLKHLVTMETLSNEEVLGLIRRGMAFKTNKADFSLDRQYFAANLFFEPSTRT HKSFEVAERKLGLDVIEFDAKTSSVNKGETLYDTILTMSSLGIDICVIRHSMEDYYKELI DSRTIQTAIVNGGDGSGQHPSQCLLDLMTIYEEFGGFENLKVAIVGDITHSRVAKSNMQI LKRLGAELYFAGPEQWYSSEFDVYGKYVAIDDIVDKVDVMMMLRVQHERHDSERGFSKET YHKTYGLTAERYEKMKTSAIIMHPAPVNRDVEIADQLVEAPKSRIATQMQNGVFVRMAIL EAVLNGKA >gi|304426198|gb|AEEM01000015.1| GENE 208 202121 - 203383 1022 420 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 20 419 19 421 447 398 50 1e-109 MENVKYDVHDMPKPGMLFGLSFQHLFAMFGSTVLVPILVGIDPAIALFSSGLGTLAHLTV TKYKIPAYMGSSFAYIATMQMLMKTDGIAAVAQGAIAGGLVYLIVALIVKFAGNAWIDKV LPPIVVGPIIIVIGLSLATTAVDDVMLKNGEYNFTYLLIGMVTLLAVILFNMYGKKIIGV IPILLGLIVGYIFALIVGAVTGQTIVDLSDVAKSAWFQVPSFDILFVDYHFKLYPSAILT MAPIAFVTMTEHFGHVMVLNSLTGRDFFKDPGLDRTLTGDGIAQIIAGFFGAPPVTSYGE NIGVMALNKIYSVYVIAGAAVIAVVMSFIGKISALLSSIPTPVIGGISIALFGVIASSGL KILVENKIDFDNKKNLLIASVILVSGIGGLTLQVAGLQITGVAFSTLLGIILYQILPEKD >gi|304426198|gb|AEEM01000015.1| GENE 209 203415 - 203936 839 173 aa, chain - ## HITS:1 COG:SPy0830 KEGG:ns NR:ns ## COG: SPy0830 COG2065 # Protein_GI_number: 15674866 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 173 1 173 173 245 89.0 3e-65 MKTKEIVDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFIARRIQDRLKQLEGID IPIGELDTKPFRDDMKVEEDTTDMPVDITGKDVILVDDVLYTGRTIRAAIDNLVSLGRPA RVSLAVLVDRGHRELPIRADYVGKNIPTSAVEEIIVEVIEVDGKDRVSIVDPS >gi|304426198|gb|AEEM01000015.1| GENE 210 204191 - 205087 365 298 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 66 277 73 275 285 145 41 2e-33 MELIIKEAGVRLDKALADLTELSRSQANDEIKKGTVLVNGKAVKAKYAVKVGDVVTYEVP KEEVLEYTAENIPLDIIYEDDDVAVVNKPQGMVVHPSVGHTSGTLVNALMYHIKDLSSIN GVIRPGIVHRIDKDTSGLLMIAKNDKAHNALAAELKDKKSLRKYVAIVHGNIPNDRGVIE APIGRSEKDRKKQAVTAKGKPAVTHFKVLERFGNYTLVELTLETGRTHQIRVHMAYIGYP VAGDPLYGPRKTLKGDGQFLHAQTLGFTHPTTGETLTFTAEAPAIFKETLENLRNGKA >gi|304426198|gb|AEEM01000015.1| GENE 211 205071 - 205544 424 157 aa, chain - ## HITS:1 COG:SPy0826 KEGG:ns NR:ns ## COG: SPy0826 COG0597 # Protein_GI_number: 15674864 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Streptococcus pyogenes M1 GAS # 4 154 1 151 152 170 60.0 9e-43 MKTLRKVYFPLAAVVLIVLDQLSKLWIVNHITLDTIQECLPGIFSLTYLRNYGAAFSILQ NQQWLFAVITFAVVGAACYYFVKNINGQFWFLLGLILIISGGLGNFIDRVRLGYVVDMIH LDFMNFAVFNMADSYLTVGVVILFIALWKEEENGVNH >gi|304426198|gb|AEEM01000015.1| GENE 212 205541 - 206458 972 305 aa, chain - ## HITS:1 COG:SPy0824 KEGG:ns NR:ns ## COG: SPy0824 COG0583 # Protein_GI_number: 15674863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 304 1 304 304 453 74.0 1e-127 MNIQQLRYVVAIANSGTFREAASKLFVSQPSLSVAIRDLEGELGFQIFTRTTTGAVLTSH GMTFYEKALEVVKSFDSFEKQFSQAAADSDEFSIASQHYDFLPPLITAFSQAHPEHKDFR IFESTTIQILDEIAQGDSEIGIIYLNNQNRKGLLQRMEKLGLEFVELIPFQTHIYLAKEH PLAKKDSLVMADLLGFPTVRFTQEKDEYLYYSENFVDTTDSSRIFNVTDRATLNGILERT DAYATGSGFLDSRSVNGITVIPLEDDLDNKMVYIKRRDKNLSACALKFIAVMKDYFAKFS PKVTK >gi|304426198|gb|AEEM01000015.1| GENE 213 206680 - 206973 495 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15674862|ref|NP_269036.1| 50S ribosomal protein L27 [Streptococcus pyogenes M1 GAS] # 1 97 1 97 97 195 98 2e-48 MLKMNLANLQLFAHKKGGGSTSNGRDSQAKRLGAKAADGQTVSGGSILYRQRGTHIYPGV NVGRGGDDTLFAKVEGVVRFERKGRDKKQVSVYPIAK >gi|304426198|gb|AEEM01000015.1| GENE 214 206995 - 207330 287 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157150851|ref|YP_001450118.1| ribosomal protein [Streptococcus gordonii str. Challis substr. CH1] # 1 109 1 111 114 115 54 2e-24 MIQATFIRHKDNLESVELTGHAGSGEYGFDIVCAAVSTLSINLVNSLEALADCNADLAIN EIDGGYMKIDISHVTKKTDEKVQLLFESFLLGMTNLAENSQEFVSVQVIAN >gi|304426198|gb|AEEM01000015.1| GENE 215 207343 - 207657 514 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15674860|ref|NP_269034.1| 50S ribosomal protein L21 [Streptococcus pyogenes M1 GAS] # 1 104 1 104 104 202 97 1e-50 MSTYAIIKTGGKQVKVEVGQAIYVEKLDVEAGSEVTFNEVVLVGGDKTVVGTPVVEGATV VGTVEKQGKQKKVVTFKYKPKKGSHRKQGHRQPYTKVVINAINA >gi|304426198|gb|AEEM01000015.1| GENE 216 207741 - 207776 55 11 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|77412091|ref|ZP_00788416.1| ribosomal protein L21 [Streptococcus agalactiae CJB111] # 1 11 147 157 157 25 90 6e-58 TIFVRLHRMCI >gi|304426198|gb|AEEM01000015.1| GENE 217 207852 - 208397 590 181 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1344 NR:ns ## KEGG: GALLO_1344 # Name: not_defined # Def: putative acetyltransferase (GNAT) family # Organism: S.gallolyticus # Pathway: not_defined # 1 181 1 181 181 329 98.0 3e-89 MGLSRQKVNLFSKSYEDVKKLYLTAFPAVERLPYFPLVLNAYRRLANFYAYYDKDDFVGL VYLLENEEVIYLFFLAVNPNIRSRGYGSAILQDIRNLAGKRPIILAMEPLDKTAENYHQR VKRVAFYERNGFNITDYYYHEGTEVYQVMATDASLNIQVVEKLTKKAVLGLIAISFEKKA E >gi|304426198|gb|AEEM01000015.1| GENE 218 208388 - 209602 1492 404 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 7 403 40 430 430 548 70.0 1e-155 MFDRIIYKKTTLACLSFLVISLLGSGVYSLAFEKSSANTTQTTEKQAQNKSNTTKTARVM ANGDILIHNGLYGSAEQADGSYDFTPFFEYVKDWISSADLAIGDYEGTISPDYPLGGYPL FNAPSEIADAMKDTGYDVVDLAHNHILDSGLSGAINTVETFENLGLSTIGVYKENRDTED ILIKNVNGIKIAILGYSYGYNGMEANVADEDYEKHMSDLDEDKMKSEIQEAEKKADVTIV MPQMGTEYALEPTDEQVTLYHKMIDWGADVVFGGHPHVAEPSETLEKDGDKKFIIYSMGN FISNQRLETVDNIWTERGLLMDVTFEKKNNKTTIKTVAAHPTMVWVWSKGVTGSEGFVLS DYRTLVLEDFIEGGKYRDILDSTMQEKVDTAYQEMNELVNLQWD >gi|304426198|gb|AEEM01000015.1| GENE 219 209708 - 210922 1621 404 aa, chain - ## HITS:1 COG:SP0881 KEGG:ns NR:ns ## COG: SP0881 COG0301 # Protein_GI_number: 15900764 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 404 1 404 404 692 85.0 0 MQYSEIMVRYGELSTKGKNRMRFINKLKRNMKHVLSIYPDVRVVADRDRAHIYLNGTDYV PVAESLKQIFGIQGFSPSYKVEKNLETIKKAVQDVMKDVYHEGLTFKITSKRSDHNFEMD SRELNQYLGSAVFEVLPDIQAQMKGPDVNLKVEIREEAAYLSYENIKGAGGLPVGTAGRG MLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAQDLTRKLTKFGGNIDFI EVPFTEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERNGLVIINGESLGQVASQTLES MRAINAVTATPIIRPVVTMDKLEIIDIAQKIDTFDISIQPFEDCCTIFAPDRPKTNPKIK NVEQYEKRMDVEGLVERAVAGIKVTTITPQADHDEVDDLIDDLL >gi|304426198|gb|AEEM01000015.1| GENE 220 210960 - 212252 1402 430 aa, chain - ## HITS:1 COG:SPy0816 KEGG:ns NR:ns ## COG: SPy0816 COG1104 # Protein_GI_number: 15674857 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 50 420 1 370 373 571 74.0 1e-162 MSSVRIFLLQKLLYAKFLKLTLKKLKIKTFTLIKVCAIMVVLIFVKEEKMIYFDNSATTI PYPEVLRTYQEVASKIFGNPSSLHNLGTKASRILEASRKQIADLLGVKSTEIIFTSGGTE SDNWVLKGVAFEKERYGKHIIVSDIEHPAVKESAKWLSEHGFDVSYAPVNDQGFVDVKAL AALLRPDTTLVSIMAVNNEIGSIQPIKEISELLADKPGISFHVDAVQAIGKIPAADYLTD RVDFASFSGHKFHSVRGVGFIYKKEGKKLNPLLAGGGQEGDLRSTTENVAGIAATAKALR LVTDKEAYALPKIAKMKEVIYDELAKHKDIVIFSGKDDTFAPNILTFGIKGVRGEVVVHA FEEHEIYISTTSACSSKAGKPAGTLIAMGVPTKLAQSAVRISLDDDNDMGQVEQFLTIFK QVYEKTKKVR >gi|304426198|gb|AEEM01000015.1| GENE 221 212302 - 212760 586 152 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1348 NR:ns ## KEGG: GALLO_1348 # Name: not_defined # Def: Ser and Thr rich hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 85 1 85 152 72 97.0 3e-12 MSQKYSRRQKSSSKNDKSTAPTKHIKTGFSAFQKTVALIGSILSIIVASITISNALKGSN SKTTDKSTTTTTVVIKESDSDSKTDTSASTTYSSSASANNNYNSGSNNNTYSSSSDTTYS SSSATSQSSTTPSSSDTTSDDTTTSSNTETTE >gi|304426198|gb|AEEM01000015.1| GENE 222 212899 - 214143 1241 414 aa, chain + ## HITS:1 COG:SPy0814 KEGG:ns NR:ns ## COG: SPy0814 COG0285 # Protein_GI_number: 15674855 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 414 1 413 422 456 53.0 1e-128 MNYIETLNWIHSHKANGRRPSLERMQYLLALLDNPQDKFPAIHVVGTNGKGSTTSFLQHI LTASGYKTGTFTSPFITRFNERIAIDSVEIPDQDLVKTVQAIKPIVNSAEFQDKVGKVTE FELVTALMFYYFAVVNPVDIAVIEAGIGGTYDSTNVFTAKAVICPSISIDHQETLGNSLA EIAQHKAGVLKTNVPFIFGKMAEPVRRVFYQKAEETMSSIYELGKGFSFMENGRAFDMIY HQTIIPNIQLKMFGKHQKANASLAAMTALILQKQLPAITPITIKSGLEETVWAGRCELIK PNLMLDGAHNEDSIAKLVDLLKNDFAQQQIHILFAGLNRKPLTQMLEELSAYDLTVTTFD FYQAQALSDYPEQYPKVADYKDWLSMVDDNPEDLFVVTGSLYFISEVRNHLLNH >gi|304426198|gb|AEEM01000015.1| GENE 223 214180 - 215097 1135 305 aa, chain - ## HITS:1 COG:lin1775 KEGG:ns NR:ns ## COG: lin1775 COG0039 # Protein_GI_number: 16800843 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Listeria innocua # 1 300 1 299 302 229 40.0 5e-60 MSRKVGIIGMGHVGSTVAHGLIAQGAFDDYVLIDNNEKKVTADAVDFTDAAANLNQHANI VVNDYQALADADVVISALGNIALQDNPDADRFAELPFTAKQVPLVAKKLKEVGFKGIIIA ISNPVDVVTSLYQHYSRLPKERVIGTGTLLDTARMKRAVSERFGVDARSVYGYNLGEHGN SQFTAWSQVRVKGQPISTFTDAKTLDEIAHEAMIGGHTVFYGKKYTSYGIASAAIRLALA VVSDSHEELPVSNYYEPLDTYLSYPAIVGREGIIEQIKLTLPAEEEAKLENSANFIKRKF AESLN >gi|304426198|gb|AEEM01000015.1| GENE 224 215195 - 215533 650 112 aa, chain - ## HITS:1 COG:SPy0811 KEGG:ns NR:ns ## COG: SPy0811 COG3679 # Protein_GI_number: 15674853 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 4 112 5 113 113 110 61.0 6e-25 MANIYDLANELERGIRALPEYKKAEESRAAIEADAAAKELFKEFTDFQQGLYAKLQSGQM PTGDEQAKMQELGAKIEADPVLKAYLDAQQALSVYVSDIEKIVFGPLQDLLK >gi|304426198|gb|AEEM01000015.1| GENE 225 215545 - 216651 1484 368 aa, chain - ## HITS:1 COG:SP1373 KEGG:ns NR:ns ## COG: SP1373 COG0287 # Protein_GI_number: 15901227 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 4 367 3 366 367 535 72.0 1e-152 MENKVIYIAGLGLIGGSLALGIRRDHPDYKILGYNRSDKSRNVALERGIVDEATADFKEF APLADVIILAVPIKQTIEFIKALADMDLKDNVIITDAGSTKREIVEAGEKYLAGKNVRFV GSHPMAGSHKSGAIAAEVNLFENAYYIFTPSRLTDASTIADMKVILSGLHARYIEIDAAE HDRVTSQISHFPHILAASLMEQAGDYASEHEMTNHFAAGGFRDMTRIAESEPGMWTSILL TNKTAVLERIDDFKNRLDGVAELISQNDADAIWNYFNHAKETRKEMNIHKRGGVESGFDI FVDVPDEEDVILEILELLRGTSLVNVHINEENREDINGILQISFKNIKDLEHAKKVISEN TDYKVYVN >gi|304426198|gb|AEEM01000015.1| GENE 226 216732 - 217898 1550 388 aa, chain - ## HITS:1 COG:SP1374 KEGG:ns NR:ns ## COG: SP1374 COG0082 # Protein_GI_number: 15901228 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 388 1 388 388 620 89.0 1e-177 MRYLTAGESHGPRLTAIIEGVPAGLPLTAEDINVDLKRRQGGYGRGGRMKIESDKVEITS GVRHGKTTGAPITLHVINKDHEKWLDIMAVEDIDDSLKTKRKITHPRPGHADLVGGMKYR FEDLRNSLERSSARETTMRVAVGAVAKRILAELDIEIANHVVVFGGKEIDVPEGLTVSQI KELASQSEVSIVNQEREQEIKDYIDQIKKDGDTIGGVVETVVGGVPVGLGSYVQWDKKLD AKIAGAVVSINAFKGVEFGLGFKDGYLKGSQVMDEILWNEEDGYTRRTNNLGGFEGGMTN GQPIVVRGVMKPIPTLYKPLMSVDIETHEPYKATVERSDPTALPAAGVVMEAVVATVVAD EILEKFSSDNLEELKEAVARHRDYVKHF >gi|304426198|gb|AEEM01000015.1| GENE 227 217900 - 218967 1198 355 aa, chain - ## HITS:1 COG:SP1375 KEGG:ns NR:ns ## COG: SP1375 COG0337 # Protein_GI_number: 15901229 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 355 1 355 355 560 76.0 1e-159 MKLNVNLPQTPYDIVIEKGVLSKAGDWVKKLWRPQKIAIITDNHVGSLYAEKVKLSIENA GFEVIVFDFLEGEASKNLKTVNKAYEFLVKNGMTRSDGIVALGGGVVGDLAGFVASTYMR GIHFLQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFTQPDGVLIDPKTLQSLGKRELIE GMGEVIKYGLIDDVELWEELSAMDGSPESILEHAESIIYRSCNVKRKVVVEDELDNGVRL YLNFGHTIGHAVEATAGYGKVMHGEAVAIGMVQISRVAEKKGLMPQGITKEIFDMCQKFG LPTDYKPWHVDELYGALVHDKKARGKMIKTVIVPELGSAAINQIPLEEMKEYLEK >gi|304426198|gb|AEEM01000015.1| GENE 228 218990 - 219859 1197 289 aa, chain - ## HITS:1 COG:SP1376 KEGG:ns NR:ns ## COG: SP1376 COG0169 # Protein_GI_number: 15901230 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 283 284 345 58.0 5e-95 MQIDGYTRLAAVVATPIKHSISPFIHNYAFDKTGVNGVYVAWDIPEEDLAITLENVKRYD MFGMNISMPYKQKVIPYMDELTDSAQLIGAVNTVINREGKLIGHNTDGIGFFRSLATFAD FDVKDKTMTILGGGGAATALIAQAALNGASHINIFNQTQFLEATREKAQEFADKTGVSIA VYPVEDLKTIQEKVLESQLFVNATSVGMDGKSMIITEDFEFPAGLLVADTIYQPFETPFL KLARSKGLTALNGLGMLLFQAAEAFEIWTGETMPTAEIWSALEEKYNTK >gi|304426198|gb|AEEM01000015.1| GENE 229 219849 - 220505 691 218 aa, chain - ## HITS:1 COG:SPy0809 KEGG:ns NR:ns ## COG: SPy0809 COG0710 # Protein_GI_number: 15674851 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Streptococcus pyogenes M1 GAS # 1 218 8 225 228 338 73.0 5e-93 MPKNLEEAQSIDISKFDEVDIIEWRADFLDKDDIMTVAPAIFEKFSGREIIFTIRTDKEG GNINLSDGDYVELLKNINAIYHPDYVDFEYFSHKEAFQQMLDFPNLVLSYHNFDETPENL MESFSELTALAPRVVKVAVMPQSEQDVLDLMNYTRGFKTLNPEQEYATMSMGKLGRVSRF AVDVFGSSWSFASLEQASAPGQVALADMKHIREVLDAD >gi|304426198|gb|AEEM01000015.1| GENE 230 220523 - 221686 1073 387 aa, chain - ## HITS:1 COG:SPy0808 KEGG:ns NR:ns ## COG: SPy0808 COG1092 # Protein_GI_number: 15674850 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 387 1 387 387 536 68.0 1e-152 MNKLYVDSFVEKKIKRGIQLLDGRDFHQLDFDNQLVAVYNHSHQFLGTAYLSQQNKGIGW FLGSRKIELTESYFVDLFTKAKKQRQNFENSDLTTAYRLFNQDGDNFGGVTIDRYADFVV FSWYNTFIYQYRDVIINAFQKVYPAIKGGYEKIRFKGLDYESAHIYGQEAPASFTILENG VKYSVFMNDGLMTGIFLDQHDVRDTLINELGLGKRVLNMFSYTAAFSVAAAMGGAIETTS VDLAKRSRELSQAHFEANGLDLSNHHFVVMDVFEYFKYAKRKQLTFDLIVIDPPSFARNK KQTFSVAKDYHRLISQALEVLSEDGTIIASTNAANLTVAQFKKQLEKGFASVKHDYVRLQ QLPSDFTVNKADVNSNYLKVFTIKVKK >gi|304426198|gb|AEEM01000015.1| GENE 231 221821 - 223989 2177 722 aa, chain + ## HITS:1 COG:SPy0807 KEGG:ns NR:ns ## COG: SPy0807 COG1368 # Protein_GI_number: 15674849 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 712 14 725 736 1050 74.0 0 MKKLKQVISHVLNTRLGFILTLLFMYWLKTMWAYHVDFSLDLGNLYQVFLSIINPIPLGL LLLGLSLYIKRTRVFYAVSWIIYTILNILLIANAIYFREFSDFITVSAMLASSKVSAGLG DSALNLLRVWDIVYIFDYIILIILFATKKIKTDKRPFNKRASFAITALSALLFSINLFMA EIDRPELLTRGFSNVYVVRALGLPSFTVYSANQTYQAEKERSEATADDLTEVKEYVSEHY AAPNSKYYGIAQGKNVIVIHLESFQQFLIDYKLEVDGQSYEVTPFLNSLYHSNSTISFSN FFNQVKAGKTSDAETLMETSLFGLSSGSYMVNYGGDNTAFAAPSILAQTGGYTSAVFHGN VGSFWNRNNTYKQWGYDYFFDSSYFQEQTDENSFQYGLNDKYMFADSIKYLEHLQQPFYT KFITVSNHYPYTSLAGESDEEGFPLAQTDDETINGYFATANYLDSAIEAFFNYLKESGLY DNSIIVLYGDHYGISNSRNTSLAPLLGKDSETWTEYDNAMLQRVPFMIHIPGYTDGFISD TYGGEVDALPTLLHLLGVDTSNYVQLGQDLLSEDNDQTVALRTAGYYITPTYTSYSGHLY YTATGEEITNPDESTTAATKEIRNAVAKQLSVSDEVQTGDLLRFDTDTGLETVDSSSISY SDSLKSLKSIEKKLGDESTSLYSENGNQSTVDLFKAPSYMQLHSSSSSSSSSSSSSSSSG GS Prediction of potential genes in microbial genomes Time: Sun May 29 12:43:22 2011 Seq name: gi|304426070|gb|AEEM01000016.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00026, whole genome shotgun sequence Length of sequence - 130991 bp Number of predicted genes - 123, with homology - 120 Number of transcription units - 57, operones - 31 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 46/0.000 - CDS 63 - 422 595 ## PROTEIN SUPPORTED gi|22537529|ref|NP_688380.1| 50S ribosomal protein L20 2 1 Op 2 36/0.000 - CDS 474 - 674 329 ## PROTEIN SUPPORTED gi|125718310|ref|YP_001035443.1| 50S ribosomal protein L35 3 1 Op 3 1/0.538 - CDS 712 - 1242 435 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 - Term 1259 - 1293 3.1 4 2 Op 1 . - CDS 1408 - 2088 257 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 5 2 Op 2 . - CDS 2104 - 2598 303 ## PROTEIN SUPPORTED gi|148997664|ref|ZP_01825228.1| hypothetical protein CGSSp11BS70_02114 - Prom 2620 - 2679 5.1 + Prom 2549 - 2608 5.8 6 3 Tu 1 . + CDS 2643 - 2840 179 ## COG1141 Ferredoxin + Term 2975 - 3013 -0.9 - Term 2729 - 2786 1.2 7 4 Op 1 . - CDS 2827 - 3318 290 ## GALLO_1365 hypothetical protein 8 4 Op 2 . - CDS 3372 - 4589 1693 ## COG2195 Di- and tripeptidases - Prom 4609 - 4668 8.4 - Term 4621 - 4647 0.3 9 5 Op 1 . - CDS 4702 - 5283 549 ## GALLO_1367 conserved hypothetical lipoprotein 10 5 Op 2 . - CDS 5296 - 8268 3106 ## GALLO_1368 putative autolysin - Prom 8296 - 8355 6.0 - Term 8344 - 8386 9.0 11 6 Op 1 . - CDS 8390 - 9304 902 ## COG3942 Surface antigen 12 6 Op 2 . - CDS 9448 - 9732 209 ## SmuNN2025_1178 hypothetical protein - Prom 9756 - 9815 5.9 13 7 Op 1 . - CDS 9817 - 10743 906 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 14 7 Op 2 . - CDS 10740 - 12032 382 ## GALLO_1372 hypothetical protein 15 7 Op 3 . - CDS 12016 - 13485 636 ## GALLO_1373 hypothetical protein 16 7 Op 4 1/0.538 - CDS 13505 - 15973 1346 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 17 7 Op 5 2/0.077 - CDS 15970 - 17730 1318 ## COG3754 Lipopolysaccharide biosynthesis protein 18 7 Op 6 4/0.000 - CDS 17727 - 19070 843 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 19 7 Op 7 26/0.000 - CDS 19070 - 20269 1190 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 20 7 Op 8 3/0.000 - CDS 20269 - 21075 844 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 21 7 Op 9 26/0.000 - CDS 21072 - 22007 843 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 22 7 Op 10 3/0.000 - CDS 21997 - 23151 1256 ## COG0438 Glycosyltransferase - Prom 23180 - 23239 8.5 - Term 23292 - 23330 5.0 23 7 Op 11 . - CDS 23363 - 24217 1301 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 24243 - 24302 7.0 - Term 24274 - 24307 3.1 24 8 Tu 1 . - CDS 24309 - 24437 83 ## - Prom 24460 - 24519 5.2 - Term 24512 - 24552 4.0 25 9 Op 1 2/0.077 - CDS 24568 - 24903 439 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 26 9 Op 2 31/0.000 - CDS 24925 - 26034 1561 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 27 9 Op 3 . - CDS 26043 - 27851 1586 ## COG0358 DNA primase (bacterial type) - Prom 27915 - 27974 4.4 + Prom 28084 - 28143 8.4 28 10 Tu 1 . + CDS 28170 - 28547 571 ## COG1970 Large-conductance mechanosensitive channel + Term 28563 - 28607 -0.7 - Term 28559 - 28587 1.4 29 11 Tu 1 . - CDS 28609 - 28815 336 ## PROTEIN SUPPORTED gi|195977960|ref|YP_002123204.1| 30S ribosomal protein S21 - Prom 28881 - 28940 5.8 30 12 Tu 1 . - CDS 29029 - 29406 422 ## COG0346 Lactoylglutathione lyase and related lyases - Prom 29448 - 29507 6.6 - Term 29963 - 30000 5.2 31 13 Tu 1 . - CDS 30008 - 30829 1185 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 30854 - 30913 8.7 32 14 Tu 1 . - CDS 30945 - 32057 1054 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 32082 - 32141 3.5 - Term 32100 - 32136 2.5 33 15 Op 1 9/0.000 - CDS 32143 - 32958 1052 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 34 15 Op 2 . - CDS 32970 - 33809 1232 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 33836 - 33895 8.1 - Term 33912 - 33952 4.2 35 16 Op 1 7/0.000 - CDS 33975 - 36239 2870 ## COG0058 Glucan phosphorylase 36 16 Op 2 1/0.538 - CDS 36229 - 37770 1797 ## COG1640 4-alpha-glucanotransferase - Prom 37800 - 37859 8.7 - Term 37855 - 37900 9.0 37 17 Tu 1 . - CDS 37949 - 38974 1075 ## COG1609 Transcriptional regulators - Prom 39051 - 39110 7.9 + Prom 39194 - 39253 9.6 38 18 Op 1 19/0.000 + CDS 39294 - 40550 1523 ## COG2182 Maltose-binding periplasmic proteins/domains + Term 40558 - 40599 8.1 + Prom 40570 - 40629 5.9 39 18 Op 2 20/0.000 + CDS 40680 - 42047 1350 ## COG1175 ABC-type sugar transport systems, permease components 40 18 Op 3 . + CDS 42047 - 42883 922 ## COG3833 ABC-type maltose transport systems, permease component + Term 42926 - 42965 3.0 - Term 42914 - 42951 6.4 41 19 Op 1 1/0.538 - CDS 42993 - 43457 694 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 43487 - 43546 3.7 42 19 Op 2 . - CDS 43548 - 45539 2325 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 45698 - 45757 7.5 + Prom 45646 - 45705 6.8 43 20 Op 1 16/0.000 + CDS 45728 - 47965 2886 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 44 20 Op 2 . + CDS 47965 - 48705 603 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 48717 - 48753 4.5 + Prom 48833 - 48892 5.8 45 21 Tu 1 . + CDS 49110 - 50609 806 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 50615 - 50641 0.3 - Term 50593 - 50637 10.2 46 22 Tu 1 . - CDS 50787 - 50969 302 ## GALLO_1408 hypothetical protein - Prom 51002 - 51061 5.6 47 23 Op 1 . - CDS 51381 - 52694 1955 ## COG0536 Predicted GTPase - Prom 52715 - 52774 3.1 48 23 Op 2 . - CDS 52780 - 52908 148 ## 49 23 Op 3 . - CDS 52990 - 53718 653 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 53759 - 53818 3.3 - Term 53779 - 53826 7.1 50 24 Tu 1 . - CDS 53843 - 55489 2194 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 55525 - 55584 9.1 - Term 55820 - 55877 7.1 51 25 Tu 1 . - CDS 55878 - 57527 1978 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 57563 - 57622 10.1 + Prom 57851 - 57910 10.1 52 26 Op 1 1/0.538 + CDS 57952 - 58386 526 ## COG1846 Transcriptional regulators 53 26 Op 2 . + CDS 58383 - 59036 711 ## COG2364 Predicted membrane protein + Term 59054 - 59091 4.2 54 27 Tu 1 . - CDS 59095 - 60750 1577 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 60799 - 60858 4.3 - Term 60905 - 60963 6.4 55 28 Tu 1 . - CDS 60978 - 61421 526 ## COG1396 Predicted transcriptional regulators - Prom 61447 - 61506 5.2 56 29 Op 1 . - CDS 61547 - 62395 717 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 62430 - 62489 5.7 - Term 62445 - 62484 -0.9 57 29 Op 2 . - CDS 62491 - 63033 527 ## Shel_18600 hypothetical protein - Prom 63056 - 63115 9.3 58 30 Tu 1 . - CDS 63150 - 63614 475 ## COG0590 Cytosine/adenosine deaminases - Prom 63683 - 63742 7.4 59 31 Op 1 . - CDS 63744 - 64055 356 ## Amuc_1030 cupin 2 conserved barrel domain protein 60 31 Op 2 . - CDS 64124 - 64573 373 ## Blon_2373 GCN5-related N-acetyltransferase 61 31 Op 3 8/0.000 - CDS 64606 - 65016 321 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 62 31 Op 4 . - CDS 65068 - 65535 252 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 63 31 Op 5 . - CDS 65532 - 66137 424 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases - Prom 66158 - 66217 6.2 - Term 66183 - 66217 1.1 64 32 Op 1 . - CDS 66227 - 67156 865 ## COG0679 Predicted permeases 65 32 Op 2 . - CDS 67249 - 68136 457 ## COG1266 Predicted metal-dependent membrane protease - Prom 68164 - 68223 4.1 66 33 Op 1 . - CDS 68328 - 68630 342 ## GALLO_1427 putative acetyltransferase 67 33 Op 2 . - CDS 68660 - 69178 466 ## GALLO_1428 hypothetical protein - Prom 69215 - 69274 6.5 - Term 69206 - 69243 -1.0 68 34 Tu 1 . - CDS 69474 - 69947 69 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 70004 - 70063 4.0 69 35 Tu 1 . - CDS 70246 - 71607 1448 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 71692 - 71751 5.6 - Term 71662 - 71699 3.1 70 36 Op 1 . - CDS 71798 - 71908 61 ## - Prom 71933 - 71992 1.5 71 36 Op 2 . - CDS 71999 - 72193 206 ## COG3654 Prophage maintenance system killer protein 72 36 Op 3 . - CDS 72190 - 72423 270 ## SPG_0814 hypothetical protein - Prom 72447 - 72506 8.5 - Term 72492 - 72534 8.2 73 37 Op 1 1/0.538 - CDS 72582 - 74024 1210 ## COG1316 Transcriptional regulator - Prom 74048 - 74107 2.2 74 37 Op 2 2/0.077 - CDS 74111 - 74935 996 ## COG0077 Prephenate dehydratase 75 37 Op 3 5/0.000 - CDS 74932 - 75408 650 ## COG0703 Shikimate kinase 76 37 Op 4 . - CDS 75401 - 76684 1722 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Prom 76708 - 76767 5.4 - Term 76859 - 76895 4.2 77 38 Tu 1 . - CDS 76906 - 78741 2449 ## COG0481 Membrane GTPase LepA - Prom 78767 - 78826 9.1 78 39 Tu 1 . - CDS 79376 - 79774 543 ## COG0105 Nucleoside diphosphate kinase - Prom 79823 - 79882 5.8 - Term 81476 - 81514 -1.0 79 40 Op 1 . - CDS 81622 - 82002 471 ## COG1598 Uncharacterized conserved protein 80 40 Op 2 . - CDS 82014 - 82202 193 ## GALLO_1442 hypothetical protein - Prom 82237 - 82296 5.4 - Term 82248 - 82284 4.2 81 41 Op 1 . - CDS 82298 - 82960 663 ## GALLO_1443 CRISPR-associated protein 82 41 Op 2 4/0.000 - CDS 82950 - 83279 380 ## COG3512 Uncharacterized protein conserved in bacteria 83 41 Op 3 5/0.000 - CDS 83291 - 84157 597 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 84 41 Op 4 . - CDS 84157 - 88269 3948 ## COG3513 Uncharacterized protein conserved in bacteria - Prom 88452 - 88511 11.8 - Term 88774 - 88806 -0.9 85 42 Op 1 . - CDS 88827 - 88997 220 ## GALLO_1447 hypothetical protein 86 42 Op 2 3/0.000 - CDS 88999 - 89679 504 ## COG4478 Predicted membrane protein 87 42 Op 3 . - CDS 89669 - 90442 1234 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Term 90459 - 90493 1.5 88 43 Op 1 . - CDS 90503 - 91126 655 ## COG1051 ADP-ribose pyrophosphatase 89 43 Op 2 2/0.077 - CDS 91126 - 91854 619 ## COG3884 Acyl-ACP thioesterase 90 43 Op 3 1/0.538 - CDS 91859 - 93070 757 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 91 43 Op 4 6/0.000 - CDS 93095 - 94447 1858 ## COG1109 Phosphomannomutase - Prom 94513 - 94572 10.7 92 44 Op 1 7/0.000 - CDS 94589 - 95545 1275 ## COG4856 Uncharacterized protein conserved in bacteria 93 44 Op 2 . - CDS 95542 - 96390 1026 ## COG1624 Uncharacterized conserved protein - Prom 96425 - 96484 6.3 + Prom 96384 - 96443 7.5 94 45 Op 1 10/0.000 + CDS 96496 - 97839 1461 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 95 45 Op 2 . + CDS 97841 - 98629 1088 ## COG3442 Predicted glutamine amidotransferase + Term 98632 - 98678 2.1 - Term 98801 - 98838 5.1 96 46 Tu 1 . - CDS 98862 - 100160 1815 ## COG0148 Enolase - Prom 100196 - 100255 10.6 + Prom 100235 - 100294 4.4 97 47 Tu 1 . + CDS 100370 - 100819 465 ## COG5506 Uncharacterized conserved protein - Term 100760 - 100792 4.0 98 48 Tu 1 . - CDS 100816 - 101931 1163 ## COG1929 Glycerate kinase - Prom 101964 - 102023 5.8 + Prom 101928 - 101987 7.1 99 49 Tu 1 . + CDS 102009 - 102503 394 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 102492 - 102529 3.8 100 50 Tu 1 . - CDS 102551 - 109243 7045 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 109281 - 109340 6.3 - Term 109399 - 109444 6.3 101 51 Op 1 4/0.000 - CDS 109475 - 109789 430 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 102 51 Op 2 24/0.000 - CDS 109809 - 110129 143 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 103 51 Op 3 23/0.000 - CDS 110126 - 110884 832 ## COG0107 Imidazoleglycerol-phosphate synthase 104 51 Op 4 25/0.000 - CDS 110888 - 111607 1028 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 105 51 Op 5 18/0.000 - CDS 111659 - 112267 657 ## COG0118 Glutamine amidotransferase 106 51 Op 6 . - CDS 112338 - 112922 658 ## COG0131 Imidazoleglycerol-phosphate dehydratase 107 51 Op 7 . - CDS 112957 - 113601 815 ## COG0560 Phosphoserine phosphatase 108 51 Op 8 18/0.000 - CDS 113594 - 114871 1761 ## COG0141 Histidinol dehydrogenase 109 51 Op 9 11/0.000 - CDS 114868 - 115515 759 ## COG0040 ATP phosphoribosyltransferase 110 51 Op 10 1/0.538 - CDS 115515 - 116483 1079 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis 111 51 Op 11 . - CDS 116510 - 117568 866 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase - Term 117922 - 117951 -0.2 112 52 Op 1 . - CDS 118060 - 118737 637 ## COG0775 Nucleoside phosphorylase - Term 118755 - 118788 1.4 113 52 Op 2 2/0.077 - CDS 118818 - 120542 1953 ## COG4477 Negative regulator of septation ring formation - Prom 120563 - 120622 5.8 114 53 Op 1 3/0.000 - CDS 120648 - 122600 2397 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 115 53 Op 2 . - CDS 122601 - 123161 399 ## COG0546 Predicted phosphatases - Prom 123190 - 123249 6.0 - Term 123228 - 123257 0.5 116 54 Tu 1 . - CDS 123263 - 124474 1072 ## COG0772 Bacterial cell division membrane protein - Prom 124497 - 124556 7.5 - TRNA 124716 - 124787 60.1 # Arg CCT 0 0 - Term 124636 - 124689 -0.9 117 55 Tu 1 . - CDS 124845 - 125192 556 ## PROTEIN SUPPORTED gi|195977886|ref|YP_002123130.1| 50S ribosomal protein L19 - Prom 125271 - 125330 7.3 - Term 125350 - 125391 6.0 118 56 Op 1 1/0.538 - CDS 125403 - 126623 1164 ## COG0038 Chloride channel protein EriC 119 56 Op 2 . - CDS 126637 - 126915 489 ## COG1605 Chorismate mutase 120 56 Op 3 . - CDS 126956 - 127648 554 ## GALLO_1482 hypothetical protein - Prom 127684 - 127743 2.3 121 56 Op 4 . - CDS 127746 - 129131 1614 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component - Prom 129272 - 129331 10.3 - Term 129290 - 129345 4.0 122 57 Op 1 . - CDS 129397 - 129840 724 ## COG0716 Flavodoxins 123 57 Op 2 . - CDS 129882 - 130901 1202 ## COG1816 Adenosine deaminase - Prom 130926 - 130985 6.2 Predicted protein(s) >gi|304426070|gb|AEEM01000016.1| GENE 1 63 - 422 595 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22537529|ref|NP_688380.1| 50S ribosomal protein L20 [Streptococcus agalactiae 2603V/R] # 1 119 1 119 119 233 100 3e-60 MARVKGGVVSRKRRKRVLKLAKGYYGAKHILFRTAKEQVMNSYYYAYRDRRQKKRDFRKL WITRINAAARMNGLSYSQLMHGLKLAEIEVNRKMLADLAVNDAAAFTALADAAKAKLGK >gi|304426070|gb|AEEM01000016.1| GENE 2 474 - 674 329 66 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|125718310|ref|YP_001035443.1| 50S ribosomal protein L35 [Streptococcus sanguinis SK36] # 1 66 1 66 66 131 93 2e-29 MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKAAMVHSGDFKRIKA MLSGLK >gi|304426070|gb|AEEM01000016.1| GENE 3 712 - 1242 435 176 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 11 171 1 163 166 172 54 1e-41 MKIIAKKDLFINDEIRVREVRLVGLDGEQLGIKPLSEAQAIADDANVDLVLIQPQATPPV AKIMDYGKFKFEYQKKRKEQRKKQSVVTVKEVRLSPVIDKGDFETKLRNGRKFLEKGNKV KVSIRFRGRMITHKEIGAKVLAEFAERTQDIAIIEQRAKMDGRQMFMQLAPIPDKK >gi|304426070|gb|AEEM01000016.1| GENE 4 1408 - 2088 257 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 1 221 32 285 863 103 30 4e-21 MKSIRIAIDGPASSGKSTVAKIIAKNLGYTYLDTGAMYRSATYLALQNGLTENNVQEILE ALSKHPISFGRAEDGSQTVFVGDKDVTLAIRQNDVTNNVSWVAAIPEVREELVEQQRRIA KNGAIIMDGRDIGTVVLPDAELKIFLIASVEERAERRFKENQEKGIETDFETLKREIAER DYKDSHRKVSPLKAADDAITFDTTGVDIDGVVKFIQEKAEKIIDMD >gi|304426070|gb|AEEM01000016.1| GENE 5 2104 - 2598 303 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148997664|ref|ZP_01825228.1| hypothetical protein CGSSp11BS70_02114 [Streptococcus pneumoniae SP11-BS70] # 1 163 1 157 158 121 40 2e-26 MAKQPWEEKVVDDNEIKISRKTKGSAISTPLLTALLSIFFVIVVAILFVVFYTSNRGSDK ASETSNFYGASSSSVVSSSSEASSSETTAETTTDESSTDASSDDTTESSSSTGSGDTITV LSGEGAASIAARAGISVETLYELNPDHMTSGYWYANPGDEVYIN >gi|304426070|gb|AEEM01000016.1| GENE 6 2643 - 2840 179 65 aa, chain + ## HITS:1 COG:SP1605 KEGG:ns NR:ns ## COG: SP1605 COG1141 # Protein_GI_number: 15901445 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Streptococcus pneumoniae TIGR4 # 1 62 1 62 68 82 66.0 2e-16 MKVSIIPEKCIACGLCQTYSKLFDYHDDGIVKFADSEDLEKVVPNSDQDTLTAIKSCPTK ALTIL >gi|304426070|gb|AEEM01000016.1| GENE 7 2827 - 3318 290 163 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1365 NR:ns ## KEGG: GALLO_1365 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 163 1 163 163 301 100.0 7e-81 MIKIFGKMRYHWQPELSWSIIYWSIAVAPMFIGLSLLFERTKIPSQFFILFAIFIVLVGL GFHRYFVIEENGRLRIVSLNPFKKSSVAIAQIKKIEVNKSGIIIKIKNQPDRIFYMRKWP KKYFLDALAVHPDFLGEVELIDNFIKLDYFEAYKANKKAPTKS >gi|304426070|gb|AEEM01000016.1| GENE 8 3372 - 4589 1693 405 aa, chain - ## HITS:1 COG:SP1008 KEGG:ns NR:ns ## COG: SP1008 COG2195 # Protein_GI_number: 15900880 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Streptococcus pneumoniae TIGR4 # 1 403 1 403 407 629 76.0 1e-180 MSYENLLNRFLSYVKVNTRSNPDSTTTPSTQTQVDFALNVLKPEMEAVGLQDVHYLTNGY LVGTLPANDSTKTRKIGFIAHMDTADFNAEGIKPQVIENYAGGAIELGQSGYVLNPEEFP NLNNYLGQTLVTTDGTTLLGSDDKSGIAEIMTAVEYLVAHPEIKHGEIRVGFGPDEEIGV GADKFDVDDFNVDFAYTVDGGPLGEIQYETFSAAALEVDFMGRNVHPGTAKNQMINALQL AIDFHNQLPENERPENTEGYEGFFHLHGMEGTVEKAHSSYIIRDFEDDSFENRKKLVQEI ADKMNAELGKESVIVNLHDQYYNMKKIIEKDMTPVELAKEVMEDLEIKPVIEPIRGGTDG SKISFMGIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVIIGIVQK >gi|304426070|gb|AEEM01000016.1| GENE 9 4702 - 5283 549 193 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1367 NR:ns ## KEGG: GALLO_1367 # Name: not_defined # Def: conserved hypothetical lipoprotein # Organism: S.gallolyticus # Pathway: not_defined # 1 193 1 193 193 204 100.0 2e-51 MKKKLRCYLTLLLSLGLLAACSTHSQNNTNQSSSSTTVSSSVKKSTNSSETSTSSTGSSE SEEASSTESSSSTEVTLAPINTGAILKADYSTMAGTWQNASGETLTFNDAGLATEGLTAD FLDIDQNGILLLDVQTGSKTNVTLYIVPANTSFSSDYLNGQSDNSEVSKDRIISSADISS GDIANKAYYHVSE >gi|304426070|gb|AEEM01000016.1| GENE 10 5296 - 8268 3106 990 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1368 NR:ns ## KEGG: GALLO_1368 # Name: not_defined # Def: putative autolysin # Organism: S.gallolyticus # Pathway: not_defined # 1 990 1 990 990 1477 99.0 0 MKKNVLRSCLLSPVIIGAFLSSSLVLADENTTISTTAENVQTEQVSSTTENTVADTSVSE AEQATESSSEQPLVEDSDNETTVSENNSSIDSATTDTTDATVVANESASSDTSDNLGANT KAEEVSEDSQTAEVAETSTTTTGAVDEEATEDDNETETLTVNTVSEVNTASLTTSLVQST AKKVTSTQTQKSLVEASVSGNTLSIQYNGTITAGESLKFAVWSDNNDQDDLVWYDADASG AAYIDLSNHKDYGIYNIHTYSFKNGQTTGLNAMTVTVARPEVTTNITQTSNGNFTITISN VPDSITSILVPVWSDNNGQDDIKWYSATQTGTGTYQATVSVANHNSDNGHYSAHIYGQSS ITGGLIGLAVTSGFDNVDTRPNATVSVVNYAEDKTTFDVVVTGSSATKTIKSVAIAVWSE DKGQDDLIWYTPTITNNSARVTIDIANHSNTSDIYNVHVYTDYADGTRVGQVLGAYQITK PTPKNDVTATLTSDGIALTLDSNTVTDYSKVKFAVWSDDEGQDDLVWYDASSAGTALASY ENHSGYGTYHIHTYSFETGKAVGLNATDIVIEKPNVQTTITKVDDNTYKVTVTNVPIYIK SVSLPVWSMVNGQDDIDWLTATKEDSSTYTGTISLKDHHYDSGDYNVHVYGQSKLGNQFI GLAVTKGFTVTETSATAPTITVSNYDKDSGVLTVTVSETSTSKQLKFIRVAAWSESDQSN LYWYTTSNITNGTASLTVDEKYHDYIKGDYTVHVYVDFSDGTTSGYNLGSYTFNADQPVQ QESSYFIDISSHNGVISVSEFLSLKSQGITGVVVKLTEGTSYTNPYASSQISNAQAAGLK VSAYHYSHYETAAEAKAEAQYFVSVAKSLGLSSSTVMVNDMESSEMLNGDINANTQAWKE EMTRLGYSDLVYYTMASWLDIKGGKVSTSTFGMSNFWVAHYVYGYTYLDQETAKSLAYYS SAAAWQYTSVSPKLSHALDENIDYTGRFTW >gi|304426070|gb|AEEM01000016.1| GENE 11 8390 - 9304 902 304 aa, chain - ## HITS:1 COG:SPy0019_2 KEGG:ns NR:ns ## COG: SPy0019_2 COG3942 # Protein_GI_number: 15674263 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 188 303 27 134 135 121 60.0 2e-27 MTTDIYAPSNGQIKYAVWSEENDQDDLRWYEDSGKGITQVDLKNHSGYGRYFVHTYLSQG GKMIGINGQDIVINKQEVSYQINKVNDTTYDVLVTNVPEYITSIAVPTWSNANGQDDIKW YTTTKVDNGTYKAQINLANHGYASGDYSVHIYGQNAITNNFEGLKGTSGFRADNVPNQNT TPTPRITTYINETNTYPVGQCTWAVKSLAPWIPNWLGNAGGWATNAKAKGFRTGSTPRVG SIAVWPNDGGGYGHVAYVTDVASNTRIQVKESNYAGNQYIANFRGWFNPLDSFWGGSVTY IYPD >gi|304426070|gb|AEEM01000016.1| GENE 12 9448 - 9732 209 94 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_1178 NR:ns ## KEGG: SmuNN2025_1178 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 82 1 81 544 77 50.0 2e-13 MSKLKTALLSTVVLGATCLSHPVFADQQGNAIVSKTNFDSASKTFEVTAQQSDNGKAIKG INVAIWSEENGQDDLKWYTNSNVSGGGKSRFNLI >gi|304426070|gb|AEEM01000016.1| GENE 13 9817 - 10743 906 308 aa, chain - ## HITS:1 COG:SPy0510 KEGG:ns NR:ns ## COG: SPy0510 COG0463 # Protein_GI_number: 15674614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 307 1 307 308 443 67.0 1e-124 MKKLSIIVPCYNEQETIYPFLEETQKVEQKLKNHLVFDYIFVNDGSKDETLNVLRDVASR FPNVHYLSFSRNFGKEAGLLAGLEAADGDLITVMDADLQDPPELLINMYQKILEGYDVVG TRRADRKGEPVIRSFFSKMFYKIINAVSDTEMVDGARDFRLMTRQVVDSILELGEVNRFS KGIFSWVGYDVTYIAYENRERVAGETSWNFWSLLKYSMEGFINFSEAPLNLSLWAGAVSF LASILGILFIIVRKLTIGGSVTGWASLVCIILFIGGIQLLALGIIGKYISKIFLETKKRP VYIVKEKG >gi|304426070|gb|AEEM01000016.1| GENE 14 10740 - 12032 382 430 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1372 NR:ns ## KEGG: GALLO_1372 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 430 1 430 430 672 100.0 0 MFTLNNNFFQKRNLKDELLINICYVLMSVLFILRTIPYFSQAGDQTWFASQAIKYNYNYL QFGIDRYFNWSSRLLIESATMFFSVHQTLFVVFIFLLLVVFWKALANIFLSDNSFAMKMS IPILFMILFTGNFYSGAGVIPNMVNYFLPMCSLVLAWNFINKDIKIYRIASFFFIIFACM QEQFAIFSFAMFLYFTVEHFMTRKKINICYFSALLISVLGLLSAIFSPGNGSRKIVETMT HYPTFNSISTLNKLYDGFMETSRVLFLDNTELNFIFLLLIVILVVSIIKKEYLTIFMISG ILYCTLFHHLGIDTPLNTIQKIVDENPNLVLFSKNYQLALYPVTLYFLFLLIIGFSIFRI FTNFKTGIFVLFIVVTGYLSRLAISFSPTIYVSGIRTFEPLIFASFIAILFMINELSMFF KLSNLERGKK >gi|304426070|gb|AEEM01000016.1| GENE 15 12016 - 13485 636 489 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1373 NR:ns ## KEGG: GALLO_1373 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 489 1 489 489 837 100.0 0 MKNKVNDFVNLNKQKIFIIFVLYCVSACSIGVVNYPYIDDIARRIEGVGNFAAHYSRYLS EFASYIVQGSHHLTDTGLTTFVVSAIILTLTSVVVLYVMFDGEQISWVSAMGSVFIGINP WFLEPISFRFDAPYICLSVLVSVIPFLFFYSKKRYYFLLSIVGIFLMCNSYQGSSGIYII MLLTLIYRDFLKGVEISELLKKLLISALAYVISMGVYLLETKLNPELALRGDTTSIAPLK AMPAAVFNNLRVYFITLKSQSTNAWLYLAIVLFIMFFVYMTYSSKINKLISSIFGIIYIA LGSILSFGVYMFFSTPLADDRPRYEYGFAYFIAIIMILLGSYSSNKVIDYVKGLVVVLLV YYSVSFEFIYASALDSQKEAFEDSAVMLAEDLNDYVTADNQTVYISSMFKDSPAYLNTLK TYPILDDLIPSNASLYWPNLLWFNTLTNLNVNLVGFDFNTINMDTLELLESNKLWDIYQL NGEIYVYTK >gi|304426070|gb|AEEM01000016.1| GENE 16 13505 - 15973 1346 822 aa, chain - ## HITS:1 COG:SPy0793 KEGG:ns NR:ns ## COG: SPy0793 COG1368 # Protein_GI_number: 15674836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 813 1 815 824 644 43.0 0 MMKKFLKSFDWVNLLRIVLLIIFLFYINFYLVNSYVLKGATSDLSLGFQSSLHFSLIAYI LSIVGISFYLVKDLSKTFFIKLVSGYFIYQIVSYFILVTRNLNNEKFKVWDLIKNHFFQP NFLVTLLIIIGISGVLYFLIQKNRYLAFIEDYLQDYDSKNTILFGFLASFVVNDRQMLKI FKELVSSYLSDNDYVHFIIHLSSNLALTLMVMGVVSYFVINAYQAIVTNSPTPSLMITVS FALATIFNYTLQLGVRSDETLLDKFIFPGATAYQIIALTCLFLIIYLVFNRFLSATFLII VTGVIISVVNNIKEGLRSEPLLITDFVWLKEISLLTSFVDKSVIIYIVLGVIATLGVYIL LRKRILPGKIFNIKRLRFSFLGALIGLGVFNFIVFRNETDSKIIDNIPVVSKVNNWVDIN WMGFSTNASYKSLTYVWTKQLTKSVMETPDGYSEEKIKELAEKYRNEASIINASRANKIE DQTVIFILSESFSDPSRVPGVTLSENVIPNITQIKDEYTSGLMISDFYGGGTANMEIQAL TGLSYSNLSPSVSVMNTEVLPKMSYIPSISDSYTDDEKIAVHLHNGANYSRNIVYKDLGF DTFIALDGTDDKPTQLEYLSAGARDSSTYYAVTSNLSSDTSQFFSVITMQNHIPWEAEEP AEITAYGEGLSDEENESLTSYARLLNITDSATADFLNELSGYDKKITVVFYGDHLPGLYP TSIFSSDPLNQYETDYFIWSNYETEKLSYPSVNSSDFPALVLKQTDSKVSPYYALLTDIL EAENQSSDDLEALSMDLQMLQYDLTLGKSYITKVDEKFFETE >gi|304426070|gb|AEEM01000016.1| GENE 17 15970 - 17730 1318 586 aa, chain - ## HITS:1 COG:SPy0792 KEGG:ns NR:ns ## COG: SPy0792 COG3754 # Protein_GI_number: 15674835 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis protein # Organism: Streptococcus pyogenes M1 GAS # 1 585 1 581 581 647 54.0 0 MKRLLLYVHFNKYNKISEHVYYQLEHMHPLFSKVIFISNSQLDEGEVDKLRQSQLIDAFI QRENIGYDFAAWHDGMAFEGFENLKAYDSVTAMNDTCFGPLWDMAPVYDKYESDEKVDFW GMTNHRAIDAGHIYIDEHLQSYFMSFKKSIVISEVFQEFWKSVEAYTDVQKVIDNYETKY TKRFVDAGFRYASVLNTVPIADNFFHSNFTIHYPHVLLDNHIPFIKIKTFDLTQHLAPYL LKEIERVSNYPTKLILDHMSDISLPTPPYLLDRKVLKVVEKEYSNTKKVAVHLHTFYVDL LEEFLNQFENFHFDYDLFLTTDTEAKKAEIESILEKNGKIAQVFLTGNRGRDIIPMLKLK EELSSYDYIGHFHTKKSPEYPYWVGDSWRNELYQMLIQSADNILANLENNDNLGLVIADI PSFFRYTKIVDPWNENRFADGMNELWERMNLERQIDFNNLSTFIMSYGTFIWFKRDTLKP LFDLELTDDEIPSEPIPQHTILHSIERILVYLAWANNYDYAIAKNDIYITPFVDNVVFNI RPNTMPNTYVNFDNIGGIKGALKYIYRGPGSAIKYIIKRMVLKFKS >gi|304426070|gb|AEEM01000016.1| GENE 18 17727 - 19070 843 447 aa, chain - ## HITS:1 COG:L6907 KEGG:ns NR:ns ## COG: L6907 COG0463 # Protein_GI_number: 15672188 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 5 237 5 238 324 190 46.0 4e-48 MDALVSIVVTCYNHESYVKDCLESIFQQTYKNIELLVFNDGSLDDSDTVIKDTLSLSPFE NTQYFYHENKGVVLTRNIALEHVSGDYLVFVDSDDTLKKDYIRLLVETAEKEDADIVYSA LYELNSGEVVLPIKEYDLQEMFIGNFIHASSLIRTSAIGNIKFDEQLNREKLEDYDFYLN LVTSKELKVVPCYETGLNYRMSFDSRSSHQNLKSYYKTYGYIIGKYLTRFPNYVKEALDY HFERLTSLDIEHSIKEEKISIYFSENEAFSDIPDYQNQIQFQDEIEIPVVKGKNYIRIRP SNIPSFYEFFVLKSKEYQTEILPILSNGLIDENSVVFEDFYPFLDYQFTLSEGDKLVLSY KRYNINDIVAKDYIGKLLAKQKYNRLQTILSYEQKQRQFESELNQKAQEFDDLSKEYNTL LSNYRSITNSIWWKIPTKIINFFRRKK >gi|304426070|gb|AEEM01000016.1| GENE 19 19070 - 20269 1190 399 aa, chain - ## HITS:1 COG:SPy0790 KEGG:ns NR:ns ## COG: SPy0790 COG1134 # Protein_GI_number: 15674833 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 398 1 400 401 556 71.0 1e-158 MSDKKIAVKVDHVSKYFKLPTEATQSLRTNLVNYFKGIKGYREQHVLKDIDFEVEEGDFF GIVGRNGSGKSTLLKIISQIYVPEKGKVTVNGKMVSFIELGVGFNPELTGRENVYMNGAM LGFTTEEVDAMYDDIVEFAELEDFMNQKLKNYSSGMQVRLAFSVAIKAQGDVLILDEVLA VGDEAFQRKCNDYFLERKTSGKTTILVTHDMGAVKKYCNKAILIEDGYIKAQGEPDEVAN QYSYDNANTEKNDDGKTVEKLVVDNLEVNLLSSGQTTPDKPIEFSISYNVLEDLETYVAF SLTDIDRNIWIYNDNSMEYLSSGKGYKHATYSCLLNNVNNLKLKLEVSIRDKNGKMLAFA NSSNTNVILVSRNDLALDDKSGRDSATGLIQRNGTWKFK >gi|304426070|gb|AEEM01000016.1| GENE 20 20269 - 21075 844 268 aa, chain - ## HITS:1 COG:L3425 KEGG:ns NR:ns ## COG: L3425 COG1682 # Protein_GI_number: 15672184 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Lactococcus lactis # 1 268 1 269 269 268 58.0 7e-72 MKFFSKENKILLKEMVKTDFKLRYQGSLIGHLWSILKPLMLFTIMYLVFVQFLRFDDGTP HYAIGLLIGMVTWNFFSEATNMGMMSIVSRGDLLRKLNFSKEIIVISSVVGAAINYGINL IVVFVFALVNGVTVSFGWLTIFPLFIELFLFSAGIAFVLATLFVKYRDIGPIWEVVMQAG MYATPIIYSLTFILQRGQVTVAKLMMLNPLAQIIQDMRHFIVFSGSMRGWDLIGHKFIAI IPYILPLFVFGIGYYIFHKNAKKFAEIL >gi|304426070|gb|AEEM01000016.1| GENE 21 21072 - 22007 843 311 aa, chain - ## HITS:1 COG:SPy0787 KEGG:ns NR:ns ## COG: SPy0787 COG0463 # Protein_GI_number: 15674831 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 309 1 309 310 426 69.0 1e-119 MKINILMSTYNGEQFLAEQIESIQKQTVKDWTLYIRDDGSSDRTPEIIQQYAQKDSRIIF INADNRENFGVIKNFYTLLKHSKADYYFFSDQDDIWLEDKLAVTLAEAEKYSNDKPLLVY TDLKIVDRELNILHESMIKTQSDHANTKLVQELTENTVTGGTAMINHALAELWTTTDNLL MHDWYLALIASALGHLVYLDYPTELYRQHDANVLGARTWSKRMKNWLKPHKLVEKYWWLI DASQTQARFLLDLNLSPENRELVENFTTIMDKSLSQRIHTLNKYGLRKNRNFHTLVFKTL IITKFGYRRNK >gi|304426070|gb|AEEM01000016.1| GENE 22 21997 - 23151 1256 384 aa, chain - ## HITS:1 COG:SPy0786 KEGG:ns NR:ns ## COG: SPy0786 COG0438 # Protein_GI_number: 15674830 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 384 1 384 384 538 65.0 1e-153 MQHVFIIGSRGLPAKYGGFETFVEELVKNKQSADIVYHVACLSDDKHQTHFSYEGADCFT IKAPKIGPARVIAYDMMAINYGLQMVKKERIKHPIFYILGNTIGAFIVPFAKKIHAVGGK VFVNPDGLEWKRSKWSKPVQAYLKYAEKSMAKTADLVISDNVGIETYIQESYPEAKTRFI AYGTDLTRSSLTADDYKVRKCFENWQTKENGYYLIVGRFVPENNYETAIREFMKSNTKRD LIIICNHKNNPYFDKLKRLTNFERDKRVKFVGTVYDRDLLNYIRENAFAYIHGHEVGGTN PGLLEALGHTKLNLVLDVDFNKSVADASAFYWNKTSGNLSCLINDADGHYDFTEYGNRAR AIVKQNYTWEKIVGEYEELFFNEN >gi|304426070|gb|AEEM01000016.1| GENE 23 23363 - 24217 1301 284 aa, chain - ## HITS:1 COG:SPy0784 KEGG:ns NR:ns ## COG: SPy0784 COG1091 # Protein_GI_number: 15674829 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Streptococcus pyogenes M1 GAS # 1 284 1 284 284 461 82.0 1e-130 MILVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAY TAVDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDGKKPVGQEWEVDDT PDPQTEYGRTKRLGEEAVEKYTDKFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVND QHGRPTWTRTLAEFMTYLTENQKEFGYYHLSNDAAEDTTWYDFAVEILKDTDVVVKPVDS SQFPAKAKRPLNSTMSLAKAKATGFVIPTWQEALQEFYKQDVKK >gi|304426070|gb|AEEM01000016.1| GENE 24 24309 - 24437 83 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVYWYRIENMPSNTNFNNVVKMSEQTAISRGKHHSEKEKYN >gi|304426070|gb|AEEM01000016.1| GENE 25 24568 - 24903 439 111 aa, chain - ## HITS:1 COG:SPy0783 KEGG:ns NR:ns ## COG: SPy0783 COG2151 # Protein_GI_number: 15674828 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Streptococcus pyogenes M1 GAS # 5 111 6 112 112 177 82.0 6e-45 MSEQKYTEEEVAKIKDRILEALEMVIDPELGIDIVNLGLVYEIRFEQNGHTEIDMTLTTM GCPLADLLTDQIHDVMREIPEVTNTEVKLVWYPAWTVDKMSRYARIALGIR >gi|304426070|gb|AEEM01000016.1| GENE 26 24925 - 26034 1561 369 aa, chain - ## HITS:1 COG:SPy0782 KEGG:ns NR:ns ## COG: SPy0782 COG0568 # Protein_GI_number: 15674827 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Streptococcus pyogenes M1 GAS # 1 369 1 369 369 639 96.0 0 MAKEKEITTFNVQVAEFIRNHKKNGTAVDDEVTEKLVIPFSLDADQIDDLLERLTDGGIS ITDKEGNPSTKYVVEEPKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTSEEEKEL AVAVAAGDLQAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS KQLRDFIED >gi|304426070|gb|AEEM01000016.1| GENE 27 26043 - 27851 1586 602 aa, chain - ## HITS:1 COG:SPy0781 KEGG:ns NR:ns ## COG: SPy0781 COG0358 # Protein_GI_number: 15674826 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Streptococcus pyogenes M1 GAS # 1 602 1 604 604 811 65.0 0 MGLVRGGDLLAIDKELISEIKNSVNIVDVIGEVVSLTRAGRNYIGLCPFHKEKTPSFNVI EDKQFFHCFGCGKSGDVYKFLEEYRQVSFLESVHLVAERAGIPLKVDVQQTQTKPQNPNQ ILIDIHKDAAKFYNAVLKTTKEGQEAKNYLAQRGLTDELIDYFNIGLSPNEPDFLYQSLA KRYDENALMASGLFNLSERTNRVYDAFQNRIMFPLTDDSGQVVAFSGRIWTKEDLENKQA KYKNTRSTALFNKSYELYHLDKARPVMSKKHEVYLMEGFMDVIAAYRAGIENAVASMGTA LTPDHVRHLKRYAKKVILTYDGDNAGQNAIAKSLELLKDFNVEIVRVPEQMDPDEFIQKN SPQALANLLENNRLSSTEFFIHYLKPENSDNLQAEIAYVEQISKIIAQSPSITAQNSYIN MVADLLPDFDYYQVEQSVNSERLQNRSNLQSEVVKQRVTVVELPISKNISAIIKAESQLM HRLLTHDYLLNEFRNRGEFTFDTQELQALYDLLVQQGEVNSYDLAQFDDRTRQMYYRVLE ENLPDEIANNEIEEIIDKRDRLLRERDLQKQSKLIRESSNLGDVDAALAALENFIAQKRN ME >gi|304426070|gb|AEEM01000016.1| GENE 28 28170 - 28547 571 125 aa, chain + ## HITS:1 COG:SPy0780 KEGG:ns NR:ns ## COG: SPy0780 COG1970 # Protein_GI_number: 15674825 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Streptococcus pyogenes M1 GAS # 1 125 1 120 120 145 68.0 1e-35 MIKELKEFLFKANVLDLAVAVVIGAAFNAIVTSLVEDVITPLFLNPALKAAGVEKIAELS WHGVAYGSFLSAVINFLIVGTTLFFIVKAANAASAFGKKQDEVEEEAAPTQEELLTEIRD LLKEK >gi|304426070|gb|AEEM01000016.1| GENE 29 28609 - 28815 336 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|195977960|ref|YP_002123204.1| 30S ribosomal protein S21 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 68 1 68 68 134 100 3e-30 MLQYLEEVKHMSKTVVRKNESLDDALRRFKRSVTKAGTLQESRKREFYEKPSVKRKRKSE AARKRKKF >gi|304426070|gb|AEEM01000016.1| GENE 30 29029 - 29406 422 125 aa, chain - ## HITS:1 COG:SA1340 KEGG:ns NR:ns ## COG: SA1340 COG0346 # Protein_GI_number: 15927090 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Staphylococcus aureus N315 # 1 123 1 123 123 86 36.0 1e-17 MKSISQIMLYVEDTEKCATFWVEKIGFTLKQTMLGPAETTAFVLVPQADSETAIVLLNKR AVAEYSPEVNLETPSLMFSCDDVKQTRENLTRLGVVVGDIVQIGNVLTCNFCDPEGHYFA FSESK >gi|304426070|gb|AEEM01000016.1| GENE 31 30008 - 30829 1185 273 aa, chain - ## HITS:1 COG:SPy0778 KEGG:ns NR:ns ## COG: SPy0778 COG0834 # Protein_GI_number: 15674823 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 1 269 1 269 270 296 64.0 3e-80 MKIKKIFLGVLALISVLTLAACGSSSNENLQEKIVKKGKLVVAISPDYAPFEFKALVNGK DTIVGADVELAQAIADELGVELELSSMSFDNVLSSLQTGKADMAISGLSYTEERAKVYNF SDAYYETENAILVKASDVDTYTSVDSLSGLKVAVQKGTIEENLAKDQLSDSNIVSLTAMG EAINELKSGQVQAVDLEKPVAEGYLSQNSDLALASFALETGEGDAKAVAMPKDSGELVKT VNKVIKKLAKEDKYKQFISDAAQLTGDAVDEDE >gi|304426070|gb|AEEM01000016.1| GENE 32 30945 - 32057 1054 370 aa, chain - ## HITS:1 COG:L91456 KEGG:ns NR:ns ## COG: L91456 COG0436 # Protein_GI_number: 15674014 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Lactococcus lactis # 1 370 1 374 376 412 53.0 1e-115 MKLPRFGVEEWLNVHEKEAIYDIAGVSIDALTLQELFNLAGVSQEEFYQELLTKKLNYGW IEGSPEFKKAVSNLYHSVAESQILQTNGATGANMLVLYGLIEPKDHVISIYPTYQQLYDI PKSLGAEVDFWQVKEENNWLPDLDELRQLIRPNTKMICINNANNPTGAVMDDEYLQELVA IAKSCGAYILADEVYRPFTTKKVSSIIDLYDKGIAVNSLSKTFSLPGIRVGWVVACDEVT DILRDYRDYTMICAGVFDDMVASLALEHKEAILARNRHIIRENLAILDQWIASEPKASYI RPAEVPTSFVKLDVNVPIEAFCLTLLQKYGVLLVPGNRFDREGYVRLGYSCQQETLKQGL QLLSACLKEF >gi|304426070|gb|AEEM01000016.1| GENE 33 32143 - 32958 1052 271 aa, chain - ## HITS:1 COG:SP0112 KEGG:ns NR:ns ## COG: SP0112 COG0834 # Protein_GI_number: 15900055 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 259 4 261 268 219 49.0 5e-57 MKKFFRGFILLIIVGSLSACSSSTGVSQSSIQDKGKIVIATESEFAPFEFKTLIDGKDTL VGADIELGNAIADALGVDADFSVMSFNNVLASVTSGKADIAIAGISVTDERKKAYDFSDA YYEAENIVIIKKSDEATYTTLESLAGKAVGTQKGSIQENIAKDQLPDSSLVSLTSNGEMI NELKNNQLQAVVLEKAIAEGYVSQNDDLMIADMTLESSDTDAYAVAFAKGTDQDLIDTVN DVIKKAKDSGDFDAWLEKAATYTQSSSSSDE >gi|304426070|gb|AEEM01000016.1| GENE 34 32970 - 33809 1232 279 aa, chain - ## HITS:1 COG:SP0112 KEGG:ns NR:ns ## COG: SP0112 COG0834 # Protein_GI_number: 15900055 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 17 268 17 266 268 230 50.0 3e-60 MKVSKLFGGLAVAAASLFLLSACGSSSSEDTSVSDIKDKGTLVVALNPEFAPFEFKTLVD GKDTIVGADVEIAKAIAEELGVDVKFSSMSFNNVLASLQSGKADIAISGISATEERKKAY DFSDPYYEAENVVLIRKTDIDKYTDTDSLDGLSVGTQKGSIQETVASEQLTGAKVVSLTQ NSEMINELKNSQIEAVVLEKPIAEGYVANNSDLTISDITLTSDDADAYAVALPKGSTKLT KKVNKVIKELKESGKIDQFIQEAYELSVSDSSDSSDSDD >gi|304426070|gb|AEEM01000016.1| GENE 35 33975 - 36239 2870 754 aa, chain - ## HITS:1 COG:SPy1291 KEGG:ns NR:ns ## COG: SPy1291 COG0058 # Protein_GI_number: 15675244 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 3 753 2 753 754 1284 87.0 0 MTTNFTNYLQSKGQTLAELSNEDIYVALLHYVKELAAEKPKNTAKRKVYYISAEFLIGKL LSNNLINLGIYKDVKAELAAAGKSIAEVEDVELEPSLGNGGLGRLASCFIDSMSTLGING EGVGLNYHCGLFKQVFVDNQQEAEANYWIEKDSWLVPTDISYDVPFKDFTLKSRLDRIDV LGYKRDTKNYLNLFDIDGLDYGLIHDGISFDKTEIKKNLTLFLYPDDSDKNGELLRIYQQ YFMVSNAAQLLIDEAIERGSNLHDLADYAYVQINDTHPSMVIPELIRLLTEKHDIDFDEA VSIVKNMVGYTNHTILAEALEKWPLDYLNEVVPHLVTIIEKLNTLIASEYSDPAVQIIDE ADRVHMAHMDIHFSTSVNGVAALHTEILKNSELKPFYDIYPEKFNNKTNGITFRRWLEFA NQDLADYIKELIGDDYLTDATKLEKLLAFADDEAVHAKLAEIKHNNKLALKRYLKENKGI ELDENSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKRGNLPERKITVIFGGKAAPAYIIA QDIIHLILCLSEVINNDPEVNQYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGT GNMKFMLNGALTLGTMDGANVEIAELAGMDNIYTFGKDSDTIIDLYATEGYVSTDYYEND SVIKEAVDFIVSDELVKHGNAERLERLYNELINKDWFMTLIDLKEYIAVKEQMLADYEDQ KVWMTKVVKNIAKAGFFSSDRTIEQYNDEIWHSN >gi|304426070|gb|AEEM01000016.1| GENE 36 36229 - 37770 1797 513 aa, chain - ## HITS:1 COG:SPy1292 KEGG:ns NR:ns ## COG: SPy1292 COG1640 # Protein_GI_number: 15675245 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 495 1 495 497 697 66.0 0 MKKRASGVLMHITSLPGKQGVGTFGQEAYDFVDFLVETDQTYWQILPLTTTSYGDSPYQS FSATAGNTHLIDLELLSEQGYLDKKDFETVNFGDDLESVDYARIFELRRPILEKAVKAFL SQKENVEALAEFEKDTSWLQDFADFMAIKEFFDNKALQEWDDKAVVRREEKALETYRAKL KDAILYHKVTQYFFYQQWAKLKAYANENGIEIIGDMPIYVSADSVEVWTMPELFKVDSDK NPLCIAGVPADEFSDDGQLWGNPIYDWKNHAKTNYAWWVYRIQEGFKLYDLLRIDHFKGF SDYWEIRGDYETANDGSWEPGPGRALFDVVKDELGDLPIIAENLGYIDAKAEQLLTDTAF PGMKILEFGFYDTEGKSIDAPHNCNKNSVAYTGTHDNEVINGWYDNLTDEQKAFVNAYTH RNDDEPIAQAMLRTLFATVSDVAIATMQDLLDKPADSRMNIPNTVGGNWQWRMLKEDLTD ERKAFLKDITALYCRKNTFKTTIKEEKETKNDN >gi|304426070|gb|AEEM01000016.1| GENE 37 37949 - 38974 1075 341 aa, chain - ## HITS:1 COG:SPy1293 KEGG:ns NR:ns ## COG: SPy1293 COG1609 # Protein_GI_number: 15675246 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 337 1 337 339 459 68.0 1e-129 MVTIKDVAAKAGVNPSTVSRVLKDNKSISQKTKDKVRKAMAELGYVPNVAAQMLASGLTY NVGLIFPPLMTPDRLNEPFFMQILSTITSEAKLNDFTVSIATGMTVDELEEQVKLMYRQK RVDGFIILYSDPDDPVRKYLMDNDVPFVIVGAPEGFENDITYIDNDNQLMGKKAVEYLYQ KGHREILFVTDDLKSEVSSERYFGYLRGMEKLELDSNPALLFDRRDPMVLEELIQKIEES KATALIVIADTISVRITQFLSYYQLSVPDDISIITFNNSAYSTLVHPYLTTFDINVSNLG RTSFRRLVELIKSPKTAITEKIIVPFTLRERESVRQLHVND >gi|304426070|gb|AEEM01000016.1| GENE 38 39294 - 40550 1523 418 aa, chain + ## HITS:1 COG:SPy1294 KEGG:ns NR:ns ## COG: SPy1294 COG2182 # Protein_GI_number: 15675247 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Streptococcus pyogenes M1 GAS # 5 418 3 415 415 536 72.0 1e-152 MKKNTWKKMVLAGAGLTLAGSVLVACSNSSSNSSSSSSSKTIKLWVPTGAKESYSEVVKQ FEEESGYTVKVVESNDSKAQENVKKDPEKAADVFSLPHDQLGQLVESGVIQEVPEEYANE IAENDTDQAVAGAQYNGKTYAFPFGIESQVLFYNKSKLSEEDVTNYETITSKATFGATFK SMNAYATAPLFMSVGDTLFGEDGETVDGTNWGNEAGVSVLQWISDQNSNSGFVNLTAENA MSKFGDGSVAAIETGPWDLSAAQEAIGEENLGIAVYPTVTIGGNTVQQKAFLGVKLFAVN QAPAGSDTDRIAASYKLASMLTSAESQENQFTYEGRNIIPANKEVQESDTVQSNELAQAV IKMASSSDYTVVTPKLSQMTTFWTESAALLSDVYNGKIQSSDYLTKLQEFDADLAAAE >gi|304426070|gb|AEEM01000016.1| GENE 39 40680 - 42047 1350 455 aa, chain + ## HITS:1 COG:SPy1295 KEGG:ns NR:ns ## COG: SPy1295 COG1175 # Protein_GI_number: 15675248 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 1 455 1 453 453 679 79.0 0 MINSQYFDSVPVKEAFKKGGFDTKLSFLIMGFSNFYHKQIIKGCLFLLSEILFLIAFVTS IIPSLQGLITLGTQEQGLVEKTVGGIKMKVAVEGDNSMLMLIFGLAALIFCLVFAYIYWC NLKSARNLYVLDKENKKIPTFKEDFETLANGRFHMTLMAIPMIGVLLFTILPLIYMICLA FTSYDHNHLPPKSLFDWVGFTNFGNIFNGRMAGTFFPVLSWTLIWAVFATVTNFFFGIIL ALIINTKGLKLKKMWRTIFVITIAVPQFISLLIMRNLLSDAGPINAILEKIGLVSAANPL PFLSDPLWAKFSIIIVNMWVGIPVTMLVATGIIMNLPQEQIEAAEIDGASKFQIFKSITF PQILLVMMPNLIQQFIGNINNFNVIYLLTGGGPTNSNFYQAGSTDLLVTWLYNLTVTAAD YNLASVIGIIIFVLSAVFSLLAYTRTSSYKEGVAK >gi|304426070|gb|AEEM01000016.1| GENE 40 42047 - 42883 922 278 aa, chain + ## HITS:1 COG:SPy1296 KEGG:ns NR:ns ## COG: SPy1296 COG3833 # Protein_GI_number: 15675249 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 278 1 278 278 407 84.0 1e-113 MKNKKRLRLTFVYILLIVLSIIWLFPIVWVVLTSFRGEGTAYVNYFIPKTWTLDNYIKLF TSDAFPFGQWFLNTLLVATASCIISTFITVAMAYSLSRIKFKHRNGFLKLALVLNMFPGF MSMIAVYYILKAFNLDQTLLALVLVYSAGAALGFYIAKGFFDTIPYSLDESAMIDGATRA DIFFKITLPLSKPIIVYTALMAFIGPWIDFIFAKVILGDATSKYTVAIGLFSMLQQDTIN DWFMSFTAGSVIIAIPITLLFMFMQKYYVEGITGGSVK >gi|304426070|gb|AEEM01000016.1| GENE 41 42993 - 43457 694 154 aa, chain - ## HITS:1 COG:SP1235 KEGG:ns NR:ns ## COG: SP1235 COG0494 # Protein_GI_number: 15901097 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pneumoniae TIGR4 # 1 154 1 155 155 166 51.0 2e-41 MSRAQSVILTNMCLIEDGQGNVVMQIRDPKRYRWSGYALPGGHIEPHEGLVESVIREVKE ETGLTINNPKLVGMKHWYTKEDERYLVFLYRASDYVGDIHSTDEGEIKWVPRKELPKLDL AYDMLNLLRVFEEDDLNELFYRERLKDDFLREFW >gi|304426070|gb|AEEM01000016.1| GENE 42 43548 - 45539 2325 663 aa, chain - ## HITS:1 COG:SP1238 KEGG:ns NR:ns ## COG: SP1238 COG0556 # Protein_GI_number: 15901100 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Streptococcus pneumoniae TIGR4 # 1 663 1 662 662 1115 87.0 0 MIDRVENNQFKLVSKYQPSGDQPEAIEALVDNIEGGEKAQILLGATGTGKTYTMSQVIAK VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEISRDQLLND LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL GEVEHLAIFPATHFMTNEEHMEHAIHNILEEMEEQVKQFEAEGKLIEAQRIRQRTEYDVE MLREMGYTNGVENYSRHMDGRSEGEPPFTLLDFFPEDFLIMVDESHMTMGQIKGMYNGDR SRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYELEQTDTVVEQIIRPT GLLDPEVEVRPTMGQMDDLLGEINSRAEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI QTIGRAARNSEGHVIMYADKITESMQKAMDETARRREIQMRYNEEHGIIPQTIKKDIRDL IAISKSSDTDIAEDVPDYNAMTKAERQETIKKLQKQMQEAAEMLDFELAAQLRDMVLELK AMD >gi|304426070|gb|AEEM01000016.1| GENE 43 45728 - 47965 2886 745 aa, chain + ## HITS:1 COG:SPy1315_1 KEGG:ns NR:ns ## COG: SPy1315_1 COG0834 # Protein_GI_number: 15675263 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 1 552 1 531 546 665 66.0 0 MKHKLKALMLAIFSVFFVFGVKAQADTISIVSDTAYAPFEFKDSDQTYKGIDVDIIKEVA EREGWDYEQTYPGFDAAVNAVQSGQADALMAGTTVTDARKKVFTFSDTYYDTSIVVYTKS GNTAISKYSQLKGKTVGVKNGTAAQTWLDEHADKYGYTVKTFDTSDLMNNSLDSGSIDAA MDDTPVVQYAISQGKSYEINIDAESIGSFAFAVKKGSSYEYLIDEFNEALAAMKEDGTYD QIMQKWLGDSYTSSSSSTSSSSDSSSSAASSTLTLTGDASAKATPVKSTYKIVMDSSFAP FEYQNDSGEYEGIDVELIKAIAEQQGFNVEISNPGFDAALNAVQAGQADAVMAGMSITDA RKEIFDFSDAYYTSNILLAVKSGSSVKSYSDLKGLTVGAKNGTSSYTWLSEHADEYGYTL KAFDEASTMYDSLNSGSIDALMDDEAVLLYAIQQGRDFETPIAGEKSGEYGFAVSKGSNP ELIEMFNNGLAALVESGEYDEIVNKYLGTSDSSSSSSSSSSVDETTIWGLLKNNYSQLLS GLGKTLSLTLISFAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWG IPNLLESITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSLGISYS KTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYA ILAVIYLVIITLLTRLAKRLEKRLK >gi|304426070|gb|AEEM01000016.1| GENE 44 47965 - 48705 603 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 243 2 242 245 236 48 3e-61 MAELKIDVQDLHKSYGDNEVLKGITTQFHEGDVVCIIGPSGSGKSTFLRTLNLLETITSG KVIVDGHELSDPKTDVDKVREDIGMVFQHFNLFPHMTVLENITFAPIELGKESKEEAEKH AMELLEQVGLADKRDAKPESLSGGQKQRVAIARSLAMNPDIMLFDEPTSALDPEMVGDVL NVMKNLAEQGMTMLIVTHEMGFARKVANRVIFTDGGEFLEDGTPEQIFDNPQHPRLKDFL DKVLNV >gi|304426070|gb|AEEM01000016.1| GENE 45 49110 - 50609 806 499 aa, chain + ## HITS:1 COG:SP1282 KEGG:ns NR:ns ## COG: SP1282 COG0488 # Protein_GI_number: 15901142 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 497 12 512 519 340 41.0 4e-93 MLQINHLTITHLKDLTQLISDLNVIVNSGDKLAIIGEEGTGKSTLLKAILSPQLMANYCI LEGKIDNHFPKIGYLPQALSQKQEKMTVSEFLYDNLDYVSFDFNAFYQMAARLDLDIQSL ENRNQSLKSLSGGEKLKLQLAKLVGETNDLLLLDEPSSDLDAQAINTLQAFIQSSDKTII FISHDEALLEKTATAILHLELIKRRQVARASYFSGSYTDYMTYRHKAYTKQLGQAKNDRS IKAKRDAKIQRLHQAAEYNVRNTHDSTMGRLAAKKMKNVLSLEKRYAKEEEKMVDFPEEM DSIKLFFDDIVPLDKKKKLLSWGNHDLSTGQKVSLTILGQDKLVITGRNGIGKTRLLTQI YQELNKNHFSIGYMPQDYDSVFSKEMTALTFLTQVSDSEKARTLLASLQFTRQEIEHSVL ELSGGQKAKLFLARMVLAQNHILILDEPTRHFSPTSQPLIRELLRNFNGCIISVSHDRKF IDDIANLRYQLTDKELQKY >gi|304426070|gb|AEEM01000016.1| GENE 46 50787 - 50969 302 60 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1408 NR:ns ## KEGG: GALLO_1408 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 60 1 60 60 87 95.0 1e-16 MGDKPISFRDKDGNFVSAADVWNAEKLEELFNTLNPNRRLRLEREKIAKEKADEAKDQES >gi|304426070|gb|AEEM01000016.1| GENE 47 51381 - 52694 1955 437 aa, chain - ## HITS:1 COG:SPy1333 KEGG:ns NR:ns ## COG: SPy1333 COG0536 # Protein_GI_number: 15675273 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 437 1 437 437 732 90.0 0 MSMFLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDF RYNRIFKAKSGEKGMTKGMHGRGAEDLIVRVPQGTTVRDAETNKVITDLVENGQEFVVAR GGRGGRGNIRFATPRNPAPEIAENGEPGEERDLQLELKILADVGLVGFPSVGKSTLLSVV TAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTR VILHVIDMSASEGRDPYEDYVSINNELETYNLRLMERPQIIVANKMDMPEAEENLKIFKE KLAANYDDFEEMPMIFPISSLAHQGLENLMEATAELLAKTDEFLLYTDDDMIDEEVYYGF DPDERPFEISRDDDAAWVLSGEKLEKLFVMTNMERDESVMKFARQLRGMGVDEALRERGA KDGDIVRIGNFEFEFVD >gi|304426070|gb|AEEM01000016.1| GENE 48 52780 - 52908 148 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFGENGPRKKTAFEKLTLVVVILMVLVTVGGLIATAIGSII >gi|304426070|gb|AEEM01000016.1| GENE 49 52990 - 53718 653 242 aa, chain - ## HITS:1 COG:SP0280 KEGG:ns NR:ns ## COG: SP0280 COG1187 # Protein_GI_number: 15900214 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pneumoniae TIGR4 # 1 235 1 235 240 295 66.0 6e-80 MRLDKFLVEAGIGSRTEVKQLLKKKQVLVNGKVEISPKTQIDEKADRISCQGQTLSYEKY VYYMLNKPKGVISATEDNHHKTVLDLLDKTAWDKEVFPVGRLDIDTHGLLLLTNNGKLAH AMLSPKKHVDKTYRAKVAGLMTTADVAAFANGIDLKDFTCQPAQLVILETNEAERTSVVE ITIKEGKFHQVKRMVQACGKKVTDLQRLSMVPLQLDKQLALGEWRRLTDDELASLEEFDV EL >gi|304426070|gb|AEEM01000016.1| GENE 50 53843 - 55489 2194 548 aa, chain - ## HITS:1 COG:L145267 KEGG:ns NR:ns ## COG: L145267 COG4166 # Protein_GI_number: 15672326 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Lactococcus lactis # 3 546 1 543 545 414 48.0 1e-115 MEIKNWKRVGLGAVTLLSAAVLAACGNSSSSSSSSSDEINWFIPTEISTLDISKVTDTYS SIAIGNSGSNLLRRDEDGELQPDLAEKVEVSDDGLTYTATLRDDLKWSDGSDLTAEDFVY SWQRIVDPATASEYAYLVSDAHVLNAEEVIAGTKSVDELGVKADGNKLIFTLSDPSPQFM SLLSFANFMPQSKDFVEEAGDDYGTTSEKSLYSGPYTVEDWNGTSGTFTLVKNKYYWDAK DVKTKKVNVQTIKKPDTAVQMYKDGDLDYANISNTEATYKANKNRDDVVDVPEATTAYMV YNQTGTVTALNNTKIRQALNLATDREGIVKAAIDTGSTAATALAPTGLETLPDGTDLAEY VSPGYSHDEEEAAKLFKEGLAELGADSVTLTITADSDAPVAKAAVDYIKETWENTLSGLT VEEKFVTFKQRLEDTKNQNFDVALVLWGGDYPEGSTFYGLFTTNSSYNYGKFSNADYDAA YQKAITTDALDPAAAADDYKAAEKALYDNALYNPIYFRSGKGLQNPDLKGLVRSSTGLSV DFTYAYKE >gi|304426070|gb|AEEM01000016.1| GENE 51 55878 - 57527 1978 549 aa, chain - ## HITS:1 COG:L145267 KEGG:ns NR:ns ## COG: L145267 COG4166 # Protein_GI_number: 15672326 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Lactococcus lactis # 6 547 3 543 545 394 47.0 1e-109 MEFKSTWKRVGLGVVSLASAALLAACGNSSSSSSSSNEINWYTPTEILTLDISKNTDQYS ALAIGNSSSNLLRVDENGDPQPDLAKSVEISDDGLTYTATLRDDLKWSDGSDLTADDFVY TWQRIVDPATASEYAYLAVESHLENADKINSGEITDLSQLGVKADGNTITFTLTSPCPQF KYYLAFANFMPQKKSFVEEEGSDYGTTSDDQIYSGPYTVEDWNGSDGSFKLVKNKYYWDA DNVKTETVNVQAIKKADTAVQMYKNGELDTANISATSSIYAANKSNEDAVAVQEARLTYM VYNETGSVPSLANTKIRQALNLATDRQGVVEAAIDTGSKPATSLVTPSLAKLTDGTDLSE YVSPGYSYDEDEAATLFKEGLAELGTDSITLTITADSDDAVTKAAVDYIKQSWEDALPGL KIEEKFVTFKQRLEDTKNQNFEVALVSWGGDYPEGSTFYGLFSSTSAYNYGKVSSSEFDE AYNKAITTDALDTDAAADDYKAAEKALYDGAHYNPIYFRSTEWLQNPSIKGLVRNSTGLT VDFTYAYKD >gi|304426070|gb|AEEM01000016.1| GENE 52 57952 - 58386 526 144 aa, chain + ## HITS:1 COG:CAC0197 KEGG:ns NR:ns ## COG: CAC0197 COG1846 # Protein_GI_number: 15893490 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 2 139 4 137 140 103 41.0 9e-23 MTLHYQLMRTHTALGRRIFARAQKELGLSSGQPKVLDALLENEGSDQKTLAKLCEIEQAT LGNIIMRMEENGLVERRQKAGNRRSFYVYLTEHGKTVAEQMKVIFDEEDTNALQLLSKDE QQLAEELLDKIWQGINNISGGDKA >gi|304426070|gb|AEEM01000016.1| GENE 53 58383 - 59036 711 217 aa, chain + ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 2 206 3 206 227 119 38.0 5e-27 MRDHLSKRLIMYFLGLFTMTIGVALSVKSNLGMSPVSSIPYTMTCIWGIEMGKATIIFHC FLVLLQMILLRRNFKPVNLLQVLVGIVFGYFTTFCNWGVSFLPTPENLVIRLLMMLISTV IIAFGIFMYLPPNIMPLAGEGAMKAVSDVTGIAFPKVKVGFDITMVVISLISCLIFIKGL GSVGIGTIIAAFLVGSILNVIENFLGNYRDKWLGIKN >gi|304426070|gb|AEEM01000016.1| GENE 54 59095 - 60750 1577 551 aa, chain - ## HITS:1 COG:VCA0077 KEGG:ns NR:ns ## COG: VCA0077 COG0659 # Protein_GI_number: 15600848 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Vibrio cholerae # 22 547 17 543 553 394 45.0 1e-109 MDAFKYIKPKLFSTLKNYTGAQFAKDLVAGIIVAIIALPLSIALAIASGVNPEQGLYTAV VAGFFISFLGGSRVQIGGPTAAFVVIIYGIIAQYGMAGLTIAIFLAGIMMIVMGLLHFGD LIKFIPKTITVGFTLGIAVGILVGQLKDFFGLSMGAVPAEFAEKMIAYAQHINTIHWPTL LIGLIALLIQIFWPRVSQKIPGSLVAIIVTTAIVGLGHISSVKTIGDLYTIKAGLPTFTM PQLSFGLIRQMISPAFTIAILASIESLLSCVVSDGMIGSHHRSNAELVGQGVGNMMSALF GGIPATGAIARTAANVKNGGRTPIAGMMHAVTLLLILLFLMPYTSLIPMSCLASILIMVA YNMSGWRTFVHMLKKAPKSDIAVLVITLVLTVFFDLVVAIEFGMVLAAFLFLKRMSDVAA VRQWVDKDSLDDNELSENTDLKHVPNNTVVYEIFGSLFFGAANDFLNFNHEEGKNVLILR MRNVPAMDISGLEALEETLEICQKRGMTLILSHVNKQPYHVMEKAGFIEKVGQENLCENI DASLKRAASLA >gi|304426070|gb|AEEM01000016.1| GENE 55 60978 - 61421 526 147 aa, chain - ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 68 1 68 107 65 42.0 3e-11 MEIQEVLKNLRDKYQLTQEELAARVLVTRQAVSRWETGETQPNTDTLKLLSKEFNISINT LLGSPRQLICQCCGMPLTEDEVISRETDGNFNEDYCKWCYVDGAFAYTTKDSLLDYLVAN MPNPDNLSDEERRLQFDAYLSQLKHWK >gi|304426070|gb|AEEM01000016.1| GENE 56 61547 - 62395 717 282 aa, chain - ## HITS:1 COG:DR0172 KEGG:ns NR:ns ## COG: DR0172 COG0491 # Protein_GI_number: 15805209 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Deinococcus radiodurans # 1 274 1 257 271 84 27.0 2e-16 MGKIKIHVFHTGEVCVAPKLPFGGDDCSVIEASGIFGKKEDRIWLPVSSYLIEHPKGTFL VDTGWSRDMSPNGVFDKKAQIKSLDSRLLYKINQGKVGLGQCIDEQLLKLGIKDSDLDAV LLTHLDCDHANGLKQVSNAKKFLVSADEVAFAQKLTNRVRYRKTWWEGVNLTAFDWNDTQ GAFSKSYDLLGDGSIELISIPGHADGLFAVKVKNDEGKFVLLFSDGGYATKSWEQMITSG IAADREKQRQSLAWIREQSLDPNCIESLANHDSDIQPHVIEF >gi|304426070|gb|AEEM01000016.1| GENE 57 62491 - 63033 527 180 aa, chain - ## HITS:1 COG:no KEGG:Shel_18600 NR:ns ## KEGG: Shel_18600 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 4 175 6 177 180 176 45.0 2e-43 MDTKENIQQTFVRQYAQKDYAMMTIKDLCAAVPIARTTFYTYYDNLDDLKTEIEDNLIMG LLNVVNEIADGDIEKMIFAEFLDATQCYIQAHWDTFDTFLIRQPNLRFIDKWKAAIKQNF KKRYPDKISLPNYDLIAEMLASATISAYSYWMQNPSKVNTEEMKKLIAQALESIVKLLEL >gi|304426070|gb|AEEM01000016.1| GENE 58 63150 - 63614 475 154 aa, chain - ## HITS:1 COG:BS_yknA KEGG:ns NR:ns ## COG: BS_yknA COG0590 # Protein_GI_number: 16078382 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Bacillus subtilis # 3 113 4 114 156 119 50.0 2e-27 MLEDYMQKAIQEAYDGIKKGDGGPFGSVIVKDGEIIASGHNMVLAHHDPTAHGEVTAIRK AGEKLGTHDLSGTTLFTTGEPCPMCLAACLWANIDKIYYGCTIADNAMIGFRDQRFDELM GGRKNLPKDYLVQLNHDDCLKLFKDYQEMTHNLY >gi|304426070|gb|AEEM01000016.1| GENE 59 63744 - 64055 356 103 aa, chain - ## HITS:1 COG:no KEGG:Amuc_1030 NR:ns ## KEGG: Amuc_1030 # Name: not_defined # Def: cupin 2 conserved barrel domain protein # Organism: A.muciniphila # Pathway: not_defined # 5 103 4 103 112 80 41.0 1e-14 MKKDFMTPPEHVNFEAKKLFDNVGEIIDGSIAYINLKGGGPIKQHTHEHNHLFIVTKGEA KVLLDKEEIIIRENEAFLVEGKIPHSVWSNQDEETVMIGISVK >gi|304426070|gb|AEEM01000016.1| GENE 60 64124 - 64573 373 149 aa, chain - ## HITS:1 COG:no KEGG:Blon_2373 NR:ns ## KEGG: Blon_2373 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 2 146 3 148 148 154 57.0 1e-36 MIRKARKEDISRIAEILVFVKRIKFRPIFQDDDFSFGELQVISVAKQYIDEGIIDNILVY DDGIVKGFIRVEGNEIVELYVDYFFQNQSIGSALIEYAKAHYPITFLWAIEKNQDAIRFY EAHGFHLTDTKKFEEGTTEYLVMLTREES >gi|304426070|gb|AEEM01000016.1| GENE 61 64606 - 65016 321 136 aa, chain - ## HITS:1 COG:CAP0110 KEGG:ns NR:ns ## COG: CAP0110 COG0454 # Protein_GI_number: 15004813 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 5 120 3 119 137 107 42.0 7e-24 MVTNIDYKSIQNFKCSDLERLFLSVEWSSGHFPEKLVLAMQNFKTVYSAWDGDKLIGMIC VMDDGVMNAYIHYLLVDPDYQGHVIGRKLVQMVKEKYKSFMRIAVIGYNKEINFYENCGF VKSEDCSPLFITSLWT >gi|304426070|gb|AEEM01000016.1| GENE 62 65068 - 65535 252 155 aa, chain - ## HITS:1 COG:CAC2491 KEGG:ns NR:ns ## COG: CAC2491 COG0454 # Protein_GI_number: 15895756 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 150 1 145 155 79 33.0 2e-15 MKFKKASLSDLEILVSTRVNVLRSANQLDLSVDMKVVEKSSRLYYQEALASDNHTAFLVY NADDNVIGAGAVSYYQVMPTYHNPSGKKAYIMNMYVAPEHRRKGIATKLLDLLIADSKKR GIDHIMLEATQMGRKLYENYGFCQMSDEMQYYNKD >gi|304426070|gb|AEEM01000016.1| GENE 63 65532 - 66137 424 201 aa, chain - ## HITS:1 COG:BH0890 KEGG:ns NR:ns ## COG: BH0890 COG1305 # Protein_GI_number: 15613453 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Bacillus halodurans # 5 193 13 202 202 195 50.0 4e-50 MNQAYLEATKYVDYDHPKIQQQARQLKKESSDEIDLIKNTFQFVRDKISHSWDVQDSRVT VSASDCLREGVGICWAKANLLAALLRANGIPSGFSYQRLILGSTPDTGYCIHALNTAYLD SLGKWLRLDARGNKKNVHAEFSLDEEKLAFYPNAEGEIDYHDNHANPDQGLMTVLEHSTD AIDMYLHHLPDSLSNDIKELK >gi|304426070|gb|AEEM01000016.1| GENE 64 66227 - 67156 865 309 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 1 308 1 301 301 105 25.0 1e-22 MIVLTQIGIFLILICVDVLAVKLRILEEASLAGVSGLVMKIALPCYIFINAVTSTTRQSL MQSLIIVPVGIALYIALVLVNICIEKVFGLKGNRQKIYRVSFVFGNIGFMGIPLVAAIYP DTAILYVSVFTIVDQLFFWTYGVTLTQPVSQAKEGFSLATLKNLVSPPLVAIVLAVIFIV VGIPVPTIAESVLNTIGSTSMPLALIYIGGVLCSANLKPVLKCGELYAGIIVKMIAIPVV AFFVMAQLGLPEDMSATIAYMAALPGIELVPMLAEANGSDGDYAVCAIMMTTIACLITLP IVSLLMAIL >gi|304426070|gb|AEEM01000016.1| GENE 65 67249 - 68136 457 295 aa, chain - ## HITS:1 COG:APE0004 KEGG:ns NR:ns ## COG: APE0004 COG1266 # Protein_GI_number: 14600382 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Aeropyrum pernix # 149 250 155 261 304 61 33.0 2e-09 MNKGYSRKEVQRYLLWTFALAWLMQIVVAIVYHMGNTLFVQLLLSIMMFTPLLGVLLTKH HLKGLGWKFQFKGNVKVFLITWFAPLLLTVLGAILYFMIFPKQFDLSGQYYAASYNGKEA LAQLQAKGISYPLLVLINTFACITYAPVINAMLAIGEEVGWRGFLYPQLKAKYGKNKGRL LGGIIWGIWHWPIIGLIGYEYGTDYPGFPIVGMLIFCIFTVTSGILCDWVYEKSKSIWFP AICHGAINAVTLLPLMVCVVNTGAMTLLGPALIGIVSGIPLFIFAMFLFFKSKQN >gi|304426070|gb|AEEM01000016.1| GENE 66 68328 - 68630 342 100 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1427 NR:ns ## KEGG: GALLO_1427 # Name: not_defined # Def: putative acetyltransferase # Organism: S.gallolyticus # Pathway: not_defined # 1 100 1 100 153 178 91.0 7e-44 MKLKEIIDDTEKQDITHFILGALPEWFGISEARENYIKESAKCPFIAAYDKKHPLGFVYL KETGRDTVELFVMGVLKEYHRQGVGKALVLKAKEIATEKG >gi|304426070|gb|AEEM01000016.1| GENE 67 68660 - 69178 466 172 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1428 NR:ns ## KEGG: GALLO_1428 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 172 1 172 172 322 97.0 5e-87 MGLLDFFKKKKRLTSSDVLDDESYIKEIRHCSQEAWHQYDVLLAARGYGWKGMVDWASYM NKADLMNISTITYSSLPGSKEIECIESFRQNENDFFKMQELKDEQSSLAVGGESKTLKVP IKIVWFNQTRTLRFFTLFLDDEKLMERYIETMIRRTFLTADAMKLAKSGRID >gi|304426070|gb|AEEM01000016.1| GENE 68 69474 - 69947 69 157 aa, chain - ## HITS:1 COG:SA2355 KEGG:ns NR:ns ## COG: SA2355 COG0454 # Protein_GI_number: 15928147 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Staphylococcus aureus N315 # 1 153 3 156 162 94 36.0 8e-20 MKIETYKGKYDDEIISLILDIQNNEAKINLSLQEQPDLIDISRFYQQDGGEFWIALSDEK VVGTIGLMLKENQCAILKKFFVHKDFRSKKVGLSLYNALLKYAKEIDIQHIILDTPSVAT ASHRFYERAGFHIISMEELPIPYTYPDRDSILYMLDF >gi|304426070|gb|AEEM01000016.1| GENE 69 70246 - 71607 1448 453 aa, chain - ## HITS:1 COG:SPy1346 KEGG:ns NR:ns ## COG: SPy1346 COG2265 # Protein_GI_number: 15675282 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 448 12 459 462 727 79.0 0 MLSKNAIVDAEITDLSHEGAGVAKVDGFVFFVENALPGEKIKMRVLKVKKNIGFGKVEEY VTISEHRNQDLNVDYLRTGIADFGHLAYAEQLKFKRKQVMDNLYKTAGISDIEVSETLGM AHPYAYRNKAQVPVRRVNGQLETGFFRKHSHDLMPISDYYIQNKEIDRLINFTRDLLRRF DLKPYDEKEQTGLIRNLVVRRGHYSGKMMLVFVTTRPKIFRIEQIIEKIVAEFPAVKSIV QNINDKNTNVIFGNEFKTLYGKDTIIDSMLGNQYEISARSFYQVNTEMAERLYQTAIDFS DLTPEDIVIDAYSGIGTIGLSFAKNVKAVYGVEVIEEAVEDAKRNAALNGITNAHYVADS AEHAMATWSKDGIKPSVILVDPPRKGLTENFIKASVAMQPEKITYISCNPASMARDIKLY QELGYKLIKVQPVDLFPNTHHVETVVLMSRVER >gi|304426070|gb|AEEM01000016.1| GENE 70 71798 - 71908 61 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSTKELVDFTVLIATNPLTDDSFKEYCEWLNERVD >gi|304426070|gb|AEEM01000016.1| GENE 71 71999 - 72193 206 64 aa, chain - ## HITS:1 COG:SP0889 KEGG:ns NR:ns ## COG: SP0889 COG3654 # Protein_GI_number: 15900772 # Func_class: R General function prediction only # Function: Prophage maintenance system killer protein # Organism: Streptococcus pneumoniae TIGR4 # 1 64 1 64 137 81 67.0 4e-16 MTKYLTEEQLISINKMVIEKYSPLENSRLVSPSALNMIVNLPEQYVFGKELYPTLMEKAT VLFV >gi|304426070|gb|AEEM01000016.1| GENE 72 72190 - 72423 270 77 aa, chain - ## HITS:1 COG:no KEGG:SPG_0814 NR:ns ## KEGG: SPG_0814 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 77 1 78 78 70 48.0 2e-11 MIVKSRKQGNSLMITIPSYLNVPEGTEYEVKASANGELIFSPVEKSKREFATNEDISAIT DDIFKDYDDVFKELVDK >gi|304426070|gb|AEEM01000016.1| GENE 73 72582 - 74024 1210 480 aa, chain - ## HITS:1 COG:SPy1350 KEGG:ns NR:ns ## COG: SPy1350 COG1316 # Protein_GI_number: 15675283 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 6 480 9 483 483 509 56.0 1e-144 MARSNLSRHEELRYEYLLSNLEYLSAREKQEFDYLYNKKQASEVSEPPRSQPSSAYNDNY YGDYYDDAYDNQVDYYDDDNWTSQGLPKYPEEKKQSKRSFRRTSEQQAEILPTYQDNYEN YNEAFYQEPEPVTPKKAKKPKKKRRKIRIKRLLKLLGFLVILVMAGMIYMFFKGVNDVSS GETNYTAAVTETFNGEDSDDGTNILILGSDQRITQGSSDARTDTIMVMNIGNSDGKIKLV SFMRDTLVNIDGVSYNAYSNDQKLNVAFNIGEQDDNQGAELMRQTLKDNFDINIKYYVMV DFETFAEAIDTLFPNGVEIDAKFGTVDGQAVSSVEVPDDLNMQADGTVPNQTIEVGTQKM DGRTLLNYARFRKDDDGDYGRTQRQQQVISAIINQIKDPSKLFTGSAAIGKIYALTSTNI SYPFLLKEGLSVITSGQEGIEQTTIPAEGDWTDDYDMYGGLGIAIDFDKYQEELKELGLR >gi|304426070|gb|AEEM01000016.1| GENE 74 74111 - 74935 996 274 aa, chain - ## HITS:1 COG:SP1369 KEGG:ns NR:ns ## COG: SP1369 COG0077 # Protein_GI_number: 15901223 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Streptococcus pneumoniae TIGR4 # 1 274 1 274 282 370 67.0 1e-102 MKVGYLGPSGSFTHNVAVKAFPEANRMPFANITEVIKSYEEGFVDYAIIPVENSIEGSVH ETLDYLFHQAEIEAIAEIIQPIKQQLLATTQTKKIEKIFSHPQAIAQGKKYIKAHYPAAK IEMTASTAYAARFIAEHPEENFAAIAPVAAAKEYGLEIIAQDIQEMDENYTRFWVLGHQK WSFDLAKLNQKVSLALTLPDNLPGALYKALSVFAWRGIDLTKIESRPLKTALGEYFFIVD VENKNDTLVSFALEELSVLGIGYKILGRYDVYKL >gi|304426070|gb|AEEM01000016.1| GENE 75 74932 - 75408 650 158 aa, chain - ## HITS:1 COG:SP1370 KEGG:ns NR:ns ## COG: SP1370 COG0703 # Protein_GI_number: 15901224 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 157 1 157 158 187 59.0 9e-48 MARIIIGFMGSGKSTISSLLDENYIDMDALITERIGMSIADFFAKEGEAKFREIESQVLA ELADSDQVISTGGGVVINPINREILAKNPETIYLKSDFETLYDRIEHDTENVRPLFVNNS KEAFKEIFDGRQEMYETAANRIIDVAGKTPEEIVEEIG >gi|304426070|gb|AEEM01000016.1| GENE 76 75401 - 76684 1722 427 aa, chain - ## HITS:1 COG:SP1371 KEGG:ns NR:ns ## COG: SP1371 COG0128 # Protein_GI_number: 15901225 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 427 1 427 427 633 77.0 0 MKLLTNVSQLKGTLRVPGDKSISHRSIMFGSLAKGTTTVHDILRGEDVLSTMQVFRDLGV DIQDDGNIVTITGVGFDGLKAPKNKLDMGNSGTSIRLISGVLAGQDFTVEMFGDDSLSKR PMDRVIIPLRQMGVEVSGQTDRDLPPLTMRGSKALKPIHYQLPVASAQVKSALIFAALQA DGESVIIEKEKTRNHTEDMIVQFGGAIDVNGKEIRIKGGQEFTGQDVVVPGDISSAAFWL VAGLIVPNAKVTLENVGINETRTGIIDVIKEMGGKMTISNVDEIAKSATITVETSELHGV EIGGEIIPRLIDELPIIALLATQANGTTIIRDAEELKVKETDRIQVVADALNAMGADITP TDDGMIIKGKTPLHGAKVNTFGDHRIGMMTAIAALLVSDGDVELERAEAINTSYPSFFND LEVLSRG >gi|304426070|gb|AEEM01000016.1| GENE 77 76906 - 78741 2449 611 aa, chain - ## HITS:1 COG:SPy1053 KEGG:ns NR:ns ## COG: SPy1053 COG0481 # Protein_GI_number: 15675045 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Streptococcus pyogenes M1 GAS # 1 610 1 610 610 1122 94.0 0 MDIQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERG ITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQ TLANVYLALDNDLEILPVINKIDLPAADPERVRQEIEDVIGLDASEAVLASAKAGIGIEE ILEQIVEYVPAPAGDVEAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQLMSNGKT FDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTVTLAENPAEAPLHGYKQM NPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVI QERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTKVASIEEPYVKAQIMVP QEFVGAVMELAQRKRGDFVTMDYIDENRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDY EISEYRKSKLVKMDILLNGDKVDALSFIVHNEFAYERGKLIVEKLKKIIPRQQFEVPIQA AIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLS VLSMDDDNSKK >gi|304426070|gb|AEEM01000016.1| GENE 78 79376 - 79774 543 132 aa, chain - ## HITS:1 COG:SP1959 KEGG:ns NR:ns ## COG: SP1959 COG0105 # Protein_GI_number: 15901782 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 130 7 137 137 174 67.0 3e-44 MIKPDGVRRGLVGEVLHRIERRGFTIEKLEMRMATPELLEKHYADLVDRPFFPLIVDFMT SGPVITGVMSGNEVITSWRTMMGATNPKEALPGTIRGDYAQAPDEGGATFNIVHGSDSPE SVEREIALWFGE >gi|304426070|gb|AEEM01000016.1| GENE 79 81622 - 82002 471 126 aa, chain - ## HITS:1 COG:SP1786 KEGG:ns NR:ns ## COG: SP1786 COG1598 # Protein_GI_number: 15901615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 125 1 149 150 68 30.0 2e-12 MLKSYPAIFHKEDDGSFWVEFPGFGGGTEGDDVEEAMKNAREMLESSLAAYLDEGLELPK VVNMSELSVEDGFITLIQADPSPYLKSTKAIRKNVTVPEWLVRLADRENVNYSEVLTQAL EKKLQL >gi|304426070|gb|AEEM01000016.1| GENE 80 82014 - 82202 193 62 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1442 NR:ns ## KEGG: GALLO_1442 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 62 1 62 62 108 100.0 6e-23 MPLTGRELAKLAVLKGWKEVRVKGSHHQFKKDGVPYILTIPIHGNKVLGVGLEKKILKDI GL >gi|304426070|gb|AEEM01000016.1| GENE 81 82298 - 82960 663 220 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1443 NR:ns ## KEGG: GALLO_1443 # Name: not_defined # Def: CRISPR-associated protein # Organism: S.gallolyticus # Pathway: not_defined # 1 220 2 221 221 354 97.0 1e-96 MKINFPILDEPIEILDATILTVEDVTVFSNLVRQFYSYSEECDLKLFDEKLRSLKVSELL LVTDIFGFDVNSQSMLKLIHADLESQLNDKSEVKSMIEQLANTITELLSYECLENELDLE YDEITILELIKALGVKIETQSDTIFEKCFEILQIYNYLSKKKLLIFVNSGAYLTKNEMKK LIEYIKLSNQKVIFLEPRRLYDFPQYVLDSDYFLIAENMN >gi|304426070|gb|AEEM01000016.1| GENE 82 82950 - 83279 380 109 aa, chain - ## HITS:1 COG:SPy1048 KEGG:ns NR:ns ## COG: SPy1048 COG3512 # Protein_GI_number: 15675043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 107 6 112 113 164 82.0 4e-41 MRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNSANKAMIDRLQAN NPKKGSITLLTVTEKQFARMIYLNGERNTSVANSDRRLVFLGEDYSDEN >gi|304426070|gb|AEEM01000016.1| GENE 83 83291 - 84157 597 288 aa, chain - ## HITS:1 COG:SPy1047 KEGG:ns NR:ns ## COG: SPy1047 COG1518 # Protein_GI_number: 15675042 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 2 288 3 289 289 492 81.0 1e-139 MGWRTVIVNEHSKLSYKNNHLIFKDAYHTEMIHLEEIDILLLETTNIVLTTMLIERLVER NILIIFCDEKRLPTAMLTPYYGRHDSSLQLTNQIAWDDDVKCDVWTTIIAQKILNQSMYL GECSFFEKSQSIMELYHGLEPFDPSNREGHSARIYFNTLFGNDFSREQDNDINAGLDYGY TLLLSMFARELVVCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIVYENRNASFVKI KRELFTMFDETYSYNNKEMFLNNIVSDYTKKVVKALNHGGKGVPEFRI >gi|304426070|gb|AEEM01000016.1| GENE 84 84157 - 88269 3948 1370 aa, chain - ## HITS:1 COG:SPy1046 KEGG:ns NR:ns ## COG: SPy1046 COG3513 # Protein_GI_number: 15675041 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 4 1368 3 1366 1368 1596 64.0 0 MTKKNYSIGLDIGTNSVGWAVITDDYKVPAKKMKVLGNTDKKYIKKNLLGALLFDSGETA EATRLKRTARRRYTRRKNRLRYLQEIFAEEMTKVDESFFYRLDESFLTTDEKDFERHPIF