Prediction of potential genes in microbial genomes Time: Sun May 29 18:14:40 2011 Seq name: gi|311102135|gb|AEKO01000001.1| Streptococcus vestibularis F0396 ctg1126932565721, whole genome shotgun sequence Length of sequence - 15668 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 5, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 49 - 1583 99.0 # AY188352 [D:1..1546] # 16S ribosomal RNA # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 1644 - 1716 84.6 # Ala TGC 0 0 + LSU_RRNA 1863 - 4759 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + 5S_RRNA 4776 - 5023 88.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 4963 - 5036 75.9 # Val TAC 0 0 + TRNA 5039 - 5112 63.1 # Asp GTC 0 0 + TRNA 5132 - 5204 82.2 # Lys TTT 0 0 + TRNA 5210 - 5291 69.0 # Leu TAG 0 0 + TRNA 5305 - 5377 83.5 # Thr TGT 0 0 + TRNA 5384 - 5455 79.1 # Gly GCC 0 0 + TRNA 5462 - 5547 68.9 # Leu TAA 0 0 + TRNA 5562 - 5635 74.4 # Arg ACG 0 0 + TRNA 5642 - 5715 86.8 # Pro TGG 0 0 + TRNA 5721 - 5794 77.0 # Met CAT 0 0 + TRNA 5809 - 5882 89.7 # Met CAT 0 0 + TRNA 5903 - 5992 63.6 # Ser TGA 0 0 + TRNA 6002 - 6075 74.6 # Met CAT 0 0 + TRNA 6079 - 6151 75.1 # Phe GAA 0 0 + TRNA 6164 - 6234 71.9 # Gly TCC 0 0 + TRNA 6268 - 6341 86.1 # Ile GAT 0 0 + TRNA 6346 - 6433 57.4 # Ser GCT 0 0 + Prom 6358 - 6417 80.4 1 1 Op 1 . + CDS 6489 - 7319 713 ## COG1792 Cell shape-determining protein 2 1 Op 2 . + CDS 7291 - 7845 273 ## str0021 rod shape-determining protein MreD + Prom 7850 - 7909 1.9 3 1 Op 3 . + CDS 7930 - 9330 1714 ## COG3883 Uncharacterized protein conserved in bacteria + Term 9337 - 9389 5.3 - Term 9417 - 9461 2.2 4 2 Op 1 . - CDS 9560 - 10762 972 ## COG3547 Transposase and inactivated derivatives - Prom 10797 - 10856 2.8 - Term 10935 - 10971 1.0 5 2 Op 2 . - CDS 11034 - 12290 463 ## COG3464 Transposase and inactivated derivatives - Prom 12394 - 12453 8.5 6 3 Tu 1 . - CDS 12780 - 13055 206 ## str1904 hypothetical protein - Prom 13083 - 13142 5.8 + Prom 13070 - 13129 6.2 7 4 Tu 1 . + CDS 13315 - 14280 1092 ## COG0462 Phosphoribosylpyrophosphate synthetase + Term 14331 - 14365 3.6 8 5 Tu 1 . - CDS 14698 - 15564 314 ## COG3464 Transposase and inactivated derivatives - Prom 15591 - 15650 4.2 Predicted protein(s) >gi|311102135|gb|AEKO01000001.1| GENE 1 6489 - 7319 713 276 aa, chain + ## HITS:1 COG:SP2218 KEGG:ns NR:ns ## COG: SP2218 COG1792 # Protein_GI_number: 15902022 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Streptococcus pneumoniae TIGR4 # 7 274 3 271 272 143 33.0 4e-34 MKNSFYRFLLYAFLLILFFVMLFSFVFTNNKLSKDVSSNVSGVVSKVDSVISLPFIALEK SHDVISDFLSTYSENRDLKKSLSTVENQSAVISNLQEENDSLRASLNLSDKLSRNNVITA EVSMRPSVTWLKELTINVGKSKNVSKSMLATSNGGVIGFITKIYDHSTTISLLSNSSNDS YIASSVKGEDESQIFGIISSYDNKKKLLEMSQLNSSSDVKVGSEVVTSGLDEVSVKNVPI GTVESVIDYEGNRTILVKPYADFDKISYVTLVGDGK >gi|311102135|gb|AEKO01000001.1| GENE 2 7291 - 7845 273 184 aa, chain + ## HITS:1 COG:no KEGG:str0021 NR:ns ## KEGG: str0021 # Name: mreD # Def: rod shape-determining protein MreD # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 184 9 192 192 195 88.0 6e-49 MLLLLEMVSNMKFFKFSAIPFLLSIIPFLWDGHISMLLNHYFSPELFLSSHLFIIYMSIL TLSRPNNFSFLYLVCLGFLYDTYYFKTVGIVIITLPLLSYLLVQLLRFVKRNAYVDCLLA FLFLFFFDTINFGFALYYGFTNESISDFIIYQLSPSLMFNLLIFILIKPGVEKLFLYLSV DRFK >gi|311102135|gb|AEKO01000001.1| GENE 3 7930 - 9330 1714 466 aa, chain + ## HITS:1 COG:SPy0019_1 KEGG:ns NR:ns ## COG: SPy0019_1 COG3883 # Protein_GI_number: 15674263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 215 1 215 263 129 50.0 2e-29 MKKRILSAVLVSGVTLSAAASVHAEDYDSQIVAADNAISNLASQQETAQAQVATIQSQVS TLRTQKSELETKNAELEKVSADLESEIQELSSKIVARQDSLAKQARSAQQNNTATSYINS ILNSKSISEAITRITAISKVVTANNDMLTKQESDQKELAAKQEENQAAINEIATNKAELE TTEAGLTTQQAELEAAQVALAAELATAQDEKTSLVSAKSTAEAVAASTAASVAQSQAIAE SEAAAQAVASSEAAAFVAQSEAAATSEATVSETATSSEAAQEPVSSATSETTQAPTAPAT SEAQLESAAPVASEAPAPASEAPVATSEAPASQAPAASEAPAPAAETPKVSAASTPNTYP VGQCTWGAKSLASWVGNYWGNAKNWIASAQAAGHSVGTTPVAGAIAVWPNDGGGYGHVAY VTSASGANSIQVMESNYAGNMSIGNYRGTFDPTSSAHGGSVYYIYP >gi|311102135|gb|AEKO01000001.1| GENE 4 9560 - 10762 972 400 aa, chain - ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 190 383 1 194 196 293 77.0 5e-79 MRAVFGIDVSKTSSEVAILVNGEKVHGYTILNDTIGFNRLLGDLKTVHNPEIIFEATGVY SRRLQAFLEEYSYAYTRLNPLEAKKQLDSLRVRKTDKIDAEKLAKSQLVHNRKPTYVQEE VYQHLRDLSRFYQNMTEDLVRTKNRLHKVLQVTFPELENLLSTPTGEQYWNLVMAFPCKE FVLSLSQSNLCEIIRQSTSKRISEKRIAYLTDKLIKLAKQSFCAVKKTSPMLEEVRYYAQ ELLRLSERRQVVLNDMVALAQPLPEYDILRSIPGIAEATATSIIGELGDIRRFQSTNQIN AFIGIDLRHYESGNFLSKEHITKRGNPYARKILFKCIHNIASASHTNPCHIADFYEKRKR QSTIASTKPHTIASIHRLIRTMYYLITHNKLYDYSLTQNR >gi|311102135|gb|AEKO01000001.1| GENE 5 11034 - 12290 463 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 482 62.0 1e-136 MRLIKNTTELIGIKDPNIIISLVFETDTHIEVQAKLDYPAPSCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLRLKKRRFQCKSCRRVTVAETSIVEKNCQISNLVRQKVAQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKEHYDKLPAVMSWDEFGFKKGELAFVAQNYETNQLIT ILDNHLQTTIRNYFLKYPLEARQKVQFITMDMSGAYIPLAKKLFPNAKIVLDRFHIIQHL GRAFLKIRIAIMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLSPHEVVE KTLDFSEELTNYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311102135|gb|AEKO01000001.1| GENE 6 12780 - 13055 206 91 aa, chain - ## HITS:1 COG:no KEGG:str1904 NR:ns ## KEGG: str1904 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 85 1 85 95 120 78.0 1e-26 MSYHHFSIDERESILIYRTQGLNFSQIAKLFHRHPSSISREWKRHLKEGSYSPSHAQKSY YIAKSHYGRKRMLERDHNLSNTVKHLFLDYQ >gi|311102135|gb|AEKO01000001.1| GENE 7 13315 - 14280 1092 321 aa, chain + ## HITS:1 COG:SPy0020 KEGG:ns NR:ns ## COG: SPy0020 COG0462 # Protein_GI_number: 15674264 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 320 1 320 320 547 91.0 1e-155 MSYTNLKLFALSSNQELAAKVADKIGIELGKSSVREFSDGEIQVNIEESIRGHHVFILQS TSSPVNDNLMEILIMVDALKRASAETISVVMPYYGYARQDRKARSREPITSKLVANMLEV AGVDRLLTVDLHASQIQGFFDIPVDHLMGAPLIADYFDRAGLMGDDVVVVSPDHGGVTRA RKLAQCLKTPIAIIDKRRSVDKMNTSEVMNIIGNVEGKTCILIDDMIDTAGTICHAADAL AEAGATHVFASCTHPVLSGPALDNIQKSAIEKLVVLDTIYLPEERLIDKIEQISIADLIS EAIIRIHEKRPLSPLFEMSHK >gi|311102135|gb|AEKO01000001.1| GENE 8 14698 - 15564 314 288 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 285 1 293 422 338 61.0 9e-93 MRLIKNTTELIGIKDPNIIISLVFETDTHIEVQAKLDYPAPPCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLCLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLHVSTSTVYRKLDQFTFKKHYDKLPAIMSWDEFGFKKGALAFIAQNYETNELIT ILDNRRQTTIRNHFLKYPLKVRQKVQFITMDMSGAYIPLARRLFPNAEIIIDRFHIIQHL SRAFLKTRIAIMNQFDKKSLPYRALKNHWRLSRKLSCKSFHSKTFVKP Prediction of potential genes in microbial genomes Time: Sun May 29 18:17:29 2011 Seq name: gi|311101983|gb|AEKO01000002.1| Streptococcus vestibularis F0396 ctg1126932565726, whole genome shotgun sequence Length of sequence - 141827 bp Number of predicted genes - 153, with homology - 149 Number of transcription units - 73, operones - 37 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 31 - 420 354 ## SSUSC84_0776 hypothetical protein 2 1 Op 2 . - CDS 443 - 1264 654 ## SSU05_0868 hypothetical protein - Prom 1305 - 1364 7.8 + Prom 1238 - 1297 6.7 3 2 Op 1 . + CDS 1411 - 1578 169 ## LSL_1395 hypothetical protein 4 2 Op 2 . + CDS 1650 - 1922 171 ## + Prom 1924 - 1983 4.0 5 3 Op 1 . + CDS 2003 - 2824 206 ## PC1_3280 hypothetical protein 6 3 Op 2 . + CDS 2821 - 4746 560 ## COG0433 Predicted ATPase + Term 4793 - 4828 6.4 - Term 4779 - 4817 7.9 7 4 Op 1 3/0.133 - CDS 4974 - 5123 251 ## PROTEIN SUPPORTED gi|55821942|ref|YP_140384.1| 50S ribosomal protein L33 8 4 Op 2 . - CDS 5139 - 5321 311 ## PROTEIN SUPPORTED gi|19747000|ref|NP_608136.1| 50S ribosomal protein L32 - Prom 5502 - 5561 6.6 + Prom 5450 - 5509 6.4 9 5 Tu 1 . + CDS 5550 - 6662 1334 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 6676 - 6710 5.3 + Prom 6794 - 6853 7.5 10 6 Op 1 . + CDS 6911 - 7597 632 ## COG0124 Histidyl-tRNA synthetase 11 6 Op 2 . + CDS 7636 - 8190 682 ## COG0124 Histidyl-tRNA synthetase 12 6 Op 3 . + CDS 8198 - 8620 444 ## str1970 hypothetical protein + Term 8637 - 8692 9.2 + Prom 8645 - 8704 7.3 13 7 Op 1 3/0.133 + CDS 8730 - 10481 2316 ## COG0173 Aspartyl-tRNA synthetase 14 7 Op 2 . + CDS 10474 - 11415 764 ## COG1284 Uncharacterized conserved protein + Term 11424 - 11459 1.1 + Prom 11443 - 11502 7.3 15 8 Tu 1 . + CDS 11535 - 12242 279 ## COG3022 Uncharacterized protein conserved in bacteria - Term 12225 - 12257 3.3 16 9 Op 1 2/0.133 - CDS 12262 - 12867 540 ## COG0602 Organic radical activating enzymes 17 9 Op 2 . - CDS 12872 - 13372 272 ## PROTEIN SUPPORTED gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 18 9 Op 3 . - CDS 13374 - 13505 150 ## 19 9 Op 4 . - CDS 13595 - 15799 1948 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 15835 - 15894 8.5 - Term 15832 - 15887 2.5 20 10 Tu 1 . - CDS 15897 - 17543 1030 ## stu1962 hypothetical protein - Prom 17618 - 17677 8.3 - Term 17666 - 17720 11.1 21 11 Op 1 7/0.000 - CDS 17756 - 18061 447 ## COG3906 Uncharacterized protein conserved in bacteria 22 11 Op 2 6/0.067 - CDS 18169 - 18588 595 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 23 11 Op 3 . - CDS 18588 - 18854 404 ## COG4472 Uncharacterized protein conserved in bacteria - Prom 18889 - 18948 9.3 - Term 18923 - 18972 5.4 24 12 Tu 1 . - CDS 18979 - 19167 317 ## PROTEIN SUPPORTED gi|228478059|ref|ZP_04062670.1| ribosomal protein L28 - Prom 19220 - 19279 6.4 + Prom 19217 - 19276 9.6 25 13 Tu 1 . + CDS 19337 - 20605 1550 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase + TRNA 20887 - 20959 84.4 # Lys CTT 0 0 - Term 20952 - 21012 4.1 26 14 Op 1 . - CDS 21046 - 22185 455 ## COG0582 Integrase 27 14 Op 2 . - CDS 22187 - 22375 358 ## str1954 hypothetical protein 28 15 Tu 1 . - CDS 22506 - 23003 333 ## str1953 replication initiator protein - Prom 23114 - 23173 5.5 + Prom 23662 - 23721 8.5 29 16 Op 1 . + CDS 23800 - 24312 467 ## STER_1926 XRE family transcriptional regulator + Term 24353 - 24388 -0.5 + Prom 24440 - 24499 9.5 30 16 Op 2 . + CDS 24531 - 25046 616 ## SSA_0234 hypothetical protein + Term 25071 - 25118 11.2 + Prom 25597 - 25656 8.6 31 17 Op 1 . + CDS 25733 - 26338 833 ## RMDY18_18410 inorganic pyrophosphatase/exopolyphosphatase 32 17 Op 2 . + CDS 26427 - 26783 187 ## STER_1926 XRE family transcriptional regulator + Term 26793 - 26821 1.0 + Prom 26912 - 26971 11.9 33 18 Op 1 . + CDS 26997 - 27122 84 ## SSA_0230 hypothetical protein + Prom 27126 - 27185 1.7 34 18 Op 2 . + CDS 27234 - 28142 696 ## COG4292 Predicted membrane protein + Term 28156 - 28202 3.0 + Prom 28549 - 28608 6.3 35 19 Tu 1 . + CDS 28639 - 29148 209 ## COG0563 Adenylate kinase and related kinases + Term 29224 - 29265 -0.5 + Prom 29257 - 29316 8.0 36 20 Tu 1 . + CDS 29412 - 30704 1599 ## COG0104 Adenylosuccinate synthase + Term 30709 - 30756 4.4 + Prom 30813 - 30872 6.0 37 21 Op 1 2/0.133 + CDS 30986 - 31420 199 ## COG0394 Protein-tyrosine-phosphatase 38 21 Op 2 1/0.333 + CDS 31417 - 31821 338 ## COG4642 Uncharacterized protein conserved in bacteria 39 21 Op 3 . + CDS 31818 - 33641 1801 ## COG1835 Predicted acyltransferases + Term 33657 - 33693 5.0 + Prom 33649 - 33708 5.0 40 22 Tu 1 . + CDS 33732 - 34733 1162 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 34734 - 34774 6.9 + Prom 34788 - 34847 7.5 41 23 Op 1 40/0.000 + CDS 34976 - 35284 511 ## PROTEIN SUPPORTED gi|55821906|ref|YP_140348.1| 30S ribosomal protein S10 + Prom 35318 - 35377 4.0 42 23 Op 2 58/0.000 + CDS 35398 - 36024 1056 ## PROTEIN SUPPORTED gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 43 23 Op 3 61/0.000 + CDS 36049 - 36672 1012 ## PROTEIN SUPPORTED gi|55821904|ref|YP_140346.1| 50S ribosomal protein L4 44 23 Op 4 61/0.000 + CDS 36672 - 36968 476 ## PROTEIN SUPPORTED gi|55821903|ref|YP_140345.1| 50S ribosomal protein L23 45 23 Op 5 60/0.000 + CDS 36986 - 37819 1427 ## PROTEIN SUPPORTED gi|228478123|ref|ZP_04062734.1| ribosomal protein L2 46 23 Op 6 59/0.000 + CDS 37913 - 38191 487 ## PROTEIN SUPPORTED gi|15674291|ref|NP_268464.1| 30S ribosomal protein S19 47 23 Op 7 61/0.000 + CDS 38207 - 38551 554 ## PROTEIN SUPPORTED gi|55821900|ref|YP_140342.1| 50S ribosomal protein L22 48 23 Op 8 50/0.000 + CDS 38564 - 39217 1106 ## PROTEIN SUPPORTED gi|228478008|ref|ZP_04062619.1| ribosomal protein S3 49 23 Op 9 50/0.000 + CDS 39221 - 39634 712 ## PROTEIN SUPPORTED gi|22536250|ref|NP_687101.1| 50S ribosomal protein L16 50 23 Op 10 50/0.000 + CDS 39644 - 39850 324 ## PROTEIN SUPPORTED gi|228478030|ref|ZP_04062641.1| ribosomal protein L29 51 23 Op 11 50/0.000 + CDS 39878 - 40138 430 ## PROTEIN SUPPORTED gi|116628589|ref|YP_821208.1| 30S ribosomal protein S17 52 23 Op 12 57/0.000 + CDS 40163 - 40531 604 ## PROTEIN SUPPORTED gi|228477998|ref|ZP_04062609.1| ribosomal protein L14 53 23 Op 13 48/0.000 + CDS 40612 - 40917 504 ## PROTEIN SUPPORTED gi|116628587|ref|YP_821206.1| 50S ribosomal protein L24 54 23 Op 14 50/0.000 + CDS 40944 - 41486 899 ## PROTEIN SUPPORTED gi|116628586|ref|YP_821205.1| 50S ribosomal protein L5 55 23 Op 15 50/0.000 + CDS 41504 - 41689 329 ## PROTEIN SUPPORTED gi|228477968|ref|ZP_04062579.1| ribosomal protein S14p/S29e + Term 41700 - 41741 4.3 + Prom 41709 - 41768 3.6 56 23 Op 16 55/0.000 + CDS 41812 - 42210 660 ## PROTEIN SUPPORTED gi|228477967|ref|ZP_04062578.1| ribosomal protein S8 + Prom 42215 - 42274 2.3 57 23 Op 17 46/0.000 + CDS 42337 - 42873 902 ## PROTEIN SUPPORTED gi|228478090|ref|ZP_04062701.1| ribosomal protein L6 58 23 Op 18 56/0.000 + CDS 42954 - 43319 591 ## PROTEIN SUPPORTED gi|73621712|sp|Q5LXS7|RL18_STRT1 RecName: Full=50S ribosomal protein L18 gi|73621713|sp|Q5M2C9|RL18_STRT2 RecName: Full=50S ribosomal protein L18 gi|55737874|gb|AAV61516.1| 50S ribosomal protein L18 59 23 Op 19 50/0.000 + CDS 43338 - 43832 791 ## PROTEIN SUPPORTED gi|228477953|ref|ZP_04062564.1| ribosomal protein S5 60 24 Tu 1 . - CDS 43580 - 43903 501 ## PROTEIN SUPPORTED gi|77406115|ref|ZP_00783189.1| ribosomal protein - Prom 44123 - 44182 5.4 61 25 Op 1 48/0.000 + CDS 43847 - 44029 289 ## PROTEIN SUPPORTED gi|228478046|ref|ZP_04062657.1| ribosomal protein L30 + Term 44035 - 44083 11.2 62 25 Op 2 53/0.000 + CDS 44112 - 44597 771 ## PROTEIN SUPPORTED gi|55737871|gb|AAV61513.1| 50S ribosomal protein L15 63 25 Op 3 28/0.000 + CDS 44614 - 45909 719 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 45930 - 45971 4.3 + Prom 45946 - 46005 4.7 64 25 Op 4 6/0.067 + CDS 46041 - 46679 878 ## COG0563 Adenylate kinase and related kinases + Term 46702 - 46746 -0.4 + Prom 46690 - 46749 3.2 65 26 Op 1 . + CDS 46797 - 47015 347 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 66 26 Op 2 . + CDS 47041 - 47157 210 ## PROTEIN SUPPORTED gi|15674310|ref|NP_268483.1| 50S ribosomal protein L36 67 26 Op 3 48/0.000 + CDS 47175 - 47540 597 ## PROTEIN SUPPORTED gi|55821881|ref|YP_140323.1| 30S ribosomal protein S13 68 26 Op 4 32/0.000 + CDS 47567 - 47950 636 ## PROTEIN SUPPORTED gi|55821880|ref|YP_140322.1| 30S ribosomal protein S11 69 26 Op 5 50/0.000 + CDS 47999 - 48937 985 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 70 26 Op 6 . + CDS 48955 - 49341 625 ## PROTEIN SUPPORTED gi|228477997|ref|ZP_04062608.1| ribosomal protein L17 + Term 49468 - 49531 18.2 + Prom 49443 - 49502 6.1 71 27 Tu 1 . + CDS 49591 - 50886 880 ## COG3572 Gamma-glutamylcysteine synthetase + TRNA 51070 - 51155 62.1 # Leu AAG 0 0 + Prom 51080 - 51139 80.4 72 28 Op 1 . + CDS 51301 - 52182 1262 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 52197 - 52229 -0.0 + Prom 52184 - 52243 4.2 73 28 Op 2 . + CDS 52348 - 52704 467 ## str1896 hypothetical protein 74 28 Op 3 . + CDS 52737 - 53075 136 ## str1895 hypothetical protein 75 28 Op 4 . + CDS 53091 - 53651 765 ## COG4475 Uncharacterized protein conserved in bacteria + Term 53655 - 53690 6.0 - Term 53638 - 53684 8.8 76 29 Tu 1 . - CDS 53705 - 54415 560 ## COG2188 Transcriptional regulators - Prom 54517 - 54576 8.1 + Prom 54388 - 54447 7.2 77 30 Op 1 9/0.000 + CDS 54572 - 56551 2444 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 56557 - 56595 3.7 78 30 Op 2 1/0.333 + CDS 56615 - 58240 1493 ## COG0366 Glycosidases + Term 58249 - 58289 7.0 + Prom 58242 - 58301 4.9 79 31 Tu 1 . + CDS 58322 - 60217 1929 ## COG3590 Predicted metalloendopeptidase + Term 60226 - 60267 8.1 + Prom 60254 - 60313 12.5 80 32 Op 1 . + CDS 60360 - 62948 2806 ## COG1454 Alcohol dehydrogenase, class IV + Term 62962 - 62992 2.0 + Prom 62998 - 63057 2.8 81 32 Op 2 . + CDS 63090 - 63299 72 ## + Prom 63301 - 63360 4.9 82 33 Op 1 2/0.133 + CDS 63386 - 64870 1873 ## COG0498 Threonine synthase + Term 64882 - 64917 2.1 83 33 Op 2 . + CDS 64931 - 66217 1267 ## COG0534 Na+-driven multidrug efflux pump + Term 66229 - 66273 6.0 + Prom 66245 - 66304 7.6 84 34 Op 1 9/0.000 + CDS 66329 - 66694 451 ## COG1302 Uncharacterized protein conserved in bacteria 85 34 Op 2 . + CDS 66727 - 68361 1715 ## COG1461 Predicted kinase related to dihydroxyacetone kinase + Term 68416 - 68450 5.3 - Term 68274 - 68320 -0.4 86 35 Tu 1 . - CDS 68363 - 69661 476 ## COG3464 Transposase and inactivated derivatives - Prom 69766 - 69825 7.7 + Prom 69860 - 69919 8.6 87 36 Op 1 6/0.067 + CDS 69949 - 71766 2250 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 88 36 Op 2 32/0.000 + CDS 71803 - 73503 1835 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 89 36 Op 3 15/0.000 + CDS 73496 - 73972 557 ## COG0440 Acetolactate synthase, small (regulatory) subunit 90 36 Op 4 . + CDS 74047 - 75069 1435 ## COG0059 Ketol-acid reductoisomerase + Term 75081 - 75120 4.5 - Term 75147 - 75179 3.2 91 37 Tu 1 . - CDS 75192 - 76448 692 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 76473 - 76532 8.1 + Prom 76419 - 76478 4.8 92 38 Tu 1 . + CDS 76550 - 78973 2201 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 79191 - 79230 2.0 + Prom 79084 - 79143 4.0 93 39 Op 1 58/0.000 + CDS 79333 - 82914 3962 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit + Prom 82921 - 82980 7.0 94 39 Op 2 . + CDS 83042 - 86653 4015 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 86661 - 86707 9.4 + Prom 86699 - 86758 6.6 95 40 Tu 1 . + CDS 86983 - 88185 916 ## COG3547 Transposase and inactivated derivatives + Term 88358 - 88399 0.6 + Prom 88358 - 88417 7.7 96 41 Tu 1 . + CDS 88442 - 88804 333 ## COG4699 Uncharacterized protein conserved in bacteria + Term 88813 - 88848 6.0 + Prom 88906 - 88965 4.9 97 42 Tu 1 . + CDS 89176 - 89466 356 ## COG1943 Transposase and inactivated derivatives + Term 89530 - 89565 5.6 + Prom 89508 - 89567 3.5 98 43 Op 1 . + CDS 89649 - 91571 1763 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 99 43 Op 2 6/0.067 + CDS 91627 - 91893 234 ## COG4537 Competence protein ComGC 100 43 Op 3 . + CDS 91844 - 92281 219 ## COG2165 Type II secretory pathway, pseudopilin PulG 101 43 Op 4 . + CDS 92313 - 92543 251 ## str1861 hypothetical protein 102 43 Op 5 . + CDS 92530 - 92967 296 ## COG4940 Competence protein ComGF 103 43 Op 6 . + CDS 92945 - 93262 303 ## str1859 hypothetical protein 104 43 Op 7 7/0.000 + CDS 93307 - 94263 1094 ## COG0827 Adenine-specific DNA methylase 105 43 Op 8 . + CDS 94320 - 95513 1473 ## COG0282 Acetate kinase + Term 95543 - 95576 1.3 + Prom 95600 - 95659 9.3 106 44 Op 1 . + CDS 95764 - 95961 252 ## COG1476 Predicted transcriptional regulators 107 44 Op 2 . + CDS 95975 - 96418 468 ## STER_1830 hypothetical protein + Prom 96430 - 96489 9.9 108 45 Tu 1 . + CDS 96519 - 97181 370 ## COG1266 Predicted metal-dependent membrane protease + Term 97183 - 97212 2.1 - Term 97167 - 97206 3.2 109 46 Op 1 1/0.333 - CDS 97207 - 97977 964 ## COG0345 Pyrroline-5-carboxylate reductase 110 46 Op 2 . - CDS 97993 - 99060 1212 ## COG1363 Cellulase M and related proteins - Prom 99136 - 99195 3.9 + Prom 99013 - 99072 5.0 111 47 Op 1 . + CDS 99160 - 99444 337 ## stu1850 hypothetical protein 112 47 Op 2 2/0.133 + CDS 99441 - 99755 433 ## COG0526 Thiol-disulfide isomerase and thioredoxins 113 47 Op 3 . + CDS 99765 - 100388 603 ## COG0073 EMAP domain + Term 100398 - 100431 0.5 + Prom 100444 - 100503 6.6 114 48 Tu 1 . + CDS 100526 - 101557 1027 ## COG2391 Predicted transporter component + Prom 101902 - 101961 5.5 115 49 Tu 1 . + CDS 102003 - 102395 533 ## COG0629 Single-stranded DNA-binding protein + Prom 102831 - 102890 4.9 116 50 Tu 1 . + CDS 103094 - 103612 641 ## COG0590 Cytosine/adenosine deaminases + Term 103621 - 103654 1.0 - Term 103602 - 103647 7.3 117 51 Op 1 . - CDS 103693 - 103956 257 ## STER_1818 hypothetical protein 118 51 Op 2 . - CDS 104009 - 104146 61 ## str1843 hypothetical protein 119 51 Op 3 . - CDS 104194 - 104358 243 ## gi|228477975|ref|ZP_04062586.1| hypothetical protein STRSA0001_0547 - Prom 104498 - 104557 6.5 + Prom 104559 - 104618 8.0 120 52 Tu 1 . + CDS 104714 - 105553 811 ## COG0500 SAM-dependent methyltransferases + Prom 105572 - 105631 6.6 121 53 Op 1 1/0.333 + CDS 105667 - 106419 555 ## COG1011 Predicted hydrolase (HAD superfamily) + Prom 106421 - 106480 5.8 122 53 Op 2 6/0.067 + CDS 106505 - 107203 1043 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 107215 - 107247 4.0 123 54 Op 1 1/0.333 + CDS 107281 - 108414 1214 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 108439 - 108473 0.5 124 54 Op 2 4/0.067 + CDS 108483 - 109010 476 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 125 54 Op 3 . + CDS 109001 - 109675 645 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Term 109682 - 109732 8.5 - Term 109678 - 109712 2.1 126 55 Op 1 3/0.133 - CDS 109721 - 110635 1165 ## COG1210 UDP-glucose pyrophosphorylase 127 55 Op 2 . - CDS 110653 - 111675 1208 ## COG0240 Glycerol-3-phosphate dehydrogenase - Prom 111727 - 111786 4.4 128 56 Op 1 . - CDS 111794 - 112354 497 ## STER_1808 hypothetical protein 129 56 Op 2 . - CDS 112363 - 113064 503 ## COG2116 Formate/nitrite family of transporters - Prom 113219 - 113278 5.9 130 57 Tu 1 . - CDS 113292 - 114494 916 ## COG3547 Transposase and inactivated derivatives - Prom 114719 - 114778 4.6 - Term 114849 - 114891 8.0 131 58 Op 1 1/0.333 - CDS 114898 - 116145 1433 ## COG2461 Uncharacterized conserved protein 132 58 Op 2 . - CDS 116164 - 116766 744 ## COG0431 Predicted flavoprotein - Prom 116931 - 116990 9.3 + Prom 116842 - 116901 6.3 133 59 Tu 1 . + CDS 116979 - 117425 618 ## COG0756 dUTPase + Prom 117599 - 117658 5.0 134 60 Op 1 . + CDS 117823 - 118965 1009 ## COG1066 Predicted ATP-dependent serine protease + Prom 118973 - 119032 7.3 135 60 Op 2 1/0.333 + CDS 119053 - 119748 711 ## COG2013 Uncharacterized conserved protein + Term 119757 - 119806 15.6 + Prom 119791 - 119850 6.0 136 61 Tu 1 . + CDS 119899 - 120396 534 ## COG0288 Carbonic anhydrase + Term 120409 - 120442 2.9 - Term 120440 - 120477 1.0 137 62 Tu 1 . - CDS 120490 - 120843 348 ## str1819 hypothetical protein - Prom 120922 - 120981 5.5 + Prom 120881 - 120940 7.7 138 63 Op 1 55/0.000 + CDS 121015 - 121440 698 ## PROTEIN SUPPORTED gi|228477974|ref|ZP_04062585.1| ribosomal protein L11 139 63 Op 2 . + CDS 121489 - 122229 1200 ## PROTEIN SUPPORTED gi|55737774|gb|AAV61416.1| 50S ribosomal protein L1 + Term 122233 - 122279 7.1 + Prom 122331 - 122390 6.5 140 64 Tu 1 . + CDS 122426 - 122890 405 ## COG1943 Transposase and inactivated derivatives + Term 122954 - 122989 5.6 + Prom 123059 - 123118 8.5 141 65 Tu 1 . + CDS 123174 - 125144 398 ## PROTEIN SUPPORTED gi|148984587|ref|ZP_01817855.1| hypothetical protein CGSSp3BS71_01047 + Prom 125169 - 125228 6.8 142 66 Tu 1 . + CDS 125326 - 126780 1845 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 126960 - 126994 -0.9 143 67 Tu 1 . + CDS 127167 - 127415 207 ## gi|228478036|ref|ZP_04062647.1| putative histidine kinase of the competence regulon, ComD + Term 127468 - 127521 2.1 + Prom 128518 - 128577 12.1 144 68 Tu 1 . + CDS 128738 - 129937 1573 ## COG0137 Argininosuccinate synthase + Term 130129 - 130178 -0.2 + Prom 130156 - 130215 4.4 145 69 Op 1 . + CDS 130264 - 131664 1278 ## COG0165 Argininosuccinate lyase 146 69 Op 2 22/0.000 + CDS 131733 - 132068 105 ## COG0594 RNase P protein component 147 69 Op 3 16/0.000 + CDS 132137 - 132991 715 ## COG0706 Preprotein translocase subunit YidC 148 69 Op 4 . + CDS 133003 - 134052 841 ## COG1847 Predicted RNA-binding protein + Term 134135 - 134179 11.6 - Term 134071 - 134125 1.2 149 70 Tu 1 . - CDS 134129 - 134344 195 ## COG2801 Transposase and inactivated derivatives - Prom 134465 - 134524 5.5 + Prom 134184 - 134243 7.6 150 71 Op 1 . + CDS 134294 - 134497 99 ## 151 71 Op 2 . + CDS 134556 - 134690 220 ## PROTEIN SUPPORTED gi|15674431|ref|NP_268605.1| 50S ribosomal protein L34 + Term 134692 - 134746 8.4 + Prom 134799 - 134858 5.4 152 72 Tu 1 . + CDS 135059 - 135340 206 ## COG1943 Transposase and inactivated derivatives + Term 135527 - 135561 -0.4 + Prom 135587 - 135646 6.5 153 73 Tu 1 . + CDS 135721 - 136863 675 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Term 136876 - 136906 -0.4 + SSU_RRNA 137556 - 139090 99.0 # AY188352 [D:1..1546] # 16S ribosomal RNA # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 139152 - 139224 84.6 # Ala TGC 0 0 + LSU_RRNA 139371 - 141827 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. Predicted protein(s) >gi|311101983|gb|AEKO01000002.1| GENE 1 31 - 420 354 129 aa, chain - ## HITS:1 COG:no KEGG:SSUSC84_0776 NR:ns ## KEGG: SSUSC84_0776 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_SC84 # Pathway: not_defined # 19 129 21 134 134 83 44.0 2e-15 MKKAIILLLTLLTTTILVACGTSSNNTKLSGVYSYTGKTFSDENHDGQLKLYYELDVNDT KSIYRIVAQDKDGETVQHVYGERVTIDSKKQVIKDFKGHEFKYTVSGDSVTVPDLAGNAV NGDTVTLTK >gi|311101983|gb|AEKO01000002.1| GENE 2 443 - 1264 654 273 aa, chain - ## HITS:1 COG:no KEGG:SSU05_0868 NR:ns ## KEGG: SSU05_0868 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 273 1 279 279 208 53.0 2e-52 MKKKRSLLGITLLASATLLVACQSKPNSTTSVEKSSTKTSSSKTDDNALSEEKRKRSLTK FYEEFPAEQAARYQGTIDERSEKAWNSNQPNIFAGQASLKIHDDYLENDELKKLEVKIDG YDESTRRLKLTVTNHYDTTLRGTRFSNNLYDYGTYFTLRSYSTTSGRAGNINIMQLALAD DLEAGKSITLEVLPKYYQDRELGFKNPKLDSKYYLLSTDYSAELWDKTANEQVSEDFLLS NQANIYIVPKLTFSKFPSTAPSDKELKEILSKN >gi|311101983|gb|AEKO01000002.1| GENE 3 1411 - 1578 169 55 aa, chain + ## HITS:1 COG:no KEGG:LSL_1395 NR:ns ## KEGG: LSL_1395 # Name: not_defined # Def: hypothetical protein # Organism: L.salivarius # Pathway: not_defined # 1 55 1 55 55 87 96.0 9e-17 MAFQLKSNRKETENKTIRFPLPLIEEIEKAIQNEDVTFSSFVIQACEYALRDMEK >gi|311101983|gb|AEKO01000002.1| GENE 4 1650 - 1922 171 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNPDQFLKDIQGKNINFLIGSGASFGVVPTLWVESLGKSFEELLTSEDFNAEQKRYYILF GLNSGFVKQEYWNLIIATRLIENMNDLLII >gi|311101983|gb|AEKO01000002.1| GENE 5 2003 - 2824 206 273 aa, chain + ## HITS:1 COG:no KEGG:PC1_3280 NR:ns ## KEGG: PC1_3280 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 7 232 129 330 371 156 39.0 8e-37 MIFDRLSKDNRLTYFNDGSRGFFKKFISTENYHLKVSHSGVSDTFQREIPTINLLKIHGS ITWQKINDEIEVSLENELFNKLLELSDNIITSIKEFNLNNFPFEENDFISPEDYEQEILY GELTEEEFSEELKRLFEKFPTEINSFYNTYKLFPVVNPTKEKFSDTVFQQHYYQLLRMLS FELEKQDSILVVFGFSFADEHILEIVRRSIVNPKLKIYVVAFNKNARSLIQDKLGSLGGN IIEYLPATVSPDGKEIQGNFSYLNSLFDGKDKR >gi|311101983|gb|AEKO01000002.1| GENE 6 2821 - 4746 560 641 aa, chain + ## HITS:1 COG:TVN0229 KEGG:ns NR:ns ## COG: TVN0229 COG0433 # Protein_GI_number: 13541060 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Thermoplasma volcanium # 425 619 291 483 518 82 28.0 3e-15 MIYQNYVVGTVREIKGTSVIIRLFDNSTQLTYFFNGKRYSGVMIGSYIGIKRGHYTIVVK VEKEYAQDSLHDSTIQEFSKDRFIREVEAKVIGSFVREKYMSGMVAFPQIFNDVILLPDE LITSIISGEDIGNKNPPSNPNSYFIIGDIWPEGIPYKIDWTKIFNTHIAIFGNTGSGKSN TLARLYKNLFDLSKESVLEFGESKFVFIDFNGEYVDRKVLTENKKVYNLSTRKSEIANKI LIPSNKFWDKEMLSILFGATAQTQQPFLNRLIKYYFGQNNFVDNTLEYFYRAFRIVYTTP LKESLDLLKYSLDILGINHEAFSNWIDYSAFNPSNSNSYYSTYELSGWNSNDNRRWFWNA DANAEALEKEIEGIKQRSTTFFSTGVKEKVSNPITQLRLSSCFQMIFELSRHTIQYDHIS PLIHRIEARSSDFDKVLEIIDTEEQNIQQIFSDKSINVVSLKNVNKDIKMLLPMLIAKIS YDIHRNQFEHDKIFNLIVDEAHNILSENSTVESEKWKDYRLDVFEEIVKEGRKFGYYLTI ASQRPSDISSTIVSQIHNYFIHRLVNDNDLKLLDRTMTSLDYVSKSSIPNLSAGQAIITG ISFDLPVIVKITQLSKEEAPNSSNSELLKIWNVNTNEEETH >gi|311101983|gb|AEKO01000002.1| GENE 7 4974 - 5123 251 49 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55821942|ref|YP_140384.1| 50S ribosomal protein L33 [Streptococcus thermophilus LMG 18311] # 1 49 1 49 49 101 100 2e-20 MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVIFTEVK >gi|311101983|gb|AEKO01000002.1| GENE 8 5139 - 5321 311 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|19747000|ref|NP_608136.1| 50S ribosomal protein L32 [Streptococcus pyogenes MGAS8232] # 1 60 1 60 60 124 100 2e-27 MAVPARHTSKAKKNKRRTHYKLTAPSVQFDETTGDYSRSHRVSLKGYYKGRKIAKANEAK >gi|311101983|gb|AEKO01000002.1| GENE 9 5550 - 6662 1334 370 aa, chain + ## HITS:1 COG:L124252 KEGG:ns NR:ns ## COG: L124252 COG0620 # Protein_GI_number: 15672700 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Lactococcus lactis # 5 369 7 368 369 485 64.0 1e-137 MSKVHYHFDHVGSYLRPQALKEAREKFANGEISQEELLKVQDELVKELVHHEVENGLQVV SDGEFGRSWWHLDFLWNLTGFEAYQQEDSYKFHGAKTRTTNVRINGKIAENSNHPFYRDF EYLKSVTPEGITPKVTIPSPSLIINRDHRSDLYADYYDSWTDFLDDLAKAYHDTIQHFYD LGARYVQLDDTTWGYLIQQFENEKNNPEKTAELAKIAEDDVYTINKALKGLPEDLTLATH ICRGNFKSTYLFEGGYDSVAKYLGQLNYDIFFLEYDDARSGSFAPLPTIWNNRDHVELVL GVITSKDPNLENVDAVIDRIHAAAELVPLKNLGISTQCGFASTEEGNILTEQDEWNKLQL IKTITDKVWS >gi|311101983|gb|AEKO01000002.1| GENE 10 6911 - 7597 632 228 aa, chain + ## HITS:1 COG:SPy2157 KEGG:ns NR:ns ## COG: SPy2157 COG0124 # Protein_GI_number: 15675899 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 220 1 220 426 403 88.0 1e-112 MKLQKPKGTQDILPADSAKWQYVENVARETFKKYNYGEIRTPMFEHYEVISRSVGDTTDI VTKEMYDFHDKGDRHITLRPEGTAPVVRSYVENKLFAPEVQKPVKVYYIGSMFRYERPQA GRLREFHQLGVECFGSKNPATDVETIAMTYQLFNTLGIKDVTLHLNSLGNTESRLAYRQA LIDYLTPMRESLSKDSQRRLDENPLRVLDSKEKKIRLQLKMLHLSLII >gi|311101983|gb|AEKO01000002.1| GENE 11 7636 - 8190 682 184 aa, chain + ## HITS:1 COG:SPy2157 KEGG:ns NR:ns ## COG: SPy2157 COG0124 # Protein_GI_number: 15675899 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 182 243 424 426 281 74.0 5e-76 MLDSLNIPYVIDTNMVRGLDYYNHTIFEFVTTIDKSELTICAGGRYDSLVEYFGGPETAG FGFGLGLERLLLVLDKQGIELPEEESLDVYIAVLGSGANGKALELIQAIRYQGFKAERDY LGRKIKAQFKSADTFKAKTVITLGESEVESGQVNVKNNATREEVTVSFEELTKNFAAVLK QLEK >gi|311101983|gb|AEKO01000002.1| GENE 12 8198 - 8620 444 140 aa, chain + ## HITS:1 COG:no KEGG:str1970 NR:ns ## KEGG: str1970 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 140 1 140 140 236 95.0 1e-61 MVSIVDMLKRSEKFSLAFDRSMPIRFQQQFWQLIAFLDKHDITWFNDETASDHAMCQQLL GQVWHQDCQDVVLSFETQERYLGWQVDEETDELSVIIEDVYGFRWNSLLDLETADYRFED FEEFAEDYVDTSDLLKQFGK >gi|311101983|gb|AEKO01000002.1| GENE 13 8730 - 10481 2316 583 aa, chain + ## HITS:1 COG:SPy2156 KEGG:ns NR:ns ## COG: SPy2156 COG0173 # Protein_GI_number: 15675898 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 579 1 579 582 997 85.0 0 MERSMYAGRVRSEHIGTTITLKGWVSRRRNLGGLIFIDLRDREGLMQLVVNPENADANVV ETAESLRSEFVIEVTGTVEAREQANANLPTGAVELKVEDLKVLNTAKTTPFEIKDGVEAS DDTRMRYRYLDLRRPEMLENFKLRAKVTHAIRNYLDDLEFIDVETPMLTKSTPEGARDYL VPSRVNQGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETS FLNEQEIQDITEGLIAKVMKETKGIEVTLPFPRMSYDDAMNNYGSDKPDTRFDMLLQDLT EVVKGVDFKVFAEAPAVKAIVAKGNADKYSRKSIDKLTEFAKQFGAKGLAWVKMTDGALA GPVAKFLTSIEDKLTDTLHLEENDLVLFVADTHEIANNTLGALRNQIAKELDMIDNTKFN FLWVVDWPMFEWSEEEGRYMSAHHPFTLPTEDSAAELEGDLSKVRAVAYDIVLNGYELGG GSLRINHKDLQERMLKALGFSEESAYEQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGK DNIREVIAFPKNNKASDPMTQAPSLVADKQLEELALHVDLENE >gi|311101983|gb|AEKO01000002.1| GENE 14 10474 - 11415 764 313 aa, chain + ## HITS:1 COG:SPy2155 KEGG:ns NR:ns ## COG: SPy2155 COG1284 # Protein_GI_number: 15675897 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 16 312 17 313 313 449 77.0 1e-126 MNKAPLHKHVKFVAKKSAKKMGILQAARSISREKYTEKVSASLLYGLLSSIAVNFFFQPG HVYSSGATGLAQVLSALSVRTLGFEIPVSLTFYAINIPLLILAWYKIGHKFTIFTFITVT MSSLFIQAMPHVTLTEDPLINAIFGGLVMGTGIGFGLKSRISSGGTDIVSLTIRKKTGRD VGNISLIVNGIIMIFAGILFGWKYALYSMVTIFVSSRVTDAIFTKQKKMQAMIVTSNPDP VVRMIQKKLHRGVTLINDAEGTYNHEKKAVLLAIITREEYTDFKHYMRKADPKAFVSIAE NVHILGRFVDLDD >gi|311101983|gb|AEKO01000002.1| GENE 15 11535 - 12242 279 235 aa, chain + ## HITS:1 COG:SPy2104 KEGG:ns NR:ns ## COG: SPy2104 COG3022 # Protein_GI_number: 15675856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 12 231 23 241 243 247 56.0 1e-65 MKPLDEVPYQKISEKSVAILKEMAKLSTDDLSTVYNIKPEQARKEKQRWDRILSGEARSY PAIELFNGLMYRHIKRSDLSTCEKDFLSQQVFITSSFYGIIPAFYSIQEHRHDFHTKVKV NGQSLKNYWRSEYDKFLEESQVSVVSLLSNEFEDVFSPSLRKQLFTVSFMEDRNGLLKTH STISKKARGAFLTAVMKENCRTIDALRELSFDEFYYRKDLSSDSELVFVKKVKKA >gi|311101983|gb|AEKO01000002.1| GENE 16 12262 - 12867 540 201 aa, chain - ## HITS:1 COG:SPy2105 KEGG:ns NR:ns ## COG: SPy2105 COG0602 # Protein_GI_number: 15675857 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pyogenes M1 GAS # 3 201 6 204 204 361 84.0 1e-100 MTWNTPKPQEWKSEELSLGRIIDYKAFNFVDGEGVRNSLYVSGCMFHCKGCYNAATWSFK AGIPYTKELEEQIMRDLAQPYVQGLTLLGGEPFLNTGILIPLVKRIHKELPEKDIWSWTG YTWEELMLETPDKLELLHLVDILVDGRFDITKKNLMLQFRGSSNQRIIDVKKSLDQGKVV IWDKLNDGQNNYEQVDRKDMI >gi|311101983|gb|AEKO01000002.1| GENE 17 12872 - 13372 272 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 [Mesoplasma florum L1] # 5 163 7 169 170 109 38 8e-23 MILRRPSQTDKEAILDMMTEFEREKSSHDGGFWNPDNFVYEEWLEENLQAEAGLNIPENW VPAIQLVSFDEAGHALGFLNLRLRLNDYLLEKGGHIGYSIRPSERGKGYAKESLRQGLQI AKEKNIHRVLVTCSIKNPASRVVILANGGQLEDIRHETERYWIDLE >gi|311101983|gb|AEKO01000002.1| GENE 18 13374 - 13505 150 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKYQLDYKGMQQVERYHEKNATVKNDKKARVQALLKKAGKKK >gi|311101983|gb|AEKO01000002.1| GENE 19 13595 - 15799 1948 734 aa, chain - ## HITS:1 COG:SPy2110 KEGG:ns NR:ns ## COG: SPy2110 COG1328 # Protein_GI_number: 15675860 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 731 1 731 732 1318 84.0 0 MITLEKEKVTINPDIKVIKRDGRMVVFDSSKIYEAILKASEAITPITPIIETKLEGIATH ILAEINDRFSHNIKIYEIQSIVEHELLEANEYAIAQEYINYRTKRDFERSQATDINFTIN KLVNKDQAVVHENANKDSDLYNTQRDLTAGIVGKSVGLKMLPPHVANAHQKGDIHFHDLD YSPYTPMTNCCLIDFKSMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA DRIDEFLAPYAELNYKKHLADAKEWVTEEKQEDYARAKTRKDIYDAMQSLEYEINTLFTS NGQTPFTSLGFGLGTNWFEREIQKAILQVRILGLGSEHRTAIFPKLIFTLKRGLNLEPNS PNYNIKQLALECATKRMYPDILSYDKIIELTGSFKAPMGCRSFLQGWKDENGVEVNSGRM NLGVVTLNLPRIALESKGDQDKFWEIFEERIGIAKDALVYRVERVKEATPANAPILYQYG AFGQRLGKFDNVDQLFKHRRATVSLGYIGLYEVAAVFYGSDWETNLEAKTFTINIVKAMK NACESWSDEYDYHFSVYSTPSESLTDRFCRLDTEKFGVVTDITDKEYYTNSFHYDVRKNP TPFEKLEFEKAYPEAGATGGFIHYCEYPVLQQNPKALESVWDFAYDRVGYLGTNTPIDKC YKCDFEGDFTPTERGFMCPNCGNTDPKTVDVVKRTCGYLGNPQARPMVKGRHKEISARVK HMNGSTIKYEGKHL >gi|311101983|gb|AEKO01000002.1| GENE 20 15897 - 17543 1030 548 aa, chain - ## HITS:1 COG:no KEGG:stu1962 NR:ns ## KEGG: stu1962 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 548 1 548 548 910 89.0 0 MSPYNKDNTLDSSGYQGYHRSHHRSHTQDNQSEKIEVTIQGHTDDSNSSQTEKKTKISIP RKHKGHILILSLILSIFSISVPYFTDFSNNIQSQNLYIAKMFANGSLPYSDFFATGGFFY YFLVSLAFRLGSTLWLIPIQTLTYYLSGTYLYKTVMHMTSNKEIATLISIIFFVINGTFG FGGLYPIQFAMPFVLGAIFFLTRYFAGYSRDEAFILYGFAGTAGALFEARTLIFWILSLV TIFIYNLVNKHFARGFYQVLCIIFGNILVLYLCLYFILNLQITSDYVNQVLVYNFTQLTV EKNNFLLTLAYQSFAVIGSGLLIGALTTSNHLMGYAKDKSIKWVLLLSFIFTVVYSLFSQ SFGLYSILNIVPYGLVLTALSLDDAIKKRAKRTSHRRRNANQIHTLKVFGIFLSRNYFLP IIVFAFAFAMPIIMFLFNLGNNAERSTVANYLAKNTKKDETIYVYDSSAKIYLKSNRKSA SPFVLPELNTAKPSHQKALLDTLIQDSAQYIVVQQDTQLPSEVKSTLSKNYKKAPVKGVE QYTVYVLK >gi|311101983|gb|AEKO01000002.1| GENE 21 17756 - 18061 447 101 aa, chain - ## HITS:1 COG:SPy2112 KEGG:ns NR:ns ## COG: SPy2112 COG3906 # Protein_GI_number: 15675862 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 101 1 101 101 144 91.0 3e-35 MSHNHDHNHDHEVITLVDEQGNETLFEILLTIDGREEFGKNYVLLVPAGAEEDANGEIEI QAYSFTENEDGTEGDLQPIPEDSDAEWDMIEEVFNSFIDEN >gi|311101983|gb|AEKO01000002.1| GENE 22 18169 - 18588 595 139 aa, chain - ## HITS:1 COG:SPy2113 KEGG:ns NR:ns ## COG: SPy2113 COG0816 # Protein_GI_number: 15675863 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Streptococcus pyogenes M1 GAS # 1 139 1 139 139 219 79.0 1e-57 MRVMGLDVGSKTVGVAISDPLGFTAQGVEIIKIDEEAEEFGFDRLGELVKEYKVEKFVVG LPKNMNNTEGPRVEASKAYGDKIKEIFEIPVDYQDERLTTVQAERMLVEQADVSRGKRKK VIDKLAAQLILQNYLDRMF >gi|311101983|gb|AEKO01000002.1| GENE 23 18588 - 18854 404 88 aa, chain - ## HITS:1 COG:SPy2114 KEGG:ns NR:ns ## COG: SPy2114 COG4472 # Protein_GI_number: 15675864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 88 1 88 89 144 88.0 4e-35 MGFTDETVRFNLDDGSKDEISNTLTNVYRSLAEKGYNPINQIVGYVLSGDPAYVPRYNDA RNQIRKYERDEIVEELVRYYLKGNGIDL >gi|311101983|gb|AEKO01000002.1| GENE 24 18979 - 19167 317 62 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228478059|ref|ZP_04062670.1| ribosomal protein L28 [Streptococcus salivarius SK126] # 1 62 1 62 62 126 100 5e-28 MAKVCYFTGRKTVSGNNRSHAMNKTKRAVKPNLQKVTILVDGKPKKVWASARALKSGKVE RV >gi|311101983|gb|AEKO01000002.1| GENE 25 19337 - 20605 1550 422 aa, chain + ## HITS:1 COG:SPy1992 KEGG:ns NR:ns ## COG: SPy1992 COG2256 # Protein_GI_number: 15675782 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Streptococcus pyogenes M1 GAS # 1 421 1 421 422 736 88.0 0 MPDNLALRMRPRTISEVIGQKHLVGEGKIICRMVEANMLSSMILYGPPGIGKTSIASAIA GTTKFAFRTFNATVDSKKRLQEIAEEAKFSGSLVLLLDEIHRLDKAKQDFLLPLLENGNI IMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAILGVLEDKERGFDFDVQLDEDA LDFIATATNGDLRSAYNSLDLAVMSTPASEDGFRHITLDTVENSLQRSYITMDKDGDGHY DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTA LEAAQKVGFPEARILIANVVVDLALSPKSNSAYMAMDAALADLRKSGNLPIPRHLRDGHY AGSKELGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQPNETGKYERALGANKERIDKL SR >gi|311101983|gb|AEKO01000002.1| GENE 26 21046 - 22185 455 379 aa, chain - ## HITS:1 COG:L47248 KEGG:ns NR:ns ## COG: L47248 COG0582 # Protein_GI_number: 15672418 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 5 369 3 375 377 156 30.0 6e-38 MASVRYRKRGDSNLWTYEIRNEGKTVAHNSGFKTKKLAESEAEPILQELRLGKRISRDIS LVDLYQEWLELKILPSSRSEETKKKYLLRKNTIERLFGNKKVTQIRASEYQRIMNKYGQT VGRNFLGRLNTGIHQSIQMAIADKVLIDDFTQHVELFSSKEQQMTEEKYLHTEKDYLDLL LAVKRKFDYQRSIVPYIVYFLLKTGMRFGELIALTWNEVDFDRGLLKTYRRFNTLSHKFV PPKNKTSIRMVPIDEECIKILQVLKIEQEKANKELGIKNRYKMIFQHYGYIHMVPDIASV NKALSVLLNELDIYPIITTKGARHTYGSYLWHKGFDLGVIAKILGHRDISMLVEVYGHTL EEKIFEEFNQIKDVWKDCS >gi|311101983|gb|AEKO01000002.1| GENE 27 22187 - 22375 358 62 aa, chain - ## HITS:1 COG:no KEGG:str1954 NR:ns ## KEGG: str1954 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 62 1 62 62 115 100.0 5e-25 MDNNLISNKELIEMGYRPHTANDIIHQARELLVSRGYTFYNRKRLMVVPKSVVNEILGTE VA >gi|311101983|gb|AEKO01000002.1| GENE 28 22506 - 23003 333 165 aa, chain - ## HITS:1 COG:no KEGG:str1953 NR:ns ## KEGG: str1953 # Name: rip # Def: replication initiator protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 159 121 279 325 304 95.0 7e-82 MYFARLNSLMVRLSRFDLAFDIFNRPDIVNLQHIKGGVTHKVFYGRGGELETKYWGSNGS NVQVRLYDKNKEIIAHKREEKLDLAVNPFWWRLEFQLRTKAIGEEMVQDIMNRLDNFGFY KLEHIRVEQRAFTIIFLNNPELLSLAFPNLKSDSIKKKKQESANY >gi|311101983|gb|AEKO01000002.1| GENE 29 23800 - 24312 467 170 aa, chain + ## HITS:1 COG:no KEGG:STER_1926 NR:ns ## KEGG: STER_1926 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 170 1 170 170 291 97.0 7e-78 MTFIIQNFGPNLARLRIEKGVSQTQLAEDLGIGKQSISDYEKQKSYPTFANLDKIAEYFN ATPTQLFGTSKEIELEKSVLESNEYSDKVSEILKAVKYIEDFLETDGQYLEDLLYLTRGN QLYTEDGDELYIDPTSQKRTLHNQYEPGFIVARDKSPLELLIENKELFDK >gi|311101983|gb|AEKO01000002.1| GENE 30 24531 - 25046 616 171 aa, chain + ## HITS:1 COG:no KEGG:SSA_0234 NR:ns ## KEGG: SSA_0234 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 171 1 171 171 174 88.0 2e-42 MKFSNRLLLFLAGVVFVLLGLFLFTNPVATLVAYSWWIAFGLLVSSIAAILGYFSAPKEL RSPVYLFQGFVSLLLALYLVAYGFLTLPVVIPTIVGIWLIVEAIIAFFKGNRLGLIFPII GSNIMWVALLEFLLGLVILFNPVATGVFVVYVIAFAFLVTGFTYIIEVFRK >gi|311101983|gb|AEKO01000002.1| GENE 31 25733 - 26338 833 201 aa, chain + ## HITS:1 COG:no KEGG:RMDY18_18410 NR:ns ## KEGG: RMDY18_18410 # Name: not_defined # Def: inorganic pyrophosphatase/exopolyphosphatase # Organism: R.mucilaginosa # Pathway: not_defined # 1 199 46 244 247 202 51.0 4e-51 MENVVVSIFDIESEAFQAFSELKQFGQTENTKLAQASIVKAENGVVNVKDSFDLMDSLGD DYFEGGLIGSLIGILGGPLGVLFGFAAGGAIGASVGSDKELANSVLITTVSNKLTNGEVA IIALVQENDESVLNSIFEKYQVHIARWDVATVAAEIESALKIQEDLEHQAKARLIADKKE ARREKFDKLKANIKEKFSKKN >gi|311101983|gb|AEKO01000002.1| GENE 32 26427 - 26783 187 118 aa, chain + ## HITS:1 COG:no KEGG:STER_1926 NR:ns ## KEGG: STER_1926 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 118 52 169 170 189 91.0 2e-47 MDKIAEYFNATPTQLFGTSKEIELEKSVLESNEYSDKVSEILKAVKYIEHFLHTDGQYLE DLLYLTRGNQLYTEDGKELYIDPTSQKRTLHTQYEPGFIEARDKSPLELLIENKELLD >gi|311101983|gb|AEKO01000002.1| GENE 33 26997 - 27122 84 41 aa, chain + ## HITS:1 COG:no KEGG:SSA_0230 NR:ns ## KEGG: SSA_0230 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 41 1 41 381 70 97.0 2e-11 MTTLIKHKRVEFSELFYDLVFVFAISKVTTLIDHLHNGILT >gi|311101983|gb|AEKO01000002.1| GENE 34 27234 - 28142 696 302 aa, chain + ## HITS:1 COG:SA0341 KEGG:ns NR:ns ## COG: SA0341 COG4292 # Protein_GI_number: 15926054 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 1 286 85 367 377 82 28.0 1e-15 MFIKMGILLFIANMIGPDWQQYFHYLCWAIGTLTLTLFFQYLVEFFRKSTDDANRESIKG FLWITGLGSLGFYLAALLPIYLRVYILFASILLTFIMPSILLNKDKHYQVNLPHLIERIS LLVIIMFGEMITELANFFTIENFSIYSVLYFIIMISLFLFYFGQFDHAIDEKSNQKGLFL IYSHYPIFIGLLMMTVSMSFLLNPEANRLFATSFSYIGFGLFQAAVLANGPYNKNYLRYS RSYYCAQATLYLAALILSLVFASNPTIVLSIATIFALAIAIHFIYFYVTQNKKYSKSNWG FF >gi|311101983|gb|AEKO01000002.1| GENE 35 28639 - 29148 209 169 aa, chain + ## HITS:1 COG:SPy1995 KEGG:ns NR:ns ## COG: SPy1995 COG0563 # Protein_GI_number: 15675784 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Streptococcus pyogenes M1 GAS # 1 164 1 164 168 224 65.0 5e-59 MKIAIIGYSSSGKSTLASFLGQHYNCEVLHLDKIHFTSNWKERTVNEMTDDISKFMLQKD WIIEGNYSACLYEERMREADCIIYFNFNRVNCLYRAFRRYLKYKGRTRPSMAENCNEKFD FEFVKWILLDGHSQKNVTKFKVAVKKYPDKTIVLKNQKQLNDYIMKKVK >gi|311101983|gb|AEKO01000002.1| GENE 36 29412 - 30704 1599 430 aa, chain + ## HITS:1 COG:SPy0160 KEGG:ns NR:ns ## COG: SPy0160 COG0104 # Protein_GI_number: 15674367 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 430 1 430 430 816 93.0 0 MTSVVVVGTQWGDEGKGKITDFLSQDAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIF FPEKISVIGNGVVVNPKSLVKELEYLHAEGVSTESLRISDRAHVILPYHIKLDQLQEAAK GDNKIGTTNKGIGPAYMDKAARVGIRIADLLDKEIFASRLKTNLAEKNRLFSKMYESEEL SFDEIFEEYYAYGQQIKQYVTDTSVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSS NPVAGGVTIGSGVGPSKINKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTT GRPRRVGWFDSVVMRHSRRVSGITNLSLNCIDVLSGFDTVKICVAYDLDGERIDYYPASL EQLKRCKPIYEELPGWEEDITGCRSLDELPENARNYVRRVGELVGVRISTFSVGPGREQT NILESVWSNI >gi|311101983|gb|AEKO01000002.1| GENE 37 30986 - 31420 199 144 aa, chain + ## HITS:1 COG:SPy0039 KEGG:ns NR:ns ## COG: SPy0039 COG0394 # Protein_GI_number: 15674281 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 144 1 144 145 190 60.0 7e-49 MNKVVFVCLGNICRSPMAEFVMKAFDQDGSLHIESRATSSWEHGNPVHQGTQKILRQYAV SFDSSKSSQQISRSDFEFFDLILGMDESNVEDLLQVSAGRYDDKIKLFRPGGVPDPWYTG DFEETYNLVTAGCQDWLQWIKDRQ >gi|311101983|gb|AEKO01000002.1| GENE 38 31417 - 31821 338 134 aa, chain + ## HITS:1 COG:SP2027 KEGG:ns NR:ns ## COG: SP2027 COG4642 # Protein_GI_number: 15901848 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 14 133 15 134 136 124 51.0 5e-29 MNFKQLKNFDFKNIDRNRFERITVGIIILCALSLLLVTIKTQHSIKIDGTKITYKGQMQN HRLNGQGTLTYDNGDTYTGGFKNGSFNGKGTFKSHEGWTYEGEFKSGQADGQGKLTTENK AIYKGKFKQGIFKG >gi|311101983|gb|AEKO01000002.1| GENE 39 31818 - 33641 1801 607 aa, chain + ## HITS:1 COG:SPy0041 KEGG:ns NR:ns ## COG: SPy0041 COG1835 # Protein_GI_number: 15674283 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 603 1 591 591 623 52.0 1e-178 MRINWFSYIRVTGLFLVLVYHFFPSILPGGFIGVDVFFTFSGYLITSLLIDEVARTQRID YLGFMRRRFYRIVPPLVLMVLICTPLALLVRNDFIAGVGRQITSVIGFVTNYYEILTGGN YENQFNQHIYLHTWSLAIEVHYYILWGALLWFLAKRVKHQNQFRGLVFMVSLTCFTVSFL SMFVSAFFVDGFSRLYFSSITHAYPFFLGSLFATLSGVHETTARFKKNVRLWELKKTVLY MVGSFALLLLLGLVLHFEERITYLFGFVLASLFTAVMIYSARILHEKLPGKSEPAVISYL AEISYSVYLFHWPLYIIFSQLTNNIIAVILTTILSIVFATLSYYIIEPFIAGRKASIFGI DLDLTPYRHIVLYVFSGLTLITVLISLFAPAVGSFEKDLEANGLSQAQTKMKLTRTNAEN SQATSFGVNKGVTILGDSVALRSKDQIESSIDNVAIDAVVSRNLSTINDLLKDYADSNAL AKDVVIAGGVNEIDDYKGVINKIIKNLPKGHRIIFVTPYNGSKSGNEAASLVQLRKYELE MAKKYDFVTVADWYQIAKENISIWNGTDGVHFGSDSDSINRGAKLYTNTIKEAIAKANKK PVKGGKK >gi|311101983|gb|AEKO01000002.1| GENE 40 33732 - 34733 1162 333 aa, chain + ## HITS:1 COG:SP0259 KEGG:ns NR:ns ## COG: SP0259 COG2255 # Protein_GI_number: 15900193 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 332 1 332 332 571 87.0 1e-163 MARILDNDLLGDEEYVERTLRPQYFKEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGP PGLGKTTMAFVIANEMGVNLKQTSGPAIEKAGDLVAILNDLEPGDILFIDEIHRMPMAVE EVLYSAMEDYYIDIMIGAGETSRSVHLDLPPFTLVGATTRAGMLSNPLRARFGINGHMEY YELPDLTEIVERTSEIFEMTITPEAALELARRSRGTPRIANRLLKRVRDYAQIMGDGIID DKIADKALTMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEP YLIQKGFIMRTRTGRVATVKAYEHMGYDYTQES >gi|311101983|gb|AEKO01000002.1| GENE 41 34976 - 35284 511 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821906|ref|YP_140348.1| 30S ribosomal protein S10 [Streptococcus thermophilus LMG 18311] # 1 102 1 102 102 201 100 2e-50 MANKKIRIRLKAYEHRTLDTAAEKIVETATRTGATVAGPVPLPTERSLYTIIRATHKYKD SREQFEMRTHKRLIDIINPTQKTVDALMKLDLPSGVNVEIKL >gi|311101983|gb|AEKO01000002.1| GENE 42 35398 - 36024 1056 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126] # 1 208 1 208 208 411 100 1e-113 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL SNKPAKGHVAKANTAPKRFIREFKNIEGLEVGSEITVDTFEAGDVVDVTGTSKGKGFQGV IKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKHLAGRMGGNRVTIQNLEVVQVIPE KNVILIKGNVPGAKKSLITIKSAVKAAK >gi|311101983|gb|AEKO01000002.1| GENE 43 36049 - 36672 1012 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821904|ref|YP_140346.1| 50S ribosomal protein L4 [Streptococcus thermophilus LMG 18311] # 1 207 1 207 207 394 99 1e-108 MANVKLFDQTGKEVSTVELNDAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGG GRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAE DKFVAVEALSFVAPKTAEFANVLSALSIDSKVLVIVEEGNKFAELSARNLANVTVATPAT ASVLDIVNADKLLVTKEAISSIEEVLA >gi|311101983|gb|AEKO01000002.1| GENE 44 36672 - 36968 476 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821903|ref|YP_140345.1| 50S ribosomal protein L23 [Streptococcus thermophilus LMG 18311] # 1 98 1 98 98 187 100 2e-46 MNLYDVIKKPVITEKSMIALEAGKYTFEVDTRAHKLLIKQAVEAAFEGVKVASVNTVTVK PKQKRVGRYTGFTSKTKKAIITLTADSKAIELFAAEAE >gi|311101983|gb|AEKO01000002.1| GENE 45 36986 - 37819 1427 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478123|ref|ZP_04062734.1| ribosomal protein L2 [Streptococcus salivarius SK126] # 1 277 1 277 277 554 98 1e-156 MGIKVYKPTTNGRRNMTSLDFAEITTSTPEKSLLVSLKNKAGRNNNGRITVRHQGGGHKR HYRLIDFKRNKDGVEAVVKTIEYDPNRTANIALVHYTDGVKAYIVAPKGLEVGQRIVSGP DADIKIGNALPLANIPVGTVIHNIELQPGKGAELIRAAGASAQVLGQEGKYVLVRLQSGE VRMILGTCRATIGTVGNEQQSLINLGKAGRNRWKGIRPTVRGSVMNPNDHPHGGGEGKAP VGRKAPSTPWGKPALGLKTRNKKAKSDKLIVRRRNEK >gi|311101983|gb|AEKO01000002.1| GENE 46 37913 - 38191 487 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674291|ref|NP_268464.1| 30S ribosomal protein S19 [Streptococcus pyogenes M1 GAS] # 1 92 1 92 92 192 100 1e-47 MGRSLKKGPFVDEHLMKKVEAQANDEKKKVIKTWSRRSTIFPSFIGYTIAVYDGRKHVPV YIQEDMVGHKLGEFAPTRTYKGHAADDKKTRR >gi|311101983|gb|AEKO01000002.1| GENE 47 38207 - 38551 554 114 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821900|ref|YP_140342.1| 50S ribosomal protein L22 [Streptococcus thermophilus LMG 18311] # 1 114 1 114 114 218 100 2e-55 MAEITSAKAMARTVRVSPRKTRLVLDLIRGKNVADAIAILKFTPNKAARIVEKTLNSAIA NAENNFGLEKANLVVSETFANEGPTMKRFRPRAKGSASPINKRTTHVTVVVSEK >gi|311101983|gb|AEKO01000002.1| GENE 48 38564 - 39217 1106 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478008|ref|ZP_04062619.1| ribosomal protein S3 [Streptococcus salivarius SK126] # 1 217 1 217 217 430 99 1e-119 MGQKVHPIGMRVGIIRDWDAKWYAEKEYADYLHEDLAIRKFIQKELADASVSTIEIERAV NKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETIA RQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRAD IDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTKGGK >gi|311101983|gb|AEKO01000002.1| GENE 49 39221 - 39634 712 137 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22536250|ref|NP_687101.1| 50S ribosomal protein L16 [Streptococcus agalactiae 2603V/R] # 1 137 1 137 137 278 100 8e-74 MLVPKRVKHRREFRGKMRGEAKGGKEVSFGEYGLQATTSHWITNRQIEAARIAMTRYMKR GGKVWIKIFPHKSYTAKAIGVRMGSGKGAPEGWVAPVKRGKVMFEIAGVSEEVAREALRL ASHKLPVKCKFVKREAE >gi|311101983|gb|AEKO01000002.1| GENE 50 39644 - 39850 324 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478030|ref|ZP_04062641.1| ribosomal protein L29 [Streptococcus salivarius SK126] # 1 68 1 68 68 129 100 8e-29 MKLEEIKKFVAELRGLSQEELAKKENELKKELFDLRFQAAAGQLDQTARLNEVKKQIARV KTVQSEIK >gi|311101983|gb|AEKO01000002.1| GENE 51 39878 - 40138 430 86 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628589|ref|YP_821208.1| 30S ribosomal protein S17 [Streptococcus thermophilus LMD-9] # 1 86 1 86 86 170 100 4e-41 MERNQRKTLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIV RIMETRPLSATKRFRLVEVVEEAVII >gi|311101983|gb|AEKO01000002.1| GENE 52 40163 - 40531 604 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477998|ref|ZP_04062609.1| ribosomal protein L14 [Streptococcus salivarius SK126] # 1 122 1 122 122 237 100 3e-61 MIQQESRLKVADNSGAREILTIKVLGGSGRKFANIGDVIVATVKQATPGGAVKKGDVVKA VIVRTKTGARRPDGSYIKFDDNAAVIIRDDKTPRGTRIFGPVARELREGGYMRIVSLAPE VL >gi|311101983|gb|AEKO01000002.1| GENE 53 40612 - 40917 504 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628587|ref|YP_821206.1| 50S ribosomal protein L24 [Streptococcus thermophilus LMD-9] # 1 101 1 101 101 198 100 1e-49 MFVKKGDKVRVIAGKDKGTEAVVLKALPKVNKVVVEGVAIIKKHQKPSAENPQGAIVEKE APIHASNVQVLDKNGVAGRVGYKVVDGKKVRYNKKSGEVLD >gi|311101983|gb|AEKO01000002.1| GENE 54 40944 - 41486 899 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628586|ref|YP_821205.1| 50S ribosomal protein L5 [Streptococcus thermophilus LMD-9] # 1 180 1 180 180 350 100 2e-95 MANRLKEKYTNEVIPALTEKFNYSSVMAVPKVDKIVINMGVGEAVNNAKTLEKAAAELAL ISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPT KSFDGRGNYTLGVKEQLIFPEINFDDVDKVRGMDIVIVTTANTDEEGRELLKGLGMPFAK >gi|311101983|gb|AEKO01000002.1| GENE 55 41504 - 41689 329 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477968|ref|ZP_04062579.1| ribosomal protein S14p/S29e [Streptococcus salivarius SK126] # 1 61 1 61 61 131 98 2e-29 MAKKSMIAKNKRPAKFSTQAYTRCERCGRPHSVYRKFKLCRVCFRELAYKGQIPGVTKAS W >gi|311101983|gb|AEKO01000002.1| GENE 56 41812 - 42210 660 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477967|ref|ZP_04062578.1| ribosomal protein S8 [Streptococcus salivarius SK126] # 1 132 1 132 132 258 100 8e-68 MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIAEILKREGFVKNVEVIEDDKQGII RVFLKYGQNGERVITNLKRISKPGLRVYSKREDVPKVLNGLGIAIISTSEGLLTDKEARQ KNVGGEVIAYVW >gi|311101983|gb|AEKO01000002.1| GENE 57 42337 - 42873 902 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478090|ref|ZP_04062701.1| ribosomal protein L6 [Streptococcus salivarius SK126] # 1 178 1 178 178 352 99 7e-96 MSRIGNKVITLPAGVEVTNNDNVVTVKGPKGELTREFNKNIEIKVEGNEVTLHRPNDSKE NKTIHGTSRANLNNMVVGVSEGFKKELEMRGVGYRAQLQGTKLVLSVGKSHQDEVEAPEG ITFEVPSATSIVVSGINKEVVGQTAAYIRSLRSPEPYKGKGIRYVGEYVRRKEGKTGK >gi|311101983|gb|AEKO01000002.1| GENE 58 42954 - 43319 591 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|73621712|sp|Q5LXS7|RL18_STRT1 RecName: Full=50S ribosomal protein L18 # 1 121 1 121 121 232 97 8e-60 MKIVISKPDKNKLRQKRHRRVRGKLSGTADRPRLNIFRSNTGIYAQVIDDVAGVTLASAS TLDKEVSKGTKTEQAVVVGKLVAERAVAKGISEVVFDRGGYLYHGRVKALADSARENGLK F >gi|311101983|gb|AEKO01000002.1| GENE 59 43338 - 43832 791 164 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477953|ref|ZP_04062564.1| ribosomal protein S5 [Streptococcus salivarius SK126] # 1 164 1 164 164 309 100 5e-83 MAFKDNAVELEERVVAINRVTKVVKGGRNMRFAALVVVGDRNGRVGFGTGKSQEVPEAIR KAVEAAKKNLIEVPMVGTTIPHEVRSEFGGAKVLLKPAVEGAGVAAGGAVRAVIELAGVA DVTSKSLGSNTPINIVRATVEGLKQLKRAEEVAALRGISVSDLA >gi|311101983|gb|AEKO01000002.1| GENE 60 43580 - 43903 501 107 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|77406115|ref|ZP_00783189.1| ribosomal protein [Streptococcus agalactiae H36B] # 1 107 1 107 107 197 89 2e-49 MFWFASDWRLSQSNFNLSHCYLLSYAKSDTEMPRRAATSSARLSCFNPSTVARTMLIGVF EPSDLDVTSATPANSMTARTAPPAATPAPSTAGFNNTFAPPNSERTS >gi|311101983|gb|AEKO01000002.1| GENE 61 43847 - 44029 289 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478046|ref|ZP_04062657.1| ribosomal protein L30 [Streptococcus salivarius SK126] # 1 60 1 60 60 115 100 9e-25 MAQIKITLTKSPIGRKPEQRKTVVALGLGKLNSSVVKEDNAAIRGMVNAVSHLVTVEDVK >gi|311101983|gb|AEKO01000002.1| GENE 62 44112 - 44597 771 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55737871|gb|AAV61513.1| 50S ribosomal protein L15 [Streptococcus thermophilus LMG 18311] # 1 161 1 161 161 301 95 1e-80 MVRGASILQKEEKIIMKLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGG VRPGFEGGQTPLFRRLPKRGFTNINAKEYALVNLDQLNVFEDGTEVTPAVLKEAGIVRAE KSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI >gi|311101983|gb|AEKO01000002.1| GENE 63 44614 - 45909 719 431 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 11 427 19 437 447 281 36 1e-74 MFFKLLKDALKVKNVRNKILFTIFIIFVFRVGTHVTVPGINAESLKQLSDLPFLNMLNLV SGNAMNNFSIFSMGVSPYITASIIVQLLQMDIYPRFVEWGKQGEVGRRKLNQATRYITLV LAFVQSIGITASFNTLSSISLVKTPNVSTYLLIGTILTAGSIIVTWLGEQITDKGFGNGV SMIIFSGIIASIPKMFSTIYEDFFVNVRSGELTRSYIIVVLLIVVGLAIVFFTTFVQQAE YQIPIQYTKLVQGAPTSSYLPLKVNPAGVIPVIFASSITTIPSTILPFFSKVTWLSNLQG LLSYNTPSGMLTYAILIILFSFFYTFVQVNPEKTAENLQKNGSYIPSVRPGRETEKYMSS LLKRLATIGAVFLAFISLAPIAAQQFMHLTSSIALGGTSLLILISTGIEGMKQLEGYLLK RQYVGFMNLED >gi|311101983|gb|AEKO01000002.1| GENE 64 46041 - 46679 878 212 aa, chain + ## HITS:1 COG:SPy0074 KEGG:ns NR:ns ## COG: SPy0074 COG0563 # Protein_GI_number: 15674308 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Streptococcus pyogenes M1 GAS # 1 212 1 212 212 359 85.0 2e-99 MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGTLAKSFIDKGELVP DEVTNGIVKERLAQDDIKEKGFLLDGFPRTIEQAHSLDQILVDLGLELDGVINIEVDPSC LLERLSGRIIHRETGETYHKVFNPPADYKEEDYYQREDDKPETVKRRLDVNIAQGEPIIA HYRELGLVSDIQGNQDIDDVFADVKKAIAAIK >gi|311101983|gb|AEKO01000002.1| GENE 65 46797 - 47015 347 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 138 93 2e-31 MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPY DLTRGRITYRFK >gi|311101983|gb|AEKO01000002.1| GENE 66 47041 - 47157 210 38 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674310|ref|NP_268483.1| 50S ribosomal protein L36 [Streptococcus pyogenes M1 GAS] # 1 38 1 38 38 85 100 1e-15 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG >gi|311101983|gb|AEKO01000002.1| GENE 67 47175 - 47540 597 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821881|ref|YP_140323.1| 30S ribosomal protein S13 [Streptococcus thermophilus LMG 18311] # 1 121 1 121 121 234 100 2e-60 MARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGVSEDIRVKDLTNDQEDAIRREV DAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKK K >gi|311101983|gb|AEKO01000002.1| GENE 68 47567 - 47950 636 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821880|ref|YP_140322.1| 30S ribosomal protein S11 [Streptococcus thermophilus LMG 18311] # 1 127 1 127 127 249 99 5e-65 MAKPTRKRRVKKNIESGIAHIHATFNNTIVMITDVHGNAVAWSSAGALGFKGSRKSTPFA AQMASEAAAKSAQEHGLKTVEVTVKGPGSGRESAIRALAAAGLEVTAIRDVTPVPHNGAR PPKRRRV >gi|311101983|gb|AEKO01000002.1| GENE 69 47999 - 48937 985 312 aa, chain + ## HITS:1 COG:SPy0080 KEGG:ns NR:ns ## COG: SPy0080 COG0202 # Protein_GI_number: 15674313 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Streptococcus pyogenes M1 GAS # 1 312 1 312 312 541 94.0 1e-154 MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL HEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVN PDHYLFTISEGASLKATMTVATNRGYVPADENKKDDAPVGTLAVDSIYTPVKKVNYQVEP ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTDVAKATDVMKETEK VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK LADLGLGLKNDK >gi|311101983|gb|AEKO01000002.1| GENE 70 48955 - 49341 625 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477997|ref|ZP_04062608.1| ribosomal protein L17 [Streptococcus salivarius SK126] # 1 128 1 128 128 245 99 1e-63 MAYRKLGRTSSQRKAVLRDLTTDLIINEAIVTTEARAKEIRKTVEKMITLGKRGDLHARR QAAAFVRNEIASENYDEATDKYTSTTALQKLFSEIAPRYAERNGGYTRILKTEPRRGDAA PMAIIELV >gi|311101983|gb|AEKO01000002.1| GENE 71 49591 - 50886 880 431 aa, chain + ## HITS:1 COG:SP2067 KEGG:ns NR:ns ## COG: SP2067 COG3572 # Protein_GI_number: 15901886 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 424 1 424 425 476 56.0 1e-134 MTTAKELLKQRYYEPIKEQPELFVGIELEYPVVNLSGNATDVSLTKRLLAYLLDNFDFQA DKYDSDNNPIQLIDKDSGDMILFEVSYNTIEFAFAKAERISEVEERLDTYLGIIQPYLQN DNHELQGWGVNPNWAKNDNRPVKSPRYEMLMDFLGLSKAKNNPFFHDYPEYGSFICGSQV QLDVSKTSYLRVLNAFNQIEGPKAVLLANSDFWGSDWDLALSRDVFWENSMHGVFKENAG VFPKVFKSEDDYFSYLSETAIFTAKRGDETYYFEPIRAKDYLSTPSVKARSIHGEVVTIE PSEEDFKTHRSYQFQDLTTRGTVEFRSVCTQPFSATFAPAAFHLGLLVNLETLESILKDT SLFEVFDYDYLRIRCLFSKKEISKDDFKLILPLTEALLTCAEDGLKNRGFGEEVYLAPLQ ERLAALKNRLD >gi|311101983|gb|AEKO01000002.1| GENE 72 51301 - 52182 1262 293 aa, chain + ## HITS:1 COG:SPy1889 KEGG:ns NR:ns ## COG: SPy1889 COG0191 # Protein_GI_number: 15675705 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Streptococcus pyogenes M1 GAS # 1 293 1 293 293 490 86.0 1e-138 MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKQAPVLIQTSMGAAKYMGGY KLCKLLIEELVESMGITVPVAIHLDHGHYNDALECIRVGYTSVMFDGSHLPVEENLEKAA KVVEFAHANGVSVEAEVGTIGGEEDGIIGDGELAPIEDAKAMVATGIDFLAAGIGNIHGP YPENWNGLHLDHLQKLTEAVPNFPIVLHGGSGIPDDQIQAAIKLGVAKVNVNTECQIAFA KATRKFVAEYEANEAEYDKKKLFDPRKFLKPGFEAITEAVEERIDVFGSANKA >gi|311101983|gb|AEKO01000002.1| GENE 73 52348 - 52704 467 118 aa, chain + ## HITS:1 COG:no KEGG:str1896 NR:ns ## KEGG: str1896 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 117 1 117 118 137 89.0 9e-32 MNMFDNYIVPVFFGGGALALLGLVLFGWALPSFLKGKWSYLISLLGLGLVAFAYFDSAIV ITYKIWLGLIGVIMVGWGLPFNNRKGRRVMPIFWGIMAIVVGIAAIAFTIAYGVINRR >gi|311101983|gb|AEKO01000002.1| GENE 74 52737 - 53075 136 112 aa, chain + ## HITS:1 COG:no KEGG:str1895 NR:ns ## KEGG: str1895 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 112 1 112 112 129 86.0 3e-29 MFYFMTLSFIIMPALGCFLIGLAFAKSDRWDFSWSISLIGLAAFISSFWHIARVDLWFML SYSVGPFLMGFGFSWDLSKKRRRQLLLLGAFFLVFFVILYYLIVRILNTAVV >gi|311101983|gb|AEKO01000002.1| GENE 75 53091 - 53651 765 186 aa, chain + ## HITS:1 COG:SP0663 KEGG:ns NR:ns ## COG: SP0663 COG4475 # Protein_GI_number: 15900564 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 5 185 6 186 187 234 69.0 5e-62 MLLDLEEKTRVLVEDIVERSAIGRGAIFVLGLSSSEVAGGTIGKASSREIGQRIVKTILE VLEPKGIYLAVQGCEHLNRALVVERELAMAKDLEIVNVLPTLHAGGSGQLAAFDYMKDPV EVEEIVAQAGIDIGDTSIGMHVKRVQVPLRPITPELGGAHVTALASRPKLIGGARAEYLA DPIRKN >gi|311101983|gb|AEKO01000002.1| GENE 76 53705 - 54415 560 236 aa, chain - ## HITS:1 COG:SP1885 KEGG:ns NR:ns ## COG: SP1885 COG2188 # Protein_GI_number: 15901713 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 234 1 234 236 280 64.0 1e-75 MKKYQIIYKDLEKAIHEQKYQVGDFLPTEQELVQSYQVSRDTIRKALTLLVEEGLVKKIH GSGSQVINQEQINFPVSDLTSYQELIEQQGLNSQTNVISLDKIIVDSKLSERTGFSNSRQ VWRVVRQRVVDSCASVIDIDYLDASLVPQLNRSIAEYSIYDYIENQLNLSISHAFKEITI DNAIDQDKILIDLGKDQHVVCVRSKVYLNNGKQFQFTESRHKLEKFKFVDYAKRHH >gi|311101983|gb|AEKO01000002.1| GENE 77 54572 - 56551 2444 659 aa, chain + ## HITS:1 COG:SP1884_2 KEGG:ns NR:ns ## COG: SP1884_2 COG1263 # Protein_GI_number: 15901712 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pneumoniae TIGR4 # 92 474 1 383 383 689 91.0 0 MGKFEQEAKDLLAAIGGKENVTAVTHCATRMRFVLGDDKKADVKTIEVIPAVKGTFTNAG QFQVIIGNDVPIFYNDFTAVSGIEGVSKEAAKSAAKSNQNPVQRVMTTLAEIFTPLIPAL IVGGLLLGFRNVLEGVHWSMLDGKTITEVSQFWSGVNHFLWLPGEAIFQFLPVGITWSVS RKMGTSQILGIVLGICLVSPQLLNAYSVASTPASEIAKNWVWDFGFFTVNRIGYQAQVIP ALLAGLSLSYLEIFWRKHVPEVVSMIFVPFLSLIPALILAHTVLGPIGWTIGQALSTVVL AGLTGPLKWLFGAVFGALYAPFVITGLHHMTNAIDTQLIADAGGTALWPMIALSNIAQGS AVFAYYIMHRHDEREAQISLPATISAYLGVTEPALFGVNVKYIYPFVAGMIGSSIAGLLS VTFNVTAASIGIGGLPGILSIQPKYMIPFAGMMLVAIIVPMVLTFFFRKADLFTKTEDDT ELKEEFAAQEEAEFASHSATPAVIAESAEVVSPLAGQVKPLSQATDPVFSSGVMGQGVVI EPSQVELVSPVNGTVTVLFPTKHAVGIVSEEGVEMLMHIGMDTVSLDGKGFESHIKQGDK VVVGQQLISFDMDVIKEAGLVTETPVIITNQDDFQADVEGNLPRDIKRGDVLMIAHRTK >gi|311101983|gb|AEKO01000002.1| GENE 78 56615 - 58240 1493 541 aa, chain + ## HITS:1 COG:SP1883 KEGG:ns NR:ns ## COG: SP1883 COG0366 # Protein_GI_number: 15901711 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 1 540 1 540 541 981 86.0 0 MALDKTKVVYQIYPKSYKNTTGNGIGDFRGIIEKIPYLAELGVDMVWLNPFYPSPQRDNG YDISDYTAVNPVFGDMADFEEMVRVAKEHKIDFMLDMVLNHCSTEHEWFQKALAGDKYYQ DFFFIQDQPTDWLSKFGGSAWAPFGDTGKYYLHLFDETQADLNWRNPNVRKELFKVVNFW LDKGVKGFRFDVINLIGKDEVLVDCPENEGKPAYTDKPIVHDYLHMMNEATFGSDDSFMT VGEMSSTTIDNCVLYSAPERHELSMAFNFHHLKVDYEDGQKWTIAPFDFEELKRLHHTWG KEMSDRGGWSALFWNNHDQPRALNRFVDIKNFRNEGATMLAASIHLSRGTPYIYMGEEIG MIDPDYDSMADYVDVESINAYQMLLDQGKSPEQAFKIIQAKSRDNSRTPMQWDASENAGF STGTPWLKAGKSYKDINVENEINGPIFKFYKELIRLRKEMAIISEGSYQPAFEDSKKVYA FERHLDGQKLLVLNNFYESEAEVAIPAEYQSGRVLLSNYDDAELAEKVVLKPYQTLAILV K >gi|311101983|gb|AEKO01000002.1| GENE 79 58322 - 60217 1929 631 aa, chain + ## HITS:1 COG:SPy2095 KEGG:ns NR:ns ## COG: SPy2095 COG3590 # Protein_GI_number: 15675851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Streptococcus pyogenes M1 GAS # 1 631 1 631 631 1010 78.0 0 MTRLQDDFYHAINGEWEKTAVIPDDKPRTGGFSDLADEIEDLMLETTDQWLTGENVPDNA VLQNFIKFHRMATDFDKREAVGIEPVKPLIEEYKQLSSFSEFASKIAEYEMAVKPNAFPF GVSPDFMNAQLNVLWAEAPRIILPDTTYYTEDNEKGKELLGIWREMQEELLEKYGFTAEE IKDILDKVIALDAKLAKYVLSSEESSEYVELYHPYDWADFTKLAPELPLDNIFTKILGQV PDKIIVPEERFWTEFAAEYYSEANWELLKADLLIDAATSWNAYLTDELRILAGKYGRALS GTPQAMEKKKAAFYLAQGPYNQALGLWYAGEKFSPEAKADVEAKVATMIDVYKLRLQKAD WLAPETREKAITKLNVITPHIGYPEKLPETYDKKIIDENLSLVENAQKLVEISVAHSWSK WNQPVDRSEWHMPAHMVNAYYDPQQNQIVFPAAILQAPFYDIAQSSSANYGGIGAVIAHE ISHAFDTNGASFDENGSLKNWWTEEDYEAFKERTDKIVDQFDGLDSYGAKVNGKLTVSEN VADLGGVACALEAAKRDEDFSVREFFVNFATIWRMKAREEYMQMLASVDVHAPAKWRTNV IVSNFDEFHKEFDVKEGDGMWRAPEDRVIIW >gi|311101983|gb|AEKO01000002.1| GENE 80 60360 - 62948 2806 862 aa, chain + ## HITS:1 COG:SA0143_2 KEGG:ns NR:ns ## COG: SA0143_2 COG1454 # Protein_GI_number: 15925852 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Staphylococcus aureus N315 # 451 861 1 410 411 589 69.0 1e-168 MTKQTKDVQTIIDKLATKGVEALDAMSNFTQEQVDHIVHQAAIAALDKHMYLAKLAVDET GRGIYEDKAIKNMYASEYIWNSIKYDRTVGVIAEDKEQGLVSIAEPVGVICGVTPTTNPT STTIFKALIALKTRNSIVFAFHPSAQKSSAEAARIVRDAAIEAGAPKDCIQWIEEPSIEA TGLLMNHPKIATVLATGGPGMVKAAYSTGKPALGVGAGNVPSYIAADAKVKRAVNDIIVS KTFDNGMICASEQAAIVDAAIYDEVKAEFEAHQCVIISKKADIAKLEKVVLNEARTAVNG AIVGHSAMEIAEKAGLKVPAGTKMLLAEIPDAIMEHPLALEKLSPVLALIKSDGVEDGFK KAEGMLNLGGLGHTAVIHTENEELQLQYGIRMKACRVLVNSPSAEGGIGNIYNNMIPSLT LGCGSYGHNSVSHNVSSFDLLNVKTLSKRRNNMQWFRVPPKIFFEKDSITYLRHIEADRV MLVCDPGMVQFGYADLVKRQLELNRHKPAVDVFSDVEPNPSTNTVYKGLERFVDFQPDVI IALGGGSAMDAAKAMWMFFEHPDVSFFGAKQKFLDIRKRTYKIPYAQKTTFICIPTTSGT GSEVTSFAVITDSETHIKYPLADYALTPDIAIVDPALVMSVPASVTADTGMDVLTHAIES YVSVMASDYTRGLSLQAIKLVFENLEHSYRFGDEESREKMHNASTMAGMAFANAFLGINH SLAHKVGPMFDIPHGRTNAILMPHVIRYNGRDPQKHAMFPKYDYFRADKDYADIARFMGW GTDKQSDAELVEVLAQKVYELGIAVGIDMNWKGQGVTKKLLQDTVYTLAEHAYEDQCTTA NPKEPLISELKEIIEVAFDYKG >gi|311101983|gb|AEKO01000002.1| GENE 81 63090 - 63299 72 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVTVYFNPGQKLKESRYPVTSKNIAVRVNQKMSLFQLRMTPKINFKRKSGIEIPDFFWYL NEIKQVKSE >gi|311101983|gb|AEKO01000002.1| GENE 82 63386 - 64870 1873 494 aa, chain + ## HITS:1 COG:SP2066 KEGG:ns NR:ns ## COG: SP2066 COG0498 # Protein_GI_number: 15901885 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 494 1 494 494 748 80.0 0 MTLVYQSTRDENNKVTASQAILQGLATDGGLFTPLTTPEVTLEFDRLKDASYQEVAKLVL SAFLDDFTEEELDYCITNAYDDKFDTAAIAPVVKLQNHYNLELFHGSTIAFKDMALSILP YLLTTSAKKQGVDNKIVILTATSGDTGKAAMAGFADVPGTEIIVFYPKDGVSKIQELQMT TQTGANTHVIAIDGNFDDAQTDVKRMFNDVDLREKLLAHHTQFSSANSMNVGRLVPQVVY YVYAYAQLVKAGHIQNGDKVNFTVPTGNFGNILAAYYARQIGVPVGKLICASNENNVLTD FFATGTYDKKRDFKVTTSPSMDILVSSNLERLIFHLLGNDATKTKELMDALVTKGEYTLA DADKEILDLFAAGFATEDETAAEIKRVYDEDKYIEDPHTAVASAVYEAYVQKTDDHTPTV IASTASPYKFPRVAVSAVTGKDSGDDFKAVEDLHQLSGVAIPAAVDGLEHAEVRHKTVVA AADMQKAVESYLGV >gi|311101983|gb|AEKO01000002.1| GENE 83 64931 - 66217 1267 428 aa, chain + ## HITS:1 COG:SP2065 KEGG:ns NR:ns ## COG: SP2065 COG0534 # Protein_GI_number: 15901884 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 15 423 1 407 411 378 55.0 1e-104 MTETKKILNIALPAMAENLLQMLMGVVDSYLVAQVGIVAISGVSVANNIITIYQAIFIAL GASSASVIARSLGKGDVKATNRDTWDAIIITLALSIVLGLLSIFVGGSILNLLGTEQSVT QAGSLYLALVGGGVVFLALMTTFGNILRAKGRPRISMVVSLLTNLLNALLSSLAIFVGHW GIIGVATATVCSRLVGTAILWTAMKLDVKQFEVTKPFNKELLGIALPAAGERLMMRAGDV VIVAIIVTFGTAVVGGNAIGENLTQFNYMPGMGVATATVILVANSLGRGDKAQMKRIIRE SYWISTFLMVLVSGSILFFGQGLSSFFTDNKAAIAASQVVILYSFLGNPVTSATLVYTAV WQGLGKAKIPFYATTIGMWLIRIFSGYFLGVSLGMGLAGVWIATVVDNVWRAVFLYVMYR RYLIKRKF >gi|311101983|gb|AEKO01000002.1| GENE 84 66329 - 66694 451 121 aa, chain + ## HITS:1 COG:SPy1886 KEGG:ns NR:ns ## COG: SPy1886 COG1302 # Protein_GI_number: 15675703 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 121 1 121 121 171 90.0 4e-43 MTVKINTKDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIRDNFQALLGKENYAKGVV VKSTDAGITVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGIKTETVNVYVQNIKVVGE N >gi|311101983|gb|AEKO01000002.1| GENE 85 66727 - 68361 1715 544 aa, chain + ## HITS:1 COG:SPy1885 KEGG:ns NR:ns ## COG: SPy1885 COG1461 # Protein_GI_number: 15675702 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Streptococcus pyogenes M1 GAS # 1 544 12 554 554 822 82.0 0 MVQAAATRLGKQAEYVNSLNVFPVPDGDTGTNMGMTMDNGAKAVADQTASTVGEVGQILS KGLLMGARGNSGVITSQLFRGFGQSIKDKTELDGQDLAHAFQSGVEVAYKAVMKPVEGTI LTVSRGAASAAVKKSESTNDAVEVMRAALDGAKAALAKTPEMLPVLKEVGVVDSGGQGLV FIYEGFLSALTGEYIASEDFQATPATMTEMINAEHHKSVAGHVATEDITFGYCTEIMVGL KQGPTYVKDFDYEEFQNYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGALVKV KVDNMRNQHDAQVQKAEAIQTAPSTPKDFALIAVVAGDGLADIFKSQGVDYVISGGQTMN PSTEDIVKAIEQVNAKNVIILPNNKNIFMAAQSAAEVVDVNAAVVETRTVPQGFTSLLAF DPSQSIEANVEAMTVSLSDVTSGSVTLAVRDTTIDGLEIHENDILGMVDGKILVSTPDMD QALLDTFDKMIDEDSEIVMIYVGEEGNQEQAQALAEKLEEAHEDIEVEIFQGDQPVYPYL FSVE >gi|311101983|gb|AEKO01000002.1| GENE 86 68363 - 69661 476 432 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 410 1 414 422 485 62.0 1e-137 MRLIKNTTELIGIKDQNIKISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKPSK IPLLEQAGTPTLLHLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAIMSWDEFGFKKGELAFVAQNYETNKLIT ILDNRRQTTIRNYFLKYPLKVRRKVQFITMDMSGAYIPLAHRLFPNAKIVLDRFHIIQHL GRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLNFSEELANYYNLYQLLLFHFQEKRVDEFFELIEENMSKVNHYFQTVFRTFIRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKRRPIRSSLDVSF SSPTTVDKEPYF >gi|311101983|gb|AEKO01000002.1| GENE 87 69949 - 71766 2250 605 aa, chain + ## HITS:1 COG:SA1858 KEGG:ns NR:ns ## COG: SA1858 COG0129 # Protein_GI_number: 15927628 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Staphylococcus aureus N315 # 1 560 1 561 562 868 76.0 0 MRSDMIKVGVDKAPARGLLYATGQVKSSKDMQKPFIAICNSYIDIVPGHVHLRELADIAK EAIREAGGIPFEFNTIGVDDGIAMGHIGMRYSLPSRELIADAAETVINAHWFDGVFYIPN CDKITPGMILAAMRTNVPAVFCSGGPMKGGVDMTGHQATLSSLFEAVGTYQAGDMSKEEL DYLEKNACPTCGSCSGMFTANSMNCLMEVLGLALPGNGTILAVSDERRELVRQAATKLMD NIKNNVRPRDIVTKEAIDDAFALDMAMGGSTNTVLHTLAIAREAGIDYDLKDINEIAKKT PYLSKIAPSSIYTMHDVHEAGGVPAIINQLIKKGAIKGDRITVTGKTLKENVAGAEIKNE EIIHPIEQPISPVGGLSILYGNIAQDGAVIKVGGVDPSVKTFRGKAICCDSQAQALELID NGTVKKGHVVVIRYEGPQGGPGMPEMLAPTSKIVGRGLGKDVALITDGRFSGATRGIAIG HVSPEAAEGGNIALIEDGDEIVIDLPNRTIDLLVDDATLEARRKHLKPFKSKISSGWLRR YTAFAKSANVGGTLMSDEEFEERKAERQAQEKTKNIISEEFVIFFSETLANLVKNVIIVY KVLNF >gi|311101983|gb|AEKO01000002.1| GENE 88 71803 - 73503 1835 566 aa, chain + ## HITS:1 COG:SP0445 KEGG:ns NR:ns ## COG: SP0445 COG0028 # Protein_GI_number: 15900362 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Streptococcus pneumoniae TIGR4 # 1 566 1 566 566 997 86.0 0 MEKIELEEARSGADLILDTLLELGISTIFGYPGGAVLPLYDAIYKNEDINHILSRHEQGS LHEAEGYAKSTGKLGVALVTSGPGATNAITGIADAMSDSVPLLVFTGQVATSGIGKDAFQ EADIVGITMPITKYNYQIRDTADIPRIIREAVHIATTGRPGPVVIDLPKDVVAKETAFIN DTEINLPSYQPTLRPNEMQIKKILKQLGKAKKPVIVAGGGVSYSESAKELVAFAERYQIP VVTSLLGQGTIATSHPLFLGMGGMHGSYAANIAMTDADFMIAIGCRFDDRLTGNPKTFAK NAKVVHIDVDPAEIGKIIAVDLPVVGDAKQALEMLLAEPVVQNNTEKWIEKVTKDKERVR SYDKKERMVQPQSVIERIGELTKGDAVVVTDVGQHQMWTAQYYPYQNERQLVTSGGLGTM GFGVPAAIGAKIANPDKEVILFVGDGGFQMTNQELAILNIYKVPIKVVMLNNHSLGMVRQ WQESFYEGRTSESVFDTLPDFQLMAQAYGIKSYKFDNPETIDQDLEVIKEDVPMFIEVDI SRKEHVLPIVPAGKSNHEMLGVKFNA >gi|311101983|gb|AEKO01000002.1| GENE 89 73496 - 73972 557 158 aa, chain + ## HITS:1 COG:SP0446 KEGG:ns NR:ns ## COG: SP0446 COG0440 # Protein_GI_number: 15900363 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 158 1 158 158 243 93.0 1e-64 MRRMLTAKLQNRSGVLNRFTGVLSRRQVNIESISVGASEDPNVSRITIIIDVNSQNEVEQ IIKQLNRQIDVIRIRDITDQPHLEREVILVKVSAPTSKRAEILAIIQPFRASVVDVAPSS ITIQMTGDAEKSEALLRVIRPYGIKNIARTGATGFTRD >gi|311101983|gb|AEKO01000002.1| GENE 90 74047 - 75069 1435 340 aa, chain + ## HITS:1 COG:SP0447 KEGG:ns NR:ns ## COG: SP0447 COG0059 # Protein_GI_number: 15900364 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Streptococcus pneumoniae TIGR4 # 5 340 1 336 336 554 86.0 1e-158 MAVQMEYEKDVKVAALDGKKIAVIGYGSQGHAHAQNLRDSGHDVIIGVRPGKSFDKAKED GFDTYTVAEATKLADIIMVLAPDEIQKDIYKDEIEPNLSAGKALGFAHGFNIHFEFIKVP KDVDVFMVAPKGPGHLVRRTYTEGFGVPALYAVYQDATGNAKDIAMDWAKGIGSARVGLL VTTFKEETEEDLFGEQAVLMGGLTHLIEAGFEVLTEAGYAPQLAYFEVLHEMKLIVDLIY EGGFKKMRQSCSNTAEFGDFVTGPRVIGPEVKENMKAALADIQSGKFAREFVEDHDAGFP RLKAYRKEAEELEIEKIGAELRKAMPFVGQNDDDAFKIYN >gi|311101983|gb|AEKO01000002.1| GENE 91 75192 - 76448 692 418 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 10 413 16 411 418 271 38 2e-71 MTIFEELKARGLIFQTTDEEALVKAFEEGPVSYYTGYDPTADSLHLGHLVAILTSRRLQL AGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVM VNNYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRIETGISYTEFAYQIMQGYDFYEL NDKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWL DATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLARE VVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADENLNIVELLVN AKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLTY >gi|311101983|gb|AEKO01000002.1| GENE 92 76550 - 78973 2201 807 aa, chain + ## HITS:1 COG:SPy0097 KEGG:ns NR:ns ## COG: SPy0097 COG0744 # Protein_GI_number: 15674320 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 43 802 7 764 770 944 61.0 0 MNFEKIINYFRRLGQTIRTKFASSRSKRGDKSFKERKATTGSKWNRKQARKSPEDGMTLL DMGDVFLKTLKLLSDFFYVVIIVLTLFGAGIGLGYLGSQIESVPSIKDKTLLNQISEVSV VSSMSYSDSKKIADIDTDLLRTPIESDEISNNVKNAIIATEDENFKKHKGVVPKAVFRAL VSSVLGVGSSSGGSTLTQQLIKQQVTGDAPTFKRKAAEIIYALQLERRASKNEILTDYLN VSPFGRNNKGKNIAGIEEAAQGIFGVSAADLTVPQAAYLAGLPQSPIVYSPYTADGQLKN AEDLSYGLARQQDVLYNLYRGGYLDKSQYESYKDYDITKDFKAGEKSDAVSHDYLYYSVM SEAQDVMYDYLVKRDKVSSQDLKNDKTKESYREMALKELQTGGYSVKTTIDNAVYHAMQD TANQYGGLLDQGGNNGVEVGNVLMDNATGAILGFVGGRSYENNQNNHAFDTARSPGSSIK PIIAYGIAIDQGLMGSSSILSNYPTNFTGGTPILHDGDKGTAMMNLQEALNTSWNIPAFW TYQMLQRHDVDVEGYMTKMGYKIANYNIESLPLGGGIETTVAQQVNAYQMLSNGGVYEKG HMIDSITDRTGEVIYQHKSEGIQVFSRATASIMDNLLKEVVVKGATTQFHSELKNVNGAA ASADWMGKTGTTDNFADAWLIVSTPGITLGGWAGYDDNAPTNSKTGYTYNAQYMARLTSA IYNANPGIFKTGDKFNIDSSAIKASVLKSTGLKPATVSVNGRNVSVSGEMVDTYWAKNGP GDTTYKFAIGGTDSDYQKAWSSILEGH >gi|311101983|gb|AEKO01000002.1| GENE 93 79333 - 82914 3962 1193 aa, chain + ## HITS:1 COG:SPy0098 KEGG:ns NR:ns ## COG: SPy0098 COG0085 # Protein_GI_number: 15674321 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Streptococcus pyogenes M1 GAS # 1 1187 1 1187 1188 2236 94.0 0 MAGHDVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKEFLDTGLKEVFEDVLPISNFTD TMELEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGDSELVRNTVEKDIHKNPADSRTDEALKE IYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKVNKKLNIKTRLLGQTIAENLV DPETGEILVEAGTEMTRDVIDSIAEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVAPND PDRVVTIVGNANPDDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRIRAVGELL ANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH LNKYGFIQTPYRKVDRATGKVTNEVVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH QGNNQEYPSHLVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP YVGTGMEYQAAHDSGAAVIAQHDGKVVYSDADKVEVRREDGSLDVYTIQKFRRSNSGTAY NQRTLVKVGDIVEKGDFIADGPSMEGGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKD DVYTSVHLEEFESETRDTKLGPEEITRELPNVGEEALKDLDEMGIIRIGAEVKEGDILVG KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTILYDGRTGE PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE AYGASNILQEILTYKSDDVNGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV LDEDDHEVELRDLDEGEDDDVMHVDDLEKARVQQAQEATELEKDKEEASDKTE >gi|311101983|gb|AEKO01000002.1| GENE 94 83042 - 86653 4015 1203 aa, chain + ## HITS:1 COG:SPy0099 KEGG:ns NR:ns ## COG: SPy0099 COG0086 # Protein_GI_number: 15674322 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Streptococcus pyogenes M1 GAS # 1 1202 10 1211 1213 2264 93.0 0 MQITLASPTKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIR YKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVI YFAAYVVIDPKETPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQNLLKQVDLEAEI AELKEELKTATGQKRVKAVRRLDVLDAFYKSGNKPEWMVLNILPVLPPDLRPMVQLDGGR FAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGP GSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPRLMAIELFKP FVMREIVAREYAGNVKAAKRMVERGDERIWDILEDVIKEHPVLLNRAPTLHRLGIQAFEP VLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLLLAAEHILNPKDGKPV VTPSQDMVLGNYYLTMEEEGREGEGMVFKDIDEAVMAYRNGYVHLHSRVGIAVDSMPDKP WKENQLHKILVTTVGKILFNSIIPAEIPYLQETTNENLTDSTPDKYFLEPGQDIQTVIDS LEINAPFKKKNLGNIIAETFKRLRTTETSAFLDRLKDLGYYHSTLAGLTVGIADIPVIDN KQEIIDAAHHRVEEINKAFRRGLMTEDDRYVAVTTTWREAKEALEKRLIETQDPKNPIVM MMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMT DTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETLEERLQGRYT KKSVKNPTTGEVIVGPDTLITEDMAAAIVNAGVEEVTIRSVFTCNTRHGVCRHCYGINLA TGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQEIFEARNPKG EAVITEVKGTVIEIEEDAATRTKKVFVQGKTGMGEYVVPFTARMKVEVGDEVHRGAALTE GSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRKVRVMDPGDT DLLPGTLMDISDFTDANKDIVISGGVPATSRPVLLGITKASLETNSFLSAASFQETTRVL TDAAIRGKKDHLLGLKENVIIGKTIPAGTGMARYRNIEPLSVNEVEVIENIAVDEAIVET SED >gi|311101983|gb|AEKO01000002.1| GENE 95 86983 - 88185 916 400 aa, chain + ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 190 383 1 194 196 275 71.0 2e-73 MRTVFGIDVSKASSEVAILVNGERVHSYTMPNDIIGFSHLLKDLKTVSNPEIIFEATGVY SRRLQAFLEENSYDYTRLNPLEAKKQLDSLRVRKTDKIDAEKLASSQFVLNRKPTYVQEE VYQNLHDLSRFYQNLTEDIVRTKNRLHKVLQVAFPEIENLLSTPTGEQYWNLVSIFPTKH WVLELSEVELKETIRNSTSKRISENRVGNLAEKLVGLAKQSYSAISKTSPMIEEVKYNAQ ELIRLTNRREQVLQQLIALAEPLPEYEILLSIPGIAETTATSIIGELGDIRRFKSANQIN AFIGIDLKHYESGDFLAQEHITKRGNPYARKIMYKCIHNIASASHTNPCHIADFYEKRKR QSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYTLAKSH >gi|311101983|gb|AEKO01000002.1| GENE 96 88442 - 88804 333 120 aa, chain + ## HITS:1 COG:SP2054 KEGG:ns NR:ns ## COG: SP2054 COG4699 # Protein_GI_number: 15901874 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 119 3 121 123 136 58.0 1e-32 MYQVVEMKGDLEPWWFLEGWQEDIISTKEFENFYDALKYYKKLWFAMEEILPSYISRSSV MTAFWDQEDKHWCEECDEYLQVYRSIALLDDYQEIPEEKHRPGYEKRNDLPSHAHCKIKR >gi|311101983|gb|AEKO01000002.1| GENE 97 89176 - 89466 356 96 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 3 91 59 147 157 129 61.0 2e-30 MPDHVHMLVSIPPRMSIASFMGYLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGL NEATIKKYIQEQEKHDIALDKLSVKEYENPFRDNGK >gi|311101983|gb|AEKO01000002.1| GENE 98 89649 - 91571 1763 640 aa, chain + ## HITS:1 COG:SP2053 KEGG:ns NR:ns ## COG: SP2053 COG2804 # Protein_GI_number: 15901873 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Streptococcus pneumoniae TIGR4 # 1 311 1 310 313 397 64.0 1e-110 MITEFAKEIIKNADSCGAQDIYVIPRQDNYELYMRVGQERRLIDVYRPDFMASLIGHFKF VAGMMVGEKRRSQLGSCDYDCGDGHLVSLRLSTVGDYRGLESLVIRVLHSERRELTYWNQ GIQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQERFKGQQVISIEDPVEIKQDNVLQLQ VNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTIHAKSVAGV YERLLDLGVDKSELDNALQGIAYMRLIKGGGVIDFASENFQSHSSTSWNQQLEGLVKQGY LTEGDIQGEKLKINQQVKVIQLFKQLLKAGFTLTEIVAFLERSHLLKESSLSLMKASLMR GDRLDKMFASVGFSDNIVTQIALADKHGNLLGSLTKIEAYMLRMTKVRKKLMEVATYPIL LLGFLILIMLGLKNYLLPQLLEGDGKENWAVQLVQIFPQLFFVTLCGLLVLSLILYLWVK RQPALVFYRRMAKIPFIGQTIRLYTTAYYAREWGNLLGQGIDLLDLVSLMQEQKSKLFRE LGADLEEALMLGQSFPDRIASHPFFTKELSLIIAYGEANARLGYELEVYAEEVWQAFFNR LNKATTFVQPLIFIIVAVVIVMIYAAMLLPMYQNMEGMMS >gi|311101983|gb|AEKO01000002.1| GENE 99 91627 - 91893 234 88 aa, chain + ## HITS:1 COG:SPy0103 KEGG:ns NR:ns ## COG: SPy0103 COG4537 # Protein_GI_number: 15674326 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGC # Organism: Streptococcus pyogenes M1 GAS # 1 88 21 108 108 96 59.0 1e-20 MLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVS EGQITQKQADSYNDYYAKHGGESRSVAN >gi|311101983|gb|AEKO01000002.1| GENE 100 91844 - 92281 219 145 aa, chain + ## HITS:1 COG:SP2050 KEGG:ns NR:ns ## COG: SP2050 COG2165 # Protein_GI_number: 15901870 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Streptococcus pneumoniae TIGR4 # 16 142 2 128 134 107 44.0 9e-24 MIIMRNMVAKAAQWPIRAFTLLESLVTLAVVAFLTLSLSGSVTGIFQQVETNLFYLRFEY LYRDSQRLAAAKGANVELQLTKDKISNGKSSLVIPKNIHLDKGQTLVFNAKGGNSSLTKI RFSSDKEVVTYQLNMGSGKYKKTVS >gi|311101983|gb|AEKO01000002.1| GENE 101 92313 - 92543 251 76 aa, chain + ## HITS:1 COG:no KEGG:str1861 NR:ns ## KEGG: str1861 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 76 21 96 97 101 89.0 1e-20 MAVLVLVSGLILDQINTNRRIMARNLHQQEVLSVATMAVQTKQDQLTLNGITVTVKRSKQ GITVYESGKEITHVSK >gi|311101983|gb|AEKO01000002.1| GENE 102 92530 - 92967 296 145 aa, chain + ## HITS:1 COG:SP2048 KEGG:ns NR:ns ## COG: SP2048 COG4940 # Protein_GI_number: 15901868 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Competence protein ComGF # Organism: Streptococcus pneumoniae TIGR4 # 2 143 9 150 153 140 50.0 8e-34 MSLNSKVRAFTLLECLVALLVIAGSVQVYQGLTTVLVGNVKQVRQQENQDWLLFVQQMEA ELEGCQLVKVEGNKLYVKQDNQDLAFGLSSATDFRKTNADGRGYQPMLFDVKSSTVSQKN QIVTIQVTLKNGLQRSFIYAFEKTG >gi|311101983|gb|AEKO01000002.1| GENE 103 92945 - 93262 303 105 aa, chain + ## HITS:1 COG:no KEGG:str1859 NR:ns ## KEGG: str1859 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 105 1 105 105 154 95.0 7e-37 MLLKKQVRGGVLLYALFMAGIFTLLLHVYLERVVASSRQNQAQIVTSQSRLMAEMTMDLV DKEAGAFSFSQGTTTYEVKDKQVIVRVVSKGQIKTYRYVKKQEQK >gi|311101983|gb|AEKO01000002.1| GENE 104 93307 - 94263 1094 318 aa, chain + ## HITS:1 COG:SPy0108 KEGG:ns NR:ns ## COG: SPy0108 COG0827 # Protein_GI_number: 15674331 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Streptococcus pyogenes M1 GAS # 1 315 1 315 317 427 68.0 1e-119 MNFEAIETAFELLLENVQTIESDLGTHAYDALIEQNSYYLGAEVANEVIIKNNEKLRALD LSKEEWRRAFQFLFIKLGQLEALQANHQFTPDAIGFIILYLLEGLTKDDQLDVLEIGSGT GNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIADVVNSSAVYIQEDAVRPHILKESDVI ISDLPVGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAILLAPTNLLTSPQ SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTENAPETFVYPLSDLQNPEV LKDFTENFQKWKSDNSIF >gi|311101983|gb|AEKO01000002.1| GENE 105 94320 - 95513 1473 397 aa, chain + ## HITS:1 COG:SP2044 KEGG:ns NR:ns ## COG: SP2044 COG0282 # Protein_GI_number: 15901865 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 395 1 395 396 577 71.0 1e-164 MTKTIAINAGSSSLKWQLYEMPDEVILAKGLIERIGLKDSVSTVKFDDRSESQTLDIADH VQAVKILLDDLIRFDIIKSYDEITGVGHRVVAGGEYFKESSLVDEDALAKIEELSALAPL HNPGAASGIRAFKELLPDITSVAVFDTAFHTSMPEVAYRYPVPNRYYTDYQVRKYGAHGT SHQYVSQEAAKLLGKPIEETKIITAHVGNGVSITAVDGGKSVDTSMGLTPLGGVMMGTRT GDLDPAIIPFVIDREPEMADAERIRHVFNKESGLLGISEKSSDMRDIIAGKNAGDEKCAL AYNLYVDRLRKYIAQYFGVLNGADAIVFTAGIGENSAEVRASVLDGLTWFGIEVDPEKNV FGHVGDITTAESAVKVFVIPTDEELVIARDVERLKTK >gi|311101983|gb|AEKO01000002.1| GENE 106 95764 - 95961 252 65 aa, chain + ## HITS:1 COG:MJ0272 KEGG:ns NR:ns ## COG: MJ0272 COG1476 # Protein_GI_number: 15668446 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanococcus jannaschii # 1 65 14 78 79 68 50.0 2e-12 METKIQELRKANKISQAELADEMGVTRQTIISLEKGRYNASLELAFKIARYFGKTIEEVF IFEED >gi|311101983|gb|AEKO01000002.1| GENE 107 95975 - 96418 468 147 aa, chain + ## HITS:1 COG:no KEGG:STER_1830 NR:ns ## KEGG: STER_1830 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 146 1 146 147 202 89.0 4e-51 MLLKTLGKKKAESEYKRYIARVSCSFFSLGILGLFIVCSNSLSDYALGLVVGVTIGSYAL SIYYFAALSHPKRLHQMYIAAYDERNKQILQVTAVATLILEFLLIFALIALYAFVSIQLP YVTVLSVLLYGLVVGFVFIRLILSKIG >gi|311101983|gb|AEKO01000002.1| GENE 108 96519 - 97181 370 220 aa, chain + ## HITS:1 COG:SP0288 KEGG:ns NR:ns ## COG: SP0288 COG1266 # Protein_GI_number: 15900222 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 4 216 3 223 230 73 27.0 2e-13 MNKESILKRFLYFLLAFLILCIEQAPTIFVRVKDVRAVSLLILVMLLISTGALFLGKRMG LLEGFKTLSSLKAWGMIGLTYLGIYIVTRVGGMVMQMEGVSNSANQAAIENAHMNPFVLI TVTVIMAPIVEELIFRGLLMGRVFNPDSIVGLTLSSLLFGLVHMPNSIGVWIIYAGMGFT LGVVYRKCQKLEYCIIAHMINNSIVVSMMLLLQFLAPYIK >gi|311101983|gb|AEKO01000002.1| GENE 109 97207 - 97977 964 256 aa, chain - ## HITS:1 COG:SPy0112 KEGG:ns NR:ns ## COG: SPy0112 COG0345 # Protein_GI_number: 15674334 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 256 1 256 256 306 66.0 3e-83 MIIGFIGVGKMATAIINGLNTSSHRIIISGSSLARSRQIAEELEVEAATSHQELLDNADL VILGIKPQMFDKVLTGLKFHQPIMSMAAGVTLERLASLTSADLPLIRIMPNLNAQILKST TGLCTNDKVSEDLLAIAKEITDSFGTTVELAEKDFDTFTALAGSSPAYIALFIEALAKAG VKNGLSKQIALTIATQTVLATAENLSLGSDSPHDLIDKVCSPGGTTIAGLMDLERTGLTH SVASSIDTTIAKAKKL >gi|311101983|gb|AEKO01000002.1| GENE 110 97993 - 99060 1212 355 aa, chain - ## HITS:1 COG:SPy0115 KEGG:ns NR:ns ## COG: SPy0115 COG1363 # Protein_GI_number: 15674335 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 355 1 355 355 593 77.0 1e-169 MTTLFDKIKEVTELSATSGFEAPVRDYLRNNITPLVDEVQTDGLGGIFGIKHSRAENTPK VLVAAHMDEVGFMIKEIKADGTFRVVELGGWNPLVVSSQRFTLHTRDGRIYPVISGSVPP HFLRASGGAPSLPSVSDIVFDAGFANQEEANAYGVFPGDVIIPESETILTANQKNVISKA WDNRYGVLMIRELLENVKDQELNNTLIAGANVQEEVGLRGAHVSTTKFDPEVFFAVDCSP AGDIYGNQGKVGDGTLIRFFDPGHIMLPNMKDFLLTTAEEAGIKYQYYCAAGGTDAGAAH LQNAGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQAIVKKLDRSTVDLIKNY >gi|311101983|gb|AEKO01000002.1| GENE 111 99160 - 99444 337 94 aa, chain + ## HITS:1 COG:no KEGG:stu1850 NR:ns ## KEGG: stu1850 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 94 4 97 97 164 94.0 8e-40 MKRKTLALFAGGVGALGLLAMAEKYRQSRAEMKKAALIQDIRQELSHLGTIAVLYTNPTD KENPGLTGGIVLEDGRAYSFVYAEDILTYEEEQA >gi|311101983|gb|AEKO01000002.1| GENE 112 99441 - 99755 433 104 aa, chain + ## HITS:1 COG:L195348 KEGG:ns NR:ns ## COG: L195348 COG0526 # Protein_GI_number: 15672371 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Lactococcus lactis # 1 103 1 103 105 132 62.0 1e-31 MIIPKNLEELASYVESDQKVVFFFTADWCPDCQFIYPVMPEIEALHPDMTFVRVNRDDYM ALAQTWNIFGIPSFVVTQKGRELGRLVNKARKTKEEITAFLATV >gi|311101983|gb|AEKO01000002.1| GENE 113 99765 - 100388 603 207 aa, chain + ## HITS:1 COG:SP1910 KEGG:ns NR:ns ## COG: SP1910 COG0073 # Protein_GI_number: 15901735 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Streptococcus pneumoniae TIGR4 # 1 205 1 206 208 286 69.0 1e-77 MIFAYNKEQVGDVLLVILEDTKDVKRSVERKGKVARVTADETGKTLAWNIFEASSLIDIK GNGQVFLSDQDVAVLNEELAKEGFEERLENTQGPVFVVGQIEEMVPHPDSDHLNICQVNI GDKKVQIVAGAPNAALGLKTIVALPGAMMPSGALIFPGKLRGEDSYGMMCSPRELALPNA PQKRGIIELDDSAVVGETFDPAKHWKG >gi|311101983|gb|AEKO01000002.1| GENE 114 100526 - 101557 1027 343 aa, chain + ## HITS:1 COG:SA1850 KEGG:ns NR:ns ## COG: SA1850 COG2391 # Protein_GI_number: 15927620 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Staphylococcus aureus N315 # 5 342 4 343 359 364 56.0 1e-100 MLTTVLSGGLIGLIFGFILQRTRFCLTGGFRDMYIARNNTLFYAFLIAITVESIGVLSLI KLGIVGNPYEDFSVLGAIVGSYLFGIGIVLAGGCATGTWYRAGEGLLGSWVALFFYMISA AAMKSGFLVPLNQLIAKRWVINDDLAGQLGIPVWYFLVLLVAITSFVVIRELRKPRRQIA TLPSKYKGVRHYLFEKTYHKYFAGLLIGLVALIAWPASQLTGRVGGLGITTPSAHLISYI ITGDSKQLGWGVFLVLGIFLGSFLAAKVSLEFRWRLPDLSTIGKSTLGGIFMGIGASWAG GCTIGNGLTATAIFSSKGWIALPVTILGVWTASYIIFVKPNKN >gi|311101983|gb|AEKO01000002.1| GENE 115 102003 - 102395 533 130 aa, chain + ## HITS:1 COG:L0299 KEGG:ns NR:ns ## COG: L0299 COG0629 # Protein_GI_number: 15672374 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Lactococcus lactis # 3 130 2 129 129 144 61.0 5e-35 MYNKVILIGRLTATPEIVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAET LASYASKGSLISLDGEIRTRKYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLA DLILEEELPF >gi|311101983|gb|AEKO01000002.1| GENE 116 103094 - 103612 641 172 aa, chain + ## HITS:1 COG:SP0020 KEGG:ns NR:ns ## COG: SP0020 COG0590 # Protein_GI_number: 15899968 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Streptococcus pneumoniae TIGR4 # 4 156 3 155 155 231 74.0 7e-61 MLDYSQEEKEFFMSEALKEAQKSLDKAEIPIGCVIVKDREIVGRGHNAREELNQAIMHAE VMAIQEANRTVGNWRLLDCTLFVTIEPCVMCSGAIGLARIPKVIYGACNQKFGGAGSLYD ILRDERLNHRVEVETGVMEEECAKIMQDFFRQSRERKKEAKRLAKLEVVQDM >gi|311101983|gb|AEKO01000002.1| GENE 117 103693 - 103956 257 87 aa, chain - ## HITS:1 COG:no KEGG:STER_1818 NR:ns ## KEGG: STER_1818 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 87 1 87 87 118 91.0 7e-26 MKFTKNQTNDTTANQSPKMNNYLLVKIALAGIISSLFLILLINLIFHVRLGTPIIDTNLK SAFGTLILFMPIFLLTREQEKHKTREE >gi|311101983|gb|AEKO01000002.1| GENE 118 104009 - 104146 61 45 aa, chain - ## HITS:1 COG:no KEGG:str1843 NR:ns ## KEGG: str1843 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 45 11 55 55 75 86.0 7e-13 MTTQELEIVSGGTVPWVAISVGIVGSKLTYDLSYAAGKSFYNHAH >gi|311101983|gb|AEKO01000002.1| GENE 119 104194 - 104358 243 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477975|ref|ZP_04062586.1| ## NR: gi|228477975|ref|ZP_04062586.1| hypothetical protein STRSA0001_0547 [Streptococcus salivarius SK126] # 1 54 1 52 52 75 83.0 1e-12 MINKEMKAAELASVTGGGWKTNLAVGVGGLCLASGPIGTLICIGSYNGYMDTAR >gi|311101983|gb|AEKO01000002.1| GENE 120 104714 - 105553 811 279 aa, chain + ## HITS:1 COG:SP2103 KEGG:ns NR:ns ## COG: SP2103 COG0500 # Protein_GI_number: 15901918 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 14 272 18 280 282 249 45.0 3e-66 MAKFSVFKDQESLFACPICQAPMHLDLSSLVCQNRHTFNIAKQGFVNFLRQTKGDKHYDM ASFEKRSQILAAGYYDSILEVISERLRDLPGHSHVLDVACGEGYYSRQLAQEFDKDFMAF DLSKDSILLAARQNPQKNVAWFVGDLAQLPLRENSIDVILDIFSPANYQEFGRLLSDHGL IFKVIPHEDHLKEFRQLLPEAQAYSNQDVLEHFQESCDLLERVTIAKTWSMPSEHVQTFA EMTPLFFHANKETLDLTSVTQLTVAGELLIGRIRDDKQS >gi|311101983|gb|AEKO01000002.1| GENE 121 105667 - 106419 555 250 aa, chain + ## HITS:1 COG:MA3051 KEGG:ns NR:ns ## COG: MA3051 COG1011 # Protein_GI_number: 20091869 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanosarcina acetivorans str.C2A # 7 216 8 208 217 81 30.0 1e-15 MKSRAYKNYIFDFYGTLVDILTDEKDPVLWDKLGQLYQAYGAAYEGDVLKKAYAKRVDQA RKELMELKGVAYPEIDLAHIFNQLYVDARPQSSNSNQPDDWGNLIAMVFRVLSRKHLTAY PHTKEVLAFLKEQGCRIYLLSNAQAAFTNAEIDLMALRPYFDAIYLSSDAGICKPQPEFL KQVLDDHGLNPSETVMVGNDLTTDIAVAEAVGIDGILLNTFPYSRRELENSPIKSDLVIT DIEALKTNFT >gi|311101983|gb|AEKO01000002.1| GENE 122 106505 - 107203 1043 232 aa, chain + ## HITS:1 COG:SP2097 KEGG:ns NR:ns ## COG: SP2097 COG2171 # Protein_GI_number: 15901912 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 232 1 232 232 336 86.0 2e-92 MTAQKMSAQEIIAFIGNAEKKTNVKVTFEGELATAVPASVTKLGNVLFGDWKDIEPLLAN LTENKDYVVEQDGRNSAVPLLDKRHLNARIEPGAIIRDQVTIEDNAVVMMGAVINIGAEI GAGTMIDMGAILGGRATVGKNSHIGAGAVLAGVIEPASADPVRIGDNVLVGANAVVIEGV QVGNGSVVAAGAIVTQDVPENVVVAGVPARIIKEIDEKTQQKTALEDALRNL >gi|311101983|gb|AEKO01000002.1| GENE 123 107281 - 108414 1214 377 aa, chain + ## HITS:1 COG:SP2096 KEGG:ns NR:ns ## COG: SP2096 COG1473 # Protein_GI_number: 15901911 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 3 375 2 374 376 610 77.0 1e-174 MTLDLIKIRRDLHQIPEIGLEEFKTQAYLLERIAEMTEGKDFVEQRTWRTGILVYLHGHA PEKTIGWRTDIDGLPIVEETGLDFKSTHEGRMHACGHDMHMTTALGLLDQMLQVQPKNNM LFLFQPAEENEAGGMLIYEDGAFGDWLPDEFYGLHVRPDFKVGDIATNTSTLFAGTCEVL VTFKGKGGHAAFPHEANDALAAASYFITQVQTIVSRNVDPIQGGVVTFGSFHAGTTNNVI AETAEVYGTIRTLTQEMSLLIQKRVRQIAEGVAASFGMEVDIMLKQGGYLPVENNPALAK ELMSFFDASPEVNLIDCPPAMTGEDFGYLLSKVPGVMFWLGIDTPYALHHPKMSPNEDAL AFAVAEIGKFLKHKAEA >gi|311101983|gb|AEKO01000002.1| GENE 124 108483 - 109010 476 175 aa, chain + ## HITS:1 COG:SP2095 KEGG:ns NR:ns ## COG: SP2095 COG0212 # Protein_GI_number: 15901910 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 172 1 173 179 167 60.0 9e-42 MKNELRKTVLAQLTSQEPETKAKIDKHLLEQLIALPAYKDAQVIATYLSFPHEYDTSLLI NQALKDGKRLLIPKTYKQGRMIFVDYDPDNLVATSFGLMEPASDLAVEKSEIDLIHVPGV VFNDEGYRIGYGAGYYDRYLSDFEGETVSTVYPCQKHDFQPDNYDIPVKEVVTCK >gi|311101983|gb|AEKO01000002.1| GENE 125 109001 - 109675 645 224 aa, chain + ## HITS:1 COG:SP2094 KEGG:ns NR:ns ## COG: SP2094 COG0705 # Protein_GI_number: 15901909 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Streptococcus pneumoniae TIGR4 # 7 219 7 219 225 164 42.0 1e-40 MQINEWKKYPATYLLLGLTTLTFICQYLLNGFQATSPLSLFKMGAMYGAFVQYSPLNLWR LVTPIFVHIGVEHFLFNMLALYFMGKMAEQIFGTLRFLGLYLLAGVMGNAFTLLFTPNVI AAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYLALIIINLIFNLFTPSVGITGHLGGL VGGALAAIFLANKVESRLFSKGWRSTALLTYMLLLLILLGFTYL >gi|311101983|gb|AEKO01000002.1| GENE 126 109721 - 110635 1165 304 aa, chain - ## HITS:1 COG:SP2092 KEGG:ns NR:ns ## COG: SP2092 COG1210 # Protein_GI_number: 15901907 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 5 299 4 298 299 505 88.0 1e-143 MKNQKVRKAIIPAAGLGTRFLPATKALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTG KSKRSIEDHFDSNFELEYNLEQKGKTDLLKLVNDTTAINLHFIRQSHPRGLGDAVLQAKA FVGNEPFVVMLGDDLMDITNDKAVPLTKQLINDYEETHASTIAVMPVPHEEVSSYGVIAP QGKGENGRYSVETFVEKPNPEDAPSDLAIIGRYLLTPEIFGILETQEPGAGNEVQLTDAI DKLNKTQRVFAREFTGDRYDVGDKFGFMKTSIDYALKHPQVKDDLKQYLIDLGHKLEGKA AKKD >gi|311101983|gb|AEKO01000002.1| GENE 127 110653 - 111675 1208 340 aa, chain - ## HITS:1 COG:SPy0226 KEGG:ns NR:ns ## COG: SPy0226 COG0240 # Protein_GI_number: 15674414 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 1 337 1 337 338 575 87.0 1e-164 MKKQKIAVLGPGSWGTALAQVLNDNGHEVRIWGNIPEQIDEINEKHTNTRYFKDVVLDEN IKAYKELSEALDSVDAVLFVVPTKVTRLVAKQVAELLDHEVVVMHASKGLEPGTHERLST ILEEEIPKELRSEIVVVSGPSHAEETIVRDITLITAASKDLEAARYVQGIFSNSYFRLYT NSDVIGVETAGALKNIIAVGAGALHGMGYGDNAKAAVITRGLAEITRLGVKLGADPLTYS GLSGVGDLIVTGTSIHSRNWRAGDALGRGEKLEDIERNMGMVIEGISTTKVAYEIAQELG VYMPITTAIYKSIYEGADIKESILNMMSNELRSENEWDKK >gi|311101983|gb|AEKO01000002.1| GENE 128 111794 - 112354 497 186 aa, chain - ## HITS:1 COG:no KEGG:STER_1808 NR:ns ## KEGG: STER_1808 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 148 1 151 151 214 83.0 1e-54 MRQKTFIKQTSLAILLYFICLALAVAIDLIFFKVKNMYHTPALAAIFAGWVYLGLIRKTK QFGAITCLGIFISLFFFASGHFVLAFLPSFLAGLVADFLAKKGNYENSKLNLLSYMIFSL GNLAPIITMWLAPKAYIAQLLAKGKTQDYVNQVMVPFTASHVLILIGGTLMAALIGGYIA QNWLKK >gi|311101983|gb|AEKO01000002.1| GENE 129 112363 - 113064 503 233 aa, chain - ## HITS:1 COG:SP1215 KEGG:ns NR:ns ## COG: SP1215 COG2116 # Protein_GI_number: 15901077 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 233 33 265 265 212 50.0 4e-55 MLAGAYLTMSTAVGIIGADVIATGIPALSRFVFAFIFAIGLVFVLIFNGELATSNMMFLT SGAYYGKIKWSKMCTILLYCTFFNFVGALILAWFFNQSFSFQHLTDKSFLVTAVSTKLGK TDWMNFTEGITANMFVNIAILGYMLLKEESAKIFIALSAIFMFVFLINEHLIANFASFML LGFNGVRDAVDNFTLANILRQWIVVFFGNWIGGGIFIGLAYSWLNKTKTPHID >gi|311101983|gb|AEKO01000002.1| GENE 130 113292 - 114494 916 400 aa, chain - ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 190 383 1 194 196 275 71.0 2e-73 MRTVFGIDVSKASSEVAILVNGERVHSYTMPNDIIGFSHLLKDLKTVSNPEIIFEATGVY SRRLQAFLEENSYDYTRLNPLEAKKQLDSLRVRKTDKIDAEKLASSQFVLNRKPTYVQEE VYQNLHDLSRFYQNLTEDIVRTKNRLHKVLQVAFPEIENLLSTPTGEQYWNLVSIFPTKH WVLELSEVELKETIRNSTSKRISENRVGNLAEKLVGLAKQSYSAISKTSPMIEEVKYNAQ ELIRLTNRREQVLQQLIALAEPLPEYEILLSIPGIAETTATSIIGELGDIRRFKSANQIN AFIGIDLKHYESGDFLAQEHITKRGNPYARKIMYKCIHNIASASHTNPCHIADFYEKRKR QSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYTLAKSH >gi|311101983|gb|AEKO01000002.1| GENE 131 114898 - 116145 1433 415 aa, chain - ## HITS:1 COG:SP1472_2 KEGG:ns NR:ns ## COG: SP1472_2 COG2461 # Protein_GI_number: 15901322 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 188 413 1 226 227 409 89.0 1e-114 MKFVGLVGANYDQSYNRKLLEFIRRHFKIKFELEVLEIDEVPMFNQDEKWDESFQLRLLN NKITRADGVIIATPEHNHTISAALKSVLEWLSFEVHPFENKPVMIVGASYYDQGTSRAQV HLRKILEAPGVNAYTLPGNEFLLGKAKEAFDLEGNITNEGTINFLEQCLDNFIQYVGVVS KLKKPKPIEPEDLDCNNPIATTVTEVDPDDPEWVEKVAEITGAVSGDTYVKLDHGILTVN QIDMFLKAMPFELTYADDNNQFLYYNNAHQDPDTMFAKRVPPQSGSRMSTVHGSLPPARM KNVEWVIGTLRNGNQEYVRTIVPGSPEGVINTHNYQAMYYDDGSYAGINEIVFNFKPWLD WYLETTGQRLVGGSGPFAPAAASHGGSDATSGASDAGGHGDASSAADATSGASSY >gi|311101983|gb|AEKO01000002.1| GENE 132 116164 - 116766 744 200 aa, chain - ## HITS:1 COG:SP1471 KEGG:ns NR:ns ## COG: SP1471 COG0431 # Protein_GI_number: 15901321 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 1 200 2 201 201 335 84.0 4e-92 MKFIGLVGTNSKRSTNRQLLQYIQKHFADKAEIELVEIKDLPVFNKPANKQLPESALEIA KKIDEADGVIIGTPEYDHSIPAVLMNALAWLSYGVFPLLNKPVMITGASYGTLGASRAQL QLRQILNAPEIKANVLPDEFLLSHSLQAFDSNGDLVDLDVIKKLDAIFDDFRLYVKITGK LSHATELLHKEAEDFDWESL >gi|311101983|gb|AEKO01000002.1| GENE 133 116979 - 117425 618 148 aa, chain + ## HITS:1 COG:SP0021 KEGG:ns NR:ns ## COG: SP0021 COG0756 # Protein_GI_number: 15899969 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Streptococcus pneumoniae TIGR4 # 3 147 2 146 147 256 90.0 8e-69 MTKIRGFELVSTYTNRDLLPKRETAHAAGYDLKVAENTVIAPGEIVLVPTGVKAYMQPGE VLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQPVTLEVGERMV QAVFAPFLIADGDEADGVRTGGFGSTGK >gi|311101983|gb|AEKO01000002.1| GENE 134 117823 - 118965 1009 380 aa, chain + ## HITS:1 COG:SPy0236 KEGG:ns NR:ns ## COG: SPy0236 COG1066 # Protein_GI_number: 15674421 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Streptococcus pyogenes M1 GAS # 1 380 74 453 453 667 92.0 0 MDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLANKGTVLYVSGEESAEQIKLR SERLGDIDNEFYLYAETNMQAVRSQVEAIKPDFLIIDSIQTIMSPEISGVQGSVSQVREV TAELMQIAKTNNIATFIVGHVTKEGQLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNR FGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTP TVFGNAKRTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVA ISSSYKELPTNPQEAFIGEIGLTGEIRRVARIEQRINEAAKLGFTKIYAPKNSLHGMKIP EGIQVIGVTTVGEVLKKVFS >gi|311101983|gb|AEKO01000002.1| GENE 135 119053 - 119748 711 231 aa, chain + ## HITS:1 COG:SPy0238 KEGG:ns NR:ns ## COG: SPy0238 COG2013 # Protein_GI_number: 15674423 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 231 1 230 231 314 71.0 9e-86 MQFFTDSNMQFPLVELSLNQGETVFIQRGSMVYHTPNVTLTTKLNASGSGLGRFVKAVGR SMVSGESSFITQVISQSNNGYIALAPDSPGQVIPLYLGEKQYRLNDGAFLALDGTAYYTM ELQSVGKALFGGQGGFFVMTTRGQGTLLANAYGSIKKIELNNQEVTIDNAHVVAWSQTLD YNIHLENGFWQSIGTGEGVVNTFRGTGEIYVQSLNLQTFAGLLNRYLPKRS >gi|311101983|gb|AEKO01000002.1| GENE 136 119899 - 120396 534 165 aa, chain + ## HITS:1 COG:SP0024 KEGG:ns NR:ns ## COG: SP0024 COG0288 # Protein_GI_number: 15899971 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Streptococcus pneumoniae TIGR4 # 1 163 1 163 165 275 83.0 3e-74 MSYFENFLNANKAYVDLHGTAHLPLKPKTKVAIVTCMDSRLHVAQALGLALGDAHILRNA GGRVTEDMIRSLVISQQQMGTREIVVLHHTDCGAQTFKNDEFTAYLNKELGVDVSDQDFL PFTDVEESVREDMAILRQSPLIPEDVIISGAVYDVDTGRMTQVLP >gi|311101983|gb|AEKO01000002.1| GENE 137 120490 - 120843 348 117 aa, chain - ## HITS:1 COG:no KEGG:str1819 NR:ns ## KEGG: str1819 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 117 1 117 117 