GNKAEEDAYHQKFPTIYHLRNYLADSSEKADLRLVYLALAHMIKYRGHFLIEGKLNAENT DVQKLFTDFVGVYDRTFDDSHLSEITVDVASTLTEKISKSRRLENLIKYYPTEKKNTLFG NLIALALGLQPNFKMNFKLSEDAKLQFSKDTYEEDLEELLGKIGDDYADLFTSAKNLYDA ILLSGILTVDDNSTKAPLSASMIKRYVEHHEDLEKLKEFIKANKSELYHDIFKDKNKNGY AGYIENGVKQDEFYKYLKNTLSKIDGSDYFLDKIEREDFLRKQRTFDNGSIPHQIHLQEM HAILRRQGDYYPFLKEKQDRIEKILTFRIPYYVGPLVRKDSRFAWAEYRSDEKITPWNFD KVIDKEKSAEKFITRMTLNDLYLPEEKVLPKHSHVYETYAVYNELTKIKYVNEQGKESFF DSNMKQEIFDHVFKENRKVTKEKLLNYLNKEFPEYRIKDLIGLDKENKSFNASLGTYHDL KKILDKAFLDDKVNEEVIEDIIKTLTLFEDKDMIHERLQKYSDIFTANQLKKLERRHYTG WGRLSYKLINGIRNKENNKTILDYLIDDGSANRNFMQLINDDTLPFKQIIQKSQVVGDVD DIEAVVHDLPGSPAIKKGILQSVKIVDELVKVMGDNPDNIVIEMARENQTTNRGRSQSQQ RLKKLQSSLKELGSNILNEEKPSYIEDKVENSHLQNDQLFLYYIQNGKDMYTGDELDIDH LSDYDIDHIIPQAFIKDDSIDNRVLTSSAKNRGKSDDVPSLDIVRARKAEWVRLYKSGLI SKRKFDNLTKAERGGLTEADKAGFIKRQLVETRQITKHVAQILDARFNTEHDENDKVIRD VKVITLKSNLVSQFRKDFEFYKVREINDYHHAHDAYLNAVVGTALLKKYPKLASEFVYGE YKKYDIRKFITNSSDKATAKYFFYSNLMNFFKTKVKYADGTVFERPIIETNADGEIAWNK QIDFEKVRKVLSYPQVNIVKKVETQTGGFSKESILPKGDSDKLIPRKTKKVYWDTKKYGG FDSPTVAYSVFVVADVEKGKAKKLKTVKELVGISIMERSFFEENPVEFLENKGYHNIRED KLIKLPKYSLFEFEGGRRRLLASASELQKGNEMVLPGYLVELLYHAHRADNFNSTEYLNY VSEHKKEFEKVLSCVEDFANLYVDVEKNLSKIRAVADSMDNFSIEEISNSFINLLTLTAL GAPADFNFLGEKIPRKRYTSTKECLTATLIHQSITGLYETRIDLSKLGEE >gi|304426070|gb|AEEM01000016.1| GENE 85 88827 - 88997 220 56 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1447 NR:ns ## KEGG: GALLO_1447 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 56 1 56 56 68 100.0 7e-11 MSLAWYYWLLFAVSWLFAILLWIKSTTIPQKWLKALFVICGLIAFALPFFWGWLVS >gi|304426070|gb|AEEM01000016.1| GENE 86 88999 - 89679 504 226 aa, chain - ## HITS:1 COG:SPy1044 KEGG:ns NR:ns ## COG: SPy1044 COG4478 # Protein_GI_number: 15675040 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 10 205 10 205 210 191 53.0 8e-49 MKNKLWTFSTWLWLLALAVLVAIYGAWLIYPLEVDWLKLTLQVTITKDDLLKNFNILMTY LTNPLSHTLSMPDFPSSTDGLKHFRDVKHLFHLAQAVFVVLLYPSWRFWKNSRAEKSLFL HQRAFTLAAVLPVLIAVAGLLIGFDQFFTLFHEVLFPGDSTWLFNPATDPIIWVLPEEFF LHCFIIFFVTYEVIMIGLVVIARRQLAKRLQDQQKHPKTIKVERND >gi|304426070|gb|AEEM01000016.1| GENE 87 89669 - 90442 1234 257 aa, chain - ## HITS:1 COG:SPy1043 KEGG:ns NR:ns ## COG: SPy1043 COG0647 # Protein_GI_number: 15675039 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 252 1 252 254 426 84.0 1e-119 MTYKGYLIDLDGTIYKGKNRIPAGERFIQRLQERNIPYVLVTNNTTRTPEKVQEMLATQF NVHTPLETIYTATMATIDYMNDMNRGKTVYVIGETGLKTAIAEAGYVEDTENPAYVVVGL DTQLTYEMLAVATLAIQKGAVFIGTNPDLNIPTERGLMPGAGSINKLLETATRVQPVFIG KPNAIIMNKALDVLGVKREEAIMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVPTLPV KPDHVLASLDEWNFDEK >gi|304426070|gb|AEEM01000016.1| GENE 88 90503 - 91126 655 207 aa, chain - ## HITS:1 COG:BH3089 KEGG:ns NR:ns ## COG: BH3089 COG1051 # Protein_GI_number: 15615651 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Bacillus halodurans # 1 194 1 194 207 169 44.0 4e-42 MTVDDKKWVDWLVRLQSLAQAGLAYGRDKYDIERFKEIREIAVAMMAELSQLPAQKVADL FANETGYQTPKIDTRAAIFQDDKILLVQEANGKWALPGGWCDVDQSVAENTLKEVKEEAG LDVELERVIAIQDREKHNQPVSAHKICKIFSLCHAKGGHFTKNLETIASGYFACDNLPEL AESKTTKEQIAMCFTAYYDENWKTLID >gi|304426070|gb|AEEM01000016.1| GENE 89 91126 - 91854 619 242 aa, chain - ## HITS:1 COG:SP1408 KEGG:ns NR:ns ## COG: SP1408 COG3884 # Protein_GI_number: 15901262 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Streptococcus pneumoniae TIGR4 # 1 241 1 241 245 258 54.0 1e-68 MGLSYQENYQVPFYESDINHNMKLPQLLSLVLQVSGKQSLSLGMSDDYIYQTYNLVWIIT EYAIEIERLPKYTENIVIETVPTAYNKLFCYRDFNVYGESGDKIMTIHSTFVLIDYDSRK VHPVIDEIVDVYDVEKIKKISRGPRYESLENPEETTYHVRFFDLDLNGHVNNSKYLEWMY DVLDVAFLEEHIPHHINLKYVKEVHYGHDIKSRVETDGLITKHEIVTQGAVHAQARIEWK EK >gi|304426070|gb|AEEM01000016.1| GENE 90 91859 - 93070 757 403 aa, chain - ## HITS:1 COG:SPy1040 KEGG:ns NR:ns ## COG: SPy1040 COG0635 # Protein_GI_number: 15675037 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Streptococcus pyogenes M1 GAS # 28 403 1 376 376 624 82.0 1e-179 MGNAFCLLLFFRNKVIGYPWQKCYNSVMLTKPTSAYVHIPFCTQICYYCDFSKVFIKNQP VDDYLQALIREFESYDIKQLRTLYIGGGTPTSITAQQLDYLLTNLTKHLDLSVLEEFTIE ANPGDLTDDKIEVLKKSAVNRVSLGVQTFNDKQLKRIGRSHNESQIYSTIDHLKTAGFDN ISIDLIYALPGQTMEDVKENVAKAIALDIPHLSLYSLILENHTVFMNKMRRGKLNLPQED LEAEMFEYIIAELEANGFEHYEISNFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVR YRNRGPIQHYLKAVSEGNARLSEEVLTKDEMMEEELFLGLRKKSGVSIAKFEEKFGVSFE ERYGQIVTELCQQGLLVPDDKVVRMTKKGLFLGDTVAERFILE >gi|304426070|gb|AEEM01000016.1| GENE 91 93095 - 94447 1858 450 aa, chain - ## HITS:1 COG:SPy1038 KEGG:ns NR:ns ## COG: SPy1038 COG1109 # Protein_GI_number: 15675035 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 450 1 450 451 771 90.0 0 MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETGRPKVFVARDTRISGELLESA LVAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGGDGFKL ADDQEDEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVSTGVSLEGMKVALDT ANGAASVSARDVFLDLDADITVIGEKPDGLNINDGVGSTHPEQLQELVKESGAAVGLAFD GDSDRLIAVDENGDIVDGDKVMYIIGKYLSERGQLAHNTIVTTVMSNLGFHKALDREGIN KAITAVGDRYVVEEMRKSGYNLGGEQSGHVIILDYNTTGDGQLTAIQLTKVMKETGKSLS ELAAEVTIYPQKLVNVRVENSMKSKAMEVPPIADIISKMEAEMNGNGRILVRPSGTEPLL RVMAEAPTDEEVSYYVDTIADVVRKEIGID >gi|304426070|gb|AEEM01000016.1| GENE 92 94589 - 95545 1275 318 aa, chain - ## HITS:1 COG:SPy1037 KEGG:ns NR:ns ## COG: SPy1037 COG4856 # Protein_GI_number: 15675034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 318 1 318 318 323 61.0 3e-88 MKKFFNSQFWLVIVSIVFSILLFLTATSSNYTRTGSQVSGATETYTHTLENVPIDIKYDT DKYFISGYSYETEVYLTSINRVKLDSEINSDTRSFKVVADLTNLGEGTQTVPLQVTDLPS GVTATASPSSISVTIGKKKTKTFEVQGEVDSSQLATGYELKKVSTNISEVEVTSSESIID QIDHVVAKLPETEVLDSNYSGRVALQAVAADGTILASAINPSKAKLEVTVKKLTKTVPVT VKTTGEMSDKISDISYKLSQSQVTISGSQDALDAVDEVVANVDIANVTKDTSVSVNLSAN NVTVDPSVVTVQLTVTKK >gi|304426070|gb|AEEM01000016.1| GENE 93 95542 - 96390 1026 282 aa, chain - ## HITS:1 COG:SPy1036 KEGG:ns NR:ns ## COG: SPy1036 COG1624 # Protein_GI_number: 15675033 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 277 1 277 283 411 75.0 1e-115 MSNFTAIDAKFWATLVENPWTIVVHILDILIVAYFIYRLIKALAGTKIMSLIQGVVFFIL LKFVAEWIGFTTITYLMNQVITYGVIAGVVIFAPEIRSGLEKFGRSTQVFLQTQQVSDEE KLVEALVKSVAYMSPRKIGALISIERTQTLQEYISTGIPLDADISSQLLINIFIPNTPLH DGAVIIRGNKIATACSYLPLSESMAISKEFGTRHRAAIGLSENSDALTIVVSEETGGISI TSKGEFLHDLTKENFEAILRTQLITEVEEEEHWYHKIWRKKQ >gi|304426070|gb|AEEM01000016.1| GENE 94 96496 - 97839 1461 447 aa, chain + ## HITS:1 COG:SPy1035 KEGG:ns NR:ns ## COG: SPy1035 COG0769 # Protein_GI_number: 15675032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 3 446 1 444 445 707 76.0 0 MKVNTLMGITAGKSAHFVLSKMGRGSTLPGKIALKFDKDILDTIAKDYEIVVVTGTNGKT LTTALTVGILRETFGEIVTNPSGANMITGITSTFLTAKKAKSGKKIAVLEIDEASLPKIT EYITPSLFVFTNIFRDQMDRYGEIYTTYQMILDGAAKAPTATILANGDSPLFNSTNVVNP VKYYGFDTEKHTPELAHYNTEGILCPQCQQILKYKLNTYANLGDYVCENCGFHRPKLDYA LTELTKITNTTSEFVIDGQDYKINVGGLYNIYNALAAVSVAEFFEVAPEKIKAGFDKSRA VFGRQETFKIGDKSCTLVLIKNPVGASQALDMIKLAPYPFTLSVLLNANYADGIDTSWIW DANFEAVLDMDIPQAFAGGVRHSEIARRLRVTGYDENNITEAESLEEIMALIESQTTEHA YILATYTAMLQFREILASRHAVGKEMN >gi|304426070|gb|AEEM01000016.1| GENE 95 97841 - 98629 1088 262 aa, chain + ## HITS:1 COG:SPy1034 KEGG:ns NR:ns ## COG: SPy1034 COG3442 # Protein_GI_number: 15675031 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 262 1 262 263 411 81.0 1e-115 MTYTSLQSPNTKDYNYELNVAHLYGNLMNTYGDNGNILMMKYVGAKLGAKMTFDIVSLGD TFDADYYDMVFFGGGQDYEQTIVAKDLPSKKEAIADFINKDKVILAICGGFQLLGQYYVQ ANGEKINGIGVMGHYTLNQENNRFIGDIKIHNDEFNETYYGFENHQGRTFLSDDEKPLGI CVYGNGNNKEDGTEGVHYKNVYGSYFHGPILSRNANLAYRLVTTALKNKYGSSITLPSYD DILSKEVAEEYADTKSKAEFEK >gi|304426070|gb|AEEM01000016.1| GENE 96 98862 - 100160 1815 432 aa, chain - ## HITS:1 COG:SP1128 KEGG:ns NR:ns ## COG: SP1128 COG0148 # Protein_GI_number: 15900994 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Streptococcus pneumoniae TIGR4 # 1 432 1 434 434 768 91.0 0 MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYN GLGTQKAVDNVNNIIAEAIIGFDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVAR AAADYLEVPLYSYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIVPAGAPTFKEALR WGAEIFHTLKKILKERGLETAVGDEGGFAPKFDGTEDAVETIIKAIETAGYKPGEDVFLG FDCASSEFYDNGIYDYTKFEGEGGAKRTASEQIDYIEELVNKYPIITIEDAMDENDWDGW KELTKRLGKRVQLVGDDFFVTNTSYLERGIKEEAANSILIKVNQIGTLTETFEAIEMAKE AGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAE YRGLKSFYNLKK >gi|304426070|gb|AEEM01000016.1| GENE 97 100370 - 100819 465 149 aa, chain + ## HITS:1 COG:SP1127 KEGG:ns NR:ns ## COG: SP1127 COG5506 # Protein_GI_number: 15900993 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 147 1 148 148 106 39.0 1e-23 MSDLESKVLHAAAGENRLNPDEQRRYFGTFAERVVLSIPLDDSRLEDTKERFEDILKHLA SDYDTLFVKISPKLAVADQCYYMKIAQNLEIQATIVDEKNAHSPYGIIVHSNQAENVDNP LLAVRFPQAHDKPKEAPKKGFWSKLFNKD >gi|304426070|gb|AEEM01000016.1| GENE 98 100816 - 101931 1163 371 aa, chain - ## HITS:1 COG:NMA1473 KEGG:ns NR:ns ## COG: NMA1473 COG1929 # Protein_GI_number: 15794374 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Neisseria meningitidis Z2491 # 1 370 1 370 371 340 52.0 3e-93 MHILIAPDSFKESLSALDAAKTIQRGFKKALPNATFDLMPIGDGGEGTLETLTDGLHLRR DSHIVTGALGQPVEAHYATNGQLAVFEMADICGLEKVPLDKRNPLTLTTKGVGEMIGHLV DLGIKEIMIGVGGSSTNDGGIGMAAGLGYRFFDESGQEVAAVGDNLGNITTISYEDYHWD LSQVELTIITDVTNPLCGPNGATYVFGGQKGLANEKFASVDKDMEQFYQSFFPVILDLAG AGAGGGMAAGLAAFTGGRIISGIDAVLDMLNFDRRVQVADVVIVGEGRMDKQSLSGKAPV GVASRTPRGKLVIAICGSLKDDLPDFPVANIQAAFPIISGVDSLENTLAQAPQNLERTAQ NIGNLLAFTKR >gi|304426070|gb|AEEM01000016.1| GENE 99 102009 - 102503 394 164 aa, chain + ## HITS:1 COG:lin0387 KEGG:ns NR:ns ## COG: lin0387 COG0494 # Protein_GI_number: 16799464 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Listeria innocua # 1 151 1 151 169 70 30.0 1e-12 MEKWDAYLANGQKTGCILTRGQSIPDDLYHLAVDCLVQHVDNDILFVQRHLEKEAFPGFF EASAGGSALYGEDSKQAVRRELLEETGLVPVELTFSKRTVYKDDNCIMDSYLALVNSPKD TITLQNSETISYQWVAKEKLKAFLETHPVVPRHRLLIETLFLDD >gi|304426070|gb|AEEM01000016.1| GENE 100 102551 - 109243 7045 2230 aa, chain - ## HITS:1 COG:SP0268 KEGG:ns NR:ns ## COG: SP0268 COG1523 # Protein_GI_number: 15900202 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 994 2016 130 1150 1280 1246 60.0 0 MKKVSRLSFLEKRQFFGIRKLKVGVASVAIATALFWSASLANSVSADQISAETATELVAN QSEIAEQAIDVAQSETDTLADTQVEADTQIEVENVESIVSEDNTQIATAETDVDQAVEEV VTIENVAEVNVQEASNDTTSLDQLATDATAENTTQTSEVTLLNATPETAENTAPAIAEDT IRVHFQEVTDDNFSQYSLWTWGAVAEPSDGNNWPAAAMAFSENQKDDFGYYIDVKQTASH GEIGYLLLKNGEKISDSDQNITPLSQDVNEVWVTSDFKTYTYKPLADDSIIRINYQRDDG DYDGWGVWVWGDVAGEVSTWPTDALDFTQEGAYGRYVDVPLSKLLDSNIGFLLVNQNDPD GVGNKTIDLSFSERDSHSQIFLHNDDTTVYTNPYYIATVTGQDFSKATPGVHQVTVSASS YRSFNYNETDLIDVVVTNPENVDITRMQVDTTAIGGGIIEISPELNRVTITATSDTTPGD YDLPVRVYDSDNGYYDTTVTVTITERVKQEGELDWDEQVIYFMLTDRFYNGDTSNDNPYN QDYAGAINQAGTYKGGDFKGVTAKLDYLKELGVTSIWVTPIVENIPQNVGTEEGMEYYAY HGYWASDFEALNPHLGTLDDFHELIDEAAERGINIIVDVVLNHSGYGTEETFAGMVRTAE EDKGDDIQGSQSGLPDFKTEEETVREQLVAWQTAWLEKSTTAKGNSIYAFRVDTVKHVDD TTWQYFKNELALKDADFHLVGESWGASYKDTKGDLGTGSMDSLLDFGFKDIAKLLVNGNL KQANEELIARNDVLTSSYTLAQFLGSHDEDGFLYSIGGDLSKLKVAATLLLTAKGQPVIY YGEELGQSGANNWPYYDNRYEFDWDDVEGNDVLEHYQKLLAFRRDNSELLACGSHSTVAV NDSQQWLLAKRENDTDAAYILYNLKDESQTLRLLLSDDAVVTDYYSGQTYQAVLGEDGAY YLDLETPAISAGGTMLLKVSTGAITSAFIAQTEEEPIAENTIRIHFKTLPTDDLSSLGLW TWEDVETPSESWPNGAINLSNLKQDSYGYYIDVKLVDGNRQKVGLLINNTNGDNLTGDKV VNLISQEMNEVWFDENYAINYYEPLEEGMIRINYYRSDGNYDNLALWLWGSVDSSVTDRL GSWPDGIDFENVGKYGVYMDIALSDFNELGFLLLDESKEGDDAKIQPDNYSFKDLANHTQ IFLKDEDKTIYTNPYFVSTVRLTSAQQTSPTEIVAIVSNLADADKDDLFENVKVTDKDGN LMTISDLVLNPEANQLTIVGDFSQLLAPYTVSYAGDDYQAKTNWQYTDSLYAYDGELGAR VSEEGARVDLTVWSPSADSVSVVLYDKDDQTKVVGKIAMVKGDKGEWSAALTQESGLGVS DYRGYYYHYEITRGDETVLALDPYAKSLAEWNSDLIGTDPSYKVAKAAIVDTSTIGNQEL TYADISGYTDREDAIIYEAHVRDFTSDTAISDELQHQFGTFAAFVEKLDYLQELGVTHIQ LLPVMSYYYVNELANAERLTDYASSNTNYNWGYDPQSYFALTGMYSEDPTDPAKRIEEFK NLIAEIHKRGMGVILDVVYNHTADLAILEDLEPNYYHFMEADGTAKTSFGGGRPGTTHYM TRRLVLDSIAYWVDEFKVDGFRFDMMGDLDAETVQMAYDTAKALNPNIIMLGEGWISYAG DANDSRQPADQTWMSQTDSVASFSDDIRNLLKSGYPSEGAAAFITGGAKDLQTLFNNIKA QPSNFTADDPGDVIQYIAAHDNLTLHDVIAKSIQKDPAVAENEAEIQRRLRLGNLIVLTS QGTAFIHSGQEYGRTKQFLDEDYKTPVSADKVPAKSDLLTNADGTPFEYPYFISDSYDST DAINHFDWAKATDSEAYPENTQSQAYTKGLIAIRRSTDAFTLKTKEEVDRNVSLITIPNE NGVGQEDLIIAYQTIASNGDIYAVFINADTVARDFVLTDDYRNLLSAEIIADGKQAGVEA IENPSGVTMTETGLTIEPLTATILRLKKASAETERTLYDEASGVSVILGAGERDDIKKIK VSHQETNDVKTPEVLKGTDYDLFDIQPTDDFGNVLAITKTARVILPIDAGKTVAQVFYLP ENGQPQSLAFEEISRTVAGQTLKFVIFDTEHFSQYGIIYAQEAAQSSSAMATQTSAENGV TPDDQAQASVVETTTTPITVDANLETLSSTDAADTLPATGEKDGTLLTFAGVLSLASIAL LELKRRKKSE >gi|304426070|gb|AEEM01000016.1| GENE 101 109475 - 109789 430 104 aa, chain - ## HITS:1 COG:lin0570 KEGG:ns NR:ns ## COG: lin0570 COG0140 # Protein_GI_number: 16799645 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Listeria innocua # 1 103 1 102 103 97 58.0 5e-21 MLETLYKEAIDRKENPKEGSYTNYLFDKGLDKILKKVGEEATEVVIAAKNADKDEIANET ADVLYHLAVMLVETGVSIEDVDAVLKARQGKKSNVHDRPEITNY >gi|304426070|gb|AEEM01000016.1| GENE 102 109809 - 110129 143 106 aa, chain - ## HITS:1 COG:L0072_1 KEGG:ns NR:ns ## COG: L0072_1 COG0139 # Protein_GI_number: 15673197 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Lactococcus lactis # 4 106 1 102 110 130 59.0 5e-31 MSEIKLDFAKQDGLVPVIVTDYQTGQVLMLAYMNEEAYHLTLETKQMHYWSRSRQEIWHK GATSGHYQYVKSIKTDCDCDTLLVAVKQEGAACHTGAYSCFFNDIL >gi|304426070|gb|AEEM01000016.1| GENE 103 110126 - 110884 832 252 aa, chain - ## HITS:1 COG:lin0572 KEGG:ns NR:ns ## COG: lin0572 COG0107 # Protein_GI_number: 16799647 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Listeria innocua # 1 251 1 250 251 313 62.0 2e-85 MLKKRIIPCLDVKDGRVVKGVNFVNLTDVGDPVDAARAYYEAGCDELVFLDITATHEKRD TTVEMVKRVADQVFIPFTVGGGIRSVEDMNKMLKAGADKVAVNSSAVANPQLIKDCAEKF GNQCVVSAIDARKEADGTWHVYVAGGRKDTGIDLIEWAKTVVSLGAGEILLTSMDKDGTK SGFDLDMLNAVADVVNVPIIASGGAGNIDHMVDVFGKTTATGALAASIFHFGEVSITDTK AAMAAAGIEVRQ >gi|304426070|gb|AEEM01000016.1| GENE 104 110888 - 111607 1028 239 aa, chain - ## HITS:1 COG:lin0573 KEGG:ns NR:ns ## COG: lin0573 COG0106 # Protein_GI_number: 16799648 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Listeria innocua # 1 234 1 232 240 251 55.0 6e-67 MQILPAIDIKEGQAVRLFKGDFNQKTVVNPDVLGQAKIFAQAGIEFIHVVDLDGALDGRA TNRDLIAKLKQESGLGVEVGGGIRTLEQIEDYLAVGIDRVIIGSMAVKNPDFVKAALDKF GSDKIVVGIDAKNGFVATEGWLETSNVDYISLAKAMEKMGVTLFVYTDVDRDGTLTGPNF EHYERLVAELTTAKVIASGGIAEKNDLVKLQEIGVAGTIVGKAYYNGNISLDELKAFGG >gi|304426070|gb|AEEM01000016.1| GENE 105 111659 - 112267 657 202 aa, chain - ## HITS:1 COG:lin0574 KEGG:ns NR:ns ## COG: lin0574 COG0118 # Protein_GI_number: 16799649 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Listeria innocua # 1 196 1 196 208 228 55.0 7e-60 MIIVIDYDAGNTANVLRALQKIGVQAELSSNRDKILAADGLILPGVGAYPAAMAELQQRG LVSAIKEAVAKGTPLLGICLGMQVLTEIGLEHQETQGLGFIPGVCREIQATKTMPVPHMG WNDLTVKQDSPLTAGLAGKSVYFVHSYFTDVPKEYIDVTADYGIEVPAMIHKDNVYGAQF HPEKSGDVGLGILEKFIALCGD >gi|304426070|gb|AEEM01000016.1| GENE 106 112338 - 112922 658 194 aa, chain - ## HITS:1 COG:lin0575 KEGG:ns NR:ns ## COG: lin0575 COG0131 # Protein_GI_number: 16799650 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Listeria innocua # 1 194 1 194 194 286 73.0 2e-77 MRQAEIERNTFETKIKLSLNLDAQEPVEIDTGVGFFDHMLTLFARHSRISLVVKADGDLH VDSHHTVEDVGIVLGQALKEALGDKAGINRYGTAFVPMDETLGMASLDLSGRSYLVFDCE FDNPKLGNFDTELVEEFFQALAFNVQMNLHLKILHGKNNHHKSESLFKATGRALREAITI NPEIHGVNSTKGLL >gi|304426070|gb|AEEM01000016.1| GENE 107 112957 - 113601 815 214 aa, chain - ## HITS:1 COG:L0085 KEGG:ns NR:ns ## COG: L0085 COG0560 # Protein_GI_number: 15672587 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Lactococcus lactis # 6 211 5 210 216 233 59.0 3e-61 MTKVNGLLVMDVDSTLIQEEGIDLLGEEAGVGEKIADITARAMNGELDFKQALDERVGLL KGLPESIFDKVLARMHFTNGAEKLVAELHRRGYKVAVVSGGFHETVDVLAKRIGLDYVKA NRLEVKDGVLTGKVLGEVVTKDVKKASLIEWAAENGLELSQTIAMGDGANDLPMIKTAGI GIAFCAKPVVRKEAPYQINEADLYKVIDILDGKN >gi|304426070|gb|AEEM01000016.1| GENE 108 113594 - 114871 1761 425 aa, chain - ## HITS:1 COG:lin0576 KEGG:ns NR:ns ## COG: lin0576 COG0141 # Protein_GI_number: 16799651 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Listeria innocua # 1 425 1 424 427 447 55.0 1e-125 MKRLTGTTEEISKILYQEQLELSKENLDVDDAVRQILEDVKENGDKALKAYSEKFDKITL DNFEVGKELVDQAFEEIDAEVLEALKNAKANIESYHKQQLEKGFEDQPTEGVVRGQLIRP IERVGVYVPGGTAAYPSSVLMNVIPAKIAGVKEIIMITPPQAHFEPAILVAASLAGVDKI YQVGGAQGVAALAYGTETIPRVDKITGPGNIFVATAKKLVYGIVGIDMIAGPSEIGVIAD DTANPKYVAADLLSQAEHDVRARAILVTNSAALADAVEKEIEEQLKTLPREEIARASVEN NGRIIIADSVEAMFELMNQVAPEHLEIAMDNAYDYLDAIENAGSVFLGHFTSEPIGDYYA GANHILPTTSTSRFSSALGVHDFVKRIQYMQYSKIAVNAASHDITTLAYAEGLQAHARAI EVRHD >gi|304426070|gb|AEEM01000016.1| GENE 109 114868 - 115515 759 215 aa, chain - ## HITS:1 COG:lin0577 KEGG:ns NR:ns ## COG: lin0577 COG0040 # Protein_GI_number: 16799652 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Listeria innocua # 5 211 4 211 213 236 59.0 3e-62 MENQITIALTKGRIEKDTVKLLEKAGFDMTFMENKGRNLIFESPDKKFRFLLVKAPDVTT YVRHGVADLGVVGKDLLIEHPTGYLEMLDLNFGLCKFSVASTDSYDPHDHKRKRIATKYP TIATDYFNKKGEDVEIISIQGSVEIAPVIGLADAIVDIVETGNTLVANGLKVYEDICRIS ARLIVNKAALKNNPEIMPFIRKLESIVGNEEVAFK >gi|304426070|gb|AEEM01000016.1| GENE 110 115515 - 116483 1079 322 aa, chain - ## HITS:1 COG:lin0578 KEGG:ns NR:ns ## COG: lin0578 COG3705 # Protein_GI_number: 16799653 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Listeria innocua # 6 310 7 312 392 248 41.0 1e-65 MKKTTLPVGMHDKLFKRARVTYKIERDISDFLMSQGFNRIETPTLEHFEVFSDTITKNNY NFFDKSGELLTLRPDITSQIGRVIASTQVETPIKFSYSGKVFKYNEEMRGLMNEHTQAGV EIVGFPAKEAVFEAIQSAKEALDRADIPSYQFEFSHAAILQTIFETLALPQAVEETLAQA IKDKNITQLNEFTKKYPSEFDEFLKNLPYLFGESHQVLESARELVKNQAILAALTDLENL LNQVSEILPKSNIDLAQIPTMPYYTGVMFKVFGDKVPDAFASGGRYDKLFERFEAKKLTA VGWAVDIDAVYQAVHDNLEGGA >gi|304426070|gb|AEEM01000016.1| GENE 111 116510 - 117568 866 352 aa, chain - ## HITS:1 COG:L0065 KEGG:ns NR:ns ## COG: L0065 COG0079 # Protein_GI_number: 15673188 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Lactococcus lactis # 1 351 1 350 360 315 47.0 1e-85 MTTIKGLRDIEPYVAGSQPSGENLIKLNTNENAYGPSPKVAEVFSHFDVHQLRKYSTLDQ ESLRVVLAKQHGLDPSQIIVGNGSDDVLSMAFLAFFNSDEPVLFPDLTYGFYKVWADLYR INYHEVPLTSDFEINGNDYIADNGGVVLTNPNAPTGIYKSLEAIEAIIKANQDVVVIIDE AYINFGGETALPLLKKYDNVFITRTFSKDASLAGLRVGYGMGSPKLMSVINAVKNSVNPY NVDLIAEKLAVAAVESWDYYEDTCQKIIATRDWFTKELRDLDFSVLESKTNFVLAECPQK DAANLFDYLQAKNIYVRYFPKVERIKNHLRISIGTQAEMEQVIEAIKEYQKA >gi|304426070|gb|AEEM01000016.1| GENE 112 118060 - 118737 637 225 aa, chain - ## HITS:1 COG:jhp0082 KEGG:ns NR:ns ## COG: jhp0082 COG0775 # Protein_GI_number: 15611153 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Helicobacter pylori J99 # 1 225 1 230 230 89 25.0 7e-18 MKKIGMVVAVEIQSVMRKYADKLKREDVRGFKVYSVTFDDKILYITQSGAGEIRAAACTQ LLISFFDVDLIVNYGVVGALTEELKVTNICLVEKVVHYDMDTSAADHCEVGRYLEYQDIY LPTTTKYVQLVKNHHPFIRPVICASGDKFIADETKKRALNHDFKADICDMESAAIVLICD QNNIPNLILKTVSDSITGGAAEFRSSIEKAADICLEILDDILKEL >gi|304426070|gb|AEEM01000016.1| GENE 113 118818 - 120542 1953 574 aa, chain - ## HITS:1 COG:SPy0728 KEGG:ns NR:ns ## COG: SPy0728 COG4477 # Protein_GI_number: 15674783 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Negative regulator of septation ring formation # Organism: Streptococcus pyogenes M1 GAS # 1 574 1 574 574 803 80.0 0 MSSGIILLLVAIVLLVIVAYLVGVIVRKRNDSLIASLEERKQSLFGLPVNEEVEAVKNLH LIGQSQTTFREWNQKWVDLSLNSFSDIENHIFEAENLNDSFKFIRAKHEIDNVESQLNLV EEDINSIREALSVLKEQEEKNSARVKHALDLYETLQASISEKEDNFGSTMSEIEKQLKNI EAEFSQFVTLNSTGDPVEASEVLDRAEEHTIALGQISEQIPAIVAKLEDDFPDQLDDLEQ GYRRLLEQNYHFAEKNIETRFQEVRDSIRANSSELVTLDLDRARDENEHIQEKIDSLYEL FEREIAAHKAALKDSKIIPDYLAHAKANNEQLAHEIKRLSHKYILNDSESLSLRSFTKNL EEIETEVLPIVVAFETQDKPFSELQVTFDRTLKTLAAVEEGQMEVFEQVKNIEEIETVAR QSLEQYINRLHMIKRYMEKRNLPGIPQDFLSAFFTTSSQLEVLIDELSRGRIDIEAVSRL TDVATSAIANLENATYQVVQNATLTEQLLQYSNRYRSFEPSVQSSFEHALKLFEVDNDYQ ASFDEISYALETVEPGVTDRFVSSYEKTREQIRF >gi|304426070|gb|AEEM01000016.1| GENE 114 120648 - 122600 2397 650 aa, chain - ## HITS:1 COG:SP0806 KEGG:ns NR:ns ## COG: SP0806 COG0187 # Protein_GI_number: 15900699 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 650 1 648 648 1108 90.0 0 MTEENKNLAELAKEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEA LAGFATHIEVFIEEDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKV SGGLHGVGSSVVNALSTQLDVSVHRNGKIHYQEYRRGHVVSDLAVIGDTDRHGTTVHFTP DPEIFTETTVFDFDKLAKRIQELAFLNRGLRISITDKREGIEQEKHYHYEGGISSYVEFI NENKEVIFENPIYTDGELDGISVEVAMQYTTSYHETVMSFANNIHTHEGGTHEQGFRTAL TRVINDYARQNKLLKEKDDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKIT NRLFSEAFSRFLLENPQIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLAD CSSNDATMNELFIVEGDSAGGSAKSGRDREHQAILPIRGKILNVEKASMDKILANEEIRS LFTAMGTGFGAEFDVSKARYHKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIA QPPIYGVKVGSEIKEYIQPGANQEIELQEAMARHSVGRSKPTVQRYKGLGEMDDHQLWET TMDPENRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDI >gi|304426070|gb|AEEM01000016.1| GENE 115 122601 - 123161 399 186 aa, chain - ## HITS:1 COG:SPy0726 KEGG:ns NR:ns ## COG: SPy0726 COG0546 # Protein_GI_number: 15674781 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Streptococcus pyogenes M1 GAS # 1 185 1 185 186 248 64.0 6e-66 MNYHDYIWDLGGTLLDNYEMSAQAFVKTLAEFGQSASHDEVYNKLKESTDAAIAQFIPNE PQFLKAYKKLEAEYLKTPVLFAGAHDVLQAIVASGGRNFLVSHRNKQVLDILEKTNLLSY FTEVVTSENGFSRKPSPESMLYLKEKYDIKEALVIGDREIDRKAGQAAGFDTLLVDGKKS LMEIVK >gi|304426070|gb|AEEM01000016.1| GENE 116 123263 - 124474 1072 403 aa, chain - ## HITS:1 COG:SP0803 KEGG:ns NR:ns ## COG: SP0803 COG0772 # Protein_GI_number: 15900696 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 399 2 398 407 453 64.0 1e-127 MARKKYSIDSRIDYSVILPVFFLLLIGLVAIYIATINDYPSTIAKVMTQQVIWILLGCGV AFVVMLFSTEFLWKITPFLYGLGLILMVLPLIFYSPELVESTGAKNWVTIGSVTLFQPSE FMKVSYILMLARCSIWFRQKFKEDSLKNDWKLLGIFALITLPVMVLLGLQKDLGTAMVFS AILAGLILLSGISWWIILPVVIIVALAFGGFMLIFLLPNGKEFLYGLGMDTYQINRISAW LDPFSYAKTIAYQQTQGMISIGSGGLTGKGFNVVDLSVPVRESDMIFTVIAEDFGFIGSA VVMGLYLLLIYRMIRVTFESNNRFYTYISTGFIMMILFHIFENIGAAIGILPLTGIPLPF ISQGGSSLITNLICVGLILSMSYQNNLHREQEITEHFKRSDRY >gi|304426070|gb|AEEM01000016.1| GENE 117 124845 - 125192 556 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|195977886|ref|YP_002123130.1| 50S ribosomal protein L19 [Streptococcus equi subsp. zooepidemicus MGCS10565] # 1 115 1 115 115 218 94 9e-56 MNPLIQSLTESQLRTDIPTFHPGDTVRVHAKVVEGSRERVQVFEGVVISRKGQGISEMYT VRKISSGIGVERTFPLHTPRVEKIEVVRHGKVRRAKLYYLRALQGKAARIKEIRR >gi|304426070|gb|AEEM01000016.1| GENE 118 125403 - 126623 1164 406 aa, chain - ## HITS:1 COG:SPy0723 KEGG:ns NR:ns ## COG: SPy0723 COG0038 # Protein_GI_number: 15674779 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pyogenes M1 GAS # 1 404 1 404 420 369 56.0 1e-102 MIKKLKDNEDYSYLLLLKLVLVSIVIGFLVGFVDTVFGRVLLFLSDFRTEHFNYLIPFLG IIGLLIVFLYQKADERTSKGMGLVFAVGQSQEKEIPLILVPLVTLATWLTHLFGGSAGRE GVAVQLGAAIAHGFSRFFDFENNSRLFLVTGMAAGFAGLFQTPIAAVFFALEILVLGKLQ LQALLPMTVASFVASATSHSLGLEKFSHLVSADLTLDVMIFCKLAVLGIIFGLVGNLFAK LLAIAKEKAKDVMDNPYYRILFGGILLSLIFLICYHGRYSGLGTNLIEASFAGKEIYLYD WLLKLLLTVATLAIGFQGGEVTPLFAIGASLGVVLANLFGLPVEFVAAAGYISVFGSATN TLIAPIFIGGEVFGFANLPYFVVVMIFAYSVNRKHSIYGGQEVLTF >gi|304426070|gb|AEEM01000016.1| GENE 119 126637 - 126915 489 92 aa, chain - ## HITS:1 COG:SP1296 KEGG:ns NR:ns ## COG: SP1296 COG1605 # Protein_GI_number: 15901156 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Streptococcus pneumoniae TIGR4 # 1 87 1 87 88 92 62.0 2e-19 MNLDTIRQEIDHVDQELVALLEKRMQLVNQVVAYKKATGKPILDTSREDAVLQKAASRVE DKAFEQTIVNTFADIMKNSRDYQAKQLDNDLA >gi|304426070|gb|AEEM01000016.1| GENE 120 126956 - 127648 554 230 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1482 NR:ns ## KEGG: GALLO_1482 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 230 1 230 230 368 98.0 1e-101 MKKFKYGYDDLRKILITIGVIAVVSYFVIYVIGHWDIIVTFLQSRSQAEMKAILSQLRSK TILNFVILILLTAVTAAIPFMSNAIFAIFNGVVYGPGIGFLMNVFSNILGNFVFIKILKM IDITDSEKKLKNRFAGIDALENTDFGIILGYMIPIMPTILVNYHVAETKLSWRKWLLYIT IGVAPSSFVYALGGDAVVAGNLKRIVVLLVIVAVVYLVVTYLKRRGKKKA >gi|304426070|gb|AEEM01000016.1| GENE 121 127746 - 129131 1614 461 aa, chain - ## HITS:1 COG:SPy0290 KEGG:ns NR:ns ## COG: SPy0290 COG0719 # Protein_GI_number: 15674464 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pyogenes M1 GAS # 6 461 17 472 472 685 71.0 0 MAKNREYDYGFHDDVNPTYSTGKGLTEEIVRNISKVKNEPDWMLEYRLKSLELFHKLPMP DWGPDLSGIDFDDVIYFQKLSDRRANNWDDVPDKIKQTFERLGIPEAERQFLSGAVAQYE SEVVYHNMKDEFKKQGIIFTDTDTALQEYPDLFKKYFGKIVSNSEHKFAALNGAVWSGGT FIYVPKGVQCEIPVQTYFRINGENAGQFERSLIIVDEGASIQYIEGCTAPNYTTNSLHAA TVEIIVKRDASFRYTTIQNWSDNVYNLVTERGTVEENGMLEWIDGNLGSKVNMKYPCSIL NGPHARTSVLSMAFANYGQHLDAGCKVYHNAPHTSSTLISKSVAKDGGKTDYRGSVYFGK NSSGSKSHIECDTILMDDLSSSDTIPFNEIHNSNVALEHEAKVSKVSEDQLYYMMSRGIS EEEATAMIVNGFMEPITKELPMEYAVELNSLITMSMEGSVG >gi|304426070|gb|AEEM01000016.1| GENE 122 129397 - 129840 724 147 aa, chain - ## HITS:1 COG:SPy0721 KEGG:ns NR:ns ## COG: SPy0721 COG0716 # Protein_GI_number: 15674777 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Streptococcus pyogenes M1 GAS # 1 147 1 147 149 192 76.0 1e-49 MALVKIVYASMTGNTEEIADIVGNKFEELGHTVEVDECTTVDAADFEDADVAIVASYTYG DGELPDEIVDFYEDLADVDLSDKIFGVVGSGDTFYDYFCKAVDEFEAQFALTGATKGADS IKVDLSADDEDIQKLEAFAETISEKVN >gi|304426070|gb|AEEM01000016.1| GENE 123 129882 - 130901 1202 339 aa, chain - ## HITS:1 COG:L87453 KEGG:ns NR:ns ## COG: L87453 COG1816 # Protein_GI_number: 15672269 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Lactococcus lactis # 6 336 15 348 352 268 45.0 8e-72 MDKTTLKDLAKAELHCHLDGSISLGVIRQLAEMANITVPESDKELKQLVVAPENAESLMD YLKTFDFVRPLLQTKEALHLAAYDVARQAAQENVIYTEIRFAPELSMDEDLSASETVEAV LAGLKQAEEEFGIVAKVLVCGMKQSPKEVTRDIFEHVVELAEKGLVGFDFAGNELDFPPA QLADLIKETQALGLPMTFHAGECGCAHYIADSIALDIKRIGHSTAIYNQPELIQEFIEKG VTAELCLTSNLQTKAAKSLDEFPFLALKNAGAKITINTDNRTVSDTNLTKEYALFVKHFG VSVADFLAFNKNAIQASFTNEAQKAELLSKIDNLYETFL Prediction of potential genes in microbial genomes Time: Sun May 29 12:45:10 2011 Seq name: gi|304425971|gb|AEEM01000017.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00027, whole genome shotgun sequence Length of sequence - 99623 bp Number of predicted genes - 99, with homology - 92 Number of transcription units - 46, operones - 24 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 42 - 323 170 ## GALLO_1486 hypothetical protein - Prom 367 - 426 4.5 - Term 412 - 439 -0.8 2 2 Op 1 . - CDS 452 - 1798 1933 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 3 2 Op 2 . - CDS 1817 - 2260 425 ## GALLO_1488 hypothetical secreted protein 4 2 Op 3 5/0.000 - CDS 2264 - 3445 1553 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 5 2 Op 4 2/0.000 - CDS 3442 - 3912 574 ## COG5353 Uncharacterized protein conserved in bacteria 6 2 Op 5 . - CDS 3943 - 6426 2038 ## COG1199 Rad3-related DNA helicases - Prom 6501 - 6560 3.8 + Prom 6465 - 6524 7.4 7 3 Tu 1 . + CDS 6549 - 7379 765 ## COG2819 Predicted hydrolase of the alpha/beta superfamily + Term 7426 - 7465 8.1 - Term 7413 - 7452 5.6 8 4 Op 1 1/0.467 - CDS 7463 - 7861 360 ## COG4947 Uncharacterized protein conserved in bacteria 9 4 Op 2 . - CDS 7892 - 8215 213 ## COG4947 Uncharacterized protein conserved in bacteria 10 4 Op 3 . - CDS 8281 - 9459 1118 ## GALLO_1494 hypothetical protein - Prom 9483 - 9542 5.1 + Prom 9768 - 9827 3.1 11 5 Op 1 1/0.467 + CDS 9878 - 10513 751 ## COG0491 Zn-dependent hydrolases, including glyoxylases 12 5 Op 2 . + CDS 10516 - 11232 660 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 11237 - 11274 8.0 - Term 11221 - 11267 9.5 13 6 Op 1 28/0.000 - CDS 11272 - 12201 926 ## COG2177 Cell division protein 14 6 Op 2 4/0.000 - CDS 12194 - 12886 263 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 15 6 Op 3 . - CDS 12934 - 13944 1257 ## COG1186 Protein chain release factor B 16 6 Op 4 . - CDS 13955 - 14029 89 ## - Prom 14049 - 14108 4.7 - Term 14176 - 14217 0.4 17 7 Tu 1 . - CDS 14443 - 15105 745 ## COG0637 Predicted phosphatase/phosphohexomutase - Prom 15340 - 15399 4.4 + Prom 14995 - 15054 7.1 18 8 Tu 1 . + CDS 15198 - 16055 587 ## COG1409 Predicted phosphohydrolases + Term 16062 - 16097 5.3 - Term 16050 - 16085 5.3 19 9 Tu 1 . - CDS 16121 - 18802 3227 ## COG0474 Cation transport ATPase - Term 19107 - 19155 -0.7 20 10 Op 1 . - CDS 19159 - 19545 286 ## PROTEIN SUPPORTED gi|149007043|ref|ZP_01830712.1| 50S ribosomal protein L19 21 10 Op 2 . - CDS 19614 - 20492 944 ## GALLO_1505 hypothetical protein - Prom 20520 - 20579 3.0 22 11 Op 1 3/0.000 + CDS 20582 - 21883 1361 ## COG1078 HD superfamily phosphohydrolases + Prom 21927 - 21986 5.1 23 11 Op 2 1/0.467 + CDS 22019 - 22828 1014 ## COG0561 Predicted hydrolases of the HAD superfamily 24 11 Op 3 3/0.000 + CDS 22828 - 24042 1529 ## COG2348 Uncharacterized protein involved in methicillin resistance 25 11 Op 4 . + CDS 24042 - 25280 1113 ## COG2348 Uncharacterized protein involved in methicillin resistance + Term 25288 - 25327 6.0 - Term 25406 - 25441 5.1 26 12 Tu 1 . - CDS 25467 - 26225 1103 ## COG0149 Triosephosphate isomerase - Prom 26253 - 26312 7.3 - Term 26315 - 26359 3.0 27 13 Tu 1 . - CDS 26412 - 27608 1401 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 27674 - 27733 10.6 28 14 Op 1 . - CDS 27737 - 28696 865 ## GALLO_1512 hypothetical protein 29 14 Op 2 . - CDS 28680 - 29189 548 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 30 14 Op 3 2/0.000 - CDS 29260 - 30540 1025 ## COG0772 Bacterial cell division membrane protein - Prom 30570 - 30629 7.7 - Term 30594 - 30638 8.1 31 14 Op 4 . - CDS 30652 - 33477 3308 ## COG2352 Phosphoenolpyruvate carboxylase - Prom 33498 - 33557 2.1 + Prom 33725 - 33784 6.2 32 15 Op 1 1/0.467 + CDS 33815 - 35614 1983 ## COG1164 Oligoendopeptidase F 33 15 Op 2 . + CDS 35607 - 36092 424 ## COG0386 Glutathione peroxidase + Prom 36104 - 36163 4.5 34 16 Tu 1 . + CDS 36234 - 37118 882 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) + Term 37121 - 37154 1.0 + Prom 37180 - 37239 4.5 35 17 Op 1 . + CDS 37264 - 38250 1064 ## COG5632 N-acetylmuramoyl-L-alanine amidase 36 17 Op 2 2/0.000 + CDS 38327 - 38809 544 ## COG2606 Uncharacterized conserved protein 37 17 Op 3 . + CDS 38832 - 39461 429 ## COG0406 Fructose-2,6-bisphosphatase + Term 39472 - 39507 4.8 - Term 39452 - 39503 5.7 38 18 Tu 1 . - CDS 39504 - 40412 984 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 40443 - 40502 6.7 + Prom 40589 - 40648 4.6 39 19 Tu 1 . + CDS 40742 - 42232 2056 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 42260 - 42292 4.2 + Prom 42549 - 42608 5.8 40 20 Tu 1 . + CDS 42719 - 43300 395 ## GALLO_1524 putative transcriptional regulator, TetR family - Term 43190 - 43231 1.5 41 21 Tu 1 . - CDS 43341 - 44096 718 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 44140 - 44199 5.1 + Prom 44063 - 44122 5.8 42 22 Tu 1 . + CDS 44246 - 44389 184 ## GALLO_1526 hypothetical protein + Prom 44391 - 44450 8.4 43 23 Tu 1 . + CDS 44496 - 45035 207 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 + Term 45058 - 45084 0.3 - Term 45526 - 45577 6.9 44 24 Tu 1 . - CDS 45584 - 45796 349 ## COG4443 Uncharacterized protein conserved in bacteria - Prom 45830 - 45889 6.3 + Prom 45830 - 45889 10.9 45 25 Tu 1 . + CDS 45912 - 46235 317 ## GALLO_1529 hypothetical protein - Term 46219 - 46269 4.1 46 26 Op 1 13/0.000 - CDS 46291 - 47580 1624 ## COG0826 Collagenase and related proteases - Prom 47602 - 47661 4.4 47 26 Op 2 . - CDS 47712 - 48638 924 ## COG0826 Collagenase and related proteases - Prom 48800 - 48859 7.4 + Prom 48597 - 48656 7.7 48 27 Op 1 . + CDS 48864 - 48944 57 ## 49 27 Op 2 . + CDS 48910 - 49194 273 ## GALLO_1532 hypothetical protein + Term 49207 - 49237 2.0 - Term 49482 - 49506 -1.0 50 28 Op 1 . - CDS 49513 - 49986 780 ## GALLO_1533 hypothetical protein 51 28 Op 2 3/0.000 - CDS 49983 - 50402 502 ## COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain 52 28 Op 3 10/0.000 - CDS 50426 - 51208 743 ## COG0682 Prolipoprotein diacylglyceryltransferase 53 28 Op 4 . - CDS 51208 - 52119 1047 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism - Prom 52273 - 52332 6.3 - Term 52358 - 52402 5.7 54 29 Op 1 2/0.000 - CDS 52484 - 52762 374 ## COG1983 Putative stress-responsive transcriptional regulator - Prom 52791 - 52850 8.7 55 29 Op 2 6/0.000 - CDS 52868 - 53311 324 ## COG3091 Uncharacterized protein conserved in bacteria 56 29 Op 3 . - CDS 53298 - 55430 176 ## PROTEIN SUPPORTED gi|229202349|ref|ZP_04328894.1| SSU ribosomal protein S1P - Prom 55459 - 55518 1.9 + Prom 55392 - 55451 5.7 57 30 Op 1 . + CDS 55647 - 55781 270 ## 58 30 Op 2 7/0.000 + CDS 55787 - 56689 767 ## COG0701 Predicted permeases 59 30 Op 3 . + CDS 56689 - 57501 980 ## COG3689 Predicted membrane protein + Term 57503 - 57551 5.8 - Term 57497 - 57532 6.5 60 31 Tu 1 . - CDS 57568 - 58560 1176 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 58597 - 58656 6.2 + Prom 58550 - 58609 4.0 61 32 Tu 1 . + CDS 58667 - 59047 446 ## COG0789 Predicted transcriptional regulators + Term 59212 - 59271 -0.7 - Term 59026 - 59064 5.1 62 33 Op 1 . - CDS 59085 - 59255 183 ## GALLO_1545 hypothetical protein 63 33 Op 2 2/0.000 - CDS 59262 - 60692 868 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 64 33 Op 3 4/0.000 - CDS 60741 - 61559 952 ## COG0561 Predicted hydrolases of the HAD superfamily 65 33 Op 4 . - CDS 61559 - 62356 994 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 62480 - 62539 4.8 + Prom 62425 - 62484 9.7 66 34 Tu 1 . + CDS 62524 - 63336 940 ## GALLO_1549 conserved hypothetical secreted protein + Term 63352 - 63403 9.1 - Term 63340 - 63389 9.0 67 35 Op 1 6/0.000 - CDS 63422 - 66961 4089 ## COG1196 Chromosome segregation ATPases 68 35 Op 2 1/0.467 - CDS 67092 - 67778 688 ## COG0571 dsRNA-specific ribonuclease - Prom 67878 - 67937 7.7 - Term 68151 - 68206 9.2 69 36 Op 1 3/0.000 - CDS 68297 - 69106 1011 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 70 36 Op 2 8/0.000 - CDS 69107 - 70447 1434 ## COG5002 Signal transduction histidine kinase 71 36 Op 3 . - CDS 70452 - 71162 987 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 71242 - 71301 5.9 72 37 Op 1 16/0.000 + CDS 71467 - 72231 576 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 73 37 Op 2 31/0.000 + CDS 72242 - 73054 1247 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 74 37 Op 3 17/0.000 + CDS 73071 - 73775 955 ## COG0765 ABC-type amino acid transport system, permease component 75 37 Op 4 . + CDS 73787 - 74434 778 ## COG0765 ABC-type amino acid transport system, permease component + Term 74450 - 74488 7.0 - Term 74428 - 74484 6.2 76 38 Op 1 . - CDS 74526 - 75134 818 ## COG0398 Uncharacterized conserved protein 77 38 Op 2 . - CDS 75173 - 75289 109 ## 78 38 Op 3 . - CDS 75382 - 75684 331 ## GALLO_1560 hypothetical protein - Prom 75706 - 75765 5.2 - Term 75865 - 75908 3.1 79 39 Op 1 40/0.000 - CDS 75927 - 77459 1609 ## COG0642 Signal transduction histidine kinase 80 39 Op 2 . - CDS 77404 - 78096 691 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 78122 - 78181 5.4 - Term 78140 - 78179 7.5 81 40 Op 1 . - CDS 78202 - 79080 456 ## GALLO_1563 hypothetical protein 82 40 Op 2 . - CDS 79095 - 79427 202 ## smi_0611 hypothetical protein 83 40 Op 3 . - CDS 79417 - 79701 360 ## - Prom 79729 - 79788 9.9 + Prom 79636 - 79695 9.1 84 41 Op 1 . + CDS 79849 - 79941 58 ## 85 41 Op 2 1/0.467 + CDS 79977 - 80495 524 ## COG1309 Transcriptional regulator + Term 80526 - 80562 2.1 + Prom 80526 - 80585 3.1 86 42 Tu 1 . + CDS 80609 - 82378 2056 ## COG4716 Myosin-crossreactive antigen + Term 82398 - 82444 6.6 - Term 82386 - 82431 8.7 87 43 Op 1 . - CDS 82508 - 83326 789 ## COG3764 Sortase (surface protein transpeptidase) 88 43 Op 2 . - CDS 83372 - 83452 91 ## 89 43 Op 3 . - CDS 83466 - 84908 1748 ## GALLO_2178 putative peptidoglycan linked protein (fimbrial structural unit) (LPXTG motif) - Prom 84929 - 84988 2.0 90 43 Op 4 1/0.467 - CDS 84994 - 86952 1828 ## COG4932 Predicted outer membrane protein - Prom 87115 - 87174 11.2 - Term 87965 - 88000 4.2 91 44 Tu 1 . - CDS 88049 - 91522 3536 ## COG4932 Predicted outer membrane protein - Prom 91622 - 91681 8.5 - Term 91974 - 92039 11.0 92 45 Op 1 . - CDS 92061 - 92675 452 ## GALLO_1572 hypothetical protein 93 45 Op 2 . - CDS 92681 - 93292 283 ## GALLO_1571 conserved hypothetical secreted protein 94 45 Op 3 . - CDS 93297 - 93914 527 ## GALLO_1572 hypothetical protein 95 45 Op 4 . - CDS 93920 - 94537 385 ## GALLO_1572 hypothetical protein 96 45 Op 5 . - CDS 94542 - 96191 1674 ## GALLO_1574 hypothetical protein 97 45 Op 6 . - CDS 96209 - 96550 400 ## GALLO_1575 hypothetical protein 98 45 Op 7 . - CDS 96543 - 96824 274 ## GALLO_1576 hypothetical protein - Prom 96858 - 96917 9.6 - Term 97036 - 97065 2.1 99 46 Tu 1 . - CDS 97089 - 99488 2078 ## COG5520 O-Glycosyl hydrolase - Prom 99550 - 99609 6.4 Predicted protein(s) >gi|304425971|gb|AEEM01000017.1| GENE 1 42 - 323 170 93 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1486 NR:ns ## KEGG: GALLO_1486 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 93 1 93 93 162 100.0 4e-39 MITYITEITFFDSIFRVALKLQRIPEKLLLEIKRQLNQVEHDLKSWEEKFSQSDNFFSDL ERFYRAFFMWILQNNFSKLGQHEAIVSITCKKL >gi|304425971|gb|AEEM01000017.1| GENE 2 452 - 1798 1933 448 aa, chain - ## HITS:1 COG:SPy0651 KEGG:ns NR:ns ## COG: SPy0651 COG0017 # Protein_GI_number: 15674719 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Streptococcus pyogenes M1 GAS # 1 448 1 448 448 826 89.0 0 MSKDYVSIIDVKDHVGEEVTIGAWVANKSGKGKIAFLQLRDGTAFFQAVAFKPNFIEKFG EEEGTEKFNTIKHLNQETSILITGIVKEDSRSKFGYELDVTDLEIVGHSEDYPITPKEHG TDFLMDHRHLWLRSRKQMAIMQVRNAIIYASYEFFDKNGFIKFDSPILSGNAAEDSTELF ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL SHEESLDLQEAYVKALIQGVLDRAPQALEILERDVDLLKKYIAEPFKRVSYDDAISLLQE HENDEDADYEHLEHGDDFGSPHETWISNYFGVPTFVINYPASFKAFYMKPVPGNPERVLC ADLLAPEGYGEIIGGSVREDDYDALVAKMDALEMDKSEYEFYLDLRKYGSVPHAGFGIGI ERMVTFVAGTKHIREAIPFPRMLHRIKP >gi|304425971|gb|AEEM01000017.1| GENE 3 1817 - 2260 425 147 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1488 NR:ns ## KEGG: GALLO_1488 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 147 1 147 147 257 97.0 1e-67 MSKRRKIIIVLVALLGMVLVGLGIHFKPSSPKLTELGDYRVSTDKKTFEIDLASNSSTGY SWVASDVNSEAITLEGVTYHTYPSKSDTVGSGGYSQLTGKVTKSGKQSFKLTYCQDWDGG EKEMTYQVTINSTKNKISKIKLTEVSE >gi|304425971|gb|AEEM01000017.1| GENE 4 2264 - 3445 1553 393 aa, chain - ## HITS:1 COG:SP1544 KEGG:ns NR:ns ## COG: SP1544 COG0436 # Protein_GI_number: 15901387 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 4 391 3 390 395 619 81.0 1e-177 MTNLSNRVLNMEESVTLAASARAKALKAEGRDILSLTLGEPDFVTPKNIQDAAIEAIQNG KASFYTVASGLPELKDAINSYMEKFYGYSINRNQVVVATGAKFILYTFFTTVLNPGDEVI IPTPCWVSYVDQVKMVDGVPVTVATTESNHFKATVEQLEAARTEKTKVLLLNSPSNPTGM IYTRDELEAIGNWAVEHNILILADDIYGRLVYNGNEFTPISSISEAIRKQTVVVNGVSKT YAMTGWRVGFAVAEEEIISGMAKVISQTTSNLTAVSQYAAIEALTGPQDSIETMRQAFEE RLNTIYPLLNEVPGFEVIKPQGAFYLFPNVKKAMEMKGYTDVTAFTTAILEEVGVALVTG AGFGAPENVRLSYATDLDTLKDAVNRLKAFMEK >gi|304425971|gb|AEEM01000017.1| GENE 5 3442 - 3912 574 156 aa, chain - ## HITS:1 COG:SP1545 KEGG:ns NR:ns ## COG: SP1545 COG5353 # Protein_GI_number: 15901388 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 15 156 2 143 143 103 38.0 1e-22 MKKLTPVKQYLLGFSLIFLVLLISVVTVLYLSVKPRLDAEKLATQVAVEKADLTDTSSVE LYNGSETYYSVYGTTSSGEQKIVSVGEDNGEVYVYSVNDGISRKEAKQVATANGATGISK VVYGIYDETPIWEVTATNGYYLVNFETSELMKKEGI >gi|304425971|gb|AEEM01000017.1| GENE 6 3943 - 6426 2038 827 aa, chain - ## HITS:1 COG:SPy0649_2 KEGG:ns NR:ns ## COG: SPy0649_2 COG1199 # Protein_GI_number: 15674717 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Streptococcus pyogenes M1 GAS # 231 827 1 589 589 645 56.0 0 MMQVNSQKYAIVDLEATGAHAMAEIIQVGIVIIENDEIVKTYQTDVNPHEALSEHIINLT GITDEQLAKAPDFSQVAQEVFSLIEDCVFVAHNVKFDANLLAEQLFMEGYELRTPRVDTV ELAQVFYPTFEKYSLGNLADALALDLADAHTAISDAYATAQLFLKLKAKMKSLPKEVLES LLPLADNLLFETGMLIEESFKQAKVLSPKDFQEVGGLVLRQPKTIGEARQLSEAFDVNLA LLGLDAREKQSQFAQLVKDDFQSSQISFLEAQAGLGKTYGYLLPLLQLAQDEQVIVSVPT KVLQDQIMANEVRQIQDVFHIPCQSIKGPGNYIKLDAFADSLRREGDNRLVNRYKMQLLV WLTETETGDLDEIKQKQRFEAYFDQIKHDGNLSEKSLYKDVDFWNRTYENAKHSKLLIIN HAYFLERVQDDKAFAAKKVLVFDEAQKLILNLEQFSRRRVNVTQLVQKLEKYLDAALPTL EKRLIESLSFQLSHLATRFYQNQEVYVTTEDARRLEQTTNELLAFNPDWRYICLEDLLAL FAQPFTDFWFETIVENEKRQTYLNASSEELLNFQEFLPETRKTYMISATLHISPQVSLAD LLGFEHYHFMSIAHDKQNAQHIWIDEEMPNVADISEEEYASAIAERIYQLKQLDEPILVL FNAKKTMLDVSDLLDDMALHHLTQEKNGTAYNVKRRFERGESRILLGTGAFWEGVDFVQA DKMIEVITRLPFENPKDLFVQKISNHLLAQAKSPFYDYSLPLAILKLKQAIGRTMRRDNQ RSAVLILDNRILTKSYGKMINDALAEEFYLSSQKFSKSLTEIKNFLL >gi|304425971|gb|AEEM01000017.1| GENE 7 6549 - 7379 765 276 aa, chain + ## HITS:1 COG:SP0882 KEGG:ns NR:ns ## COG: SP0882 COG2819 # Protein_GI_number: 15900765 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Streptococcus pneumoniae TIGR4 # 10 273 6 269 274 254 47.0 1e-67 MVRKTKLNNYYLEMVEHSLYVPYYDEERRIRVLLPKDYDKEEWASYPVLYMHDGQNIFYS KESFSGYSWKLIPTIKNHKELPKLIVVGIDNAQDNRLNEYAPWMTDVGTTPETASAGGDG MAYGDWVVNTVKPFIDKTYRTKTDRQNTLLAGSSMGGIITAYMGAAYPEIFGNLGVFSLA SWFSERDFLRFCDSHPLHSDSKVYIQVGTKEGDDVDEQFAPNMNQAYIDCSLHYYQSLLR TGLPMENVQLRIMANEIHHEKYWADHFAEFLQFCLN >gi|304425971|gb|AEEM01000017.1| GENE 8 7463 - 7861 360 132 aa, chain - ## HITS:1 COG:SP0884 KEGG:ns NR:ns ## COG: SP0884 COG4947 # Protein_GI_number: 15900767 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 126 8 133 135 156 61.0 1e-38 MGAFHAVNFALRHPDLFDVAVALSGVYDARFFTGDYNGDLAVYYNSPIDYLWNQEDDWFL DHYRHNRFIVAVGQGAWEEPHILDTKRLEEVFAAKFIPAWFDFWGKDVAHDWEWWRVQMP YFLGKLEEENRL >gi|304425971|gb|AEEM01000017.1| GENE 9 7892 - 8215 213 107 aa, chain - ## HITS:1 COG:SP0883 KEGG:ns NR:ns ## COG: SP0883 COG4947 # Protein_GI_number: 15900766 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 101 1 101 111 131 59.0 3e-31 MHFERRSHWSGELGKEMFFNVYGHAGKPIIVFPSSGGSQNEYGDFGMIEACQDFINRGLV RFYTPDSYDNESWLNTWKTGHDKALAHEAYDRYIVNELVPLIRYESN >gi|304425971|gb|AEEM01000017.1| GENE 10 8281 - 9459 1118 392 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1494 NR:ns ## KEGG: GALLO_1494 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 392 1 392 392 756 100.0 0 MSRPMNFVMISPHFPANFETFAVRLHEAGFHTLGIADAPYHELSEGLRAHLTEYYRVDNM EDYDQVYRAVAYFAHKYGRIDRIESHNEYWLELDAQLRTDFNVFGYKTDDMLAVKTKRQM KKIFSEHGLKVAAGDVFHSDDEARVLAEKLGFPVIIKPNSGVGASDTYKIKSSEELEAFF GYQNPKVEYIMEEFIDGDIVTFDGLTDHDGEIVFYSSLEYSEAVLDTVEKDDDMYYYVPR TIPDDLVALGKICVEAFHVKERFFHFEFFRVKETKELMALEVNCRPPGGLTIDMWNYSND FDIFREYANIVKDNLFEAEILRPYNVVYISRKANQTYAHSIDDIWANFGDNIISIQSVPG VFAKIMGEEGILARTQTIEEMRELAQYAQAKA >gi|304425971|gb|AEEM01000017.1| GENE 11 9878 - 10513 751 211 aa, chain + ## HITS:1 COG:SPy0646 KEGG:ns NR:ns ## COG: SPy0646 COG0491 # Protein_GI_number: 15674716 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Streptococcus pyogenes M1 GAS # 1 211 22 232 232 275 62.0 6e-74 MKIFRLLNHVARENTYLLVNDQGIIVVDPGSDVDHIQEKIASFDKPVVAILITHAHYDHI MGLDVIRDAFGHPPVYISDKEASWLYSPKDNFSGLERHADLPDVVLAPAEHHYQYDDDYQ IAGFRFHVRQTPGHSCGSVSLVFPDDELVLTGDALFRETIGRTDLPTGNSEQLLNSIKTE LFSLPNHFMVYPGHGRETTIAHEKNFNPYFN >gi|304425971|gb|AEEM01000017.1| GENE 12 10516 - 11232 660 238 aa, chain + ## HITS:1 COG:L130660 KEGG:ns NR:ns ## COG: L130660 COG0596 # Protein_GI_number: 15673278 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Lactococcus lactis # 1 237 12 245 249 168 42.0 7e-42 MKKIKKFTLSFLLIIATLIAISGVVLHQKTYQASSEAQTAAKTAESTKDYLFFQSSGTAK ASIVFYQGALVEETAYASLAKNLAQEGFDVYLLKTPLNLPVLSSNKALKVIAKNNLSNVY LAGHSLGGVVTCLNAADSESQAISGLILLASYPSEKNDLSDSDLKVLSITASNDKVLQWD NYEKAKKRLPDDTEYLTIVGGNHSDFGDYGKQTKDGKATISQTEQENQIISAITDFID >gi|304425971|gb|AEEM01000017.1| GENE 13 11272 - 12201 926 309 aa, chain - ## HITS:1 COG:SPy0645 KEGG:ns NR:ns ## COG: SPy0645 COG2177 # Protein_GI_number: 15674715 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Streptococcus pyogenes M1 GAS # 1 308 4 311 312 419 63.0 1e-117 MIRNFFRHLWESIKSLKRNVWMTIASVSSVTITLTLVGVFAAVLLNVERIATGIENNIQI NVYLDVDSTDSSETTTNEAGETVANDSYHQVYDQISKVSGVESVTYSSKDEQLEKLQQTY GDDWSLFDGDSNPLQDVYIVEADSPSDVKKVAKKIANIEGVESVDYGGSNSDQLFSIAKF IRTWGFAGTILLVVVAIFLISNTIRMTIMSRQRDIEIMRLVGAKNSYIRGPFFFEGAWVG LLGAIVPSIIIYFAYKTVYSSVNPQFEVQGLSLYPIDTFLPLVIGGMFLVGIIIGALGSV ISMRRYLKI >gi|304425971|gb|AEEM01000017.1| GENE 14 12194 - 12886 263 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 6 220 7 217 311 105 29 7e-22 MALIEMNGVTKKYHRSTTALRDITVSVNPGEFVYIVGPSGAGKSSFIKLLYREEKVSAGT LKVGEFNLTKLKKRDVPILRRSIGVVFQDYKLLPKKTVFENVAYAMQVIGEKPREIKKRV PEVLDLVGLKHKMRSFPDQLSGGEQQRVAIARAIVNNPKVLIADEPTGNLDPEISWEIMQ LLERINLQGTTVLMATHNKQIVDNLRHRVIAIEDGRIVRDEEEGEYGYND >gi|304425971|gb|AEEM01000017.1| GENE 15 12934 - 13944 1257 336 aa, chain - ## HITS:1 COG:SPy0643 KEGG:ns NR:ns ## COG: SPy0643 COG1186 # Protein_GI_number: 15674713 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Streptococcus pyogenes M1 GAS # 1 336 1 336 337 580 89.0 1e-166 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE DDSVQAELEESLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRM YTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAK RRHTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIV VASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPY TMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWRID >gi|304425971|gb|AEEM01000017.1| GENE 16 13955 - 14029 89 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEVAEIRQKIVENQEKLTSFRRSL >gi|304425971|gb|AEEM01000017.1| GENE 17 14443 - 15105 745 220 aa, chain - ## HITS:1 COG:SPy0640 KEGG:ns NR:ns ## COG: SPy0640 COG0637 # Protein_GI_number: 15674711 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Streptococcus pyogenes M1 GAS # 1 206 3 208 218 202 49.0 5e-52 MIKAIIFDMDGVLFDTENFYFKRRETFLGSKGISVKHLPPKYFIGGRMDQFWENILGDKI ANYDTKALEAEYTAYKNTHRPAYDELVFADASTVLATLTAKGIVLALASNSAREDVEDAL EKSGLKQYFTHILSGSEFAEGKPNPAIYNAACEKLGFAKKDIVIIEDSQKGIQAGVAAGV RVLAIRDKVFGVDQSKADVLIDSLTEALQFVENENHNSSI >gi|304425971|gb|AEEM01000017.1| GENE 18 15198 - 16055 587 285 aa, chain + ## HITS:1 COG:L197075 KEGG:ns NR:ns ## COG: L197075 COG1409 # Protein_GI_number: 15672952 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Lactococcus lactis # 3 229 6 243 243 169 44.0 6e-42 MTKLAIMSDLHIDLNQFDDFEIQTLIDTLNAEKISHLHLAGDISNHFYDISYPFLETMSK HFDVTYNLGNHDMLDLDDKVIDDLDFQIIPLGQKTLLAFHGWYDYSFFPEKSEAETIKFK NTFWFDRRLNRNFSDKELTHQTTQKLDRTLSTIANDVIVSLHFVPHYQFTLQHERFKPFN AFLGSQVFHDIFKKHQVNNVIFGHTHHSIASQQIDNITYHAKPLGYIREWDLTIDYVNQH PELNPNQTWNLSKRYNIVKKLDDFTDYKRQNLAQEFRKSMTIFEL >gi|304425971|gb|AEEM01000017.1| GENE 19 16121 - 18802 3227 893 aa, chain - ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 1 893 1 893 893 1429 83.0 0 MSKEQSKALFYTQGKDETLEALQSSREGLSTAEAQKRLDEYGHNELEEGQKRGLLAKFLD QFKDLMIIILLVAAALSVITEGTEGLTDALIILAVVILNAAFGVYQEGQAEAAIEALKDM SSQIARVRRDGHVVEIDSRELVPGDIVMLEAGDVVPADMRLLEAASLKIEEAALTGESVP VDKDLSVDVAADAGIGDRVNMAYQNSNVTYGRGSGVVVNTGMYTEVGKIADMLANADETD TPLKQNLNQLSKVLTYLVVGIAIITFIVGVFVRGEAPLEGLMTSVALAVAAIPEGLPAIV TIVLSMGTTTLAKRNSIVRKLPAVETLGSTEIIASDKTGTLTMNQMTVEKVYTNGQLQSS ASEIAKDNNTLRIMNFANDTKIDPNGKLIGDPTETALVQFGLDHSFDVREALKEEPRVAE LPFDSERKLMSTIHKEADGKYFVAVKGAPDQLLKRVTRIEENGHVREITADEKKAILAVN KELAQKALRVLMMAYKYVSEIPTLESEIVESDLIFSGLVGMIDPERPEAAKAVAVAKEAG IRPIMITGDHQDTAEAIAKRLGIIEDDGQDHVFTGAELNELSDEEFQKVFKQYSVYARVS PEHKVRIVKAWQNEGKVVAMTGDGVNDAPSLKTADIGIGMGITGTEVSKGASDMVLADDN FATIIVAVEEGRKVFSNIQKSIQYLLSANMAEVFTIFFATLFGWDVLQPVHLLWINLVTD TLPAIALGVEPAEPGVMSHKPRGRKSNFFDGGVMGAIIYQGIFQTVLVLGVYGWALMFPE HAANRMVHEDALTMAFATLGLIQLVHAFNVKSVYQSIFTVGAFKNRTFNWAIPVAFLLLM VTIVVPGFNDLFHVSHLSVTQWLAVIIGSLLMVVLTEIVKAVQRALGQDEKAI >gi|304425971|gb|AEEM01000017.1| GENE 20 19159 - 19545 286 128 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149007043|ref|ZP_01830712.1| 50S ribosomal protein L19 [Streptococcus pneumoniae SP18-BS74] # 5 127 1 120 121 114 46 1e-24 MKLHIKNKIDLDGQVELVEQSYPVKLTEKNGYIYLTYTNEEEETVMLKCNEQELVMTRYS TPKSIMRFHRENPALVAIPTPVGLQHLQTQTSVYELDAEQQHLKIHYQLKQVDGESVFAN YQLEINWA >gi|304425971|gb|AEEM01000017.1| GENE 21 19614 - 20492 944 292 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1505 NR:ns ## KEGG: GALLO_1505 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 292 1 292 292 494 99.0 1e-138 MTNELILRMIQLFLIFLIFWTMGNILVNAKKHGINLKEKFWTGLWIGYVTDLLDTLGIGT FATSTALFKATKLVEDDKKIPATLSTAHIIPVLIEALCFITIVEVDLTTLFAMAMASFLG AFVGTRITKNWNTRQVQRVLGILLIVAAFIMVYRLIANPGTNISESAHGLHGIWILVGVM FNFTVGILMTMGLGNYAPELIFFSMLGINPSVALPVMMLDAAVIMSASTTDFIKSGRVNW PGVLGIIIGGSFGVLTAAFFLSKLDINHFKILIVFIALFTGTSLLRSSAIKR >gi|304425971|gb|AEEM01000017.1| GENE 22 20582 - 21883 1361 433 aa, chain + ## HITS:1 COG:SPy0621 KEGG:ns NR:ns ## COG: SPy0621 COG1078 # Protein_GI_number: 15674697 # Func_class: R General function prediction only # Function: HD superfamily phosphohydrolases # Organism: Streptococcus pyogenes M1 GAS # 1 429 1 429 433 676 77.0 0 MNEKVFRDPVHNYITVNHQVIYDLINSKEFQRLRRVKQVSTTVFTFHGAEHSRFSHCLGV YEIARRVTEIFDDKFPDIWNSDDNLLTMVAGLLHDVGHGAYSHTFEKLFDTDHEAVTQEI ITSPDTEINTILRRVSPDFPEKVASVINHTYHNKQVVQLISSQIDCDRMDYLLRDSYYSG ANYGQFDLNRILRVIRPTEDGIVFEYNGMHAVEDYIISRFQMYMQVYFHPASRGMEVLLQ NLLKRAKYLYQTDTDFFERTSPNLIPFLENHANLADYLALDDGVMNTYFQTWMTAEDEIL ADLASRFVNRKVFKSVTFEESSRKELNHLVDLVKSVGFDPDYYTGIHVNFDLPYDIYRPE KEEPRTEINMIQKDGSVVELSTISPIVKTLTGTIYGDRRFYFPKEMLVDNDLFAVDKKAF MSYISNEHFVYHN >gi|304425971|gb|AEEM01000017.1| GENE 23 22019 - 22828 1014 269 aa, chain + ## HITS:1 COG:SPy0617 KEGG:ns NR:ns ## COG: SPy0617 COG0561 # Protein_GI_number: 15674695 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 268 1 268 269 414 78.0 1e-115 MSIKLVAVDIDGTLLTNDRKVTPEVFEAVQDAKKQGVKVIIATGRPIPGVQTLLDELNLK ESGDYVITFNGGLVQDTATGENIITETMTYDDYLDIEFLSRKLDVHMHAITKEGIFTANR NIGKYTVHESTLVNMPIFYRTPEEMGDKEIIKMMFIDEPEILDAAIAKIPQEFYDKYTIV KSTPFYLEFMNKSASKGNAITHLAEKMGLSKDQTMAIGDAENDRAMLEAVGNPVVMENGT PELKEIAKYITKSNEESGVAYALREWVLK >gi|304425971|gb|AEEM01000017.1| GENE 24 22828 - 24042 1529 404 aa, chain + ## HITS:1 COG:SPy1205 KEGG:ns NR:ns ## COG: SPy1205 COG2348 # Protein_GI_number: 15675170 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pyogenes M1 GAS # 5 404 9 407 407 510 63.0 1e-144 MYSYKIGISAEEHDNFAKSSNQTNLLQSSNWAKIKDNWDNERIGFYKDDALVASASILIK ALPLGFTMLYIPRGPIMDYSDKELVAFVISSLKKYGKTKRSLFIKIDPALLLKQYKIGEE VDENKDTLTAIDNLKAAGCEWTGRTTTIAESIQPRFQANVYTQEDMTATFPKHTKRLMKD AIHRGVITSRGTIDDVKAFADVVALTENRKGVALRNEDYFRKMMETYGDDAYLHLAKVNL PKRLTEYKEQLAQIEKDLSETAEHQKKRLTKLTQQKNSVTKYITEFEEFVEKYPDELIIA GILSVSFGNVMEMLYAGMNDEFKKFYPQYSLYPKVFEDAYADDIIWANMGGVEGTLDDGL TKFKSNFNPTIEEFIGEFNIPVNPFLYKLSNLAYNIRKQRRNSH >gi|304425971|gb|AEEM01000017.1| GENE 25 24042 - 25280 1113 412 aa, chain + ## HITS:1 COG:SP0616 KEGG:ns NR:ns ## COG: SP0616 COG2348 # Protein_GI_number: 15900524 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 3 411 2 410 410 505 63.0 1e-143 MTSLEIIEKKVFETFCNTVSYKSFMQSVEMADLLKKRGYQVTYLGLKDEETLQVAAVLFS LPMTGGLHMEINSGPVSRDKHYLKQFYQELQSYAKENGALELLVKPYDTYQHFDTTGQPT DQENTALLDDFLSLGYQHDGLLTGYPGGEPDWHYVKDLTDLDEKTLLKSFSKKGRPLVKK AKTFGITLRKLNRDELPLFKEITSATSDRRDYDDKSLDYYQDFYDSFGDSCEFMVASLNF QDYLAHLETDKAKLDQRIEKLRTAIENNNVSEKKQNQLRELSSQSATFDTRMAEAKEFIS KYGSQNVVLAGSLFVYTKQEAVYLFSGSYPEFNKFYAPALLQEYAMLEAIKRGITTYNLL GITGEFDGSDGVLRFKQNYNGYITRKMGTFRYYPHPLKYKLIHNLKKILRRH >gi|304425971|gb|AEEM01000017.1| GENE 26 25467 - 26225 1103 252 aa, chain - ## HITS:1 COG:SP1574 KEGG:ns NR:ns ## COG: SP1574 COG0149 # Protein_GI_number: 15901416 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 252 1 252 252 431 91.0 1e-121 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSELVEAGIAAPALDLSTVLAAAKGSNL KVAAENCYFENAGAFTGENSPKVLSEMGTDYVVIGHSERREYFHETDEDINKKAKAIFAN GMLPIICCGETLETYEAGKAAEFVGGQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSAS QDDAQKMCKVVRDTVAADFGQAVADKVRVQYGGSVKPENVAAYMACPDVDGALVGGASLQ PESFLALLDFVK >gi|304425971|gb|AEEM01000017.1| GENE 27 26412 - 27608 1401 398 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 396 1 405 407 544 66 1e-154 MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSAVNQPKDYASIDAAPEER ERGITINTAHVEYETAKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTR EHILLSRQVGVKYLIVFMNKVDLVDDEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALK ALEGDTHYEDIIMELMDTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTV KVNDEVEIVGIRDDIQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGIQRDEIERGQVLAKP GSIHPHTKFKGEVYILTKEEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEMVMPGDN VTIDVELIHPIAVEQGTTFSIREGGRTVGSGIVSEIEA >gi|304425971|gb|AEEM01000017.1| GENE 28 27737 - 28696 865 319 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1512 NR:ns ## KEGG: GALLO_1512 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 319 1 319 319 592 99.0 1e-168 MTISNDFEKIATKNKRKNRLKTVGISVGAMLISALIIFLGLRSLTERHAEMVKENYLLRS EIAYPNIDYTTWGFEANSEFTGTFYSHRSKNIDGISVPFEEYQGNYSIIGPMSASQNEGL EEGDSNSSNYTHGNLYKVPIFYNVNASAKTVSMEVTQDISKVAEMTGQAVEVAITFDKPY TYQEITDMVPDNLLVNWYWIGTSSTVDTANLALDAQLGFAPSSINDYATDFKNFKSNLKK AIESGVVDSRYSIEDETLSLEDDAKTYLKNNSNYKTATFSGVILTGCAENFAQLEDKDWI YASNIGQSVTIQPYHTLTK >gi|304425971|gb|AEEM01000017.1| GENE 29 28680 - 29189 548 169 aa, chain - ## HITS:1 COG:L0142 KEGG:ns NR:ns ## COG: L0142 COG1595 # Protein_GI_number: 15674148 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Lactococcus lactis # 4 163 2 159 164 89 36.0 4e-18 MSRIKLDGYEVELLGFAEEISYYLQKSGASAENARDISQDVLVKMLESEIVLPFEKMRAW MYRVAVRLYIDRYRRDKKYWEILQREFFKDENVIAFDSPDYEPLYQAVALLKEKYRLVID LYYFQNLSIKEICQVLGISASKAKIDLMRGRRDLQKILEKEGYYYDDFK >gi|304425971|gb|AEEM01000017.1| GENE 30 29260 - 30540 1025 426 aa, chain - ## HITS:1 COG:SPy0609 KEGG:ns NR:ns ## COG: SPy0609 COG0772 # Protein_GI_number: 15674690 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 425 11 433 434 630 76.0 1e-180 MKIDKRHLLNYSILVPYLILSVIGLIVVYSTTSATLVQYGLNPFASVLNQGLFWIVSLIA ILFIYKLKLNFLKNSRTLTMTMMVEIILLLIARFFTKTVNGAHGWIVIGPISFQPAEYLK IIIVWFLAFTFARRQELIETYDYQALTKRKWFPRKWSDLKDWRVYSLVMILLVAAQPDLG NAAIIVLTALIMYSVSGVGYRWFSAILATVTALSAAFLGLIAVVGVKTMEKVPVFGYVAK RFSAFFNPFDDLTDSGHQLAHSYYAMSNGGWFGRGLGNSIEKAGYLPEATTDFVFSIVIE ELGLIGAGLILALLFFLILRIMHVGIKAKNPFNSMIALGIGGMMLMQTFVNIGGISGLIP STGVTFPFLSQGGNSLLVLSVAIGFVLNIDANEKREEIIREAEEELKAKEITQEYDDNVI DLDSFY >gi|304425971|gb|AEEM01000017.1| GENE 31 30652 - 33477 3308 941 aa, chain - ## HITS:1 COG:SPy0608 KEGG:ns NR:ns ## COG: SPy0608 COG2352 # Protein_GI_number: 15674689 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 941 1 920 920 1285 71.0 0 MTIKKLENNSTQSIITEEVKVLKDLLDETTHQMVGDEVFAKIQNIVELSASDEYVKLEKL VAQLTNDEMVVVSRYFSILPLLINISEDVDFAYEINYQNNTNQDYLGKLSLTVDMVSESE NSKEILENVNVVPVLTAHPTQVQRKTVLELTNHIHDLLRKYRDVRAGVVNRDKWYTDLRR YIEIIMQTDIIREKKLKVKNEITNVMEYYNTSLIQAITKLTSEYERLAAEKGIDLENPKP ITMGMWIGGDRDGNPYVTAETLRLSATVQSEVIINYYIEKLTGLYRTFSLSTTLTNISPE VEKLAELSSDKSIYRENEPYRKAFNYIQSKLIQTLIELKAGPAISQRVLESSNNISSDVY TSTNNASVVTKYLQTKFSKVSSELQEEIPSYKTAKEFKDDLLIIKQSLLDNGDDALLTGD FSELLQAVDVFGFYLATIDMRQDSSVNEACVAELLKSANIVEDYSALSEEEKVKVLLKEL QEDPRTLSSTNAEKSEQLQKELAIFQTARYLKDKLGDEVIKQHIISHTESVSDMFELAIM LKEVGLLDNQKARVQIVPLFETIEDLENSRAIMEEYLDYDIVRRWVSANKGYQEIMLGYS DSNKDGGYLSSVWTLYKAQNELTRIGSERGIKVTFIHGRGGTVGRGGGPSYEAITSQPFG SIKDRIRLTEQGEIIENKYGNKDVAYYNLEMLVSATIDRIVTRMITNPDEIDDFRATMDG IVTYSNGVYRDLVFGNPHFYDYFFEATPIKEVSSLNIGSRPAARKTITEISGLRAIPWVF SWSQSRIMFPGWYGVGSAFKNFIDAEEGNLAKLQHMYEKWPFFHSLLSNVDMVLSKSNMN IAFQYAQLAESEEVRDVFNTILDEWQLTKNVILAIEKHEDLLEENPSLQASLDYRLPYFN VLNYIQIELIKRLRHEELDEDYEKLIHTTINGIATGLRNSG >gi|304425971|gb|AEEM01000017.1| GENE 32 33815 - 35614 1983 599 aa, chain + ## HITS:1 COG:SPy0606 KEGG:ns NR:ns ## COG: SPy0606 COG1164 # Protein_GI_number: 15674688 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Streptococcus pyogenes M1 GAS # 1 598 1 598 599 961 82.0 0 MELKKRSEFPENELWDLSALYQDREDFLRSIEKTLEDINLFKRNYEENLTTLEDFTRALY EIEQIYIEMSHIDNYSFMPQTSDFSNEEFAQIAQAGADFFTKANVALSFFDTALATADLE ILDALEENPHFSAAIRQAKIQKSHFISPEVEKALTNLGEVFKAPEDIYTKMRAGDFEMED FEVDGKVYQNSFVTYENFYQNHENAQVREKAFRSFSAGLRKHQNAAASAYLAQVKSEKII ADMRGYDSVFDYLLAEQEVNRDMFDRQIDLIMTEFAPVAQKYLKHVAQVNGLKKMTFADW KLDLDSELNPEVTIDDAYDLVMKSVAPLGDEYTQEVSRYQEERWVDFAANANKDSGGYAT DPYKVHPYVLMSWTGRMSDVYTLIHEIGHSGQFIFSDNNQSYFNTHMSTYYVEAPSTFNE LLLSDYLEKQFDTPRQKRFALAHRLTDTYFHNFITHLLEAAFQRQVYNLIEDGKTFGATQ LNKIMKDVLSQFWGDAIDIDDDAALTWMRQSHYYAGLYSYTYSAGMVISTAGYLNLKNNP NGANDWLNFLKSGGSRTPLDTAKLIGADISTAQPLRDTIQFLSDTVDQIIAYTKELNHD >gi|304425971|gb|AEEM01000017.1| GENE 33 35607 - 36092 424 161 aa, chain + ## HITS:1 COG:SPy0605 KEGG:ns NR:ns ## COG: SPy0605 COG0386 # Protein_GI_number: 15674687 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Streptococcus pyogenes M1 GAS # 1 158 1 158 159 253 74.0 1e-67 MTNLYDFTVKAQDGSDVQLSKYQGKILLIVNTATGCGLTPQYEGLQKLYDTYHDKGFEIL DFPCNQFLNQALGNADEINTFCTLNYQTTFPRFAKIKVNGKEADPLYDWLKSEQKGPLGK RIEWNFAKFLIDQNGNVIKRFSSKTEPETIVTEIESLINDK >gi|304425971|gb|AEEM01000017.1| GENE 34 36234 - 37118 882 294 aa, chain + ## HITS:1 COG:SPy0601 KEGG:ns NR:ns ## COG: SPy0601 COG3757 # Protein_GI_number: 15674684 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Streptococcus pyogenes M1 GAS # 1 281 1 281 282 408 71.0 1e-114 MRRRIKPIVVVVFFALCGLLLVIGKAHSDSLQKQQLASAKDSIPTVSSTSTTTTSTSETD EDFVLNPIIDISGWQLPSEIDYDTLSQNISGAIVRVYGGSQISKDSNAAYTTGIDKSFKT HIKELQKRNVPVAVYSYALGTTVKEMKEEAKTFYENASPYSPTFYWIDVEEATMSDMNKG VQAFLKELKKLGAENVGIYIGTYFMDEQEISVDGFDAVWIPAYGSDTGYYDAAPQTDLDY DLHQYTSQGYINGFSSPLDLNQIAVTKDTKTTYEKLFGTTSTSSSSTSSSSSSK >gi|304425971|gb|AEEM01000017.1| GENE 35 37264 - 38250 1064 328 aa, chain + ## HITS:1 COG:lin2703 KEGG:ns NR:ns ## COG: lin2703 COG5632 # Protein_GI_number: 16801764 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Listeria innocua # 49 328 12 270 770 137 33.0 3e-32 MPTRNYSRRKRQQKSQIITIVGLVTAAVALVLILAKLIFSGVTTLASDGSLDLSNANSYD VSETATVSTSDAVMYTNDGSSSKISENTAITISAYYYDATLDDEDITLAQFSMNGDTYYI DTNDISLEQDNTINAYIAETLGYSHTDITDDIESSFEQAAYKTDDGKPLGVIIHDTGVDN STIESEVNYMVQSYDEEGVFVHSFIDSDTILRIADEDYKAQGAGANANPYYIQFELTHED SQKGFAEQLANAAYYTAYMLKKYDLPVTLGQEDGEGTIWTHEMVSLYLGGTDHVDPTDYW TETANDYFGTDYDVEDFVELVQAYYNAL >gi|304425971|gb|AEEM01000017.1| GENE 36 38327 - 38809 544 160 aa, chain + ## HITS:1 COG:SPy0599 KEGG:ns NR:ns ## COG: SPy0599 COG2606 # Protein_GI_number: 15674682 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 155 1 155 159 221 79.0 3e-58 MAKKAKLKKTLVDQILDKAKIEHDSLAINALEGDLPDDIEKSDIFKTLALTGDKTGPLIG IVQITEHLSEKKLAKVSGNKKVSMIPQKNLQKTTGYIHGANNPVGIHQKHNFPIFIDNRA LEMGTMIVSAGEIGRSIRIDSQTLADFVGASFADLIDDSH >gi|304425971|gb|AEEM01000017.1| GENE 37 38832 - 39461 429 209 aa, chain + ## HITS:1 COG:SPy0598 KEGG:ns NR:ns ## COG: SPy0598 COG0406 # Protein_GI_number: 15674681 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 204 1 204 207 265 62.0 3e-71 MKFYFVRHGKTQWNLEGRFQGANGDSPLLEESVHDLEKLGDYLQDVKFDAVFSSDLKRAS DTCKIIMSRSHYPKPISFQPSLREWHLGRLEGSKIATITSIYPQQMQAFRHNLAKFDNDV FDAESVYQTTKRVESFIKSMKNQPYQNVLLVGHGANFTASIRTLLGYEPAVLRAKGGLDN GSVTILETKDFKTFTCLKWNDTSYKQKKS >gi|304425971|gb|AEEM01000017.1| GENE 38 39504 - 40412 984 302 aa, chain - ## HITS:1 COG:SPy0596 KEGG:ns NR:ns ## COG: SPy0596 COG1011 # Protein_GI_number: 15674680 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 300 300 584 93.0 1e-167 MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSKINQAYIRFRHYSDVGFPRVMAGEWT TEYFRFWRCKETLLEFGYREIDEATGVHFQEIYEEELENITMLDEMRMTLDFLKEKGVPM GIITNGPTEHQLKKVKKLGLYDYVDPKRVLVSQATGFQKPEKEIFNLAAEQFDMNPATTL YVGDSYDNDVVGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPD NKFIFDVNDKKNPILEMGINNGLMMAAERLLESNMSIDKVVILLRLDKQQEKVLRLKYAR NN >gi|304425971|gb|AEEM01000017.1| GENE 39 40742 - 42232 2056 496 aa, chain + ## HITS:1 COG:SPy0595 KEGG:ns NR:ns ## COG: SPy0595 COG1190 # Protein_GI_number: 15674679 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Streptococcus pyogenes M1 GAS # 1 496 1 496 497 865 86.0 0 MSNEHIEELNDQQIVRREKMAALAEQGIDPFGTRFERTATSGQLKEKYADKTKEELHEIN KTATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGDENYQIFKKADLGDFLGIEG EIMRTDMGELTIKATHLTHLSKALRPLPEKFHGLTDVETKYRKRYLDLISNRESFDRFVT RSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQDMDMVLRIALELHLKR LIVGGMEKVYEIGRVFRNEGMDVTHNPEFTMIELYEAYADFKDIMDITEGIIQHASKAVN GDGPISYQGTEIAIDQPFKRVHMVDAIKEVTGVDFWKEMTLEEAQAIAKEKNVPVEKHFT SVGHIINAFFEEFVEETLIQPTFVYGHPVEVSPLAKKNAEDPRFTDRFELFIMTKEYGNA YSELNDPIDQLSRFEAQAKAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLVMLL TDTTTIRDVLLFPTMK >gi|304425971|gb|AEEM01000017.1| GENE 40 42719 - 43300 395 193 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1524 NR:ns ## KEGG: GALLO_1524 # Name: not_defined # Def: putative transcriptional regulator, TetR family # Organism: S.gallolyticus # Pathway: not_defined # 1 193 1 193 193 366 100.0 1e-100 MAKYTREKIIDAFFALASENPEKSNFTISEIASKAGISRQAIYQKHFKNFNEIILYVHNL IDKEICQVFNNYNPSSNINPLDYIAENVLPAIWKERQWIRCLYTTNIDPNFEDFIVSTYT KWGASNIVPKEGQFNLSNEEVVQLVTSLTVVVIKNWITQDNPSPPKQFKGEFLRLIRTPI YEYINHTAVTVSD >gi|304425971|gb|AEEM01000017.1| GENE 41 43341 - 44096 718 251 aa, chain - ## HITS:1 COG:MA3051 KEGG:ns NR:ns ## COG: MA3051 COG1011 # Protein_GI_number: 20091869 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanosarcina acetivorans str.C2A # 7 219 8 208 217 85 29.0 9e-17 MADLQYKNYIFDFYGTLVDIWTDEDDEKLWKRMAALYAAYGADYSAAELKANYDNHIKRQ ENQLRKRSQLEHVEVDLVVVFIELLLEAPHKHATDSIILDLETWGNLIAQTFRMLSRKKL QAYENTLATLKTLKEVGATVILLSNAQRAFTQAEIEMTGCREFLDKIYISSDYKMKKPQV EFMNLVLNDNQLNPEETVMVGNDFTSDMAIAQAAGIDGILLNTFPYNQSEIENLNTMNAK VIEDISELVVE >gi|304425971|gb|AEEM01000017.1| GENE 42 44246 - 44389 184 47 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1526 NR:ns ## KEGG: GALLO_1526 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 47 1 47 47 65 100.0 7e-10 MSKNIVYFISAIIFLAYGLLEHKAIFIILGIVFGVIGVADYLNHKGK >gi|304425971|gb|AEEM01000017.1| GENE 43 44496 - 45035 207 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 4 178 3 179 190 84 32 2e-15 MSRNKLLMLIFPAFGAALIAILSQIVIPIGTVPFTLQTLAVGLIASIFRPREATLSVALY LLLGAIGLPVFAGGSGGIAALSGPTSGFLWGFLFYAALTSYLTNTESSLVKIFVSNLLGN CLAFICGVIGLHFLANMSWQAAFLAGVVPFIIPEIGKLLAITAISKPLFISLKNTAYFA >gi|304425971|gb|AEEM01000017.1| GENE 44 45584 - 45796 349 70 aa, chain - ## HITS:1 COG:SPy0593 KEGG:ns NR:ns ## COG: SPy0593 COG4443 # Protein_GI_number: 15674678 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 69 1 69 70 112 84.0 1e-25 MSEFKFEIVEHLLTLSESDKGWTKELNRVSFNGAEPKFDIRSWSPDHSKMGKGVTLTNEE FKIILDAFRG >gi|304425971|gb|AEEM01000017.1| GENE 45 45912 - 46235 317 107 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1529 NR:ns ## KEGG: GALLO_1529 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 107 1 107 107 174 100.0 7e-43 MKNLIKRLKRQAQAYIDFRAQPAADINLKTHKIITTIKEAQEKQLALHAIYKDGSFTGDL VKYDPKNDKLILKNFQKNISTIIAISDINRLTLVPPTVRKSQELDKK >gi|304425971|gb|AEEM01000017.1| GENE 46 46291 - 47580 1624 429 aa, chain - ## HITS:1 COG:SPy0591 KEGG:ns NR:ns ## COG: SPy0591 COG0826 # Protein_GI_number: 15674677 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Streptococcus pyogenes M1 GAS # 7 428 6 427 428 756 84.0 0 MSEKTLKRPEVLAPAGTLEKLKVAVDYGADAVFVGGQAYGLRSRAGNFTMEELQEGINYA HAHGAKVHVAANMVTHEGNETGAGEWFRELRDMGLDAVIVSDPALMVICLTEAPGLEVHV STQASTTNYEAFAFWEEIGVSRVVLAREVGIAEIEEIRKHTSLEIEAFVHGAMCIGYSGR CVLSNHMSHRDANRGGCSQSCRWKYDLYDMPFGQERKSLEGEIPEPFSMSSVDMCMIEHL PDLIENGVDSFKIEGRMKSIHYVSTVTNCYRAAVDAYLESPAKFEAIKGELLDELWKVAQ RELATGFYYQTPTENEQLFGARRKIPQYKFVGEVVAFDEETMTATIRQRNVILEGDAVEF YGPGFRHFETYIKDLHDADGNKIDRAPNPMELLTITVPQAVQAGDMIRARKEGLVNLYKS DGSSKTVRA >gi|304425971|gb|AEEM01000017.1| GENE 47 47712 - 48638 924 308 aa, chain - ## HITS:1 COG:SPy0590 KEGG:ns NR:ns ## COG: SPy0590 COG0826 # Protein_GI_number: 15674676 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Streptococcus pyogenes M1 GAS # 1 308 1 308 308 465 72.0 1e-131 MEKIIITATAESIEQVKELLDAGVDRIYVGEENYGLRLPHNFTYDELSEIAKLVHDAGKE LSIACNALLHQDMINAVRPYLDFLKDIKADYLVAGDAGVFHINKNEGYDFKMIYDVSVFV TSSRQVNFWGDHGASEVVLAREIPSVELFKMSENLRYPAEVLVYGATVIHHSKRPLLQNY YNFTHNDDEKTRERGLFLAEPSNKDSHYSIFEDKHGTHIFDTDDLDMMPKLTELTDHNFT HWKLDGIYCPGHDFVEIVKCFVKAKELIEADEFTQDQAFLLDEEIRKLHPKGRTLGTGFY EFDPEEVK >gi|304425971|gb|AEEM01000017.1| GENE 48 48864 - 48944 57 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIYGMISKYQRREDYANTIKATQRA >gi|304425971|gb|AEEM01000017.1| GENE 49 48910 - 49194 273 94 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1532 NR:ns ## KEGG: GALLO_1532 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 94 1 94 94 167 100.0 9e-41 MPTPLKQHKELEERHYQEDNAPKFQEFQEIDHRNAKLKELMFFARIALFGISTVVISFFL LVLNLAPIWAFLFASLISLAITSAVSSIIWSLRH >gi|304425971|gb|AEEM01000017.1| GENE 50 49513 - 49986 780 157 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1533 NR:ns ## KEGG: GALLO_1533 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 143 1 143 157 153 100.0 2e-36 MSKLLKNVIIGVASGAAAAYFLSTEKGKKFQKKAAKAYEAYKENPAEYHQKAKDKATEYT DLAVDTFNDYRQKFESGELTTDEFLDTVKEKGKAAADFASEKVSEFTSKVSEAVNEAEEA KEETKAEVDDIIIDYTQDEEAPATEKPETTTEEADEE >gi|304425971|gb|AEEM01000017.1| GENE 51 49983 - 50402 502 139 aa, chain - ## HITS:1 COG:SPy0587 KEGG:ns NR:ns ## COG: SPy0587 COG4768 # Protein_GI_number: 15674673 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain # Organism: Streptococcus pyogenes M1 GAS # 4 138 6 133 135 135 65.0 2e-32 MFEVALLIIAIAFAVLVGVFIPLGVKLYKTVDVVNETIDETKQTIKVLTSDVNVILHQTN EILAKANVLVEDVNGKVSTIDPLFVAVAELSETVSDLNTQARNITQKATQASSNVSKAGA AFAVGKVASKLFRKKGEEA >gi|304425971|gb|AEEM01000017.1| GENE 52 50426 - 51208 743 260 aa, chain - ## HITS:1 COG:SPy0585 KEGG:ns NR:ns ## COG: SPy0585 COG0682 # Protein_GI_number: 15674672 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 259 259 350 69.0 1e-96 MIDPVAIQLGPISIRWYAIFIVSGLLLAVYLAMKEAPRRKIIPDDILDFILIAFPLAIIG ARVYYVIFDWSYYANQPLSEIVAIWNGGLAIYGGLITGAIVLFVFSYYRAINPLDFLDIA APGVMIAQAIGRWGNFINQEAYGKIVDNLNYLPDFIKNQMYIDGSYRVPTFLYESLWNLL GFVIVMSLRHRPRFFKQGEIAFFYLIWYGCGRFVIEGMRTDSLMLLGIRVSQWLSALLVL IGVVLVIWRRKQKDVPYYQE >gi|304425971|gb|AEEM01000017.1| GENE 53 51208 - 52119 1047 303 aa, chain - ## HITS:1 COG:SPy0584 KEGG:ns NR:ns ## COG: SPy0584 COG1493 # Protein_GI_number: 15674671 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 301 7 307 310 511 84.0 1e-145 MLVDKVKLDVIYGDDDLLAKEITTSDISRPGLEMTGYFDYYSPERLQLLGMKEWSYLTKM SSHNRHQVLTEMIKPETPAIIVARNLAIPDEMLAAAKEKGIAVLQSHVPTSRLSGEMSWY LDSCLAERTSVHGVLMDIYGMGVLIQGDSGIGKSETGLELVKRGHRLVADDRVDVFAKDE ETLWGEPAEILRHLLEIRGVGIIDVMSLYGASAVKDSSQVQLAIYLENFESDKIFDRLGN SNEEIELSGVKIPRVRIPVKTGRNVSVVIEAAAMNYRAKQMGFDATKTFEDRLTQLISQN EED >gi|304425971|gb|AEEM01000017.1| GENE 54 52484 - 52762 374 92 aa, chain - ## HITS:1 COG:SPy0583 KEGG:ns NR:ns ## COG: SPy0583 COG1983 # Protein_GI_number: 15674670 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 92 1 90 90 109 66.0 1e-24 MKSALYKQRKNKLVCGVCAGIADKFGWDLPLTRVLTALLMYFYGFGIVIYILLAIFLPYK EDITRDHYGTGPRRRKDAEVVDEDDDNDGWFW >gi|304425971|gb|AEEM01000017.1| GENE 55 52868 - 53311 324 147 aa, chain - ## HITS:1 COG:SP0909 KEGG:ns NR:ns ## COG: SP0909 COG3091 # Protein_GI_number: 15900790 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 146 1 148 149 203 66.0 1e-52 MNLTNFIKTVSREDFGKEFRHTAVWNPRLRTTGGRFFPADGHLDFNPKIYEAFGVDVFRK IVRHELCHYHLYFEGKGYKHADADFKALLKAVDGLRYAPAMPQKTEKYLYRCQKCGQDYH RKRRVNTQKYRCGRCHGKLLEIKNQEI >gi|304425971|gb|AEEM01000017.1| GENE 56 53298 - 55430 176 710 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229202349|ref|ZP_04328894.1| SSU ribosomal protein S1P [Pedobacter heparinus DSM 2366] # 613 706 238 326 644 72 42 8e-12 MENENVTKIAQDLNIKESQIAKVLDLTSQGNTIPFIARYRKEMTGNLDEVQIKAIIDLDK SMTALADRKATVLAKIEEQGKLTAELKKAIENAEKLADVEELYLPYKEKRRTKATIAREA GLFPLARLILQNKPSLEVEAANFITEGFETADKALAGACEILIEAFSEDNKLRSWVYNEI WSYSSIISTVKDEAADDNKTFQIYYDFSEKVSKIQGYRILALNRGEKLGILKVGFEHNID KMVRFMGARFKNKNAYIDDVIAGTINKKIVPAMERRVHSELTESAEDGAIELFSENLRNL LLVSPLKGKMVLGFDPAFRTGAKLAVVDQTGKLMTTQVIYPVPPASQAKIEQSKKDLAEL IRTYGVEIIAIGNGTASRESEAFVAQVLKDFPDVSYVIVNESGASVYSASELARHEFPDL TVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLAENLDFVVDTVVNQVGV NINTASPALLAHVSGLNKTISENIVKYRDENGRIASREEIKEVPRLGAKAFEQAAGFLRI PGAENILDNTGVHPESYKAVERLLKELKITDLDDSAKTKLQSVSIETMAETINIGQETLK DIIADLLKPGRDLRDDFEAPVLRQDVLDISDLEIGQKLEGTVRNVVDFGAFVDIGLHDDG LIHISQMSKSFVKHPSQVVSVGDVVTVWVSKIDKERGKINLSLVDLRELN >gi|304425971|gb|AEEM01000017.1| GENE 57 55647 - 55781 270 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAITHKRQDDLESMFASFASIPKISSDPEKEKKVKDKKAEKATD >gi|304425971|gb|AEEM01000017.1| GENE 58 55787 - 56689 767 300 aa, chain + ## HITS:1 COG:SPy0576 KEGG:ns NR:ns ## COG: SPy0576 COG0701 # Protein_GI_number: 15674665 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 300 300 429 81.0 1e-120 MEIFDNLPASVLQWFAIFISIIIEALPFVLLGTILSGFIEVYVTPDLVQRFLPRNRFLRI LFGTFIGFVFPSCECGIVPIITRFLEKKVPSYTAVPFLATAPIINPIVLFATYSAFGNSW RFLGLRLLGAIIVAITLGIMLGFVVDENILKENAKPTHFHDYSGETWYRKIFLALAHAID EFFDTGRYLVFGTLVASGMQIYLPTRILTRIGGNALTAILVMMLLAFILSLCSEADAFIG ASLLSSFGTAPVLAFLLIGPMVDIKNLMMMVNSFKPRFIIQFITVSVGMIIIYCLLVGVI >gi|304425971|gb|AEEM01000017.1| GENE 59 56689 - 57501 980 270 aa, chain + ## HITS:1 COG:SPy0575 KEGG:ns NR:ns ## COG: SPy0575 COG3689 # Protein_GI_number: 15674664 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 270 1 271 271 412 77.0 1e-115 MIRFLILAGYFELTMYLQISGKLDQYINTHYAYLAYISMVLSFLLAVIQLVIWMKNLKLH SHLHGKIAKLTSPMILVIPVLVGLLVPTVTLDSTTVAAKGYNFPLAAGSAGTVSDDGTTV QYLKPDTSLYFTSSAYEKEMQKELKKYKGSGELKITTENYMEVMELIYLYPDEFMGREIT YTGFVYNEPGHEGYQFLFRFGIIHCIADSGVYGLLTTGNSTSYADNTWITATGTISLEYN QTLEQTLPVLHITEMKETSEPDNPYVYRVF >gi|304425971|gb|AEEM01000017.1| GENE 60 57568 - 58560 1176 330 aa, chain - ## HITS:1 COG:SMa0041 KEGG:ns NR:ns ## COG: SMa0041 COG0604 # Protein_GI_number: 16262472 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Sinorhizobium meliloti # 24 328 3 305 307 164 36.0 2e-40 MATLVRVHGQGIDQLQLDEVELRELASNEVRMTVKASRITGDQLNYIKGLRLPGEAIHEI SSLGYEAAGIVTAIGKSVDEKWLGKRVMPVGPYDFERYPSLGDDIIVPASRLVEIPDNVD FTAAASTWVPYLTAYPIYSQSNLKSGDYVLIIAGTSAVGQAAIDLARELGAIPIVTIRSR RKAAQLRQLKQLNHVIISDEEDLVTKISEITVGKGVQFIFDPIGGNTLPDLLQVASVGAK IYEYGILGGSECQFSAGLLLGKGLTLKGWTVSELVEDDLARSQAVTYICEKLALGDFNPT IAKTYPLNQIWEAYRKLEENDFLGTIIIEP >gi|304425971|gb|AEEM01000017.1| GENE 61 58667 - 59047 446 126 aa, chain + ## HITS:1 COG:lin0818 KEGG:ns NR:ns ## COG: lin0818 COG0789 # Protein_GI_number: 16799892 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 114 1 114 129 62 35.0 1e-10 MSYTIKETSKRTGLTLHTIRHYCDLDLIPSLQRDENNNRIFDEASIHWLYAIKFLRQSQM SLKEIRQFFEKYQYDPIKSSDRKKLLQKAIQVSDEKLQQTIQEHDRLKHELEAYLDNVDC EKNKEI >gi|304425971|gb|AEEM01000017.1| GENE 62 59085 - 59255 183 56 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1545 NR:ns ## KEGG: GALLO_1545 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 56 1 56 56 73 100.0 3e-12 MLEFVKAHLSTILLTSSTLVLTAIYAFEANWVIMLIWAFVSLINIGRLVYAYKHTS >gi|304425971|gb|AEEM01000017.1| GENE 63 59262 - 60692 868 476 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 164 476 11 324 336 338 53 5e-92 MGLFDRLFGNKKKEVEETVDSQSQEETLQEVVETSEQTEASSDTVKETVEVSEQAEIVND TVEETPEVQDVVNVNGEAEFVETETLVQSENSETVVENTANQTEEISEATAVTNEAETDQ HFSDVMADYYAKKAAAQEAIDRGETVTFEAVETRQETEPKEVVVQEATETEEEKYNRSLK KTRTGFSARLNAFLANFRRVDEEFFEELEEMLILSDVGVNVATQLTEDLRYEAKLENAKR ADDLKRVIIEKLVDIYEKDGVFNEKINFQDDLTVMLFVGVNGVGKTTSIGKLAYKYKNEG KKVMLVAADTFRAGAVAQLVEWGRRVGVPVVTGPEKADPASVVFDGMEKAVAENVDILLI DTAGRLQNKDNLMAELEKIGRIIKRVVPDAPHETLLALDASTGQNALSQAKEFSKITPLT GLILTKIDGTAKGGVVLAIRQELDIPVKFIGFGEKIDDIGEFDSEDFMRGLLEGIV >gi|304425971|gb|AEEM01000017.1| GENE 64 60741 - 61559 952 272 aa, chain - ## HITS:1 COG:SPy0568 KEGG:ns NR:ns ## COG: SPy0568 COG0561 # Protein_GI_number: 15674658 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 3 270 2 270 274 302 61.0 6e-82 MADIKLLALDLDGTLFNSQKVVSPENKKALRAARDKGIKVVITTGRPLKAISGLLEELDL ISDEDYIITFNGGLVQKTNGDILDKSELTRAQLKRLHSTLEPLALPFDVLSDGIVYSLAS QGNQSLYPQANPKLKFVELTSFDDIPENIIYNKVVSVTNPEFLDKQILQFPKELYNEFEI FKSRDIILEMMPKGVHKAAGLNQLIQHLNLLPENVMAMGDEENDLSMLKWAGLGVAMANG VAIAKETANAVTTRTNDESGVAEAVEKYILNA >gi|304425971|gb|AEEM01000017.1| GENE 65 61559 - 62356 994 265 aa, chain - ## HITS:1 COG:SPy0567 KEGG:ns NR:ns ## COG: SPy0567 COG0561 # Protein_GI_number: 15674657 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 264 1 265 265 245 44.0 8e-65 MVKLVATDMDGTFLTSNGYFDSKRLHDILEKFEKNNMLFVAASGRSLMALEKMFAEHADK MAFIAENGTLVKVGKDIVFESGLSKKQYLEVIDTLLESPYMLGYDFLLSGESGAYLHPKA SDDYLNFISNYYENVQRVADLAQVEDNILKVTANFSEDTVRQGEAWFNDRISYAQAVTTG FKSVDIVIRDVNKRTGLEALCQTFNMDKSEIVAFGDNLNDFEMLDFAGTAVATENARQEI KDISNEIIGHCDEESVMAYMEGLVE >gi|304425971|gb|AEEM01000017.1| GENE 66 62524 - 63336 940 270 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1549 NR:ns ## KEGG: GALLO_1549 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 270 1 270 270 427 96.0 1e-118 MKKRTSYFLVSGLVLLAVGGGVITLKHHSNHNHASTVSSQHHHAQKKLSKSTNSSTKTQN HVASKRADLLKAPTEKQVTEQLIKDGENLISTRQVSQQTSQFDFNALAQSDFSSLAGTWM DANGYTFEFSPQGIIDDKLILSALVYDENGEAISNVYTESGGGFILHYYAAGSQIPSWHF GITEADPSDYGRDRLFATQGSRFDYESTNQFVSNVFYKVSEQYSQNTQTESDTAGLSDSQ EESDDTLTTSSSDNQADGTTESQTETAVTN >gi|304425971|gb|AEEM01000017.1| GENE 67 63422 - 66961 4089 1179 aa, chain - ## HITS:1 COG:SPy0532 KEGG:ns NR:ns ## COG: SPy0532 COG1196 # Protein_GI_number: 15674632 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Streptococcus pyogenes M1 GAS # 1 1177 1 1177 1179 1178 62.0 0 MYLKEIEMQGFKSFADKTTIEFDKGVTAVVGPNGSGKSNITESLRWALGESSAKNLRGGK MPDVIFAGTENRKPLNYAQVIVTLDNSDGFIKDAKETIRVERHIYRNGDSEYLIDGRKVR LRDIHDLFMDTGLGRDSFSVISQGRVEEIFNSKPEERRAIFEEAAGVLKYKTRKKETQTK LNQTQDNLDRLDDIIYELETQVKPLERQAQVAKEFLGLEDERKQLHLNILVEDIQADKDR LAELNQSLTAIKADLTAYYEQRQQFERQNQNLKEKRHQLSEEISRRQEGLLDITRAISDL ERQMDLIALESSQKEEKKQAASSQLADLKENQARLTEELAQKEQQLSQLDAKLAQTTADI QALQAELDRFSTDPDQVIEKLREEFVGLMQKEADLSNKLTATIADIDNQKQLSESKSEEL AQTQETLAEVKLTAKEALENFEAAREKVKVLLDDYQTLHVQIVQAEKDYQLEQTKMFDQL DVIKSKEARKASLESILKNHSNFYAGVKSVLQASSQLGGIIGAVSEHLTFERDYQTALEI ALGGSSQHVIVEDEGAAKRSIAFLKKNRQGRATFLPLTTIKPRHLSQQNHSILASSQGFL GVASDLVSFDNRLENIFQNLLGVTAVFDTVDNANKAARALRYQVRIVTLDGTEIRPGGSF SGGANRQNNTTFIKPELDNLVAELQDLQTQQIKQEKRVQELQDALRANKETLASLKAQGE