109 94.0 4e-23 MILYKFFAIAFLILTPIFAFIIHRFFSLKYLGLNFADLTFPLYFIEVVAVSARFFTHSFL PYITILLSLVAIIITIQMLRKAQSFKFKRFLKLFWRISFFITSLFYLGTVILIFIVS >gi|311101983|gb|AEKO01000002.1| GENE 138 121015 - 121440 698 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477974|ref|ZP_04062585.1| ribosomal protein L11 [Streptococcus salivarius SK126] # 1 141 1 141 141 273 100 3e-72 MAKKVENIVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGMIIPVVISV YEDKSFDFITKTPPAAVLLKKAAGVEKGSGTPNSVKVASVTRAQVQEIAETKMPDLNAAN IESAMRMIEGTARSMGFTVTD >gi|311101983|gb|AEKO01000002.1| GENE 139 121489 - 122229 1200 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55737774|gb|AAV61416.1| 50S ribosomal protein L1 [Streptococcus thermophilus LMG 18311] # 1 246 1 246 246 466 97 1e-130 MEDESRYDHITQGEIINMAKKSKQMRAALEKIDSTKAYSVEEAVALAQETNFAKFDATVE VSYNLNIDVKKADQQIRGAMVLPNGTGKTQRVLVFARGAKAEEAKAAGADFVGEDELVAK INGGWLDFDVVVATPDMMAIVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGKITY RADKAGNVQAIIGKVSFEAEKLVENFKAFNDAIQKAKPATAKGTYITNLSITTTQGAGIK VDPNSL >gi|311101983|gb|AEKO01000002.1| GENE 140 122426 - 122890 405 154 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 149 5 147 157 192 60.0 2e-49 MAQKAHSLSHTKWMCKYHIVFTPKYRRKIIYNQYRSSLGEIFHRLCQYKGVEIIEGHLMP DHVHMLVSIPPRMSVASFMGYLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQEQEKHDIALDKLSVKEYENPFRDNGK >gi|311101983|gb|AEKO01000002.1| GENE 141 123174 - 125144 398 656 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984587|ref|ZP_01817855.1| hypothetical protein CGSSp3BS71_01047 [Streptococcus pneumoniae SP3-BS71] # 443 656 26 234 234 157 41 2e-37 MKKSKVFLLVAVGLLSVGVLTACSSSSKTSGKTYNYVYGGDPATLDYVSTNKKNMTTAVS NGVDGLFENDQYGNLKPSVAENWSVSQDGLTYTYKIRKGVKWYTSDGEEYANVTAKDFVT GLKHAADTNSEAIYLLQNSVKGLNDYLSGANKDFSNVGIKAVDDYTLQYTLSQPEPYWNS KLTYSVTWPVNAGFLKSKGKDFGKSTDPTSILYNGPYLLKALTTKSSIEFTKNENYWDKD NVYFDNIKLTYDDGSDQESLERKFTDGVYTLARLFPNSSNYSKVSKKYKDNIYTTQPAAS VEGVGINIDRQTYNNTSKENDQQKSSTKAALLNKDFRQSLGFAIDRTNYAAQLNGKESAN TAVRNIFVKPDFVQADGKDFGTMVMDQLPAYGDEWSGVNLADSQDGLYNPEKAKAEFAKA KEALQAEGVQFPIHLDVPVNQTSKIFVNQVQSLKQSIEATLGKENVVIDIHQLSADDFYN ITYYASNAAAEDWDLSVGVAWEPDYLDPSTYLDVLKTTSSENTKSFMGYDNPNSQAVEKV GLKEYDQLVEDASKETTDLTRRYEKYAKAQAWLTDSALYLPTTAYSGAATVVSRIQPFSG AYAQAGDKGSTYYFKYIKSQDDIVTKKQYDSAYKDWLKEKAKSNDKAQKDLAKHVK >gi|311101983|gb|AEKO01000002.1| GENE 142 125326 - 126780 1845 484 aa, chain + ## HITS:1 COG:SP2069 KEGG:ns NR:ns ## COG: SP2069 COG0008 # Protein_GI_number: 15901888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Streptococcus pneumoniae TIGR4 # 1 481 1 481 486 889 93.0 0 MAKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFIIRIEDTDRKRHVEDGERSQL DNLRWLGIDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYKSYVTEEELATERERQE AAGETPRYINEFLGMTEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDIVKGDIEFEG GNIGGDWVIQKKDGYPTYNFAVVVDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPE FGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSR EELIKLFDENRLSKSPAAFDQKKLDWMSNDYIKNADFDKIFALCKPFLEEAGRLTDKAEK LVELYKPQMTAAEEIVPLTDLFFEDFPELTEAEKEVMAGETVPTVLEAFKAKLEAMSDDE FVVENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIKHIDQV LATL >gi|311101983|gb|AEKO01000002.1| GENE 143 127167 - 127415 207 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228478036|ref|ZP_04062647.1| ## NR: gi|228478036|ref|ZP_04062647.1| putative histidine kinase of the competence regulon, ComD [Streptococcus salivarius SK126] # 1 40 1 40 435 69 85.0 6e-11 MIVLFTVPRLLALLIVSRDMSGLLKAWKSKCWFVVGSLLLICRRHYGMAFSTSAFLPFLR INFKNKCNIYSNSSIGASQAVL >gi|311101983|gb|AEKO01000002.1| GENE 144 128738 - 129937 1573 399 aa, chain + ## HITS:1 COG:L126739 KEGG:ns NR:ns ## COG: L126739 COG0137 # Protein_GI_number: 15672106 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Lactococcus lactis # 1 394 2 396 398 600 72.0 1e-171 MSKEKVILAYSGGLDTSVAITWLKKDYDVIAVCMDVGEGKNLEFIHDKALTVGAVESYVL DVKDEFAEDYVLPALQAHAYYEQKYPLVSALSRPIISKKLVEIAHKTGATTIAHGCTGKG NDQVRFEVAIAALDPDLKVVAPVREWKWSREEEIEYAKANGVPVPADLDNPYSVDQNLWG RANECGVLENPWNQAPEEAFGITNSPESAPDEAEYVDVTFKEGKPVALNGKEMKLADLIQ EMNVIAGKHGVGRIDHVENRLVGIKSREIYECPGAIALLTAHKEIEDLTLVREVSHFKPI LENELSNLIYNALWFSPATQAIIAYIKETQKVVNGIAKVKLYKGHAQVVARQSANSLYDE NLATYTSADSFDQDAAIGFIKLWGLPTQVNSQVNHPFDN >gi|311101983|gb|AEKO01000002.1| GENE 145 130264 - 131664 1278 466 aa, chain + ## HITS:1 COG:L0114 KEGG:ns NR:ns ## COG: L0114 COG0165 # Protein_GI_number: 15672107 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Lactococcus lactis # 6 460 4 458 459 652 71.0 0 MAENHKLWGGRFEASLEKWVEEFGASISFDQKMAEFDLKGSIAHVTMLGETGIITKEESL QIKQGLEELLEEYKAGKLEFDVSNEDIHMNMESLLTAKIGPVAGKLHTARSRNDQVATDM HLYLKAKLVEVIEKLDNLRGTLVNLADKHTYTIMPGYTHLQHAQPISFGHHLMAYYNMFT RDAERFEFNIKHTDISPLGAAALAGTTFPIDRNMTSDLMGFAKPYSNSLDAVSDRDFILE FLSNSSILMMHMTRICEEIINWCSNEFKFVTLSDTFSTGSSIMPQKKNPDMAELIRGKSG RVYGNLIGLLTVMKSLPLAYNKDLQEDKEGMFDTVETITVAIDILAGMLNTMTVNDKHMA DSTEKDFSNATELADYLAAKGLPFREAHEIVGKLVLECTKAGYYLQDVPLERYQEVSDLI EEDIYETLKSHTAVERRHSLGGTGFDQVKWQIKEAQKALKNKSLRP >gi|311101983|gb|AEKO01000002.1| GENE 146 131733 - 132068 105 111 aa, chain + ## HITS:1 COG:SPy0246 KEGG:ns NR:ns ## COG: SPy0246 COG0594 # Protein_GI_number: 15674428 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Streptococcus pyogenes M1 GAS # 1 108 1 108 119 126 62.0 1e-29 MKKSYRVKKEKDFKALFDAGHSVANRKFVVYCLDRNLPHFRVGLSVSKRLGNAVTRNRVK RRLRHALMDMSSQLEHQDFVVIARKGVEDLSYQDIYSNLVHVLKIAKLYKG >gi|311101983|gb|AEKO01000002.1| GENE 147 132137 - 132991 715 284 aa, chain + ## HITS:1 COG:SPy0247 KEGG:ns NR:ns ## COG: SPy0247 COG0706 # Protein_GI_number: 15674429 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Streptococcus pyogenes M1 GAS # 11 284 1 275 275 274 56.0 2e-73 MNGSEAVLYRIKKEFLVKKKLNIFVLGAGALLLLSACGRSDVTSHSTGLWERLILMFGKA IQGLSFGGSIGLGIIIFTILIRAVMIPLYNRQIKSSRELQELQPELRRLQSEYPGRENRE ALAYAQQELYKEHGVNPYASLLPLIIQFPILMALYGALTRVPELREGTFLWVDLGQKDPY FILPILAAAFTFLSTWLTNKAAKDRSAMLLVMNIMLSIFIFWFGTQISSGVALYWAVSNA FQVVQILAFNNPFKIIEERNRLEAEEKEREAKIRRAKKKAHKRK >gi|311101983|gb|AEKO01000002.1| GENE 148 133003 - 134052 841 349 aa, chain + ## HITS:1 COG:SPy0248 KEGG:ns NR:ns ## COG: SPy0248 COG1847 # Protein_GI_number: 15674430 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 347 1 301 304 248 46.0 1e-65 MVVYSGRTVEQAIEKGLKDLNLPRMKAHIKVISREKKGFLGFGKKPARVSVEPINEKIAH EADQNTVKVATDAVKQPDDFVTSSKEETIASKKVTKLVTVSDNKEEAQEILTQPVATETF GKELPGKIQEQPKATIIPLSVKRESSEEDATEPEVTSLAPKLEPVAQLQTVETSESEDDF SSFVASEFSSDESSESNLEDVQAAADDVLSYLEKIIYEMDVDASLEVSHNRRNIIIQIET DQPGRVIGYHGKVLKSLQLLAQNYLHDRHSKRSSVVLNVRDYLEQRTETLIDLAEKIAAK VKETGREYVMDPMTNSERKIIHKSLSQIEGVESHSEGDDPNRYVVVTKV >gi|311101983|gb|AEKO01000002.1| GENE 149 134129 - 134344 195 71 aa, chain - ## HITS:1 COG:SA0062 KEGG:ns NR:ns ## COG: SA0062 COG2801 # Protein_GI_number: 15925769 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Staphylococcus aureus N315 # 1 70 55 124 125 68 54.0 2e-12 MSRKETPADNACIEWFHPVLKYETFYLHKWRNLTKDSITDIVKNYILFYNETRIQQKLND QSPVEYRKLVV >gi|311101983|gb|AEKO01000002.1| GENE 150 134294 - 134497 99 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEPFDTGIICWCFFSGHGAGDAFFYSTTVIGLFFLLMNLLVLQDMVKIISKYFLTRACYY YKIIWYV >gi|311101983|gb|AEKO01000002.1| GENE 151 134556 - 134690 220 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674431|ref|NP_268605.1| 50S ribosomal protein L34 [Streptococcus pyogenes M1 GAS] # 1 44 1 44 44 89 97 9e-17 MKRTYQPSKIRRQRKHGFRHRMSTKNGRRVLAARRRKGRKVLSA >gi|311101983|gb|AEKO01000002.1| GENE 152 135059 - 135340 206 93 aa, chain + ## HITS:1 COG:SP1064 KEGG:ns NR:ns ## COG: SP1064 COG1943 # Protein_GI_number: 15900934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 93 65 157 157 155 76.0 3e-38 MLVSIPFKLGISSFIGYLKGESSLMVFDRHANLKYKYGDRKFWCRGFYVDTVGQNQKRIE EYIRNPLQEDMIADQFSLFEEYDPFTGEKNKRK >gi|311101983|gb|AEKO01000002.1| GENE 153 135721 - 136863 675 380 aa, chain + ## HITS:1 COG:SPy0203 KEGG:ns NR:ns ## COG: SPy0203 COG0343 # Protein_GI_number: 15674403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 380 1 380 380 759 91.0 0 MTDFPIKYRLIKKEKYTGARLGEIITPHGTFPTPMFMPVGTQATVKTQSPEELKQMGSGI ILANTYHLWLRPGDELVAKAGGLHKFMNWDQAILTDSGGFQVYSLAEKRNISEEGVTFKN HLNGSKMFLSPEKAISIQNNLGSDIMMSFDECPQFYQPYDYVKKSIERTSRWAERGLKAH RRPHDQGLFGIVQGAGFEDLRRQSAHDLVSMDFPGYSIGGLAVGETHEEMNAVLDFTVPL LPENKPRYLMGVGAPDSLIDGVIRGVDMYDCVLPTRIARNGTCMTSNGRLVVKNAAYAED FSPIDPECDCYTCKNYTRAYVRHLLKADETFGIRLTSYHNLYFLVNLMSKVRQAIVDDNL LEFRQDFIEKYGYNASNRNF Prediction of potential genes in microbial genomes Time: Sun May 29 18:19:33 2011 Seq name: gi|311101897|gb|AEKO01000003.1| Streptococcus vestibularis F0396 ctg1126932565718, whole genome shotgun sequence Length of sequence - 75437 bp Number of predicted genes - 85, with homology - 84 Number of transcription units - 34, operones - 18 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 19 - 1251 736 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 1411 - 1470 8.2 - Term 1488 - 1525 5.1 2 2 Tu 1 . - CDS 1542 - 2105 820 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Term 2122 - 2168 9.5 3 3 Op 1 32/0.000 - CDS 2169 - 2522 558 ## COG0858 Ribosome-binding factor A - Term 2542 - 2575 1.1 4 3 Op 2 10/0.000 - CDS 2615 - 5449 3273 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 5 3 Op 3 8/0.000 - CDS 5468 - 5770 489 ## PROTEIN SUPPORTED gi|228476596|ref|ZP_04061278.1| ribosomal protein HS6-type 6 3 Op 4 22/0.000 - CDS 5763 - 6059 339 ## COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination 7 3 Op 5 32/0.000 - CDS 6080 - 7279 678 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 8 3 Op 6 . - CDS 7345 - 7818 540 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 7877 - 7936 8.0 - Term 7830 - 7862 1.1 9 4 Op 1 3/0.125 - CDS 7960 - 9213 1110 ## COG1316 Transcriptional regulator 10 4 Op 2 3/0.125 - CDS 9222 - 9815 221 ## PROTEIN SUPPORTED gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase 11 4 Op 3 1/0.125 - CDS 9736 - 10179 301 ## COG0802 Predicted ATPase or kinase - Prom 10204 - 10263 8.3 - Term 10398 - 10443 3.2 12 5 Tu 1 . - CDS 10468 - 11889 1805 ## COG2252 Permeases - Prom 11923 - 11982 6.4 + Prom 11850 - 11909 7.1 13 6 Tu 1 . + CDS 12096 - 12908 922 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 12913 - 12958 12.3 - Term 12901 - 12946 8.5 14 7 Tu 1 . - CDS 12953 - 13684 854 ## COG1878 Predicted metal-dependent hydrolase - Prom 13706 - 13765 1.6 + Prom 13878 - 13937 8.4 15 8 Op 1 11/0.000 + CDS 14053 - 15060 1213 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 16 8 Op 2 13/0.000 + CDS 15078 - 15878 1052 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 17 8 Op 3 4/0.000 + CDS 15894 - 16808 1064 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 18 8 Op 4 . + CDS 16821 - 17207 411 ## COG4687 Uncharacterized protein conserved in bacteria + Term 17218 - 17273 8.1 + Prom 17212 - 17271 10.3 19 9 Op 1 11/0.000 + CDS 17470 - 18462 1415 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 20 9 Op 2 13/0.000 + CDS 18530 - 19345 1168 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 21 9 Op 3 4/0.000 + CDS 19360 - 20271 1110 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 20275 - 20318 6.8 22 9 Op 4 3/0.125 + CDS 20350 - 20724 367 ## COG4687 Uncharacterized protein conserved in bacteria + Term 20797 - 20835 0.5 + Prom 20780 - 20839 5.7 23 10 Tu 1 . + CDS 20934 - 22211 1494 ## COG0172 Seryl-tRNA synthetase + Term 22217 - 22256 2.1 - Term 22377 - 22425 6.8 24 11 Op 1 . - CDS 22513 - 23067 435 ## COG1335 Amidases related to nicotinamidase 25 11 Op 2 . - CDS 23087 - 23734 648 ## SMU.1919 hypothetical protein - Term 23747 - 23791 1.5 26 11 Op 3 1/0.125 - CDS 23799 - 25109 1739 ## COG1160 Predicted GTPases - Prom 25141 - 25200 1.7 - Term 25146 - 25182 -1.0 27 12 Op 1 8/0.000 - CDS 25215 - 26117 863 ## COG1484 DNA replication protein 28 12 Op 2 6/0.000 - CDS 26121 - 27296 921 ## COG3611 Replication initiation/membrane attachment protein 29 12 Op 3 1/0.125 - CDS 27293 - 27772 526 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 27801 - 27860 4.7 - Term 27819 - 27856 3.8 30 13 Op 1 40/0.000 - CDS 27894 - 29411 1141 ## COG0642 Signal transduction histidine kinase 31 13 Op 2 1/0.125 - CDS 29408 - 30097 799 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 30189 - 30248 7.0 32 14 Tu 1 . - CDS 30254 - 30790 679 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein - Prom 30899 - 30958 7.1 + Prom 30909 - 30968 6.4 33 15 Op 1 1/0.125 + CDS 31089 - 31802 694 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 31810 - 31845 -0.8 34 15 Op 2 17/0.000 + CDS 31850 - 33247 1005 ## COG0168 Trk-type K+ transport systems, membrane components 35 15 Op 3 . + CDS 33274 - 33945 636 ## COG0569 K+ transport systems, NAD-binding component 36 16 Op 1 1/0.125 - CDS 33881 - 34132 59 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold 37 16 Op 2 . - CDS 34185 - 36161 2420 ## COG0021 Transketolase - Prom 36208 - 36267 7.5 - Term 36288 - 36341 9.8 38 17 Op 1 34/0.000 - CDS 36371 - 37201 1099 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 39 17 Op 2 3/0.125 - CDS 37194 - 38870 249 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 40 17 Op 3 2/0.125 - CDS 38936 - 39481 627 ## COG4720 Predicted membrane protein 41 17 Op 4 . - CDS 39491 - 40339 863 ## COG1912 Uncharacterized conserved protein - Prom 40365 - 40424 6.4 - Term 40447 - 40479 3.1 42 18 Tu 1 . - CDS 40493 - 41701 1337 ## COG3633 Na+/serine symporter - Prom 41755 - 41814 5.5 43 19 Op 1 32/0.000 - CDS 41824 - 42516 803 ## COG2011 ABC-type metal ion transport system, permease component 44 19 Op 2 1/0.125 - CDS 42516 - 43583 1410 ## COG1135 ABC-type metal ion transport system, ATPase component 45 19 Op 3 1/0.125 - CDS 43576 - 44949 1414 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Term 44967 - 44996 1.2 46 19 Op 4 2/0.125 - CDS 45010 - 45912 1076 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 45996 - 46055 9.4 - Term 46031 - 46067 3.2 47 20 Tu 1 . - CDS 46072 - 46920 912 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 46943 - 47002 6.5 - Term 47033 - 47081 6.0 48 21 Op 1 34/0.000 - CDS 47085 - 47801 182 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 49 21 Op 2 8/0.000 - CDS 47803 - 48582 368 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 50 21 Op 3 . - CDS 48579 - 49556 1015 ## COG0310 ABC-type Co2+ transport system, permease component 51 21 Op 4 9/0.000 - CDS 49560 - 50399 777 ## COG0829 Urease accessory protein UreH 52 21 Op 5 17/0.000 - CDS 50401 - 51015 664 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 53 21 Op 6 16/0.000 - CDS 51045 - 51758 698 ## COG0830 Urease accessory protein UreF 54 21 Op 7 10/0.000 - CDS 51748 - 52200 650 ## COG2371 Urease accessory protein UreE - Prom 52279 - 52338 6.0 - Term 52276 - 52329 3.1 55 21 Op 8 17/0.000 - CDS 52341 - 54059 2258 ## COG0804 Urea amidohydrolase (urease) alpha subunit 56 21 Op 9 13/0.000 - CDS 54075 - 54386 459 ## COG0832 Urea amidohydrolase (urease) beta subunit 57 21 Op 10 . - CDS 54399 - 54701 500 ## COG0831 Urea amidohydrolase (urease) gamma subunit 58 21 Op 11 . - CDS 54726 - 55241 536 ## STER_0322 UreA transporter - Prom 55263 - 55322 5.7 + Prom 55802 - 55861 5.6 59 22 Op 1 . + CDS 55996 - 56478 200 ## stu0277 urease cluster protein, truncated 60 22 Op 2 . + CDS 56563 - 56811 306 ## gi|3850213|gb|AAC72028.1| ure cluster protein + Term 56869 - 56899 1.1 - Term 56989 - 57044 15.1 61 23 Tu 1 . - CDS 57052 - 57384 310 ## str0276 membrane protein - Prom 57405 - 57464 4.4 62 24 Op 1 1/0.125 - CDS 57495 - 58670 226 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 63 24 Op 2 . - CDS 58670 - 59590 858 ## COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain - Prom 59696 - 59755 12.2 - Term 59717 - 59750 4.0 64 25 Tu 1 . - CDS 59759 - 60601 276 ## COG1396 Predicted transcriptional regulators - Prom 60673 - 60732 8.5 - Term 60773 - 60811 8.1 65 26 Op 1 2/0.125 - CDS 60814 - 61464 531 ## COG0671 Membrane-associated phospholipid phosphatase 66 26 Op 2 . - CDS 61467 - 62024 645 ## COG3601 Predicted membrane protein - Prom 62223 - 62282 6.9 + Prom 61984 - 62043 4.3 67 27 Tu 1 . + CDS 62068 - 62241 56 ## - Term 62225 - 62273 2.5 68 28 Tu 1 . - CDS 62334 - 62843 620 ## COG0219 Predicted rRNA methylase (SpoU class) - Prom 62963 - 63022 6.2 + Prom 62900 - 62959 5.0 69 29 Op 1 17/0.000 + CDS 63131 - 64480 1251 ## COG0569 K+ transport systems, NAD-binding component 70 29 Op 2 . + CDS 64487 - 65926 1436 ## COG0168 Trk-type K+ transport systems, membrane components + Term 65930 - 65987 12.1 71 30 Op 1 2/0.125 - CDS 65949 - 66197 72 ## COG0759 Uncharacterized conserved protein 72 30 Op 2 12/0.000 - CDS 66197 - 66922 894 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 66943 - 67002 1.6 73 30 Op 3 21/0.000 - CDS 67015 - 67596 583 ## COG1386 Predicted transcriptional regulator containing the HTH domain 74 30 Op 4 3/0.125 - CDS 67589 - 68302 587 ## COG1354 Uncharacterized conserved protein 75 30 Op 5 2/0.125 - CDS 68302 - 69075 411 ## COG0582 Integrase 76 30 Op 6 3/0.125 - CDS 69017 - 69499 513 ## COG0517 FOG: CBS domain 77 30 Op 7 7/0.000 - CDS 69496 - 69993 415 ## COG0622 Predicted phosphoesterase 78 30 Op 8 3/0.125 - CDS 69999 - 70973 416 ## PROTEIN SUPPORTED gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase 79 30 Op 9 3/0.125 - CDS 70966 - 71781 752 ## COG0796 Glutamate racemase - Term 71803 - 71838 1.8 80 30 Op 10 . - CDS 71846 - 72097 383 ## COG3763 Uncharacterized protein conserved in bacteria - Prom 72284 - 72343 8.4 + Prom 72250 - 72309 7.6 81 31 Op 1 . + CDS 72338 - 72652 202 ## str0253 TetR/AcrR family transcriptional regulator 82 31 Op 2 . + CDS 72627 - 72875 257 ## stu0253 TetR/AcrR family transcriptional regulator + Term 72876 - 72909 5.1 - Term 72855 - 72903 11.2 83 32 Tu 1 . - CDS 72904 - 74157 1540 ## COG0019 Diaminopimelate decarboxylase - Prom 74240 - 74299 9.2 + Prom 74127 - 74186 5.5 84 33 Tu 1 . + CDS 74402 - 74995 602 ## STER_0298 hypothetical protein + Prom 75003 - 75062 2.5 85 34 Tu 1 . + CDS 75211 - 75399 154 ## stu0250 hypothetical protein Predicted protein(s) >gi|311101897|gb|AEKO01000003.1| GENE 1 19 - 1251 736 410 aa, chain - ## HITS:1 COG:SA2199 KEGG:ns NR:ns ## COG: SA2199 COG2348 # Protein_GI_number: 15927989 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Staphylococcus aureus N315 # 48 399 44 403 416 130 27.0 5e-30 MSIRVKSVSFEDYQNTQVTAKCANFLQSAEMAKLQESQDYIEKVEALVFERDGLRVGQAI VVYKKSFRIFKKALLLHGPLLDYHSLASLTELLEALILYLRKKNIATLSIHPYLANLIRN EKLENIEVDIASDVLEVFETLGFEHSLDSEQSLVVNQMFVKSIESFASSDEIHAAFSPSL KRDLKKFTDMNVKTEELDEHQLDQFYDILSRTAERKGFSVHPLVYFQNLKKYFGESAKFM LAYLDCPAYLAYLDKNIQSFEAKIQALKEGPQKKRTKGQIADAEDQLRSYYKRLEQFKSY QIKTDKLPLSAYLFMDYGPEIVSFYGGNDEAYLNFGGAVLLHWEMIKYAKSKAKKRFNFY GTIETEAASSGKGNFNFKRQFGGQLETLVGSFDKTLNPFYDIFKKTLGRH >gi|311101897|gb|AEKO01000003.1| GENE 2 1542 - 2105 820 187 aa, chain - ## HITS:1 COG:FN0535 KEGG:ns NR:ns ## COG: FN0535 COG1611 # Protein_GI_number: 19703870 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Fusobacterium nucleatum # 3 186 6 189 192 186 47.0 3e-47 MKVTVYLGANMGDNPSFKEATIALGRWIAKNGHILVYGGSKMGLMGVLGDTVLENGGQAH GIMPQFLKDREIAYEGLTSMTIVETMAERKTAMLEQGELFIALPGGLGTLEEISEAIAAA RVGKLDKPCVFFNLNGYYDAMKAMLGTMVAHDFLEAETAAKFLFTDNFSEIEAFVQSYTP PQLRRYR >gi|311101897|gb|AEKO01000003.1| GENE 3 2169 - 2522 558 117 aa, chain - ## HITS:1 COG:SP0557 KEGG:ns NR:ns ## COG: SP0557 COG0858 # Protein_GI_number: 15900469 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Streptococcus pneumoniae TIGR4 # 1 115 1 115 116 177 85.0 5e-45 MGNSFRVDRVGMEIKREVNEILQKKVRDPRVQDVTITDVQMLGDLSAAKVFYTIHSTLAS DNQKAQTGLEKATGTIKRELGKSLTMYKIPDLTFIKDESIEYGNKIDEMLRNLERKD >gi|311101897|gb|AEKO01000003.1| GENE 4 2615 - 5449 3273 944 aa, chain - ## HITS:1 COG:SP0556 KEGG:ns NR:ns ## COG: SP0556 COG0532 # Protein_GI_number: 15900468 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Streptococcus pneumoniae TIGR4 # 1 944 1 958 958 1111 73.0 0 MSKKRLYEIAKEVGVESKVVVAKAQELGLSVKSHSSSVEEADANRIASSLKGGTAKAESK PAPKATPTPKEEKVAPKVDKAPVAKSAPAKEASKAEVKEAPATPKKPQSRNFKAEREARA KAEAERRQNGGGRDNRNRNRNQQGNDQGKRQNNDRRNQNGNGQGNRNNGNRDNNSNRDRN FQGKQRNDQDRNKRNDAARNNQAGPRIDFKARAAALKAEQNAEYSRQSETRFREEKAAEQ RRAKEQEKARKEKQQAEVAAQKAVAEAKPAPKPAPAAQPAPAAQVQDTRRKKARPDKSRD NRRENEDGPKQTRNNKWNNQNQVRNQRNSNWNKNKNKKGKNNRGNSAPKPVTERKFHELP KEFEYTEGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGDTIELLMVDYGIEATK KEEVDNADIERFFVDEDYLNKDAMVERAPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGG ITQHIGAYQIEEGGKKITFLDTPGHAAFTSMRARGASVTDITILIVAADDGVMPQTIEAI NHSKAAGVPIIVAINKIDKPGANPERVIGELAEHGVISTAWGGDSEFVEISAKFGQNIEE LLETVLLVAEVEELKADPTVRAIGTVIEARLDKGKGAVATLLVQQGTLNVQDPIVVGNTF GRVRAMTNDLGRRIKTAAPSTPVSITGLNEAPMAGDHFAVYEDEKAARAAGEERAKRALM KQRQQTHRVSLDNLFDTLKAGEMKTVNVIIKADVQGSVEALAASLLKIDVEGVRVNVVHS AVGAINESDITLAEASDAVVIGFNVRPTPQARQQAETDEVEIRLHSIIYKVIEEIEDAMK GMLDPEFEEKIIGEAVIRETFKVSKVGTIGGFMVTNGKITRDSSARVIRDGVVIFDGKLA SLKHYKDDVKEVGNAQEGGLMIENYNDIKVDDVIEAYIMEEIKR >gi|311101897|gb|AEKO01000003.1| GENE 5 5468 - 5770 489 100 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228476596|ref|ZP_04061278.1| ribosomal protein HS6-type [Streptococcus salivarius SK126] # 1 100 1 100 100 192 99 3e-48 MNNTEKLSNMLGLAQRAGKLISGEELVIKAVQSGQARLVFLANDAGSNVTKKTTDKCNYY NIEVSTVFNALELSMAIGKPRKTVAVVDAGFSKKMRTLMD >gi|311101897|gb|AEKO01000003.1| GENE 6 5763 - 6059 339 98 aa, chain - ## HITS:1 COG:SPy1723 KEGG:ns NR:ns ## COG: SPy1723 COG2740 # Protein_GI_number: 15675573 # Func_class: K Transcription # Function: Predicted nucleic-acid-binding protein implicated in transcription termination # Organism: Streptococcus pyogenes M1 GAS # 1 98 1 98 98 153 82.0 8e-38 MAKTRKIPLRKSVVSGEIIDKRDLLRIVKTKDGEIFIDPTGKKNGRGAYIKLDNEEALQA KKKRAFNHSFSMDVPESFYDELIAYVDHKVKRRELGLE >gi|311101897|gb|AEKO01000003.1| GENE 7 6080 - 7279 678 399 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 380 9 375 537 265 39 4e-70 MSKEMLEAFRVLEEEKHINKEDIIDAVVESLKSAYKRRYGQSESAVVEFNEKTGDFQVFT VREVVDEVFDSRLEISLKDALAISSAYELGDKIRFEESVDEFGRVAAQSAKQTIMEKMRK QMREITYNDYKQHEGEIMQGTVERFDQRFIYVNLGALEAQLSRQDQIPGESFKSHDVIDV YVYKVENNPKGVNVFVSRSHPEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSH NPNVDAIGTIVGRGGSNIKKVVSRFHPTRLDAKTGIEVPVEENIDVIQWVEDPAEFIYNA IAPAEVDYVLFDEDDSKRATVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDIKSASEYEA LEAEKSEAATEEVVDEIVAEEATPVEVTTEEVTETTEAE >gi|311101897|gb|AEKO01000003.1| GENE 8 7345 - 7818 540 157 aa, chain - ## HITS:1 COG:SPy1725 KEGG:ns NR:ns ## COG: SPy1725 COG0779 # Protein_GI_number: 15675575 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 31 157 1 127 127 199 82.0 2e-51 MSQKIIDLVTAVVAPAIPEPYELVDIEYEKIGSDYILSVLIDKPGGITVEDTADLTEIIS PLLDTIQPDPFPDQYMLEVSSPGLERPLKTKEALKNAVGQYINVSLYKAIDKIKIFQGDL LTFDGETLTIDYLDKTRHKTVEIPYQTVAKARLAVKL >gi|311101897|gb|AEKO01000003.1| GENE 9 7960 - 9213 1110 417 aa, chain - ## HITS:1 COG:SPy1733 KEGG:ns NR:ns ## COG: SPy1733 COG1316 # Protein_GI_number: 15675582 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 371 1 380 424 382 58.0 1e-105 MKLGRKILLMLLAIFATTVVAVGIYLTTTYNYATGELSKTFRVSKATSGNSKAIQQTKPI TILLMGVDTGSEGRKETWEGNSDTMILVTVNPKTKRTTMTSLERDLLTDVEGSGEVKLNA AYAEGGADLAISTIQKVLDIDIDYYALINMQGMIDLVDAVGGIEVTNHFDFPISIAENEP EFQAKVEPGTHKINGEQALVYSRMRYDDPDGDYGRQKRQREVIQKIVAKLLKMGSIGSYK KILSAVSSNVQTSIDLGDSTTLRGLMGYSEAFKNIKSYQLAGSDATINGGSYQVASTEDI LKVQNRIKKEVGKKEVSESKLKTSLVLNGFGTSSYGSDDFVNSKGSLTLSEVSGSYESGS SEAVGGGSVSTYNGGATYSNNYSDNVGNYVQDQGATAPTYNYNGSGVTTYSTIPAAQ >gi|311101897|gb|AEKO01000003.1| GENE 10 9222 - 9815 221 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228000081|ref|ZP_04047083.1| acetyltransferase, ribosomal protein N-acetylase [Brachyspira murdochii DSM 12563] # 32 196 4 166 166 89 32 4e-17 MVMDVNCFWNLLVLEVKKSRRRWQMAEYELVIEEAQRDDSVSLAKLLKTVALESDFLAQD ARSSVLNAEQLASYIDSRQSVPNEICLVAKLNHEVIGVCNVTSDQDTKTSHIGDVFIAVA KPYWGNGIGQFLMEIMIDWANNTPAICRLELTVQARNERAVHLYQKFGFDIEGTKKRGAR TKNGEFLDVYLMAKLID >gi|311101897|gb|AEKO01000003.1| GENE 11 9736 - 10179 301 147 aa, chain - ## HITS:1 COG:SP1944 KEGG:ns NR:ns ## COG: SP1944 COG0802 # Protein_GI_number: 15901768 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Streptococcus pneumoniae TIGR4 # 2 147 1 146 147 172 60.0 2e-43 MIYSQNEEELISIGRKLGRLLNSGDIIVLSGDLGAGKTTLTKGIAKGLDVSQMIKSPTYT IVREYEGRSPLYHLDVYRIGDDPDSIDLDDFLYGDGVTIIEWGELLDDSLLGDYLLISIK HHGDGRQLLLESFGPRSEEIQEAMANG >gi|311101897|gb|AEKO01000003.1| GENE 12 10468 - 11889 1805 473 aa, chain - ## HITS:1 COG:SP0287 KEGG:ns NR:ns ## COG: SP0287 COG2252 # Protein_GI_number: 15900221 # Func_class: R General function prediction only # Function: Permeases # Organism: Streptococcus pneumoniae TIGR4 # 1 472 19 490 490 626 77.0 1e-179 MEKFFKLKEHGTDVRTEVTAGLTTFFAMSYILFVNPSMLAQTGMPAQGVFLATIIGAVAG TLMMAFYANLPYAQAPGMGLNAFFTYTVVFSLGYTWQEALAMVFLCGVISLIITVTKVRK MIIESIPTALKSAISAGIGIFLAYVGIKNAGFLKFAIDPGTYTVSGKGADMAQASITASS AATPGLVAFNNPTVIVGLIGLAVAIFFIVKGIRGGVLLSIVVTTVIAIFAGVVDLGSIDW HAASLTASIKDLGQVFGVALGSKGLGSLFSDVSRLPGVFMAILAFSLTDIFDTIGTLIGT GEKVGIIASTGDNNESKALDRALYSDLVGTSIGAIAGTSNVTTYIESAAGIGAGGRTGLT ALVVAALFAISSFFSPLVSIVPSAATAPILIIVGVMMLSNLKGVDWEDLSEAIPAFFTSI FMGFSYSITYGIAAGFLTYTLVKIIKGQAKDVHLVMWILDILFILNFISMAVL >gi|311101897|gb|AEKO01000003.1| GENE 13 12096 - 12908 922 270 aa, chain + ## HITS:1 COG:SPy1737 KEGG:ns NR:ns ## COG: SPy1737 COG0561 # Protein_GI_number: 15675586 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 270 1 270 270 369 67.0 1e-102 MTKKLIALDLDGTLLRPDGTISEFTKTTIKDVQNKGHQVVIATGRPYRMAIDHYKTLDLE TPLITFNGSLTNLPDREWAYEHSVKLDKKYLVNLLQRHDELEMDFLASEYRKHFYITMEH PERIQPQLFGVDKIIEAMRLEPAKITRNPNALLMQTRHEDKYQLARDIKKDFKEEIEVDS WGGPLNILEFSPKGINKAYALNYLLKAMRKSPDDLIAFGDEHNDTEMLELAKTGYAMKNA SSVLLPHANEQIKWTNEEDGVARKLQELLL >gi|311101897|gb|AEKO01000003.1| GENE 14 12953 - 13684 854 243 aa, chain - ## HITS:1 COG:SA0343 KEGG:ns NR:ns ## COG: SA0343 COG1878 # Protein_GI_number: 15926056 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Staphylococcus aureus N315 # 9 243 11 247 250 244 54.0 2e-64 MSDLLSIYNELQTKKWVDLTHKINAESPHFPALPALKQEDLFTLKDGFHVQKFTVVGQYG THIDAPIHFVEGGRWLDEIDLKDLLLPLYVIDKSKEVAANPNFILSKQDILDFEAEHRQI TEGAFVAFRSDWSKRWPSQDAMRNLDDNGVQQSPGWGREALEFLIHERHVKAVGHETFDT DAGIPAAEHGLVNEYYLLDQDIYQVEVLNQLDQVPAVGALISIAFPHWDKATGSPVRAVA ILP >gi|311101897|gb|AEKO01000003.1| GENE 15 14053 - 15060 1213 335 aa, chain + ## HITS:1 COG:SPy1738_1 KEGG:ns NR:ns ## COG: SPy1738_1 COG2893 # Protein_GI_number: 15675587 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 1 169 1 169 169 260 76.0 2e-69 MGIGIIIASHGKFAEGIHQSGSMIFGEQEKVQVVTFMPNEGPDDLYAHFNDAIAQFDTDD EILVLADLWSGSPFNQASRIKEENPDRKMVIVTGLNLPMLIQAYTERMVAPDAGVEEVVA NIYKETKEGVKVLPEGLIPEEDTKSADTKSSIPKGSIPEGTVLGDGKIKYVLARVDTRLL HGQVATGWTHSTHPDRIIVVSDTVCHDKLRTNMIKQAAPSGVQVHVIPIKNMVKANNDPR FGDTRAMLLFESVEDALAAVKAGVDVTEINLGSSAYKEGKVNVTKALSFDQTDVDAIKEL QSLGVKFDVRGVPSDSPTNVDALIKSAETKLAEKK >gi|311101897|gb|AEKO01000003.1| GENE 16 15078 - 15878 1052 266 aa, chain + ## HITS:1 COG:SP0283 KEGG:ns NR:ns ## COG: SP0283 COG3715 # Protein_GI_number: 15900217 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 1 266 1 267 267 233 58.0 3e-61 MSLVQIILVVIVAFIIGCSSVNDQIETYQPVVACSLIGLVTGHLELGVMLGGSLQLITMG WANVGAAMAPDASLAAVASTIILILGGQGAKGIGPAIALAVPLAVAGLALTMFVRTATVF IAHAMDSRAEAADIAGIERWHFIGMALQGLRVAIPALLLLLIPAHIVQTGLEAMPEWLTS GMTIGGGMVVAVGYAMVINMMSSREVWPFFFLGFALAALKELTLISLGVIGLCLAVMYLA LEASGSNGSSNDGGSGDPLGEILEDF >gi|311101897|gb|AEKO01000003.1| GENE 17 15894 - 16808 1064 304 aa, chain + ## HITS:1 COG:CAP0068 KEGG:ns NR:ns ## COG: CAP0068 COG3716 # Protein_GI_number: 15004772 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 4 304 3 303 303 400 64.0 1e-111 MADSKIKLTKADRFKAFLRSYFLLASFNYERMQNGGVAYTLIPAIKKLYQSKEERAAALK RHLEFFNTQPFMANPIFGVTLALEEERANGADIDDAAISGVKVGMMGPLAGAGDPLFWFT LRPIFLSLGAGLAVSGNIMGPIVFFVLWNVMVAAVKWYTQEFGYRAGTAITDDLSGNLLQ QVTRGASMMGMFVIGSLIQRWVSITFTPVVSTVKQQDEAFIHWDKLPKGIAGVKEAFLQQ AAGKSLEANKVTTLQDNLNQLIPGLAALGLTFLCMYLLKRKVSPIIIILGIFVLAILLHI IGLL >gi|311101897|gb|AEKO01000003.1| GENE 18 16821 - 17207 411 128 aa, chain + ## HITS:1 COG:CAP0069 KEGG:ns NR:ns ## COG: CAP0069 COG4687 # Protein_GI_number: 15004773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 122 12 133 135 97 42.0 8e-21 MVKSLNMEMAHTTKGTWFREGPIYGNIMVGDKAFEFYNDTKLQDYIQIPWDEITYVIADV YFGGKVIPRFEIRTKQNGRFRFASRKSRTTLKEIQKRIPRESLRKAPSFLVVLKQGFKNL FRHIVKKN >gi|311101897|gb|AEKO01000003.1| GENE 19 17470 - 18462 1415 330 aa, chain + ## HITS:1 COG:SPy1738_1 KEGG:ns NR:ns ## COG: SPy1738_1 COG2893 # Protein_GI_number: 15675587 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 1 169 1 169 169 280 85.0 3e-75 MGIGIIIASHGKFAEGIHQSGSMIFGDQEKVQVVTFMPSEGPDDLYAHFNDAIAQFDADD EILVLADLWSGSPFNQASRIAGENPDRKIAIITGLNLPMLIQAYTERMMDANATAEQVAG NIIKEAKGGIKALPEELNPAEETTAAPQEAAAPQGAIPEGTVIGDGKLKINLARLDTRLL HGQVATNWTPASKADRIIVASDDVAKDELRKELIKQAAPNGVKANVVPIQKLIDASKDPR FGNTHALILFETVQDALRAIEGGVPIKELNVGSMAHSTGKTMVNNVLSMDKDDVACFEKL RDLGVEFDVRKVPNDSKKDLFDLIKKANVQ >gi|311101897|gb|AEKO01000003.1| GENE 20 18530 - 19345 1168 271 aa, chain + ## HITS:1 COG:SPy1739 KEGG:ns NR:ns ## COG: SPy1739 COG3715 # Protein_GI_number: 15675588 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Streptococcus pyogenes M1 GAS # 1 271 1 269 269 298 77.0 8e-81 MSDMSIISAILVVVVAFLAGLEGILDQFQFHQPLVACTLIGAATGNLTAGIMLGGSLQMI ALAWANIGAAVAPDAALASVAAAIILVKGGNFTTEGIGVATATAIPLAVAGLFLTMLVRT ASVALVHAADKAAEHGNIAGVERAHYLALLLQGLRIAVPAALLLAIPAQSVQHALGLMPD WLNHGMVVGGGMVVAVGYAMVINMMATREVWPFFAIGFAFAAISQLTLIALGAIGVAIAF IYLNLSKQGGGNGGGTSSGSGDPIGDILEDY >gi|311101897|gb|AEKO01000003.1| GENE 21 19360 - 20271 1110 303 aa, chain + ## HITS:1 COG:SPy1740 KEGG:ns NR:ns ## COG: SPy1740 COG3716 # Protein_GI_number: 15675589 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pyogenes M1 GAS # 1 303 1 303 303 478 79.0 1e-135 MAEKIQLSQADRKKVWWRSQFLQGSWNYERMQNLGWAYSLIPAIKKLYTNKEDQAAALKR HLEFFNTHPYVAAPIMGVTLALEEEKANGTEIEDAAIQGVKIGMMGPLAGIGDPVFWFTV RPILGALGASLAQAGNIAGPLIFFIGWNLIRMAFLWYTQELGYKAGSEITKDMSGGILKD ITKGASILGMFILAVLVERWVSIVFTVNLPGKVLSKGAYIEWPKGNVTGDQLKTILGQAN DKLSFDKIQVDTLQKQLDSLIPGLMGLLLTFACMWLLKKKVSPITIIIGLFVVGIVASFF GIM >gi|311101897|gb|AEKO01000003.1| GENE 22 20350 - 20724 367 124 aa, chain + ## HITS:1 COG:SP0412 KEGG:ns NR:ns ## COG: SP0412 COG4687 # Protein_GI_number: 15900331 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 123 1 123 123 191 78.0 4e-49 MAQSLNKTVELHTTGVSYMAIGGKVGKFLIGDVALEFYPDVNVEQYIQIPWTSITQIGAN VSGKRISRHFEILTDKSKFLFASKDSGKILKIAREHLGNEKVVKLPTLIQTIGARIKGLF AKKS >gi|311101897|gb|AEKO01000003.1| GENE 23 20934 - 22211 1494 425 aa, chain + ## HITS:1 COG:SPy1742 KEGG:ns NR:ns ## COG: SPy1742 COG0172 # Protein_GI_number: 15675591 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 425 1 425 425 736 84.0 0 MLDVKRIRNDFDALSEKLATRGVVAETLNELKELDVKRRELLIKSEELKAQRNIASDGIA QAKRNKEDASEQIAAMQKVSAEIKEIDSELAAIDEKLNNIVVTLPNTPHETVPVGTDEDE NVEVRRWGTPRDFDFEIKPHWDLGEDLGILDWERGAKVTGSRFLFYKGLGAKLERAIYNF MLDEHAKEGYTEMITPYMVNHDSMFGTGQYPKFKEDTFELDGTDYVLIPTAEVPLTNYYR GEILDGKELPIYFTAMSPSFRSEAGSAGRDTRGLIRLHQFHKVEMVKFSKPESSYDELEK MVVNAENILQKLNLPYRVITLCTGDMGFSAAKTYDLEVWIPAQNTYREISSCSNTEDFQA RRAQIRYRDEADGKVKLLHTLNGSGLAVGRTVAAILENYQNEDGSVTIPEVLRPYMGGAE VISPK >gi|311101897|gb|AEKO01000003.1| GENE 24 22513 - 23067 435 184 aa, chain - ## HITS:1 COG:BS_yrdC KEGG:ns NR:ns ## COG: BS_yrdC COG1335 # Protein_GI_number: 16079729 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Bacillus subtilis # 2 183 5 187 187 181 47.0 8e-46 MQGLLMIDMQKAFDNSSWGERNNPQLEVNSQKLLNFFREKGWPVLHVQHVSENTQSRFHV SQGQDFKDGFQPCPGEPVFQKIVNSAFIGTNLESYLRDKKIDKLVIAGLTLPHCVSTTTR MAANLGFKTLLISDATASFALPNLDGHLIDPEVLHTINLVSLHGEFAQVMTTEEFMGGMI MIHK >gi|311101897|gb|AEKO01000003.1| GENE 25 23087 - 23734 648 215 aa, chain - ## HITS:1 COG:no KEGG:SMU.1919 NR:ns ## KEGG: SMU.1919 # Name: sapR2 # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 1 207 1 207 208 268 62.0 1e-70 MLENIQAYLSKQGVKYIKPEKAGPHQEEMEALKNLGQAARKEMQTLAKRLEERLDPMKMD RVSNWANQAQICRPHFWCYYREPEDSLDDVAMAIRLYGQAEDWGISVEVSFVERKKSDTT LAKQHKVLDLPITSPLYYLAQEDGDSHRVEGTEANRHMFKKAVKDGRVRKVLVKYDVPVT DSLTIDDLLDQLMEGFQLLRPYYDSCQDANKLLED >gi|311101897|gb|AEKO01000003.1| GENE 26 23799 - 25109 1739 436 aa, chain - ## HITS:1 COG:SPy0341 KEGG:ns NR:ns ## COG: SPy0341 COG1160 # Protein_GI_number: 15674498 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 436 1 436 436 787 91.0 0 MTLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGG IDDVDAPFMEQIKHQADIAMTEADVIVFVVSGKEGVTDADEYVARILYKTNKPVILAVNK VDNPEMRADIYDFYSLGLGDPYPVSSVHGIGTGDVLDAIVENLPTEVEEENPDIIRFSLI GRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSDGQEYTMIDTAGMRKSGKVY ENTEKYSVMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTIK KDNHTVSNWEADIRDQFQFLSYAPIIFVSAETKQRLNKLPEMIKRISESQNRRISSAVLN DVIMDAIAINPTPTDKGKRLKIFYGTQVSVKPPTFVVFVNEEELMHFSYMRFLENQIRQA FGFEGTPIHLIARKRK >gi|311101897|gb|AEKO01000003.1| GENE 27 25215 - 26117 863 300 aa, chain - ## HITS:1 COG:SPy0340 KEGG:ns NR:ns ## COG: SPy0340 COG1484 # Protein_GI_number: 15674497 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 300 300 392 64.0 1e-109 MERVGQTLNRTGHHGSGNATDLMKQILADPRVASFIQEHGLSQDQIKRSLPKFNQFLVEC RKVKEGDVTYIAKGYEPILTMNEGYADVTYKETRQLKEQQEQQAISKRINLLSLPQSYRK ITFADIALDDVARVDTFEILVDFVANYPSPDQKGLYIYGDMGVGKSFMLAAMAHELSETK KVATTIIHYPSFAIDVRNGIKDNSVKEQIDAVKEAEVLVLDDIGAEQFSSWIRDDVLQVI LQYRMIEELPTFFTSNYSFADLEAKLSNGRQGDETWQAKRVMERIRFLAKEVHLKGVNRR >gi|311101897|gb|AEKO01000003.1| GENE 28 26121 - 27296 921 391 aa, chain - ## HITS:1 COG:SPy0339 KEGG:ns NR:ns ## COG: SPy0339 COG3611 # Protein_GI_number: 15674496 # Func_class: L Replication, recombination and repair # Function: Replication initiation/membrane attachment protein # Organism: Streptococcus pyogenes M1 GAS # 1 387 2 384 391 303 41.0 5e-82 MRPIEEFVYVGNQVIVPDQASLMRCYYPIIGSEGYALYQYFLAFYDNGNHRHKFAAILNH LNFGMQPLQESLAVLTAVDLLAFYQSPQGFYVVELKSPLSIEQFLKHAVYSSLLEQKIGE PAVDALKPTSLHGLQDLSKRFSDVFTDERLAQKSVSEIKPKNSFDLSSFRNRMQADGLVF TDEKTDVPEIYKLSETYDMNWYDTYLLAKKTAVNHQIIVKRMQVQLEQAQAQKLGGNSAL TETEQKILKAVKSEKPVDYLQSAKGPGGTVTNSEKKILTDLAQRGFMDEVINLMVAYSLG RTRSTNVNREYISKLANDFAFKKIVTAEQGLLALRSGYDKKSQRAKDDSKRKTNVPSWSD PDYDNQTSQADQAKLDEIRRRALAKLEKGKE >gi|311101897|gb|AEKO01000003.1| GENE 29 27293 - 27772 526 159 aa, chain - ## HITS:1 COG:SPy0338 KEGG:ns NR:ns ## COG: SPy0338 COG1327 # Protein_GI_number: 15674495 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Streptococcus pyogenes M1 GAS # 1 156 1 156 164 212 76.0 2e-55 MRCPKCQHNKSNVIDSRQAEDGNTIRRRRECDACHARFTTFERVEEVPLLVVKKDGTREQ FSRDKIFNGILMSAQKRPVSSEDIENAITRIEQNIRRNHDGEVDSEVIGNLVMKELADLD EITYVRFASVYRSFKDVDEIEKLLQEITKTVRAKKESKK >gi|311101897|gb|AEKO01000003.1| GENE 30 27894 - 29411 1141 505 aa, chain - ## HITS:1 COG:SPy0337 KEGG:ns NR:ns ## COG: SPy0337 COG0642 # Protein_GI_number: 15674494 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 9 499 14 500 500 397 45.0 1e-110 MSKLFGKVTIRKKLTITAAVVFFIVLSMFTLVVVLSANTLLLQRERQNVNNTISKVVTYI EKDWDSDEELSPEPLLAALYSPKDIYGSMINGVLSEKHSLDGQVAVSNKLYSNQSVYVYD KKGTFIFTSEEDTDSPPGMSEVNKLKSVSYKGKRGFLLQVPIYGKDKKTIVGYAQVFHDL EFYYALKKRLIFLLIFLEVGITVLVIAVTVVVLTSILRPMRQLHETMGIITDSPSDLELR SKIESHDEIGDLAVNFNRMMDKIQENNQMQMRFLSDVSHELRTPIAVIKGHMDLLQRWGK NDPEILEESLEAASHEANRMTIMINDMLDSIRVKGSFDNHRNDTCDLNSSIRTVIGNFRV LHEDYQFYLNDFESSERPAQIYSQHFEQVITILIDNAVKYSPVNKEIQVTIKALEDEMLV QVQDNGEGISKEDIEHIFERFYRSDKARNRTTTQSGVGIGLSILYQIVEAYRCHIDVSSE LGVGTRFDLYIPFAGSETTTPQLED >gi|311101897|gb|AEKO01000003.1| GENE 31 29408 - 30097 799 229 aa, chain - ## HITS:1 COG:L0131 KEGG:ns NR:ns ## COG: L0131 COG0745 # Protein_GI_number: 15673576 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Lactococcus lactis # 2 229 3 229 230 268 65.0 4e-72 MSKRILIVEDERNLARFVSLELQHEGYDVVTADNGREGLEMALEKDFDLILLDLMLPEMD GFEVTRRLQQEKNTYIMMMTARDLIMDIVAGLDRGADDYIVKPFAIEELLARIRATFRRQ DIEATKNAPSKASTYRDLKLDVQNRAVVRGDEAIPLTKREFDLLNTLLSNMNQVMTREEL LLQVWKYDDVIETNVVDVYIRYLRGKIDIPGKESYIQTVRGMGYVIREK >gi|311101897|gb|AEKO01000003.1| GENE 32 30254 - 30790 679 178 aa, chain - ## HITS:1 COG:SPy0334 KEGG:ns NR:ns ## COG: SPy0334 COG1399 # Protein_GI_number: 15674493 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 177 2 178 178 166 50.0 2e-41 MIYLSEVRKSPEGLAFNEAPSLLESIKERYDQVLNLEQLQVSGHVVYDNGLYLLDYQLSY DITLPSSRSLEPTTLGFNYPVSETFIQEADAALQKELVEENLVLILDGDTINLNESILDN ILLNIPLRVLTPEEESGQISLSGNDWEVLSEEDFEALKQEKKEASNPFAQLNGLFDDN >gi|311101897|gb|AEKO01000003.1| GENE 33 31089 - 31802 694 237 aa, chain + ## HITS:1 COG:SPy0329 KEGG:ns NR:ns ## COG: SPy0329 COG0357 # Protein_GI_number: 15674490 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Streptococcus pyogenes M1 GAS # 1 237 1 237 237 364 76.0 1e-101 MTPEDFYKALKELGFDLSQKQKDQFQRYFELLVEWNEKINLTAITERDEVYLKHFYDSLA PVLQGHIKNQTIRLLDIGAGAGFPSLPMKILCPELDVTIIDSLNKRINFLNLLADELDLS GVHFYHGRAEDFGQDKAFRAQFDIVTARAVARMQVLSELTIPFLKVGGQLIALKATAADE ELANAKNALNLLFAKPVLNENYKLPNRDGRNITIVNKKKETPNKYPRRAGMPNKKPL >gi|311101897|gb|AEKO01000003.1| GENE 34 31850 - 33247 1005 465 aa, chain + ## HITS:1 COG:SPy0327 KEGG:ns NR:ns ## COG: SPy0327 COG0168 # Protein_GI_number: 15674489 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Streptococcus pyogenes M1 GAS # 7 448 9 450 463 497 64.0 1e-140 MITRRFSLINRLSVTQKLVLSFVFVIIVGSILLSLPISHYVNSPETSYLDHLFNTVSMVC VTGLSVVPVSKAYNGLGQILSMLLMQTGGLGLVSLVAFSTYTLKNKLGLSDQDLLQSALS RDSQKDLKSYLFKVYKITFSIEAMASLVIMTDFIPRFGLGHGIFNSLFLAVSAFCNAGFD NLGSNSLQDYATNPTINLAVAFLIMSGSLGFAVWIDLIQLMRRYIKDRPRNWKLAWRPFS NQSRLVLISTGCLLLGGTLLAWLLEMDNSKTIGTLNVWQQLLVSFFQTVTMRTAGFATIS YTNADFSTNLLFMIQMIIGGGPGGTAGGIKVTTASIMFLLFKSELSGNSSVVFRNRIISN KTILQAFTVILFFLTMLFVGYVILLETNPTLSPLGLLFESVSAIATVGVSMDLTPNLNTL GRFVIMALMFIGRVGPITVLLSLMTKKKNMFLMPQLTFQSAKLFY >gi|311101897|gb|AEKO01000003.1| GENE 35 33274 - 33945 636 223 aa, chain + ## HITS:1 COG:SPy0326 KEGG:ns NR:ns ## COG: SPy0326 COG0569 # Protein_GI_number: 15674488 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pyogenes M1 GAS # 1 223 2 224 224 244 54.0 6e-65 MKTQIIGVLGLGIFGQTIATELSSFGQDVIALDNNSTTIDSLADQVTKAAVGDITDIEFL RSAGIDTCDSVIIATGEHLESSALALLQCKKLGITNIIAKATNNNYEEVLYGMGANWVIT PERSTAKELASNILRYNISNVFHLEDDVALIELKIPNEWAGKSLHTLNLRQTYNVNVIGF RDEENGRLNTHFDPTNKLPTEGIILVVADNRTLEKFDYLGYLK >gi|311101897|gb|AEKO01000003.1| GENE 36 33881 - 34132 59 83 aa, chain - ## HITS:1 COG:SP2031 KEGG:ns NR:ns ## COG: SP2031 COG2220 # Protein_GI_number: 15901852 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Streptococcus pneumoniae TIGR4 # 1 57 209 269 363 84 62.0 7e-17 MSNEERVPRAVNDVFETLGGPIYHGADCHFSNYFAKHGKDFDIEVAINNYLGIQEMLVYL SHFISNILNNRIFLVFDCQRLLE >gi|311101897|gb|AEKO01000003.1| GENE 37 34185 - 36161 2420 658 aa, chain - ## HITS:1 COG:SP2030 KEGG:ns NR:ns ## COG: SP2030 COG0021 # Protein_GI_number: 15901851 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Streptococcus pneumoniae TIGR4 # 1 657 1 657 658 1095 80.0 0 MSNLSVNAIRFLGVDAINQANSGHPGVVMGAAPMGYTLFTKQIHVNPEVPNWINRDRFVL SAGHGSMLLYALLHLSGFKDLSIEELKQFRQWGSKTPGHPEFGHTVGVDATSGPLGQGIA TAVGMAQAERFLASRYNKEGFPIFDHYTYVIAGDGCFMEGVSGEASSYAGLQKLDKLIVL YDSNDINLDGETKDSFTEDVRARYEAYGWNTEFVQDGTDVEAINAAIESAKASGKPSLIE VKTVIGHGAPNKQGTNGVHGAPLGPDETAAARENLGWNYAPFEVPKEVYADFKENTVDRG RQAYDAWIALVDEYKQSYPELGAELERILEGKDAVEFQDSDFPALENGYSQATRNSSQDA LNVIADKVPTFLGGSADLAHSNMTYIKSDGLQDDAHRLNRNIQFGVREFTMGTVLNGMSL HGGLRVYGGTFFVFSDYVKAAVRLSALQGLPVTYVFTHDSIAVGEDGPTHEPIEHLAGLR AIPNLNVYRPADARETQAAWYQAVTSKSTPTALVLTRQNLTVEEGTDFDKVSKGAYVVHE TAADFDTILLASGSEVNLAVASAKALESEGYKVRVVSIPSTDVFDAQDQAYKEEVLPNAV RRRVAIEMAASLPWYKYVGLDGAVIGIDTFGASAPAAKIIEEYGFTVENVVGTVKGMN >gi|311101897|gb|AEKO01000003.1| GENE 38 36371 - 37201 1099 276 aa, chain - ## HITS:1 COG:SP0484 KEGG:ns NR:ns ## COG: SP0484 COG0619 # Protein_GI_number: 15900399 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 275 1 275 276 318 61.0 5e-87 MSNRLIGYQPGRGFLYDLSGASKMLFFILVSVACMATYDPRFILAVGLLSIYLFNLANIC WRDISFVVKIIGSIALFNLLMVYLFAPSYGEEIYGAKTVLIEGWGRFYLTSQELFYLANL LLKYFSTVPLAILFLMTTHPSQFAASLNQIGIPYKFAYSVSLTLRYIPDIQEEFFTIRKA QEARGLDLSQKAGLVKRIRGNLQIVLPLIFSSLERIDTVSTAMELRRFGQYKKRTWYVHK SLTKQDYLVIVSATLLLGISLELIYLNHGRFYNPWI >gi|311101897|gb|AEKO01000003.1| GENE 39 37194 - 38870 249 558 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 296 518 12 233 318 100 29 2e-20 MDKYISFNHFTFQYDAQAEATLKDISFDIAKGEKVLILGPSGSGKSTLAQCLNGIIPNIH KGQAKGQVRIDGQDIFKQSIYDKSQSVSTVLQDPDGQFIGLTVAEDLAFALENDCADQSE MKDKVALWAERLDLTSLLNHRPQDLSGGQKQRVSLAGVLIDESPILLFDEPLANLDPKSG QGTIDLIDKIHEEVGATTIIIEHRLEDVLYRPVDRILLVNKGELLFNGRPDELLSSTLLL ENGIRDPLYLTVLRQLGFDTTRAQNLSQLDALDLSGLDIPDSVLRDKTETSTDSILKVEG LSVSYGDNPAVIEDMSFSLKKGERLAIVGKNGAGKSTLAKALCGFVPSQGKLIYKGRDIS QDSIAERSERIGFVLQNPNQMISQTMIFDEVALGLRLRGIEETEVEERVHEVLKTCGLYS FRKWPISALSFGQKKRVTIASILVLKPEIIILDEPTAGQDYKTYTDIMNFLDSLQKQGHT IVMITHDMQLMLEYSDRCIVVLEGKIIADDNPVTILNQKDLLESANLKQTSLYSLGQKLL CDPVKVTQYYIEKGGPYV >gi|311101897|gb|AEKO01000003.1| GENE 40 38936 - 39481 627 181 aa, chain - ## HITS:1 COG:L123147 KEGG:ns NR:ns ## COG: L123147 COG4720 # Protein_GI_number: 15672306 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 181 1 182 182 166 53.0 2e-41 MKNNSIRTVVATGIGAALFIIIGMFVNIPIFGNTSIQLQYAVQALFSVIYGPITGFFMGF IGHALKDGIQYGNISWAWVLASAITGLVIGLFNKKYDVTTGKFSLMSMIWFNLAQALALL IAYGIVTPIGDRLQFAQAWSYLYAQSFVAGVANFITIAIGGTLLLAIYARSRTQSGSLTK D >gi|311101897|gb|AEKO01000003.1| GENE 41 39491 - 40339 863 282 aa, chain - ## HITS:1 COG:SP0481 KEGG:ns NR:ns ## COG: SP0481 COG1912 # Protein_GI_number: 15900396 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 280 10 289 291 482 84.0 1e-136 MTNNLLVLQSDFGLVDGAVSAMIGVALQEEPSLGVHHLTHDITPYNTFEASYRLFQTVEY WPEGTTFVSVVDPGVGSSRKSVVALTKTGQYIVTPDNGTLSYIKKVVGIVAVREISEVEN RRSNTELSYTFHGRDVYAYTGAKLASGHISFEEVGPELPVDKILELPVVETTIEDNLVRG AIDILDVRFGSLWTSITRDDFYALEPNFGDRFEVTIFNNDMLVYQNQVTYGKSFADVRIG QPIIYINSLYRVGLAINQGSFAKAYNVGVGSNWHIEIKRLGD >gi|311101897|gb|AEKO01000003.1| GENE 42 40493 - 41701 1337 402 aa, chain - ## HITS:1 COG:SPy0324 KEGG:ns NR:ns ## COG: SPy0324 COG3633 # Protein_GI_number: 15674487 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Streptococcus pyogenes M1 GAS # 1 401 1 401 404 486 70.0 1e-137 MKRFISTWNRTSLIKRIAIGVVVGAVLGLLIPKFTVIGLLGDMFVGGLKAIAPLLVFALV ANALSQTREGQQSNMKTVIVLYLFGTFAAALTAVISHYIFPISLKLGAAAATKATAPQGV GEVFKDLLLKMVDNPVNALAQANYIGVLVWAVVFGFAMRTASNHTKDLLNTLAEVTSQIV RWIINLAPFGILGLVFNTISENGVGVLADYGVLILVLVGTMAFVALVVNPIIAFMMMGKN PFPLVFRCLKDSGITAFFTRSSAANIPVNLQLCEDLGLNPDTYSVSIPLGSTINMAGAAV TINVLTLAAVTTLGIEVDFATALILSVVSAISACGASGIAGGSLLLVPVACSLFGISNDL AMQVVGVGFIVGVIQDSCETALNSSTDVLFTAVAEKSRWKKS >gi|311101897|gb|AEKO01000003.1| GENE 43 41824 - 42516 803 230 aa, chain - ## HITS:1 COG:SP0152 KEGG:ns NR:ns ## COG: SP0152 COG2011 # Protein_GI_number: 15900090 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 230 1 230 230 239 69.0 2e-63 MADWIQQNFPDIYRIGMQGVNSWPDAIYATLYMTVISFIIGGLLGLVMGLFLVLTGPRGV IENKFIFQILDKITSIFRAIPFIILLAILKGFTYFIVGTNLGMTAALVPLSAATFPFFAR QVQVVLADLDRGVIEAAQASGASLWDTIKVYLGEGLPELVRVSTVTLISLVGETAMAGAI GAGGLGYIAIYYGYNRSSTSVTILATFLILILIFLVQFLGDFLTRKLSHK >gi|311101897|gb|AEKO01000003.1| GENE 44 42516 - 43583 1410 355 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 354 1 354 354 484 72.0 1e-136 MSNVIIDLKNIDITFTQKRRTIQAVKDVSIQIEKGDIYGIVGYSGAGKSTLVRAINLLQV PTAGKITVGKDVTFADGKVQLSTKELRQKRQTIGMIFQHFNLMSQKTAYENVAFALRHSK LSNEEKDKKIRSLLELVDLTDRAENYPAQLSGGQKQRVAIARALANDPEILISDESTSAL DPKTTKQILSLLQDLNKKLGLTVVMITHEMQIVKDICNRVAVMQNGQLLEEGSVLNIFSN PQEDLTQEFIETAAGIEDALAKINAQPLVRNLPASALLVQLKYVGSSTDEPLLTEIFKDY GVSSNILYGNVEILGDTPVGELVVVLDGEADKVLAAQKAIENAGVSLQVLKKGAQ >gi|311101897|gb|AEKO01000003.1| GENE 45 43576 - 44949 1414 457 aa, chain - ## HITS:1 COG:SP0150 KEGG:ns NR:ns ## COG: SP0150 COG0624 # Protein_GI_number: 15900088 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Streptococcus pneumoniae TIGR4 # 1 457 1 457 457 661 69.0 0 MAFSSEEEQLRKFRNDEIAQHYFEVLRTLISKKSIFAQNIGLYDVAAYLGEIFSSVGAEV TIDETHTAPFVLAKFKSSNPDAKTIIFYQHYDTVPADNDQPWTDDPFCLTVRKGYMYGRG VDDDKGHITARLTALRKYIREVGDLPVNITFMMEGAEESASTDLEKYLEKYRDDLLPADL LVWEQGNRNSKGQLEITGGNKGIITFDLSVESADVDIHSKFGAVIESASWYLLNAISSMR DDQGRILIDGIYEKIIQPNEREMDLIETYAIENADSLRKIYGLKLPILESDRRAFLKTYY FETALSIEGISTGYQGQGVKTILPAQAKAKMEMRLVPGLTPEYVLDCIKAHLKKEGFDRI KVTFTLGEESYRSDMSDPAIVNVIELAKGFYEEGVAVLPTAAGTGPMHMIHQALGVPMAA FGIGNANSRDHGGDENVSLADYYTHIELIKELIASYE >gi|311101897|gb|AEKO01000003.1| GENE 46 45010 - 45912 1076 300 aa, chain - ## HITS:1 COG:SPy0319 KEGG:ns NR:ns ## COG: SPy0319 COG1464 # Protein_GI_number: 15674483 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Streptococcus pyogenes M1 GAS # 1 285 1 281 281 287 59.0 2e-77 MKFKKILGITGLAVASTVALAACGAGGNKSAKDDKTLTVGIMTLDDTTEPLWDKVKELAK DKGVTIELKEFTDYNQPNEALKNGEIDVNAFQHIYFLNNWNKENKGDVVAAADTLLSPIH LFSGTENGKAKYKDVKELPEGATISVPNDGTNESRALTLLQTAGLIKLDVKDGELATIKN ISENPKKLEIKEIAAEQAAQTLSSVDAAVVNNSYAQQQNVDYDTTLFQEDPSQDLKDWVN IIAANKDWKKSNKADAIKTLIKAYQNDEVAQIIYDASNKVDLPAWKGAPTQDQLKANSKK >gi|311101897|gb|AEKO01000003.1| GENE 47 46072 - 46920 912 282 aa, chain - ## HITS:1 COG:SPy0317 KEGG:ns NR:ns ## COG: SPy0317 COG0834 # Protein_GI_number: 15674482 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 1 280 1 278 280 343 65.0 3e-94 MKLKKILGITGVAIASVALLAACSSKSSKEASKSSGGKETINFATVGTTAPFSYEENGEL TGYDVEVAKAVFKDSDKYEVKFQKTEWSSVFTGLDAAKYQMAGNNISYSEERDQKYLFSY PIGTTPAVLTVPKDSEIKKYDDIAGHSTQVVQGTSTATQLTEFNDKHSDKPVELNYTNEN ITQMLTNLNEGKYDFKIFDAPTVNAIIKNNKLSNLKTIELKSDQQPYIYFLFADNQKDLQ KFVNKRLEELQKDGTLAKLAEKFLGNKDYIPTKDALKVPSKK >gi|311101897|gb|AEKO01000003.1| GENE 48 47085 - 47801 182 238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 216 278 497 563 74 26 1e-12 MFQLKQVACAYEQKKVFTGLDLEIRQGQYVMLMGENGTGKSSLISLLTGFKQEESGRILF LGKDLKEWLKDKRQKRDFYSRLGILFQDVDSQLFNSTVYDEIAFGPRQLGLTEEEVSLRV QDTLSLLKIEDLRNRVPYQLSGGEKKKVAFASIMVTNPDVYILDEPFNNLSKEYEEFFRE LLHELHSAGKTIIMSAHHFKHLHHEKADVLLFEDGKADFFPAQEVLNNEQVIERLSHY >gi|311101897|gb|AEKO01000003.1| GENE 49 47803 - 48582 368 259 aa, chain - ## HITS:1 COG:CAC0772 KEGG:ns NR:ns ## COG: CAC0772 COG0619 # Protein_GI_number: 15894059 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 2 241 1 246 269 88 26.0 1e-17 MILPDWMSEERPVVTKVGRNNFLIRNRHHLEALLQKFETHPLKVASVFHPTAKVLLLFFL LISVGISQNLIVLWILALFLGAGVAFLPHSVLVRTLKKTVVLLIFPLVLYLPHLLLSGGQ SLFLFRLPLIAVAIAYYSETSTISEMLAALKGLHFPDLVLLQLDITIKYIDVFGKQLMDL LKGIEARSFGGNHRFRIGSNIWGMLYLKAIRYGEELTQAMEARCFVGEYVKSSQSFTWKD WLALISLVAVILGQILLGG >gi|311101897|gb|AEKO01000003.1| GENE 50 48579 - 49556 1015 325 aa, chain - ## HITS:1 COG:CAC0771 KEGG:ns NR:ns ## COG: CAC0771 COG0310 # Protein_GI_number: 15894058 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Clostridium acetobutylicum # 1 325 1 321 322 281 45.0 1e-75 MHIPENYLSPTTCAAMGAVMLPIWYKAVKEVKVKVDTDKKTIPMLGIGTSLSFLIMMFNL PAPGGTSAHAVGAVLIAILLGPWASCLAVSVALAMQALLFGDGGILAFGANAFCMAVVMP FVGYAVYKLLNKWTKNRIIASFFGGYIGIVAAALTVAVLLGIQPILFKDGSGNPLYNPYP LRVTLPVMGLTHLLIGLVEGFFTAGVQEFIERLNIDNTQELTTKKLRPLLLFILALIILT PLGLLATGTAFAEWDVKELVEKLSHYHVEAQAPKGMLNGFSFNALFPDYSIAGIPEVLGY ILSAASAVLIFFILYRLIFGRKVEK >gi|311101897|gb|AEKO01000003.1| GENE 51 49560 - 50399 777 279 aa, chain - ## HITS:1 COG:UU428 KEGG:ns NR:ns ## COG: UU428 COG0829 # Protein_GI_number: 13357991 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreH # Organism: Ureaplasma urealyticum # 44 274 54 286 287 139 34.0 4e-33 MTQAYDGFVHLGFSNRNGRTISHKKYQEGNSRVSADNSDANGVPYYFLINMGGGFVEGEQ YQVTIDVNKDAHALVTTQTPTYVYKCEKGQLTQQNTSITLEENSYLEYMADEVIPYLKSR YFQTSRIDMDKSAHLIYSDGVTAGWSHEDLPFQYHYFRNLTQIYQDNELVYSDQTLLEPQ KQDMFKLGYFEGWRNYNSLVMVSPAIDEAFVKALQKHLEDLNLESDFAISSLDIPGLVLR ILGKTAEDNRRVIYACTDYFRQEIHGLSTLNLRKNDMRR >gi|311101897|gb|AEKO01000003.1| GENE 52 50401 - 51015 664 204 aa, chain - ## HITS:1 COG:UU429 KEGG:ns NR:ns ## COG: UU429 COG0378 # Protein_GI_number: 13357992 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Ureaplasma urealyticum # 3 201 2 201 206 265 67.0 6e-71 MTKRTVIIGVGGPVGSGKTLLLERLTRRMSDLNLAVITNDIYTKEDALFLAKNSSLDEDR IIGVETGGCPHTAIREDASMNFEAIETLQERFNHDLDVIFLESGGDNLAATFSPDLVDFT IYIIDVAQGEKIPRKAGQGMIKSDLFLINKTDLAPYVGANLDRMREDTLHFRNEDSFIFT NLNNDDNVKEVEEWIRKNFLLEDL >gi|311101897|gb|AEKO01000003.1| GENE 53 51045 - 51758 698 237 aa, chain - ## HITS:1 COG:SA2086 KEGG:ns NR:ns ## COG: SA2086 COG0830 # Protein_GI_number: 15927872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Staphylococcus aureus N315 # 14 237 6 229 229 171 38.0 1e-42 MNINPFANVSLQDYLEIVQIVDSTFPIGSFNHSFGMENYLREDTVTDDKGYEEWQEAYLA SQFKYGEGLVIKLVYDAMATDNLEQVWHYDKVLTVSTQARETRQGTKMIAKQMLRLIQRL HAIPVLDDYQSKIQKGEVFGNPAIVFALYVFNKGLGCSEAIALYGYSVISTMVQNAVRAI PLGQFAGQEIVLRSFSQLEKMTQEIQELDASYLGANTPGLELAQMKHETQVFRLFMS >gi|311101897|gb|AEKO01000003.1| GENE 54 51748 - 52200 650 150 aa, chain - ## HITS:1 COG:SA2085 KEGG:ns NR:ns ## COG: SA2085 COG2371 # Protein_GI_number: 15927871 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreE # Organism: Staphylococcus aureus N315 # 19 143 21 145 150 93 40.0 1e-19 MIFTKVDALVKDIDVDKYHIETVILSSDDLNKKIIRVKSDHGNEFGIRLDKGQKLQNGSA FFIDDHHVLVIGVESQDLIVISPKDMDEMGITAHILGNTHKPIEVKDAKIYLEVDPVVEQ VLTQKEIAYTIEEVVLDKPLRHVNLTAHEH >gi|311101897|gb|AEKO01000003.1| GENE 55 52341 - 54059 2258 572 aa, chain - ## HITS:1 COG:BH0254 KEGG:ns NR:ns ## COG: BH0254 COG0804 # Protein_GI_number: 15612817 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) alpha subunit # Organism: Bacillus halodurans # 4 572 2 571 571 692 61.0 0 MSFKMDREEYAQHYGPTVGDSVRLGDTNLFAAIEKDFTVYGQESKFGGGKVLRDGMGVSA TETRDNPSVVDTIITGATIIDYTGIIKADIGIRDGKIVAIGRGGNPDTMDNVDFVVGAST EAIAAEGLIVTAGGIDLHVHYISADLPEFGLDNGITTLFGGGTGPADGSNATTCTPGKFH ITRMLQAVDDMPANFGFLAKGVGSETEVVEEQIKAGAAGIKTHEDWGATYAGIDNSLKVA DKYDVSFAVHTDSLNEGGFMENTLESFQGRTVHTFHTEGSGGGHAPDIMVFAGKENILPS STNPTNPYTTNAIGELLDMVMVCHHLDPKIPEDVSFAESRVRKQTVAAEDVLHDMGALSI MTSDAMAMGRVGEVAMRCWQLADKMKAQRGPLEGDSEFNDNNRIKRYVAKYTINPAITNG IADYIGSVEVGKFADLVIWEPAQFGAKPKLVLKGGMLTYGVMGDAGSSLPTPQPRIMRKL YGAYGQAVHETNLTFVSQYAYDHGIKEEIGLNKIVLPVKNTRNLTKRDMKLNDYAPKTIR IDPQTFDVFIDDELVTCEPIHTTSLSQRYFLF >gi|311101897|gb|AEKO01000003.1| GENE 56 54075 - 54386 459 103 aa, chain - ## HITS:1 COG:SMc01939 KEGG:ns NR:ns ## COG: SMc01939 COG0832 # Protein_GI_number: 15966226 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) beta subunit # Organism: Sinorhizobium meliloti # 1 102 1 101 101 123 62.0 9e-29 MIPGEYHVASEPIDYNGGYEAISIEVKNVGDRAAQVGSHYHFYEANEAGLQFDREKARGK RLDIPAGTAIRFEPGETKTVQLIDFGGKRRIFGFNNKVNGFLD >gi|311101897|gb|AEKO01000003.1| GENE 57 54399 - 54701 500 100 aa, chain - ## HITS:1 COG:Cgl0084 KEGG:ns NR:ns ## COG: Cgl0084 COG0831 # Protein_GI_number: 19551334 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) gamma subunit # Organism: Corynebacterium glutamicum # 1 100 1 100 100 124 68.0 3e-29 MQLTMREQEKMMISLAAMIAQRRKDKGIKLNHPEAVALITDYVLEGAREGKTVAQLMDEA RNLLTREDVMEGIAEMIPMIQVEATFTDSTKLVTVHDPIQ >gi|311101897|gb|AEKO01000003.1| GENE 58 54726 - 55241 536 171 aa, chain - ## HITS:1 COG:no KEGG:STER_0322 NR:ns ## KEGG: STER_0322 # Name: not_defined # Def: UreA transporter # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 171 1 171 171 274 95.0 7e-73 MLGVILLYVGMVLMSNGFHRLEGIPDKSNVVMNIFTGGLGLILNIIVIAYGACTGKGTDW FYGSATGLLFAFTYLYSAINTIFDFDQRLYGWFSLFVAINTIPAGILCLTSGYGGNAWYG IIWFLWGILWLTAFIEINLKKDLGKFVPYLAIFEGIITAWIPGLLMLWGKW >gi|311101897|gb|AEKO01000003.1| GENE 59 55996 - 56478 200 160 aa, chain + ## HITS:1 COG:no KEGG:stu0277 NR:ns ## KEGG: stu0277 # Name: not_defined # Def: urease cluster protein, truncated # Organism: S.thermophilus_LMG # Pathway: not_defined # 22 137 116 231 266 124 59.0 8e-28 MPSCWPISLLNGSHWTKQAKTVGVYGLSDIIHTSYIFPLKYFFLGVLTLFYKKTLNQELA EEVKREDQLYKRMILISIITALVLTVFVANQLSQVLPSFVQLWQQVFQTLASLLNFNINF ENSGLFISRLVTNLPLALGLFSKLVAVYLANDKPLSQKQF >gi|311101897|gb|AEKO01000003.1| GENE 60 56563 - 56811 306 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|3850213|gb|AAC72028.1| ## NR: gi|3850213|gb|AAC72028.1| ure cluster protein [Streptococcus salivarius] # 1 80 316 395 464 113 78.0 4e-24 MLTATSQMSELLSLNQANIPTYQASHIAVQDFWQLVRVSILNFAVLVGLYIFSKEDLFTH KGLRLISMLLFTFARLFALITD >gi|311101897|gb|AEKO01000003.1| GENE 61 57052 - 57384 310 110 aa, chain - ## HITS:1 COG:no KEGG:str0276 NR:ns ## KEGG: str0276 # Name: not_defined # Def: membrane protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 103 1 103 103 155 89.0 3e-37 MLEAYKNFWLGYLDFYGRTKRSDYWWVVLINGVIATLIFLLMDLLGETKAAGFTLTAFIL FIAATALPTISIQIRRLRDANFNVAWIVLKATPLTVALWVMYAFPTRNSK >gi|311101897|gb|AEKO01000003.1| GENE 62 57495 - 58670 226 391 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 171 383 2 223 245 91 32 1e-17 MTLTVVPLYVLIILAFYKLFEKENYQLMEANSQVNTAVIDDLRGIETLKSLRVEERRYQE IEVKFHDYLKKSLSKAKWQLTQDGLKTGVQLVFNVFILWYGAQLVMEGQLSSGQLITYNM LLNYFTTPLINIINLQSKIQQAKVANNRLQEVYVVNKEEKGQLKDLFFKQLDLKGVSHRF SYQQETLHNIDLTINKGEKIALMGQSGSGKTTLAKILSGYHTKSSGHVSLDKGSISQAEL RQLVTYVPQQTYVFTGTILENLLLGLEGEVDEQVILRACEQADILADIQKMPLGFQTQVS EDGGLSGGQKQRLAIARALLSKQPILIFDEATSGLDSDTESRVMANLAKIKRTMIFIAHR NSVRQHVSRVVTMVSGQIESDSPNFNPFQFI >gi|311101897|gb|AEKO01000003.1| GENE 63 58670 - 59590 858 306 aa, chain - ## HITS:1 COG:SP0042 KEGG:ns NR:ns ## COG: SP0042 COG2274 # Protein_GI_number: 15899987 # Func_class: V Defense mechanisms # Function: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain # Organism: Streptococcus pneumoniae TIGR4 # 3 306 5 308 717 342 57.0 6e-94 MSKYPYISQVDQRDCGVAALAMILKNYGSSYSLAYLRELAQTSREGTSALGLVEAAKQLG LETQAIRADLDLFKQENLSYPFIAHVVKDGGLQHYYTVFGQAKGQVVVGDPDPSTKVIKM SLEDFDKEWTGVALFFEPGKNYIKYKEKVPGLLSFLPILFRRKGLIAVIVLLSFLVTLVN IIGSYYLQSIIDRLIPQEDYALLTMISLGLCIAYIAQQVFTFFKDYLLHRLGNYLSIAVI LPYIKHVLSLPISFFSSRRTGEITSRFGDANTIIDALASTILSIFLDVTIVITLAVALIL QNRSLF >gi|311101897|gb|AEKO01000003.1| GENE 64 59759 - 60601 276 280 aa, chain - ## HITS:1 COG:SPy0037 KEGG:ns NR:ns ## COG: SPy0037 COG1396 # Protein_GI_number: 15674279 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 278 18 299 303 116 31.0 5e-26 MSREVLCLDGAELTVRQLIRIEKGESLPSLDKLSYIAKRLGKSMADLLDHDRIEIPDTYY EMKNRLIKFPTYGDKERVKQKLDLIEDVYNQFFDILPEEELLTLDILENILSFTSWEERP KVEEIYEDLFEQVKRKKKFSTNDLLVIDYYFYHLYGRKQYDKKIFDRIVDRVLKQNIPTD DAYNIALFNDLMAIAGLKISLESFKDFLTVIDKLLAVIEKSQFHSYKPGVYILEAKYELI HNGNKKKATENYDKAIMFASVLEDSVLEEKTRAEKAADGL >gi|311101897|gb|AEKO01000003.1| GENE 65 60814 - 61464 531 216 aa, chain - ## HITS:1 COG:SPy0374 KEGG:ns NR:ns ## COG: SPy0374 COG0671 # Protein_GI_number: 15674522 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 215 2 216 217 191 51.0 7e-49 MKHKHTHYICASFAFLLFVALGYMVKFYPEALTEFDSSIQTRVRGDLPGGLTHFFKTITI LGNTSVQAIIAIVAVIWLYLRQYKSEAIFVGTSGVLASIMIVSLKYIYQRPRPLITHLVH ASGYSFPSGHSLGTFMILGAIAIVLIQRLEKKESQVAVFAISGLLIALVGLSRIYVGVHF PTDVLAGFTLAFGLLNVIYPTYDRIRFEWRFQSKQK >gi|311101897|gb|AEKO01000003.1| GENE 66 61467 - 62024 645 185 aa, chain - ## HITS:1 COG:SP0488 KEGG:ns NR:ns ## COG: SP0488 COG3601 # Protein_GI_number: 15900402 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 182 1 182 187 166 64.0 2e-41 MTNTRKLAHIAILSAVSFLLLYFSFPLIPAADFLKVDFSILPVLIALVIFDFRSAIGVLL LRSLLKLLLNNGGPGSMIGLPMNFVALGVFVWGLSYFWKKNQTSKNYILGSVLGTVLLTV AMVVLNYIYAVPLYAKFANFDIAQFIGLYKYLFAMVVPFNLLEGLIFAVAFALIYAPLKS ILVKL >gi|311101897|gb|AEKO01000003.1| GENE 67 62068 - 62241 56 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLPMPKKPTQKDWSSSIQTILSVEELHLISLRSRTYPKNHRRSGVSPCPEDPLRIT >gi|311101897|gb|AEKO01000003.1| GENE 68 62334 - 62843 620 169 aa, chain - ## HITS:1 COG:SPy0371 KEGG:ns NR:ns ## COG: SPy0371 COG0219 # Protein_GI_number: 15674520 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Streptococcus pyogenes M1 GAS # 2 169 16 182 182 278 76.0 3e-75 MSRNHIVLFEPRIPQNTGNIARTCAATNSPLHIIRPMGFPIDDKKMKRAGLDYWDKLDIT YYDNLADFMSKNHAGRLHLVTKFADKTYSEEAYADGEDHYFMFGREDTGLPEDFMREHPE KAIRIPMNDEHVRSLNVSNTVCMIVYEALRQQQFVGLELSHRYQHDKLK >gi|311101897|gb|AEKO01000003.1| GENE 69 63131 - 64480 1251 449 aa, chain + ## HITS:1 COG:SP0480 KEGG:ns NR:ns ## COG: SP0480 COG0569 # Protein_GI_number: 15900395 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 449 449 592 66.0 1e-169 MRIIVVGAGKVGTALCRSLVGEKHDVILIEEKEEVLKRLSKRYDVMGFAGNGANFKILEQ AEVSNCDVFIAMTDKDEVNMISAVLAKQMGAKETIVRVRNPEYSNAYFKDKNFLGFSSVV NPELLTARYIANTVEFPNALSVETFANGRVILMAFKVTETSQLSGMTMEQFRKKFGNILV CTIDRQGDLIIPDGNATMQAGDKIYVTGKRVDMALFHSYIKPKSIKKLLLIGAGRISYYL LNILKNNRIKVKLIEHKMDRAQTFSQVFPEVSVILGDGTAKDLLLEESAASYDAVATLTG VDEENIITSMFLESIGIQKNITKVNRTSLLEIVDTRDTTTIVTPKSIAVDTVMHFIRGRY NAKDSSLDALHHVANGRIETLQFQIKENNKIAGKKLSELNFAHGVLIAAIIRNGKAIFPT GEDTLAIGDKIVVVTLLQNVTHIYDLLKR >gi|311101897|gb|AEKO01000003.1| GENE 70 64487 - 65926 1436 479 aa, chain + ## HITS:1 COG:SP0479 KEGG:ns NR:ns ## COG: SP0479 COG0168 # Protein_GI_number: 15900394 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Streptococcus pneumoniae TIGR4 # 1 478 1 478 479 543 66.0 1e-154 MNRSIVRFLISKLLLIEAGLLVVPLIVALIYQEDAKVFASILGTMAILLFIGVLGTLFKP KNYHIYTKEGMLIVALCWVLWSFFGGLPFVFAGQIPSVIDAFFEMSSGFTTTGATILTDT GVLTHSLLFWRSFAHLIGGMGVLVFALAIMNNSKNGHHEVMRAEVPGPIFGKVVAKLKNT AQILYIIYLTMFVIFAVILWLCGMPVFDSIITAMGGAGTGGFAVYNDSIAHYNSDLITYV VTVGTLLFGVNFNLYFYILFRKIRLFFQDEELRTYLTIVAVSTGLIILNIFGIYQNLADS FKYSFFEVSTIITTTGFGLTDITKWPLFSQYILLLLMFIGGSAGSTAGGFKVIRAMIIAK IARNQTLASLYPNRILSLHINGSVLDKETQHSVLKYLAVYVLIILSLVTILSLDNQNFLI VTSAAASTFNNIGPLLGTTDSFAIFSPLSKLIMGFAMIAGRLEIYPLLLLFLPKTWSKI >gi|311101897|gb|AEKO01000003.1| GENE 71 65949 - 66197 72 82 aa, chain - ## HITS:1 COG:SP1873 KEGG:ns NR:ns ## COG: SP1873 COG0759 # Protein_GI_number: 15901701 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 77 1 77 80 121 75.0 3e-28 MKKFLIALVKAYQRWISPLFPPSCRFRPTCSVYMIQAIEKHGLKGIIMGIARILRCHPLS ETGDDPVPDYFSLKRNKTPLDK >gi|311101897|gb|AEKO01000003.1| GENE 72 66197 - 66922 894 241 aa, chain - ## HITS:1 COG:SPy0369 KEGG:ns NR:ns ## COG: SPy0369 COG1187 # Protein_GI_number: 15674518 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pyogenes M1 GAS # 1 239 1 239 240 390 84.0 1e-108 MRINKYIAHAGVASRRKAEELIKEGRVTLNGKTVTELATIVKSGDIVEVNGSPIYNEEKV YYLLNKPRGVISSVSDEKNRKTVIDLMPHVKERIYPVGRLDWDTTGLLILTNDGDFTDKM IHPRNEIDKVYLARVKGIATKENLRPLIRGVVLDGKKTQPARYNIIKVDHEKNRSVVELT IHEGRNHQVKKMFESVGLLVDKLSRTRFGTLDLTGLRPGESRRLNKKEISQLHNVAVNKV K >gi|311101897|gb|AEKO01000003.1| GENE 73 67015 - 67596 583 193 aa, chain - ## HITS:1 COG:SPy0367 KEGG:ns NR:ns ## COG: SPy0367 COG1386 # Protein_GI_number: 15674517 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Streptococcus pyogenes M1 GAS # 3 181 2 180 183 234 69.0 5e-62 MSSHLARLEALLFVAGEDGLSLRTMAQLLEMPVTGLTQSLEKLQAKYEADEDTALCLLES SNTYKIVTKPDFASLLRDYSKTPINQSLSRASLEVLSIVAYKQPITRAEVDDIRGVNSSG AIAKLQAFDLIREAGKKDAVGRPNLYATTDYFLDYMGINSLDELVAINQLELEEQETSLF REDASEELEDLDN >gi|311101897|gb|AEKO01000003.1| GENE 74 67589 - 68302 587 237 aa, chain - ## HITS:1 COG:SPy0366 KEGG:ns NR:ns ## COG: SPy0366 COG1354 # Protein_GI_number: 15674516 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 233 1 231 233 249 63.0 3e-66 MDIKLKDFEGPLDLLLHLVSKYEVDIYDVPIVEVIEQYLAYLATLQAMKLEVAGEYMLMA SQLMLIKSRKLLPTVVEAEPEADDPELELLSQLEEYARFKAASQELAKQHEVRAQYFSKP KVELVYEDVTLNQDKTIQDIFLAFSKIMAEKQEEIRRNHTTIARDDYKIEDMMLIIEEAF GSKNELHLDELFTDAKDMNQVITLFLATLELIKVHRISVQQETIFGTITLRKEWTNE >gi|311101897|gb|AEKO01000003.1| GENE 75 68302 - 69075 411 257 aa, chain - ## HITS:1 COG:SP1877 KEGG:ns NR:ns ## COG: SP1877 COG0582 # Protein_GI_number: 15901705 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 17 254 6 245 246 166 43.0 6e-41 MTLHMTISSFQKQLTTQITDFLATKVISESSKQAYAYDLKQFATAISGQIDQASLKLYEN QLKEWKPSVQKRKRSAVNQFLLYLYQKGELTKFFKLSETVILPSQEDKLRILNLSSLYEG HEGVGKLSCLLILELGLLPSEILELDWVDIDLDFGVVTVAKGSTKRVLRLEADVKQYLLA IKDINSQGLLLGKVYTRQWLYKQIQTYVSDCGLSGVTAQVLRQQFILRQIEKGTGAFELA RLLGLKSPVTLEKYYKT >gi|311101897|gb|AEKO01000003.1| GENE 76 69017 - 69499 513 160 aa, chain - ## HITS:1 COG:SPy0364 KEGG:ns NR:ns ## COG: SPy0364 COG0517 # Protein_GI_number: 15674514 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Streptococcus pyogenes M1 GAS # 1 153 1 153 153 188 63.0 4e-48 MIAKEFEDFLLARLDNYLIPSDQVAIFIDSHNANHVVLLLTSNGYSRVPVLTKDKHYLGT ISLTDIKRYQDEHNLQEWEMVNRDIGPMTSDVVETVEDNANLNEVMHKLVNNPFLPVVDS QGIFKGIITRKSILKAVNSLLHDFTHDYIIIPKTTDNSDH >gi|311101897|gb|AEKO01000003.1| GENE 77 69496 - 69993 415 165 aa, chain - ## HITS:1 COG:SPy0363 KEGG:ns NR:ns ## COG: SPy0363 COG0622 # Protein_GI_number: 15674513 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Streptococcus pyogenes M1 GAS # 1 165 9 173 173 251 69.0 5e-67 MSDSHGERDIVVDIKNRYQGKVDAIFHNGDSELESSDPVWEGIHVVRGNCDYDSGYPERL VVKLGDVIIAQTHGHLYGINFTWDKLDLWAQQEDADICLYGHLHAAAAWRNGKTVYINPG SVSQPRGPIHEKLYAKVIINDAKIRVEYYTRDHELYSELTQEFER >gi|311101897|gb|AEKO01000003.1| GENE 78 69999 - 70973 416 324 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157155704|ref|YP_001464307.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli E24377A] # 127 315 4 192 197 164 48 1e-39 MTKSIFEYKDDQDWYLASFGSYNHLTCFGGDEAYEQFVDFFQALTNVLAVSDFQLHIAKH SSDLRLVSFILDCLKEETGRDLAVTQHQGALIVSEGDKLVYVHVPREGVVLSDFFGSDNK SDFGDVLLIATRNEGKTKEFRELFGKLGIKVENLNDYPDLPEVAETGMTFEENARLKAET ISELTGKMVLSDDSGLQVDVLGGLPGVWSARFAGLEATDAENNAKLLHELAMVLDDSKRS AQFHTTLVVAAPGRDSLVVDADWKGYIGREPKGDNGFGYDPLFLVGNTGKTAAELSAEEK NEQSHRGQAVKKLMEVFPAWQNKQ >gi|311101897|gb|AEKO01000003.1| GENE 79 70966 - 71781 752 271 aa, chain - ## HITS:1 COG:SP1881 KEGG:ns NR:ns ## COG: SP1881 COG0796 # Protein_GI_number: 15901709 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Streptococcus pneumoniae TIGR4 # 1 264 1 264 264 413 75.0 1e-115 MDNRPIGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIREYTWQLVKF LLTKDVKMIVIACNTATAVVWEEIKEALDIPVLGVVLPGSSAAIKSSQSGQIGVIGTPMT IASNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMAPLVDKVDTLV LGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINRSREVEDKTEEYYTTA SVLGFKEIAEQWLGEEVTVQHVDLDKELEND >gi|311101897|gb|AEKO01000003.1| GENE 80 71846 - 72097 383 83 aa, chain - ## HITS:1 COG:SPy0359 KEGG:ns NR:ns ## COG: SPy0359 COG3763 # Protein_GI_number: 15674510 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 80 1 80 80 87 57.0 4e-18 MNTVLWIILVFVALLGGFYGGAYFARKQIEKELAENPRLNVDAVRTMMSAAGQKPNEAKV RQTYNQIIKQQKQALVDSKKKKK >gi|311101897|gb|AEKO01000003.1| GENE 81 72338 - 72652 202 104 aa, chain + ## HITS:1 COG:no KEGG:str0253 NR:ns ## KEGG: str0253 # Name: not_defined # Def: TetR/AcrR family transcriptional regulator # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 100 1 100 179 130 78.0 1e-29 MLKESTISEQKIVNAFTELLKESSLEQISIADIIKKVNLSRPTFYYYSNQDDLVETTFSK ILDKISSILQKDITYQEGVLTEVRRYLKGNHKLSHINDTHSKYQ >gi|311101897|gb|AEKO01000003.1| GENE 82 72627 - 72875 257 82 aa, chain + ## HITS:1 COG:no KEGG:stu0253 NR:ns ## KEGG: stu0253 # Name: not_defined # Def: TetR/AcrR family transcriptional regulator # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 82 98 179 179 81 64.0 8e-15 MTHIPNINRLIRKFITETILNSDIEIITELMEKTIISQSSILWKYTISTIITILPLWLKE DCIESPEEMANIILEAVIIKAK >gi|311101897|gb|AEKO01000003.1| GENE 83 72904 - 74157 1540 417 aa, chain - ## HITS:1 COG:SP1978 KEGG:ns NR:ns ## COG: SP1978 COG0019 # Protein_GI_number: 15901801 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 3 416 2 415 416 608 70.0 1e-174 MTKTPFITADKLDQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNP AILKILKEEGCGVDCATDTELVMSNKIGFDSTAISFTSNDTRAEEFVYARDINATINLDA YEDIFFLEEAAGLPETLSLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKG VKSFGLHAFLASNTVTNEYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANK QNDIAVIGEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVG VDASAVNLLRPAMYDAYHHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDT LVIHDTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFATLDGFDFEI >gi|311101897|gb|AEKO01000003.1| GENE 84 74402 - 74995 602 197 aa, chain + ## HITS:1 COG:no KEGG:STER_0298 NR:ns ## KEGG: STER_0298 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 86 21 106 112 117 90.0 3e-25 MSRRGLKLKADQTLVEASFKLEDISEDMKNELKTSAKQFYLKDEDGKKVTASKIDKDDLP ILFNKNNNVENATDDFGKVEANDYKTVSLFFEVNNDSKYKLYFESKDEKTKGQTVSTSPK NFDGQTTTNVKKDVDTYFNAVSLDGESKNYNKFVSNDLDKAKSELSQYFSDSLQYSYDET DNIKPTGDEVPKVSGCV >gi|311101897|gb|AEKO01000003.1| GENE 85 75211 - 75399 154 62 aa, chain + ## HITS:1 COG:no KEGG:stu0250 NR:ns ## KEGG: stu0250 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 45 53 97 98 73 91.0 2e-12 METYLPNSIKKVSPSVPKTDETNIFKDYSVELTKKDDKWAFSDKDSYVEKWDYYLLSYTY TG Prediction of potential genes in microbial genomes Time: Sun May 29 18:20:29 2011 Seq name: gi|311101838|gb|AEKO01000004.1| Streptococcus vestibularis F0396 ctg1126932565722, whole genome shotgun sequence Length of sequence - 64509 bp Number of predicted genes - 58, with homology - 56 Number of transcription units - 31, operones - 20 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 2458 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - TRNA 2605 - 2677 84.6 # Ala TGC 0 0 - SSU_RRNA 2739 - 4271 99.0 # AY188352 [D:1..1546] # 16S ribosomal RNA # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. 1 1 Op 1 3/0.000 - CDS 4660 - 5133 451 ## COG4720 Predicted membrane protein 2 1 Op 2 3/0.000 - CDS 5123 - 5884 900 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 3 1 Op 3 . - CDS 5874 - 6623 401 ## COG0101 Pseudouridylate synthase - Prom 6766 - 6825 5.9 + Prom 6582 - 6641 5.2 4 2 Tu 1 . + CDS 6855 - 8111 575 ## COG3464 Transposase and inactivated derivatives + Term 8312 - 8350 -1.0 - Term 8067 - 8101 5.3 5 3 Tu 1 . - CDS 8148 - 9302 1082 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Prom 9468 - 9527 6.2 - Term 9475 - 9511 4.0 6 4 Op 1 29/0.000 - CDS 9651 - 11474 2339 ## COG0443 Molecular chaperone 7 4 Op 2 21/0.000 - CDS 11560 - 12084 527 ## COG0576 Molecular chaperone GrpE (heat shock protein) 8 4 Op 3 1/0.143 - CDS 12124 - 13113 805 ## COG1420 Transcriptional regulator of heat shock gene - Prom 13212 - 13271 6.2 - Term 13312 - 13342 2.0 9 5 Op 1 1/0.143 - CDS 13351 - 13932 487 ## COG1705 Muramidase (flagellum-specific) 10 5 Op 2 2/0.000 - CDS 13929 - 14726 768 ## COG1876 D-alanyl-D-alanine carboxypeptidase 11 5 Op 3 1/0.143 - CDS 14713 - 15417 813 ## COG0406 Fructose-2,6-bisphosphatase - Prom 15442 - 15501 5.8 - Term 15486 - 15522 4.1 12 6 Op 1 9/0.000 - CDS 15534 - 16871 1731 ## COG2848 Uncharacterized conserved protein 13 6 Op 2 . - CDS 16889 - 17155 389 ## COG3830 ACT domain-containing protein - Prom 17178 - 17237 9.5 - Term 17429 - 17475 4.1 14 7 Tu 1 . - CDS 17476 - 18693 995 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) - Prom 18738 - 18797 6.6 - Term 18809 - 18850 7.4 15 8 Op 1 . - CDS 18859 - 19695 698 ## COG4509 Uncharacterized protein conserved in bacteria - Prom 19720 - 19779 1.7 - Term 19716 - 19761 8.9 16 8 Op 2 . - CDS 19782 - 20432 997 ## gi|296875496|ref|ZP_06899569.1| possible amylase-binding protein AbpA - Prom 20569 - 20628 5.1 + Prom 20513 - 20572 7.2 17 9 Tu 1 . + CDS 20601 - 21074 258 ## COG1943 Transposase and inactivated derivatives + Term 21179 - 21220 6.5 18 10 Tu 1 . - CDS 22384 - 23433 951 ## COG1808 Predicted membrane protein - Prom 23580 - 23639 9.3 - Term 23663 - 23701 5.4 19 11 Op 1 . - CDS 23711 - 24013 271 ## EF1098 hypothetical protein 20 11 Op 2 . - CDS 24075 - 24458 292 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 24509 - 24568 4.9 - Term 24651 - 24689 5.0 21 12 Op 1 3/0.000 - CDS 24919 - 25866 985 ## COG0679 Predicted permeases - Term 25897 - 25935 -0.5 22 12 Op 2 . - CDS 25943 - 27568 2041 ## COG0281 Malic enzyme - Prom 27809 - 27868 7.0 23 13 Op 1 2/0.000 - CDS 28553 - 28795 267 ## COG3464 Transposase and inactivated derivatives - Prom 28815 - 28874 1.7 24 13 Op 2 2/0.000 - CDS 28900 - 29808 280 ## COG3464 Transposase and inactivated derivatives - Prom 29835 - 29894 3.1 - Term 29868 - 29928 17.0 25 13 Op 3 . - CDS 29937 - 30734 388 ## COG3464 Transposase and inactivated derivatives - Prom 30774 - 30833 2.7 26 14 Tu 1 . - CDS 31038 - 31178 69 ## stu1444 IS1193 transposase - Prom 31369 - 31428 7.3 - Term 31393 - 31425 1.1 27 15 Op 1 59/0.000 - CDS 31452 - 31844 653 ## PROTEIN SUPPORTED gi|55820196|ref|YP_138638.1| 30S ribosomal protein S9 28 15 Op 2 1/0.143 - CDS 31872 - 32318 760 ## PROTEIN SUPPORTED gi|55820195|ref|YP_138637.1| 50S ribosomal protein L13 29 15 Op 3 . - CDS 32375 - 32422 82 ## PROTEIN SUPPORTED gi|94542786|gb|ABF32835.1| LSU ribosomal protein L13P - Prom 32497 - 32556 4.5 - Term 32426 - 32487 2.1 30 16 Op 1 . - CDS 32565 - 32747 158 ## COG1476 Predicted transcriptional regulators 31 16 Op 2 . - CDS 32757 - 32945 69 ## gi|228477823|ref|ZP_04062451.1| hypothetical protein STRSA0001_1691 - Prom 33071 - 33130 5.0 - Term 33338 - 33371 4.0 32 17 Op 1 1/0.143 - CDS 33378 - 34238 1095 ## COG1307 Uncharacterized protein conserved in bacteria 33 17 Op 2 6/0.000 - CDS 34247 - 34789 420 ## COG3688 Predicted RNA-binding protein containing a PIN domain 34 17 Op 3 . - CDS 34764 - 35507 542 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Prom 35527 - 35586 5.3 - Term 35583 - 35630 1.1 35 18 Tu 1 . - CDS 35868 - 35975 63 ## - Prom 36012 - 36071 1.6 - Term 36537 - 36565 -0.0 36 19 Op 1 8/0.000 - CDS 36569 - 36970 329 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 37 19 Op 2 4/0.000 - CDS 36963 - 38285 1549 ## COG0215 Cysteinyl-tRNA synthetase - Prom 38367 - 38426 7.7 - Term 38419 - 38460 4.0 38 20 Op 1 . - CDS 38683 - 39303 678 ## COG1045 Serine acetyltransferase 39 20 Op 2 . - CDS 39377 - 40147 672 ## STER_0115 hypothetical protein 40 20 Op 3 . - CDS 40144 - 42381 1599 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase - Prom 42549 - 42608 7.9 + Prom 42428 - 42487 4.6 41 21 Tu 1 1/0.143 + CDS 42569 - 43837 1217 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 43846 - 43882 5.3 + Prom 43899 - 43958 5.8 42 22 Tu 1 . + CDS 43982 - 45238 1260 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 45247 - 45275 1.4 - Term 45316 - 45352 3.0 43 23 Op 1 3/0.000 - CDS 45367 - 47817 1751 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 44 23 Op 2 . - CDS 47818 - 48273 276 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 - Prom 48306 - 48365 6.6 + Prom 48345 - 48404 6.1 45 24 Op 1 . + CDS 48590 - 48892 289 ## STER_0107 hypothetical protein 46 24 Op 2 . + CDS 48805 - 49059 174 ## STER_0107 hypothetical protein + Term 49072 - 49106 1.1 - Term 49095 - 49141 7.3 47 25 Op 1 38/0.000 - CDS 49162 - 50202 484 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 50222 - 50262 8.2 48 25 Op 2 . - CDS 50313 - 51080 1288 ## PROTEIN SUPPORTED gi|228477778|ref|ZP_04062406.1| ribosomal protein S2 - Prom 51196 - 51255 7.0 + Prom 51271 - 51330 11.4 49 26 Op 1 . + CDS 51508 - 52296 265 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 50 26 Op 2 . + CDS 52293 - 52583 127 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 52629 - 52675 0.6 + TRNA 52759 - 52832 60.7 # Cys GCA 0 0 - Term 52867 - 52909 5.3 51 27 Op 1 1/0.143 - CDS 52917 - 53462 700 ## COG0431 Predicted flavoprotein - Prom 53485 - 53544 3.9 52 27 Op 2 . - CDS 53549 - 53977 517 ## COG1846 Transcriptional regulators - Prom 54005 - 54064 4.5 - Term 54051 - 54105 4.7 53 28 Op 1 1/0.143 - CDS 54110 - 54340 284 ## COG2261 Predicted membrane protein 54 28 Op 2 . - CDS 54360 - 55601 1425 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) - Prom 55626 - 55685 5.7 - Term 55697 - 55737 6.6 55 29 Op 1 . - CDS 55765 - 60159 3243 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 56 29 Op 2 . - CDS 60132 - 60332 146 ## - Prom 60451 - 60510 2.6 - TRNA 60211 - 60294 70.3 # Leu CAA 0 0 - TRNA 60304 - 60375 64.6 # Gln TTG 0 0 - TRNA 60384 - 60456 67.3 # His GTG 0 0 - TRNA 60468 - 60538 53.0 # Trp CCA 0 0 57 30 Tu 1 . + CDS 60531 - 60755 238 ## gi|76798491|ref|ZP_00780727.1| hypothetical protein SAJ_0157 - TRNA 60544 - 60624 65.0 # Tyr GTA 0 0 - TRNA 60639 - 60711 75.1 # Phe GAA 0 0 58 31 Tu 1 . - CDS 60677 - 60889 96 ## gi|19747365|gb|AAL96904.1| hypothetical protein spyM18_0084 - Prom 60958 - 61017 2.9 - TRNA 60715 - 60788 77.6 # Met CAT 0 0 - TRNA 60798 - 60887 61.7 # Ser TGA 0 0 - TRNA 60896 - 60967 64.7 # Glu TTC 0 0 - TRNA 60971 - 61047 86.7 # Ile GAT 0 0 - TRNA 61081 - 61151 71.9 # Gly TCC 0 0 - TRNA 61156 - 61228 84.8 # Val TAC 0 0 - 5S_RRNA 61168 - 61416 88.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - LSU_RRNA 61433 - 64331 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. Predicted protein(s) >gi|311101838|gb|AEKO01000004.1| GENE 1 4660 - 5133 451 157 aa, chain - ## HITS:1 COG:SP1597 KEGG:ns NR:ns ## COG: SP1597 COG4720 # Protein_GI_number: 15901437 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 153 1 153 153 163 56.0 1e-40 MQNKKTKELTLLAILTALSVTFGFVAKIPTPTGLLTLVDAGIYFTAFCLGKKEGAIVGGL SAFLIDLLSSAPQWMFISLLIHGAQGYFAGFKGNYRILGLLIAAVVMVGGYALASVFMYG TGASISEVIPNFCQNALGVVVGWVLYQGFKKVQSKKG >gi|311101838|gb|AEKO01000004.1| GENE 2 5123 - 5884 900 253 aa, chain - ## HITS:1 COG:SP1598 KEGG:ns NR:ns ## COG: SP1598 COG0351 # Protein_GI_number: 15901438 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 251 1 251 257 299 61.0 4e-81 MRDELILAISGNDIFSGGGLHADLATFTTNKQHGFVALTCLTAMTENGFEVIPVDTNVFK QQLDSLKDVPFSAIKIGLLPNVEIAELTLDFVKNHSDIPIVLDPVLVCKETHDVEVSQLR DELVKFFPYITVITPNLPEVELLIDRKVKTLDEMKHAASYLNELGAKTVVVKGGNRLDGN KAIDVFYDGRDHKLFEEAVLDKNNTGAGCTFASSIASELVKGCSETEAVANAKAFVYESI KQSNEFGVVQYAK >gi|311101838|gb|AEKO01000004.1| GENE 3 5874 - 6623 401 249 aa, chain - ## HITS:1 COG:SPy1901 KEGG:ns NR:ns ## COG: SPy1901 COG0101 # Protein_GI_number: 15675714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 248 1 248 249 395 76.0 1e-110 MVRYKATISYDGTLFSGFQRQPNARSIQEELEKTLLRLNSGTPVTVHGAGRTDAGVHAYG QVIHFDLPQERDPEKLRFGLDTQCPDDIDIVSIELVSEEFHARYNKHSKTYEFLVDAGRP KNPMMRNYATHYPYPLSLAPMQEAAMELVGTHDFTGFTASGTSVENKVRTITQASVSIDE KTGFYIFTFSGNGFLYKQVRNMVGTLLKIGNGRMPVSQVKTVLESCDRNLAGPTAAGNGL YLKEIRYER >gi|311101838|gb|AEKO01000004.1| GENE 4 6855 - 8111 575 418 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 418 1 422 422 482 62.0 1e-136 MRLIKNTTELIGIKDQNIKISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKPSK IPLLEQAGTPTLLHLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGDLAFVAQNYETNKLIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAKIVLDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSCKLSLNSFYSKTFRQTLAPHEVVA KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRS >gi|311101838|gb|AEKO01000004.1| GENE 5 8148 - 9302 1082 384 aa, chain - ## HITS:1 COG:SPy1759 KEGG:ns NR:ns ## COG: SPy1759 COG0484 # Protein_GI_number: 15675605 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Streptococcus pyogenes M1 GAS # 8 384 1 378 378 567 81.0 1e-161 MPFVSKIMNNTEYYDRLGVSKDASQDEIKRAYRKMSKKYHPDINKEPGAEEKYKEVQEAY ETLSDDQKRAAYDQYGPDGANGFGGQGGFGGFDGGAGFGGFEDIFSSFFGGGATRNPNAP RQGDDLQYRVNLSFEEAIFGAEKEVHYNREATCKTCSGSGAKPGTSPVTCGRCHGQGVIN VDTQTPLGMMRRQVTCDVCHGTGQEIKEPCQTCHGTGHEKQSHKVSVKIPAGVETGQQIR LAGQGEAGFNGGPYGDLFVIINVNPSDKFTRDGSTIYYTLNISFVQAALGDTVEVPTVHG NVEMTIPAGTQTGKTFRLKGKGAPRLRGGSQGDQHVTVKIVTPTKLNDAQKEALLAFAKA SGDEKIAPQKKGFFNKVKDALEDL >gi|311101838|gb|AEKO01000004.1| GENE 6 9651 - 11474 2339 607 aa, chain - ## HITS:1 COG:SP0517 KEGG:ns NR:ns ## COG: SP0517 COG0443 # Protein_GI_number: 15900431 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Streptococcus pneumoniae TIGR4 # 1 607 1 607 607 971 96.0 0 MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTN PDTIISIKSKMGTSEKVSANGKEYTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYF NDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEEKILVFDLGGGTFDVSILE LGDGVFDVLATAGDNKLGGDDFDQKIIDHMVEEFKKENGIDLSTDKMALQRLKDAAEKAK KDLSGVTSTQISLPFITAGEAGPLHLEMTLTRAKFDDLTRDLVERTKTPVRQALSDAGLS LSDIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVV LLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAAD NKTLGRFQLTDIPAAPRGIPQIEVTFDIDTNGIVSVKAKDLGTQKEQTIVIQSNSGLTDE EIEKMMKDAEANAEADAKRKEEVDLRNEVDQAIFATEKTIKETEGKGFDTERDAAQSALD DLKKAQESGNLDDMKVKLEALNEKAQALAVKLYEQAAAAQQAQAGAEGAQTADNSGDDVV DGEFTEK >gi|311101838|gb|AEKO01000004.1| GENE 7 11560 - 12084 527 174 aa, chain - ## HITS:1 COG:SP0516 KEGG:ns NR:ns ## COG: SP0516 COG0576 # Protein_GI_number: 15900430 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Streptococcus pneumoniae TIGR4 # 1 174 1 174 174 218 80.0 6e-57 MTEDIKKEEVKEEEATETTEEVVEETRETSELEEAQARAEEFENKYLRAHAEMQNIQRRA NEERQQLQKYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMVQESLVHALKEEGIE EIPADSDFDHNFHMAIQTMPADDEHPADTIAQVFQKGYKLHERVLRPAMVVVYN >gi|311101838|gb|AEKO01000004.1| GENE 8 12124 - 13113 805 329 aa, chain - ## HITS:1 COG:SPy1763 KEGG:ns NR:ns ## COG: SPy1763 COG1420 # Protein_GI_number: 15675608 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Streptococcus pyogenes M1 GAS # 1 329 16 344 344 465 71.0 1e-131 MFTRTHEPVGSKALQESIDSSSATIRNDMAKLEKMGYLEKAHTSSGRMPSRAGFQYFVAN SLNLDTIDEQDIYQVVKAFDFEAFKLEDILDAAAKLLAEMTGCTAVIQDVEPTRQRLTGF DIVHLSNHDALAVLTLDESKPVTVQFAIPKNFLSSDLETLHKLVQERFLGNTVLDIHYRL RTEIPQIVQKYFKITDNVLDLFDYIFSQLFKELIFIEGKVASLTYADLKTYQFLDNPQHV ALELRSAISDDEVTKISVAESTEEVLENVTVMSHKFLIPYRGMALMHVIGPVEMDYRRMV SLVNVISRVLVMKLTDYYRYLNSNHYEVN >gi|311101838|gb|AEKO01000004.1| GENE 9 13351 - 13932 487 193 aa, chain - ## HITS:1 COG:SPy1764 KEGG:ns NR:ns ## COG: SPy1764 COG1705 # Protein_GI_number: 15675609 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 1 193 1 189 189 107 37.0 1e-23 MRRRFKLTAFISLVALFALGILLPLILHASTDDNARSVKVAYTQKGFIENLAPTAQKMSK NYGVPASILLSQAAYESNYGSSLLSVKYHNIYSLPAQPGQERIRLKDSIYSKGKWQYQKV DFAVFKDWSSSMMTYLEELRQGTWGESTYKEVAGTTSYKVAAEKLQAAGFSSDPDYAKHL ISIIETSHLSKYD >gi|311101838|gb|AEKO01000004.1| GENE 10 13929 - 14726 768 265 aa, chain - ## HITS:1 COG:SPy1765 KEGG:ns NR:ns ## COG: SPy1765 COG1876 # Protein_GI_number: 15675610 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pyogenes M1 GAS # 26 263 12 246 247 275 59.0 9e-74 MVKNNYPSRRKAKKQTNWFLVISGVLITVLLVAAGLYSVFGVSRTVQQTNGLSVTKSSKQ ATDATQSKDTKGLPDVSPKDWELLLVNRDNKSKELNPELANVDGVSVDARIAKNVKQFLA AAQEIDPSYHLISGYRSVAYQTELYNSYVQQEMAADPTLTESQAEKKVQTYSQPPGASEH QTGLAIDMSTVDSLNEADPDTVAKVKKLAPKYGFVLRFPDGKTSSTGVGYEDWHFRYVGK ESAEYMTEHNITLEEYLALLKEKTK >gi|311101838|gb|AEKO01000004.1| GENE 11 14713 - 15417 813 234 aa, chain - ## HITS:1 COG:SPy1766 KEGG:ns NR:ns ## COG: SPy1766 COG0406 # Protein_GI_number: 15675611 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 231 1 232 235 320 67.0 1e-87 MSKVKLYIARHGKTMFNTIGRAQGWSDSPLTPFGEEGIRELGVGLKAAGISFKAAYSSDS GRTIQTMDIILRETGLETIPYKRDKRIREWCFGSLDGGYDGELFYGVLPRTDAFQGKELH EVTYPELAQGILDVDTAGWAESWEVLRKRIIEGFTAIAENLERSGGGNAIVVSHGMTIAT FAWLIDPSVEHPSLDNGSVTVVAYENGKFTLEALGDMTYRQVGREIIEKENGKK >gi|311101838|gb|AEKO01000004.1| GENE 12 15534 - 16871 1731 445 aa, chain - ## HITS:1 COG:SP0239 KEGG:ns NR:ns ## COG: SP0239 COG2848 # Protein_GI_number: 15900175 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 445 1 445 445 702 88.0 0 MDIKQVTETIAMIEEQNFDVRTITMGISLLDCIDSDIDKAAEKVYNKIVSKAKNLVAVGD EIAAELGIPIVNKRVSVTPISIIGAATDATDYVPFAKALDRAAKEIGINFIGGFSALVQK GYQKGDEILINSIPRALAETDFVCSSVNIGSTKTGINMTAVRDMGRIIKEASEADPMGPG KLVVFANAVEDNPFMAGAFHGVGEADVVINVGVSGPGVVQRAVEKVPGESFDVLAETVKK TAFKITRVGQLVGQMASERLGVEFGIVDLSLAPTPAVGDSVARVLEAMGLEVVGTHGTTA ALALLNDQVKKGGIMACNQVGGLSGAFIPVSEDEGMIAAVQSGHINLEKLEAMTAICSVG LDMIAIPADTPDTTIAAMIADEAAIGVINQKTTAVRIIPYGKEGDMLELGGLLGYAPVMK VNKASSADFIARGGQIPAPVHSFKN >gi|311101838|gb|AEKO01000004.1| GENE 13 16889 - 17155 389 88 aa, chain - ## HITS:1 COG:SP0238 KEGG:ns NR:ns ## COG: SP0238 COG3830 # Protein_GI_number: 15900174 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Streptococcus pneumoniae TIGR4 # 1 88 1 88 88 129 81.0 1e-30 MKAIITVVGKDKAGIVAGVATKVAELGLNIDDISQTVLDEFFTMMAVVSSEDKQDFTHLR AELEAFGESLNVKINIQSSAIFDAMHNL >gi|311101838|gb|AEKO01000004.1| GENE 14 17476 - 18693 995 405 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 16 404 42 430 430 471 58.0 1e-133 MKQSQAKKHDNAMTNKILMGLIALVLGLLFLEILIIHSKNEQQKSASNQVQTARIMANGD LLYHDGLYMSALQADGSYDFTENFTYVKPWLKQADLVLGDFEGTINPDYPLSGYPLFNAP QSVTAAIKDAGYDVMDLAHNHILDSGLEGAFTTADAFKEVGIDPVGVYENPVRDKAPLLI KNVNGIKVAILSYAYGYNGLESNLTDKEVADHLSNLDEKRMKAEIQRAEKEADVTVIMPQ MGVEYRLEPTDEQITLYHKMIDWGADIIFGGHPHVVEPSEVVKKDGQQKLIIYSMGNFIS NQRIETMDGVDSAKWTERGVLMDVTLEKKNGQTAIKTAQAHPTWVNRTPKGTTSPEGYPL YTYQTYILEDFIKGGKYRNKLDEETEERIDTAYKEMNAHVNLKWK >gi|311101838|gb|AEKO01000004.1| GENE 15 18859 - 19695 698 278 aa, chain - ## HITS:1 COG:SA0982 KEGG:ns NR:ns ## COG: SA0982 COG4509 # Protein_GI_number: 15926719 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 63 242 52 225 244 84 30.0 2e-16 MGSHNRKSTGSLKKLIVGISALVIAALAIFLGFQYMSPKASSSNGVKSALTTKKASTYKI SDEEKSYLKNKFDGLTATNPDAIAYIYAPGTQLDEPVVQTKDNSTYLDKTFEGGNEPLFG TVFMDMDNKKDFSDRLTWLFGHARGSQVEDHRMFNDVNYYSDQSFFDNHKYVVIETPQRK YYYEALAMVIVPEDTAFYRTSFKDDKDFKEQLDIIYNTADVKNKDLKVSASDKYLVLSTC REEDATIRANLYLRQIPDSEMTDFVAKHGKDLEYKPTR >gi|311101838|gb|AEKO01000004.1| GENE 16 19782 - 20432 997 216 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|296875496|ref|ZP_06899569.1| ## NR: gi|296875496|ref|ZP_06899569.1| possible amylase-binding protein AbpA [Streptococcus parasanguinis ATCC 15912] # 1 216 1 207 207 107 51.0 4e-22 MKKVLLTSAAVLAVFAAGTQVFAQGENPKNSNQLTQKSYVSWADAAAEANAQVDAHSADI AAEAQNDPTVKAAANALAQAQDTVGHNHESDVAAAQSKYDEALSNATNAVRNKYIQKFQQ TYVDAAKAEGRYYNESGVEANRTNDQRIEDDLIANGKKAANDKAEAKTAPSKEDMKKAQT SAEKVKKAEAKSKAAKENKAGSKAEAKTLPNTAAVK >gi|311101838|gb|AEKO01000004.1| GENE 17 20601 - 21074 258 157 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 150 5 148 157 197 62.0 9e-51 MAKTSYSLSHTKWMCKYHIVFTPKYRRKAIYYKVRSDLIDIIRHLCQYKGVEIIEGHMMP DHVHMLVLIPPKLAISDFMGYLKSKSALMIFDKHANLKYKYGNRKFWARGYYVSTVGLNE KTVARYIREQEKDDIALDKLSVKEYEDPFSDGGFRTR >gi|311101838|gb|AEKO01000004.1| GENE 18 22384 - 23433 951 349 aa, chain - ## HITS:1 COG:SP1264 KEGG:ns NR:ns ## COG: SP1264 COG1808 # Protein_GI_number: 15901124 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 320 1 322 347 326 50.0 5e-89 MTGNYLTREYREKLYDDLHVRLRDTVILMCAIFIASIGLNMNSTAVIIGAMLISPLMTPI VGLGFGLAIFDTRLIKQSLEVLFIQVLVSLLVSTLYFWISPLSYASNELIARTSPTIWDV VIAIAGGIAGVIGSRKKEANNIVPGVAIATALMPPICTAGYGLANGNVRYLFGALYLFLI NCVFIMLTNIVGTRILMRKSPLSSFKELNIKMRIGLISLIVLLVLPASYSAVTLTMDQAR KEGIKQFVGEEFANHTVINQVYKSRNNELVLTVVGDPISEEELETIRQKQASYGIQSVQL KVNQVHNSTKLDSETTKEFYENIDKYIDQKLSEKDSQNDLVKENEADKE >gi|311101838|gb|AEKO01000004.1| GENE 19 23711 - 24013 271 100 aa, chain - ## HITS:1 COG:no KEGG:EF1098 NR:ns ## KEGG: EF1098 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 1 98 1 98 101 125 68.0 5e-28 MKESYFDGGILDYIGYFILAALINLLTFGIATSWAVFMIQNWKTKHTVVDGQRLYFDGTG AQLFGNWIKWFLLTIITFGIYGFWLNIKMEQWIVKHTHHV >gi|311101838|gb|AEKO01000004.1| GENE 20 24075 - 24458 292 127 aa, chain - ## HITS:1 COG:SP0913 KEGG:ns NR:ns ## COG: SP0913 COG0577 # Protein_GI_number: 15900794 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 127 534 660 662 180 81.0 6e-46 MFGGFFFIVIFLSIIFIVGAVLVIYYKQISEGYEDRERFVILQKVGLDQKQIKQTINKQV LTVFFLHVIFSFIHLAFSYHILNLILKVIEVVDTAMMLTVTLSVCGVFALIYVLIFIITS RSYRKIV >gi|311101838|gb|AEKO01000004.1| GENE 21 24919 - 25866 985 315 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 11 314 7 299 301 74 24.0 2e-13 MSLFLTSITSIIPIIAIIVLGYILQVKGWFGDAFGPNLSRLIMNVALPASIFVSVMKYLT LDKLISLSGGLLYTFVAFILGYMVAYIAVMLFKIRPGRRGTMINTFVNANTIFIGLPLNV ALFGDQALPYFLIYYITNTISTWTLGVYLMTSDSKSGQSKKATKFDWKKLLPAPLVGFLV ALLVLILRIPIPDFATNTLTYVGNIVTPLSLIYIGIVLAKAGLNTIAFDKDTIVTLVGRF ILAPLIMLLVLKFFAPNMAAVEFKTFMIQSATPALAVLPILANQGKGDVEFSTNVVTLST VLFIVVIPILQTLLG >gi|311101838|gb|AEKO01000004.1| GENE 22 25943 - 27568 2041 541 aa, chain - ## HITS:1 COG:L121483 KEGG:ns NR:ns ## COG: L121483 COG0281 # Protein_GI_number: 15672882 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Lactococcus lactis # 1 540 1 540 540 890 81.0 0 MTAHDILNNPFLNKGTAFTLEERKELGLIGLLPPYVQTIEEQAAQTYEQMQTKVNDLEKR LFLMEIFNTNRTLFYYLFSQHLEEFNPIVYDPTIADTIEGYSDLFVDPQYAGYLDINHPE NIEATLKNAAGDREIRLIVVTDAEGILGIGDWGTNGVDISVGKLMVYTGAAGIDPSMVLP LVIDAGTNREELRNNSNYLGNRHERVRGDRYYDFLDQFVQTAERLFPKLYLHWEDFGRLN AANILEKYRKQIPTFNDDIQGTGIVTLGGIFGSLDISGEKLTDQVYLCYGGGTAGAGIAS RVLREMVSEGLSEEEAYKRFFMVDKQGLLFDDMDDLTPEQKPFAKKRADFSNADKLTDLL EVVKTVKPTILVGTSTQPNTFTKEIVEAMCENTERPMIFPLSNPTKLAEASAKDLIEWSD GKAFVATGIPADTVSYKGVDYVIGQANNALIYPGLGLGMLASEASLLTDEMIGAAAHSLS GIVNPGQPGAPVLPPFKYVADVSIKVAEAVAKKAQEQGLARAEETDMAKAVRDLKWYPEY R >gi|311101838|gb|AEKO01000004.1| GENE 23 28553 - 28795 267 80 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 79 343 421 422 92 67.0 2e-19 MSKVNHYFQTVFRTFIRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKK RVFITLNIKKEKTYQVLSRC >gi|311101838|gb|AEKO01000004.1| GENE 24 28900 - 29808 280 302 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 301 1 305 422 354 61.0 1e-97 MRLIKNTTELIGIKDPNIIISLVFETDTHIEVQAKLDYPAPPCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLCLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLHVSTSTVYRKLDQFTFKKHYDKLPAIMSWDEFGFKKGALAFIAQNYETNELIT ILDNRRQTTIRNHFLKYPLKVRRKVQFITMDMSGAYIPLAHRLFPNAKIVLDRFHIIQHL GRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAHMKLLR RH >gi|311101838|gb|AEKO01000004.1| GENE 25 29937 - 30734 388 265 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 264 158 421 422 307 61.0 1e-83 MSWDEFGFKKGELAFVAQNYETNKLITILDNRRQTTIRNYFLKYPLKVRQQVQFITMDMS GAYIPLARKLFPNAKIVLNQFHIIQHLGRAFLKTRIVIMNQFDKKSLPYRALKNHWRLFQ KDSRKLSFNSFYSKTFRQTLAPHEVVEKTLNFSEELANYYNLYQLLLFHFQEKRVDEFFE FIQENLNVVNHYFQTVFRTFLRLKQYIKNSLETDYSNAKLEATNKLIKDIKRLGFGFRNF INFRKRVFITLNIKKEKTYQVLSRC >gi|311101838|gb|AEKO01000004.1| GENE 26 31038 - 31178 69 46 aa, chain - ## HITS:1 COG:no KEGG:stu1444 NR:ns ## KEGG: stu1444 # Name: tnp1193 # Def: IS1193 transposase # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 41 1 41 418 83 95.0 3e-15 MRLIKNTTELIGIKDQNIIISLVFESDTHIEIQAKLDYPAPPWNDD >gi|311101838|gb|AEKO01000004.1| GENE 27 31452 - 31844 653 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55820196|ref|YP_138638.1| 30S ribosomal protein S9 [Streptococcus thermophilus LMG 18311] # 1 130 1 130 130 256 99 3e-67 MAQAQYAGTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRLVINQPFAVTSTEGS YDVHVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKK ARKASQFSKR >gi|311101838|gb|AEKO01000004.1| GENE 28 31872 - 32318 760 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55820195|ref|YP_138637.1| 50S ribosomal protein L13 [Streptococcus thermophilus LMG 18311] # 1 148 1 148 148 297 100 1e-79 MNKTTFMAKPGQVERKWYVVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVIN AEKVKLTGKKATDKIYYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTLGRAQ GMKLKVFVGGEHTHAAQQPEVLDISGLI >gi|311101838|gb|AEKO01000004.1| GENE 29 32375 - 32422 82 15 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|94542786|gb|ABF32835.1| LSU ribosomal protein L13P [Streptococcus pyogenes MGAS9429] # 1 15 1 15 183 36 93 3e-85 MFTPFERPRNLPNTF >gi|311101838|gb|AEKO01000004.1| GENE 30 32565 - 32747 158 60 aa, chain - ## HITS:1 COG:SPy1934 KEGG:ns NR:ns ## COG: SPy1934 COG1476 # Protein_GI_number: 15675737 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 57 1 61 68 81 70.0 4e-16 MKNLKLKSARVAKDLTQQGLADAIGVSRQTISPIEKGDYNPTMDLYIAICKTLDQLFLGS >gi|311101838|gb|AEKO01000004.1| GENE 31 32757 - 32945 69 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477823|ref|ZP_04062451.1| ## NR: gi|228477823|ref|ZP_04062451.1| hypothetical protein STRSA0001_1691 [Streptococcus salivarius SK126] # 1 61 95 155 156 70 67.0 3e-11 MLLFGIVISSIGLLNLVQSIEMNNNIMSSVAFLTLGLILICDGLVIIKKIRKNRLEELED EA >gi|311101838|gb|AEKO01000004.1| GENE 32 33378 - 34238 1095 286 aa, chain - ## HITS:1 COG:SPy1936 KEGG:ns NR:ns ## COG: SPy1936 COG1307 # Protein_GI_number: 15675739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 286 286 394 68.0 1e-110 MTFKILTDSTADLDEKWAQENDVELIGLTITLDDITYETVGPNRLTSDRLLEAMQEGGQP TTSQVNVGQFEEVFRRHVQNGDALLYLAFSSVLSGTYQSAVMARDMILDEYPEAVIEIVD TLAAAGGEGYLSILAAEARDQGKSLSETKAMIEDILPRLRTYFLVDDLYHLMRGGRLSKS SAIIGSLINIKPLLWLDASGKLVPLAKIRGRKKAIKEMVLNATQDIGHSTAIVAYANDFA AAENLKERLLAVDGIEQVLIMPLGPVISTHVGPDTLAVFTIGEEAR >gi|311101838|gb|AEKO01000004.1| GENE 33 34247 - 34789 420 180 aa, chain - ## HITS:1 COG:SPy1937 KEGG:ns NR:ns ## COG: SPy1937 COG3688 # Protein_GI_number: 15675740 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Streptococcus pyogenes M1 GAS # 11 180 2 171 172 250 74.0 8e-67 MKFIETDCNYEKRILLVDGYNMIAFWQETRQLFKANQLDEARETLIRKLNHYANFEHIDI ICVFDAQFVPGSRQRYDQYRVSVIFTEADETADSYIERSAAEMNTVQNLVEVATSDLNEQ WAIFSQGALRVSARELEERVNTVKSDLDKMSAHIDLTTPKLRPWDETQLGKLQNLLNEIE >gi|311101838|gb|AEKO01000004.1| GENE 34 34764 - 35507 542 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 6 246 3 246 255 213 45 2e-54 MKTTKETSLDIVYGVHAVTESLEANTGNKLYIQDDLRGKNVDAIKALAAEKKVSISWTPK KTLSDMTGGAVHQGFVLRVSEFAYSDLSVIMDKAEQEENPLILILDGLNDPHNFGSILRT ADATQVTGIIIPKHRAVGVTPVVAKTSTGAVEHIPIARVTNLSQTLDKLKESGFWVFGTD MDGTPSHKWNTAGKLALIIGNEGKGISANIKKQVDEMITIPMSGHVQSLNASVAAAVLMY EVYRNRL >gi|311101838|gb|AEKO01000004.1| GENE 35 35868 - 35975 63 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTSHSEEARVQDFGEDRSVAASERGDASATSEVA >gi|311101838|gb|AEKO01000004.1| GENE 36 36569 - 36970 329 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 10 130 13 133 141 131 52 1e-29 MTKHLDVNLINGIALAFEGDAVYSLYIRRHLIFQGQTKPNQLHRLATRYVSAKAQASLIE KMIDRELLTEKELDIYKRGRNAKSHTKAKNTDVITYKMSTGFEAVMGYLHMTEDVDRLEE LVTWCIDEVEKEI >gi|311101838|gb|AEKO01000004.1| GENE 37 36963 - 38285 1549 440 aa, chain - ## HITS:1 COG:SPy1941 KEGG:ns NR:ns ## COG: SPy1941 COG0215 # Protein_GI_number: 15675744 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 440 8 447 447 742 82.0 0 MTRSLRDFIPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYCGYTVNYISNF TDVDDKIIKAANEAGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVST LIDKGFAYVAEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAETDRKENPLDFALWK AAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLEFPHHTNEIAQSEAK TGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFT EKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAFQVAMDDDFNTANGVTVLFDMAK WINSGNYDETVKDAFEKMLQVFGIVFEEEVLDEDIEKLIEERQAARANKDFATADRIRDE LAAQGIKLLDTKEGVRWTRD >gi|311101838|gb|AEKO01000004.1| GENE 38 38683 - 39303 678 206 aa, chain - ## HITS:1 COG:SPy1944 KEGG:ns NR:ns ## COG: SPy1944 COG1045 # Protein_GI_number: 15675746 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 186 1 186 193 313 83.0 1e-85 MGWWKESIDIVKKNDPAARTSLEVLLTYPGLKALAAHRISHFLWRHHCRLLARMHSQFWR FWTQIEIHPGAQIAEGVFIDHGSGLVIGETAVVEKGAMLYHGVTLGGTGKDVGKRHPTVR EGALVSAHAQVIGPIEIGKNAKVGAAAVVVADVPEDVTVVGVPAKVVRVHGKKDEEVIHD IEEGREYYSEKLEDLLKAASFHSSRL >gi|311101838|gb|AEKO01000004.1| GENE 39 39377 - 40147 672 256 aa, chain - ## HITS:1 COG:no KEGG:STER_0115 NR:ns ## KEGG: STER_0115 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 256 1 256 256 443 89.0 1e-123 MTENQELQAFDETLREFLTEPDHFLTSLALINHLQRTPVLAAQDLYAVEVEGKKVVPVFT SEQDLQSFKATQESAREQTWVERSSLDVLTQLVQAELFGLAFNLKEDGDFSNTTLFASSE LIQFINYFTQTLNNLLGEENQKAAPKDKIYLVPAFIHKREEDGQDDRLFATMSNAEGQSY VPVFTNLTSFAKWYGNETFGLPFRKAKGTILQWPLSEIYQPSTGENELDKVQGIVINPFD DQPELIDWAYFENDSK >gi|311101838|gb|AEKO01000004.1| GENE 40 40144 - 42381 1599 745 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 7 695 8 694 714 620 47 1e-177 MAKQTFEMTFAGRPLVVEVGHVAKQANGAVVVRYGDTTVLSAAVMSKKMATADFFPLQVN YEEKMYAAGKFPGGFNKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE NASAPMAAMFGSSLALSISDIPFNGPIAGVQVAYAAEDFIINPSASDKDVSQLDLTVAGT KEAINMVESGAQELSEDIMLQALLKGHEAIQELVDFQNYIVAAVGKEKAEVELLQVDAEL KVEIETAYYDQLAKAVQVEEKLAREAATQTVKEEVLASYQERFAEDEDKETILRDVVEIL EQMEHAEVRRLITEDKVRPDGRRVDEIRPLDAEIDFLPKVHGSGLFTRGQTQALSVLTLA PMSDTQLIDGLDPEYKKRFLHHYNFPQYSVGDTGRYGAPGRREIGHGALGERALAQVLPS VEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV LTDIQGLEDHFGDMDFKVAGTRRGITALQMDIKISGITPAILEEALAQAKVARFEILDVI EAVIAEPRPELAPTAPKIDSIQIPVDKIKVVIGKGGETIDKIIAETGVTIDIDEEGLVQI FSSDQDAINRAKTIISDLVREAKVGEVYTVPVVRIEKFGAFVHLFNKTDALVHISELAWE RTERVEDVVKVGDMVTVKIIKIDEKGRIDASIKTLLPKPEKIEDGENEGEHRHRRRSHHK PRHHNENGKAPQNPDKSEMKEQTEE >gi|311101838|gb|AEKO01000004.1| GENE 41 42569 - 43837 1217 422 aa, chain + ## HITS:1 COG:SP0872 KEGG:ns NR:ns ## COG: SP0872 COG1686 # Protein_GI_number: 15900755 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 8 417 1 408 413 385 50.0 1e-106 MRAKGMTMKKLQHIIMITLILIGLATPALAQEQTDDFNVAAKHAIAIETTTGKVLYEKDA TTPDGVASMTKILTAYMVYKAVDQGKINWDTEVDISDYPFNLTVDSEVSNIPLDSRKYTV KQLLDATLISSANSAAIALAEKISGTESAFVDTMTAQLKEWGITDAKLFNASGLNNKYLG DNRYPGSKPDDENTMSALDVAIIADHLIKDYPQVLEITKQTETDFEGDNKLTTHNYMLEG QDNYREGVDGLKTGTTELAGASFVAHSNEHGMSLITIVMNADNGGEDEAARFTATNELLD YVTQNWEIKTLNTKGQIVKKNDIKVADRDSQTISAKLESDLIVVQKINSKNDAVKIKAKT ITAPIKKGNTIGTATFDDKDLVGTGYISDPPQISVTANQSIKKSFFLKVWWNHIVNFFTG NK >gi|311101838|gb|AEKO01000004.1| GENE 42 43982 - 45238 1260 418 aa, chain + ## HITS:1 COG:SP0872 KEGG:ns NR:ns ## COG: SP0872 COG1686 # Protein_GI_number: 15900755 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 1 418 1 413 413 422 53.0 1e-118 MKKLITLMMTFLLCLGSVAPAFAADKKKGYDAAAKHAIAVEANTGKILYEKDATTSTGIG SIIKLLTAYMVYKAVDQGDLKWNSKVDISDYPFELTVSAGVSNIPLDARKYTVKQLLDAT LIASANSASIALAEEIGGTESKFVDMMKAQLKDWGITDAKIVNASGLNNSYLGDNIYPGS KSDEENTMSAKDVAVIAQHVVKEYPEILDITKKTEADFDGVNKLKTSNYMLKGQPSYRKG VDGLKTGTTDLAGASFVAHSNESGMSIITVILNSDNTDTDDYARFTATNDLLNYVVYHWE SKTIAKKGQAIGKSQASVLDGKSKQVTAVAKSDFNIIQKIDANNNKHIKVTTNQMQAPVK AGDKVGTATFEDKDLVGEGYLPNQGMPSMELVAGKEVKKSFFLKVWWNHFVTFVNEKL >gi|311101838|gb|AEKO01000004.1| GENE 43 45367 - 47817 1751 816 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 4 802 6 798 815 679 45 0.0 MTTYSRKMQAIFHRAQLEAERFGSPFLETWHVLLAMVEVPGSVAYLTFTDFEDRIRAEEI ETAAVLAMEKSPKDLSESDIIDLRAQSHALEAMLQEAEGIASVTGAVEVGSEHVLMAFLL HKDLMVCRLLEVAGFQYKDDSDKPRIIDLRRSLERYAGLSKQDLKAIHDLRKPKKSKASG NFANMMQPPQSSTGELSDYTKDLTAVAESGALDPVIGREKEISRMIQVLSRKTKNNPVLV GEAGVGKTALALGLAQRIASGEVPFELADMRILELDMMSVVAGTRFRGDFEERMNQIIDE IEADGKIILFIDELHTIIGSGSGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEK DAALSRRFAKITIEEPSVAEAIDILKGLRSSYEDYHRVTITDEAVETAVKAAHRYLTSKN LPDSAIDLLDEASSTVQGRIKKEAKREITSLDEALLSGDMKAAVKQYKASQKAKLPKPAL VDADQIMQTLSRLSGIPVEKMTQADSKRYLNLEAELHKRVIGQDEAVSAISRAIRRNQSG IRTGKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALLRFDMSEYMEKFAASRLNGAP PGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNILLQVLDDGVLTDSRGRKVDFS NTIIIMTSNLGATALRDDKTVGFGAQEISHNHQAMQSRIMEELKKAYRPEFINRIDEKVV FHSLEEEQLREIVKIMVKPLVSALAEKGIDLKFQPAALKHLAKDGYDVEMGARPLRRTIQ TQVEDKLSELLLGNQVVSGQTLKIGCSKDKLTFTVV >gi|311101838|gb|AEKO01000004.1| GENE 44 47818 - 48273 276 151 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 3 149 2 153 158 110 43 2e-23 MARNTSDSIEEYIKELLGQSGTAEIQRSNLADAFQVVPSQINYVIKTRFTESRGYIVESK RGGGGYIRIVKVRFSDKHHMINDLLQNLADQLSEQVFTDLIQLLFDEKIITEREGNLILA TASDDVLGADAAATRSRILRSLLLRLDRKGN >gi|311101838|gb|AEKO01000004.1| GENE 45 48590 - 48892 289 100 aa, chain + ## HITS:1 COG:no KEGG:STER_0107 NR:ns ## KEGG: STER_0107 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 86 1 86 156 135 86.0 4e-31 MKYIIALLISMIPLVELRGAVPVAIASGIPWWQALILCVIGNMIPVPIIFFFARRVLEWG ADKPLIGGFFTWCLKKVIVGVKSLKKPLETKVSSGPFYSL >gi|311101838|gb|AEKO01000004.1| GENE 46 48805 - 49059 174 84 aa, chain + ## HITS:1 COG:no KEGG:STER_0107 NR:ns ## KEGG: STER_0107 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 3 84 75 156 156 135 93.0 3e-31 MSKKGHSGGQKLEKAAGDKGVFWSLLLFVGIPLPGTGAWTGTLAASILDWDFKRSVLAVM LGVILAGIIMGTLSLLLGVNTFAH >gi|311101838|gb|AEKO01000004.1| GENE 47 49162 - 50202 484 346 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 