EARFAEQKAELEYQQLAERLNDINQLCERLQESETDGGSHDLESQKTTLEAELAEIAARK QALTVEIEQIKENKNTITQKVEALRQQVSQAKLAERELLSERKFESANKTRLEVSLAENK AEIAKCEDLLAYHASDNQTESLPTLQKQHDEAVTRKASEEESLVSLRFELEDCEANLEEL EEQVAKENQKNEELIRQQAQLEAQINQVSDRLRTFSHDLTEDYHLTLDEAKEASQPIDNM ESARQRLQELRRRIKALGPINLDAISQYDEVNERLTFLNAQKEDLVHSKNLLLDTINDMD DEVKTRFQVTFNAIRDSFKQTFTQMFGGGSADLSLTEGDLLTAGVEISVQPPGKKIQSLN LMSGGEKALSALALLFAIIRVKTIPFVILDEVEAALDEANVKRFGDYLNRFDKSSQFIVV THRKGTMAAADSIYGVTMQESGISRIVSVKLKEAENLVE >gi|304425971|gb|AEEM01000017.1| GENE 68 67092 - 67778 688 228 aa, chain - ## HITS:1 COG:SPy0531 KEGG:ns NR:ns ## COG: SPy0531 COG0571 # Protein_GI_number: 15674631 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 227 1 227 230 335 76.0 6e-92 MQALDTKLQRDFGIVFEDKTLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLLISQ YLFKKYPKKPEGDLSKMRSVIVREESLAGFSRYCGFDEFIKLGNGEEKSGGRNRDTILGD LFEAFLGALLMDQGVEAVNKFLNQVMIPQVEKGNFERVKDYKTTLQELLQGHGDVTIDYR VSNESGPAHAKVFEVTVYVNDEAKSQGIGRSKKLAEQDAAKNALALLQ >gi|304425971|gb|AEEM01000017.1| GENE 69 68297 - 69106 1011 269 aa, chain - ## HITS:1 COG:SPy0530 KEGG:ns NR:ns ## COG: SPy0530 COG1235 # Protein_GI_number: 15674630 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Streptococcus pyogenes M1 GAS # 1 269 1 269 269 449 81.0 1e-126 MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFIT HEHSDHIKGVGVLARRYNLDVYANEKTWQMIDERNMIGKLDLAQKHIFERGKTLTLGDID IESFGVSHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAGIIENADGYLIESNHDVEILR SGSYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN NLIQADFGVGYDMKVFDTSPDEATPLTEL >gi|304425971|gb|AEEM01000017.1| GENE 70 69107 - 70447 1434 446 aa, chain - ## HITS:1 COG:SPy0529 KEGG:ns NR:ns ## COG: SPy0529 COG5002 # Protein_GI_number: 15674629 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 444 5 448 450 646 77.0 0 MLQNLTYFEQAILFLLAFVAVYFVYLAIRDYRTSVNIRRLSGKVRELITGKYTEDIIIEK DRDLAELADQLNDLSTVFRLAQENLAQEKNRLASILSYMTDGVLATDRAGNITMINQTAQ QQLNLEREEALQMNIVDILGSDSTYSYHDLVSKTPEIVLNRRDETGEFITLRIRFALNRR DSGFISGLIAVLHDTTEQEKEDRERRLFVSNVSHELRTPLTSVKSYLEALDEGALKEDIA PSFIKVSLDETNRMIRMISDLLNLSRIDNQTVQLEVEMTNFTAFMTSILNRFDQIKSQHT ISGKQYEIVRDYPIKSIWLEIDPDKMTQVLDNILNNAIKYSPDGGKITVSMKTTETQLII SISDEGLGIPKKDLPLIFDRFYRVDKARSRAQGGSGLGLAIAKEIVKQHKGFIWAQSTYG KGSTFTIVLPYEKDSEIYDEWEDEEE >gi|304425971|gb|AEEM01000017.1| GENE 71 70452 - 71162 987 236 aa, chain - ## HITS:1 COG:SPy0528 KEGG:ns NR:ns ## COG: SPy0528 COG0745 # Protein_GI_number: 15674628 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 236 1 236 236 404 89.0 1e-113 MKKILIVDDEKPISDIIKFNLTKEGYETVTAFDGREAITKFEEEDPDLIILDLMLPELDG LEVAKEVRKTSHIPIIMLSAKDSEFDKVIGLEIGADDYVTKPFSNRELLARVKAHLRRTE NIETAVAEENASASNSEITIGDLKILPDAFVAQKRGEDIELTHREFELLHHLATHMGQVM TREYLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKSYE >gi|304425971|gb|AEEM01000017.1| GENE 72 71467 - 72231 576 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 243 1 242 245 226 46 4e-58 MALIEFKNVEKYYGEYHALRNINLEIEKGQVVVLLGPSGSGKSTLIRTMNALESIDTGSL KVNEHEVASATAKDLVQLRKEVGMVFQHFNLYPHKTVLENVTLAPIKVLGKSKQEAEAIA EQYLTYVNMWDRKDSFPGMLSGGQKQRVAIARGLAMQPELLLFDEPTSALDPETIGDVLA VMQNLAKEGMNMVVVTHEMGFAREVADRIIFMAEGEILVDTTDVQGFFDNPTEPRAKQFL SKVINHTSDTVSQK >gi|304425971|gb|AEEM01000017.1| GENE 73 72242 - 73054 1247 270 aa, chain + ## HITS:1 COG:SP0609 KEGG:ns NR:ns ## COG: SP0609 COG0834 # Protein_GI_number: 15900517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 17 266 4 250 254 234 54.0 9e-62 MKKKLGLAILASLSLILLTLFAGKTTFADSVSEQVKKIQDAGVLKVGVKQDVPNFGYYSA ETGKYEGMEVDLAKKIAKKLGVKVSFTAVTAQTREALLDNGQIDILIATYTITEERQASY AISDPYYYDEIGFLVNKSKGYDSIADLDGLTIGVAQGSTTKSAIEEYGEAHNLSFNFVQL GSYPELAISLYANRISAFSVDKSILTGYVSKKTEIIDEGFNTQEYGIAATKSNQSVIDYI NDLLADWKADGSLQKLYDKYDLTPATADDN >gi|304425971|gb|AEEM01000017.1| GENE 74 73071 - 73775 955 234 aa, chain + ## HITS:1 COG:SP0608 KEGG:ns NR:ns ## COG: SP0608 COG0765 # Protein_GI_number: 15900516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 13 234 4 225 225 278 63.0 9e-75 MFLLTEAASPFALSRWADFFANFGEFAKGFLYTLGMSICALILAFVLGVIFGAMSSSKNR VLKAIARVYVEVFQNTPLLVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEV IRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAII SGADIMFTAKAWAYETTNYVPAFAGAALLYFIMCFPLATWARRKEEENKKSYSL >gi|304425971|gb|AEEM01000017.1| GENE 75 73787 - 74434 778 215 aa, chain + ## HITS:1 COG:SP0607 KEGG:ns NR:ns ## COG: SP0607 COG0765 # Protein_GI_number: 15900515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 215 5 219 219 283 76.0 1e-76 MSVLTPTNISFILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPIFRWISSIYIEFVR NVPNLLWIFIIFLVFQMKSTPAGITAFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMT NFQIFIYIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGKSQILMGRYFEADQ VFTLYALIAAIYFVINFTISTISRRLAKKWEKAAE >gi|304425971|gb|AEEM01000017.1| GENE 76 74526 - 75134 818 202 aa, chain - ## HITS:1 COG:L114884 KEGG:ns NR:ns ## COG: L114884 COG0398 # Protein_GI_number: 15672877 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 8 187 10 187 201 119 37.0 3e-27 MVEAGTQRKNIQILTGIGFIISIGLLIFFKQHPTYFQVGGIFQSYLGQLGFFAPLIFMLL QVIQVVYPIIPGGMTSVIGYIAFGPIWGFIYNFTGIFAGSLLAFGLARRYGETFAKAFVS QETYDKYVGYLDRNDGKFYAKFLGAAFALPGFPDDFLCMVSGLSKMTWKKFITIFLITKP VTLYIYTVVAYKGLNYLLTLFH >gi|304425971|gb|AEEM01000017.1| GENE 77 75173 - 75289 109 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSKKSILYILLLLVLPLALIVYLLELFGLKIISWRR >gi|304425971|gb|AEEM01000017.1| GENE 78 75382 - 75684 331 100 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1560 NR:ns ## KEGG: GALLO_1560 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 71 1 71 75 113 100.0 2e-24 MTVSKKFKIGLMSVLAVILIILSIYAYNNLGYTLSSKEAYQIAYQNAGVASKDLLSKSFE KSRLGLKATYHITLKTETTDYSYTIDASTGSIMQRQFHEK >gi|304425971|gb|AEEM01000017.1| GENE 79 75927 - 77459 1609 510 aa, chain - ## HITS:1 COG:BS_resE_4 KEGG:ns NR:ns ## COG: BS_resE_4 COG0642 # Protein_GI_number: 16079368 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 303 510 48 268 269 144 40.0 5e-34 MSLLKRFGAMVSNSRKNNKKQLSHPKKILQKKRRNLRFKTTLFVQPLTIIIVSFAIILLV FNVLLKLFIAEQAFTAVQNQYDTLDTLYVGDTPETTAEGNIFETTYVIADDSFDIKYISA SMYDLSEKKISEKIIDYFSDNDDIEWFDDIDEDDADYSDYQNSLNYFKKVEIDGSAYMIK MQEYPGTLADSYVKQDNNDDSPTYYIFVFANVTPIEELEDYINFILLGLMVIVGIVASIS IFLTARKLDRNFGSLKSYILRVGNREKNLPTENFAYREFNEVGQTVERMNDMIDANQRSQ QLFFQNSSHELRTPLMSIQGYAEGIKEGVIDAKQAASVIVDESQKMTDLVDDILTLSKME SVQTQLQLEKLNITDLLYDVSWRLKAKADERGITFEHHFDEDYLEIEADEKLLERAFTNI LSNAVRYAKTQISISGKLIENQLQITISNDGEAISEQDQEHLFERFYKGKGGHFGIGLAI TKEIVERHKGTITVISNVQETSFIIYLPVK >gi|304425971|gb|AEEM01000017.1| GENE 80 77404 - 78096 691 230 aa, chain - ## HITS:1 COG:lin2062 KEGG:ns NR:ns ## COG: lin2062 COG0745 # Protein_GI_number: 16801128 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Listeria innocua # 3 226 6 233 238 159 39.0 4e-39 MAKVYVADDEKNIRELIASFLREQGLDVEIFETGDQLLLRFMEEEADVVILDVMMPGTNG VEIATMLRKRSDVPIILLTARDSDADFVKGFSAGADDYFTKPFSPLKLSLRVKAILARQP QSQEVAKGTSDVVTYEALTLSEKERTVTYDNQVLKLTNTEFELLKMLMNHAEEAVSRDEL LHHIWGYESSIETRVTDDTIKRLRKKLRGVDSHVLIETVWGYGFKLTKKQ >gi|304425971|gb|AEEM01000017.1| GENE 81 78202 - 79080 456 292 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1563 NR:ns ## KEGG: GALLO_1563 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 292 1 292 292 553 97.0 1e-156 MKIGDKAFFSFWEDSRAVTSANQAKEVLEKVMAIAQMPLELTGNVSQTRELINQFSDNLA PDHVFWQEFAEVVQLAFPAESMAADNLLAHQIHQFRYVISAYQAQWVREYFPAQNDRLSL LTYLKGKKRRRFWRKQFDFDLTESSRLHNKAPKQPILGFSLPVNLKIVMGFHTEFILDSQ GRFANEIDPQGTNHNGIINGASFNYASQNDKRHYELDIAPIKPHDPAFRKQILANQGNRF SAPLLIKKRQHEQWEHSYFNKKGHYAQAGKSAYQQVKILRRSFQKELRKLKK >gi|304425971|gb|AEEM01000017.1| GENE 82 79095 - 79427 202 110 aa, chain - ## HITS:1 COG:no KEGG:smi_0611 NR:ns ## KEGG: smi_0611 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 110 1 110 116 141 67.0 6e-33 MDYKKYKLIYSQRVIDTLDDIYHYIANEIGSTINAKKKIASIRKDLQRLEFFPEGGFDAD EKFGKCLDPKYKTRGLTLSKDYIALYNILENEVRIAYLLPTRSDYMDLFR >gi|304425971|gb|AEEM01000017.1| GENE 83 79417 - 79701 360 94 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALAYDKSYNLRTYQKIYNQAEKVFKENNLNTAQALNLFLKNVAETGQLNLKTEEELKRE KLFKNLQAEIQQSYAEFDEGKFYTDEDLVERYGL >gi|304425971|gb|AEEM01000017.1| GENE 84 79849 - 79941 58 30 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVQNALKLSIYIFTLLYLTEELFYTVIFGK >gi|304425971|gb|AEEM01000017.1| GENE 85 79977 - 80495 524 172 aa, chain + ## HITS:1 COG:lin0482 KEGG:ns NR:ns ## COG: lin0482 COG1309 # Protein_GI_number: 16799557 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 4 168 6 171 186 89 30.0 4e-18 MNTLTEQAFAKALKEIMQEKSFDKVTVTELVQRLNVNRQTFYYHYNDLYDLLEQIYIADG EQMIGDNRTDDSWEKGMLAIFHYIQENKAFVCNTYYSVNRNYLEHFLYDRAYELIKPVLK EKELELTQEELDFRSHFYKYGLVGFILDWIDSGLQENPQDLVQHIYQLLEKL >gi|304425971|gb|AEEM01000017.1| GENE 86 80609 - 82378 2056 589 aa, chain + ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 1 589 1 591 591 753 61.0 0 MYYSNGNYEAFARPKKPENVENKSAYIVGSGLAALSTAVFLIRDAQMPGEHIHILEELSL PGGSMDGIKNDRLGYIIRGGREMEPHFEVLWDLFRSIPSLENPENSILDEFYWLNKEDPC YAKTRVIHNRGKAIPDDGQLTLSETAIKEIIDLVLTPEKQLEDVQIDQVFGEEFFASNFW LYWSTMFAFEPWSSAMEMRRYLMRFVQHVDALKDLSSLRFTKFNQYESLILPMIHYLQEH GVDFSYNTTVTNILINRTGNDKVATKIEFTKDKQAQEIFLTKDDLVFVTNGSITESSTYG DNDHPAPTTHELGASWELWKKLAAQDKDFGHPEKFCENIPDSNWTISATITFKDKRIAPY IENINHKDPYSGSIVTSGPTSIKDSNWLLGYSISRQPHFKAQKENELVVWLYALYTDRKG NYIEKRPDECSGKELCQEWLYHMGVPETDIKEIAEAASTIPCHMPYITTYFMPRGLKDRP LVVPEHSKNLAFIGNYAETPKDTVFTTEYSVRTAMEAVYTLLNVDRGVPEVFASAFDIRM MLNALYYLNDQKSLTEIDFPWAKKAVLKEALKKIHGTYIEELLKEYHLL >gi|304425971|gb|AEEM01000017.1| GENE 87 82508 - 83326 789 272 aa, chain - ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 37 269 4 245 251 182 40.0 9e-46 MIKKIKNNFLTVLLVGILLVGLSLLLYPTISDYWNSFHQSEAVAGYVQDVDDMSDEKKAD MLVAAQAYNQTLRQGGTPDLKLSDSERKVYNQTLDVTGTGIMAYVEIPKLKTILPIYHGT DDSTLQVAIGHIPGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDRLVKGDTFMIQVLDET LTYEVDQILTVTPDDMAALAIDPEQDYVTLVTCTPYGVNSHRLLVRGHRIANKKGVTRIA PEATRVNPLIVALIIAIILLIVIGIYRKLRHR >gi|304425971|gb|AEEM01000017.1| GENE 88 83372 - 83452 91 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQDIALGNESSTQFYPILTPIGSEEK >gi|304425971|gb|AEEM01000017.1| GENE 89 83466 - 84908 1748 480 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2178 NR:ns ## KEGG: GALLO_2178 # Name: not_defined # Def: putative peptidoglycan linked protein (fimbrial structural unit) (LPXTG motif) # Organism: S.gallolyticus # Pathway: not_defined # 1 477 1 477 480 437 59.0 1e-121 MKKLKLIFATLLSVLFAFTGGGKAFADDSTYTLTINGTTIGHTYEVYQVFNVQVADDGTT LSDVSWGSGVTPFSYAGISSMNPKEIADSLGSEDNSAVAKSFAASVAANLRTATTSVTAS TTSVAIPGLTAGYYLVKDANEDSNFFLVAVTKDITATVKNGTPTVEKKVKDTNDTTGETS DWQDSADYDINDSVPFQLTATLPSNLDDYTEYYLEFSDTLSSGLTYNKDAKVYLDNDGAR TDVTSAFTIADDGSSFKIDNLKSLDGVTSSTKVIVEYTATLNENAVIGDAGNPNTVKLIY SNNPGSTDKGETPEDTVIVFTYKFIVNKVDQDGKALAGAGFTLYKKVNDDWKQIGDEITG VTTFEFKGIDDGEYKLVETTTPTGYNSIDDIQFTVEARHTEESDSPQFVRIAVTIHGDGS LTSNEAVNAHGWFKFDVINKKGTVLPSTGGMGTTLLYVVGTILVLAAGALLVTKKHVSVN >gi|304425971|gb|AEEM01000017.1| GENE 90 84994 - 86952 1828 652 aa, chain - ## HITS:1 COG:L83620 KEGG:ns NR:ns ## COG: L83620 COG4932 # Protein_GI_number: 15672666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Lactococcus lactis # 252 425 143 330 336 68 30.0 3e-11 MRKFIKILFVLLITLLALTGIKAKAETYLGYADSSSEPVKCTLVENNEEAVAYYVTYTFL PKEKNQGGSSFTPTMDVNPNWSDASLAERTAIALYWRCPFIKMDRAELYDAVMKVLYNGY PNNYSGIQAKYNLSNDEFRYITQYAILHFTSEGFDPNGTGDATALGFTDQSWIDTWESNS KYKAAYRELINTSNLTYSPYFRLDIYGSRDGIAGACTLLVAKTAYTKVHVTKVWDDNDNQ DGVRPDKVVFQLLANGVEVAGQQLELDAENNWSSAFPGTNQEGRLDKYDSNGTPIEYTVK EVTEVSGYGAPVYQAGVSGDYGDHIEYTVTNARKAETTEISGAATWDDKDNQDGKRPTSI TVNLFADGVKVDSKEVTADNDWKYIFTGLAKYKDSQEIKYSVTAEAVKDYETKVSGTDIT NTHIPETIEISGTKTWDDNDDQDGKRPTSITVNLLVDGVKVDSKKVTADDDWKYSFKELA KYKAGQEIKYSITEEAVEDYEAKVSGTDITNTHTPETTDITVTKVWDDKDDKEKKRPDSI KVTLKANDKDIQTVTITAKDDWKCELTELPTYEKGKKIKYSLSEKDVPNYKNVSIEEDES GNFEITNQIKKKYQFPSVGGSGSISYYVIGLTAVLFALIFMVVRFYKNQVKL >gi|304425971|gb|AEEM01000017.1| GENE 91 88049 - 91522 3536 1157 aa, chain - ## HITS:1 COG:L83620 KEGG:ns NR:ns ## COG: L83620 COG4932 # Protein_GI_number: 15672666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Lactococcus lactis # 907 992 244 330 336 73 44.0 2e-12 MRKFIRIFLVLLTTLLTLTGISAKAEEDVYYTGYTGYSDGSKMSYDFVHVFSYGIEEDGG SIRAYCFNHIKSRPSSKREEGEAKYRKIADVDYVRLKENCNSDMEGQELYDAIMKVICNG YPNNCSSIKEKYRLKDGDFCAITQKAIWHFTDGVDSDGTGDYIALGALHSKKAWDESSVK GAYLELIDVANLSYPAGAKLNLYLYDHGDTSGDVQNLITTDVGYTNLSVEKVWDDNDDQD GLRPTSINVQLLANGVEVEGQKIELSRSSNSNWQGVFRGLSLYDSDGNPIEYSVKEVERY SGDLDGYQSTVTNTKSDSGYSYTITNTHVPETTEISGTKTWDDKDNQDGKRPNSITVKLL ADFRYDDGEEFAPQEEIASKEVTADTDWKYSFKDLPKYRDGVEISYSIVEEPVSDYETTI SGTDITNTHVPETTEISGTKTWDDNDDQDGKRPTAITVNLLADGVKVDSKKVTAADDWKY EFKDLPKYKAGQEIKYSVTEEAVKDYETKVSGTDITNIHTPETTEISGTKTWDDNDDQDG KRPDSVTVQLYKSVNGSTPVAVEGKTLTITADDKTDDNTWIASFTNLPQFEKGQEITYSV QETDVADGYTASVSGQMITNSHTPDTVVISGTKVWDDNNNQDGKRTATVTVQILKGETVV DEIEVSESDDWSFTSKELPKYENGQEIAYTVKEIAVENYTTKAIEQGEDGKYTIVNEHTP EKITLSGEKIWNDANNQDGIRPESITVHLLANGEETGQTATASEATGWKYEFADMDRYKD GQEIVYSVVEDEVDDYTSQPTGMNVTNSHEPETTSVSGEKTWSDNNDQDGLRPDSIIINL LANGEVVASQTVTADNDWNYAFTDLPKYDNGNEIVYTVDEATTPDGYTSSVDGTTITNTH TPETTEVSGTKTWADNDDQDGKRPASITVNLLANGTVVDTKTVTADDNWSYSFTDLPKYD NGNEITYTVTEDTVADYTTTYDGYNITNSYTPGETSITVTKVWDDNNDQDGIRPDAIQVQ LYANGEKSGDVITLTVADNWTYTWTGLAEKANKKTITYTVEEVSAVDGYTATVGEVDNGN VTITNTHTPTTPETPSSDEPTTPSQSNKKSDKEQDKNIIAALLPSTGSRSGLGLTILGLV LVIALLAGLVYHKVKKA >gi|304425971|gb|AEEM01000017.1| GENE 92 92061 - 92675 452 204 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1572 NR:ns ## KEGG: GALLO_1572 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 204 8 213 213 235 64.0 7e-61 MKKKIISLVILCVLALSAGFYYYIHQPKNIFDEIYQETKKTYRSNNIFNQLDDVDVHKYQ EYSSDSKFYPNITYHDEVFSEDYSNVHLTFHFTQDTKTVFISLEKEITTSIRLWIFGNYS LNENLFQKDVQIILENGDSNNYVEDESKVKSYLQDYGITAADLDNYYNEIVNQKVLTDWC SIYDSQFSPEDYGNVTVKTQWENW >gi|304425971|gb|AEEM01000017.1| GENE 93 92681 - 93292 283 203 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1571 NR:ns ## KEGG: GALLO_1571 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 203 8 210 210 339 96.0 3e-92 MKKKIISLVILCVLILSAGLYYYIHQPKNIFDEIYWEMKTNYLGTNIFYQIKDAEIKNYK IYDKDMNETNKFSPSISYPDYYLNDRNPNLRITFNLYQEKGFNIYFEKYIDSKVSINFSV HYITMEKTLNKKISITNSNNYIEDESKVKSYLQDYGITAADLDSYYDAIVNQKVLTDWCS IYDSQFSPEDYGNVTVKTQWENW >gi|304425971|gb|AEEM01000017.1| GENE 94 93297 - 93914 527 205 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1572 NR:ns ## KEGG: GALLO_1572 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 205 8 213 213 266 72.0 2e-70 MKKKIISLVVLCVLALSAGVYYYIHQPKNIFDEIYQETKKTYRSNNILGQIEDFEIRGSW PTDSDSYKYTPFGTYEIKEGENNYSNIRIGFNFKRTQKTVSVSFQKELDSKVSLSLWSMY SAKKQTLTKTVEILIKENDSNNYIDDESKVKSYLQDYGITAADLESYYNEIVNQKVLTDW CSIYDSQFSPEDYGDVTVKTQWGNW >gi|304425971|gb|AEEM01000017.1| GENE 95 93920 - 94537 385 205 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1572 NR:ns ## KEGG: GALLO_1572 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 205 8 213 213 263 69.0 3e-69 MKKKIISLVILCVLALSAGIYYYIHQPKNIFDEIYQETKKTYRSNNILGQIEDFEIRGSW PSDNKSNRYMPFGKYDSDSLPEDYSEIKVSFNFQNDTQISSITFEKRIASKVRVRVWSKY SYTDSVLTKRVKIALEDGDSNNYIEDESKVKSYLQDYGITAADLDNYYNEIVNQKILTDW CSIYDSKFSPGDYGDVTVKTQWENW >gi|304425971|gb|AEEM01000017.1| GENE 96 94542 - 96191 1674 549 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1574 NR:ns ## KEGG: GALLO_1574 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 549 1 553 553 922 92.0 0 MGLNMTLEQSQAQAESVASVSQAQIEGYQALQQAIQQFADDTESLTGKAYEAAKAYYRAV LLPLAQGGELYAEMLAKASAKLPENYQESVDTKSWSEEQLLEYIRQEEDLINQLDEINQS LSRLELPTTQKRQMQQGTVDLIRGHHANKRVYETILEDLRAYSTDSVRLFDELDDIALQL STGLAQAETSWNATDKSFTIPSDLSWATYLSAYSATNDLELSREERAFVNTMMTEYGFDV ETAKQLLTIKRGIDSQFSYFAGYTSQERDYIFLRLIGAVSYDGVKWDETAGYLSNYFYTE TISDFFTGDTQKVPMSLLEIFQVLGLSEQEAKELNYNLRLQHEMAGGTLDDTTTLQENTS KEYATYKDTYKSVYGTTKGFDDFWDEHLKAYSNNGAGNADFTHQSITMATHLNPSGLQLS DFYGGREHVKALAGWEGDTTYNANDEKPSIGEDDYKADLDAVNIVGRMAKGQSYERAMSG YYSDVTKDETVREKEFLKNEDWDKVKGTIYASLVPIDIRRKGEEATSNYIFENYEDVSKF LSRLEAVGE >gi|304425971|gb|AEEM01000017.1| GENE 97 96209 - 96550 400 113 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1575 NR:ns ## KEGG: GALLO_1575 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 113 1 113 113 184 99.0 6e-46 MTEKWEALNRKERQLSYQLEDIENTRFRAEQVLGDFENYDYGGRTISLNNAWDAAYGSKY ATQLGEQGEQLHELRNQVFETFIDGVDELKHQARQIEDEMEAIYIAKRKESLK >gi|304425971|gb|AEEM01000017.1| GENE 98 96543 - 96824 274 93 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1576 NR:ns ## KEGG: GALLO_1576 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 93 1 93 93 128 97.0 8e-29 MTTIRSDREVAQTYASQLANACQNLTAVSEVTKDTVTELEGNTRHHAVIDQAKSFLAQIT AAVETASDHLHSVASDFEAVDQAGAESFEGKHD >gi|304425971|gb|AEEM01000017.1| GENE 99 97089 - 99488 2078 799 aa, chain - ## HITS:1 COG:CAP0119 KEGG:ns NR:ns ## COG: CAP0119 COG5520 # Protein_GI_number: 15004822 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: O-Glycosyl hydrolase # Organism: Clostridium acetobutylicum # 229 374 440 584 586 112 45.0 4e-24 MKKTKRVLSLMFSILLLVAMTLTGVSLLKADTNTQTTTSWNFEDSNFKDLGTLSDTRTVD GLTLVATDSLPMQVKVKNVTLGDKSFTYALALNGKGDQNGRAVKVPVAANDMVKVTLQSS SSTEARTLILADSAGNQLSTMTADVTANTQSYTYTGNEDAIWLYSQNSGIDLFEIEVEST ETSTGDTATPDSSADETVTIDTNNLSDNQLSSDQLAESKVASNAAQNYLADGWYYLKNIN SQKYLDVSGKRDADGSNVIQYSGNGGDNQKWYVTNLGNNYITLRSGLSGGRMLDVANGGR TDGTNIQIYSANGADAQIFQVVPTKTANTYCLLTKCSGGTQAVDVNGWSKEDNGDIKTWT YNGYECQQFKFESTTANSGNSSSGGSTNTSDGTVVTNYKDLLSAVSKAEKAGGGKVYVKG TSIACSGQIALSKTNANVQIIGVKNSDGTYPRLDFSTFMNQYIGKASSDTAVGVRITGSK YTLQNLIVEHAPDNGIQIKGSNAGNNKVSNCITRYNNDAGLQVTLGAYKNTIEYVCSYRN CDVYTRGGNADGFAPKLGAGSGNTFSYCYAWDNSDDGWDSFDKVGNVTPDISYTYCAVWN NGNPNVFTGKYDFDNGKALDENLLLVQLIKAKDSSFASKYAKRQFSLPTGNFIQTDAGTI SLSAWTGSSFDGNPNGFKLGSAYSKSSVTRNLSYCLAFDESKKGFDNNNSSVTGYFNHCI AFDNGYNYYIQPLTIKGWSSVQGFSGKSGDKLPSGRSVSTPSSSSQSSIRKSVESTKNSI IASCQANKIPGKVTFNVFN Prediction of potential genes in microbial genomes Time: Sun May 29 12:47:46 2011 Seq name: gi|304425798|gb|AEEM01000018.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00028, whole genome shotgun sequence Length of sequence - 165098 bp Number of predicted genes - 169, with homology - 167 Number of transcription units - 94, operones - 47 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 58 - 1878 1648 ## GALLO_1578 putative pectate lyase related protein, polysaccharide lyase family - Prom 1901 - 1960 8.5 - Term 2204 - 2244 3.3 2 2 Tu 1 . - CDS 2278 - 4224 2671 ## COG0441 Threonyl-tRNA synthetase - Prom 4244 - 4303 4.0 - Term 4317 - 4351 5.1 3 3 Op 1 25/0.000 - CDS 4574 - 5908 1650 ## COG0438 Glycosyltransferase 4 3 Op 2 3/0.160 - CDS 5910 - 6908 964 ## COG0438 Glycosyltransferase - Prom 6931 - 6990 2.3 - Term 6939 - 6987 5.6 5 3 Op 3 . - CDS 7004 - 8005 1324 ## COG1609 Transcriptional regulators - Prom 8041 - 8100 7.1 + Prom 8256 - 8315 6.2 6 4 Tu 1 . + CDS 8335 - 9420 1282 ## COG0006 Xaa-Pro aminopeptidase + Term 9424 - 9466 5.2 - Term 9416 - 9450 3.1 7 5 Tu 1 . - CDS 9455 - 9781 461 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 9817 - 9876 5.8 + Prom 9702 - 9761 6.2 8 6 Op 1 . + CDS 9954 - 10208 195 ## GALLO_1585 hypothetical protein 9 6 Op 2 . + CDS 10223 - 10528 296 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding + Term 10549 - 10585 5.4 - Term 10537 - 10573 5.4 10 7 Op 1 . - CDS 10580 - 12349 1891 ## GALLO_1586 hypothetical secreted protein - Term 12360 - 12395 3.4 11 7 Op 2 . - CDS 12406 - 14316 2334 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 12 7 Op 3 . - CDS 14375 - 15604 1070 ## GALLO_1589 hypothetical protein 13 7 Op 4 . - CDS 15609 - 16778 773 ## GALLO_1590 hypothetical protein 14 7 Op 5 . - CDS 16790 - 17830 1113 ## COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold - Prom 17861 - 17920 8.0 - Term 17925 - 17963 6.1 15 8 Tu 1 . - CDS 18012 - 18761 613 ## COG3394 Uncharacterized protein conserved in bacteria - Prom 18894 - 18953 5.3 - Term 18803 - 18873 7.2 16 9 Op 1 . - CDS 18967 - 20544 1821 ## GALLO_1586 hypothetical secreted protein 17 9 Op 2 . - CDS 20583 - 22034 1758 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 18 9 Op 3 . - CDS 22049 - 23461 1237 ## GALLO_1609 putative tannase - Prom 23692 - 23751 9.1 + Prom 23691 - 23750 9.8 19 10 Tu 1 . + CDS 23812 - 24552 683 ## GALLO_1610 putative transcriptional regulator, RpiR family + Term 24562 - 24612 8.1 - Term 24537 - 24581 2.2 20 11 Op 1 . - CDS 24667 - 25074 338 ## GALLO_1611 hypothetical protein 21 11 Op 2 6/0.080 - CDS 25075 - 25644 607 ## COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase - Prom 25703 - 25762 2.6 - Term 25850 - 25887 -0.0 22 12 Op 1 . - CDS 25960 - 27435 1989 ## COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases - Prom 27456 - 27515 4.4 23 12 Op 2 . - CDS 27524 - 28408 793 ## COG0583 Transcriptional regulator - Prom 28513 - 28572 6.7 + Prom 28441 - 28500 10.2 24 13 Tu 1 . + CDS 28601 - 29329 865 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 29369 - 29420 11.6 + Prom 29598 - 29657 7.5 25 14 Tu 1 . + CDS 29684 - 30112 617 ## COG1846 Transcriptional regulators + Term 30113 - 30145 -0.9 + Prom 30115 - 30174 13.6 26 15 Op 1 . + CDS 30231 - 30734 760 ## GALLO_1617 hypothetical protein 27 15 Op 2 . + CDS 30783 - 31460 803 ## COG0778 Nitroreductase + Term 31563 - 31616 11.0 - Term 31556 - 31598 2.0 28 16 Op 1 8/0.040 - CDS 31660 - 33132 1817 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 29 16 Op 2 . - CDS 33132 - 35003 2253 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 35052 - 35111 11.9 + Prom 35048 - 35107 12.1 30 17 Tu 1 . + CDS 35160 - 35909 541 ## COG1737 Transcriptional regulators + Term 35911 - 35950 8.0 - Term 35891 - 35944 13.2 31 18 Op 1 10/0.040 - CDS 35984 - 36451 793 ## COG0691 tmRNA-binding protein 32 18 Op 2 6/0.080 - CDS 36498 - 38831 1369 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Prom 38951 - 39010 6.2 - Term 38956 - 38988 1.1 33 19 Tu 1 . - CDS 39057 - 39293 198 ## COG1314 Preprotein translocase subunit SecG - Prom 39316 - 39375 2.6 34 20 Op 1 . - CDS 39421 - 39567 228 ## PROTEIN SUPPORTED gi|222152690|ref|YP_002561866.1| 50S ribosomal protein L33 2 35 20 Op 2 . - CDS 39564 - 40739 976 ## COG0477 Permeases of the major facilitator superfamily - Prom 40800 - 40859 6.9 36 21 Op 1 4/0.080 - CDS 40891 - 41505 481 ## COG0237 Dephospho-CoA kinase 37 21 Op 2 . - CDS 41481 - 42371 646 ## COG0266 Formamidopyrimidine-DNA glycosylase - Prom 42443 - 42502 4.9 - Term 42453 - 42502 3.3 38 22 Tu 1 . - CDS 42750 - 42839 60 ## - Prom 42972 - 43031 7.6 - Term 42976 - 43016 7.1 39 23 Op 1 3/0.160 - CDS 43055 - 43951 1053 ## COG1159 GTPase 40 23 Op 2 11/0.040 - CDS 44010 - 44417 405 ## COG0818 Diacylglycerol kinase 41 23 Op 3 . - CDS 44398 - 44895 691 ## COG0319 Predicted metal-dependent hydrolase - Prom 44923 - 44982 5.9 - Term 45054 - 45091 4.0 42 24 Tu 1 . - CDS 45138 - 47369 2885 ## COG0366 Glycosidases - Prom 47614 - 47673 9.4 - Term 47676 - 47706 1.1 43 25 Op 1 . - CDS 47709 - 48263 275 ## PROTEIN SUPPORTED gi|116511598|ref|YP_808814.1| acetyltransferase 44 25 Op 2 . - CDS 48260 - 48490 362 ## GALLO_1634 hypothetical protein - Prom 48616 - 48675 10.3 - Term 48644 - 48680 1.5 45 26 Op 1 . - CDS 48681 - 49751 1319 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 49780 - 49839 6.8 46 26 Op 2 . - CDS 49841 - 51010 856 ## GALLO_1636 putative permease, major facilitator superfamily - Prom 51212 - 51271 6.6 - Term 51303 - 51329 0.3 47 27 Op 1 2/0.200 - CDS 51330 - 51545 303 ## COG4479 Uncharacterized protein conserved in bacteria 48 27 Op 2 2/0.200 - CDS 51542 - 52051 622 ## COG0225 Peptide methionine sulfoxide reductase - Prom 52073 - 52132 7.5 - Term 52078 - 52116 -0.4 49 28 Tu 1 2/0.200 - CDS 52338 - 53204 483 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains - Term 53213 - 53245 4.7 50 29 Op 1 33/0.000 - CDS 53261 - 53818 1012 ## COG0233 Ribosome recycling factor 51 29 Op 2 1/0.560 - CDS 53872 - 54609 1157 ## COG0528 Uridylate kinase - Prom 54632 - 54691 8.1 - Term 54761 - 54801 8.5 52 30 Op 1 55/0.000 - CDS 54817 - 55506 1114 ## PROTEIN SUPPORTED gi|225868099|ref|YP_002744047.1| 50S ribosomal protein L1 - Prom 55599 - 55658 4.2 53 30 Op 2 . - CDS 55661 - 56086 688 ## PROTEIN SUPPORTED gi|15674579|ref|NP_268753.1| 50S ribosomal protein L11 - Prom 56160 - 56219 8.2 + Prom 56207 - 56266 5.2 54 31 Tu 1 . + CDS 56436 - 56789 267 ## GALLO_1644 hypothetical protein - Term 56780 - 56814 1.1 55 32 Tu 1 . - CDS 56822 - 59233 2843 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 59309 - 59368 6.2 + Prom 59239 - 59298 6.8 56 33 Op 1 . + CDS 59421 - 60257 747 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 60274 - 60331 6.6 + Prom 60282 - 60341 5.9 57 33 Op 2 . + CDS 60410 - 61060 447 ## COG1321 Mn-dependent transcriptional regulator + Term 61065 - 61123 11.9 - Term 61059 - 61099 7.0 58 34 Op 1 . - CDS 61105 - 61797 827 ## COG0775 Nucleoside phosphorylase 59 34 Op 2 . - CDS 61881 - 62210 448 ## GALLO_1720 hypothetical protein 60 34 Op 3 3/0.160 - CDS 62216 - 62764 673 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 62858 - 62917 6.2 61 35 Tu 1 . - CDS 62970 - 64352 1789 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) - Prom 64422 - 64481 6.3 62 36 Op 1 . - CDS 64496 - 65458 1133 ## COG0673 Predicted dehydrogenases and related proteins 63 36 Op 2 . - CDS 65494 - 65937 483 ## COG4405 Uncharacterized protein conserved in bacteria - Prom 66011 - 66070 1.8 - Term 66093 - 66129 0.2 64 37 Op 1 . - CDS 66136 - 66834 215 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 65 37 Op 2 . - CDS 66827 - 67063 253 ## GALLO_1726 hypothetical protein - Term 67089 - 67125 2.2 66 38 Op 1 . - CDS 67137 - 67961 421 ## GALLO_1727 hypothetical protein 67 38 Op 2 . - CDS 67945 - 68283 410 ## COG1695 Predicted transcriptional regulators - Prom 68333 - 68392 13.7 - Term 68376 - 68414 5.6 68 39 Tu 1 . - CDS 68420 - 69652 1376 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 69673 - 69732 6.6 - Term 69781 - 69821 3.2 69 40 Tu 1 . - CDS 69847 - 71850 2520 ## COG0143 Methionyl-tRNA synthetase - Prom 71896 - 71955 5.9 70 41 Tu 1 . - CDS 71969 - 73282 1280 ## COG0534 Na+-driven multidrug efflux pump - Prom 73358 - 73417 5.5 + Prom 73307 - 73366 6.1 71 42 Tu 1 . + CDS 73409 - 73957 333 ## COG1309 Transcriptional regulator + Term 74120 - 74165 -0.9 + Prom 74048 - 74107 6.9 72 43 Tu 1 . + CDS 74171 - 74998 869 ## COG0708 Exonuclease III + Term 75010 - 75047 6.1 - Term 74998 - 75034 3.4 73 44 Tu 1 . - CDS 75063 - 76445 1288 ## COG0477 Permeases of the major facilitator superfamily - Prom 76549 - 76608 5.4 + Prom 76533 - 76592 7.1 74 45 Tu 1 . + CDS 76613 - 77158 694 ## GALLO_1735 putative transcriptional regulator, TetR family + Prom 77240 - 77299 5.3 75 46 Tu 1 . + CDS 77423 - 77995 319 ## GALLO_1736 hypothetical protein - Term 77978 - 78029 6.1 76 47 Op 1 . - CDS 78033 - 78380 346 ## GALLO_1737 hypothetical protein 77 47 Op 2 . - CDS 78389 - 79225 1007 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 78 47 Op 3 . - CDS 79238 - 80059 1355 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 80082 - 80141 8.2 + Prom 80054 - 80113 7.9 79 48 Tu 1 . + CDS 80164 - 81036 546 ## COG0583 Transcriptional regulator + Term 81138 - 81189 6.2 - Term 81133 - 81166 2.3 80 49 Op 1 2/0.200 - CDS 81173 - 81529 460 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 81 49 Op 2 . - CDS 81542 - 82027 575 ## COG0350 Methylated DNA-protein cysteine methyltransferase 82 49 Op 3 . - CDS 82086 - 82313 259 ## GALLO_1743 hypothetical protein - Prom 82346 - 82405 7.5 - Term 82360 - 82402 6.2 83 50 Op 1 . - CDS 82414 - 83592 1635 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 84 50 Op 2 . - CDS 83638 - 84186 687 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 85 50 Op 3 . - CDS 84257 - 85348 1278 ## COG1932 Phosphoserine aminotransferase - Prom 85368 - 85427 8.9 + Prom 85315 - 85374 12.0 86 51 Tu 1 . + CDS 85484 - 86122 896 ## COG3142 Uncharacterized protein involved in copper resistance + Term 86143 - 86181 2.0 - Term 86167 - 86211 9.3 87 52 Op 1 24/0.000 - CDS 86254 - 86595 503 ## COG0347 Nitrogen regulatory protein PII 88 52 Op 2 . - CDS 86652 - 87887 1436 ## COG0004 Ammonia permease - Prom 87972 - 88031 7.5 - Term 88217 - 88268 8.5 89 53 Op 1 2/0.200 - CDS 88287 - 89153 853 ## COG0313 Predicted methyltransferases 90 53 Op 2 5/0.080 - CDS 89160 - 89480 382 ## COG4467 Uncharacterized protein conserved in bacteria 91 53 Op 3 7/0.040 - CDS 89473 - 90273 623 ## COG1774 Uncharacterized homolog of PSP1 92 53 Op 4 22/0.000 - CDS 90270 - 91145 600 ## COG0470 ATPase involved in DNA replication 93 53 Op 5 . - CDS 91156 - 91791 778 ## COG0125 Thymidylate kinase - Prom 91816 - 91875 5.6 - Term 91918 - 91956 5.6 94 54 Tu 1 . - CDS 91978 - 92637 987 ## COG0517 FOG: CBS domain - Prom 92661 - 92720 8.3 - Term 92742 - 92778 5.0 95 55 Op 1 18/0.000 - CDS 92811 - 93515 289 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 96 55 Op 2 19/0.000 - CDS 93521 - 94285 287 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 97 55 Op 3 24/0.000 - CDS 94285 - 95238 1486 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 98 55 Op 4 20/0.000 - CDS 95242 - 96126 957 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 99 55 Op 5 1/0.560 - CDS 96178 - 97359 1621 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 97395 - 97454 7.6 100 56 Op 1 3/0.160 - CDS 97472 - 97723 305 ## COG4471 Uncharacterized protein conserved in bacteria 101 56 Op 2 . - CDS 97716 - 98159 341 ## COG3679 Uncharacterized conserved protein - Prom 98180 - 98239 1.6 - Term 98207 - 98233 1.0 102 56 Op 3 . - CDS 98256 - 98846 929 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 98915 - 98974 6.0 103 57 Tu 1 . - CDS 98978 - 99871 845 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 99898 - 99957 9.2 + Prom 99896 - 99955 6.8 104 58 Tu 1 . + CDS 99984 - 100853 865 ## COG0583 Transcriptional regulator + Term 100860 - 100897 0.2 - Term 100842 - 100892 8.1 105 59 Tu 1 . - CDS 100919 - 101548 1013 ## COG0035 Uracil phosphoribosyltransferase - Prom 101568 - 101627 7.0 - Term 101668 - 101704 3.3 106 60 Op 1 2/0.200 - CDS 101706 - 102869 897 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 107 60 Op 2 . - CDS 102871 - 103965 1086 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 104020 - 104079 4.9 - Term 104096 - 104138 9.8 108 61 Tu 1 . - CDS 104264 - 105898 1661 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 105930 - 105989 9.1 + Prom 105870 - 105929 10.1 109 62 Tu 1 . + CDS 105995 - 107446 1740 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase + Term 107575 - 107613 -0.8 + Prom 107492 - 107551 6.5 110 63 Op 1 14/0.000 + CDS 107623 - 108405 216 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 111 63 Op 2 33/0.000 + CDS 108427 - 109359 1199 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 109374 - 109425 4.2 112 63 Op 3 20/0.000 + CDS 109437 - 110459 962 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Prom 110479 - 110538 4.1 113 63 Op 4 . + CDS 110603 - 111457 823 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Term 111549 - 111593 9.2 - Term 111544 - 111572 2.3 114 64 Op 1 . - CDS 111578 - 112234 824 ## GALLO_1775 hypothetical protein 115 64 Op 2 . - CDS 112227 - 112742 331 ## GALLO_1776 hypothetical protein - Prom 112842 - 112901 5.8 + Prom 112729 - 112788 5.3 116 65 Tu 1 . + CDS 112852 - 113583 491 ## COG3022 Uncharacterized protein conserved in bacteria + Term 113600 - 113641 1.1 - Term 113587 - 113629 2.1 117 66 Op 1 . - CDS 113661 - 113804 177 ## 118 66 Op 2 . - CDS 113869 - 114801 1289 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 114826 - 114885 13.0 - Term 114889 - 114943 10.0 119 67 Op 1 . - CDS 114951 - 115598 637 ## GALLO_1780 hypothetical protein 120 67 Op 2 3/0.160 - CDS 115653 - 116441 895 ## COG1180 Pyruvate-formate lyase-activating enzyme 121 67 Op 3 . - CDS 116515 - 117846 1488 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 117969 - 118028 7.3 + Prom 117974 - 118033 7.3 122 68 Tu 1 . + CDS 118056 - 118844 922 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA + Term 118853 - 118891 5.6 - Term 118841 - 118878 2.4 123 69 Op 1 . - CDS 118879 - 120903 1784 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 124 69 Op 2 . - CDS 120953 - 121207 335 ## GALLO_1786 hypothetical protein 125 69 Op 3 6/0.080 - CDS 121213 - 121776 704 ## COG0500 SAM-dependent methyltransferases 126 69 Op 4 1/0.560 - CDS 121773 - 122714 949 ## COG1242 Predicted Fe-S oxidoreductase - Prom 122734 - 122793 4.6 - Term 122778 - 122810 3.1 127 70 Tu 1 . - CDS 122836 - 123492 690 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 123522 - 123581 5.2 128 71 Op 1 . - CDS 123614 - 124027 400 ## COG2510 Predicted membrane protein - Prom 124055 - 124114 4.3 - Term 124073 - 124112 3.9 129 71 Op 2 1/0.560 - CDS 124116 - 124685 656 ## COG3601 Predicted membrane protein - Prom 124906 - 124965 4.5 - Term 125072 - 125108 3.4 130 72 Tu 1 . - CDS 125116 - 125661 582 ## COG0219 Predicted rRNA methylase (SpoU class) - Prom 125789 - 125848 9.7 - Term 125923 - 125962 4.3 131 73 Tu 1 . - CDS 126063 - 126818 659 ## COG0300 Short-chain dehydrogenases of various substrate specificities - Prom 126862 - 126921 3.6 + Prom 126937 - 126996 8.2 132 74 Tu 1 . + CDS 127019 - 127381 351 ## COG0789 Predicted transcriptional regulators + Term 127416 - 127442 0.3 - Term 127705 - 127742 0.3 133 75 Tu 1 . - CDS 127824 - 129671 2048 ## COG0531 Amino acid transporters - Prom 129891 - 129950 7.2 + Prom 129734 - 129793 8.1 134 76 Op 1 17/0.000 + CDS 129929 - 131278 1255 ## COG0569 K+ transport systems, NAD-binding component 135 76 Op 2 . + CDS 131282 - 132721 1095 ## COG0168 Trk-type K+ transport systems, membrane components + Term 132727 - 132769 1.1 136 77 Op 1 2/0.200 - CDS 132742 - 132948 158 ## COG0759 Uncharacterized conserved protein 137 77 Op 2 12/0.040 - CDS 133002 - 133727 882 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 133748 - 133807 5.8 138 78 Op 1 21/0.000 - CDS 133809 - 134375 688 ## COG1386 Predicted transcriptional regulator containing the HTH domain 139 78 Op 2 3/0.160 - CDS 134431 - 135135 724 ## COG1354 Uncharacterized conserved protein 140 78 Op 3 2/0.200 - CDS 135135 - 135875 264 ## COG0582 Integrase 141 78 Op 4 3/0.160 - CDS 135868 - 136335 520 ## COG0517 FOG: CBS domain 142 78 Op 5 7/0.040 - CDS 136332 - 136853 489 ## COG0622 Predicted phosphoesterase 143 78 Op 6 3/0.160 - CDS 136835 - 137851 429 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 144 78 Op 7 3/0.160 - CDS 137869 - 138678 649 ## COG0796 Glutamate racemase - Prom 138785 - 138844 3.6 - Term 138699 - 138736 6.4 145 79 Tu 1 . - CDS 138851 - 139093 448 ## COG3763 Uncharacterized protein conserved in bacteria - Prom 139141 - 139200 7.0 - Term 139196 - 139251 7.4 146 80 Tu 1 . - CDS 139266 - 140510 1332 ## COG0019 Diaminopimelate decarboxylase - Prom 140536 - 140595 6.9 - Term 140576 - 140631 7.2 147 81 Op 1 1/0.560 - CDS 140638 - 141330 879 ## COG0670 Integral membrane protein, interacts with FtsH 148 81 Op 2 1/0.560 - CDS 141379 - 141882 510 ## COG1418 Predicted HD superfamily hydrolase - Prom 141903 - 141962 3.9 149 82 Tu 1 . - CDS 141982 - 142722 214 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Prom 142757 - 142816 2.4 + Prom 142664 - 142723 4.8 150 83 Op 1 2/0.200 + CDS 142758 - 143036 434 ## COG1254 Acylphosphatases + Prom 143041 - 143100 7.0 151 83 Op 2 . + CDS 143126 - 144046 971 ## COG0706 Preprotein translocase subunit YidC + Term 144058 - 144098 9.1 - Term 144035 - 144100 13.2 152 84 Op 1 3/0.160 - CDS 144137 - 144619 808 ## COG0782 Transcription elongation factor - Prom 144641 - 144700 2.8 - Term 144652 - 144692 9.2 153 84 Op 2 2/0.200 - CDS 144703 - 146406 1773 ## COG1559 Predicted periplasmic solute-binding protein - Prom 146430 - 146489 7.8 154 85 Tu 1 2/0.200 - CDS 146504 - 146995 461 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 147002 - 147039 4.4 155 86 Op 1 . - CDS 147051 - 148382 1494 ## COG0773 UDP-N-acetylmuramate-alanine ligase 156 86 Op 2 . - CDS 148417 - 149013 554 ## GALLO_1819 hypothetical protein - Prom 149192 - 149251 8.7 - Term 149232 - 149272 7.2 157 87 Tu 1 . - CDS 149283 - 152363 2563 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 152400 - 152459 9.3 - Term 152479 - 152506 -0.8 158 88 Tu 1 . - CDS 152516 - 153826 1700 ## COG1160 Predicted GTPases - Prom 153859 - 153918 3.8 - Term 153880 - 153917 1.1 159 89 Op 1 8/0.040 - CDS 153978 - 154880 1019 ## COG1484 DNA replication protein 160 89 Op 2 6/0.080 - CDS 154891 - 156048 1129 ## COG3611 Replication initiation/membrane attachment protein 161 89 Op 3 1/0.560 - CDS 156032 - 156550 561 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 156606 - 156665 4.5 162 90 Op 1 40/0.000 - CDS 156718 - 158151 1061 ## COG0642 Signal transduction histidine kinase 163 90 Op 2 . - CDS 158202 - 158894 892 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 159065 - 159124 11.1 164 91 Op 1 . - CDS 159296 - 160513 717 ## COG0582 Integrase 165 91 Op 2 . - CDS 160595 - 160798 234 ## SPH_1403 hypothetical protein - Prom 160836 - 160895 3.9 - Term 161188 - 161216 -1.0 166 92 Op 1 . - CDS 161259 - 161489 145 ## SPH_1405 hypothetical protein 167 92 Op 2 . - CDS 161486 - 161908 301 ## SAG0919 Tn916 hypothetical protein - Prom 162131 - 162190 3.8 + Prom 162274 - 162333 7.9 168 93 Tu 1 . + CDS 162413 - 162766 296 ## SPH_1408 transcriptional regulator, putative + Term 162787 - 162850 11.1 169 94 Tu 1 . - CDS 163112 - 165031 953 ## COG0480 Translation elongation factors (GTPases) Predicted protein(s) >gi|304425798|gb|AEEM01000018.1| GENE 1 58 - 1878 1648 606 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1578 NR:ns ## KEGG: GALLO_1578 # Name: not_defined # Def: putative pectate lyase related protein, polysaccharide lyase family # Organism: S.gallolyticus # Pathway: not_defined # 1 606 1 606 606 948 99.0 0 MKTTKQVLLVLFSAILMVGMTLAGMSSLKVDASTTVSWNFKNSSFKNLGTISSTTTVDGL TLVATDSLTMQVKAKNATVSGTDYTYALALSGRGDQNGRAVKVPVSGNDVIKVTLQSSSS TDARTLIVADSAGNQLTTMSAGTTASTQSYTYTGGGDAIWLYSQDSGIDIFKIQVDSNGT SSTSTTTTTSDTFATNTSDGTVVTSYSELLSAISQAENAGGGKIYVSGTSIACSGQIALS KANSNVQIIGVQNADGTYPELDFSSFMSSYIGKASSDSAVGIRITGSNYTLQNLIVEHAP DNGIQIKGTSAGNNKVSNCITRYNNDAGLQVTAGAYQNTIEYVCSYRNCDVYTRGGNADG FAPKLGAGSGNTFSYCYAWDNSDDGWDSYDKSGDVTPDISYTYCAVWNNGNPDVFTGKYD FDNGNSLDENLLLVQLIEAQDSSFATNYANGQFSLPTSSFIQTDAGTVSPSTWTGSSYDG NPNGFKLGSAYSTSSATRTLSYCLAFDESKKGFDNNNSSVTGNFNHCIAFDNGYNYYIQP LTITGWSAVYGFSGTSSDKLPSGYSVSTPSTSTQSSIRSTVESTKNAIIASCQANKIPGK VTFNIF >gi|304425798|gb|AEEM01000018.1| GENE 2 2278 - 4224 2671 648 aa, chain - ## HITS:1 COG:SP1631 KEGG:ns NR:ns ## COG: SP1631 COG0441 # Protein_GI_number: 15901467 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 644 1 644 647 1180 88.0 0 MVKITFPDGAVREFESGVTPFEIAQSISNSLAKKALAGKFNGQLIDTTREITEDGSIEIV TPDHEDALGILRHSAAHLFAQAAKRLFPDLCLGVGPAIEDGFYYDTDNKAGQISDEDLPR IEEEMKKIVKENFPCIRKEITIDEARELFKNDPYKLELIEEHGADEGGLTVYSQGEFTDL CRGPHVPSTGRIQVFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKAYLKQRQEAKE RDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYIVDKEVASGYLHVYTPPLAS VDLYKTSGHWDHYREDMFPTMDMGDGEEFVLRPMNCPHHIQVYKHHVHSYRELPIRIAEI GMMHRYEKSGALSGLQRVREMSLNDGHLFVTPEQIQEEFQKALQLIIDVYEDFNLTEYRF RLSLRDPKDTHKYYDDDEMWENAQSMLKAALDEMGVDYFEAEGEAAFYGPKLDIQVKTAL GNEETLSTIQLDFLLPERFGLTYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFP TWLAPHQVTVIPVSNEAHVDYAWEVAKVLRDKGVRVDVDERNEKMQLKIRQSQTKKIPYQ LIVGDKEMADKTVNVRRYGSKQTHTEAIDEFVDNILADINRKSRPDAE >gi|304425798|gb|AEEM01000018.1| GENE 3 4574 - 5908 1650 444 aa, chain - ## HITS:1 COG:SPy0516 KEGG:ns NR:ns ## COG: SPy0516 COG0438 # Protein_GI_number: 15674620 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 444 1 444 444 640 72.0 0 MRIGLFTDTYFPQVSGVSTSICTLKEELEKEGHEVYIFTTTDKAVKRYEDPTIIRLPSVP FVSFTDRRVVYRGLISSYKIAKQYKLDIIHTQTEFSVGVLGKMIAAALRIPAVHTYHTQY EDYVGYIAKGKIIKPGMVKYIIRGYLNDLDGVICPSRIVLNLLDGYDIKIPKRVIPTGIR VEEYERKDITAEDAKALRDKLGIADDETMLLSLSRVSYEKNIQAILKQFPEVLSENKRVK LVVVGDGPYLQDLKDLVAELGIEEAVIFTGMVPHDETALYYKASDFFISASTSETQGLTY TESLASGTPVIAHGNPYLDDIIDQKMFGTLFYHEEDLADAILDAIADTPAMDERTYKEKM YAISAEHFGKSVYAFYLDVLISAKNKKKSKLSLTVRSQDEKTSIKFAQSAIKMPAKAVKA TAKTSAKVVKAPKRLINSIRDFID >gi|304425798|gb|AEEM01000018.1| GENE 4 5910 - 6908 964 332 aa, chain - ## HITS:1 COG:SPy0515 KEGG:ns NR:ns ## COG: SPy0515 COG0438 # Protein_GI_number: 15674619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 332 1 332 332 521 74.0 1e-148 MKVLLYLEAENFLRKSGIGRAIKHQERALTMVGQEYTTNPKDDYDLVHINTYGLKSWHLL VKSKRAGKKVLMHGHSTEEDFRDSFIGSNLVSPIFRWYLCRFYQKADAIITPTEYSKSLI AGYGIKHPIYAVSNGIDLSRYVPDSAKEETFRRYFDIKPDEKVVVCAGLYFMRKGIDEFV KVAEQMPDVRFIWFGETNKWVVPHKVRSIVTRKHPSNVTFAGYIKGDVFEGAMSGADAFF FPSREETEGIVVLEALASHQHVVLRDIPVYHGWVDESCAELATDVDGFVGALRKVLAGKS QKQEAGYKVAESRSIDKVAHELVDVYEKVMEL >gi|304425798|gb|AEEM01000018.1| GENE 5 7004 - 8005 1324 333 aa, chain - ## HITS:1 COG:SPy0514 KEGG:ns NR:ns ## COG: SPy0514 COG1609 # Protein_GI_number: 15674618 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 333 1 333 333 563 92.0 1e-160 MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLA SKKTTTVGVVIPNIANSYFSILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQ VDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPSVNIDYKAAVADVVDILAKNN KEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGA VSMRMLTKIMNKEELEEKEILLNHGLTTRGTTR >gi|304425798|gb|AEEM01000018.1| GENE 6 8335 - 9420 1282 361 aa, chain + ## HITS:1 COG:SPy0513 KEGG:ns NR:ns ## COG: SPy0513 COG0006 # Protein_GI_number: 15674617 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Streptococcus pyogenes M1 GAS # 1 361 1 361 361 619 80.0 1e-177 MSKLDQIRSYLNQEKANIAVFSDPVTVNYLTGFYCDPHERQMFLFVYSDREPVLFVPALE VARASQIVAFPVFGYMDSENPWQKIKSSLPSTDSAKVFAEFDNLNVTKFQGLQTVFDGRF EDLTPFIQKMRLIKSQDEIEKMLIAGQFADKAVQVGFDNISLDNTETDVIAMIEFEMKKQ GVEKMSFDTMVLTGNNAANPHGIPGTNKIENNSLLLFDLGTDMHGYASDMTRTVAVGKPD QFKKDIYELCLEAQLTAQEFIKPGVLASEVDAAARNVIEKAGYGEYFNHRLGHGIGMTCH EFPSIMEGNDMEIQEGMCFSVEPGIYIPGKVGVRIEDCGHVTKSGFEVFTHTPKELLYFE G >gi|304425798|gb|AEEM01000018.1| GENE 7 9455 - 9781 461 108 aa, chain - ## HITS:1 COG:VNG1886a KEGG:ns NR:ns ## COG: VNG1886a COG2076 # Protein_GI_number: 16554504 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Halobacterium sp. NRC-1 # 16 106 17 107 112 80 47.0 5e-16 MSYLHLFIAILGELLGTNLLKLSDGFTKPIPTVSALLSYGVCFYFLSLAMRKIPLGVTYA TWSAVGLVLTAFISVMIFKETLNVYSIIGLILIIIGVVMVNLLGNAGH >gi|304425798|gb|AEEM01000018.1| GENE 8 9954 - 10208 195 84 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1585 NR:ns ## KEGG: GALLO_1585 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: Nicotinate and nicotinamide metabolism [PATH:sga00760] # 27 71 1 45 165 102 95.0 4e-21 MIYFNVLRGLDFTDKIAFKNFKKEAAMFYKTMTYCPECGHPLEKKFLKDEGDIPYCSQCA SFRFPFFNTALVRFYLMKIMIRFS >gi|304425798|gb|AEEM01000018.1| GENE 9 10223 - 10528 296 101 aa, chain + ## HITS:1 COG:MA1439 KEGG:ns NR:ns ## COG: MA1439 COG2816 # Protein_GI_number: 20090298 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Methanosarcina acetivorans str.C2A # 6 98 185 279 285 69 38.0 1e-12 MAEHILLAGYVSQGENAETTVAREIGEELGSRVKSLTFNASQYYERSNSLMINFAVTVTG NVSPNHEIDDWDWFSIEEAKRAIKDGSLAESFLLEFLKKID >gi|304425798|gb|AEEM01000018.1| GENE 10 10580 - 12349 1891 589 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1586 NR:ns ## KEGG: GALLO_1586 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 589 1 588 588 954 92.0 0 MKKATILFLLGLVVLAACQSQTQTDSSSSSSSKSTSTYFEVTSNPIEITTDNQYEVTLNA TDTWGFSVQEGQDVTDWLVLKSDKQALTDSSGVAQITAVDSDSSAITITIDSSKITGFSS NGGANLYIMPDSSSIVGTGDNHAHYSETSAKIGKYVIPKVSVDGTIEGEVTQEDGLTFTE NQITFQFTVDGEEADGSLMNTEAAKIVLVEGDGYYTSDYTYSDQGLSTKMKNGSISYTIE PEDLQISNSGYELGENGGGRNWSEIGGDGNGNYHLNFKLSGLEYNGLPVSVETFTADVYC YGRTFEVDDGSIYASDVAKWSTTAENNTPVLCDDYTDDLIIDWANGFDASKLKAKDLTLT MKSQYGDTLTLTAGDDFTIETKKNRTTIHVNYTYWAYTPVYQTLTVDVAKKHLTWDEDEY KVDDISHDYSIASVYVYNVMAGGQTGTQTWTIYGLDGLENWQQIFNAPTYTLSAEIDGET RYYSEANGGSLVDEASATSYDASTDTNLQLLDNTIYLTRQYNQTEVKSINGQDVTFTKVY SQAESAIKAPKDVTNVTVKSGFILGDTWEEHLRWPWQTFINEGYQGGRS >gi|304425798|gb|AEEM01000018.1| GENE 11 12406 - 14316 2334 636 aa, chain - ## HITS:1 COG:lin0026_2 KEGG:ns NR:ns ## COG: lin0026_2 COG1263 # Protein_GI_number: 16799105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Listeria innocua # 86 472 2 387 399 293 43.0 8e-79 MDYNKLGKDILTQVGGKENVSSVSHCITRVRFILKDEAKANDDVIKNMSGVLDVVKQGGQ YQVVVGPSVEKVYNAIIEDGDIATNEGDSTAANTEDDKGFINKALGLISSIFIPVLGMLS GSGMIKAVLALLSAFGWMSTESGTYIILSALSDALFYFFPVVLGWSAAKRFGLKEIYGMT LGAFLVYPTLVSAASGDAINTLFSGTVFEMDYQLTFLGIPVALQSYASTVIPIIAVTWFA SYVYKFFNKHIPDVLKMVFVPFCTLIVAGAASLIVIGPISIVLQNLLSSAVMWLLNLNIG IAGFLIGSLWSILVMFGLHWAILPFFQINVSEYGYDIINPLIFSGAPAVLGSAIGVALRT KNKDTRSMSFAAAVSSFFGVSEPALYGVMIPRKMILVTSLAAAGIGGAIAGLGGAKLYTF GAHGLLGFPTFINPDGIDSGFIALCISGVVAFVIALVSALVIGDKQDSAALLAKKAEEKT PAKAKEVTIVSPVNGQAVDLTGVSDQVFSQLLLGDGIAVIPSDGKVYAPEDAIVRVAYPT GHAVGLAGTAGDELLIHIGVDTVNLNGQYFTSHVEQGMKVKKGDLLVEFDLDGIKKAGYD PTVMVVITKTEQLDTVTPLTQGVVDTTTPLLSIKLK >gi|304425798|gb|AEEM01000018.1| GENE 12 14375 - 15604 1070 409 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1589 NR:ns ## KEGG: GALLO_1589 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 409 1 409 409 837 99.0 0 MKVGYGRADITPTAPFYLLGYKTPKRNQPAKGIHDHIYINGILFHNNEGQEVFLATGDLL EIEDIVAADIRREISQTYQIPFENIIIGVTHDHHSVRDFHKTWEFGRYNQEYYDFFVQCF LEVVKQCRQNLTEASVEYGQDLVLGYYSNRNHKGSQSDNIVSVTKFIHDGKAIAGIVNIA VHSTVLSGENMELTADLAGNLSTKLKEKWGFYPLMLIGCAGDSSNHYDRLGRDFAELERV TTGLAELIAPIKTTELSLGTESINVLELSHEVINDKKAYDKDLCLRIAGMKNGTIKTVGA QPVEHLIEKCEEQLTMPQFYDILQLGILDIGNLRFFIFPGELASAGGELLRNATDKTVLI AGYSNGFHHYFLEAKDYGLSFETIGNPVPAGTFETIIEKFSRASHLLDN >gi|304425798|gb|AEEM01000018.1| GENE 13 15609 - 16778 773 389 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1590 NR:ns ## KEGG: GALLO_1590 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 389 1 389 389 747 99.0 0 MLQAGAGKSRIQLIEQLLPLEKFTYCHDDLYCRAIILEDFVFISLDVTSLQNYAIRAIKD KVKASCEVLDSHIFISVTHTFSAPHTRSLKALEKADTETKQKNQYYLDLLLQAVEEALLL AKNNLQPVSLSCQNVTAQAQVNRDIELIDGYWLGKNPHGYSNHMIPMLTISSTSGALIAM IYSVDVQSSIVEKIGDGAISSDFIGLTTQKIEDKLNCVALFMLGAAADQTPNVSQESFDS LERCSDELASAILSQVTENEHFEGDFSLTQISVELDGQAIPDMKSLKPTREYHFELQGKK QVELAILTIGDFGLVMLKPELASITGKVIREQSPFSVTMIATMINGGQKYMVDEKSYDNY TYEAMNSMFARGSAEKVSKAIIKTLKERK >gi|304425798|gb|AEEM01000018.1| GENE 14 16790 - 17830 1113 346 aa, chain - ## HITS:1 COG:slr0619 KEGG:ns NR:ns ## COG: slr0619 COG2159 # Protein_GI_number: 16331820 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Synechocystis # 72 344 63 336 348 94 25.0 4e-19 MIIDSNLYWFDEDIFESEEKMEAFLASAPKQYDTKVQAGVLPDGRQQIIIERPKGFENLN YVQGEYKLETMLADMDLAGVDKAVLKIPGCQEWLTLEQCKAFNDGMYDYMKRSQGRLVPL AVLPPYGSKAVFAEMKRCFEELGFTGVQLVAHYGNYYLDNDLFATFFEELNKYQATVYVH HTPVPTQYDALYEYTNVRRSYGRCVDQTTAICRELYSGFFEKYPQLTFVHSMLGGAFFGL KNVLMPHKASKADTVQRFGGDDKHIEEHFAENIYFEMSHAQPWGKDALEYAVQVLGADHI IFGSSYPVRQEWLTKGADFVNNLDLTAEEKDLILGGNAQRLYHIND >gi|304425798|gb|AEEM01000018.1| GENE 15 18012 - 18761 613 249 aa, chain - ## HITS:1 COG:lin0339 KEGG:ns NR:ns ## COG: lin0339 COG3394 # Protein_GI_number: 16799416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 249 1 259 261 141 34.0 1e-33 MKKILLRADDLGYSEAVNYGIEKSVKEGLISSLGVMVNMPATQHGVDLIKDCPLALGVHT NICAGKPLTNPELIPSLVDENGNFKSSKQFRAAKEDFVVFEEVVLEIEAQYQKFLALFGR QPDYFEGHAVASINFFKGLETVAEKHGLKYSGFSTGGAPLTIGNSLVQFNMESMAPHYEP FDMLKRMVAKADDHVVQLAVFHPGYLDDDILTHSSLTIPRTQEVAMLTNPDVKQWLRKQD VELIDYRDL >gi|304425798|gb|AEEM01000018.1| GENE 16 18967 - 20544 1821 525 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1586 NR:ns ## KEGG: GALLO_1586 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 29 510 100 583 588 168 30.0 5e-40 MEKYRSYWFACLFVVGLLILTACSSLAKSSQSDVKVSITSSIVGLADTNNKSTLKETVYK STGPGDTNIYYYDESGKRVAYPEGTEIAGEKVTYSGEATIQLTSTGTIDDSKIDSSDAVI NLVDGDGYYTDELVLKATTLDNDWSNGQTTYTLSEGDIEWSLGDYVVSDSNSGKEWSAFG GDGNGVYTFNLQVSGLKYDGEEVDAQTFKVKVYIYGRDATDMAEQYNDLEDIVATESSSG KTPSNTIQWTWEGSGDKPNLADNNADNIYITWSKEDGEMDLSADAVTITLTSEYGDSLTL SDDDYQVFNHDNETQIALIYRNWASTPVYTEMTISVKTEGDTISQTYDIASVYVNMVQSG GGATTVDGTVTAYSYYGIANLDSVNQVMNDATYTLVSDDGQYYVENEDGTSYLTSDESSA TIFDASGEDEMNQALLGNVAVMTSRINQTITKTIDHSEITFTKKYDTSNINKSYQEMREA GLEAASGYVFPEDSQGSSMWAWQDKFQYGWTPDDGPVTTLPTYAY >gi|304425798|gb|AEEM01000018.1| GENE 17 20583 - 22034 1758 483 aa, chain - ## HITS:1 COG:lin0026_2 KEGG:ns NR:ns ## COG: lin0026_2 COG1263 # Protein_GI_number: 16799105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Listeria innocua # 98 469 11 376 399 270 44.0 6e-72 MAKNQADLVRTIIENVGGKDNVISLTHCVTRLRFVLKDDNLANKKVLTDLDEVMTVVQAG GQYQVVVGEKLVVPLYDLAMSQLQLASGDKEEPVAKESTGIVSKVMDSISGVLSPILMVL AAAGLVKGLMSFFSSLGWIDTDSGLYMILYALGDGFFYYFPILLGITAARKFKVNEFVGA AIGAALTYPTMVNLSSTADVLGTVFQGTSFEMSYYTTVFGIPVIMPGSGYTSSVIPIILA VLFAAKLDRSLRKALPDVLKNIVAPFVTLVVTVILTYLVIGPVATLISNSLAWLVSALYS IPYVGGAIAGAILGGGFGVLVMFGLHWAVLAIAISNIAVNGFDYIAVVTAVGPFVGMAQG LAICAKARSTKVRNLALPATISQICAVGEPLMYSILLPLKKEYAINIVCGAIGGVLLGIS GAKAYLMGGQGLFGLANYIDPATGNMSDFYKVLICLAIAMVLTFIVEFIMYSDKRAEEAL GSN >gi|304425798|gb|AEEM01000018.1| GENE 18 22049 - 23461 1237 470 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1609 NR:ns ## KEGG: GALLO_1609 # Name: not_defined # Def: putative tannase # Organism: S.gallolyticus # Pathway: not_defined # 1 470 1 470 470 947 95.0 0 MSINQWIFDETNNCYMSLKNVYCVQPKDSELEALHIFVPAVYMTADGTIDRDAVVTNKNG TTYTSQTVPIIFYNDIGGYAECQPAMVTSRNQRYLEDGYVLVSVGARGRQSQNGIGKAPA GLVDLKAAVRWLRKHHNNIPGDIEKIISVGTSAGGAMSSLLGSTGNRAEYLPFLEEIGAE LDQRDDVFAAQCFCPITNLEHADMAYEWMFQAKKIYTFNSRVRPQIINKRQQLLSKSLAA EFPEYVNSLHLGESLTADGRGGDFYQGILNQLSLSLNKFLAKHAQTNDEKEELARELDPQ GLWCHFENGQATVFDLDAYVVNYMGRKKGCPAFDSLDYQTPETEVFGSRDKNHRHFSQDI AKHVEKLPALSVYQKAFQADLVEEDLILARKLLNPMTFLQSDLEEKQVASHYRICLGAKD ADTSFAISYLLALALKKHGIDVHYELIWGMGHCDADYNEEFSQWVDAIVH >gi|304425798|gb|AEEM01000018.1| GENE 19 23812 - 24552 683 246 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1610 NR:ns ## KEGG: GALLO_1610 # Name: not_defined # Def: putative transcriptional regulator, RpiR family # Organism: S.gallolyticus # Pathway: not_defined # 1 246 1 246 246 410 87.0 1e-113 MNPLIVMESLKEQFSPAELAIYDLIKKQPSLVTHATTTDLAKKAGVSQPTLTRFVKKQLG YKRYQDFRFDFINWLSSTSTSNPNEDNEYFARLNKLLELTKATLTDEIMAELVTFISPKK HLFATGGAKSFLSAKLFETLMRKMEIYVSSYSIDYLDDAVNYLKKDDLLLIFSASGDSNY IQKITNLKCATLLITANPNAKYRQYFDKVITLPTLSGDWEYDSISPIMFDVFTELLVTHY AKQVKN >gi|304425798|gb|AEEM01000018.1| GENE 20 24667 - 25074 338 135 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1611 NR:ns ## KEGG: GALLO_1611 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 131 1 131 135 255 96.0 3e-67 MATFEVTDYGYSIQAQVDYIGADLFIQLTGGSHPHIGTVTTYCKENADKQVVRFPSHSGR FHKDDVLADVLLEEIAELLPQNCVITSGVHVDGISKEQIAGAFEMTKELASKIATWLKNE ESPTSHPKYQKKNIK >gi|304425798|gb|AEEM01000018.1| GENE 21 25075 - 25644 607 189 aa, chain - ## HITS:1 COG:Z4047 KEGG:ns NR:ns ## COG: Z4047 COG0163 # Protein_GI_number: 15803256 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase # Organism: Escherichia coli O157:H7 EDL933 # 5 188 2 185 197 214 52.0 9e-56 MSKKRIVVAISGASGTIYAINLLKKLKEYPDIETHVVMSDWAHENLKLELDMSHDEFASL CDVLYSNKDLGAKIASGSFLTDGMVIVPASMKTVAGIACGFSDNLIGRAADVALKEQRKL IIVPRETPLNTIHLENLTKLSRMGVQVIPPVPAFYNHPKTLQDIIDHNTAKLLDALHIHN DYAGRWDGD >gi|304425798|gb|AEEM01000018.1| GENE 22 25960 - 27435 1989 491 aa, chain - ## HITS:1 COG:MA0246 KEGG:ns NR:ns ## COG: MA0246 COG0043 # Protein_GI_number: 20089144 # Func_class: H Coenzyme transport and metabolism # Function: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases # Organism: Methanosarcina acetivorans str.C2A # 114 482 90 421 422 132 31.0 2e-30 MSEQPYDLRKVLEELKEIPGQYHETDVEIDPNAEISGVYRYIGAGGTVERPTQEGPAMTF NNIKGFPNVRVNIGTMASRKRVGHILHHDYKDLGHLLNKAVENPVKPVKVSKDQAPAQEV VHLATDDDFDIRKLIAAPTNTEYDAGPYITTGLVYGSTPDKSMSDVTIHRMVLEDKDTIG IYIMPGGRHIGAFLSEYQKLNKPMPITINIGLDPAILIGATFEPPTTPLGYNELWVAGAL RNEPVQLVDSIAVDEVGIARSEFIIEGEILPNETIQEDINTHTGHAMPEFPGYNGPANPA LNVIKVKAVTHRKDNPIMQTTIGPSEEHVSMAGIPTEASILNLVDKAIPGKVLNVYNPPA GGGKLMTIMQIRKENPADEGIQRQAALLAFSSFKELKTVILVDEDVDIFDMNDVMWTINT RFQAHKDIMSLEGMRNHPLDPSERPEYSPEHIRVRGMSSKLVLDGTVPFDMKDQFERAKF KEVPDWKKYLD >gi|304425798|gb|AEEM01000018.1| GENE 23 27524 - 28408 793 294 aa, chain - ## HITS:1 COG:CAC1481 KEGG:ns NR:ns ## COG: CAC1481 COG0583 # Protein_GI_number: 15894760 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 285 1 285 292 219 41.0 4e-57 MNFQKFQVFLSLCETLNYTETAEQLYTTQGSISKQIIALEKELGVILFNRKHRQISLTEE GEIVRVYVQKIMGTFQEMQETLEDLSEQEKHKLTIHGIPSMSSYPIISDIAAFQKQYPDY TVVVEEEEADQLMHSLDDGICDVVFTRSFTKAAPDIYDSLTLDYDRFVLVLPENHPLANK EKLDLAELKDETFFQLGNKTQLLQKVRELCHTYGFEPKMGYQGNRINLIIDFIEKEMGVS VMMEKLVAPFKTKAIICRPLEVDMVSEMNLIRRKKKTTPALDVFWKGMQEKYSK >gi|304425798|gb|AEEM01000018.1| GENE 24 28601 - 29329 865 242 aa, chain + ## HITS:1 COG:CAC1482 KEGG:ns NR:ns ## COG: CAC1482 COG1811 # Protein_GI_number: 15894761 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Clostridium acetobutylicum # 1 242 1 242 242 290 70.0 2e-78 MPTGVIINALSVVFGGLLGGLVGNKLSEDFKTQINMIFGVCSMGMGISSIGLMKYMPAVI FAIVIGTGIGLALHLGDWINKGGALMQRSMAKIVPNDHSSLSHEDYLATLLTVIVLFCAS GTGIYGSLDAGMTGDSTILISKSILDFFTAAIFACNLGYVVSLVAIPQFIIFCCLFFLSA FIVPLTTPDMIADFKACGGFLMLATGFRMVKLKMFPIADMIPAMILVMPLSWFWVNVILP LL >gi|304425798|gb|AEEM01000018.1| GENE 25 29684 - 30112 617 142 aa, chain + ## HITS:1 COG:RSp1644 KEGG:ns NR:ns ## COG: RSp1644 COG1846 # Protein_GI_number: 17549863 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 9 133 2 130 138 60 28.0 1e-09 MSKNIQESLDSCLFFTVKKLDRALNKLADESFQKVGMTPTYAFILLILAEEDGKLQKDIA QILYIAPSTLTRLVEKLIYKGYVTTLAEGRTRQVYLTVKGRNLLPDIQEAWNDLHIRYKA LLGDDYADNLASIINLNAEKLR >gi|304425798|gb|AEEM01000018.1| GENE 26 30231 - 30734 760 167 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1617 NR:ns ## KEGG: GALLO_1617 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 166 1 166 167 320 97.0 1e-86 MLSINFPEKFTPGLTDNFVSNKVVFKDLDFDKILDGLLDTGKWETYYENSSDVHMYNQDS TVLKNDTRFRFKTFGFDVEAQVEEYDLDAENGVLRLAWHGWNEAEGDEFLDVYHAWLVQK LDRNRVRILTQESQIGTPVKELAKSVPNTMMLGHQAWLDGLVAFAKY >gi|304425798|gb|AEEM01000018.1| GENE 27 30783 - 31460 803 225 aa, chain + ## HITS:1 COG:SPy0512 KEGG:ns NR:ns ## COG: SPy0512 COG0778 # Protein_GI_number: 15674616 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Streptococcus pyogenes M1 GAS # 9 222 8 218 221 315 70.0 6e-86 MSKEDFKKQIRTAFDHRVAVRVYNDQEISHDDMDFILDTAWLSPSSIGLEAWRFVVLDRK QIEKLRDELKAVAWGAQYQLDTASHFVLLIAEKNARYDSESVKNSLIRRGLGEGDALNSR LATYESFQKNDMKMADNPRALFDWTAKQTYIALGNMMTTASMLGIDSCPIEGFNYEKVNS ILANAGIINPDNEGIASMVSFGYRLRDPKHPRSRKPREEVITWLD >gi|304425798|gb|AEEM01000018.1| GENE 28 31660 - 33132 1817 490 aa, chain - ## HITS:1 COG:CAC1405 KEGG:ns NR:ns ## COG: CAC1405 COG2723 # Protein_GI_number: 15894684 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Clostridium acetobutylicum # 4 487 2 472 473 484 50.0 1e-136 MSYELPKGFLWGGATADFQYEGGFDEGGRGLLSHDYETDGSQENPRHHTMQMPDGSIINP RSSFFYADPVPKEAQPVFLEDEYYPSHRAVDFYHHYKEDIALMAGMGFNVFRFSICWSRI FPTGEEETPNEEGLAFYDDVINEMAKYGMEPLITICHDELPMHLALKYDGWSSRHVIDCY VKYCKTLFERYGDRCRYWLTFNEINAVRGFGPCGTRQSEGQDRYQAAHHMFVASARAVKL GHEMMPNSQFGAMYAMSELYPATCKPEDVFHRLQERRENWYFIDIMGRGYYPRYAKEIWR RRGVKEIVFADGDEELLREGQLDFISFSYYRSNTTKAGDDWFNVGGSTNPYLKETPWGWP VDPLGLRHVMNEIYDRIQKPIFIVENGMGAIDELDENGIVQDDYRIDYLRDHLQAMADAI IIDGVECLGYTMWGPVDLVSLSTGEMKKRYGFIYVDMDDKGNGSLKRTPKKSYAWMKEII ASNGAKLSEI >gi|304425798|gb|AEEM01000018.1| GENE 29 33132 - 35003 2253 623 aa, chain - ## HITS:1 COG:SPy0572_2 KEGG:ns NR:ns ## COG: SPy0572_2 COG1263 # Protein_GI_number: 15674662 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 110 455 16 364 364 215 36.0 2e-55 MDYKKLAQEIVTNVGDVDNIQTLSHCMTRLRFQLKDASKANKEALENLEGVLGVVYAGGQ YMVILGQHLLQTYDVMMNDFNITSGGSIDENLDGDLTPKEPWTWKNAGSKIIGFVSSSVT PMIPGLIAGGMLKVVLLLIVTFIDSNFATSSSYLLLSAIADAPFYFMPIFVAYGAANKLG ATPIYAMASAAALLHGNFTGLVTAGDPITLFGISVRLLSYGTSLLPALLIAILAYYVEKF LNKIIPNIFKAIFVGMGTIFVAGSLGFIILGPLGNMIGQGIASLFMFLEGTVGPIAVGLL AAALPWMVMAGMHTALAPFMTQLLTNPGYDAMIRPAFLLHNMAEGGAVIGVTARTKDKAK RGELLSIAIGCIVAGVTEPAIYGVNLKYKKPMYGVMAGGFVGGIVAGILGAKAYEMGYSN ILALPIFGKTVLAAVAGIIVAIVVAAVVTYLLGIDTSKEDAKLTVTEPVRQVVPDDAILA IADGELVPLEKVNDEVFAQKLMGDGIAFKPTSDFITAPANGELTTVFPTGHAFGVTRPDG VELLVHIGINTVELNGEGFDVLARAGDSISAGQPIVRIDRDRINQKGYDTTTMLIITNAN GKTIELPQMGDVKQGQRLDKEEN >gi|304425798|gb|AEEM01000018.1| GENE 30 35160 - 35909 541 249 aa, chain + ## HITS:1 COG:VC1775 KEGG:ns NR:ns ## COG: VC1775 COG1737 # Protein_GI_number: 15641778 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 2 152 6 161 278 63 26.0 3e-10 MNILQKMQLHEQEYSKSEAKVYHFLKENFEKLETLTITRIATNSHTSTSAVLRFCQILGY KGFKDFRYDAINYIHQKPKEENEDILDQIADNYSVILNQMKHLERQAIDELVDCILKRQH LHILGIFLSSLPARYLHFGLQDLGIASQLASDLNSGNHLSNIIDEEDTLIMFSISGSSAN FNNTLSAISKNMPQNSYLITLNEHAAAAKYFNHVITLPGNSISKQSIVDTQAITMIFVEI LLNMAHRKL >gi|304425798|gb|AEEM01000018.1| GENE 31 35984 - 36451 793 155 aa, chain - ## HITS:1 COG:SPy0504 KEGG:ns NR:ns ## COG: SPy0504 COG0691 # Protein_GI_number: 15674609 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 155 1 155 155 251 83.0 3e-67 MPKGDGNVVAQNKKARHDYNIVDTIEAGIVLTGTEIKSVRAARIQLKDGYAQIKNGEAWL INVHISPFEQGNIWNQDPERTRKLLLKKREIEKLSNDLKGTGMTLVPLKVYLKNGFAKVL LGVAKGKHDYDKRETIKRREQDRDIKRQMKNFNAR >gi|304425798|gb|AEEM01000018.1| GENE 32 36498 - 38831 1369 777 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 715 3 710 730 531 40 1e-150 MNEKIIAYLEEHGKVNINELAAGLDMAGAEKFPKLIKEISKLESQGKLRFDDHGNLALRK KIEKKKEITVTGVFRANKAGFGFLAVDENEDDMFVGRNDVGHAVDGDTVEAVVKKPANRL KGTAAEVRIVGIVERSLKTVVGKFILDDEKPKYAGYIKSKNQKIQQKIYIKKEPVLLDGT EIIKVDIDKYPTRGHDYFVGHVRDIVGHQGDVGIDVLEVLESMDIKSEFPEDVMAEANAV PDAPSEKDMIGRVDLRNEITFTIDGADAKDLDDAVHIKLLNNGNFELGVHIADVSYYVTE GSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSCLMEIDRNGHVVNH QICQSVIKTTFRMTYSDVNDIIAGDEELIEQYQPIVDSIHHMTALHNILETMRVRRGALN FDTSEAKIIVNDKGMPVDIVLRQRGIAERMIESFMLAANETVAEHFAKRKLPFIYRIHEE PKAEKLQKFLDYASIFGVQIHGTANKITQQALQDFMAKVEGKPGAEVLNMMLLRSMQQAR YSEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRMIREYTQLTDEKIEHFRNVIPELATSS STLERRAIDAERVVEAMKKAEYMEEYVGQEFDGVVASVVKFGMFIELPNTIEGLVHITTL PEFYNYNERTLTLQGEKSGKVFRVGQPIKIKLTRADKETGDIDFEYIPSEYDVVEKVKKS RKDRSGKEKRRPKADNHKGSKSNKPRNRKSSTSTSKKSGKKPFYKEVAKKKSRKAKK >gi|304425798|gb|AEEM01000018.1| GENE 33 39057 - 39293 198 78 aa, chain - ## HITS:1 COG:SPy0502 KEGG:ns NR:ns ## COG: SPy0502 COG1314 # Protein_GI_number: 15674607 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Streptococcus pyogenes M1 GAS # 1 78 1 78 78 105 88.0 3e-23 MYNILLTTLLVLSVIIVIAIFLQPQKNPSSNVFDNSGSEALFERTKARGFEAFMQRFTAV LVFFWLAIALALAILSSK >gi|304425798|gb|AEEM01000018.1| GENE 34 39421 - 39567 228 48 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|222152690|ref|YP_002561866.1| 50S ribosomal protein L33 2 [Streptococcus uberis 0140J] # 1 48 1 48 48 92 83 1e-17 MRIKINLKCSSCGSKNYLTSKNKTTHPERIQVLKYCPKERKVTLHIES >gi|304425798|gb|AEEM01000018.1| GENE 35 39564 - 40739 976 391 aa, chain - ## HITS:1 COG:SPy0501 KEGG:ns NR:ns ## COG: SPy0501 COG0477 # Protein_GI_number: 15674606 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 391 7 397 397 522 74.0 1e-148 MRVAWLGNFFTGASFSLVMPFMALYVEQLGAPKNKVEWYAGLAVSLSALTSALIAPVWGR LADRYGRKPMMVRASLVMTFTMGGLAFVPNVFWLLVLRILNGLFSGYVPNSTALIASQAP KNRSGYALGTLATGVIGGSLVGPLLGGVLAEILGIRQVFLLVGFILLICNLMTVFLVKED FQPVTKAEALSTRELFSSIKDKQILIGLFVTSMIIQVSAQSIAPILTLYIRHLGQTENLM FVSGLIVSALGFSSMLSSSTLGKIGDRIGNHRLLLIALFYSFSMYVLCALAQNSLQLGIV RFLYGFGTGALMPSINSLLTKITPREGISRIFSYNQMFMNMGQVIGPFIGSAIATGLGYR SVFYVTSLIVFVNFVWSLINFRKYLKVKEIV >gi|304425798|gb|AEEM01000018.1| GENE 36 40891 - 41505 481 204 aa, chain - ## HITS:1 COG:SPy0498 KEGG:ns NR:ns ## COG: SPy0498 COG0237 # Protein_GI_number: 15674604 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Streptococcus pyogenes M1 GAS # 11 204 2 195 197 226 60.0 3e-59 MSCMSKTMTKIIGITGGIASGKSTVVAEIRKQGYQVIDADQVVHELQEKGGKLYQTLVEW LGNNILQENGELDRQKLGQVIFGNKEMMAKSSRLQNEIIRQELANRRNQLAQTEEVFFMD IPLLIELDYMDWFDEVWLVYVDEKTQLDRLVMRNHYTRSEAQKRIASQMSTEAKKAYADK LLDNRGNLQALKEQVDRLLHTLSD >gi|304425798|gb|AEEM01000018.1| GENE 37 41481 - 42371 646 296 aa, chain - ## HITS:1 COG:SPy0497 KEGG:ns NR:ns ## COG: SPy0497 COG0266 # Protein_GI_number: 15674603 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Streptococcus pyogenes M1 GAS # 24 296 1 273 275 391 67.0 1e-109 MSYHLRQDSYFSLSRLTAWYRIVMPELPEVETVRRGLESLIVGRKIVAVDVRVPKIVKTD LVAFETEILGQTFQNIGRRGKYLLLMLNKQVIISHLRMEGKYLLFPEQVPDNKHFHVLFQ LDDGSTLVYQDVRKFGTMELLYPNQIEAYFQKKKLGPEPTKETFDLSEFTRKLKASKKII KPYLLDQTLVVGLGNIYVDEALWAAKIHPERVSLSLTDSEIALLHDEIIRILQLGISKGG TTIRTYHNAFGEDGNMQQFLQVYGKTGEPCPRCATPIEKIKVGGRGTHLCPACQKR >gi|304425798|gb|AEEM01000018.1| GENE 38 42750 - 42839 60 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNPSGKASEKDDATGKSGFSVSSLFSNFV >gi|304425798|gb|AEEM01000018.1| GENE 39 43055 - 43951 1053 298 aa, chain - ## HITS:1 COG:SPy0476 KEGG:ns NR:ns ## COG: SPy0476 COG1159 # Protein_GI_number: 15674592 # Func_class: R General function prediction only # Function: GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 298 1 298 298 536 94.0 1e-152 MFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTP GIHKPKNALGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERLKAAKIPVILVIN KIDKVHPDQLLEQIDDFRSQMDFKEIVPISALQGNNVETLMNILKDNLEEGFQYFPEDQI TDHPERFLVSEMIREKILKLTEQEVPHSVAVIVESMKRDPETDKVHIRATIMVERDSQKG IIIGKQGAMLKKIGKMARRDIEIMLGDKVYLETWVKVKKNWRDKKLDLADFGYNEKEY >gi|304425798|gb|AEEM01000018.1| GENE 40 44010 - 44417 405 135 aa, chain - ## HITS:1 COG:SPy0475 KEGG:ns NR:ns ## COG: SPy0475 COG0818 # Protein_GI_number: 15674591 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Streptococcus pyogenes M1 GAS # 1 128 1 129 135 179 78.0 8e-46 MDSRDNNSPKKWKNRTLVASMEFAITGIITAFKEERNMRKHMVSAILASIAGAVFRISAI EWLFLLLAIFLVITFEIINSAIENVVDLASNYHFSMLAKNAKDMAAGAVLVISGYAVLTG LIIFVPKIIALIFGE >gi|304425798|gb|AEEM01000018.1| GENE 41 44398 - 44895 691 165 aa, chain - ## HITS:1 COG:SPy0473 KEGG:ns NR:ns ## COG: SPy0473 COG0319 # Protein_GI_number: 15674590 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 165 1 165 165 238 84.0 4e-63 MYVEMIDETGQVSEAIKKQTLDLLQFAAEKTGKDNKEMAVTFVTNERSHELNLEYRDTDR PTDVISLEYKPESSLSFSEEDLEENPELAEMLDEFDAYIGELFISVDKAREQAEEYGHSF EREMGFLAVHGFLHINGYDHYTPEEEKEMFTLQEEILTAYGLKRQ >gi|304425798|gb|AEEM01000018.1| GENE 42 45138 - 47369 2885 743 aa, chain - ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 45 650 46 659 660 604 52.0 1e-172 MVFRNKEKMKKKLKLGLGSALIFTMLGTGTFVQVSVVNADTEQVSMKEGTVLHAWCWSFN TIKDNMQAIKDAGYTSVQTSPINAVVAGNGGNKSLTNWYYQYQPTVYTIGNYQLGTEEEF KEMNRVADQYGIKIIVDAVLNHTTSDYNQIDQQIKSIPNWTHGNTQITNWGNRYDVTQNS LLGLYDWNTQNEYVQQYLLNFLKQAVADGADGFRYDAAKHIELPGEYGSNFWNVILNNGS EFQYGEILQDSISNEAGYGQLMSITASNYGQQIRYALKDRRVAAGNLANYQVSGVDPANL VLWVESHDTYANDDQESTWMSDEDIRLGWAMITARAKGTPLFFSRPVGGGNGTRFTGQSQ IGDAGSDLYKDATVAAVNKFHNAMVGESEYIRNPNGDEQVAMIERGSKGAVIVNLVSGDK YLDSETNLADGTYTDQVSGRQFNVSNGRITGSVPSRSAVVLYDAKDDETVSASIDGYNEG NNSISAATEVTLKAKNAQTATYKIDNGQEVAFQDGDKITVGEGLEAGQSTTVTVSATGAD GQTASKSYTFTMKDPNAETNIYFQNPDNWSDVYVYMYNATNTQLLGAWPGTKMTKDSSGR YTISVPASYETEGVKVLFTNNSGAQYPQNTGFDFKAEGVYSKDGLVADVPEGMTRISFDN PGGWDSANLYAYYGNPVQMPLGAWPGQAMTKDAQGNFYIDLPEEYLDLNVKIIFSQPGTS NQFPASIGFDLVKSGNYNKDGLK >gi|304425798|gb|AEEM01000018.1| GENE 43 47709 - 48263 275 184 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|116511598|ref|YP_808814.1| acetyltransferase [Lactococcus lactis subsp. cremoris SK11] # 6 179 8 181 185 110 37 4e-23 MITERLRQYQILETERLILRPVTLADAEAMFAYVSDEENTRWNFPANKTLEETKAAIKNI YLKTPLGRYGIVLKGTNAFIGTIDLMNFSDEKMAELGYIINKKYWNQGLATEASQKLIAL CFEKLELEEVHGYCALNNPASAHVLEKLGMTELEHIPNDKILNGQSITSQHFVITKTKWQ EIQK >gi|304425798|gb|AEEM01000018.1| GENE 44 48260 - 48490 362 76 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1634 NR:ns ## KEGG: GALLO_1634 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 76 1 76 76 85 97.0 5e-16 MSSRELSAEELRKLANYLSQQANDLEMTLEAVKKVAVSSQEIADEAEMLSKMGENANYLA NSVQKIIAHEMEKIKK >gi|304425798|gb|AEEM01000018.1| GENE 45 48681 - 49751 1319 356 aa, chain - ## HITS:1 COG:SPy0471 KEGG:ns NR:ns ## COG: SPy0471 COG1702 # Protein_GI_number: 15674588 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Streptococcus pyogenes M1 GAS # 1 346 1 348 350 553 83.0 1e-157 MQEYSVEITLNHPDDVLALFGSNERHLKLIEDNLGVIIHARTERVQILGDDEKSVELARV TIQALLVLVSRGMLVNTSDVVTALSMAQNGSIDKFVALYEEEIIKDNSGKPIRVKTLGQK VYVDSVKSHDVVFGIGPAGTGKTFLAVTLAVTALKRGQVKRIILTRPAVEAGESLGFLPG DLKEKVDPYLRPVYDALYQILGKEQTTRLMERDIIEIAPLAYMRGRTLDDAFVILDEAQN TTIMQMKMFLTRLGFNSKMIVNGDTSQIDLPKKVKSGLIDATEKLQHIKQVDFVHFSAND VVRHPVVAEIINAYEKAAPKQRSHSPKASEEAVAESGFASYETIGQLANDKEANND >gi|304425798|gb|AEEM01000018.1| GENE 46 49841 - 51010 856 389 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1636 NR:ns ## KEGG: GALLO_1636 # Name: not_defined # Def: putative permease, major facilitator superfamily # Organism: S.gallolyticus # Pathway: not_defined # 1 389 1 389 389 625 100.0 1e-178 MFKKSYRHNIALVGASEFFGFFGITSFWLLFLSQHGMSFGQIGILESLFHLTSLLSEVPS GVLADRFTYRTNLYLGRLMSILSCLFMLFGQGNFWIYAFGMVLNAWAYNFDSGTSTAMLF ESAKEAGLENKFLKFSSFLSAVAEATRTLGAVVAGFFVHGLLDMTYVIQIFFSLIVIILI AMMKEPAFKKEREEPASLLRILKTVVREFKVNRHLFYWLITSQVFCVMMCMFYFYYQNEL EILPSWQISLLMLISSVINIGAVWLASKIGQRFKAVALLPLLVGLTGMLYVLAITKLPLI YMIIYLLADGLYAFFLPIFNNDLQVMIPSDVRATMLSVTAMFFSLFMIVIFPMTGFLIDW LGFSLTFLLLGIVLMLLAPLLILKRNDLK >gi|304425798|gb|AEEM01000018.1| GENE 47 51330 - 51545 303 71 aa, chain - ## HITS:1 COG:SPy0467 KEGG:ns NR:ns ## COG: SPy0467 COG4479 # Protein_GI_number: 15674585 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 71 1 71 71 115 83.0 3e-26 MRKSFYTWLMTQRNPKSHEPVAILADLVFDDTTFPKHTDNFETISRYLEDEADFAFNLSE FDKIWEEYLAH >gi|304425798|gb|AEEM01000018.1| GENE 48 51542 - 52051 622 169 aa, chain - ## HITS:1 COG:SPy0466 KEGG:ns NR:ns ## COG: SPy0466 COG0225 # Protein_GI_number: 15674584 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Streptococcus pyogenes M1 GAS # 1 168 1 168 169 281 82.0 3e-76 MERAIFAGGCFWCMVQPFEEQEGILSVRSGYTGGHVANPTYEQVKAHETGHTEAVEIIFD EEKISYADLVEIYWAQTDPTDAFGQFEDRGDNYRPVIFYSDERQHQIAEQSKAALQASGR FKEPIVTAIEPVQPFYLAEDYHQGFYKKNPEHYAESSAIRHQFLKENWQ >gi|304425798|gb|AEEM01000018.1| GENE 49 52338 - 53204 483 288 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 4 287 1 283 285 190 39 3e-47 MNNLLATIITGLVIDENAKAYFVQKDGVTFMLDKAEGEHKIGDMVKGFAYTDVHQKARLT TADVATTRTTYGWGVVTEVRRDLGVFLDTGLADKQFVVSLDVLPDMKELWPKKGDKLYVH LDVDKKDRIWAIPAQPEVFQKMAGPAYNNMQNEKLRAIVYRLKLSGTFVYLPDNNMLGFI HPSERYAEPRLGEEVTARVIGFREVDRTLNLSLKPRSFEMLENDSQMILTYLQSNGGFMT LNDKSSPADIKATFGISKGQFKKALGGLMKARKVKQDQFGTELIDEEK >gi|304425798|gb|AEEM01000018.1| GENE 50 53261 - 53818 1012 185 aa, chain - ## HITS:1 COG:SP0945 KEGG:ns NR:ns ## COG: SP0945 COG0233 # Protein_GI_number: 15900824 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Streptococcus pneumoniae TIGR4 # 1 185 1 185 185 258 86.0 5e-69 MANAIIEKAKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVP EARVLLISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKELAKEVKKV GENAKVAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDAMTANKEK ELLEV >gi|304425798|gb|AEEM01000018.1| GENE 51 53872 - 54609 1157 245 aa, chain - ## HITS:1 COG:SPy0462 KEGG:ns NR:ns ## COG: SPy0462 COG0528 # Protein_GI_number: 15674581 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 239 1 239 242 423 94.0 1e-118 MEPKYKRILIKLSGEALAGEKGVGIDLTTVQTIAKEIAEVHSSGVEIALVIGGGNLWRGE PAAAAGMDRVQADYTGMLGTVMNALVMADSLQQYGVDTRVQTAIPMQNVAEPYIRGRALR HLEKGRIVIFGAGIGSPYFSTDTTAALRAAEIEAEAILMAKNGVDGVYNADPKKDANAVK FDELTHGEVIQRGLKIMDATASTLSMDNDIDLVVFNMNEAGNIKRVVFGEAIGTTVSNKA EHHKK >gi|304425798|gb|AEEM01000018.1| GENE 52 54817 - 55506 1114 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225868099|ref|YP_002744047.1| 50S ribosomal protein L1 [Streptococcus equi subsp. zooepidemicus] # 1 229 1 229 229 433 97 1e-120 MAKKSKQMRAALEKIDSTKAYSVEEAVALAKETNFAKFDASVEVAYKLNIDVRKADQQIR GAMVLPNGTGKTQRVLVFARGAKAEEAKAAGADFVGEDDLVAKINDGWLDFDVVIATPDM MAIVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGKITYRADKAGNVQAIIGKVSF DADKLVENFKAIHEVIVKAKPATAKGTYMTNLSITTTQGVGIKVDPSSF >gi|304425798|gb|AEEM01000018.1| GENE 53 55661 - 56086 688 141 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15674579|ref|NP_268753.1| 50S ribosomal protein L11 [Streptococcus pyogenes M1 GAS] # 1 141 1 141 141 269 97 5e-71 MAKKVEKVVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGMIIPVVISV YEDKSFDFVTKTPPAAVLLKKAAGVEKGSGTPNTTKVATVTRAQVQEIAETKMPDLNAAN IESAMRMIEGTARSMGFTVVD >gi|304425798|gb|AEEM01000018.1| GENE 54 56436 - 56789 267 117 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1644 NR:ns ## KEGG: GALLO_1644 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 3 117 1 115 115 125 100.0 4e-28 MMMYKLFSFSFVFLTPIFAYILVTFFKLKRFGILFTDIAFPIFAFEIGLVGNKFLGSSIF FYYLICLSLLAIILTVTFLRRDHSFSYRRFGKFFWRSGFILTFLFYIMILILIFTIT >gi|304425798|gb|AEEM01000018.1| GENE 55 56822 - 59233 2843 803 aa, chain - ## HITS:1 COG:SPy0458 KEGG:ns NR:ns ## COG: SPy0458 COG1674 # Protein_GI_number: 15674577 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 798 1 801 801 1103 73.0 0 MAKSKSRKKGRKSRRPTKAEIKRQKALQRFILAIVTAVIFFFAIARLGIFGITVYNIVRF VVGSLAYFLMFAVLIYLIGFKWFHKQTGLVGGFVVTMIGLLLEWHAYLFSLTAYRDKEVF STTARLLYGDIINFKVSKFVGGGMLGAVLYKPVAFLFSNVGTFLIGALFITLGLFLMSPW EVYDIVEFFKEKSQEWAAKNEIRKQKRFVKREEKKALAEQKRQEKAQKEEEERLAQMTVD QETGEILENPTDNETSLFDNLPENDLPTEPEILAYDHTLDGLEEPPLEDYPTMDSAPSQE AAQAMLDEEDDGEPLEVDFTAKANLLYKLPTIDLFAPDKPKNQSKEKNLVRRNIKVLEDT FNSFGIDVKVERAEIGPSVTKYEVKPAVGVRVNRISNLADDLALALAAKDVRIEAPIPGK SLVGIEVPNSEIATVTFRELWEQANTDPNKLLEVPLGKAVNGTARTFDLARMPHLLVAGS TGSGKSVAVNGIIASILMKARPDQVKFMMIDPKMVELSVYNDIPHLLIPVVTNPRKAARA LQKVVDEMENRYELFSHFGVRNIAGYNAKVEEFNAQSEQKQIPLPLIVVIVDELADLMMV ASKEVEDAIIRLGQKARAAGIHMILATQRPSVDVISGLIKANVPSRVAFAVSSGTDSRTI LDENGAEKLLGRGDMLFKPIDENHPVRLQGSFISDEDVERIVGFVKDQADADYDDSFDPG EVSESDLKSGGGGVQEGDPLFEDAKALVLETQKASASMLQRRLSVGFNRATRLMDELEAA GVIGPAEGTKPRKVLMTNPNPEA >gi|304425798|gb|AEEM01000018.1| GENE 56 59421 - 60257 747 278 aa, chain + ## HITS:1 COG:SPy0457 KEGG:ns NR:ns ## COG: SPy0457 COG0652 # Protein_GI_number: 15674576 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Streptococcus pyogenes M1 GAS # 1 277 1 266 268 358 67.0 8e-99 MKKFWSFGLMVLCLASLSGCESITRAIRGDDYVDAKIAASSSEAAASASASASASSSKAY QKELKKALSADQSAFPQLSTDVADDEAEVIMHTSMGDITLKLFPKYAPLAVENFLTHAKD GYYDGLLFHRVISDFMIQSGDPNGDGTGGQSIWNGKDKSIDSGNGFVNEISPYLYNIRGA LAMANAGADTNGSQFFINQNSDDQSSQLSSDNYPQSIIDAYANGGNPSLDKNYTVFGQVI DGMDVVDKIAAVDTDDNDKPTTDVTITSIEVVKDCDFD >gi|304425798|gb|AEEM01000018.1| GENE 57 60410 - 61060 447 216 aa, chain + ## HITS:1 COG:SPy0450 KEGG:ns NR:ns ## COG: SPy0450 COG1321 # Protein_GI_number: 15674572 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 212 1 212 215 247 61.0 1e-65 MTPNKEDYLKCIHELGETRTKITNKRIAELMKVSAPAVSEMVKKMIAEDLIVKDKELGYY LTKKGLLLVSELYRKHRLIEVFLANHLHYNADEIHQEAEVLEHTVSTIFIDRLEENLNFP AFCPHGGTIPKKGDFLVEIHHQTLSQIETLGTYKISRTHDEAHLLNYLEEHELAINDVVE LVKVDDYAKTHTLAYHSRQLVIPERIAEQIYVEKVD >gi|304425798|gb|AEEM01000018.1| GENE 58 61105 - 61797 827 230 aa, chain - ## HITS:1 COG:SP0991 KEGG:ns NR:ns ## COG: SP0991 COG0775 # Protein_GI_number: 15900866 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 229 1 229 230 278 69.0 4e-75 MKIGIIAAMEQELKLLVEHLENKVEHQVLGNTYYEGKLGNHDVVLVQSGVGKVMSAMSVA VLADHFGVDALINTGSAGAVATGLNIGDVVVADKLVYHDVDVTAFGYDYGQMAGQPLYFE SDKGFIDTFEQVLNKANVASKIGLIATGDSFIAGQDKIDAIKAAFPEVQAVEMEGAAIAQ AAHSLNKPFIVVRAMSDTAAHDANITFDEFIIEAGKQSAKILMAFLEKLA >gi|304425798|gb|AEEM01000018.1| GENE 59 61881 - 62210 448 109 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1720 NR:ns ## KEGG: GALLO_1720 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 109 1 109 109 159 99.0 3e-38 MGKPLLTDEIIERANRGEIFYDDQYLEDDEETKVIRTDLYDTIVPYEKEEEETQGFLDKW KDRKKKDQYVYKSRRIENAKRSKFQRKLNLIMFVVIVLLIALFFAVFNL >gi|304425798|gb|AEEM01000018.1| GENE 60 62216 - 62764 673 182 aa, chain - ## HITS:1 COG:SPy0444 KEGG:ns NR:ns ## COG: SPy0444 COG0494 # Protein_GI_number: 15674568 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 182 1 182 184 278 78.0 3e-75 MDFEEKTLKRTEIFDGHIFKVVVDDVELPNDLGQAKRELIFHRGAVAVLAVTDENKIILV KQYRKAIEKISYEIPAGKLEIGENGSEQDAAARELEEETGYSGDLKQIHEFYTAIGFCNE KIKLYQATHLQKVPNPRPQDDDEVLEILELTYQECMDLVKSGAIEDAKTIIALQYYALHF GG >gi|304425798|gb|AEEM01000018.1| GENE 61 62970 - 64352 1789 460 aa, chain - ## HITS:1 COG:SP0988 KEGG:ns NR:ns ## COG: SP0988 COG1207 # Protein_GI_number: 15900863 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Streptococcus pneumoniae TIGR4 # 1 459 1 459 459 674 77.0 0 MSNYAIILAAGKGTRMKSDLPKVLHKVSGITMLEHVFRAVSALNPEKNVTVIGHKAEMVR EVLADKSEFVMQTEQLGTGHAVMMAEDELAGLEGQTLVIAGDTPLITGESLKELIDFHVS HKNVATILTATAENPFGYGRIIRNENGEVLKIVEQKDASEFERQVKEINTGTYVFDNKRL FEALKNINTNNAQGEYYLTDVISIFRNNGEKVGAYVLHDFDESLGVNDRVALATAEDIMR RRINKKHMVNGVTFQNPAATYIDVDVEIAPDVMIEANVTLKGNTKVGSGSVLTNGTYLVD ATIGENVVITNSMIEQSVVKDGVTIGPFAHVRPDSTLEKNVHIGNFVEVKSSIVGEDTKA GHLTYIGNATVGSEVNFGAGTIIANYDGQHKFKTTIGNNVFVGSNSTIIAPVTLGDNALT AAGSTISDDVEKDALAIGRGRQVNKAGYALNKPHHPNNKK >gi|304425798|gb|AEEM01000018.1| GENE 62 64496 - 65458 1133 320 aa, chain - ## HITS:1 COG:SPy0441 KEGG:ns NR:ns ## COG: SPy0441 COG0673 # Protein_GI_number: 15674565 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 319 1 319 319 432 66.0 1e-121 MKLAILGTGKIVDEVLPVLKEINGIELSAILSTPRSLEKAQKLAEIYGISQASSDYDSIL