337 1 276 283 191 39 1e-47 MAEITAKLVKELREKSGAGVMDAKKALVEVDGDIEKAIELLREKGMAKAAKKADRVAAEG LTGVYVNGNVAAVVEVNAETDFVAKNAQFVELVNETAKVIAEGKPANNEEALALTMPSGE TLEAAYVTATATIGEKISFRRFAVVEKTDAQHFGAYQHNGGRIGVVSVIEGGDDALAKQI SMHIAAMKPTVLSYTELDEQFVKDELAQLNHAIDQDNESRAMVNKPALPHLKYGSKAQLT DAVLAQAEEDIKAELTAEGKPEKIWDKIIPGKMDRFLLDNTKVDQAYTLLAQVYIMDDSK TVEAYLESVNASVVEFVRFEVGEGIEKASNDFESEVAATMAAALNN >gi|311101838|gb|AEKO01000004.1| GENE 48 50313 - 51080 1288 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228477778|ref|ZP_04062406.1| ribosomal protein S2 [Streptococcus salivarius SK126] # 1 255 1 255 255 500 100 1e-141 MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKMADTAYEFVREA AANDAVILFVGTKKQAAEAVAEEATRAGQYYINHRWLGGTLTNWDTIQKRIARLKEIKQM EADGTFEVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVIYIVDPHKEQIAVKEAKKLG IPVVAMVDTNADPDEIDVIIPANDDAIRAVKLITSKMADAIIEGNQGEDASADFQEAAAA DSIEEIVEVVEGDNN >gi|311101838|gb|AEKO01000004.1| GENE 49 51508 - 52296 265 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 56 262 1 209 306 106 31 5e-32 MIEGGMYQGKVKAKGILSVPTVKDQEEFTSGRASIEQLVEKLDGPFDAEAFADKGVYDVL IIGGGPAGNSAAIYATRKGLKTGLLAETFGGQVIETVGIENMIGTLYTEGTKLMDQVEEY TKSYDVDIIKSQLATGIEKKELIEVTLANGAVLKSKTAILALGAKWRNINIPGEEEFRNK GVTYCSHFDGPLFEEKNIAVIGGGNSGLEAALDLAGITKHVTVLEFLPELKSDQVLQERA AKTDNLTILKNVATKKFWVKIM >gi|311101838|gb|AEKO01000004.1| GENE 50 52293 - 52583 127 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 93 211 303 306 53 34 5e-32 MTGLRYVERDTNEEKHLNLEGVFVRIGLVPSTAWLKYSGIELNERQDIIVDKFGSTNISG IFAAGDYTDSAYKQIIISMGSSATNAIGAFDYLIRQ >gi|311101838|gb|AEKO01000004.1| GENE 51 52917 - 53462 700 181 aa, chain - ## HITS:1 COG:SP1546 KEGG:ns NR:ns ## COG: SP1546 COG0431 # Protein_GI_number: 15901389 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Streptococcus pneumoniae TIGR4 # 2 181 30 209 209 266 75.0 1e-71 MKNILFIVGSLRKGSFNHQLAEEAEKMLADKANVSYLDYSKVPVFNQDLESPVLPVLAEV REQVLAADAIWIFSPVYNFSIPGPVKNLLDWLSRALDLSDPSGPSALQDKIVTVSSVANG GHNQLFDAYKELLPFIRTQVVGDFTATRVNDTAWVDGKFVATEEVLESLQNQAEALIEAI K >gi|311101838|gb|AEKO01000004.1| GENE 52 53549 - 53977 517 142 aa, chain - ## HITS:1 COG:SPy1960 KEGG:ns NR:ns ## COG: SPy1960 COG1846 # Protein_GI_number: 15675758 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 142 1 142 142 146 54.0 1e-35 MSDLDKNIAVKSMVVMRKAFRTIDSKVSETFKEFNLTPTQFGVMDVLNAKGRMKIGELID RMLATSGNMTVVIKNMEKKGWLIRKACQTDKRAFEIDLTDEGRRIIKAAIPPHQRAIEET FSVLSPDEQSQLVELLKKFKNV >gi|311101838|gb|AEKO01000004.1| GENE 53 54110 - 54340 284 76 aa, chain - ## HITS:1 COG:SP0279 KEGG:ns NR:ns ## COG: SP0279 COG2261 # Protein_GI_number: 15900213 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 76 1 76 76 87 64.0 4e-18 MIGSMIVGFLIGLIASAISNRGERMGCIGKTFVGWLGAFVGQLLFGNWGPMLADTAIVPS VLGAVILLALFWNRNS >gi|311101838|gb|AEKO01000004.1| GENE 54 54360 - 55601 1425 413 aa, chain - ## HITS:1 COG:SP0278 KEGG:ns NR:ns ## COG: SP0278 COG2309 # Protein_GI_number: 15900212 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Streptococcus pneumoniae TIGR4 # 1 411 1 411 413 696 83.0 0 MVLPHFKENLEKYAKLLVANGINVQPGHTVALSIDVEQAELAHLLVKEAYALGAAEVIVQ WSDDIINRERFLHADMDRIEEVPDYKKAEMEYLLAKKASRLGVRSSDPGALNGVAPERLS AHAKATGVAFKPMQVATQSNKVSWTVAAAAGKEWAKKVFPDASSDEEAVDLLWDQIFKTC RVYEEDPVHAWKEHADRLDAKARILNEAQFLDLHYTAPGTDLTLGLPKNHVWESAGAINT QGEGFLPNMPTEEVFTAPDFRRADGYVSSTKPLSYNGNIIEGIKVTFKDGEIVDITADQG DEVMKNLVFNNNGARALGECALVADPSPISQSGITFFNTLFDENASNHLAIGAAYATSVE GGADMTEEELKAAGLNRSDVHVDFMIGSSQMDIDGIRQDGSRVPIFRNGDWVI >gi|311101838|gb|AEKO01000004.1| GENE 55 55765 - 60159 3243 1464 aa, chain - ## HITS:1 COG:SPy1961 KEGG:ns NR:ns ## COG: SPy1961 COG2176 # Protein_GI_number: 15675759 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Streptococcus pyogenes M1 GAS # 1 1464 1 1465 1465 2280 75.0 0 MFNKFQLLLKQIRFPEDHDAFKEIKDGSIETVKLFKSKRQWFFVFSFPSVLSYESFTLFD SLLHSSFNSLGAKAFFEIRLVTTACDDSLLGDYFSYALDSLKVSHFSIYSLFSNLDVEIS NNSIIVKAPEHIIKENLQDRFISLISKSLSQVGLSDVSISVVEDKVASSSFEEAYQTNKV FLQEQAESQARQALQSILESVPAPKPVSEPSQNFAEKQSQRQASFDKAEITPMVDINSEE NRVVFEGYIFDVEQRETKTGRIIINFKVTDYTSSFVMQRWVKDSDELAKFDMIKKANWVR VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMSTMDAMPTVEEL IDTAASWGHPAVAITDHANVQSFPHGYHRAKKAGIKAIFGLEANLVEDKVPIVYNSQNLE LKEATYVVFDVETTGLSAVHNDLIQIAASKMHKGNIVEQFDEFIDPGHPLSAFTTELTGI TDNHVKGAKPLVQVLQEFQEFCQGTVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLE FARNLYPEYKRHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFDKHGLTNLEQ LNTELVSEDSYKKSRVKHATLYVQNQTGLKNIFKLVSLSNVSYFEGVARIPRTVLDEYRE GIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPPAIYAPLIAKDLIKDEAAIEQ LIRDLIEVANRLDKPVLATGNVHYINPEDAIYREIIVRALGQGAMINRPIGKGENAKPAP LPEAHFRTTNEMLDDFAFLGKDLAYKIVVTNTQAMADQIEEVEVVKKDLYTPFIDRAEEQ VAEMTYAKAFELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS RGSVGSSFVATMIGITEVNPMPPHYLCPKCQHSEFITDGSYGSGFDLPDKECSECGTEYK KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT AYGFVKGYERDYNKFYRDAEVDRLAMGAAGVKRNTGQHPGGIVVIPNYMDVYDFTPVQYP ADDVTAAWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKL FSGTEILGVTPEQIGTSTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWL GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKISEEERNG YIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRA KAFELKTMSAGLNAVKTRMEDIKEKRQRNEATNVENDLFTTLEIVNEMLERGFTFGQLDL YKSQATEFLIEGDTLIPPFIALEGLGENVAKQVVAAREEGEFLSKTELRKRGGLSSTLVE KLDEMGILGNMPEDNQLSLFDDFF >gi|311101838|gb|AEKO01000004.1| GENE 56 60132 - 60332 146 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRWFESSYPSYTLPAWRNWQTRWTQNPVSARTCRFDPGRRYMLHSLRSVFLSIGVYFLCL INFSFS >gi|311101838|gb|AEKO01000004.1| GENE 57 60531 - 60755 238 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|76798491|ref|ZP_00780727.1| ## NR: gi|76798491|ref|ZP_00780727.1| hypothetical protein SAJ_0157 [Streptococcus agalactiae 18RS21] # 5 60 1 55 145 84 87.0 3e-15 MPVTMEGEGFEPPNPKERIYSPPRLASSLPFQNINKWRETESNRRHMELQSIALPTELPS QIAGAGFEPTTFGL >gi|311101838|gb|AEKO01000004.1| GENE 58 60677 - 60889 96 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|19747365|gb|AAL96904.1| ## NR: gi|19747365|gb|AAL96904.1| hypothetical protein spyM18_0084 [Streptococcus pyogenes MGAS8232] # 1 39 49 87 87 74 89.0 2e-12 MEDYPSPAEGNGLENRQACKSVRGFESHILLIINAGWSSSVARRAHNPKVVGSNPAPAIW LGSSVGRAMD Prediction of potential genes in microbial genomes Time: Sun May 29 18:23:03 2011 Seq name: gi|311101497|gb|AEKO01000005.1| Streptococcus vestibularis F0396 ctg1126932565724, whole genome shotgun sequence Length of sequence - 327102 bp Number of predicted genes - 338, with homology - 334 Number of transcription units - 161, operones - 82 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 838 - 897 2.1 1 1 Tu 1 . + CDS 1017 - 1199 162 ## COG2801 Transposase and inactivated derivatives - Term 1282 - 1333 1.2 2 2 Op 1 24/0.000 - CDS 1379 - 2341 1174 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 2404 - 2463 5.6 - Term 2416 - 2442 -1.0 3 2 Op 2 2/0.059 - CDS 2499 - 4658 2153 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 4687 - 4746 3.7 - Term 4707 - 4744 0.0 4 2 Op 3 . - CDS 4749 - 4973 317 ## COG0695 Glutaredoxin and related proteins - Prom 5026 - 5085 7.2 + Prom 5219 - 5278 10.1 5 3 Op 1 3/0.029 + CDS 5305 - 7968 2919 ## COG1048 Aconitase A 6 3 Op 2 4/0.029 + CDS 7970 - 9028 914 ## COG0372 Citrate synthase 7 3 Op 3 . + CDS 9107 - 10282 1152 ## COG0538 Isocitrate dehydrogenases + Prom 10429 - 10488 13.0 8 4 Op 1 25/0.000 + CDS 10544 - 10807 471 ## COG1925 Phosphotransferase system, HPr-related proteins 9 4 Op 2 1/0.324 + CDS 10812 - 12545 2180 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 12555 - 12587 1.1 + Prom 12550 - 12609 6.7 10 5 Tu 1 . + CDS 12764 - 14197 1712 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 14231 - 14266 3.5 + Prom 14214 - 14273 5.2 11 6 Op 1 1/0.324 + CDS 14312 - 15139 866 ## COG2819 Predicted hydrolase of the alpha/beta superfamily 12 6 Op 2 . + CDS 15191 - 15931 675 ## COG4947 Uncharacterized protein conserved in bacteria 13 6 Op 3 . + CDS 15977 - 17140 1459 ## smi_1350 hypothetical protein + Term 17147 - 17203 11.7 - Term 17145 - 17180 4.3 14 7 Tu 1 . - CDS 17225 - 18274 1011 ## COG0513 Superfamily II DNA and RNA helicases - Prom 18483 - 18542 6.3 + Prom 18279 - 18338 9.2 15 8 Op 1 . + CDS 18366 - 19001 855 ## COG0572 Uridine kinase 16 8 Op 2 . + CDS 19038 - 20957 1816 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 20967 - 21021 1.6 + Prom 21089 - 21148 5.8 17 9 Op 1 . + CDS 21171 - 21890 394 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 18 9 Op 2 . + CDS 21887 - 24442 1714 ## COG2898 Uncharacterized conserved protein + Term 24457 - 24489 4.0 - Term 24435 - 24483 14.2 19 10 Op 1 10/0.000 - CDS 24494 - 25282 942 ## COG3442 Predicted glutamine amidotransferase 20 10 Op 2 . - CDS 25282 - 26625 1441 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 26678 - 26737 8.0 + Prom 26637 - 26696 7.1 21 11 Op 1 7/0.000 + CDS 26727 - 27578 723 ## COG1624 Uncharacterized conserved protein 22 11 Op 2 6/0.000 + CDS 27575 - 28540 878 ## COG4856 Uncharacterized protein conserved in bacteria + Prom 28594 - 28653 8.3 23 11 Op 3 . + CDS 28761 - 30113 1829 ## COG1109 Phosphomannomutase 24 11 Op 4 . + CDS 30116 - 30556 501 ## COG2246 Predicted membrane protein + Term 30564 - 30622 6.2 + Prom 30570 - 30629 7.4 25 12 Op 1 9/0.000 + CDS 30655 - 31341 811 ## COG2384 Predicted SAM-dependent methyltransferase 26 12 Op 2 . + CDS 31331 - 32119 803 ## COG0327 Uncharacterized conserved protein 27 12 Op 3 2/0.059 + CDS 32132 - 32413 336 ## COG0428 Predicted divalent heavy-metal cations transporter 28 12 Op 4 1/0.324 + CDS 32480 - 33571 1157 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 33644 - 33684 3.5 + Prom 33714 - 33773 7.1 29 13 Op 1 13/0.000 + CDS 33802 - 34671 1142 ## COG1209 dTDP-glucose pyrophosphorylase 30 13 Op 2 11/0.000 + CDS 34671 - 35264 636 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Prom 35387 - 35446 3.1 31 13 Op 3 . + CDS 35470 - 36516 1153 ## COG1088 dTDP-D-glucose 4,6-dehydratase + Term 36520 - 36566 3.1 + Prom 37095 - 37154 3.0 32 14 Tu 1 . + CDS 37349 - 37639 191 ## str1239 hypothetical protein + Term 37679 - 37719 7.0 + Prom 37762 - 37821 6.1 33 15 Op 1 . + CDS 37842 - 38570 735 ## SGO_0227 putative lipoprotein + Term 38577 - 38612 4.4 + Prom 38572 - 38631 2.9 34 15 Op 2 2/0.059 + CDS 38666 - 39802 1235 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 35 15 Op 3 2/0.059 + CDS 39803 - 40546 672 ## COG3884 Acyl-ACP thioesterase 36 15 Op 4 3/0.029 + CDS 40548 - 41321 1014 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 37 15 Op 5 . + CDS 41311 - 41955 505 ## COG4478 Predicted membrane protein 38 15 Op 6 . + CDS 41958 - 42698 946 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Term 42703 - 42738 5.1 + Prom 42734 - 42793 3.0 39 16 Op 1 . + CDS 42860 - 43543 636 ## GALLO_1119 putative exopolysaccharide biosynthesis related protein 40 16 Op 2 . + CDS 43479 - 43781 282 ## COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase + Prom 43783 - 43842 4.0 41 17 Tu 1 . + CDS 43882 - 44151 276 ## GALLO_1118 hypothetical protein + Term 44156 - 44196 6.5 42 18 Op 1 24/0.000 + CDS 44531 - 45289 794 ## COG0107 Imidazoleglycerol-phosphate synthase 43 18 Op 2 4/0.029 + CDS 45286 - 45624 261 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 44 18 Op 3 . + CDS 45633 - 45947 489 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase + Term 46065 - 46105 2.0 - Term 46048 - 46099 10.2 45 19 Op 1 . - CDS 46102 - 46785 627 ## GALLO_0739 hypothetical protein 46 19 Op 2 . - CDS 46778 - 47557 870 ## GALLO_0738 hypothetical protein 47 20 Op 1 . + CDS 47932 - 49149 1467 ## SSA_2340 hypothetical protein 48 20 Op 2 . + CDS 49183 - 50205 955 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 50285 - 50333 -1.0 49 21 Tu 1 . + CDS 50984 - 51310 368 ## LEUM_1747 YG repeat-containing glycosyl hydrolase family 70 protein + Prom 51558 - 51617 3.7 50 22 Op 1 . + CDS 51649 - 51960 303 ## GALLO_1055 putative glucosyltransferase 51 22 Op 2 . + CDS 52059 - 52280 167 ## gi|228476889|ref|ZP_04061534.1| glucosyltransferase-I + Term 52413 - 52458 -0.8 + Prom 52438 - 52497 7.8 52 23 Tu 1 . + CDS 52523 - 53950 1090 ## COG0772 Bacterial cell division membrane protein + Term 53954 - 53994 6.7 + Prom 53986 - 54045 6.5 53 24 Op 1 . + CDS 54070 - 55308 1430 ## COG2262 GTPases 54 24 Op 2 . + CDS 55301 - 55942 535 ## str1227 hypothetical protein 55 24 Op 3 4/0.029 + CDS 55974 - 56903 992 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III 56 24 Op 4 . + CDS 56903 - 57670 736 ## COG0300 Short-chain dehydrogenases of various substrate specificities 57 24 Op 5 . + CDS 57747 - 58151 432 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 58153 - 58195 7.2 + Prom 58319 - 58378 4.2 58 25 Op 1 7/0.000 + CDS 58438 - 60672 2087 ## COG0608 Single-stranded DNA-specific exonuclease + Prom 60691 - 60750 7.8 59 25 Op 2 1/0.324 + CDS 60787 - 61305 756 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 61319 - 61357 4.4 + Prom 61388 - 61447 9.2 60 26 Op 1 1/0.324 + CDS 61476 - 62420 863 ## COG1897 Homoserine trans-succinylase + Term 62423 - 62481 -0.8 61 26 Op 2 6/0.000 + CDS 62491 - 63189 530 ## COG3935 Putative primosome component and related proteins 62 26 Op 3 . + CDS 63189 - 63833 341 ## COG0177 Predicted EndoIII-related endonuclease + Term 63834 - 63870 2.1 63 27 Tu 1 . + CDS 64180 - 64716 400 ## stu1219 hypothetical protein + Term 64750 - 64783 3.1 + Prom 64731 - 64790 8.0 64 28 Op 1 14/0.000 + CDS 64948 - 66231 1352 ## COG1570 Exonuclease VII, large subunit 65 28 Op 2 22/0.000 + CDS 66221 - 66436 369 ## COG1722 Exonuclease VII small subunit 66 28 Op 3 3/0.029 + CDS 66436 - 67308 844 ## COG0142 Geranylgeranyl pyrophosphate synthase 67 28 Op 4 6/0.000 + CDS 67301 - 68128 859 ## COG1189 Predicted rRNA methylase 68 28 Op 5 8/0.000 + CDS 68115 - 68561 380 ## COG1438 Arginine repressor 69 28 Op 6 . + CDS 68570 - 70240 1403 ## COG0497 ATPase involved in DNA repair 70 28 Op 7 2/0.059 + CDS 70310 - 71146 638 ## COG1307 Uncharacterized protein conserved in bacteria + Term 71170 - 71198 -0.0 + Prom 71153 - 71212 4.8 71 29 Op 1 3/0.029 + CDS 71462 - 72013 416 ## COG2755 Lysophospholipase L1 and related esterases 72 29 Op 2 2/0.059 + CDS 72087 - 72575 461 ## COG4698 Uncharacterized protein conserved in bacteria + Prom 72599 - 72658 6.3 73 30 Op 1 . + CDS 72712 - 72987 175 ## PROTEIN SUPPORTED gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 + Term 72990 - 73031 8.3 74 30 Op 2 . + CDS 73046 - 73246 280 ## STER_1174 hypothetical protein + Term 73272 - 73304 -0.2 - Term 73244 - 73302 6.6 75 31 Tu 1 . - CDS 73304 - 74239 1030 ## COG0167 Dihydroorotate dehydrogenase - Prom 74465 - 74524 7.9 + Prom 74395 - 74454 6.0 76 32 Tu 1 . + CDS 74495 - 75187 890 ## COG0588 Phosphoglycerate mutase 1 + Term 75299 - 75338 -0.0 77 33 Op 1 11/0.000 + CDS 75535 - 77091 1764 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 78 33 Op 2 . + CDS 77110 - 78147 1266 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 79 33 Op 3 . + CDS 78152 - 78433 161 ## COG3326 Predicted membrane protein 80 33 Op 4 30/0.000 + CDS 78464 - 79846 1507 ## COG0065 3-isopropylmalate dehydratase large subunit 81 33 Op 5 . + CDS 79856 - 80446 541 ## COG0066 3-isopropylmalate dehydratase small subunit + Prom 80456 - 80515 6.4 82 33 Op 6 . + CDS 80543 - 81328 949 ## str1199 hypothetical protein + Term 81350 - 81382 3.1 + Prom 81396 - 81455 6.0 83 34 Tu 1 3/0.029 + CDS 81481 - 84591 2588 ## COG0587 DNA polymerase III, alpha subunit + Prom 84595 - 84654 10.4 84 35 Op 1 12/0.000 + CDS 84684 - 85703 1229 ## COG0205 6-phosphofructokinase 85 35 Op 2 . + CDS 85773 - 87275 1816 ## COG0469 Pyruvate kinase + Term 87343 - 87377 5.3 - Term 87236 - 87269 2.2 86 36 Tu 1 . - CDS 87333 - 88130 410 ## COG3464 Transposase and inactivated derivatives 87 37 Op 1 . + CDS 89618 - 89908 275 ## 88 37 Op 2 . + CDS 89985 - 90767 756 ## str1193 surface-associated protein CshA precursor, truncated 89 38 Tu 1 . + CDS 90872 - 91090 131 ## gi|228476394|ref|ZP_04061088.1| surface-associated protein CshA + Prom 91186 - 91245 6.7 90 39 Tu 1 . + CDS 91274 - 91495 276 ## str1191 hypothetical protein + Term 91508 - 91543 3.1 + Prom 91547 - 91606 5.6 91 40 Op 1 9/0.000 + CDS 91631 - 92632 1143 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 92 40 Op 2 13/0.000 + CDS 92644 - 93513 1021 ## COG4120 ABC-type uncharacterized transport system, permease component 93 40 Op 3 1/0.324 + CDS 93510 - 94268 224 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 94306 - 94342 4.3 + Prom 94276 - 94335 7.7 94 41 Tu 1 2/0.059 + CDS 94447 - 96108 2283 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 96199 - 96227 1.0 + Prom 96118 - 96177 1.8 95 42 Tu 1 . + CDS 96244 - 97026 784 ## COG0627 Predicted esterase + Prom 97031 - 97090 4.2 96 43 Op 1 . + CDS 97145 - 97864 561 ## COG5549 Predicted Zn-dependent protease 97 43 Op 2 . + CDS 97877 - 98248 217 ## STER_1149 hypothetical protein + Term 98315 - 98349 5.3 98 44 Tu 1 . - CDS 98305 - 99561 542 ## COG3464 Transposase and inactivated derivatives - Prom 99665 - 99724 4.0 + Prom 99496 - 99555 7.5 99 45 Op 1 . + CDS 99752 - 100195 621 ## COG0716 Flavodoxins 100 45 Op 2 1/0.324 + CDS 100246 - 101781 1460 ## COG0038 Chloride channel protein EriC + Term 101794 - 101829 -0.3 101 45 Op 3 1/0.324 + CDS 101855 - 102127 404 ## COG1605 Chorismate mutase 102 45 Op 4 2/0.059 + CDS 102137 - 102925 674 ## COG0038 Chloride channel protein EriC 103 45 Op 5 1/0.324 + CDS 102937 - 103362 361 ## COG0038 Chloride channel protein EriC + Prom 103364 - 103423 3.1 104 45 Op 6 . + CDS 103490 - 103837 575 ## PROTEIN SUPPORTED gi|55821188|ref|YP_139630.1| 50S ribosomal protein L19 + Term 103909 - 103978 26.3 + TRNA 103887 - 103961 61.0 # Arg CCT 0 0 + Prom 103888 - 103947 77.0 105 46 Tu 1 . + CDS 104096 - 104581 337 ## SDEG_1987 hypothetical protein + Term 104595 - 104623 -0.0 - Term 104898 - 104924 -1.0 106 47 Tu 1 . - CDS 104934 - 105110 287 ## STER_1141 hypothetical protein - Prom 105158 - 105217 7.5 + Prom 105085 - 105144 7.0 107 48 Op 1 . + CDS 105186 - 106085 925 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 108 48 Op 2 2/0.059 + CDS 106144 - 106629 491 ## PROTEIN SUPPORTED gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 109 48 Op 3 . + CDS 106629 - 108281 1645 ## COG2812 DNA polymerase III, gamma/tau subunits + Term 108285 - 108309 -1.0 + Prom 108439 - 108498 4.2 110 49 Tu 1 . + CDS 108557 - 108742 157 ## STER_1137 hypothetical protein + Term 108787 - 108829 -0.2 - Term 108497 - 108534 3.0 111 50 Tu 1 . - CDS 108729 - 109667 842 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 109720 - 109779 8.7 112 51 Tu 1 . + CDS 109945 - 111138 1765 ## COG0192 S-adenosylmethionine synthetase + Term 111175 - 111212 3.4 113 52 Tu 1 . + CDS 111498 - 112511 966 ## COG1087 UDP-glucose 4-epimerase + Prom 112536 - 112595 2.2 114 53 Op 1 . + CDS 112698 - 112934 221 ## str1168 hypothetical protein 115 53 Op 2 . + CDS 113002 - 114273 1633 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 116 53 Op 3 . + CDS 114275 - 114463 239 ## STER_1122 competence-associated protein + Term 114467 - 114501 4.3 117 54 Tu 1 . + CDS 114525 - 115406 654 ## STER_1121 competence associated membrane nuclease + Term 115416 - 115445 2.1 - Term 115440 - 115480 5.5 118 55 Op 1 17/0.000 - CDS 115482 - 116132 781 ## COG0765 ABC-type amino acid transport system, permease component 119 55 Op 2 31/0.000 - CDS 116144 - 116842 809 ## COG0765 ABC-type amino acid transport system, permease component 120 55 Op 3 16/0.000 - CDS 116860 - 117693 922 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 121 55 Op 4 34/0.000 - CDS 117705 - 118472 561 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 118516 - 118575 7.7 - Term 118618 - 118657 7.7 122 56 Op 1 17/0.000 - CDS 118659 - 119309 754 ## COG0765 ABC-type amino acid transport system, permease component 123 56 Op 2 31/0.000 - CDS 119321 - 120019 820 ## COG0765 ABC-type amino acid transport system, permease component 124 56 Op 3 16/0.000 - CDS 120037 - 120870 887 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 125 56 Op 4 . - CDS 120880 - 121647 562 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 121688 - 121747 5.6 126 57 Op 1 8/0.000 + CDS 121934 - 122641 832 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 127 57 Op 2 3/0.029 + CDS 122634 - 123974 1099 ## COG5002 Signal transduction histidine kinase 128 57 Op 3 . + CDS 123980 - 124792 796 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I + Term 124809 - 124843 2.2 129 58 Tu 1 . + CDS 124853 - 125212 304 ## COG2832 Uncharacterized protein conserved in bacteria + Term 125228 - 125261 -0.5 - Term 125215 - 125250 0.4 130 59 Op 1 1/0.324 - CDS 125267 - 126481 1166 ## COG2348 Uncharacterized protein involved in methicillin resistance 131 59 Op 2 . - CDS 126483 - 127292 996 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 127322 - 127381 5.8 + Prom 127389 - 127448 5.7 132 60 Op 1 . + CDS 127471 - 128334 628 ## COG0456 Acetyltransferases 133 60 Op 2 . + CDS 128409 - 128795 294 ## PROTEIN SUPPORTED gi|149007043|ref|ZP_01830712.1| 50S ribosomal protein L19 + Term 128953 - 129009 1.8 + Prom 128948 - 129007 13.2 134 61 Tu 1 . + CDS 129060 - 131744 3087 ## COG0474 Cation transport ATPase + Term 131745 - 131792 5.1 + Prom 131767 - 131826 7.5 135 62 Tu 1 . + CDS 131854 - 132600 796 ## COG0778 Nitroreductase + Term 132651 - 132690 2.9 - Term 132594 - 132623 0.5 136 63 Op 1 . - CDS 132626 - 133267 352 ## COG1409 Predicted phosphohydrolases 137 63 Op 2 . - CDS 133279 - 133482 78 ## str1147 hypothetical protein - Prom 133558 - 133617 4.2 + Prom 133506 - 133565 6.6 138 64 Tu 1 . + CDS 133603 - 134694 944 ## COG1600 Uncharacterized Fe-S protein 139 65 Op 1 4/0.029 + CDS 134865 - 135845 979 ## COG1186 Protein chain release factor B 140 65 Op 2 28/0.000 + CDS 135918 - 136625 254 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 141 65 Op 3 . + CDS 136618 - 137547 1006 ## COG2177 Cell division protein + Term 137559 - 137589 2.0 + Prom 137586 - 137645 4.5 142 66 Op 1 2/0.059 + CDS 137703 - 138185 458 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 143 66 Op 2 5/0.000 + CDS 138195 - 139373 1047 ## COG0628 Predicted permease 144 66 Op 3 . + CDS 139363 - 140592 1329 ## COG0457 FOG: TPR repeat + Term 140623 - 140679 -0.6 + Prom 140636 - 140695 8.5 145 67 Tu 1 . + CDS 140715 - 141272 597 ## COG0681 Signal peptidase I + Term 141284 - 141340 16.3 + Prom 141390 - 141449 5.1 146 68 Op 1 . + CDS 141478 - 142701 1122 ## COG2195 Di- and tripeptidases 147 68 Op 2 . + CDS 142758 - 143258 300 ## str1138 pore-forming peptide, putative 148 69 Tu 1 . - CDS 143242 - 143439 161 ## COG1141 Ferredoxin - Prom 143459 - 143518 3.0 + Prom 143403 - 143462 4.9 149 70 Op 1 . + CDS 143485 - 144114 241 ## PROTEIN SUPPORTED gi|148997664|ref|ZP_01825228.1| hypothetical protein CGSSp11BS70_02114 150 70 Op 2 1/0.324 + CDS 144136 - 144804 570 ## COG0283 Cytidylate kinase + Term 144924 - 144958 4.3 + Prom 144867 - 144926 2.6 151 71 Op 1 36/0.000 + CDS 144974 - 145504 433 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 152 71 Op 2 46/0.000 + CDS 145543 - 145743 342 ## PROTEIN SUPPORTED gi|228477493|ref|ZP_04062129.1| ribosomal protein L35 153 71 Op 3 . + CDS 145800 - 146159 594 ## PROTEIN SUPPORTED gi|55821143|ref|YP_139585.1| 50S ribosomal protein L20 + Term 146167 - 146197 2.0 - Term 146155 - 146183 1.6 154 72 Op 1 2/0.059 - CDS 146224 - 147213 438 ## COG3464 Transposase and inactivated derivatives 155 72 Op 2 . - CDS 147255 - 147479 113 ## COG3464 Transposase and inactivated derivatives - Prom 147506 - 147565 3.4 + Prom 147414 - 147473 6.7 156 73 Op 1 . + CDS 147609 - 148094 454 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 148115 - 148174 3.6 157 73 Op 2 . + CDS 148344 - 148688 256 ## GALLO_0903 hypothetical protein + Term 148720 - 148770 15.1 - Term 148717 - 148748 3.4 158 74 Tu 1 . - CDS 148759 - 148944 315 ## COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog - Prom 148989 - 149048 9.6 + Prom 149090 - 149149 6.0 159 75 Op 1 1/0.324 + CDS 149174 - 150580 1407 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 160 75 Op 2 . + CDS 150620 - 151204 756 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 + Term 151449 - 151495 -0.1 + Prom 151609 - 151668 8.1 161 76 Tu 1 2/0.059 + CDS 151702 - 152382 689 ## COG0120 Ribose 5-phosphate isomerase + Prom 152386 - 152445 9.4 162 77 Op 1 1/0.324 + CDS 152525 - 153718 1395 ## COG1015 Phosphopentomutase 163 77 Op 2 1/0.324 + CDS 153720 - 154262 253 ## COG3797 Uncharacterized protein conserved in bacteria 164 77 Op 3 . + CDS 154282 - 155091 982 ## COG0005 Purine nucleoside phosphorylase 165 77 Op 4 . + CDS 155095 - 156342 589 ## COG0038 Chloride channel protein EriC 166 77 Op 5 . + CDS 156324 - 157052 774 ## COG0518 GMP synthase - Glutamine amidotransferase domain + Prom 157310 - 157369 4.3 167 78 Tu 1 . + CDS 157390 - 158100 764 ## COG0813 Purine-nucleoside phosphorylase + Prom 158349 - 158408 10.2 168 79 Op 1 2/0.059 + CDS 158445 - 159905 1334 ## COG1316 Transcriptional regulator 169 79 Op 2 2/0.059 + CDS 159906 - 160637 467 ## COG4464 Capsular polysaccharide biosynthesis protein 170 79 Op 3 5/0.000 + CDS 160646 - 161338 822 ## COG3944 Capsular polysaccharide biosynthesis protein 171 79 Op 4 1/0.324 + CDS 161348 - 163519 1650 ## COG0489 ATPases involved in chromosome partitioning 172 79 Op 5 25/0.000 + CDS 163552 - 164724 1298 ## COG0438 Glycosyltransferase 173 79 Op 6 . + CDS 164727 - 165875 1120 ## COG0438 Glycosyltransferase 174 79 Op 7 . + CDS 165877 - 166518 439 ## COG3955 Exopolysaccharide biosynthesis protein 175 79 Op 8 . + CDS 166515 - 167483 605 ## BDP_1837 hypothetical protein + Term 167494 - 167540 -0.5 + Prom 167500 - 167559 3.5 176 80 Tu 1 . + CDS 167750 - 168418 154 ## gi|24637448|gb|AAN63722.1|AF454497_11 Eps6J + Prom 168484 - 168543 5.7 177 81 Op 1 . + CDS 168583 - 169737 327 ## LAF_1423 hypothetical protein 178 81 Op 2 1/0.324 + CDS 169734 - 171149 1063 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 179 81 Op 3 . + CDS 171160 - 172260 1392 ## COG0562 UDP-galactopyranose mutase 180 81 Op 4 . + CDS 172257 - 173249 532 ## Shel_12340 hypothetical protein 181 81 Op 5 . + CDS 173260 - 174312 690 ## LAR_1288 hypothetical protein + Term 174313 - 174352 5.4 182 82 Tu 1 . - CDS 174345 - 175340 960 ## gi|228477412|ref|ZP_04062048.1| hypothetical protein STRSA0001_1875 - Prom 175364 - 175423 4.9 + Prom 175320 - 175379 6.0 183 83 Op 1 . + CDS 175509 - 175598 61 ## 184 83 Op 2 4/0.029 + CDS 175605 - 176102 477 ## COG0561 Predicted hydrolases of the HAD superfamily 185 83 Op 3 . + CDS 176129 - 176311 207 ## COG0561 Predicted hydrolases of the HAD superfamily 186 83 Op 4 1/0.324 + CDS 176331 - 176918 436 ## COG0406 Fructose-2,6-bisphosphatase 187 83 Op 5 1/0.324 + CDS 176915 - 177523 478 ## COG0406 Fructose-2,6-bisphosphatase 188 83 Op 6 . + CDS 177520 - 178116 314 ## COG0406 Fructose-2,6-bisphosphatase + Term 178147 - 178184 -0.2 189 83 Op 7 . + CDS 178195 - 179331 869 ## COG0628 Predicted permease 190 84 Op 1 . + CDS 179727 - 179921 118 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 191 84 Op 2 . + CDS 179884 - 180270 456 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 192 84 Op 3 . + CDS 180352 - 180843 605 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 180852 - 180894 4.1 + Prom 180955 - 181014 8.6 193 85 Op 1 . + CDS 181091 - 181369 457 ## str1063 hypothetical protein 194 85 Op 2 . + CDS 181387 - 182964 1238 ## COG0661 Predicted unusual protein kinase 195 85 Op 3 . + CDS 182968 - 183588 516 ## COG2755 Lysophospholipase L1 and related esterases 196 85 Op 4 . + CDS 183585 - 184436 879 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily + Term 184441 - 184470 -0.4 + Prom 184533 - 184592 6.7 197 86 Tu 1 . + CDS 184628 - 185092 390 ## COG1943 Transposase and inactivated derivatives + Term 185156 - 185191 5.6 - Term 185197 - 185227 4.3 198 87 Tu 1 . - CDS 185301 - 185543 68 ## SGO_1585 D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4) - Prom 185572 - 185631 7.4 - Term 185657 - 185693 5.0 199 88 Op 1 . - CDS 185696 - 187042 1708 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 187158 - 187217 5.2 200 88 Op 2 . - CDS 187282 - 188478 687 ## COG0053 Predicted Co/Zn/Cd cation transporters - Prom 188504 - 188563 8.1 + Prom 188463 - 188522 7.5 201 89 Op 1 1/0.324 + CDS 188767 - 189345 477 ## COG0692 Uracil DNA glycosylase 202 89 Op 2 . + CDS 189365 - 190633 1495 ## COG0044 Dihydroorotase and related cyclic amidohydrolases + Term 190651 - 190690 1.0 203 89 Op 3 . + CDS 190707 - 192632 1013 ## SGO_1726 hypothetical protein + Term 192669 - 192707 2.0 204 90 Tu 1 . - CDS 193090 - 193380 324 ## gi|228477378|ref|ZP_04062014.1| putative membrane protein - Prom 193531 - 193590 4.7 + Prom 193519 - 193578 4.1 205 91 Op 1 28/0.000 + CDS 193729 - 194700 1232 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 206 91 Op 2 24/0.000 + CDS 194725 - 195723 1301 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit + Prom 195754 - 195813 4.1 207 91 Op 3 30/0.000 + CDS 195971 - 197341 1544 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes + Term 197442 - 197494 8.0 + Prom 197432 - 197491 3.2 208 91 Op 4 . + CDS 197520 - 199268 806 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 199280 - 199313 2.2 + Prom 199444 - 199503 5.4 209 92 Tu 1 . + CDS 199531 - 203058 3367 ## SGO_2013 putative N-acetylmuramidase/lysin + Term 203120 - 203168 9.4 - Term 203108 - 203154 4.3 210 93 Tu 1 2/0.059 - CDS 203252 - 203932 373 ## COG3464 Transposase and inactivated derivatives 211 94 Tu 1 . - CDS 204058 - 204282 129 ## COG3464 Transposase and inactivated derivatives - Prom 204428 - 204487 3.8 + Prom 204498 - 204557 7.7 212 95 Op 1 . + CDS 204581 - 205072 350 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 213 95 Op 2 9/0.000 + CDS 205021 - 205485 609 ## COG2822 Predicted periplasmic lipoprotein involved in iron transport 214 95 Op 3 1/0.324 + CDS 205491 - 206696 1131 ## COG2837 Predicted iron-dependent peroxidase 215 95 Op 4 . + CDS 206674 - 208359 1677 ## COG0672 High-affinity Fe2+/Pb2+ permease 216 95 Op 5 . + CDS 208346 - 209074 456 ## COG0805 Sec-independent protein secretion pathway component TatC 217 95 Op 6 . + CDS 209087 - 209275 338 ## str1020 sec-independent protein translocase protein TatA, putative + Term 209367 - 209412 0.2 - Term 209613 - 209659 8.1 218 96 Op 1 2/0.059 - CDS 209662 - 210798 1472 ## COG3839 ABC-type sugar transport systems, ATPase components 219 96 Op 2 20/0.000 - CDS 210814 - 211650 836 ## COG3833 ABC-type maltose transport systems, permease component 220 96 Op 3 19/0.000 - CDS 211650 - 213008 1194 ## COG1175 ABC-type sugar transport systems, permease components - Term 213063 - 213098 0.7 221 96 Op 4 . - CDS 213124 - 214371 1567 ## COG2182 Maltose-binding periplasmic proteins/domains - Prom 214400 - 214459 13.1 + Prom 214450 - 214509 7.9 222 97 Tu 1 . + CDS 214557 - 215558 951 ## COG1609 Transcriptional regulators + Term 215581 - 215618 7.3 + Prom 215725 - 215784 11.6 223 98 Op 1 7/0.000 + CDS 215811 - 217310 1752 ## COG1640 4-alpha-glucanotransferase 224 98 Op 2 . + CDS 217312 - 219573 2580 ## COG0058 Glucan phosphorylase + Term 219593 - 219633 1.7 225 99 Tu 1 . - CDS 219816 - 220319 150 ## COG2826 Transposase and inactivated derivatives, IS30 family - Prom 220423 - 220482 6.2 226 100 Tu 1 . + CDS 220787 - 221776 1221 ## COG0095 Lipoate-protein ligase A + Term 221777 - 221836 -0.8 227 101 Tu 1 . - CDS 221780 - 221977 90 ## - Prom 222034 - 222093 3.6 + Prom 221977 - 222036 5.8 228 102 Tu 1 . + CDS 222060 - 223130 1031 ## COG0582 Integrase - Term 223246 - 223282 3.3 229 103 Tu 1 . - CDS 223292 - 225832 2583 ## COG0308 Aminopeptidase N - Prom 225891 - 225950 6.0 - Term 225900 - 225939 3.0 230 104 Op 1 32/0.000 - CDS 225966 - 226622 800 ## COG0704 Phosphate uptake regulator 231 104 Op 2 7/0.000 - CDS 226648 - 227406 202 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 232 104 Op 3 41/0.000 - CDS 227419 - 228222 270 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 233 104 Op 4 38/0.000 - CDS 228233 - 229117 931 ## COG0581 ABC-type phosphate transport system, permease component 234 104 Op 5 39/0.000 - CDS 229107 - 230021 860 ## COG0573 ABC-type phosphate transport system, permease component 235 104 Op 6 1/0.324 - CDS 230024 - 230899 677 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 230962 - 231021 10.5 - Term 230951 - 230985 -0.8 236 105 Tu 1 2/0.059 - CDS 231025 - 232335 1057 ## COG0144 tRNA and rRNA cytosine-C5-methylases - Prom 232355 - 232414 1.5 - Term 232345 - 232396 -0.4 237 106 Op 1 2/0.059 - CDS 232416 - 233183 589 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 238 106 Op 2 3/0.029 - CDS 233173 - 233454 356 ## COG4476 Uncharacterized protein conserved in bacteria 239 106 Op 3 1/0.324 - CDS 233447 - 233860 259 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 240 106 Op 4 12/0.000 - CDS 233931 - 234842 405 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 241 106 Op 5 . - CDS 234839 - 235720 1033 ## COG0130 Pseudouridine synthase - Prom 235756 - 235815 5.4 - Term 235758 - 235797 2.1 242 107 Op 1 . - CDS 235841 - 237187 765 ## COG2461 Uncharacterized conserved protein 243 107 Op 2 . - CDS 237189 - 237422 269 ## SMU.1152c hypothetical protein - Prom 237448 - 237507 8.6 - Term 237431 - 237475 -0.1 244 108 Tu 1 . - CDS 237511 - 238131 746 ## COG0732 Restriction endonuclease S subunits - Prom 238193 - 238252 5.5 245 109 Op 1 . - CDS 238259 - 238546 213 ## COG2077 Peroxiredoxin 246 109 Op 2 . - CDS 238534 - 238752 195 ## COG2077 Peroxiredoxin 247 109 Op 3 . - CDS 238816 - 239571 468 ## COG0561 Predicted hydrolases of the HAD superfamily - Term 239580 - 239607 0.1 248 109 Op 4 1/0.324 - CDS 239632 - 240912 1505 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 240937 - 240996 6.6 - Term 241002 - 241028 -1.0 249 110 Tu 1 . - CDS 241033 - 243342 2206 ## COG0210 Superfamily I DNA and RNA helicases - Prom 243368 - 243427 4.8 250 111 Tu 1 . + CDS 243851 - 245194 1266 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Prom 245219 - 245278 4.9 251 112 Tu 1 . + CDS 245322 - 246692 1685 ## COG0486 Predicted GTPase + Term 246709 - 246748 3.7 + Prom 246714 - 246773 6.6 252 113 Tu 1 . + CDS 246832 - 247773 369 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 247743 - 247803 2.0 253 114 Tu 1 . - CDS 247927 - 248493 418 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 248672 - 248731 4.3 - Term 248682 - 248717 2.1 254 115 Op 1 9/0.000 - CDS 248733 - 249362 839 ## COG0461 Orotate phosphoribosyltransferase - Prom 249387 - 249446 3.2 - Term 249393 - 249436 -0.9 255 115 Op 2 5/0.000 - CDS 249450 - 250145 903 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 250290 - 250349 8.9 - Term 250193 - 250219 -0.6 256 115 Op 3 13/0.000 - CDS 250382 - 251338 1049 ## COG0167 Dihydroorotate dehydrogenase 257 115 Op 4 . - CDS 251348 - 252151 864 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Prom 252261 - 252320 8.0 258 116 Tu 1 . - CDS 252390 - 252938 583 ## COG0693 Putative intracellular protease/amidase - Prom 252977 - 253036 7.7 259 117 Tu 1 . - CDS 253071 - 253871 899 ## STER_0965 hypothetical protein - Prom 253896 - 253955 8.4 + Prom 254256 - 254315 6.8 260 118 Tu 1 . + CDS 254347 - 256005 1772 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP + Term 256065 - 256114 11.5 261 119 Tu 1 . - CDS 256380 - 256589 207 ## stu0949 hypothetical protein - Prom 256613 - 256672 5.6 + Prom 256569 - 256628 7.0 262 120 Op 1 . + CDS 256673 - 256951 357 ## gi|228477359|ref|ZP_04061995.1| putative membrane protein 263 120 Op 2 . + CDS 257000 - 258352 1049 ## COG0534 Na+-driven multidrug efflux pump 264 121 Tu 1 . - CDS 258495 - 258821 324 ## str0944 hypothetical protein + Prom 259087 - 259146 8.8 265 122 Tu 1 . + CDS 259169 - 259804 449 ## COG0546 Predicted phosphatases + Term 259822 - 259858 2.1 - Term 259803 - 259852 7.0 266 123 Tu 1 . - CDS 259864 - 260628 816 ## str0941 phosphorylase Pnp/UDP family protein - Prom 260648 - 260707 7.4 - Term 260744 - 260788 -1.0 267 124 Op 1 3/0.029 - CDS 260830 - 261453 454 ## COG1309 Transcriptional regulator 268 124 Op 2 45/0.000 - CDS 261477 - 262559 900 ## COG0842 ABC-type multidrug transport system, permease component 269 124 Op 3 . - CDS 262561 - 263277 267 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 263382 - 263441 5.8 - Term 263371 - 263404 3.1 270 125 Op 1 . - CDS 263468 - 263635 95 ## gi|228477472|ref|ZP_04062108.1| conserved hypothetical protein 271 125 Op 2 . - CDS 263675 - 264196 487 ## LSL_1401 hypothetical protein - Prom 264310 - 264369 4.0 - Term 264432 - 264462 -0.9 272 126 Tu 1 . - CDS 264579 - 266354 2320 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Term 266659 - 266698 3.3 273 127 Op 1 2/0.059 - CDS 266716 - 268938 1900 ## COG2217 Cation transport ATPase 274 127 Op 2 1/0.324 - CDS 268949 - 269320 303 ## COG4633 Uncharacterized protein conserved in bacteria 275 127 Op 3 . - CDS 269336 - 269734 327 ## COG3682 Predicted transcriptional regulator - Prom 269771 - 269830 8.5 - Term 270135 - 270180 1.3 276 128 Op 1 . - CDS 270198 - 271235 1285 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 277 128 Op 2 . - CDS 271307 - 272212 645 ## COG1230 Co/Zn/Cd efflux system component - Prom 272265 - 272324 4.0 + Prom 272183 - 272242 6.9 278 129 Op 1 . + CDS 272310 - 272885 402 ## COG1309 Transcriptional regulator 279 129 Op 2 . + CDS 272902 - 273225 72 ## gi|228477458|ref|ZP_04062094.1| conserved hypothetical protein + Term 273261 - 273301 5.0 - Term 273248 - 273287 5.2 280 130 Op 1 3/0.029 - CDS 273318 - 274190 747 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 281 130 Op 2 . - CDS 274192 - 275028 840 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 282 130 Op 3 . - CDS 275040 - 276044 1107 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 283 130 Op 4 . - CDS 276121 - 276552 322 ## COG1959 Predicted transcriptional regulator - Prom 276585 - 276644 9.1 284 131 Tu 1 . + CDS 277147 - 278403 529 ## COG3464 Transposase and inactivated derivatives - Term 278423 - 278483 4.1 285 132 Op 1 15/0.000 - CDS 278499 - 279299 254 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 286 132 Op 2 34/0.000 - CDS 279286 - 280122 304 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 287 132 Op 3 . - CDS 280098 - 280889 153 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 288 132 Op 4 . - CDS 280889 - 281491 452 ## SGO_0917 hypothetical protein - Prom 281704 - 281763 9.1 - Term 281703 - 281745 3.3 289 133 Tu 1 . - CDS 281806 - 282606 567 ## COG0384 Predicted epimerase, PhzC/PhzF homolog - Prom 282626 - 282685 5.8 290 134 Op 1 12/0.000 - CDS 282717 - 284237 1232 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 291 134 Op 2 . - CDS 284230 - 284958 344 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 292 134 Op 3 . - CDS 284951 - 285805 867 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 293 134 Op 4 . - CDS 285824 - 286273 525 ## COG1846 Transcriptional regulators - Prom 286307 - 286366 6.6 - Term 286361 - 286408 7.9 294 135 Op 1 3/0.029 - CDS 286435 - 287154 768 ## COG3527 Alpha-acetolactate decarboxylase 295 135 Op 2 . - CDS 287170 - 288846 1874 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 288959 - 289018 7.4 - Term 289015 - 289064 6.2 296 136 Op 1 2/0.059 - CDS 289170 - 289409 174 ## COG1943 Transposase and inactivated derivatives 297 136 Op 2 . - CDS 289442 - 289645 79 ## COG1943 Transposase and inactivated derivatives - Prom 289745 - 289804 5.5 - Term 289773 - 289806 3.1 298 137 Tu 1 . - CDS 289808 - 290149 231 ## stu0912 hypothetical protein - Prom 290172 - 290231 5.7 - Term 290516 - 290552 3.4 299 138 Tu 1 . - CDS 290559 - 292391 2315 ## COG0481 Membrane GTPase LepA - Prom 292439 - 292498 8.0 + Prom 292634 - 292693 7.2 300 139 Tu 1 . + CDS 292723 - 293982 914 ## COG3949 Uncharacterized membrane protein + Term 294232 - 294260 -0.1 - Term 293957 - 293987 -0.4 301 140 Op 1 . - CDS 293993 - 294178 194 ## gi|228476754|ref|ZP_04061420.1| hypothetical protein STRSA0001_1383 - Prom 294198 - 294257 3.6 - Term 294218 - 294250 3.1 302 140 Op 2 1/0.324 - CDS 294259 - 295023 226 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 295142 - 295201 6.1 - Term 295190 - 295231 5.4 303 141 Op 1 . - CDS 295234 - 295527 390 ## COG0607 Rhodanese-related sulfurtransferase 304 141 Op 2 . - CDS 295529 - 295942 507 ## COG0105 Nucleoside diphosphate kinase - Prom 296015 - 296074 8.1 + Prom 296026 - 296085 9.0 305 142 Tu 1 . + CDS 296110 - 296595 703 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 296626 - 296666 4.0 306 143 Tu 1 . - CDS 296665 - 298008 1479 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation - Prom 298058 - 298117 2.0 - Term 298080 - 298117 0.1 307 144 Op 1 40/0.000 - CDS 298126 - 299223 543 ## COG0642 Signal transduction histidine kinase - Prom 299244 - 299303 3.4 308 144 Op 2 . - CDS 299493 - 300152 450 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 309 144 Op 3 . - CDS 300188 - 301012 546 ## STER_0924 hypothetical protein - Prom 301032 - 301091 5.1 - Term 301080 - 301119 6.1 310 145 Op 1 13/0.000 - CDS 301127 - 303259 2251 ## COG0550 Topoisomerase IA - Prom 303356 - 303415 6.7 - Term 303303 - 303352 2.4 311 145 Op 2 . - CDS 303427 - 304266 621 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Term 304293 - 304327 3.0 312 146 Op 1 . - CDS 304333 - 305253 495 ## COG1940 Transcriptional regulator/sugar kinase 313 146 Op 2 8/0.000 - CDS 305260 - 306030 671 ## COG0164 Ribonuclease HII 314 146 Op 3 . - CDS 306017 - 306871 1041 ## COG1161 Predicted GTPases - Prom 306901 - 306960 4.8 - Term 306905 - 306950 -0.1 315 147 Tu 1 . - CDS 307000 - 307689 782 ## COG2932 Predicted transcriptional regulator - Prom 307714 - 307773 7.0 - Term 307724 - 307763 4.5 316 148 Op 1 . - CDS 307784 - 308272 238 ## COG1827 Predicted small molecule binding protein (contains 3H domain) 317 148 Op 2 . - CDS 308322 - 308849 424 ## STER_0916 hypothetical protein - Prom 308875 - 308934 8.8 - Term 308913 - 308953 3.6 318 149 Op 1 8/0.000 - CDS 308962 - 310524 2105 ## COG0541 Signal recognition particle GTPase 319 149 Op 2 1/0.324 - CDS 310557 - 310889 432 ## COG2739 Uncharacterized protein conserved in bacteria 320 149 Op 3 . - CDS 310955 - 311653 729 ## COG2188 Transcriptional regulators 321 149 Op 4 . - CDS 311680 - 311862 90 ## + Prom 311648 - 311707 9.2 322 150 Tu 1 . + CDS 311822 - 313384 1930 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 313402 - 313438 2.2 - Term 313452 - 313499 5.6 323 151 Tu 1 . - CDS 313590 - 314609 1187 ## COG1064 Zn-dependent alcohol dehydrogenases - Prom 314639 - 314698 7.2 324 152 Op 1 . - CDS 314771 - 315052 176 ## smi_1775 hypothetical protein 325 152 Op 2 . - CDS 315030 - 315338 113 ## smi_1776 hypothetical protein 326 152 Op 3 . - CDS 315404 - 316819 849 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 316846 - 316905 7.5 - Term 316885 - 316928 7.1 327 153 Op 1 16/0.000 - CDS 316932 - 317615 688 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 317710 - 317769 2.2 328 153 Op 2 34/0.000 - CDS 317795 - 318424 419 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 329 153 Op 3 1/0.324 - CDS 318433 - 319074 775 ## COG0765 ABC-type amino acid transport system, permease component - Prom 319101 - 319160 14.6 - Term 319202 - 319251 2.8 330 154 Tu 1 . - CDS 319274 - 319606 451 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism - Prom 319631 - 319690 7.5 - Term 319669 - 319709 9.2 331 155 Tu 1 . - CDS 319716 - 321524 2357 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 321609 - 321668 6.5 + Prom 321571 - 321630 4.9 332 156 Tu 1 . + CDS 321730 - 322638 704 ## COG0583 Transcriptional regulator + Term 322742 - 322793 6.9 333 157 Op 1 11/0.000 - CDS 322736 - 322954 243 ## COG2801 Transposase and inactivated derivatives - Prom 322976 - 323035 3.0 334 157 Op 2 . - CDS 323046 - 323339 263 ## COG2801 Transposase and inactivated derivatives - Term 323797 - 323848 6.2 335 158 Tu 1 . - CDS 323868 - 324581 839 ## COG1705 Muramidase (flagellum-specific) - Prom 324601 - 324660 10.7 + Prom 324674 - 324733 11.0 336 159 Tu 1 . + CDS 324754 - 325761 881 ## COG2855 Predicted membrane protein + Term 325764 - 325810 11.6 + Prom 325767 - 325826 7.0 337 160 Tu 1 . + CDS 325929 - 326174 238 ## COG3464 Transposase and inactivated derivatives + Prom 326203 - 326262 4.1 338 161 Tu 1 . + CDS 326307 - 326633 312 ## COG3547 Transposase and inactivated derivatives + Term 326842 - 326886 2.2 Predicted protein(s) >gi|311101497|gb|AEKO01000005.1| GENE 1 1017 - 1199 162 60 aa, chain + ## HITS:1 COG:SPy1336 KEGG:ns NR:ns ## COG: SPy1336 COG2801 # Protein_GI_number: 15675275 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 59 209 267 268 84 72.0 7e-17 MKAFFCILKSKMFYGYEKTFKSLEQLEQVIVDYIDYYNNKRIEVKLKGLSPVQYRTKSFA >gi|311101497|gb|AEKO01000005.1| GENE 2 1379 - 2341 1174 320 aa, chain - ## HITS:1 COG:SPy1378 KEGG:ns NR:ns ## COG: SPy1378 COG0208 # Protein_GI_number: 15675308 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 319 1 319 319 573 92.0 1e-163 METYYKAINWNEIEDAIDKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSAKEKDLVGKVFG GLTLLDTMQSQTGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEI FEWTNSNKYLQTKAKIINDIYENGTPLQKKVASTYLETFLFYSGFFTPLYYLGNNKLANV AEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTKSLY DGVGWTEEVMTFLRYNANKALMNLGQDPLFPDSANDVNPIVMNGISTGTSNHDFFSQVGN GYLLGTVEAMQDDDYNYGLK >gi|311101497|gb|AEKO01000005.1| GENE 3 2499 - 4658 2153 719 aa, chain - ## HITS:1 COG:SPy1375 KEGG:ns NR:ns ## COG: SPy1375 COG0209 # Protein_GI_number: 15675307 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 719 1 719 719 1286 87.0 0 MSLKNLGDVSYFRLNNEINRPVNGQIPLHKDKEALRAFFLENVKPNSMVFNSITDKINYL IENDYIESEFIGKYEPAFIEKLSADIHTQKFRFQSFMAAYKFYQQYALKTNDGESYLESI EDRVLFNALYFADGDENLASDLANEMIHQRYQPATPSFLNAGRSRRGELVSCFLIQVTDD MNSIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGYAGAASGVVPVMKLFEDSFSYSN QLGQRQGAGVVYLDVFHPDILAFLSTKKENADEKVRVKTLSLGVTVPDKFYELARNNEDM YLFSPYSVEKEYGKPYNYIDITAMYDELVANPNITKTKINARELETEISKLQQESGYPYI VNVDTANRYNPIDGKIVMSNLCSEILQVQTPSELNDAQEFVKLGTDISCNLGSTNILNMM TSPDFGRSIKAMTRALTFVTDSSSIDAVPSIKNGNQQAHTFGLGAMGLHSYLAKHHIEYG SPESVEFTNIYFMLMNYWTLVESNNIARERQETFVGFENSKYADGSYFDKYVTGQYVPKS DRIKELFEGHFIPQAKDWEELRELVKKDGLYHQNRLAVAPNGSISYINDCSASIHPITQR IEERQEKKIGKIYYPANSLSTDTIPFYTSAYDMDMRKVIDVYAAATEHVDQGLSLTLFLR SELPKEIYEWKTENKQTTRDLSILRNYAFNKGIKSIYYIRTYTDDGEEVGSNQCESCVI >gi|311101497|gb|AEKO01000005.1| GENE 4 4749 - 4973 317 74 aa, chain - ## HITS:1 COG:SPy1374 KEGG:ns NR:ns ## COG: SPy1374 COG0695 # Protein_GI_number: 15675306 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Streptococcus pyogenes M1 GAS # 4 74 2 72 72 116 78.0 1e-26 MAKITLFSKNNCMQCKMTKKFLEKEGADFEEINIDEQPEKIDYVKSLGFTAAPVIEAGDS VFSGFQPAKLKEIL >gi|311101497|gb|AEKO01000005.1| GENE 5 5305 - 7968 2919 887 aa, chain + ## HITS:1 COG:lin1682 KEGG:ns NR:ns ## COG: lin1682 COG1048 # Protein_GI_number: 16800750 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Listeria