VNPDVDTVYVALPNHLHYDYAKKALLAGKHVICEKPFTLTLAEFEDLAKIAEQNNRILLE AITNQYLGNFAAIKGNLAKLGDIKIVECNYSQYSSRYDAFKRGEIAPAFDPEKGGGALRD LNIYNIHLVIGLFGKPEKVQYLANMERGVDTSGILIMDYGHFKAACIGAKDCAAEIKSTI QGNKGSIAIIGATNTLPELALSLNNQSMTMINENTLNHRMHDEFVAFQAIIEQEDMTATK LALEHSRAVMEVLDAAVNSL >gi|304425798|gb|AEEM01000018.1| GENE 63 65494 - 65937 483 147 aa, chain - ## HITS:1 COG:SP0796 KEGG:ns NR:ns ## COG: SP0796 COG4405 # Protein_GI_number: 15900689 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 145 1 145 146 205 67.0 3e-53 MNAQELWNKYKKINPSIGDDIDAWQFGLEADLLAKLVLEGTKTATASAYDLYAVDNDPLP EVGSYDVILDSKDQAVCIIQIKKVSVVPFKEVSEKHAFKEGEGDKSLAYWRDVHEAFFKP YFKECGLTFTPESLIVLEEFEVVYPTV >gi|304425798|gb|AEEM01000018.1| GENE 64 66136 - 66834 215 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 4 227 6 238 242 87 31 4e-16 MTKVLITGVSSGIGLAQARLFLKNGCAVYGVDKSQAPQIQDDNFHFLQLDLTTDLAALYD FVQDVDILCNTAGILDAYKPLLEVSDDELERVFQTNFFATVKITRHYLAKMVERKSGIII NMCSIASFIAGGGGAAYTASKHALAGFTRQLALDYAKDKIQIFGIAPGAVKTAMTASDFE PGGLADWVAQETPIGRWSNPEEIADLTEFLASGKASSMQGEIIKIDGGWSLK >gi|304425798|gb|AEEM01000018.1| GENE 65 66827 - 67063 253 78 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1726 NR:ns ## KEGG: GALLO_1726 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 78 1 78 78 160 100.0 2e-38 MTFEEILPGLKAKKKYVRTGWGGAENYVQLFDTLEQNGVALPVTPYFLINVSGDGEGFSM WSPTPCDVLATDWVEVHD >gi|304425798|gb|AEEM01000018.1| GENE 66 67137 - 67961 421 274 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1727 NR:ns ## KEGG: GALLO_1727 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 274 1 274 274 424 97.0 1e-117 MEEIIKSYYTETKKVLDSLSQSNREYFEKVEDYMIFSGIFYDEISLRKVILQMALDLKDA EQDGLTAVEYFGDNPKKMVDDVICEAKVATRISQISLFTIFIGVICYCHFLSDFSSDGLV TINVFEYLSSVVFGFVVMAVFLTFYKQSIYGLTLRKDKLGSYLTIVVIAALIIALVYLFD RFRMVFVGPIYTFSTLVSIVIASILVIGGLFLVTRRKLFRVFIPIIVGYFLAGILALAIN TAGIQHNVLQFAPIIVICLSLLVFLIMSRLLIFK >gi|304425798|gb|AEEM01000018.1| GENE 67 67945 - 68283 410 112 aa, chain - ## HITS:1 COG:SP0789 KEGG:ns NR:ns ## COG: SP0789 COG1695 # Protein_GI_number: 15900682 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 103 1 103 106 125 58.0 2e-29 MRETQLLKGVLDGCVLQIIAKEDIYGYELVQRLKAAGFTNIVAGTVYPLLQKLEKKEMIT SCMKPSPDGPPRKYFQITVKGEAYLADFWDEWHDLVHKVSQLEAKKKDGRDY >gi|304425798|gb|AEEM01000018.1| GENE 68 68420 - 69652 1376 410 aa, chain - ## HITS:1 COG:SP0616 KEGG:ns NR:ns ## COG: SP0616 COG2348 # Protein_GI_number: 15900524 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 1 410 1 410 410 493 60.0 1e-139 MTLKILSREDYEQVSATFKERSFMQSVEMADLLEKRGFDITFLGLEADGAIQVAGVLYSM PMTGGLHMEINSGPASTDTAYLTEFYRELQAYAKENGALELIVKPYDTYQTFDSHGEPND DEKPELITCLTELGYHFDGLQTGYPGGEPDWHYVKDLTGLTPETLRKSFSKKGRPLANKT NSFGIKVRRLERDELHIFKEITASTSERREYVDKPLDYYEAFYDSFGDKCEFMIATINFQ DYLKNLQASHETIASELAVLNQKIADGVNSAKVNKQKAQLDKQIATFDVRINEAKELIEK HGSEDVVLAGSLFIYTPQEAVYLFSGSYTEFNKFYAPVALQEHVMTEALNRGIHFYTFLG IQGIFDGSDGVLRFKQNFNGYIVRKMGTFRYYPRPMLHKAITLLKKILGR >gi|304425798|gb|AEEM01000018.1| GENE 69 69847 - 71850 2520 667 aa, chain - ## HITS:1 COG:SPy0422_1 KEGG:ns NR:ns ## COG: SPy0422_1 COG0143 # Protein_GI_number: 15674551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 4 546 3 544 544 956 84.0 0 MTSKQPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNHEVFYLTGLDEHGQKIQQ KAEEAGITPQAYVDGMAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIY LGEYSGWYSVSDEEFFTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYAD RLVEFFHTHPDFIQPDGRMNEIIKNFIEPGLEDLAVSRTSFTWGVKVPSNPKHVVYVWID ALLNYATALGYGQEEHANFDKFWNEGTVFHMVGKDILRFHSIYWPIMLMMLDMKLPDRLI AHGWFVMKDGKMSKSKGNVVYPEMLVERYGLDPLRYYLMRSLPVGSDGTFTPEDYVGRIN YELANDLGNLLNRTVAMINKYFGGDVPAYVENVTAFDADLAGVVEEKLAEYHKQMNAVDY PRALDAVWSVISRTNKYIDETAPWVLAKDDAKRDELAAVMAHLAASLRVVAHLIQPFMMT TSNAIMEQLGLGSDFDLENLTLADFPEGVKVVAKGTPIFPRLDMEAEIDYIKANMGGAAA ATEEKEWNPADVELKNEKKAIKFDDFDKVEIRVAEVKEVSKVEGSEKLLKFRLDAGDGED RQILSGIAKFYPNEQELIGKKLQIVANLKPRKMMGLLSQGMILSAEHDGNLTVLTVDPSV PNGSQIG >gi|304425798|gb|AEEM01000018.1| GENE 70 71969 - 73282 1280 437 aa, chain - ## HITS:1 COG:SP2065 KEGG:ns NR:ns ## COG: SP2065 COG0534 # Protein_GI_number: 15901884 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 19 431 3 405 411 195 32.0 2e-49 MTNTLHKSILNLAIPATIENILQTLVGFIDTLMIAKLGLTAVTAVGVSNTILNVYLAVYI AIGVGSSALVSRNIGAKNSKAAKSVAVQSIYLGLIVSLVLGLVAVLFGHYLLLWMGLDAT ELAAAKTYFYLVGGLTCFNSLMTVLASIIRATGDTKSPMTISAITNVTNVCVDYVLIFGI GSFAGLGILGTAIGTVIARIFGTVFLFKKLQSSALALKKEDLRFGSRDKELISLTIPATA ERLVMRLGQVVYMSLIVAISSKTYASHNIAGSIESFVYMPAYGLATAAAVLIGMAKGEKD YHKIRQVGFWSTLYGVVILGFFGLFLFFGGAYFATFFTSDSSAIAQVGIALKIDGFIQPV LAISLILAGALQGMGDTKTPLYSTIIGMWGIRVVGVFLLGQYLGLGIAGVWLSILIDLAI RAIFLSYRFNKVTKILA >gi|304425798|gb|AEEM01000018.1| GENE 71 73409 - 73957 333 182 aa, chain + ## HITS:1 COG:SPy0846 KEGG:ns NR:ns ## COG: SPy0846 COG1309 # Protein_GI_number: 15674880 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 3 181 5 172 173 114 34.0 1e-25 MTRQEVKTQEAIFTAFFDLLAQKSFHDIRIGELCQKANIGRSTFYSHFTSKDDLLITVCQ QLFQHVFVTSSLAEHQTNQSLHKGSLEEQITHLYQHFKENADKVTTLYQLEDDYFSRSLQ AELQKYLVPILKPIYFKENALPDQLLDQYIIDTFLTTLSWWLHAQPDLEAIEITHYYLKL LA >gi|304425798|gb|AEEM01000018.1| GENE 72 74171 - 74998 869 275 aa, chain + ## HITS:1 COG:SP1845 KEGG:ns NR:ns ## COG: SP1845 COG0708 # Protein_GI_number: 15901674 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Streptococcus pneumoniae TIGR4 # 1 275 1 275 275 473 84.0 1e-133 MKLISWNIDSLNAALTSDSARAVMSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL QDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGRIITLEFD KFFVTQVYTPNAGDGLKRLAERQIWDEKYADYLAELDQVKPVLATGDYNVAHKEIDLAHP SSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVYSWWAQRSKTSKINNSGWRID YWLTSSRIADKITKSEMIDSGARQDHTPIVLEIDL >gi|304425798|gb|AEEM01000018.1| GENE 73 75063 - 76445 1288 460 aa, chain - ## HITS:1 COG:lin2733 KEGG:ns NR:ns ## COG: lin2733 COG0477 # Protein_GI_number: 16801794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 8 453 19 477 493 248 33.0 2e-65 MLLSEKRKYLIFITILLSTTIASMLSTALTTALTPIAKDLGVGLETGQWLTSGFSLAMGI MMPLTAYLIRRFPTRRLYLIGILVFMLGLVVSFFANNFTVMMSGRILQALGTGLLLAMSQ VVILTIFPAEKRGTVMGWYGLASGAAPVLAPTFAGLLIDYFSWRAIFAFVFGIMILLLIL AISCFDDVLEVKQSPFDIWSFILSGLAFGGVTLGIGNLGDSSLFSTIVFVPLVIGLVSGI IFSVRQLSLETPFLNLRILSQKQFLLSVLGSMLLYLVMMGSSVMLPLYVQSIRGLSATIS GLVTLPGSLAMTIVSPLAGKIYDKLGMKRLFISGALFMFVSTGAMFFISLKTPIWIPALI NVLRSLSIGCLMMPLITWGTSFVDETFVADATALLTSLRTIAGAIGSAIFVGIMTAVATN SAATYGVNANIHGMNVSFFAMSLFALILLLLALSCPKSEK >gi|304425798|gb|AEEM01000018.1| GENE 74 76613 - 77158 694 181 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1735 NR:ns ## KEGG: GALLO_1735 # Name: not_defined # Def: putative transcriptional regulator, TetR family # Organism: S.gallolyticus # Pathway: not_defined # 1 168 1 168 181 294 98.0 1e-78 MTHSAQEKLKQSLILLLDDFDFDQISISKICKEAGVHRSTFYAYYDNQSDLLEDAMAYLA DIFTTEFASLQETFEAEKERDSLLDSYYLLPYLTYIKNHQKLYKIYLKNPTDFQHEKVVE QHINEQFLNRYHAKGFTDEKMIRYMTHFYTAGIRRIIYDWVMDDCHDDITYIIKIIHTII F >gi|304425798|gb|AEEM01000018.1| GENE 75 77423 - 77995 319 190 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1736 NR:ns ## KEGG: GALLO_1736 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 190 86 275 275 303 99.0 2e-81 MTTGAIYNAFYVIMSLVSCFALQSVWYLIYAAYHLLFAIAKFYTGQSMQRNKGDSWKFYQ YVGYFLMIAAFIFHIMVIFVSQHDDNIGVAYPFLVYLIALATFINFISSMIQLFRLRRSS SAYLKASKNISFASSLFSLFFLQTMMLRQFSGPADAYFSWLITIILGTCVFSSLLILGIT MIISGRKNNQ >gi|304425798|gb|AEEM01000018.1| GENE 76 78033 - 78380 346 115 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1737 NR:ns ## KEGG: GALLO_1737 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 115 1 115 115 224 99.0 8e-58 MSVEEEIIAIHKRINEAIVARDFEWLEHYYPDDMVIRHSGGVTQTKSEWLKTLKDGTFRY YDYHLLEANVTPIGKERAILSFRATTDASIYGYRKVWKMQFDTTFKKINGEWKPA >gi|304425798|gb|AEEM01000018.1| GENE 77 78389 - 79225 1007 278 aa, chain - ## HITS:1 COG:L126956 KEGG:ns NR:ns ## COG: L126956 COG0656 # Protein_GI_number: 15673856 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Lactococcus lactis # 3 278 2 281 281 306 57.0 3e-83 MEQTYLSLNNGLKMPQFGVGVYQVAPKDTKQNVLEALKLGYRHIDTAHAYQNEREVGQAV KESGLKREDIFITSKLWPSDYADSSAIDKMLVRLDTDYIDLLLLHQQFGDYMTAYQNMEK AVAEGKVRSIGLSNFESERLEEILEAATIKPAALQVECHPYYQQDELKKRIAPYGTIIES WYPLGHGDNALLNEPLFLNLADKYGKTPAQIILRWHIQVGNAVFPRSLHHLDENIAIFDF SLTDEEMNQIKHLDKGTRYFTMTLEEQERAMGSWKPAD >gi|304425798|gb|AEEM01000018.1| GENE 78 79238 - 80059 1355 273 aa, chain - ## HITS:1 COG:RSc0215 KEGG:ns NR:ns ## COG: RSc0215 COG1028 # Protein_GI_number: 17544934 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 3 272 2 275 275 222 47.0 6e-58 MAKEVIVLLGAGKMGLAIVRRIASGKKVVLGDLSSKILETAKEELLDAGFDVDTKIVDGS NRRSITEFAEYAASFGQISRYIHTAGVSPNMAKPEDIIKVDLIGTAIALEVFRDYIGNGG AGLVISSQAGHMIPFAADFEKQLAQVPADELSDLAEIKAVDNSGYAYGMAKRANIVRVQH EAILWGDKGARINTVSPGIIITPLARHELQAQPESYARMIEASATGRTGTPDEVARAGEF LLSDDSSFITGTDLLIDGGVMAVIKAGRYQLGM >gi|304425798|gb|AEEM01000018.1| GENE 79 80164 - 81036 546 290 aa, chain + ## HITS:1 COG:STM2575 KEGG:ns NR:ns ## COG: STM2575 COG0583 # Protein_GI_number: 16765895 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 194 1 190 308 87 31.0 4e-17 MNSKQIECALELALTLNFGQAAENLYITQPTLSYHIKTLEDEIGFQLFERSGKGAVLTPA GKQFTQDLRQIQNHLQEAIERGQNFGYRYNETIRLAIFDIKALPILPQAIKIFSHTHPNT YIDVQFNATDALEQLLNRQLDIALAITSSLPNITELEATFLYQSPIYLVVENSHPLSTLK TAKSTDLNNQTLMVSQISPKELKEAQKKVISKSQVKTFNSPNHSSTITNILSGRGVCLVP GFLKDNTPNLTWIPFEETSGIACSIIKRKDNHREVVQDFQKLLNELLQDN >gi|304425798|gb|AEEM01000018.1| GENE 80 81173 - 81529 460 118 aa, chain - ## HITS:1 COG:SP1462 KEGG:ns NR:ns ## COG: SP1462 COG1393 # Protein_GI_number: 15901312 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pneumoniae TIGR4 # 1 115 1 115 118 142 60.0 2e-34 MFTFYEYPKCSTCRRAKAELQELGVDFVAVDITVDTPKAEQLKEWIENSTYTIKNFFNTS GQVYRALGLKDKIDSLSIDEAASLLASDGMLIKRPVLVKDNQVLQLGHRKSYAELLEK >gi|304425798|gb|AEEM01000018.1| GENE 81 81542 - 82027 575 161 aa, chain - ## HITS:1 COG:SP1463 KEGG:ns NR:ns ## COG: SP1463 COG0350 # Protein_GI_number: 15901313 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 4 161 7 165 176 162 51.0 2e-40 MLRKLVYQSELGEIVVLANEKGLLGCYFLGQKYFEYGYEREKIIEETTIFLDEAKVWLDD YFAGKNPDPSRLTLVPYGTAFQRKVWKVLAQIPYGETMTYGEIAEKINCGSAQAVGGAVG KNPLSIIVPCHRVLGNQGQLTGYAGGVERKCWLLEHEKANF >gi|304425798|gb|AEEM01000018.1| GENE 82 82086 - 82313 259 75 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1743 NR:ns ## KEGG: GALLO_1743 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 75 1 75 75 142 98.0 3e-33 MDKKQLKEYQKQLRERFFSVQFDNKKQNLVLLVDRETGVEYLGVTAGLGDPSGITPLINA DGTPKINTEWQNHQL >gi|304425798|gb|AEEM01000018.1| GENE 83 82414 - 83592 1635 392 aa, chain - ## HITS:1 COG:L0084 KEGG:ns NR:ns ## COG: L0084 COG0111 # Protein_GI_number: 15672586 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Lactococcus lactis # 1 392 1 395 398 420 54.0 1e-117 MVYSVKTFNNINQVGLKELGNHFQIDGDLAENPDAYILRSQNLHGTVFPENLKAIARAGA GTNNIPIDEATVAGIVVFNTPGANANAVKEAVLASILMSARDYIAANAWVNTLSGDDVPK QVEAGKKQFAGNEISGKTLGVIGLGAIGGRIANYAQRLGMNVLGYDPYVSIETAWNISHH VKRVADVKEIFANSDYITVHVPLTDETRNTFDSEAFGLMQKGTVVINFARGELVDNAALF EAIEAGVVKRYITDFGTEELLNKDKITVFPHVGGSTAEAELNCAIMAGKTIRQFMETGEI TNSVNFPNVHQALTAPYRITLINKNVPNIVAKISTAVSDLGINIDNIINRSKGDYAYTLL DLDETDKAKIDHLVANFEASDNIVRVRLITKK >gi|304425798|gb|AEEM01000018.1| GENE 84 83638 - 84186 687 182 aa, chain - ## HITS:1 COG:SP1464 KEGG:ns NR:ns ## COG: SP1464 COG0454 # Protein_GI_number: 15901314 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 163 1 163 164 201 60.0 6e-52 MEIRQAFPNEVDQIMLVIEDARKQLAASGSNQWQGKYPDEDTIYDDVLTGQGYVALLDGQ IVAYAAVITDGDPAYDKIYDGQWKHNNHRYITFHRVAVLSSVTGRKVAQTFLQGLIEGTD GHDFRCDTHEKNGAMQHIFEKLGYVYCGKVPIDGERLAYQKIKTKDENALYQEVDEADHH SY >gi|304425798|gb|AEEM01000018.1| GENE 85 84257 - 85348 1278 363 aa, chain - ## HITS:1 COG:L0083 KEGG:ns NR:ns ## COG: L0083 COG1932 # Protein_GI_number: 15672585 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Lactococcus lactis # 3 359 2 361 365 443 60.0 1e-124 MTIYNFSAGPAVLPKPVLEQAQREMLDYQGSGMSVLEMSHRSKEFDNIIKEAEQLLRELM AIPDNYKVMFLQGGASTQFTMLPLNLAKGRKAYYLVGGSWGKKAYAEAVKLSKTVPFEPL LLASSEDTVYDHIPTFDSKDIDPEAAYVHITTNNTIEGTSIYDLPDTNGVPIVADMSSNI LAVRYNVEDFALIYAGAQKNIGPAGVTVVIVREDFLNDEPTLSAMLDYRIQAEAGSLYNT PPAYNIYIAKLVFEWVKAFGGVDKMEAANREKSGLLYDFIDQSDFYTNPVKNPAERSVAN VPFVTPSKELDAKFVAEATPLGFKNIKGHRSVGGMRASLYNAFPRQGVLDLIEFMKKFEA ENK >gi|304425798|gb|AEEM01000018.1| GENE 86 85484 - 86122 896 212 aa, chain + ## HITS:1 COG:SPy0408 KEGG:ns NR:ns ## COG: SPy0408 COG3142 # Protein_GI_number: 15674545 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Streptococcus pyogenes M1 GAS # 2 208 1 208 209 276 67.0 2e-74 MIIKEFCAENTTLLNQLDQSVKRVELCDNLAVGGTTPSYGVIKEAARYLHEKDIALATMI RPRGGNFVYNDSELRIMEDDILHAVELESDSLVLGLLTEDNHIDQDGIEQLLPATQGLPL VFHMAFDHIPLEEQKEALDQLVELGFTRILTHGSAQNNDIFENIAHLKDLVDYADGRIEI MIGGGVTADNYQELVEKTGAQAAHGTKINCVL >gi|304425798|gb|AEEM01000018.1| GENE 87 86254 - 86595 503 113 aa, chain - ## HITS:1 COG:L0235 KEGG:ns NR:ns ## COG: L0235 COG0347 # Protein_GI_number: 15673573 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Lactococcus lactis # 1 113 1 113 113 135 68.0 2e-32 MKKIEAIIRSDRLEDLKDALSKAGFTKGMTVSQVLGYGNQRGFAEYVRGQKIVPTLLAKV KVEIVTHDAAVDEIVDIICKAVRTGEVGDGKIFILPIEEVVRIRTGERGGDAV >gi|304425798|gb|AEEM01000018.1| GENE 88 86652 - 87887 1436 411 aa, chain - ## HITS:1 COG:L0236 KEGG:ns NR:ns ## COG: L0236 COG0004 # Protein_GI_number: 15673574 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Lactococcus lactis # 1 411 1 413 413 482 68.0 1e-136 MDAGSIAFMIICASLVFLMTPGLAFFYGGLGRRKNVINTMMMCVIPIAVASVMWMICGYS LSFGGDGSLIGNFSHLFFNGVSETASTRGLEIPDALFAAFQMMFPIITVAILTGAAAGRM RFTPLIIFIIFWLLLVYFPFAHMVWDEGLLAQWGTIDFAGGDVVHITSGVSGLVLALVLG KRRDYNRLEYRPHNVPFVFLGAGLLWFGWFGFNAGSALAADGLAVHAFVTTHISAAAAML SWLLVEKVLTGKFSLVGASTGLVAGLVAITPGAGFVSTWSSLFIGLCVSPVCYFAISVLK SKFGYDDALDAFGCHGIGGIFGGLVTGLFTTPELALDGNNIGLIYGNAHLFLVTVAAIIF TIVWSAVATFVIIKVISIFTSIRVEDRAEAIGLDDSEHEETAYPTFMGLDS >gi|304425798|gb|AEEM01000018.1| GENE 89 88287 - 89153 853 288 aa, chain - ## HITS:1 COG:SPy0406 KEGG:ns NR:ns ## COG: SPy0406 COG0313 # Protein_GI_number: 15674543 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 287 287 420 72.0 1e-117 MKVQKSFKNQTTYGKLYLVPTPIGNMQDMTYRAVEMLKNADFVCAEDTRNTGLLLKHFDI SAKQISFHEHNAYEKIPELIALMKEGKILAQVSDAGMPSISDPGHDLVKAAIAEEIPVVA IPGASAGITALIASGLAPQPHIFYGFLPRKAKQQKEFFEAKKQYPETQIFYESPYRVADT LDNMLAVYGDRKIVLVRELTKLYEEYQRGYISEILEYIAQNPLKGECLIVVSGQDETVTS EEMPEDVNPAELVAQLVEAGDKPNQAIKKIAKTYGLNRQEVYNAYHQL >gi|304425798|gb|AEEM01000018.1| GENE 90 89160 - 89480 382 106 aa, chain - ## HITS:1 COG:SPy0405 KEGG:ns NR:ns ## COG: SPy0405 COG4467 # Protein_GI_number: 15674542 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 106 1 107 107 144 76.0 5e-35 MDKKELFDAFDGFSQNLMITLAEIEAMKKQVQSLLEENTALRLENDKIRTRLAQLEQDTP AKSSKQGKRYIEGIYHDGFHICNDYYGQRRENDEECMFCMEVLDRE >gi|304425798|gb|AEEM01000018.1| GENE 91 89473 - 90273 623 266 aa, chain - ## HITS:1 COG:BS_yaaT KEGG:ns NR:ns ## COG: BS_yaaT COG1774 # Protein_GI_number: 16077100 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus subtilis # 1 266 1 267 275 227 42.0 1e-59 MTEVLSVKYEETGSIVYVLPNKKYKLGDYVVVKNKKGCRLAQVVTSNEVIDEVKLPAEMD SVTRLANEKDKQAFQENIDLAKHSFSTVNELILANDLKMKVIDIIFPLERSYVLITFSAE ERVDFRQLLRDLAGHFKTRIELRQINSREEAKVYGGVGPCGRALCCSSFLGEFPPVSIKM VKNQGMSLSTGKTAGICGRLMCCLSFEDDFYKTSKEKFPDVGTEIETADGLGVIAGIDVF SDTVKVRLPEKHTLLTYALEEVKVRG >gi|304425798|gb|AEEM01000018.1| GENE 92 90270 - 91145 600 291 aa, chain - ## HITS:1 COG:SPy0400 KEGG:ns NR:ns ## COG: SPy0400 COG0470 # Protein_GI_number: 15674540 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Streptococcus pyogenes M1 GAS # 1 291 1 290 291 300 54.0 1e-81 MELEHLQPQLFKEFNQILKSDRMNHAYLFSGDFASFDFALYLAKSRFCENLQDGLPCGEC RECQLIAENEFSDVKIVKPSGQVIKTDTIRELMRDFSRSGFEGKSQVFIIQDCEKMHVNA ANSLLKFIEEPQSSSYMILLTSDENKVLPTIKSRTQIFRFPKNKPLLIEQAEKAGVLKTQ AEILAELAKTPKHLDELMQDKKILDVIQTCERFVTVLFKEKMLAYLETGRLVQVALEKFD QELVFQLLPLFLAKQFNQKESLVYLEKSYKAQQMWKSNVSFQNALEYMVIS >gi|304425798|gb|AEEM01000018.1| GENE 93 91156 - 91791 778 211 aa, chain - ## HITS:1 COG:SPy0399 KEGG:ns NR:ns ## COG: SPy0399 COG0125 # Protein_GI_number: 15674539 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 207 1 209 211 265 69.0 5e-71 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL NDFVTDGRKPDLTLYFDVESEIGLARIAKNAEREVNRLDLEKLDMHKRVREGYLALAEQE KRIVTIDASRELADVVSETLHTILEQLAKNE >gi|304425798|gb|AEEM01000018.1| GENE 94 91978 - 92637 987 219 aa, chain - ## HITS:1 COG:SP0754 KEGG:ns NR:ns ## COG: SP0754 COG0517 # Protein_GI_number: 15900649 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Streptococcus pneumoniae TIGR4 # 1 218 1 218 218 276 70.0 2e-74 MAVKDFMTKKVVYVSPDTTVAHAADMMREQGLRRLPVIENDKLVGIVTERTMAEASPSKA TTLSIYEMNYLLNKTKIRDVMIRDVVTVSPYASLEDAIYTMMKNRVGIVPVVESGQVYGV ITDKDVFKAFLEISGYGEEGIRVAISADDTVGTLAKIVDTISNDNLNIKRTVVATRKSGK VAIEIQIDGKADVADLREKLLNQGIQVDAIELTEAKSLD >gi|304425798|gb|AEEM01000018.1| GENE 95 92811 - 93515 289 234 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 231 245 115 27 1e-24 MLKVDNLSVHYGVIQAVKDVSFEVNEGEVVTLIGANGAGKTSILRTISGLVRPSAGKIEF LGQEIQKEPARKIVASGLSQVPEGRHVFPGLTVLENLELGAFLRNDREENQKNLKKVFDR FPRLEERKSQDAATLSGGEQQMLAMGRALMSQPKLLLLDEPSMGLAPIFIQEIFDIIQDI QKQGTTVLLIEQNANKALAIADRGYVLETGKIVLSGTGKELLESEEVRKAYLGG >gi|304425798|gb|AEEM01000018.1| GENE 96 93521 - 94285 287 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 242 1 229 245 115 25 2e-24 MALLDVKNLTKNFGGLTAVGDVTMHLNEGELVGLIGPNGAGKTTLFNLLTGVYEPSEGSV SLDGTLLNSKKPYKIASLGLSRTFQNIRLFKDMTVLENVLVGMANQNKSHVFASFLRLPK FYQSEEELRQKAMDLLAIFNLDGDADTLAKNLPYGQQRRLEIVRALATEPKILFLDEPAA GMNPQETAELTQLIRQIKEEFDITIMLIEHDMSLVMEVTERIYVLEYGRLIAHGTPDEIK NNQRVIEAYLGGEG >gi|304425798|gb|AEEM01000018.1| GENE 97 94285 - 95238 1486 317 aa, chain - ## HITS:1 COG:SP0751 KEGG:ns NR:ns ## COG: SP0751 COG4177 # Protein_GI_number: 15900646 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 313 1 313 318 308 63.0 9e-84 MKKNLKINLSWLALIVVLFGILEFLATTNILNLYYIQILMGIGISILMGLGTNLVLGFSG QFTLGQAGFMAIGAYATAIITQQNPTYGGFYFSMLVGIVIAVLVALVFGIPTLRLKGDYL AIATLGMAEIIRIVIVNGGDLTNGAAGLTGILPYTTWPVIFIFVVAITILILNFLRSSIG RQVISVREDEIAAEAMGVNVTRMKVLIFVMGAIISAIAGSLYVGYIGTVVPKDFTIMKSI DYLIIAVLGGLGSITGTILAAIVLGILNMFLQNVSNLRMIIYSLALILVMIFRPGGLLGT KEFTLSRFFNKTKGGNH >gi|304425798|gb|AEEM01000018.1| GENE 98 95242 - 96126 957 294 aa, chain - ## HITS:1 COG:SP0750 KEGG:ns NR:ns ## COG: SP0750 COG0559 # Protein_GI_number: 15900645 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Streptococcus pneumoniae TIGR4 # 8 294 3 289 289 355 79.0 6e-98 MFLEQLPQQLVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMLGAFIGYYAISSLH MNFWIALIFTMIATACLGMIIEFLAYRPLRHSTRIAALITAIGVSFFLEYGMVFLVGANT RSFPQAIDIVSYKIGSVTVTNIQLLILIVSLVLMVALQLIVKKTKMGKAMRAVSVDSDAA ELMGINVNSTISFTFALGSALAGAAGVLIGLYYNSIEPLMGMTPGIKAFVAAVLGGIGII PGAALGGFVIGILETLSISLNLSSYRDAIVYGVLIIILLVRPAGILGKNVKEKV >gi|304425798|gb|AEEM01000018.1| GENE 99 96178 - 97359 1621 393 aa, chain - ## HITS:1 COG:SP0749 KEGG:ns NR:ns ## COG: SP0749 COG0683 # Protein_GI_number: 15900644 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 388 1 385 386 347 54.0 2e-95 MHKKIALTALTFLASIALAACSKSPDVTANATGTTIGDTLKIGVNLELTGAVAAYGNAEN DGIKLAVEEINKAGGVDGKKIELVTKDNKSENAEASTAATNLAIQSQVNAMIGPATSGAV SAASLNAQKTGVPLLTPSGTQDDLTVDSDGVKKYVFRTTFQDSFQGQVLAQYAYSNLNAK KVVLYYDNSSDYAKGIAEEFQEKYQGEIVATATFASGDKDFQSALTKFKNLDYDAIVMPG YYTETGIITKQARDMGIEVPILGPDGFNDDSFADLAGTANTHDVYYVSGYSTKTALSDKA TEFIAAYKEKYGSEPNMFAALAYDSVYMIAKAAEGAETSIDIANNLANLTDFEGVTGTMT IDEDHNPIKTALMVKMKDGVEDSAEAVEITGDN >gi|304425798|gb|AEEM01000018.1| GENE 100 97472 - 97723 305 83 aa, chain - ## HITS:1 COG:SPy0397 KEGG:ns NR:ns ## COG: SPy0397 COG4471 # Protein_GI_number: 15674538 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 82 1 82 91 87 56.0 5e-18 MFKKQERQGIIVYLYYNRDARKLNKYGDVLYHSRKMRYQVLYVNKEEAEDIAKEISELKF VKEVSLSQFDNIDKNFVGNLARF >gi|304425798|gb|AEEM01000018.1| GENE 101 97716 - 98159 341 147 aa, chain - ## HITS:1 COG:L162952 KEGG:ns NR:ns ## COG: L162952 COG3679 # Protein_GI_number: 15672339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 136 1 124 126 82 36.0 2e-16 MLTIDEQLFDIDEAIDEVVASFLELESVKDYRKAREVFLADTMLQEKIMHFQALKQSYED AKPYAAFRPEVAEMRHQLFKEKRAIDINEKVSQLRQSEVAVQKILAELSQKISSAISSDI FVDTGLPLAPHKSHHGNCSKGGRKKHV >gi|304425798|gb|AEEM01000018.1| GENE 102 98256 - 98846 929 196 aa, chain - ## HITS:1 COG:SP0746 KEGG:ns NR:ns ## COG: SP0746 COG0740 # Protein_GI_number: 15900641 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Streptococcus pneumoniae TIGR4 # 1 196 1 196 196 331 94.0 7e-91 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI HQPMGGTGGGTQQTDMAIAAEHLLKTRQNLEQILADNSGQTLEKVHADAERDNWMSAQET LEYGFIDEIMVNNELN >gi|304425798|gb|AEEM01000018.1| GENE 103 98978 - 99871 845 297 aa, chain - ## HITS:1 COG:FN0674 KEGG:ns NR:ns ## COG: FN0674 COG0697 # Protein_GI_number: 19704009 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 17 281 18 281 282 109 30.0 5e-24 MIQKHAKLFSATVPLAWGMSYLFVALGASEIPAIELVSLRCGLAFVALVLLFFRHLQKTF SWKMMIYSAFAGLLLFAVFYGLVVGVVDTSASTAGFLASTTVVIVPIIQAMMTRKIPDLK TIVAILIVLSGLFLLTGADLSQFNFGAIMCLMAAALYAIYIILSKYFVERVDAMSLGIWQ LGFASLYALVGTFALERPVLPHSGTVWAAVLGLALICSAYGWVMQTIVQAYVSAEFTSFM FSLEPIFTAFFALLFFGEWLSGLAYLGTILIFIGVLLVSYQPKKDKQSILLQEKVNY >gi|304425798|gb|AEEM01000018.1| GENE 104 99984 - 100853 865 289 aa, chain + ## HITS:1 COG:BH2117 KEGG:ns NR:ns ## COG: BH2117 COG0583 # Protein_GI_number: 15614680 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 2 279 3 280 290 140 30.0 2e-33 MVSKYAIFCSVIELGSFTKTAKQLNYSQSAVSQTIKNLEEEIGTRLLTRGNEGIKLTKDG QTLYPYFQQIVQGEKQLTKKIKELQGLDKAEIRIGIFTSASRNFILPFIKAFKANYPSVN FVLKQGEYTSIYQWLETGQVDLGFTHMDYVGQLQSQILYQDSLYAVLPSKHPLAQQSEIS LADLAQTELILLDEGDHSLTRTAFAKENIVPTFTYEIYDDYTILEIIRQGLGVSLLYENF LDGLSLEDLAVRQISENPFRTVVLAWKNWQTLPLAAQQFAKNISSTIHD >gi|304425798|gb|AEEM01000018.1| GENE 105 100919 - 101548 1013 209 aa, chain - ## HITS:1 COG:SP0745 KEGG:ns NR:ns ## COG: SP0745 COG0035 # Protein_GI_number: 15900640 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 209 1 209 209 377 92.0 1e-105 MGKFQVISHPLIQHKLSILRRTTTSTKDFRELVNEIAMLMGYEVLRDLPLEDVEIETPIT KTTQKQLAGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRDEETLQPVEYLVKLPE DIDQRQIFVVDPMLATGGSAILAVDSLKKRGAANIKFVCLVSAPEGVKALQEAHPDIDIY TATLDEKLNEHGYIVPGLGDAGDRLFGTK >gi|304425798|gb|AEEM01000018.1| GENE 106 101706 - 102869 897 387 aa, chain - ## HITS:1 COG:SP1524 KEGG:ns NR:ns ## COG: SP1524 COG1168 # Protein_GI_number: 15901370 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Streptococcus pneumoniae TIGR4 # 1 387 1 387 388 497 59.0 1e-140 MGTYDFTTRPNRLTHFTYKWQTSENDPDLLQLWVADMDFLPVPEIKEAIIDYGQEHIFGY NYFKDSLYQSVIDWERNEHGYNITKDDISFIDGVVPAISVAIQAFTEKGDAVLINSPVYY PFARTIRLNDRKLVENSLVIKNGHFEIDFDQLEKDIVDNQVKLYVFCSPHNPGGRIWSAQ ELQKIGVLCEKHGVILVSDEIHQDLALFGNKHHSFNTVDDRFKEFTLILSSATKTFNIAG TKNSFAIIQNPKLRKQFKRVQLANNQHEVPTLGMITTETAFTYGKPWLEELKKVIEENIN YVVDYFEENTKIKVMKPEGTYLVWLDFSAYGIEQPQLDEKLQKEAKVVLNDGAHFGKEGK NFARLNVAAPLETIKEASKRIASVFGK >gi|304425798|gb|AEEM01000018.1| GENE 107 102871 - 103965 1086 364 aa, chain - ## HITS:1 COG:SP1525 KEGG:ns NR:ns ## COG: SP1525 COG0626 # Protein_GI_number: 15901371 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Streptococcus pneumoniae TIGR4 # 1 364 1 364 364 555 75.0 1e-158 MKSDCRLATILAHAGIKSDEATGALAAPIHFSTTYQHPEFGKSTGFDYTRTKNPTRATLE KTLAAIEKADYALATSSGMSAIVLAFEIFPVGAKVVAARDLYGGSFRWFNDKEKEGRFSF EYTNTEAELLAAISDDTDIVYIETPTNPLMVEFDIEKVANAAHAKGAKLIVDNTFYSPIY QNPIPLGADIVVHSATKYLAGHNDVLAGVVITNDKETYDKLFYNLNTTGPTLSPFDSYML MRGLKTLKLRMEKSTENARDIVAFLEKLPAVKEVLYTGKGGMISFRVVDESKIPDIINSL DIITFAESLGGVESLITYPRTQTHADIPEEVRLSYGLTNDLLRLSIGIEDVEDLIDDLKH ALEA >gi|304425798|gb|AEEM01000018.1| GENE 108 104264 - 105898 1661 544 aa, chain - ## HITS:1 COG:SPy0390 KEGG:ns NR:ns ## COG: SPy0390 COG2244 # Protein_GI_number: 15674534 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Streptococcus pyogenes M1 GAS # 1 541 1 541 544 569 60.0 1e-162 MSENKTNMTQQQQMVRGAAWLTASNFISRLLGAFYIIPWYAWMGTHGEQANALFGMGYNI YAVFLLISTAGIPVAIAKQVSKYNTLGQEDTSYYLLRKILRLTLVLGLIFAAIMYIGSPI LAAWSGGGADLVRVMKSLSWALLLFPSMSVLRGFFQGFNNLKPYAMSQIAEQIIRVIWML LTAFMIMKIGSGDYVSAVVQSTFAAFIGMIASVLVLLFFLWREGKLQAIFSAGNNDVDID ANAIIIETIKEAIPFIITGAAIQLFQIVDQLSFINTMKLFTSHTTKELQILYAYLSSNPN KVTMILISLATAIGGAGIPLLTENFVNKDKKAAAHLVINSLQMLCMVLFPAMLGAIILAQ PVYTLFYGAPNSTALWLFVGALVQVIFLALYSLLAPMLQALFENRKAIRYFGYGLIIKIV LQIPFIYFFHAYGPLLSTAIGLTIPIILMYKRIHEVTRFNRKALWRGILLVSILTVIMGV IVAIATVGLHFIVSPTTRVGSVVYIVLVGALGVLVYGFLALVTRLLDKLIGGRAKALRQK LHLE >gi|304425798|gb|AEEM01000018.1| GENE 109 105995 - 107446 1740 483 aa, chain + ## HITS:1 COG:SPy0388 KEGG:ns NR:ns ## COG: SPy0388 COG0769 # Protein_GI_number: 15674533 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 1 482 1 481 481 715 73.0 0 MITLEKTLDILKNDHNFREIIFHNHYSLDWKENPSFSKISFDSREADKSTLFFAKGATFK KEYLEQAIENGLTFYVSQVDYELDIPAIIVTDIKKAMSLIAMEFYGHPENDLKIIAFTGT KGKTTAAYFAYNILKQSHRPAMFSTMNTTLDGKTFFKSKLTTPESLDLFKMMATAVQNGM THLIMEVSSQAYLVERVYGLTFDVGAFLNISPDHIGPIEHPTFEDYFYHKRLLMANSKAV VVNAGMDYFNVVAQQVANTPHDFYGKDSDNTIENGRAFDFDVTGKLAGHYDIQLIGSFNQ ENAVAAGLACLRLGTSLADIQKGIAQTSVPGRMEVITQTNGAKVFVDYAHNGDSLEKLLS VVEEHQKGDLHLILGATGNKGESRRADFARVINAHPNLHVILTADDPNYEDPQAIAEEIA SQVTRPLDIQVDREKAISQAMARTNNETDAVIIAGKGADAYQIVNGERTVYAGDLNIAKN YLN >gi|304425798|gb|AEEM01000018.1| GENE 110 107623 - 108405 216 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 4 229 279 509 563 87 27 3e-16 MSDIYAENISVAYDDKVIINDLSVTIAKQKITTIIGANGCGKSTLLKALTRIHALKAGQV FVDGEAIAHLPTKEIAKKLALLPQMLEATEGISVYELVSYGRFPHQNYLGSLSDTDKEKI NWAMEITKVVEFANEKVDSLSGGQRQRVWIAMALAQDTDTIFLDEPTTYLDMNHQLEILE LLQKLNQDTQKTIIMVLHDLNLSARFSDELIAMKAGAIKYHGKVQDIMTADILRDIFYIE AHIVQDPIHNRPILLTYQLT >gi|304425798|gb|AEEM01000018.1| GENE 111 108427 - 109359 1199 310 aa, chain + ## HITS:1 COG:SPy0385 KEGG:ns NR:ns ## COG: SPy0385 COG0614 # Protein_GI_number: 15674531 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Streptococcus pyogenes M1 GAS # 19 305 19 305 310 266 45.0 5e-71 MKKFFAVLTTFLATFLLVACHNTSSTSDDTELSSMPKITGFSYEGDIPKNPQKVINFAYS YTGYLLELGVNVSSYSLDLEKNSPAFGDQLADAVQLTSDDTEAIAAQKPDLIIAFSTDEN LDDLKAIAPVLVIEYGKSDYLEMMTNLGKVFDKEDEAQEWLDNWETKTAEAKEELSQYID SSTTFTVMDFYDKDIYLYGNNWGRGGELIYDSLGYAAPQKVQDDVFPAGWFGISQEVLGD YVGDYVVLNVSDDTKEAAASLKESDVWNNISAVKNNHVLEVDESLFYFSDPMSLDKQLDA FVSAIKQANS >gi|304425798|gb|AEEM01000018.1| GENE 112 109437 - 110459 962 340 aa, chain + ## HITS:1 COG:SPy0384 KEGG:ns NR:ns ## COG: SPy0384 COG0609 # Protein_GI_number: 15674530 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 17 299 21 302 306 258 54.0 1e-68 MKQLYLLFQKNKRLRAWLLFFSLCFLFILGWYLSLRFGAVAYSNAQLMSVFRHPLTDSNL QDVIFDLRLPRTIAAILVGAAMAQAGSIIQGVTRNPIADPGLLGINAGAGLALIVGYAIF GSMHYSLILIICLFGAILAAILVFGIAYHPRKGYQQLRLILAGAMISTLFSSLGQAITLY FDLSKAVIGWQSGGLAQINWKMLGIIAPFIILGLLLAQLFARQLTILSLDETVAKALGQR TFAMTMTFLAIVVILSAAAVALVGSIAFVGLIIPHFVKMFVAKDYRIILPLTAFAGSTFM LWVDLICRTINPPAETPVSAIVSIVGLPCFLWLVRKGENL >gi|304425798|gb|AEEM01000018.1| GENE 113 110603 - 111457 823 284 aa, chain + ## HITS:1 COG:SPy0383 KEGG:ns NR:ns ## COG: SPy0383 COG0609 # Protein_GI_number: 15674529 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 283 62 344 345 247 55.0 2e-65 MSFIVTQIRLPRILACMLGGGSLAMSGVLLQTLTKNPLADSGILGINAGAGLVIAIMVGL LDVTNSMMIALMPFLAMLGGILTICTVYFVSRQKNQPISPTRLIITGVGISSLLSGIMIS IIANLDTSKTDYIVSWLSGKVSGGNWQTLMILAPLLLVTWLLTYSQSYALNIMSLNEETA IALGLNLKRERLYTLILSTALAALSVVLVGNITFIGLLAGHITRQLLGSDHRISLPSSLL IGMIIFLIADTIGRVFLVGTGIPTGLVVAVIGAPYFLYLMIKTT >gi|304425798|gb|AEEM01000018.1| GENE 114 111578 - 112234 824 218 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1775 NR:ns ## KEGG: GALLO_1775 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 218 1 218 218 371 98.0 1e-101 MINIFNPDKLTRQAFFQDLINFLYQTDDVTLRQIKANFPEVPKIDRLIEEYVQAGYIIRD NKRYTIGFELLDSLENVSLDSQLFVDDQSAIYEDLMALTFETRLTNEANDLVLVEKTSIA RSELTLSNYFFKLADNLPMSKAQEPLYDLLGDVNPQYALKYMTTFLLKFGRKDEVAQKRL DIFVETLEKLDYIRKNDQGKYKLNMLFDKENLIFTSKA >gi|304425798|gb|AEEM01000018.1| GENE 115 112227 - 112742 331 171 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1776 NR:ns ## KEGG: GALLO_1776 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 171 1 171 171 322 98.0 4e-87 MNIQELRAGDLLFMYGISDMSQAIQKATGQYSHVAIYFDSMIYHATKDKGVIKQQLREFL KTKQHRIFVYRYPRIKAEQVQAAAEHLLGRPYNHSFYPDNGSYYCSQYIADILPIFETIP MQFGDDKHTIFEFWQQYYDELGVAVPLNQSGTNPSQLAQSEHLQYLGELHD >gi|304425798|gb|AEEM01000018.1| GENE 116 112852 - 113583 491 243 aa, chain + ## HITS:1 COG:SP1547 KEGG:ns NR:ns ## COG: SP1547 COG3022 # Protein_GI_number: 15901390 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 241 1 241 242 226 48.0 3e-59 MKILIPNAKELHTNQDAFPSQPLSAKSQAVLKALQKYSVESLANFYKINSSKADQEWTRW QRLADKQAKTYPAWLLYDGLMYRYMKRTQVTEAERHYFDNHLRITTALYGLISPMTLIAP HRLDFQGNLKIDNTSLKQFWRQQYDEEVQDDELIISLLSSEFEQVFSPNIRKRMVKIVFM ENRNGKPKVHSTISKKGRGRLVSLMAEKQIETIEQIKHLTFDGFRFSPELSQDQTLTFIR EQE >gi|304425798|gb|AEEM01000018.1| GENE 117 113661 - 113804 177 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDEKILYHKKGKHWEFTLSKTSKREKVEGVIGLLVLIALIAYFLMK >gi|304425798|gb|AEEM01000018.1| GENE 118 113869 - 114801 1289 310 aa, chain - ## HITS:1 COG:SP1534 KEGG:ns NR:ns ## COG: SP1534 COG1227 # Protein_GI_number: 15901378 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 310 1 311 311 483 85.0 1e-136 MSKILVFGHQNPDSDAIGSSVAYAYLKRELGVDAEAVALGTPNEETTFALNYFGVEAPRV VESAKAEGADQVILTDHNEFQQSISDIRDVEVIEVVDHHRVANFETANPLYMRLEPVGSA SSIVYRLYKENNVVIPKEMAGLLLSGLISDTLLLKSPTTHATDPAVAADLAEIAGVNLEE YGLALLKAGTNLATKSAEELIDIDAKTFELNGNQVRVAQVNTVDINEVLERQAEIEAAIT AANTANGYSDFVLMITDILNSNSEILALGSNIDKVEAAFNFKLENNHAFLAGAVSRKKQV VPQLTESFNA >gi|304425798|gb|AEEM01000018.1| GENE 119 114951 - 115598 637 215 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1780 NR:ns ## KEGG: GALLO_1780 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 215 1 215 215 333 99.0 2e-90 MNSYKVLKFDDEFVYLTQDGKIKKLARDLFDFDIKLGDRVDYIQDGDIILVLPNQDEAAL DLNDDKSVKSGLLQGILNLFLETLSIHNNDLGNLKKIFSQLLVTLFMAWSLLGVIAIEIL LLIESLITFIWRLLVKGVKGLHIVDNSRKYMAYRKEQEAIRNQENREEEERLLRLALEQE KTAKAEAAKDDSSDNETPDVKETNNDSTQNTTEKD >gi|304425798|gb|AEEM01000018.1| GENE 120 115653 - 116441 895 262 aa, chain - ## HITS:1 COG:SPy0379 KEGG:ns NR:ns ## COG: SPy0379 COG1180 # Protein_GI_number: 15674526 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 1 262 1 262 263 468 81.0 1e-132 MTEIDYGKVTGMIHSTESFGSVDGPGIRFVIFMQGCKMRCQYCHNPDTWAMETNQSQERT VDDVLAEALRYKHFWGKNGGITVSGGEAMLQIEFVTALFTKAKELGIHCTLDTCGFAFRD TPEYHEIVDKLLAVTDLVLLDLKEINPKQHIVVTRQPNTNILAFARYLSDKGIPVWIRHV LVPGLTDFDDDLIELGKFVATLKNVDKFEILPYHTLGEFKWHELGIPYTLEGVKPPTKER VQNAKDLMHTESYTEYMKRIHQ >gi|304425798|gb|AEEM01000018.1| GENE 121 116515 - 117846 1488 443 aa, chain - ## HITS:1 COG:SPy0378 KEGG:ns NR:ns ## COG: SPy0378 COG1253 # Protein_GI_number: 15674525 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Streptococcus pyogenes M1 GAS # 1 443 1 444 444 671 81.0 0 MEDPSQNLVLQFVLLLILTLLNAFFSASEMALVSLNRSRVEQKAEEGDKKFIRLLSVLEN PNNFLSTIQVGITFISLLQGASLSASLGSVIASWFGDFVWAQTAGSVISLVFLTYISIVL GELYPKRIAMNLKENLAVISAPVIIFIGKIVSPFVWLLSASTNLLSRITPMQFDDADEKM TRDEIEYMLSNSEETLDAEEIEMLQGVFSLDELMAREVMVPRTDAFMIDINDDTQENIQE ILKQNFSRIPVYDDDKDKIIGVLHTKRLLDAGFRDGFDNIVLRKILQEPLFVPETIFVDD LLRQLRNTQNQMAILLDEYGGVAGIVTLEDLLEEIVGEIDDETDKAEQFVREIGEHTYIV LGTMTLNEFNDYFDVDLESDDVDTIAGYYLTGVGNIPDQDSRETFEVDTKEKHLALTNDK VKDGRVTKLKVIFSDIEQSIEED >gi|304425798|gb|AEEM01000018.1| GENE 122 118056 - 118844 922 262 aa, chain + ## HITS:1 COG:L44550 KEGG:ns NR:ns ## COG: L44550 COG1119 # Protein_GI_number: 15673204 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Lactococcus lactis # 1 246 19 264 277 281 58.0 1e-75 MLQVKLKNVSLERQHKLLLKNLNWEVNKGEHWAILGLNGSGKTTLLKLIMAEYWKTDGEV EVLGTPFGGTDISDIRTKIGIVGSFIAERLPANMLAEKIVLTGKYKSSILYKEYGKKELD EARQMLISIGGEHLLGRIYASLSQGEKQLLLIARSLMENPEILILDEATSGLDLFAREKL LTQIEQITSLPNAPTILYVTHHAEEITQSMTHVLLLKKGEIIAQGPKNDVLTEDILTDFY DQTVSIIPLGDERIYIKPEFKS >gi|304425798|gb|AEEM01000018.1| GENE 123 118879 - 120903 1784 674 aa, chain - ## HITS:1 COG:L187315 KEGG:ns NR:ns ## COG: L187315 COG0025 # Protein_GI_number: 15672365 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Lactococcus lactis # 1 671 14 673 680 484 42.0 1e-136 MLIVSNVINRLYPKLPLPFIQIVLGILVGVLAKETTLTLNSELFLALVIAPLNFREGQES DVTTFVKYKSIVAYLILPTVLITMLTVGYVTGKLLPVDVPLAASFALGAALAPTDAVAFL SIAKRFKFPKRVESILTIEGLLNDASGLISFQFAVTALTTGAFSLLTASFSLFWAIIGGM LVGLFFALLNRGVMAFLEKIDVADVTGALLLELSLPIVSYFVASLFGVSGIIAVVIAGLS QASRFKRIRLFDAEVDRVSQIIWETVSFILNGFVFIVFGYELTRIVEPALTNPLVNNYRL VTIVLIVTALLFLVRFVMVGLYYILHYRKGKRSSKSLLREVLLLTFSGVKGTVSIATILL LPQFESYAYSLILFTVAAVTLLSFLIGVFVLPNLAQSSDDTDTTDYVTQIAILNEVVKTL EQDLKEVEDKGPLYAAIDNYNGRIEHLILEQEPTIVKKELAYLRLMILGIESDGLEHAFS EGKIELVEYRLYQRYLQNLERQINRGFISTFSYFFTISMRVIRRLVRESFSFWPTIRHFL SGKSREIKLTEDNRDRLTELYLSNTELVLEGLQDLEGIYNSELIGFLQRSRLQEANIIES GVFVERVIAHMKPDNIDEMLRGYYLERKVIAEYEMRGDITSSYATFLRRNVNKLESYSLK DDYGTLPYNYFIIK >gi|304425798|gb|AEEM01000018.1| GENE 124 120953 - 121207 335 84 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1786 NR:ns ## KEGG: GALLO_1786 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 84 1 84 84 102 98.0 3e-21 MQTVTVREKLHKMHQKYLDDANTKPCAKLSEEDAEKILTIKKKLASLEKERCVRLRDRKD VTAIDQKIAKQKERFTVYCRQKQR >gi|304425798|gb|AEEM01000018.1| GENE 125 121213 - 121776 704 187 aa, chain - ## HITS:1 COG:SPy0377 KEGG:ns NR:ns ## COG: SPy0377 COG0500 # Protein_GI_number: 15674524 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 181 1 181 184 247 69.0 9e-66 MIKRPLHLSHDFLAEVLDEQAIAVDATMGNGNDTAFLAQHAKEVYAFDVQEQALQSTKER LEKQEIHNAHLILDGHQHIDHYVNQPIRAAIFNLGYLPSADKTVITKPDTTLIAVEKILE KLEVGGRLAIMIYYGHEGGDMEKDAVLEYVNQLDQRLFTAMLYQPLNQINQPPFLVMIEK LKQSKES >gi|304425798|gb|AEEM01000018.1| GENE 126 121773 - 122714 949 313 aa, chain - ## HITS:1 COG:SPy0376 KEGG:ns NR:ns ## COG: SPy0376 COG1242 # Protein_GI_number: 15674523 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Streptococcus pyogenes M1 GAS # 1 307 1 306 306 571 85.0 1e-163 MKKRYNTLNDYYRQIFGEKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPDA PIRDQFYKEIDFMHRKWPDVKKYLVYFQNFTNTHDTVDVIRERYEQAINEPGVVGINIGT RPDCLPDETIAYIAELSDRMHVTVELGLQTTYDETSKIINRAHTYDLYVETVKRLRQLAP KVEIVSHLINGLPGETHDMMIENVRRCVTDNEIDGIKLHLLHLMTSTKMQRDYHEGRLKL LGMEEYVNIICDQLEIIPKNIIIHRITGDAPRDMLIGPMWSLKKWEVLNAIDKEMERRGS YQGCKLENKEVVL >gi|304425798|gb|AEEM01000018.1| GENE 127 122836 - 123492 690 218 aa, chain - ## HITS:1 COG:SP0489 KEGG:ns NR:ns ## COG: SP0489 COG0671 # Protein_GI_number: 15900403 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 218 1 216 216 163 42.0 3e-40 MKHKQNYLVGASFFLVIFMMLGYLVKFFPETLAGIDSSIQTSVRGDLPANATAFFKIVTN FGHEVFIFVYVFAIAFVFYFWKKWKAEAILLAGNLVLMGIFSTGFKYLYNRPRPSIQYLI PKPMGPSFPSWHAAATMVVALSLVVIMEQHLTKTTLKRCLQVLVVVIALTTALSRIYLGV HYPSDILGGWLLAFAIAAATYPFYDKKRFEWRFQGKQE >gi|304425798|gb|AEEM01000018.1| GENE 128 123614 - 124027 400 137 aa, chain - ## HITS:1 COG:alr2616 KEGG:ns NR:ns ## COG: alr2616 COG2510 # Protein_GI_number: 17230108 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Nostoc sp. PCC 7120 # 3 136 9 142 143 110 55.0 1e-24 MWVLFAILSAVFAALTSILAKIGISGVNPNLATAIRTVVVVFMAWGIVFITNAQSGIGDI SRKSWLFLILSGLATGASWLFYYRALQMGDASKVASIDKLSVVITLILAFIFLNEQLTLK SILGCLLIVVGSLLMIL >gi|304425798|gb|AEEM01000018.1| GENE 129 124116 - 124685 656 189 aa, chain - ## HITS:1 COG:SP0488 KEGG:ns NR:ns ## COG: SP0488 COG3601 # Protein_GI_number: 15900402 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 187 1 183 187 180 66.0 2e-45 MPETMTNTRKIAHIAILSTLSFLLMYLQFPLIPSASFLQFDFSVLPVLVGLVMFDLKSAL GILILRTLLKLLLNNGGISTIIGLPMNVVALGVFVVALAILWNQKPSLKNYLLASVVGTL GLTVAMFVLNYVYAVPLYAKFANFDISAILGLGNYLFAMVIPFNLIEGIIFSVTFFILYS CLKPILKID >gi|304425798|gb|AEEM01000018.1| GENE 130 125116 - 125661 582 181 aa, chain - ## HITS:1 COG:SPy0371 KEGG:ns NR:ns ## COG: SPy0371 COG0219 # Protein_GI_number: 15674520 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Streptococcus pyogenes M1 GAS # 4 181 5 182 182 277 74.0 6e-75 MNIEELDYHEEPNKAMNHIVLFQPQIPQNTGNIARTCAATNAPLHIIRPMGFPIDDRKMK RAGLDYWDKLDVTFYDSLDEFMEKCDGEVHLISKFANKVYSDENYNDGKHHYFLFGREDK GLPEEFMRANPEKALRIPMNDEHVRSLNLSNTVCMIVYEALRQQAFPNLELSHTYAHDKL K >gi|304425798|gb|AEEM01000018.1| GENE 131 126063 - 126818 659 251 aa, chain - ## HITS:1 COG:CAP0001 KEGG:ns NR:ns ## COG: CAP0001 COG0300 # Protein_GI_number: 15004706 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Clostridium acetobutylicum # 7 251 6 250 251 293 62.0 2e-79 MEILKDYTCITGASSGIGAETAKQFAKLGSNLILVARRQEKLEELRETILSHFPELDVII KVVDLSKSHNVFKLYEDLKSYHIKTWINNAGFGNYDSVEHQNLKKVLEMLHLNIEALTIL SSLYVRDYKDCEGAQLINVSSRGGYMMVPDAVTYCASKFYVSSFTEGLALELRENHNLLR AKVLAPAATKTEFGQIATDSDKYDYDEAFSKYHTSEEMAQFLIKLYQSNQTVGLVDVKTF EFHLSEPLFNH >gi|304425798|gb|AEEM01000018.1| GENE 132 127019 - 127381 351 120 aa, chain + ## HITS:1 COG:lin0806 KEGG:ns NR:ns ## COG: lin0806 COG0789 # Protein_GI_number: 16799880 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 3 114 2 113 123 105 54.0 3e-23 MTHYSIGEFAKKTGLPISTLRYYEQEKLIYSHREKNNRRYYKESDIAWTQFIIRLKKTGM SIKNMQEYAKLRYQGDSTIPKRLELLFLQLDELHSQQSEINQHINFLENKIKTYLGIKTD >gi|304425798|gb|AEEM01000018.1| GENE 133 127824 - 129671 2048 615 aa, chain - ## HITS:1 COG:lin2235 KEGG:ns NR:ns ## COG: lin2235 COG0531 # Protein_GI_number: 16801300 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Listeria innocua # 1 615 1 607 607 602 52.0 1e-172 MLEKLRNVFIGNPLKSAGESDEEHLLSKSQALAMLSSDALSSIAYGPEQVILVLTTISAA AIWWSLPIGLLVLVLLASLTISYQQVIHAYPKGGGAYMVSTENLSPSMGLIAGGSLLVDY MLTVAVSVSSGADAITSAFPAIKEFNLEISIVLVLILMFMNLRGLRESATSLMIPVYLFI VSILFLIGYGGIQIATGHLAYSATAHVGKVVPGVSLILLLRAFTSGSASLTGVEAISNAV PFFKKPKEKNAAGTLAIMSIILGVMFAGITFLNYWLGIMPSAHVTVLAQIAQKIFGDSAI GNALFYIFQLSTALILAVAANTGFSAFPMLSFNMAKNKYMPHLFMEKGARLGYSNGIITL AVGAIILLCIFNGSTERLIPLYTIGVFIPFALSQTGMVIHWKRKFGKRYLKHSVANILGA IICYLIILILLIFRIGEIWPFFPIIVVLMILFYSIKSHYNNVAMQLRLTDDVKNIHYDGN TVLILVGNITQASIRAINYAKSIGQTVVAMHVSTLETREKDLEIEQEFKTYFPDVTFVNI ESNYRDIVKPTMSFVQKMNQEAKKNNHTMTVIIPKFIPKHSWQNVLHNQMSLRLRARLRW YEDIIIATYSYHLKK >gi|304425798|gb|AEEM01000018.1| GENE 134 129929 - 131278 1255 449 aa, chain + ## HITS:1 COG:SP0480 KEGG:ns NR:ns ## COG: SP0480 COG0569 # Protein_GI_number: 15900395 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 449 449 635 71.0 0 MKIIVVGGGKVGTALCRSLVEEKHDVVLIEEKESVLKNITKRQDIMGIVGNGANFKILEQ ADVSNCDIFIALTAKDEVNMISAVLAKKMGAKETVVRVRNPEYSNAYFKDKDFLGFSLVV NPELLTARYIANSVDFPNALSVEHFVNGRVMLMEFMIADGSKLCQMTLSQFRKKFGNIVI CAIERQGKLIIPDGDAVLKTGDKIFVTGNRVEMILFHNFVKTKIIKNLMIIGAGRIAYYL LNILKHTRINLKVIENNQERAELFSQEFPDVHVVQGDGTAKSVLLEESVENFDAVATLTG VDEENIITSMFLETLGVQKNITKVNRTSLLEIIDTSQFSSIVTPKSIAVDTMMHFIRGRV NAQDSNLDAMHHIANGRIESLQFEIRESNKMAGKSLSSLKFRDNILIAAIIRKGKTIYPT GEDVLQVGDKIVVVTFLKNITRIYDLLAR >gi|304425798|gb|AEEM01000018.1| GENE 135 131282 - 132721 1095 479 aa, chain + ## HITS:1 COG:SP0479 KEGG:ns NR:ns ## COG: SP0479 COG0168 # Protein_GI_number: 15900394 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Streptococcus pneumoniae TIGR4 # 1 478 1 478 479 542 69.0 1e-154 MNRSMVRYLLSKLLLIEAALLLVPMLVAIIYSEPLRVLNSIGITIGILLILGLLGSAFKP KNYHIYTKEGLLIVALCWILWSFFGALPFVLSGQIPSIIDAFFEMSSGFTTTGATILPDV SVLTHSLLFWRSFAHLIGGMGVLVFALAIMENSKNSHLEVMRAEVPGPVFGKVVSKLKET AQILYIIYLTMFVVLAIILKIAGMPIYDSIVTAMGCAGTGGFAVYNDSIAHYNSSLITNI VSVAVLLFGINFNLYYFLLLRKFKAFFKDEELRTYIGIIVIATALIWLNVGGLYASAGKG LENALFEVANVITTTGFGITDLTVWPLFSQVILLILMVIGGSAGSTAGGLKVMRALILTK ISRNQVLSTLYPNRIMTLHVNHQPLDKETQRGVLKYFSLYITLLVGLILILSLDSNNFMV VVSAAASTFNNIGPMLGTSDTFAIFSPFSKLIMSFAMIAGRLEIYPMLLLFIPRTWSKY >gi|304425798|gb|AEEM01000018.1| GENE 136 132742 - 132948 158 68 aa, chain - ## HITS:1 COG:SPy0370 KEGG:ns NR:ns ## COG: SPy0370 COG0759 # Protein_GI_number: 15674519 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 68 19 86 86 104 69.0 5e-23 MSPPSCRYRPTCSNYMIGAIEKHGLKGVLMGIARILRCHPFVTGGDDPVPDYFTLRRNKD FRTKKEEG >gi|304425798|gb|AEEM01000018.1| GENE 137 133002 - 133727 882 241 aa, chain - ## HITS:1 COG:SPy0369 KEGG:ns NR:ns ## COG: SPy0369 COG1187 # Protein_GI_number: 15674518 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pyogenes M1 GAS # 1 240 1 240 240 403 87.0 1e-112 MRINKYIAHAGVASRRKAEELIKKGLVTINGKVVTELATTVKSGDVVEVEGSPIYNEEKV YYLLNKPRGVISSVSDEKGRKTVVDLLPNVTERIYPVGRLDWDTTGLLILTNDGDFTDEM IHPRNEIDKVYLARVKGIATKENLRPLTRGVVIDGKKTKPARYNIVKVDPEKNRSVVELT IHEGRNHQVKKMFESVGLLVDKLSRTQFGTLDLAGLRPGESRRLNKKEISQLHNLAVNKQ K >gi|304425798|gb|AEEM01000018.1| GENE 138 133809 - 134375 688 188 aa, chain - ## HITS:1 COG:SPy0367 KEGG:ns NR:ns ## COG: SPy0367 COG1386 # Protein_GI_number: 15674517 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Streptococcus pyogenes M1 GAS # 1 179 1 179 183 265 78.0 4e-71 MNYLAQIEALLFVAGEEGLSLRHLASMVNLTPTALQQQLEKLAQKYETDETSSLCLIETA GNYKIVTKEIFADLLREFAKAPVNQSLSRASLEVLSIIAYKQPITRIEVDDIRGVNSSSA ISKLMALGLITEAGKKEVIGRPNLYATTDYFLDFMGINDLSELIDVSNIELVDEEMTLFD NSGLPEEG >gi|304425798|gb|AEEM01000018.1| GENE 139 134431 - 135135 724 234 aa, chain - ## HITS:1 COG:SPy0366 KEGG:ns NR:ns ## COG: SPy0366 COG1354 # Protein_GI_number: 15674516 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 231 1 229 233 271 71.0 1e-72 MDIKLKDFEGPLDLLLHLVSKYQMDIYDVPIVEVIEQYLAYISTLQAMKLEVAGEYMVMA SQLMLIKSRKLLPKVVEAEPEENDPEQELLTQIEEYRRFKAISEELSAQHDERAKFYSKP KQELIFEDAVLTHDKTVMDLFLSFSHVMAEKQKELKNSNTVIERDDYRIEDMMTIIVERL NATKKLVLTTVFRECQTLPEMITIFLATLELIKVHEVEVEQEENFGDIVLRSVS >gi|304425798|gb|AEEM01000018.1| GENE 140 135135 - 135875 264 246 aa, chain - ## HITS:1 COG:SPy0365 KEGG:ns NR:ns ## COG: SPy0365 COG0582 # Protein_GI_number: 15674515 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 1 246 1 247 248 209 46.0 4e-54 MIDFIQDFIDSKPLSENTKNAYFYDLQQFVEAIDGKVSKEKLALYEHSLSPLKASAKKRK ISAVNQFLYFLYETDRLNHFYKLSNKEKITTKPVELALLDYRSFYQETNCQTGQLIALLM IELGLSPSDIQQLKVADFDLTFAVLRVQRAGLVRVLELPEKLLPYVAASSSENQLYLFDN QGKTYSRQWFFNQLKSFLATLDLDYLSAQAIRQQYILHQKAAGKSILEVSRNLGLKSPVT LEKFYK >gi|304425798|gb|AEEM01000018.1| GENE 141 135868 - 136335 520 155 aa, chain - ## HITS:1 COG:SPy0364 KEGG:ns NR:ns ## COG: SPy0364 COG0517 # Protein_GI_number: 15674514 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Streptococcus pyogenes M1 GAS # 1 153 1 153 153 226 76.0 2e-59 MIAKEFEEFLLSHLEHYLIPAEDLAIFIDTHNSDHAMLLLANNGYSRVPVITKDKKYVGT ISIADIMSYQAKNQLTDWELAQTDIGKMVNTKMETISETSNLTDIMHLLVDYPFLPVLDK NDQFLGIITRKSILKAVNSLLHDFTDYYTITPKDD >gi|304425798|gb|AEEM01000018.1| GENE 142 136332 - 136853 489 173 aa, chain - ## HITS:1 COG:SPy0363 KEGG:ns NR:ns ## COG: SPy0363 COG0622 # Protein_GI_number: 15674513 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Streptococcus pyogenes M1 GAS # 1 173 1 173 173 275 72.0 2e-74 MANKTIIVMSDSHGDREIINDIKTKYQGEVDAIFHNGDSELPSSDTIWEGIKVVRGNCDY DNGYPERLITYLGDVVVAQTHGHLYNINFTWDRLDLFAQEADADICLYGHLHRPAAWRNG KTIFINPGSILQPRGDVKEKLYAKVDITDDKIKVNYYTRNHDLFPALSKEFDR >gi|304425798|gb|AEEM01000018.1| GENE 143 136835 - 137851 429 338 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 141 330 4 193 197 169 49 6e-41 MTDKIYEYKDVENWFLGEWGGFNAISGLGNVCDDAVYELSQQLAKLNTSKCCGNCHGDCH SDDRNGYNVTVVKKSSDFQLIRFVADMINQETNRKLEVTQRAGAVIVTEAEQLLLVHLPE NGVEAAAFFGQTSETAFGDTILIATRNEGKTKEFRKMFEKIGIKVENLNDYPDLPEVEET GMTFEENARLKAETISKLTGKMVLADDSGLKVDALGGLPGVWSARFSGPDATDESNNAKL LHELAMVFDHKDRSAQFHTTLVVAAPDKDSLVVEADWPGYIAMEAKGDNGFGYDPLFMVG ETGRHAAELTAEEKNDISHRGLAVKKLMEAFPVWQTKQ >gi|304425798|gb|AEEM01000018.1| GENE 144 137869 - 138678 649 269 aa, chain - ## HITS:1 COG:SP1881 KEGG:ns NR:ns ## COG: SP1881 COG0796 # Protein_GI_number: 15901709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Streptococcus pneumoniae TIGR4 # 1 264 1 264 264 444 79.0 1e-125 MDNRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWELVNF LLTQNVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGSSAAIKSTRNGKIGVIGTPMT IKSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESNEMTSSVAKKVVYETLAPLVGKVDTLV LGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINRSRTQDDVTHAFYTTA SSQSFKEIAVNWLAKDIDVQHVDLKKLNK >gi|304425798|gb|AEEM01000018.1| GENE 145 138851 - 139093 448 80 aa, chain - ## HITS:1 COG:SPy0359 KEGG:ns NR:ns ## COG: SPy0359 COG3763 # Protein_GI_number: 15674510 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 80 1 80 80 116 81.0 8e-27 MTTFLWILLVLVALLGGLVGGVFIARKQFEKEIGEHPRLTPDAIREMMSQMGQKPSEAKI QQTYRNIIKQSKAAAAKAKK >gi|304425798|gb|AEEM01000018.1| GENE 146 139266 - 140510 1332 414 aa, chain - ## HITS:1 COG:SP1978 KEGG:ns NR:ns ## COG: SP1978 COG0019 # Protein_GI_number: 15901801 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 413 1 415 416 660 76.0 0 MKTPFISAEELQKITDAFPTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPA ILKILQEENCGVDCATEVELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEH IAFLKEVAGLPETVSLRYNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKN FGIHSFLASNTVTNDYYPELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPND IAVIGKGVHRVFDEVLIPAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDA SAVNLMRPAMYDAYHHITNVSNPNGKLEVVDVVGSLCENNDKFAKRRELPEARVGDTLVI HDTGAHGFSMGYQYNGRLRSAEILYQEDGSARLIRRAETPEDYFATIKGFDFDN >gi|304425798|gb|AEEM01000018.1| GENE 147 140638 - 141330 879 230 aa, chain - ## HITS:1 COG:SPy0358 KEGG:ns NR:ns ## COG: SPy0358 COG0670 # Protein_GI_number: 15674509 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Streptococcus pyogenes M1 GAS # 3 230 2 229 229 272 71.0 5e-73 MNHNDVIYTQTDSALNRFFAKIYGLVGVGIGLSALVSFLMLYVFTDNMVNIIVYHPFVYY GAIFLELALVFLASNAARKNTPAALPLFLFYSALNGFTLSFVIVAYTQTTVVQAFVSSAL VFGVMAIIGTFVKRDLSGMAKALMAALIGIIIASLVNMFIGSGTMSYIISIISVLIFSGL IAYDNQMIKRVYESTGGNVGDGWAISMALSLYLDFINLFLSLLRIFGSDD >gi|304425798|gb|AEEM01000018.1| GENE 148 141379 - 141882 510 167 aa, chain - ## HITS:1 COG:SPy0357 KEGG:ns NR:ns ## COG: SPy0357 COG1418 # Protein_GI_number: 15674508 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 4 167 3 166 166 242 78.0 2e-64 MEAYKKDKEFMELVGHLIQHPRFQKLDNIPQHHYSTRMEHSINVAYTSYKIAKKFGWDEK STARGGLLHDFFYYDWRETKFNKGHAWVHPRIAVRNARKLTTLNKREEDIILKHMWGATI APPRYKEGYIVTMVDKYWAVKEAITPFRNRFNKRRRYSRKILPSNHR >gi|304425798|gb|AEEM01000018.1| GENE 149 141982 - 142722 214 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 73 246 61 243 255 87 28 5e-16 MTIITSKSNNLIKKTKKLLKKKYRDHSYLIEGWHLFEEAEKAGAEFLNIFVLEDYADRVS HFSMVTYVTPEVLKELTDSKTPQGIIAEVAMPSLPLADLKAGRYLVLEDVQDPGNVGTMI RTADAAGLDGVLISEKSADIYNQKTLRSMQGSHFHLPIWRTDVYEACQKLQNLDVPLIAT TLSKESVDYKTVEHNGDFALVMGNEGNGISELMTKQADILAHIIMPGQAESLNVAVATGI VLFQLI >gi|304425798|gb|AEEM01000018.1| GENE 150 142758 - 143036 434 92 aa, chain + ## HITS:1 COG:SPy0352 KEGG:ns NR:ns ## COG: SPy0352 COG1254 # Protein_GI_number: 15674506 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Streptococcus pyogenes M1 GAS # 1 91 1 91 92 149 80.0 1e-36 MKKVRLIVSGRVQGVGFRYSTYALALELGDIYGRVWNNDDGTVEILAQSEDSAKIAKFIQ EIRKGPSQWSKVTYVDVKIANFEDFTDFRIAN >gi|304425798|gb|AEEM01000018.1| GENE 151 143126 - 144046 971 306 aa, chain + ## HITS:1 COG:SPy0351 KEGG:ns NR:ns ## COG: SPy0351 COG0706 # Protein_GI_number: 15674505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Streptococcus pyogenes M1 GAS # 1 305 1 307 307 416 71.0 1e-116 MKKKLNRVLFSGLSLSLLFLLTGCVSRDSSGNPTGTIWHILGEPMAKLIQYFANNVGLGF GLAIILVTIIVRCIILPLGLYQSWKASYQSEKMAYLKPIFEPINERMRNATTQEEKLAAQ TELMAAQKENGINMLGGMGCLPLLVQMPFFSAMYFAAQYTQGVSESTFLGIDLGTRSIPL TAVIAVLYFFQSWLSMQGVAEEQRAAMKGTMYVMPLMMVFFGMSMPASVLLYWLVGGFFS IIQQLITMFIIKPRLRKKIAVEFEKNPPKTYKSKARKDVTPAANNAQLSNKPKKSNRNAG KQRKRK >gi|304425798|gb|AEEM01000018.1| GENE 152 144137 - 144619 808 160 aa, chain - ## HITS:1 COG:SPy0349 KEGG:ns NR:ns ## COG: SPy0349 COG0782 # Protein_GI_number: 15674504 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Streptococcus pyogenes M1 GAS # 1 159 17 175 176 214 90.0 5e-56 MAEKTYPMTLAEKEQLEQELEELKLVRRPEVVERIKIARSYGDLSENSEYDAAKDEQAFV EGQIQILETKIRYAEIIDSDAVAKDEVAIGKTVTVEEVGTTDKDVYHIVGAAGADIFSGR ISNESPIAQALIGKKTGDIVTIESPAGSYDVKIVSVEKTA >gi|304425798|gb|AEEM01000018.1| GENE 153 144703 - 146406 1773 567 aa, chain - ## HITS:1 COG:SPy0348 KEGG:ns NR:ns ## COG: SPy0348 COG1559 # Protein_GI_number: 15674503 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 565 3 523 524 495 52.0 1e-139 MTEFNDDKPKTQKEKSFKEQILAELEEANRLRKQHDLELQQKEKEAEEFARKTAELMAEY EAEERKERQEAEIREEKRRLEEKAQTALAENQIETTVDDKEINDVLRNINQTFNPNGSDS EDNAENEQESYLVRATDGVGFAGIPDIPDDITSDDSQVADSDMQAEESAANSSAETNTDL EKNVGTKRKRKRQKTDSLARRIALFLITAIIIALLATGFFVYRYVDSAVGALDSTSTEYV TVEIPEGSGNKYIGQILEKAGVIKSATVFNYYTKFKNYSNFQSGYYNLQASMDLEEICKL LKQGGTAEPEEPSLGKILVTEGYTIKQISEAVTKNTADDDSSTPFTADDFLSVVQDESFI SKMVEKYPKLLANLPSADEATYQLEGYLFPATYSYYEDTTMEDLVEQMISTMDSYMSSYY DTISEKGMTVNEVLTLASLVEKEGSTDDDRRNIASVFYNRLNANMALQSNIAILYAMGKL GEETTLSADASIDTSIDSPYNVYTNTGLMPGPVDSPSLSAIEATVNPASTDYYYFVADVN TGTVYYAETYEDHEANVEKYVNSQLDE >gi|304425798|gb|AEEM01000018.1| GENE 154 146504 - 146995 461 163 aa, chain - ## HITS:1 COG:SPy0346 KEGG:ns NR:ns ## COG: SPy0346 COG0454 # Protein_GI_number: 15674502 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 158 2 159 160 187 55.0 8e-48 MIRNVCLEDLQDIIDIERENFSAEEAASLNDMKERILTIPDTFLVAEIDGKICGYVEGPA ICQRYLTDDLFHQVVSNPANGGFIAVTSLSVAPDFKGQGIGMALLATMKDLAIAQKRTGI TLTCHENLISYYERNGFSDEGESESTHGGSSWYNMVWESPMIE >gi|304425798|gb|AEEM01000018.1| GENE 155 147051 - 148382 1494 443 aa, chain - ## HITS:1 COG:SP1521 KEGG:ns NR:ns ## COG: SP1521 COG0773 # Protein_GI_number: 15901367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 443 1 444 444 695 79.0 0 MSKTYHFIGIKGSGMSALALMLHQMGHKVQGSDVSKYYFTQRGLEQAGIKILPFSEDNIT SDVELIAGNAFREDNNVEIAYAVNNGFKFKRYHEFLGDFMRQFTSFGVAGAHGKTSTTGL LSHVLKNITDTSYLIGDGTGRGSANSNYFVFESDEYQRHFMPYHPEYSIITNIDFDHPDY FKSIDDVFDAFNDYAKQVQKALFLYGDDAYLRKITSDADIYYYGFKDTDDFVAYDIVRTT NGSAFKVKHGDEELGSFHLPAFGRHNILNATAVVANLYIAGIDMELVAEHMKTFAGVKRR FTEKVINNTTIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDEFADA LNQADSVYLAPIYGSAREVDHGDVKVEDLASKIQKSAKVISLENVSPLLDHDNAVYVFMG AGDIQMYERSFEELLANLANNTQ >gi|304425798|gb|AEEM01000018.1| GENE 156 148417 - 149013 554 198 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1819 NR:ns ## KEGG: GALLO_1819 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 198 1 198 198 323 100.0 2e-87 MSKTVRRFPLVADGEPVSNPPKAMALYENEDLITNIHGTYHEKDYDDVTRDYNFVGKTEN DAERIKTVSEGKSYAELARDEARRDIKKKRQAYLSNDVKKMPSKATFQQQLKATLPKAPA KPTNKLSHLTEKMHQEDYILAEIPVTYKEPDNSSVPKPKKNNYDFLKRSQIYNKEAQQSQ REHKVAQELNLTRFDDAN >gi|304425798|gb|AEEM01000018.1| GENE 157 149283 - 152363 2563 1026 aa, chain - ## HITS:1 COG:SPy0342 KEGG:ns NR:ns ## COG: SPy0342 COG0553 # Protein_GI_number: 15674499 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Streptococcus pyogenes M1 GAS # 1 1026 5 1030 1032 1368 66.0 0 MIPGRIRNQGIELYEQGLVDIVSKREEVIQAKVGAHHLQYALEDEQVRCDCDLFAKKKYC EHLAALEYFLKNNTEGKELSDELSSHQEIQQETKKVTSFGSVFLDGLVINDDDTTKYRLA AYGSQSPYSSDYWWTLKINRLPDDRAYVVRDIKAFLAVVKSEGYYQIGKNYFEPLSLIQF DEASKDLIQFLWRVLPDSDRVDLEYILPNHGRNLALTSGTFEEGISLLNELYDFSFEHNH QNYGQLVFRPLDGSEGLLSFKVIVHRQSIELVITEKTFQPLFDNAFLFTNGMIYGLNLKQ QKILAAVRSLPIESDLAKHLFFDLDDQAKLAASLLDFKELGVVEAPKSFEIHDFVPSFHL MLNEYQEIALKVTFDYGMVKVSSKRELEDLPFASHFKHEERVFRTLEANGFAASFSSYHA PLANEDLYDFFTNTLEQLERLGKVTLSDDLEEMRQFERPQVSVQTNGGLLDISFDFSTIF ENDIDDALEALFKNQPYFVNDAGKLVVFDEETQRVSNALQNLRAKQLKNGHLQLEAISAF QISDLFQDNDRVTFSKEVEQLAHDLRHPENFEATIPNLNTQLRDYQMTGVRWLSMLDHYG FGGILADDMGLGKTLQTIAFLASKLTPETRILILSPSSLIYNWQDEFNRFAPEIDVVVAY GLKAVRDDIISQNHQVVITSYSSFRQDFDEYSQLNFDYLILDEAQVMKNTQTKIAHYLRQ FEVKNCFALSGTPIENKLLEIWSIFQIVLPGLLPDKKRFLKMEAKQVARFIKPFIMRRRK EEVLPELPDLIEINYPNELDHKQKAIYLAQLRQMQETIAGASDADINRRKIEILSGITRL RQICDTPSLFMDYNGESGKLDSLRTLLTQIKENGHRALIFSQFRGMLDIAEKEMEKLGLT SYKITGSTPANARQEMTRAFNNGSKDTFLISLKAGGVGLNLTGADTVILIDLWWNPAVEM QAISRAHRIGQKENVEVYRLITRGTIEEKILEMQESKKNLVTTVLDGNETRASMTIEDIK EILGVD >gi|304425798|gb|AEEM01000018.1| GENE 158 152516 - 153826 1700 436 aa, chain - ## HITS:1 COG:SPy0341 KEGG:ns NR:ns ## COG: SPy0341 COG1160 # Protein_GI_number: 15674498 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 436 1 436 436 795 92.0 0 MALPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGG IDDVDAPFMEQIKHQADIAMTEADVIVFVVSGKEGVTDADEYVSKILYRTNKPVILVVNK VDNPEMRSDIYDFYSLGLGDPYPVSSVHGIGTGDVLDAIVENLPVEEEDENPDIIKFSLI GRPNVGKSSLINAILGEERVIASPIAGTTRDAIDTNFTDSEGQEYTMIDTAGMRKSGKVY ENTEKYSVMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTIE KDNHTVAKWEEDIRDQFQFLSYAPIIFVSAATKQRLNKLPDMIKKISASQNKRIPSAVLN DVIMDAIAINPTPTDKGKRLKIFYGTQVSVKPPTFVIFVNEEELMHFSYMRFLENQIRAA FGFEGTPINLIARKRK >gi|304425798|gb|AEEM01000018.1| GENE 159 153978 - 154880 1019 300 aa, chain - ## HITS:1 COG:SPy0340 KEGG:ns NR:ns ## COG: SPy0340 COG1484 # Protein_GI_number: 15674497 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 300 300 355 58.0 6e-98 MEKIGQTLAKQLRQSRTDLNELTQVILADKEIADFITSNGLTQEQINRSLPKFNQFMVER EKFQNQDESYIAKGYKPALSMNEGYADVIYLETRELVEAKKRQDIKNRVTLIGLPASLKH ISTDDLDLGDPNRIEIYNYLNDYQKNLETGTQKGLYVFGNFGVGKSYLMAYLANRLSAKY GKSTTLLHFPTFCVDIKNAINTGTVKEQIDQIKQSEILVLDDIGAEQQSPWIRDDVLQVI LQYRMQENLLTFFTSNLDFKGLEEHFAASRSGDETWQAKRVMERIRYLAREIHLQGDNRR >gi|304425798|gb|AEEM01000018.1| GENE 160 154891 - 156048 1129 385 aa, chain - ## HITS:1 COG:SPy0339 KEGG:ns NR:ns ## COG: SPy0339 COG3611 # Protein_GI_number: 15674496 # Func_class: L Replication, recombination and repair # Function: Replication initiation/membrane attachment protein # Organism: Streptococcus pyogenes M1 GAS # 1 384 2 381 391 396 52.0 1e-110 MRPIDEFSYIKNNKVLLDSDSLSQLYHPVIGNHAVLLYDYLLAFFDDGVKRHKFSEILNH LQLSMRQVEEAFAILTAVDLLVLYQTRDAYVLKLQPALNRETFLSNPVYRRLLEQEIGDV AVAELDIKIPQEARDISKKFSDIFSAEGTPKPKANVSKNHFDLDSFERLMLRDGLQFKDE KADVVSIYSLADKYTMNWFDTYHLAKSTAINGKISPQRMTVQLEQPKNAKSQGQSKEQFD TKEQVIIREAKQANAREFLEKIKAPRRAVVTESERKLLEELANMSFLDEVINVMVLYTLN KTQSANLNKPYIMKVANDFAYQNITTAEAAVLKMRSFAQRNKDRKAQAKVAKSNVPEWTA KEYKHVATAEEKAKLEELKRSMLED >gi|304425798|gb|AEEM01000018.1| GENE 161 156032 - 156550 561 172 aa, chain - ## HITS:1 COG:SPy0338 KEGG:ns NR:ns ## COG: SPy0338 COG1327 # Protein_GI_number: 15674495 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Streptococcus pyogenes M1 GAS # 8 171 1 164 164 247 87.0 6e-66 MVEWGVCMRCPKCNYNKSSVIDSRQAEDGNTIRRRRECENCHTRFTTFERVEELPLLVIK KDGTREQFSREKILNGIFQSAQKRPVSSDDIEQVVSRIEQKVRSEYEGEVPSTAIGNLVM DELAELDEITYVRFASVYKSFKDVDEIEELLQQITNRVHSKKKRSNLNETDR >gi|304425798|gb|AEEM01000018.1| GENE 162 156718 - 158151 1061 477 aa, chain - ## HITS:1 COG:SPy0337 KEGG:ns NR:ns ## COG: SPy0337 COG0642 # Protein_GI_number: 15674494 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 7 473 30 499 500 417 47.0 1e-116 MLRILLVLTIFNLIVYFGTTQIFLARERYDVEQGAEVVRDFLSQESALTVDNLLDLLDEY NATGSLVEEDDAQYILDKSGGIDDLTSDNQDVAIFNKDKQLVLTTDKSVANFKTGTVGKT KIYRAPAFTGYYSTAKVHSKNTREVIGYVTLFQHFSSYYLMRHCLVAILLIAELVEIGLI LHVLFSSTKRFLRPLEEFQGIVSNIAENPGDLTVRSDIHSGDEIEEISANFDKMLDQIEG YTKRQARFVSDVSHELRTPIAVIKGHLGLLKRWGKEDQHILEESLDAAYHETDRMSIMVN EMLDMVRVQGSFDLHKGEKTDLKKSIEFVLGNFRILHPDFNFQFSTSVEECVFAEIYKNH FEQAILILIDNGVKYSSGSKIIHVTLDIQGDDAIVKVKDEGEGISQEDLKYIFERFYRTD KSRNRVSTQGGLGIGLAILKQIVDAYELNVSVNSVVDEGTEFTLVIPILKTKQDKTD >gi|304425798|gb|AEEM01000018.1| GENE 163 158202 - 158894 892 230 aa, chain - ## HITS:1 COG:L0131 KEGG:ns NR:ns ## COG: L0131 COG0745 # Protein_GI_number: 15673576 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Lactococcus lactis # 2 230 3 229 230 258 63.0 7e-69 MSKKILIIEDEKNLARFVSLELQHEGYSVVVETNGRLGLQTALDDDFDLILLDLMLPDMD GFEITRRLRLEKETSIIMMTARDSIMDIVAGLDRGADDYIVKPFAIEELLARVRAVFRRQ DVESKREQDSQGKEGLLGLRLNPQNRSAVRGDDEISLTKREYDLLSVLLSNVNRVMTREE LLASVWRYDTDIETNVVDVYIRYLRGKVDIPGKESYIQTVRGMGYIIREK >gi|304425798|gb|AEEM01000018.1| GENE 164 159296 - 160513 717 405 aa, chain - ## HITS:1 COG:SA1835 KEGG:ns NR:ns ## COG: SA1835 COG0582 # Protein_GI_number: 15927603 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Staphylococcus aureus N315 # 181 383 167 367 390 75 27.0 1e-13 MSEKRRDNKGRILKTGESQRKDGRYLYKYIDSFGEPQFVYSWKLVATDRVPAGKRDCISL REKIAELQKDIHDGIDVVGKKMTLCQLYAKQNAQRPKVRKNTETGRKYLMDILKKDKLGV RSIDSIKPSDAKEWAIRMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLKAV LDDDTVPKTVLTEEQEEKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFE NRLVNIDHQLLRDTEIGYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGY SDFLFLNRKNYPKVASDYNGMMKGLVKKYNKYNEDKLPHITPHSLRHTFCTNYANAGMNP KALQYIMGHANIAMTLNYYAHATFDSAMAEMKRLNKEKQQERLVA >gi|304425798|gb|AEEM01000018.1| GENE 165 160595 - 160798 234 67 aa, chain - ## HITS:1 COG:no KEGG:SPH_1403 NR:ns ## KEGG: SPH_1403 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 67 1 67 67 111 100.0 6e-24 MKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQIKRKQFEKI IDTLDAI >gi|304425798|gb|AEEM01000018.1| GENE 166 161259 - 161489 145 76 aa, chain - ## HITS:1 COG:no KEGG:SPH_1405 NR:ns ## KEGG: SPH_1405 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 76 1 76 76 142 100.0 4e-33 MKTQYPMIPFPLIVKATDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRG RMETRLITKILSFEIK >gi|304425798|gb|AEEM01000018.1| GENE 167 161486 - 161908 301 140 aa, chain - ## HITS:1 COG:no KEGG:SAG0919 NR:ns ## KEGG: SAG0919 # Name: not_defined # Def: Tn916 hypothetical protein # Organism: S.agalactiae # Pathway: not_defined # 1 140 18 157 157 250 99.0 9e-66 MKPSSFQTTIENQFDYICKRAMEDERKNYMLYLSRIAKREVSFSDVGDYLVSHFATTDNY STDFQIFTLNGLSVGVENDLLSEALRELPDKKREILLLFYFMDMSDSEIADLLKLNRSTV YRHRTSGLALIKKFMEEFEE >gi|304425798|gb|AEEM01000018.1| GENE 168 162413 - 162766 296 117 aa, chain + ## HITS:1 COG:no KEGG:SPH_1408 NR:ns ## KEGG: SPH_1408 # Name: not_defined # Def: transcriptional regulator, putative # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 117 1 117 117 216 100.0 3e-55 MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDL VSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED >gi|304425798|gb|AEEM01000018.1| GENE 169 163112 - 165031 953 639 aa, chain - ## HITS:1 COG:CAC1448 KEGG:ns NR:ns ## COG: CAC1448 COG0480 # Protein_GI_number: 15894727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 2 638 3 647 652 427 37.0 1e-119 MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGI TSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMG IPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNMCVTNFTESEQWDTVIE GNDDLLEKYMSGKSLEALELEQEESIRFHNCSLFPVYHGSAKNNIGIDNLIEVITNKFYS STHRGPSELCGNVFKIEYTKKRQRLAYIRLYSGVLHLRDSVRVSEKEKIKVTEMYTSING ELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREM LLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKEPTVIY MERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSFQNAVMEG IRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYL SFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGR SVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT Prediction of potential genes in microbial genomes Time: Sun May 29 12:51:19 2011 Seq name: gi|304425484|gb|AEEM01000019.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00029, whole genome shotgun sequence Length of sequence - 310746 bp Number of predicted genes - 310, with homology - 293 Number of transcription units - 160, operones - 78 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 264 - 308 11.1 1 1 Op 1 . - CDS 318 - 1229 662 ## SSU05_0923 Tn916 hypothetical protein 2 1 Op 2 . - CDS 1247 - 2248 769 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 3 1 Op 3 . - CDS 2245 - 4356 770 ## HMPREF0868_1206 hypothetical protein 4 1 Op 4 . - CDS 4425 - 6872 1210 ## SPCG_0166 hypothetical protein - Term 7298 - 7335 3.1 5 2 Tu 1 . - CDS 7337 - 7834 488 ## SPG_1237 Tn5251 hypothetical protein 6 3 Op 1 . - CDS 7951 - 8172 319 ## SPG_1238 Tn5251 hypothetical protein 7 3 Op 2 1/0.341 - CDS 8215 - 9420 605 ## COG2946 Putative phage replication protein RstA - Prom 9445 - 9504 1.9 - Term 9458 - 9504 1.7 8 4 Tu 1 . - CDS 9598 - 10584 517 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 10722 - 10781 3.4 9 5 Op 1 . - CDS 11012 - 11395 503 ## HMPREF0868_1214 hypothetical protein 10 5 Op 2 . - CDS 11414 - 11728 254 ## SPH_1425 conjugative transposon protein - Prom 11862 - 11921 5.6 - Term 11845 - 11887 6.3 11 6 Tu 1 . - CDS 12080 - 12616 612 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein - Prom 12684 - 12743 4.7 - Term 12713 - 12746 3.1 12 7 Tu 1 . - CDS 12758 - 13660 1023 ## COG0501 Zn-dependent protease with chaperone function - Prom 13722 - 13781 3.3 - Term 13740 - 13781 1.5 13 8 Tu 1 . - CDS 13787 - 14338 713 ## COG1704 Uncharacterized conserved protein - Prom 14452 - 14511 7.1 + Prom 14377 - 14436 6.3 14 9 Op 1 . + CDS 14581 - 14679 75 ## 15 9 Op 2 1/0.341 + CDS 14669 - 15382 716 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 16 9 Op 3 17/0.000 + CDS 15452 - 16825 1161 ## COG0168 Trk-type K+ transport systems, membrane components 17 9 Op 4 . + CDS 16837 - 17508 749 ## COG0569 K+ transport systems, NAD-binding component + Term 17516 - 17568 10.2 - Term 17372 - 17416 -0.8 18 10 Op 1 34/0.000 - CDS 17561 - 18391 831 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 19 10 Op 2 3/0.049 - CDS 18384 - 20060 333 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Term 20069 - 20108 4.1 20 11 Op 1 2/0.146 - CDS 20116 - 20664 715 ## COG4720 Predicted membrane protein 21 11 Op 2 . - CDS 20661 - 21515 968 ## COG1912 Uncharacterized conserved protein - Prom 21540 - 21599 10.0 - Term 21625 - 21659 5.3 22 12 Tu 1 . - CDS 21666 - 22892 1422 ## COG3633 Na+/serine symporter - Prom 23053 - 23112 10.2 + Prom 23109 - 23168 9.6 23 13 Tu 1 . + CDS 23227 - 24603 1236 ## COG1114 Branched-chain amino acid permeases + Term 24606 - 24639 -0.9 - Term 24582 - 24633 4.3 24 14 Op 1 2/0.146 - CDS 24640 - 25521 626 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 25 14 Op 2 . - CDS 25484 - 26263 577 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 26292 - 26351 4.5 - Term 26294 - 26331 7.3 26 15 Tu 1 . - CDS 26366 - 27001 994 ## COG2910 Putative NADH-flavin reductase - Prom 27057 - 27116 8.1 + Prom 27096 - 27155 10.0 27 16 Tu 1 . + CDS 27181 - 27621 390 ## COG1959 Predicted transcriptional regulator + Term 27622 - 27658 1.1 - Term 27610 - 27646 4.9 28 17 Op 1 32/0.000 - CDS 27653 - 28345 884 ## COG2011 ABC-type metal ion transport system, permease component 29 17 Op 2 1/0.341 - CDS 28346 - 29410 1288 ## COG1135 ABC-type metal ion transport system, ATPase component 30 17 Op 3 1/0.341 - CDS 29391 - 30773 1296 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 30849 - 30908 9.4 - Term 30914 - 30959 7.1 31 18 Tu 1 . - CDS 30983 - 31882 1202 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 31910 - 31969 10.7 32 19 Tu 1 . - CDS 31996 - 32838 966 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 32876 - 32935 5.2 33 20 Op 1 3/0.049 - CDS 32958 - 34103 1130 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 34 20 Op 2 1/0.341 - CDS 34100 - 34897 649 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 35 20 Op 3 . - CDS 34958 - 35644 996 ## COG2071 Predicted glutamine amidotransferases - Prom 35760 - 35819 7.0 - Term 35763 - 35806 6.1 36 21 Tu 1 . - CDS 35833 - 36549 1117 ## COG0217 Uncharacterized conserved protein - Prom 36572 - 36631 7.7 - Term 36583 - 36624 4.5 37 22 Op 1 8/0.000 - CDS 36784 - 38160 1143 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 38 22 Op 2 1/0.341 - CDS 38176 - 39582 1054 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 39602 - 39661 4.1 - Term 39691 - 39755 8.1 39 23 Op 1 . - CDS 39769 - 40644 285 ## COG1737 Transcriptional regulators 40 23 Op 2 . - CDS 40717 - 41547 905 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 41573 - 41632 5.8 - Term 41617 - 41654 5.1 41 24 Op 1 . - CDS 41665 - 42345 547 ## COG0789 Predicted transcriptional regulators - Prom 42366 - 42425 3.4 42 24 Op 2 3/0.049 - CDS 42431 - 43525 968 ## COG1323 Predicted nucleotidyltransferase 43 24 Op 3 6/0.000 - CDS 43618 - 44355 878 ## COG0500 SAM-dependent methyltransferases - Term 44383 - 44421 5.0 44 24 Op 4 1/0.341 - CDS 44441 - 44794 547 ## COG0799 Uncharacterized homolog of plant Iojap protein 45 24 Op 5 1/0.341 - CDS 44795 - 45307 316 ## COG1335 Amidases related to nicotinamidase 46 24 Op 6 9/0.000 - CDS 45304 - 45903 883 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 47 24 Op 7 7/0.000 - CDS 45893 - 46531 629 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 48 24 Op 8 2/0.146 - CDS 46608 - 46922 456 ## PROTEIN SUPPORTED gi|15674474|ref|NP_268648.1| hypothetical protein SPy_0307 - Prom 46965 - 47024 2.2 49 25 Op 1 6/0.000 - CDS 47063 - 48181 1047 ## COG1161 Predicted GTPases 50 25 Op 2 . - CDS 48181 - 48720 576 ## COG2179 Predicted hydrolase of the HAD superfamily - Prom 48762 - 48821 5.6 - Term 48793 - 48828 3.5 51 26 Op 1 18/0.000 - CDS 48835 - 50223 1363 ## COG0477 Permeases of the major facilitator superfamily 52 26 Op 2 3/0.049 - CDS 50232 - 50648 408 ## COG1846 Transcriptional regulators - Prom 50695 - 50754 7.3 - Term 50734 - 50780 7.3 53 27 Tu 1 . - CDS 50794 - 51675 966 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 51736 - 51795 5.7 54 28 Op 1 21/0.000 - CDS 51863 - 53305 2005 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 55 28 Op 2 31/0.000 - CDS 53305 - 54771 390 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 56 28 Op 3 1/0.341 - CDS 54771 - 55073 593 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit - Prom 55124 - 55183 9.1 - Term 55153 - 55190 3.2 57 29 Op 1 2/0.146 - CDS 55197 - 55745 783 ## COG1335 Amidases related to nicotinamidase 58 29 Op 2 2/0.146 - CDS 55745 - 56530 1073 ## COG4465 Pleiotropic transcriptional repressor - Prom 56555 - 56614 11.5 59 30 Op 1 . - CDS 56743 - 57957 1418 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 60 30 Op 2 . - CDS 57994 - 59760 1252 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 59835 - 59894 8.4 + Prom 59797 - 59856 10.5 61 31 Tu 1 . + CDS 60084 - 60536 627 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 60603 - 60641 5.0 62 32 Tu 1 . - CDS 60613 - 62016 1119 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 62046 - 62105 9.7 + Prom 61998 - 62057 5.4 63 33 Tu 1 . + CDS 62087 - 63049 1285 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Term 63011 - 63045 -0.8 64 34 Op 1 . - CDS 63114 - 63317 213 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 65 34 Op 2 . - CDS 63330 - 63833 493 ## GALLO_1883 hypothetical protein 66 34 Op 3 . - CDS 63864 - 64331 579 ## GALLO_1884 hypothetical protein - Prom 64440 - 64499 9.3 - Term 64550 - 64587 3.7 67 35 Op 1 . - CDS 64676 - 64747 106 ## 68 35 Op 2 1/0.341 - CDS 64830 - 66845 2423 ## COG1200 RecG-like helicase - Prom 66870 - 66929 5.8 - Term 66868 - 66920 6.5 69 36 Op 1 5/0.000 - CDS 66931 - 68037 1275 ## COG0787 Alanine racemase 70 36 Op 2 1/0.341 - CDS 68094 - 68453 242 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) - Prom 68494 - 68553 2.2 - Term 68521 - 68557 5.5 71 37 Op 1 1/0.341 - CDS 68574 - 69629 1313 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 72 37 Op 2 2/0.146 - CDS 69633 - 70664 1310 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 70697 - 70756 5.9 73 37 Op 3 . - CDS 70761 - 73289 2953 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 73312 - 73371 7.2 - Term 73502 - 73548 6.1 74 38 Op 1 . - CDS 73575 - 74456 1252 ## COG1940 Transcriptional regulator/sugar kinase - Prom 74483 - 74542 8.1 - Term 74561 - 74590 1.4 75 38 Op 2 . - CDS 74610 - 76544 2328 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 76714 - 76773 8.0 + Prom 76600 - 76659 8.5 76 39 Op 1 5/0.000 + CDS 76743 - 78182 1567 ## COG1621 Beta-fructosidases (levanase/invertase) 77 39 Op 2 . + CDS 78184 - 79146 772 ## COG1609 Transcriptional regulators + Term 79148 - 79202 8.0 - Term 79209 - 79245 5.0 78 40 Op 1 10/0.000 - CDS 79252 - 79680 580 ## COG0781 Transcription termination factor 79 40 Op 2 4/0.000 - CDS 79673 - 80062 569 ## COG1302 Uncharacterized protein conserved in bacteria - Term 80085 - 80123 5.2 80 40 Op 3 . - CDS 80140 - 80700 894 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 80841 - 80900 10.2 + Prom 80779 - 80838 7.8 81 41 Tu 1 . + CDS 80868 - 81182 387 ## GALLO_1898 hypothetical protein + Term 81202 - 81244 2.0 - Term 81195 - 81226 3.2 82 42 Op 1 . - CDS 81233 - 82057 727 ## GALLO_1899 hypothetical protein 83 42 Op 2 1/0.341 - CDS 82080 - 82544 617 ## COG2131 Deoxycytidylate deaminase 84 42 Op 3 . - CDS 82566 - 83627 1168 ## COG0006 Xaa-Pro aminopeptidase - Prom 83651 - 83710 5.0 - Term 83730 - 83779 8.2 85 43 Op 1 . - CDS 83807 - 84151 321 ## GALLO_1902 hypothetical protein - Prom 84208 - 84267 4.5 86 43 Op 2 . - CDS 84294 - 85520 1070 ## COG2815 Uncharacterized protein conserved in bacteria - Prom 85634 - 85693 7.4 - Term 85738 - 85773 6.0 87 44 Tu 1 . - CDS 85781 - 88606 2940 ## COG0178 Excinuclease ATPase subunit - Prom 88756 - 88815 6.0 + Prom 88725 - 88784 7.6 88 45 Tu 1 . + CDS 88926 - 89870 949 ## COG0598 Mg2+ and Co2+ transporters + Prom 90241 - 90300 6.8 89 46 Tu 1 . + CDS 90381 - 91037 797 ## COG4858 Uncharacterized membrane-bound protein conserved in bacteria + Term 91054 - 91091 8.2 - Term 91042 - 91078 4.2 90 47 Op 1 . - CDS 91083 - 91532 514 ## GALLO_1907 hypothetical protein 91 47 Op 2 . - CDS 91534 - 91743 194 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 92 47 Op 3 . - CDS 91746 - 92270 487 ## GALLO_1909 hypothetical protein - Prom 92309 - 92368 10.3 - Term 92352 - 92379 -0.8 93 48 Op 1 21/0.000 - CDS 92405 - 92644 394 ## PROTEIN SUPPORTED gi|15901383|ref|NP_345987.1| 30S ribosomal protein S18 94 48 Op 2 24/0.000 - CDS 92705 - 93220 597 ## COG0629 Single-stranded DNA-binding protein 95 48 Op 3 . - CDS 93232 - 93522 478 ## PROTEIN SUPPORTED gi|161611280|ref|YP_140168.2| 30S ribosomal protein S6 - Prom 93591 - 93650 8.3 - Term 93695 - 93735 3.2 96 49 Tu 1 . - CDS 93747 - 93911 230 ## GALLO_1913 hypothetical protein - Prom 93950 - 94009 8.1 - Term 94025 - 94077 0.4 97 50 Op 1 1/0.341 - CDS 94137 - 94685 131 ## COG1268 Uncharacterized conserved protein 98 50 Op 2 4/0.000 - CDS 94685 - 95353 290 ## COG0132 Dethiobiotin synthetase 99 50 Op 3 . - CDS 95346 - 96281 646 ## COG0502 Biotin synthase and related enzymes - Prom 96303 - 96362 9.3 - Term 96499 - 96551 7.1 100 51 Op 1 11/0.000 - CDS 96558 - 98096 408 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 101 51 Op 2 . - CDS 98108 - 98668 823 ## COG0450 Peroxiredoxin - Prom 98698 - 98757 6.0 - Term 98839 - 98875 2.8 102 52 Op 1 24/0.000 - CDS 98882 - 99601 321 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 103 52 Op 2 21/0.000 - CDS 99611 - 100384 830 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 104 52 Op 3 . - CDS 100404 - 101384 1394 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 105 52 Op 4 3/0.049 - CDS 101386 - 102897 961 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 106 52 Op 5 . - CDS 102894 - 104417 1413 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 107 52 Op 6 . - CDS 104425 - 105630 865 ## GALLO_1924 hypothetical protein - Prom 105674 - 105733 6.1 + Prom 106664 - 106723 7.0 108 53 Tu 1 . + CDS 106767 - 107921 559 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 109 54 Tu 1 . + CDS 108150 - 108392 79 ## gi|293365100|ref|ZP_06611817.1| ADP-ribosylglycohydrolase + Term 108423 - 108449 0.3 - Term 109002 - 109035 0.4 110 55 Tu 1 . - CDS 109047 - 110252 1262 ## COG0477 Permeases of the major facilitator superfamily - Prom 110442 - 110501 12.9 + Prom 110401 - 110460 8.3 111 56 Op 1 1/0.341 + CDS 110488 - 111087 879 ## COG0431 Predicted flavoprotein 112 56 Op 2 . + CDS 111101 - 113515 2979 ## COG0431 Predicted flavoprotein + Term 113518 - 113566 11.1 - Term 113731 - 113773 -0.8 113 57 Tu 1 . - CDS 113784 - 114212 188 ## GALLO_1930 hypothetical protein 114 58 Tu 1 . - CDS 114320 - 114739 457 ## GALLO_1931 hypothetical protein - Term 114768 - 114801 5.4 115 59 Op 1 . - CDS 114822 - 115229 511 ## 116 59 Op 2 . - CDS 115242 - 115649 392 ## 117 59 Op 3 . - CDS 115662 - 116069 379 ## 118 59 Op 4 . - CDS 116082 - 116492 277 ## 119 59 Op 5 . - CDS 116494 - 120465 2482 ## 120 59 Op 6 . - CDS 120474 - 121181 637 ## COG1404 Subtilisin-like serine proteases - Prom 121249 - 121308 10.2 - Term 121280 - 121313 5.4 121 60 Tu 1 . - CDS 121339 - 122382 1254 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - Prom 122572 - 122631 6.7 - Term 122751 - 122782 4.1 122 61 Tu 1 . - CDS 122789 - 123103 479 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 123335 - 123394 9.4 123 62 Tu 1 . + CDS 123660 - 123860 230 ## COG0671 Membrane-associated phospholipid phosphatase + Term 123875 - 123912 2.1 - Term 123863 - 123899 5.1 124 63 Op 1 13/0.000 - CDS 123940 - 124800 479 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 125 63 Op 2 . - CDS 124828 - 126132 1378 ## COG0029 Aspartate oxidase - Prom 126232 - 126291 7.6 + Prom 126274 - 126333 10.5 126 64 Tu 1 . + CDS 126368 - 127288 896 ## COG0379 Quinolinate synthase + Term 127312 - 127369 14.3 + Prom 127599 - 127658 2.8 127 65 Op 1 . + CDS 127707 - 127994 245 ## COG1396 Predicted transcriptional regulators 128 65 Op 2 . + CDS 128011 - 128700 217 ## str1951 hypothetical protein 129 65 Op 3 . + CDS 128693 - 130243 207 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 130260 - 130293 3.1 - Term 130240 - 130287 4.4 130 66 Tu 1 . - CDS 130291 - 132627 2372 ## COG1193 Mismatch repair ATPase (MutS family) - Term 132691 - 132725 3.6 131 67 Op 1 . - CDS 132733 - 133281 411 ## COG1286 Uncharacterized membrane protein, required for colicin V production 132 67 Op 2 . - CDS 133284 - 133592 423 ## GALLO_1943 hypothetical protein - Prom 133708 - 133767 8.4 + Prom 133572 - 133631 6.8 133 68 Op 1 3/0.049 + CDS 133714 - 134616 874 ## COG1039 Ribonuclease HIII 134 68 Op 2 2/0.146 + CDS 134633 - 135226 771 ## COG0681 Signal peptidase I + Term 135234 - 135269 1.0 + Prom 135258 - 135317 6.5 135 69 Tu 1 . + CDS 135344 - 137824 2990 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 137831 - 137867 4.1 + Prom 137851 - 137910 7.8 136 70 Tu 1 . + CDS 138059 - 138562 580 ## GALLO_1951 hypothetical protein + Term 138586 - 138626 1.1 - Term 138572 - 138614 4.0 137 71 Tu 1 . - CDS 138617 - 139714 1119 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 139739 - 139798 7.3 + Prom 139832 - 139891 6.5 138 72 Op 1 . + CDS 139940 - 142264 2990 ## COG1882 Pyruvate-formate lyase + Term 142270 - 142320 12.4 139 72 Op 2 . + CDS 142324 - 142761 316 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 142829 - 142872 10.1 140 73 Op 1 . - CDS 143131 - 143745 912 ## GALLO_1955 hypothetical protein - Prom 143771 - 143830 7.9 141 73 Op 2 . - CDS 143844 - 144764 676 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 142 73 Op 3 . - CDS 144761 - 145507 867 ## GALLO_1957 hypothetical protein - Prom 145574 - 145633 8.9 - Term 145800 - 145854 4.3 143 74 Tu 1 . - CDS 145855 - 146700 1302 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Prom 146735 - 146794 11.4 + Prom 146714 - 146773 8.0 144 75 Tu 1 . + CDS 146822 - 149101 2577 ## GALLO_1959 X-prolyl-dipeptidyl aminopeptidase + Term 149119 - 149170 2.7 - Term 149113 - 149152 4.3 145 76 Op 1 40/0.000 - CDS 149306 - 150958 1132 ## COG0642 Signal transduction histidine kinase 146 76 Op 2 7/0.000 - CDS 150951 - 151628 710 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 147 76 Op 3 32/0.000 - CDS 151628 - 152278 672 ## COG0704 Phosphate uptake regulator 148 76 Op 4 41/0.000 - CDS 152275 - 153027 213 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 149 76 Op 5 38/0.000 - CDS 153017 - 153895 820 ## COG0581 ABC-type phosphate transport system, permease component 150 76 Op 6 39/0.000 - CDS 153901 - 154554 577 ## COG0573 ABC-type phosphate transport system, permease component - Prom 154651 - 154710 4.5 - Term 154675 - 154725 2.3 151 76 Op 7 . - CDS 154756 - 155625 1178 ## COG0226 ABC-type phosphate transport system, periplasmic component + Prom 155650 - 155709 6.8 152 77 Tu 1 . + CDS 155887 - 156165 360 ## COG0718 Uncharacterized protein conserved in bacteria + Term 156170 - 156214 7.8 + Prom 156346 - 156405 8.9 153 78 Tu 1 . + CDS 156522 - 157349 626 ## COG2339 Predicted membrane protein + Term 157364 - 157399 -1.0 - Term 157351 - 157386 -1.0 154 79 Tu 1 . - CDS 157441 - 158172 659 ## COG0789 Predicted transcriptional regulators - Prom 158193 - 158252 2.8 155 80 Op 1 . - CDS 158275 - 158862 684 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Term 158880 - 158917 5.5 156 80 Op 2 . - CDS 158935 - 159468 613 ## GALLO_1970 hypothetical protein - Prom 159496 - 159555 6.9 + Prom 159473 - 159532 7.2 157 81 Tu 1 . + CDS 159689 - 160861 924 ## COG2081 Predicted flavoproteins + Term 160872 - 160903 -0.6 + Prom 160904 - 160963 14.3 158 82 Tu 1 . + CDS 160992 - 161261 438 ## PROTEIN SUPPORTED gi|225869236|ref|YP_002745184.1| 30S ribosomal protein S14 + Term 161297 - 161341 2.3 - Term 161293 - 161321 1.4 159 83 Op 1 1/0.341 - CDS 161326 - 161805 334 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 160 83 Op 2 . - CDS 161815 - 162840 909 ## COG2008 Threonine aldolase - Prom 162876 - 162935 11.4 + Prom 162818 - 162877 9.3 161 84 Tu 1 . + CDS 162949 - 163350 404 ## COG1846 Transcriptional regulators - Term 163213 - 163252 4.3 162 85 Op 1 9/0.000 - CDS 163339 - 163665 291 ## COG4392 Predicted membrane protein 163 85 Op 2 . - CDS 163655 - 164350 839 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 164423 - 164482 7.1 - Term 164431 - 164478 5.9 164 86 Op 1 9/0.000 - CDS 164495 - 165505 1357 ## COG0533 Metal-dependent proteases with possible chaperone activity 165 86 Op 2 20/0.000 - CDS 165515 - 165955 325 ## PROTEIN SUPPORTED gi|15902174|ref|NP_357724.1| ribosomal protein alanine acetyltransferase 166 86 Op 3 . - CDS 165939 - 166628 288 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase - Prom 166654 - 166713 5.1 + Prom 166623 - 166682 8.7 167 87 Op 1 7/0.000 + CDS 166809 - 167039 394 ## COG5503 Uncharacterized conserved small protein 168 87 Op 2 . + CDS 167041 - 168723 2182 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 168731 - 168769 5.2 - Term 168926 - 168971 5.3 169 88 Tu 1 . - CDS 168989 - 169612 815 ## COG3942 Surface antigen - Prom 169661 - 169720 8.3 - Term 169766 - 169794 -1.0 170 89 Op 1 21/0.000 - CDS 169806 - 171245 2186 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 171 89 Op 2 3/0.049 - CDS 171247 - 175764 5499 ## COG0069 Glutamate synthase domain 2 - Prom 175823 - 175882 9.7 - Term 175898 - 175930 2.4 172 90 Op 1 5/0.000 - CDS 175942 - 177288 1679 ## COG0174 Glutamine synthetase 173 90 Op 2 2/0.146 - CDS 177338 - 177709 458 ## COG0789 Predicted transcriptional regulators - Prom 177737 - 177796 6.2 174 91 Tu 1 2/0.146 - CDS 177798 - 178334 251 ## COG4129 Predicted membrane protein - Prom 178495 - 178554 5.8 - Term 178507 - 178535 1.4 175 92 Op 1 26/0.000 - CDS 178563 - 179759 1830 ## COG0126 3-phosphoglycerate kinase - Prom 179788 - 179847 6.4 - Term 179889 - 179933 7.6 176 92 Op 2 1/0.341 - CDS 179947 - 180960 1414 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 180991 - 181050 12.0 - Term 181116 - 181155 6.8 177 93 Op 1 51/0.000 - CDS 181165 - 183243 2753 ## COG0480 Translation elongation factors (GTPases) - Prom 183272 - 183331 6.3 - Term 183341 - 183375 1.4 178 93 Op 2 56/0.000 - CDS 183444 - 183914 782 ## PROTEIN SUPPORTED gi|171779185|ref|ZP_02920156.1| hypothetical protein STRINF_01033 179 93 Op 3 . - CDS 183904 - 183990 95 ## PROTEIN SUPPORTED gi|94991745|ref|YP_599844.1| 30S ribosomal protein S12 180 93 Op 4 . - CDS 183935 - 184348 681 ## PROTEIN SUPPORTED gi|55821763|ref|YP_140205.1| 30S ribosomal protein S12 - Prom 184483 - 184542 6.1 - Term 184611 - 184637 -1.0 181 94 Tu 1 . - CDS 184640 - 185452 1027 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 185482 - 185541 8.7 - Term 185488 - 185541 6.3 182 95 Op 1 3/0.049 - CDS 185599 - 186537 1028 ## COG3481 Predicted HD-superfamily hydrolase 183 95 Op 2 2/0.146 - CDS 186527 - 187801 1251 ## COG1322 Uncharacterized protein conserved in bacteria 184 95 Op 3 6/0.000 - CDS 187803 - 188432 563 ## COG1564 Thiamine pyrophosphokinase 185 95 Op 4 10/0.000 - CDS 188425 - 189087 937 ## COG0036 Pentose-5-phosphate-3-epimerase 186 95 Op 5 . - CDS 189094 - 189966 483 ## COG1162 Predicted GTPases - Prom 189990 - 190049 8.7 + Prom 190551 - 190610 7.6 187 96 Tu 1 . + CDS 190655 - 190777 91 ## + Term 190824 - 190862 4.1 + TRNA 191207 - 191290 60.2 # Leu CAG 0 0 + TRNA 191347 - 191435 62.3 # Ser CGA 0 0 - Term 192118 - 192144 -1.0 188 97 Tu 1 . - CDS 192162 - 192362 289 ## GALLO_2017 hypothetical immunity protein - Prom 192406 - 192465 7.9 189 98 Op 1 9/0.000 - CDS 192494 - 193858 843 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 190 98 Op 2 . - CDS 193871 - 194638 468 ## COG3279 Response regulator of the LytR/AlgR family - Term 194661 - 194696 4.1 191 98 Op 3 . - CDS 194698 - 194991 237 ## GALLO_2009 putative bacteriocin immunity protein - Prom 195202 - 195261 4.1 192 99 Op 1 . - CDS 195539 - 195850 379 ## GALLO_2011 hypothetical protein 193 99 Op 2 . - CDS 195862 - 196011 197 ## 194 99 Op 3 . - CDS 196021 - 196320 233 ## GALLO_2012 hypothetical protein - Prom 196564 - 196623 7.2 + Prom 196294 - 196353 3.8 195 100 Op 1 . + CDS 196498 - 196605 69 ## 196 100 Op 2 . + CDS 196620 - 196757 224 ## GALLO_2013 hypothetical protein + Term 196759 - 196810 10.4 197 101 Op 1 9/0.000 - CDS 196779 - 198086 697 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 198 101 Op 2 1/0.341 - CDS 198094 - 198825 354 ## COG3279 Response regulator of the LytR/AlgR family 199 101 Op 3 . - CDS 198842 - 199168 213 ## COG3279 Response regulator of the LytR/AlgR family - Prom 199276 - 199335 8.6 200 102 Tu 1 . - CDS 199369 - 199569 234 ## GALLO_2017 hypothetical immunity protein - Prom 199599 - 199658 8.2 201 103 Op 1 . - CDS 199707 - 199898 84 ## 202 103 Op 2 . - CDS 199891 - 200904 691 ## GALLO_2018 cell wall associated protein (LPXTG motif) possibly involved in bacteriocin synthesis - Prom 201078 - 201137 5.6 - Term 201087 - 201131 3.0 203 104 Tu 1 . - CDS 201157 - 201372 140 ## gi|171779166|ref|ZP_02920137.1| hypothetical protein STRINF_01012 - Prom 201396 - 201455 5.0 - Term 201879 - 201930 4.0 204 105 Op 1 . - CDS 201962 - 202159 391 ## GALLO_2020 putative bacteriocin 205 105 Op 2 . - CDS 202178 - 202429 361 ## GALLO_2021 putative bacteriocin - Prom 202611 - 202670 9.5 + Prom 202495 - 202554 5.9 206 106 Tu 1 . + CDS 202676 - 202933 114 ## GALLO_2022 hypothetical protein + Prom 202939 - 202998 4.3 207 107 Op 1 . + CDS 203040 - 205187 227 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 208 107 Op 2 . + CDS 205199 - 206593 1221 ## GALLO_2024 putative accessory factor for bacteriocin ABC-transporter + Term 206599 - 206633 2.0 + Prom 206781 - 206840 4.5 209 108 Tu 1 3/0.049 + CDS 206872 - 207459 209 ## COG1266 Predicted metal-dependent membrane protease + Prom 207464 - 207523 4.1 210 109 Tu 1 . + CDS 207665 - 208336 289 ## COG1266 Predicted metal-dependent membrane protease - Term 208320 - 208366 7.7 211 110 Op 1 . - CDS 208370 - 209242 952 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 212 110 Op 2 . - CDS 209312 - 209836 311 ## COG3797 Uncharacterized protein conserved in bacteria 213 110 Op 3 3/0.049 - CDS 209833 - 210402 788 ## COG1658 Small primase-like proteins (Toprim domain) 214 110 Op 4 . - CDS 210395 - 211174 807 ## COG0084 Mg-dependent DNase - Prom 211225 - 211284 2.8 - Term 211235 - 211282 9.1 215 111 Tu 1 . - CDS 211311 - 213647 2743 ## COG4932 Predicted outer membrane protein - Prom 213841 - 213900 11.8 + Prom 214014 - 214073 5.2 216 112 Tu 1 . + CDS 214119 - 215087 1044 ## COG0039 Malate/lactate dehydrogenases + Term 215136 - 215182 4.6 + Prom 215666 - 215725 4.9 217 113 Tu 1 . + CDS 215855 - 216454 269 ## GALLO_2035 hypothetical protease + Term 216594 - 216649 7.6 - Term 216584 - 216635 11.3 218 114 Tu 1 . - CDS 216883 - 218679 1761 ## COG2217 Cation transport ATPase - Prom 218702 - 218761 7.5 + Prom 218691 - 218750 12.2 219 115 Op 1 2/0.146 + CDS 218864 - 219076 85 ## COG3464 Transposase and inactivated derivatives 220 115 Op 2 . + CDS 219076 - 219243 60 ## COG3464 Transposase and inactivated derivatives - Term 219199 - 219233 4.5 221 116 Tu 1 . - CDS 219298 - 220236 770 ## COG3764 Sortase (surface protein transpeptidase) - Prom 220291 - 220350 2.2 - Term 220314 - 220362 4.4 222 117 Op 1 . - CDS 220381 - 221817 1685 ## GALLO_2039 cell wall anchored protein (LPXTG motif) - Prom 221839 - 221898 3.7 223 117 Op 2 . - CDS 221908 - 226905 4462 ## COG4886 Leucine-rich repeat (LRR) protein 224 117 Op 3 . - CDS 226946 - 227539 566 ## COG0681 Signal peptidase I 225 117 Op 4 . - CDS 227526 - 227783 373 ## GALLO_2042 hypothetical protein - Prom 227848 - 227907 6.4 - Term 228449 - 228486 6.1 226 118 Tu 1 . - CDS 228494 - 229147 407 ## COG0500 SAM-dependent methyltransferases - Prom 229235 - 229294 11.8 + Prom 229300 - 229359 9.6 227 119 Tu 1 . + CDS 229387 - 230958 1112 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 231036 - 231088 9.2 228 120 Op 1 42/0.000 - CDS 231408 - 232226 619 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 229 120 Op 2 25/0.000 - CDS 232237 - 232950 243 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 230 120 Op 3 . - CDS 232993 - 233919 846 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 233972 - 234031 8.0 - Term 234112 - 234155 3.3 231 121 Op 1 . - CDS 234176 - 234538 425 ## COG3493 Na+/citrate symporter 232 121 Op 2 3/0.049 - CDS 234548 - 235447 956 ## COG3493 Na+/citrate symporter 233 121 Op 3 . - CDS 235469 - 237091 2416 ## COG0281 Malic enzyme - Prom 237137 - 237196 6.7 + Prom 237153 - 237212 4.5 234 122 Tu 1 . + CDS 237248 - 238129 573 ## COG0583 Transcriptional regulator + Term 238173 - 238213 8.2 - Term 238161 - 238201 9.1 235 123 Op 1 . - CDS 238211 - 239614 1339 ## COG4099 Predicted peptidase - Prom 239690 - 239749 3.4 236 123 Op 2 . - CDS 239772 - 239951 140 ## - Prom 240005 - 240064 7.9 - Term 240070 - 240105 3.1 237 124 Op 1 6/0.000 - CDS 240111 - 241385 1192 ## COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) 238 124 Op 2 7/0.000 - CDS 241378 - 241617 425 ## COG0236 Acyl carrier protein 239 124 Op 3 6/0.000 - CDS 241648 - 242910 950 ## COG1696 Predicted membrane protein involved in D-alanine export 240 124 Op 4 . - CDS 242907 - 244445 1272 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 241 124 Op 5 . - CDS 244460 - 244582 76 ## - Prom 244714 - 244773 4.0 - Term 244755 - 244805 2.4 242 125 Op 1 . - CDS 244833 - 245063 229 ## - Prom 245089 - 245148 7.8 - Term 245107 - 245145 2.1 243 125 Op 2 . - CDS 245156 - 245365 456 ## GALLO_2058 hypothetical protein - Prom 245390 - 245449 8.5 - Term 245445 - 245473 -0.9 244 126 Op 1 16/0.000 - CDS 245482 - 246105 824 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 245 126 Op 2 16/0.000 - CDS 246139 - 247533 1735 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 246 126 Op 3 12/0.000 - CDS 247535 - 249310 2546 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A - Prom 249527 - 249586 5.1 247 126 Op 4 13/0.000 - CDS 250114 - 250434 350 ## COG1436 Archaeal/vacuolar-type H+-ATPase subunit F 248 126 Op 5 . - CDS 250424 - 251434 948 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 249 126 Op 6 . - CDS 251449 - 252033 724 ## GALLO_2064 putative V-type sodium ATP synthase, subunit E 250 126 Op 7 16/0.000 - CDS 252104 - 252583 789 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 251 126 Op 8 . - CDS 252585 - 254579 1375 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 252 126 Op 9 . - CDS 254569 - 254892 317 ## GALLO_2067 hypothetical protein - Term 255219 - 255253 5.2 253 127 Tu 1 . - CDS 255275 - 255409 220 ## PROTEIN SUPPORTED gi|15674431|ref|NP_268605.1| 50S ribosomal protein L34 - Prom 255477 - 255536 8.4 - Term 255572 - 255606 1.1 254 128 Tu 1 . - CDS 255614 - 256015 412 ## GALLO_2071 hypothetical protein - Prom 256061 - 256120 8.5 - Term 256110 - 256142 -0.9 255 129 Op 1 . - CDS 256163 - 256549 253 ## GALLO_2072 hypothetical protein 256 129 Op 2 1/0.341 - CDS 256560 - 257015 469 ## COG3279 Response regulator of the LytR/AlgR family 257 129 Op 3 45/0.000 - CDS 257038 - 257877 734 ## COG0842 ABC-type multidrug transport system, permease component 258 129 Op 4 . - CDS 257878 - 258729 812 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 258778 - 258837 5.7 - Term 258816 - 258844 -1.0 259 130 Op 1 16/0.000 - CDS 258852 - 259850 1352 ## COG1847 Predicted RNA-binding protein 260 130 Op 2 22/0.000 - CDS 259863 - 260678 820 ## COG0706 Preprotein translocase subunit YidC 261 130 Op 3 . - CDS 260662 - 261021 369 ## COG0594 RNase P protein component - Prom 261042 - 261101 8.2 262 131 Tu 1 . - CDS 261150 - 262544 1394 ## COG0165 Argininosuccinate lyase - Prom 262605 - 262664 4.0 263 132 Tu 1 . - CDS 263042 - 264232 1646 ## COG0137 Argininosuccinate synthase - Prom 264366 - 264425 12.2 - Term 264396 - 264438 5.5 264 133 Op 1 . - CDS 264467 - 265648 692 ## COG0477 Permeases of the major facilitator superfamily - Term 265668 - 265700 -0.8 265 133 Op 2 . - CDS 265721 - 265897 211 ## - Prom 265950 - 266009 12.9 - Term 266009 - 266047 3.1 266 134 Op 1 . - CDS 266056 - 266784 510 ## SMU.1809 putative bacteroiocin operon protein ScnG-like protein 267 134 Op 2 . - CDS 266781 - 267524 399 ## SmuNN2025_0329 hypothetical protein 268 134 Op 3 . - CDS 267526 - 268434 266 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 268507 - 268566 5.8 + Prom 268517 - 268576 5.8 269 135 Op 1 40/0.000 + CDS 268601 - 269299 457 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 270 135 Op 2 . + CDS 269309 - 270658 892 ## COG0642 Signal transduction histidine kinase - Term 270647 - 270700 8.1 271 136 Tu 1 . - CDS 270705 - 271871 1035 ## COG2807 Cyanate permease - Prom 271905 - 271964 6.6 - Term 272312 - 272342 -0.5 272 137 Tu 1 . - CDS 272357 - 273841 1980 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 273901 - 273960 2.5 - Term 273949 - 273979 -0.9 273 138 Tu 1 . - CDS 273999 - 274493 514 ## COG4894 Uncharacterized conserved protein - Prom 274534 - 274593 5.0 274 139 Tu 1 . - CDS 274596 - 275090 640 ## COG0288 Carbonic anhydrase - Prom 275137 - 275196 8.9 275 140 Tu 1 . - CDS 275216 - 276463 1424 ## COG1066 Predicted ATP-dependent serine protease - Prom 276523 - 276582 3.1 276 141 Op 1 1/0.341 - CDS 276595 - 277128 494 ## COG0406 Fructose-2,6-bisphosphatase 277 141 Op 2 . - CDS 277159 - 277605 647 ## COG0756 dUTPase - Prom 277634 - 277693 7.9 - Term 277660 - 277697 4.1 278 142 Op 1 . - CDS 277699 - 278928 798 ## GALLO_2089 putative major facilitator family transporter 279 142 Op 2 . - CDS 278944 - 280146 513 ## GALLO_2090 putative major facilitator family transporter - Prom 280194 - 280253 6.4 - Term 280260 - 280300 2.0 280 143 Tu 1 . - CDS 280311 - 281078 735 ## COG1636 Uncharacterized protein conserved in bacteria - Prom 281106 - 281165 4.8 + Prom 281137 - 281196 4.7 281 144 Op 1 3/0.049 + CDS 281274 - 282290 1559 ## COG0240 Glycerol-3-phosphate dehydrogenase 282 144 Op 2 . + CDS 282350 - 283264 999 ## COG1210 UDP-glucose pyrophosphorylase + Term 283277 - 283319 11.4 - Term 283265 - 283307 11.4 283 145 Op 1 4/0.000 - CDS 283311 - 283982 804 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 284 145 Op 2 1/0.341 - CDS 283979 - 284506 519 ## COG0212 5-formyltetrahydrofolate cyclo-ligase - Prom 284541 - 284600 3.5 - Term 284740 - 284777 3.2 285 146 Tu 1 . - CDS 284790 - 285920 1168 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 285968 - 286027 5.9 - Term 286377 - 286417 2.1 286 147 Tu 1 . - CDS 286423 - 287121 1170 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase - Prom 287287 - 287346 11.0 - Term 287327 - 287363 4.1 287 148 Tu 1 . - CDS 287372 - 288007 879 ## SDEG_2141 hypothetical protein - Term 288079 - 288106 -0.8 288 149 Tu 1 . - CDS 288131 - 289480 1868 ## COG0166 Glucose-6-phosphate isomerase + Prom 289434 - 289493 3.9 289 150 Tu 1 . + CDS 289528 - 289716 85 ## + Term 289763 - 289801 0.0 - Term 289749 - 289789 5.0 290 151 Op 1 . - CDS 289919 - 290389 663 ## COG0590 Cytosine/adenosine deaminases 291 151 Op 2 1/0.341 - CDS 290425 - 291201 1134 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 292 151 Op 3 1/0.341 - CDS 291261 - 291791 617 ## COG1268 Uncharacterized conserved protein 293 151 Op 4 1/0.341 - CDS 291795 - 292097 73 ## COG4357 Uncharacterized conserved protein - Prom 292146 - 292205 7.0 - Term 292181 - 292220 6.1 294 152 Tu 1 . - CDS 292229 - 293371 1446 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase - Prom 293575 - 293634 6.5 + Prom 293544 - 293603 6.6 295 153 Tu 1 . + CDS 293641 - 294399 1004 ## COG5523 Predicted integral membrane protein + Term 294409 - 294443 1.5 - Term 294397 - 294431 5.3 296 154 Tu 1 . - CDS 294475 - 294972 660 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 294997 - 295056 9.2 + Prom 295144 - 295203 6.8 297 155 Op 1 . + CDS 295243 - 295779 764 ## COG3479 Phenolic acid decarboxylase 298 155 Op 2 . + CDS 295844 - 296398 576 ## COG1695 Predicted transcriptional regulators - Term 296374 - 296430 10.1 299 156 Tu 1 . - CDS 296436 - 296858 503 ## COG1832 Predicted CoA-binding protein - Prom 296884 - 296943 6.2 - Term 297108 - 297137 -0.3 300 157 Tu 1 . - CDS 297227 - 299863 2927 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Prom 299954 - 300013 5.3 - Term 300210 - 300242 1.1 301 158 Tu 1 . - CDS 300248 - 301192 702 ## COG0679 Predicted permeases - Prom 301216 - 301275 4.8 302 159 Op 1 . - CDS 301363 - 302385 623 ## BCAH187_A5266 transcriptional regulator, ArsR family 303 159 Op 2 . - CDS 302406 - 303326 376 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 304 159 Op 3 . - CDS 303313 - 304083 399 ## COG1085 Galactose-1-phosphate uridylyltransferase 305 159 Op 4 . - CDS 304080 - 304910 425 ## Psyr_3066 hypothetical protein 306 159 Op 5 . - CDS 304907 - 305569 320 ## COG0684 Demethylmenaquinone methyltransferase 307 159 Op 6 . - CDS 305559 - 306662 731 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 308 159 Op 7 . - CDS 306659 - 307429 365 ## 309 159 Op 8 . - CDS 307392 - 308357 567 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 308432 - 308491 4.2 - Term 308581 - 308627 3.1 310 160 Tu 1 . - CDS 308683 - 310653 2499 ## COG0021 Transketolase - Prom 310686 - 310745 2.9 Predicted protein(s) >gi|304425484|gb|AEEM01000019.1| GENE 1 318 - 1229 662 303 aa, chain - ## HITS:1 COG:no KEGG:SSU05_0923 NR:ns ## KEGG: SSU05_0923 # Name: not_defined # Def: Tn916 hypothetical protein # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 303 8 310 310 555 100.0 1e-157 MKFRKNQNKEKQIPKEKKPRVYKVNPHKKVVIALWVLLGLSFSFAIFKHFTAIDTHTIHE TTIIEKEYVDTHHVENFVENFAKVYYSWEQSDKSIDNRMESLKGYLTDELQALNVDTVRK DIPVSSSVRGFQIWTVEPTGDNEFNVTYSVDQLITEGENTKTVHSAYIVSVYVDGSGNMV LVKNPTITNIPKKSSYKPKAIESEGTVDSITTNEINEFLTTFFKLYPTATASELSYYVND GILKPIGKEYIFQELVNPIHNRKDNQVTVSLTVEYIDQQTKATQVSQFDLVLEKNGSNWK IVK >gi|304425484|gb|AEEM01000019.1| GENE 2 1247 - 2248 769 333 aa, chain - ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 210 332 2 124 124 143 58.0 6e-34 MKLKTLVIGGSGLFLMVFSLLLFVAILFSDEQDSGISNIHYGGVNVSAEVLAHKPMVEKY AKEYGVEEYVNILLAIIQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGVKYFSELLA SSERLSVDLESVIQSYNYGGGFLGYVANRGNKYTFELAQSFSKEYSGGEKVSYPNPIAIP INGGWRYNYGNMFYVQLVTQYLVTTEFDDDTVQAIIDEALKYEGWRYVYGGASPTTSFDC SGLTQWTYGKAGINLPRTAQQQYDVTQHIPLSEAQAGDLVFFHSTYNAGSYITHVGIYLG NNRMFHAGDPIGYADLTSPYWQQHLVGAGRIKQ >gi|304425484|gb|AEEM01000019.1| GENE 3 2245 - 4356 770 703 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1206 NR:ns ## KEGG: HMPREF0868_1206 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 703 23 725 725 1293 100.0 0 MTVAFTLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPW NWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLA GVSANGFSTEGFYVGFLLLLILVLGVYVAYTGLIKRETTKAIHAIMNFVLVFILSASFIA YAPDYIKKINDFSSDISNASLSLGTKIVMPHSDSQGKDSVDLIRDSLFSIQVQQPWLLLQ YNSSDIESIGIDRVESLLSTSPDSNNGEDREKIVAEEIEDRSNTNLTITKTINRLGTVFF LFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAITKLFNTI LTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIVTFAGIYFKLGDLMSMFSLQSND SQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTTLGAGSAIVTGKKGQSGSGSSARTQADH SRPDGKEKSTLGKRIGQTIGTVADTKDRMVDTASGLKEQVKDLPTNARYAVYQGKSKVKE NVRDLTSSISQTKADRASGRKEQQEQRRKTIAKRRSEMEQVKQKKQPASSVHERPTTRQE QYHDEQTSKQSNIQTSYKESQQAKQERPAVKSDFSSPKVERQGNTVQEKTVQKPATSTTT ADRTSQRPITKERPSTVQRVPLQNTRSRPPIKTATIKKVGKKP >gi|304425484|gb|AEEM01000019.1| GENE 4 4425 - 6872 1210 815 aa, chain - ## HITS:1 COG:no KEGG:SPCG_0166 NR:ns ## KEGG: SPCG_0166 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 815 18 832 832 1585 100.0 0 MAYPIKYIENNLVWNKDGECYAYYELVPYNYSFLSPEQKIQVHDSFRQLIAQNRDGKIHA LQISTESSIRSAQERSKNEVTGKLKAVAYDKIDQQTDALISMIGENQVNYRFFIGFKLLL NDQEFSMKSLTVEAKNALSDFVYDVNHKLMGDFVSMSNDEILRFQKMEKLLENKISRRFK IRRLDKDDFGYLIEHLYGQTGTAYEEYEYHLSKKKLDNETLIKYYDLIKPTRCLVEEKQR YLKIQQEDETVYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANRKALS TVRNKKKELKDLDNHAWQSDNETSSNVAEALESVNELETNLDQSKESMYKLSYVVRVSAN DLDELKRRCNEVKDFYDDLSVKLVRPFGDMLGLHEEFLPASKRYMNDYIQYVTSDFLAGL GFGATQMLGENEGIYVGYSLDTGRNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFA NNLIVYYAVLYGAQAVIVDPKAERGRWKETLPEISHEINIVTLTSDEKNKGLLDPYVIMK NPKDSESLAIDILTFLTGISSRDGERFPILRKAIRAVTNSEVRGLMKVIEELRVENTPLS TSIADHIESFTDYDFAHLLFSNGYVEQSISLEKQLNIIQVADLVLPDKETSFEEYTTMEL LSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVY FVTQNTDDLLDEKLKNNLGLKFAFRSTDLNEIKKTLAFFGVDPEDENNQKRLRDLENGQC LISDLYGRVGVIQFHPVFEELLHAFDTRPPVRKEV >gi|304425484|gb|AEEM01000019.1| GENE 5 7337 - 7834 488 165 aa, chain - ## HITS:1 COG:no KEGG:SPG_1237 NR:ns ## KEGG: SPG_1237 # Name: not_defined # Def: Tn5251 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 165 1 165 165 295 100.0 5e-79 MDDMQVYIANLGKYNEGELVGAWFTFPIDFEEVKEKIGLNDEYEEYAIHDYELPFTVDEY TSIGELNRLWEMVSELPEELQSELSALLTHFSSIEELSEHQEDIIIHSDCDDMYDVARYY IEETGALGEVPASLQNYIDYQAYGRDLDLSGTFISTNHGIFEIVY >gi|304425484|gb|AEEM01000019.1| GENE 6 7951 - 8172 319 73 aa, chain - ## HITS:1 COG:no KEGG:SPG_1238 NR:ns ## KEGG: SPG_1238 # Name: not_defined # Def: Tn5251 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 73 1 73 73 103 100.0 2e-21 MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVK DILLELFNRIIGA >gi|304425484|gb|AEEM01000019.1| GENE 7 8215 - 9420 605 401 aa, chain - ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 68 386 25 340 352 241 41.0 1e-63 MEGFLLNEQTWLQHLKEKRLAYGLSQNRLAVATGITRQYLSDIETGKVKPSEDLQQSLWE ALERFNPDAPLEMLFDYVRIRFPTTDVQQVVENILQLKLSYFLHEDYGFYSYSEHYALGD IFVLCSHELDKGVLVELKGRGCRQFESYLLAQQRSWYEFFMDVLVAGGVMKRLDLAINDK TGILNIPVLTEKCQQEECISVFRSFKSYRSGELVRKEEKECMGNTLYIGSLQSEVYFCIY EKDYEQYKKNDIPIEDAEVKNRFEIRLKNERAYYAVRDLLVYDNPEHTAFKIINRYIRFV DKDDSKPRSDWKLNEEWAWFIGNNRERLKLTTKPEPYSFQRTLNWLSHQVAPTLKVAIKL DEINQTQVVKDILDHAKLTDRHKQILKQQSVKEQDVITTKK >gi|304425484|gb|AEEM01000019.1| GENE 8 9598 - 10584 517 328 aa, chain - ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 1 322 140 461 480 363 55.0 1e-100 MYYRLKNGLIQIRVEITLGKYQDQLLHLEKKLESGLYCELTDKELKDSYVEYTLLYDTIA SRISIDEVEAKDGKLRLMKNVWWEYDKLPHMLIAGGTGGGKTYFILTLIEALLHTDSKLY ILDPKNADLADLGSVMANVYYRKEDLLSCIETFYEEMMKRSEEMKQMKNYKTGKNYAYLG LPAHFLIFDEYVAFMEMLGTKENTAVMNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGI RDQFNFRVALGRMSEMGYGMMFGSDVQKDFFLKRIKGRGYVDVGTSVISEFYTPLVPKGY DFLEEIKKLSNSRQSTQATCEAEVAGVD >gi|304425484|gb|AEEM01000019.1| GENE 9 11012 - 11395 503 127 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1214 NR:ns ## KEGG: HMPREF0868_1214 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 127 2 128 128 227 100.0 9e-59 MRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSI PASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAK KEPTQDK >gi|304425484|gb|AEEM01000019.1| GENE 10 11414 - 11728 254 104 aa, chain - ## HITS:1 COG:no KEGG:SPH_1425 NR:ns ## KEGG: SPH_1425 # Name: not_defined # Def: conjugative transposon protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 104 1 104 104 203 100.0 1e-51 MELKFVIPNMEKTFGNLEFAGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAE AGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE >gi|304425484|gb|AEEM01000019.1| GENE 11 12080 - 12616 612 178 aa, chain - ## HITS:1 COG:SPy0334 KEGG:ns NR:ns ## COG: SPy0334 COG1399 # Protein_GI_number: 15674493 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 178 1 178 178 187 52.0 7e-48 MMFSISEIKKNPDGINFNSVLEIKEKLIERNKDVLDVKGIFVQGTISYDDGLYLLNYTLD YTITLPSSRSMLPVDVHQVEEVSEIFIEAVDIHAKEDLVRENLVLVLEEDYIDLEESAID NILLTIPMQVLSEEEQNSDTMPSGNSWSVLTEEQYDALQDKKKKENNPFSALNGLFED >gi|304425484|gb|AEEM01000019.1| GENE 12 12758 - 13660 1023 300 aa, chain - ## HITS:1 COG:SPy0331 KEGG:ns NR:ns ## COG: SPy0331 COG0501 # Protein_GI_number: 15674492 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 298 298 387 73.0 1e-107 MLYDQISSNKRRTVVLILVFFLILSAIGAAVGYLWLDSLEFGVVIALIIGGIYAASMIFQ STNVVMSMNNAREVSEEEAPELYHIVEDMAMVAQIPMPRVFIVEDDSLNAFATGSSPENA AVAATTGLLAVMNREELEGVIGHEVSHIRNYDIRISTIAVALASAVTLIASIGSRMMWFG GGGNRRRSNNRDEGGLGILMLLFSILSLILAPLAATLVQLAISRQREYLADASSVELTRN PEGMIKALQKLEQSSPMHHPVDEASAALYINDPIKKEERTTSLFNTHPSISDRIERLRQM >gi|304425484|gb|AEEM01000019.1| GENE 13 13787 - 14338 713 183 aa, chain - ## HITS:1 COG:SP1284 KEGG:ns NR:ns ## COG: SP1284 COG1704 # Protein_GI_number: 15901144 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 181 1 181 186 252 69.0 3e-67 MIFVIIAIIVVLVLWIIAVYNGLVKSRMQTKESWSQIDVQLKRRNDLIPNLIETVKGYAA YEEKTFAKITELRSQVAQAETPAEAMHASNALTKQLSSLIAVAENYPELKANNSFIKLQD ELTNTENKISYSRQLFNTTTANYNVKLETFPSNIIAGMFGFKPSQFLETPEDEKETPKVS FDF >gi|304425484|gb|AEEM01000019.1| GENE 14 14581 - 14679 75 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTYIGIERILEKVVVVCVLQTANAFFTDNHDT >gi|304425484|gb|AEEM01000019.1| GENE 15 14669 - 15382 716 237 aa, chain + ## HITS:1 COG:SP1285 KEGG:ns NR:ns ## COG: SP1285 COG0357 # Protein_GI_number: 15901145 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Streptococcus pneumoniae TIGR4 # 1 237 1 237 237 359 75.0 3e-99 MTPEEFYKKLSQQGFELTDTQKKQFERYFELLVEWNQKINLTAITDEEGVYLKHFYDSIA PVLQGKITNQAIRLLDIGAGAGFPSIPIKILCPDIDVTIIDSLNKRINFLNLLADELGLK GVHFYHGRAEDFGQDKHFRASYDIVTARAVARLQVLTELTIPFLKVGGQLIALKASAAEE ELADAKNAMTILFSKLIDNYHYELPNGDSRQITILEKKKETPNKYPRKAGMPNKKPL >gi|304425484|gb|AEEM01000019.1| GENE 16 15452 - 16825 1161 457 aa, chain + ## HITS:1 COG:SPy0327 KEGG:ns NR:ns ## COG: SPy0327 COG0168 # Protein_GI_number: 15674489 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Streptococcus pyogenes M1 GAS # 3 457 9 463 463 546 67.0 1e-155 MNSIFKSLTSTRRLTFSFVIVIFIGSLLLSLPIVHYADAPSTTYLDHLFNVVSMVCVTGL SVVPVASVYNGLGQVIAMCLMQIGGLGLVTLIAISTYLLRRRMNLSEQSLLQSALSYDNN NDLRHYLFHAYKITFIIESLVAIVLLFDFIPRFGLWHGIFNAIFLAVSAFCNAGFDNFGD ASLKQFVLNPLVNVAIAAAIISGGIGFAVWMDLKKAIKHFIKDKPYRFSAFSRSLSNQTR LVLATTGILLLLGTALTWLIEFKNAKTIGHYTIFRQIMVCFFQSVTMRTAGFATISYLDT HSATNILYMIQMIIGGAPGGTAGGVKVTTVAIAFLLFKSELAGQNEVTFRHRVIANKVIK QTLTVLIFFFTILIIGYLLLLEFEPNHDPLALLFEAISAIATVGVSMDLTPKLSQAGRFV IMALMFIGRVGPITVLLSLLQKKEKDIRYAQTNINVG >gi|304425484|gb|AEEM01000019.1| GENE 17 16837 - 17508 749 223 aa, chain + ## HITS:1 COG:SPy0326 KEGG:ns NR:ns ## COG: SPy0326 COG0569 # Protein_GI_number: 15674488 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pyogenes M1 GAS # 1 223 2 224 224 306 69.0 2e-83 MTKKIFGVLGLGIFGRTVVEELSKFEQEVIALDRHENLVQDVADMATKAAVGDITEIEFL KAVGIAQCDVVVIATGNTLESSVLAIMHCKKLGVKTILAKAKNATYEEVLYGIGATKVIT PERDSGKRVASNMLRHHIENIIHIEDNIAMIEFSIPDSWIGKSLVQLDLRHKYDLNLIGI RKKSTSSLDTHINPNQAFEANTEVVAIANDNTFEKFDYLGYLK >gi|304425484|gb|AEEM01000019.1| GENE 18 17561 - 18391 831 276 aa, chain - ## HITS:1 COG:SP0484 KEGG:ns NR:ns ## COG: SP0484 COG0619 # Protein_GI_number: 15900399 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 275 1 275 276 331 63.0 8e-91 MASHLIGYQSGRGFLYQLSGASKLIFFVLVSVACMTTYDTRLIAAIGIASLVLFKIAGIR WQQVSFVVKFIGFFALLNVVMVYLFAPNYGETIYGTKTVLLQGYGRFYLTSQELFYLFNL ALKYFCTVPLAVLFLITTQPSQFASSLNQIGVPYKVAYAVSLTLRYIPDVQEEFYMIRMS QEARGLELSQKEKLMKRIKGNLQIVIPLIFSSLERIDTVSTAMELRRFGKNKKRTWYTYQ KFTTADLLTIAIAVLLVIISLWLFHLNQGRFYNPWH >gi|304425484|gb|AEEM01000019.1| GENE 19 18384 - 20060 333 558 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 299 538 134 375 398 132 33 1e-29 MKPFIQFKDFTFKYDVQAEPTLKSLNLTIEKGQKVLIIGPSGSGKSTIGHCLNGIIPNIY HGEKSGQFTINGKEAFGLSIYDKSHLVSTVLQDPDGQFIGLTVAEDLAFALENDCVSLEE MQEKVAHWAKRLDLTEFLENRPQDLSGGQKQRVSLAGVLIDESPILLFDEPLANLDPKSG QETIDLIDRIHHEEKATTIIIEHRLEDVLYRHVDKVVLVNDGQILFDGHPDELLRTELLI QNGIREPLYVTALKDLGVDVTLMEHLSDLSQVDLTNIAVTAPSSFQEEAPQDKLLTVEQL HFAYQENRPILKNINFEINQGERIAIVGKNGAGKSTLAKAICQFITPEGDIRYRGQSIMT DSIKERAEKIGYVLQNPNQMISQTMIFDEVALGLRLRGVDEQDVEKRVLETLKVCGLYEF RKWPISALSFGQKKRVTIASVLVMNPEIILLDEPTAGQDKRNYTEIMNFLNQLNKAGHTI IMITHDMQLMLEYSDRSIVVSNGEIIADCSPVALFNQNAILEKANLKKTSLFELAEKLAV DPIALTHYYIEKEGGIHG >gi|304425484|gb|AEEM01000019.1| GENE 20 20116 - 20664 715 182 aa, chain - ## HITS:1 COG:L123147 KEGG:ns NR:ns ## COG: L123147 COG4720 # Protein_GI_number: 15672306 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 182 1 182 182 212 63.0 2e-55 MKNNSIKTVVATGIGAALFIIIGTLINIPTPIPNTNIQLQYAVIALFAVIYGPTVGFFSG FIGHALKDALQYGSPWWTWVLVSGLIGLAIGLLAKKIDIEKSPLTAKDYVWFNGVQIIAN VVGWALIAPYGDILIYSEPASKVFAQGFLSALINSLTIAIGGSLLLAVYSKTRTQSGSLT KD >gi|304425484|gb|AEEM01000019.1| GENE 21 20661 - 21515 968 284 aa, chain - ## HITS:1 COG:SP0481 KEGG:ns NR:ns ## COG: SP0481 COG1912 # Protein_GI_number: 15900396 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 280 10 289 291 476 82.0 1e-134 MSNHLLVLQSDFGLVDGAVAAMVGVALQEEPTLKIHNLTHDITPYNIFEASYRLFQTVEY WPEGTTFVSVVDPGVGSKRKSVVALTENNQFIVTPDNGTLTYIKTHVGIKAVREISEVKN RRKNTEYSYTFHGRDVYAYTGAKLASGHISFEEVGPELPIEAVLELPVVETEILENAVRG AVDILDVRFGSLWTSIKREEFNTLSPEFGDRFEVTIFNNDMLVYQNQVTYGKSFADVRIG QPIIYINSLYRVGLAINQGSFAKAYNVGVGSNWRIEIKKLGVSL >gi|304425484|gb|AEEM01000019.1| GENE 22 21666 - 22892 1422 408 aa, chain - ## HITS:1 COG:SPy0324 KEGG:ns NR:ns ## COG: SPy0324 COG3633 # Protein_GI_number: 15674487 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Streptococcus pyogenes M1 GAS # 1 403 1 403 404 501 71.0 1e-141 MRHFISVWNRTSLIKRIIIGVILGLILGVAFPKLSGIGILGDLFVGGLKAVAPLLVFVLV ANALSQHEKGQKTNMSTVVGLYLVGTLAAALVAVLVNYIFPLKLTLDNVAESDLSAPEGV AEVFKDLLLKIVDNPVNAIASANYIGVLAWAVIFGLAMRNVSQQTKDLLQTMAEVTSQVV RWIINLAPFGILGLVFNTISDNGIGILANYGFLIVTLVGTMLFVALVVNPLIAFVMIRQN PYPLVLRCLKESGLTAFFTRSSAANIPVNMKLCEDLGLNKDTYSVSIPLGATINMAGAAI TINVLTLAAVNTLGISVDFPTAFLLSVISAVSACGASGVAGGSLLLIPVACSLFGISNDI AMQVVGVGFIVGVVQDSCETALNSSTDVLFTAVAEKSVWGKNKKAKHN >gi|304425484|gb|AEEM01000019.1| GENE 23 23227 - 24603 1236 458 aa, chain + ## HITS:1 COG:SPy0323 KEGG:ns NR:ns ## COG: SPy0323 COG1114 # Protein_GI_number: 15674486 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Streptococcus pyogenes M1 GAS # 5 455 4 454 456 526 67.0 1e-149 MKPFKNIYVIIGFMLFALFFGAGNLIYPAFLGIYSGSNLALAILGFCLTGVTLPLLGVVA VAYSGASDVEDFARPVSRHYALLFSIALYLSIGPFFAIPRTGATSFSIGIQPILGDSIGV KIAYGLLFFGLSYILAIKPSKIADRIGKYLTPALLIILAILVIASFIKPAGDIGTAYNAA NDISNAFKDVPFVAGLIQGYGTMDALASLAFAIIVIDASKQHGAKNQSEVALLTFKSGII ATVLLALIYIFVARIGATSQSLFTFTDRHFTFNGAAIDGGNVLGQAAYFYLGSIGRAVLA AAIFLACLTTATGLITACAEYFHKLQPKLSHVAWASIFTLIALFFYFGGLSELIKWSLPV LYLLYPLTVVIVLLVLLAKFFNNSPIVYRLTIGFTVIPALYDAFSTLSTMTGLFTLPTSL VEFFTTIVPFGQFSMGWISFAIIGFIIGMMIHKFKTVN >gi|304425484|gb|AEEM01000019.1| GENE 24 24640 - 25521 626 293 aa, chain - ## HITS:1 COG:SA0315 KEGG:ns NR:ns ## COG: SA0315 COG0846 # Protein_GI_number: 15926028 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Staphylococcus aureus N315 # 9 275 18 285 315 233 41.0 3e-61 MKKSTKDYSEQINDIVKKLEKADAVLIGIGAGLSASAGLTYYGERFDNYFSDFKEKYGIE DMYSGGFYPFATKEEYWAWWSRHIFINRYEAPVGQPYIDLLDIVKHKDYFILSTNVDHQV QKAGFDKKRLFYTQGDYGLMQCSVPCHYTNYDNKDLIYQMVGSEKEMKIPSNLIPTCPRC GAPMTNNLRIDNRFVEDEGWHKAQKRYSEFLEKNNKKTIIYLELGVGMNTPGIIKYPFMQ MTYANPKATFITLNQETFKYPDELSKQLIQLDGDIGKNLQAIRQKIESGAISN >gi|304425484|gb|AEEM01000019.1| GENE 25 25484 - 26263 577 259 aa, chain - ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 6 256 10 261 266 246 50.0 2e-65 MNQAQRRLYLIKVLLSERAEFADIIIPDEVEQQKVLLRALINVRPPETVSAEFLDIQNAY LQEELTQKTVIKLTDLTPISGQLYLWNGDITTLKVDGIVNAANSQLLGCFYPNHKCIDNA IHTFAGVQLRQECYRLMKEQGHLEKTGEAKITPAYNLPSQYVLHTVGPIVDGRLLSKHEK DLISSYRSCLELADANGLKSLAFCCISTGEFHFPHERAAELAVATVQEYLKETDSKMKVV FNVFKEEDEKIYKRLLGAN >gi|304425484|gb|AEEM01000019.1| GENE 26 26366 - 27001 994 211 aa, chain - ## HITS:1 COG:SP1627 KEGG:ns NR:ns ## COG: SP1627 COG2910 # Protein_GI_number: 15901463 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Streptococcus pneumoniae TIGR4 # 3 211 2 209 209 238 55.0 5e-63 MSKVAVISSNGRVARLIIEELVRRGYDVTGFSREETNASKAQTYIQKDLFDITKEDVADF EVVVSAFGTWAPETLHLHVEVINHLSDIMANSDARFVVVGGAGSLYVDPELTVQLVDTPD FPKEYYALAKAQTDALDVLRKRNDVKWTFVSPAGDFQADGERTGEYILGGEQLTLNSRGE SIISYADYALGFADEIEKGNHIQERISLVRK >gi|304425484|gb|AEEM01000019.1| GENE 27 27181 - 27621 390 146 aa, chain + ## HITS:1 COG:SP1636 KEGG:ns NR:ns ## COG: SP1636 COG1959 # Protein_GI_number: 15901472 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 141 1 143 145 99 38.0 2e-21 MSYSTRLATSVHILLAIHHFENKEKVTSTFLANSIQTNPVIVRNLLGKLQKAGLVKVEAG IGGAHLTKQPEDLTLWDIFLAVEDSNKTIFKPHDDTNPNCEVGRVVHSVLDPRLNEIHNQ FLQSLKTISLASLITDMDNKIAQNNH >gi|304425484|gb|AEEM01000019.1| GENE 28 27653 - 28345 884 230 aa, chain - ## HITS:1 COG:SP0152 KEGG:ns NR:ns ## COG: SP0152 COG2011 # Protein_GI_number: 15900090 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 230 1 230 230 234 66.0 9e-62 MIEWIETNLPNVYRIGWEGTNSWSDAFSATLYMTGWSFVIGGILGLLMGLFLVLTGPNGV LSNRIGFKILDIFTSIVRAIPFIILLAILKGFTYAIVGTNLGRTAALIPLSAATFAFYAR QVQVVFSEMDRGVIEAAQASGATLWDIIKIYLSEGLPELIRVSTVTLISLIGETAMAGAI GAGGLGYIAIYYGYNRSATDVTIVATICILILVFIIQFIGDFLTKKLSHK >gi|304425484|gb|AEEM01000019.1| GENE 29 28346 - 29410 1288 354 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 354 1 354 354 518 78.0 1e-147 MTKPIINLEHIDITFYQKKREIEAVKDVSITIDKGEIYGIVGYSGAGKSTLVRTINLLQA PTSGKITIGDDVTFDNGKVQLKGAALRQKRQKIGMIFQHFNLMAQKTARQNVAFALRHSK LSKEEKDKKVADLLELVGLSDRAENYPAQLSGGQKQRVAIARALANDPEILISDESTSAL DPKTTKQILALLQDLNQKLGLTVVMITHEMQIVKDICHRVAVMQNGHLIEEGSVLDIFSN PKEPLTQEFIKTATGIDEALVKIEKQALVQHLPKDDLLVQLKYAGTSTDEPILNQIYKQF EVTANILYGNIEILDDTPVGEMIVVLSGEADALAAAQTAILEDGIELTVLKRGA >gi|304425484|gb|AEEM01000019.1| GENE 30 29391 - 30773 1296 460 aa, chain - ## HITS:1 COG:SP0150 KEGG:ns NR:ns ## COG: SP0150 COG0624 # Protein_GI_number: 15900088 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Streptococcus pneumoniae TIGR4 # 4 456 5 457 457 632 66.0 0 MVVSDNNQLQKFENDDVAQYYFEILHQLIAKKSIFAQQIGLAEVANYLGDIFTEAGAEVT IDDTCTAPFVLARFKSNRPDAQTIIFYNHYDTVPADDDQPWSSNPFELTVRDGYMYGRGV DDDKGHITARLTAVQKYRREFGDFPVNIIFIMEGSEESASVGLETYLEKYADELRGADLL VWEQGISNAKGQIEISGGTKGIVTFDMIVDSAKVDIHSKFGAVIESASWYLLNAIASLRD ETGRILVDGIYDQVIEPSERELSLILEHANLDADNLKTLYGLNLPMLTRNKEKLVRTLFF EPAITIEGISTGYQGQGVKTILPAKAQAKMEVRLVPGLEPKDVLQKIEQHLQQHGFEQVE LVYTLGEKAYRSDMSAPAILNVIEIAKAFSPNGVSVLPTTAGTGPMHQFFEALEVPIASF GIGNPDSRDHAGDENVNLADYYTHIEMIEELIKSYDKTDY >gi|304425484|gb|AEEM01000019.1| GENE 31 30983 - 31882 1202 299 aa, chain - ## HITS:1 COG:SPy0319 KEGG:ns NR:ns ## COG: SPy0319 COG1464 # Protein_GI_number: 15674483 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 281 281 294 57.0 1e-79 MKLKKLFGLASVAFASTVLLAACGSSSSSSSSDDTTLKVGIMTLDDATEPLWDKVKELAE DKGVKIELVEFTDYNQPNEALQNGEIDVNAFQHKYFLSNWNSENDGTLVEVADTLLSPIR LFSGTDSDGDAKYTDVSDIPDKGTISIPNDASNESRALYLLQSAGLIELDVSGDELATIK NISSNPKNLDIKEVDAAQTASTLTSVDAAVINNSYAQSADVDYDTTLYKEAVDENSNQWI NVIAAQKGWKKSDKADAIKTLVSVYQTDEVGKIIEEASEGADIPAWDGATTSSSSSDDD >gi|304425484|gb|AEEM01000019.1| GENE 32 31996 - 32838 966 280 aa, chain - ## HITS:1 COG:SPy0317 KEGG:ns NR:ns ## COG: SPy0317 COG0834 # Protein_GI_number: 15674482 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 3 280 2 280 280 375 72.0 1e-104 MTLMKKILGVTGVALASTTFLAACSSSSSSSSSSSGKEEVVFATVGTTAPFSYEEDGELT GYDIEVAKAVFKDSDKYEVTFKKTEWSSIFTGLDSGKYQMGGNNISYTEERSAKYLFSYP IGSTPSVLVVPNDSDITSYDDIGGHSTQVVQGTTTAAQLEEYNEENADNTVDINYTNENI TQILTNLNDGKYDFKIFDAPTVNSVIKNQSLDNLKTIDLESEEQPYIYFIFGQDQEDLQE FVNKRLKELQEDGTLTELAEKYLGGDYTPSADYLKVPTSD >gi|304425484|gb|AEEM01000019.1| GENE 33 32958 - 34103 1130 381 aa, chain - ## HITS:1 COG:L182020 KEGG:ns NR:ns ## COG: L182020 COG1473 # Protein_GI_number: 15672938 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Lactococcus lactis # 5 377 6 379 379 365 49.0 1e-100 MTAELYEKLTKIRRDIHQHPEVSEREFNTTEFLKNHISNLGIRIVETDLKTGFIAEIGQG EPIIALRADIDALPIREANTFDYASKNGAMHACGHDFHQTSLLGAAELLKAKEADIKGTI RLIFQPAEEVATGADAVIEAGGIEGVSAIIGYHNNPHLKPGQIGLRSKAIMAAVEKFKVT VTGVSGHAARPDFGIDTILTITTIVNNLQAIISRTVSPFDAAVLSVTHIDAGTTWNVLPD SGYFEGTIRSFTPENRQHLRERFTKIVKNTAEQFGAKVTIEWGKTPTVTYNDETLTPLIF EHSKQFAEVLEVAPLTGGEDFATYQEHIPGVFALIGSNGDNNAADLHHDTFTVKDEALPT AVNYYVQNALYLLDYYRSKKD >gi|304425484|gb|AEEM01000019.1| GENE 34 34100 - 34897 649 265 aa, chain - ## HITS:1 COG:SP0620 KEGG:ns NR:ns ## COG: SP0620 COG0834 # Protein_GI_number: 15900528 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 22 262 27 266 266 295 60.0 9e-80 MKKVLLGLAVLLSASLSVCVEAADKKAVVATAGDIKPFSYQNKKGQLTGYDIQVIKAASK YINGYKIGFKKTAWDSIFVGLDSDIYQVAANNLSYTEERANKYLYSVPIAKNPLVLVVKK GSKITSLDDIGGKTTQDDTGTSTAKFVDDWNSQHSDNPSTIDYSGEDVTKRLLDLDDGEF DYLIFDKISVETIIKQKNLDLTVIELNTDDNPNNYIIFSSDSKQLQTAFNKAVKKLYNNG TLEKLSQKYLGGSYLPEASALEVSK >gi|304425484|gb|AEEM01000019.1| GENE 35 34958 - 35644 996 228 aa, chain - ## HITS:1 COG:SP1089 KEGG:ns NR:ns ## COG: SP1089 COG2071 # Protein_GI_number: 15900957 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 228 1 229 229 240 52.0 1e-63 MKQVIVGITGNIKEMPAMSGMHFDAVSRHLSDGVKVAGGVPIIIPVGTPDLAKTYISMID KLVLSGGQNVTPEFYGEEKEVDSDDYSLERDEFEFALVKEAIRQNKPIFAVCRGMQLLNV ALGGTLNQKVDNHWQDDISGTSHEVEILPNSRVSHLVKSGSWINSFHHQSVKDLAPNLIA TARDVRDGTIEAYESKHGAPILGIQWHPELLLEKSESRLLFNYLVKTL >gi|304425484|gb|AEEM01000019.1| GENE 36 35833 - 36549 1117 238 aa, chain - ## HITS:1 COG:SPy0316 KEGG:ns NR:ns ## COG: SPy0316 COG0217 # Protein_GI_number: 15674481 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 238 1 238 238 392 88.0 1e-109 MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGEPDPESNSALKFVLERAKQAQVP KHVIDRAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANLRTAFGKNGGN MGASGSVSYMFDKKGVIVFDGDDADSVFEQLLEADVDVEDVEAEDGVVTVYTAPTDLHKG IEALRANGIEEFKVTELEMIPQSEVTLEGEDLEVFEKLVDVLEDDEDVQKVYHNVSDF >gi|304425484|gb|AEEM01000019.1| GENE 37 36784 - 38160 1143 458 aa, chain - ## HITS:1 COG:SPy0572_2 KEGG:ns NR:ns ## COG: SPy0572_2 COG1263 # Protein_GI_number: 15674662 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 92 449 6 364 364 253 39.0 5e-67 MDYGKVAKGILQYVGGKENVIFATHCVTRLRLTLKDRTKADTNKIKGIEGVLGVVDGDAQ YQVIIGQEVNNVYNAFIKLTGEFKKSESTPKADEKKETWWSRLLDILAGIFTPIMPIIAG AGMLKALLSILTLFNWIDIEGNTYYFLTFIADASYYFLPIFLANSAAKKFHTNNYMAMLM GAILLHPNFSALSETGDYVSVLGLPVKIVTYSSSVIPIILIVFVLSYVEKWVDKITPATI KFIARPILTILIMTPLAFVALGPLGSLVGDGLVNGLLAIEKIAPWIMPTVIGAFMPFLVM TGMHYSLLPAYVSSLSSLGYETIIGPGNLPSNIAQGAAALCVALKTKNKKFKQLAVSSGI TALLGVTEPALFGVNLKLRKPLIATTIGGGLGGLYAGLTGVMRFGGGGAGLAALGLYVGD DPMNLINAIISAAIAFVVTFVILWKIGFEDSIEVPNEN >gi|304425484|gb|AEEM01000019.1| GENE 38 38176 - 39582 1054 468 aa, chain - ## HITS:1 COG:SP0303 KEGG:ns NR:ns ## COG: SP0303 COG2723 # Protein_GI_number: 15900236 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 6 461 9 474 478 533 56.0 1e-151 MDKRILWGGATAANQYEGAFNLDGKGLSIADVEMGSKHGVPREVHSDIKEGFYYPSHEAI DFYHRYKEDIALFAEMGFTCFRMSINWTRIFPQGDELEPNEAGLAFYDKVFDELLSYGIQ PIVTLSHYETPLHLVKTYGSWRSRELITFFERFCRVVFERYKDKVTYWMTFNEINEIMNQ DEPYHQAGILFEEGENRNLTKVLASHHMFLASARAVLVGHEINPNFKIGCMLQYPTTYPK HCKPEDVLAQRYHMMPNFYYSDVMSKGEYTNLCQAQLKRLGVSFNISESDRKLLKAGKVD YIALSYYFSSVASLDENGQLLVERSNPYLERNDWDWPIDPIGLRIALNELYDRYQKPLFV VENGLGAIDQFNADGEIIDTYRMTYLGNHINELKKAISEDFVDVIGYTCWGPIDIISVGT GEMRKRYGFIYVDKDDTGKGSLRRIKKASFNWYKKVIASNGNDTSINE >gi|304425484|gb|AEEM01000019.1| GENE 39 39769 - 40644 285 291 aa, chain - ## HITS:1 COG:lin2846 KEGG:ns NR:ns ## COG: lin2846 COG1737 # Protein_GI_number: 16801906 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Listeria innocua # 1 279 1 278 283 114 26.0 3e-25 MLIIERLINQSEFTSSEKGVAQYLYSIGLDSQEMSTRTIAEATYTSAATVVRLCKKLGFS GFEEFKEKYCQEINYLNTQTGKLDINFPFQKGENLSQISNKLVKLYEDTVNDTLFILDQR MLNRAVTILRMSKTIHVFSYGTSLNIAESFREKMLKIGRNVQITNNLNYQIYEASCLEKG DVAILISYSGETEKMLQIAELCQQVNVPMILLSSLGENSLSSYSSCKLTISSKESLVQNI GDFSTHLSVMFLLDALYSAYFLKDFDQHYDTKIKKAKKLEHIRSSSNRMIQ >gi|304425484|gb|AEEM01000019.1| GENE 40 40717 - 41547 905 276 aa, chain - ## HITS:1 COG:DR0011 KEGG:ns NR:ns ## COG: DR0011 COG0702 # Protein_GI_number: 15805052 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Deinococcus radiodurans # 3 276 8 285 293 125 32.0 1e-28 MTTLAITGVTGHLGGFVAKELSEAGVAARHLARSPERAPKLAGATVKKCSYEYSDEAIAA LSGIDVLFMISAKENPERLRQHRAFIDAAKAAGVKHIVYTSFYNASPSSTFTLARDHAAT EQYIKEKGLAYTFLRDNFYVDFFVDMARQYGEIKGPAGNGKVSAVVRSDVANVAVEILKN PEKWANQTLNMTGPEELTLSEMAEQISHSLGKTVTYVEETVEEAYDSRKIWQAEQWEYDS WVSTYTAIAKGEQAGLSDDIECVLGRRPKGLKEYLA >gi|304425484|gb|AEEM01000019.1| GENE 41 41665 - 42345 547 226 aa, chain - ## HITS:1 COG:CAC3475 KEGG:ns NR:ns ## COG: CAC3475 COG0789 # Protein_GI_number: 15896713 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 221 3 240 243 146 39.0 3e-35 MKTVKEMSQISGISVRTLHYYDQIGLLTPSFIGENGYRFYDMDAFERLQEILLFRELEFP LKKIKEILSDPSYDKEEALCEQIKWLELKKEHLEKVICHAKSLQENGGNMMTFTAYDKSE LEAYQAFEKNPQTDFSVITEEMAAIMRDFAKLKEHSLSDSKVQKQVETLQSYISEHFYPC DMEILSGLGQMYIADNRFTAFIDKAAGQGTASFVSSAIAEYVKNNG >gi|304425484|gb|AEEM01000019.1| GENE 42 42431 - 43525 968 364 aa, chain - ## HITS:1 COG:SP1742 KEGG:ns NR:ns ## COG: SP1742 COG1323 # Protein_GI_number: 15901574 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 362 1 362 365 510 65.0 1e-144 MTVTGIIAEFNPFHNGHKYLLSQAEGVKIVAMSGNFVQRGEPAIVDKWTRAEMALRNGAD LVVELPFLVAVQSADYFAQGAVDILERLGVDKLAFGTEENLDYQQFSQIYGDNQQKMVDY LQSLPDNLSYPQKTQKMWETFAGVNFTGNTPNHILGLSYAKACAGKAIQLTPIMRQGAGY HSLETETPFASATNLRVHRKDKAFVDKFMPNADLFLNASQVTWDDYFPLLKYQILTNADL TEIFQVNEELASRIRSAIRSVATVDELVDKVATKRYTKARVRRILAYILVGAVEKPLPGA VHVLGFTPKGQEHLKTVKKSVDIVARIGAKPWDVVTQQADQVYALGNPYIQEQNWGKVPV IINK >gi|304425484|gb|AEEM01000019.1| GENE 43 43618 - 44355 878 245 aa, chain - ## HITS:1 COG:SPy0312 KEGG:ns NR:ns ## COG: SPy0312 COG0500 # Protein_GI_number: 15674478 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 245 17 263 263 392 80.0 1e-109 MNKNYEKFASVYDAIMDDSLYDKWTDFSLRHFPKNKKKLLELACGTGIQSVRFAKAGFDV TGLDLSEDMLEIARKRAKAASEAIEFKQGNMLDLSQAGKYDLVTCYSDSICYMADEVEVG DVFKQVYDCLNEDGVFIFDVHSTYQTDTVFPGYSYHENAEEFAMVWDTYADEAPHSVVHE LTFFLQDEDGRFTRYDEVHEERTYEVLTYDILLEQAGFKSFKLYADFEDKKPRKKSNRWF FVCQK >gi|304425484|gb|AEEM01000019.1| GENE 44 44441 - 44794 547 117 aa, chain - ## HITS:1 COG:SPy0310 KEGG:ns NR:ns ## COG: SPy0310 COG0799 # Protein_GI_number: 15674477 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Streptococcus pyogenes M1 GAS # 1 117 9 125 125 156 71.0 1e-38 MDKKELLELVVKAADEKRAEDMVVLDLYGLTSVTDYFVVVSAMNTRQLDAIAENIREKVK EAGGDASHAEGDSRTGWVLLDLNDVVVHIFSEDERKHYNIEKLWHEAPMVDVSEYLA >gi|304425484|gb|AEEM01000019.1| GENE 45 44795 - 45307 316 170 aa, chain - ## HITS:1 COG:SP1745 KEGG:ns NR:ns ## COG: SP1745 COG1335 # Protein_GI_number: 15901577 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Streptococcus pneumoniae TIGR4 # 1 167 1 166 166 129 42.0 2e-30 MKTALLVVDIQTALIEAKPYAVDNCLSVWQKAIATCREKNIEVIYVRHNDDELLTGSRGW EIYEAIAPEVDEKIFDKHYNSAFKETHLQTYLDSQVIERLIIIGMATNYCIDTTVKVAFE FGYNLAVIKNGTTTFAEREITAEQLIQHYESTWNGRFAQVADLEEILKED >gi|304425484|gb|AEEM01000019.1| GENE 46 45304 - 45903 883 199 aa, chain - ## HITS:1 COG:SPy0309 KEGG:ns NR:ns ## COG: SPy0309 COG1713 # Protein_GI_number: 15674476 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 197 1 196 197 265 67.0 4e-71 MTYEAYTAGIERAELLGKVASVMSEKRFNHVLGVEKTAIELAERYGYDTEKAGLAGLIHD YAKEISDQEFLDLIDKYQLDPELKKWGNNVWHGMVGIYKIQEDLGVTDKEILRSIETHTV GSSDMSLLDKIVYVADYIEPNRRFPLVEEARVIAKESLDKAVAYETVHTVEHLAHQAFPI FPQTIETYNAYVGFMKDDK >gi|304425484|gb|AEEM01000019.1| GENE 47 45893 - 46531 629 212 aa, chain - ## HITS:1 COG:SP1747 KEGG:ns NR:ns ## COG: SP1747 COG1057 # Protein_GI_number: 15901579 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 209 1 209 209 346 82.0 2e-95 MALELLTPFTKVELEKKEKDKNRKQIGILGGNFNPVHNAHLVVADQVRQQLCLDKVFLMP EYEPPHVDKKNTIDEKHRLKMLELAIEGVDGLGIETIELERKGISYTYDTMKLLIEKNPD VDYYFIIGADMVDYLPKWYKIDELIKMVQFVGVQRPKYKAGTSYPVIWVDVPLMDISSSM IRHHFENGCRPNFLMPQAVIDYIEKEGLYHDL >gi|304425484|gb|AEEM01000019.1| GENE 48 46608 - 46922 456 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15674474|ref|NP_268648.1| hypothetical protein SPy_0307 [Streptococcus pyogenes M1 GAS] # 1 102 1 102 102 180 88 7e-44 MLTSKQRAFLKSQAHSMKPIVQIGKNGLNDQIKTSVRNALDARELIKVTLLQNTDEDIHE VAEILEDEIGCDTVLKIGRILILYKESSKKQNRKISPKVKELNQ >gi|304425484|gb|AEEM01000019.1| GENE 49 47063 - 48181 1047 372 aa, chain - ## HITS:1 COG:SPy0306 KEGG:ns NR:ns ## COG: SPy0306 COG1161 # Protein_GI_number: 15674473 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 372 1 372 372 660 83.0 0 MEELLCIGCGAKIQTEDKEKAGYTPKAALEKGLESGELYCQRCFRLRHYNEITDVHITDD EFLKLLHEVGDSDALVVNVVDIFDFNGSVIPGLPRFVSGNDVLLVGNKKDILPKSVKDSK VTQWLTERAHEEGLRPVDVILTSAQNHQAIKDLIEKIEKLRRGRDVYVVGVTNVGKSTLI NAIIKEITGEKDIITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLGDKNLKY ISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGFTAYFDNNLKLHRTKLAGADAFY DKHVGSLLTPPTDKELADFPKLVRHEFTIKAKMDVVYSGLGWIRIKASQDSPVKIAAWAP EGVAVLLRKALI >gi|304425484|gb|AEEM01000019.1| GENE 50 48181 - 48720 576 179 aa, chain - ## HITS:1 COG:SPy0305 KEGG:ns NR:ns ## COG: SPy0305 COG2179 # Protein_GI_number: 15674472 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 4 179 19 194 194 299 85.0 2e-81 MEKNLSIDDYRPTFVVEAVYDLRADDLLRRGIHAVLVDLDNTLIAWNNPDGTPEVRAWLD EMTMADISVVVVSNNKHSRVNRAVSRFGVDFVSRAMKPFTRGINMAIKRYGFDRGEVIMV GDQLMTDIRAAHRADIQSVLVKPLVTSDAWNTKINRWRERRVWAKLEEKYGKIQYQKGI >gi|304425484|gb|AEEM01000019.1| GENE 51 48835 - 50223 1363 462 aa, chain - ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 13 452 12 442 454 290 40.0 4e-78 MSEEKISPKVIRAIVGAGMLSFCGVVVETAMNITFPTLMTEFGINTSTVQWMTTIYLLVV ASVVPLSAYLKRSFKTKSVFLAANLLFILGVLIDAIAPSFAILLFGRVVQGIGVGIALPL MFNIILDQVPMSKIGAMMGVGTLITAVAPAVGPTFGGLVASNLGWRFIFVLLIPLLLVSL VLGVTSIEQKDEVVREKLDILSVIAILCAFIGLILGINNLADYDFLSLPVLGSLFVGIAG LIVLVKRSAQLAVPIVELSVLKNGKFAGHVVAFFLFQIVNLGLSFLIPNYVQLVNHSTST VAGLLVFPGAFIGACFAPFSGSILDRLGAKKPIIFGVSMLVFALCLYSIFGLHLSNAWLT IFYILSMGGTGIAFGNVMTSGQKQVALKERADANAIFNTLQQFAGAVGTTIASLIVALSQ TNSSLSYSAATAQGSRNAFIVLLILAAIELVILLRVVDGKEK >gi|304425484|gb|AEEM01000019.1| GENE 52 50232 - 50648 408 138 aa, chain - ## HITS:1 COG:L182006 KEGG:ns NR:ns ## COG: L182006 COG1846 # Protein_GI_number: 15673522 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 5 138 8 145 148 99 51.0 2e-21 MEKNIGRLVKKASNQLGREFDQFAKPFDLTGMQMSIIDFLSQGVKEEYFQQDIEKEFNIQ RSTTTVLLQRMEKKALIYRQVSQQDARQKSVHLTEKAQGLVEECRSYFRNQEKELEKNFS EEDIAIFEKILQYYMKEK >gi|304425484|gb|AEEM01000019.1| GENE 53 50794 - 51675 966 293 aa, chain - ## HITS:1 COG:SP1447 KEGG:ns NR:ns ## COG: SP1447 COG0697 # Protein_GI_number: 15901297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 285 10 294 298 246 53.0 3e-65 MVLMAGIAWGISGISGQYLMAHGMNINLLTSVRLIVSGLLLTAMAVISQPQHFFRAIKQP KVLGGIAVFAIIGLLMNQYAYLMAIHYTNAGTATVLQYVAPIIILAYVSLKNKQLPTLSE FFAILFAILGTFIIATHGHFDGLAMTPKGFFWGLFSAVTYSFYIVLPAKLIREFGSFTVI GLGMLMGGVVFPIVTRSWQYPLVLTSGNWLALFGIIIIGTVFAYTFFLKGTTIIGAVKGS LLAAIEPVSSVFFSVTIMHEIFYPMDFVGMIFIIVAVLTVSLRDLIAVRKQLH >gi|304425484|gb|AEEM01000019.1| GENE 54 51863 - 53305 2005 480 aa, chain - ## HITS:1 COG:SP0436 KEGG:ns NR:ns ## COG: SP0436 COG0064 # Protein_GI_number: 15900354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Streptococcus pneumoniae TIGR4 # 1 480 1 480 480 849 88.0 0 MNFETVIGLEVHVELNTNSKIFSPTSAHFGNEQNANTNVIDWSFPGVLPVMNKGVIDAGI KAALALNMDIHQNMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEIELEDGSTKKIRIE RAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYTG ISDVKMEEGSMRVDANISLRPYGQEEFGVKAELKNLNSFNNVRKGLIYEQKRQAQVLRSG GQIQQETRRYDESTGETILMRVKEGSSDYRYFPEPDLPLYEVSDEWIESVRKTLPEFPKD RRAKYVNEFGLTAYDAAQLTATKATSDFFESAVALGGDAKQVSNWLQGEVAQFLNSENKT LPEILLTPENLVEMLAIIADGTISSKIAKKVFVHLAKNGGSAREYVEKAGLVQISDPAVL IPIIHQVFEDNEAAVADFKSGKRNADKAFTGFLMKATKGKANPQVALKLLAQELAKLKED >gi|304425484|gb|AEEM01000019.1| GENE 55 53305 - 54771 390 488 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 15 471 16 452 468 154 28 3e-36 MSFNTKSIDELHNLLVNKEISAVELTKATLEDIKEREAAVDSFITVSEEAALAQAAAVDE KGIDADNVMSGIPLAVKDNISTRGILTTAASKMLYNYEPIFDATAVEKLYGKDMIVVGKT NMDEFAMGGSTETSYFKKTKNAWDHSKVPGGSSGGSAAAVASGQVRLALGSDTGGSIRQP AAFNGVVGLKPTYGRVSRFGLIAFGSSLDQIGPFSQTVKENAQLLNVIAGHDTKDATSSD REVADFTAKIGQDIKGMKIALPKEYLGEGIDPEVKETILKAAKHFEKLGATVEEVSLPHS KYGVAVYYIIASSEASSNLQRFDGIRYGYRTENYNNLEDIYVNTRSEGFGDEVKRRIMLG TFSLSSGYYDAYFKKAGQVRTLIIRDFEKIFADYDLILGPTAPSVAYDLDSLNHDPVAMY LADILTIPVNLAGLPGISIPAGFAQGLPVGMQLIGPKYSEETIYQAAAAFEATTDYHKQQ PIIFGGDK >gi|304425484|gb|AEEM01000019.1| GENE 56 54771 - 55073 593 100 aa, chain - ## HITS:1 COG:SP0438 KEGG:ns NR:ns ## COG: SP0438 COG0721 # Protein_GI_number: 15900356 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 100 1 100 100 132 79.0 1e-31 MKISEEEVRHVADLSKLSFSEEETAEFATTLSKIVDMVELLNEVDTEGVPVTTTMADRKT VMREDVAVAGDDRDELFKNVPQSENYYIKVPAILEDGGDA >gi|304425484|gb|AEEM01000019.1| GENE 57 55197 - 55745 783 182 aa, chain - ## HITS:1 COG:SP1583 KEGG:ns NR:ns ## COG: SP1583 COG1335 # Protein_GI_number: 15901425 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Streptococcus pneumoniae TIGR4 # 1 182 1 182 191 283 75.0 2e-76 MKKALISIDYTYDFVADDGKLTAGKPAQAIEEAITRVTKEAYEAGNYIFFAIDGHDEGDD FHPETKLFPPHNIKGTSGRDLYGQLADLYAEIKEDSKVFWLDKRHYSAFSGTDLDIRLRE RRVTTVVLTGVLTDICVLHTAIDAYNLGYDIEIPAEAVASLTEENHQFALNHLKNVLGAK IV >gi|304425484|gb|AEEM01000019.1| GENE 58 55745 - 56530 1073 261 aa, chain - ## HITS:1 COG:SPy1777 KEGG:ns NR:ns ## COG: SPy1777 COG4465 # Protein_GI_number: 15675618 # Func_class: K Transcription # Function: Pleiotropic transcriptional repressor # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 260 260 457 92.0 1e-128 MPNLLEKTRKITSILQRSVDSLDTELPYNTMAAQLADIIDCNACIINGGGNLLGYAMKYK TNTDRVEEFFDAKQFPESYVKAASRVYDTEANLSVDNELTIFPVESKDIYPDGLTTIAPI YGGGMRLGSLIIWRNDKEFLEDDLILVEIASTVVGIQLLNLQTENLEETIRKQTAVNMAI NTLSYSEMKAVSAILGELDGTEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLG MKGTYLKVINEGIFDKLKEYN >gi|304425484|gb|AEEM01000019.1| GENE 59 56743 - 57957 1418 404 aa, chain - ## HITS:1 COG:SP1994 KEGG:ns NR:ns ## COG: SP1994 COG0436 # Protein_GI_number: 15901817 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 404 1 404 404 728 84.0 0 MKIFDKSSKLEHVSYDIRGPILDEATRMIANGEKILRLNTGNPAEFGFTAPDEVIRDLIA NARNSEAYSDSKGIFSARKAIMQYCQLKGFPHVDIDDIYLGNGVSELISMSLQALLDDGD EVLVPMPDYPLWTACVSLAGGNAVHYLCDEKANWYPDIDDIKSKITSNTKAIVVINPNNP TGALYPDELLKEIVEIARQNDLIIFADEIYDRLVMDGKKHTAIASLAPDVFCVSMNGLSK SHRICGFRVGWMVLSGPKNNVKGYIEGLNMLANMRLCANVLGQHVVQTSLGGYQSVDELL IPGGRIYEQRNFIYKAVNEVPGLSAVKPDAGLYIFPKIDREMYQIDDDEQFCLELLKQEK VMLVPGKGFNWNEPDHFRIVYLPRVEELAEVQEKLTRVLNQYRR >gi|304425484|gb|AEEM01000019.1| GENE 60 57994 - 59760 1252 588 aa, chain - ## HITS:1 COG:SA0220_2 KEGG:ns NR:ns ## COG: SA0220_2 COG0584 # Protein_GI_number: 15925931 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Staphylococcus aureus N315 # 340 579 1 239 242 242 48.0 2e-63 MRKDMVAVLKDLYRHKYTYILRATILQLLITTVGAYVLSLLIRVVLVGSDIPGMTTDNIF SFLTNPLTLSVLVIYLFLLAFLVYLEFSLLVEIIRHKEAKLRLTWTRLKEDTIYFFKAIS GWHFLAFLAYLVLTIPFLNVMFSSALLENLYIPKFISGELLKTTNGKLLYYGLYLVLGYL NLRFLYTLPLTVTGKGERFGRNMATSWQLTRGKKIFKLFGLAIVLISVIAVVAVFSFLGI SLAALVDGADKSFWVETLFLSFVWGVLFAGRLLFKLASISYLLQVTENSSSTLAPANQGE RRHRLLALTGLILVIGGINYIYNVLKVSGEPVEHLEVIAHRGMVSQGVENSLEALEGAAN AGADYAEMDIILSKDQQFIVSHDDNLKRLTGKDITISQSNAKDVIGLKTSQNGYQSQIVS FEDYVAKAKQLGIKLLVELKPTGNEPANYEQLFVDKMKELGVEKSYMTMSADLKTIETVE KLDPTIKTGYTISLQIGNFTSQKVDFYAIEDFSYNELLARTAHKNGKKIYVWTINSTDDI EKYVETSTDGIITDYPDLVSDIEVYLANDNSYLDYFLRLTNLSWIENL >gi|304425484|gb|AEEM01000019.1| GENE 61 60084 - 60536 627 150 aa, chain + ## HITS:1 COG:SPy1780 KEGG:ns NR:ns ## COG: SPy1780 COG0589 # Protein_GI_number: 15675620 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 1 150 19 168 168 232 82.0 2e-61 MSHHYERILIAIDGSYESELAFEKGVNIALRNNAELLLTHVIDTRALQSVATFDTYIYEK LEQEAKDVLNDYEQQAREKGLTKVKQVIEFGNPKTLLARDIPDKEKVDLIMVGATGLNTF ERLLIGSSSEYIMRHAKVDLLVVRDSEKTF >gi|304425484|gb|AEEM01000019.1| GENE 62 60613 - 62016 1119 467 aa, chain - ## HITS:1 COG:SPy1781_1 KEGG:ns NR:ns ## COG: SPy1781_1 COG0561 # Protein_GI_number: 15675621 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 279 1 279 279 462 78.0 1e-130 MAIKAVFFDIDGTLLNDRKNVQQSTQKAIKSLKKQGIFVGLATGRGPSFVQPYLENLGLD FAVTYNGQYVFTRDQVLYHNQLPVSTIYRIIRYASDRRREISLGTASGLVGSRIIDMGTS RFGQVVSTIVPKRWAKAVERSFKHLIRRFKPQNLNNLLTIMRQPIYQIVLVATEGETDKI QEAFPYIKITRSSPYSADLISKEQSKIKGIERVGEMFGFELAEVMAFGDSDNDIEMLSGV GIGVAMGNAKSSVKKLAHYTTDSNNNDGISKALAHYGLIHFEVEESFESQDENFNKVKDF HHLMDGETCETPRLYGSEEATHRSDFKVEEIVEFLHAASKGNPEAFEKSISDLHAAIDKA VNKVRSKEHPETPLVGQVDALTDLLYLTYGSFVLMGVDPKPFFDTVHEANMGKIFPDGKA HFDPVTHKILKPDDWEERFAPEPAIKRELDRQIQKSLNRKKRNQASH >gi|304425484|gb|AEEM01000019.1| GENE 63 62087 - 63049 1285 320 aa, chain + ## HITS:1 COG:SP1998 KEGG:ns NR:ns ## COG: SP1998 COG0252 # Protein_GI_number: 15901821 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Streptococcus pneumoniae TIGR4 # 2 320 3 320 320 486 76.0 1e-137 MKKILVLHTGGTISMHADEAGNVRPDTDNPMNHVGVNLENIQVTALDFFNVPSPHITPKH MLKLYQEIKKNADNYDGIVITHGTDTLEETAYFLDTMEIPNIPIVLTGAMRSSNELGSDG VYNYLSALRVASHDQAIGKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPIHGPLGLITKH DILFFRTADPRVRFDLQDISGTVPIVKAYAGMGGDGIISFLNPSNVCGVVVEALGAGNVP PRAAQEIVDLIKQGVPVVLVSRCFNGIAEPVYAYEGGGVQLAKAGVMFVKELNAQKARLK LLIALNAGLKGQALKEYIEG >gi|304425484|gb|AEEM01000019.1| GENE 64 63114 - 63317 213 67 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 2 65 3 66 67 86 64 1e-15 MIRINLDVELAKRKMKSGELAERIGITNANLSILKTGKAKAVRLTTLNAICRELGCQPGD VLEYIPD >gi|304425484|gb|AEEM01000019.1| GENE 65 63330 - 63833 493 167 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1883 NR:ns ## KEGG: GALLO_1883 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 167 1 167 167 249 100.0 3e-65 MKKTNYKALKIANIFINIVIAVIVISTIIAIGLSVTQSHLALTNQVGNGIVFDINIPEKL LHSPAFIGLTVIVSALWIALLVWVKMFFQNIIDNRIFTQDNVKLARYVEYNFIALAFLDS WFQSLCSGSEVLNLVNVAYLVAAFVVWVFSMILKEANIIAEENEFTI >gi|304425484|gb|AEEM01000019.1| GENE 66 63864 - 64331 579 155 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1884 NR:ns ## KEGG: GALLO_1884 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 155 1 155 155 239 100.0 3e-62 MNTKTIENITKTVAKVAINLATILLALTIIADLVSHIYGYDTVHVGHYGVIDWSIGKETN TWLVTALNILTNSAIIYGLAKLKVFISEFTIKKVLTDKTYLFLKRATIYTFVASLLQNVL STSLNQANIIFDFSICGYILLVTLAVKYFRTRRLA >gi|304425484|gb|AEEM01000019.1| GENE 67 64676 - 64747 106 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVKVTYKKYFAKKIHVKPAYGK >gi|304425484|gb|AEEM01000019.1| GENE 68 64830 - 66845 2423 671 aa, chain - ## HITS:1 COG:SPy1785 KEGG:ns NR:ns ## COG: SPy1785 COG1200 # Protein_GI_number: 15675625 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Streptococcus pyogenes M1 GAS # 1 671 1 671 671 1069 79.0 0 MNLQSSIVELKGIGAKSAEKFYKLDIYTIEDLLLYYPFRYEDFKSKRVSELADGEKAVIT GTVVTPANVQYYGYKRNRLSFKIKQGEAVIAISFFNQPYLADKVELGSDIAIFGKWDALK SAVTGMKILAQVEDDMQPVYRVAQGISQNALVKAIKSAFEIGAQNWLPENLPQVLLDKYR LLGRAQATAAMHFPKDLAEYKQALRRIKFEELFYFQMNLQALKADNKSEANGLAIAYDEQ KVADKIAALPFTLTGGQRRSLDDILADMRSGGHMNRLLQGDVGSGKTVVASLAMYATYTA GFQSALMVPTEILAEQHFESLTQLFPALSIAILTSGMKTAAKQAALSAIADGSVDMIVGT HALIQDAVTYHRLGLVITDEQHRFGVNQRRVFREKGENPDVLMMTATPIPRTLAITAFGE MDVSIIDELPAGRKPIITRWVKHEQLEVVLDWVKKELQKGAQAYVISPLIEESESLDLKN AVALHEELSAYFADSATVALMHGRMKNDEKEAIMQDFKAQKSQVLVSTTVIEVGVNVPNA TIMIIMDADRFGLSQLHQLRGRVGRGDKQSYAILVANPKTQTGKERMKIMTETTDGFVLA EADLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARRVASQIVSEKDWQNNPQWQIV SQNLKDKGTFD >gi|304425484|gb|AEEM01000019.1| GENE 69 66931 - 68037 1275 368 aa, chain - ## HITS:1 COG:SPy1802 KEGG:ns NR:ns ## COG: SPy1802 COG0787 # Protein_GI_number: 15675637 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Streptococcus pyogenes M1 GAS # 1 366 1 366 366 503 66.0 1e-142 MISSLHRPTKAVIDLDAICQNIDAVKANIPQDKKAFAVVKANAYGHGATSVAQAIHHLVD GFCVSNIDEALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQEWLDLANEQGIS LAGLDVHLKVDSGMGRIGVRSLDEAENVIANLKKAGANVAGIFTHFATADEADDTKFNEQ LEFFTNLVNNLSDKPAIVHASNSATSIWHSETIFNLVRLGIVMYGLNPSGTELDLPYPLK PALSLESSLVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFSVLVNGE FCEIVGRVSMDQITIRLPEKLPIGTKVTLIGQEGSKAISATDLAQKRGTINYEVLCLLSD RIPRVYSK >gi|304425484|gb|AEEM01000019.1| GENE 70 68094 - 68453 242 119 aa, chain - ## HITS:1 COG:SPy1804 KEGG:ns NR:ns ## COG: SPy1804 COG0736 # Protein_GI_number: 15675638 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Streptococcus pyogenes M1 GAS # 1 117 1 116 118 154 62.0 3e-38 MIIGHGIDLQEIDAIKRAYEKNNRFAKRVLTDKEFQCFSEQKSTKRQMEFLAGRWAAKEA FAKAMGTGIGTLGFKDIEILNNQLGAPVITRSPFSGKCFISLSHTGNLVQASVILEDNS >gi|304425484|gb|AEEM01000019.1| GENE 71 68574 - 69629 1313 351 aa, chain - ## HITS:1 COG:SP1701 KEGG:ns NR:ns ## COG: SP1701 COG0722 # Protein_GI_number: 15901535 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Streptococcus pneumoniae TIGR4 # 6 341 6 341 343 542 77.0 1e-154 MGIHQKSAKIDIAQVKELSKLEGDFLAKKAARDAELAKIITGEDNRILLVIGPCSSDNEE AVLEYANRLAKLQEEVKDKIFIVMRVYTAKPRTNGDGYKGLMHQPDTSKLPDLINGIAAV RHLHYRVITETGLTTADEMLYPANLPLVDDLVSYHAIGARSVEDQEHRFVASGIDVPTGM KNPTSGNLNVMFNGIYAAQNKQNFIYHNAEVDTDGNPLAHAILRGATNEHGENEPNYYYD DLLKAIELYEKMGLENPFIVVDTNHDNSGKNYLEQIRIVRQTLINRDWNDKINKYVRGFM IESYLEDGRQDAPEVFGKSITDPCLGWEKTEQLIREIHATLSHDSFEELLF >gi|304425484|gb|AEEM01000019.1| GENE 72 69633 - 70664 1310 343 aa, chain - ## HITS:1 COG:SP1701 KEGG:ns NR:ns ## COG: SP1701 COG0722 # Protein_GI_number: 15901535 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 343 1 343 343 578 81.0 1e-165 MSFKATSKKINFDALKEESALTGDVLAKKEARDRELEAIIKGEDDRVLLVIGPCSSDNEE AVLEYAHRLAKLQEEVKDRVFMVMRVYTAKPRTNGDGYKGLMHQPDTSEAPSLINGIKAV RNLHYRVISETGLTTADEMLYPENLPLVDDLVSYIAIGARSVEDQQHRFVASGISVPTGM KNPTSGNLNVMFNGIYAAQNKQSFLFNGEEVETSGNPLAHAILRGATNEYGKNVPNYYYD NVIDTIEQYEKMGLENPFIVIDTNHDNSGKQYLEQVRIVRQTLINRDWNEKINKYVRGFM IESYLEDGRQDAPEVFGKSITDPCLGWENTAQLVHEIYDTLGK >gi|304425484|gb|AEEM01000019.1| GENE 73 70761 - 73289 2953 842 aa, chain - ## HITS:1 COG:SPy1805 KEGG:ns NR:ns ## COG: SPy1805 COG0653 # Protein_GI_number: 15675639 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Streptococcus pyogenes M1 GAS # 1 842 1 838 839 1407 86.0 0 MANILRTVIENDKGELRKLEKIAKKVESYADAMAALSDEDLQAKTPEFKQRYQNGETLDQ LLPEAFAVVREAAKRVLGLYPYRVQIMGGIVMHNGDVPEMRTGEGKTLTATMPVYLNALA GEGVHVITVNEYLATRDATEMGEVYSWLGLSVGINLAAKSPYEKREAYNCDVTYSTNSEV GFDYLRDNMVVRQEDMVQRPLNFALVDEVDSVLIDEARTPLIVSGQVSSETSQLYIRADR FVKTLTSVDYAIDVPTKTIGLTDYGIDKAEEYFHLENLYDLENVALTHYIDNALRANYIM LLDIDYVVSQMGEILIVDQFTGRTMEGRRFSDGLHQAIEAKEGVPIQEESKTSASITYQN MFRMYKKLAGMTGTAKTEEDEFREVYNMRVIPIPTNKPVARIDHSDLLYPTLDSKFRAVV ADVKARHEKGQPVLVGTVAVETSDLISKKLVEAGVPHEVLNAKNHFKEAQIIMNAGQRGA VTIATNMAGRGTDIKLGEGVRELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYL SLEDDLMRRFGSDRIKAFLDRMNLEEEEAVIKSKMLTRQVESAQKRVEGNNYDTRKQVLQ YDDVMREQREIIYEERRDVITADRDLAPEIKAMIKRTINRAVDAHSRADREEGIQAILNF AKANLVAEDSISLSDLEDLDFEAIKENLYERALKVYDAQIAKLQNQEAVIEFQKVLILMV VDNKWTDHIDALDQLRQSVGLRGYAQNNPVVEYQAEGFRMFQAMIGAIEFDVTRTMMKAQ IHQKEREHSSQRATTMAEKNIAAQTVRAQADSDIDFSKVKRNDLCPCGSGKKFKNCHGRK QF >gi|304425484|gb|AEEM01000019.1| GENE 74 73575 - 74456 1252 293 aa, chain - ## HITS:1 COG:SPy1811 KEGG:ns NR:ns ## COG: SPy1811 COG1940 # Protein_GI_number: 15675643 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Streptococcus pyogenes M1 GAS # 1 292 1 292 294 455 76.0 1e-128 MTKLYGSVEAGGTKFVCAVGDENFQVVEKVQFPTTTPYETIDKTVAFFKRFEADLAGIAI GSFGPIDIDENSETYGYITTTPKPHWANVDLVGLISKHFKVPIYFTTDVNSSAYGETIVR KGVKSLVYYTIGTGIGAGAIQNGEFIGGIGHTEAGHVYVAPHPQDVANNYTGFCPFHKGC LEGMAAGPSLEGRTGIRGELIELNSEVWDVQAYYIAQAAVQATLLYRPQVIVFGGGVMAQ EHMLKRVRDKFTALLNGYVPVPDVTEYIVTPGVAENGSATLGNFALAKKVSER >gi|304425484|gb|AEEM01000019.1| GENE 75 74610 - 76544 2328 644 aa, chain - ## HITS:1 COG:SA2167_2 KEGG:ns NR:ns ## COG: SA2167_2 COG1263 # Protein_GI_number: 15927957 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Staphylococcus aureus N315 # 97 461 1 379 385 314 48.0 4e-85 MDYGKVASDVVKAVGKDNLVAAAHCATRLRLVLKDDTKVDQKALDENPDVKGTFKIDGQY QVIIGAGDVNFVYDELIKETGLSEVSTDDLKQIASSGKKFNPIMALIKLLSDIFVPIIPA LVAGGLLMALRNFLTSAGLFGPKSIEEMYPAIKGISAMIQLMSAAPFMFLPILVGISAAK RFGANQFLGAAIGMIMTTPDLGGSTEYWNIFGYHVAQTNYAYQVIPVLAAVWLLSVLEKF FHKKLPSSVDFTFTPLLSVMITGFLTFTVIGPVMLLVSNGITDAIVWLYNTTGFIGMGIF GGTYSLIVMTGLHQSFPAIETQLLSAWTNGVGYGDFIFVVASMANVAQGAATFAIWFLTK NSKTKGLASSAGVSALLGITEPALFGVNLKYRFPFFCALIGSGVAAAVAGLLKVVAVSLG SAGFLGFLSINATSIPFYVLCELISFAIAFAITYFYGKTKAAGVFEAEAAAEQTAVETPA AKEAEVAEPAQTGVSAETIVSPLAGETVALTSVNDPVFSSEAMGKGIAVKPSGNTVYSPV DGTVQIAFETGHAYGLKSDNGAEVLIHIGIDTVSMNGEGFAQKVTANQKVKKGDVLGTFD TAAIAAAGLDDTTMVIVTNTADYSEVTPVAEGTVAEGADLLELK >gi|304425484|gb|AEEM01000019.1| GENE 76 76743 - 78182 1567 479 aa, chain + ## HITS:1 COG:SPy1816 KEGG:ns NR:ns ## COG: SPy1816 COG1621 # Protein_GI_number: 15675646 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Streptococcus pyogenes M1 GAS # 1 479 1 479 479 677 64.0 0 MNLPQEVRYRAYTDWSTDEIAKINDNVKQSPWHASYHIEPKTGLLNDPNGFSFFNGKYTL FYQNWPFGAAHGLKEWVHTESDDLVHFHETGAELRPDTKHDSHGAYSGSAYEIDGKLFLF YTGNVRDENWVRDPLQIGAWMDKDYNITKCEDVLIHQPSDVTEHFRDPQIFNYKGQFYAI VGAQSLDKSGFVKLYKAVDNNVENWEEVGNLDFGGTGSEYMIECPNLVFVDEKPVLLYCP QGLDKSELNYGNIYPNTYKVCQAFDTANAKLVGASEIQNLDYGFEAYATQGFNAPDGRTL IVSWIGLPDVDYPTDKYDYQGAMSLVKELSIKDGKLYQYPVEAITSLRAESENFAAKAET NNTYELELQFPANQKSEILLFADDKGNGLSLTVDTKDGKIILDRSKAGVQYATEFGTTRE CSIDPKETSANIFVDNSIIEIFINKGEKVFTSRVFPEDGQNGIQIKSGEPTGTYFELKY >gi|304425484|gb|AEEM01000019.1| GENE 77 78184 - 79146 772 320 aa, chain + ## HITS:1 COG:SPy1817 KEGG:ns NR:ns ## COG: SPy1817 COG1609 # Protein_GI_number: 15675647 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 320 1 321 321 488 78.0 1e-138 MVAKLTDVAELAGVSPTTVSRVINNKGYLSEKTKQKVQEAMKTLGYKPNNLARGLQGKSA QLIGLIFPNISNIFYSELIEYLEIELFKHGYKTIICNSQNDPAKEREYLEMLEANQVDGI ISSSHNLGIDDYERVGAPIIAFDRNLAPNVPIISSDNFEGGKLAARTLQKNGCENIIMIT GNDNTDSPTGLRALGFSFQIPDGKIFKVPNNLSTIRREMEIKSIIASNKPDGIFVSDDLT AILTMKIAHQLELNIPEDLKIIGYDGTSFIENFFPQLTTIRQPIDEIASLIVDVLLKKIK GEKTSKDYILPISLLPGGSI >gi|304425484|gb|AEEM01000019.1| GENE 78 79252 - 79680 580 142 aa, chain - ## HITS:1 COG:SPy1818 KEGG:ns NR:ns ## COG: SPy1818 COG0781 # Protein_GI_number: 15675648 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Streptococcus pyogenes M1 GAS # 1 140 1 141 150 195 70.0 2e-50 MTNNFTNSRRDLRERAFQALFSLEFGGEYLAAAQFAYTYDKTIEEDDTIDVPVFLLNLVK GVQDFQSEIDQQIETHLKSGWSLERLTLTDRTLLRLGLYEIKYFEETPGRVAVNEIIEIA KKYSDDTSAKFVNGLLSQFVVE >gi|304425484|gb|AEEM01000019.1| GENE 79 79673 - 80062 569 129 aa, chain - ## HITS:1 COG:SPy1820 KEGG:ns NR:ns ## COG: SPy1820 COG1302 # Protein_GI_number: 15675649 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 129 1 129 129 191 81.0 4e-49 MTTENIGDIVISPRVLEVITGIAATKVDGVHSLRNKAMTDSFSKTVLGKGVYLQTEEDGT VNADIYVYLQYGVNVPAVSIAIQQAVKAAVYDMAEVTISSVNIHVEGIVPEKTPKPDLKA LFDEDFLDD >gi|304425484|gb|AEEM01000019.1| GENE 80 80140 - 80700 894 186 aa, chain - ## HITS:1 COG:SP0435 KEGG:ns NR:ns ## COG: SP0435 COG0231 # Protein_GI_number: 15900353 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 186 186 307 90.0 7e-84 MIEASKLRAGMTFVTSDGKLIKVLEASHHKPGKGNTVMRMKLRDVRTGSTFDTTYRPEEK FEQAIIETRAAQYLYKMDDTAYFMDTESYEQYEIPVVNVEQELLYILENSEVKIQFYGTE VIGVTVPTTVELTVTDTQPSIKGATVTGSGKPATLETGLVVNVPDFIEIGQKLVINTQEG TYVSRA >gi|304425484|gb|AEEM01000019.1| GENE 81 80868 - 81182 387 104 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1898 NR:ns ## KEGG: GALLO_1898 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 104 1 104 104 180 98.0 1e-44 MTARLENTSGQIKEVKVGFSWTTLFFFFFVPLFRKDWKWLGIMIGSIIAGLMLTTILNID ANVSLGLNIAFAVSYNNCYINDLLAKGWMPASEVDEKILNDKLK >gi|304425484|gb|AEEM01000019.1| GENE 82 81233 - 82057 727 274 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1899 NR:ns ## KEGG: GALLO_1899 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 274 1 274 274 452 98.0 1e-126 MKNKGIILAILGILVLFFNLSQPVYAGVGNTESGGSVTTGGDGGSGSFDGSSGGFSSGFS SGSSSSSSTSTSSGDGDLFGAVFLLVMLYAFKKTGNDGKVEPENDEKAIEAIKLVHPDFD EYDFISYTKELYLELQNAWMDKDWERVRHLETESLFRQHNMQLQEYIDNHTTNHLDRVCV DRAIIKSFKMSDDHDVVKVILSSYMCDYIRNDDTGELIQGDPTEHLYTVYNMEFIYEEDD VSDSNPYQHWKLNTYEVVDEDEFYLKKTKFFSKG >gi|304425484|gb|AEEM01000019.1| GENE 83 82080 - 82544 617 154 aa, chain - ## HITS:1 COG:SPy1823 KEGG:ns NR:ns ## COG: SPy1823 COG2131 # Protein_GI_number: 15675651 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Streptococcus pyogenes M1 GAS # 1 153 1 153 153 282 88.0 2e-76 MTDRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSETDNCNEVGHK MEDGHCIRTVHAEMNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITYKTAY RMHPFAIELMEQKGVEYVQHDVPEVKLGMDESED >gi|304425484|gb|AEEM01000019.1| GENE 84 82566 - 83627 1168 353 aa, chain - ## HITS:1 COG:SPy1824 KEGG:ns NR:ns ## COG: SPy1824 COG0006 # Protein_GI_number: 15675652 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Streptococcus pyogenes M1 GAS # 11 353 15 357 357 462 65.0 1e-130 MLARVERFEAKLNQSEVDAFLVTGQNNIYYLTGFWGTSATVFISKSRRLFVTDARYTLIA KQSVQGFDIIESRDALQEIVKVIQADNLKKIGFDSQVSFAYYQTLQGVFAGYDLVAMTNF MEELRMIKDASEIATIRKACSISDRAFTDVLDFIKAGQTTELQVANFLDFRMREYGASGV SFETIAASGYRSAMPHGVASEKVIQSGETLTLDFGCYYDHYVSDMTRTIHIGETTDEERE IYDVVLRANQAVIDSVKAGMTRRDYDKLARDVIAKAGYAEQFTHGIGHGIGLDIHEIPFF GNSDELIEVGMTITDEPGIYLDNKYGVRIEDDLVVTENGCEVLTLAPKELIVL >gi|304425484|gb|AEEM01000019.1| GENE 85 83807 - 84151 321 114 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1902 NR:ns ## KEGG: GALLO_1902 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 114 1 114 114 197 100.0 1e-49 MLNVFMFLFMWLCEQGLIGLYFILGTGSLPTFGYIEPIYIVLYILATSAMTALYILPALI CKTSVKIIIFILCFFTSFTGLGWILLMVWAVSSNNSQRRREHEEELLDILRDRY >gi|304425484|gb|AEEM01000019.1| GENE 86 84294 - 85520 1070 408 aa, chain - ## HITS:1 COG:SPy1625_2 KEGG:ns NR:ns ## COG: SPy1625_2 COG2815 # Protein_GI_number: 15675501 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 243 403 82 246 287 123 43.0 7e-28 MNQEDYEKQQEMEKLLENDRNQRINQVEQLQNQNILEQERLNNEKLRYQEELLREQNTLQ FEKEMDDRIFQLRMTLAQTSDTLSRNALQALLNEEEAKRDRYYAEKEARRKAAELAEQEK VVKEQELAKKPDKGKGKKSNKKKKSSTNTLATIVLGILTLVAVIILVTVYKSYKQKYATE STSSTSTTIVHKGSVTSTTSDTKKQSNTRSKQASSSQKVSSKSSSKIKNSVSASSSKKVT SSSSIGSRASKDSSGFKIKDYTGQDYKIAVKDLVNNYSISESQIKIEEISTSDYKEGLII SQSPSQGETFKVGGDDKIVFKVAVESTVAMPNLTGYTYSEAIAALTALGVSSSHITVYQA DPNSSTGYVQVSSPSSTATVTAQTPYYGNTLSDNVVLYLAADEEQEEN >gi|304425484|gb|AEEM01000019.1| GENE 87 85781 - 88606 2940 941 aa, chain - ## HITS:1 COG:SPy1825 KEGG:ns NR:ns ## COG: SPy1825 COG0178 # Protein_GI_number: 15675653 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Streptococcus pyogenes M1 GAS # 1 941 1 941 942 1703 89.0 0 MQDKLIIRGARAHNLKNVNVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA YARMFLGNMEKPDVDSIEGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPY CINGHGAITASSVEQIVDQVLELPERTRMQILAPVVRRKKGQHKTIFDRIQKDGYVRVRV DGEIFDISEVPELSKSKMHNIEIVVDRLINKDGIRSRLFDSVEAALRLADGYVIIDTMDG NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGSKLEVDLDLVIPDRSKTL REGALAPWNPISSNYYPAMLEQAMTSFGIDMDTPFENLTEEEQNLVLYGSGEREFHFHYI NDFGGERNIDLPFEGVVNNIDRRYHETNSDFTRNVMRGYMNELLCATCHGYRLNNQALCV RVGGENGLNIGQVSDLSVADHLELLTHLELSENEKTIATPIVKEIKDRLTFLNNVGLNYL TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLISSLKKMRDLG NTLIVVEHDEDTMRQADWLIDVGPGAGDFGGQIVASGTPEDVAKNKKSITGQYLSGAKEI PVPLERRKGNGRVLRVKGASENNLQNIDVTFPLGKFIAVTGVSGSGKSTLVNSILKKAVA QKLNRNSAKPGKHKALEGIENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHY KDKNIAEILDMTVNDAVEFFAPIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLQRFVDDGNTVLVIEHNLDVIKTADH IIDLGPEGGVGGGQIVATGTPEEVAKVKESFTGQYLKDKLK >gi|304425484|gb|AEEM01000019.1| GENE 88 88926 - 89870 949 314 aa, chain + ## HITS:1 COG:SPy1827 KEGG:ns NR:ns ## COG: SPy1827 COG0598 # Protein_GI_number: 15675654 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Streptococcus pyogenes M1 GAS # 1 314 1 314 314 497 88.0 1e-140 MEQMFLSTALEFKEINTFEPGAWINLVNPSQEESVKLSEQFNIDITDLRAPLDLEETSRI AVEDDYTLIIVDVPTYEERNNKSYYVTIPLGIIVTDNAVITTCLQELTLFDNFFNRRVKN FYTFMKTRFVFQLLYRNAELFLTALRSIDRQSDRIEAELENATRNEQLIDMMELEKSIVY LKASLKFNERIVKKLSSSTSSLKKYIEDEDLLEDTLIETQQAIEMAGIYENVLNAMTETT ASIINNNQNTIMKTLALMTMALDIPTVIFSAYGMNFQNNWLPLNGLPHAFWYIVFIAAAM SAFVVIYFFRKKWF >gi|304425484|gb|AEEM01000019.1| GENE 89 90381 - 91037 797 218 aa, chain + ## HITS:1 COG:SPy1828 KEGG:ns NR:ns ## COG: SPy1828 COG4858 # Protein_GI_number: 15675655 # Func_class: S Function unknown # Function: Uncharacterized membrane-bound protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 216 1 215 218 289 68.0 3e-78 MDLTNLTKKNQEFIHIATNQLIQDGKSDDEIKEILEEVLPTIVENQKKGLTARALFGAPT VWAASFTEKASDKKAEQTAKNDNPWLMWLDTSLLFIGVVALLNAVIGFFNSTTTSSGLLS LLALGFGGGAAMYATYHFIYRHSGKPKSERPGWAKTILVLVLAMLGWVLLYTATAFLPAA INPQLPAIVMLIIGAAALLGRYFLQKKYNILNAMTPQQ >gi|304425484|gb|AEEM01000019.1| GENE 90 91083 - 91532 514 149 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1907 NR:ns ## KEGG: GALLO_1907 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 149 1 149 149 218 99.0 4e-56 MKKRKFLLGLSVLLLTILAGCGADSELTDVSQDIQTEINKDYSAELSEMNIMDIISVESD EEQQLSAQFSGTLYIMATKEDLQKLSSDVDFALNNVSFTAVKENSDDDFNLRYNNKTYFS VKKINVTDIDKVKITSDWSKKIIVALRNT >gi|304425484|gb|AEEM01000019.1| GENE 91 91534 - 91743 194 69 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 4 66 3 65 67 79 60 2e-13 MEEIQVHLDKMLKLRNITSKELAEKIGITEANLSILKTGKAKGVRFNTLMNICRELDCQP GDILKYRRD >gi|304425484|gb|AEEM01000019.1| GENE 92 91746 - 92270 487 174 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1909 NR:ns ## KEGG: GALLO_1909 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 174 1 174 174 272 100.0 3e-72 MKQIVFKVSREVVKIIRYLAIIGIIVMFLGILGVVLDGWNQNGMLTLDYGSQIAQVPIWF PMLILLLAAAIFYMVVMIMRALDKLLMNFQKDSYFNSENITYLSKILRCLLIATGIQLAV NLIFNFLNLEHVSDLFELSLKDYWFNIVLLVVNYIGILVIKHGIQLQKDYDEII >gi|304425484|gb|AEEM01000019.1| GENE 93 92405 - 92644 394 79 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15901383|ref|NP_345987.1| 30S ribosomal protein S18 [Streptococcus pneumoniae TIGR4] # 1 79 1 79 79 156 100 1e-36 MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKV TTAIKRARVMALMPFVNED >gi|304425484|gb|AEEM01000019.1| GENE 94 92705 - 93220 597 171 aa, chain - ## HITS:1 COG:SPy1830 KEGG:ns NR:ns ## COG: SPy1830 COG0629 # Protein_GI_number: 15675657 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 163 163 243 83.0 1e-64 MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINCVIWRQQAEN LSNWAKKGTLIGVTGRIQTRNYENQQGQRVYVTEIVADNFQILESRATREGQSGGSYNGG FNNNNSSFGGSSNDGGFSSQPSQSQTPNFGRDESPFGNSNPMDISDDDLPF >gi|304425484|gb|AEEM01000019.1| GENE 95 93232 - 93522 478 96 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161611280|ref|YP_140168.2| 30S ribosomal protein S6 [Streptococcus thermophilus LMG 18311] # 1 96 1 96 96 188 97 2e-46 MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWEKRRLAYEIQDFREGLY HVINVEAEDATALNEFDRLSKINGDILRHMIVKLDA >gi|304425484|gb|AEEM01000019.1| GENE 96 93747 - 93911 230 54 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1913 NR:ns ## KEGG: GALLO_1913 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 54 1 54 54 92 100.0 4e-18 MWVVRKMYWRSGQQYVQAQKMFETREEADNFRKGLEFATELYETNLPVSNKGEF >gi|304425484|gb|AEEM01000019.1| GENE 97 94137 - 94685 131 182 aa, chain - ## HITS:1 COG:CAC1360 KEGG:ns NR:ns ## COG: CAC1360 COG1268 # Protein_GI_number: 15894639 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 6 177 1 169 179 68 30.0 7e-12 MKTKKVVLMSIMLALLIISSKLIIPLPLLDFISIQIIIVYMLYPILGKYHSFLTLFIYLL LGIFGLPVFASGGGILYILRPSFGYLLAFLILPFIQDEVEKLLGKKVVTFTNMFIQNLIC LLFIYLFGLTYKTVILLVFYGKFEVFHDILFFSSLVDFLVDSGLTVIITLMMIKLRNYHL NN >gi|304425484|gb|AEEM01000019.1| GENE 98 94685 - 95353 290 222 aa, chain - ## HITS:1 COG:BH0783 KEGG:ns NR:ns ## COG: BH0783 COG0132 # Protein_GI_number: 15613346 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Bacillus halodurans # 5 220 7 230 242 114 33.0 2e-25 MDNQFIICGIDTDCGKSTASVLLHQYFKEKLNKNSIIIKPLQTGKTLDTDFYTSCGIPQE NIINFETYRSETSLHLAALLEQKNIQLEHIVQQIIKQVEFHSLSPVIIEMAGGIMSPINQ KQSMLDIVKAVNLPVILVVSSYLGSLNHTLLTLKVLQSEGIDIFGIIFNQVRTVEGIITD SNEYIKNLTELPILGYIPYLNDYKQRMKSENDKNRLIKNWRV >gi|304425484|gb|AEEM01000019.1| GENE 99 95346 - 96281 646 311 aa, chain - ## HITS:1 COG:SA2213 KEGG:ns NR:ns ## COG: SA2213 COG0502 # Protein_GI_number: 15928003 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Staphylococcus aureus N315 # 23 306 35 318 335 265 43.0 8e-71 MISKRDCLNILQSDGNWWEYYAQAILVKKNRSGNRIRLNTLLNAKSGLCAEDCGYCSQAK GSKSNIERYGLLPKNQIIRQAIIAKRNNSSVFCIALSGTRPTDKEISILCDVISEIKRIM TIEICLSIGLVRDDQLVKLKAAGVDRINHNLNTPRDNYPKITTTHTYQDRLDTLEVLRRN NINTCSGFICGMGETDEQLIELAFDLKSQEPYSVPVNFLLPIKGTKLEGRNELTPMRCLK ILVMLRLLFPDTELRISAGREYHLGEMQQLAILIVDSIFLGNYLTEKGAKISEDQKLIQG LGLTVEGECNG >gi|304425484|gb|AEEM01000019.1| GENE 100 96558 - 98096 408 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 208 507 1 303 306 161 33 2e-38 MALDAEIKTQLSQYLALIESDIVFQANLGTDENSKKVRDFIDEIVSMSDKIGFEEKKLSR TPAFRIAKKGQESGVEFAGLPLGHELTSLILALLQVSGRPPKVDEEVINRIKAIDTPLHF ETYVSLSCHNCPDVVQAFNIMAVINPNISHTMIEGGMFQDEVKAKGIMSVPTVFHNDEIL TSGRINIEQLLDLIAGPVSETTFADKGIFDVLVIGGGPAGNSAAIYAARKGIKTGLLAET FGGQVMETVGIENMIGTPYIEGPALMSQVEEHTKSYDVDIMKAQKAIAIHKKDVIEVTLA NGAILKSKTAILSLGAKWRNINVPGEVEFRNKGVTYCPHCDGPLFTDKKVAVIGGGNSGL EAAIDLAGLASHVYILEFLPELKADKVLQDRAEAHDNITILKNVATKEILGDEQVTGLIY TDRETDVDKTLDLEGVFVQIGLVPNTDWLKDSGIDLNNRGEIIVDNQGSTTVAGIFAAGD CTDQAYKQIIISMGSGATAALGAFDYLIRMND >gi|304425484|gb|AEEM01000019.1| GENE 101 98108 - 98668 823 186 aa, chain - ## HITS:1 COG:SPy2079 KEGG:ns NR:ns ## COG: SPy2079 COG0450 # Protein_GI_number: 15675837 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Streptococcus pyogenes M1 GAS # 1 186 1 186 186 333 83.0 9e-92 MSLIGKPIVEFSADAYHNGEFIKVSNDDLQGKWAIFCFYPADFSFVCPTELGDLQEQYAE LQKLGVEVYSVSTDTHFVHKAWHDDSDVVGTITYAMIGDPAHVLSEGFEVLGEDGLAQRG TFIVDPDGIVQAVEINADGIGRDASTLLDKVRAAQYIRKHPGEVCPAKWKEGEDTLKPSL DLVGKI >gi|304425484|gb|AEEM01000019.1| GENE 102 98882 - 99601 321 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 212 1 230 245 128 32 3e-28 MTDLITIDNVTKKYGDKTALANANLAIEKGDFVALVGMSGSGKTTLLRMVAGLEQPSQGT ISQNGVLIRSLNEKARVMFQDDRLLPWMTVRENLSFGNKSDKLTKEADELLKLVGLSDFA DYYPAHLSGGQKQRVALARALMYHPELLLLDEPLGALDALTRRKMQDLILDICQSRDFTT MLVTHDIDEAARMANKIVVVKHSTIVDIVDNPYRKDDSYEGKAKRAEIVDNILATIYAE >gi|304425484|gb|AEEM01000019.1| GENE 103 99611 - 100384 830 257 aa, chain - ## HITS:1 COG:PA3443 KEGG:ns NR:ns ## COG: PA3443 COG0600 # Protein_GI_number: 15598639 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Pseudomonas aeruginosa # 15 255 11 251 262 256 52.0 3e-68 MKRLTVKKSDVVLNILPWLIPALLIIFWQIGVMAGWITSSFIPSPWSVLKQGVSLFKKGT LQENISISLYRASVGFVIGGGIGFLLGVINGVSRVARMTFDSTIQMLRNIPHLALIPVVI LVLGIGETAKISLVAIGCLFPMYINTYHGITSVDSHLVEMGKSYGLSRLQMFRKIIFPGA MPTILMGVRYALGVMWTTLIVAETVSADSGIGYMSTNAQQFMNMKTIFLCILIYALLGKL SDFIAKNLEDILLDWRN >gi|304425484|gb|AEEM01000019.1| GENE 104 100404 - 101384 1394 326 aa, chain - ## HITS:1 COG:PA3445 KEGG:ns NR:ns ## COG: PA3445 COG0715 # Protein_GI_number: 15598641 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 31 319 23 309 323 152 32.0 6e-37 MKNKKIARKSFIFALLVCWIGVAFYGWKQTQADDSSNLQTIVIGYQAGDEFDISQARGEL VEKMEAQGYKVVFKEFQNGSAEMQALASGSIDYARIGDTPGVSALAAGTDLTYVAVGGKK DQGSGILVHNDSGIDSAEDLAGKTIAYTQGTSSQYLVMKALAAAGLTTDDVNLVSLDQSA ASVAYADGTVDAWANWDPATSQAEVTDNSKLVVSGSDIGDNNRSYIVAASDFAEENEEAT ALLIEYTNEDMEWANENTDELVDLLTDSLGVDQAVVEKMVSRRTYSMTAMTSESVSELQD IADLFYTEGLIENKVTVSDHVQYAED >gi|304425484|gb|AEEM01000019.1| GENE 105 101386 - 102897 961 503 aa, chain - ## HITS:1 COG:mll6983 KEGG:ns NR:ns ## COG: mll6983 COG0318 # Protein_GI_number: 13475813 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mesorhizobium loti # 141 489 149 499 508 224 37.0 4e-58 MTELTKTLTEKLSENAQKPIIKDIQLDTWFTGQDILDDIKQLQDFFQRQGMGYQDTLFLA FGNSALYVPLNQALWQLGMIAHPVSETTPAKELQKYYEAADYPAIIVESDKIEAFEKYAE LTAHYLPLKTCPNLIILTKSGHLAPSKLPTETSLALILNTSGTTGKPKQVGLTHQQLIIG AKNSIASHPLTENDRVLVVMPMFHINAQNIIVNATLLSSGQLIIAPKFSASRFWTWIQDY RITWTSVVPTIVTILLKNETSRNTFKPVSHLRFVRCGSAILTKSKEIAFQETFGVPILEG MGMTEASGQITLNPPTAIKQGSVGKPFKIDLAIVKDNQLTKQAMQTGEVALRGPQVITDY LQPSPSAFKDGWLLTGDIGHLDEDGYLYLEGRKKDFINRGGEKISPVIVEDVLAQLDFIK DVAVIPVADEVYGEVVAAAIILQNAVKPSAALEADIMAFAAEHLAKYCQPTQLYFMADFP RNPTGKLLRRQLIEEVLSLEKGK >gi|304425484|gb|AEEM01000019.1| GENE 106 102894 - 104417 1413 507 aa, chain - ## HITS:1 COG:SPCC1827.03c KEGG:ns NR:ns ## COG: SPCC1827.03c COG0318 # Protein_GI_number: 19076049 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Schizosaccharomyces pombe # 151 505 158 511 512 216 36.0 7e-56 MTQLVDDLKARLLENAEREFLKDISLNRWFTGQDVEDDIAIFQEAFRRNGLGKDDVVFMA LENSAVYIPMNQAMWRYGITAHPVASTTPIAELVADYDENQYSAMIFNQEKAAAFKENAE LRYEVLHLKTFPDLVLLSRKDNDNTHKEMAPTEDTLGWILNTSGTTGKPKQVGLSHRFMR LAGEDDLVSHRMTKDDTVLIVMPMFHINAQELIVVSTLLSNGRIVIAPKFSASHFWQWIN AHHCTWSSVVPTIVTILLKNQQSLDNFDPNHQLRFIRCASAMLPINRNREFSETFGVPIL EGYGMTESCSQCTLNPIDAIKVGSVGKPYGSEVKIVDGDDLTMKAGIEGEIAIRGPHVIT DYLSPSPKSFRDGWLLTGDLGYYDEDGYLWLNGRSKNVINRGGEKINPTVIENVIGNLDF VRGIAAVPLPDDIYGEIVAAAIILQPDVVASAELKEEVREYCAKHLVKHECPTEIYFVEA FPLNPTNKIMRPQLSQMLAKQRKAETV >gi|304425484|gb|AEEM01000019.1| GENE 107 104425 - 105630 865 401 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1924 NR:ns ## KEGG: GALLO_1924 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 16 401 1 386 386 690 98.0 0 MDNGCQVNLTEGAAILPTEAKKKKRYLYEVDLMRCIFIFGVLINHVSSLFTNAVSKSSGA YEFFTATHLMPHFTRMGFMFVTGLVLFLGNYKKDHLDIVPFWIKRFKGSGIPYVFWNGFY ILITLLVMGSFTFPEWLGEWGDALLHGNRFYLYYILVTMQLYLIFPIMLWLYKRFVNRHN LIISISALIQLLFLFYIKYIFPHQDHTNWPYLFRSYGMFVLTYQFYFMAGAYVSIHYDKV TTLLMTYQKRIYAITACLSLGTIGLYYYNTKILGLSRHYAHLVHQPYMMIYAIFMIATIF ALSLHYAKNREKPSLQWLRRSVDLSSKLSFGIYLTQTASLAIFGLVIDWINPYLSDVALA LLFPLGYLLVLGGAWLISYFCYKVSPFGILIGRPNHIKKGN >gi|304425484|gb|AEEM01000019.1| GENE 108 106767 - 107921 559 384 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 18 357 9 324 378 219 36 7e-56 MINFTDYGIEMWDDEKIASFRRTLLAWYDNEKRDLPWRRTKNPYHIWVSEIMLQQTQVVT VIPYYERFLAWFPTVDDLAKAPEEKLLKAWEGLGYYSRVRNMQKAAQEIMDDFKGEFPST YDDILSLKGIGPYTAGAIASIAFDLPDPAVDGNVMRVMARLFEVNYDIGDPKNRKIFQAI MEVLIDPERPGDFNQALMDLGTDIESAKNPRPDESPIRFFSAAYLHGTYDKYPIKLPKKK PKPLQIQAFVIRNSKGDFLLEKNTDGRLLSGFWSFPIMKTDFIGQQLDLFETDNAKNTLK TTSQKTLFKEDYQLTPTWTNQTFNHVKHTFSHQKWTIELIEGSVNSNEFTKDRELRWVAQ DQLSTYPMATPQKKMLKEYLRKEK >gi|304425484|gb|AEEM01000019.1| GENE 109 108150 - 108392 79 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293365100|ref|ZP_06611817.1| ## NR: gi|293365100|ref|ZP_06611817.1| ADP-ribosylglycohydrolase [Streptococcus oralis ATCC 35037] # 9 79 11 81 84 84 50.0 3e-15 MVNVEDFQILSGADELVTYESSKGKYRYYCKNCHSQIYHIKDDMPDKVTLKLGTIDRCEQ DLTLLERKHIHNSQKFPWLE >gi|304425484|gb|AEEM01000019.1| GENE 110 109047 - 110252 1262 401 aa, chain - ## HITS:1 COG:lin2274 KEGG:ns NR:ns ## COG: lin2274 COG0477 # Protein_GI_number: 16801338 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 1 394 1 394 407 431 62.0 1e-120 MDKKINRWLVMAASTAILLCTGAVYAFSTFAQPLSEQTGWTMPQIMLAFSINSAIGPIPM ILGGYFADKGWVKWSIAIGAILFASGFYLTGTATSLAQLYIYYGLIAGLGQGFAYSGCLS NTLRLFPDKRGLASGIITGGMGLAAVFASPIANSLILSHDAQYAFRTIGLAYIVIVLVAS VFVQKAPAGYKPDGWNPPTSSAQNVVNKTWIDMLKTPVFYVVIAMFFVGAFSGLMIASNA RTIGTSMFGLSATVAALYVSLYSIANSSGRFIWGTVSDRIGRSNTLYIIFTVIALALAVL AFVPGQAGFAVGIIGLGICFGGVMGVFPSIVMENYGPANQGVNYGIVFTGYSVAAYFAPS IASNIAVANNGSFSIAFYIAIILALAGLLLNFLYGKISQKA >gi|304425484|gb|AEEM01000019.1| GENE 111 110488 - 111087 879 199 aa, chain + ## HITS:1 COG:SP1471 KEGG:ns NR:ns ## COG: SP1471 COG0431 # Protein_GI_number: 15901321 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 197 2 199 201 198 52.0 5e-51 MKLVAIVGTNSDRSTNRKLLKFMAKHFSDSADIEILEIKDLPAFNEPEDKLAPAPVADFS QKIASADGVIIATPEYDHTIPAALASALEWIAYTSRVLINKPTMIVGASLGALGTSRAQA HLRQILDAPELKARIMPGTEFFLGHSEQVLDDDFNLNNPEKVAELEDNFKEFQSFVEISN QIVSQADTDRKRAFAWEAK >gi|304425484|gb|AEEM01000019.1| GENE 112 111101 - 113515 2979 804 aa, chain + ## HITS:1 COG:SP1472_1 KEGG:ns NR:ns ## COG: SP1472_1 COG0431 # Protein_GI_number: 15901322 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 186 187 232 55.0 2e-60 MKLVAIVGTNAKKSYNRLLLQYMARHFAKKADIEILEITDVPMFNETDDQTESAIIQEFN SKITKADGVIIATPEHNHTIPSSLNSLLEWLSFNIHPLAGKPTMIVGASYDIQGSSRAQL HLRQILDAPGVNATVMPGSEFLLGRVQTAFDENGNLKDQGTIDFLESCFFRFLRFATIAN QLNEPEEVRFEPGTYQVTTVGHNGDLPMSVTLSEERIEAIDIDSSGETGGIADVVFTRIP SEIIEGQTLNVDAVSGASVTSNGVLDGVARAVRQAGANPDALRSRPKAPSALDKEDRTYD TELVVVGGGGAGLAAAARALQAGKKVVVVEKFPSVGGNTVRAGGPMNAPDPAWQNTFAAN PGEANTLQELHDIDEATIDPEFIDDFRALKVEIEEYLKDPTYLFDSKLLYRIQTYLGGKR KDLKGNEIHGNYQLISVLTERALESVRWLENIGVEFVRDEVTMPVGALWRRGHKPKVPMG VAFISVLKDFVLKNGGIILTDTQVKELLITDGIVTGVKGTGRNGQTITVNGKAVILTTGG FGANTKMLQQYNTYWSEIDDDIATSNTPAATGDGILLGQSVGADLVGMGFSQMMPVSDPV TGALFSGLQVPPANFIMVNTKGKRFVDEYGSRDQLSQAAIDNGGLFYLIADENIKETAYN TSQEKIDAQVEAGTLFRADTLEELAEQINIDPAVLVETITNYNSYVDAGHDPEFDKGAFD LKVEKAPFYATPRKPAVHHTMGGLKIDTKAHVINENGQTIKGLFAAGEVAGGLHAGNRLG GNSLTDIFTFGRIATDTAIAEYLG >gi|304425484|gb|AEEM01000019.1| GENE 113 113784 - 114212 188 142 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1930 NR:ns ## KEGG: GALLO_1930 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 142 1 142 142 204 100.0 1e-51 MKMTVYFDGAFWSALIEFTDSKKRYKAFRYVFGKEPKDDDILNFIDVSLGKWLRRYDKVK VSSEFSAPAISQKKRNPKRVQRDINKAKCKPVVSTKAQLAMQEMREEVKKAQKSKQKVKR ELEKERKYLLRQEKRHQKKRGH >gi|304425484|gb|AEEM01000019.1| GENE 114 114320 - 114739 457 139 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1931 NR:ns ## KEGG: GALLO_1931 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 17 133 17 133 133 221 99.0 6e-57 MRVVSVLGLLLLSFLFYCGDVKAETADNICFVTLDAVKEKMAAKEEFFLFVGRLDNVDTQ RGLKRLEAVEQTIYFLDTKEIDYVAYKKFAKKYNIRTMTHLGHFKGKYQFAVANVFTVDL PSFLGYQGILFQNQQNLLY >gi|304425484|gb|AEEM01000019.1| GENE 115 114822 - 115229 511 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIRERIKSSKGYQVLIAMLDSYFGQDYIIRKITYDDLDPTSLDFQLSVDFPKLKGVDVG VAHSGPRQMFRMGGTGVIGIAVPKDGGDAKLTSGERGDGLFWILGDKKLEWGSRVDNLEE VRYYFDAFKKYYDNL >gi|304425484|gb|AEEM01000019.1| GENE 116 115242 - 115649 392 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIREEIRTSKGYQVLITMLDSYFGQDYIIRKITYDDLDPTSLDFQLSVDFPKLKGVDVG VANSGPSQMFRIGGDGFIGIAVPKEGCLGILTSGEKGEGLDKILGDSALRWGAGLDNIES VDKYFDAFKKYYDNL >gi|304425484|gb|AEEM01000019.1| GENE 117 115662 - 116069 379 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIREEIRASKGYQVLIEMLDSYFGQDYIIRKITYDDLDPTSFDFRLSVDFPKLKGVDIG IANSGPRQMFRMGGDGDISIGIPKIDGLGMLTSGERGDGLFWILGDKKLEWGSRVDNLEE VKYYFDAFKKYYDNL >gi|304425484|gb|AEEM01000019.1| GENE 118 116082 - 116492 277 136 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLEIREEIRTSKGYQVLIAMLDSYFGQDYIIRKITYDDLDPTSFDFQLSVDFPKLKGVDI GVGNSGPRQMFRMGGNGSINITIPKKDGISILTSGEKGDGLIRATNSECLRWRNRIDNLE EVKYYFDVFKKYYDNL >gi|304425484|gb|AEEM01000019.1| GENE 119 116494 - 120465 2482 1323 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKRIQQIQVLIVTLLLLTSIFVDCGVKPVTVYGAQTGATSEVTITNKQLDSKLSKTQQW VNSVSDNVEKSGLVFLDAEQTSKGELKLTTLKKLNDNFSSVTTVTFASNNKNAEFQVVIL KDSKELAVQKMSGQIEKNSSGVFFKYTDSKTKKENTVNLTSGHSSAVAAIPLAFEMVGGA SELVGMTAAMTAALPAIAIVGGAAVVVGGGYYLYTKSTVAKTYPNASVSRANVAQKELAS LTASYKANTQANNSAQAAKNLSSIKGYSKALNTNIKSINVNVNSINTNVPSTTRAGNIDL TDFYKTMSDFNQTMTSFNQSMKETTKYLENMNVEISKNMAELSKGMAGFFENMEKLEDYF RFSATPSFSSVTYDKNTKCLNLVGSMPSESTVYIYVDAKLVQVSETDKKGNFNFKVNVKQ GEVAVDTIQKPINGKKYMSCSMIGLLGFPTFKIHEDGDLTTSERTNKYLKNPLLVRQTTA SPTFDKVTYDSKTKTLNLVGSMPSASTLDIYIGDKKIRTEQTAANGSFNIKVNVENNSVA IRAIQNPTSKIKYVEPFFSNVLSYPKFTVQADGTIFVNSQANKLLKQTLQEGRYTASPTF DKVTYDSKTKTLNLVGSMPSASTLDIYIGDKKIRTEQTMANGSFNIKVNVENNSVAIRAI QNPTSKIKYVEPFCSNVWSYPRFTVQADGTIFVNSQANKLLKQTLQEQRHTASPTFDKVT YDSKTKTLNLVGSMPSASTLDIYIGFQKIRTEETDNNGHFDIKVKVENDNVAIDAVQKST NKFKYTSLLGFWGAPKFYIQKSGEITCDEGVKLANGVSIKIKKFTPIPMVDEVVYNEKND SLTVPITMSIASQFTVYRNNTKIQTGNCEANKSSLVTIPLERGYNEIKIDIIGKNTSTTI YSNSTKLEFSIGNSRNIKATSSTNVSLKKKLPETSTTRSTIPKFSDISFDTETNSFNISG KMLWKGTITPYLNGEKLQSISTDEIGRFKLSIPVKRDANGVANIAIDGVNDETKLFKYSS YMDEIDFSTFMIDASGNISVSDFIKNSITPKQVVTPLPNVAPIPVGKGVTVQGKALPNSD VTVKNRGIEYGGKADDKGIFSIPVPEILVNDVVEIFVKAPSTAVISYTTSEAVSVQAQSS SSEATVNKDTPKTNESETTSDINDTIYTPEQMGVRTAQEFAAAVVVENGMLTEESIEQLA RLAEINAAANVVTLGSYVANSTSSYDQTAYRAGNTFYTMGSAGWDAIMDKLQELGVDSSE QFNEMWKINQKFLDNQIVKEKTFEFTVNPTTLREDKFGYLEYTYLFNHGYHLVELNERFK MVK >gi|304425484|gb|AEEM01000019.1| GENE 120 120474 - 121181 637 235 aa, chain - ## HITS:1 COG:BH0684 KEGG:ns NR:ns ## COG: BH0684 COG1404 # Protein_GI_number: 15613247 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 27 210 120 325 372 60 26.0 3e-09 MFQRNRTLLCVCTFLLIAGLFLFAIFERESKLRVAVIDGASSSHFSFYVKKINYEKGDNE TVIHSNIVWGLLSKDLDVSKIDFFEYSVMGKNGQINTATLTKALKQAQKDNIDVINFSGG FYLEDEEIKEQVQSLLKKGVVIVAAGGNNYQGIADFPARMSGVISVGSKKGENISPFSAI DKIDIYENGEEILYDGKTYSGTSFATPKVTNKILKEYFRTKNLGKIKDNILKKEN >gi|304425484|gb|AEEM01000019.1| GENE 121 121339 - 122382 1254 347 aa, chain - ## HITS:1 COG:SP1855 KEGG:ns NR:ns ## COG: SP1855 COG1063 # Protein_GI_number: 15901683 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 347 1 345 345 553 78.0 1e-157 MKSAIFEKAGLMTVEEVAKPTLQADDDVIIKVVRACVCGSDLWSYANGDEKAAHSENSGH EALGIVEEVGSAITTVQPGDFVIVPFTHGCGECDACRAGFDGTCDNHPGYTNWSSGFQSE YVRFHYANWALIKIPGQPSDYSEGMMKSLLTLADVMPTGYHAARVADVKRGDKVVVIGDG AVGQCAVIAAKMRGASQIVLMSRHEDRQQMALASGATAVVAERGEEGIAKVRQILGGGAD AALECVGTEAAIEQALGVIHNGGHVGFVGVPHYNNRPLGSTFAQNITVGGGSASVTTYDK QLLLKAVLDGDINPGRVFTNTYRLDDINQAYKDMQDRKAIKSMIVMD >gi|304425484|gb|AEEM01000019.1| GENE 122 122789 - 123103 479 104 aa, chain - ## HITS:1 COG:SP1776 KEGG:ns NR:ns ## COG: SP1776 COG0526 # Protein_GI_number: 15901605 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 104 104 164 80.0 5e-41 MAHNITDATFEAETSEGLVLVDFWATWCGPCLMQAPILEQLSEEIDEDELKIVKIDVDEN PDTAQKFGIMSIPTLLFKKDGEVVKQVAGVHTKEQIKEIVAELS >gi|304425484|gb|AEEM01000019.1| GENE 123 123660 - 123860 230 66 aa, chain + ## HITS:1 COG:SP1916 KEGG:ns NR:ns ## COG: SP1916 COG0671 # Protein_GI_number: 15901740 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 66 102 167 167 71 62.0 3e-13 MPSRHVFSATIISMAILRLNLILGIFFLILSLVIALCRVLGGVHYPRDVVAGFLVGIVCG LLLFLF >gi|304425484|gb|AEEM01000019.1| GENE 124 123940 - 124800 479 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 1 279 1 283 286 189 36 1e-46 MLDPITLKLNVDPLILSALSEDINNEDVSTNSVMPENVAGQVDLICKEDGIICGLPVFER VFYLLDPTTTFDVWVKDGEAVKAGQHLGTVRGDIRVLLSGERTALNYLQRMSGIATYTHE MVELLKDSPITLLDSRKTTPNNRIFEKYAVKVGGGKNHRYNLSDGVLLKDNHIGAAGGVK EAVLAAKNYAPSVRKIEIEVETLEMVKEAVEAGADIIMLDNMDHDTMKEAVTVVNGKAEI EISGNVTKENLASYVDLNVQYVSSGAITHSAKILDLSLKNLHPVDN >gi|304425484|gb|AEEM01000019.1| GENE 125 124828 - 126132 1378 434 aa, chain - ## HITS:1 COG:FN0009 KEGG:ns NR:ns ## COG: FN0009 COG0029 # Protein_GI_number: 19703361 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Fusobacterium nucleatum # 4 384 7 382 435 387 51.0 1e-107 MKTNVLIVGSGCSGLYTALNLPQELQITIITKDTLENSDSFLAQGGICMLKDDSDYESFF EDTLRAGHYKNDKVSVDLMIKSSPDVIKDLLDFGVDFQRDENGNLAFTREGAHSDKRILF YQDTTGKEITSRLLAAVKKRPNITLMEHICLLDILEEDNRCYGGVVRLENGDLEKITADV TVLASGGVGGLYKNSTNFKHLTGDALAISLKHDIELKDMSYVQIHPTTLYQENPKERSFL ISESVRGEGALLYDKNMNRFVDELQPRDVVAQAILKQMEKDGTDHVWEDLRTIPKKELEE HFPNILAHCREAGYDPFTECIPVVPAQHYFMGGIKVNHHSKTTMDALYAVGETACNGVHG QNRLASNSLLESLVFAKRAAKDLVAHYETVAKLPESLSELDLEDYQDQESLEEDYKKMVL EKLTEQNQLTSYIV >gi|304425484|gb|AEEM01000019.1| GENE 126 126368 - 127288 896 306 aa, chain + ## HITS:1 COG:aq_1889 KEGG:ns NR:ns ## COG: aq_1889 COG0379 # Protein_GI_number: 15606917 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Aquifex aeolicus # 6 303 20 321 322 258 44.0 9e-69 MNTREMQDEILRLKKEKGVCILAHAYQSQDIWEVADFVGDSFALSKYAAKAPQDTIIMCG VRFMAETVKVLSPEKTSILANPMAGCPMAAQIDKKLVSWLKEAHPDYTVVAYINTTSEVK TLVDVCVTSSSAVKIISNIDNDKILFVPDRNLGQWVAEQCPDKQFEFFKGGCPTHMRMRK RDVIRAREEHPNAKVLVHPECLAEVTELADFAGSTTEIMAYAKNSSEKEFIIGTESSIVQ HLQFECPDKRFYLLSTECVCHNMKMTTLADIYNCLLGQAGEEITLDEETINGARRSIDQM ILLGQK >gi|304425484|gb|AEEM01000019.1| GENE 127 127707 - 127994 245 95 aa, chain + ## HITS:1 COG:SP1115 KEGG:ns NR:ns ## COG: SP1115 COG1396 # Protein_GI_number: 15900982 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 80 1 80 287 66 45.0 2e-11 MAYLGKIFKTFRESRGMKLTEVAKTGLSKSQLSRFEHGETDLTITKFMIALDEINVPIEE FMYAAHDFQQNEFNTLLEKIFKYQKSRNSYQWYNS >gi|304425484|gb|AEEM01000019.1| GENE 128 128011 - 128700 217 229 aa, chain + ## HITS:1 COG:no KEGG:str1951 NR:ns ## KEGG: str1951 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 229 168 424 424 304 58.0 2e-81 MIEKYQPFLTVSLDGPQLIHDKLRGKGKHQKNNIAKSDIFNYLVEMKVKFNINNVFSKNK VLTVKEAEMPMKKRKSFIDQSINDIINDNVNSFISPILYDVLISMIYKSKSLSFCDDINT MNTRTYDVDGSKKACFRFWGKHHSKRVEKFNNKDNFSRCKNCWCKNMCMECVANMIDSYS SIISETGVFLDCPKQELMEYCIYKIIAISKDKNKLVKLVNNFERFIRYA >gi|304425484|gb|AEEM01000019.1| GENE 129 128693 - 130243 207 516 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 317 496 5 200 223 84 28 5e-15 MLKEFISKKILLIYLVCISITWLEAIINPSIVSMVIRSFEHQKLETLWYALALGIIGNII LLIGLSGKRYFYAKLIAFFNFKLKKKIFYQFLYSDSIATNDILSDLENDIKQLEDNCIEP SVIILSSLGFTIVSAIYALCTNFLLGLIFILFYSIPALCSGIGSTKLDLISMQKSKINQS YLSKLTNIIGGARVIKNYHGEEFFYEKYSQELHNNIKQNINYEKQRTINISIVNGIDAFC SVFPIIIGGFMTFYGKLSGANFVAIYLVSYNISYQFQDLSYYINTFKSSKNLRQKYQQIF DIPTIDIMRSHNDLFPIQLKNINLTFDNKVIFSNFSYQITSGQKIAVIGPSGCGKSSLLN IIYGEMLPDSGQVLFNGKSLQKQQIMQSTAYILQDSYCFDELTLEENIALSKTFDVDKMD KILNLVNIAYLKGKSINPNKISGGEKQRIEIARSLYHDSNLILADEVKSNLDKANAKQIE EILLALPQTVIEVIHHYTDETLNHYDQVIDLSRKNS >gi|304425484|gb|AEEM01000019.1| GENE 130 130291 - 132627 2372 778 aa, chain - ## HITS:1 COG:SPy1837 KEGG:ns NR:ns ## COG: SPy1837 COG1193 # Protein_GI_number: 15675664 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Streptococcus pyogenes M1 GAS # 1 778 1 779 779 1112 75.0 0 MNNRILEQLEFDKVKQLFAGYLQTEQGQDELRKLEPMTEPDRISRSFDEMSDMEQIFIEH HSFGMGSLRDISESMRRLELDADVNISEIIDIKKVLQVSAEIKHFYNDLENVELSALNTL FEKIELLPSLQGSLQAINDGGFIENFASSELDRIRRQINHDEGRVRQILQDILKKQADHL TETLIASRNGRAVLPVKNSYRNRISGVVHDISASGSTVYIEPRAVVQLNEEITQLRADER HEMARILRELSNMLRPHTNIIRNNAWVLGHLDFVRAKFLFMQENNAIVPQLSADKTVQLL QARHPLLTNPVANDLHFLNELTVIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGS KVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAADKDSLVLVDELGAGTDPQEGA SLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENASMEFDTETLSPTYHFMQGVPG RSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEEQTHESRKRLDHIKEVEQDNL KFNRAVKKLYNEFSHAKDKELEKASAKAQEIVDKAMAESEEILKNLHDRASLKPHEVIEA KSQLKKLAPEVDLSKNKVLKKAKKLRAPRVGDDIVVTAYGQRGTLVNQGKNGKWEVQVGL IKMTLKEDEFTLVKVQEEAQKPKKKQVNVVKKSKKSAGPRARLDLRGKRYEEAMQELDEF IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGRGCTIANLG >gi|304425484|gb|AEEM01000019.1| GENE 131 132733 - 133281 411 182 aa, chain - ## HITS:1 COG:SPy1839 KEGG:ns NR:ns ## COG: SPy1839 COG1286 # Protein_GI_number: 15675665 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Streptococcus pyogenes M1 GAS # 1 181 1 181 181 162 54.0 3e-40 MLSILLVLILIWHFYIGYSRGIILQTYYFIASIVSLVIASQFYQTLAEKITLWIPYSNAS QGATVNFFTDVNIFDLDQVYYAGVAFTAIYVVVYLLFRFIGILVHLAPINHFDNVKMNCV SGVLAILVTLIFFNLVFTILATVPMTTVQNILSGSFLVRVIVNDLPPLSNIIKALWVTAI LG >gi|304425484|gb|AEEM01000019.1| GENE 132 133284 - 133592 423 102 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1943 NR:ns ## KEGG: GALLO_1943 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 102 1 102 102 137 100.0 1e-31 MKSKNRYKFVFGDKPLTLTTDKDNLFMEEVERVAKEKYNTIKEKLPQADNETIAILMAIN SLSTQLSREIEVEKMEKELTALRSEAIVDIKEKASKSDSDED >gi|304425484|gb|AEEM01000019.1| GENE 133 133714 - 134616 874 300 aa, chain + ## HITS:1 COG:SP0403 KEGG:ns NR:ns ## COG: SP0403 COG1039 # Protein_GI_number: 15900322 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HIII # Organism: Streptococcus pneumoniae TIGR4 # 1 300 1 293 293 350 62.0 2e-96 MNTIVMKMGKDDLQNLIKALTSQQVNNNNPYVTFAAKVKGVTVLVYTSGKVVFQGANAET IAEQFGYQSASKSTSDTVSGQNMPLIGSDEVGNGSYFGGLAVVASFVTPDDHALLKKLGV DDSKNLTDSKIRQIAPVLENNIKHKALLLSPQKYNQVVGKGKMHNAVSVKVALHNQAIYL LLQDGVKPEKIVIDAFTSRQNYQKYLKNEANQFANPLTLEEKAEGKYLAVAVSSIIARNL FLENLDKLSQEVQYKLPSGAGSQSDKVASQILAAYGMSGLEHTAKLHFANTQKAQALLKK >gi|304425484|gb|AEEM01000019.1| GENE 134 134633 - 135226 771 197 aa, chain + ## HITS:1 COG:SPy1842 KEGG:ns NR:ns ## COG: SPy1842 COG0681 # Protein_GI_number: 15675668 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Streptococcus pyogenes M1 GAS # 1 197 1 197 197 281 68.0 6e-76 MKHFIKEWGPLILFFLILILSRAFIWQPVKVDGHSMDPTLADGERLIVLSTTSIDRFDIV VAKETEDGKTKEIVKRVIGMPGDTITYKNDVLYVNGKKVDEDYLDEYKKAFENDQLQDTY SYNTLFQELAESSDAFTTDSDGNTEFTVKVPKGQYYLLGDDRIVSKDSREVGTFSKSDIV GEVKFRFWPLSKIGFIN >gi|304425484|gb|AEEM01000019.1| GENE 135 135344 - 137824 2990 826 aa, chain + ## HITS:1 COG:SPy1844 KEGG:ns NR:ns ## COG: SPy1844 COG0507 # Protein_GI_number: 15675669 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Streptococcus pyogenes M1 GAS # 1 826 1 815 817 1065 67.0 0 MEYFFSGTIDRIIFENASNFFKILLLEIEDTDSDFDDFEIIVTGTIADIIEGENYTFWGE LTQHPKYGEQLRVTRYERSKPTSSGLIKYFSSDHFKGIGKKTAEKIVQLYGDNTIDKILE DPSKLDSISGLSKENKDNFLTKLKLNYGTELILSKLAEYGLTNRVAFEIFNQYKEDSLDI IQENPYQLVEDIQGIGFKIADQLAEQLGIEADAPQRFRAALVHSLFETSIERGDTYVEAR DLLENAITTLEEARQIELDPAAVAKELSTLIAEDKVQNVGTKIFDNTLFYAESGIKKHLT RILDTPLDQNFSDGDLQEEIADVEEAFGISYDDVQKNAIKEALKSKVFILTGGPGTGKTT VINGLIAAYADLHHIDLEKKDIPIILAAPTGRAARRMNELTGLPSATIHRHLGLNGDNDY QAIDDYLDCDLIIIDEFSMVDTWLANQLFSSISSNTQVIIVGDSDQLPSVGPGQVLADLL KIEALPQLALTKIFRQSEDSTIVTLANQMRLGKLPADFTQKKADRSYFEASAQYIPEMIP KIVSAAVKSGIDPQEIQILAPMYRGAAGINRLNTIIQDLLNPLKDQLSFAFGEMNFRKGD KVLHLINDAELNIFNGDIGYITDLIPAKYTESKQDELYMSFDGTEVIYPRNEWHKITLAY AMSIHKSQGSEFQVVILPITRQSHRLLQRNLIYTAITRSKSKLVMLGEIAAFDYAIKNEG AKRNTYLVQRFTSSAQEEESIDLQTEISQQTSPKTDNEAEKITSPTSPQTNISKEENIQL TLDIAENEQTQTEQEPKIYRLTEENLAFINPMIGITQADIEQFFKK >gi|304425484|gb|AEEM01000019.1| GENE 136 138059 - 138562 580 167 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1951 NR:ns ## KEGG: GALLO_1951 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 167 1 167 167 277 100.0 9e-74 MVSYEKIRQSLRSWTLFIAWVNVLAVLAKIFTIISCFTLLNNLDTIKSTYDADTYQTIVA ATNIWNVIIMIVALIANIAIAFLAFKNLPKIKEDAPSLTPYRLGLVYTVVYNVAGIILAV VLGSTLSVTTFLLPVIFLALYGYVYAKAGQLLDKDEEENDEAVTEAE >gi|304425484|gb|AEEM01000019.1| GENE 137 138617 - 139714 1119 365 aa, chain - ## HITS:1 COG:SPy1846 KEGG:ns NR:ns ## COG: SPy1846 COG0389 # Protein_GI_number: 15675671 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 362 1 362 364 569 77.0 1e-162 MLIFPLINDISRKIIHIDMDAFFASVEERDNPDLKGKPVIIGSDPRKTGGRGVVSTCNYE ARKFGVHSAMSSKEAYERCPQAVFISGNYQKYRKVGMQIREIFKRYTDLVEPMSIDEAYL DVTENKLGIKSAIKIAKMIQYDIWKEVHLTCSAGVSYNKFLAKLASDFEKPKGLTLILPE DAQDFLKKLPIEKFYGVGKRSVEKLHQLGVFTGADLLEIPEMTLIDLFGRFGYDLYRKAR GISNSPVKSNRIRKSIGSERTYGKLLYEEDDVKSEISKNAQRVVDTLQRNHKVGRTIVLK VRYSDFSTLTKRITLDDVTNDFEVIDQVAKTIYDSLDESKLGVRLLGVTVTGLEDNIQPL NLFDN >gi|304425484|gb|AEEM01000019.1| GENE 138 139940 - 142264 2990 774 aa, chain + ## HITS:1 COG:SP0459 KEGG:ns NR:ns ## COG: SP0459 COG1882 # Protein_GI_number: 15900375 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pneumoniae TIGR4 # 3 772 5 774 774 1490 92.0 0 MATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAPATERSLKVKKI IEETKAHYEETRFPMDTRPTSIADIPAGYISKDDELIYGIQNDELFKLNFMPKGGIRMAE TALKEHGYEPDPAVHEIFTKHVTTVNDGIFRAYTSNIRRARHAHTVTGLPDAYSRGRIIG VYARLALYGADYLMKEKANDWNAITEIDEESIRLREEVNLQYQALGEVVKLGDLYGVDVR KPAMNVKEAIQWVNIAFMAVCRVINGAATSLGRVPIVLDIFAERDLARGTFTESEIQEFV DDFVLKLRTVKFARTKAYDELYSGDPTFITTSMAGMGADGRHRVTKMDYRFLNTLDNIGN APEPNLTVLWTDKLPYSFRRYCMKMSHKHSSIQYEGVTTMAKDGYGEMSCISCCVSPLDP ENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHKDYKVFDIDPVRDEVLDFETVKANFE KSLDWLTSTYVDALNIIHYMTDKYNYEAVQMAFLPTKQRANMGFGICGFANTVDTLSAIK YATVKPIRDENGYIYDYETTGDYPRWGEDDPRSNELAEWLVEAYTTRLRSHKLYKDAEAT VSLLTITSNVAYSKQTGNSPVHKGVYLNEDGTVNLSKLEFFSPGANPSNKARGGWLQNLN SLASLDFSYAADGISLTTQVSPRALGKTFDEQVDNLVTILDGYFENGGQHVNLNVMDLKD VYDKIMSGEDVIVRISGYCVNTKYLTKEQKTELTQRVFHEVLSMDDAAEAVAGK >gi|304425484|gb|AEEM01000019.1| GENE 139 142324 - 142761 316 145 aa, chain + ## HITS:1 COG:L67527 KEGG:ns NR:ns ## COG: L67527 COG0454 # Protein_GI_number: 15673798 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 1 145 1 146 147 132 48.0 2e-31 MKIKQTRNTLSDTYLDAVRIRQLVFVKGQGVPMSLEIDENEAYCLHFVLYDEKGQAAATC RILPNKDHSEATLQRMAVLPAYQGQNLGKLLLEDVIQFCQKQGFKRMVLHAQLTAKGFYD KLGFTCFGEEFEEAGIMHISMEKSL >gi|304425484|gb|AEEM01000019.1| GENE 140 143131 - 143745 912 204 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1955 NR:ns ## KEGG: GALLO_1955 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 204 1 204 204 307 100.0 1e-82 MANVLTVVFDVESEAYQAFSELKSFKQDNDTQIAQIALVKNEDGKITIKDSIDFDDASRD YATVGGIIGGLLGILSGPIGVIIGYGIGSLAGAASGSMTDASDNSLIEEVTTKLLDGDVA VIALVHEEDESILNHVFAPYKTNIMRWDALALAREVELAGQVQDELYDKVQEDLNERRLN RLKEQGNDIADAIKATFRRLRGKE >gi|304425484|gb|AEEM01000019.1| GENE 141 143844 - 144764 676 306 aa, chain - ## HITS:1 COG:SPy1850 KEGG:ns NR:ns ## COG: SPy1850 COG1680 # Protein_GI_number: 15675673 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Streptococcus pyogenes M1 GAS # 4 296 9 301 316 374 58.0 1e-103 MTNLLEIINNQINRNIYHGASLALFKDGQWSEHYIGTIDGVAPVKSGLIYDLASVSKVVG VGTVIISLLYQGKLELDAPLVRYYPDFHESSVTLRQLLTHSSGINPFIPNRDNLNAAELK EAINHITVESKKEFFYTDINFLLLGFMLEEIYGKSLDVIFKDEVFQPFGMTNTGFGPVKN AVPTVAGIGDGLVHDPKAKVLGVHSGSAGLFSNLQDLEKFCQHYLTDDFASDIWQNFSQA NKERSLAWNKEDDWLDHTGYTGTYVTINRKEQKAAIFLTNRTYAYDDRPLWIEERQRISQ WIQQNY >gi|304425484|gb|AEEM01000019.1| GENE 142 144761 - 145507 867 248 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1957 NR:ns ## KEGG: GALLO_1957 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 248 1 248 248 469 100.0 1e-131 MTLFDEVTFRHPVLRINNRDHNIEFYKKLGFKLVNEENAIAEFSTKQKNARFVIEESPAP DTHAVEGTKKVNKIVVKIPNADEVTAILGNGIAVERLFKGKNGYAFETLSPEGDLFLLHS EDDIQQLTEIDSVNFPKNDELKEVSDFSFESMTLNVADEAAARAFYNDVFEGQFPLDIQF VQAQGADLAVDPLETWDVEILECQVPDNYDLKALASFLESKGQTVYLDKKASVLVLSDPS NIEIWFIK >gi|304425484|gb|AEEM01000019.1| GENE 143 145855 - 146700 1302 281 aa, chain - ## HITS:1 COG:SPy1854 KEGG:ns NR:ns ## COG: SPy1854 COG0580 # Protein_GI_number: 15675676 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Streptococcus pyogenes M1 GAS # 1 281 34 314 315 422 77.0 1e-118 MDVTWTVKYITEFIGTALLIILGNGAVANVDLKGTKGNNSGWVIIALGYGFGVMIPALMF GNVSGNHINPAFTLALAVSGLFDWSHVPQYIIAQLLGAMFGQLLVVMTHKPYYLKTENPN AILGSFSTISAVDDGTKESHKAAWINGFLNEFLGSFVLFFGAMALTKNYFGAELVAKLTD YGYDATTAASQVAPYTTGSLAVAHLGLGFLVMTLVASLGGPTGPGLNPARDLGPRIVHAL LPKSVLGEHKGDSKWWYSWVPVIAPILAGIAAVALFKLLYL >gi|304425484|gb|AEEM01000019.1| GENE 144 146822 - 149101 2577 759 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1959 NR:ns ## KEGG: GALLO_1959 # Name: not_defined # Def: X-prolyl-dipeptidyl aminopeptidase # Organism: S.gallolyticus # Pathway: not_defined # 1 759 1 759 759 1543 100.0 0 MKYNQFSFIPRPIAIAEQELQALGFDITHQQADKKALENFCRKIFFNYKDTDYPLRQLIA DFETDLLTFFNSERPLTADIFYTISLQLLGFIPHVDFTNTTDFLEKIAFPINYQKGHILE ALYHLLVSRQKSGMTLLDDLISKGLIPVDNDYHFFNGKSLATFDTTDLIREVVYVQSPLD TDQDGQLDLIKVNIIRPKTSHQLPTMMTASPYHQGTNVVANDKKLYKMEGDLAVKPARTI NVETRDFESLAVPDVDLPVGESEERFNFIDPYTLNDYFLARGFANIYVSGVGTAGSDGFM TSGDYAQVESFKAVIDWLNGKAIAFSSHRRDQKVVADWASGLVCTTGKSYLGTMSTALAT TGIEGLKVIIAESAISSWYDYYRENGLVCSPGGYPGEDLDVLTELTYSRNLLTGDYLRNN AHYQELLDEQSAQLDRASGDYNQFWHDRNYLPHADKVKATCVFTHGLQDWNVKPRHIFNI FNALPDTVEKHAFLHHGEHVYMHNWQSIDFRESMNTLLSEKMLGQDNHFVLPTLIWQDNS QEQAWTSLAEFGSNNQATLALGTDQKIIDNHYAKAEFERYSKNFRTFKSELFTGKANAIC LDLPIEHDYHINGQITLHLTVKSSENKGILSAQVLDYGEKKRFKDVPSVLDLYAIDNGRN FSREALKELPFTKAKERVITKGVLNLQNRTDLLTIEDIPANEWMTIDFTLQPSIYKLEKG DTLRVLLYTTDFEHTIRDNSNYILTVDLDQSSIELPVEQ >gi|304425484|gb|AEEM01000019.1| GENE 145 149306 - 150958 1132 550 aa, chain - ## HITS:1 COG:CAC1701 KEGG:ns NR:ns ## COG: CAC1701 COG0642 # Protein_GI_number: 15894978 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 65 547 70 562 566 255 32.0 2e-67 MVKKIFRSTLFVTLGILLSATLLIMGVLYSYFTQVQKEQLQTETVLVAQGVALEGDSYFN TLNVSGLRITWVDNEGNILYDNQSDATKMDNHANRKEIKEALKDGYGESTRYSATLTTKS LYIAQRLDDGTVIRLSITQHSILLLFIRMFQPLALIIILAIFLSVWVARYTAKRVVAPLN DLNLDQPLQNDTYDEISPLLRRIDYHQKELAKQEALLNQKRDEFDTIISKIKEGIILLDA QCRVISINSAAQELFQTDQSCLGNDILQITRDLSFNHWLESGLQGNKQEGVLQFDQESYK VLIRPILSNGVVTGLVVLLVDVTEQLQIEKLRHEFTANVSHELKTPLHVISGYSEMLVNG LVSANDIPHFAGKIYNESQRMVQLVEDIINLSHLDETDQVPMEELDIYAIAQNVLESLST KASQRQIGLHLKGQPTTITGNSALIHSVLYNLCDNAITYNRDKGAVDVTISSNEDNVFLE VKDTGIGISKEEQERIFERFYRIDKSRSRKLGGTGLGLSIVKHALKLHDASIHIQSQLNH GTRMLLTFKK >gi|304425484|gb|AEEM01000019.1| GENE 146 150951 - 151628 710 225 aa, chain - ## HITS:1 COG:CAC1700 KEGG:ns NR:ns ## COG: CAC1700 COG0745 # Protein_GI_number: 15894977 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 2 220 6 227 232 182 42.0 4e-46 MIYCVEDDDDIRELMLYTLKTTGFVAQGFPNAELFWQAIESQKPDLILLDIMLPGSDGLS ILEELKGKMSTADIPVIMATAKGTEFDKVKGLDMGSDDYLVKPFGMMEMISRIKAVLRRS QKSQRKQILQVGNLSLDIQNYTVKKDGKDISLTLKEFELLGLLMKYPNRVFTRQELLNQV WGEYFVGETRTVDVHIGTLRTKLGDASHLIKTIRGVGYRLEEENG >gi|304425484|gb|AEEM01000019.1| GENE 147 151628 - 152278 672 216 aa, chain - ## HITS:1 COG:PA5365 KEGG:ns NR:ns ## COG: PA5365 COG0704 # Protein_GI_number: 15600558 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Pseudomonas aeruginosa # 2 210 11 221 242 110 33.0 2e-24 MIRSKFENQLQELTKNVIFMGALCEDVISKSVQFLKTDDSYLVNNVIKTYQKIEQLERDI EEQCLKLLLRQQPVAKDLRRVSAVLKMVYDMKRIGAQAAEIGEIINQGHIQPGRELDHLQ SMVSHVVEMVTISIDAFVHDDESLANQVIQNDNTVDQEFDTIKMDLMTYFSGSDVDGEHA IDVLMVAKYIERIGDHTVNIAKWIIFSITGQLEGDD >gi|304425484|gb|AEEM01000019.1| GENE 148 152275 - 153027 213 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 225 1 216 311 86 28 1e-15 MMSKLIIDNLDLYYGEFHALKSIHLEIPANEITAFIGPSGCGKSTLLKSLNRMNDLVKDC RITGKVLLDGEDIYCDLDINKLRKKVGMVFQKPNPFPMSIYDNIAFGPRTHGIHAKTELD EIVERSLKQAAIWDEVKDRLSKSAMGLSGGQQQRLCIARALAIEPDVLLMDEPTSALDPI STSKIEDLVIELKKKYSIVMVTHNMQQAVRISDKTAFFLMGEVVEFNKTSQLFSLPQDER TENYITGRFG >gi|304425484|gb|AEEM01000019.1| GENE 149 153017 - 153895 820 292 aa, chain - ## HITS:1 COG:SP2086 KEGG:ns NR:ns ## COG: SP2086 COG0581 # Protein_GI_number: 15901902 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 23 285 4 266 271 242 53.0 5e-64 MENINQRTLKQRAASRRQDFVSFILFGLVYFAAFLSFLVIIFIVGYILVKGVPHLNKALF SFTYTTENVSLLPALINTLFITGLTLLIAIPIGIGGSIYLTEYAKKGNPIVNIIRIATET LSGIPSIIYGLFGALFFVKYVHFGLSLLSGSMTLSIMILPLVMRTTEEALLSVPTSYREG AFALGAGKLRTIFKIVLPSAIPGIFSGIILAIGRIIGESAALIFTAGTVAEVAKNVFSSS RTLAVHMYAISGEGLYINQTYATAVVLLLLVIGINFLSGLVAKRLGSEMNDE >gi|304425484|gb|AEEM01000019.1| GENE 150 153901 - 154554 577 217 aa, chain - ## HITS:1 COG:SP2085 KEGG:ns NR:ns ## COG: SP2085 COG0573 # Protein_GI_number: 15901901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 213 69 280 287 249 68.0 3e-66 MIVGSLYVTLGALVIGVPIGILTAVFMAYFCPNKLYKPLKAGINLMAGIPSVVYGFFGLV VLVPFVRDYIGGYGMGVLTAAILLGIMILPTIVSVSETAIRAVPHHYYEGGLALGASHER SIFFVVLPAAKRGLLAAIILGLGRAVGETMAVIMVAGNQAILPKALTSGVRTLTTNIVME MGYSTGLHREALIGTAVVLFIFVLIINICFSLLHKEE >gi|304425484|gb|AEEM01000019.1| GENE 151 154756 - 155625 1178 289 aa, chain - ## HITS:1 COG:SP2084 KEGG:ns NR:ns ## COG: SP2084 COG0226 # Protein_GI_number: 15901900 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 287 1 290 291 185 45.0 8e-47 MKKWKMLMLLAFVGVGVVLTACSKSNSSESKQISVVSREEGSGTRGAFIDLFGLEEKNSS GDTVDLTTANAIVTNSTSVTLTTVAGDDLAIGYASLGSLNDSVKVLKIDGTKASVETIKD GSYKISRPFNIVTKEDISKAAKDFINFILSSDGQAIVEENGYIPLDNVDTYQASVTSGKV VISGSSSVTPVMEKLKEAYTKVNSGVTIEIQQSDSSTGITDTIDGTSDIGMASRELEDSE IAQGVNSTVIAMDGIAVIVNKNNTIDNLTSEQVKSIFSGEITTWKELSD >gi|304425484|gb|AEEM01000019.1| GENE 152 155887 - 156165 360 92 aa, chain + ## HITS:1 COG:SPy1862 KEGG:ns NR:ns ## COG: SPy1862 COG0718 # Protein_GI_number: 15675681 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 4 92 11 99 99 109 80.0 1e-24 MKQAQKMQKQLEKKQAELAETSFTGKSAQDLVTVTFIGDKKLVAIEYKEGVVDPEDIETL QDMTTQAINDALSQIDEATKKTMGAFAGKLPF >gi|304425484|gb|AEEM01000019.1| GENE 153 156522 - 157349 626 275 aa, chain + ## HITS:1 COG:SPy1366 KEGG:ns NR:ns ## COG: SPy1366 COG2339 # Protein_GI_number: 15675298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 16 266 14 263 269 120 32.0 2e-27 MKTFLTKNRSNIVILILLILSISGLNADITALAKSNEHGNLYPTFFLATSLTLIYIIPFI VLTLYLKKRFNMPSPAFWMSWFFGLAIPANLGSLGNSGLSFILLNLNLPKEFIDNWGGAL TAPFTEEISKGLVVLLIVLLLRQISLKSALVMGMIAGMGFQIVEDRFYIFQDLFQNNGNG YSMALERIASSGVSHWVFSGTFALGLIILISRTTAVSKKQGVFFLLAPVAMHFMWNSPLD FSNIDTVYGTINWLILIYAFKTADALPPEKALVSL >gi|304425484|gb|AEEM01000019.1| GENE 154 157441 - 158172 659 243 aa, chain - ## HITS:1 COG:SPy1863 KEGG:ns NR:ns ## COG: SPy1863 COG0789 # Protein_GI_number: 15675682 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 243 1 239 245 273 57.0 2e-73 MSRSYTTGDLAKLAGVSVRTVQYYDKRGILSPSDLTEGGRRIYVDSDLEQLRMICFLREL DFSIEQIKRLFAEENARQVLELLLVEHIKETKRELAEKKAKLDTTVNLLDKVKNQTGQSL EFLSDISLTMKNQLAWCRLQKRMWISNLATILIFVLCVAWLENRPQSVVWQGVSIGIGLV YVGTLLTLSYHFSRKVAYICPNCHQLFQPTYREFAFARHTPKTRKLTCPHCHEKSYCLEL AKE >gi|304425484|gb|AEEM01000019.1| GENE 155 158275 - 158862 684 195 aa, chain - ## HITS:1 COG:SPy1864 KEGG:ns NR:ns ## COG: SPy1864 COG0847 # Protein_GI_number: 15675683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Streptococcus pyogenes M1 GAS # 1 194 14 207 208 266 72.0 1e-71 MEKLAEYIAFDLEFNTVAEKSHIIQVSAVKFKEGHEVDSFDTYVYTDVPLQSFINGLTGI TSEKIANAPKLDEVLADFKTFVGETALVGYNALKSDLPLLAENELDLTELYKVDLYDEAF ERRSTDLNGIANLKLTSVAEFLGISGHGHNSLEDARMTALVYEKFMEFDENKSYLNQQEE EHGDNPFAALGGFFS >gi|304425484|gb|AEEM01000019.1| GENE 156 158935 - 159468 613 177 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1970 NR:ns ## KEGG: GALLO_1970 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 177 1 177 177 204 100.0 1e-51 MAIEKTVSELAEILGVSRQAVNNRVKSLPEEDVDKNEKGVTVVNRSGLIKLEEIYKKTIF EDEPIDEETKQRELLEILVDEKNTEITRLYEQLKAKDKQLASKDEQLRVKDVQISEKDKQ LDQQQQLTLAAMEDTKRLQLELNEAKAEVEEIQTKSEEKIQEEAAPKGFLARLFGGK >gi|304425484|gb|AEEM01000019.1| GENE 157 159689 - 160861 924 390 aa, chain + ## HITS:1 COG:SPy1866 KEGG:ns NR:ns ## COG: SPy1866 COG2081 # Protein_GI_number: 15675685 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Streptococcus pyogenes M1 GAS # 1 386 1 386 389 620 79.0 1e-177 MNTYDTIIIGGGPAGMMAAISSSYYGNQTLLIEKNKRLGKKLAGTGGGRCNVTNNGTIDD LMEGIPGNGRFLYSVFSQFDNHDIIRFFEENGVALKVEDHGRVFPKTDKSKTIIDALAHK INELGGTVLTNTEVVSVKKIDNLFHVKSATDEFICGKLIVTTGGKAYPSTGSTGFGYEIA RHFKLNLTELEAAESPLLTDFPHKELQGISLDDVCLSYQKHHITHDLLFTHFGLSGPAAL RLSSFIKGGETITLDLIPKLSTEELHTFLAEQREKSLKNALKVLLPERLASFLAQPFPEK VKQLTPQQEKELVDNIKELPIKVTGKMSLAKSFVTKGGVNLKEINPKTLESKQVPGLYFA GEVLDINAHTGGFNITVALCTGWVAGSLHY >gi|304425484|gb|AEEM01000019.1| GENE 158 160992 - 161261 438 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225869236|ref|YP_002745184.1| 30S ribosomal protein S14 [Streptococcus equi subsp. zooepidemicus] # 1 89 1 89 89 173 92 8e-42 MAKKSKIARYNRQLKLIEQYADLRRELKAKGDYEALRKLPRDSNPNRLKNRDRIDGRPHA YMRKFGVSRINFRDLAHKGQLPGVKKASW >gi|304425484|gb|AEEM01000019.1| GENE 159 161326 - 161805 334 159 aa, chain - ## HITS:1 COG:SA2355 KEGG:ns NR:ns ## COG: SA2355 COG0454 # Protein_GI_number: 15928147 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Staphylococcus aureus N315 # 1 154 1 156 162 137 44.0 1e-32 MQISIFEPKFNQAVIDLILTIQQEEFSLPISLTEQPDLLDIENSYQKQGGQFWVAINERK EVLGCIGLAALEQDNVALKKMFVSKNYRKAGLGKELLKVFVAYCQKEQKKTIFLGTTTDF EAAQHFYRKFGFQAIESSNLPADCPRLAVDNRFYTYIIN >gi|304425484|gb|AEEM01000019.1| GENE 160 161815 - 162840 909 341 aa, chain - ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 1 341 1 341 341 434 59.0 1e-122 MLHFENDYNKGIHPQLLQALVDSNQESFAGYGMDSYCAQAAEKIKEACHCPEAEIFFLSG GTQTNQVVIDSLLTSYEGVIAAETGHVSTHEAGAIEFTGHKVLTLSSHQGKIQAAELAAY VDNFYHDGNHDHMVFPGMVYISHPTEYGTLYTKEELTAISDVCRQYQLPLFIDGARLGYG LAAKETEVNLPTIAALSDVFYIGGTKMGAFIGEAVVFTKQNTPKRFVTTVKQHGALLAKG WLIGVQFDRFFTDNLYFEIGEHAIKMAEQLKDILREKGYRFYLESPTNQQFIIIENAKLA TLGEVLAYSFWEKYDDTHTVIRLATSWSTTQEDIDKLREVL >gi|304425484|gb|AEEM01000019.1| GENE 161 162949 - 163350 404 133 aa, chain + ## HITS:1 COG:BH3077 KEGG:ns NR:ns ## COG: BH3077 COG1846 # Protein_GI_number: 15615639 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 1 132 1 132 150 94 36.0 3e-20 MFDIIRTIGAVTRTIQIDSNNHFKELGLNNNLFIYIIRVCEKPGMFLGELADNVQIDRTT AFRTIKKLATLGYFELKKDAVNQKIKRVYPTEKAMDIYPQLHEYEQKQSDFLLSNLSTEE IAQLKQLMAKLKY >gi|304425484|gb|AEEM01000019.1| GENE 162 163339 - 163665 291 108 aa, chain - ## HITS:1 COG:lin1481 KEGG:ns NR:ns ## COG: lin1481 COG4392 # Protein_GI_number: 16800549 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 107 1 107 108 67 43.0 4e-12 MSVSSYVLVAILLGFVVSWVPRVAPFILVKYKGLPEIVIRFLKYLPVSILFALTFSSLFD VEIGHLPQVKDLEVLASLPTFYVALKSKNLLYAVITGIVSMAILRLIF >gi|304425484|gb|AEEM01000019.1| GENE 163 163655 - 164350 839 231 aa, chain - ## HITS:1 COG:SP0146 KEGG:ns NR:ns ## COG: SP0146 COG1296 # Protein_GI_number: 15900084 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Streptococcus pneumoniae TIGR4 # 14 229 1 216 218 205 55.0 6e-53 MQEKGFKAGLQDALPTALGYISIGLAFGIVASASELSALEVGLMSLLVYGGSAQFAMCAM LLAHADLASVTLTVFLVNLRNMLMSLHATTIFTKTSFLNNIGIASLITDESYGVLLGENV HNKSIAASWMYGNNLLSYAAWVLSTIVGTLLGGIIPNPESFGLDFALIGMFIGLLVFQFD AMLSEGIKKLLLVLAAVAISFLVCAVFLSSALAVLVSTLIGCSVGVMLDER >gi|304425484|gb|AEEM01000019.1| GENE 164 164495 - 165505 1357 336 aa, chain - ## HITS:1 COG:SP0129 KEGG:ns NR:ns ## COG: SP0129 COG0533 # Protein_GI_number: 15900071 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Metal-dependent proteases with possible chaperone activity # Organism: Streptococcus pneumoniae TIGR4 # 1 336 1 336 336 548 82.0 1e-156 MKDRYILAVESSCDETSVAVLKNESEILSNIIASQIESHKRFGGVVPEVASRHHVEVITT CFKDALDAAGIEASDLDAVAVTYGPGLVGAILVGMAAAKAFAWAHHLPLIPVNHMSGHLM AARQVKELAYPLMALLVSGGHTELVYVSEPGDYKIVGETRDDAVGEAYDKVGRVMGLTYP AGREIDQLAHQGKDIYDFPRAMIKEDNLEFSFSGLKSAFINLHHNAAQKGETLSKEDLSA SFQTAVLDVLMAKTKKALEKYPVKTLVVAGGVAANQGLRERLADEITEAEVVIPPLRLCG DNAGMISLAAAIEYDKGHFADLDLNAKPSLAFDSLD >gi|304425484|gb|AEEM01000019.1| GENE 165 165515 - 165955 325 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15902174|ref|NP_357724.1| ribosomal protein alanine acetyltransferase [Streptococcus pneumoniae R6] # 1 145 1 144 145 129 47 1e-28 MSNVSNMKDLSEKVTAVYAILSDVYEVSPWTKKQILADMQQDSVDYFFVEKDKEMVGFLA IQQLVGELEITNIAVKKAYQGCGLGSQLLTNLDQIDFPIFLEVRASNTSAQALYQKFGFK VIGERKRYYHNPIEDAIIMKREGNER >gi|304425484|gb|AEEM01000019.1| GENE 166 165939 - 166628 288 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 43 215 2 185 380 115 40 2e-24 MKVLAFDTSSKALSVAILDGKNLLADVTVNIKKNHSITLMPAIDFLMTSVDLQPSDLDRI VVAQGPGSYTGLRVAVATAKTLAYTLNIELVGVSSLYALAAAADLDGLVVPIMDARRNNV YAGFYKNGQSVKADQHMSFTAVLKAVKAEAKVMFVGEVDNFRDQIEEALPQAVILPVLPS AYAIGNYGQSLEPADVDSFVPNYLKRVEAEENWLKTHKEDSTADYVKRI >gi|304425484|gb|AEEM01000019.1| GENE 167 166809 - 167039 394 76 aa, chain + ## HITS:1 COG:SPy1875 KEGG:ns NR:ns ## COG: SPy1875 COG5503 # Protein_GI_number: 15675694 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Streptococcus pyogenes M1 GAS # 1 76 1 76 76 100 78.0 9e-22 MIYKVFYQETKERNPRREQTKVLYLDIDATTELEGRIKTRKLVEEKTPYNVEFIELLSDK HLAYEKETGVFKLTEL >gi|304425484|gb|AEEM01000019.1| GENE 168 167041 - 168723 2182 560 aa, chain + ## HITS:1 COG:SPy1876 KEGG:ns NR:ns ## COG: SPy1876 COG0595 # Protein_GI_number: 15675695 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 559 1 559 560 1039 91.0 0 MSQINLKPEEVGVYAIGGLGEIGKNTYGIEYKDEIIIVDAGIKFPEDDLLGIDYVIPDYS YIVENIDRIKGLVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDAK LYEINANTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDWTPVGEPADI HRMAALGEDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRL QQAAEAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPKGTFIEPSELKDYHASEILIMCT GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINTIQEAGVEVIHG KVNNIHTSGHGGQQEQKLMLRLMKPKYFMPVHGEYRMLKIHAGLAMDTGVPKDNIFIMEN GDVLALTANSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRHDLSEDGVVLAVATVDFDTQ MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL YEKTEREPIIIPMILTPDEK >gi|304425484|gb|AEEM01000019.1| GENE 169 168989 - 169612 815 207 aa, chain - ## HITS:1 COG:SPy0019_2 KEGG:ns NR:ns ## COG: SPy0019_2 COG3942 # Protein_GI_number: 15674263 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 89 204 26 134 135 107 52.0 1e-23 MNRKTQLALATATVSGALLFSQVNTDADTYTLQSGDSFYSVSQLYGMDVYDLAALNGMSI YDTIVPGQTLQVPDQVSVETTSTEEVATETSTNSDNTYPVGQCTWGVKELATWASNWWGN AGDWAANAALQGYTVGTQAEVGAIICWTDPDSYGHVAYVTAVSASGEIQVLESNYGDKQW IDNYRGWFDPTNSQTAGTVSYIYPTTY >gi|304425484|gb|AEEM01000019.1| GENE 170 169806 - 171245 2186 479 aa, chain - ## HITS:1 COG:L114827 KEGG:ns NR:ns ## COG: L114827 COG0493 # Protein_GI_number: 15673267 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Lactococcus lactis # 1 473 1 473 479 670 65.0 0 MANPFGFLKYERKDNPFRPVAERILDFEELQVPLSEEDRQKQAARCMACGIPFCHSGQFY GGGRAVSGCPNDNLIPEWNDLLYKGDYKRAFERLSRTNPFPEMTGRVCPAPCEKGCTEGL NGSGVTIHDNERFIIDTAFENGWVEESGRPAYRTGFKVAVIGSGPAGLSTAWRLNKLGHT VTVYERSDRFGGLLMYGIPNMKLDKEIVQRRIDLMEKLGINFVANTEVGRDVTADELLKQ YDRVVLATGASVPRDLDVPGRHLSGVRFAVDFLTETTKNVLASDNKKLGPTLEGKHVLVI GGGDTGNDCIGTAVRLGAASVKQLEITPEPPEKRLPTNPWPQYPMIKRVGYGQEEANFVQ DTELTTHATSTTEFIGADRGQVIAAKTIKVGPGFKPIEGTEEIIKADLVLLAMGFTGAEK SLFEQFGVQSVYDDYSTNNDRVFVAGDARRGPSLVIWGIREGRKAAEKIDQGLRIMVAQ >gi|304425484|gb|AEEM01000019.1| GENE 171 171247 - 175764 5499 1505 aa, chain - ## HITS:1 COG:L0119_2 KEGG:ns NR:ns ## COG: L0119_2 COG0069 # Protein_GI_number: 15673268 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Lactococcus lactis # 377 1170 1 789 791 1071 65.0 0 MNESALRAQQTTLWDPSFESDACGMGFVAQLDGKASHTLIDYALTMLTRMNHRGGTGAEP DTGDGAGMLLALPDEFFQLKAKEAGYVLPKKGDYAVAQLFLPQDTEAKVSLLEAVKAEIK LAGFHVLMTRDVPFNYDNCGPAAQEIMPSFVQVFVKKPDDTKAGRDFEDKLFRLRRQLEK SFSADEFFICSLSSKTIVYKGMLHAFQVGLFYPDLQDEHFKSHIALTHSRFSTNTFPSWD RAQPFRFLAHNGEINTLRGAENWMHSHQIEVYNEENSDSAKLENCLEYLYRNGRDIPQSL LMMVPEAWGDESGLSDDLKAFYEYASSFVAPWDGPAALVFTDGDMVGARLDRNGLRPSRY SLTKDNFLICSSESGVVDLEPSRVIEKGVLGPGNMMLIDTTSGKLMRNEEVKAYYAAQHP YKEWVDENIAHLNDFEAAELTQETNDIETMWKAYGYNEEVIRTVILPMSEKGEEPVISMG FDSPLAVLSNKSQSLFTFFKQQFAQVTNPPIDAIREQIVVSTSVYLGGDGNFKADGADNC VKVKIDSPVLSSQDFAKIANLKDDRYCATTLSTVYDVVEPSHNRLQRALENLFKAAEKAV DNGSKIIILSDRNVKENQTTIPMLLAVSGLNNYMVVKGKASQFSIVVDTAEAIEVHHFAT LVGYGAAAVHPYGAYATLKEYGKDELAFEKYRKAAEKGIVKVMSRMGISTILGYKGAQLF EAVGLSDSVVNKYFTGTVTRIGGLSLDQIEKEYLQRMEDAFGPRRGDYLQSGGIYQFKAD GEYHLFNPHTIYNFQQAVRKGDYKLFKEYTAELDKEALSTPTTLRSIWEFKSDRPKVDLS EVEPAETIVKRFKVGAMSFGSLSKEAHETIAEAMNSIGAKSNSGEGGENRNRFKVQPDGR NLNSKIKQVASGRFGVNAEYLMSAEELQIKLAQGAKPGEGGQLPGQKVFPWVAEIRGATP GVRLISPPPHHDIYSIEDLAQLIYDLKAINPYAKINVKLVSSTGVGTIATGCVKAGADKV VISGYDGGTGASPRNSVRDAGLPWEMGLAEAHQTLSLNRLRQRMTLETDGKLMTGRDVAI ATLLGAEEYSFASLALISIGCVMMRVCSLNTCPVGVATQNPELRKHFAGKPEHVINMMMF MAEELREYMAELGFRSVDEMVGHSEILKAKFIPKGKAKSLDFSRMLGTAYPIDRKTEDPF AEARQWKELDGFAKAAVDNGASVTVKESINNVQRAVGARMAGWMAERYGNDTVEPGLIKY EYTGIAGQSFASFITQGMELTLVGEANDYIAKSMSGGRLIVKPPHDAAYDVENSPIVGNV ALFGAVKGEAYFAGRAGERFCVRNSGAKVVVEGVGAHGCEYMTGGVAVILGTTGRNFAAG MSGGVAYVYDVDGDFAEKVNQEMVDLYKVGETRGDDVLVDMIQKHYEYTGSAKAKRLLDN WAQEVDKFIKVYPTEFHEINNIEYALANTGLEGDELELRTFEIATGGAETAAKKEELLAQ VTGGK >gi|304425484|gb|AEEM01000019.1| GENE 172 175942 - 177288 1679 448 aa, chain - ## HITS:1 COG:SP0502 KEGG:ns NR:ns ## COG: SP0502 COG0174 # Protein_GI_number: 15900416 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 448 1 448 448 841 88.0 0 MTITAADIRREVKEKNVTFLRLMFSDIAGTLKNVEIPATDEQLDKVLSNKAMFDGSSIEG FVRINESDMFLHPDLDTWTVFPWGGENGAVAGLICDIYTAEGEPFAGDPRGNLKRALRHM EKVGFKSFNLGPEPEFFLFKLDEKGEATLEVNDRGGYFDLAPTDLADNTRREIVNVLTEM GFEVEASHHEVAVGQHEIDFKYADVLKACDNIQIFKLVVKTIARKHGLYATFMAKPKFGI NGSGMHCNMSLFDYDGNNAFYDTEDPKGMQLSETAYYFLGGLMKHAYNYTAIMNPTVNSY KRLVPGYEAPVYIAWAGRNRSPLIRVPASRGMGTRLELRSVDPTANPYLALAVLLEAGLD GIENKIEAPAPVESNIYVMTEEERKEAGIRDLPSTLHNAVKALQEDEVVKAALGEHIFVN FVEAKKIEWSSYAAFVSQWEIDNYLDLY >gi|304425484|gb|AEEM01000019.1| GENE 173 177338 - 177709 458 123 aa, chain - ## HITS:1 COG:SPy1878 KEGG:ns NR:ns ## COG: SPy1878 COG0789 # Protein_GI_number: 15675697 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 123 1 123 123 181 82.0 3e-46 MKEKELRRSMAVFPIGTVMKLTDLTARQIRYYEDQGLITPERTSGNRRMYSLNDMDRLLE IKDFLDEGLNIAAIKREYAERQDKAHQKQKSLTDADVRRILQDELRNQGRFSAPSQYISN WRI >gi|304425484|gb|AEEM01000019.1| GENE 174 177798 - 178334 251 178 aa, chain - ## HITS:1 COG:SPy1879 KEGG:ns NR:ns ## COG: SPy1879 COG4129 # Protein_GI_number: 15675698 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 171 183 231 74.0 5e-61 MNYLKNLLSNYKFDPSKFKLGMRTFKTGLAVFLVLLIFHLFGWEGLQIGTLTAVFSLRES LDKSVHFGFSRVVGNSVGGLLSLLFFFINQFFHNQFWVTLIFVPIFTMLGIMINVSINNK AGIIGGTSALLIITLSIPAGDTILYVFARVFETFCGVFVAILVNSDVDKIRGLLRKKS >gi|304425484|gb|AEEM01000019.1| GENE 175 178563 - 179759 1830 398 aa, chain - ## HITS:1 COG:SP0499 KEGG:ns NR:ns ## COG: SP0499 COG0126 # Protein_GI_number: 15900413 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 398 1 398 398 674 93.0 0 MAKLTVKDVDLKGKKVLVRVDFNVPLKDGVITNDNRISAALPTIKYIIEQGGRAILFSHL GRVKEEADKEGKSLAPVAADLAAKLGQEVVFPGVTRGAELEEAINNLKDGEVLLVENTRF EDVDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLEN EIAYIQEAVEKPVRPFIAILGGSKVSDKIGVIENLLKKADKVLIGGGMTYTFLKAQGIEI GNSLVEEDKLDVAKELLAKADGKLILPVDSKEANAFADYTEVKDTEGAAVDAGFLGLDIG PKSIAKFDEELTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQPGVKSIIGGGDSAAA AINLGRADKFSWISTGGGASMELLEGKVLPGLAALTDK >gi|304425484|gb|AEEM01000019.1| GENE 176 179947 - 180960 1414 337 aa, chain - ## HITS:1 COG:L0005 KEGG:ns NR:ns ## COG: L0005 COG0057 # Protein_GI_number: 15674228 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Lactococcus lactis # 1 337 1 336 336 555 86.0 1e-158 MVVKVGINGFGRIGRLAFRRIQNVEGVEVARINDLTDPAMLAHLLKYDTTQGRFDGDVVV KDGGFEVNGQFVKVSAERDPEQIDWANDGVEIVLEATGFFATKAAAEKHLHEGGAKKVVI TAPGGSDVKTIVFNTNHEILDGTETVISAGSCTTNCLAPMADALNKSFGLKVGTMTTVHG YTGDQMTLDAPHRKGDFRRARAAAENIVPNSTGAAKAIGLVIPELNGKLQGHAQRVPVPT GSLTELVSVLDKKVTAEEVNAAMQAAATESFGYNTDPIVSRDIVGISFGSLFDATQTEVT EAADGTQLVKTVSWYDNEMSYTSQLVRTLEYFAKIAK >gi|304425484|gb|AEEM01000019.1| GENE 177 181165 - 183243 2753 692 aa, chain - ## HITS:1 COG:SP0273 KEGG:ns NR:ns ## COG: SP0273 COG0480 # Protein_GI_number: 15900207 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Streptococcus pneumoniae TIGR4 # 1 692 1 692 693 1286 94.0 0 MAREFSLEKTRNIGIMAHVDAGKTTTTERILYYTGKIHKIGETHEGASQMDWMEQEQERG ITITSAATTAQWKDYRVNIIDTPGHVDFTIEVQRSLRVLDGAVTVLDSQSGVEPQTETVW RQATEYGVPRIVFSNKMDKIGADFLYSVSTLHDRLQANAHPIQLPIGSEDSFNGIIDLVK MKAEIYTNDLGTDILEEDIPAEYVDQANEYREKLIEAVAETDEELMMKYLEGEEITEAEL KAAIRKATINVEFFPVLCGSAFKNKGVQMMLDAVIDYLPSPLDIPAIKGVNPDTDEEEER PASDEEPFAALAFKIMTDPFVGRLTFFRVYSGVLNSGSYVLNTSKGKRERIGRILQMHAN HRNEIETVYAGDIAAAVGLKDTTTGDSLTDEKAKVILESIEVPEPVIQLMVEPKSKADQD KMGIALQKLAEEDPTFRVETNVETGETVISGMGELHLDVLVDRMKREFKVEANVGAPQVS YRETFRQATQARGFFKRQSGGKGQFGDVWIEFTPNEEGKGFEFENAIVGGVVPREFIPAV EKGLQESMANGVLAGYPMVDVKAKLYDGSYHDVDSSETAFKIAASLALKEAAKTAHPVIL EPMMLVTITAPEENLGDVMGHVTARRGRVDGMEAHGNSQIVRAFVPLAEMFGYATVLRSA TQGRGTFMMVFDHYEDVPKSVQEEIIKKNSGE >gi|304425484|gb|AEEM01000019.1| GENE 178 183444 - 183914 782 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|171779185|ref|ZP_02920156.1| hypothetical protein STRINF_01033 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 156 1 156 156 305 98 1e-81 MSRKNRAPKREVLPDPLYNSQLVTRLINRVMLDGKRGTAASIVYDAFEQIKEATGNDALE VFETAMENIMPVLEVRARRVGGSNYQVPVEVRPERRTTLGLRWLVTASRARGEHTMKDRL AKEILDAANNTGASVKKREDTHRMAEANRAFAHFRW >gi|304425484|gb|AEEM01000019.1| GENE 179 183904 - 183990 95 28 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|94991745|ref|YP_599844.1| 30S ribosomal protein S12 [Streptococcus pyogenes MGAS2096] # 5 28 124 147 147 41 83 2e-66 MLIVNKAVLNTVLNVLKDNRRGIRKNES >gi|304425484|gb|AEEM01000019.1| GENE 180 183935 - 184348 681 137 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55821763|ref|YP_140205.1| 30S ribosomal protein S12 [Streptococcus thermophilus LMG 18311] # 1 137 1 137 137 266 97 5e-70 MPTINQLVRKPRKSKVEKSKSPALNVGYNSHKKVQTNVSSPQKRGVATRVGTMTPKKPNS ALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGV ADRKQGRSKYGAKRPKG >gi|304425484|gb|AEEM01000019.1| GENE 181 184640 - 185452 1027 270 aa, chain - ## HITS:1 COG:SPy0268 KEGG:ns NR:ns ## COG: SPy0268 COG0503 # Protein_GI_number: 15674448 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 1 270 1 270 279 417 87.0 1e-116 MKLRRSERMVVISNYLINNPYKLTSLNTFAEKYEAAKSSISEDIAIIKKAFEESGIGEIE TVTGASGGVIFTPGISDEEAKAVIEELRDRLSESNRILPGGYIYLSDLLSTPKILQSVGR IIANAFKGNKIDAVMTVATKGVPLANAVANILNVPFVIVRRDLKITEGSTVSVNYASGSS DRIEKMFLSKRSLKPNSRVLIVDDFLKGGGTISGMVSLLKEFDSTLVGVAVFAENAQEKR DRMTYKSLLKVSEIDVKNNHVKVEIGNIFD >gi|304425484|gb|AEEM01000019.1| GENE 182 185599 - 186537 1028 312 aa, chain - ## HITS:1 COG:SPy0267 KEGG:ns NR:ns ## COG: SPy0267 COG3481 # Protein_GI_number: 15674447 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 310 1 310 312 566 88.0 1e-161 MKINQMKKDELFEGFYLIKSAELRKTRAGKDYIAFIFQDDTGEISGNLWDAQPYNVEEFV AGKVVYMKGRREVYNGTPQVNQITLRNPREGEPNDPSDFREKSPVDVVDVKDYLEQMMFK IENAVWQRVVRALYRKYDKEFFTYPAAKTNHHAFESGLAYHTATMVRLADAIGDIYPQLN KSLLYAGIMLHDLAKVIELTGPDNTEYTVRGNLIGHIALIDEEITKVLTELNIDDTKEDV IILRHVILSHHGLLEYGSPVRPRVMEAEIIHIIDNIDAEMMMMTTALSRIDEGEMTNRIF AMDNRSFYKPKL >gi|304425484|gb|AEEM01000019.1| GENE 183 186527 - 187801 1251 424 aa, chain - ## HITS:1 COG:SPy0266 KEGG:ns NR:ns ## COG: SPy0266 COG1322 # Protein_GI_number: 15674446 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 18 424 18 423 423 556 78.0 1e-158 MLIITLLLGLLSVVLLIYLLLKMAKLTEDVSQKLDDNADNLSDQVSYQLDLAQKDQVLAL NNQINRLQNDLYTQLNDIRDVLHQSLNENRDRSDQRLEIINRNLTNSVKEMQESNEKRLE EMRQTVEEKLEQTLQNRLKASFETVSKQLESVNQGLGEMKNVAQDVGTLNKVLSNTKTRG ILGELQLGQIIEDIMTPNQYEREFPTVSGSSERVEYAIKLPGTDDDGYVYLPIDSKFPLE DYYRLEDAYESGDKEQVELYRKSLLNSIKRFAKDINKKYLNPPETTNFGIMFLPTEGLYS EVVRNASFFDSLRRDENIVVAGPSTLSALLNSLAVGFKTLNIQKNANDISKILGNVKVEF EKFGNMLVKAQKQINTANNTLDSLISTRTNAIIRALNTVESYQDQATASLLNLLPLEDEE NHEN >gi|304425484|gb|AEEM01000019.1| GENE 184 187803 - 188432 563 209 aa, chain - ## HITS:1 COG:SPy0265 KEGG:ns NR:ns ## COG: SPy0265 COG1564 # Protein_GI_number: 15674445 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Streptococcus pyogenes M1 GAS # 1 208 1 208 210 277 65.0 1e-74 MTKIAIFAGGRLSDFSTDFELFVGVDRGSLFLLKNQLPLDLAVGDFDSVSKEELQMIQEE AGDFIKAAPEKDDTDTELALKAIFSKYPQAQVTIFGAFGGRIDHMMSNLFLPSDPELAPF MRQITLRDEQNTVQFYPAGSNQVLPEKEMIYVSFMADGDADLTIKGAKYELDASNFFKKK IYSSNEFLDQPITVTLKSGYLIVIQSKDR >gi|304425484|gb|AEEM01000019.1| GENE 185 188425 - 189087 937 220 aa, chain - ## HITS:1 COG:SPy0264 KEGG:ns NR:ns ## COG: SPy0264 COG0036 # Protein_GI_number: 15674444 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Streptococcus pyogenes M1 GAS # 1 219 1 219 220 374 87.0 1e-104 MSNNKIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHS KLVFDCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGT PVSAIESVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVAKVAQLRDEKGYDFDIEVDGGVD NETIKACYDAGANVFVAGSYLFKASDLAAQVETLRVALDD >gi|304425484|gb|AEEM01000019.1| GENE 186 189094 - 189966 483 290 aa, chain - ## HITS:1 COG:SPy0263 KEGG:ns NR:ns ## COG: SPy0263 COG1162 # Protein_GI_number: 15674443 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 513 84.0 1e-145 MQGRIIKSLAGFYYVESDGVIYQTRARGNFRKKGQTPYVGDFVEFSADDHSEGYILAIHD RKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEHKAIEPIVYISKMDLVTTPD EIRGIQRQYQEIGYQFCTSLEELLPLLTDKVTVFMGQTGVGKSTLLNKIAPELKLETGEI SDSLGRGRHTTRAVSFYNVNGGKIADTPGFSSLDYEITNAEDLNEAFPELRHLSHYCKFR SCTHTHEPSCAVKEGLESGDLWQSRYDNYLQFLSEIENRRETYKKVIKRK >gi|304425484|gb|AEEM01000019.1| GENE 187 190655 - 190777 91 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILNVLLFVIVRNIVNYVVIPLARLYGTKWIEKHFDDNKK >gi|304425484|gb|AEEM01000019.1| GENE 188 192162 - 192362 289 66 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2017 NR:ns ## KEGG: GALLO_2017 # Name: not_defined # Def: hypothetical immunity protein # Organism: S.gallolyticus # Pathway: not_defined # 1 66 1 66 66 68 57.0 8e-11 MLEVLAGIACLLLAVYQLFTAYKLFDNTKKHGNKNTSPFLLSSLWSGALIGIILISVGTG LIVNIF >gi|304425484|gb|AEEM01000019.1| GENE 189 192494 - 193858 843 454 aa, chain - ## HITS:1 COG:SP0527 KEGG:ns NR:ns ## COG: SP0527 COG2972 # Protein_GI_number: 15900441 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 76 451 67 442 446 211 35.0 3e-54 MDLRSLIAFLETFVTFLGYAILFKSITKYRLAVWEWLVSVLVLPILASGFAVVMLLCFAD MDGFKTVMIKNIVVLLWFTTLSYRHDRSLLPRYHIFYGLFPVAVEDILLRTVSYSLAALF STRINAIGQSWIAHVDIWTPVPIYFMASKLLEIDISNVKKTLQNYLSSTSLILINLLMAF YFFGIDYVALKSPFGSVGSESFRERVTFVYFILLFLFLFYLNYKYVREQEIELQRQQELE LISLENYSKHVESLYQEVRSFRHDYANILLSIGESIERNDLETIKKIYNDITNDSEKLVR NSKFDLTRLSHISNSAIKSLMSAKFLEAENLGITITLEVPEVVECPKIPLITYIRILAIL FDNAIEAAVLSDVPKISVANFYQDDNFVFMIENSTKEDSIPIDNIYQKGYSSKGDNRGIG LATVSEFQQEYDNLSIETSSSNHLFRQILRIYES >gi|304425484|gb|AEEM01000019.1| GENE 190 193871 - 194638 468 255 aa, chain - ## HITS:1 COG:SP0526 KEGG:ns NR:ns ## COG: SP0526 COG3279 # Protein_GI_number: 15900440 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 17 249 3 237 245 181 42.0 1e-45 MFRKQSYCLGEKKMIDIYVLEDDVNQQFRLEKMIDEVLVDNQWQHRCFELFGEPSRLITL IDETVPQIFFLDLDINGDKTKGIEVAKAIRDVSKTATLVFVTTHSEFMLLTYRAQVSALD FIDKTDSDLAIKENLQACLKKVVEGQVPRLSLDTFIFENNKTKIRIPFEDILYFETAEAH RLMLVTRTGQRNFYGTIREVKKANHKLFQCHKSYLINPDNVVSLDKKEGLVYFVGGKSCY VSKKHMKELKTKLES >gi|304425484|gb|AEEM01000019.1| GENE 191 194698 - 194991 237 97 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2009 NR:ns ## KEGG: GALLO_2009 # Name: not_defined # Def: putative bacteriocin immunity protein # Organism: S.gallolyticus # Pathway: not_defined # 1 97 1 97 97 172 100.0 3e-42 MPNLKWFSGGKERRDEALIIIDDLLATLDNNVKINPLRQLLQSYHEELKNSGTSTPYILS RLNVDLSTVLVENAIHPTREQSAKLKELRALQNIRIL >gi|304425484|gb|AEEM01000019.1| GENE 192 195539 - 195850 379 103 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2011 NR:ns ## KEGG: GALLO_2011 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 103 1 103 103 184 100.0 9e-46 MTKLVKEELLNEVYDLVLSVDIKDEERQALLTFKNAVEAGQDFDRAVMSLASDLRRIGVA NIAKKTKMSASVNTFYQKIATYGEFEKNLGRGLMAMGVVGGGH >gi|304425484|gb|AEEM01000019.1| GENE 193 195862 - 196011 197 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKTLFSQYKTAVLVIGIILLLTVYPQIFKIIYMSGRDFGRSLVNALLP >gi|304425484|gb|AEEM01000019.1| GENE 194 196021 - 196320 233 99 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2012 NR:ns ## KEGG: GALLO_2012 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 99 1 99 99 177 100.0 7e-44 MSVASVKQLIKKIVFPTYTHEKIYVIDQTNLTKKLQFSTTLKPLGKWYITTGNHWLCHSE LTLADFQKAFIQQAQVSTDEAQKLEFTTDYLPFSEILGL >gi|304425484|gb|AEEM01000019.1| GENE 195 196498 - 196605 69 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAWTFSIFFVAVYDRKMTFYDLEKAFKNFSATINH >gi|304425484|gb|AEEM01000019.1| GENE 196 196620 - 196757 224 45 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2013 NR:ns ## KEGG: GALLO_2013 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 2 45 1 44 44 74 100.0 1e-12 MMTEKMFKELNQSELEKTIGGKNKDFLIVGPFDWLKKNHKPTKHA >gi|304425484|gb|AEEM01000019.1| GENE 197 196779 - 198086 697 435 aa, chain - ## HITS:1 COG:SP0527 KEGG:ns NR:ns ## COG: SP0527 COG2972 # Protein_GI_number: 15900441 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 59 430 72 442 446 214 34.0 3e-55 MSNYLSELAYYPVIMLIYSNVRGAKLKLWEIVTIAVTFFVIDFTWFYTIIGRILILMLLS YLRDKTLPFSLYVFYGSIPWVIESAFKRIISFFIIPFFNFSYTDLDKNNLLFVIVEFSII LMYFMMVKLFKINFQTFIALSEIKNLRKKLIFTDVTMMFYYVMIEFLTGMEVYGGVPNLV YRQWLVILYFIFFVLMLFYMNRSYQNWLEKEVSLAREQELHSLSVYSKQIEGLYEELRAF RHDYANILASLKEGIEQDDMSMVRNIYNAVLEDSGKFIQHSRFNIGRLTNIDNDAIKSLL SAKFLEAESHHIEVELEVKDKIGAPDIPLLDYVRLVSILCDNAIEAAIEAEKPAMIIACF YQGDDYLLIIDNTTKEERVPVELIYQKNYSSKGFGRGVGLKTVNQMLKKYPNMSVQTSSK NYHFRQTIRIKKSFD >gi|304425484|gb|AEEM01000019.1| GENE 198 198094 - 198825 354 243 aa, chain - ## HITS:1 COG:SPy0245 KEGG:ns NR:ns ## COG: SPy0245 COG3279 # Protein_GI_number: 15674427 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pyogenes M1 GAS # 1 239 1 239 246 218 43.0 7e-57 MLDIYVLEDNIIQQFRMEREIATIMAKNNWDYQRIEVFSSANEIIAKATEKGEHQIFFLD LEIRDDEKQGIDVAKAIREKDATAIIVFVTTHSEFMLLTYQALVGAIDFIDKNLNDQAFS ERIELCLKEAMKHQNDNFGENSFLFETPKARVRMPYSDILYFETSPAVHRVIMHTKNDRM EFYATIAEIAKSDKRLFKCHRSFIINVDNVVRFDKATRSVYFETGDTCLVSRDKIKPLLN EMR >gi|304425484|gb|AEEM01000019.1| GENE 199 198842 - 199168 213 108 aa, chain - ## HITS:1 COG:SP0525 KEGG:ns NR:ns ## COG: SP0525 COG3279 # Protein_GI_number: 15900439 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 1 103 1 105 112 65 34.0 3e-11 MKYFKFTINRRDYKLAIDDILFIQVSKEKIHMVKVVTADEEYHIYHQLKDIEREYHQFFR CHRDTLVNRDKIRIMDREQRLLYVGDEKRPVHYARSKGSQLKEIISND >gi|304425484|gb|AEEM01000019.1| GENE 200 199369 - 199569 234 66 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2017 NR:ns ## KEGG: GALLO_2017 # Name: not_defined # Def: hypothetical immunity protein # Organism: S.gallolyticus # Pathway: not_defined # 1 66 1 66 66 100 100.0 2e-20 MVTKIVGVVCLLIAVFQFYNTYKLFTDTKANGNENTSQFLLASLWSGGLSGIILFIVGLG LLLNVF >gi|304425484|gb|AEEM01000019.1| GENE 201 199707 - 199898 84 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDKVCKNSLYIALIFDFLGICLMLFNYFVYNKDFWNSTTYNLLFGGVFVLLLCKNYFKK DKK >gi|304425484|gb|AEEM01000019.1| GENE 202 199891 - 200904 691 337 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2018 NR:ns ## KEGG: GALLO_2018 # Name: not_defined # Def: cell wall associated protein (LPXTG motif) possibly involved in bacteriocin synthesis # Organism: S.gallolyticus # Pathway: not_defined # 1 337 1 337 337 581 100.0 1e-164 MKKNVLKSIILLSATVLSMATVSVFADDELVPTTETTEVVDNGDNVTKNLATDIIEPSND ISESQSEKTEEESSIETADNSSVIMESTEATETIASDTSDEPEEAEVTIPQYEENVADFN HVPMTDVYVMFTEDGKEHVIYVGRPTCYYCRQFSPALKEFNTLMDNRLEYYNTDSQDFDE EAANFLFGTIGIPGTPTIIRLQNGQIVSAWIGGGISGQELYDYLFYGKIPVAMAAAMAEQ SNEDNTETIAFDAKEIKTDSNIQNVVFLPQNDVKTAERALIVPESPQAFSKNETKTNNSN ALPKLGIKANNFSAYGLLISLLGLILMKLGRGKVANE >gi|304425484|gb|AEEM01000019.1| GENE 203 201157 - 201372 140 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|171779166|ref|ZP_02920137.1| ## NR: gi|171779166|ref|ZP_02920137.1| hypothetical protein STRINF_01012 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 71 1 71 71 86 97.0 5e-16 MYYSIFVILFCIILAIIFIDGFFIKKNNKASSYIIFLTCYVLSQKEANTSFLTIICLFIL LLIYYENRDKK >gi|304425484|gb|AEEM01000019.1| GENE 204 201962 - 202159 391 65 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2020 NR:ns ## KEGG: GALLO_2020 # Name: not_defined # Def: putative bacteriocin # Organism: S.gallolyticus # Pathway: not_defined # 1 65 1 65 65 92 100.0 4e-18 MSLNKFTNFQELDKNHLQTISGGKGNMGSAIGGCIGGVLLAAATGPITGGGAAMICVASG ISAYL >gi|304425484|gb|AEEM01000019.1| GENE 205 202178 - 202429 361 83 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2021 NR:ns ## KEGG: GALLO_2021 # Name: not_defined # Def: putative bacteriocin # Organism: S.gallolyticus # Pathway: not_defined # 1 83 1 83 83 94 100.0 9e-19 MNTKTFEQFDVMTDEALSKVEGGYSKTDCLNAMITGIAGGIVAGGTGAGLVTLGVAGLPG AFVGAHIGAIGGGATCVGGMLFN >gi|304425484|gb|AEEM01000019.1| GENE 206 202676 - 202933 114 85 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2022 NR:ns ## KEGG: GALLO_2022 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 85 1 85 85 101 100.0 8e-21 MLTRFFTISSRTLAFLEKLKTVFDSWLAPLALLLLGITYFFIEINRQVAIVLSIISLFLI FTYLILGAYLFIRIRFFLWKNGKEK >gi|304425484|gb|AEEM01000019.1| GENE 207 203040 - 205187 227 715 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 484 706 132 355 398 92 31 2e-17 MRRYKYVSQIDLRDCGVAALASVAKHYGSDFSLAHLRELAKTTKEGTTALGIVEAAKAIG FETRAIQANMELFDMADIPYPFIVHVNKEGKLPHYYVIYKAKKDYLIIGDPDSSVGVTKM SKAHFAKEWTGVAIFLAPAPHYQPHKDKKNGLTSFLPIIFKQKALLTYIILASLLVTLIN IVGSYYLQGILDDYIPNHLQSTLGIVSVGLIVTYIMQQIMSFSQNYLLVVLSQRLTIDVI LSYIRHIFELPMSFFATRRTGEVISRFTDANSIIDALASTILSLFLDVSILFIVGSVLIL QNANLFFITLIALPIYAIIILAFMKPFERMNHDVMQANSMVSSAIIEDINGIETIKSLTS EEVRYQNIDREFVDYLDKSFTLSKYEAVQTSLKQGAQLILNVVILWYGSHLVMAGNISVG QLITYNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVSSEFDGKQLLNDSHFLQG DIVFDNVSYKYGFGRDTLSHVNLHIKKGEKISLVGISGSGKTTLAKMIVNFYTPNHGQIT LGGYDLKTIDKKAIRQYINYLPQQSYVFSGKILENLTLGAPDNITQEEILKACEIAEIRA DIESMPLAYHTELSDGAGLSGGQKQRLALARALLTQAPVLILDEATSGLDVLTEKRVIKN LLSLTDKTIIFVAHRLSIAEQSDRVIVLDKGQVIEEGHHKQLIQNQGFYAQLFHE >gi|304425484|gb|AEEM01000019.1| GENE 208 205199 - 206593 1221 464 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2024 NR:ns ## KEGG: GALLO_2024 # Name: not_defined # Def: putative accessory factor for bacteriocin ABC-transporter # Organism: S.gallolyticus # Pathway: not_defined # 1 464 1 464 464 663 99.0 0 MNPKLFQSAEFYHRRYHNFATVLVIPMTLLVFFLLAFSLIGKKEITVTTLGSIRPTKVIA VVQSSSNNTVLTNNLSENKAVKKGDLLIQYSDKLEDSQLNAIQTQIKRYERQQEALNQLK ESLKQGQNLFTGDDEFGYSATVERFLNQSQTITAQVSQSNQSVAKQEAGVNQANAAIANQ IANLQTQASQYQEVKDAIQTDKTNVSGNNPYATTLNSYLSQIQTINTQSSSTDNNSASKE SVKNQFLTDLQGQIDSINASISSLQTQAASNYSTGSYDTSATNQIESLRQQELTQAETQL AQITQEKENLQAQLDQTNLSKADTVLKASQSGILHVSDEFEGQTLLPQGSQIAEIYPDIA KTQQVAIRYYVDSTHVSQLKKGQTVRLTLEKISNHAIVITGKISKIASSATQTKEGNVFE VTALATVDKQDSSKLKYGLQGKTISTIGKKTFFNYYKDKLLKDF >gi|304425484|gb|AEEM01000019.1| GENE 209 206872 - 207459 209 195 aa, chain + ## HITS:1 COG:SP0143 KEGG:ns NR:ns ## COG: SP0143 COG1266 # Protein_GI_number: 15900081 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 99 183 131 215 225 68 44.0 8e-12 MFTILERLDLPLTDYHYPVLNIFTIIFTIVLVIYLRRRRPEIFQITSLKPLDYLLILLAF GVIYTYFNKLLFVGGDIKNDLLFFRHSPQAFLVALQPFIIGPILEELVYRGALMTSFFEK SKFYLDCLLSAVMFSVAHLFSYGVSLEVFKNYAFLGLILAILFRKTRSIYPSILVHMAWN IYIGWHLIAFVFFAQ >gi|304425484|gb|AEEM01000019.1| GENE 210 207665 - 208336 289 223 aa, chain + ## HITS:1 COG:SP0925 KEGG:ns NR:ns ## COG: SP0925 COG1266 # Protein_GI_number: 15900805 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 8 212 7 208 223 70 31.0 4e-12 MSNQYQQKLLLASPLLFYVTFFRSFPCLLGKIVTKYAINDFDGTILLCAYYTLVSLLLVG YLLKQNGRAFFKVKFHSHYVGVIVLLALANLALSAALLCYLPISLNQELLNESRIISAEN VLLVRFFGGGIVALINEELFYRGVLMSTYFKHSRYHLDILVSAICFASVHVIWSSWSWFD FIQYIPAGLSLGLIFKWTKSIYYPILLHFLVNYGPKTIFMILT >gi|304425484|gb|AEEM01000019.1| GENE 211 208370 - 209242 952 290 aa, chain - ## HITS:1 COG:SPy0262 KEGG:ns NR:ns ## COG: SPy0262 COG0030 # Protein_GI_number: 15674442 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 506 88.0 1e-143 MRIADYSVTRAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGAL TEFLAENAAEVMAFEIDDRLIPILADTLRDFDNVKVINEDILKSDLQSRIKEFANPDLPI KVVANLPYYITTPILMHLIESKIPFAEFVVMMQKEVADRISAEPNTKAYGSLSIAVQYYM TAKVAFVVPRTVFVPAPNVDSAILKMTRREQPLVQVKDEDFFFRVSKISFVHRRKTLWNN LTSHFGKADETKAKLEQALEIAEIKPSIRGEALSIAEFAKLADALKEVGL >gi|304425484|gb|AEEM01000019.1| GENE 212 209312 - 209836 311 174 aa, chain - ## HITS:1 COG:mlr0163 KEGG:ns NR:ns ## COG: mlr0163 COG3797 # Protein_GI_number: 13470453 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 4 174 7 177 184 73 30.0 2e-13 MKKVALLRGVTPVGQNRIPKMAYLAEILTEAGLENVKTYIQSGNIVFETTLSDDDVCALI HDTIQAKIGADLSVILKTQAQFTTALAESPFDESYDDSRVHLVFTNDQLNQEILNELLET DFGAEILKAGSECLYLYLPREAKKKRLNTNYLEKQLHITATMRKRRSILRLSQM >gi|304425484|gb|AEEM01000019.1| GENE 213 209833 - 210402 788 189 aa, chain - ## HITS:1 COG:SPy0261 KEGG:ns NR:ns ## COG: SPy0261 COG1658 # Protein_GI_number: 15674441 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Streptococcus pyogenes M1 GAS # 1 189 1 189 189 280 79.0 1e-75 MTEKIKIQEVLVVEGKDDTANLRRFYDVDTYETRGSAINDDDLERIEKLNDLRGVIVFTD PDYNGERIRKIIMNAIPNVKHAFLNRDEAAPKSKSKGRSLGVEHASFEDLQKALSGVLGN FDDDNQFDITRADLMRMGLLMGNDSRRRREYLGEKLRIGYSNGKQLLKRLELFGITLAEV EEAMERYEE >gi|304425484|gb|AEEM01000019.1| GENE 214 210395 - 211174 807 259 aa, chain - ## HITS:1 COG:SPy0260 KEGG:ns NR:ns ## COG: SPy0260 COG0084 # Protein_GI_number: 15674440 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Streptococcus pyogenes M1 GAS # 1 259 16 274 274 417 77.0 1e-116 MEKFDIFDTHTHLNADDFAGREAEELALAKEMGVTRHNVVGFDAPTIKRAIELAEKSPEI YATIGWHPTEAGSYNQEIEDMIVANLSHPKVIGLGEIGLDYHWMEDPKDVQMEVFKRQIQ LSKDHNLPFIVHTRDALEDTYAVIKEAGVGPRGGIIHSFSGSLEMAERFIELGMMISFSG VVTFKKALDVQEAAQRLPLDKILVETDAPYLAPVPKRGRENRTAYTRYVVDKIAELRGLT SEEVAKATSDNAKRLFNCD >gi|304425484|gb|AEEM01000019.1| GENE 215 211311 - 213647 2743 778 aa, chain - ## HITS:1 COG:L83620 KEGG:ns NR:ns ## COG: L83620 COG4932 # Protein_GI_number: 15672666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Lactococcus lactis # 388 487 232 332 336 70 41.0 1e-11 MKKLFTILFVLLSVLCFLGGEKGVLAESNSLETFRGYVNNDGKSSESRLGINNIYIDDNS QTIVGYCFNIKKQYPSMYGDRYTKYTNVTAEQMKENSSSTLEDAVLYDSVMKVLYNGYPN NGSSIQQKYQLTDDQFRGITQLVIWKFTDSYTGYSFSSDNLENAYNELSNVSQLTYPSNF KLNLYLSTNPYVQNLMAVEMLPENQTEYTSVSVNKVWDDANNQDGQRSSEVTVQLLANGV EVSGQQLVLSDANGWNGTFENLDKYDSDNVLIDYTVKEVTDLSGYQSVVSGSDNNYTITN THVPEVINLSGTKTWDDNNNQDGIRPESIVVHLLANGVDTGQTKEVSQTDNWTYQFENLP KYQNGQEIVYTVSEDSVGGYETIISGFNITNSHTPETTEVSGTKTWNDNDDQDGKRPDSI TVNLLANGTKVASQEVTADTNWTYTFSNLAKYANGSAITYTVTEDSVDNYTTTINGYDIT NSYTPGKTSLTVTKIWDDSDDQDGLRPNSIDVQLYANGKKSGDVVTLTAADNWTYTWTNL AEKANKKDIVYSVKEVTEVDGYTTTEGKVENGNVTITNTHVPVIPEEPEDPKTTDVTFSK VEVNGSAELPGASLKVVSGETADGQIATDAKTGENLAWTSGDTAKVFSLSEGTYTMVESQ APAGYELAESITFRVTADGQVEVKGTDGSWTVQADATIKMEDAKTPVIPEKPQSNTPTVD DPTTPSSNSDKQSEKKQEKKSLLPSTGDSSGLGLMMIGPALVLSVIFGFVYKAKRAKA >gi|304425484|gb|AEEM01000019.1| GENE 216 214119 - 215087 1044 322 aa, chain + ## HITS:1 COG:SP1220 KEGG:ns NR:ns ## COG: SP1220 COG0039 # Protein_GI_number: 15901082 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 318 1 317 328 506 79.0 1e-143 MTTRKQHKKVIIVGDGAVGSAYAFSLVNQGIAQELGIIEIPQLFDKAVGDAEDLSNALAF TSPKKIYAAQYSNCSDADLVVITAGAPQKPGETRLDLVDKNLAINKSIVTEIINSGFNGI FLVAANPVDILTYSTWKFSGFPKERVIGSGTSLDTARFRQALGEKIGVDARSVHAYIMGE HGDSEFAVWSHANVAGVNLEYYLQEVNDFDAEEVFQIFENVRDAAYSIIDKKGATFYGIA VALARITKAILDDENAILPISVYQGGQYPDVSDCYIGQPAVIGANGVVRPINIPLNDSEL QKLQASATELSSIINEAFSKLQ >gi|304425484|gb|AEEM01000019.1| GENE 217 215855 - 216454 269 199 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2035 NR:ns ## KEGG: GALLO_2035 # Name: not_defined # Def: hypothetical protease # Organism: S.gallolyticus # Pathway: not_defined # 1 199 90 288 288 291 98.0 7e-78 MTTNIFSVILEAGFKVFNLSAKPTLAVSKTTFAEYLYICVIGPIIEELIYRGTLMTQLKK YGIHFAILFSAFYFGLIHHDLYQGISAGLGGIIFGYVAYRYSLLYSIILHITSNTFATIT STIKSNDTLSNLLVITIILIALITTLVVGIKYLKNRSSSHLLPQKTSSEHMIAMKKLLAT SLCILDLVILIHSSFHLLS >gi|304425484|gb|AEEM01000019.1| GENE 218 216883 - 218679 1761 598 aa, chain - ## HITS:1 COG:L96595 KEGG:ns NR:ns ## COG: L96595 COG2217 # Protein_GI_number: 15672077 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 1 594 1 590 593 575 52.0 1e-164 MSNFKKLLAIITIALLALIINFVFHKPDLAYILVVIFCGIISLSMLIDMIKTLKSGQYGV DILAISAIIVTLLVGDYWASLMILIMLTGGESLEDYASKQASRELRSLLDNSPKIAHRLV GHELEDVPVEALKIDDVVVVRPDEMVPVDGRILSGESDFNEASLTGEAKPIEKKVGDNIL SGSMNGSNSIQFEVTSLAEDSQYQQLVRLVKESTSNPAPFVRLADRYSIPFTVIAYLIGG FAWFISKDPVRFAQVLVVASPCPLILAAPVALVAGMSQASKNGIIIRTGTTLEKLSGAKS VAFDKTGTITQGNLAVNQIIAVEGTTEEELIQLAASLEQNSSHILARSLVQYAKSKGITF LPVTSATEVTAQGIIGKISGNEVSAGKPSLIKNFSSENLSKETSIYVGKNDHLLGYITFK DSVRPEAKETMQKLQQMDVENLVMLTGDKDSVAKEIAEQVGINKVFADCLPQDKIKHLKD IEIQDGPVLMVGDGVNDAPALVTADVGIAMGAHGSTAASENADVVIMKDDLSKVVQVITI AKHTMKIAKQSVLIGLFVCLALMVIAATGVIPTLLGAMLQEVVDTVSILSALRARKNV >gi|304425484|gb|AEEM01000019.1| GENE 219 218864 - 219076 85 70 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 5 69 262 326 422 77 64.0 5e-15 MGVKKSLEYRVLKYYWKLIQKDSRKLSPNAFYSRTFRETLISKKYLKRFFKHVPQLKNYY NLYPLSEIHH >gi|304425484|gb|AEEM01000019.1| GENE 220 219076 - 219243 60 55 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 3 54 370 421 422 80 78.0 8e-16 MLLPYSNVKPEATNKLIKDIKRNTFGYRNFDNFKKRIYLALNIKKARTSFVLARV >gi|304425484|gb|AEEM01000019.1| GENE 221 219298 - 220236 770 312 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 21 287 1 272 279 186 36.0 3e-47 MIWLKQKLSKFALPFIFIMGLGLLTYPTISDYWNSFHQSEAIMSYTKSVSKMSTEDYKRI LASAKQYNATHGMDWNFSDEDKAAYEKELNFNNDGSMGYIDIPKINVKLTIFHGTDESVL QTSIGHLEGTSLPVGGKGTHSVLSGHRGLPSAKLFSDLDQLREGDTFTIHVLNETLTYEV DQIRVVEPTDLSNLTIDPDQDYVTLVTCTPYGINTHRLLVRGHRIANSDGDANVISDAVQ IKPIYIAPFLATPICVVLLMYIFIITSKHYRKKHANRVANYLAQKEINYRPQVDRNVYKG IIEQLKKFFEDS >gi|304425484|gb|AEEM01000019.1| GENE 222 220381 - 221817 1685 478 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2039 NR:ns ## KEGG: GALLO_2039 # Name: not_defined # Def: cell wall anchored protein (LPXTG motif) # Organism: S.gallolyticus # Pathway: not_defined # 1 478 1 478 478 746 99.0 0 MNKLKKILTPLLTVLALVFVCGAVSAQTVDSGAGGSATITINNASQGQTYTVYKLFDATV DGNGAISYKLPSGKTSLGDGSTWFEVDAKGNVTAKENADVSSDAFKTWAASFGTQAATAT AEDNTVTFTNLAYGYYYVQSSLGATITVDSTNPDATIKDKNTTAPNIPDDNNGGGKHILV NGEIVDSTTAKVGDTVNYQIKFEATNYVTTETDSKQITKYTIIDTPTNLSIDQSSVKVLV KGTEAKAANVSTTFDDAGKMTIVLTWADESGKTIYDSPADVVITYNATVTKGAADAAATN SATIGYNTADNPNEDPTPVDPDKPTDTTEVKTYQFTLNKVDTSSNQLTGATFKLYDAATD GNEIKVVKVSDGVYRVAEASEEGTEIEAGSAIIKGLKGDDTKYYLEETKAPNGYNILTER KEVTISSTETNTSNVINKSGAELPSTGSFGTKVFYLVGSILLIGALIFMISKRRMNNM >gi|304425484|gb|AEEM01000019.1| GENE 223 221908 - 226905 4462 1665 aa, chain - ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 868 1033 394 547 656 68 28.0 9e-11 MKKFFRREYLAQFKAKYKKVIGAIAVIVVFVTTYALILPALTLDSNAANQTPGINTEQSG SVDDNTTSTSLSTENSDSQAVSETNVSSQDEQLVTTDTTLIADDKNYQVTADITAEAKLP ESVALEVNQVKPEDDTYQSKLQKIQDTLSLNTVANIRLYDIAFMQGDAEVEPSASVKVTI TQKDSFEANKDNLKVVHIKTDGSTEVLDAEVAGDGNQVTTVTFNSDSFSDFALVDTSTSD DSILNSNGSSTGTDVDASVESTTETETTSQSYTVTFYNDDSEITSTQIEAGTALTILPET PFKSGYRFDHWENAETHETVTADTIVTSDLTVKAVFTEISIYTVTVNYYYHNNSANQDVT FDKEIFQLEERDTPYQITPPTSTEVKREEDSTLTADAIYYPQEAVIELKSGDLAIKDELD GNIDGKVTINLQYVPYTAEYTVHYMLKNLTGDDYTEIQSVINHGVLGSTVSPQVLSYDYA IFEKTEATKLTQSQGQNLYVYYTRNSYTLSYNTNGGSHIPYQTGLYESKVSLTDNVPTKT GYTFVGWHEKEDLSDTAKTSGTITLDSDKTLYAEWKANTVNYTINYYKEVYNNATGTTSY VYDSAVSASGKVGTTVQADEAPALTTVPTGYERESAYGMNANSNVTIAADGTSVLKVYYS LVRYTFVFNLNGPYYYTNGFSTGRISKNGSDYYNSNYTIQNVVLGQDISSQWPSGDDVTD TYNYYSFVGWSSNTTTVLFVTRRHEVTEDMILGADSSNRKTYTANWQTGLITKQVDYYLQ SANDPNVYELSSKYSQFYNSQANTMLNPKNIAGFTITETPSGYSNSTGYYYGSTYVVDHY RFYYTRNTYSIDYYNGSNINTISSIPFEQNINSSTYNYTPERPSGIDADYTWGGWYTDAG LTVPYTFDTMPSHNLVLYAKWVAPTFNVTFDLNGGDGVAPTTQEVEKYKTATSVADPSRQ YYNFDGWYTAKEGGERYDWSQPVTSDTKLYAHWSLKPLTYTVRYLDADNNNNQLAADKTV TSPALNYQQVVSESALAITGYRPDVNSKSVVLDYAADNNIITFYYTKKSAQVSYRVDYVL QDNPTVKVAESKSVTVDGSTISVKESAVTVDKDYLAKQLDMTPEQLDDYYALTDVESLTL TSSSDNNVITFYYVPYDTAHITVNYLDMDGNPIVGQEPLNTTRKKPSQYTVTHKTISGYT YAQSEDSNGDKNKVNYKIDKGDNITINLYYQKDLYIEAVSKEKNYDGIALENSGLTDLKD SYKDLLETDDSLTGISFTGSQIDAGSSAVTPSIALVSSSTGKARNYYYNIIYVAGTLTVN KQPVTVIVNGQDKEKTYDGVAESISYDDLVINDSSGLYKESDIRFTGDKTLSATDAGTYN LTLQGKFTNSNANFEVTFQVSDGRLLIKPRPVILTSETAEKGYDGMALTAQTVTASEPTA DTGFVTGEGLLYDVTGSQTATGSSDNTFTYAAMNTATKLSNYDIATVYGRLTVTPTVNIQ KTKTNWTALTGGKFEISKWNGNTWTSIDGVSDLIITSTDGVTIPVGLNTGCYRITETAAP DGYVILDNSVYFAVTESQAENGQSSFAISLTDENGNTISNLENVKVLEGNSSYSTRIQIA NETGKALPHTGGSGRMFYMLVGLALMLVTLAYRQYQKHRERSDLP >gi|304425484|gb|AEEM01000019.1| GENE 224 226946 - 227539 566 197 aa, chain - ## HITS:1 COG:CAC2646 KEGG:ns NR:ns ## COG: CAC2646 COG0681 # Protein_GI_number: 15895904 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Clostridium acetobutylicum # 23 193 3 181 184 89 33.0 3e-18 MKKNKSTKPHPLPETTVIEQAYKSAQHRKNFLEMFRSTTFMLIVVAAFAVLVAILFLPIL RIYGKSMKGTLNSGDIVVSVKSGNFETGDVVAFYYNNNILVKRVIAESGDWVDMDEKGNV YVNGKKLNEPYLSKKAYGKTNITFPYQVPEDRIFVMGDNREVSIDSRNTSIGAVSDEQIV GRLVFKVWPLSEMGIIE >gi|304425484|gb|AEEM01000019.1| GENE 225 227526 - 227783 373 85 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2042 NR:ns ## KEGG: GALLO_2042 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 85 1 85 85 90 100.0 2e-17 MNERTLKQLKKIELYEILLAQSKEIDRLKQELIETQQKLENKQIIIQEAGSLADAALKLT KIFEEAQKAADIYLKNITENDDEEK >gi|304425484|gb|AEEM01000019.1| GENE 226 228494 - 229147 407 217 aa, chain - ## HITS:1 COG:AF0512 KEGG:ns NR:ns ## COG: AF0512 COG0500 # Protein_GI_number: 11498123 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Archaeoglobus fulgidus # 26 155 17 142 205 61 26.0 1e-09 MADKIKKAYRASKGIYDDVLTQRSLFSKLYIKLFWSGVDDNKIARVILDYIPEDFSGVLL DVPVGTAVFTQEKWKRLLNANIICLDYSEDMILQAKKRLENYSHILCMQGDVGELPLENS SCDIVLSMNGFHAFPNKNQAFQEIWRVVKPGGKFIACFYIKGKSKITDWLVKNILSKEGW FTPPFQTEKQLKDLLENLYSKINLHTEGSMVYFECIK >gi|304425484|gb|AEEM01000019.1| GENE 227 229387 - 230958 1112 523 aa, chain + ## HITS:1 COG:L162870 KEGG:ns NR:ns ## COG: L162870 COG1132 # Protein_GI_number: 15673504 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Lactococcus lactis # 3 523 1 524 529 391 39.0 1e-108 MPMLTYLWKFKKENLLLLAIIIFWVISNVMSSLSLTWMLDSLIKSKWDSFVFWSVIDILC WGGYSIFQIWKDSLKEKLCQEEVNLIRNDLLDSLISHSYAGNSHHSKDEYNSWLINDMNL LKDNGFNQLYSAIESIITVLFNAFAIIYFHWLLLAVSILMTALVYFLPKIFENNIAQETE AVSSDLTVALNRTSDYLSGFNIFFHNNQTAYFKNRILADFSTVVKSKVKLARSSSTANSL SLMSSVVAQVIIFMVTGYLVIKGEVTTGVIFSIANLTSCLFNYTRGAAYNIVTFKATFKL LEKYPKKVSIENLDTVTNFNQELVIHDLCVTFENGNSITYPNITIKKGEKVAIVGGSGAG KSTLIRVLTGELTCYDGDIVIDNHHYKDTLLESLQTIFALIPQKPHIFKESLLDNLTLGR SVDKEQFEKALSLSHVDNFIEGRLNQIYNDDLSGGQRARISIARELIGNKPILIMDEGVS NLDKTTAINIERCLLQTKELTVIMITHHLYDENRALFDQIIEI >gi|304425484|gb|AEEM01000019.1| GENE 228 231408 - 232226 619 272 aa, chain - ## HITS:1 COG:SPy0456 KEGG:ns NR:ns ## COG: SPy0456 COG1108 # Protein_GI_number: 15674575 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 1 272 3 274 284 323 80.0 2e-88 MEFINDLMTYHFLQNALITAVVIGIVSGAIGCFIILRSMSLMGDAISHAVLPGVAISFIL GINFFIGAVIFGILASFIITFIKENSVIKGDTAIGITFSSFLALGVILIGVANSSTDLFH ILFGNLLAVQDSDKWVTIVISGIVIGFLIIFFKELLVTSFDPILAESMGMDVKFFHYLLM VLLTLVSVTAMQSVGTILIVAMLITPAATAYLYVNSLKVMVLLSSGIGAITSIVGLFLGY TFNIAVGSSIVLTSAFIFLVSFFISPKQSFMK >gi|304425484|gb|AEEM01000019.1| GENE 229 232237 - 232950 243 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 2 209 12 218 318 98 30 3e-19 MIEIQGLNVIYNNDYQALANVSITLEEGNIIGVIGPNGAGKSTFMKALLGLVSCTGMITI SHERVNSLRGKVAYVEQKSHVDYHFPITVKECVSLGTYQRVGLFRHLSKKEWGKVENVLR QVKLEEFSNHPISTLSGGQFQRMLIARCLIQEQDILFLDEPFVGIDLVSEQIIMNLLQSL RREGKTIVIVHHDLSKVVDYFDKVVILNKKLVGYGNVATAFTPDALKKAYGDSIVVL >gi|304425484|gb|AEEM01000019.1| GENE 230 232993 - 233919 846 308 aa, chain - ## HITS:1 COG:SP1650 KEGG:ns NR:ns ## COG: SP1650 COG0803 # Protein_GI_number: 15901485 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pneumoniae TIGR4 # 1 308 1 309 309 440 74.0 1e-123 MKKITSLICLLLIICILGACATTRTSEKNKLNVVVTNSILSDITQNIGKDKINLHSIVPI GQDPHEYEPLPEDVKKTTNSDIIFYNGINLETGGNAWFTKLVKNAHKEANKDYFAVSDGI DVIYLEGKNDLGKEDPHAWLNLENGIIYAKNIAKQLIAKDPKNKEFYTKNLTSYINKLDK LDQEAKQKFSKIPENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPEQTTSLVRK LKEGPTPSALFVESSVDDRPMKTISKETGISIYSKIFTDSIANKGEEGDSYYSMMKWNLD KIAEGLSQ >gi|304425484|gb|AEEM01000019.1| GENE 231 234176 - 234538 425 120 aa, chain - ## HITS:1 COG:L123159 KEGG:ns NR:ns ## COG: L123159 COG3493 # Protein_GI_number: 15672883 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Lactococcus lactis # 1 120 306 425 425 164 80.0 3e-41 MFNRVIMTNLTHAVLAGIGLSMIDLSSLAQAMTWQFVLISLTSVVSMGLASWILGQVLGM YPVETAIGAGMINNSMGGTGNIAVLSAADRMEMIAFAQMANRLGGAIVLILGGILIQFLH >gi|304425484|gb|AEEM01000019.1| GENE 232 234548 - 235447 956 299 aa, chain - ## HITS:1 COG:L123159 KEGG:ns NR:ns ## COG: L123159 COG3493 # Protein_GI_number: 15672883 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Lactococcus lactis # 1 299 1 301 425 292 60.0 6e-79 MKKLSNIKIAGLSLPLYTALVIILAVVIAMGKLPLNMVGITFMLVVLGHLFYFLGERLPF WNTYLGGGSVFTLLLAAILASTGLIPKSVVSATSSFMSDWGFLDFYIAALICGSILGMNR KLLVKASAKFIPVALLSMVIGFFATGAVGALLGQGFGHSVMYISFAQMAGGMGAGIVPLS KIYAAGLHTDASSILSQLAPATTLGNIFAIIGAIVLARGFANTKFNGHGVLIPVDKDDLK KSEAPLDPTKIGVGMMLAFALFLIGVILNAFIPKVHSYAFMIIIVFVLKALDLVPKPLE >gi|304425484|gb|AEEM01000019.1| GENE 233 235469 - 237091 2416 540 aa, chain - ## HITS:1 COG:L121483 KEGG:ns NR:ns ## COG: L121483 COG0281 # Protein_GI_number: 15672882 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Lactococcus lactis # 1 540 1 540 540 946 85.0 0 MRGHDILNNPFLNKGTAFTMEERKELGLLGILPPYVQTIEEQAEQAYQHFLRKPSNLEKR HFLMEIFNTNRTLFYYLFNQHIVEFNPIVYDPVIAETIEEYSELYVDPQYAAYLDINHPE NIEETLKNAAGDRDIRLIVVTDAEGILGIGDWGVQGVDISVGKLMIYTAAAGIDPASVMP LVIDAGTNRKELLENPMYLGNRHERVTGDKYYEFIDKFVQTAENMFPKLYLHWEDFGRSN AANILNKYKKEIPTFNDDIQGTGIVVLGGIFGAMDITGEKLTDQVYLCYGGGSAGAGIAD RVHAEMVSEGLSSEEAYKHFFMIDKQGLLFDDMEDLTPAQKPFAKKREDFANCGDMTKLL DVIKAVKPTILVGTSTDAGAFTKEVVEAMCENTERPVIFPISNPTKKLEATAQQVIEWSD GKAFVATGVPSGTVSYKGVDYQIGQANNALIYPGLGLGMLASEASLLTDEMIGAAAHSLS GLVDPGQPGAPVLPPFQYVAEVSIKVAEAVAKKAQEQGLAQAEEKDMAKAVRDLKWYPKY >gi|304425484|gb|AEEM01000019.1| GENE 234 237248 - 238129 573 293 aa, chain + ## HITS:1 COG:L0148 KEGG:ns NR:ns ## COG: L0148 COG0583 # Protein_GI_number: 15672854 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 292 3 290 291 246 45.0 4e-65 MNLRDLEYFYQLAKLKSYTAAAQYFQVSQPTITYAIKRLEKELGCDLVIKDPSHRSAALT LQGDIFQSHVEDVLLQIKTAVNEVHQSLNPMMAVGLPPIICNYLLTELLHKNESIAPFSQ VKAVRGGSNSLMMKLLDGQLDFSLLGSLAPLKNDQLIIHPLFKKDFYVVLSPKHPLANQK ELSFQDILYEKFILLDEHNIHLTAFNQLNHRYHDQASILFKIDDVSVIKQMVAENMGISL LSDIALTSGSDQLVKVPLAEQDRISFYVSYAHSRHAILSKEAKDLVRLIEKIS >gi|304425484|gb|AEEM01000019.1| GENE 235 238211 - 239614 1339 467 aa, chain - ## HITS:1 COG:SMb20552 KEGG:ns NR:ns ## COG: SMb20552 COG4099 # Protein_GI_number: 16264279 # Func_class: R General function prediction only # Function: Predicted peptidase # Organism: Sinorhizobium meliloti # 158 408 17 233 243 65 25.0 2e-10 MRKVLQSILVTFLGLGLLLSAQKVEAVDANRQSNVAVTNTSIVINNYEFGPGVDKIVLQT NASLRNVDASSATVTTAGITRQVTNAYLSDANGNAVKSRGGRNTSQYITLELSVSYNNDA PAQSASPFSFDLSTYRNTWVSSYVVKVEGLNVTPLYGYNSTQLNAEQEAINNKITPSANR FTERGSYSLSYAAYQPESAAGGEKNPLIVWLHGIGEAGTDINFPLLANEVNLLTEDTIQN HFTSTGTGSQRGAYVLVPQSPTAWGQNQAELMDTINQYIAAHPDIDSSRVYLIGGSNGAA MSVQMGLTYPNTFAALVPIAAPLSYQMTIADSGEEIYSLDESTLTALKDQPMWFITARSD ASVPVDTNTLPYYKALLNGGATNKWLTYYESVVGTELAQEYNGHWSWIYLFHDQATGVQN TTNVVTWSGLTGMVATNPTNGGDAQAQVNGVSYNNIFDWLNAQYATN >gi|304425484|gb|AEEM01000019.1| GENE 236 239772 - 239951 140 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKEIGTYVRIADLLLAVLLILDRGVKSTLVIAIVVFISSVIVQIMLSYKRLKIANNYN >gi|304425484|gb|AEEM01000019.1| GENE 237 240111 - 241385 1192 424 aa, chain - ## HITS:1 COG:SP2173 KEGG:ns NR:ns ## COG: SP2173 COG3966 # Protein_GI_number: 15901983 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) # Organism: Streptococcus pneumoniae TIGR4 # 8 420 2 415 416 431 53.0 1e-120 MLKRLWQILGPVVCAVLIVLLVFICVPTANQKHDLKAEKKDAVSLSKTSFKSKYKKVRAL TDAKHRFVPFFGSSEWLRFDKMHPSVLAEKYHRNYTPYLLGQRGSASLTHYFGIQQINKE LKNKQAVYVISPQWFTSKGASASAFQEYFSSGQAIDFLKHQKGSVYDRYAAKRFLKMYPD SSFKDMMENVAAGKSLTASDNENLNTQQMIFQKEDALFSQIPMFDNYDSKIKPQAKKLPA CFSYSKLGGIAIADGKKRSSNNTFDIDNTFFDTRLKAQLKRLKQSQTKFNYLNSPEYNDL QLVLSQFAQDNTNVLFVIPPVNSKWANYTGLNQAMYQKTVAKIKYQLQSQGFTNIADFSK DGDKPFFMQDTIHMGWTGWLAMDKAVNPFLSQKQATPSYHLNDQFLTKAWASYDGSVQQF NAKS >gi|304425484|gb|AEEM01000019.1| GENE 238 241378 - 241617 425 79 aa, chain - ## HITS:1 COG:SP2174 KEGG:ns NR:ns ## COG: SP2174 COG0236 # Protein_GI_number: 15901984 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Streptococcus pneumoniae TIGR4 # 1 79 1 79 79 100 78.0 9e-22 MDIKTDVLAIIDDLFMEDVSDMMDEDLFDVGVLDSMGTVELIVELESHFDIDIPISEFGR NDWNTANKIIAGIEELCHA >gi|304425484|gb|AEEM01000019.1| GENE 239 241648 - 242910 950 420 aa, chain - ## HITS:1 COG:SP2175 KEGG:ns NR:ns ## COG: SP2175 COG1696 # Protein_GI_number: 15901985 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Streptococcus pneumoniae TIGR4 # 3 416 2 413 413 546 70.0 1e-155 MSEFLQQLPHLEAYGNPQYFLYLIVAVLPIFIGLFFKKRFPLYEALVSLAFIILMLTGKT ANQLVSLLAYVVWQVILVFSYKIYRKRHNHKWIFYLWVFLSILPLAWTKLTPLMTIDNHQ SLFGFLGISYLTFRAVGMIMEMRDGVLSEFTMWKFLRFLLFMPTFSSGPIDRFKRFNEDY ENIPEKAELLNMLEESVHYLMLGFLYKFILAYVFGSLLLPQLKECALQMGGVFNIATLGV MYAYGFDLFFDFAGYSMFALAISNLMGIKSPVNFNQPFKSRDLKEFWNRWHMSLSFWFRD FVFMRLVKVLVKHKVFKNRNVTSSVAYIVNMLIMGFWHGLTWYYITYGLFHGIGLVINDA WVRKKKKINRGRKAQDLPPLPDNKWTQALGIFITFNVVMLSFLLFSGFLDQLWFPKTAGK >gi|304425484|gb|AEEM01000019.1| GENE 240 242907 - 244445 1272 512 aa, chain - ## HITS:1 COG:SP2176 KEGG:ns NR:ns ## COG: SP2176 COG1020 # Protein_GI_number: 15901986 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 4 512 8 516 516 828 78.0 0 MLHDMIERIEHFAQVQADFPVYNILGDVHTYGDLKADSDALATYIDFLKIEEKSPVLVFG GQEYEMLASFVGLTKSGHAYIPVDQHSALERIEAILAIAEPSLIIAVGDFPLEITHIPII KSAELKTIFAQKSDYHLTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEAE AFSVPRRPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPKELTTDFQRLFTTINQLPIGV WTSTPSFVDMAMLSNDFNHETLPNLMHFYFDGEELTVKTAQKLRSRFPKARIVNAYGPTE ATVALSAVAITDEMLATCKRLPIGYTKADSPTFVIDENGNPLPNGEQGEIIVSGPAVSKG YLNNPERTQAAFFEFNGLPAYHTGDLGIMTDHGMLLYGGRMDFQIKFNGYRIELEEVSQN LNKSTYIKSAVAVPRYNKDHKVQNLLAYVVLKDGVAEQFERQLDITKAIKEELKDIMMDY MMPSKFLYRDSLPLTTNGKIDIKGLMNEVNRR >gi|304425484|gb|AEEM01000019.1| GENE 241 244460 - 244582 76 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKEISQFVLKTLLYVLIFLALIYFFSYLGRGQGNFIYNEF >gi|304425484|gb|AEEM01000019.1| GENE 242 244833 - 245063 229 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFVSVLNQTINHHNWEVAMFKEIGTYIRIVDLLLAILLVLDRGVKSILVLAIAIFIISAA VQFMMSYKRLKFTAQL >gi|304425484|gb|AEEM01000019.1| GENE 243 245156 - 245365 456 69 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2058 NR:ns ## KEGG: GALLO_2058 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 69 1 69 69 77 98.0 2e-13 MSEKKYDAKLDQIKGNLKEGFGKVTGDKKLETEGFAEKTIAKGKELASDVKESAEGAVEG VKKALHKDN >gi|304425484|gb|AEEM01000019.1| GENE 244 245482 - 246105 824 207 aa, chain - ## HITS:1 COG:SP1315 KEGG:ns NR:ns ## COG: SP1315 COG1394 # Protein_GI_number: 15901169 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Streptococcus pneumoniae TIGR4 # 1 207 1 203 203 246 71.0 3e-65 MARLNVKPTRMELSNLKERLKTATRGHKLLKDKRDELMRRFVDLIRENNELRKEVEAALV GHMQDFVMAKSLENTLMVEEMFSVPTKEVQLFIETENVMSVTVPKMHSHIENPYGDDNGD VVYSYLASNSEMDDTLVAIEGLTEKLLRLAEIEKSCQLMADEIEKTRRRVNGLEYSTIPQ LEETIHYIELKLEETERANLVRIMKVK >gi|304425484|gb|AEEM01000019.1| GENE 245 246139 - 247533 1735 464 aa, chain - ## HITS:1 COG:SPy0155 KEGG:ns NR:ns ## COG: SPy0155 COG1156 # Protein_GI_number: 15674363 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Streptococcus pyogenes M1 GAS # 1 461 1 461 471 859 92.0 0 MSVLKEYRTVREVVGPLMIVDQVSGVHYNELVEIKLHNGEVRQGQVLEVQEDKAMVQLFE GSSGINLEKAKVRFTGHPLELPVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINP VARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVLNSDENFA VVFAAMGITFEEAEFFMNDLRQTGAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYE KDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSV TQIPILTMPEDDITHPIPDLTGYITEGQIILSHELYNSGYRPPINVLPSLSRLKDKGSGE GKTRGDHAATMNQLFAAYAQGKQAAELAVVLGESALSDTDKLYVEFTKRFEEEYINQGFQ TNRSIEETLDLGWELLSILPRTELKRIKDDMLDQYLPQTKTDDK >gi|304425484|gb|AEEM01000019.1| GENE 246 247535 - 249310 2546 591 aa, chain - ## HITS:1 COG:SP1317 KEGG:ns NR:ns ## COG: SP1317 COG1155 # Protein_GI_number: 15901171 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Streptococcus pneumoniae TIGR4 # 1 591 1 591 591 1007 83.0 0 MSQGKIIKVSGPLVVASGMQEANIQDICRVGDLGLIGEIIEMRRDQASIQVYEETSGIGP GEPVVTTGNPLSVELGPGLISQMFDGIQRPLDRFKTATNSDFLIRGVELPSLDREAKWDF VPSLEVGAEVSTGDILGTVQETSVVEHRIMVPNNVSGKLISITAGEFTVEETVYEIEQAD GSIFKGTLLQKWPVRKGRPVAQRLIPEEPLVTGQRVIDTFFPVTKGGAAAVPGPFGAGKT VVQHQIAKFANVDIVIYVGCGERGNEMTDVLNEFPELIDPNTGQSIMQRTVLIANTSNMP VAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLG SRIAEYYERAGRARVLGQEGREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPL AQRRHFPAINWLTSYSLYKDEVGKYVDKVQKTNWAAKVTQAMNILQRESSLEEIVRLVGI DSLSETDRLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLNNILNFADEAKKALELG AYFTEIMDGTVEVRDRMARSKYIAEENIDQIKALSEQAQEAIHQVLAKGGI >gi|304425484|gb|AEEM01000019.1| GENE 247 250114 - 250434 350 106 aa, chain - ## HITS:1 COG:SP1318 KEGG:ns NR:ns ## COG: SP1318 COG1436 # Protein_GI_number: 15901172 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit F # Organism: Streptococcus pneumoniae TIGR4 # 1 106 1 106 106 145 65.0 1e-35 MDNKKYKIGVVGNRDAILPFRMIGFNTFPVNHAQEAINTLRQLAMNDYGIVYLTEDIAAE IPDTIAYYDTQVTPAVILIPTHKGSAGLGLQRVQDNVEKAVGQNIL >gi|304425484|gb|AEEM01000019.1| GENE 248 250424 - 251434 948 336 aa, chain - ## HITS:1 COG:SP1319 KEGG:ns NR:ns ## COG: SP1319 COG1527 # Protein_GI_number: 15901173 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Streptococcus pneumoniae TIGR4 # 1 335 1 334 335 360 54.0 3e-99 MDSNLFSQINTTIAVKENSFITVDTFQKMLQAGNKDDIALLLQTTPYHLSVEELDDLTAI DASLMRELSQEYKWAFAEAPEKTIVNMFSLRYVYHNVKVLLKAKATGKDLSDLLIPIGEH SLEALQHMISALKSDFFPDFMVAEIRDIWAEYEDYKDIRVLEIGADLAYFNHLQKIAEQS EMPAFSQAATLMIDFYNVTTVQRALRQKKPRSFMLQLLSDNGSFTADEFIDLVENNDLIS WFNQVNPGILDTSLVAYEEKMLQGTISVVELEYLYDVMQFQLLDQARYEVQGPLVLARYL LGREFEVKNLRLLLSALCNDMPLEVVRERMRPIYGQ >gi|304425484|gb|AEEM01000019.1| GENE 249 251449 - 252033 724 194 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2064 NR:ns ## KEGG: GALLO_2064 # Name: not_defined # Def: putative V-type sodium ATP synthase, subunit E # Organism: S.gallolyticus # Pathway: Oxidative phosphorylation [PATH:sga00190]; Metabolic pathways [PATH:sga01100] # 1 194 1 194 194 293 100.0 2e-78 MSDTNALKQSIIEQAHQEGKLRLAAAEDKLTTEFEANKARLLREKEAERQSQLKDINQQF QIEAQQIRNQERQSTLVSKQKVLKELFAAAKDSMFAWTVTDELAFIRKILAKYSGQAVVV TFGQVTAEKLSATDITQLQSEFPKATFENDVIAGQAGLVISIGQVDDTYLYADLIESIYK EESSRIAADIFKEN >gi|304425484|gb|AEEM01000019.1| GENE 250 252104 - 252583 789 159 aa, chain - ## HITS:1 COG:SP1321 KEGG:ns NR:ns ## COG: SP1321 COG0636 # Protein_GI_number: 15901175 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Streptococcus pneumoniae TIGR4 # 1 158 1 158 158 228 90.0 5e-60 MEQLATYFSAHGGAFFGALGVALAVALSGMGSAYGVGKAGQAAAALLKEQPEKFASALIL QLLPGTQGLYGFVIGILIWLQLSPDLSVEKGVAYFFVALPVAIVGYFSAKHQGNVAVAGM QILAKRPEEFMKGAILAAMVETYAILAFVVSFLLTLRVG >gi|304425484|gb|AEEM01000019.1| GENE 251 252585 - 254579 1375 664 aa, chain - ## HITS:1 COG:SP1322 KEGG:ns NR:ns ## COG: SP1322 COG1269 # Protein_GI_number: 15901176 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Streptococcus pneumoniae TIGR4 # 1 659 1 663 663 706 55.0 0 MAISQMKKISLIFSKETLDALLLVLQQSQVVQIRDITQMTDWQEAFETAQVNLPQIHLQE SDKELTGEEVLSHLAKRQQSLETTIGKLQHFIPKEGTIQSLRKADFSMSFAELEAFGRDN SADVLINRVNDKIKQNRNLERRIAEHQAEINRLMNWRSLEVTPKELSHFDFVHAVVGTIP KTDDDALYHNLKANSALEVQDVFSSELEYGVIVFQSGKVMSSLDDYAFKSFDYDKTILPA QAISQMQDEVAAWTAEKLEVEGELKVSQRELQALKVQTDYVLGLYARQEAKKKLASTKHL VALEGWAEAEQIDRLKSDIQAQFGDGVFIQELDVVEDDWENVPIKLKNHPLIEPFELVTE MYALPKYYEKDPTPILMPFYFTFFGMMVADLGYGLFLFLATFLALKLFNLPKGTRRFLKF FNILAVAVSLWGIVYGSFFGYTMPIVLLSTTTDVMTILLLSVAFGFVTVVVGLLLGGLQK LRLKDYAESYNSGFAWCLILIGILLIVLGAMLPHLSVLTTIGAVLAIANAIGIVIVSIIQ AKSLVGLGSGLYNLYNISGYVGDLVSFTRLMALGLSGASIGSAFNLIVEIFPPVARFTIG IVIFILLHAINIFLSLLSGYVHGARLMFVEFFGKFYEGGGKPFRPLKSSEKYVKVTIKSQ SEEN >gi|304425484|gb|AEEM01000019.1| GENE 252 254569 - 254892 317 107 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2067 NR:ns ## KEGG: GALLO_2067 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 107 1 107 107 152 99.0 5e-36 MANSILETMQGIEAEAKQVLAAYDAKVQGLRSQFTQELERIETDCDQKTQIEVEGLSKEL AEKTTQLKENLTTTIAKNDSNVRSVLMTRKDGLVQQIVDRVVEKYGN >gi|304425484|gb|AEEM01000019.1| GENE 253 255275 - 255409 220 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15674431|ref|NP_268605.1| 50S ribosomal protein L34 [Streptococcus pyogenes M1 GAS] # 1 44 1 44 44 89 97 2e-16 MKRTYQPSKIRRQRKHGFRHRMSTKNGRRVLAARRRKGRKVLSA >gi|304425484|gb|AEEM01000019.1| GENE 254 255614 - 256015 412 133 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2071 NR:ns ## KEGG: GALLO_2071 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 133 1 133 133 230 95.0 1e-59 MKKFIVVVGCTFGLLFSLLGANGYLVASDVDASTVSHKTGNYTIDKILSSYEDEEFFTKD YVDEMFNDWSIDENTKVIADEEGGLFYSLTNNHAVLKTYDTDSGQVVEELSLDSPRATTV GDLKEALYEALEE >gi|304425484|gb|AEEM01000019.1| GENE 255 256163 - 256549 253 128 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2072 NR:ns ## KEGG: GALLO_2072 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 128 1 128 128 208 98.0 4e-53 MNYVKRVIIYFLMGVGFGSLVYLFFLWQSGAETQTVQHIANVVFISGLIGLVSMIFEVEA IPIAWEILIHFCLVYGLYSWLEKLNGIVWSWHLLGEFSLTYLVIWFVIYISFNNRVKNIN QRLREKNG >gi|304425484|gb|AEEM01000019.1| GENE 256 256560 - 257015 469 151 aa, chain - ## HITS:1 COG:SA0251 KEGG:ns NR:ns ## COG: SA0251 COG3279 # Protein_GI_number: 15925964 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Staphylococcus aureus N315 # 9 151 106 245 246 58 25.0 3e-09 MHYQFEEDKQLPKDVIEVLVKSCQLDNSVQKVLDYLAQFEQKEPTVLPIKTVDRIEMLRV ADLILVDVDGSALILETTQGRLLTNDRLYKFRQRLANPDFVQVSKHALININHLKALENS FSGNMLAILTGKIKTDVSRRYLSELEKRLGL >gi|304425484|gb|AEEM01000019.1| GENE 257 257038 - 257877 734 279 aa, chain - ## HITS:1 COG:lin0986 KEGG:ns NR:ns ## COG: lin0986 COG0842 # Protein_GI_number: 16800055 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 4 274 1 284 284 120 30.0 4e-27 MVAMTKRNLKLYFSNKMSVFFSLLGALIAFGLYIIFLQKNMQDSWSGTPHLEEILDNWVI GGTLAITSITTTWTGIVRLVHDRENHKLEDFLLTDTSRFKVYLGYLMSASVIGFTMQAFM FVVMKLYFHWQDNISLSGSHLPQILGIMVLGSLLGASLALLILQFVKSIESSEALSTIVG TVSGFLVGVYMPLGTLPNIAQIVVKITPAAYVAAAYRQTLINQDYLGKSEKVYLGIGLKL KELTTVNQELLIISGVLVISLGILGMMLIVKEKRPVISG >gi|304425484|gb|AEEM01000019.1| GENE 258 257878 - 258729 812 283 aa, chain - ## HITS:1 COG:Cgl2008 KEGG:ns NR:ns ## COG: Cgl2008 COG1131 # Protein_GI_number: 19553258 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 2 279 4 287 292 203 40.0 4e-52 MLIRTKNLTKTFGDQLVIDHLNLEVEEGMLLAYIGTNGAGKSTTMRMLTGLLAPTSGEIE LAPDLKIGMVFQGSVLDAELTVLDNLRSRSALYRNRDKDWMGKLIRLTGIDAFLNQTYGT LSGGQRRRVDIVRALLNKPNLLFLDEPTTGLDIQTREAIWQLLRQLQAEENLTIFLTTHY LEEAENADMAYIIDHGKVLAKGSAKELKETYTQPHLLIKTQQVKAFQDIDYYLQADDCLK IEVNSVSEALAILSDKRAVIEDFDYKKANINDVFLSITGREMA >gi|304425484|gb|AEEM01000019.1| GENE 259 258852 - 259850 1352 332 aa, chain - ## HITS:1 COG:SPy0248 KEGG:ns NR:ns ## COG: SPy0248 COG1847 # Protein_GI_number: 15674430 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 329 1 301 304 327 61.0 2e-89 MVIFTGRTVEDAIEKGLKELHLSRLKAHIKVVSREKKGFLGFGKKPAQVDIEGINEVTAH RANQKVVKGVPEEVNQKNEPVSSKFEDTMELRKVASIIKKMEERGEVIDDSVKEDIVMHK KKTQTILEEAGHTEVLEALEKAEEPVEEDVQVDESPEVAKTEQSFEEFVASEFPAQRELS KDIEKATEEVAEYVKKIIYEMDIDATVETSHNRRQINLQIETPEAGRVIGYHGKVLKSLQ LLSQNFLHDRYSKNFSVILNVHDYVEHRTETLIEFTRKAANRVLETGKDYVMDPMSNSER KIVHKTITSIDGVDSYSEGNDPNRYVVVTAVQ >gi|304425484|gb|AEEM01000019.1| GENE 260 259863 - 260678 820 271 aa, chain - ## HITS:1 COG:SPy0247 KEGG:ns NR:ns ## COG: SPy0247 COG0706 # Protein_GI_number: 15674429 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Streptococcus pyogenes M1 GAS # 1 245 7 250 275 337 70.0 2e-92 MKRKIKLLGLSSLTLILLAACGRSEVTASSTNGWDQIVYFFAKAIQWLSINGRIGVGIVL FTIIIRAIMMPLYNMQIKSGQKMQDLQPELKKLQEKYPGRDTDSRMKLTEESQALYKEYG VNPYATMLPLVVQLPILMALYQALTRVAFLKTGTFLWIELSKPDPYFILPVLAALFTFLS SWLTNKAAREKNIAMTVMTYVMPIMIFFMSFRLASGVVLYWSVSYAFQVFQILLLNNPFK IIAKRLEEEQAEKERAAKIRRAKKKAQKRRK >gi|304425484|gb|AEEM01000019.1| GENE 261 260662 - 261021 369 119 aa, chain - ## HITS:1 COG:SPy0246 KEGG:ns NR:ns ## COG: SPy0246 COG0594 # Protein_GI_number: 15674428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Streptococcus pyogenes M1 GAS # 1 118 1 118 119 135 64.0 2e-32 MKKTYRVKSDKDFQAIFSKGTSVANRKFVVYQLEKNQGHYRVGLSVSKKLGNAVTRNSIK RKIRHVVMELSPNLRHHDFVIIARKGVEELDYHEVKKNLLHVLKLANLYQEGLNSEKKD >gi|304425484|gb|AEEM01000019.1| GENE 262 261150 - 262544 1394 464 aa, chain - ## HITS:1 COG:L0114 KEGG:ns NR:ns ## COG: L0114 COG0165 # Protein_GI_number: 15672107 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Lactococcus lactis # 7 461 4 458 459 653 70.0 0 MATENHKLWGGRFEAGLEKWVEEFGASISFDQKMAEFDLKGSIAHVTMLGETGIIAKDEA AQIKEGLEELLAEYKAGKIEFDVSNEDIHMNMESLLTAKIGPVAGKLHTARSRNDQVATD MHLYLKAKLDEVIEKLGNLRQTLVDLADEHVYTIMPGYTHLQHAQPISFGHHLMAYYNMF TRDSERFEFNVKHTDISPLGAAALAGTTFPIDREMTAELMGFAKPYSNSLDAVSDRDFIL EFLANSSILMMHMSRICEEIISWCSNEFKFVTLSDTFSTGSSIMPQKKNPDMAELIRGKS GRVYGNLFGLLTVMKSLPLAYNKDLQEDKEGMFDTVETITVAIDILAGMLKTMTVNKEHM AESTEKDFSNATELADYLASKGLPFRQAHEIVGKLVLECTKAGYYLQDVPFERYQEISDL IDEDIYETLKSHTAVERRHSLGGTGFDQVKWQIKEAKNSLKATH >gi|304425484|gb|AEEM01000019.1| GENE 263 263042 - 264232 1646 396 aa, chain - ## HITS:1 COG:lin2195 KEGG:ns NR:ns ## COG: lin2195 COG0137 # Protein_GI_number: 16801260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Listeria innocua # 1 396 1 397 404 600 71.0 1e-171 MSKEKVILAYSGGLDTSVAITWLMKDYDVVAVCMDVGEGKDLDFIHDKALKVGAVESYVL DVKDEFAEEYVLPALQAHAYYEQKYPLVSALSRPVISKKLVEIAHKTGATTIAHGCTGKG NDQVRFEVAIAALDPNLKVIAPVREWKWSREEEIEYAKANGVPVPADLDNPYSVDQNLWG RANECGVLENPWNQAPEDAFGITTSPEEAPDTPEFVDIEFKEGKPVALNGEELKLADLIQ KLNTIAGKHGVGRIDHVENRLVGIKSREIYECPGAITLLTAHKEIEDITLVREVSHFKPI LENELSNLIYNALWFSPATEAIIAYIKETQKVVNGTAKVKLYKGHAQVVARKSPNSLYDE NLATYTSADSFDQDAAVGFIKLWGLPTQVNSQVNNK >gi|304425484|gb|AEEM01000019.1| GENE 264 264467 - 265648 692 393 aa, chain - ## HITS:1 COG:BS_yfmI KEGG:ns NR:ns ## COG: BS_yfmI COG0477 # Protein_GI_number: 16077813 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 1 385 1 391 406 145 28.0 1e-34 MTKAFWRLLVSQSVANLADVFFRVVIIANIFVLSGSILATSMAPILIGLSSFVASFLVPL VTRKIALNKVLLLTQGGKTVIFLLLVLLFYRFGNVSLLFLYVFIILISLLDGFAAPVSHA IIPQYATDLGKANAALSMSDESIQLVGWGLGGLLFAIMGLRTSMIIILVMFIISTVVMCF LPLVDIEKVESETSFETLTKGWFLVIKHPQLRFLVQANLLEILANTIWVSSVILVFVTDI LHQTESYWGYVNSAYSLGILLGGFLVFRLSEKILNYKWQSMFFSLLAMAIVTLCIIQVPK ANYFLIFSALTGFLSQLKEISESVMLQESVDDYNLVNVYSVFEVISTLAFSCFVFLIGLI TDYFGVLTGFWLAMVCLILESILVFINRSKLIK >gi|304425484|gb|AEEM01000019.1| GENE 265 265721 - 265897 211 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEMLRIILFILAPVIAYHLCLLLLPSVIDWLYIIYNILLMISLWFAAYFIGEIKKDDI >gi|304425484|gb|AEEM01000019.1| GENE 266 266056 - 266784 510 242 aa, chain - ## HITS:1 COG:no KEGG:SMU.1809 NR:ns ## KEGG: SMU.1809 # Name: scnG # Def: putative bacteroiocin operon protein ScnG-like protein # Organism: S.mutans # Pathway: not_defined # 2 242 1 241 243 237 57.0 2e-61 MIAYISAEWQKLNKKQLLLVGFLLFAVSSFIGLSTYYLNRSIFIEGTQSLVMWGQLTLFN SQIFFPALLAIFMGISLMPEFERTTLEMLRANNVSLSKLLLSKLASLIVILVPLQLLLVI TWFIALSIDHINVTNEIVVHLKWAFLSLFGAVTILSVQAFILSKTRNFSKSVGLAAMGAI GGIILLFINENLNKYYPYSLVMIALRSRALEDFQLTDLIVFIVVNIIYSFVFYKLTCKEL AR >gi|304425484|gb|AEEM01000019.1| GENE 267 266781 - 267524 399 247 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0329 NR:ns ## KEGG: SmuNN2025_0329 # Name: scnE # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 244 1 246 250 229 51.0 7e-59 MLKAIQIELLKSKRTKSFIIATLIVTMGLLWKIAAFLGHTNGVEVFFDNQDIHVFVLPIA ISIYISRIISNEKEGRTFKLQASNGRGITEIFHQKLYFSIVFFGLMALLYTAGISLYLIL AEGQEVPIYIFGIQVLSLLLVSFVQICIYMTLAMILEKQGLVLAMGFIGAFLGFIFQGKT SQFWTFLIPWDGTGFLSIYKFGYDVETNTIFHTPENHLALRICIYAVYALIWYGIARHNI TSKGEVS >gi|304425484|gb|AEEM01000019.1| GENE 268 267526 - 268434 266 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 301 1 303 305 107 27 7e-22 METVIQLTNLKKTYGNVTTVDLDYITVRKGEIYGFLGPNGAGKTTTMKMILSLVKPISGT IEIFDEEITKNLDYLNQIGSTIEEPSYYPNLTGYENLLVFQKMLGFDSKNIPEILELVGL AEEKNRKKLVKDYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVKLAK EEGLTIFISSHILSEIEHIADRVGIINHGRLVYEGEIEKIKSNTWVEIGGNFSQKNVAKT ICEKTNATILSVTDSMLTLADLDNQSISEVVAALVKADYSIFRVERQKETLEDIFLALTK ED >gi|304425484|gb|AEEM01000019.1| GENE 269 268601 - 269299 457 232 aa, chain + ## HITS:1 COG:CAC0289 KEGG:ns NR:ns ## COG: CAC0289 COG0745 # Protein_GI_number: 15893581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 11 232 8 235 235 158 39.0 1e-38 MDFEASLLKKRILIVDDDYSLNTSIKEVLKNAGFQHISCAYSISNSVDLLSMNNIDLIIL DVMLPDGEGYSLAKDVRKHSDIPILFLTAKNNPEDEINGLKAGGDDYVTKPFLPQVLIYR IMTLLRRAYKCDTELIELDNCTIHLTNALVQKGNVELSLTPTEIQILKKLYANKNYIVST ESICDSVWKGENFGYEKSLMVHIRNIREKIEDNPSKPQHIVTVKGLGYKFVL >gi|304425484|gb|AEEM01000019.1| GENE 270 269309 - 270658 892 449 aa, chain + ## HITS:1 COG:CAC0290 KEGG:ns NR:ns ## COG: CAC0290 COG0642 # Protein_GI_number: 15893582 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 10 435 15 452 467 125 24.0 1e-28 MFAFNTIKRFIKRFISSFVILLLLDIIVFVILGYQQTQETSATDTVNQIAQNFSFDNSVT LSNEGKKIVKQNNLWVMVIDSENGNQVFHYRTPKTLKEHYDLADVAQFSRFYLDDYPVFT HIVDNNLIVIGFPKDRIFKFPSNYYEKSYITYICWLIFGIIATNIIYFIGLYFYSTHFIN KKLQPVTQAITRLPQGLDTNLEKQDDFQKLINAINQADKELKDSRTFKEEWISGIAHDIK TPLSVIVSNASLAKSKSNDTEIRHHIEPILVEGYYIQNILNDLNIFARLTDSQFQLKKET IRLVPFFKEIIIQIINQGIWENFQFDFDYDEGLAEKNVLFEPNLISRVIHNVIYNSVLHN PNGCQISIYLHDRGDFFHITIRDNGVGVSCSKLANLYQQEDTEFDIAGVRRHGMGLKIAR QIVQVHKGKLAISSELNHYFQVDIDLPFE >gi|304425484|gb|AEEM01000019.1| GENE 271 270705 - 271871 1035 388 aa, chain - ## HITS:1 COG:SP0101 KEGG:ns NR:ns ## COG: SP0101 COG2807 # Protein_GI_number: 15900044 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Streptococcus pneumoniae TIGR4 # 3 388 2 388 388 349 54.0 6e-96 MKKDYSSFFVSGIILVGAVLRIPFTTIPTVLSYVADGLGVSVNSLGILTSIPLIMFAFCS SLAPRLADKFGLEKLFTMVLIAMFIGSSMRVINLPSLYLGTMIIGVSIAMMNVLLPSVIL ANQPLRIGLLTTVYTTAMGLASSVASSVAVPIVKMTSWKGLILLLSFLILLALVVWFPNT FHNHVTEKDEEAHVGSLWKNKRALALLVFGGLQSLLFYTGMTWLPTMASQAAVSSEAAGI LASIYSLISLPFSLTIPTLATNLLAKNRKIMLAIVSACGIIGTGMLLFQSSSFVYWLLVN VLIGIAVSALFPYLLVAFSMKSHTPSQTAQLSGMVQSGGYFLAAFGPTLFGYSFDLFGSW TVAALCLFICTIIMTVALFYTERFEKIL >gi|304425484|gb|AEEM01000019.1| GENE 272 272357 - 273841 1980 494 aa, chain - ## HITS:1 COG:SP2069 KEGG:ns NR:ns ## COG: SP2069 COG0008 # Protein_GI_number: 15901888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Streptococcus pneumoniae TIGR4 # 10 493 1 484 486 870 91.0 0 MIEIQQETKMPKKIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGDFVIRIEDTDRKRH VEDGERSQLENLKWLGMDWDESPQTHEKYRQSERLDIYQKYIDQLLAEGKAYKSYVTEEE LAAERERQEAAGETPRYINEFLGMSEDEKAAYIAEREAKGIVPTVRLAVNESGIYKWHDI VKGDIEFEGGNIGGDWVIQKKDGYPTYNFAVVIDDRLMEISHVIRGDDHIANTPKQLMVY EALGWEAPEFGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYMPEAVFNFIALLGWNP GGEDEIFSREELIKLFDENRLSKSPAAFDQKKMDWMSNEYIKNADFDTIFAMAKPFLEEA GRLTDKAEKLVELYKPQMKSVDEIIPLTDLFFEDFPELTDAEKEFMAGETVPTVLEAFKA KLEAMSDEDFKSENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIYLLGRE KSIEHIENMLNSLK >gi|304425484|gb|AEEM01000019.1| GENE 273 273999 - 274493 514 164 aa, chain - ## HITS:1 COG:SP1384 KEGG:ns NR:ns ## COG: SP1384 COG4894 # Protein_GI_number: 15901238 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 159 5 164 165 125 41.0 5e-29 MRSFEIKQKLWSLAGKFDIKDETGQLAYHVQGSFLKFLKEFTISDSQGQFVSHIKHHFSF PFQRFTVTFAHGKQITIQQRFSLLKAKYDISDFGLEVAGDIWNMNFSLLDQGREVASIHQ EWFKIASTYHVDIYDDSLADLVISLVIAIDYVKAIESSSSSASS >gi|304425484|gb|AEEM01000019.1| GENE 274 274596 - 275090 640 164 aa, chain - ## HITS:1 COG:SP0024 KEGG:ns NR:ns ## COG: SP0024 COG0288 # Protein_GI_number: 15899971 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Streptococcus pneumoniae TIGR4 # 1 160 1 160 165 251 76.0 3e-67 MSYFENFLKTNQAYADLHGTEHLPQKPKTHVAIVTCMDSRLHVAQALGLALGDAHILRNA GGRVTDDIIRSLVISQQQLGTREIVVLHHTDCGAQSFTNEAFAAQLERDLGVDVHDKDFL PFSDVEESVREDIAILRNSPLIPEDVVISGAVYDVDTGRMREIK >gi|304425484|gb|AEEM01000019.1| GENE 275 275216 - 276463 1424 415 aa, chain - ## HITS:1 COG:SPy0236 KEGG:ns NR:ns ## COG: SPy0236 COG1066 # Protein_GI_number: 15674421 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Streptococcus pyogenes M1 GAS # 6 415 44 453 453 711 91.0 0 MQEVKNARVSLTGEKSKPTKLKDVSSIHYSRTKTGMDEFNRVLGGGVVPGSLVLIGGDPG IGKSTLLLQVSIQLADKGTVLYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQAIRAQ IEQIQPDFLIIDSIQTIMSPDISGVQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEG QLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQ VFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAKRTTTGLDFNRVSLIMAVL EKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTNPQEAFIGEIGLTGE IRRVTRIEQRINEAAKLGFTKVYAPKNSLSGIDIPDNIQVIGVTTVGEVLKQVFA >gi|304425484|gb|AEEM01000019.1| GENE 276 276595 - 277128 494 177 aa, chain - ## HITS:1 COG:SP0022 KEGG:ns NR:ns ## COG: SP0022 COG0406 # Protein_GI_number: 15899970 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 177 1 169 171 156 47.0 2e-38 MRIIFVRHSEPDYSMLDRCENPEKYSGFGRDLAPLTEHGRNLAREVAKKEVFQSADVIIS SSITRALETATYIARETGLDLLVEPFFHEWRPDLDSLNYTGEAVAKAYRIFWENNGKLEE NSCYRYETAEQVKQRFLAALEKYRRYDTVIIVTHGVLMRQFVSQKEIAYGEIITVDL >gi|304425484|gb|AEEM01000019.1| GENE 277 277159 - 277605 647 148 aa, chain - ## HITS:1 COG:SP0021 KEGG:ns NR:ns ## COG: SP0021 COG0756 # Protein_GI_number: 15899969 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Streptococcus pneumoniae TIGR4 # 3 147 2 146 147 235 83.0 3e-62 MSKIRGFELVSQFTDETLLPKRETAHAAGYDLKAAETTEIAAGEIKLVPTGVKAYMQAGE VLYLFDRSSNPRKKGLVLINSVGVIDGDYYGNPANEGHIFAQMKNITNETVVVEAGERIV QGVFMPFLVADGDEVDGVRTGGFGSTGK >gi|304425484|gb|AEEM01000019.1| GENE 278 277699 - 278928 798 409 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2089 NR:ns ## KEGG: GALLO_2089 # Name: not_defined # Def: putative major facilitator family transporter # Organism: S.gallolyticus # Pathway: not_defined # 1 393 1 393 399 583 98.0 1e-165 MKKFRSSFFLLSEAAGIVASSVYGLTLSFIVQRYVDSQFLNSLVSNISVTLSMLMAFFTG YIVDKKSPWKLILLSDLVLIPLFIIPIFLFEVSIPLFLISIVIIDMISIVVSELDEISRP VYLSLITTKEKSVSVLQSINIVDSAFAIVGYLFVFLTISFLKINTYFIIVSICYLFSAMF IFHLPKETKEKQPLSETQESFILALRELLQVIVGLKQVGLYLANLLFMVKNQIVMSLLIF RIGQIDKGFTHIHIIGIGILLSVAGGAVLNKILYLAKVSVRKVLSMLLIACSGYFTYLVG HAQTVEHFLLFGLAIGAIFGTGLPCFGLLSAERMLVTPDNHQGKSLSLLRTSSVVLTLSL TACFAIVEKLCHLTTIFFDGSAVLAIILVLLFFALPFTELNSVRKNSNK >gi|304425484|gb|AEEM01000019.1| GENE 279 278944 - 280146 513 400 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2090 NR:ns ## KEGG: GALLO_2090 # Name: not_defined # Def: putative major facilitator family transporter # Organism: S.gallolyticus # Pathway: not_defined # 1 400 1 400 400 630 99.0 1e-179 MKIKTFTSNFYHLILSRSTRNIADSFYLIALSIGLVQVYQIDAAKLSLFTLLGLLPNVTS IFYGPFLNRIKNDKKWLMIFQISQLVVIVGIILCLNYQFAVLWMYSLNFIFNLLTTLLNT MQMKITPETLDNDSELIDKSVDIQYKTSNVLDIISNFIASSLLAFISYLVLLQLSIPFFI GAIYFMFRVKLDTRAIRQFSKEHEKEKLRLLESVEAFRESKFASLIIFIEAFLSGGTDLL LTLVPLYLLQEKIPIGYLGVVLAVQRGADLLGALLAPRIRIRPRHFFCIDYTISGLCLLF VFIIPYPLVKLLLFFIAFVVIGVSGNIFEKMIYAEYDNNKVALIYTASSSLYAIFGILFL LIPSFYQNITVLGISINIMTFGIGVYLLIKSGVLVKGELS >gi|304425484|gb|AEEM01000019.1| GENE 280 280311 - 281078 735 255 aa, chain - ## HITS:1 COG:SPy0233 KEGG:ns NR:ns ## COG: SPy0233 COG1636 # Protein_GI_number: 15674419 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 255 1 255 255 421 78.0 1e-118 MIDLEEILSKMNPNQKINYDRVMQQMAKRWMQEEIRPRILVHVCCAPCSTYTLEYLTQYA DLTVYFANSNIHPKEEYYRRAYVVQKFVSDFNEKTGNNVQFIEAPYDPSEYFQKVHGFEE EPEGGERCRVCFDYRLDKAAKMAVELGFDYFASALTISPHKNSQVINSVGIEVQKVYATK YLPSDFKKNNGYRRSVEMCEEYDIYRQCYCGCVFAAKMQGIDFTQIKKEAKEFMVGKDGE KEFPHIRFTFEGKEI >gi|304425484|gb|AEEM01000019.1| GENE 281 281274 - 282290 1559 338 aa, chain + ## HITS:1 COG:SPy0226 KEGG:ns NR:ns ## COG: SPy0226 COG0240 # Protein_GI_number: 15674414 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 1 338 1 338 338 580 86.0 1e-165 MTRQKVAVLGPGSWGTALAQVLNDNGHDVCLWGNIPDQIEELNTKHTNTRYFKDITISEN IKATLDLKEALTDVDAILFVVPTKVTRLVAKQVAETLDHKAVIMHASKGLEPSTHERLST ILEEEIPAELRSEIVVVSGPSHAEETIVRDITLITAASKDHEAAKYVQELFSNNYFRLYT NTDVVGVETAGALKNIIAVGAGALHGLGYGDNAKAAVITRGLAEITRLGVKMGANPLTYS GLSGVGDLIVTGTSVHSRNWRAGDALGRGEKLEDIEKNMGMVIEGISTTKVAYELAKELD VYMPITSAIYKVIYEGGDVRESILGMMSNDFRSENEWH >gi|304425484|gb|AEEM01000019.1| GENE 282 282350 - 283264 999 304 aa, chain + ## HITS:1 COG:SP2092 KEGG:ns NR:ns ## COG: SP2092 COG1210 # Protein_GI_number: 15901907 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 3 294 4 295 299 510 90.0 1e-144 MRKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGKS KRSIEDHFDSNFELEYNLEHKGKTDLLKLVNDTTAINLHFIRQSHPRGLGDAVLQAKAFV GNEPFVVMLGDDLMDINNDKAVPLTKQLINDYETTHASTIAVMPVPHEEVSSYGVIAPQG EGIDGLYSVETFVEKPAPEDAPSDLAIIGRYLLTPEIFNILETQEPGAGNEIQLTDAIDT LNKTQRVFARQFNGDRYDVGDKFGFMKTSIDYALQHPQIKDSMKQYLIDLGKELEADSKK EETK >gi|304425484|gb|AEEM01000019.1| GENE 283 283311 - 283982 804 223 aa, chain - ## HITS:1 COG:SP2094 KEGG:ns NR:ns ## COG: SP2094 COG0705 # Protein_GI_number: 15901909 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Streptococcus pneumoniae TIGR4 # 6 222 7 223 225 177 44.0 1e-44 MKNEIKRNPITIFLLVLTTLVFLAMQIVYFGNATSGQAILNFGGMYGAYVSLVPTQLWRL VTPIFVHIGWEHFFFNALTLYFVGQIAEQIWGHHKFLALYVLSGVVGNAFTLFFTPNVIA AGASTSLFGVFAAIMVVGYFGRNPFLKELGRNYQLLILINLLFNLFTPGVGIIGHIGGLV GGILCAIFLPTIVEKDMFKPWQRWLAAGAYVILNLILILAALT >gi|304425484|gb|AEEM01000019.1| GENE 284 283979 - 284506 519 175 aa, chain - ## HITS:1 COG:L172782 KEGG:ns NR:ns ## COG: L172782 COG0212 # Protein_GI_number: 15672151 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Lactococcus lactis # 3 173 4 169 177 149 45.0 2e-36 MEKSQLRVAILTQLKEHDKAEKAAKDKALLEDLVASAAYQNAQTIATYLAFDFEYDTQLL INQAQKDGKKILVPKTYSKGKMIFCPYDKDNLVKTRFGLWEPAVANAVDKSQIDVIHVPG VGFNPAGFRIGYGGGYYDRYLADYDGHTVSTIYEFQKAEFQADCHDMAVKEVFSR >gi|304425484|gb|AEEM01000019.1| GENE 285 284790 - 285920 1168 376 aa, chain - ## HITS:1 COG:SP2096 KEGG:ns NR:ns ## COG: SP2096 COG1473 # Protein_GI_number: 15901911 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 3 375 2 374 376 609 75.0 1e-174 MTLDLVNIRRDLHQIPEIGLEEFKTQAYLLERIAEITAGKDFVEQRTWRTGILVFLNGSA PEKTIGWRTDIDALPIVEETGLPFASQHEGRMHACGHDMHMTVALGLLNELVQVQPKNNV LFLFQPAEENEAGGMLMYQDNAFGDWKPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVL VTFKGKGGHAAFPHEANDALVAASYFVTQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVI AETARLHGTIRTLTQDMSLHIQKRLTEIAKGVAASFDMEVDVNLKQGGYLPVENNPELAQ DLMAFFRNREAVNLIDCPPAMTGEDFGYLLNKIPGVMFWLGVDTPYALHHPQMRPNEAAL PFAVSEISAFLKEKAK >gi|304425484|gb|AEEM01000019.1| GENE 286 286423 - 287121 1170 232 aa, chain - ## HITS:1 COG:SP2097 KEGG:ns NR:ns ## COG: SP2097 COG2171 # Protein_GI_number: 15901912 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 232 1 232 232 333 86.0 1e-91 MTAQKMTAQEIIAFIGNAEKKTNVKVTFEGELAAAVPESVIKLGNVLFGDWKDIEPLLAN LTENKDYVVEQDGRNSAVPLLDKRHINARIEPGAIIRDQVTIEDNAVVMMGAVINIGAEI GAGTMIDMGAVLGGRAIVGKNSHIGAGAVLAGVIEPASADPVRIGDNVLVGANAVVIEGV QVGNGSVVAAGAIVTKDVPENVVVAGVPARVIKEIDAKTQQKTALEDALRNL >gi|304425484|gb|AEEM01000019.1| GENE 287 287372 - 288007 879 211 aa, chain - ## HITS:1 COG:no KEGG:SDEG_2141 NR:ns ## KEGG: SDEG_2141 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 46 211 11 174 174 132 46.0 1e-29 MVVENFKENGDTKMAKKIKAEDGKVYVEKKPFYKRVWFIVLAVIVVIGVFASMGGSDDSE EATSKSTTTSKATTTDSSSKASSEETETTYKVGDVITFDDEAEFTITGAEWTDERNEFDD TNPERVLKVTYNVKNLSDDDYVLGTDLELYVNGQKMDTYPNGSTFDSISKGRSYEGAVEY FGVNGSGDIEVEVEPSFSFTTEPAVVKLDIQ >gi|304425484|gb|AEEM01000019.1| GENE 288 288131 - 289480 1868 449 aa, chain - ## HITS:1 COG:SPy0215 KEGG:ns NR:ns ## COG: SPy0215 COG0166 # Protein_GI_number: 15674409 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 449 1 449 449 781 85.0 0 MTHIKFDYSKLLGQFVEQEEIDFMQPQVNAADEYLRKGTGPGSDFLGWLDLPENYDKEEF ARIQKAAAKIQSDSEVLVVIGIGGSYLGARAAIDFLSNHFYNLQASADRKGPQILYAGNS ISSTYLADLVEYVKDKDFSVNVISKSGTTTEPAIAFRVFKELLIEKYGQEEANKRIYATT DKAKGAVKVEAVANDWETFVVPDNVGGRFSVLTAVGLLPIAAAGIDIEALMTGANAARQE LTSAEISENIAYQYAAIRNILYRKGYITEILANYEPSLQYFGEWWKQLAGESEGKHQKGI YPTSANFSTDLHSLGQFIQEGYRNIFETVVRIDKPRKNVVIPELSEDLDGLGYLQGKDVD FVNKKATDGVLLAHTDGGVPNMFLTLPQQDEFTLGYTIYFFELAIGLSGYLNAVNPFNQP GVEAYKKNMFALLGKPGFEDLSAELNARL >gi|304425484|gb|AEEM01000019.1| GENE 289 289528 - 289716 85 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHDFSMIFTKLSHLNKAFTKLLKTFMKQPFCDENFTDFYSYSHVTTQMTLDFSKRLNTIK IF >gi|304425484|gb|AEEM01000019.1| GENE 290 289919 - 290389 663 156 aa, chain - ## HITS:1 COG:SP0020 KEGG:ns NR:ns ## COG: SP0020 COG0590 # Protein_GI_number: 15899968 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Streptococcus pneumoniae TIGR4 # 1 144 12 155 155 229 79.0 2e-60 MREALKEAQKSLAKEEIPIGCVIVKNGVIIGRGHNAREERQKAILHAEIMAIDDANENEG SWRLLDSTLFVTIEPCVMCSGAIGLARIPQVIYGAANQKFGGAGSLYDILTDVRLNHRVE VETGILETECAAIMQDFFRKNREKKKAAKQAAKEQS >gi|304425484|gb|AEEM01000019.1| GENE 291 290425 - 291201 1134 258 aa, chain - ## HITS:1 COG:SPy0208 KEGG:ns NR:ns ## COG: SPy0208 COG1234 # Protein_GI_number: 15674406 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Streptococcus pyogenes M1 GAS # 1 258 1 258 259 422 78.0 1e-118 MKLTTLGCWGAYPYKDGGTTSYLVTSEDGFQLLMDCGSRAVTELEKEISPLDLDAVIISH YHPDHVADLGVLRHYFQLYPKHLWEPKILPIYGHTEDEQEFAKLTLDGVSQGKAYDVNGV EKIGPFDITFIKTVHPVPCYAFRIVERATGQTLVFTGDTGYFEGLDKFAAGADLFLADVY LYAGNENHPAHLTTKEAGQIAKAAGVTSLVLTHTPPVPPQGIDAENHLQVLKKEAENYAD GVPVDLAEPHKSWQLGEL >gi|304425484|gb|AEEM01000019.1| GENE 292 291261 - 291791 617 176 aa, chain - ## HITS:1 COG:SPy0207 KEGG:ns NR:ns ## COG: SPy0207 COG1268 # Protein_GI_number: 15674405 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 174 1 175 179 140 58.0 2e-33 MKNVRDLLYIAMMTTILVILGFIPAIPLGFIPVPIVLQNLGIMLAGVLLGWKKGCLSILL FFLLGMFIPAFSGSTLFAVFAGPTAGYVVAWFFVPILINVILKIFKTSSFINNLIAILLG GVLFVDVMGAIYLSVYIHTSLLTSLLSNLVFIPGDTIKAIIASVVAYKFKDRLMVS >gi|304425484|gb|AEEM01000019.1| GENE 293 291795 - 292097 73 100 aa, chain - ## HITS:1 COG:SPy0205 KEGG:ns NR:ns ## COG: SPy0205 COG4357 # Protein_GI_number: 15674404 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 4 98 5 99 103 98 54.0 4e-21 MIIYGINLDSKGRCKHYHTKQDIVALKCGKCQDYFACYQCHNQLRNHPFESVSVKAASPV LCGNCRHFLTYAEYKKGACPYCYHDFNPNCRLHETIYFKE >gi|304425484|gb|AEEM01000019.1| GENE 294 292229 - 293371 1446 380 aa, chain - ## HITS:1 COG:SPy0203 KEGG:ns NR:ns ## COG: SPy0203 COG0343 # Protein_GI_number: 15674403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 380 1 380 380 776 93.0 0 MTDYPIKYRLIKKEKHTGARLGEIITPHGTFPTPMFMPVGTQATVKTQSPEELKEMGSGI ILSNTYHLWLRPGDELIARAGGLHKFMNWDQAILTDSGGFQVYSLADTRNITEEGVTFKN HLNGAKMFLSPEKAISIQNNLGSDIMMSFDECPQFYQPYDYVKKSIERTSRWAERGLKAH RRPHDQGLFGIVQGAGFKDLRRQSASDLVSMDFPGYSIGGLAVGESHKEMNEVLDFTVPM LPENKPRYLMGVGAPDSLIDGVIRGVDMFDCVLPTRIARNGTCMTSEGRLVVKNAAYAED FTPLDHDCDCYTCRNYTRAYIRHLLKADETFGLRLTSYHNLYFLVNLMKKVRQAIMDDNL LEFREDFFERYGYNKSDRNF >gi|304425484|gb|AEEM01000019.1| GENE 295 293641 - 294399 1004 252 aa, chain + ## HITS:1 COG:SPy0201 KEGG:ns NR:ns ## COG: SPy0201 COG5523 # Protein_GI_number: 15674402 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 247 1 252 287 157 38.0 2e-38 MKASETRRKAREFLKTLSGKYQLFIVSIVLAILTVSISYRQAIFTTSNGTEFSITESVPS IIGILSALFLASASYAVLDVIRLKRDHVEVGDNMIVFSNELFGKYVLTAILKWLFLFLWS LIAGVGIFIFAIGITYAAVDDSAAGWVIVIIGLIAMIAGFVLAIMKNYSYSMTTYILYDD VQNGTYEGPRSIIDKSTKLMKGNRWRFFCLQFSFIGWHILTAFTCGLLYFYTLPYTTTAN LFFYEDLLENAE >gi|304425484|gb|AEEM01000019.1| GENE 296 294475 - 294972 660 165 aa, chain - ## HITS:1 COG:SPy0187 KEGG:ns NR:ns ## COG: SPy0187 COG0735 # Protein_GI_number: 15674392 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Streptococcus pyogenes M1 GAS # 1 150 1 150 155 238 75.0 5e-63 MDVHTHHRPLDAYENVIEHLKKKHIRITETRKAIIAYIINSHEHPSADKIYRDLLPEHPN MSLATVYNNMKVLVDEGFVAELKVTNDTTTYYDFMGHQHINIVCKNCGEIADFMDVDAID IGKEAYEQTGYQITKIQLTAYGICPKCQEKLKAAGESFMTYYEDK >gi|304425484|gb|AEEM01000019.1| GENE 297 295243 - 295779 764 178 aa, chain + ## HITS:1 COG:L193734 KEGG:ns NR:ns ## COG: L193734 COG3479 # Protein_GI_number: 15673912 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phenolic acid decarboxylase # Organism: Lactococcus lactis # 3 177 2 176 177 281 76.0 5e-76 MTKTFKTLDDFLGTHFIYTYDNGWEYEWYAKNDHTVDYRIHGGMVAGRWVKDQEANIVML TEGVYKVAWTEPTGTDVALDFVPNEKKLNGTIFFPAWVHEHPEITVCFQNEHIDLMEESR EKYATYPKLVVPEFAHITYMGDAGQNNEDVISEAPYEGLPDDIRNGKYFDDNYKRLKK >gi|304425484|gb|AEEM01000019.1| GENE 298 295844 - 296398 576 184 aa, chain + ## HITS:1 COG:L9255 KEGG:ns NR:ns ## COG: L9255 COG1695 # Protein_GI_number: 15673931 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 7 176 7 176 179 103 34.0 2e-22 MPKERLLPYIILGIVKHSSPITGQAITKQFDNEIGEFWRASHSQIYPELKRMSNDNWLKQ TTSEDNAKEKYYQLTSEGEAILSNWLEETVEEAPIQKDLFSLKMFFIHDQANPRILSLLE EERQILLEQLAHFKMREKLLFSSSKDINHAYGHYLILSRAISRVSSQLSWIEDTIQQWQK HHKN >gi|304425484|gb|AEEM01000019.1| GENE 299 296436 - 296858 503 140 aa, chain - ## HITS:1 COG:L158834 KEGG:ns NR:ns ## COG: L158834 COG1832 # Protein_GI_number: 15672137 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Lactococcus lactis # 1 137 1 137 145 188 64.0 2e-48 MTTFQNPSQDVIADYLKNAKTIAVVGLSHRENSPAYGVSKIMQEAGYTIIPVNPRLAGQK ILNETAYARLQDVPVHIDIVDVFRRSEFLPEVAKDFIETDADIFWAQLGLESQEAADILQ AAGRDKIVMNKCIKIEYQGL >gi|304425484|gb|AEEM01000019.1| GENE 300 297227 - 299863 2927 878 aa, chain - ## HITS:1 COG:SPy0185_2 KEGG:ns NR:ns ## COG: SPy0185_2 COG0749 # Protein_GI_number: 15674390 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Streptococcus pyogenes M1 GAS # 322 878 1 557 557 840 76.0 0 MENKKKLLLIDGSSVAYRAFFALYNQIDRFKNRAGLHTNAIYGFHLMLNHLLERVQPTHV LVAFDAGKTTFRTEMYKDYKAGRAKTPDEFREQLPYIREMLSALGITFYDLENYEADDII GTLDKLAENEDEYDVTIVSGDKDLIQLADNNTTVEISKKGVAEFEEFTPAYLMEKMGITP KQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLLEYGSLEGVYENIDGMKKSKMKENLIND KEQAFLSKTLATINISAPITIGLDDINYQGPDLDKLVPFYDEMGFKQFKDNLGAPKKQEK FDVSYAEVDSLSADMFTDDQFFYFEILGDNYHVENIIGFAWGNDKAIYASTNLDLLKDDL FKAALAKPIKTYDFKRSKVLLSHLGVDLPAPAFDSRLAKYLLSTVDDNELSTIARLYTDY VLDSDEAVYGKGVKRAVPKKAVLLSHLARKIVVLNHSEKVMLDKLTEHQQASLLFDMEQP LANVLAKMEIAGISVKKATLQEMEASNQAVIDELTQEIYDLAGMEFNINSPKQLGELLFD KMQLPTSYTKKTKTGYSTAVDVLERLAPISPIVSKILEYRQIAKLQSTYIVGLQDFILQD GKIHTRYLQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPETEDEVLLSSDYSQIEL RVLAHISNDEHLIAAFREGADIHTSTAMRVFGIEKTEDVTPNDRRNAKAVNFGIVYGISD YGLANNLGIPRKVAKQYIETYFERYPGIKNYMERVVRDAKDKGYVETLFHRRRELPDINS RNFNIRQFAERTAINSPIQGSAADILKIAMINLDKALVDGQFKTKMLLQVHDEIILQVPK NELEAVKTLVKETMESAIDLSVPLIADENAGQTWYEAK >gi|304425484|gb|AEEM01000019.1| GENE 301 300248 - 301192 702 314 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 11 307 7 295 301 97 27.0 3e-20 MATFVNSISGVLIILVMVMVGYVLAKKGWFDDQTPSLIAKLVTKVALPCYMIYTIVGRFT ADELLKMLPQLRFPALSMIILLAIAMAVAQLFAVDKKHQGLFVSMFFNSNTIFVGLPINQ ALFGDKSIPYVLVYYMCNTTFFWTIGTYFIQKDGRHSATIDFRDSLRKIFSPPLLGFIIG VILVLLNIQLPAFLLSDFQYLGNLTIPLSMIFIGISVANAGLSRLRFSKDNVLVLLGRFV VAPLLMMVIVSHTQMPLLMKQVFIIQSAMPVMTNAPVVAKLYGADADYAAIMVTESTLLT MLIVPILMYLVNYL >gi|304425484|gb|AEEM01000019.1| GENE 302 301363 - 302385 623 340 aa, chain - ## HITS:1 COG:no KEGG:BCAH187_A5266 NR:ns ## KEGG: BCAH187_A5266 # Name: not_defined # Def: transcriptional regulator, ArsR family # Organism: B.cereus_AH187 # Pathway: not_defined # 1 331 1 358 368 155 28.0 2e-36 MTITINFSEQLVKNIRSLDNNCHSIFSPLSELFCSLHVLLNPEGHGLMTAWAIETRKQMD CKTLAELKYFSPLYRKSVPSFFMEEMITEDCCLEVQLSHLGTSFFNKNVDDLIQELKEFD KTELVRDLQHNKNLVFLKLFSFLREYNDTYFKELVSNSNLINILNHNVKKQMDDIVEKGF VNFISTIDSNQIYWNTGSIKIQTKEDEVYELGCGEKLYFIPSSVTWPHVRINRLREGITI IYDINSQHIGNLSRQAMANTFKILSDPVRIDILVNLNQGKKTTKGLSQILSVSEPTISHH LTLLKDAGLVEKTRDGKRVFYYNTNKVLSLIPNFYNNANR >gi|304425484|gb|AEEM01000019.1| GENE 303 302406 - 303326 376 306 aa, chain - ## HITS:1 COG:BS_yrdR KEGG:ns NR:ns ## COG: BS_yrdR COG0697 # Protein_GI_number: 16079715 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 305 1 304 321 205 40.0 9e-53 MTKNKFLIGFCSCLIAGVMFGAQWPIAGSALHVIDPYWFTLIRYLTVAVVLSIILFLREG KDGFIIAKSQFISIYFLGTMAFCAYNFLVFAGQKMAGTQGTILASLLMALIPMVSILVLW GYKKEFPGFLTLFLILVSLVGVFLVVTKGNLAIFQQEKNLLKPIILIFLSVFAWVFYTIG VSNFPDWSPLKYTTLSCLFGNISSIFVIIILTKMNISNAPSLSDLHSVLGQLFYMSIFSG VIGVLMWNVGNKYLGPQNGSLFMNLVPIVTFLVEVFLGYQISAIEIFGACLTIAAIVINN LARRKI >gi|304425484|gb|AEEM01000019.1| GENE 304 303313 - 304083 399 256 aa, chain - ## HITS:1 COG:L51063 KEGG:ns NR:ns ## COG: L51063 COG1085 # Protein_GI_number: 15672818 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Lactococcus lactis # 3 256 8 260 261 228 43.0 7e-60 MKPLIFNPKIAKEKPDDSSDCPFCQVHKLTNILEQNGTMIWLENKYRTLEETYQTIIIES DDHWGEISNYTYDYNRQLIRYAMEKFSSMQSKKRFRSVAMFKNFGPLSGGSLRHPHLQIV GFESKNIYEALSLESFKGITICTEDVGRAEINISTKPTMGFCEFNIIANQNQIDNFADGI KNVVMYLLKDYFLGNCRSYNLFFFRNSDKVMCKVVPRFVVSPYYVGYKVSQLNDINRLAE VKQEFLTKFRSYYDKK >gi|304425484|gb|AEEM01000019.1| GENE 305 304080 - 304910 425 276 aa, chain - ## HITS:1 COG:no KEGG:Psyr_3066 NR:ns ## KEGG: Psyr_3066 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae_B728a # Pathway: not_defined # 1 269 7 283 285 98 28.0 2e-19 MNFFDLHVHAQPDLYKRRYSVETLEGELRQTDSFAVFKSHTTSTIPLVLENSRVFGSIVL NPYQGGVQLPTILSQYILSNKSFIIWLPTMTGYTQKALKQNLYNSILGKYEFTSRISDNG NLKREVSEILKFASYVDVPVATGHSSKDEVLLLVSEAKKYNTRIIITHPFYRLTDFSIFE LIELSKHPNIYFECSILMNLIGDETIKKDVELITAVGTDRVFISSDLGQINKLSVTEGYQ LYKNNIKKYADISNESCEDIFFNTPKSILFGRRLEL >gi|304425484|gb|AEEM01000019.1| GENE 306 304907 - 305569 320 220 aa, chain - ## HITS:1 COG:RSp1233 KEGG:ns NR:ns ## COG: RSp1233 COG0684 # Protein_GI_number: 17549454 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Ralstonia solanacearum # 4 212 7 213 221 123 39.0 2e-28 MKNELLKELYSFDTACLSDALDSLNIDGGLIGIKPQTRNCDLVGRAFIVNYREASTLDRE KKHPANFIDDVPYGYVPVLANDGRTDCTVWGDILTETAQRKGIPGTIIDGCCRDIKSIKE KKYAMFSKGVYMQSGKGRTVMTGIGESTTIGGVNIDQGDYIRGDENGVVVIPQKYVEKVI ELSKNILVKEDAIKKLVAKGTRLDRARKELNYSHAWEKIE >gi|304425484|gb|AEEM01000019.1| GENE 307 305559 - 306662 731 367 aa, chain - ## HITS:1 COG:MK0782 KEGG:ns NR:ns ## COG: MK0782 COG0473 # Protein_GI_number: 20094219 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Methanopyrus kandleri AV19 # 3 362 4 331 335 210 35.0 3e-54 MKKVAVLPGDGIGKEVIEVCIPIINKLGLDINLIFGSIGWENWVESGNPVPDETWQLISS SDAVLLGAVTSKPKRIALEELKIPIQNDIEYISPVIQLRQKLNLFANVRPIVAYGGDRNY EFYIIRENTEGLYSGLDFKPIPSSLKDFICEKNAKFKKLSVDDAATIRIITESGFDRLLK FSSDWAISHGKKEIVIADKPNVFRNSSELIFNLIEKYSKLYPTLNYRVENVDAVAMWMVR RPEKYEVIVCENQFGDILSDVGAAVMGGLGMAYSGNFGMASLAYFEPVHGSAPKYVGLDK ANPIAMFLTIAMLVEYLGYIKESQSIKKAVRMAVSNCSFRTFDLSGTASQSESAEYIIQQ AVKFNEE >gi|304425484|gb|AEEM01000019.1| GENE 308 306659 - 307429 365 256 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNQKLNNREWLFKIGDGLDKIIVLPRKDGRTVTVEEWQKLYDVLGNKCSIVIIDIPEYLC KFNVQNCKTTSEMADILHKILKKEELNNIKVFIGVSLGGMILQKYLSKYSNIPSVFISTI IEQNLKITTVFNSWKNNLYCLGEQSFNLNLLSWVLKDSTITDIPKCNDGFSAEKELLSLD AILHHGFDSIKNVSSKKSLVMYGKDSPLINMEEASAFTKYFSDLLIYPVSSSGMRVLEDN PKDSYKMLKDFIERYL >gi|304425484|gb|AEEM01000019.1| GENE 309 307392 - 308357 567 321 aa, chain - ## HITS:1 COG:MT3575 KEGG:ns NR:ns ## COG: MT3575 COG0119 # Protein_GI_number: 15843081 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Mycobacterium tuberculosis CDC1551 # 4 242 10 243 334 98 27.0 2e-20 MLKLMDVTLREGEYVDNNFLTPGISRKIVSKLHETGIDYIEIGYLGDSSKNSGPQKCDSA YLDFLTSNAISGWENCFSIMIQPSYFSEDNIEVFNDSRVGMARITVTEENICKVEQIIKI LEKYNVLVSVNVIRSSRYGIEKFSELVKRISQSNADIIYLADSNGAMIPEDVRKLLTISK EIIKKGKRQELGFHAHNHLGLSISNALTAIDFGCTYIDASLLGYGKSSGNLPMEIFIALL DRMECGKKLDVWSILNLSNSIYESVNSSGFFGHTSEGAYIGMKNLNWDEVNKIYAKNNIT SLLNKEAGEFESKTKQSRMAF >gi|304425484|gb|AEEM01000019.1| GENE 310 308683 - 310653 2499 656 aa, chain - ## HITS:1 COG:SP2030 KEGG:ns NR:ns ## COG: SP2030 COG0021 # Protein_GI_number: 15901851 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Streptococcus pneumoniae TIGR4 # 1 656 1 657 658 1000 75.0 0 MSQLSVNAIRFLGIDAIEKAKSGHPGVVMGAAPMAYSLYTKHLHVNPAVPNWINRDRFIL SAGHGSMLLYALLHLSGFDVTIDDLKHFRQWASKTPGHPEYGHTDGVDATSGPLGQGISM AVGLAQAERFLAAKYNKPDFPIFNHYTYVIAGDGDFMEGVSGEASSYAAKQQLNKLIVLY DSNDICLDGETNAAFTENVRARYNAYGWHTAIVEDGTDINAISLAIEEAKASNKPSLIEI KTTIGYGAPTKGGTNAVHGAPLGAEETAATRRHLGWEYPPFDVPEEVYDDFKENVEKRGV AAYQKWLEMLADYKTAYPNEAKEVEAIIRGGDPATLTEADFPVFDDGFSQATRHSSQAAI NAAAAALPNFLGGSADLAHSNMTYINDDGLQDAEHPLNRNIQFGVREFGMATILNGMALH GGLRVFGGTFFVFSDYLKAAMRLSALQGLPVVYVFTHDSIAVGEDGPTHEPIEQLSGLRA IPNLTVLRPADARETQAAWHYALTQKSTPTALVLTRQNLVVEKGTSFTAVEKGAYVVYES GTDFDTILLASGSEINLAVEAAKKLVAQGGKVRVVSVPSTELFDAQSAEYKEMILPNAVR KRVAIEMAATQPWYKYVGLDGKVIGIDTFGASAPASEVIEHYGFTVDNIVNTVNHL Prediction of potential genes in microbial genomes Time: Sun May 29 12:56:55 2011 Seq name: gi|304425399|gb|AEEM01000020.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00030, whole genome shotgun sequence Length of sequence - 88428 bp Number of predicted genes - 86, with homology - 79 Number of transcription units - 48, operones - 22 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 176 236 ## COG0176 Transaldolase - Term 197 - 232 4.4 2 1 Op 2 2/0.154 - CDS 238 - 1329 1050 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 1370 - 1429 3.2 - Term 1459 - 1502 8.0 3 2 Tu 1 . - CDS 1511 - 3169 1308 ## COG3711 Transcriptional antiterminator - Prom 3364 - 3423 3.5 - Term 3350 - 3402 3.2 4 3 Op 1 8/0.000 - CDS 3444 - 4154 988 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 5 3 Op 2 9/0.000 - CDS 4154 - 5017 685 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 6 3 Op 3 8/0.000 - CDS 5021 - 5686 821 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 7 3 Op 4 13/0.000 - CDS 5728 - 6213 543 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 6340 - 6399 3.3 - Term 6233 - 6275 6.7 8 4 Op 1 11/0.000 - CDS 6445 - 6726 422 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 9 4 Op 2 . - CDS 6800 - 8260 1508 ## COG3037 Uncharacterized protein conserved in bacteria - Prom 8299 - 8358 5.7 - Term 8411 - 8458 2.1 10 5 Op 1 . - CDS 8486 - 9043 723 ## GALLO_2128 hypothetical protein 11 5 Op 2 . - CDS 9070 - 10230 1188 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 12 5 Op 3 22/0.000 - CDS 10249 - 11082 1083 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 13 5 Op 4 32/0.000 - CDS 11157 - 11810 509 ## COG2011 ABC-type metal ion transport system, permease component 14 5 Op 5 . - CDS 11807 - 12814 620 ## COG1135 ABC-type metal ion transport system, ATPase component - Term 13107 - 13141 5.3 15 6 Tu 1 . - CDS 13177 - 13293 70 ## - Prom 13330 - 13389 8.5 + Prom 13051 - 13110 5.3 16 7 Op 1 . + CDS 13292 - 13510 84 ## + Prom 13518 - 13577 6.7 17 7 Op 2 . + CDS 13597 - 13998 323 ## COG1959 Predicted transcriptional regulator + Term 14009 - 14045 2.5 - Term 14039 - 14074 4.2 18 8 Tu 1 . - CDS 14175 - 15467 1604 ## COG0104 Adenylosuccinate synthase - Prom 15623 - 15682 10.7 + Prom 15861 - 15920 10.7 19 9 Tu 1 . + CDS 15963 - 18215 2043 ## COG2918 Gamma-glutamylcysteine synthetase + Prom 18248 - 18307 5.5 20 10 Op 1 . + CDS 18338 - 19165 738 ## GALLO_2150 hypothetical protein 21 10 Op 2 . + CDS 19195 - 20472 1567 ## COG3853 Uncharacterized protein involved in tellurite resistance + Term 20539 - 20583 3.5 - Term 20759 - 20799 4.0 22 11 Op 1 . - CDS 20808 - 21206 144 ## GALLO_2152 hypothetical protein 23 11 Op 2 . - CDS 21206 - 21721 484 ## GALLO_2153 hypothetical protein 24 11 Op 3 45/0.000 - CDS 21734 - 22477 256 ## COG0842 ABC-type multidrug transport system, permease component 25 11 Op 4 . - CDS 22470 - 23348 309 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 26 11 Op 5 . - CDS 23326 - 24309 227 ## GALLO_2156 hypothetical protein 27 11 Op 6 . - CDS 24303 - 25118 456 ## COG0778 Nitroreductase 28 11 Op 7 . - CDS 25127 - 26341 653 ## COG1944 Uncharacterized conserved protein 29 11 Op 8 . - CDS 26338 - 27207 467 ## GALLO_2159 hypothetical protein - Prom 27236 - 27295 3.1 - Term 27220 - 27274 6.4 30 12 Tu 1 . - CDS 27304 - 27444 161 ## GALLO_2160 hypothetical protein - Prom 27575 - 27634 5.2 + Prom 27575 - 27634 5.5 31 13 Op 1 2/0.154 + CDS 27731 - 28597 1040 ## COG1281 Disulfide bond chaperones of the HSP33 family 32 13 Op 2 . + CDS 28590 - 29567 459 ## PROTEIN SUPPORTED gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase + Term 29600 - 29638 9.5 - Term 29580 - 29632 16.8 33 14 Op 1 3/0.154 - CDS 29641 - 32082 1730 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 34 14 Op 2 . - CDS 32079 - 32540 303 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 - Prom 32601 - 32660 8.1 35 15 Tu 1 . + CDS 32824 - 32913 105 ## + Term 32992 - 33030 1.0 36 16 Tu 1 . + CDS 33251 - 33715 591 ## COG2426 Predicted membrane protein + Term 33727 - 33763 2.1 - Term 33775 - 33813 0.0 37 17 Op 1 3/0.154 - CDS 33830 - 34690 791 ## COG1396 Predicted transcriptional regulators 38 17 Op 2 . - CDS 34732 - 35928 806 ## COG0477 Permeases of the major facilitator superfamily - Prom 35962 - 36021 9.1 - Term 36084 - 36121 6.4 39 18 Op 1 38/0.000 - CDS 36145 - 37182 457 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Prom 37210 - 37269 3.4 - Term 37215 - 37255 1.1 40 18 Op 2 . - CDS 37293 - 38060 1237 ## PROTEIN SUPPORTED gi|22537971|ref|NP_688822.1| 30S ribosomal protein S2 - Prom 38134 - 38193 2.1 - TRNA 38376 - 38446 60.1 # Cys GCA 0 0 + Prom 38489 - 38548 6.2 41 19 Tu 1 . + CDS 38585 - 39538 969 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF + Prom 39549 - 39608 5.1 42 20 Tu 1 . + CDS 39649 - 39711 143 ## + Term 39765 - 39811 2.4 - Term 39756 - 39796 2.1 43 21 Tu 1 . - CDS 39808 - 40674 967 ## COG1396 Predicted transcriptional regulators - Prom 40875 - 40934 5.7 - Term 40968 - 41005 5.5 44 22 Tu 1 . - CDS 41022 - 42917 2388 ## COG3590 Predicted metalloendopeptidase - Prom 42939 - 42998 6.8 + Prom 42884 - 42943 9.8 45 23 Tu 1 . + CDS 43053 - 44033 1165 ## COG0673 Predicted dehydrogenases and related proteins + Term 44046 - 44083 7.1 46 24 Op 1 9/0.000 - CDS 44431 - 46062 1598 ## COG0366 Glycosidases 47 24 Op 2 . - CDS 46077 - 48050 2403 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 48109 - 48168 4.8 + Prom 48150 - 48209 5.9 48 25 Tu 1 . + CDS 48246 - 48959 676 ## COG2188 Transcriptional regulators - Term 49209 - 49258 11.3 49 26 Op 1 . - CDS 49260 - 50087 803 ## COG3764 Sortase (surface protein transpeptidase) - Prom 50206 - 50265 2.5 - Term 50160 - 50203 1.0 50 26 Op 2 . - CDS 50275 - 51717 1705 ## GALLO_2178 putative peptidoglycan linked protein (fimbrial structural unit) (LPXTG motif) - Prom 51763 - 51822 5.4 51 27 Tu 1 . - CDS 51824 - 53800 1748 ## GALLO_2179 putative collagen-binding protein Cne precursor ((FPXTG motif protein) + Prom 54100 - 54159 8.9 52 28 Tu 1 . + CDS 54302 - 54904 424 ## COG1309 Transcriptional regulator + Term 54954 - 54987 1.1 - Term 55832 - 55869 -0.9 53 29 Tu 1 . - CDS 55873 - 56844 1404 ## COG2255 Holliday junction resolvasome, helicase subunit - Prom 56930 - 56989 6.8 54 30 Op 1 2/0.154 - CDS 57369 - 57983 671 ## COG0602 Organic radical activating enzymes 55 30 Op 2 . - CDS 58025 - 58531 259 ## PROTEIN SUPPORTED gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 56 30 Op 3 . - CDS 58543 - 58689 199 ## - Prom 58797 - 58856 4.7 - Term 58812 - 58855 2.1 57 31 Tu 1 . - CDS 58929 - 61145 2584 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 61165 - 61224 8.9 - Term 61181 - 61236 11.1 58 32 Op 1 . - CDS 61247 - 62836 1496 ## GALLO_2186 hypothetical protein 59 32 Op 2 . - CDS 62879 - 63007 61 ## - Term 63032 - 63082 10.5 60 33 Op 1 7/0.000 - CDS 63099 - 63416 503 ## COG3906 Uncharacterized protein conserved in bacteria 61 33 Op 2 6/0.000 - CDS 63449 - 63859 487 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 62 33 Op 3 1/0.231 - CDS 63865 - 64134 397 ## COG4472 Uncharacterized protein conserved in bacteria - Prom 64164 - 64223 8.5 - Term 64416 - 64442 -0.6 63 34 Tu 1 . - CDS 64457 - 64855 449 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 64970 - 65029 8.3 - Term 65069 - 65110 6.3 64 35 Op 1 5/0.000 - CDS 65125 - 66279 1715 ## COG0468 RecA/RadA recombinase 65 35 Op 2 . - CDS 66329 - 67588 209 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Prom 67614 - 67673 4.4 66 36 Tu 1 . - CDS 67720 - 68910 635 ## COG0477 Permeases of the major facilitator superfamily - Prom 68942 - 69001 5.7 67 37 Op 1 . - CDS 69070 - 69243 109 ## - Term 69249 - 69285 1.5 68 37 Op 2 . - CDS 69293 - 69757 667 ## GALLO_2194 hypothetical secreted protein 69 37 Op 3 . - CDS 69827 - 70234 347 ## GALLO_2195 hypothetical protein - Prom 70410 - 70469 5.5 + Prom 70281 - 70340 9.8 70 38 Tu 1 . + CDS 70397 - 71251 686 ## COG1396 Predicted transcriptional regulators + Term 71263 - 71302 4.6 - Term 71251 - 71290 8.4 71 39 Op 1 1/0.231 - CDS 71325 - 71918 757 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 72 39 Op 2 6/0.000 - CDS 71920 - 73863 1531 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) - Prom 73919 - 73978 5.4 - Term 73936 - 73973 4.8 73 40 Op 1 3/0.154 - CDS 73980 - 76550 2855 ## COG0249 Mismatch repair ATPase (MutS family) 74 40 Op 2 1/0.231 - CDS 76537 - 76893 227 ## COG4550 Predicted membrane protein 75 40 Op 3 . - CDS 76890 - 77327 593 ## COG1438 Arginine repressor - Prom 77354 - 77413 10.6 + Prom 77436 - 77495 7.9 76 41 Tu 1 . + CDS 77518 - 79209 2427 ## COG0018 Arginyl-tRNA synthetase + Term 79221 - 79278 6.2 + Prom 79239 - 79298 6.4 77 42 Tu 1 . + CDS 79322 - 79615 408 ## GALLO_2203 hypothetical bacteriocin + Term 79622 - 79650 -1.0 - Term 79608 - 79636 -1.0 78 43 Tu 1 . - CDS 79656 - 81161 1794 ## COG4099 Predicted peptidase - Prom 81365 - 81424 7.3 - Term 81443 - 81492 10.1 79 44 Op 1 2/0.154 - CDS 81501 - 82373 1032 ## COG1284 Uncharacterized conserved protein - Prom 82395 - 82454 2.0 - Term 82421 - 82456 3.5 80 44 Op 2 3/0.154 - CDS 82457 - 83395 894 ## COG1284 Uncharacterized conserved protein 81 44 Op 3 . - CDS 83388 - 85136 2385 ## COG0173 Aspartyl-tRNA synthetase - Prom 85242 - 85301 5.4 - Term 85189 - 85216 -0.1 82 45 Tu 1 . - CDS 85315 - 85815 405 ## COG1396 Predicted transcriptional regulators - Prom 85855 - 85914 8.1 83 46 Tu 1 . - CDS 85987 - 87264 1401 ## COG0124 Histidyl-tRNA synthetase + Prom 87474 - 87533 7.8 84 47 Op 1 3/0.154 + CDS 87581 - 87757 300 ## PROTEIN SUPPORTED gi|171778547|ref|ZP_02919674.1| hypothetical protein STRINF_00526 85 47 Op 2 . + CDS 87773 - 87922 251 ## PROTEIN SUPPORTED gi|55821942|ref|YP_140384.1| 50S ribosomal protein L33 + Term 87938 - 87974 0.0 + Prom 88007 - 88066 8.9 86 48 Tu 1 . + CDS 88087 - 88398 401 ## GALLO_2223 hypothetical protein Predicted protein(s) >gi|304425399|gb|AEEM01000020.1| GENE 1 2 - 176 236 58 aa, chain - ## HITS:1 COG:SPy1678 KEGG:ns NR:ns ## COG: SPy1678 COG0176 # Protein_GI_number: 15675540 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Streptococcus pyogenes M1 GAS # 1 58 1 58 214 102 91.0 2e-22 MKFFLDTADVSAIKTINELGVVDGVTTNPTIISREGRDFETVIKEICQIVDGPVSAEV >gi|304425399|gb|AEEM01000020.1| GENE 2 238 - 1329 1050 363 aa, chain - ## HITS:1 COG:SPy0182 KEGG:ns NR:ns ## COG: SPy0182 COG2220 # Protein_GI_number: 15674387 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Streptococcus pyogenes M1 GAS # 1 363 1 363 363 676 85.0 0 MANVKDITRESWILNTFPEWGTWLNEEIEEEVVPENNFAMWWLGNCGVWIKTPGGANIVM DLWSNRGKSTKKVKDMVWGHQMANMAGVRKLQPNLRVQPMVIDPFAINELDYYLVSHFHS DHIDINTAAAIVNNPKLDHVKFVGPYECGEIWKKWGVPEERIIIIKPGESFEFKDVKVTA VESFDRTCLVTLPVDGAKENNDSLKGLAVTDEEMARKAVNYIFETPGGTIYHGADSHFSN YFAKHGKDFDIDVAINNYGDNPIGIQDKMTSIDLLRMAENLRAKVIIPVHYDIWSNFMAS TDEILALWKMRKERLQYQFHPFIWEVGGKYVYPQDKDRIEYHHPRGFDDAFEHDSNIQFK ALL >gi|304425399|gb|AEEM01000020.1| GENE 3 1511 - 3169 1308 552 aa, chain - ## HITS:1 COG:SPy0181 KEGG:ns NR:ns ## COG: SPy0181 COG3711 # Protein_GI_number: 15674386 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pyogenes M1 GAS # 1 547 2 547 547 530 50.0 1e-150 MLDKKSYDLLSYLLTLTEPETVTTISKVLNQSRRRIYYHLDKINDALPEEIEKIIPYPRI GILLNDEQRQACRIMMGELDGYSYVMSVEERLELSLLYIAVSKERVTIDKLMRLTDVSRN TILNDLNDIRQKLSDEEYDIRLRVSKARGYYLACHPLSKIQFLYRLLYRVYTKDNEKFIA IIRKRIINLPEVMPYFSDDINDYLYTELSTIEERLGKRLNPKDLNFMVKILPYLLLSYHS IDFTAEEKERARRDFSLAWERLEYQMAINIAKNLREKFNLSLDSIEIGLIAMLLLSFRKT LDLHLESTDYDDMRETLQLFLDTLQTKYHLSFRHPNDLLDQLLTHCKALLYRKTYGILSE NPLTEDIKIKYGQLFNMTKSCIYILEEAWLIQMTDDDIAYFVIHLGGEIENHDVSDSQKN HVVLVCDEGVGIQKLLVSQCKKCLENCEIDAIFTLEQFYSVSDIITSNMVISTSDNVETT LPLLVVHPILTDEDIIKMLHFIRTKGRQKEIHYDQQLDKLLKIYVPDCNERYGLKNQIEK IIRQEFIDTSLN >gi|304425399|gb|AEEM01000020.1| GENE 4 3444 - 4154 988 236 aa, chain - ## HITS:1 COG:SPy0179 KEGG:ns NR:ns ## COG: SPy0179 COG0235 # Protein_GI_number: 15674384 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Streptococcus pyogenes M1 GAS # 5 232 7 234 234 347 73.0 2e-95 MLVPELRQRVYKANMDLPVHGLVKFTWGNVSAIDREKGLIVIKPSGVPYEELSPENMVVS DLEGNVVEGDLNPSSDLPTHVELYKAFAEVGGIVHTHSTEGVAWAQAGRDIPCYGTTHAD TFYGAIPCARALTPEEINGAYEKETGKVIIEEFQKRSLDPMAVAGVTVRNHGPFAWGKDE QAAVYNAVVLEEAARMARYTEGINPDVKEVTQALKDKHYLRKHGKNAYYGQKSLTH >gi|304425399|gb|AEEM01000020.1| GENE 5 4154 - 5017 685 287 aa, chain - ## HITS:1 COG:SPy0178 KEGG:ns NR:ns ## COG: SPy0178 COG3623 # Protein_GI_number: 15674383 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 286 287 533 88.0 1e-151 MARPIGIYEKATPKNFTWRERLAFAKELGFDFVEMSVDESDSRLARLDWTKKERLDVVQA IYETGIRIPSICFSGHRRYPLGSNDPKTEATSLEMMKKCIELAQDLGVRTIQLAGYDVYY EEKSPETRARFIKNLRKACDWAEEAQVILAIEIMDDPFINSIEKYLAVEKEIDSPYLFVY PDTGNVSAWHNDLWSEFYNGHKSIAALHLKDTYAVTENSKGQFRDVPFGDGCVDWEAMFA ILKKTNYNGPFLIEMWSENCATVEETKQAIQVAKDFLLPKIEKAGLR >gi|304425399|gb|AEEM01000020.1| GENE 6 5021 - 5686 821 221 aa, chain - ## HITS:1 COG:SP2035 KEGG:ns NR:ns ## COG: SP2035 COG0269 # Protein_GI_number: 15901856 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 221 1 221 221 385 88.0 1e-107 MTKQLPNLQVALDHSDLKGAIAAAVSVGNEVDIIEAGTVCLLQVGSELVEVLRNLFPDKW IVADTKCADAGGTVAKNNAIRGADWMTCICCATIPTMKAARKAIEEVRGERGEIQVELYG DWTYEQAQQWLDAGISQVIYHQSRDALLAGETWGEKDLNKVKKLIDMGFRVSVTGGLSVD TLKLFAGVDVFTFIAGRGITEAADPAAAARDFKNEIKRIWG >gi|304425399|gb|AEEM01000020.1| GENE 7 5728 - 6213 543 161 aa, chain - ## HITS:1 COG:SP2036 KEGG:ns NR:ns ## COG: SP2036 COG1762 # Protein_GI_number: 15901857 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 1 161 1 161 161 254 83.0 6e-68 MNLKQALIDNDSIRLGVTASDWKEAVKLAVEPLVESGAVKAEYYDAIIASTAQYGPYYIL MPGMAMPHARPEAGVQRDAFSLITLTHSVKFQDGKEVSVLLALAATSSKIHTSVAIPQII ALFELENSVERLQSCQTKEEVLAMIDKSKDSPYLEGLDLES >gi|304425399|gb|AEEM01000020.1| GENE 8 6445 - 6726 422 93 aa, chain - ## HITS:1 COG:SPy0175 KEGG:ns NR:ns ## COG: SPy0175 COG3414 # Protein_GI_number: 15674380 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Streptococcus pyogenes M1 GAS # 1 92 1 92 92 143 88.0 9e-35 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSNIESASCSVGEAKGLAANYDIVVASNHL IHELDGRTDGKLIGLDNLMDDNEIKTKLEAALK >gi|304425399|gb|AEEM01000020.1| GENE 9 6800 - 8260 1508 486 aa, chain - ## HITS:1 COG:SP2038 KEGG:ns NR:ns ## COG: SP2038 COG3037 # Protein_GI_number: 15901859 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 485 1 484 485 723 80.0 0 MDFLLSILNWFSQNILQKPAFFVGILVLIGYILLKKPWYDVFAGFVKATVGYMILNVASA GLVSTFRPILAALNYRFNIGAAVIDPYFGLTAANNYIMDNFPKFVGTATTALLIGFFLNI FLVAFRKITKVRTLFITGHIMVQQAATVTLMIILLIPSFRNQFWGTLAVGIVCGLYWAVS SNMTVEPTQRLTGGGGFAIGHQQQFAIWFVDKIAPKIGKKEENLDNLKLPTFLNIFHDTV VASATLMLVFFGAILYILGPDIMSNADVITSGTVYNPASQSFFMYVIETSFTFSVYLFIL MQGVRMFVAELTNAFQGISSKLLPGSFPAVDVAASFGFGSPSAVLFGFATGLIGQLITIL LLIIFKNPVLIITGFVPVFFDNAAIAVYADKRGGWKAAVVLSFLSGVIQVALGAVAVSLL NLGAYGGYHGNIDFEIPWVPFAYLFKYAGVIGYAIVCLFLLAIPQIQFARAKDKEAYYAG QVQSEE >gi|304425399|gb|AEEM01000020.1| GENE 10 8486 - 9043 723 185 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2128 NR:ns ## KEGG: GALLO_2128 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 185 1 185 185 366 100.0 1e-100 MARIKLVELEETTGAEKERYDELAGRNAVTNMKKGLLNDAATYDAYMGWYTSWQRLVEVV GEKDAILYAHAISTTNSCQLCSLFFISDVKGLGLDPANLNYDEREEVLTELGRSIVKDPT AVSDELFEKLRTFFDDKEIVVIVGFAGQMIATNNFNSVLQIDVDKRLLPIIDEFKPATWR DNLKK >gi|304425399|gb|AEEM01000020.1| GENE 11 9070 - 10230 1188 386 aa, chain - ## HITS:1 COG:FN1415 KEGG:ns NR:ns ## COG: FN1415 COG1979 # Protein_GI_number: 19704747 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Fusobacterium nucleatum # 1 385 1 384 385 264 39.0 3e-70 MIGFEYYNPAKIVFGEDSEQQLTALLKENKVNSLLLVYSGDFIKDLGIYAVIEKAVKELG IAFSENGNVVPNPEVDLVRQLVEQGKKDKVDFVLAVGGGSSIDTAKAVALGIPYDGDVWD FFDKGISPKEVLNIGVIATTASSGSETSNASIISNGEWKLGFEDDRIIPKFAIMNPKYTA GLPLYQTAVGIADVLAHLLERYFSDTQHSDVTDYLIEGGIRALLLNADRLLDDLSDINAR AEIQWLASVAHNNFLDAGRSADWGSHRIEHELSAQYHIVHGEGMAVVLLAWIRYVAERKP WRPALLASRVFGVDAHDYDEKERALILAEKLEAFFKSLELKTTLTELGIDDKDFEIMAKR ATRNGSVGHYELLDADSIQEILKLAL >gi|304425399|gb|AEEM01000020.1| GENE 12 10249 - 11082 1083 277 aa, chain - ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 9 275 4 258 260 216 46.0 4e-56 MKKKVLSLIVTGFVATILTGCGASQAATSSSTSDSNTVIKVGANITPHAEILEEAKPILA KKGITLEIVKLEDSITPNTGVIEGSLDANYFQHVPYLEQFNKENDSDLVSIGAIHYEPFG IYAGRVTKLSSLPDGALVAVPNNVTNEARALLLLAQEGIITLNDDAGVNATVEDITDNPK NIQFKELAPEQLVSALPDVDIAVINGNYAIEGGLKVSDALAVESNDGLAAKTYANIIATS PDKKDDEALKTLVEVLQSSEIKSFIEETYDGAVVPLD >gi|304425399|gb|AEEM01000020.1| GENE 13 11157 - 11810 509 217 aa, chain - ## HITS:1 COG:FN0659 KEGG:ns NR:ns ## COG: FN0659 COG2011 # Protein_GI_number: 19703994 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Fusobacterium nucleatum # 5 216 18 229 233 162 44.0 6e-40 MSQYIIEAIQVGILETLEMTFFSALIAYLIGLPLGIILYATARGRLLENRIINLVLGVIV NILRSLPFLILLVLLIPFTRLVTGSSIGTIASIVPLTIGTIPIVARMVEASLCEVQPGII EAATAMGASPFYIILHFILPEATPSLLQGAAINVATVLGYSAMAGVIGGGGLGAIALQYG YYRYQKDVLWSTVALLVIMVMIIQEVGNLIAKKKRKS >gi|304425399|gb|AEEM01000020.1| GENE 14 11807 - 12814 620 335 aa, chain - ## HITS:1 COG:SA0769 KEGG:ns NR:ns ## COG: SA0769 COG1135 # Protein_GI_number: 15926497 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Staphylococcus aureus N315 # 5 309 1 314 341 270 47.0 4e-72 MVKNVFELENISKTYKNDGKEFVALEDVSLSIREGEIFGIIGMSGAGKSTLVRTLNRLEE VSAGTVKFYGNDLASLKTGELRNVRHSISMIFQSFNLLQQRTVIQNVEQPLRIAGVDKVK RREIAEEMLAIVGLSDKKNAYPERLSGGQKQRVAIARALAADPKVLLCDEATSALDPKIT GEILELLKEINEKRKLTIVIITHEMSVVEKICDRVAIIDNGKLAEIGEVKEVFRAPQSKV ARKLVFPTNPFDPSNPNGRLVRIVFDGLAASEPFIANLVETTGKKVNILSANTKSVGGIG YGQMVLELPPEVGDQEVIIDFLKKNGLSLSEVVRE >gi|304425399|gb|AEEM01000020.1| GENE 15 13177 - 13293 70 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNITIVKQTVMCCRMQNSQAYYLTGAFDCVSVRPDTV >gi|304425399|gb|AEEM01000020.1| GENE 16 13292 - 13510 84 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSESSSKNFSEIIEIIITPFTYYVNGFFRKILNFLFIIIKQIHFKAKIYNFLTPFYQLAL PLVYKLSKNINF >gi|304425399|gb|AEEM01000020.1| GENE 17 13597 - 13998 323 133 aa, chain + ## HITS:1 COG:PA3815 KEGG:ns NR:ns ## COG: PA3815 COG1959 # Protein_GI_number: 15599010 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 132 3 131 163 82 32.0 2e-16 MISTRGRYAIRVMIDLVENNNGHYIPLKDIAKRQEISKKYLEIIVKEMVAGELLIGASGR GGGYKLRRKPEEYTVGEILDLMEGTLSSVACLADKSFDCPRKDKCKTLPMWTEYDNLVHD FFYGKTILDLVNN >gi|304425399|gb|AEEM01000020.1| GENE 18 14175 - 15467 1604 430 aa, chain - ## HITS:1 COG:SPy0160 KEGG:ns NR:ns ## COG: SPy0160 COG0104 # Protein_GI_number: 15674367 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 430 1 430 430 806 91.0 0 MTSVVVVGTQWGDEGKGKITDFLSQDAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIF FPEKISVIGNGVVVNPKSLVTELKYLHDEGITTDSLRISDRAHVILPYHIKLDRLQESSK GDNKIGTTNKGIGPAYMDKAARVGIRIADLLDKEIFAERLRVNLEEKNRLFEKMYECEPI KFEDIFEEYYEYGQQIKDYVTDTSVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSS NPVAGGVTIGSGVGPSKINKVVGVCKAYTSRVGDGPFPTELLDEVGDRIREVGHEYGTTT GRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGERIDHYPASL EQLKRCKPIYEELPGWSEDITGCRSLDELPENARNYVRRVGELVGVRISTFSVGPDRDQT NILESVWANI >gi|304425399|gb|AEEM01000020.1| GENE 19 15963 - 18215 2043 750 aa, chain + ## HITS:1 COG:PM1048_1 KEGG:ns NR:ns ## COG: PM1048_1 COG2918 # Protein_GI_number: 15602913 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Pasteurella multocida # 1 476 1 481 481 397 44.0 1e-110 MKLNGLLQKSPATLPILQATFGLERESLRISKTNHRVAQTKHPKCLGSRSFHPYIQTDYS EPQVELITPIANSTSEALRFLGAITDVIGRSINKDEYLWPLSMPPKLSADEIAIASLEDD WERQYRDHLAKVYGKILQSMSGIHYNMELGTDLVTALFEESDYTSLITFKNDLYLKLAQN FLRFRWLLTYLYGASPIAEQGFLDKPLDKPVRSLRNSHLGYVNHDDIQVSYQSLERYISD IEHYVNSGQLIAEKEFYSAVRLRGSKHNRDYLEKGITYLEFRCFDINPFDNRGITQETLD TVHLFALALLWLDDSFAIDQDIADAKALNDRIALSHPLEKLPQEAPADLILSAMQAVVEH FDLPEHYHTLLENVKAQIERPELTIGGRLVTEIDHLSLETFGQEKGQAYHDYAWHAHYAL KGYENMELSTQLLLFDAIQKGVNVNILDENDQFLKLWHGDHVEYVKNANMTAKDNYITPL VMENKVVTKKLLAQAGFPVPAGQEFADKDTALRYFSQVKDKAIVVKPKSTNYGLGISIFK EPADLASYQSALDIAFAEDDTILVEEFISGTEYRFFVLDGKCEAVLLRIAANVVGDGTHT IAELVDLKNQNPLRGYNHRSPLEIIELGDIERLMLEQQGYTPDDILPEGVKVDLRRNSNI STGGDSIDVTETMNKSYQQLAAQMASAIGAWVCGVDLIIPDENLNASKEEPNCSCIELNF NPAMYMHTYCHAGKGQALTPKILAKLFPEI >gi|304425399|gb|AEEM01000020.1| GENE 20 18338 - 19165 738 275 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2150 NR:ns ## KEGG: GALLO_2150 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 275 1 275 275 453 100.0 1e-126 MPRYGRPPRGGNGIFTAIIGVIILIALLESLLEIILPIVLIAGVGYGVYYLATKQTRLEK VNTEQRLQDLKDSIRLADRQVKLLDNYLDEKDYTQYVVVARQLLPKIRNIKTEVTDLKSK MDLKISKRILQKAESVEEDILLQLEKLDVSPTTPQASGEEKELLQYAPELTKLYNNIQKD HLTILEKIENADNKEELTALHEADMERFRDILEGYLKIKKSPKDYYNAEERLAQAKTAME KFDLALDETLRKLNESDLKDFDISLRMMADDDTNL >gi|304425399|gb|AEEM01000020.1| GENE 21 19195 - 20472 1567 425 aa, chain + ## HITS:1 COG:SPy0158 KEGG:ns NR:ns ## COG: SPy0158 COG3853 # Protein_GI_number: 15674365 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tellurite resistance # Organism: Streptococcus pyogenes M1 GAS # 1 417 1 416 420 551 79.0 1e-157 MADTFNFDIDKIAENAIIKTDKTTEIIVSSDTSSTGQVSFYDKLSPEQQSAITAKAPALV DNFVADQNALLDFGTSAVEEVNTTVNRILSEQKKLEIPQVDELLKNTNRELNGFIAKYKD AKPAELEKKPNFLQKLFKQGKDTLQEFYFDSQNIEQKMDGMAAAVVKQEETLARNIVSAE MLIEDNNKSIENLVGVIAFIEAAQTEGANRANQLQNEIATLDSATPEYQTKSDELARMTE VINTLEQQHTEYLSRLYVAWTTTPQMRNMVKVSSDMRQKLGMLRRNTIPTMKLSIAQLGI LQQSVKSGVTADAIVNANNAALQMLAETSKEAIPMLERTAQSPTVSIQSVTALAESLVEQ NNGIIAAIDNGRKQRAQLEAAVVKSAETINDSVKIRDQKIVEALLNEGKESQEKVEKKDV TPEND >gi|304425399|gb|AEEM01000020.1| GENE 22 20808 - 21206 144 132 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2152 NR:ns ## KEGG: GALLO_2152 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 132 1 132 132 204 100.0 7e-52 MSKVLRKIAIIICVGAIYNLYFAILNGSDRLIFNFISFLIIAYIELVILDALFYTSLIFQ RNGYLQIITIFLLSSVCEILYAEINGADLRASIDLVILGIPLTVFGLVAWKCYLTKVNNL LIRKKNSFKEQL >gi|304425399|gb|AEEM01000020.1| GENE 23 21206 - 21721 484 171 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2153 NR:ns ## KEGG: GALLO_2153 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 171 1 171 171 312 100.0 3e-84 MEIKKYFGDILELKKRLAAWKDLPLSVVIDEKSPKDISLIFGNYSDKEVIDFFETNFHPS YRHIIGYKQEDGYGDILVKCDYKSILYFEGIGDKVYAYSSDMTVLLKNRLYEVEEFSRFY VRISKSFVVNILAVEKILPALNGKILIALSDGQELVVTRKYKKQFLEYLEA >gi|304425399|gb|AEEM01000020.1| GENE 24 21734 - 22477 256 247 aa, chain - ## HITS:1 COG:BS_yvfS KEGG:ns NR:ns ## COG: BS_yvfS COG0842 # Protein_GI_number: 16080461 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Bacillus subtilis # 12 245 9 243 245 103 27.0 3e-22 MNDVRNMIFLILLDIKRVFRDIKYVFFIIALPILFYIVYTAIFPNNANVNGVPWSEYCLI SMISFGIMGNAINLLGTKVADERGKKWYTYIRVSPVNYFYYGLSHIFSYLTISLFFTFLM FVLAFFYKDINLGLVLSLKIGLVLNLASVVFLMLALLIGRLGSLSQPIGTILYLMLSFLG GLWMPVAAMPKFLSHLAVLLPSYNYAKLGWCLLAHKRLAFNSVGNLLAYFVIFTLLYVYL QKREQMN >gi|304425399|gb|AEEM01000020.1| GENE 25 22470 - 23348 309 292 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 24 290 19 303 311 123 31 3e-27 MEGIVVSEELFRLTRIKKSFGEKKVLKGVDLTVNKGDIVGFLGLNGEGKSTLTKILLGLI TQDEGEVIRNFNVKKDAGVMLQEISVPERMKVIEWIDMIRRFSNSSKTSEEILEAVNLSN ERHKYCNALSGGQQRRAQFATAIASNPKILILDEPTVGMDIVSKRAFWDTLINFSFESDL TIILISHDLEEVSEFCNRIVVLDKGFIKLDHKMVDINKQLQNNSLYSLEKSSITEKQLEA MNHLIFKYENDELLFTDSDIDTVVFDNHISVRLLNKKQKTLRELFMEVLENE >gi|304425399|gb|AEEM01000020.1| GENE 26 23326 - 24309 227 327 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2156 NR:ns ## KEGG: GALLO_2156 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 327 1 327 327 611 100.0 1e-173 MVEMYSLKRGTLFPYNTLYFIFQTTPSFGQKQFHCIEHMVMREIINLYPFLDSKLRAVTT CDYIKFQCFDKTFNLDQLSDFINSQKWLTESGFKLALSEIKQEDALSNQTSGALLETIKG KKENYELTFLEFYDAFQLINNFSYLLCSEGVSSSSNFRKNFLINKDSKRETHVDKGIVPY NGVNFFYRYMMIPMTEFPNLSSIYFLQDFTNTINQKMHKFRNLGIYYSFCFCKYYKKYVE LYIVVSENQLIKNFESKVAKYLEEIYRGYDYIPIRIGTNSKILEFKEDLVALYLSDEFAK TSEPLYNQTQKDFIKKIICLLGGNCGK >gi|304425399|gb|AEEM01000020.1| GENE 27 24303 - 25118 456 271 aa, chain - ## HITS:1 COG:PAB1763 KEGG:ns NR:ns ## COG: PAB1763 COG0778 # Protein_GI_number: 14521107 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pyrococcus abyssi # 74 251 9 183 196 95 34.0 1e-19 MENFKFTMISNHYAQKISQNNKLLQLFHQNTKHSKKYLLRNMFQSRVLLNNPNFLKASSF VEKQYPLFPKITLKKRTDDTLMRSLYYRRSQVKIPIKSSALTEKIVSDLFWAGYGVNFKG TRVTPSGGALYPLELYGLILEDCGKIKRGLYHYRPSLNAIELISDDEKVFDIGSYIMMLQ NLENPSVIFFTTAIFNRMTFKYDARAYRYLLLEAGAMAQNISLVATKYNLVSTFIGGTDD FKVEKVLGIDGVNESLVNCLFITKDGSWGTW >gi|304425399|gb|AEEM01000020.1| GENE 28 25127 - 26341 653 404 aa, chain - ## HITS:1 COG:MJ1094 KEGG:ns NR:ns ## COG: MJ1094 COG1944 # Protein_GI_number: 15669282 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanococcus jannaschii # 53 223 67 235 385 59 27.0 9e-09 MTVTKADNSIFVDEKYGLIKNIYNLPTFAGLPRIHVKMAFGGNYFTAGFNASGAGVTAQA AENSAIGEYIERYSCLHPREKINYSDVLNQIAPTVFNPNADSCIEHYQWMKAIDCIHNSE VGVPVDSVYLTYRSNDKAWITTSTGAACGENLNQCLWKGIAEILERDAFQYIWRRQLPCR RILIEENETLKNFFNKYIKSPYINFKLYQMEMDWEVPAIFGIASFPNGGCVVGASVRKTW LEACEKTLIELSQSIIGYAALILDSKRENFEDYSKIKEYQDHSLLYISDNMTKHLAFLDN GGTFKIPNEHKSDDDKKIAEFFINAVKRIGKAVYFVDVTSCELRSFKWLVGKTLIPNMLD IEPNFIEILKSERLEEIDQNLILQGKRTAEELHNPQPLVPHPFP >gi|304425399|gb|AEEM01000020.1| GENE 29 26338 - 27207 467 289 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2159 NR:ns ## KEGG: GALLO_2159 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 289 1 289 289 541 100.0 1e-152 MRSDINYIVDKNNKIYVKDKSNIYEFKNISDTLFIKYWNEIQEGNFTIDNQKSPLKSQLL NFLNSIKAFSEPETFEEQLKDMGLGKKQSSFSDYTIGICGESDLVDIYLNHFPSRFKKLE IGSDDSEKYDFGLIIGREDNTKHYLELNEIMFEKGIPYNSLLFSKFEVIVGPYTIPNQTS CLKCMRLHELDNNFYGHILSKFTAISDRNEEVITSEILNLGFSFLEAQVVKQILNSQEVA IEIENVQKVLSYQFLEGMWEEHYLLKHPECELCFPASEQNEQIFEVNLK >gi|304425399|gb|AEEM01000020.1| GENE 30 27304 - 27444 161 46 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2160 NR:ns ## KEGG: GALLO_2160 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 36 1 36 46 70 100.0 1e-11 MEQLELNDYQKVGLEVQKLDTDDFLASDQMNWSVTLCCCPCCCCCV >gi|304425399|gb|AEEM01000020.1| GENE 31 27731 - 28597 1040 288 aa, chain + ## HITS:1 COG:SPy0123 KEGG:ns NR:ns ## COG: SPy0123 COG1281 # Protein_GI_number: 15674340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 288 290 459 80.0 1e-129 MDKLIKSISKSGSFRAYVLDSTETVRTAQEKHQTLSSSTVALGRTLIANQILAANQKGDS KVTVKVIGDSSLGHIISVADTKGHVKGYIQNTGVDVKKTATGEVMVGPFMGAGQFVVITD YGTGNPYTSSTPLVSGEIGEDLAFYLTESEQTPSAVGLNVLLDDNDKVEVAGGFMLQVLP GASEEEINRYEKRIQEMPAISKLLESDDHVEALLKAIYGEDEYKVLAEEEIGFNCDCSRE RFEAALVTLGKEELKAMKDEDHGAEITCQFCGKTYNFTENDLEGLIND >gi|304425399|gb|AEEM01000020.1| GENE 32 28590 - 29567 459 325 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] # 10 297 30 316 353 181 35 1e-44 MTKLSSSFMIGDVEIPHRTVLAPMAGVTNSAFRTIAKEFGAGLVVMEMISEKGLLYNNEK TLHMLHIDENEHPMSIQLFGGDADGLKRAAEFIQENTKADIVDINMGCPVNKVVKNEAGA KWLKDPDKIYHIINEVTSVLDIPLTVKMRTGWSDSELAVENALAAESAGVSALAMHGRTR EQMYTGTCDHETLARVSKAITKIPFIGNGDVRNVHDAKYMIEEIGVDAVMVGRAAMNNPY IFTQINHYFETGEELPDLPFVKKLDIAEDHLKRLINLKGEKIAVREFRGLAPHYLRGTAG AAKIRGAVSRAETIDEVKEIFNSLR >gi|304425399|gb|AEEM01000020.1| GENE 33 29641 - 32082 1730 813 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 4 807 6 806 815 671 43 0.0 MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEY EAAAVLAIGKSPLTDVDRVHFVEQSKALSDVLAFAESICQVTGGNEIGTEHMLYAMLLNL DLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKENIKAIHELRKPKKSTMGGAF SEMMKPQSTAGDLSDFTRDLTEMARQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEE DGHIILFIDEVHTIMGSGSGIDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAA LSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDEAVLTAVKAAHRYLTSKNLPD SAIDLLDEASATVQGLVKKEAPAILTPADKAILEGDFKLATKLLKESHKKPNRKPTAVTE DDIMATLSRLSGIPVEKMTQADSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRT GKRPIGSFMFLGPTGVGKTELAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGY VGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSRGRKVDFSNTI IIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKAYRPEFINRIDEKVVFHN LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKV EDELSELILSGELASGNTLKIGVSKGQLKFDIA >gi|304425399|gb|AEEM01000020.1| GENE 34 32079 - 32540 303 153 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 3 149 2 153 158 121 44 1e-26 MAKNTSDSIEEYIKQLLAQSGIAEIKRSNLADTFQVVPSQINYVIKTRFTESRGYTVESK RGGGGYIRIARVRFSDQHQMFGNLMSNIGERISEQVFTDLIQLLFDEKIITEREGNLILA TASDDVLGKDAPEIRARMLRKILQRLDRKGFHL >gi|304425399|gb|AEEM01000020.1| GENE 35 32824 - 32913 105 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLCQSLLLVIVRNIVNYVVIHLAQLFGTK >gi|304425399|gb|AEEM01000020.1| GENE 36 33251 - 33715 591 154 aa, chain + ## HITS:1 COG:PH1658 KEGG:ns NR:ns ## COG: PH1658 COG2426 # Protein_GI_number: 14591427 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 1 141 7 148 159 58 32.0 4e-09 MNYIITFLIAMVPLVELRGAVPYAIATGIPMWQALIIGVVGNMLPVPIIFFFARRVLEWG ADKPVIGGFFTWCLKKGHNGGKKLAETAGDRGLFIALLLFVGIPIPGTGAWTGTLAASIL DWNFKQSVIAVMLGVILAGLIMGTLTILGLGAFS >gi|304425399|gb|AEEM01000020.1| GENE 37 33830 - 34690 791 286 aa, chain - ## HITS:1 COG:SP1057 KEGG:ns NR:ns ## COG: SP1057 COG1396 # Protein_GI_number: 15900927 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 284 1 288 288 86 26.0 6e-17 MITDIATLIKTKRKEKGLTQKELAEGICAQAVISKIEKNETTPSVDLFFKLVKRLDIDMS VVSEIFELTNAIHHNRVYSDKVKQLLYMRDYENLVYVLKALDNTSMTTEELLYYDWLLAI TDYMTKQVNLPETIQKLEKLLPQVKNHYFQLYLKVVSAIASIYSENHEDELALQYFESII DDYQVSDDFRDRVTFLYSISRAYFVKGDMTNSLTYISRAIDEILEKKSIYLLGDSLLMKA YVLDETKLYEEAKKYCRNAITIFELENKELLKNMAQKLLIDIEEKI >gi|304425399|gb|AEEM01000020.1| GENE 38 34732 - 35928 806 398 aa, chain - ## HITS:1 COG:lin0332 KEGG:ns NR:ns ## COG: lin0332 COG0477 # Protein_GI_number: 16799409 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 5 398 3 396 405 289 44.0 6e-78 MILRKYKDFCQLFLGRLISNCGDSIYTIVLSWYVLEMTNSAWYVGVLNFLIFIPNTFSFI FGKKIDSLPKKHLLVFLELAQLLAVLGIVLGIALRGVNANLSLAIIFSCVFIASTVGLNT YTVQDALVPKIVPTKDLAKAEMYMSVAYNGTEYVFTAISGFLLSVLSYIPLLLIDVLTFL SSILLFRQISFKEKIEKTHEQTDFWSGLRFIWQNKVVFSITLGGAIVNFLFGGFNVYQLL IAKDVGNSAFYGLLVSACAVGTLLGTTVVANFVLQKFSLGQAFWLATAIFGIGIGSTAMV HSRLVLLLIWFISCLFLGITHVAQKPILQTEIPDEHLGEVFSAFYTVTIPTLAIGSLIFG YVAKTMSWRLFLVLFAMALLLVSLLYFSNRKLRHYDIS >gi|304425399|gb|AEEM01000020.1| GENE 39 36145 - 37182 457 345 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 3 336 4 276 283 180 37 2e-44 MAITAAQVKELREKSGAGVMDAKKALVETDGDMEKAIELLREKGMAKAAKKADRVAAEGL TGLYVDGNVAAVVEVNAETDFVAQNAQFVELVKETAKAIAEQKPANNEEALKVTLASGET LEAAYVNATATIGEKISFRRFALIEKTDDQHFGAYQHNGGRIGVVTVIEGGDEALAKQIS MHVAAMKPTVLSYEELDQEFIHDELAQMNHKIDQDNESRAMVNKPALPHLKFGSKSQLSD EVIAQAEEDIKAELKAEGKPEKIWDKIIPGKMARFMLDNTKVDQQYTLLAQVYIMDDSKT VEQYLDSVNAKVITFARFEVGEGIEKAANDFESEVAATMAAALNK >gi|304425399|gb|AEEM01000020.1| GENE 40 37293 - 38060 1237 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|22537971|ref|NP_688822.1| 30S ribosomal protein S2 [Streptococcus agalactiae 2603V/R] # 1 254 1 254 256 481 95 1e-135 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADAAYEFVRDA AANDAVILFVGTKKQAADAVKEEAERAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKRM EEDGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLG IPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQGEDADVDFASEAQA DSIEEIVEVVEGDNE >gi|304425399|gb|AEEM01000020.1| GENE 41 38585 - 39538 969 317 aa, chain + ## HITS:1 COG:L152002 KEGG:ns NR:ns ## COG: L152002 COG1619 # Protein_GI_number: 15673695 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Lactococcus lactis # 2 317 7 323 324 366 56.0 1e-101 MKKLSPNSHIRVLSPSDSIARLGGFEANLSAKETLENLGFRVSFSEHYLESDMLYSSSIK SRVADLHAAFADDSVDAILATIGGFNSNELLPYLDYDLIAKHPKIICGYSDSTAFLNAIF AKTGNLTYMGPSYSSFKMKEGQDYQSKAWLNAMTKSAYDLVPSQEWSSDPWYDPTQPRHF MPTEWKIYNAGKASGTIIGGNLSTFGLLRGTPYTPQVNDYVLFLEEAEEDDYHDFDRNLA AILQAYPNPKAVLIGRFPKECQMTPEILTYILDKHPLLKTIPVMYDLDFAHTQPLFTITI GAQASIDTDTLSIHIEE >gi|304425399|gb|AEEM01000020.1| GENE 42 39649 - 39711 143 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKRLINLLPILIFLLLPLI >gi|304425399|gb|AEEM01000020.1| GENE 43 39808 - 40674 967 288 aa, chain - ## HITS:1 COG:SP0141 KEGG:ns NR:ns ## COG: SP0141 COG1396 # Protein_GI_number: 15900079 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 7 278 5 276 287 199 39.0 5e-51 MKLEKSMQLGELYRELRIARGLKLKDIARDNLSVSQLSRFENGQTMLAADKLLIAISGIH MTFSEFGHAINNYEETSFFKLGNVISDLYNKQDIDGLRRLLETDKNTESFDVYNRLNELM IKITIHSLDPSYVITEDEKNFLTSYLYEIEEWTEYELYIFGNTMTILSDDDLIFLGKAFV ERDKLYLSLPNHKKSAELVFLNLILTLISYRKIYQATYFIECLEKIITYQDMFATICLNF SKKIIAHIESGSDDLSDLEHYIACVEEVGNPTIVAFLKANLSSLFDQT >gi|304425399|gb|AEEM01000020.1| GENE 44 41022 - 42917 2388 631 aa, chain - ## HITS:1 COG:SPy2095 KEGG:ns NR:ns ## COG: SPy2095 COG3590 # Protein_GI_number: 15675851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Streptococcus pyogenes M1 GAS # 1 631 1 631 631 1041 81.0 0 MTRYQDDFYDAVNGEWEKTAVIPDDKPRTGGFSDLADEIEDLMLATTDKWLSGEDVPEDS ILQNYIKFHRMTSDYDKREEVGVAPVLPLIEEYKNLDSFAEFAGKIADFEMAGKPNEFPL GVAPDFMNAQLNVLWAEAPGTILPDTTYYAEDNEKGKELLAIWRQMQEELLPKFGFSAEE TKDLLDKVIALDAKVAKYVLSREESSEYVKLYHPYDWADFTKLAPELPLDAIFTQILGEI PDKVIVPEERFWTEFAADYYSEKNWDLLKADLVLSATGAFNGYLTDDIRVLSGAYGRALS GTPQAMDKKKAAYYLASGPYNQALGLWYAGQKFSPEAKADVEHKVATMIDVYKKRLTSAD WLAKETRDKAIVKLNVITPHIGYPEKLPETYAKKIIDDSLSLVENAQNLAKISIAHSWSK WNKPVDRSEWHMPAHMVNAYYDPQQNQIVFPAAILQAPFYSLEQSSSANYGGIGAVIAHE ISHAFDTNGASFDEHGSLNNWWKEADYKAFTERTDKIVDQFDGLDSYGAKVNGKLTVSEN VADLGGVACALEAAKQDEDFSARDFFINFATIWRMKARDEYMQMLASIDVHAPGKLRTNV TLTNFDEFHTEFDIKAGDPMWRAPEDRVIIW >gi|304425399|gb|AEEM01000020.1| GENE 45 43053 - 44033 1165 326 aa, chain + ## HITS:1 COG:lin0303 KEGG:ns NR:ns ## COG: lin0303 COG0673 # Protein_GI_number: 16799380 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Listeria innocua # 4 326 2 323 323 327 49.0 1e-89 MTKKHYNWATLGTGVIANELAQALQQQGRKLYSVANRTYDKGLAFAEKYGIDKVYQTIDE VFDDPNVDIIYISTPHNTHINFLRKALANGKHVLCEKSITLNADELDEAIKLAEENHVIL AEAMTIFHMPIYRKLSEIIATGKLGELKLIQMNFGSYKEYDMTNRFFNRQLAGGALLDIG VYALSFVRWFMTSTPTQIASQVKLAPTGVDEQAGILLTNSQGEMATLTLSLHAKQPKRGT IAYDKGYIELYEYPRGQKAVITYTEDGHQEVIEAGSTALALSYEVADMENAVSGQENAMH LDYTKDVMDIMTKLRKDWNLTYPEEE >gi|304425399|gb|AEEM01000020.1| GENE 46 44431 - 46062 1598 543 aa, chain - ## HITS:1 COG:SPy2096 KEGG:ns NR:ns ## COG: SPy2096 COG0366 # Protein_GI_number: 15675852 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pyogenes M1 GAS # 1 542 1 542 542 890 77.0 0 MAFDKRKVVYQIYPKSYKDTTGNGVGDLRGIIEKLPYLEELGVDVIWLNPFYPSPQRDNG YDISDYTAVNPLFGTMADFEELSQKAKEHGIELMLDMVLNHCSIEHEWFQKALAGDKYYQ DFFILRDTPTNWVSKFGGNAWAPFGDTGKYYLHLFDITQADLNWRNPHVREELFKVVNFW REKGVKGFRFDVINLIGKDEELKDNTAFDGKPEYTDRPIAHDYLKMLNQATFGQDDNSMT VGEMSFTDIPNCIQYSNPDSHELDMVFNFHHLKVDYENGQKWTLKSFDFEKLKTLFHTWG EKMSEGGGWSALFWNNHDQPRAINRFIDVKNFRNEGATMLAAAIHLSRGTPYIYMGEEIG MLDPDYDSMADYVDVECLNAYQELLTSGKTEAEAFAIIQAKSRDNSRTPMQWDASENAGF STGTPWLKVGKTYRDINVENEKSGPIFTFYQQLIRLRKDLPIIAEGSYQSAYQDNPYIYA FERHFDGKQLLVLNNFFAKEVELDLPEAYQSGQVLLSNYPETNLSEKITLKPYQTLAIYQ ENL >gi|304425399|gb|AEEM01000020.1| GENE 47 46077 - 48050 2403 657 aa, chain - ## HITS:1 COG:SP1884_2 KEGG:ns NR:ns ## COG: SP1884_2 COG1263 # Protein_GI_number: 15901712 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pneumoniae TIGR4 # 92 475 1 383 383 603 80.0 1e-172 MGKFERDAREMLEAIGGKENIAAVTHCATRMRFVLNDESKADVKRLEAIPAVKGTFTNAG QFQAIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAQKNQNWLQRALAMLAEIFTPIIPAI IVGGLILGFRNILEGVEWSALNGKTIVEVSQFWSGVNSFLWLPGEAIFHYLPVGIVWSVT RKMGTSQILGIVLGICLISPNQLLNAYNVASTSAAEIAANWTWDFGFFTVQKIGYQAQVI PALLAGLSLAYLERFWRKHIPEVISMIFVPFLSLIPALILAHTVLGPIGWTIGKGISAVV LAGLTGPVKWLFGAIFGALYAPLVITGLHHMTNAIDTQLIADAGGTGLWPMIALSNIAQG SAVLAFYVMNRHDEREAQISLPAAISAYLGVTEPALFGVNLKYVYPFVAGMIGSGIAGLF CTSFNITANAIGIGGLPGILSIQAKYMGLFAIDMVIAIIIPFVLTFIFRRVGFLTKAEDE VKSDENSQVQAVVEAKKDAEVPAGTVISIQSPLAGRAKNLSEAPDPVFAQGVMGQGVVIE PTEGELVAPVDGVVSVLFPTKHAIGLVSDEGLELLMHIGMDTVNLDGDGFTAHVKQGDRV SVGDALISFDMAAIQAAGYPVATPVIVTNQNDFQTDVTRELPCDVARGEAIFTASKL >gi|304425399|gb|AEEM01000020.1| GENE 48 48246 - 48959 676 237 aa, chain + ## HITS:1 COG:SPy2099 KEGG:ns NR:ns ## COG: SPy2099 COG2188 # Protein_GI_number: 15675854 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 237 1 237 237 306 68.0 2e-83 MKKYEQIFKELEHDITSGIYQAGDYLPTENELTQTYHMSRDTIRKALSLLAEAGLIQKIH GSGSQVIKHEQIDFPVSQLTSYKELVDAHHINSKTNVIAIDKLIVDEKLAALTGFKKNNL VWRIIRQRVVDGTASVLDIDYLDKKIVPNMTREIAEQSIYDYLENQLHLIIAYAQKEITI DQLTDRDKLLLDIGAEHHVVSVKSKVYLANKHQFQFTESRHKLEKFRFVDFATRKPQ >gi|304425399|gb|AEEM01000020.1| GENE 49 49260 - 50087 803 275 aa, chain - ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 37 266 4 241 251 187 42.0 2e-47 MIKKIKENYLTISLVGILLIGLSLLLYPTVSDYWNSFHQSEAVAGYVQDVEDMSEQKKAE MLAAAQAYNQTLQTGIIPDLNLSSAETKTYDQTLDVTGTGIMAYVEIPKLNTTLPIYHGT DDSVLQVAIGHIPGTSLPVGGKGTHAVISGHRGLASAKLFTDIDRLVEGDTFMIQVLDET LTYEVDQILTVTPDDVSALAIDPEQDYVTLVTCTPYGVNTHRLLVRGHRIANQENAARVT SEASQVKPLMVAPFLGIFILIVLLLVVNVYRRLRH >gi|304425399|gb|AEEM01000020.1| GENE 50 50275 - 51717 1705 480 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2178 NR:ns ## KEGG: GALLO_2178 # Name: not_defined # Def: putative peptidoglycan linked protein (fimbrial structural unit) (LPXTG motif) # Organism: S.gallolyticus # Pathway: not_defined # 1 480 1 480 480 785 100.0 0 MKKLKLIFATFFAALFTFTGGKALAYDITVENGGSGTYESYQIFTGTLSEDGKTLSNIEW GNGITTAGQTALQEKYGVSSAAGLAEVLGADDFTASQAEEFAKVVGQYLQNAGGLTGLAA GYYLVQNASVGNNEAHTNYILQVVKDVIVEPKTSVPTVEKKLKDTNDTTGETTDWQDSAD YDINDSVPFQLTATLPDNLASYDEYYLELSDTLSAGLTYNKDAKVYLVNGTTKTDVTSSF TIADDGSSFKINNLKSLDGVTSSTKVVVEYTATLNSNAVIGLEGNPNTVKLIYSNNPNYT GSGETSPTGETPEDKVIVFTYKVVVNKVDQSGNALAGAGFTLYKKDSSGNWNAVSDEITG VTTFTFSGLDDGDYKLSETTTPNGYNTIDDITFTVTADHDVKSDSPALNSLSGDVTTGSL TFASNITEDDASLTTNVVNKKGATLPSTGGMGTTILYVVGTILVLAAGILLVTKKRMDAK >gi|304425399|gb|AEEM01000020.1| GENE 51 51824 - 53800 1748 658 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2179 NR:ns ## KEGG: GALLO_2179 # Name: not_defined # Def: putative collagen-binding protein Cne precursor ((FPXTG motif protein) # Organism: S.gallolyticus # Pathway: not_defined # 1 658 1 658 658 1176 100.0 0 MFYYLGEGIINFRKLFIALVLIIFSFFTVSEVRAADVSNRVTSLTVATTELQDGGRTTVR VEFNDRAGKIHSGDTIEVTWSISNSIYLNGYTKSIPLTIQGVNVGTLEVTEHNAIFKFNS NIETMENVSGWGEFEVIGRNVTNTSSENTGTAVVQVGGYSQNISITKPQSGTGTSSFYYK TGDIQPSDTNRVRWFLLVNNNKEYVESDVTIEDDIQSGQTLDMSSFDITISGYQNKRFVG ESALEEFKRSCPNSSIEITQKSEGGHISIRLSRDDVILNTISIHYKTKILDFDQEKFANN SNITYKPLYKDWVTNKESNYEVVNVNANGGVDGSRYTSVTVNKVWNDKDNQDGKRSDKVV IQLLADGQEISGKQLELSEENGWSGTFEKLNKYHSDNTLITYTVKEVTDLPDYQTTVSEN SKNNYTITNTHIPEVIDLSGKKIWDDNNNQDGIRPETITVHLLANGVDTGQVKTVSKSDN WEYQFKDLPKYQNGEKVVYTVSEDVVVGYEMSVSGMNLTNTHTPEVTNILISKYWDDNDD KLKKRPESIQITLHANGKEYQTVTLTASNQWQYEFKDLPKYKDGEKIAYTVTEADVPNYQ LISIEEDESGNWKITNKVEESYLFPNTGGKGISGYYTVGIVLLLSIGLLFLKKFIGDY >gi|304425399|gb|AEEM01000020.1| GENE 52 54302 - 54904 424 200 aa, chain + ## HITS:1 COG:CAC0723 KEGG:ns NR:ns ## COG: CAC0723 COG1309 # Protein_GI_number: 15894010 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 185 1 178 185 65 26.0 7e-11 MPHLSKKQHQILETKHRLSKALYLLVTERHYDKITVYHILEKAGVSRRTFYRYFNSKSDL MDYCLDNFIEGYYLQRDNFILAQQAEDVFLVTLNFMYYNREFIRSLVESGHFSLLTAKFN DKSELIYKTINLPWCVEDTADHNIDYISKGLFGAYLNVLQFWLTKDEPERPEHIAKNLAL LFSSIPGYFDNVSQNSNKDN >gi|304425399|gb|AEEM01000020.1| GENE 53 55873 - 56844 1404 323 aa, chain - ## HITS:1 COG:SP0259 KEGG:ns NR:ns ## COG: SP0259 COG2255 # Protein_GI_number: 15900193 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 323 10 332 332 566 89.0 1e-161 MGDEEFAERTLRPQFLKEYIGQDKVKNQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMA FVIANELGVNLKQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRMPMAVEEVLYSAMED FYIDIMIGNGETSRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYDVEDLTEI VERTADIFEMEIVHEAAQELARRSRGTPRIANRLLKRVRDYAQIMGDGIITKDITDKALT MLDVDHEGLDYIDQKILRTMIEVYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIM RTRTGRVATEKAYEHLGYPYSEK >gi|304425399|gb|AEEM01000020.1| GENE 54 57369 - 57983 671 204 aa, chain - ## HITS:1 COG:SPy2105 KEGG:ns NR:ns ## COG: SPy2105 COG0602 # Protein_GI_number: 15675857 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 204 1 204 204 384 90.0 1e-107 MEEKNWNTPEPGEWKSEELSQGRIIDYKAFNFVDGEGVRNSLYVSGCMFHCKGCYNAATW SFKAGMPYTQELEEQIMADLAQPYVQGLTLLGGEPFLNTGILLPLIKRVRRELPEKDIWS WTGYTWEEMMQETPDKLEMLSLIDILVDGRFDITKKNLMLQFRGSSNQRIIDVQKSLKAG EVVIWDKLNDGDQKFEQVSRDDLI >gi|304425399|gb|AEEM01000020.1| GENE 55 58025 - 58531 259 168 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 [Mesoplasma florum L1] # 41 163 47 169 170 104 44 2e-21 MQLRRPELSDKAAIIDMMKEFEASQSAHDGGFWSVDNFVYEDWIERNQLSEMGIDVPSTF VPAIQFVSFDDNGRALGFLHLRLRLNDNLLNKGGHIGYSIRPSERHKGLAKEQLHLGLLE AKKKNIKQALVTCHTDNIASRKVILANGGVLEDVRESTERYWINLDEE >gi|304425399|gb|AEEM01000020.1| GENE 56 58543 - 58689 199 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKYQLDYKGMQQVERFHEKHSNVKTDKKARVSQLKAQFLEKAKKKSK >gi|304425399|gb|AEEM01000020.1| GENE 57 58929 - 61145 2584 738 aa, chain - ## HITS:1 COG:SPy2110 KEGG:ns NR:ns ## COG: SPy2110 COG1328 # Protein_GI_number: 15675860 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 731 1 731 732 1327 84.0 0 MITLEKETIATQPAVKVIKRDGRSVNFDADKIYNALVKASNNVTKMSPVVEAKLEAISDN IIAEIFDRFKDNVKIYEIQNIVEHELLEANEYAIAQEYINYRTKRDFARSQATDINFTID KLLNKDQTVVNENANKDSEVFNTQRDLTAGIVGKSIGLKMLPAHVANAHQKGDIHYHDLD YSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA DRIDEFLAPYAELNYKKHLKDAQDWVAEDRREDYARTKTKKDIYDAMQSLEYEINTLFTS NGQTPFTSLGFGLGTNWFEREIQKAILEIRIKGLGSEHRTAIFPKLIFTLKSGLNLEVGT PNYDIKQLALECATKRMYPDVLSYDKIVELTGSFKAPMGCRSFLQGWKDENGVEVNSGRM NLGVVTVNLPRIAMESNGDINKFWEIFNERMGIAKDALVYRVERVKEATPANAPILYQYG AFGKRLGRYDNVDELFRHRRATVSLGYIGLYEVGTVFYGPEWETNPEAKEFTVDIIRKMK KLCTEWSDEFDYHFSIYSTPSESLTDRFCRLDTEKFGIVKDITDKEYYTNSFHYDVRKDP TPFEKLDFEKAYPEAGATGGFIHYCEYPVLQQNPKALEAVWDYAYSRVGYLGTNTPIDRC YSCGFEGDFTPTERGFVCPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVK HMSGSTIKNPGDYSKHKA >gi|304425399|gb|AEEM01000020.1| GENE 58 61247 - 62836 1496 529 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2186 NR:ns ## KEGG: GALLO_2186 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 529 1 529 529 873 99.0 0 MNTSEQVNVDQSTAQSYSRSSRSARKVSENKSHQEASRRTKVPQPHKLYLLILSVVVSCL SVSMPVFTDMANSVQSQNLYIGLMFTKGQLPFTDMFATGGFLYYALIALAYYLGSTLWLV PIQIATFYLSGIYFYKLVNYFTSSQRVAVAFSGIFYLLNIALGFGGLYPIQFAMPFVMVS LWFLTKYFADIIKDEAFILYGFAGAAAMLLEPRTLVFWGLSFLTIIVYNLTQKHFARGFY QLLCIIFGTILVFYTVGYFILNLQVLSSYISQAIVYQFTYFATSDSNFILTLLFQVVVAL VSGILLGALTFGKIIKGASDKVSKWLIFLVFLGFLVIDLLSQSYHFYHLLTVLPFGLLLT AMALGERYQRSLTKTSHRRKKSSSDDKGIFGLYLSRHLYLPILLLIIGVGQPVVSYFLSS GIDSERSTIASYLKKQTSSDDTIYVWDTSSKIGIKSQLASSSQFTSPVVNTTKTSNEKTL EDELLQNLASYIVVNNDEKISDTIKNDISSNYEEVSISGVSGFTVYHKK >gi|304425399|gb|AEEM01000020.1| GENE 59 62879 - 63007 61 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKNACLSQEERSFLKRYKTKPYHRFREILVYCAILPKLTND >gi|304425399|gb|AEEM01000020.1| GENE 60 63099 - 63416 503 105 aa, chain - ## HITS:1 COG:SPy2112 KEGG:ns NR:ns ## COG: SPy2112 COG3906 # Protein_GI_number: 15675862 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 7 105 3 101 101 139 91.0 9e-34 MAHNHNHDHNHDHEHEVITLVDEQGNETLFEILLTIDGREEFGKNYVLLVPAGAEEDEQG QIEIQAYSFTENEDGTEGDLQPIPEDSDAEWDMIEEVFNSFLDED >gi|304425399|gb|AEEM01000020.1| GENE 61 63449 - 63859 487 136 aa, chain - ## HITS:1 COG:SPy2113 KEGG:ns NR:ns ## COG: SPy2113 COG0816 # Protein_GI_number: 15675863 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Streptococcus pyogenes M1 GAS # 1 136 4 139 139 218 80.0 2e-57 MGLDVGSKTVGVAISDPLGFTAQGVEIIRIDEEAGEFGFERLEELVKQYKVDKFVVGLPK NMNNTEGPRVEASKAYGDKINELFNIPVDYQDERLTTVQAERMLVEQADVSRGKRKKVID KLAAQLILQNYLDRMF >gi|304425399|gb|AEEM01000020.1| GENE 62 63865 - 64134 397 89 aa, chain - ## HITS:1 COG:SPy2114 KEGG:ns NR:ns ## COG: SPy2114 COG4472 # Protein_GI_number: 15675864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 89 1 89 89 149 89.0 1e-36 MGFTDETVRFNLDDSNKKEISETLTTVYRSLDEKGYNPINQIVGYVLSGDPAYVPRYNDA RNQIRKYERDEIVEELVRYYLKGNGIDLK >gi|304425399|gb|AEEM01000020.1| GENE 63 64457 - 64855 449 132 aa, chain - ## HITS:1 COG:SPy2115 KEGG:ns NR:ns ## COG: SPy2115 COG1393 # Protein_GI_number: 15675865 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pyogenes M1 GAS # 1 132 1 132 132 225 92.0 2e-59 MIKIYTISSCTSCKKAKTWLNAHQLPYKEQNLGKEPLTREEILAILTKTENGIESIVSSK NRYAKALDCDIEDLSLSEVIDLIQENPRILKSPILIDDKRLQVGYKEDDIRAFLPRSIRN VENAEARLRAAL >gi|304425399|gb|AEEM01000020.1| GENE 64 65125 - 66279 1715 384 aa, chain - ## HITS:1 COG:SPy2116 KEGG:ns NR:ns ## COG: SPy2116 COG0468 # Protein_GI_number: 15675866 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Streptococcus pyogenes M1 GAS # 1 384 1 378 378 598 89.0 1e-171 MAKKTKKTEAITKKFGDERKKALDDALKLIEKDFGKGAVMRLGERAEQKVQVMSSGSLAL DIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAAL GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDNHVGLQ ARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG NTQIKGSGDQKDSNIGKETKIKVVKNKVAPPFKTAEVEIMYGEGISRTGELVKIASDLDI IKKAGAWFSYNGEKIGQGSENAKKYLAEHPEVFDEIDHKVRVHYGLVEETEDEKAADVVE ESAATNDNVDEVVLDLDDAIEIEE >gi|304425399|gb|AEEM01000020.1| GENE 65 66329 - 67588 209 419 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 273 418 759 904 904 85 35 1e-15 MKAEIIAVGTEILTGQITNTNAQFLSEEFAKLGIDVFFQTAVGDNEERLLSVIDLASKRS ELVVLCGGLGPTEDDLTKQTLAKYLGRDLVFDEQANKRLDEFFATRPQFARTANNERQAQ LIEGSIPLQNSTGLAVGGVLEVNDVTYVVLPGPPSELKPMVLDSLVPLLSGDHKQLYSRV LRFFGIGESQLVTVLTDLIDNQTDPTIAPYAKTGEVTLRLSTKADDVASAKAKLDALEHK ILAKKTLNSIPLEQLFYGYGDDNSMARVVFDLLKEKHKTITAAESLTAGLFQSSIADFSG SSAVFNGGFVTYSIEEKSKMLHIPLEDLQEHGVVSHFTAEKMAEQSRLLTDADFGIGLTG VAGPDSLEGHPAGTVFIGIATREKVHSIRVVIGGRSRSDVRYIATLYAFNLVRQALLQG >gi|304425399|gb|AEEM01000020.1| GENE 66 67720 - 68910 635 396 aa, chain - ## HITS:1 COG:HP1165 KEGG:ns NR:ns ## COG: HP1165 COG0477 # Protein_GI_number: 15645779 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Helicobacter pylori 26695 # 4 384 2 378 386 187 38.0 4e-47 MKSITRNTFVYLLANFLVTVAYSMPHSILTVILLSKGLSLSQILIVQSAYSIAIVLFEFP SGLIADNYSRKNIYSLSKLFLIVMFLIVLFSNNFYLIFAAWFCYGIASALDSGTLDAYII NQLKIAHREDDLRKFLALNNRLEIVGLLLGSSLGGVLYLSIGINIYVLGIAFLVASTLVT FFFFNENLKNTTLEESHVSVLKQQITDSFIELRKQPRLGVILIFDFLTQIFFQTHFQLWQ SFFLSKGVDTKYFPAFYIAFQIITLFSYSINIDGIKKYAGLIKFCPLIIFLPLTFLSKHL WVLFPAYFIFIFVFYVIEFILNYYFNKMVSIDNISSLVSFKSTISRLGSICLLCLLSLMV KVFDVEKVMAVNFMASLLFLFLLVIIWLRKQPRLTK >gi|304425399|gb|AEEM01000020.1| GENE 67 69070 - 69243 109 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKEENYVKYFFILLILLVLIIFGVLTMKSGRLLFLFEGIGLSLGVSVTWLYWKKKH >gi|304425399|gb|AEEM01000020.1| GENE 68 69293 - 69757 667 154 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2194 NR:ns ## KEGG: GALLO_2194 # Name: not_defined # Def: hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 154 1 154 154 243 100.0 2e-63 MVRKNIIISLSALVLLGAFGAGLTTRQTSVQPTKVVTADTKDTVVEQQSSVDDEVSQISN TTIREFIQYFRATGDNPDEFCLFEDLSDDKRIVVIDDGTTPADKAPVIGYSADDAESTVV GSLTTEEGTITFDTSDPSQSATIAEIKAAAAQYR >gi|304425399|gb|AEEM01000020.1| GENE 69 69827 - 70234 347 135 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2195 NR:ns ## KEGG: GALLO_2195 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 135 1 135 135 186 100.0 2e-46 MKKYFPFVIIIAYIISLFLPYASGISVETYQLTTISGISFLKNHWLVASILIVLLLIYQW RGKQSLVAGNVLLVLIGVILLYLYLIPFIGAFGESFMVGLRLIRDTLATSLMIGYYLSAL FAFVGYFWLIKKRRK >gi|304425399|gb|AEEM01000020.1| GENE 70 70397 - 71251 686 284 aa, chain + ## HITS:1 COG:lin0864 KEGG:ns NR:ns ## COG: lin0864 COG1396 # Protein_GI_number: 16799938 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 5 277 4 273 279 120 28.0 4e-27 MRWDFGKVYKDIRQSKGLTQEEICGDMLARSTLARIESGQVIPKFDTFIFLLQQINMSLE EFEYICNVYQPSERQKLLNIANNNLSITDNTELLSLKQQCQEYLQTHHDIPIQQLLDRLT VTIHVREFGGESKDTTFQETTQKIWHYLEKQNTWYQNDFKLLLTILYHFPLETLKTITPK ILTNLVKYTDLYNIKPLQLTLLTNLASIYLDNHQTKECETFSLEALKLAKELKRYDFLGI AQVRLGICRDDNSLIDKGMSLLHLTEEEKIFEALEKEVAKHRQI >gi|304425399|gb|AEEM01000020.1| GENE 71 71325 - 71918 757 197 aa, chain - ## HITS:1 COG:SPy2119 KEGG:ns NR:ns ## COG: SPy2119 COG0632 # Protein_GI_number: 15675869 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Streptococcus pyogenes M1 GAS # 1 197 1 198 198 296 81.0 1e-80 MYDYIKGKLTKITAKYIVVEAGGLGYIVNVANPYSFSDLVNQEVQIYLHQVIREDAQLLF GFHTEDEKAVFLNLISVSGIGPTTALAIIAVDDNEGLVNAIDTSDIKYLMKFPKIGKKTA QQMVLDLAGKFVDVSVENGKASQTKTATNEQLEEAMEALLALGYKAAELKKIRKFFEGTN ETAEQYIKSSLKMLMKA >gi|304425399|gb|AEEM01000020.1| GENE 72 71920 - 73863 1531 647 aa, chain - ## HITS:1 COG:SPy2121 KEGG:ns NR:ns ## COG: SPy2121 COG0323 # Protein_GI_number: 15675871 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Streptococcus pyogenes M1 GAS # 1 647 1 660 660 1017 78.0 0 MSKIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDN GEGIAQDDVALSLHRHATSKIKNQADLFRIRTLGFRGEAIPSIASISHFTVKTATADENY GTLLVAKGGEIEKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSL AHPEVAFSLINDGRQMTTTSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEVSGYISLP ELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVH PTKQEVRISKEKELMSLISSAIAESLREQDLIPDALENLAKSSTRGLPKPEQTSLPLKQT DLYYDKERRDFFVKSDTVEEQPVQLFNEVDNSVKEVDKQQTSVKYAQRSEVDSQDDEHDN LDFKNKTKINKMIESLDNEESSTFPELDYFGQMHGTYLFAQGNGGLYIIDQHAAQERVKY EYYREKIGDVDSSLQQLLMPYLFEFSGADFIKLQEKMELLNQVGIYLEPYGNNTFILREH PIWMKEEEIETAVYEMCDMLLLTNEVSVKKYRAELAIMMSCKRSIKANHILDDYSARHLL VQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRRIQENHTSLRELGKY >gi|304425399|gb|AEEM01000020.1| GENE 73 73980 - 76550 2855 856 aa, chain - ## HITS:1 COG:SPy2148 KEGG:ns NR:ns ## COG: SPy2148 COG0249 # Protein_GI_number: 15675890 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Streptococcus pyogenes M1 GAS # 1 856 1 851 851 1312 78.0 0 MTKDKISPGMQQYLDVKKDYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADN PIPMAGVPYHSAQQYIDVLVEMGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTAVDSSK PDNANNFLVAIDSDGKTFGLAYMDVSTGEFFSTSLSDFTSLRSEILNLKAREVVVGYELS ETEQHSLVKQLNLLLSFEQERYEDVHLIDPDLTALEISAAEKLLQYVHTTQKRELSHLQK LVHYEIKDYLQMSYTTKSSLDLLENARTSKKHGSLYWLLDETKTAMGMRLLRNWIDRPLV NQAQIEERQNIVQVFLDNFFERSDLTDSLKGVYDIERLASRVSFGKANPKDLLQLGHTLA QVPTIKAILESFESPHLDKLVNNIDTLPELESLIRSAIAPDAPAVITEGSIIRTGFDETL DKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYFHVTNSNLSLVPDYFFRKA TLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRGQVERYITRLQDLAKAISTVD VLQSLAVVAENNHYVRPTFNDSHEIKIEKGRHAVVEKVMGTQEYIPNTITFDADINIQLI TGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVNLPVFDAIFTRIGAADDLISGQSTFMV EMMEANQAIKRASSQSLILFDELGRGTATYDGMALAQSIIEYIHNHIGAKTMFATHYHEL TALSTSLTHLINVHVATLEKNGDVTFLHKIAEGPADKSYGIHVAKIAGLPEELLQRADSI LTNLESGAAQLQLTPEVEVGPITVKSEVAEPVAEQLSLFADDSSNQEVIEALKKVDLMNL TPMQAMNVIYELKNML >gi|304425399|gb|AEEM01000020.1| GENE 74 76537 - 76893 227 118 aa, chain - ## HITS:1 COG:L79329 KEGG:ns NR:ns ## COG: L79329 COG4550 # Protein_GI_number: 15674193 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 4 109 3 108 115 67 45.0 8e-12 MSKYDQAVDKLVQAIQKHDSVQEFQKVEQKIKTFPELDSLVDDMKAYQQEAVLYHKIDKL VAEKAAGKQADQLQKDLSDLPIVKDYRNKMQDASDLVQYITKNLETKINEELTNNDKR >gi|304425399|gb|AEEM01000020.1| GENE 75 76890 - 77327 593 145 aa, chain - ## HITS:1 COG:SPy2150 KEGG:ns NR:ns ## COG: SPy2150 COG1438 # Protein_GI_number: 15675892 # Func_class: K Transcription # Function: Arginine repressor # Organism: Streptococcus pyogenes M1 GAS # 1 145 1 145 145 204 74.0 4e-53 MNKIERQNRIKRLIQSGHIGTQEEIKRHLQEEGISVTQATLSRDLREIGLLKLRDSSGKL YYSLSETSETTFGANIRSYILKVARAGFMLVLHTNLGEADVLANLIDSSDIPEILGTVAG ADTLLVICKDEETAQAFERDLSTSL >gi|304425399|gb|AEEM01000020.1| GENE 76 77518 - 79209 2427 563 aa, chain + ## HITS:1 COG:SPy2151 KEGG:ns NR:ns ## COG: SPy2151 COG0018 # Protein_GI_number: 15675893 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 563 1 563 563 939 83.0 0 MDTKRTIAERIQNIVPELDQEQIINLLEIPKNSDMGDLAFPAFSLAKILRKAPQMIAADV AEKMDATGFEKIEAVGPYINFFLDKKSISADVLGQVIANGSDYASQDLGEGRNVAIDMSS PNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGDEEA VKAHPIDELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQWFRDESLVEFN RLYDELGVSFDSFNGEAFYNDKMDEVVDILTEKGLLEESQGAQVVNLEKYGIEHPALIKK SDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQSAHFKQLKAVLNEMGFEWNEDITHV PFGLVTKEGKKLSTRKGNVILLEPTIAEAVKRAEDQINAKNPNLADKEAVAHAVGVGAIK FYDLKTDRLNGYDFDLDAMVSFEGETGPYVQYAHARIQSILRKAEFTPSVNQVYSLDDAE SWEIVKLIQDFPRIIKRAADNFEPSIVAKFAINLAQSFNKYYAHTRILDESPERDSRLAL SYATATVLKEALRLLGVEAPNEM >gi|304425399|gb|AEEM01000020.1| GENE 77 79322 - 79615 408 97 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2203 NR:ns ## KEGG: GALLO_2203 # Name: not_defined # Def: hypothetical bacteriocin # Organism: S.gallolyticus # Pathway: not_defined # 1 97 1 97 97 162 100.0 2e-39 MEKGNQLMEKLSKAYASLPDNEPLKADIFAVAQDLEKNENDQLARTKLAHAISQHLLTHH LKTESEITALYNEVADSPEKYKGNAALAIMLGSLFHP >gi|304425399|gb|AEEM01000020.1| GENE 78 79656 - 81161 1794 501 aa, chain - ## HITS:1 COG:TM0033 KEGG:ns NR:ns ## COG: TM0033 COG4099 # Protein_GI_number: 15642808 # Func_class: R General function prediction only # Function: Predicted peptidase # Organism: Thermotoga maritima # 16 443 6 377 395 100 26.0 7e-21 MKKSISKGIVLSAVSFLGVFAGSQVVSADTDVTIAKTSIVVKGYEFGPAVPKVVVKLDSK VSKVSKENVTVTTAGTERQVSKVYLSDKNGKKVTKDSKYVTIQMPVTFDTESNSGVASPF FYNMENFHNTWVDDYTVSIQGLTVTVNGEESELDSESNAINNRISTDVAAFSNRGSYSGT YTNPLTNQDEELTLQYAAYEPESLKNGKKNPLIIWLHGQGEGGTDTDITLLGNEVVALAK DDIQSHFTAGKQTGAYVLAVQTPTYWMDEGDGTNGAGAGVSRYTEVLMDTIKDYVSNHSD VDTNRIYLTGGSNGGYMTLNLAINNPDYFAALVPQAAAYSYYQYQRNEDGTYTTVPSDTS LSGTAFVKTDDIYFDEDKIAALKDIPIWFIHAANDTVVNPSDYSLPIYKALVDSGATNKW FSYYESVEGSDMKDTSYLGHWSWTYFFNDKVSGVQSVSDIKEADDLSGFSPNNKTNGGTS TAKVDGTAYDNIFDWLNAQKK >gi|304425399|gb|AEEM01000020.1| GENE 79 81501 - 82373 1032 290 aa, chain - ## HITS:1 COG:SPy2153 KEGG:ns NR:ns ## COG: SPy2153 COG1284 # Protein_GI_number: 15675895 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 15 289 16 290 290 430 81.0 1e-120 MVREKLGQIRSLVLIAIGVAIYTFGFVKFNMANALAEGGVAGVTLIAHALYGINPAYSSL ILNVPLFILGARIFGRKSLALTIYGTVLMSWFIWFWQRVPIQIVLENDMMLVAVVAGLFS GVGSGLVFRYGATTGGTDIIGRVIEEKFGFKLGQTLLFVDAVVLTASLVYIDLQHMLYTL VASFVYSQVLTIVQNGGYTVRGMIIITQKSEEAAQAILNGINRGVTYLNGQGAYSGNEKN ILYVVLNPGEVRDVKAIMADLDPDAFISIIDVDEVVSSDFKIRRKNYDKL >gi|304425399|gb|AEEM01000020.1| GENE 80 82457 - 83395 894 312 aa, chain - ## HITS:1 COG:SPy2155 KEGG:ns NR:ns ## COG: SPy2155 COG1284 # Protein_GI_number: 15675897 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 15 312 15 312 313 456 77.0 1e-128 MIKKTSLKKKTKFIVSRWAERYGLLKTMQSISREKYAEKVSASLFYGLLSAIAVNFFFQP GHVYSSGATGFAQVLSAISERLIGFRLPISVVFYAINVPLLVLAWYKIGHKFTVFTLITV SMSSFFIQIVPEITLTTDPLVNAIFGGLVMGTGVGFSLKSRISSGGTDIISLTIRKKTGR DVGSISLMVNGVIMIFAGILFGWQYALYSMVTIFVSSRVTNAIFTKQKKMQATIVTNRPE KVIAMIHTKLHRGVTQINDAEGTYNHEKKAILLAIITREEYNDFKYLMKKTDPNAFVSVA ENVHIIGRFVED >gi|304425399|gb|AEEM01000020.1| GENE 81 83388 - 85136 2385 582 aa, chain - ## HITS:1 COG:SPy2156 KEGG:ns NR:ns ## COG: SPy2156 COG0173 # Protein_GI_number: 15675898 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 582 1 582 582 1022 87.0 0 MKRTMYAGRVRSEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEEVSSDVM TTAESLRNEFVIEVTGEVAQREQENKNLPTGAVELKVSALTVLNTAKTTPFEIKDDVEVS DENRLRYRYLDLRRPKMLNNFKLRAKVTHSIRNYLDELEFIDVETPMLTKSTPEGARDYL VPSRVSQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDMETS FLSDQDIQDITEGMIAKVMKDTKGIDVTLPFPRMSYDDAMNNYGSDKPDTRFEMLLQDLT EVVKDVDFKVFSQAPVVKAIVVKGNADKYSRKNIDKLTEFAKQFGAKGLAWVKFTDGAIT GPVAKFLTSIEDKLTASLQLEENDLVLFVADTLEVANNTLGALRTRIAKELDMVDNSKFN FLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEESAHELEGDLAKVRAVAYDIVLNGYELGG GSLRINQKELQERMFKALGFTAEEANDQFGFLLEAMNYGFPPHGGLAIGLDRFVMLLAGE DNIREVIAFPKNNKAADPMTQAPSLVSDKQLDELALAIENND >gi|304425399|gb|AEEM01000020.1| GENE 82 85315 - 85815 405 166 aa, chain - ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 1 75 1 75 107 72 44.0 2e-13 MEFGEKLKQLRKANHLSQEKLSERIHVSRQAISKWEQGSAIPDTDNIVLLSKFFQVPIEY LLLDDEEMREAYQYKSLVTEESVLPKARVISLMIGSVIEIVAVVVAYLLQYQQKIVYDSY NTYPLDYLKEAPLNILVLIGGGLLFYAIYPLLIKCYDLVKRNLKVY >gi|304425399|gb|AEEM01000020.1| GENE 83 85987 - 87264 1401 425 aa, chain - ## HITS:1 COG:SPy2157 KEGG:ns NR:ns ## COG: SPy2157 COG0124 # Protein_GI_number: 15675899 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 424 1 424 426 731 83.0 0 MKLQKPKGTQDILPSESAKWQYVEAVARETFKKYNYSEIRTPMFEHYEVISRSVGDTTDI VTKEMYDFHDKGDRHITLRPEGTAPVVRSFVENKLFAPEVQKPVKMYYIGSMFRYERPQA GRLREFHQVGVECFGSANPATDVETIAMAYQLFQTLGIKDVTLHLNTLGSAASRAAYRQA LIDYLTPMREQLSKDSQRRLDENPLRVLDSKEKEDKIAVENAPSILDYLDDESQAHFDAV RSMLETLNIPYVIDTNMVRGLDYYNHTIFEFITTVDKSELTICAGGRYDSLVEYFDGPET PGFGFGLGLERLLLILEKQGIELPVEKEMDVYIAVLGQGANLKALELVQAIRNQGFSAER DYLGRKIKAQFKSADAFNAKTIITLGESEIEAGQVAVKNNKTREEVTVSFDEITNNFAEV LNKLD >gi|304425399|gb|AEEM01000020.1| GENE 84 87581 - 87757 300 58 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|171778547|ref|ZP_02919674.1| hypothetical protein STRINF_00526 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 58 1 58 58 120 100 3e-26 MAVPARHTSKAKKNKRRTHYKLTAPSVKFDETTGDYSRSHRVSLKGYYKGRKIAKAAK >gi|304425399|gb|AEEM01000020.1| GENE 85 87773 - 87922 251 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821942|ref|YP_140384.1| 50S ribosomal protein L33 [Streptococcus thermophilus LMG 18311] # 1 49 1 49 49 101 100 2e-20 MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVIFTEVK >gi|304425399|gb|AEEM01000020.1| GENE 86 88087 - 88398 401 103 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2223 NR:ns ## KEGG: GALLO_2223 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 103 1 103 103 179 100.0 2e-44 MIIKTVTFEVKAAAKDKFEQKFRNDAISLKNWETCLGNEVWIQDNSDTNSVSFTAVSRWD NQDDFKAWLKRPEHIQHHKEQHFRKEDSPILKKSVQEYIVLED Prediction of potential genes in microbial genomes Time: Sun May 29 12:58:36 2011 Seq name: gi|304425344|gb|AEEM01000021.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00031, whole genome shotgun sequence Length of sequence - 57954 bp Number of predicted genes - 55, with homology - 53 Number of transcription units - 26, operones - 14 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 90 - 133 -0.7 1 1 Op 1 2/0.375 - CDS 166 - 624 555 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 2 1 Op 2 . - CDS 629 - 1075 458 ## COG1846 Transcriptional regulators - Prom 1263 - 1322 7.5 + Prom 1204 - 1263 13.3 3 2 Op 1 5/0.125 + CDS 1309 - 1635 324 ## COG1695 Predicted transcriptional regulators 4 2 Op 2 . + CDS 1622 - 2206 727 ## COG4709 Predicted membrane protein 5 2 Op 3 . + CDS 2203 - 3108 787 ## GALLO_2228 hypothetical protein + Term 3113 - 3155 10.8 - Term 3101 - 3142 10.6 6 3 Tu 1 . - CDS 3148 - 3501 362 ## COG3759 Predicted membrane protein - Prom 3630 - 3689 7.6 - Term 3662 - 3712 6.3 7 4 Tu 1 . - CDS 3721 - 6048 2530 ## COG1511 Predicted membrane protein - Prom 6089 - 6148 8.8 + Prom 6063 - 6122 7.2 8 5 Tu 1 . + CDS 6180 - 6722 460 ## COG1309 Transcriptional regulator - Term 7002 - 7031 1.2 9 6 Tu 1 . - CDS 7058 - 7714 1032 ## PROTEIN SUPPORTED gi|55821964|ref|YP_140406.1| 30S ribosomal protein S4 - Prom 7861 - 7920 9.6 - Term 7865 - 7909 2.7 10 7 Op 1 3/0.125 - CDS 7936 - 8208 373 ## COG4466 Uncharacterized protein conserved in bacteria 11 7 Op 2 16/0.000 - CDS 8247 - 9608 1596 ## COG0305 Replicative DNA helicase 12 7 Op 3 9/0.000 - CDS 9645 - 10097 633 ## PROTEIN SUPPORTED gi|71904530|ref|YP_281333.1| 50S ribosomal protein L9 13 7 Op 4 1/0.875 - CDS 10097 - 12073 675 ## PROTEIN SUPPORTED gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein - Prom 12093 - 12152 6.2 - Term 12095 - 12131 5.0 14 8 Tu 1 . - CDS 12160 - 14064 2163 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division - Prom 14151 - 14210 7.1 - Term 14182 - 14245 12.6 15 9 Op 1 . - CDS 14286 - 14924 488 ## COG0698 Ribose 5-phosphate isomerase RpiB 16 9 Op 2 . - CDS 14988 - 16109 1445 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain - Prom 16211 - 16270 8.2 + Prom 16265 - 16324 10.3 17 10 Op 1 9/0.000 + CDS 16348 - 17019 795 ## COG1760 L-serine deaminase 18 10 Op 2 1/0.875 + CDS 17031 - 17903 935 ## COG1760 L-serine deaminase 19 10 Op 3 . + CDS 18002 - 18637 554 ## COG0546 Predicted phosphatases - Term 18604 - 18653 8.2 20 11 Tu 1 . - CDS 18667 - 19320 842 ## GALLO_2243 transglycosylase-like domain protein - Prom 19388 - 19447 7.9 - Term 19462 - 19510 6.6 21 12 Tu 1 . - CDS 19527 - 20117 841 ## GALLO_2244 conserved hypothetical secreted protein - Prom 20159 - 20218 7.0 22 13 Op 1 34/0.000 - CDS 20250 - 21047 635 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 23 13 Op 2 15/0.000 - CDS 21040 - 21900 463 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 24 13 Op 3 2/0.375 - CDS 21858 - 22700 526 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 25 13 Op 4 5/0.125 - CDS 22697 - 23251 282 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 26 13 Op 5 3/0.125 - CDS 23261 - 24205 779 ## COG1426 Uncharacterized protein conserved in bacteria 27 13 Op 6 14/0.000 - CDS 24269 - 25558 960 ## COG0612 Predicted Zn-dependent peptidases 28 13 Op 7 . - CDS 25559 - 26803 920 ## COG0612 Predicted Zn-dependent peptidases - Prom 26865 - 26924 10.2 + Prom 26790 - 26849 9.6 29 14 Op 1 9/0.000 + CDS 26892 - 27269 310 ## PROTEIN SUPPORTED gi|15904072|ref|NP_359622.1| hypothetical protein spr2031 30 14 Op 2 . + CDS 27272 - 28366 1113 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) + Term 28371 - 28399 1.0 - Term 28352 - 28395 4.3 31 15 Tu 1 . - CDS 28429 - 29295 1270 ## COG4975 Putative glucose uptake permease - Prom 29407 - 29466 7.5 - Term 29470 - 29509 1.2 32 16 Tu 1 . - CDS 29535 - 31016 2136 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 31193 - 31252 8.0 - Term 31216 - 31263 10.2 33 17 Tu 1 . - CDS 31277 - 32299 1461 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 32319 - 32378 2.4 + Prom 32618 - 32677 10.8 34 18 Op 1 1/0.875 + CDS 32780 - 33652 990 ## COG1284 Uncharacterized conserved protein + Term 33669 - 33700 -1.0 + Prom 33655 - 33714 5.6 35 18 Op 2 2/0.375 + CDS 33737 - 35359 1872 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 35414 - 35452 7.9 + Prom 35377 - 35436 4.8 36 19 Tu 1 . + CDS 35544 - 38048 1692 ## COG4485 Predicted membrane protein - TRNA 38114 - 38187 76.3 # Asn GTT 0 0 - TRNA 38218 - 38289 64.7 # Glu TTC 0 0 + TRNA 38587 - 38660 80.6 # Arg TCT 0 0 37 20 Op 1 . - CDS 38665 - 38751 128 ## 38 20 Op 2 . - CDS 38801 - 39280 542 ## COG1576 Uncharacterized conserved protein - Prom 39496 - 39555 10.2 + Prom 39392 - 39451 11.5 39 21 Op 1 2/0.375 + CDS 39491 - 40756 1642 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 40780 - 40816 1.1 40 21 Op 2 . + CDS 40826 - 41602 778 ## COG1475 Predicted transcriptional regulators + Term 41684 - 41718 5.5 + Prom 41708 - 41767 12.4 41 22 Op 1 16/0.000 + CDS 41806 - 43161 1270 ## COG0593 ATPase involved in DNA replication initiation + Term 43222 - 43252 1.1 + Prom 43238 - 43297 3.1 42 22 Op 2 . + CDS 43319 - 44455 1537 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) + Term 44531 - 44572 9.5 + Prom 44457 - 44516 5.3 43 23 Op 1 . + CDS 44586 - 45470 611 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 44 23 Op 2 4/0.125 + CDS 45482 - 45676 167 ## COG4481 Uncharacterized protein conserved in bacteria + Prom 45719 - 45778 6.8 45 24 Op 1 14/0.000 + CDS 45810 - 46925 1775 ## COG0012 Predicted GTPase, probable translation factor + Term 46948 - 46986 5.1 46 24 Op 2 7/0.000 + CDS 47003 - 47572 591 ## COG0193 Peptidyl-tRNA hydrolase 47 24 Op 3 . + CDS 47577 - 51077 3469 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Prom 51083 - 51142 3.1 48 25 Tu 1 . + CDS 51379 - 51729 333 ## GALLO_0008 putative transcriptional regulator + Term 51757 - 51800 -0.9 + Prom 51790 - 51849 1.5 49 26 Op 1 5/0.125 + CDS 51869 - 52141 377 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 50 26 Op 2 . + CDS 52128 - 52499 409 ## COG2919 Septum formation initiator 51 26 Op 3 . + CDS 52414 - 52620 170 ## 52 26 Op 4 3/0.125 + CDS 52636 - 53922 1416 ## COG2367 Beta-lactamase class A 53 26 Op 5 10/0.000 + CDS 53927 - 55192 995 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 54 26 Op 6 11/0.000 + CDS 55197 - 55739 718 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 55 26 Op 7 . + CDS 55761 - 57743 1315 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 57776 - 57807 3.4 Predicted protein(s) >gi|304425344|gb|AEEM01000021.1| GENE 1 166 - 624 555 152 aa, chain - ## HITS:1 COG:CC3149_2 KEGG:ns NR:ns ## COG: CC3149_2 COG0454 # Protein_GI_number: 16127379 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Caulobacter vibrioides # 43 147 2 108 114 60 31.0 8e-10 MKVVPYDEKYKKDFVEMNLAWISEMFTVEAEDERELTNIEHYIENGGQIFFALNDEGAVM ASCMVAPREDGDWEIMKFAAKSEFAGSGAGSACLKACIEYAESLHLPKLIIVSNRKCLSA VHLYRKFGFTEIPVDKERFPFERGDIAFEKEL >gi|304425344|gb|AEEM01000021.1| GENE 2 629 - 1075 458 148 aa, chain - ## HITS:1 COG:BS_ybfA_1 KEGG:ns NR:ns ## COG: BS_ybfA_1 COG1846 # Protein_GI_number: 16077285 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 11 139 13 141 141 99 39.0 2e-21 MPDRETIYAIRAFNRMYMPFMNLLGNHYLGSEYSVTEARIFFEIYENEGCTATHIAQEMN IDKSYLSRILKNHEKKGYIYRQTSKEDGRAYHLFLTDAGKLRARDFIEKSNQEIGDIIAT LSYSEQKQLAEAMTLITKILGKNSVQGE >gi|304425344|gb|AEEM01000021.1| GENE 3 1309 - 1635 324 108 aa, chain + ## HITS:1 COG:SPy2172 KEGG:ns NR:ns ## COG: SPy2172 COG1695 # Protein_GI_number: 15675909 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 107 1 107 108 149 76.0 1e-36 MYFPTSATVIEFLILAIVDKDDSYGYAISQTIKQIANIKESTLYPILKKLEKAGYLTTYQ QAYQGRKRKYYAITAAGKEQLTFLKKEWQRYKEKVDEIIEGRLEDDKS >gi|304425344|gb|AEEM01000021.1| GENE 4 1622 - 2206 727 194 aa, chain + ## HITS:1 COG:SPy2173 KEGG:ns NR:ns ## COG: SPy2173 COG4709 # Protein_GI_number: 15675910 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 191 1 191 195 156 45.0 3e-38 MTKVEYLAKLDKYLRKLPKEDYQEAMDYFSEYFEEAGPENEAQVIAELGTPKEAARDIIS RLLDEKIIDQEKTPKSRVSMVWLAILAVIITPVALPLALVLFLAVITILALGVAAIAVVL SLGVAFLTSGIYMLFDSWSYLNISFSATALSFGLGLLALGLSLLTLLAAGAVCKVVGRSI VNLARKTENKRRKL >gi|304425344|gb|AEEM01000021.1| GENE 5 2203 - 3108 787 301 aa, chain + ## HITS:1 COG:no KEGG:GALLO_2228 NR:ns ## KEGG: GALLO_2228 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 301 1 301 301 435 100.0 1e-120 MKSWTKTILGIGISCSLLGAALAGYGFATGGLSDLENSTDIVGNVNYQKANLDSFSKIDI DSTTSDIIISKANIDKPFISYSDNKKTPVNYEVKDDTLTVKQTGTRTQLGNANIHFLSLR DIIDIAKTGIIENSHTIVISVPQDTDLTSVKANLSSGDLDISQLSLDTATLKLLAGELTL TNTTLNSGTVNITSGDAEIENSNLANIAFSITTGDIDLENSQASNTTFELSMGDFSANAA TFKNDNTITMTTGEVDITLASKDLKVLMTNLLGDADITSNLNQSSKNTLTIDGNVGDITV Q >gi|304425344|gb|AEEM01000021.1| GENE 6 3148 - 3501 362 117 aa, chain - ## HITS:1 COG:L101688 KEGG:ns NR:ns ## COG: L101688 COG3759 # Protein_GI_number: 15673453 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 117 1 119 119 108 64.0 2e-24 MSLITIILSLLVALEHFYIMYLETVATQSPVTARVFGLSQEELERESVSNLFKNQGVYNG LIAVFLIYGIFTANATLVTVFLVNVVLVALYGSLTADRKIILKQGGLAILALLTLLF >gi|304425344|gb|AEEM01000021.1| GENE 7 3721 - 6048 2530 775 aa, chain - ## HITS:1 COG:SPy2176 KEGG:ns NR:ns ## COG: SPy2176 COG1511 # Protein_GI_number: 15675912 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 773 1 756 757 704 56.0 0 MLEELKALIKSPKLWVTMIGVALIPALYNLSFLGSMWDPYGNVDDLPVAVVNQDKSSTLN DQTLSIGDDMVDSMSKNKALDYHFVSAEKAEEGLENGDYYMVITLPEDLSEKAASLLTDD PEKLTINYQTTAGRSFVASKMSESAMTKLKDTVSENITETYTKAVFKSMSSLQDGLQEAS DGGNELLSGSQQLESGSQTITDNLNTAASGSQTLADGTATLSSGLTTYTNGVSSLASGAN ELDSNSAALVSGVAQLKESSAQVQQLVDGANSLTDGLQKLATATTLSAEESANIQSLISG LPQLNAGIQQLNASVSEISTEVDTTKISTALSDIASQAQGIVKAEEKDSSARLTAIKETA AYQSLDATQQAELVNALNTSGNSVSQQAQQILTDVQTMKTALTELSSLSSKVTELQTGVS QIANQSNVALPGAVTALTTLSTGLNQVNTAATTQLVPGSSQIASGISTLNTKLSSGASEL LTGVTTYTSGVSQVASGANQLAASNSQLTSGASQLQSGAEELASGSSQLAAGSDTLTSGL TTLTSGISTLTSSLSEASDQLSLVSVTNKNAKLVSNPVSTKETDNDSVKVNGIGMAPYMI AVSLMVVALSTNVIFASSLSGRPVKNRFEWAKQKLFINGLISTVGSLVLYGAIQFLGFEA NYEWKTILLIILGGWTLMALVTALVGWDNRYGSFLSLIMLLLQVGSAGGSYPIELSPKFF QVVHPYMPMTYIVTGLRQTISMTGSIGTQVGVLSAFLVAFMVLGLIIYRQPKTEN >gi|304425344|gb|AEEM01000021.1| GENE 8 6180 - 6722 460 180 aa, chain + ## HITS:1 COG:SPy2177 KEGG:ns NR:ns ## COG: SPy2177 COG1309 # Protein_GI_number: 15675913 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 5 176 3 174 177 230 72.0 9e-61 MANDNRRANTKKAIQEAMVTLLKTESFDDITTIKIAKEAGISRSSFYTHYKDKFELIDSC QQTLFNQVEYIFEKHEGNKEQAFLEIFEFLKREQLLSALISANGTREFQAFIINKVRIFI NTDFQNRFGREELSPVEKEYSSIYFAYAFFGLCQSWIANGKKESPRQMTNLILKLLPLSL >gi|304425344|gb|AEEM01000021.1| GENE 9 7058 - 7714 1032 218 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55821964|ref|YP_140406.1| 30S ribosomal protein S4 [Streptococcus thermophilus LMG 18311] # 1 218 1 217 217 402 92 1e-111 MLFPTKFLFYRRTFLMSRYTGPSWKQSRRLGLSLTGTGKELARRNYVPGQHGPNNRSKLS EYGLQLAEKQKLRFTYGVGEKQFRNLFVQATKIKGGTLGFNFMVLLERRLDNVVYRLGLA TTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSAKVPAILEAVEATLGHPAF VSFDAEKLEGSLTRLPERDEINPEINEALIVEYYNKML >gi|304425344|gb|AEEM01000021.1| GENE 10 7936 - 8208 373 90 aa, chain - ## HITS:1 COG:SPy2181 KEGG:ns NR:ns ## COG: SPy2181 COG4466 # Protein_GI_number: 15675916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 90 1 90 90 143 86.0 8e-35 MSDAFADVAKMKKIKEDIKAHEGQLVELTLENGRKREKNKVGRLTEVYPSLFIVEYNENS DVPGAINNSYVESYTYSDILTEKTLIRYFD >gi|304425344|gb|AEEM01000021.1| GENE 11 8247 - 9608 1596 453 aa, chain - ## HITS:1 COG:SPy2182 KEGG:ns NR:ns ## COG: SPy2182 COG0305 # Protein_GI_number: 15675917 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Streptococcus pyogenes M1 GAS # 1 453 3 455 455 755 88.0 0 MAEEPELRVQPQDLLAEQSVLGSIFISPDKLITVREYISPDDFYKYSHRVIFKAMITLSD RNEAIDATTVRTILDDQGDLQNIGGLSYIVELVNSVPTSANAEYYAKIVAEKAMLRNIIS RLTETVNLAYEGATDSEDVIAGAEKALVEINEHSNRSGFRKISDVLKVNYENLEIRSRQT SDVTGLPTGFRDLDKITTGLHPDQLIILAARPAVGKTAFVLNIAQNVGTKQNKPVAIFSL EMGAESLVDRMLAAEGMVDSHHLRTGQLTDQEWNNITIAQGALAEAPIYIDDTPGIKITE IRARARKLSQEVEGGLGLIVIDYLQLITGTRPENRQQEVSDISRQLKILAKELKVPVIAL SQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDYYRREGEENDDAVEDNTIEV ILEKNRSGARGTVKLIFQKEYNKFSSIAQFEER >gi|304425344|gb|AEEM01000021.1| GENE 12 9645 - 10097 633 150 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|71904530|ref|YP_281333.1| 50S ribosomal protein L9 [Streptococcus pyogenes MGAS6180] # 1 150 1 150 150 248 84 6e-65 MKVIFLADVKGKGKKGEIKEVPTGYAQNFLIKKNLAKEATNQAIGELKGKQKSEEKAQAE ILAEAQALKAELEKEATVVKFTEKVGPDGRTFGSITAKKIAEELAKQFGLKINKRSIELD HPIRAIGSVEVPVKLHKEVTAEIKLSIKEA >gi|304425344|gb|AEEM01000021.1| GENE 13 10097 - 12073 675 658 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein [Aster yellows witches'-broom phytoplasma AYWB] # 44 657 79 702 849 264 27 4e-87 MKRFRFATIHLVMIGLILFGILAICVRLFQTESAILAAIFLALSLLVALLYYQKETYELS ELEQIELLNDQTEVSLKSLLEQMPVGVVQFEQSTNEVEWFNPYAELIFTSEEGEFEDELI QKIIGNKREGDASQTFELNGNKYSSYIDSSSGIFYFFDTSMGNRQLGDAALLRPVIGIIS IDNYDDVTDDLSDAEISQINSFIANFISNFTKSKNIFYRRVDMDRFYFFTDYAVLSSLID DKFTVLEAFRKQAKEERELPLTLSMGVAYGDDNHQQIGQVALQNLNTALVRGGDQVVICE NDEHKKPLYFGGGSVSTVKRTRTRTRAMMTAISDHIKNVDRVFVVGHRNLDMDALGSAIG MQFFASNVIEEAYAVYNPDEMSPDIARAVKRLQEDGKTHLISVNQALQLVTSQSLLIMVD HSKIDLTLSQELYNRFTDVIVVDHHRRDNNFPEKAILTFIESGASSASELVTELIQFQNA GKRLSKIQASILMAGIMLDTKNFSASVTSRTFDVASYLRSQGSDSIEIQNISQTDFEEYR LVNELILKGRKLYDNIIIASGGDNVVYSKVVASKAADTMLSLAGIEATFVIVQVAPNKVA ISARSRSKINVQRMMEELGGGGHFTLAACQLSDITVSQAEHLLLEIIENDLRENMEVE >gi|304425344|gb|AEEM01000021.1| GENE 14 12160 - 14064 2163 634 aa, chain - ## HITS:1 COG:SPy2185 KEGG:ns NR:ns ## COG: SPy2185 COG0445 # Protein_GI_number: 15675920 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Streptococcus pyogenes M1 GAS # 1 631 1 631 632 1125 87.0 0 MTHEFAENYDVIVVGAGHAGVEASLAAARMGCKTMLATINLEMLSFMPCNPAIGGSAKGI VVREIDALGGEMGKNIDRTYIQMKMLNTGKGPAVRALRAQADKALYSRTMKHTVEQQENL TLRQSMIEEVLVEDGKVVGVRTATNQKFSAKAVVITTGTALRGEIILGELKYSSGPNNSL ASIGLADNLKELGLEIGRFKTGTPPRIKASSINYDETEIQPGDEKPNHFSFMSNDEDYLK DQIPCWLTYTNQTSHDIINKNLYRAPMFSGIVKGVGPRYCPSIEDKIVRFADKERHQLFL EPEGRETEEVYIQGLSTSLPEDVQKELIHSIKGLENAEMMRTGYAIEYDIVLPHQLRATL ETKKISGLFTAGQTNGTSGYEEAAGQGIVAGINAALKVQGKPEMILKRSDAYIGVMIDDL VTKGTLEPYRLLTSRAEYRLILRHDNADMRLTEIGHRVGLVDDERYQRFLNRKRQFDNEL TRLSTLKIKPVKETNARIEALGFKPLTDALTAKEFMRRPEINYDIATSFVGPAEEKLDSK VIELLETEIKYEGYINKALDQVAKMKRMEEKRIPANIDWDDIDSIATEARQKFKKINPET IGQASRISGVNPADISILMVYLEGKQKHHRKVND >gi|304425344|gb|AEEM01000021.1| GENE 15 14286 - 14924 488 212 aa, chain - ## HITS:1 COG:CAC2606 KEGG:ns NR:ns ## COG: CAC2606 COG0698 # Protein_GI_number: 15895864 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Clostridium acetobutylicum # 1 208 1 210 213 152 34.0 3e-37 MRVGVIQASTRSDINDLLFQSVQKAVKGLHEVVNFGMFPNETANFSYVEVAVMVSLLIET QSLDFVVTGCSSGQGMMLACNSLPGLRCGFIQTPQDAYLFGRINNGNVVSLPLGLNFGWS GELNLQYTLDKLFEDEFGCGYPKEDAERKRQDADNLVKLATITKRSFSDILDQLDQNLLR KILCRESFYNYLMTNGKNQLLLEKLSAIKLTF >gi|304425344|gb|AEEM01000021.1| GENE 16 14988 - 16109 1445 373 aa, chain - ## HITS:1 COG:SPy2188 KEGG:ns NR:ns ## COG: SPy2188 COG0482 # Protein_GI_number: 15675922 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Streptococcus pyogenes M1 GAS # 1 373 1 373 373 679 91.0 0 MSDNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVA AVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLG ADYVATGHYAQVSRDEDGTVHMLRGADNNKDQTYFLSQLSQEQLQKVMFPLGHLEKPEVR KIAERAGLATAKKKDSTGICFIGEKNFKEFLSQYLPAQKGRMMTVDGRDMGEHAGLMYYT IGQRGGLGIGGQQGGDNQPWFVVGKDLSKNILYVGQGFYHDSLMSTSLDASSIHFTRDMP EEFTMEVTAKFRYRQPDSKVTVHVKGDKAEVVFDEPQRAITPGQAVVFYDGEECLGGGII DMAYKNGVACQYI >gi|304425344|gb|AEEM01000021.1| GENE 17 16348 - 17019 795 223 aa, chain + ## HITS:1 COG:SPy2189 KEGG:ns NR:ns ## COG: SPy2189 COG1760 # Protein_GI_number: 15675923 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Streptococcus pyogenes M1 GAS # 1 223 1 223 223 363 82.0 1e-100 MKNLKFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVNSIFGEIPDSVTFHLYNSFAKTYRG HGTDKALVAGILGIDTDNPDIKNSLEIAHQKGIRIYWDILKDSNAPHPNTAKITVEKGDK SMSITGVSIGGGNIEVTELNGFSVSLKMNTPTLIIVHQDIPGMIAKVTDILSEHHINIAQ MNVTRERAGEKAIMIIEVDSRDCHKAVEQIQQIPHLHNVNFFD >gi|304425344|gb|AEEM01000021.1| GENE 18 17031 - 17903 935 290 aa, chain + ## HITS:1 COG:SPy2190 KEGG:ns NR:ns ## COG: SPy2190 COG1760 # Protein_GI_number: 15675924 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 427 83.0 1e-119 MFYSIKELVEQADKDFNGNIAELMIATEMELSGRSRDEIIHIMTKNLQVMKNSVTDGLTP SKSISGLTGGDAVKMDTYLKSGKTLSDTTILTAVRNAIAVNELNAKMGLVCATPTAGSAG CLPAVLTTAIDKLKLSEEEQLNFLFTAGAFGLVIGNNASISGAEGGCQAEVGSASAMSAA ALVKAAGGSAFQASQAVAFVIKNMLGLICDPVAGLVEVPCVKRNALGSSFALVAADMALA GIESQIPVDEVVDAMYQVGASLPTAFRETAEGGLAATPTGRRLQAQIFGE >gi|304425344|gb|AEEM01000021.1| GENE 19 18002 - 18637 554 211 aa, chain + ## HITS:1 COG:SP0104 KEGG:ns NR:ns ## COG: SP0104 COG0546 # Protein_GI_number: 15900047 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Streptococcus pneumoniae TIGR4 # 1 204 4 205 210 173 44.0 2e-43 MKSILFDLDGTLVNSSPGIKAAFNYAFEKLQLPLQSDKQLSTFIGPPLEVTFANYFTEKA DIDHAIKTFREYYNAKGVHQVSLYAGISDLLKELNDLGYSLYVTTSKHEPMAKLMLTELG VISNFKQVYGSTPEHFHKADVINACLTEQVIQAAEAVIIGDTKFDMIGGQKTGVRRLGIT WGFGSAESLQEHGAEIICHQPQDIKKALSSL >gi|304425344|gb|AEEM01000021.1| GENE 20 18667 - 19320 842 217 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2243 NR:ns ## KEGG: GALLO_2243 # Name: not_defined # Def: transglycosylase-like domain protein # Organism: S.gallolyticus # Pathway: not_defined # 1 217 1 217 217 225 100.0 1e-57 MYSRIAKAKQRKIRNIIVSVLGATLSLAMIIFLIPKIELFSDTFTTHAEAEVVKSTSTSL SSTLNQTVTSTTSSESSSAEVSEVSEEPATEEATEVEEVYTESEEPVVEDTTATESASYT TTSSEVVDATTASNGNTAGTVGTEAAAQMAAATGVPQSTWEAIIARESNGDPSVTNASGA SGLFQTMPGWGSTATVQDQITAAINAYNAQGLSAWGY >gi|304425344|gb|AEEM01000021.1| GENE 21 19527 - 20117 841 196 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2244 NR:ns ## KEGG: GALLO_2244 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: S.gallolyticus # Pathway: not_defined # 1 196 1 196 196 189 100.0 3e-47 MQKNTLKSKSKTIKLGVASAAFAAALIAPAVANADSYTVKSGDTLSEIASTYNTTVEQLA SLNSISNVDFITVGQVLELDSTASTTETTTSAATTDDSSSATSTAASTDTTTTSTTYSSN LSSADAAAKETIAQRESSGSYTAQNGQYYGRYQLTISYLNGDLSAENQERVADAYVASRY GSWSAALAFWNANGWY >gi|304425344|gb|AEEM01000021.1| GENE 22 20250 - 21047 635 265 aa, chain - ## HITS:1 COG:SPy2193 KEGG:ns NR:ns ## COG: SPy2193 COG0619 # Protein_GI_number: 15675926 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 1 249 1 249 266 356 85.0 2e-98 MDKLILGRYVPGNSLIHRLDPRSKLLAMILYIVIVFWANNVVTNIIMVAFTLIVVLLSKI KLSFFLKGVQPMIGIILFTTLFQMFFIQGGQTYFQFGFLKITSYGFSQAVLIFMRFVLII FFSTLLTLTTTPLSLADAVESLLKPFVRFKVPAHEIGLMLSLSLRFVPTLMDDTTRIMKA QRARGVDFGEGNLIQKVKSIIPILIPLFASSFKRADALALAMEARGYQGGDGRTKYRILQ WHLKDTLALIVLVILGILLFWLKKS >gi|304425344|gb|AEEM01000021.1| GENE 23 21040 - 21900 463 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 1 277 116 390 398 182 39 3e-45 GIRRSVMGITLESVNYTYQAGTPFEGRALFDINLSIKEGSYTAFIGHTGSGKSTIMQLLN GLNVPTEGTVIVDDIKITADSKNKDIKPVRKKVGLVFQFPESQLFEETVLKDVAFGPQNF GVSIEEAEQLAREKLAMVGISEEFFEKNPFELSGGQMRRVAIAGILAMEPEVLVLDEPTA GLDPKGRRELMDLFKKLHQNGMTIVLVTHLMDDVANYADYVNVLEGGKLVRSGYPKEVFQ DVDFLESKQLGVPKITKFAQQLVKRGLQLESLPITIEEFAEVVKHG >gi|304425344|gb|AEEM01000021.1| GENE 24 21858 - 22700 526 280 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 24 256 147 379 398 207 46 1e-52 MTLNSIDVKHLKFKYDDNQDNYTLDDLSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLAA ESGDIFVENELLTEENVWNIRQKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPLEEMQS RVKEALQLVGMSDFADREPSRLSGGQKQRVAIAGAIAMRPNIIILDEATSMLDPEGRLEL IQTIKEIRDQYNMTVISITHDLDEVALSDRVLVMKRGKVESSSTPRELFARGEELLTLGL DIPFSANLISTLKNKGFEFTENYLTEKELEDQLWELLLKA >gi|304425344|gb|AEEM01000021.1| GENE 25 22697 - 23251 282 184 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 13 175 484 665 904 113 39 3e-24 MKIDFTKKENIPNLLTLGRIVMIPLFILILCFWKSSTGHVVAAIVFALASITDYLDGYLA RKWQVVTNFGKFADPLADKMLVMTAFIMLVELKMVPAWIAAIIICRELAVTGLRLLLVEN GGTVLAAAMPGKIKTFTQMFSIIFLLCHFSIIGTLLLYVALIFTIYSGYDYFKGAGFLFK DTFK >gi|304425344|gb|AEEM01000021.1| GENE 26 23261 - 24205 779 314 aa, chain - ## HITS:1 COG:SPy2197 KEGG:ns NR:ns ## COG: SPy2197 COG1426 # Protein_GI_number: 15675930 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 314 1 341 341 148 33.0 2e-35 MREQTIGEILREARVAKHLTLEEVEEKTAIPSPHLLALELEQFKLIPKDKIETYLQQYSE AVELDTADLLEKYHEQEVDSSDEEQEEHVVESTTTNTESIVKTPQDETISIAKSASDDSF IIGSRSSRYKGKEKTNSYLPIVMLCLVALGILAFVSFVTWNQLQSDSNNASTSYSVVHSS SSTTTDSTSSESSSSTSESSSSEEDTSLKMSTEGSGNSLTVNLSNVTDSLTVEISLSGAD SSWVSVTNSESNDSGTLLSSTGTTSYTAVLPSGTTSSLITLGVTEGVTVTIDGQEVDTSA LTSTTLSYITINIQ >gi|304425344|gb|AEEM01000021.1| GENE 27 24269 - 25558 960 429 aa, chain - ## HITS:1 COG:SPy2198 KEGG:ns NR:ns ## COG: SPy2198 COG0612 # Protein_GI_number: 15675931 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Streptococcus pyogenes M1 GAS # 1 429 1 429 429 376 47.0 1e-104 MTELKEQIFSEINEKIYSAELENGLKVFLIPKQDFQESCGMMIVNFGSLDTKFTHDGQSK EYNEGIAHFLEHKLFELEDGQDVAELFTNAGANSNAFTTFDKTCYYFSAVDNLEENVTLL QQFISETSFTEASITREKDIIGQEIDMYQDDADYRLYQGILENLYPNTALAQDIAGTQES IENISVADLKENHNIFYSPQEMTLLLVGNFDKDLLFNQIKKEQKEKASKKHVVKRQGLVY EQVVPKKNIQMGVTQPKLAIGYRGAQLPKGTSILRQELALRLFFTMLLGWTSKRYQQLYE SGQIDDSFDFEIEVCPDFQFLIISLDTLEPIAMANNIRQYLNKVSQSSDLDDLSEEHFKI VKKELYGDFFKSLDSIDNLSAQFINHLSEDETYLDVPKILATLDFAEVLKIGNDFLAHAD ATEFTILPK >gi|304425344|gb|AEEM01000021.1| GENE 28 25559 - 26803 920 414 aa, chain - ## HITS:1 COG:SPy2199 KEGG:ns NR:ns ## COG: SPy2199 COG0612 # Protein_GI_number: 15675932 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Streptococcus pyogenes M1 GAS # 1 413 1 413 414 431 54.0 1e-120 MKLVEGVELHLIKSEKFKMNHLTFRFSGDFSQKTVARRVLVAQILATANAEYPTAQRFRE RLASLYGATLSTKVSTKGLVHIVDIELAFIKNQFVMTDENLLEEMIDFLYQNLFSPLVTV EQYQSKLFNIEQTNLINYLNADKDDSFYSSELGLKKLFYEDSAFQTSKYGTAELVAAENS YTAFQEFQKMLREDRLDIFLLGEFDDYRMLQLFNRFPFEERHKDLVFDYQQEFTNVIRQQ FETKDVNQSVLQLGYHFPIRYQDEEYFTLLVFNGLFGGFAHSRLFTELREKEGLAYTIGS QFDIYTGLLNVYAGIDKKNRNKTLQLINKQFSDIKMGRFSESLLKQTKKMLKVNLKLSCD SPRVIIERDYNHQYLTGNFSVDKIIDKIDNVSKEDVLKLTRKVKLQALYFLEGK >gi|304425344|gb|AEEM01000021.1| GENE 29 26892 - 27269 310 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15904072|ref|NP_359622.1| hypothetical protein spr2031 [Streptococcus pneumoniae R6] # 1 124 1 121 122 124 50 2e-27 MEYKLFDDYITLQALLKELGIIQSGGAIKGYLAETTVLFNGQDEKRRGKKIRIGDTITIP EENVEIQIIEPTSAEKQEHLEAIAEKERVTAIVKELNQKNKKVKKQNQGKTKQTNERKPV RFPGT >gi|304425344|gb|AEEM01000021.1| GENE 30 27272 - 28366 1113 364 aa, chain + ## HITS:1 COG:SPy2204 KEGG:ns NR:ns ## COG: SPy2204 COG1195 # Protein_GI_number: 15675937 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Streptococcus pyogenes M1 GAS # 1 362 1 362 368 504 72.0 1e-142 MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKEL IHFDAKELLVSGILQRSSGTVPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPED LQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQRNTYLKTAEKVDTDFLAVLDE QLADFGSRVMEHRLDFISNLEKEADRYHYAISNGVEHLSIHYLSSVSFQEKDDIKPNFLK ALQKNHQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKTVT GDYPILLLDDVMSELDNYRQTELLKMIIDKNVQTFITTTSLDHLSQLPDELKIFTVNQGN IQEN >gi|304425344|gb|AEEM01000021.1| GENE 31 28429 - 29295 1270 288 aa, chain - ## HITS:1 COG:SPy2205 KEGG:ns NR:ns ## COG: SPy2205 COG4975 # Protein_GI_number: 15675938 # Func_class: G Carbohydrate transport and metabolism # Function: Putative glucose uptake permease # Organism: Streptococcus pyogenes M1 GAS # 11 287 1 277 277 353 69.0 3e-97 MQGILYALIPMVAWGSIGFVSNKIGGKPDQQTLGMTIGALLFAFVVWLFVQPEMSVSLWV FGIIGGMLWSMGQNGQFRAMQYMGVSVGNPLSSGAQLVFGSLIGAIVFGEWSKPVQYTLG IIALLLLVIGFYFTSKQDAEKDETSELTDFGKGFRALTYSTVGYLSYTILFNNIMKFDAL AVIFPMAVGMVIGAIMFMKFNVKFETVVIKNAIVGLMWGVGNIFMLLAAAKAGLAIAFSF SQLGVVISIMGGILFLGETKTRKETRWLAIGIACFVLGAVLLGIVKSY >gi|304425344|gb|AEEM01000021.1| GENE 32 29535 - 31016 2136 493 aa, chain - ## HITS:1 COG:SPy2206_3 KEGG:ns NR:ns ## COG: SPy2206_3 COG0516 # Protein_GI_number: 15675939 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Streptococcus pyogenes M1 GAS # 208 493 1 286 286 510 95.0 1e-144 MSNWDTKFLKKGYTFDDVLLIPAESHVLPNEVNMQTKLAKNLTLNIPIVTAAMDTVTDSK MAIAIARAGGLGVVHKNMSIQEQAEEIRKVKRSENGVIIDPFFLTPKHSVSEAEELMQRY RISGVPIVETLENRKLVGIITNRDMRFISDYHTPISKHMTSEKLVTAPVGTDLETAERIL HEHRIEKLPLVDEAGRLSGLITIKDIEKVIEFPNAAKDEFGRLLVAGAVGVTSDTFERAE ALFEAGADAIVIDTAHGHSAGVLRKIAEIRQHFPERTLIAGNVATAEGARALYEAGVDVV KVGIGPGSICTTRVVAGVGVPQITAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGG NAVMLGSMFAGTDEAPGETEIYQGRKFKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVP EGIEGRVAYKGAVADIVFQMLGGIRAGMGYVGAEDILALHEKAQFVEMSGAGLIESHPHD VQITNEAPNYSVH >gi|304425344|gb|AEEM01000021.1| GENE 33 31277 - 32299 1461 340 aa, chain - ## HITS:1 COG:SPy2207 KEGG:ns NR:ns ## COG: SPy2207 COG0180 # Protein_GI_number: 15675940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 340 1 340 340 625 90.0 1e-179 MVKPIILTGDRPTGKLHLGHYVGSLKNRVLLQNENKYDMFVFLADQQALTDHAKESEIIR ESVGNVALDYLSVGLDPAKSTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKTEIAQK GFGSSIPTGFLVYPISQAADITAFKANYVPVGNDQKPMIEQTREIVRSFNHTYKTDVLVE PEGIFPENEAAGRLPGLDGNAKMSKSLGNGIYLSDDADTVRKKVMSMYTDPNHVRVEDPG QIEGNMVFHYLDIFGREEDQADISAMKEHYQRGGLGDVKTKRYLLDILERELAPIRERRL EYAKDMGEVFRMLEKGSEAAREVAGQTLSEVKAAMGINYF >gi|304425344|gb|AEEM01000021.1| GENE 34 32780 - 33652 990 290 aa, chain + ## HITS:1 COG:SPy2209 KEGG:ns NR:ns ## COG: SPy2209 COG1284 # Protein_GI_number: 15675941 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 325 61.0 7e-89 MKKKLIDFGLVTVGAFIAAIGFNSFFLENHIASGGVVGLAVSLKALFGWNTGNFVMISNF PLLIACWLFLGKETFVKTVYGAWIYSIFVKLTEGVPNLTDNPLLAALFGGIICGFGLGVV FWGNSSTGGTGIITQILHKYTPLPLAVAMTIVDGCSVAMGFVAFDIDTVMYSIIALITIG YVVNSMQLGVTSSRNIMIVSPKNDLIKHYISTKADRGVTEIPVTGGYSGENHTMLMTTVS RQEVPRLEKNIQKIDETAFIVVMPATQVMGRGFSLKKYYKLDEKDIILPM >gi|304425344|gb|AEEM01000021.1| GENE 35 33737 - 35359 1872 540 aa, chain + ## HITS:1 COG:SPy2210 KEGG:ns NR:ns ## COG: SPy2210 COG0488 # Protein_GI_number: 15675942 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 539 1 539 539 966 93.0 0 MLTVSDVSLRFSDRKLFDEVNINFTAGNTYGLIGANGAGKSTFLKILAGDIEPTTGHVSL GPDERLSVLRQNHFDYEEERAIDVVIMGNERLYNIMKEKDAIYMKPDFSDEDGVRAAELE SEFAELGGWEAESEASQLLQNLNIPEDLHYQNMSELANGDKVKVLLAKALFGKPDVLLLD EPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLYVGNYDFW KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPS SRKYPFINFKAERELGKDLLTVENLSVKIDGETVLDNISFILRPGDKTAFIGQNDIQTTA LIRALMDDIEYEGTIKWGVTTSRSYLPKDNSRDFASGESILEWLRQFASKEEDDNTFLRG FLGRMLFSGDEVNKSVSVLSGGEKVRVMLSKLMLLKSNVLVLDDPTNHLDLESISSLNDG LKDFKESIIFASHDHEFIQTLANHIVVISKNGVIDRIDETYDEFLENEEVQAKVKELWKD >gi|304425344|gb|AEEM01000021.1| GENE 36 35544 - 38048 1692 834 aa, chain + ## HITS:1 COG:SPy2211 KEGG:ns NR:ns ## COG: SPy2211 COG4485 # Protein_GI_number: 15675943 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 818 27 845 858 785 53.0 0 MSEDISFNSDTTILASDGFHQYVIFAENLRNILQGSDSIFYTFTSGLGLNFYALISYYLG SFFSPFVYFFSLKSMPDAIYIFTLLKVACMGISCFYSLRQLYPKVLKPFSIVLSTSYALM SFAISQIEINMWLDVFILLPLIILGINRLLGQQKFILYYLSLTILFIQNYYFGYMVVIFL ILYFLVQLTKEFKWKVILRKFIDFTVVSISAGLSSCIMLLPTYLDLSTHGEEFSKFTEWF TDASWFFDLFAKNFVGSYDTTKFGSIPMIYVGIFPLILAIIFFTIKSIRWQTRLAYGIML ALIVASFYLEPLDLIWQGMHSPNMFLHRYSWTFSILIILLAAETLSHLKELTLKQYLIGI IPLALGFIVTALFQSHYDFLEPSQVIISFAFLAAYAIILISYVNKYLSFKLFVSFTLIFT IFEISLNTYYQIAALDSEWVFPSRQSYNRNLTDIDKLVNETQELNTTFYRTEELLPQTGN DSMKYNYNGISQFSSIRNTTSSSTLDRLGFKSTGTNLNLRYQNNTLLMDSLFAVKYNLSE TSVDKFGFNYVDGSGNVSLYENQYASQLAILMNGIYKDIDFGVNTLDNQTNFINNLTGLS EKYFTRLASQLTGGANLLNNRVTTTNDGQLTTSATYQVTVTANTQLYVSVPNITFSNDNS ESVQITVNGKTTEYTTDNAYSFFDLGYFEEGQTLDITFTFPENSQVSFNQPNFYALDLTS YQKAMAIIDNPDVTVTTDKNTVTATYKTDEDSSLFFTIPYDKGWTATQNGKKLTVSKAQD GFMKVDVKAGEGKVTLTYIPNGFKEGAYLSILGIILFLAYMIARRKYHLRIKAG >gi|304425344|gb|AEEM01000021.1| GENE 37 38665 - 38751 128 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSYYSFLVALFHVKHLLKIKKAGFEPT >gi|304425344|gb|AEEM01000021.1| GENE 38 38801 - 39280 542 159 aa, chain - ## HITS:1 COG:SPy2215 KEGG:ns NR:ns ## COG: SPy2215 COG1576 # Protein_GI_number: 15675944 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 159 1 159 159 223 71.0 1e-58 MKVKIIAVGKLKEKYLKDGIAEYGKRMSRFAKFEIVELADEKTPDNASAAQNQQIMEKEG ERILAKISERDYVIVLAIEGKQLSSEAFSQVIADATLRGYSDIVFVIGGSLGLADKVKKR ANLRLSFGLLTLPHQLMRLVLSEQIYRAFMIQQGSPYHK >gi|304425344|gb|AEEM01000021.1| GENE 39 39491 - 40756 1642 421 aa, chain + ## HITS:1 COG:SPy2216 KEGG:ns NR:ns ## COG: SPy2216 COG0265 # Protein_GI_number: 15675945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Streptococcus pyogenes M1 GAS # 18 420 5 406 407 426 66.0 1e-119 MKKIKLPKLPKLPKFNYKNWLKPLGVILVGFIAGIAGTILVLNMAGISITNVSGSSTKTT TSSVSYSNSNDTTKAVEKVQDAVVSVINYKSDSSSSTSDLYNQMFGNDSDSSSDSSSTDD LTVYSEGSGVIYKKDGDSAYVVTNNHVIDGAEQIEIMLADGTKVVGELVGADTYSDIAVV KISSDNVSTVAEFADSDKLTVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDDGE TISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVV SIINQLEENGQVIRPALGISMVNLSDLSTNAIAQLNIPTSVTSGVVVAAVQSGMPAEGNL EQYDVITAIDDQEVTSTSDLQSILYTHSVGDSVKVTFYRGTDKKTATIELTKTTQDLSSS N >gi|304425344|gb|AEEM01000021.1| GENE 40 40826 - 41602 778 258 aa, chain + ## HITS:1 COG:SPy2217 KEGG:ns NR:ns ## COG: SPy2217 COG1475 # Protein_GI_number: 15675946 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 258 14 268 268 251 57.0 1e-66 MPETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAG ERRLRASKMAGLTEIPAIIKNISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMT HEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQGHARVLLTLKNAEEQEKWYQK ILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV SLHFQSEEDLNRIINKLK >gi|304425344|gb|AEEM01000021.1| GENE 41 41806 - 43161 1270 451 aa, chain + ## HITS:1 COG:SPy0002 KEGG:ns NR:ns ## COG: SPy0002 COG0593 # Protein_GI_number: 15674251 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Streptococcus pyogenes M1 GAS # 1 451 1 451 451 740 84.0 0 MTENEQIFWSRVLELAKSQLKQATYEFFVLDARLIQIEQNTATIYLDPMKELFWDKNLKP IILTAGFEVYNAEIVVNYVFEEDLTNQTGVVTTSQTVPTTQKNTLPLVDSDLNTKYTFDN FVQGDENRWAFSASYAVADAPGTTYNPLFIWGGPGLGKTHLLNAIGNAVLQNNPNARVKY ITAENFINEFVIHIRLDTMEELKEKFRNLDVLLIDDIQSLAKKTLSGTQEEFFNTFNALY DNNKQIVLTSDRTPDHLDNLEQRLVTRFKWGLTINITPPDFETRVAILTNKTQEYNYIFP QDTIEYLAGQFDSNVRDLEGALKDISLVASIKKIETITVDVAAEAIRARKQDGPKMTVIP IDEIQSQVGKFYGVTVKEIKATKRTQDIVLARQVAMYLAREMTDNSLPKIGKEFGGRDHS TVLHAYNKIKNMLAQDDSLRIEIETIKNKIK >gi|304425344|gb|AEEM01000021.1| GENE 42 43319 - 44455 1537 378 aa, chain + ## HITS:1 COG:SPy0003 KEGG:ns NR:ns ## COG: SPy0003 COG0592 # Protein_GI_number: 15674252 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Streptococcus pyogenes M1 GAS # 1 378 1 378 378 556 81.0 1e-158 MIKFSINKSFFLQALNATKRAISTKNAIPVLSTIKIEVQNSNITLTGSNGQISIENTIPT SNENAGLLITSTGAVLLEANFFINIVSSLPDVTLDFEEIEHHQIVLTSGKSEITLKGKDV DLYPRLQEMATENPLVLETKLLKSIIAETAFAASIQESRPILTGVHMVLSDHKDFKAVAT DSHRMSQRKLTLENTSNDFNVVIPSKSLREFAAVFTDDIETVEVFFSDSQMLFRSDYISF YTRLLEGNYPDTDRLLTNAFETEVTFNTNALRSAMERAHLISNATQNGTVKLEIANNSVS AHVNSPEVGKVNEELDTIDQSGNDLTISFNPTYLIEALKALKSETVVIRFISPVRPFTLM PGDDAENFIQLITPVRTN >gi|304425344|gb|AEEM01000021.1| GENE 43 44586 - 45470 611 294 aa, chain + ## HITS:1 COG:L39484 KEGG:ns NR:ns ## COG: L39484 COG1597 # Protein_GI_number: 15673780 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Lactococcus lactis # 1 292 1 300 302 133 30.0 4e-31 MTLYIIANPHAGNHGAKQVISDIEKHHTSDICTLLTRYKNDELHQVERLLKTFDPEQDKL LIVGGDGTLSKVLYHLPANLPFAYYPVGSGNDFAHALGIVPNLDTLLASLTNQPKEITVY SYQEGLVLNSLDLGFAAWVVNQAANSTLKTVLNKCHLGKLTYVATAIQFLLKNPLQASVS LESSEGDNLTLDDHFFFSLANNTYFGGGIMIWPTATVYSENLECVYAKGETFFQRLTVLL SLVLKRHEKSSYLNHCSLKRVTVNFPKESLIEIDGEVVSLNEITLSPQKRYIYL >gi|304425344|gb|AEEM01000021.1| GENE 44 45482 - 45676 167 64 aa, chain + ## HITS:1 COG:SPy0004 KEGG:ns NR:ns ## COG: SPy0004 COG4481 # Protein_GI_number: 15674253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 63 1 63 65 104 77.0 4e-23 MYELGSHVEMKKPHACTIKATGKKANEWEVIRLGADIKIRCTNCDHIVMMSRHDFERKLK KVLS >gi|304425344|gb|AEEM01000021.1| GENE 45 45810 - 46925 1775 371 aa, chain + ## HITS:1 COG:SPy0006 KEGG:ns NR:ns ## COG: SPy0006 COG0012 # Protein_GI_number: 15674254 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Streptococcus pyogenes M1 GAS # 1 371 1 371 371 647 93.0 0 MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTELITP KKTVPTTFEFTDIAGIVKGASRGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGRED AFVDPLADIDTINLELILADLESVNKRYARVEKVARTQKDKDSIAEFNVLQKIKPVLEDG KSARTVDFTEEEQKIVKQLFLLTTKPVLYVANVDEDKVANPDDIEYVKQIREFAATENAE VVVISARAEEEISELDDEDKALFLEDLGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRA WTFKRGIKAPQAAGIIHSDFERGFIRAITMSYDDLIKYGSEKAVKEAGRLREEGKDYVVQ DGDIMEFRFNV >gi|304425344|gb|AEEM01000021.1| GENE 46 47003 - 47572 591 189 aa, chain + ## HITS:1 COG:SPy0007 KEGG:ns NR:ns ## COG: SPy0007 COG0193 # Protein_GI_number: 15674255 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 189 1 189 189 276 73.0 1e-74 MVKMIVGLGNPGSKYHETRHNIGFMAIDRLAKDFNVTFSEEKNFKAEVGSCFINGEKVYL VKPTTFMNNSGIAVHALLTYYNIDIEDFLVIYDDLDMEVGRIRLRQKGSAGGHNGIKSII AHTGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDQDDYITVTNTLEKVNEAVQFYLQEADF VKTMQKFNG >gi|304425344|gb|AEEM01000021.1| GENE 47 47577 - 51077 3469 1166 aa, chain + ## HITS:1 COG:SPy0008 KEGG:ns NR:ns ## COG: SPy0008 COG1197 # Protein_GI_number: 15674256 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Streptococcus pyogenes M1 GAS # 1 1162 1 1161 1167 1736 76.0 0 MNIIDLFSQNKLIQTWHSGVANLGRQLIMGLSGSSRALAIASAYQANEEKIVVITSTQNE VEKLASDLSSLIGEDKVYTFFADDVAAAEFIFASMDKAHSRLEALNFLQDNKQSGILITS LVGARVLLPNPEIYAESQLNFVVGEDYNLDKVVKVLSNVGYQKVSQVLNPGEFSRRGDIV DIYEMTADYPYRLEFFGDEVDGIRQFDAETQKSLSNIEQVTISPADELILSEEDFARASK AFETFLETAKDEQQQAYLSELYAATQEQYKHQDIRRFLSLFYAKEWTLLDYIPKGTPVFF DDFQKLVDRNAKFDLEVANLLTEDLQRGKAVSSLVYFADIYKDLRQYQPATFFSNFHKGL GNLKFDKLHNFTQYPMQEFFNQFPLLIDEVNRYQKSKATVLIQADSQHGLERLQENLHEY GLELPVVAADDLQAQQAQLVVGNLSNGFYFADEKIVLITEHEIYHKKIKRRIRRSNISNA ERLKDYNELSKGDYVVHHVHGIGKFLGIETIEIHGVHRDYLTIQYQGSSTISLPVEQIES LSKYVSADGKEPKINKLNDGRFQKTKQKVSKQVEDIADDLLKLYAERSQLKGFAFSPDDD LQREFDEDFAFVETEDQLRSIKEIKHDMEEDKPMDRLLVGDVGFGKTEVAMRAAFKAVKD HKQVAVLVPTTVLAQQHYTNFSERFENYPVTVDVLSRFRSKKEQNDTLDKLKKGQVDIII GTHRLLSKDVDFADLGLIIIDEEQRFGVKHKEKLKELKTKVDVLTLTATPIPRTLHMSML GIRDLSVIETPPTNRYPVQTYVLETNPGLIREAIIREIDRGGQVFYVYNRVDTIDQKVSE LQELVPEASIGFVHGQMSEIQLENTLMDFIDGVYDVLVATTIIETGVDISNVNTLFIENA DHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKILTEVSEKRLDAIKGFTELGSGFKIAMR DLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAIAKKQGKFQARRKSNAEMNLQIDAYL PSEYIDDERQKIEIYKRIREIESQKDYQSLQDELIDRFGEYPDQVAYLLEIGLVKAYMDN AFTELVERKDNNLLVRFEKASLQHYLTQDYFEALSKTNLKARIGENQGKIEITFNIRDKK DYEILEELQNFGKMLAEIKSRKIEKD >gi|304425344|gb|AEEM01000021.1| GENE 48 51379 - 51729 333 116 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0008 NR:ns ## KEGG: GALLO_0008 # Name: not_defined # Def: putative transcriptional regulator # Organism: S.gallolyticus # Pathway: not_defined # 1 116 60 175 175 207 100.0 8e-53 MKHQVDQSQFKKWLIIGGISWFLFSVAVPTRYLLDSGQATAILWLLAMPVAYSAFQILYI LKNRELQTYADILNFLNPKKNVKTSILSELWFVVSVIVIAFIIFFAGTVISALIFR >gi|304425344|gb|AEEM01000021.1| GENE 49 51869 - 52141 377 90 aa, chain + ## HITS:1 COG:SP0007 KEGG:ns NR:ns ## COG: SP0007 COG1188 # Protein_GI_number: 15899956 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Streptococcus pneumoniae TIGR4 # 1 87 1 87 88 112 86.0 2e-25 MRLDKYLKVSRIIKRRPVAKEVADKGRIKVNGILAKSSTDLKNNDEIEIRFGNKLLTVRV LEMKDSTKKEDATRMYEIINETRIEADGEA >gi|304425344|gb|AEEM01000021.1| GENE 50 52128 - 52499 409 123 aa, chain + ## HITS:1 COG:SPy0010 KEGG:ns NR:ns ## COG: SPy0010 COG2919 # Protein_GI_number: 15674258 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Streptococcus pyogenes M1 GAS # 1 123 1 123 123 143 65.0 1e-34 MEKPNIVQLNNQYINDENTKKRYVEEENRKRNRFMGWILIVVMLLFILPTYNLVKSYQTL QERKEQVVSLQKSYDKLVVETDAEKLLADRLKDDTYVEKYARAKYYLSRSGETIYPLPNL LPK >gi|304425344|gb|AEEM01000021.1| GENE 51 52414 - 52620 170 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKNMLALNITYHVLVKQSIRCQTYYQNNMENLIETIEKFLAYSDEKLEELAKENQKLRE ENHQSTKN >gi|304425344|gb|AEEM01000021.1| GENE 52 52636 - 53922 1416 428 aa, chain + ## HITS:1 COG:SPy0012 KEGG:ns NR:ns ## COG: SPy0012 COG2367 # Protein_GI_number: 15674259 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Streptococcus pyogenes M1 GAS # 1 428 1 428 428 451 56.0 1e-126 MKKLFAVMLIPFFLTSLSVVSTEKTIALTNEEKYQLTSNVVAETTYFDSIPTNPILAQDS NTYKDTALTTVSDTLSAGDTLSIVDLTINDSAIPVFELSDGSYIEASRQFIYDDVVISQE NISKEYWLEDGFKVYQAPYVTGTKEVKTDLTSYSEVTVTQKATTYHGTYYKVDGKGWISE DDLSATDNRMEKVQQVLNQKYNKSNYSIYVKQLSTQTTAGINADTVMYSASVAKLATLYY VEEKLQDGTISANDTLKYVDAVNSFAKAYDPSGSGKISKTADNKEYTIDDLLKAVAQNSD NVATNILGYYVANQYDDDFNSEISAIAGTDIDMKARNMSSKTAANLMEAIYNQDGDIISY LSSTAFDTTRISRDIDVQVAHKIGDAYDYKHDVAIIYADEPFILSIFTNNASYDDISNIA NDVYAILK >gi|304425344|gb|AEEM01000021.1| GENE 53 53927 - 55192 995 421 aa, chain + ## HITS:1 COG:SPy0013 KEGG:ns NR:ns ## COG: SPy0013 COG0037 # Protein_GI_number: 15674260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Streptococcus pyogenes M1 GAS # 2 418 4 425 428 481 60.0 1e-136 MYDNIFKEIQKKAYFAKHKKVLIAVSGGVDSMNLLHFLYIYRDKLEIEIGIAHINHKQRQ ESEMEEAYLCEWAEKHQIPIYVDYFSGIFSEKAARDFRYQFFKKIMVEKNYTAVVTAHHA DDQAETIFMRFLRGSRLRHLSGMQAVSSFGTGELIRPFLTIPKKDLPEIFHFEDDSNQSL DYLRNRIRNQYLPSLEKENPKFRQALQHLGQESQQLFQAIQDLTAEIDVTDCSQFLAQTT AVQTVLFQNYLEEFPDLQVSHGQFNEMLQLLRNKANLVYQIKGNYWLKKDYQSFQITKIR PKTDRESAEKVLEYDSIVKYGQYRFQFKNKDRDGIPVYSSHPILLRQRQAGDSIDFGTFS KKLRRLFIDEKISIQERTDAIIGEQDKKIIFVLVGGKTYLRKPSKHDIMEGKLYIEKIRN R >gi|304425344|gb|AEEM01000021.1| GENE 54 55197 - 55739 718 180 aa, chain + ## HITS:1 COG:SP0012 KEGG:ns NR:ns ## COG: SP0012 COG0634 # Protein_GI_number: 15899961 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 179 1 179 180 256 70.0 1e-68 MLEQDIKKVLYSEEEIIAKTKELGEQLTKDYEGKNPLLIGVLKGSVPFMAELIKHIDTHV ELDFMVVSSYGNQTTSSGEVKILKDVDTNIEGRDVVFIEDIIDTGRTLKYLRDMFKYRKA NSVKIATLFDKPEGRVVDIEADYVCYDVPNEFIVGFGLDYAERYRNLPYVGVLKEEIYSK >gi|304425344|gb|AEEM01000021.1| GENE 55 55761 - 57743 1315 660 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 117 635 87 605 636 511 51 1e-144 MKNNKNNGFVRNSFIYILLIIAGITAFQYYLRGTSTQSQQINYSTLIKQIKAGDIKSITY QPSGSIIEVSGEYTKAQTTETSSSLPFLEGSTTSTVTEFTSIVLPSDSSIEAITNAAEDA DVEVTVKQESSSGTWISYIITYIPFIVLIVFFFVMMNQGGNGARGAMSFGKNRAKSQSKG NVKVRFSDVAGAEEEKQELVEVVDFLKNPKKYKALGARIPAGVLLEGPPGTGKTLLAKAV AGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAERAIIFIDEIDAVGRRRGAGMG GGNDEREQTLNQLLIEMDGFEGNESIIVIAATNRSDVLDPALLRPGRFDRKILVGSPDVK GREAILRVHAKNKPLAEDVNLKVVAQQTPGFVGADLENVLNEAALVAARRNKKKIDASDI DEAEDRVIAGPSKKDRTISQKEREMVAYHEAGHTIVGLVLSSARVVHKVTIVPRGRAGGY MIALPKEDQMLHSKDDLKEQLAGLMGGRVAEEIIFNAQTTGASNDFEQATQLARAMVTEY GMSDKLGPVQYEGNHAVMTGQLSPEKTYSAQTAQMIDDEVRTLLNEARDKAADIINNNRE THKLIAEALLKYETLDAAQIKSIYETGKMPKELENDTEEAHALSYDEVKEKMDDSDDSKE Prediction of potential genes in microbial genomes Time: Sun May 29 12:59:00 2011 Seq name: gi|304425342|gb|AEEM01000022.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00032, whole genome shotgun sequence Length of sequence - 713 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 635 - 708 76.4 # Asn GTT 0 0 Prediction of potential genes in microbial genomes Time: Sun May 29 12:59:01 2011 Seq name: gi|304425340|gb|AEEM01000023.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00034, whole genome shotgun sequence Length of sequence - 1866 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 71 - 1348 335 ## COG3344 Retron-type reverse transcriptase - Prom 1419 - 1478 2.7 + Prom 1197 - 1256 3.1 2 2 Tu 1 . + CDS 1347 - 1547 88 ## Predicted protein(s) >gi|304425340|gb|AEEM01000023.1| GENE 1 71 - 1348 335 425 aa, chain - ## HITS:1 COG:BH0224 KEGG:ns NR:ns ## COG: BH0224 COG3344 # Protein_GI_number: 15612787 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 4 421 1 415 418 358 45.0 9e-99 MSPLLTQILSKENMMTAFTKVCANKGSAGVDGITITDIGLYLNKNWHMIKSQILARKYKP QPVLRVEIPKPQGGKRKLGIPTIVDRIIQQAIVQVITPLCEPHFQETSYGFRPNRSCEMA ILKLLDYLNDGYTWIVDIDLEKFFDNVPQDRLMSHVHNLINDGDTESLIRKYLQAGVMIQ GKYHDTPVGTPQGGNLSPLLSNIMLNELDKELMARGLRFVRYADDCVIAAGSRASAIRVM HSVTRYIEKRLGLKVNASKTKITKPTSLKYLGFGFWYQPKINQWVSRPHQDSVKRFKEKL KLLTSRKHSIDLDMRIQRLNWLIRGWINYFRIGVMKTALTKIDKHLRTRLRVIIWKQWKT KAKRRWGLLKLGVPRWLADKVSGWGNHYQLVACQSVLNQAISKPILTKRGLVSCLDYYME RHVNS >gi|304425340|gb|AEEM01000023.1| GENE 2 1347 - 1547 88 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCVIPFLFRYLRDTLYLDSSLSIRDSYYTYQTDVAGTGEVETPLQLIVHPFAPLLLQKFQ RYYGFG Prediction of potential genes in microbial genomes Time: Sun May 29 12:59:07 2011 Seq name: gi|304425337|gb|AEEM01000024.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00035, whole genome shotgun sequence Length of sequence - 1432 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 23/0.000 - CDS 30 - 749 611 ## COG2801 Transposase and inactivated derivatives - Prom 773 - 832 2.1 2 1 Op 2 . - CDS 845 - 1381 287 ## COG2963 Transposase and inactivated derivatives Predicted protein(s) >gi|304425337|gb|AEEM01000024.1| GENE 1 30 - 749 611 239 aa, chain - ## HITS:1 COG:SPy0198 KEGG:ns NR:ns ## COG: SPy0198 COG2801 # Protein_GI_number: 15674400 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 239 32 268 268 392 84.0 1e-109 MIQTIYDDHKGNYGYRRIHLELRNRGFVINHKKVQRLMKLMGLAARTRCKRKYSSYKGEI GKKADNLIQRQFEGAKPYEKCYTDVTEFALPNIKEKVYLSPILDGYNSEIIEFTLSRSPD LKQIQTMLKKAFPDDSYQGTILHSDQGWQYQHQSYHDFLASKGIRPSMSRKGNSPDNGMM ESFFGILKSEMFYGYEKTFKSIDKLEQAITDYIFYYNNKRIKAKLKGLSPVQYRIKSFQ >gi|304425337|gb|AEEM01000024.1| GENE 2 845 - 1381 287 178 aa, chain - ## HITS:1 COG:SPy0199 KEGG:ns NR:ns ## COG: SPy0199 COG2963 # Protein_GI_number: 15674401 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 171 171 148 54.0 6e-36 MKLSYEDKLEIYTLRKQGYSLRELARRYCVTKLTVDYMIRLMERYGVEIVKRRKNTYYPP KLKLEMIHKVLRDGQSQIQVSLDYALPNQGTLPNWLSQYKKNGYTIVEKQRGRPSKMGRK PKKTCKEMTELEHVLEENERLRTEVAYLKKLRELRLRDEALQRKRRRQLENWSQEDFD Prediction of potential genes in microbial genomes Time: Sun May 29 12:59:08 2011 Seq name: gi|304425335|gb|AEEM01000025.1| Streptococcus gallolyticus subsp. gallolyticus TX20005 contig00037, whole genome shotgun sequence Length of sequence - 2177 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 2177 1437 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins Predicted protein(s) >gi|304425335|gb|AEEM01000025.1| GENE 1 2 - 2177 1437 725 aa, chain - ## HITS:1 COG:lin0054 KEGG:ns NR:ns ## COG: lin0054 COG1674 # Protein_GI_number: 16799133 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Listeria innocua # 2 720 555 1275 1498 867 57.0 0 EDRNHGQLVMEEGELREVDFALDHFPADYDKEAIARRLAPLNHLQNLKSSIPDRVTFMEM YHAESVEELTVPERWDSHAPYKSLAVPLGLRGQDDVVSLNLHERAHGPHGLIAGTTGSGK SELIQSYILSLAVNFHPYDVAFLLIDYKGGGMANLFKDLPHLLGTITNLDGAQAMRALTS INAEIHRRERLFAANGVNHINQYQKKYKLGEVAEPLPHLFLISDEFAELKQEQPDFMSAL VSTARTGRSLGIHLILATQKPAGVVNDQIWSNSRFKIALKVADRQDSNEMLHTPDAAEIT QTGRAYLQVGNNEVYELFQSAWSGADYQPDKDDQGIEDQTIYAINALGQYDILNDDLSGL EDVEDIRQVPSELDAIVHHLHDLTQTLNPLARPWLPPLATRVYSQDLRPSAFQDLWQQST GSLKALIGLVDLPSQQAQKVCYHDFEVDGNVVLFSAPGNGKSTFLQTLTMDLARQNTPEL LHCYLFDFGTNGLLPLRSLPHVADSFMMEDSEKITKFILRMKTEMATRKKRFSQYGVSNI KLYRQLSGEQLPEILIMIDSYDGIKEAETGEALEAMIQTLSRDGGSLGINVVITAGRTGV IKSALQANFKTRISLKMTDNNDTRNIMGRHDYTMEDIPGRGLILVDKPEVFQTALPARGE DSVAMLQALQEEAEEMAAAWTGPRPNRIPVVPEKLSLEDFMAKPSVQEALHNNELPIGLD MIHVE