innocua # 6 885 10 900 900 1120 61.0 0 MQEYCSNLTVNGKTFSFYDLEKAAKSYDVKVGELPYSIRILLESLLRKKDGADVKESHIS DLIKFPNFPTISEVPFKPSRVILQDFTGVPVVVDLASMRDAIVSNGGKAELINPEIPVDL VIDHSVQVDSYGCDTALEDNINLEFKRNNERYEFLKWAEQSFENYRAVPPATGIIHQVNI EFLSDVIIEKNGLLYPDSMFGTDSHTTMINGIGVLGWGVGGIEAEAAMLGEASYFPIPEV IGVHLTGELPKIATATDLALKVTQVLRSENVVGKFVEYFGSGLKNLSLADRATVANMAPE YGATCGYFPIDDETLNYMRLTNRDEEHIQVTEAYTKANHLFYDPSKEVKYTKIVEIDLST IKPSISGPKRPQDLILLSDAKQEFQDAVVREAGVRGFGLDNEELEKTAKVDFEDHSETIQ TGHVAIAAITSCTNTSNPYVLMAAGLLAKKAVEKGLEVSPTVKTSLAPGSKVVTGYLKAS GLQSYLDKLGFNLVGYGCTTCIGNSGDLRPEVAKAIVDKDLLASAVLSGNRNFEGRINPL VKANFLASPPLVVAYALAGNTNIDLTTEPLGFDDNGQAVYLEDIMPSRDEIEAYVDKYVT RQLFRDEYASVFSDSEKWNAIPTEHRQNYKWNQKSTYIQNPPYFDALGDDLTIKPLNNLK VLAKFGDTVTTDHISPAGNIARNSPAAVYLSENGVDYQEFNSYGSRRGNHEVMMRGTFAN IRIKNELAEGKIGGYTKYDGDILPIYDAAMKYKEANRDTLVIAGKDYGMGSSRDWAAKGA NLLGVKVVLAESFERIHRSNLVMMGILPVQFMEGENAESLGLTGHETFSFDLSENPGVHD VITVTASTPEQTKTFKALVRFDADADIRYYKNGGILPMVVRKKLKGA >gi|311101497|gb|AEKO01000005.1| GENE 6 7970 - 9028 914 352 aa, chain + ## HITS:1 COG:lin1602 KEGG:ns NR:ns ## COG: lin1602 COG0372 # Protein_GI_number: 16800670 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Listeria innocua # 8 349 6 347 373 419 58.0 1e-117 MTTVEINGLKDMIACNTRISSIIDDHLSYSGYDISEFMDNKASFEEVIYLLWNGHLPTQM ELKYFEAELRKNYDISDAVEQCILIQSRPHLHPMSVLRSTVSLLGVYNVDAEERSMEAIY QQSIELMAKLPTIITTFARLRTGKMPLKPRKDLGFAANFLYMLNGVEPSEIEVEAMNKAL ILHADHELNASTFAARVCASTLTDIYSCVTTAIGALKGPLHGGANERVFDMLKEIRESGD VNAYLQEKLDSKEKIMGFGHRVYKKQDPREIFLRDMAKKLTEGTENEEFFNMSQEIEEFM KEKKGLIPNVDFYSATVYHTLGIDSDIFTLIFAMSRVAGWIAHIQEQQKITN >gi|311101497|gb|AEKO01000005.1| GENE 7 9107 - 10282 1152 391 aa, chain + ## HITS:1 COG:BS_citC KEGG:ns NR:ns ## COG: BS_citC COG0538 # Protein_GI_number: 16079965 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Bacillus subtilis # 2 391 4 422 423 491 58.0 1e-138 MAEKIVMKNGQLQVSDHPIIPFIEGDGVGHDIWKNAQAIFDKAVEVAYEGNRHIEWQELL AGKKAYDKTGEWLPKETLEAIRESLVAIKGPLETPVGGGIRSLNVALRQELDLYACVRPV RYFDGVASPLKEPEKTNITIFRENTEDIYAGIEWEAGTTDVKRVIEFLQTEMNVSKIRFP ESSSIGIKPISIEGSKRLIRSAIDYALKNNLKKVTLVHKGNIQKFTEGGFRKWGYEVAQE DYKEELMDGRLEINDIIADNFLQQILLNPEKFDVVALTNLNGDYASDALAAQVGGIGISP GANINYQTGHAIFEATHGTAPDIANQDKANPCSVLLSGCMLLEYIGWSEAAQLIKSAIEE TFKDDIFTADLAFGKQEYSTSAFSNQILSIM >gi|311101497|gb|AEKO01000005.1| GENE 8 10544 - 10807 471 87 aa, chain + ## HITS:1 COG:L120335 KEGG:ns NR:ns ## COG: L120335 COG1925 # Protein_GI_number: 15672099 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Lactococcus lactis # 1 87 1 87 88 125 90.0 1e-29 MASKDFHIVAETGIHARPATLLVQTASKFASDITLDYKGKAVNLKSIMGVMSLGVGQGAD VTISAEGADADDAISAIAETMTKEGLA >gi|311101497|gb|AEKO01000005.1| GENE 9 10812 - 12545 2180 577 aa, chain + ## HITS:1 COG:SP1176 KEGG:ns NR:ns ## COG: SP1176 COG1080 # Protein_GI_number: 15901041 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Streptococcus pneumoniae TIGR4 # 1 577 1 577 577 992 91.0 0 MTEMLKGIAASDGVAVAKAYLLVQPDLSFETVTVEDTSAEEARLDAALAASQDELSVIRE KAVESLGEEAAAVFDAHLMVLADPEMTGQIKETIRAKQVNAEAALTEVTNMFIAIFEGME DNPYMQERAADIRDVTKRVLANLLGKKLPNPATIDEESIVVAHDLTPSDTAQLNKKFVKA FVTNIGGRTSHSAIMARTLEIAAVLGTNNITELVKDGDILAVSGITGEVVINPTEEQIAE FKAAGEAYAKQKAEWAQLKDAQTVTADGKHFELAANIGTPKDVEGVNDNGAEAVGLYRTE FLYMDSQDFPTEEDQYEAYKAVLEGMNGKPVVVRTMDIGGDKELPYFDLPKEMNPFLGYR ALRISISETGNQMFRTQLRALLRASVHGKLRIMFPMVALLTEFRTAKGILEEEKAKLVAE GVAVADDIEVGIMIEIPAAAMLADQFAKEVDFFSIGTNDLIQYTMAADRMNEQVSYLYQP YNPSILRLINNVIKAAHAEGKWAGMCGEMAGDQTAVPLLVGMGLDEFSMSATSVLRTRSL MKKLDTAKMEEYANRALTECSTMEEVLELSKEYVNVD >gi|311101497|gb|AEKO01000005.1| GENE 10 12764 - 14197 1712 477 aa, chain + ## HITS:1 COG:SPy1371 KEGG:ns NR:ns ## COG: SPy1371 COG1012 # Protein_GI_number: 15675303 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 474 1 474 475 737 80.0 0 MAKQYKNYVNGEWKTSENSITIYAPANGEELGSVPAMSQAEVDEVYAAAKAALPAWRALS YAERAAYLHKAADILERDAEKIGQVLSKEISKGLKSAIGEVVRTAEIIHYAAEEGLRLEG EVLEGGAFDAGSKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGDVVAFKPPT QGSISGLLLVEAFVEAGIPAGVLNSITGRGSVIGDYIVEHKAVDFINFTGSTPVGENIGR LAAMRPIMLELGGKDAAIVLEDADLDLTAKNIVAGAFDYSGQRCTAIKRVLVMDSVADEL VEKVTALVGNITVGMPEESASVTPLIDTKAADFVQGLIDDAVEQGATAKTELKREGNLIY PVVFDHVTTDMRLAWEEPFGPVLPFIRVSSVEEAIKISNESEFGLQGAVFTQDYPRAFAI AEQLEVGTVHINNKTQRGTDNFPFLGVKGSGAGTQGVKYSIEAMTRVKSTVFDVTNY >gi|311101497|gb|AEKO01000005.1| GENE 11 14312 - 15139 866 275 aa, chain + ## HITS:1 COG:SP0882 KEGG:ns NR:ns ## COG: SP0882 COG2819 # Protein_GI_number: 15900765 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 274 1 274 274 457 79.0 1e-129 MNKSYFYLVMKTHELEVPYTGKLRRVRVLLPKNYETDTDRSYPVVYFHDGQNVLYSKESF SGYSWKIIPTIKRNPDISRMIVVAIDNDGPARMNEYSAWKYQESNIPGVQFGGKGVEYAE FVMDVVKPFIDKEYRTLPDRQHTAMIGSSLGGNITQFMGLDYKDQIGCLGVFSSANWLHQ EAFDRYISRQDLDANQRVYIYVGTEEADDTDKTLMAGNIKQAYIDSSLRYYHDLIDRGVD LENIKIHIQSGAEHNEEAWAENLPDCLRFFAENWE >gi|311101497|gb|AEKO01000005.1| GENE 12 15191 - 15931 675 246 aa, chain + ## HITS:1 COG:SP0884 KEGG:ns NR:ns ## COG: SP0884 COG4947 # Protein_GI_number: 15900767 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 112 246 1 135 135 246 87.0 4e-65 MNTEHLSHWSGQLNREMYVNRYGHAGIPIVVFASSGGSHNEYYDFGMIDACARFIEEGRL QFFTLSSVDSESWLCDWKNPHDRAEMHRAYERYVIEEAIPYIKHKTGWFDPMMTTGCSMG AYHALNFFLQHPDVFNKVVALSGVYDARFFVGEFGGDEAIYQNSPSDYIWNQNDGWFIDR YRQAEIVVCTGLGAWEQDGLPSYYKLKEAFEQKNIPAWFSEWGHDVAHDWEWWRKQMPYF LDNMNL >gi|311101497|gb|AEKO01000005.1| GENE 13 15977 - 17140 1459 387 aa, chain + ## HITS:1 COG:no KEGG:smi_1350 NR:ns ## KEGG: smi_1350 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 386 1 386 388 676 87.0 0 MNYLVISPYYPQNFQQFTVELANKGITVLGIGQEPYEQLDQSLKDALTEYFRVDNLENLD EVKRAVAFLFYKHGPIDRIESHNEYWLELDAALREQFNVFGAKPEDLKKTKFKSEMKKLF QKAGVPVVPGAVIKTDEDVDKAVKEIGLPMIAKPDNGVGAAATFKLETEDDINHFKAEWD RETVYFFEKFVNSSEICTFDGLVDRNGNIVFSTTFDYAHTPLDLMIYKMDNSYYVLKEMD PKLRKYGEAIVKEFGMKERFFHIEFFRDGDDYIAIEYNNRPAGGFTIDVYNYAHSIDLYK GYADIVAGDPFPGSHFEPLYCLATSRRASSYYAYSEEELFDKYRKQLKVKKIMPAAFAEL QGDYLYMLTTPSREEMEQMIEDFGKKA >gi|311101497|gb|AEKO01000005.1| GENE 14 17225 - 18274 1011 349 aa, chain - ## HITS:1 COG:SPy1369 KEGG:ns NR:ns ## COG: SPy1369 COG0513 # Protein_GI_number: 15675301 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 349 1 346 361 511 73.0 1e-145 MFKNFPEQWQDLLKEKGITTETAIQKELFAPITEGDNVLGISPTGTGKTLAYLLPLLLSL KPQKAQQLLILAPNSELAGQIFDVTKQWAEPLGLTAQLFLSGSSQKRQIERLKKGPEILI GTPGRVFELIKLKKIKMMNVNTIVLDEFDELLSDSQYHFVTKISHHVPRDHQMIYISATN KIDDQDLIENTIVYDLSDQKLDTIKHYYISVDKRNRVELLRKFSNIPDFRGLVFFNSLSD LGATEERLQFNGASAVSLASDINVKFRKVILEKFKNHEISLLLGTDLLARGIDIENLEVV INFDIPRDREAYTHRAGRTGRMGNEGSVISLVTHPEDLKKLKNSLKFQK >gi|311101497|gb|AEKO01000005.1| GENE 15 18366 - 19001 855 211 aa, chain + ## HITS:1 COG:SP1208 KEGG:ns NR:ns ## COG: SP1208 COG0572 # Protein_GI_number: 15901071 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Streptococcus pneumoniae TIGR4 # 23 211 23 211 212 312 86.0 3e-85 MPKKPIIIGVTGGSGGGKTSVSRAILSNFPDEKIAMIEHDSYYKDQSHLTFEERVSTNYD HPFAFDTDLMIEHINELIAGRPVDIPIYDYTQHTRSDKTYRQEPQDVFIVEGILVLEDKR LRDLMDIKLFVDTDDDIRIIRRIKRDMEERGRSLDSIIEQYISVVKPMYHQFIEPTKRYA DVVIPEGVTNTVAIDLINTKVASILEESKKA >gi|311101497|gb|AEKO01000005.1| GENE 16 19038 - 20957 1816 639 aa, chain + ## HITS:1 COG:SPy1025 KEGG:ns NR:ns ## COG: SPy1025 COG0488 # Protein_GI_number: 15675024 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 639 1 635 635 926 78.0 0 MIILQGNKIERSFSGDVLFDNINIQVDERDRIALVGRNGAGKSTLLKILVGEEAPTSGDI NTKRDLNLSYLAQDSRFESSKTIYAEMLNVFADLRADENRLRDMEMKMADLTGADLDKLM TDYDRLSEDFRQRGGFTYESDIKAILNGFKFDESMWEMSISELSGGQNTRLALAKMLLEK PELLVLDEPTNHLDIETIAWLENYLVNYQGALIIVSHDRYFLDKVATVTLDLTKHSLDRY VGNYSKFMDLKAEKLATEAKNFEKQQKEIAKLEDFVNRNIVRASTTKRAQARRKQLEKME RLDKPTEGQKSANMTFHADKVSGNVVLTVRDAAIGYDDEILSEPISLDVKKMDAIAIVGP NGIGKTTFIKSVVGKLPFIKGTSTYGANVEVGYYDQTQSALTPSNTVLDELWNDFATTPE VEIRNRLGAFLFSGDDVKKSVSMLSGGEKARLLLAKLSMENNNFLILDEPTNHLDIDSKE VLENALIDFDGTLLFVSHDRYFINRVATKVMEISEEGATIYLGDYDYYLEKKAELEELAR LEAEENQGPEETQVASAGASDYQAQKASQKEIRKLSRRIEQIENELETIEERLGEISVAM LETNEVAELSDLQKELDDLSVNQEALMEEWSDLSEQLES >gi|311101497|gb|AEKO01000005.1| GENE 17 21171 - 21890 394 239 aa, chain + ## HITS:1 COG:SMc04308 KEGG:ns NR:ns ## COG: SMc04308 COG0596 # Protein_GI_number: 15965715 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Sinorhizobium meliloti # 6 223 30 256 271 95 30.0 7e-20 MEFKVKDGQIIYYRDLGKGFPIVFLHGNNLSGNYFGKQGILYRDYRLIFIDSRNHGRSSR QSAKMTFEQMAADLEEILQFLNIKKALFVGHSDGANLAMVYASRFPDRIAGLLLNAGNMT FKGLTRRSRFLVYIQYYCLKALSPFSSKMDIMAQITELMLHDLPLDRERLHQASYPVWVV MGQRDVISISHSRDISDLFPIHKLYVERRQGHRLAQRKYKVFNQMIRELVRISRKEVVA >gi|311101497|gb|AEKO01000005.1| GENE 18 21887 - 24442 1714 851 aa, chain + ## HITS:1 COG:lin1803_2 KEGG:ns NR:ns ## COG: lin1803_2 COG2898 # Protein_GI_number: 16800871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 249 839 1 589 613 352 33.0 3e-96 MKRLIERLQPLKTAVKSIFFISITVLVVVELVRLKRTITLESLESALSGLSIWHLALMVV IGLVAVSPMLFYDLILNRELETDFSKSYILETSWAVNTINNLAGFAGLVDVGLRYSFYSE DGQEKSGVKALSRLLPYFMSGLSLLSGLVFATFWFFPLSPDLRKYWLLLLGIFLYLPFIF FISSREKLAYFGQVPLKTRLSLLLASTAEWGTALGSFVSVAYLMGLHVPLYNLIPLYFLA VIIGIFSMIPGGIGSFDLIVITGLTSMGVSNALAVSLLLLFRLTYYIIPFLLGVVFFFKH MGGHINEKYFKIPSRVFGGSFHRILVYLLRFLGIFLILSALIPERLANVYFINRFDPIQE QLIWQFPSILFGTLFVFMARLIRRRVKGAFIASLVTFVLALIYVNLNGISWAMSFLIVLS LVLMLIIRKRLYHRYFVYSWEDKTKDFLFLAFTILVLLVLGGSGFWSHLLPPRNRDVLGH FVHIWFDILLGSVIIATIVWVVLRVLAPRKHFGQSMDNERFTALLEKYGGASESALAYLH DKRLFWYRVDGQDQVVFQFAQTSNKCVIMGNPIGNEIYYRPAWEAFLKNLSDWNLQALFY EADESVTLMLHDYGFDFMKFGENAMVDLTTFSVDGKHGKKFRKPTNRVEKAGFQFKLLNP PFSETQMQEMKAVSDIWLNGRKEKGFSLGFFDEAYLQQAPIAIVESEEGDIVAFANIMPT QNKQVATIDLMRYDFEKAPEGIMDYLFVKLFQYFQAEDKKYFDMGMAPLANVGTEEDSFL EEKVANLVYIFAQRFYSFSGLQRYKEKFSPIWSPKYIVYPKRTWLLFDMIAILRIDNRKI EDKMKKRRLWK >gi|311101497|gb|AEKO01000005.1| GENE 19 24494 - 25282 942 262 aa, chain - ## HITS:1 COG:SPy1034 KEGG:ns NR:ns ## COG: SPy1034 COG3442 # Protein_GI_number: 15675031 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 262 1 262 263 414 81.0 1e-116 MTYTSLKSPENRDYTYDLNVAHLYGNLLNTYGDNGNVLMIKYVGEKLGAKMTFDIVSVGD YFDKDYYDMVFFGGGQDYEQSIVAKDLPSKRDAIGQFIQDNKVLLAICGGFQLLGQYYVQ ANGVRIDGIGVMGHYTLNQENNRYIGDIKIHNEEFNETYYGFENHQGRTFLSDDEKPLGK VVYGNGNNKEDGTEGVHYKNVYGSYFHGPILSRNANLAYRLVTTALRNKYGQDIQLPSYD DILSSEIAEEYADTKSKAEFEK >gi|311101497|gb|AEKO01000005.1| GENE 20 25282 - 26625 1441 447 aa, chain - ## HITS:1 COG:SPy1035 KEGG:ns NR:ns ## COG: SPy1035 COG0769 # Protein_GI_number: 15675032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 3 446 1 444 445 743 80.0 0 MTMKTTMGVLAGKASHLVLSKLGRGSTLPGKIALKFDKDILDTLAKDYEIVVVTGTNGKT LTTALTVGILKEAFGEIVTNPSGANMITGITSTFLTAKKANSGKKIAVLEIDEASLPKIT EYITPSLFVFTNIFRDQMDRYGEIYTTYQMILDGAAKAPAATILANGDSPLFNSKEIVNP VRFYGFDTEKHAPELAHYNTEGIVCPKCESILQYRLNTYANLGDYVCLNCDFHRPELDYK LTQLTKITNTTSEFIIDGQDYKINVGGLYNIYNALAAVSVAEFFGVAPEQIKSGFEKSRA VFGRQETFKIGDKSCTLVLIKNPVGASQALDMIKLADYPFSLSVLLNANYADGIDTSWIW DANFESILDMDIPEINAGGVRHSEIARRLRVTGYPEDKITQAEKLEDIMTLIEKQDCDHA YILATYTAMLEFRDILAQRHVVGKEMN >gi|311101497|gb|AEKO01000005.1| GENE 21 26727 - 27578 723 283 aa, chain + ## HITS:1 COG:SPy1036 KEGG:ns NR:ns ## COG: SPy1036 COG1624 # Protein_GI_number: 15675033 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 283 1 283 283 348 63.0 7e-96 MGILSSIDIDFWRSLFDSPLKVIVNSLDILIVAFLIYRFIRALRGTKIMTLVQGVVLFIL VKLISDFIGFTTISYLMNQVINYGAIAAVVIFAPELRSALETFGRTPQHFLQNKEVSSDE KLVQAYVKAVKYMSPRKIGALVSIEQTQTLQEQIATGIPLDAVVTGELLINIFIPNTPLH DGAVIIRDNKVATACSYLPLTESNKISKEFGTRHRAAIGLSEQTDALTFIVSEETGAISI AYKGNFIHDLSVQEFEQELSLILLKEQEPRQSFFQRWMGGSKK >gi|311101497|gb|AEKO01000005.1| GENE 22 27575 - 28540 878 321 aa, chain + ## HITS:1 COG:SPy1037 KEGG:ns NR:ns ## COG: SPy1037 COG4856 # Protein_GI_number: 15675034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 321 1 318 318 246 46.0 4e-65 MKRFVNFFKNDRLWQMLVALFFAVVLFFTAWSGNTQNKNNSSSASNTFTQTVESVPVDIK YDSDKYFISGYSYDAEVYLTATTQLALTTEATSDTRHFKLVADLSNLGQGTSRVPIQVKN LPAGMSAQVSPSTLTATIGKKASKTFDVVANITQDKLANGYEVKKVSLNETKVEVTSSED IINQIDHVQAVLEGDDNLSDDYDGNLVLQAVSSNGTILASSISPAKVHAKISLRKLSKSV PVKLELTGDKASNVSNISYSFDRGHVTIVGSQEAMDKIDSITVPVDISQVTKDTSKTLEL TAEGVTVQPSTVKVNLKVTQK >gi|311101497|gb|AEKO01000005.1| GENE 23 28761 - 30113 1829 450 aa, chain + ## HITS:1 COG:SPy1038 KEGG:ns NR:ns ## COG: SPy1038 COG1109 # Protein_GI_number: 15675035 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 450 1 450 451 747 88.0 0 MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETGRPKVFVARDTRISGEMLESA LVAGLLSVGIEVYKLGVLATPGVSYLVRTENASAGVMISASHNPALDNGIKFFGGDGFKL DDAREAEIEALLDAAEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVATGLDLGGMKVALDA ANGAAAVSARNIFLDLNAEIAVIGDQPDGLNINAGVGSTHPEQLQALVRETGSAIGLAFD GDSDRLIAVDENGDIVDGDKVMYIIGKYLSQKGELAKNTIVTTVMSNLGFHKALDREGIN KAVTAVGDRYVVEEMRKNGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLTKVMVETGKSLS ELAAEVTIYPQKLVNIRVENSLKDKAMEVPAIAAIIEKMEAEMAGNGRILVRPSGTEPLL RVMAEAPTDDEVNYYVDTIADVVRAEIGLD >gi|311101497|gb|AEKO01000005.1| GENE 24 30116 - 30556 501 146 aa, chain + ## HITS:1 COG:L2829 KEGG:ns NR:ns ## COG: L2829 COG2246 # Protein_GI_number: 15672596 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 2 145 1 144 148 87 37.0 5e-18 MIAKLRAFMATEVFKYLFFGVLATLVYMVSRTFIFQLTQQGTLSAVLANAIAIIFAFFTN DIFVFNQETTGMAMRFVKFVGARLLTLVLDLALAYFLVDTYPEIIGQFVGHSQAWVNGIE SVFAQVLIIVLNYIISKLFVFTGEKV >gi|311101497|gb|AEKO01000005.1| GENE 25 30655 - 31341 811 228 aa, chain + ## HITS:1 COG:SPy0930 KEGG:ns NR:ns ## COG: SPy0930 COG2384 # Protein_GI_number: 15674950 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 228 1 228 228 291 64.0 1e-78 MYVQLSQRLKDVATYVPKGAKLLDVGSDHAYLPIYLLEKGLITSAIAGEVVKGPYESALA NVSASGFQDKIEVRLANGLAAFEYSDAVTTITICGMGGRLIADILDAGKDKLKGVDRLIF QPNNREDDLRIWLMENGFEIIAESIMTENGKYYEIMVAEAGHMSLSDKEVRFGPHLMKDQ SQVFQLKWQREINKLEIALGSIPLANQADRTAIEDKIQTIKEVLNHVS >gi|311101497|gb|AEKO01000005.1| GENE 26 31331 - 32119 803 262 aa, chain + ## HITS:1 COG:SPy0931 KEGG:ns NR:ns ## COG: SPy0931 COG0327 # Protein_GI_number: 15674951 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 262 1 262 262 383 68.0 1e-106 MLASELIKTYEEFCPQEFSMEGDVVGLQIGSLDKEIQKVMVTLDVRENTVAEAIEKGVDL IIAKHAPIFRPVKDLVSSPDRDILLDLVKHDIVVYVSHTNIDVVDDGLNDWFCELLDIKD TTYLTQTSENHGIGRVGDIMPQTIEELALKVKAVFGLDSVRLVRYDHDNPLVSRVAICGG SGQGFYKDALKKGAQVFITGDVYYHTGQEMITNGLLAIDPGHHIEALFIAKIAEKLEAWK REHNWNVTILESQSSTNPFDHL >gi|311101497|gb|AEKO01000005.1| GENE 27 32132 - 32413 336 93 aa, chain + ## HITS:1 COG:MA2881 KEGG:ns NR:ns ## COG: MA2881 COG0428 # Protein_GI_number: 20091703 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Methanosarcina acetivorans str.C2A # 24 93 212 277 277 68 54.0 3e-12 MTWLLHQNVVFLVFLAGLFTWGCTIVGSAIVFFFKNISRKLLDIMMAFTAGAMIFVVTEE LIPESQTNGNTDVATLGLMVGFVVMMVMDVALG >gi|311101497|gb|AEKO01000005.1| GENE 28 32480 - 33571 1157 363 aa, chain + ## HITS:1 COG:SP1608 KEGG:ns NR:ns ## COG: SP1608 COG0665 # Protein_GI_number: 15901448 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Streptococcus pneumoniae TIGR4 # 2 360 3 363 367 432 61.0 1e-121 MKIAIVGAGIVGSTAAYYLSKEKDVEVTVFDHGLGQATKAAAGIISPWFSKRRNKAWYRM ARLGADFYQELTSNLENDGYDTSFYDQSGVALLKKDDSKLDGLYQHAETRLEESPIIGEL SIKNADNLPEFAGFDRYLYASGGARVEGAELTATLINASGFEKVEGPVTLSSLDNGSYEI NCQTFDKVILACGAWLGQTLEPLGFEVDVRPQKGQLRDYFFDGLDTGKLPVLMPEGELDV IPFAGGKISVGASHENDKGFDLTVDEAILEGLEEEAKTYFPDLSTAKSFSERVGTRAYTS DFSPFFGEVPELKNVFVASGLGSSGLTTGPLIGKNLVDLAMNRSGSLDSADYPVTQYVRK KEQ >gi|311101497|gb|AEKO01000005.1| GENE 29 33802 - 34671 1142 289 aa, chain + ## HITS:1 COG:SPy0933 KEGG:ns NR:ns ## COG: SPy0933 COG1209 # Protein_GI_number: 15674953 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Streptococcus pyogenes M1 GAS # 1 289 1 289 289 525 91.0 1e-149 MKGIILAGGSGTRLYPLTRAASKQLMPIYDKPMIYYPLSTLMLAGIKEILIISTPQDLPR FEELLGDGSEFGISLSYAVQPSPDGLAQAFIIGEDFIGDDSVALVLGDNIFHGNGLSAML QRAEAKEKGATVFGYQVKDPERFGVVEFDDNMNAISIEEKPEHPKSNFAVTGLYFYDNDV VEIAKNIKPSPRGELEITDVNKAYLDRGDLSVELMGRGFAWLDTGTHESLLQAAQYIETV QRLQNVQVANLEEIAYRMGYITKEQVLELAQPLKKNEYGQYLLRLIGEA >gi|311101497|gb|AEKO01000005.1| GENE 30 34671 - 35264 636 197 aa, chain + ## HITS:1 COG:L198323 KEGG:ns NR:ns ## COG: L198323 COG1898 # Protein_GI_number: 15672178 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Lactococcus lactis # 1 197 1 197 197 345 86.0 3e-95 MTEQFFGKELAARKIEAIPGLLEFDIPVHGDNRGWFKENFQKEKMLPLGFPKSFFAEGKL QNNVSFSRKNVLRGLHAEPWDKYISVADEGKVLGTWVDLREGETFGKTYQTVIDASKGIF VPRGVANGFQVLSDKVAYSYLVNDYWALELKPKYAFVNYADPSLDIKWENLEEAEVSEAD KNHPLLKDVKPLKAEDL >gi|311101497|gb|AEKO01000005.1| GENE 31 35470 - 36516 1153 348 aa, chain + ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 4 348 2 346 346 662 95.0 0 MTEYKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANIEEILGDRVELVV GDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIYTNFIGTYTLLEAARKYDIRF HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFG VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAI LTKGRIGETYLIGADGEKNNKEVLELILEKMGQPKDAYDRVTDRAGHDLRYAIDSTKLRE ELGWEPQFTNFESGLEETIRWYTDHQDWWKAEKEAVEANYAKTQEVLK >gi|311101497|gb|AEKO01000005.1| GENE 32 37349 - 37639 191 96 aa, chain + ## HITS:1 COG:no KEGG:str1239 NR:ns ## KEGG: str1239 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 93 9 101 107 123 70.0 3e-27 MTTDYDDIDILIVKPLKEYLVDKTGKVGNGKVQKEFARIQKSLKSHGYQGKSVNDIYHDE KGLYYFLVVNGGKRITVLEDGYDHPYSGYLEREGTR >gi|311101497|gb|AEKO01000005.1| GENE 33 37842 - 38570 735 242 aa, chain + ## HITS:1 COG:no KEGG:SGO_0227 NR:ns ## KEGG: SGO_0227 # Name: not_defined # Def: putative lipoprotein # Organism: S.gordonii # Pathway: not_defined # 118 242 97 221 222 112 51.0 1e-23 MKRKVIRVCSLVLLSVAVSIALGGCGSKSEKDTAASSTTSTSKVVKSSAKTQTSEKQSAK KAKTEASKDFQGQKEASAPEASSSKNQATAGNDAQGGTSSSAASESNKSSQATADTQSDA PVPAALVGTWTGTSPQATDISFTVDAEGNITSKANFNVDYEPYRQSSTTAKAVQISGNLY VWEGGDFSTLLPGITGLGGAGFQAKPGFILKNGTYTPVQFISDLGPTFDYSNYNAFPFSL TK >gi|311101497|gb|AEKO01000005.1| GENE 34 38666 - 39802 1235 378 aa, chain + ## HITS:1 COG:SPy1040 KEGG:ns NR:ns ## COG: SPy1040 COG0635 # Protein_GI_number: 15675037 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Streptococcus pyogenes M1 GAS # 1 377 1 376 376 592 77.0 1e-169 MQTKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDDYLSALIREWELLNIKELRTLYIGG GTPTAISAEQLDYLLSNLQKNLDLSKLEEFTIEANPGDLTVDKIEVLKKSAVNRVSLGVQ TFDDKHLRQIGRSHNQAQIYESIDSLKSAGFHNISIDLIYALPGQTMDQVKENVRKALEL DIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFDYIIQELEKKGFEHYEISNFT KPGMESRHNLMYWNNDEYYGVGAGASGYVNGVRYRNRGPIQHYLKAIAEDGHARLHEEHL TKAEMMEEEFFLGLRKKSGVSIKRFEEKFGLSFADTYGDIVKKLQEDGLLVKDPEVVRMT KRGLFLGDSVAEQFILED >gi|311101497|gb|AEKO01000005.1| GENE 35 39803 - 40546 672 247 aa, chain + ## HITS:1 COG:SP1408 KEGG:ns NR:ns ## COG: SP1408 COG3884 # Protein_GI_number: 15901262 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Streptococcus pneumoniae TIGR4 # 1 244 1 242 245 258 52.0 5e-69 MGLKFSIPYQIPFYETDITHQVKLPHLLAFSLQVSGMQSESLGNTDKDVFDKYGLVWIVT DYAIEIDRLPRYNEKVTITTEAISYNKIFCYRNFYITDETGQQIMLFKTTFALMDYETRK VAEVPDEVVAPYGAEKTKKLLRGPRYKVLENPIETLYRVRYFDLDMNGHVNNSKYLEWML DVFDLDFLTKYTPARIDLKYVKEIHHGSEIYSGYEFDQDSLSSQHQICVDGNVHAQAIIQ WKEIGDK >gi|311101497|gb|AEKO01000005.1| GENE 36 40548 - 41321 1014 257 aa, chain + ## HITS:1 COG:SPy1043 KEGG:ns NR:ns ## COG: SPy1043 COG0647 # Protein_GI_number: 15675039 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 252 1 252 254 376 75.0 1e-104 MTYKGYLIDLDGTIYKGKDRIPEGEAFVKELQKRQIPYLFVTNNSMRTPEMVQELLRNQC ELETPLETIYTATLATVDYMNDMNRGKTVYVIGETGLKSAIADAGYTVDEENPAYVVVGL DREVTYEMLVKATLAIHKGAVFIGTNPDLNIPTERGLLPGAGSLLALIEAATRVTPIIIG KPKAIIMNKALEILGTERSQTIVVGDNYLTDITAGIKNDFPTLLVTTGFTKAEEVADLPV KPDHVLASLVEWDFDAN >gi|311101497|gb|AEKO01000005.1| GENE 37 41311 - 41955 505 214 aa, chain + ## HITS:1 COG:SPy1044 KEGG:ns NR:ns ## COG: SPy1044 COG4478 # Protein_GI_number: 15675040 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 12 205 12 205 210 155 45.0 8e-38 MRTKIEAVLTPIWLLALSVLVTIYLAWGFYYFDIDWMHLLDYVIIGKTELWHNFNVLMQY LTFPWVNHLAMPDFPSSESGLKHFHDVKWLFHLVQVLIVLLVYPAVGFIWRNVKKGTFGL YRRLYLSLAVLPILIGVVGLFLGFDQFFILFHEALFPGDSSWLFNPMLDPIINVLPEEYF LQCFVIFFIIYEGLMVSLTWLAHKQVRKFLKNKE >gi|311101497|gb|AEKO01000005.1| GENE 38 41958 - 42698 946 246 aa, chain + ## HITS:1 COG:FN0428 KEGG:ns NR:ns ## COG: FN0428 COG1387 # Protein_GI_number: 19703770 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Fusobacterium nucleatum # 3 242 2 245 258 141 35.0 9e-34 MSIRDNHLHTHHSYDSDANFTDYLTHFDGEIVTTEHYDLSNPYTKQDDVPEYEAYSHEIE NLNLKYGNRIKRGIEIGYYKPRESDILDFLDGKDYDLKLLSIHHNGVNDYLDDEVADMDK ASIIQEYLDKLEYAIGRVDADVLAHFDYGFRLFDVTVDELKAYENQLKRIFQKMIANDLA FELNAKSMYLYHHEDLYRYALGLVKDLGCRKYSIGSDGHKLEHFRLNFDKIQEILREFGI TEDMII >gi|311101497|gb|AEKO01000005.1| GENE 39 42860 - 43543 636 227 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1119 NR:ns ## KEGG: GALLO_1119 # Name: not_defined # Def: putative exopolysaccharide biosynthesis related protein # Organism: S.gallolyticus # Pathway: not_defined # 1 217 1 212 302 247 73.0 2e-64 MKFLKRHAYALLFTLFLMGANVYSLLKVFVIPSAVSTVSANTTSSTTASSTTSTSTGKVT KTDTTYKDDNMDIKITTGKTSDTTYYVADIKLSSADYLKTALAQNTYGTNITETTSSIAQ QNNAIFAINGDYYGANQSGYVIKNGQVYRDTDRNSDYEDLAVYSDGSFKTFKESDTTAQK LVDSGVVNTFAFGPTLVENGKIAVSKNEEVGQAMAQSTYSHRGHRRE >gi|311101497|gb|AEKO01000005.1| GENE 40 43479 - 43781 282 100 aa, chain + ## HITS:1 COG:CAC2630 KEGG:ns NR:ns ## COG: CAC2630 COG4632 # Protein_GI_number: 15895888 # Func_class: G Carbohydrate transport and metabolism # Function: Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase # Organism: Clostridium acetobutylicum # 10 98 263 344 347 69 46.0 2e-12 MKRLVKPWLNPRTAIGVIEESDGSVHYIVIVSDGRTSESSGLTLYEMAELMKSYGVTTAY NLDGGGSSTMYFNGQVINKPTTNGNKISERAVSDIVYIGY >gi|311101497|gb|AEKO01000005.1| GENE 41 43882 - 44151 276 89 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1118 NR:ns ## KEGG: GALLO_1118 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 87 41 127 130 92 54.0 6e-18 MFMRMMFFAPLAGALIYLLTGLGMSWVKTRLSKLLFNSSIAVVASACLVKGIVEVSGRTT SVDMPYWYVAAGLLCLSIMTGFIRPRKLA >gi|311101497|gb|AEKO01000005.1| GENE 42 44531 - 45289 794 252 aa, chain + ## HITS:1 COG:lin0572 KEGG:ns NR:ns ## COG: lin0572 COG0107 # Protein_GI_number: 16799647 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Listeria innocua # 1 251 1 250 251 308 62.0 6e-84 MLKKRIIPCLDVKDGRVVKGVNFVNLTDVGDPVDSARAYYEAGCDELVFLDITATSDNRE TTVDMVRRVADQVFIPFTVGGGIRSVEDMNKMLKAGADKVAINSSALANPQLIADCAQKF GNQCVVAAIDAKKMADGSWHVFVAGGRKDTGRDLIQWVQEVVALGAGEILLTSMDKDGTK SGFDLEMLNRVAEVVDVPIIASGGAGNIEDIVEVFEKTTATGALAASIFHFGEVNIGETK QVLANAGIEVRR >gi|311101497|gb|AEKO01000005.1| GENE 43 45286 - 45624 261 112 aa, chain + ## HITS:1 COG:L0072_1 KEGG:ns NR:ns ## COG: L0072_1 COG0139 # Protein_GI_number: 15673197 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Lactococcus lactis # 7 108 4 106 110 129 60.0 2e-30 MTEVKLDFDKQGGLVPVIVTDYKTGQVLMLAYMNEESYQLTLETKQMHYWSRSRNELWHK GATSGHFQHVKSIKTDCDQDTLLIAVEQEGAACHTGAYSCFFTDIYDDRQDR >gi|311101497|gb|AEKO01000005.1| GENE 44 45633 - 45947 489 104 aa, chain + ## HITS:1 COG:lin0570 KEGG:ns NR:ns ## COG: lin0570 COG0140 # Protein_GI_number: 16799645 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Listeria innocua # 1 103 1 102 103 94 58.0 5e-20 MLETLYKEALDRKKNPKEGSYTNYLFDKGLDKILKKVDEEATEVVIGAKNADKEEIANET ADVLYHLAVMLVEIGVSPEDVEAVLKARQGKQSNVHDRKEVTDY >gi|311101497|gb|AEKO01000005.1| GENE 45 46102 - 46785 627 227 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0739 NR:ns ## KEGG: GALLO_0739 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 3 227 2 226 226 208 52.0 1e-52 MSNLFNSIFNDATATASPLQLMLALLVSLVLGLALTWTYKYRTLYTREFVISLTLLPCLM TLVIFLVNGSLGTSIAVAGTFSLIRFRSATSGSRELIAVFMSMIIGLASGTGYLLLALLF TIFLLAVWLLLENRQSRTDNQRRRLLTINVSHQDLIDQKITKALLNFTSECDLISLNTTG GGETMQLVYEVDLNPQMDDFQLTNHLISSIENCDLALTKKAKKKKNL >gi|311101497|gb|AEKO01000005.1| GENE 46 46778 - 47557 870 259 aa, chain - ## HITS:1 COG:no KEGG:GALLO_0738 NR:ns ## KEGG: GALLO_0738 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 243 1 243 244 253 57.0 4e-66 MVKQLETRFKRIETKYVVSKENLEDLLTDLKEYLVEDDYPTSTISNIYFDTDNFDVIQDA LDGNHRQEKIRMRTYLTNPKIDSKVFLEIKAKDDEGIGHKFRLVSTPLAITNLMTDGKNH GQITDRQLLQDIQHLRQRYDEGLKPRMYIYYDRFSMKEKESIEGYAYNKVRVTLDQNLTY RDEDVSLFKGNHGFSLLDEDTIIMEIKAPGQKPNWLQSILDKHGLEEQKFSKYSCAYHKS QGLDYGPHPVREKGGVTYV >gi|311101497|gb|AEKO01000005.1| GENE 47 47932 - 49149 1467 405 aa, chain + ## HITS:1 COG:no KEGG:SSA_2340 NR:ns ## KEGG: SSA_2340 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 27 376 66 415 434 269 55.0 2e-70 MTACSQSNSQATGTTSSTTSKTSAVTATTSKKTNKNNSNYFTSKDSDTSYNESSASKIKL SGSSADVSGDGVTVSGSTVTISKSGTYVISGKSDGVQIKVDAGDSDDVHIVLDGVTMTNT NAAINATKAGHVYLTLKDGTTSTLSDSSSNNDEDADAVIFSKGDLTINGSGTLNIDAKKN NGIKANDSLHMTGGTYKISSVGDAFNVNDELNITGTTMTIEAEEDGVKVDNDDDTSVGTM YLSDNTMTIKAGDDGIHASGDLIIDSGTYKVEKSTEGIEGKSVTINGGNIDVYATDDGVN AANANASQSEIFFKMTDGTLNVEVGEGDTDPIDSNGDIIVSGGTINLTGQSGFDFDGSAT YTGGDITINGEKQTKIENSMPGGGGPQGDGGPQGGGQPGGFGGGH >gi|311101497|gb|AEKO01000005.1| GENE 48 49183 - 50205 955 340 aa, chain + ## HITS:1 COG:FN1094 KEGG:ns NR:ns ## COG: FN1094 COG0463 # Protein_GI_number: 19704429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 339 4 357 360 210 37.0 3e-54 MYIIIPAYEPDKRLIQVVQDITLKLPKSRIIIVNDGSGPPYDDFYDETALFGATVLKHPI NKGKGAALKTAFAYIQEEVVSQHLSAQPIVTVDSDGQHLIKDIVRVAKATEENPSHLILG ARAFVGKVPARSRFGNKVTAGLFRLVTGQKVTDTQTGLRGMSTDLIPWLINLDGNRFEYE FNMLLEAKKSGYQISEVPIETVYLEENKSSHFRPIRDSIRIYSPFLKFSGTAILASVIDA TVLFVLFTLTKNLLLSVVLARVISASSQCLLNANVVFNPTSSLFRSSVRYFMLVLVLLAC NYFLLSSLVAIGLGLVVAKLLTETLLFLISYRVQHDLVFA >gi|311101497|gb|AEKO01000005.1| GENE 49 50984 - 51310 368 108 aa, chain + ## HITS:1 COG:no KEGG:LEUM_1747 NR:ns ## KEGG: LEUM_1747 # Name: not_defined # Def: YG repeat-containing glycosyl hydrolase family 70 protein # Organism: L.mesenteroides # Pathway: not_defined # 20 108 730 814 1527 87 52.0 1e-16 MRLIMDNKLRTAVLTHLTTRVYYGELYTDDARYMAKQSPYYDAITTLLTNRMKYVSGDQS MKVDSFGGKEILYSVRYGKDIMSADQIRGVETIKHSGLLTLITNDSNF >gi|311101497|gb|AEKO01000005.1| GENE 50 51649 - 51960 303 103 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1055 NR:ns ## KEGG: GALLO_1055 # Name: gtfA # Def: putative glucosyltransferase # Organism: S.gallolyticus # Pathway: not_defined # 2 95 1003 1098 1522 98 54.0 8e-20 MHGKVLDDTSLVNKLYVTKTRSSGDDFQAQYGGAFLDKLQKLYPEIFKEVMEDSGKTIDP SVKIKQRKAKYFNGTTIQKRGFDYVLSDGKLYFNVNNKVPPYQ >gi|311101497|gb|AEKO01000005.1| GENE 51 52059 - 52280 167 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228476889|ref|ZP_04061534.1| ## NR: gi|228476889|ref|ZP_04061534.1| glucosyltransferase-I [Streptococcus salivarius SK126] # 1 72 1118 1189 1599 118 84.0 9e-26 MTYTGKQYHFNDKGYPVTGEQTIDGSYYYFLPNGVMFADGIIKNVKGQSLVYGKSGKLTT QTGWKEVTVKYDK >gi|311101497|gb|AEKO01000005.1| GENE 52 52523 - 53950 1090 475 aa, chain + ## HITS:1 COG:SP0803 KEGG:ns NR:ns ## COG: SP0803 COG0772 # Protein_GI_number: 15900696 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 400 2 399 407 454 62.0 1e-127 MAKSKNTIESRIDYSILLPVLILLLVGLVSVFIATNFDYPKNLVQVISQQVLWIFLGSVL AFVVMLFNTEFLWKVTPWLYIFGLGLMVLPLVFYSPALVASTGAKNWVSIGSVTLFQPSE FMKISYILFLSRIGVWAKQGKEVTELKDDWLLLFQYVAVTLPVLGLLVLQGDMGTALVFL AILAGIIVVSGISWRIILPVVLAFVASVALFIMVFITDWGKEALLKLGVQTYQINRISAW LDPFTYADGIAFQQTQGMVSIGTGGIYGKGFNHLDLNVPVRESDMIFTVIAEDFGLVGGG LVLLTYLFLIYRMLRVTFKSNNRFYTFISTGFIMMIVFHIFENIGAAVGILPLTGIPLPF ISQGGSSLISNLIGVGLVLSMAYQTNLNEENKILLAMSRRMRTSGTSQVKSVSKIKTKKN KPSKSAIKASQELVKAKDKVDKVTEKMRQTISQNTPILHQGKRRKGSKKKPTRKH >gi|311101497|gb|AEKO01000005.1| GENE 53 54070 - 55308 1430 412 aa, chain + ## HITS:1 COG:SPy0922 KEGG:ns NR:ns ## COG: SPy0922 COG2262 # Protein_GI_number: 15674942 # Func_class: R General function prediction only # Function: GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 412 1 412 412 614 78.0 1e-176 MIETAKQQERAILVGVELQETEHFDMSMEELASLAKTAGAEVVASYTQKRERYDSKSFVG SGKLEEIKAMVDADEITTVIVNNRLTPRQNTNLEAAFGVKVIDRMQLILDIFAMRARSHE GKLQVHLAQLKYMLPRLAGQGIMLSRQAGGIGSRGPGESQLELNRRSIRNQIADIERQLK VVEKNRETIREKRVDSSTFKIGLIGYTNAGKSTIMNLMTDDKQYEANELFATLDATTKKI YLKDQFRVTLTDTVGFIQDLPTELVAAFKSTLEESRNVDLLLHVIDASDPNHEEHEKVVL DILKDLDMTDIPRLAIYNKMDVADNLVATVFPNVRLSARDKGSREALRRLLIDEIQQIFE PFSIKVHQEQAYKLYQLSQLALLDSYTFETEVEEITGYISPKNKWKLEEFYD >gi|311101497|gb|AEKO01000005.1| GENE 54 55301 - 55942 535 213 aa, chain + ## HITS:1 COG:no KEGG:str1227 NR:ns ## KEGG: str1227 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 213 1 213 213 385 96.0 1e-106 MTDYMDLALKYGGFTSLDKVYLENTLSDLSDRQKLAFITPPPSVINAYFAEIYQKQSPEA ATDYYLELSKELNLFNPVPSFDEHKPFIRLNLSGKSYGFCYENADEVALVFAEHLEVPTA SILFELAQVFPQYKVYFEGTQIKMAKVDFDEEVLEELTPETQLLSRVTKLKGNVIKLASF NQDELVELLSQYKGQTVFYGFAQRECLAYIVQK >gi|311101497|gb|AEKO01000005.1| GENE 55 55974 - 56903 992 309 aa, chain + ## HITS:1 COG:SP0674 KEGG:ns NR:ns ## COG: SP0674 COG1234 # Protein_GI_number: 15900575 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Streptococcus pneumoniae TIGR4 # 1 309 1 309 309 511 78.0 1e-145 MELQFLGTGAGQPSKARNVSSLVLKLLDEINEVWMFDCGEGTQRQILETTIKPRKVKKIF ITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGPVGIKQYVMTSLRTSGTRLPYHVHFK EIDEHKLGLVMEDDKFAVYADKLDHTIFCIGYRVVQKDLEGTLDAEALKVAGVPFGPLFG QIKNGQDVVLEDGTKIIAKDFISAPKKGKVITILGDTRKTNASVRLGLGADVLVHESTYG KGDEKIAKNHGHSTNMQAAQVAKDASAKRLLLNHVSARFLGRDIGKMAADAKTIFENTHI VRDLEEVEI >gi|311101497|gb|AEKO01000005.1| GENE 56 56903 - 57670 736 255 aa, chain + ## HITS:1 COG:SPy0925 KEGG:ns NR:ns ## COG: SPy0925 COG0300 # Protein_GI_number: 15674945 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Streptococcus pyogenes M1 GAS # 4 255 3 254 254 350 65.0 1e-96 MAKQRIIAITGASGGLAQEIVKQLSPSDGIILLGRDKDKLEKCYRHVENKTCLAIDLRDD NAIKEMVDYLYQRFGRIDVFINNAGFGEFKSYDNYTSQEVRDMFDINTFATMTFSRLMAE KMVEQGHGHIVNIASMAGKIATANSSVYAATKFAVIGFSDALRLELSDKGVYVTTVNPGP IETSFFDQADPSGAYLESVKKFVLSPKYVAKKIVRILGKNKREVNLPRLLSVAHKGYTLF PRISDKLATNVFNYK >gi|311101497|gb|AEKO01000005.1| GENE 57 57747 - 58151 432 134 aa, chain + ## HITS:1 COG:SP0256 KEGG:ns NR:ns ## COG: SP0256 COG0454 # Protein_GI_number: 15900191 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 5 132 6 133 138 135 53.0 3e-32 MLDYRKEIPAMTDLLALYSSVGWTNYTNNPTMLEEAVKASLWQLAVYDEEELVAYIRLVG DGHSVIFVQDLLVRPDYQRQGIGKKLLEEALGTFHNVYQRLLATDRSEKNLAFYQSLGFV ELSEQACTGMIYKY >gi|311101497|gb|AEKO01000005.1| GENE 58 58438 - 60672 2087 744 aa, chain + ## HITS:1 COG:SPy0926_1 KEGG:ns NR:ns ## COG: SPy0926_1 COG0608 # Protein_GI_number: 15674946 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Streptococcus pyogenes M1 GAS # 9 588 1 580 580 836 73.0 0 MTGRKYKNMITSTYDWKINTKEPDAGFFKLAKEHGLAETAAKIAYERGITTEEALEDFLK ADLSHLHDPYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASIVKEALEMMGAEA RVYLPNRFTDGYGPNESVYKYFIEQEGISLIVTVDNGVAGNEAIAYAQEQGVDVIVTDHH SMPAQLPDAYAIVHPEHPDADYPFKYLAGCGVAFKLATALLETIPTEMLDLVAIGTIADM VSLTDENRIMVKVGLEILKTTERIGLQELLRISDVDPTTISEETVGFKLAPQLNALGRLD DPNPAIELLTGFDDEEAQAIALEINAKNEERKEVVQKIFDEAMTMVDLDKPVQVLAKEGW HPGVLGIVAGRIMEQISQTVVVLNIEDGLAKGSARSLESINIFHALDDHRDIFTAFGGHA GAAGMTLPEENLGQLSEVLCQYVYDNDIDTSAKNTLHLDEELQLSELSLDTIKSLEKLAP FGMDNKKPVFWLHDITVTQARTMGQNGAHLKFKVKQGKDSFDVVAFNKGNLLQEFQQAQG LELAVTLSVNVWNGQTTLQLMLEDARVDGVQLFDFRSKNISLPEGLPTVEEAADTEPAVV LNTLPDSATELKAWFEGKAFQAIYFKNNIKEAYYLTGYGTREQFARLYKTIYQFPEFDVR YKLDDLSHYLKIDKILLIKMIQIFDELDFVTIDNGVMTVNKEAEKREIEESKIFQDLKRL VKFQELMALGTPQEIYDWLYKQEQ >gi|311101497|gb|AEKO01000005.1| GENE 59 60787 - 61305 756 172 aa, chain + ## HITS:1 COG:SP1577 KEGG:ns NR:ns ## COG: SP1577 COG0503 # Protein_GI_number: 15901419 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 170 1 170 170 304 89.0 5e-83 MKLEDYIASIENYPKEGVTFRDISPLMADGNAYSYAIREIVQYATDKKIDMIVGPEARGF IVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLCMHADAIRPGQRVLIVDDL LATGGTVKATIEMIERLGGVVAGCAFLIELDGLNGREAIEGYDAKVLMNFPG >gi|311101497|gb|AEKO01000005.1| GENE 60 61476 - 62420 863 314 aa, chain + ## HITS:1 COG:SP1576 KEGG:ns NR:ns ## COG: SP1576 COG1897 # Protein_GI_number: 15901418 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Streptococcus pneumoniae TIGR4 # 1 314 1 314 314 427 62.0 1e-120 MPIKLDNKLPALDVLRSENVFIMDENRASSQDIRPMEVLILNLMPTKEVTETQLLRLLAN TPLQINVEFLYMASHKSKNTHAEHMETFYKTFDEIKDKYYDGLIVTGAPVEQMPFEEVDY WQELTQVFDWSKKHVYSTLHLCWGAQAGLYYKHGVDKVPLSEKLSGIYKQTVDMPKNFLM NGFDDSFVSPHSRYTEVTLEDIKNKTDLDVVVSGKEVGLSILASKNLREVYSFGHFEYDC DTLAREYRRDLDAGINPDMPANYFPGDDPSQEPKLRWNLAASAFFSNWINYAVYQETPYR LEELEDDFSFYGYL >gi|311101497|gb|AEKO01000005.1| GENE 61 62491 - 63189 530 232 aa, chain + ## HITS:1 COG:SPy0928 KEGG:ns NR:ns ## COG: SPy0928 COG3935 # Protein_GI_number: 15674948 # Func_class: L Replication, recombination and repair # Function: Putative primosome component and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 192 1 190 227 206 53.0 3e-53 MSFFEQYRTGNLVLPNALFFHFKDIFPSADDFLVWQFLYLQTTTQIGEVASSQIAQATGK TLTEVNKSITTLTEAGLLDFTTIKVNNEIEMVVDASPALAVLDKLVSSEKPTTGPVVGQP TNTQLIKQLTDELEQALGILNPMVIEDLNKEIQEEHTDPELIREALKEAVFNRKTNWNYI KGVLRNWKTSGITTKIQVEERRLEHQGKKQHHQISDEFKTGMDAARQLWGGQ >gi|311101497|gb|AEKO01000005.1| GENE 62 63189 - 63833 341 214 aa, chain + ## HITS:1 COG:SPy0929 KEGG:ns NR:ns ## COG: SPy0929 COG0177 # Protein_GI_number: 15674949 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Streptococcus pyogenes M1 GAS # 2 209 3 210 218 345 77.0 3e-95 MLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTDKAVNKVTPGLWARYP EIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTARAVLMNFDGQVPKTHKELESLPGVGR KTANVVLAEVYGIPSIAVDTHVSRVSKRLNIAPENASVEEIEAELMKKIPKKDWIISHHR MIFFGRYHCLAKNPKCQTCPLQSYCKYYRGITKK >gi|311101497|gb|AEKO01000005.1| GENE 63 64180 - 64716 400 178 aa, chain + ## HITS:1 COG:no KEGG:stu1219 NR:ns ## KEGG: stu1219 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 101 177 3 80 81 116 83.0 3e-25 MSEFRRRKTERTKGRNVSSFNKLKDPKIIRWVIGVVAVLAVVIPVVTLMWYSNNQKESET NPWKNGQLAKSKEAAAASSDNQSSQVDTSSLSDKQLEDWVFSTYAKEQGSTGENYKNLGW NVYSWTDDDNLVYAQLYDTYGNEVLLFRVDKKGQLEAYGGIDGSSDSWDVVSKTYTTD >gi|311101497|gb|AEKO01000005.1| GENE 64 64948 - 66231 1352 427 aa, chain + ## HITS:1 COG:SPy1500 KEGG:ns NR:ns ## COG: SPy1500 COG1570 # Protein_GI_number: 15675404 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Streptococcus pyogenes M1 GAS # 1 426 16 441 446 593 73.0 1e-169 MKFDRDPYLERVYLTGQVSNFRRRPSHQYFSLKDEGAVIQATIWAGVFKKLGFDLEEGMK INVVGRVQIYEPSGSYSIIIEKAEPDGVGALALQFEQLRKKLTAEGYFDERHKRGLPNFV KKIGVVTSPSGAVIRDIITTVNRRFPGVEILLFPTKVQGEGAAQEIAENIQKANQRDDLD LLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHETDTTLADFVADRRAATPTAA AELATPVSKSDTLVWIRERQNRAYQACLRRIQYNQERLAKLSQSVVFRQPERLYDGYLQK IDQLTARLEVFIKQDFERKQKEVALLSHRLQGLNLLTSVENYQDRRESLQRLLVTTTKNT LNGYRVRLEKAQDALLSLDTSRIVARGYAIVNKGDKPLTTIKDITEGDQLTIQMRDGELE VEVKNVN >gi|311101497|gb|AEKO01000005.1| GENE 65 66221 - 66436 369 71 aa, chain + ## HITS:1 COG:SPy1499 KEGG:ns NR:ns ## COG: SPy1499 COG1722 # Protein_GI_number: 15675403 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII small subunit # Organism: Streptococcus pyogenes M1 GAS # 1 70 1 70 71 72 80.0 2e-13 MSTKKTFEENLQDLEAIVTKLETGDVALEDAIAEFQKGMALSKDLQKTLEDAEKTLVKVM QADGTETEMDA >gi|311101497|gb|AEKO01000005.1| GENE 66 66436 - 67308 844 290 aa, chain + ## HITS:1 COG:SPy1498 KEGG:ns NR:ns ## COG: SPy1498 COG0142 # Protein_GI_number: 15675402 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 370 67.0 1e-102 MTKREKIDAAIRDYYQKKNLPVSSDLITAILYSVDSGGKRIRPLIFLDLLEGFGLELTPS HFDVAASLEMIHTGSLIHDDLPAMDNDDYRRGRLTNHKKFDEATAILAGDSLFLDPFALV AQTELSAEIRVQLIQALSYASGTFGMVGGQMLDMKGEDLELDLSQLAKIHENKTGKLLTF PFVAAGIVSQQEDRVMENLKEAGRLIGLAFQVRDDILDVTADFEELGKTPGKDVVAGKST YPALLGLEKSHVILEESLNKAESIFKDLAEDQGFKQDNIMKIIERLRLHA >gi|311101497|gb|AEKO01000005.1| GENE 67 67301 - 68128 859 275 aa, chain + ## HITS:1 COG:SPy1497 KEGG:ns NR:ns ## COG: SPy1497 COG1189 # Protein_GI_number: 15675401 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Streptococcus pyogenes M1 GAS # 1 275 1 275 275 425 78.0 1e-119 MPKERVDVLAYKQGLFETREQAKRGVMAGLVVNVINGERYDKPGEKIDDGTELKLKGEKL KYVSRGGLKLEKALAVFNLSVEDMTTIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVW KLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISLNLILPALAKILVDRGQVVA LVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEF LAHLEKTDSPRNDGQTSIKEVVAQAHKEFKNNEEE >gi|311101497|gb|AEKO01000005.1| GENE 68 68115 - 68561 380 148 aa, chain + ## HITS:1 COG:SPy1496 KEGG:ns NR:ns ## COG: SPy1496 COG1438 # Protein_GI_number: 15675400 # Func_class: K Transcription # Function: Arginine repressor # Organism: Streptococcus pyogenes M1 GAS # 1 147 1 153 156 119 44.0 1e-27 MKKNDRLELIRKIVQENKITTQGELVRLLQAEGLKATQATVSRDINEIGITKVPTEDGSY IYGLSTAPRRVGGSSVACRRLLRIDRQHAFMNILVQPGTSRLIKKILLDEYKHLIFSLIA DDDTLFLVAQSELAAIELQGQIVKWVEE >gi|311101497|gb|AEKO01000005.1| GENE 69 68570 - 70240 1403 556 aa, chain + ## HITS:1 COG:SPy1495 KEGG:ns NR:ns ## COG: SPy1495 COG0497 # Protein_GI_number: 15675399 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 550 1 550 553 765 75.0 0 MLLEITIKNFAIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLGARASSEVVRHSAP KAEIQGFFSIEQNPALVSLLEDNGIPVEDELIIRREVFQNGRSVSRINGQMVNLTTLKSV GHFLVDIHGQHDQEELMRPALHISMLDAFGDKAFFQTKKKYQEYFDRYRELRKAVLEKQK NEQEHKARIEMLAFQIAEIEAASLKSGEDFALLKERDKLLNHKQIADTLTNAYVMLDNED FSSLSNVRSAMNDLQSLEEYDSDYKELSNNLSEAYYVLEDVTKQLGDLVDNLDFDAGRLQ EIEHRLDTINAITRKYGGTVDDVLDYLENSSKEYNLLTGNSSSSDAMEQELKQLEKDLLA AAETLQTARHQIATALEAEIKAELCDLYMDKADFKVIFTKGKFNRDGNEQVEFYISTNPG EGFKPLVKVASGGELSRLMLAIKSAFARKEDKTSIVFDEVDTGVSGRVAQAIAQKIHKIG SHGQVLAISHLPQVIAIADYQFFISKESDNETTVSRVRLLTSEERVEEIAKMLAGDNVTD AALSQARALLKVDEPV >gi|311101497|gb|AEKO01000005.1| GENE 70 70310 - 71146 638 278 aa, chain + ## HITS:1 COG:SP1112 KEGG:ns NR:ns ## COG: SP1112 COG1307 # Protein_GI_number: 15900979 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 277 1 277 279 365 68.0 1e-101 MSKIRIVTDSSITIEPELVEKYNITVVPLSVMVDGVIYSDSDLREEGRFLEMMKHSKELP KTSQPPVGLFAETYEKLVKDGAEQIVAIHLMHTLSGTCEASRQGANLSGADVTVIDSGFT DQCLKFQVVEAAKLAQEGASLEDIVAHVEEVKSKSELHIGVSTLENLVKGGRIGRVTGLL SSLLNIRVIMELKDYQLNTIAKGRGAKTFMKWLDSYIDAIKDRKVAEIGISYAGKRDLAK ELASKLEVLGAPISILETGSIIQTHTGEDAFAVMVRYE >gi|311101497|gb|AEKO01000005.1| GENE 71 71462 - 72013 416 183 aa, chain + ## HITS:1 COG:SPy1492 KEGG:ns NR:ns ## COG: SPy1492 COG2755 # Protein_GI_number: 15675396 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Streptococcus pyogenes M1 GAS # 1 170 111 274 286 219 61.0 3e-57 MQEKKDIKRDLKKAKMMTLTVGGNDVIHVIKDNITNLNVNTFSKPAVEYQKRLRHIIELV RKDNKTLPIYIVGIYNPFYLNFPEMTEMQTIVDNWNQSTEDVCKEYDNVYFVPVNDLLYK GIDGKGGVTSSDETSQSAKSSQGSLNDALFEDDHFHPNNTGYQIMSDAILKRINQTKKEW SGE >gi|311101497|gb|AEKO01000005.1| GENE 72 72087 - 72575 461 162 aa, chain + ## HITS:1 COG:SPy1491 KEGG:ns NR:ns ## COG: SPy1491 COG4698 # Protein_GI_number: 15675395 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 12 159 47 194 195 123 40.0 1e-28 MTPVETSSVSLPKGATKIGKYSMSKEELDAALTGFAQDYSNDKMRFKVKVTNSKIVFESS YKVLGHAVPLYVYFTPLVSESGAVVLQVSELSAGTLKLPVSDALKMIKRSTKLPDYIVID SKKGKVTLNIQSMKNDKGITARAQSFDLVNDRIEFDIYKTIN >gi|311101497|gb|AEKO01000005.1| GENE 73 72712 - 72987 175 91 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826039|ref|YP_001290792.1| 50S ribosomal protein L35 [Haemophilus influenzae PittEE] # 4 91 6 93 96 72 37 3e-11 MANKQDLIAKVAEATELTKKDSAAAVDAVFASIEEFLATGEKVQLIGFGNFEVRERAARQ GRNPQTGETISIAASKVPAFKAGKALKDAVK >gi|311101497|gb|AEKO01000005.1| GENE 74 73046 - 73246 280 66 aa, chain + ## HITS:1 COG:no KEGG:STER_1174 NR:ns ## KEGG: STER_1174 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 66 1 66 66 94 89.0 1e-18 MKTITVVLIFLLVFTVIKLSAIAAISKLMKPSEKQIEEARQKRLQAEKEGKDPFEDWDER DDDGLV >gi|311101497|gb|AEKO01000005.1| GENE 75 73304 - 74239 1030 311 aa, chain - ## HITS:1 COG:SPy1432 KEGG:ns NR:ns ## COG: SPy1432 COG0167 # Protein_GI_number: 15675344 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 1 311 1 311 311 520 79.0 1e-147 MVSTATKVGQFTFDNCLMNAAGVYCMTKEELAEVEASAAGSFVTKTGTLEARPGNPEPRY VNVPLGSINSMGLPNNGFEYYLDYVIELQKQPNTKNHFLSLVGLSPEETHTILKKVQDSD YEGLVELNLSCPNVPGKPQIAYDFETTTEILTEVFSYFTKPLGVKLPPYFDIVHFDQAAA VFNQFPLVFVNCVNSIGNGLYIEDESVVIKPKNGFGGIGGDYIKPTALANVHAFYQRLKP EIQIIGTGGVKSGRDAFEHILCGASMVQVGTALQKEGVAIFDRITKELKEIMEEKGYETL EDFRGKLHYID >gi|311101497|gb|AEKO01000005.1| GENE 76 74495 - 75187 890 230 aa, chain + ## HITS:1 COG:SP1655 KEGG:ns NR:ns ## COG: SP1655 COG0588 # Protein_GI_number: 15901490 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Streptococcus pneumoniae TIGR4 # 1 230 1 230 230 447 98.0 1e-126 MVKLVFARHGESEWNKANLFTGWADVDLSEKGTQQAIDAGKLIKEAGIEFDQAYTSVLKR AIKTTNLALEASDQLWVPVEKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIWRRSYDVL PPAMDRDDEHSAHTDRRYASLDDSVIPDAENLKVTLERALPFWEDKIAPALKDGKNVFVG AHGNSIRALVKHIKQLSDDEIMDVEIPNFPPLVFEFDEKLNVVNEYYLGK >gi|311101497|gb|AEKO01000005.1| GENE 77 75535 - 77091 1764 518 aa, chain + ## HITS:1 COG:lin2094 KEGG:ns NR:ns ## COG: lin2094 COG0119 # Protein_GI_number: 16801160 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Listeria innocua # 1 497 1 496 512 558 57.0 1e-158 MRKVEFFDTSLRDGEQTPGVNFSIKEKVTIAKQLEKWGISVIEAGFPAASPDSFEAVKQI AEAMTTTSVTGLARSVKSDIDACYEALKDAKYPQIHVFIATSPIHREFKFNKSKEEILEI VKEHVSYARSKFEVVEFSPEDATRTELDFLTEVVQTAVDAGASYINIPDTVGFTTPEEFA RIFDHLTENIKSDHKVVFGVHCHDDLGMATANTLTAIKHGAGRVQGTVNGIGERAGNVAL EEVAVALKIREDFFQATSDIVLNETMNTSELVSRFSGIPVPKNKAVVGGNAFSHESGIHQ DGVLKNPQTYEIFTPELVGVKSNSLPLGKLSGRHAFVEKLKELELDFVEEDIKPLFAKFK VLAGKKHDITDADIRALVAGTSVDNPEGFHFQDLRLTTNADETITATVSLVNEDGESVEF LANGQGSVEAIFNAIDKFFNQTVRLTSYNIDAVTDGIDAQARVLVTVENVDTDTIFNASG LDFDVLKASAIAYINANTLVQKENAGEMARKVSYRDLP >gi|311101497|gb|AEKO01000005.1| GENE 78 77110 - 78147 1266 345 aa, chain + ## HITS:1 COG:L0074 KEGG:ns NR:ns ## COG: L0074 COG0473 # Protein_GI_number: 15673200 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Lactococcus lactis # 1 319 1 318 320 451 70.0 1e-127 MTKKIVTLSGDGIGPEIMAAGLEVLDKVASKIGFDYDIDAKPFGGAGIDAEGHPLPKSTL DAAKSADAIVLAAIGGPKYDNAPVRPEQGLLAIRKELNLFANIRPVRIFDALKHLSPLKP ERIEGVDFVVVRELTGGIYFGEHILEEDKARDINDYSADEIRRIMRRAFKIAQGRGKKVT SIDKQNVLATSKLWRKVADEVSLEFPDVTLEHQLVDSAAMIMITNPARFDVVVTENLFGD ILSDESSVLPGTLGVMPSASHSENGPSLYEPIHGSAPDIAGQGIANPISMILSVAMMLRE SFNETEGAELIENAVDKTLNQGILTRDLGGQASTAEMTTAIIGNL >gi|311101497|gb|AEKO01000005.1| GENE 79 78152 - 78433 161 93 aa, chain + ## HITS:1 COG:L4152 KEGG:ns NR:ns ## COG: L4152 COG3326 # Protein_GI_number: 15672598 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 5 88 3 86 91 73 50.0 1e-13 MTLKLVLLSVLLVWNLVVLSVYGLDKHKAIQHKRRISEKSLLLQTIIFGGIGAFLGGRLF RHKINKWYFKFCWLLGIVIDVVLLYLILTRLSD >gi|311101497|gb|AEKO01000005.1| GENE 80 78464 - 79846 1507 460 aa, chain + ## HITS:1 COG:L0075 KEGG:ns NR:ns ## COG: L0075 COG0065 # Protein_GI_number: 15673202 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Lactococcus lactis # 1 456 1 457 460 702 72.0 0 MSGKSIFDKLWERHVIAGDEGQPQLMYVDQHYIHEVTSPQAFQGLRDAGRKVRRPDLTFG TFDHNVPTVNIFDIRDVISKAQIDKLAENVIEFGIDNAPHGSDKQGIVHMVGPETGRTQP GKFIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQVKPKKMLVEFTGKPQKGIYS KDYILALIAKYGVACGVGYVVEYRGEAIDRLTMEERMTICNMSIEFGSKMGIMNPDQATY DYMRGRECVPEDFDAAVADWKTLVSDDDAEYDKVIRMDVSELAPMVTWGTNPSMGVDFDT PFPEVRDMNDERAYHYMDLRPGQKAEDIDLGYIFIGSCTNARLSDLQLAARFVKGKKIAP NLTAIVVPGSRPVKQAAEKIGLDKIFKDAGFEWRDPGCSMCLGMNPDKVPDGVHCASTSN RNFEDRQGFGAKTHLCSPAMAAAAAIAGRFVDVRQMPEVQ >gi|311101497|gb|AEKO01000005.1| GENE 81 79856 - 80446 541 196 aa, chain + ## HITS:1 COG:L0076 KEGG:ns NR:ns ## COG: L0076 COG0066 # Protein_GI_number: 15673203 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Lactococcus lactis # 1 189 1 188 191 261 66.0 8e-70 MEKFTIYTGTTVPLMNDNIDTDQILPKQFLKLIDKKGFGKYLMYAWRYKDDKYTEDPDFV FNRPEYRKATILITGDNFGAGSSREHAAWALADYGFKVVIAGSFGDIHYNNELNNGMLPI VQPIEVRQKLKQLKPTDKVTVDLEQQKIISPVGEFTFEIDGEWKHKLLNGLDDIGITLQY EDLITEYEKHRPSYWQ >gi|311101497|gb|AEKO01000005.1| GENE 82 80543 - 81328 949 261 aa, chain + ## HITS:1 COG:no KEGG:str1199 NR:ns ## KEGG: str1199 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 261 1 261 261 520 98.0 1e-146 MTKHVQWDGNLNQEGFEILKGEGGCIVTPTKVGYIIMTSDKAGLERKFEAKERNRNKPGV VLCGSMDELRALAQLTPEIDAFYQKHWDEDILLGCILPWREDAYAKLQAFGDGREELMTD VRGTSCFVIKFGKAGEQIAKEMWEKEGKMVYASSANPSGKGNRGKVEGIGERIENAVDLV IEADEYVASIQPDKTVETRYEQGVMVSMVDADGKLIPEQGEGSRSVEPCPVVIRKGLDID KIMMHLSDHFNSWNYRQGEYY >gi|311101497|gb|AEKO01000005.1| GENE 83 81481 - 84591 2588 1036 aa, chain + ## HITS:1 COG:SPy1284 KEGG:ns NR:ns ## COG: SPy1284 COG0587 # Protein_GI_number: 15675237 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 1036 1 1036 1036 1314 63.0 0 MFAQLDTKSVYSFMDSVVDLNTYVKRAKELGYQSIGLMDRDNLYAAYHFAQLAIRNGLRP LIGIEANLFYDGRKIPFRLLAKNNQGYKNLMKLATELSSGQREFTLFSDYLNDIALIIPS EDWEPGMSLGSEVFIGVRPEDAGKEFDYPVVPLHTVRYFENADRSTIQTLHAISQNVSLS EASICPMNQLLFSPQEMESAYSDIPEALNNLEQLVSDITYQFDTDLKLPRFNRDMPAVDQ LRQLAQSGLDSKALREPVYQERLDKELSIIHQMGFDDYFLIVWDLLRFGRSRGYYMGMGR GSAAGSLVAYVLDITGIDPVKNDLLFERFLNEERYSMPDIDIDLPDIYRSEFLHYVRDRY GSKHSAQIVTFSTFGAKQAIRDVFKRFGAKEFELSQLSKKISFRDNLTSVYEKNMSFRQL INQRQEFQRAFEIAKAIEGQPRQTSIHAAGIVMSDDDLTNHIPLKTGEDMMVTQYDASAV EANGLLKMDFLGLRNLTFVQKMKEKLEEEQGIAIDIKSIDLEDSQTLALFASGKTKGIFQ FEQAGAINLLKRIKPTKFEEVVATTSLNRPGASDYTDNFIARKYGKEKVDLIDPVVAPIL EPTYGIMLYQEQVMQIAQVFAGFTLGKADLLRRAMSKKDANEMSKMSEEFMKGSRRFGRD PQIAERLFSMMAKFAGYGFNRSHAYAYSALAFQLAYFKTHYPQIFYDVMLNYSSSDYIKD AIENGFSLASLDINRIPYLDKISDGKIVLGLKTIKGLPRDFALWIIEERKQNGKYISIED FLTRIPSKYQKVDILTPLIQIGLFDIFEPNRQKIIGNLSNLFTFVNELGSLFAESSYSWV EYEDYSQTERYSIEQDLLGVGLSTHPLHLAQKMTSRPYQPISELALNSKATVLVQLESVR IIRTKKGDQMAFLSVFDGVNKLDVTLFPETYFYHKDKLKEGGLFYLEGRTQERDGRLQLI LSNIEEASTERFWILLENHNKDLEVSQILAKHPGHIPVVIRYQGSKETIVSQRYKVSKNE ELSRELAPLVLKTVLR >gi|311101497|gb|AEKO01000005.1| GENE 84 84684 - 85703 1229 339 aa, chain + ## HITS:1 COG:SPy1283 KEGG:ns NR:ns ## COG: SPy1283 COG0205 # Protein_GI_number: 15675236 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Streptococcus pyogenes M1 GAS # 1 336 1 336 337 521 82.0 1e-148 MKRIAVLTSGGDAPGMNAAARAVVLKAISEGIEVFGINRGYAGMVEGDIFQLDAKGVDNI LSRGGTFLQSARYPEFAQLEGQLKGIEQLKKHGIEGVVVIGGDGSYHGAMRLTEHGFPAV GLPGTIDNDIVGTDYTIGFDTAVATATEALDKIQDTAFSHGRTFVVEVMGRNAGDIALWA GIASGADQIIVPEEEYDINEVVRKVKEGYESGAKTHHVIVLAEGVMGAEEFATKMKEAGD TSDLRATNIGHVVRGGTPTARDRVLASWMGAHAVDLLKQGIGGVAVGIHNEELVESPILG TAEEGALFSLTEDGKIIVNNPHKARLDFADLNRSLSNLS >gi|311101497|gb|AEKO01000005.1| GENE 85 85773 - 87275 1816 500 aa, chain + ## HITS:1 COG:SP0897 KEGG:ns NR:ns ## COG: SP0897 COG0469 # Protein_GI_number: 15900780 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 500 1 501 501 796 84.0 0 MNKRVKIVATLGPAVEIRGGKKFGEDGYWSEKLDREASAKNIAQLIKEGANVFRFNFSHG DHAEQGERMDVVRMAEDLAGQKVGFLLDTKGPEIRTELFEGDAKEYAYKTGEQIRVATKQ GIKSTRDVIALNVAGALDVFDDVEVGKQVLVDDGKLGLRVVDKDAEKREFIVEVENDGII AKQKGVNIPNTKIPFPALAERDNDDIRFGLEQGLNFIAISFVRTAKDVQEVRAICEETGN GHVKLLAKIENQQGIENIDSIIEAADGIMIARGDMGIEVPFEMVPVYQKMIITKVNAAGK IAVTATNMLETMTDKPRATRSEVSDVFNAVIDGTDATMLSGESANGKYPVESVRTMATID KNAQTLLKEYGRLDSSTFGRSSKTEVVASAVKDATNSMDIKLVVALTESGNTARLISKYR PEADILAVTFDEITQKSLMLNWGVIPVVTEKPASTDDMFDVAEKVALHSGLVESGDNIVI VAGVPVGTGGTNTMRIRTVK >gi|311101497|gb|AEKO01000005.1| GENE 86 87333 - 88130 410 265 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 264 158 421 422 310 61.0 2e-84 MSWDEFGFKKGALAFIAQNYETNELITILDNRRQTTIRNHFLKYPLKVRRKVQFITMDMS GAYMPLARRLFLNAEIIIDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQ KDSRKLSLNSFYSKTFRQTLAPHEVVEKTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFE LIEENRSKVNHYFQTVFRTFLRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFGFRNF INFKKRVFITLNIKKEKTYQVLSRC >gi|311101497|gb|AEKO01000005.1| GENE 87 89618 - 89908 275 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIANKATSETAPSVIDSQASAKTEPSQSTDNGSGTAKSMDSSSQTSEAKNHESSSTAQAS LENLVVANGLTNTSALSASNELEATEAAIMNTESDY >gi|311101497|gb|AEKO01000005.1| GENE 88 89985 - 90767 756 260 aa, chain + ## HITS:1 COG:no KEGG:str1193 NR:ns ## KEGG: str1193 # Name: not_defined # Def: surface-associated protein CshA precursor, truncated # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 119 243 1 126 159 162 82.0 9e-39 MDGLYIPTVTPKELEREDKTSMDVQGVSQTGTPELAIEGTNNNGEKVKITLDFDYMSKFV DPTTGNVINDPVSTVEGIYYLDELTGKVTFVSDPGFTGTAKGVTVSLTTSVGRDKDGRVS DNALKTATDKYTQTVTTVTSIGKKSATQTGKPIFTEGDIHVSINDAVPVTFEDSTTTKTV SGLGSYTVAADGTVTFTPEAEFTEPVPAVTVVHEDVNETKASATYTLTVLPVTSFVDKGG REILQLMVNKQKLKFQVIAS >gi|311101497|gb|AEKO01000005.1| GENE 89 90872 - 91090 131 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228476394|ref|ZP_04061088.1| ## NR: gi|228476394|ref|ZP_04061088.1| surface-associated protein CshA [Streptococcus salivarius SK126] # 12 71 473 532 533 85 83.0 7e-16 MTPTPVPQPAPQTEEPKAPVLPETKEEAYFINPTDKTAQLPETGSENSNLAFVSLSSLIA GMGLYTGKRRKC >gi|311101497|gb|AEKO01000005.1| GENE 90 91274 - 91495 276 73 aa, chain + ## HITS:1 COG:no KEGG:str1191 NR:ns ## KEGG: str1191 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 73 1 73 73 132 87.0 4e-30 MIEVTYLNTAKQEKHTSFEDYNEFVRAQQACWIALPDSTPVTKVTINGHDIGYKGQYGDL YFYIMKLDLAQYQ >gi|311101497|gb|AEKO01000005.1| GENE 91 91631 - 92632 1143 333 aa, chain + ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 325 11 339 344 337 59.0 2e-92 MKNKRLIWTLVFLAILTLSSIGTDLFKKEHQNTNKVVKVGILQFVTHDALDQIEKGIEDG IKEAGYKGNKVQVTLLNAEGDQSKIQTMSKQLVNDKNDVVIGIATPAAQGLAAATKDIPV IMGAISDPIGAKLVKDLKHPEGNVTGTSNQVPIKQTVELVKSLTPNAKTIGILYASSEDN SKSQVENFKKYAEQDGLNVVEYAVPSTNEINTTMSVMTGKVDAIWTPQDNTIASAFSTVI SSANQAKIPVYTTVDTMVKEGGLASVAQSQYELGKATARSAVKVLKGKKVKDVPVDVIDD GTPTLNLKVAQDLNITIPENVLKQSDIAVKADK >gi|311101497|gb|AEKO01000005.1| GENE 92 92644 - 93513 1021 289 aa, chain + ## HITS:1 COG:SPy1018 KEGG:ns NR:ns ## COG: SPy1018 COG4120 # Protein_GI_number: 15675019 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 289 1 289 289 358 75.0 5e-99 MIISSIYQGLLYGILGLGIYMTFRILDFPDLTTEGSFPLGGAVAVTLMNFGWNPILATLV AVLAGCGAGLVTGLLYTKGEIPTILAGILVMTSLNSVMLMIMGRANLGLLDIKTIQDLLP FSKDYNLLIVGLIAVTIVITALIAFLNTRLGQAYIATGDNRDMAKSFGINTDSMEVMGLV ISNGIIALSGALISQQDGYADVSKGIGVIVIGLASIIIGEVLYTTNLTLLERLIAICVGS ILYQFLLTAVIALGFNTNYLKLFSAIVLAICLISPVLRRKFFKGVTLSR >gi|311101497|gb|AEKO01000005.1| GENE 93 93510 - 94268 224 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 233 1 217 311 90 29 6e-17 MTAIVELKDATVKVNNGFDTEKTILDHVNLTIREGDFITILGGNGAGKSTLFNVIAGTLM LTSGQIFILGEDVTSLPAEKRAKYLSRVFQDPKMGTAPRMTVAENLLIAKYRGEKRSLKS RQIHLYTEEFQGLIERISNGLEKHLETPAGLLSGGQRQALSLLMATLKRPELLLLDEHTA ALDPKTSVALMELTDEFVTGDHLTALMITHHMEDALKYGNRLIVMKDGQIIKDLTKEEKD QLDITDYYAMFE >gi|311101497|gb|AEKO01000005.1| GENE 94 94447 - 96108 2283 553 aa, chain + ## HITS:1 COG:SPy1020 KEGG:ns NR:ns ## COG: SPy1020 COG0595 # Protein_GI_number: 15675021 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 553 1 553 553 879 80.0 0 MSDIKIIALGGVRENAKNLYIVEINDSIFILDAGLKYPENEQLGVDFVIPNLDYLIENRD RIQGIFLTHGHADAIGALPYILQDVKAPVFGSSLTIELAKLFVKNAGVKKFNNFHVIDAE TEIEFEDAVVSFFKTTHSIPESMGIVLGTDRGNIVYTGDFKFDQAARPYYKTDLSRLAEI GREGVLALLSDSANATSTEQTASEAEVGQEIDQVIADAEGRVIVAAVASNLVRIQQVFDS AADHGRRVVLTGFDVENIVRTAIRLKKLTVEHEKLIVKPKDMNKFEDHELIILENGRMGE PIDGLQKMAVGRHRYVQIKDGDLVYIVTTPSIAKEAVVARVNNAIYKAGGTVKMITQSLR VSGHANARELQLMINLLRPQYLFPVQGEYRDLQAHAELALEVGILPENIYIVKRGDIMHL SEDQGFLHEGAVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVNKKERKIVSK ARVNTRGFVYVKKSRDILREAADIVNATVENYLAGDSFDWGELKGAVRDDVAKFLFDQTK RRPAILPVVMEVR >gi|311101497|gb|AEKO01000005.1| GENE 95 96244 - 97026 784 260 aa, chain + ## HITS:1 COG:SPy1022 KEGG:ns NR:ns ## COG: SPy1022 COG0627 # Protein_GI_number: 15675022 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 261 261 331 61.0 7e-91 MAFFQIEYSSDVLGQYRQVDVIYPDRDQIAERESDMDIPVLYLLHGMGGNHNSWAFRTNI QRLLRKTNLIVIMPNTENGWYTNTNYGVKYYDAIAKELPQVMQRFFPSMTKKREKTFIAG LSMGGYGSFKLALTTNNFSCAGSFSGALGLSAEMITDETSESKEYWQGVFGDLEGKDIEQ HKLVNLAKQHDKKTKFFAWCGLEDFLFDSQNKAVADLKALGLDIDYRTDHGRHEWYYWEK QLEAYLEWLPIDYIKEERLS >gi|311101497|gb|AEKO01000005.1| GENE 96 97145 - 97864 561 239 aa, chain + ## HITS:1 COG:SP0617 KEGG:ns NR:ns ## COG: SP0617 COG5549 # Protein_GI_number: 15900525 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted Zn-dependent protease # Organism: Streptococcus pneumoniae TIGR4 # 5 237 8 236 240 184 42.0 2e-46 MKKLLRVIFYIPKLLLQFIWNLIWAIFKLALILTIVGYGLIYYANNSSSTLATNINQAFR QVELGFSGTNASDVKKVVSNLSTTDTIPESNGARWAQNTASIYIQSTDETLVAAYKEAIT DWNNTGAFIFTLTDDASTADIVATDYSDANSQAAGLADSQTNVLTNRITHVDVKLNRYFL LNSDFGYTHKRIVNTAEHELGHAIGLDHDDSKTSVMQSAGSYYGIQQVDIDTVHALYAN >gi|311101497|gb|AEKO01000005.1| GENE 97 97877 - 98248 217 123 aa, chain + ## HITS:1 COG:no KEGG:STER_1149 NR:ns ## KEGG: STER_1149 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 123 1 123 123 158 76.0 4e-38 MHYLKRLARRYPMQTFLFLFNAGVFTWLQTTGTMIANRLGLSSDGIWIYIPTWVKMLTSH SIESIQTLYGASGWSWLITSMILTWLLTFLRGLMRAVILILIVGLGLWLVYRHFELLQNL KLS >gi|311101497|gb|AEKO01000005.1| GENE 98 98305 - 99561 542 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 484 62.0 1e-136 MRLIKNTTELIGIKDPNIIISLVFETDTHIEVQAKLDYPAPPCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLCLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLHVSTSTVYRKLDQFTFKKHYDKLPAIMSWDEFGFKKGALAFIAQNYETNELIT ILDNRRQTTIRNHFLKYPLKVRRKVQFITMDMSGAYIPLAHRLFPNAKIVLDRFHIIQHL GRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLNFSEELANYYNLYQLLLFHFQEKRVDEFFELIEENMSKVNHYFQTVFRTFIRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311101497|gb|AEKO01000005.1| GENE 99 99752 - 100195 621 147 aa, chain + ## HITS:1 COG:SPy0721 KEGG:ns NR:ns ## COG: SPy0721 COG0716 # Protein_GI_number: 15674777 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Streptococcus pyogenes M1 GAS # 1 146 1 146 149 200 80.0 9e-52 MALAKIVYASMTGNTEEIADIVAKKLEELGHTVDVDECTTVDAADFEDADICIVATYTYG DGELPDEIVDFYEDLADLDLSGKIFGVVGSGDTFYDYFCKSVDEFETQFTFTGATKGADS VKVDLSAEDEDIENLEAFAEKVSEALA >gi|311101497|gb|AEKO01000005.1| GENE 100 100246 - 101781 1460 511 aa, chain + ## HITS:1 COG:SPy1114 KEGG:ns NR:ns ## COG: SPy1114 COG0038 # Protein_GI_number: 15675095 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pyogenes M1 GAS # 1 511 1 510 510 450 57.0 1e-126 MNEIERDFRTQSQHLLWSVWRGLLVGVAAGAVVSFFRWLIAKGAQISVSIYQDALHNPVL ILEIVFVNLVFAILIGYLIKQEKDIKGSGIPHVEGELMGLLHPSWWSVLWRKFLGGVLGI SMGLMLGREGPSIQLGAMTAKGLAEGLKLSAREKRVLIAAGAAAGLSAAFNAPIAGLLFV VEEVYHHFSRHVWVTALTASLVANAVSLRIFGQVPVLAMTEKLPVFPLKDYWILIVLGIF LGVLGYGYEWVVLRIGKVYQGLGKIFHLPSHFHGLLAVLFIIPIGLYFPHLLGGGNELIL ALNGLHPALTVAILYLAIRFIWSMLSFGSGFPGGIFLPILTLGALSGSVFAAAFENLGFL DSTQFPIFIILGMAGYFGAVSKAPLTAMILVTEMVGDLHQLMTIGVVTLIAYLVMDFMGG EPVYEAMLHNLIAHEPKQVDKIPTMIDLPVTDSLAGRLVKDLTLPDGVLISTQIFQDQSE VVHGDTRLKAGATLYLVVNESNISQVRKLFL >gi|311101497|gb|AEKO01000005.1| GENE 101 101855 - 102127 404 90 aa, chain + ## HITS:1 COG:SP1296 KEGG:ns NR:ns ## COG: SP1296 COG1605 # Protein_GI_number: 15901156 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Streptococcus pneumoniae TIGR4 # 1 83 1 83 88 80 56.0 8e-16 MDLNEIRQQIDTVDNEIVALLEERMKLVTRVSAYKQRTGKAIYDPEREQALLNKVAASVT NPEYQEAIVASFSDIMKHSRTYQAGKLEGK >gi|311101497|gb|AEKO01000005.1| GENE 102 102137 - 102925 674 262 aa, chain + ## HITS:1 COG:SPy0723 KEGG:ns NR:ns ## COG: SPy0723 COG0038 # Protein_GI_number: 15674779 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pyogenes M1 GAS # 24 250 23 249 420 213 57.0 4e-55 MKVRQLSESQGLSYSNLVILSLYAVFLGVIVGLIDAIFGRVLIGLSEYRDHHLFYLVPAL PIAGLLIVYLYQRFAGKAAQGMGLIFKVGHNEEKQVPLRLIPLVTVTTWLTHLFGGSAGR EGVAVQLGATVSHAFSRYFKIPNASRIFLTMGMAAGFGGLFQTPIAATFFAIEVLTLGQL SLPILAPTLIASFVASTTSHFLGLEKFSHFVSDSLSIDLETFVKLVLLGLTFGLVGNLFA YLLAMAKKRLLVFFLIPTIVFF >gi|311101497|gb|AEKO01000005.1| GENE 103 102937 - 103362 361 141 aa, chain + ## HITS:1 COG:SPy0723 KEGG:ns NR:ns ## COG: SPy0723 COG0038 # Protein_GI_number: 15674779 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pyogenes M1 GAS # 1 140 267 406 420 153 61.0 7e-38 MTCLLLLLWKGRYTGLGTNLIVLSVGGGTIYSFDWLLKLLLTVFTLSLGFQGGEVTPLFA IGASLGAVLAPVLGLPIPLVAGLGYLSVFGSSTNTILAPIFIGVEVFGPANVLPYVIVMA FAYLINHKTSIYGQQKMLEIQ >gi|311101497|gb|AEKO01000005.1| GENE 104 103490 - 103837 575 115 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821188|ref|YP_139630.1| 50S ribosomal protein L19 [Streptococcus thermophilus LMG 18311] # 1 115 1 115 115 226 100 1e-57 MNPLIQSLTEGQLRTDIPSFRPGDTVRVHAKVVEGTRERIQIFEGVVISRKGQGISEMYT VRKISSGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLRALQGKAARIKEIRK >gi|311101497|gb|AEKO01000005.1| GENE 105 104096 - 104581 337 161 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1987 NR:ns ## KEGG: SDEG_1987 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 160 1 164 165 204 64.0 6e-52 MKQTFITSYLTFYLKASVALEGDFIKTSNPNTILKVIPLGAQNKTIPVDHISSVDDSFRL DFKSFAWGIIFALVGFNMMGSSILGGLILAAYGILTVLSAFQTLLILNLTSGGAHVLSVV VFEKSNLLTCKETIESLIQHRYNNTNVTANTDRVIEALNNK >gi|311101497|gb|AEKO01000005.1| GENE 106 104934 - 105110 287 58 aa, chain - ## HITS:1 COG:no KEGG:STER_1141 NR:ns ## KEGG: STER_1141 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 57 1 57 58 69 94.0 4e-11 MAKKHSFAKGLATGVLGTAATVAGAVFAVKKTIIEPEEKKLAFIEENRKKAARRRVSR >gi|311101497|gb|AEKO01000005.1| GENE 107 105186 - 106085 925 299 aa, chain + ## HITS:1 COG:SPy0921 KEGG:ns NR:ns ## COG: SPy0921 COG0324 # Protein_GI_number: 15674941 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Streptococcus pyogenes M1 GAS # 2 298 3 299 299 411 70.0 1e-115 MKTKLIVVAGPTAVGKTALGIELAQRFNGEIISGDSQQVYRQLNIGTAKATPQEQAAAVH HLIDVRDVDESYSAYDFVTEAQIAITDIVNRGKLPIIVGGTGLYLQSLLEGYHLGGQVDQ EQVLAYRSELEQLSDLELFEQIDNLGIEIKEINRRRSIRALELHRFSDNPENTETTFDPF IIGLDDERSLIYERINTRVDKMVELGLLEEAKWLYDNYPEVQSARGIGYKELFPYFSGEQ TLDEALEKLKQNTRRFAKRQLTWFRNRMRVKFYQISSPDYPENVIQDLALFLNEREGSE >gi|311101497|gb|AEKO01000005.1| GENE 108 106144 - 106629 491 161 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902812|ref|NP_358362.1| hypothetical protein spr0768 [Streptococcus pneumoniae R6] # 1 159 6 162 165 193 60 6e-48 KKSAYEIMLAQAKALFTNEDNALANFSNASALLNTTLPNSVFTGFYLLDHAKNELILGPF QGNVSCVRIALGKGVCGQSAAENRTLIVQDVTKHANYIACDSAARSEIVVPMVKDGTLVG VLDLDSHQVGDYDDIDQDYLEQFVKVLLEKTNLTFAMFEVN >gi|311101497|gb|AEKO01000005.1| GENE 109 106629 - 108281 1645 550 aa, chain + ## HITS:1 COG:SPy1364 KEGG:ns NR:ns ## COG: SPy1364 COG2812 # Protein_GI_number: 15675296 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Streptococcus pyogenes M1 GAS # 1 550 1 555 556 728 70.0 0 MYQALYRKYRSQTFGEMVGQKVISTTLRQAVESGKISHAYLFSGPRGTGKTSAAKIFAKA MNCPNQVDGEPCNHCDICRDITNGSLEDVIEIDAASNNGVDEIREIRDKSTYAPSRATYK VYIIDEVHMLSTGAFNALLKTLEEPTQNVVFILATTELHKIPATILSRVQRFEFKSIKQG AIKEHLASILEKEGLTFDDEALTIIARRAEGGMRDALSILDQALSLSPDNHVSQAVAEEI TGSIGLTALDSFVANVRNQETTQALSNLETLFDNGKSMSRFATDLLEYFRDLLIVKAGGE NSHHSLLFEENLSLEQDRLFQLIDLVTSALPEIKTGTHPKIYAEMLTIKLSETHSQMSQE IPENLQEELDSLRREVEGLRKALKEGKVQGDALPTRKAKPAYQYKVDREKILTIMRETME NPQKSRQCLDALKATWPEILDSISPQNRALLNGSEPVLANQENAILAFNAAFNAELVMKR SDLNDMFGNIMSSAAGFSPNIMAVPKSEFEKLRTEFARSLKSKEELEKEDREEYIPQELE FLSDVVEIED >gi|311101497|gb|AEKO01000005.1| GENE 110 108557 - 108742 157 61 aa, chain + ## HITS:1 COG:no KEGG:STER_1137 NR:ns ## KEGG: STER_1137 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 61 1 61 61 86 88.0 2e-16 MIQQILFITLETIFETVCFNYSLQHGYYFFTVFFGYLLLRRLWTTYVVSRIARAAGKSTK K >gi|311101497|gb|AEKO01000005.1| GENE 111 108729 - 109667 842 312 aa, chain - ## HITS:1 COG:SPy1362_2 KEGG:ns NR:ns ## COG: SPy1362_2 COG0340 # Protein_GI_number: 15675294 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Streptococcus pyogenes M1 GAS # 75 312 2 238 240 303 63.0 4e-82 MKTYEHVYDILSKSPNFVTGESLAKSLGVSRTAIWKAIQTLQEQGIDITSVRKKGYYLEK GDILLPQDISKQLNIPVYFNPDSNSTQLDAKHGMEKNNSTPALYLASSQKAAKGRFERHF FASPQGGIYMSIHLKPNCHFEELPPYTMMVAATIVKAIQRLTGINTEIKWVNDIYLNNKK MAGILTEAISSIESGRITDVIIGVGLNFSISDFPKELANKATSLFTSEKPSITRNQLISE IWKLFLTIPTSDLVKVYKEKSLVLDKQVTFKQAGKAYSGIAKDIGDKGQLLVLTDDDQEK WLSAGEVSLTSW >gi|311101497|gb|AEKO01000005.1| GENE 112 109945 - 111138 1765 397 aa, chain + ## HITS:1 COG:SP0762 KEGG:ns NR:ns ## COG: SP0762 COG0192 # Protein_GI_number: 15900656 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 396 1 396 396 682 88.0 0 MSERKLFTSESVSEGHPDKIADQISDAILDAILAEDPDAHVAAETAVYTGSVHVFGEVST TAYVDINRVVRDTIAEIGYNNAEYGFAAESVGVHPSLIEQSPDIAQGVNEALEVRGTGDQ DPLDLIGAGDQGLMFGFAIDETPEFMPLPVSLSHKLVKKLADLRKSGEISYLRPDAKSQV TVEYDENDQPVRVDAVVISTQHDPEATNDQIRQDVIEKVIKAVIPAEYLDNETKFFINPT GRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNIVA AGLAKKAEVQLAYAIGVATPVSVRVDTFGTATVAESKLESAVRNLFDLRPAGIIAMLDLK RPIYRQTAAYGHMGRTDVDLPWEKLDKVEALKAAVEA >gi|311101497|gb|AEKO01000005.1| GENE 113 111498 - 112511 966 337 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 1 336 1 336 339 439 61.0 1e-123 MSILITGGAGYIGSHTTVELLNAGFDVVLVDDFSNSSPAVLERLEKITGKKFPFYQGSIL DTELLDKVFTNEDIELIIHFAAFKTVDESVQKPLKYYKNNISGTITLLEKMKEYEVKNIV FSSSATVYGTNNPSPMTEDMPTSAINPYGYTKLMMEQILIDVAASDPSWSVTNLRYFNPI GAHESGLIGELPNGIPNNLMPYITQVAIGKLPELNIFGDDYPTPDGTGVRDYIHVLDLAS GHLAAVKYNLSHKGAEIFNLGTGYGYSVLDLVKTFEAENKVAIPYRIQGRRAGDIATCYA SPEKAKEVLGWEAKKTLKEMVRDSWRWQKTNPNGYED >gi|311101497|gb|AEKO01000005.1| GENE 114 112698 - 112934 221 78 aa, chain + ## HITS:1 COG:no KEGG:str1168 NR:ns ## KEGG: str1168 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 78 1 78 78 106 94.0 2e-22 MAIINQFVTLASHLVFIGLSYHMLISLFDWAKIIKNPIENTGKLKLFLLFISIALGYLIS SFILSVLAFGQNMASSIS >gi|311101497|gb|AEKO01000005.1| GENE 115 113002 - 114273 1633 423 aa, chain + ## HITS:1 COG:SPy0763 KEGG:ns NR:ns ## COG: SPy0763 COG0766 # Protein_GI_number: 15674811 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Streptococcus pyogenes M1 GAS # 1 422 1 422 423 664 83.0 0 MDKIIVQGGNTRLSGEVVIEGAKNAVLPLLAATILASEGQTTLTNVPILSDVYTMNNVVR GLDIAVDFDEEKNTVVVDASGEILDQAPYEYVSKMRASIVVLGPILARNGHAKVSMPGGC TIGSRPIDLHLKGLEAMGAKITQVGGDITATAENLKGAAIYMDFPSVGATQNLMMAATLA DGVTTIENAAREPEIVDLALLLNEMGADVKGAGTETLVIKGVKALHGTKHAVVQDRIEAG TFMVAAAMTSGDVLIKDAIWEHNRPLISKLLEMGVDVKEEEGGIRVKSDVSRLKPVTVKT LPHPGFPTDMQAQFTALMAVVNGESTMIETVFENRFQHLEEMRRMGLHSEILRDTAMIHG GLPLQGAQVMSTDLRASAALILTGMVAEGTTTVGKLTHLDRGYYQFHEKLAKLGANISRV SEA >gi|311101497|gb|AEKO01000005.1| GENE 116 114275 - 114463 239 62 aa, chain + ## HITS:1 COG:no KEGG:STER_1122 NR:ns ## KEGG: STER_1122 # Name: not_defined # Def: competence-associated protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 62 1 62 62 85 85.0 5e-16 METGKGYVFRQLLLVLSVCVIGLAFLAIGLMVGYAVLGEGKDPISILKPETWQVIVAKFT GK >gi|311101497|gb|AEKO01000005.1| GENE 117 114525 - 115406 654 293 aa, chain + ## HITS:1 COG:no KEGG:STER_1121 NR:ns ## KEGG: STER_1121 # Name: not_defined # Def: competence associated membrane nuclease # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 293 1 293 293 463 91.0 1e-129 MAKRKTSLTNKQKRQLISLLIAVLIAVLGYIGTSSKLSPNNPIKQVASLVSGKSNNFVKS NSSTSGQSTPQEQLAEIVMTSSVKSQLGNSLEWNGAGAYIVNGNKTNLNAKVSSQPYANN QVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTPAGWHQVHNLSGEYNHAVDRG HLLGYALVGGLKGFDASTSNPENIAVQTAWANQANSESSTGQNYYESLVRKAQDKNKRVR YRVTLIYEGDNLIPSGSHIEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN >gi|311101497|gb|AEKO01000005.1| GENE 118 115482 - 116132 781 216 aa, chain - ## HITS:1 COG:SP0607 KEGG:ns NR:ns ## COG: SP0607 COG0765 # Protein_GI_number: 15900515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 3 216 6 219 219 268 71.0 5e-72 MSEVLSATNLKFLAQGMWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFV RNVPNLLWIFIIFLVFQLKSTAAGITSFTVFTSAALAEIIRGGLNSIDHGQTEAGLSQGF NNKQIFIYIIFPQAIRKMLPSIISQFVTVIKDTSFLYSVIALQELFGKSQILMGGYYEPS QIFTLYGIVALAYFVVNFAISSYSRYLSKQWEQASE >gi|311101497|gb|AEKO01000005.1| GENE 119 116144 - 116842 809 232 aa, chain - ## HITS:1 COG:SP0608 KEGG:ns NR:ns ## COG: SP0608 COG0765 # Protein_GI_number: 15900516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 13 232 4 223 225 273 60.0 2e-73 MYLLTETASPFALERWAAFFANFGQFAKGFFYTLGISIGALIVALLLGLIFGAMSSTHNK VLRGISRVYVEIFQNTPLLVQFVVVFYGISILTDGHVMIPISLTAILCVGVYTGAYISEI IRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAII SGADIMFTAKAWAYDTTNYVPAFAGAAFLYFIMCFPLATWARRKEEENKKAY >gi|311101497|gb|AEKO01000005.1| GENE 120 116860 - 117693 922 277 aa, chain - ## HITS:1 COG:SP0609 KEGG:ns NR:ns ## COG: SP0609 COG0834 # Protein_GI_number: 15900517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 17 272 1 249 254 261 55.0 1e-69 MIFKKFLRYLTVACLAIVTIFLISSYKTKAEDTSKLLDSKAVQKIVKRGTLNVGVKQDVP NFGYYSAKTNSYEGMEVDLAKKIADELKVKVNYIPVTTQTREPLMDNGTIDLLIGTYTIN DERKASYAISDPYYHDQIGFLVLKNSGINKISDLNGKTIGVSQGASTKAALQEYASAHNL KFNYVQLGSFPELAVSLYAHRVNAFSVDKSILSGYESKKTKTLKEGFKTQEYGIASSKSN QELIDYTNDLIAKWQKDGSLQKLYDKYHLKPAKAEDK >gi|311101497|gb|AEKO01000005.1| GENE 121 117705 - 118472 561 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 243 1 242 245 220 45 5e-56 MALIEFKNVNKYYGDYHALRDINLEIEKGQVVVLLGPSGSGKSTLIRTINALESIDNGTL IVNGHNVTEASAKDLVELRKEAGMVFQHFNLYPHKTVLENVTLAPIKVLGISKAEAEKTA EKFLRYVNMWDKKDSYPGMLSGGQKQRIAIARGLAMNPELLLFDEPTSALDPETIGDVLA VMQNLAKGGMNMVVVTHEMGFARSVADRIIFMAEGQVLVDTTDVDGFFDNPTEPRAVQFL SKIIDHNSDRVQVDA >gi|311101497|gb|AEKO01000005.1| GENE 122 118659 - 119309 754 216 aa, chain - ## HITS:1 COG:SP0607 KEGG:ns NR:ns ## COG: SP0607 COG0765 # Protein_GI_number: 15900515 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 3 216 6 219 219 268 71.0 6e-72 MSEVLSATNLKFLAQGVWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFV RNVPNLLWIFIIFLVFQLKSTAAGITSFTVFTSAALAEIIRGGLNSIDHGQTEAGLSQGF NNKQIFIYIIFPQAIRKMLPSIISQFVTVIKDTSFLYSVIALQELFGKSQILMGGYYEPS QIFTLYGIVALAYFVVNFAISSYSRYLSKQWEQASE >gi|311101497|gb|AEKO01000005.1| GENE 123 119321 - 120019 820 232 aa, chain - ## HITS:1 COG:SP0608 KEGG:ns NR:ns ## COG: SP0608 COG0765 # Protein_GI_number: 15900516 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 13 232 4 223 225 273 60.0 2e-73 MYLLTETASPFALERWAAFFANFGQFAKGFFYTLGISIGALIVALLLGLIFGAMSSTHNK VLRGISRVYVEIFQNTPLLVQFVVVFYGISILTDGHVMIPISLTAILCVGVYTGAYISEI IRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAII SGADIMFTAKAWAYDTTNYVPAFAGAAFLYFIMCFPLATWARRKEEENKKAY >gi|311101497|gb|AEKO01000005.1| GENE 124 120037 - 120870 887 277 aa, chain - ## HITS:1 COG:SP0609 KEGG:ns NR:ns ## COG: SP0609 COG0834 # Protein_GI_number: 15900517 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 41 272 18 249 254 246 58.0 2e-65 MLIKKLSRILAISVIAFVAVLLWNTKSSQADESSKLLNSAAIQKIVKKGTLNVGVKQDVP NFGYYSAKTNTYQGMEIDLAKKIAKKLKVKVNFTAVTPQTREALMDNGTIDMLIATYTIT DERKASYAMSNPYYYDQIGFLVQTKSGYKKLSDLNGKTIGVSQGSSAKTAVEEYASANNL KFDYVQLGSYPELAVSLYAYRIDAFAGDKSILSGYESDKTKILDEGFKTQEYGIASSKSN QELIDYTNNLIAKWQKDGSLQKLYDKYHLKPAKAEDK >gi|311101497|gb|AEKO01000005.1| GENE 125 120880 - 121647 562 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 243 1 242 245 221 45 4e-56 MALIEFKNVNKYYGDYHALRDINLEIEKGQVVVLLGPSGSGKSTLIRTINALESIDNGTL IVNGHNVTEASAKDLVELRKEVGMVFQHFNLYPHKTVLENVTLAPIKVLGISKAEAEKTA EKFLRYVNMWDKKDSYPGMLSGGQKQRIAIARGLAMNPELLLFDEPTSALDPETIGDVLA VMQNLAKGGMNMVVVTHEMGFARSVADRIIFMAEGQILVDTTDVDGFFDNPTEPRAVQFL SKIIDHNSDRVQVDA >gi|311101497|gb|AEKO01000005.1| GENE 126 121934 - 122641 832 235 aa, chain + ## HITS:1 COG:SPy0528 KEGG:ns NR:ns ## COG: SPy0528 COG0745 # Protein_GI_number: 15674628 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 235 1 236 236 394 88.0 1e-110 MKKILVVDDERPISDIIKFNLTKEGYEVVTAFDGREALEQFEAEKPDLVILDLMLPELDG LEVAKEIRKTSHTPIIMLSAKDSEFDKVIGLEIGADDYVTKPFSNRELLARIKAHLRRTE TIETAVEESSNSGKQEISIGELIIVPDAFVAKKRGNEVELTHREFELLFHLATHMGQVMT REHLLETVWGYDYFGDVRTVDVTIRRLREKIEDTPSRPEYILTRRGVGYYMKNYD >gi|311101497|gb|AEKO01000005.1| GENE 127 122634 - 123974 1099 446 aa, chain + ## HITS:1 COG:SPy0529 KEGG:ns NR:ns ## COG: SPy0529 COG5002 # Protein_GI_number: 15674629 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 7 445 8 446 450 610 73.0 1e-174 MTSIGLNITSFELALLFTLLFVAFYFIFLAYRDYRQAKNIRKLTKRVKSLMAGNYNEKLR IKGDSELLELADRLNDLSDVFRLTHENLAQEKNRLSSVLSYMSDGVIATNRRGQITMINS TAQRLLNLDRESATQMSILDLLDGENPYTYSELLSKTPEIHLSRRDANDEFVTLRVNFAL IRKESGFISGLVAVLHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALHE EIAPNFIKVSLDETNRMMRMISDLLALSRIDNKSTQLDVEMTNFTAFMTYILNRFDQIKS QETNPGKFYEIIRDYSVNSIWVEIDTDKMTQVVDNILNNAIKYSPDGGKITVSMKTTDSQ LIVSISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTGLGLSIAKEIVKQHKGFIWAKS EYGKGSTFTIVLPYDKDAMMVDEWEM >gi|311101497|gb|AEKO01000005.1| GENE 128 123980 - 124792 796 270 aa, chain + ## HITS:1 COG:SPy0530 KEGG:ns NR:ns ## COG: SPy0530 COG1235 # Protein_GI_number: 15674630 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Streptococcus pyogenes M1 GAS # 6 270 5 269 269 446 84.0 1e-125 MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILV THEHKDHIHGVGVLARKYGMDIYANEKTWQIMDSKNMLGKIENSQKHVFSRDKLLTFGDI DIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMAGIIENADGYLIESNHDIEIL RAGSYPWSTKQRILSDQGHLCNEDGADAMIRSIGNKTKKIYLGHLSKENNIKELAHMTME NQLARADFGVGTDFKVFDTSPDTATPLTDI >gi|311101497|gb|AEKO01000005.1| GENE 129 124853 - 125212 304 119 aa, chain + ## HITS:1 COG:SP1261 KEGG:ns NR:ns ## COG: SP1261 COG2832 # Protein_GI_number: 15901121 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 119 1 119 119 135 74.0 1e-32 MKVIYLSLGFVSLGLGILGIPLPILPTTPFLLLAIACFAKSSKRFEKWLYNTKLYQTYVA DFRETKSIAKERKKRIIIQIYVLMGISIVFAPIIWVKIALFCLTLFITYYLFKVIPDKD >gi|311101497|gb|AEKO01000005.1| GENE 130 125267 - 126481 1166 404 aa, chain - ## HITS:1 COG:SP0615 KEGG:ns NR:ns ## COG: SP0615 COG2348 # Protein_GI_number: 15900523 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 1 404 1 404 406 454 55.0 1e-127 MYTYKTGLSTSEHDRFVIDSPQTNLLQSSSWAKIKDSWGNDRLGFYQDGNLVAVASVLIQ PLPLGFSMIYIPRGPIMDYQNKELLAFVIASLKKYAKTKRALFVKFDPSLFVTKSLISQE AEIRKETMAIAKYIQALGIEWTGLTEDMAENIQPRFQANIHKEDFTEEQLSKSTKQAVRT ARNKGISVQFGGTELLEQFASLMKKTEARKNIHLRGIDYYEKLLTTYPESSYITLSTLDL PARLKDLNKQLEKNIADAAKFTEKTKPGKIENNKQEHKRLKEEIDFLQEKVDAGNKTVPL SGTLVLEFGKTSENIYAGMDEDYRRYQPAILTWYETANHAFERGSEWQNMGGIENSLDGG LYNFKSKFNPRIEQFIGEFNLPVSPLYGLANFAYKLRKKLRSKH >gi|311101497|gb|AEKO01000005.1| GENE 131 126483 - 127292 996 269 aa, chain - ## HITS:1 COG:SP1291 KEGG:ns NR:ns ## COG: SP1291 COG0561 # Protein_GI_number: 15901151 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 268 1 268 268 415 77.0 1e-116 MSIKLIAVDIDGTLLNSQRQVTPEVFQAIQDAKAAGVKVVIATGRPIPGVLPLLEELNLN QDGDYVITFNGGLVQETSTGNELIRETLSYEDYLDIEVLANKLGVHSHAITKDGIYTSNR NIGRYTVHESTLVHMPIYYRTPEEVADKEFVKAMYIDEPEILDAAIAKLPQEFYDRFTIV KSTPFYLEILKKTANKGIAVTHLAEKLGLSKEETMAIGDEENDRAMLEVVGSPVVMKNGN PEIKKIAKHITKSNDESGVAYAIRKWVLD >gi|311101497|gb|AEKO01000005.1| GENE 132 127471 - 128334 628 287 aa, chain + ## HITS:1 COG:SP0590 KEGG:ns NR:ns ## COG: SP0590 COG0456 # Protein_GI_number: 15900499 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 286 294 408 70.0 1e-114 MIRFTNQLTDKERKEAKALIASCQAHDQTFREPYLSNMFNFDPNMPAFFLYYQEEELLGL LTVYADDEDVELSILVHPNHRRKGIARALFKSFKEETASYPIRSVTFQTERVFLDGHPDL ASHWGLIENEETETWLGRDRTPYVLESRSDVKVLLAEPSNLEEITQLHHQAFSEAEETLE VPHRYIVEALKDSDSLLYILLKEGQVIGVCTVDLSGNSNYLYGIVVAEAYRGQGYGSYLA KSVVNQLIEQNDKSFQIAVEDDNIGAKRLYEKIGFVKQTQVVYLKQI >gi|311101497|gb|AEKO01000005.1| GENE 133 128409 - 128795 294 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149007043|ref|ZP_01830712.1| 50S ribosomal protein L19 [Streptococcus pneumoniae SP18-BS74] # 5 127 1 120 121 117 47 4e-25 MKIKIKNKIKVGDQTEIIEEIHTCEVMEKGDYTYLVHHNSEKEKVVIKLNKEELVMTRFS NPKSIMRFSAKVPALVRIPTPLGTQHFLTDTSLFAHDPNGQTLDVHYQLKHPETEDVFAD YELEVSWF >gi|311101497|gb|AEKO01000005.1| GENE 134 129060 - 131744 3087 894 aa, chain + ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 1 894 1 893 893 1416 82.0 0 MSKEQNKTLFYTQGEEEVLKNLDTSVDGLSTAQAKERLDAYGYNELDEGEKRSLLSKFID QFKDLMIIILLVAAALSVITEGIHGLTDACIILAVVVLNAAFGVYQEGQAEAAIEALKNM SSPRARVRRDGHVVEIDSRELVPGDIVLLEAGDVVPADMRLLEAASLKIEEAALTGESVP VEKDITETVAADAGIGDRVNMGYQNSNVTYGRGTGVVTNTGMYTEVGKIADMLANADESQ TPLKQSLEQLSKTLTYLIVAIALVTFLVSVFIRGEQPLEGLMVAVALAVAAIPEGLPAIV TILLSLGTTTLAKRNSIVRKLPAVETLGSTEIIASDKTGTLTMNQMTVEKVYTNGQLQNA DTELSADNTTLRIMNFANDTKVDPDGKLIGDPTETALVQFGLDHNFDVREVLKSEPRVAE LPFDSDRKLMSTIHKEADGTYFVAVKGAPDQLLKRVTQIEINGEVRSITDEDKKAILATN KDLAKQALRVLMMAYKTTSEIPTLESEVVESDLIFSGLVGMIDPERPEAAEAVRVAKEAG IRPIMITGDHQDTAEAIAKRLGIIDPNDTEDHVFTGAELNELSDEEFQKVFKQYSVYARV SPEHKVRIVKAWQNDGKVVAMTGDGVNDAPSLKTADIGIGMGITGTEVSKGASDMVLADD NFATIIVAVEEGRKVFSNIQKSIQYLLSANMAEVFIIFFATLFGWDVLQPVHLLWINLVT DTLPAIALGVEPAEPGIMTHKPRGRQSNFFDGGVFGAIMYQGVFQTILVLAVYGWGLAFP EHHTQAEIHADALTMAFATLGLIQLLHAFNVKSVYQSVFKVGLFRNKTFNWAIPVAFVLL MATIVVPGFNNLFHVSHLSLTQWLAVIVGSFLIVVSVELVKAIQRALGKDKDAI >gi|311101497|gb|AEKO01000005.1| GENE 135 131854 - 132600 796 248 aa, chain + ## HITS:1 COG:lin0935 KEGG:ns NR:ns ## COG: lin0935 COG0778 # Protein_GI_number: 16800005 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Listeria innocua # 1 243 1 241 246 179 41.0 5e-45 MNETIKTQLNHRSIRQFKPVTLTQEEVNLLVDVARHTSTSNFRQSYSIISITDQKLKEEI AEIANQPYIPNAGHLFVFVVDQRRNTLIAEAKGAEALVQGSPERFISAFSDAMIAAQNVV VAAESLGMGTVYLGSILNDNAKLSELLKLPKYVYPAVGLAVGWPDQEPQLKPRLPRHVIH MENYYQDLENPLEELKDYDAEVHEYYDLRDLNNRVDEFTTQIAKTMDKSVANRANTLKDL QKQGFFTD >gi|311101497|gb|AEKO01000005.1| GENE 136 132626 - 133267 352 213 aa, chain - ## HITS:1 COG:L197075 KEGG:ns NR:ns ## COG: L197075 COG1409 # Protein_GI_number: 15672952 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Lactococcus lactis # 1 157 78 243 243 108 40.0 1e-23 MLDLEDKLIDNLDFQVIDLGSKTLLAFHGWYDYSYSDEKLDKILKRKKQLWFDRRLMRLG TDPEICQRSLKKLDNILNDLDTNNLIVAMHCVPHSRFTMTHERFAPFNAYLGSEEFHQIF VKHGVKDAVFGHAHRSYGTVTIDGITYHSRPLGYRREWDLTIDFVSNHPELNPTGTWNLS KRYNLVKKRPEFLEYKKKELANEFLSSMTLFDL >gi|311101497|gb|AEKO01000005.1| GENE 137 133279 - 133482 78 67 aa, chain - ## HITS:1 COG:no KEGG:str1147 NR:ns ## KEGG: str1147 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 54 28 81 312 92 83.0 4e-18 MTRLAVMSDLHIDLNHFETYEIDTLIKCLKDQEVSHLHIAGDISNHFLLTRNLFYENCLR RSRSPII >gi|311101497|gb|AEKO01000005.1| GENE 138 133603 - 134694 944 363 aa, chain + ## HITS:1 COG:SPy0642 KEGG:ns NR:ns ## COG: SPy0642 COG1600 # Protein_GI_number: 15674712 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Streptococcus pyogenes M1 GAS # 1 362 27 390 391 617 79.0 1e-176 MAKEIGISKIGFTTADDFAYLEKSLRLGVEEGRTTGFEHKNIEERIYPKLTLESAKTIIS IAVAYPHKLPQQPPKTEYKRGKITPNSWGLDYHYVLQDKLKRLAEGIEKLTENFEYKGMV DTGALVDTAVAKRAGIGFIGKNGLVISKEYGSYMYLGELITNLEIEPDQEVDYGCGDCRR CLDACPTSCLIGDGTMNARRCLSFQTQDKGMMDMEFRKKIKTVIYGCDICQISCPYNRGI DNPLASDIDPELAMPELLPFLELTNKSFKEKFGMIAGSWRGKNILQRNAIIALANLHDRN AIVKLMEIIDKNNNPIHTATAIWALGEIVKKPDEAMLDYMSNLSLKDEDAQAEWELVCAK WQI >gi|311101497|gb|AEKO01000005.1| GENE 139 134865 - 135845 979 326 aa, chain + ## HITS:1 COG:SPy0643 KEGG:ns NR:ns ## COG: SPy0643 COG1186 # Protein_GI_number: 15674713 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Streptococcus pyogenes M1 GAS # 1 326 12 337 337 566 89.0 1e-161 MTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEEDDSIQEELEET LEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLLRMYQRYGNAKGFK VETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEV MPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG NRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE VAQVDKVMDGDIEGFIDACLKWRMEE >gi|311101497|gb|AEKO01000005.1| GENE 140 135918 - 136625 254 235 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 1 202 122 323 398 102 33 2e-20 MNTDIMALIELKDVTKKYDKSTTALRHIDLSVNSGEFVYLVGPSGAGKSSLIRLFYQEEK LTSGSMKVGEFDLTRLRKKDVPLLRRSIGVVFQDYKLLPKKTAFENVAYAMEVIGEKPRH IKKRVAEVLELVGLKHKMRSFPNQLSGGEQQRVAIARAIVNNPKVLIADEPTGNLDPEIS WEIMQVLERINLQGTTIIMATHNSTIVNNLRHRVLAIEEGRIVRDEEEGEYGYHD >gi|311101497|gb|AEKO01000005.1| GENE 141 136618 - 137547 1006 309 aa, chain + ## HITS:1 COG:SPy0645 KEGG:ns NR:ns ## COG: SPy0645 COG2177 # Protein_GI_number: 15674715 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Streptococcus pyogenes M1 GAS # 1 309 4 312 312 319 50.0 5e-87 MIRRFFRHLGESIKNLKRNLLSTLTAVFSVMIVLSLLGVFGSVILNTQKLASDIEKNIQV NVYLDPDSSDASKTVKELSGQIVANKDYHKIYDALTKIKGVDKVTFSSKEEQKKQLIETM GSSFETATGDANPLSDVYIVQTKSPDDVSRVAKEAKAIQGVDNANFGGSDTEILMSTMKR VQFWGIIATALLTIVAVLLISNTIRITIMSRATEIQIMRLVGAKNSYIRRPYLMEGAWIG ALGAIIPSGLIYLLYHMVYSSLNPDFVKGGISMYDPEWFVYAVIGTLFAVGIIIGSIGSR MAMRRYLKY >gi|311101497|gb|AEKO01000005.1| GENE 142 137703 - 138185 458 160 aa, chain + ## HITS:1 COG:SPy1010 KEGG:ns NR:ns ## COG: SPy1010 COG0494 # Protein_GI_number: 15675013 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 158 1 158 158 278 87.0 2e-75 MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHF TVTEMNFKGMITFPEFTPGHDWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLTKPT WEGDYEIFKWILEDRPFFSAKFVYDSNQNLVDKTVTFYDK >gi|311101497|gb|AEKO01000005.1| GENE 143 138195 - 139373 1047 392 aa, chain + ## HITS:1 COG:SPy1011 KEGG:ns NR:ns ## COG: SPy1011 COG0628 # Protein_GI_number: 15675014 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 10 392 10 393 393 404 59.0 1e-112 MSRKKTEKFSETWFFMWILNNQVVMAFLILLLIGLTVLIFTKISPIFSPVIQFLTIIMLP LVISMLLYYLIKPLVLLVEKTGLNRTMSILLIYAILALLLVWGISTAIPNLQDQILILIR NAPSYIARANSETERWLKLPILSNFHGDLEAVLSDFSARMVNYAEHFSTSALTWIGTFAS TVARVTVAIILTPFILFYLLRDSQKMKHSFVSALPTRFRKTTVRMLSDINSQLEGYVQGQ VTVAIVVAIMFCIMFKIVGLRYGMTFGILAGFLNMIPYLGSFLAMVPVVIMGLVQGPAML IKVLIIFVIEQTIEGRFVSPLVLGNKLSIHPITIMFILLTAGSLYGVWGVLLGIPIYASV KVVVREIFDWYRSVSNLYQDDLENEGQKDDVK >gi|311101497|gb|AEKO01000005.1| GENE 144 139363 - 140592 1329 409 aa, chain + ## HITS:1 COG:SPy1012 KEGG:ns NR:ns ## COG: SPy1012 COG0457 # Protein_GI_number: 15675015 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Streptococcus pyogenes M1 GAS # 1 407 1 407 415 436 64.0 1e-122 MLNSEKMVASIGNQDLDHADKYFKKALREDPAEVLVELGQYLESIGFLPQAQEIYEKVRF DFPEVNVNLAQIVAEDGDIEEAFLYLDAIPEDSDDYLSALIVKADIYQMEGLTDVARDKL LEASQLSDDSLIIFGLAEMEFELGNFEQAIQYYAKLDNRDLLAMTGVSTYERIGKAYASL GKFEAAREFLEKAIEIEYDDTTAFELATLLYDQEEYQKANFYFKQIETMSADFEGYEYVY ALSLHAEHKTEEALRMAQQGISKNAFDVQLLLLASQLSYELHDTQSAESYLKQALPLAED QDEIVLRLSTLYLEEERYEDLVALADYEVDSVLARWNIARAYQALDDEEEAFQIYQDLSK DLADNPEFLQDYAYILREFGYRDQARVTAEKYLALVPDDVNMQTFLEDY >gi|311101497|gb|AEKO01000005.1| GENE 145 140715 - 141272 597 185 aa, chain + ## HITS:1 COG:SPy1281 KEGG:ns NR:ns ## COG: SPy1281 COG0681 # Protein_GI_number: 15675234 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Streptococcus pyogenes M1 GAS # 1 185 1 185 185 171 52.0 5e-43 MVKRDLIRNIIIAVLAIVVILLLRAFVLSTHRVTEGQANDYIHAGDYVTFNKNVEPHNKD FILYTVNGKEYIGRVIADEGKSVTAMDDFLYINDKSVDEAYISKDKSAYLATVSPGNFFT DDFSIATLTDNKQTKIEKGQYLVLNDNRRNTDDSRKFGLIEKDQIKGVISFRLYPLSRFG FVDVD >gi|311101497|gb|AEKO01000005.1| GENE 146 141478 - 142701 1122 407 aa, chain + ## HITS:1 COG:SP1008 KEGG:ns NR:ns ## COG: SP1008 COG2195 # Protein_GI_number: 15900880 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Streptococcus pneumoniae TIGR4 # 1 405 1 404 407 634 77.0 0 MAYDLLLERFLRYVKINTRSDENATRTPTTQSQVDFALNILKPELEELGLSNVHYLESNG YLVATLPANDDQLTRKIGFISHMDTADFNAEGVSPQVIESYDGGIIPLGTSGYNLNPTDF PNLQNYIGHTLITTDGTTLLGADDKSGIAEIMTALAHLKAHPEIKHCEIRVGFGPDEEIG IGADKFDVDDFDVDFAYTVDGGPLGELQYETFSAAGAELTFHGRNVHPGTAKGQMVNALQ LAIDFHNQLPAEDRPELTDGYQGFNHLQTMTGTVEEANSSYIIRDFETESFENRKATFQE IADKMNQAYGQTRVDLVIKDQYYNMRQVIEKDMMPVELAKEVMEDLGIVPVIEPIRGGTD GSKISFMGIPTPNLFAGGENMHGRYEYVSLQTMEKAVDVILGIVSNP >gi|311101497|gb|AEKO01000005.1| GENE 147 142758 - 143258 300 166 aa, chain + ## HITS:1 COG:no KEGG:str1138 NR:ns ## KEGG: str1138 # Name: not_defined # Def: pore-forming peptide, putative # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 166 1 166 166 291 96.0 5e-78 MIKIFGKYRYHWQPELSWLIIYWSLAITPIFIAAALLFELYSVPSHILMLFTIFVALFGL GFHRYFIIEDYGILRIVSFNIFKPRKVQISDIEKVEVIKTGLCLIFKNGKKRQFYMRKWP KKYFLDALALHPDFKGEVELMDYMTNFDYFAFYEESKKALKIKLRK >gi|311101497|gb|AEKO01000005.1| GENE 148 143242 - 143439 161 65 aa, chain - ## HITS:1 COG:SP1605 KEGG:ns NR:ns ## COG: SP1605 COG1141 # Protein_GI_number: 15901445 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Streptococcus pneumoniae TIGR4 # 1 62 1 63 68 80 66.0 5e-16 MKVSLIPEKCIACGLCQTYSPVFDYDDEGIVRFKDSDQLIRTIENSPETLTAVKSCPTKA LICEV >gi|311101497|gb|AEKO01000005.1| GENE 149 143485 - 144114 241 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148997664|ref|ZP_01825228.1| hypothetical protein CGSSp11BS70_02114 [Streptococcus pneumoniae SP11-BS70] # 31 209 8 158 158 97 35 6e-19 MSKKPWEDKVSEEELEEVVDADFLDDEDEFEDFEEEEDTPSDEKQEKGGFINSSFLTVLL GLFFIIVVCILFFVFYTSNVGGSKTAASKESSGFSSTSTSKVVKSSSSEKDSGKGEDSEK STKEKSSSTKVSSSSKHVEKDYATGSAETTPSSAAAATDGSSIVVQSGEGAGSIAARAGI SVDELERLNPDHMTSGYWYANPGDVVNVQ >gi|311101497|gb|AEKO01000005.1| GENE 150 144136 - 144804 570 222 aa, chain + ## HITS:1 COG:SPy0803 KEGG:ns NR:ns ## COG: SPy0803 COG0283 # Protein_GI_number: 15674845 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 177 1 177 226 259 74.0 2e-69 MKDIRIAIDGPASSGKSTVAKIIAKNLGYTYLDTGAMYRSATYLALQNGLTEENVPEILE QLSQHPISFGKAADGSQQVYVGDVDITHPIRDNQVTNNVSWVAAIPEVRQELVAQQQRIA QDGAIIMDGRDIGTVVLPDAELKIFLIASVDERAERRYKENIEKGISTDLETLKKKLLNV TIKIVIVRYHLLNQRKMPLLLTLQECQLRVLWNLFKKKQKNY >gi|311101497|gb|AEKO01000005.1| GENE 151 144974 - 145504 433 176 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 11 171 1 163 166 171 53 3e-41 MKIIAKKDLFINDEIRVREVRLVGLDGEQLGIKPLSEAQAIADDANVDLVLIQPQATPPV AKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFETKLRNGRKFLEKGNKV KVSIRFKGRMITHKEIGAKVLAEFAEKTQDIAIIEQRAKMDGRQMFMQLAPIPDKK >gi|311101497|gb|AEKO01000005.1| GENE 152 145543 - 145743 342 66 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477493|ref|ZP_04062129.1| ribosomal protein L35 [Streptococcus salivarius SK126] # 1 66 1 66 66 136 100 1e-30 MPKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKASMVHSGDFKRIKS MLSQMR >gi|311101497|gb|AEKO01000005.1| GENE 153 145800 - 146159 594 119 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821143|ref|YP_139585.1| 50S ribosomal protein L20 [Streptococcus thermophilus LMG 18311] # 1 119 1 119 119 233 100 7e-60 MARVKGGVVSRKRRKRVLKLAKGYYGAKHILFRTAKEQVMNSYYYAYRDRRQKKRDFRKL WITRINAAARLNGLSYSQLMHGLKLAEIEVNRKMLADLAVNDAAAFTALADAAKAKLGK >gi|311101497|gb|AEKO01000005.1| GENE 154 146224 - 147213 438 329 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 328 90 421 422 370 61.0 1e-102 MAETSIVEKNCQISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDK LPAVMSWDEFGFKKGKLAFVAQNYETNELITILDNRRQTTIRNYFLKYPLKARQQVQFIT MDMSGAYIPLAKKLFPNAKIVLDRFHIIQHLGRAFLKTRIATMNQFDKKSLPYRALKNHW RLFQKDSRKLSLNSFYSKTFRQTLAPHEVVEKTLGFSKELTDYYTLYQLLLFHFQEKRVD EFFELIEENRSKVNHYFQTVFRTFLRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFG FRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311101497|gb|AEKO01000005.1| GENE 155 147255 - 147479 113 74 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 63 1 63 422 69 57.0 1e-12 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKTLK SLFSNKLELQLYYV >gi|311101497|gb|AEKO01000005.1| GENE 156 147609 - 148094 454 161 aa, chain + ## HITS:1 COG:SP1592 KEGG:ns NR:ns ## COG: SP1592 COG0454 # Protein_GI_number: 15901434 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 109 160 15 66 67 74 65.0 6e-14 MEVIMIRLARAEDIPRLQELLGQILLVHHHARPDVFKSEGSKFTDVELEAVINDPNKPIF VYEAKDGRILGHLFLMIKEVSDNNGPLKAVKTLFIDDLCVDKEARGQKLGEKLYQFALDY AKELGCYNLTLHVWNDNEGAVRFYERLGMKPRYTEMESILK >gi|311101497|gb|AEKO01000005.1| GENE 157 148344 - 148688 256 114 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0903 NR:ns ## KEGG: GALLO_0903 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 93 55 147 152 92 50.0 3e-18 MLLVGPLAKTIAFAILHKVKAHDKRWAKILVISGTMALFMVTFMSFYGLVYNSHLVTLLS YGRAWLTNVIMALPLNFLVVGPISRFILGKLQKPLPGEGVVENFDDDDELPTII >gi|311101497|gb|AEKO01000005.1| GENE 158 148759 - 148944 315 61 aa, chain - ## HITS:1 COG:SPy1139 KEGG:ns NR:ns ## COG: SPy1139 COG1942 # Protein_GI_number: 15675116 # Func_class: R General function prediction only # Function: Uncharacterized protein, 4-oxalocrotonate tautomerase homolog # Organism: Streptococcus pyogenes M1 GAS # 1 61 1 61 61 97 85.0 6e-21 MPFVKIDLFEGRSEEQKIELAREVTEVVSRVAKAPKEAIHVFINDMPEGTYYPHGEMKKK N >gi|311101497|gb|AEKO01000005.1| GENE 159 149174 - 150580 1407 468 aa, chain + ## HITS:1 COG:SPy1070 KEGG:ns NR:ns ## COG: SPy1070 COG0624 # Protein_GI_number: 15675062 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Streptococcus pyogenes M1 GAS # 2 468 3 469 469 699 74.0 0 MTIDFRAEVDKRKEALMEDLFGLLRINSERDDSKVDEKHPFGPGPVKALEHFLALAERDG YKTRNIDNYAGDFEFGQGDEVLGIFAHLDVVPAGSGWDTDPYEPVIKEGKLYARGSSDDK GPTMACYYALKIIKELELPVSKRVRFIVGTDEESGWGDMDYYFAHNGLKDPDFGFSPDAE FPIINGEKGNITAYLHFEGQNDGDFSLVSFNGGMRENMVPESASAEFTAPITLQELESKL NDFVADQEVTGQVTEEAGAFHVTIHGKSAHGMMPQNGINGATYLALFLSQFDFQANAKTY LNLVAETLHQDFFAEKTGLAYTDSKMGELTMNAGVFTFNKESEDNTIALNFRYPQGVDTD DIKTCLEKLEEPKAVSLSEHGHVPHYVPVSDPMVQTLLSVYEKQTGLKGHEQIIGGGTFG RLLKRGVAYGAMFPGYVNTMHQANEFTEVEDLYRAAAIYAEAIYELVK >gi|311101497|gb|AEKO01000005.1| GENE 160 150620 - 151204 756 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 1 192 1 192 192 295 68 1e-78 METLEELTQAIMDDEQNKTYTEQGIKPLFSIPKTARINIVGQAPGIRAQESGLYWNDPSG DNLRDWMGVSREDFYESGMFAIVPMDFYFPGHGKSGDLPPRKGFADKWHERVLDLAPNIQ LTILVGNYAQRYYLHQKSSAKLTDTVKHYKDYLPDYFPLVHPSPRNNIWQAKNPWFMKEV VPDLKALVQKILSQ >gi|311101497|gb|AEKO01000005.1| GENE 161 151702 - 152382 689 226 aa, chain + ## HITS:1 COG:SPy0889 KEGG:ns NR:ns ## COG: SPy0889 COG0120 # Protein_GI_number: 15674914 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 223 1 222 227 317 77.0 1e-86 MEELKKLAGVRAASFVGDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSSQTTKQ AEGLGIPLKSVDDIDSIDVTVDGADEVDPQLNGIKGGGGALLMEKIVATPTKEYIWVVDE SKMVEQLGAFKLPVEVVQYGADRLYRVFESKGYKPSFRLTEQGDRFVTDMKNFIIDLDLG KINNPVALGDELKAMTGVVDHGLFNGMVNKVIVAGKDGVKIVEVKD >gi|311101497|gb|AEKO01000005.1| GENE 162 152525 - 153718 1395 397 aa, chain + ## HITS:1 COG:SP0829 KEGG:ns NR:ns ## COG: SP0829 COG1015 # Protein_GI_number: 15900716 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Streptococcus pneumoniae TIGR4 # 1 397 7 403 403 749 91.0 0 MHLIVLDSVGIGAAPDANNFVNAGVPDGASDTLGHISKTVGLNVPNMAKLGLGNIPREQA LKTVPAESNPTGYATKLEEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEEILTQIEEF SGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPVEELYRIC EFARSITLERPALLGRIIARPYVGEPGNFTRTSNRRDLAVSPFAPTVLDKLNEAGIDTYS VGKISDIFNGEGINHDMGHNKSNSHGVDNLIKAMTSEEFKHGFSFTNLVDFDALYGHRRN PHGYRDCLHEFDERLPEIIAAMKEDDLLMITADHGNDPTYAGTDHTREYIPFLAYSPAFK GSGLIPVGHFADISATIADNFGVEKAMIGESFLDKLV >gi|311101497|gb|AEKO01000005.1| GENE 163 153720 - 154262 253 180 aa, chain + ## HITS:1 COG:SP0830 KEGG:ns NR:ns ## COG: SP0830 COG3797 # Protein_GI_number: 15900717 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 180 1 180 180 196 56.0 2e-50 MKRYALLVRGINVGGRNKVVMEKFRHDLDKLGFKNVSSYINSGNFFFDSPMMKEELLLVI EEFLNKSYSFITVFSLFTLEEYQNECKSLPKWWENDLYRKDVLFYTVQLDKDQLKRVINS FDLADETLHFGELGIYWGKYDKTSYNQTAYHKNLLKSSFYPYITIRNARTFSNIGHYLKK >gi|311101497|gb|AEKO01000005.1| GENE 164 154282 - 155091 982 269 aa, chain + ## HITS:1 COG:SP0831 KEGG:ns NR:ns ## COG: SP0831 COG0005 # Protein_GI_number: 15900718 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 269 1 269 269 455 88.0 1e-128 MSLLEKIRVTQAFLESKGIEKPEFGLILGSGLGELAEEVQDAIVIDYADIPNWGQSTVVG HAGKLVYGTLSGRKVLALQGRFHFYEGNPLEVVTFPVRVMKALGCEGVIVTNAAGGIGFG PGTLMTITDHINMTGQNPLIGENLDDFGPRFPDMSKAYTPEYRATAHEVAKKLGIKLDEG VYIGVTGPTYETPAEIRAYKTLGADAVGMSTVPEVIVAAHSGLKVLGISCITNHAAGFQE ELNHEEVVEVTERIKGDFKGLLKAILAEL >gi|311101497|gb|AEKO01000005.1| GENE 165 155095 - 156342 589 415 aa, chain + ## HITS:1 COG:SPy1379 KEGG:ns NR:ns ## COG: SPy1379 COG0038 # Protein_GI_number: 15675309 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Streptococcus pyogenes M1 GAS # 26 403 45 424 437 137 28.0 5e-32 MISQVRRRLRLLLKFLKLSLAVIGTGVASGVVGIFCHYLLEFIQVLAFGKDKGNLLLQFQ SVSAFRRLSVLLVVGVLSSLFWYFLQRRVTLLSISKAKKLVGKRSPNFLGQSLHALIQVA IVAAGASIGKEGAPRELGALFGGSLSKGLHLDISDRQLLIACGAGAGLASVYQVPFASAL FVLETLGVSWTLKNIIIIFATTYVSDYCAKPIVGGHALYIVDTVTIDSSSFIQAIILALF VTPFAIIFGYFAKKASSHRITGKEILWTLPFAFLILGGLSANLPIFMGNGQVLAQWIFSG NSSAYLPVILIIKCLLVCLLLRSGAYGGTLTPSFALGVGTGYLITVLLGNFGFSHSLSLG MLLGATVFLGTTLDAPLTGIALVVGFTGTGGIIVFPLILASILSRIINNKWKKRL >gi|311101497|gb|AEKO01000005.1| GENE 166 156324 - 157052 774 242 aa, chain + ## HITS:1 COG:STM2437 KEGG:ns NR:ns ## COG: STM2437 COG0518 # Protein_GI_number: 16765757 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Salmonella typhimurium LT2 # 6 239 1 232 239 242 49.0 4e-64 MEEKIMNIHFILHEKFEVPGAYLKWAQKRGHHISSTKVYEKEKLPETVDDIDFLIVMGGP QSPDEDRQVFPYYDPKAEITLIQKAIDADIYIVGVCLGAQLLAGAYGGKYEHSPEREIGV FPLTLTEEGLADEHIKDFGSTLNTGHWHGDMPGLTDKAVVLATSQGCPRQIVRFSPKHYA FQAHLEFDLEAIDLLIAADGEEHLCQQNKQLPFVQTPDQLRKNDYSEMNKKLFAFLDSLI QI >gi|311101497|gb|AEKO01000005.1| GENE 167 157390 - 158100 764 236 aa, chain + ## HITS:1 COG:SP0835 KEGG:ns NR:ns ## COG: SP0835 COG0813 # Protein_GI_number: 15900722 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 236 1 236 236 429 93.0 1e-120 MSIHISAKQGDIADKILLPGDPLRAKFIAENFLEDAVCFNEVRNMFGYTGTYKGERISVM GTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNKNVHVRELVLAQAAATNSNIIRNDW PQYDFPQIASFNLLDKAYHIAKNFGMTTHVGNVLSSDVFYSNYFEKNIELGKWGVKAVEM EAAALYYLAAQHQVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAD >gi|311101497|gb|AEKO01000005.1| GENE 168 158445 - 159905 1334 486 aa, chain + ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 484 1 479 481 388 49.0 1e-107 MSSRTKRKQKRTNNRSWVMVNFGLTILYAILAAVLLFTMFNYNFLSFRFLNIIITFGLLL VLAVSIFFQKTKKSPLVTTVVLVIFSLSSLVGIFGFKQLIDITNRMNQTAAFSEVEMSIV VPKDSDIKDVSQITSVQAPIKIDKKNIDTLMSALKDDKKVDVKVDDVASYQEAYDNLKSG NSQAMVLSGSYASLLESVDSDYASNLKTIYTYKIKRKNNGSAKQVDSKVFNIYISGIDTY GSISTISRSDVNIIMTVNMNTHKILLTTTPRDAYVKIPGGGANQYDKLTHAGIYGVETSE QTLENLYGINIDYYARINFTSFLKLIDQLGGVTVHNDQAFKSLHGKFDFPVGDIQMNSEQ ALGFVRERYSLDGGDNDRGKNQEKVISAIVNKIASLHSVSNFTSIVNNLQDSVQTNMSLD TINALANTQLDSGTKFTVTSQAVTGTGSTGQLTSYAMPNSSLYMMKLDDSSVESAAQAIK NMMEEK >gi|311101497|gb|AEKO01000005.1| GENE 169 159906 - 160637 467 243 aa, chain + ## HITS:1 COG:SP0347 KEGG:ns NR:ns ## COG: SP0347 COG4464 # Protein_GI_number: 15900276 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 1 243 1 243 243 311 61.0 5e-85 MIDVHSHIVFDVDDGPKTLEESLELIGESYAQGVRTIVSTSHRRKGMFETPEDKIFANFS KVKEKAEALYPDLTIYYGGELYYTSDIVEKLEKNLIPRMHNTQFALIEFSARTSWKEIHD GLSNVIRAGVTPIVAHIERYDALEENADRVREIINMGCYTQVNSSHVLKTKLFGDKEKVR KKRVRFFLENNLVHIVASDMHNLGPRPPFMKDAYAIIKKTYGTRRARNLFIDNPQTLLEN QYI >gi|311101497|gb|AEKO01000005.1| GENE 170 160646 - 161338 822 230 aa, chain + ## HITS:1 COG:SP0348 KEGG:ns NR:ns ## COG: SP0348 COG3944 # Protein_GI_number: 15900277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 1 230 1 229 230 211 52.0 7e-55 MTQENTKRVEIDVLALLHKLWSKKVFILFTAFYVAVFAFLGTYFLIQPTYTSSTRIYVAN QTNDSKNISAQDLQAGTFLTKDYKEIITSNDVLSEVIKDEKLKMTEAELAKKISVNIPTD TRLISISVSAKTGQDAQLLANKVREVASEKIKNVTKVEDVTTLEDAKLPESPSSPNIKRN VLIGAVFGVFLAVVGVLGREILDDRIRRPEDIEETLGMTLLGIVPDTDKI >gi|311101497|gb|AEKO01000005.1| GENE 171 161348 - 163519 1650 723 aa, chain + ## HITS:1 COG:SP0349 KEGG:ns NR:ns ## COG: SP0349 COG0489 # Protein_GI_number: 15900278 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Streptococcus pneumoniae TIGR4 # 1 225 1 225 227 271 58.0 3e-72 MPLLKLVKSKVQFAKQTEEYYNAIRTNIQFSGAQMKVISISSVEAGEGKSTTSVNLAISF ASVGLRTLFIDADTRNSVLSGTFKSNAPYKGLSNFLSGNADLNETICQTNISGLDVIASG PVPPNPTSLLQNDNFRHLMDVARSRYDYVIIDTPPIGLVIDAAIIAHQADASILVTAAGK IKRRFVAKAVEQLEQSSPQFLGVVLNKVDMTVDKYGSYGSYGSYGSYGEYGKKENKKKVI QEHIVVEKDSVNGDNAAPYALIFKEELRVKEKQEIRRIEIGVVQLVVVVFAAWLASKLPY TEITKGSMVILGVVHVVTYYISSYYENLKYRGYLDELIATVKYGFIFALVVTFLSFFADG DFSISRRGLLYVTLITCTLLYLTNTLLRYFRSSIYTRRKGNKNILLISDQARLEDVLIRM KDNMDGRITAVCVLDNPYFTSPFIKSVKPENLVEYATHSVVDQVLINLPSEQYKIWDYAS PFELMGIPVSINLNSLEFMSQGKKRIQQLGPFNVVTFSTQFYSYGDIVAKRFLDICGALF GLLLCGLVGIFLYPLIRRDGGPAIFVQDRVGENGRIFKFYKFRSMRVDAEEIKKNLMSQN KMSGGMFKMDNDPRITKIGHFIRKTSLDELPQFWNVLKGDMSLVGTRPPTLDEYESYTPE QKRRLSFRPGITGLWQVSGRSEITDFDEVVKLDVAYMDDWTIWRDIRILLKTIKVVVKKD GAK >gi|311101497|gb|AEKO01000005.1| GENE 172 163552 - 164724 1298 390 aa, chain + ## HITS:1 COG:SPy0786 KEGG:ns NR:ns ## COG: SPy0786 COG0438 # Protein_GI_number: 15674830 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 3 388 2 380 384 381 48.0 1e-105 MTKTVYIVGSKGIPAKYGGFETFVEKLTEFQQDKDIQYYVACMRENSAKSGITADTFEHN GAKCYNIDVPNIGPARAIAYDIAALNKAIEIAKENKDQAPIFYVLACRIGPFISSIKKKI RDIGGTLMVNPDGHEWLRAKWSLPVRKYWKISEQLMVKHADLLICDSKNIESYIQKDYAK YRPQTTYIAYGTDTTKSRLTKVDDKVRTWYFEKGVIENNYYLVVGRFVPENNYEAMIRGF MASNSDKDFVLITNVEENKFYDKLRQETGFDKDPRVKFVGTVYDQELLKYIRENAFAYFH GHEVGGTNPSLLEALESTKLNLLLDVGFNREVGEDGALYWKKDQLASVIDQAEQLDEQAI EDLNQKSSKRISEAFTWEKIVADYEKVFKG >gi|311101497|gb|AEKO01000005.1| GENE 173 164727 - 165875 1120 382 aa, chain + ## HITS:1 COG:alr3699 KEGG:ns NR:ns ## COG: alr3699 COG0438 # Protein_GI_number: 17231191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 3 350 2 346 382 144 30.0 3e-34 MQKILYLHAGAEMYGADKVLLELIKGLNKDEFEAHVILPNDGVLAGALESVGAKVKVIDY PILRRKYFNPKGILEYFGSYNRYSKKIAEYAKENGITLLHNNTTAVLEGIYLKRKLKLPL IWHVHEIIVKPKAISDFINFLMGRYADTIVTVSNAVANHVKQSRFVKNNQVQVIYNGVDN TVYHEMDAKAVRDQFGIAQDSLVIGMVGRVNAWKGQGDFLEAVTPILKANPKAVAFLAGS AFEGEEWRVDELEKAISDLPVARQIKRIDYYSKTTELYNMFDIFVLPSTNPDPLPTVVLE SMACGKPVVGYRHGGVCEMVKEGVNGLLATPNQPAELSKAIQELVEKTEKREQFGKASVK RQKELFSLQSYIRNFSELYKKY >gi|311101497|gb|AEKO01000005.1| GENE 174 165877 - 166518 439 213 aa, chain + ## HITS:1 COG:SP0907_2 KEGG:ns NR:ns ## COG: SP0907_2 COG3955 # Protein_GI_number: 15900788 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Exopolysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 22 211 5 191 191 132 36.0 7e-31 MNIEKIKNKLKPIVYPIINFIPRRRLKNKNFTIICDNCWAGKVYQELGLPYQTPFIGMFV FSPDYIKMLKNLKHYLSGNIPLKFVKESKYIKDFDNAYPLALLDDIELHFLHYADEKEAT QKWNRRLERIHWDNLYFKFNDNDACTYELMKEFEELPYKSKVIFSSKNYSDLPSLVHFKS AEKQGHVGIDLKTYHRYFNVVTWLNKGGEDLSK >gi|311101497|gb|AEKO01000005.1| GENE 175 166515 - 167483 605 322 aa, chain + ## HITS:1 COG:no KEGG:BDP_1837 NR:ns ## KEGG: BDP_1837 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 290 1 291 327 131 30.0 4e-29 MKKIRLIIPYFGKLPKFFPYFLLTAKRNQKIDFLIYTDQNVDQFEVLNADNIEFKTLSFD DLRKKVQSKFDFEISLKTPYKLCDYRAAYGLIFEEELKEYDYWGFCDTDVLLGDIYQFLE KHSFFENDYARYGLFGHLQIFKNSQEVNHVFMSGRGLNYRLDYHNVFTNEQTFIFDEADG IQKIFEKSNFKQLQDKFFHDIDISHFSFREYGENEPKRYYFWSEKNGLESIEIKENKLVV KHPLYVHFQKRTIECPEFEVVDSFYVIPNRLVVGDKISIQEIEKVTNNRFYWEYVKSTFL KKFKREKWTLGFIRHKLRMKSK >gi|311101497|gb|AEKO01000005.1| GENE 176 167750 - 168418 154 222 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|24637448|gb|AAN63722.1|AF454497_11 ## NR: gi|24637448|gb|AAN63722.1|AF454497_11 Eps6J [Streptococcus thermophilus] # 1 220 87 306 330 117 30.0 7e-25 MDPDDFLSDNFFDKISSNLKQKWDVLCFGYNEIKENKNTVLSCRPHFYTHCGLLRKNEFR NEFIELFKTDMMYNVWSRIYNKTFILKHDIRFPNKQIGEDTLFNFQVYRHLNTILFIDST LYNYIAGRSGSALTSFHPRRIEIQLDELQELHKLLEQFQLEDATLIQEIKTKIIVSATFQ ISNLNMRRKDKIELLRSIIANKAFYDIFQEIGIKLLGLIRRY >gi|311101497|gb|AEKO01000005.1| GENE 177 168583 - 169737 327 384 aa, chain + ## HITS:1 COG:no KEGG:LAF_1423 NR:ns ## KEGG: LAF_1423 # Name: not_defined # Def: hypothetical protein # Organism: L.fermentum # Pathway: not_defined # 44 368 74 403 424 124 31.0 7e-27 MLKIKFENLLVILVLTLIVGYDTLMTTMLNRTIPNLPVILLICFSLLLCFRFLYIKKFTF FYILTSILLLATSSVVFMSTGGTNFLLYSLLILLLYDADIDVILKTYVIVSGAIVLGVFV LSILGVIPNLQFAQVRSSVLVIRNSFGFIYPTDFASHCFYLFIAWGYILRKRLIVLRTLV GLSLSFFIIKFCDARLNALSVLLATVIFILMYVTKERKFKIYGILPYSAAIFSSIMFYLT YFFTWSSSLFVSLNNLFSMRLFLGKNAIDTYDIHLFGTTGVKFIGYGGTTESVYSYNYVD SSYIQMLFYYGVVPVVLLVLIYVIASKRIYKQGMFLFLALLSLITVNCMIEAFWVRPGYN IFMFALFASLLPNQYKTKDRIELS >gi|311101497|gb|AEKO01000005.1| GENE 178 169734 - 171149 1063 471 aa, chain + ## HITS:1 COG:SA0127 KEGG:ns NR:ns ## COG: SA0127 COG2244 # Protein_GI_number: 15925836 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Staphylococcus aureus N315 # 5 457 8 460 476 135 24.0 1e-31 MKVLKNYAYNLSYQLLVIVLPIITTPYVTRIFSSKDLGTYGYFNSIVTYFILLATLGVAN YGTKEISAHRKDIRKNFWGIYTLQLIATILSLALYTLLCLFFPGMQNMVAYILGLSLISK GMDISWLFQGLEDFRRITARNTTVKVLGVISIFLFVKTPGDLYLYVFLLTFFELLGQLSM WLPARSYIGDPHFDLSYARIHLKPVILLFLPQVAISLYVTLDRTMLGALSSTNDVGIYDQ ALKIINILLTLVTSLGSVMLPRVSGLLSSGDYKAVNKMHELSFLIYNLVIFPIIAGLLIV NKDFVSFFLGKDFQEAYLAIAIMVFRMFFIGWTNIMGIQILIPHNKHREFMLSTTIPAVV SVGLNLLLIPPFGFVGASIVSVLTEALVWVIQLKFSRGFMKDVSILPAMSKIILASVVMY LGLFVFKMFVQFKPMANVAVDGFVGAIIYVILIFVLRVVDMKDLKQQLMKN >gi|311101497|gb|AEKO01000005.1| GENE 179 171160 - 172260 1392 366 aa, chain + ## HITS:1 COG:glf KEGG:ns NR:ns ## COG: glf COG0562 # Protein_GI_number: 16129976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Escherichia coli K12 # 1 361 1 361 367 458 62.0 1e-129 MYDYLIVGAGLSGAIFAYEATKRGKKVKVIDKRDHIGGNIYCEEVEGINVHKYGAHIFHT SNKKVWDYVNQFAEFNNYINSPVANYKGSLYNLPFNMNTFYAMWGTKTPQEVKDKIAEQT ADMKDVDPKNLEEQAIKLIGPDIYEKLIKGYTEKQWGRSATDLPPFIIKRLPVRLTFDNN YFNDRYQGIPIGGYNVIIENMLGDVEVELGVDFFANREELEASAEKVVFTGMIDQYFDYK HGELEYRSLRFEHEILDEENHQGNAVVNYTERKIPYTRIIEHKHFEYGTQPKTVITREYP ADWKRGDEPYYPINDEKNNAMFAKYQEEAEKNDKVIFCGRLADYKYYDMHVVIERALEVV EKEFTK >gi|311101497|gb|AEKO01000005.1| GENE 180 172257 - 173249 532 330 aa, chain + ## HITS:1 COG:no KEGG:Shel_12340 NR:ns ## KEGG: Shel_12340 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 6 329 8 336 337 242 38.0 1e-62 MTQEKIDIVVPWVDGSDPEFIREKQAVTGHFADLGEEIDGEQRYRDYGIFNYWFRMIEKH APWVNNVYLITNGQKPDWLNLEHPKLKFVTHREFVPKEYLPTYNSAAIELNLHRIEGLSE NYLYFNDDMYLIRDSQPSDFYKNGQPKLLAVYDALVPWSPFTNTYHNNVELIYRHFPNKK ALKSSPWKFFNYRYGHLVIKNLLLLPWGPTGYVNQHLPVPMKKSTLAHLWEIEAETLDKT SRNKIRDYGVDVNQYICQHWQIESNQFYPVSKNFGESIGVNQVDRLESIFKDKHKKLLCV NDDVDFKEENIIRFKEILKERYPEKSAFEK >gi|311101497|gb|AEKO01000005.1| GENE 181 173260 - 174312 690 350 aa, chain + ## HITS:1 COG:no KEGG:LAR_1288 NR:ns ## KEGG: LAR_1288 # Name: not_defined # Def: hypothetical protein # Organism: L.reuteri_K # Pathway: not_defined # 7 350 9 334 338 199 36.0 1e-49 MKYYLKEEFLHDNNVKNAGNKARNDVEEIVKREGYQALVLSVDNWYNMSIIKAQIHKAKS FSQSLNRLNKGDELLIQFPMLHHSFFTTLLVKKARKRGVKIQFIIHDLDALRFMNSQAAR LKHRIRMRIQESGLLGVADGIIAHNPIMKSVLVDKGVDADKIISLGIFDYLIPNFQDKTG LTKNQPIIVAGNLAQEKAGYLYSIPEEPAYNLYGVGFDESRALTNETYFGSFLPDELPSA LEGGFGLVWDGDSAETCSGVFGEYLRYNNSHKASLYLASGFPLVVWKQSALSHFVLENGC GIAVESLHDLKTTIDNLSDTNYQDLVENAKCVGKGIRDGHYLITALNNLK >gi|311101497|gb|AEKO01000005.1| GENE 182 174345 - 175340 960 331 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477412|ref|ZP_04062048.1| ## NR: gi|228477412|ref|ZP_04062048.1| hypothetical protein STRSA0001_1875 [Streptococcus salivarius SK126] # 1 331 9 339 339 584 89.0 1e-165 MLFYLLMIGAIVGGLLYLTIYFNNRDIKKLSMPSDKDGLTFNIENKELLDQSVLLEKGSI KNVDMQILSFKKDGKYVLQKGRTEDNNPELTEQSIKYEANRREALALINSGFWSYEGLDR PFAQKEIKLGKTGLLYGDDQNNITAGTYPNIDTAQMFTHMGSNGWDTGAFGIIVKDKKLD KNWEKGDPDQPNARSIYVETYDGIIRIIQTYGHTSLNKGLNHEDIYNLLKNLGYSNIRLA FLLDGGGTTRMYTRSDNGKEKVVGAFVDDRTYIEYLYLAKRDSNATDPYIWRDQELVKAG KSKSITYKDYIEAIFSNGTVPGTQYQFEISK >gi|311101497|gb|AEKO01000005.1| GENE 183 175509 - 175598 61 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIKVIASDRDGTFLEDKGSYDKERFNHI >gi|311101497|gb|AEKO01000005.1| GENE 184 175605 - 176102 477 165 aa, chain + ## HITS:1 COG:lin0440 KEGG:ns NR:ns ## COG: lin0440 COG0561 # Protein_GI_number: 16799517 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 163 32 191 270 64 28.0 1e-10 MAARDMHFVVASANSMSSLKPMFAETFDRLHFVAENGGQVVSYGQLLCQEFMASNDVENL LSYFNYNLLDRPTIFNGAQGYYMLKGSRVNFEKITEEEQKALEAAIQRLNGLEELDDDFI KITMLLSPEEANRVSEAFNRDFDGNLVDVPSGFDAIDFIQKGVHT >gi|311101497|gb|AEKO01000005.1| GENE 185 176129 - 176311 207 60 aa, chain + ## HITS:1 COG:lin0440 KEGG:ns NR:ns ## COG: lin0440 COG0561 # Protein_GI_number: 16799517 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 53 212 264 270 70 52.0 7e-13 MAFGDGDNDIELLRMSSHSYAMENASPALLQVADQIAPHHKDQGVLTILEDYLGYRKKGW >gi|311101497|gb|AEKO01000005.1| GENE 186 176331 - 176918 436 195 aa, chain + ## HITS:1 COG:SAS020 KEGG:ns NR:ns ## COG: SAS020 COG0406 # Protein_GI_number: 15926477 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Staphylococcus aureus N315 # 1 187 8 191 193 140 40.0 2e-33 MRHGETLFNTQKRVQGWCDSPLTENGICQAEQAKQYFAKKGISFDAVYSSTQERATDTAK IVAPEYTVTQLKGIKEMNFGSFEAQPEHLLPKHRPGLRSFEDLLVPYGGEDIRKVGQRVL KTVIEKAEKHIKEGAENLLFVSHGAALWGLIIFMDLAFPEGVGFGNCNVCVYDYNQGQLE LLQVIDPISGLEVTL >gi|311101497|gb|AEKO01000005.1| GENE 187 176915 - 177523 478 202 aa, chain + ## HITS:1 COG:lin1208 KEGG:ns NR:ns ## COG: lin1208 COG0406 # Protein_GI_number: 16800277 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 2 190 3 186 199 169 48.0 4e-42 MKEFYLMRHGQTRFNVQHRLQGVCDAPLTEVGIEQAKKAGQYLAKQETIFDHVFTSTSER ASDTLEIVTGRTDYERLKGLRGQDFGSFEGQPEYLTPKALPDGQGFGDFFVQFGGESTTQ VRDRMELTVRAIMESVAEGSKSLLVSHGPSILQFCRRVLDPAPDMHGLKNCSILHFTYDQ GQFELVSIYNPVEEEYIYGGEE >gi|311101497|gb|AEKO01000005.1| GENE 188 177520 - 178116 314 198 aa, chain + ## HITS:1 COG:lin1208 KEGG:ns NR:ns ## COG: lin1208 COG0406 # Protein_GI_number: 16800277 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 4 188 5 186 199 155 43.0 5e-38 MTRFYLMRHGQTLFNTLNRIQGWCDSPLTEIGRDQARQVRAYFEKHDMTFDQYYCTTTER ASDTVELATGRTDYHRIKGLKEMHFGIFEGQPEYLHPKTQIQGHFGDHYAKFGGESQAQF VERVVNGAREIVDKHPGQSILAVSHAGALMTFLHAVEPERAFQSCPGNCAILVFDYDGSD FHFVKLIDPLTDQEFMEF >gi|311101497|gb|AEKO01000005.1| GENE 189 178195 - 179331 869 378 aa, chain + ## HITS:1 COG:SPy1117 KEGG:ns NR:ns ## COG: SPy1117 COG0628 # Protein_GI_number: 15675097 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 1 366 8 374 382 305 50.0 8e-83 MKFTKNQFIWMAVLFFSCFLIYTYWETVVSICNTIFVASQPFLVGAGIAFVVNILMSFYE KILVKFIPFGFITKIKRPVSLLLAFATIGLVFTWVVFTVLPDLIDSINTLISQDRSAINN LINWLLKNKSLQKVIQDLGGVTQVRELINSYSAQLLQQIMTGLTNFLTSLTSLPSTLINL FISVVFSCYVLAGKEKLGNQVNRLVDVYLGRYGKTFHYVVGILNNRFRNFFVYQSIEACI LGTLCYIGMRIFNFPYAATISILIGFSAMIPVVGAYIGVTIGTILIMTHSVTLALLFVAY VVILQQFEGNLIYPYVVGGSTGLPGIWVIFAITIGSALAGILGMLVSVPVAATLYQIVKD NVVTREEAKAVASLENSD >gi|311101497|gb|AEKO01000005.1| GENE 190 179727 - 179921 118 64 aa, chain + ## HITS:1 COG:SPy0574 KEGG:ns NR:ns ## COG: SPy0574 COG2723 # Protein_GI_number: 15674663 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 5 64 89 148 474 99 73.0 2e-21 MVSYFPNGDDAEPNEAGLAFYDKVFDELAKYGIEPLVTLSHYETPLNLAREYNGWTNRKI NWFL >gi|311101497|gb|AEKO01000005.1| GENE 191 179884 - 180270 456 128 aa, chain + ## HITS:1 COG:SPy0574 KEGG:ns NR:ns ## COG: SPy0574 COG2723 # Protein_GI_number: 15674663 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 7 128 143 274 474 184 67.0 4e-47 MDGLIVKLIGFYENYDRTVFTRYKDKVKYWLTFNEVNSVLHAPFMSGSIATPMEELSKQD LYQAVHHELVASASATKIGCMVLAMPAYGMTANPLDQLAVHEFENQNYLFSDIHARGKYP NYIKRYFK >gi|311101497|gb|AEKO01000005.1| GENE 192 180352 - 180843 605 163 aa, chain + ## HITS:1 COG:SPy0574 KEGG:ns NR:ns ## COG: SPy0574 COG2723 # Protein_GI_number: 15674663 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pyogenes M1 GAS # 1 161 304 469 474 229 67.0 2e-60 MSVATAHNPEDYTIGKGNIMGGVENSYLEKSEWGWAIDPIGLRLVLNDFYERYQLPLFIV ENGLAAKDVLVDGPDGSTVEDDYLQKHLMQVSEALQDGVELWGYTTWGPIDLVSASTAEF SKRYGFIYVDRNDDDSGSLARYNKKSFAWYKSVIESNGEALYK >gi|311101497|gb|AEKO01000005.1| GENE 193 181091 - 181369 457 92 aa, chain + ## HITS:1 COG:no KEGG:str1063 NR:ns ## KEGG: str1063 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 92 3 94 94 110 91.0 2e-23 MNDLKKVLLAGIGLTAMTVDKADSFVKELVEKGRLTVEEGKELEQELKRQSKEEAQEFLN KLDAKKSSVEYATKEDVKRLEEKLDALLSHNK >gi|311101497|gb|AEKO01000005.1| GENE 194 181387 - 182964 1238 525 aa, chain + ## HITS:1 COG:CAC0033 KEGG:ns NR:ns ## COG: CAC0033 COG0661 # Protein_GI_number: 15893331 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Clostridium acetobutylicum # 4 478 6 479 532 306 34.0 5e-83 MASKRLRHVLKVFSSVGLLSYREKHLPQDQQTTPVKLRQAFEQLGPSFVKIGQILSTRSD LLPENYIKELSKLQSSVPPLNKEEVMTAIKRELPNGLSDSFLDFSEEPLASGSVAQTHRA RLLSGQEVIIKIQRPGIDEVVKEDIQLLIKLARHIPKHFIPMVDVQEVLENLRETLIKEL DFRNEAEAMKRFRAYNMQVACLGVPEVYDEFTTPHLIVEEYIDGIPLNDYSQLIEAGYDL EDVGKKLMLSFIKQVFKDGYFHGDPHPGNLLVRDGKICFIDFGIMGELEAGMRASLNDIL YSFTAQDVDGMTKAILSVTQFDNGLNRAVLSQDVEQMLGRYSGVDLGSLSMTDLLEDLLA IFQKNHLKASSQITILEKSSLQIEGIFRELAPNMDLMTLAKDYFLENMGPDMLKQTLNKE TILIELFYLLRNGKNIPRRLHQLLEQILNGRIVLNHDFIDFSGRVKVFEKVLNNLVLALL TLAFLLSGALLSNKSDFQNLAWLFLGIGTFLALVTVGRIIFKKKG >gi|311101497|gb|AEKO01000005.1| GENE 195 182968 - 183588 516 206 aa, chain + ## HITS:1 COG:SPy1115 KEGG:ns NR:ns ## COG: SPy1115 COG2755 # Protein_GI_number: 15675096 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Streptococcus pyogenes M1 GAS # 1 200 1 200 204 180 46.0 2e-45 MMETTRPELVAYQKERLAKFVSENQKLDKGQIVFAGDSITEFFALKKYLGREFPLVNRGI AGTDSVWLLEHLKEQVLDLEPSKLVILIGINDIGRGYPIQDVVNRISDIIMTVRQESLYT EIYLLSVFPVSERLEHASKVKIRNNATVGELNQQLAVLPGVTYVDLFDYLTDAQGQLNAN YTTDGLHLSPQAYQVIAEPIIKEILE >gi|311101497|gb|AEKO01000005.1| GENE 196 183585 - 184436 879 283 aa, chain + ## HITS:1 COG:PM0638 KEGG:ns NR:ns ## COG: PM0638 COG4667 # Protein_GI_number: 15602503 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pasteurella multocida # 1 280 1 278 280 302 51.0 6e-82 MKVGLVLEGGGMRGLYTAGVLDAFLEAGIKVDGVVSVSAGALFGVNYLSNQPKRALRYNK RFMGDRRYMSFWSWLTTGNFVNKEFSYYKVPMELDVFDQEAFAESGVPFYVVTTDIETGK PDYIKIDHVFEQMEALRASSALPLVSEIVEYKGKRYMDGGLSDSLPIDFMENMGFDKFVV VLTRPKSYRKQPSKTSKRIYKLFYRKYPEFVEVPSNRHIHYNKSIEKIETLEKTGKVYAI RPEHALEVGRLEKDPEKFEAIYQEGLEQIRNDMSNLKIFLGDN >gi|311101497|gb|AEKO01000005.1| GENE 197 184628 - 185092 390 154 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 149 5 147 157 192 60.0 2e-49 MAQKAHSLSHTKWMCKYHIVFTPKYRRKIIYNQYRSSLGEIFHRLCQYKGVEIIEGHLMP DHVHMLVSIPPRMSVASFMGYLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQEQEKHDIALDKLSVKEYENPFRDNGK >gi|311101497|gb|AEKO01000005.1| GENE 198 185301 - 185543 68 80 aa, chain - ## HITS:1 COG:no KEGG:SGO_1585 NR:ns ## KEGG: SGO_1585 # Name: not_defined # Def: D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4) # Organism: S.gordonii # Pathway: not_defined # 1 78 1 77 460 80 52.0 1e-14 MKKKLLGLLLVASLTISPSLSFADQLVDIAQKAGYKEATETYRPKSSLLIDANTGDILWQ DNIDEVRDPASSCCQFTLST >gi|311101497|gb|AEKO01000005.1| GENE 199 185696 - 187042 1708 448 aa, chain - ## HITS:1 COG:SA0598 KEGG:ns NR:ns ## COG: SA0598 COG1686 # Protein_GI_number: 15926319 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Staphylococcus aureus N315 # 34 364 39 364 431 225 39.0 2e-58 MKKKIVSILLSACLALAPSLSSADELMDITRAAGYTEATEAYRPKSTLLIDGTTGDVLWE ENADEIRDPASMSKAMTLYLVFEAMSKGEISEDTVITATPTDQAIADIYEISNNKIVAGV DYTVSELITMTAVPSSNVTTVMLANYLTNNNPDKWLDMMNEKSKELGMTNTKWFNASGAV AVAFKGYYSPQRYDNNQTNQTTARDLAIMTYNFIKKYPKILKYTSKPVVTVKKGTPYEET FETYNYSIPGAKYGIDGVDGLKTGSSPEGAFNYIDTIKRGNQRMIAVIMGSGDWSDQTGE EIRHTFGNALVEKMYKDFSYKKVLSKGEQEIDGKKYNVEKDVYATVKKGKDPKISVKDDQ IVIDNGLKTVSPNIKATSVKATKVKGWFDFGSKQKDKKATKATNNGQLPVYFWLLCLVPI GLLYLIYLNEKGRLQKVKERRLAREQHK >gi|311101497|gb|AEKO01000005.1| GENE 200 187282 - 188478 687 398 aa, chain - ## HITS:1 COG:SPy1272 KEGG:ns NR:ns ## COG: SPy1272 COG0053 # Protein_GI_number: 15675227 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Streptococcus pyogenes M1 GAS # 6 398 8 400 411 530 66.0 1e-150 MTTYENLRAARRGPIVSIAAYLLLTIAKLIAGHFLNSSSLIADGFNNLSDILGNVALLIG LHLASQPADADHRFGHWKIEDLSSLVTSFIMFVVGFQVLIQTVRKIFLREETVVDPLGAT VGVLSALVMCGVYLYNKRLAKKLKSSALIAAAKDNLSDAVTSIGTSIAILAASFNLTIID YITAIIITFFILKTAYGIFMEATFSLSDGFDERNLKAYEKAILEIPKVTKVKKQRGRSYG SNIYLDIVVEMNPDLSVYESHAITEQIEEILSKRFSVYDTDVHVEPAAIPEDEIYGNVLR KLTRNEKIILSKIPDYENLLAPDFYLIDENGHHHTREKVIANHQPLLNNFDSFKMTSVSQ KTKLISYELGGNFHTSIWRRNETWFMIYHQVTAIKDNE >gi|311101497|gb|AEKO01000005.1| GENE 201 188767 - 189345 477 192 aa, chain + ## HITS:1 COG:SP1169 KEGG:ns NR:ns ## COG: SP1169 COG0692 # Protein_GI_number: 15901034 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Streptococcus pneumoniae TIGR4 # 1 192 26 217 217 310 78.0 9e-85 MDQVYSQGTVYPPRDKVFNALLETPFEEVRVVILGQDPYHGPNQAQGLSFSVPETIPAPP SLVNILKELGEDLGPRSHHDLTTWAEQGVLLLNACLTVPAGQANGHAGQIWEPFTDAVIK VLNQKDTPVVFILWGGYARKKKVLVTNSKHAIIESAHPSPLSAYRGFFGSKPFSKANAYL VSQGQSPIDWLK >gi|311101497|gb|AEKO01000005.1| GENE 202 189365 - 190633 1495 422 aa, chain + ## HITS:1 COG:SP1167 KEGG:ns NR:ns ## COG: SP1167 COG0044 # Protein_GI_number: 15901032 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Streptococcus pneumoniae TIGR4 # 1 422 1 422 422 615 79.0 1e-176 MLLIKNGRVVDPKSGLDTQADVLVDGKKVVKIAENIDAGDAQVIDATGLVVAPGLVDIHV HFREPGQTHKEDIHTGALAAAAGGFTTVVMMANTNPTISDKETLKDVLTSAAKENIHVKS VATITKNFDGENLTDFKGLLEAGAVGFSDDGIPLTNAGIVKKAMELAKENNTFISLHEED PDLNGILGFNENIAKKEFHICGATGVAEYSMIARDVMIAYDTQAHVHIQHLSKAESVKVV EFAQKLGAQVTAEVAPQHFSKTEDLLLSKGANAKMNPPLRLESDRRAVIEGLKSGVISVI ATDHAPHHADEKNVSDVTKALSGMTGLETSLSLGLTNLVEAGHLSLTELLKVMTSNPSDL YGFDAGYLAENGPADLVIFADKEKRQVTADFKSKAANSPFVGEELTGSVKYTICDGEIVY QA >gi|311101497|gb|AEKO01000005.1| GENE 203 190707 - 192632 1013 641 aa, chain + ## HITS:1 COG:no KEGG:SGO_1726 NR:ns ## KEGG: SGO_1726 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 607 1 605 639 397 38.0 1e-109 MKKILLFLIVILTILLPTTTVHAKEVRYDIASYKGHLIINDDGNGSFTQEVLYVFKSDYN GQYVTLGYADPVPKGFMISENPSVSATVNGQEKKDIQVEETNLSDGIKLKVYNSGSDGDK VQLKVTWQIQNMLSLYSDIAVLNWFPISDWDESINHVDFEVEGLDASQGELYAHTGYFGK TPDVERTSNGYRVRVENLPSGGKLELHAYWPMTSALKDGHLSYISDEKYRGKFIEKEESI SKTMATYQNVFYKILPKVMVGFFILGSFFFWKVLRWTKEPSFPYDVRIYETPQDLPPLVL AKSIYNQSFDKTGLGEENGHLKFKNMVQAVILDLVDRGYIAYSQENGVHTLRRIPKEGLA DYEFDFLEMLFDDRIEITDREMFSRYYLDEKGLRKQFNNAKSNYERNSVREEGQRIRRKF VQDGRSVTEGVNREIVSLGLPNLYRDFTIKENMFITSGNVVFTLLFIISTLATIFLFVGL GSGLGVIYILVSLFVALVWYSNRRFIKKRRKKTLDPSHIEEYRHWQYFESMLRSITSFRQ SELESVILWNRILVYATLYGQANKVSDVLKRYNIHLSNPSLDEFTHSATPFLLLNNVSRL ESYVSTSNTVSNFSINSNSGSGGLGGGGFSGGGGGGGGGAF >gi|311101497|gb|AEKO01000005.1| GENE 204 193090 - 193380 324 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477378|ref|ZP_04062014.1| ## NR: gi|228477378|ref|ZP_04062014.1| putative membrane protein [Streptococcus salivarius SK126] # 1 95 239 333 429 148 80.0 9e-35 MTNYNKSFIQIITQKQESFNLFKKNLKGVSLALEDKDTAKATGLLEIYKTGDSIMGNPET QEMLDQINNPILASFLSNRILEMQAAHIDIAMNISS >gi|311101497|gb|AEKO01000005.1| GENE 205 193729 - 194700 1232 323 aa, chain + ## HITS:1 COG:SPy1026 KEGG:ns NR:ns ## COG: SPy1026 COG1071 # Protein_GI_number: 15675025 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 323 1 322 322 576 90.0 1e-164 MVKLSKETHLEMFTKMERIREFDSRINKLVRRGFVQGMTHFSVGEEAANVGAVQHLSYDD IFFSNHRGHGQSIAQDMDLNKMMAELAGKATGVSKGRGGSMHLADFEKGNYGTNGIVGGG YALAVGAALTQQYKETGNIVVAFSGDGATNEGSFHESVNMAATWKLPVIFFIINNRYGIS MDIHKATNTPHLYTRAEAYGIPGFYCEDGNDVMAVYDTMGKAVDHVRGGNGPAIVEVESY RWFGHSTADAGVYRTKEEVDEWKNNNDPIIKYRDYLVSENIASAEELDAIQSQVKTEVDS AYEFAQNSPDPELSVAFEDVWVD >gi|311101497|gb|AEKO01000005.1| GENE 206 194725 - 195723 1301 332 aa, chain + ## HITS:1 COG:SPy1028 KEGG:ns NR:ns ## COG: SPy1028 COG0022 # Protein_GI_number: 15675026 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 332 1 332 332 572 91.0 1e-163 MSETKLMALREAVNLAMSEEMRKDENIFLMGEDVGIYGGDFGTSVGMLAEFGEKRVKDTP ISEAAIAGAAVGSAITGLRPIVDLTFMDFITIALDAIVNNGAKNNYMFGGGLKTPVTFRV ASGSGIGSAAQHSQSLESWLTHIPGIKVVAPGNANDAKGLLKSAIQDNNIVIFMEPKALY GKKEEVTQDPDFYIPLGKGEIKREGTDLTIVTYGRMLERVLKAAEEVTEQGINVEVVDPR TLVPLDKELIFESVKKTGKLMLVNDAYKTGGFIGEIAAMVTESEAFDYLDHPIVRLASED VPVPYARVLEQAVLPDVEKIKAAIIKMANKGN >gi|311101497|gb|AEKO01000005.1| GENE 207 195971 - 197341 1544 456 aa, chain + ## HITS:1 COG:SPy1029 KEGG:ns NR:ns ## COG: SPy1029 COG0508 # Protein_GI_number: 15675027 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 456 7 469 469 604 75.0 1e-172 MPKLGVDMQEGEIIEWKKQEGDVVNEGDILLEIMSDKTNMELEAEDSGVLLKITRQAGET VPVTEVIGYIGAEGEVVADNAASAPAAEAALQVEEVATVEATVVAAKTKAPVVHEGGRVR ATPKARKVARELGIDIAQVQGTGAKGRVHADDVENFKGAQPKATPLARKIAADLGIDLAS VSGTGFGGKITKEDILAISAPAQVKEAAAARVVEAKPEKVLPEGVEVIPMSAMRKAISKG MTHSYLTAPTFTLNYDVDMTNLMALRKQVLDPIMNKTGMKVTFTDLIGLAVVRTLMKEEH RYLNASLIDDAQNIELHKFVNLGIAVGLDDGLIVPVVHGADKMSLSDFVVASKDVIKKAQ AGKLKAAEMSGSTFSITNLGMFGTKSFNPIINQPNSAILGVSATIQTPVVVDGEVVVRPI MGLCLTIDHRIVDGMNGAKFMVDLKHLIENPMELLI >gi|311101497|gb|AEKO01000005.1| GENE 208 197520 - 199268 806 582 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 124 576 2 457 458 315 38 2e-84 MAFEIIMPKLGVDMQEGEIIEWKKQEGDVVNEGDILLEIMSDKTNMELEAEDSGVLLKIT RQAGETVPVTEVIGYIGAEGEVVADSAASAPVAEVTAQLESAGLEVPKAPAPAAAAEKAP LADNEYDIIVVGGGPAGYYSAIRGAQLGGKVAIIEKSEFGGTCLNKGCIPTKTYLKNAEI LDGLKIAAGRGINLASTNYTIDMDKTVDFKNSVVKTLTGGVQGLLKANKVTIFNGLGQVN PDKTVTIGSETIKGRNIILATGSKVSRINIPGIDSQLVMTSDDILDLRELPKSLAVMGGG VVGIELGLVYASYGVEVTVVEMADRIIPAMDKEVSLELQKILAKKGMKIMTSVGVSEIVE ANNQLTLKLNNGEEIVADRALLSIGRVPQLDGLENLNLELDRGRIKVNAYQETSIPGIYA PGDVNGTKMLAHAAYRMGEVAAENAMHGNVRKAHLDYTPAAVYTHPEVAMCGLTEEDARA KYGDVLIGKSSFAGNGRAIASNEAQGFVKVVADAKYHEILGVHIIGPAAAELINEASTIM ENELTVDELLQSIHGHPTFSENMYEAFADVLGEAIHNPPKRK >gi|311101497|gb|AEKO01000005.1| GENE 209 199531 - 203058 3367 1175 aa, chain + ## HITS:1 COG:no KEGG:SGO_2013 NR:ns ## KEGG: SGO_2013 # Name: not_defined # Def: putative N-acetylmuramidase/lysin # Organism: S.gordonii # Pathway: not_defined # 1 1023 1 1016 1160 1014 54.0 0 MRTKDFIYYASAAVLLAVTTQVAQADEVATQAPSIAEGNHYQPETVADILGGEASLIETP SSTVSAPASTATAKQNSEASSVAAVTSIASTYVANSTTTVTSTSVATSNVSSESVTASAH STASEASNKAVAKPAKLTNSSDVSSTTLRVQPKTFIDVSSHNGDISVDDYRALARQGVGG VVVKLTEDTWYNNPKAPSQVRNAQIAGLQVSTYHFSRYTTEEEARAEARFYIEAAQRLNL PKSTVMVNDFEDSNMLPNINRNTQAWVNEMRKHGYNNLMFYTSASWLDENNLGYRGPVST SQFGIENFWVAQYPSATLTATSAKNMRYNGKTGAWQFSATANLLPGKHVFDQSVDYTGRF TANVGIETDPTQGDLSGVISIVNNNPILGSFDVVISNVKAPNGVGTVSVPIWSEINGQDD IIWYTADRQNNGTYTVNVKASAHKNSTGLYNVHLYYVQKDGQLTGVGGTTTQVFIGKTPE QLKPKASFAIENNNVNAGTFDAVITNISAPLGVKEVLVPSWSLDGGQDDLIWHKATKQSD GSYRVTIKASEHKGNKGNYRADAYIVDNSNNRHYISEKVVSVDYARPSGVLTIENNNTAT GTFDAVVRNIVAPTGLKEVLVPSWSLDGGQDDLIWHKATRQADGSYRVTIKATDHKNSTG KYRADAYIVDDSNKRFYLTEKVVEVTQTRPRASLVIENNNADLGTFDAVIRNIVAPNGVM EVLVPSWSLVNGQDDLVWHKASRQSDGSYRVTIKASEHKNSLGNYRADLYIVDNANQRHY ITETIVDVKHNKPVGTISVVNNNKDTGTFDVVISDVYSSKGVRTVQVPIWSEKDGQDDIR WYEATRQANGTYTVNVQATNHKNSTGLYNIHLYYILNDGSQVGVGGTTTTVEFRNAKTKT QTYITNVNSEAGSFTVVVDQAPQGRQIKNIHVAVWSESNQGNLSWYNTAPTGTHTEINVS TVNHKNLIGNYTTHVYVDYVDNTEDGFNLGETALAPRNRRVEPQTTYYSQRDPRWASKWY GVSNMDQSGCVPTSLAMTFTDILGTVIAPTTVADYLYYNTNSFNKTSVAGTDADGIVLAS KNWGLKSNVLSSIDNIASALMSGQHVLAAVGASQFTNYPYTHEIVLHGYDNGKTYVRDPF NANNNGWYSLDYIHGVQSRDAMDTKLGAPFFSVFA >gi|311101497|gb|AEKO01000005.1| GENE 210 203252 - 203932 373 226 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 2 222 119 343 422 242 56.0 4e-64 MALTDIARRLRVSTSTVYRKFDQFSFKEHFDKLPRVMSWDEFGFKKGELAFVAQNYETNE LITILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAEIIIDRFHII QHLGRAFLKTRIAIMNQFDKNSLPYQALKNHWRLFQKDSRKLSCKSFHSKTFGQTLSPHE LVEKTLNFSEELTDYYTLYQLLLCHFQEKRVDEFFELYDYSLAQNR >gi|311101497|gb|AEKO01000005.1| GENE 211 204058 - 204282 129 74 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 63 1 63 422 68 57.0 3e-12 MRLIKNTTELIGIKDQNIIISLVFETDTHIEFQAKLDYPAPSCPHCQGKMIKYDFQKTLK FLFSNKQERRHYYV >gi|311101497|gb|AEKO01000005.1| GENE 212 204581 - 205072 350 163 aa, chain + ## HITS:1 COG:SA0331 KEGG:ns NR:ns ## COG: SA0331 COG2822 # Protein_GI_number: 15926044 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Staphylococcus aureus N315 # 53 127 38 112 284 71 45.0 6e-13 MSNTILKIGDIHEKLNKLGVVLLASGLLLTACAKSGNSSNSSSTNSKLTASEQKQLKQAT SDYKTFVEGEIDQLLKDTEGFSATLKSGNLEEAKKQYPLIRMAYERSEPIAESFGESDVK IDYRLVDYMDEKNLKTVGQVSTVLNVSCGKTTRQREQLPMWIN >gi|311101497|gb|AEKO01000005.1| GENE 213 205021 - 205485 609 154 aa, chain + ## HITS:1 COG:SA0331 KEGG:ns NR:ns ## COG: SA0331 COG2822 # Protein_GI_number: 15926044 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted periplasmic lipoprotein involved in iron transport # Organism: Staphylococcus aureus N315 # 16 152 148 284 284 143 57.0 1e-34 MWQDNTTEGTAAYVDQLINDIKELKAKIATVKVTPDIMLTGAVDLLNEVATQKITGEEEV FSHTDLYDFRANIEGAEKIFELFKPLIEKKDAKLVKTLETEFKNVNGLLDKHMIDEKNYK SYTDLSEVDTKELAEAVTKLGEPLSQMGVILDGK >gi|311101497|gb|AEKO01000005.1| GENE 214 205491 - 206696 1131 401 aa, chain + ## HITS:1 COG:SA0332 KEGG:ns NR:ns ## COG: SA0332 COG2837 # Protein_GI_number: 15926045 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Staphylococcus aureus N315 # 57 401 21 371 371 365 50.0 1e-100 MTDEKFLDKKMDRREFLKKAGIGGAGLALGLSGASAFFANQDSSTKKALDGDEDISFFGK HQAGITTPMQKACYLVVLDLRTTDKKEVIQLFKDWTDYSSKLVEGELVKKDGSNALLPPT DTGETVGLNPYRLSLTFGVSADFLKKLGLESKRPKLFRDLPPFPKEQLQDKYTGGDIVIQ ACADDEQVAFHAVRNLIRKGRNKITMKWSKSGFAAIGDRKETPRNLFGFKDGTANVTTEK EFDKVVWTDSKDWMKGGSYMALRLVQMHLETWDRTNLQEQENTFGRYKESGAPFGKKDEF DEVDLSKLPVDSHVRLAKEVNLPILRRSYSYSDGIDERTGQFDSGLIFIAYQKDPDRFVK IQTNLGAVDKMNEYITHIGSGLFACFAGVEKGGYLGQALFE >gi|311101497|gb|AEKO01000005.1| GENE 215 206674 - 208359 1677 561 aa, chain + ## HITS:1 COG:SA0333 KEGG:ns NR:ns ## COG: SA0333 COG0672 # Protein_GI_number: 15926046 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Staphylococcus aureus N315 # 1 556 1 568 571 288 32.0 2e-77 MVKHSLNKLLVLLGLLALFCTYPVAAESYSDLFIKITDTTTAVQNKDQTKANELVSEIKS DFETKENHDSKAGRKVSKALDIKGDVTEEDLTAISSALLKFEKEQNPVDLDAEKEKLETR LNPYFKNLQDAINAKDLTVTRKTYSELNNAWTRNEAVVRDHSTAYYGKIETAISLLRSSI ETEPTDFTSIQSSYDDLKGGIDDFIKGVPLDSTSTSLTLKDGIKLLKKALGQFQSGDEKT AAATMKKFITIWPTIEGDVSTTNPSLYTRVESETPVIMVKGKEKAYQDKLQALITDLSAI DTSASYNAFDAMLILLREGVEALLIVMALVTTLKAAKMRKGLKWVYGGAVSGVLASAAIA VVLQVVFPAVTSGSNREIIEGGVGIFAVAMMILIGIWLHSKSSVKQWNDFMDRQMKTVTA TGSFVSMFALSFLAVFREGAETILFYVGIIPRITTANFLIGIGSAIAVLVIIAVAMTKAS HYIKPHRIFFILTWLIYALAFKMLGVSIHALQLTNMMSNHLISGLPTIDWVGIYPSWEVL IPQLIFIVIIAFVTVRQHGKK >gi|311101497|gb|AEKO01000005.1| GENE 216 208346 - 209074 456 242 aa, chain + ## HITS:1 COG:BS_ycbT KEGG:ns NR:ns ## COG: BS_ycbT COG0805 # Protein_GI_number: 16077333 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Bacillus subtilis # 5 238 3 239 245 179 40.0 5e-45 MARSKDEMTIVEHLVEFRRRFIAVVLCFFLVFCITLLFAGELYAYLTRGFDKPLLVLGPN DILWIYINLASLMAFTVTLPFTTYQIWQFVKPGLRDNEARAIFAYIPATFVCFVLGLAFG YYFVSPAILEVLLKLGEGHFNTQITAQNYLSFLLHTTVPLAVLFELPVVVSFLTSIGMIT PVFLTHYRRYAYFILLVLAVILTPADFISDLAMTAPLILLYEVSVTLSKLIYKRKQRKYK DK >gi|311101497|gb|AEKO01000005.1| GENE 217 209087 - 209275 338 62 aa, chain + ## HITS:1 COG:no KEGG:str1020 NR:ns ## KEGG: str1020 # Name: tatA # Def: sec-independent protein translocase protein TatA, putative # Organism: S.thermophilus_CNRZ # Pathway: Protein export [PATH:stc03060]; Bacterial secretion system [PATH:stc03070] # 1 62 1 62 62 99 91.0 5e-20 MGILRDIGAPGLIIIVLGALLIFGPKRLPELGQSIGKMLAEFKAAVNKTDEDKKDHETEK KD >gi|311101497|gb|AEKO01000005.1| GENE 218 209662 - 210798 1472 378 aa, chain - ## HITS:1 COG:SPy1976 KEGG:ns NR:ns ## COG: SPy1976 COG3839 # Protein_GI_number: 15675768 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Streptococcus pyogenes M1 GAS # 1 376 1 376 377 619 81.0 1e-177 MTTLKLDKIYKKYPNATHYSVEDFSIDIKDKEFIVFVGPSGCGKSTTLRMVAGLEEITEG TLSIDGEVVNDKSPKDRDIAMVFQNYALYPHMTVYENMAFGLKLRKYKKDDIDKRVREAA ASLGLTEFLDRKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVTMRAEIAK ITRNIGATTIYVTHDQTEAMTLADRIVIMSSTKNPDGSGTIGRIEQIGTPQELYNEPANK FVAGFIGSPAMNFFNVKVDGNRITNSEGLDIAISEGQAKILRETGYQGKEVIFGIRPEDV SSRPIVQEVYPDANVDAEVVVSELLGAETMLYLKLGETEFAARVDARDFHNPGEKVNLTF NVAKGHFFDAETEKRISL >gi|311101497|gb|AEKO01000005.1| GENE 219 210814 - 211650 836 278 aa, chain - ## HITS:1 COG:SPy1296 KEGG:ns NR:ns ## COG: SPy1296 COG3833 # Protein_GI_number: 15675249 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 278 1 278 278 367 74.0 1e-101 MKRKKNLYLTGTYILLTVLTVIWLIPIIWIFLTSFRGEGANAVPYFFPKTYTFNNYIKLF TSDAYPFGKWFINTFIVATCTCILSTLITVGMAYSLSRIKFKHRNGFLKLALVLNMFPGF MSMIAVYYILKALNLTQTLTSLVLVYSAGAALGFYIAKGFFDTIPYSLDESAMIDGATRL QIFTKITLPLSKPIIVYTALMAFMGPWVDFIFASVILGDVKDKYTVALGLYQMLNQDAIN EWFLPFTAGAIIIAIPITLLFIFMQKYYVEGVTGGSVK >gi|311101497|gb|AEKO01000005.1| GENE 220 211650 - 213008 1194 452 aa, chain - ## HITS:1 COG:SPy1295 KEGG:ns NR:ns ## COG: SPy1295 COG1175 # Protein_GI_number: 15675248 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 13 452 14 453 453 654 76.0 0 MSQTIYDTTPMRQVFKEGTWDVKLSFLVMGLANLVNKQFTKGLLFLLSEIAFLAAFVIQI IPALQGMISLGTQEQGEAVKEVNGVKLTVQVAGDNSMLLLIFGLASLIFCAVFVYIYWCN LKSARHLMALKQSGRKVPNFIEDFKTLADGRFHMGLMTVPLIGVLLFTILPLIYMVCLAF TNFDHNHPAPKSLFDWVGFASFGEVLQGRMAGTFFPLLTWTLIWAVAATATTFFFGIVLA LLLNTKGLKFKKVWRTLFVITIAVPQFVSLLLMRNFLNDHGPLNGLLQTLHLTNGPIPFL TDPLWAKFSIIFVNMWIGIPFTMLVATGIIMNLPTEQIEAAEIDGASKFQIFKSITFPQI LLIMAPSLIQQFIGNINNFNVIYFLTGGGPTNSEYYQAGSTDLLVTWLYKLTVSAKDYNL ASVIGILIFAISATFSLLAYTRSSSFKEGAAK >gi|311101497|gb|AEKO01000005.1| GENE 221 213124 - 214371 1567 415 aa, chain - ## HITS:1 COG:SPy1294 KEGG:ns NR:ns ## COG: SPy1294 COG2182 # Protein_GI_number: 15675247 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Streptococcus pyogenes M1 GAS # 1 415 1 415 415 515 68.0 1e-146 MKKWQKVLLGSAGLLVAGSLLVACSSNSSKSSSSDSKTLKLWVPTGAKKSYSNTVAEFEK KSGYKVDMVEMEDPNAQENLTKDASTAADVFSLPHDQLGKLVDAGAIQEIPEKYSKEITE QDTEQAAKGAQYKGKTYAFPYGIETQVTYYNKSKLNEEDVKSYETITSKAKFGSNLKEVN AYGTGPLFLSVGDTLFGPNGEDAKGTNWGNEAGVNVLKFIAAQKDNKGFVNVDSANMMAK FEDGSVDAFQSGPWDYAAAAKAVGKDKLGVAVYPTVNIGGQDVQQKAFMGVKLYAVNQTP SKGNAKRIAASYQLAQALTSKDSQNNQFTNEDRHIIPANKEVQASEAVKNDALAQAVITM GSSEQYTTVMPKLSQMSVFWTESAALMSDAYNGKIKEDQFLTKLQQFDKDLAAAK >gi|311101497|gb|AEKO01000005.1| GENE 222 214557 - 215558 951 333 aa, chain + ## HITS:1 COG:SPy1293 KEGG:ns NR:ns ## COG: SPy1293 COG1609 # Protein_GI_number: 15675246 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 330 1 334 339 342 50.0 8e-94 MATIKDVAKRAGVSPSTVSRTLKDNQAISEETKVKVRAAMDELGYVPNSAAQMLATGLTH SLGVVLPPLTDREKISQPFYMEILTAINEEASCHSQVISIATGATLEELVKQVELMHRQK RADGFIILYSEKKDPVKDYLLKEKVPFVVVGAAVDNNNKVTYIDNDNKELGQEAVSYLRT KGHQKVGFVTDDLFGQVGQERYQGYIEATNEFNLEAYPELVFSSRVIDSLTESLQSYQLT ALIVKDDLIALRLIHWLNNQGIRIPEDYAVISFNNSTFAEIMHPFLTTYDINIKELGKES VRRLLDLLKNPHTKAQKITIPFKLIERESVSTR >gi|311101497|gb|AEKO01000005.1| GENE 223 215811 - 217310 1752 499 aa, chain + ## HITS:1 COG:SPy1292 KEGG:ns NR:ns ## COG: SPy1292 COG1640 # Protein_GI_number: 15675245 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 497 1 496 497 668 61.0 0 MNKRASGVLMHITSLPGDYGIGSFGQAAYDFVDFLKETKQTYWQILPLTTTSYGDSPYQS FSAVAGNTHFIDLDFLIRDGFLTEADVEGVDFGSNPEFIDYAKVYEARRPILEKAVKAIL ADKKEAKKFEAFKSENVNWLADYADFMAIKEHFDNKALQDWDDKKAVKRDEATLEKLRKE LVDVITYHQVVQYLFFSQWAELKAYANKNGIQIIGDMPIYISADSVEVWTQPHLFKLDAE CKPRYIAGVPPDNFSATGQLWGNPIYAWDKHKAENYAWWVFRIQESFKLYDYLRIDHFKG FSDFWEIPGGDETAENGKWVPGPGYDLFKVVKEELGDLKIIAEDLGNIDDKTRKLLADCG YPGMKIVQFGFYDTTGNSIDIPHVYTQHSVAYTGTHDNEVINGWYDNLTQEQRDYTDAYI NRRQGEPITRALLRTLFATVSNTAIATMQDILDKPENSRTNFPNTVGENWKWRMLPGEIT VDKKEFLTDITERYNRGNK >gi|311101497|gb|AEKO01000005.1| GENE 224 217312 - 219573 2580 753 aa, chain + ## HITS:1 COG:SPy1291 KEGG:ns NR:ns ## COG: SPy1291 COG0058 # Protein_GI_number: 15675244 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 1 753 1 754 754 1221 82.0 0 MSTFTNYVEAKNKNLKELSNEEIYYLLLEFVKEAAAPKPKNDSKRKVYYISAEFLIGKLL SNNLINLGIYKDVKAELAAAGKSISEIEDVEPEPSLGNGGLGRLASCFIDSMSTLGINGE GVGLNYHCGLFKQVFKDNKQYAEPNYWIEDQSWLVPTDISYDVPFKNFTLKSRLDRLDIL GYKKETKNYLNLFDINGLDYGLIEKGITFDQDEIQKNLTLFLYPDDSTRKGELLRIYQQY FMVSNAAQLLIDEAIERGSNLHDLPDYAYVQINDTHPSMVIPELIRLLTEKHGFEFDEAV SIVSKMVGYTNHTILAEALEKWPLDYLEEVVPHLVVIIKKLDAIVREKFEDPRVQIIDEH NRVHMAHMDIHFSTSVNGVAALHTEILKASELKPFYDLYPERFNNKTNGITFRRWLEFSN QELADYIKELIGDGYLTDATQLEKLAAFADDPAVHKRLSQIKYDNKLALKRYLKANKGTD LDENSIIDTQIKRFHEYKRQQMNALYVIHKYLEIKKGNLPKRKITIIFGGKAAPAYVIAQ DIIHLILSLSELINNDPEVSKYLNVHLVENYNVTVAEHLIPATDISEQISLASKEASGTG NMKFMLNGALTLGTMDGANVEIAELVGPENIFTFGKDSDTIIDLYEKAGYVSRDYYEKDA NIKAAVDFIVSEDLVKLGDKERLERLHNELISKDWFMTLIDLAEYIEKKEEVYAAYEDQE AWNKKVVYNIAEAGFFSSDRTIEQYDKDIWHTK >gi|311101497|gb|AEKO01000005.1| GENE 225 219816 - 220319 150 167 aa, chain - ## HITS:1 COG:BH2524 KEGG:ns NR:ns ## COG: BH2524 COG2826 # Protein_GI_number: 15615087 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Bacillus halodurans # 16 148 103 236 314 155 59.0 3e-38 MSYSHLTIADRIKIETYQAIYNWLYAGLIDLDLSVLRRKGKSRQPKETRGRFRIGTQIAK CPKEVWNRETFGHWELDTVVSSRGKSKGCLATFLERKTRFYLAFKIPNRAAKAMFSAIKQ LCKLFPKEALKTFTSDRRKEFSCYPPVKNLGISFFCGRLSILAERKQ >gi|311101497|gb|AEKO01000005.1| GENE 226 220787 - 221776 1221 329 aa, chain + ## HITS:1 COG:SPy1033 KEGG:ns NR:ns ## COG: SPy1033 COG0095 # Protein_GI_number: 15675030 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Streptococcus pyogenes M1 GAS # 1 329 1 329 329 553 83.0 1e-157 MKYIVNTSNDPAYNIALEAYAFRELVNEDELFILWINRPAIIVGKHQNTIQEINKEYTDA HGIKVVRRLSGGGAVYHDLNNLNYTIISNKADEGAFDFKTFSQPVIATLADLGVKAEFTG RNDLEIDGKKFCGNAQAYYKGRMMHHGCLLFDVDMSVLGQALKVSKDKIESKGVKSVRAR VTNIVDELPEKITVNEFSDKILEKMKEFYPEMTEYVLSEYELTKIQDSYEKQFNTWDWTY GQSPEYTVERNVRYPAGKISTYANVENSIIKSVKIYGDFFGIGDVSDIEELLVGVPYEYE DVLAKLKTIDTTHYFSRMTTEEVAKAIAA >gi|311101497|gb|AEKO01000005.1| GENE 227 221780 - 221977 90 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLWGIFLLYGLFRFVGLFYKMTNLVNHKGTFRVSCEFDSGNYLKFTLDNIETHQKNNLEF SGLFK >gi|311101497|gb|AEKO01000005.1| GENE 228 222060 - 223130 1031 356 aa, chain + ## HITS:1 COG:SPy1196 KEGG:ns NR:ns ## COG: SPy1196 COG0582 # Protein_GI_number: 15675163 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 1 356 1 356 356 543 85.0 1e-154 MKRELLLEKIEEYKSLMPWFVLEYYQSKLSVPYSFTTLYEYLKEYKRFFDWLIDSDISDT DDIASIDIKTLENLTKKDMESFVLYLRERPSLNTYSKKQGVSQTTINRTLSALSSLYKYL TEEVEGPDGEPYFYRNVMKKVSTKKKKETLAARAENIKQKLFLGDETMDFLDYVENEYEV KLSNRAKSSFYKNKERDLAIIALLLASGVRLSEAVNLDLKDINLKMMVIDVTRKGGKRDS VNVASFARPYLENYLNIRDKRYKAEKQDLALFLTEYRGVPNRIDASSIEKMVAKYSQDFK IRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDNL >gi|311101497|gb|AEKO01000005.1| GENE 229 223292 - 225832 2583 846 aa, chain - ## HITS:1 COG:SPy1239 KEGG:ns NR:ns ## COG: SPy1239 COG0308 # Protein_GI_number: 15675199 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Streptococcus pyogenes M1 GAS # 4 846 3 845 845 1125 65.0 0 MTASVARFIESFIPENYNLFLDINRSEKTFTGNVAITGEAFDNHISLHQKDLTINSVLLD NESLNFQMDDANEAFHIELPETGVLTMFIEFSGHITDNMTGIYPSYYTYNGEKKEIISTQ FESHFAREAFPSVDEPEAKATFDLSLKFDAEEGDTALSNMPEINSHLREETGVWTFETTP RMSTYLLAFGFGALQGKTAKTQNGTEVGVFATVAQAENSVDFALDIAVRVIDFYEDYFQV KYPIPLSYHLALPDFSAGAMENWGLVTYREVYLLVDENSSAESRQQVALVVAHELAHQWF GNLVTMKWWDDLWLNESFANMMEYVSVDAIEPSWNIFEDFQTTGVPHALQRDATDGVQSV HMEVNHPDEINTLFDSAIVYAKGSRLMHMLRRWLGDEAFAKGLKAYFEKHQYNNTVGRDL WNALSDASGKDVSSFMDTWLEQPGYPVVSAEVVEDTLILSQKQFFIGEHEDKGRLWEIPL NTNWNGLPDTLSEELIEIPNYSQLATENNGALRLNTANTAHYITDYQGQLLDNILEDFVN LDTVSKLQILQERRLLAESGRISYASLVALLDLVEKEESFLISQAKSQILAGLKRFIDED TETEVHYKALVCRQFQNDFEHLGFDAKEGESDEDEMVRQTALSYLIQADYQPAVLAAASV FQAHKENIESIPASVRGLVLINQMKQENSLSLVEEYVNAYVATNDSNFRRQLTQALSYLK NQEGLDYVLGKLKDKNVVKPQDLYLWYMNFLSKSFAQETVWNWAKENWEWIKAALGGDMS FDSFVNIPAGIFKTKERLDQYIAFFEPQTSDKALERNILMGIKTIAARVDLIEKEKAAVE SALKDY >gi|311101497|gb|AEKO01000005.1| GENE 230 225966 - 226622 800 218 aa, chain - ## HITS:1 COG:SPy1240 KEGG:ns NR:ns ## COG: SPy1240 COG0704 # Protein_GI_number: 15675200 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Streptococcus pyogenes M1 GAS # 2 218 1 217 217 305 75.0 4e-83 MMLRTPFEEELEKLHNQFYAMGTEVAAQLKKAVRAFISHDRDLAKEVIENDEIVNNYETK LEKKSLEIIALQQPVSSDLRTVITALKASSDVERMGDHAVAVAKATIRIKGEERITEIEA EIKKMGKAVRHMVEDALDVYLNSDEQRAYEIAASDEIIDNYFRDIQAMTVEGVRKNPDAA FAAKEYFQVLMYLERIGDYARNLCEWVVYLKSGKIIEL >gi|311101497|gb|AEKO01000005.1| GENE 231 226648 - 227406 202 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 13 234 20 230 318 82 29 2e-14 MTEPIISINDLSVYFNKKKALNNVTMDFYPNEITALIGPSGSGKSTLLRSINRMGDLNPE WTLTGAVSYNGHNVYSPRTDTVELRKEIGMVFQQPNPFPMSIYENVVYGLRINGIKDKTV LDKAVEESLKGASIWEEVKDRLHDSALGLSGGQQQRVCIARVLATSPKVILLDEPTSALD PISAGKIEETLYNLKDQYTLLLVTRSMQQASRISQRTAFFLDGELIEYSSTKDMFLNPQH KETEDYITGKFG >gi|311101497|gb|AEKO01000005.1| GENE 232 227419 - 228222 270 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 21 252 2 229 245 108 32 3e-22 MTKYNWDERHIITFPEKELALETKDLHVYYGQKEAIKGIDMQFEKNKITALIGPSGCGKS TFLRSLNRMNDTIDIAKVTGQILYQGVDVNASNINVYEMRKHIGMVFQRPNPFAKSIYRN ITFAHERKGVRDKQTLDEIVETSLKQAGLWDQVKDDLHKSAFTLSGGQQQRLCIARAIAV KPQILLMDEPAASLDPVATMQLEETMFELKEDYSIIIVTHNMQQAARASDYTAFFYLGDL IEYDETKKIFQDAALQSTNDYVSGRFG >gi|311101497|gb|AEKO01000005.1| GENE 233 228233 - 229117 931 294 aa, chain - ## HITS:1 COG:SP1398 KEGG:ns NR:ns ## COG: SP1398 COG0581 # Protein_GI_number: 15901252 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 294 1 294 294 468 86.0 1e-132 MNAKKIDKIAISTLYVIAGIIVTILAALILYILVRGIPHISWSFLTSRSSSYKAGGGIGV QLYNSFFLLVITLIISVPLSMGAGIFLSEYAKKGRLTNFVRTCIEILSSLPSVVVGLFGY LIFVVQFQYGFSILSGALALTVFNLPQMTRTVEDSLRTVHHTQREAGLALGLSRWETVCH VVVPEALPGIVTGIVLASGRIFGEAAALIYTAGQSAPALNWSDWNPLSISSPISIFRQAE TLAVHIWKVNSEGTTPDATAVSAGSAAVLLIFILIFNFGARRLGAYLHKKLTSA >gi|311101497|gb|AEKO01000005.1| GENE 234 229107 - 230021 860 304 aa, chain - ## HITS:1 COG:SPy1244 KEGG:ns NR:ns ## COG: SPy1244 COG0573 # Protein_GI_number: 15675204 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 304 1 311 311 426 83.0 1e-119 MKNEELVKQLTSPSKNSRLEKFGKTITFLCLALIVFIVAMILLFVAQKGLATFFVNKVSL VEFLFSGDWSPSEGKFGALPMILGSFVVTLLSALVATPFAIGAAIFMTEISPKGAKFLQP AIELLVGIPSVVYGFIGLQVVVPFVRLIFGGTGFGILSGTFVLFVMILPTVTFMTTDTLR AVPRHYREASLAMGATRWQTIWRVTLNAAKPGIFTAVIFGMARAFGEALAIQMVVGNSAV IPTSLTTPAATLTSVLTMGIGNTVMGTVSNNVLWSLALVLLLMSLGFNMLVKFITRERKR NYER >gi|311101497|gb|AEKO01000005.1| GENE 235 230024 - 230899 677 291 aa, chain - ## HITS:1 COG:SPy1245 KEGG:ns NR:ns ## COG: SPy1245 COG0226 # Protein_GI_number: 15675205 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 288 288 379 70.0 1e-105 MKKTKVLAVILSLAMAMLVLTGCASWIDRGQSITAVGSTALQPLVEAAADGFAEKNPDNI VNVQGGGSGTGLSQVQSGAVQIGNSDLFAEEKSGIDASKLVDYQVAVAGIAVITNKEVSV DNLTTEQLRKIFTGEITNWKQLGGKDLEITIINRAASSGSRATFDAVIMDGKSPIRTQEQ DSNGMVKSIVAQTPGAISYLSFAYLDDSVKTLKLNGFEPKAENVATNDWPIWSYEHMYTK GKPDSYTKQFLDYMMSDEVQENVVAKMGYISIHSMKVTKDADGNISKKSEE >gi|311101497|gb|AEKO01000005.1| GENE 236 231025 - 232335 1057 436 aa, chain - ## HITS:1 COG:SPy1246_1 KEGG:ns NR:ns ## COG: SPy1246_1 COG0144 # Protein_GI_number: 15675206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pyogenes M1 GAS # 1 303 2 297 297 423 70.0 1e-118 MQFPSDFIEKYNNLLGDEAKDFFASFDQEAVSAYRTNPLKKQQKDFPDAIPETPWGHYGK ISGKSADHATGLVYSQEPAAQMVAQVAAPAKGSRVLDLAAAPGGKSTHLLSYLDNTGLLV SNEINPKRSKILVENIERFGARNVVVTNTLADKLAKVFKNYFDTIVFDGPCSGEGMFRKD PKAIQYWHKDYPSELAQLQKDILSDGLKMLAPGGQLIYSTCTWSPEENEGVVAWILENYP DLELVQIPKWNGMSDGIDFPETARMYPHHFKGEGQFIAKFQDKRVPELTRIKEGKSNLNK EQKQHWEDFAKKHLKTSLNGLLQVFGDNLYLLPKGLPDLSKVKIARNGLHLGIFKKKRFE PSFALGIALTSDEVVSSIELTQDQFAQYVSGNVVTLDQTHPNGWYQLLVDGNGFGFAKIV GNTVKNYYPKGLRFHI >gi|311101497|gb|AEKO01000005.1| GENE 237 232416 - 233183 589 255 aa, chain - ## HITS:1 COG:SPy1247 KEGG:ns NR:ns ## COG: SPy1247 COG0483 # Protein_GI_number: 15675207 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Streptococcus pyogenes M1 GAS # 1 255 1 255 262 296 56.0 4e-80 MENKLIFAKEIIKEAGAFIKESLSKTITVEEKTAFDDLVTNIDKQTQDLLVARIKSSFPS DNIFAEENGLVHNIKDGNVWVLDPIDGTVNFIVQQDNFCVMIAYYEEGQGKFGLIYNVMA DQLFYGGGQFDVYCNDKLLSAYKSRPLDRCLVASNGAMYAKNFHGLKDLIDKTLGVRVYG GAGLSMSKVLSGQILAYFSVIYPWDYAAASIMGENLGYHLETITGEPLDYSSRQAVMLVP KDRLEEIKDIMGSEN >gi|311101497|gb|AEKO01000005.1| GENE 238 233173 - 233454 356 93 aa, chain - ## HITS:1 COG:SPy1248 KEGG:ns NR:ns ## COG: SPy1248 COG4476 # Protein_GI_number: 15675208 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 4 92 3 91 92 105 65.0 3e-23 MTKGNYSYPLDPLWSTEEITTVLHFLSQVEKAYESKVDRDQLLQAYKAFKTVVPGKAPEK QLDKAFEEASGFSTYQAVKAAKAKDKGFVSLGK >gi|311101497|gb|AEKO01000005.1| GENE 239 233447 - 233860 259 137 aa, chain - ## HITS:1 COG:SPy1249 KEGG:ns NR:ns ## COG: SPy1249 COG1393 # Protein_GI_number: 15675209 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pyogenes M1 GAS # 1 134 1 134 134 213 82.0 5e-56 MVTLFLSPSCTSCRKARAWLTNHEVAFDEHNIITSPLTHDELMKILSYTENGTEDIISTR SKVFQKLNIDVDDLTIKELIQLISEYPNLLRRPIIMDNKRMQIGFNEDEIRAFLPRDYRK QELRQATIRAEIKGNND >gi|311101497|gb|AEKO01000005.1| GENE 240 233931 - 234842 405 303 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 17 296 17 304 317 160 32 6e-38 MKITSINDYKDIYQEKETVLVLGYFDALHRGHKVLFDKARQIADDKQLEVAVLTFNESPQ LTFQRYTDDLLLHITAPQRRCDLFEAYGTDQLYLTDFNSDFARTSSDDFIARYIKRLKAQ EVVVGFDYKFGHHRTDADYLARNFSGRVHVIEEQQSDGEKISSTRVRQLIREGKVKEANY LLGHEFSTRGIVVHGDARGRTIGFPTANLAPIDRTYLPADGVYVADVVIDGKRYRSMTSL GKNVTFGGTELRLEANIFDFEGDIYGKTIEVFWLDYIRDMIKFNNIDELCDQLEADKKIA EKF >gi|311101497|gb|AEKO01000005.1| GENE 241 234839 - 235720 1033 293 aa, chain - ## HITS:1 COG:SPy1251 KEGG:ns NR:ns ## COG: SPy1251 COG0130 # Protein_GI_number: 15675211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Streptococcus pyogenes M1 GAS # 1 291 1 293 294 387 69.0 1e-107 MISGIINLKKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVTGVLPIAVGKATRVIEYM TEAGKVYEGEITIGFSTTTEDTSGEVVQTTPITELDEVTVDQAMASFEGEITQIPPMYSA VKVNGKKLYEYARAGEEVERPQRQVTITEFVRTSPIELENNTAKFTFRVACSKGTYVRTL SVDLGAKLGYASHMSALRRTASAGLTLDKALTLSQISEMVEAGDTSFLLPIEFGVQDLPA VQVTEDDAKEISFGRFISIDSQEPLVAAFLGDKVLAIMEKRNQVYKPRKVLSQ >gi|311101497|gb|AEKO01000005.1| GENE 242 235841 - 237187 765 448 aa, chain - ## HITS:1 COG:SP0562 KEGG:ns NR:ns ## COG: SP0562 COG2461 # Protein_GI_number: 15900474 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 448 1 444 444 581 65.0 1e-165 MENNRIQILKEILLDLHHGASPESVQERFNQHFKGVSALEISMMEHELMSSEDGVTFEDV MSLCNVHANLFKGAIADVEVADADQEGHPVYVFKQENLALRSAILRIRRIIENISKPENE DFKSDLLNGLRHQMSLLGQFHNHYTRKEKLFFPIMERYGHDSPPKVMWGVDDDIRKLFRA AEAKLKELPDADLEEFSKSFEAFSEEFEAMIFKEEAILLMILLETFTQDDWLSIAEESDA YGYAIIKPSAVWKPKRERFEEENTETSQEPSRTRTNENTGKTQIIDTPEGQFTISFTPKP KTETVVDRETTQPFGNGYLSVEQANLILNHLPLEITFVNKEDIFQYYNDSVPANEMVFKR TPSQIGRNVELCHPPKVLDKVKKIFNLLKSGERDQVPMWFKSERLGKFVYVTYAAVRDDK GDFQGVLEYVQDIQPFFELESDLNRDID >gi|311101497|gb|AEKO01000005.1| GENE 243 237189 - 237422 269 77 aa, chain - ## HITS:1 COG:no KEGG:SMU.1152c NR:ns ## KEGG: SMU.1152c # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 4 77 3 76 77 109 77.0 3e-23 MTTNTIDLSQPVATIIKEHPEVKELLIDLGFKPLSNPAMLNTVGMVTSIKAGSKLANIPL DKIKQTLLFNGYDVIGD >gi|311101497|gb|AEKO01000005.1| GENE 244 237511 - 238131 746 206 aa, chain - ## HITS:1 COG:SPy1254 KEGG:ns NR:ns ## COG: SPy1254 COG0732 # Protein_GI_number: 15675214 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Streptococcus pyogenes M1 GAS # 13 203 8 197 198 233 63.0 1e-61 MSEKERPQLIIDYEANTDKLVRLGDVVDQFKGKAVPAKAEPGEFAVINLSDMTPNGIAYD DLKTFSEERRKLLRFLLEDGDVLIASKGTVQKVAVFEDQGKREVVASSNITVLRPKEKLR GFYIKFFLETEIGRAYLDYADKGKAVLNLSTADLLDIKIPEIPIVKQDYQIAAYLRGRAD YHRKMIRAEQEWENIQHNVTEALFGN >gi|311101497|gb|AEKO01000005.1| GENE 245 238259 - 238546 213 95 aa, chain - ## HITS:1 COG:SP1651 KEGG:ns NR:ns ## COG: SP1651 COG2077 # Protein_GI_number: 15901486 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Streptococcus pneumoniae TIGR4 # 1 86 78 163 172 137 70.0 6e-33 MSELDDTVVITISVDLPFAQARWCGAEGLENAIMLSDYYDNSFGKDYGVLIEEWHLLARA VLVADADNKITYVEYLDNINTDSNYEAAVAAVKSL >gi|311101497|gb|AEKO01000005.1| GENE 246 238534 - 238752 195 72 aa, chain - ## HITS:1 COG:SP1651 KEGG:ns NR:ns ## COG: SP1651 COG2077 # Protein_GI_number: 15901486 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Streptococcus pneumoniae TIGR4 # 1 47 10 55 172 60 65.0 6e-10 MPTFIGKPVTVAEDKQLQVGDTLRDFNLTTTDLTKKSLSEFDGKKKLSLSFHQSILVFVQ LKHVPLTRNCQN >gi|311101497|gb|AEKO01000005.1| GENE 247 238816 - 239571 468 251 aa, chain - ## HITS:1 COG:PM0231 KEGG:ns NR:ns ## COG: PM0231 COG0561 # Protein_GI_number: 15602096 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Pasteurella multocida # 1 247 1 249 251 119 33.0 6e-27 MKFVFDLDGTLCFDGMTMSKDLQKVLLTAPKYGHDIIFATARSYRDCLSILEGELRKLTV VGLNGGEVFRDECLVSQYTIPSSALRTIVSYCDTYNLPYFIDDTFNYAIQNPEQIPFLSN VDPLNKARILPVHELNEPIKVVIPLVEHEDIREDLIFNLNKLECLDLTYHDIERCLYINP KGVTKASTVLNHFGRDFVAFGNDQNDISLFKNAIYGVQVGNYPYLQDFADEVIPAINAVI AEKIRLLFEKF >gi|311101497|gb|AEKO01000005.1| GENE 248 239632 - 240912 1505 426 aa, chain - ## HITS:1 COG:lin0604 KEGG:ns NR:ns ## COG: lin0604 COG2873 # Protein_GI_number: 16799679 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Listeria innocua # 1 426 1 425 425 545 63.0 1e-155 MSREFSFETLQLHAGQTPDKETKSRAVPIYQTTSYVFDDAQEGEDLFALRKPGNIYTRIT NPTVAVLEERIAALEGGVGALATASGMAAITYAILGLAHAGDHVVAATTLYGGTFNLLKE TLPRYGVTTTFVDVDNPEEIEAAIKDNTKLVLIESLGNPLINIPDFEKIAEIAHSHNIPL VADNTFGTPYLINVITHGVDIVVHSATKFIGGHGTTIGGLIVDSGKFDWEASGKFPQLVE EDPSYHNISYTRDVGPAAFITALRTQLLRDTGAALAPFNAFLLLQGLETLSLRVERRVEN AKKIVDFLENHPKVEKVNYPGLPSSPYYDLAQKYFPKGPGSIFTFHVKGGQDEARTVIDN LEIFSDLANVADAKSLVVHPATTTHQQLAEADLLACGVTPNQIRISVGLENADDLIEDLK LALDKI >gi|311101497|gb|AEKO01000005.1| GENE 249 241033 - 243342 2206 769 aa, chain - ## HITS:1 COG:SPy1267 KEGG:ns NR:ns ## COG: SPy1267 COG0210 # Protein_GI_number: 15675225 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 769 1 772 772 1271 81.0 0 MNPLLTGMNDKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMINPWNILAITF TNKAAREMRERAMALNPATSETLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM KRILKTLNLDPKKWNERAILGTISNAKNDLLDEVAYEHQAGDMYTQIVAKCYKSYQEELR RSEAMDFDDLIMMTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEVIKNNRN RRPKKLWTQNDDGEQIVYYRANDERDEAVFVASTIDNIVREEGKNFKDFAVLYRTNAQSR TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNLIANPSDNISFERVVNEPKRGVGPG TLEKIRNFAYEQNMSLLDASANIMLSPIKGKAAQGVYDFANTILNLRDQLDGLSITETVE AILDKSGYLDALSMQQTLESQARIENIEEFMSVTKNFDETNTDGTEDETGIDRLGRFLND LALIADTDDGDMEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRSSEDPEELEEERR LAYVGITRAEEILFLTNANTRTLFGKTSYNRPSRFLREISDDLLQYQGLARPANSSFGVR FTKEEPTQFGQGMSLQQALQTRKANAQPQRHTGAQPFSKATGGLPFGKASDSGNSATDWE IGDIAHHKKWGDGTVLEVTGSGKTQELKIKFPEVGLKKVLSSVAPIVKK >gi|311101497|gb|AEKO01000005.1| GENE 250 243851 - 245194 1266 447 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 6 447 8 445 456 492 55 1e-138 MLDFFTTIDDFVWGPPLLVLLVGTGIYLTLRLGLLQIIRLPKAFKLIFAEDKGEGDISSF AALATALAATVGTGNIVGVATAIKTGGPGALFWMWIAAFFGMATKYSEGLLAIKFRTLDD QGNVSGGPMYYITHGFSGKWQTIAKPLAYFFAFAGVLVAWLGIGTFSQVNSITSSLQNSF DWSPKIVSVILALITAAIIFGGIQSISKVSEKVVPFMAGLYILAALVVIITNFSQLLPVL ETVFQSAFTGKAAVGGFAGATVMVAMRLGIARGVFSNESGLGSAPIAAAAAKTEEPVDQG LISMTGTFIDTIIICTLTGLAILVTGQWSGSLEGAPMTQAAFSSVFGTFGEIALTLSLVL FAFTTILGWSYYGERCFEFIFKSTKFLPLYRLIFVVMVALGGYLTLDVVWKIADIVNGLM ALPNLIALLVLSPIIFKETKSYFERHK >gi|311101497|gb|AEKO01000005.1| GENE 251 245322 - 246692 1685 456 aa, chain + ## HITS:1 COG:SPy1071 KEGG:ns NR:ns ## COG: SPy1071 COG0486 # Protein_GI_number: 15675063 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 456 1 458 458 707 86.0 0 MSITKEFDTITAISTPLGEGAIGIVRLSGTDAVAIANKVFKGKNLESVTSHTINYGHIVE NDETIDEVMVSVMRSPKTFTREDVVEINTHGGVAVTNEILQLLIRSGARMAEPGEFTKRA FLNGRVDLTQAEAVMDLIRAKTDKAMAVAVSQLDGSLKDLINNTRQEILNTLAQVEVNID YPEYDDVEEVTTALVREKTQDFQALLENLLATAKRGKILREGLSTAIIGRPNVGKSSLLN NLLREEKAIVTDIEGTTRDVIEEYVNIKGVPLKLIDTAGIRDTDDVVEKIGVERSKKALE EADLVLLVLNSSEPLTEQDRTLLEISKNSNRIILLNKTDLPQAIQMEELPEDVIPISVLK NENIDKIEDRINQLFFDNAGLVEKDATYLSNARHISLIERALESLEAVNQGLELGMPVDL LQVDMTRTWEILGEITGDAAPDELITQLFSQFCLGK >gi|311101497|gb|AEKO01000005.1| GENE 252 246832 - 247773 369 313 aa, chain + ## HITS:1 COG:BH1906 KEGG:ns NR:ns ## COG: BH1906 COG2207 # Protein_GI_number: 15614469 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 29 310 14 299 299 122 28.0 1e-27 MVLSYDFERFTMSQAATDTDFKHLIDFDDNLLPFRLTEIKVENGRPDILFHWHPELEIQY VYEGTARYHIDYDYFDSQAGDIFLIGPNELHSIHPIDNQSHHTDTLHFHLDMLGQSLVDL LSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKALLFEIFKMIRQKDRHYELLLKSKLEELI YLLYFYHLVKRKTSDDHYRKNDKIREIIDYINQHYAENLTIGKLSELMGYSKTHFMTIFK QHTGTSCTEFIIQARLHAACEELRNSVKPVLEIATNVGFNNLSNFNRQFKHYYDQTPSQY RKTHSNNNKTKKS >gi|311101497|gb|AEKO01000005.1| GENE 253 247927 - 248493 418 188 aa, chain - ## HITS:1 COG:SA0022 KEGG:ns NR:ns ## COG: SA0022 COG0737 # Protein_GI_number: 15925728 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Staphylococcus aureus N315 # 14 184 545 715 772 87 31.0 2e-17 MKEAETRDFSERPSAGFLQVAGARVYYDTTFPAEKRILSIDILDQETGVYKPLNTNETYY LVTNDFLAAGGDGFTMLGGPREEAPSLDTAFADYLTHADLTKYAVINPNSRTISISSADF AVLNKKENAEDTRVNPLNTIDRTVASKVLEKTKPVVSKVVTTPTGKAFFVSTSNETLKEI EKVTETLG >gi|311101497|gb|AEKO01000005.1| GENE 254 248733 - 249362 839 209 aa, chain - ## HITS:1 COG:SPy0901 KEGG:ns NR:ns ## COG: SPy0901 COG0461 # Protein_GI_number: 15674923 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 208 1 208 209 349 85.0 2e-96 MTLASQIASDLLDIKAVYLKPEEPFTWASGIKSPIYTDNRITLSYPETRTLIENGFVEKI KEEFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVVKGEKMVV VEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAEKNFADAGVKLVTLSNYTELI KVAKVQGYITADGLQLLRKFKENQETWQD >gi|311101497|gb|AEKO01000005.1| GENE 255 249450 - 250145 903 231 aa, chain - ## HITS:1 COG:SP0701 KEGG:ns NR:ns ## COG: SP0701 COG0284 # Protein_GI_number: 15900600 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 228 1 228 233 383 82.0 1e-106 MRENRPVIALDFPTFEDVKAFLAKFPADEKLYVKIGMELYYAAGPEIVRYVKDLGHSVFL DLKLHDIPNTVKSAMRVLSNLGVDMTNVHAAGGVEMMKAAREGLGYGPILIAVTQLTSTS EEQMRDFQNIQTTLQESVVHYAKKTAEAGLNGVVCSAHEVAKIKEATNEDFVCLTPGIRP SGAAVGDQKRVMTPADAHQIGSDYIVVGRPITQAADPVAAYHDIKAQWNGQ >gi|311101497|gb|AEKO01000005.1| GENE 256 250382 - 251338 1049 318 aa, chain - ## HITS:1 COG:SP0964 KEGG:ns NR:ns ## COG: SP0964 COG0167 # Protein_GI_number: 15900841 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 6 315 2 311 312 493 80.0 1e-139 MSETKSENRLAISLPGLDLKNPIIPASGCFGFGQEYAKYYDLDKLGSIMIKATTANPRFG NPTPRVAETPSGMLNAIGLQNPGVDAVLFEKLPWLQEHYPELPIIANVAGFSNEEYAEVS HKISKASNVKAIELNISCPNVDHGNNGLLIGQVPELAYAAVKASVSHSDVPVYVKLTPSV ADITSVAKAVEDAGATGFTMINTLVGTRYDLATRKPIIANGQGGMSGPAVFPVALKLIRQ VALASDLPIIGMGGVDSAEAAIEMFIAGASAIGVGTANFADPYACPKIIDRLPEVMDKYG ITTLEDLREEVRTDLLKK >gi|311101497|gb|AEKO01000005.1| GENE 257 251348 - 252151 864 267 aa, chain - ## HITS:1 COG:SP0963 KEGG:ns NR:ns ## COG: SP0963 COG0543 # Protein_GI_number: 15900840 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Streptococcus pneumoniae TIGR4 # 17 267 1 250 250 319 60.0 4e-87 MTFCSLERVVMILVEDLTIVSQREIAPRIFEMVLKGEMVADMNVGQFVHLKVPDPSKLLR RPISISEIDYDKKEATIVYRVEREGTAILSKMVAGQTIDTMGPQGNGFDISVIEAGQKAL LVGGGIGVPPLVETAKQLKTKGVEVVSVIGFANKDAVILEDKLRACGDVYVTTDDGSYGI KGYVSTVIDGFDWTPDAVYSCGAPGMLKYVDSKFENHPHAYVSMEARMACGMGACYACVV HVKGESDSKNLRVCEEGPVFPTGKVIV >gi|311101497|gb|AEKO01000005.1| GENE 258 252390 - 252938 583 182 aa, chain - ## HITS:1 COG:SP0804 KEGG:ns NR:ns ## COG: SP0804 COG0693 # Protein_GI_number: 15900697 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Streptococcus pneumoniae TIGR4 # 1 181 1 180 184 202 56.0 2e-52 MTKVAVVFAEGFEEIEALSPVDVFRRSGFDCSMLGLESTSVIGSHGIQVAMDGVFDGNFA DYDLVVLPGGMPGSTNLRDNETLIASLQEAAKAGKYVAAICAAPIVLERAGLLEGRKFTC FPGVEEQIASGDHQTDLVVVDGNIVTSRGAGTALAFAYALVDLLGGEGQQLAHTMVYDRL FQ >gi|311101497|gb|AEKO01000005.1| GENE 259 253071 - 253871 899 266 aa, chain - ## HITS:1 COG:no KEGG:STER_0965 NR:ns ## KEGG: STER_0965 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 222 1 222 222 352 88.0 1e-95 MNDIKKLCNATNLKYLAIVLMFLDHIHQMFEGMGAPLWLTMLGRLVFPIFLFLAADSFHY THDRMAFLRRLLYMSWFMTIGNTIISSVFHNGNLGLMNNAFSTFFITGIFICSWDLLAKG LRDKSYKELIQGIGVFLLPILSSIPVVVLGGIFETPHANPLVVQIISFILSLVPSIIMVE GGFVMVILGLLFYIFRTNRIAQIIVLAVISVIAHLFDPTGVQWMMVFAAIPMYFYNGERG SGNKNFFYIFYPAHIYLLWILASLFR >gi|311101497|gb|AEKO01000005.1| GENE 260 254347 - 256005 1772 552 aa, chain + ## HITS:1 COG:SPy1013 KEGG:ns NR:ns ## COG: SPy1013 COG1293 # Protein_GI_number: 15675016 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Streptococcus pyogenes M1 GAS # 1 551 1 549 550 800 76.0 0 MSFDGFFLHHMTAELREQVLYGRIQKVNQPFERELVLTIRNNRQNYKLLLSAHPVFGRIQ TTMAELPNPQNPNTYTMIMRKYLQGAVIEDIQQLENDRVLEISVSNKNEIGDSVKVTLVM EIMGKHSNIILIDKNESKIIESIKHVGFSQNSYRTILPGSTYIAPPKTDAKNPFDIADEK LFEILQTEDLSSRNLQKLFQGLGRDTANELSALLDTDKFKNFRAFFNREIEPNLTAKAFS AVRFSDSQDQPEFETLSALLDYYYLDKAARDRVTQQASDLIHRVQNELEKNKKKLVKQEK ELAATENAEEFRQKGELLTTYLSMVPNDKDSVELDNYYTGEKITIPLNVALTPNQNAQRY FKKYQKLKEAVKHLTGLIEETKQTIDYLESVEFSLSQANMDEIEDIREELVQAGFMKRRS TDKRHKRKKPEQYLASDGKTIIMVGRNNLQNEELTFKMAKKGELWFHAKDIPGSHVVIKG NLNPTDDVKTDAAELAAYYSKARLSNLVQVDMIDVKKLNKPTAGKPGFVTYTGQKTLRVT PTEEKIDSMRMK >gi|311101497|gb|AEKO01000005.1| GENE 261 256380 - 256589 207 69 aa, chain - ## HITS:1 COG:no KEGG:stu0949 NR:ns ## KEGG: stu0949 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 69 1 69 69 106 97.0 2e-22 MSKNSRFNDDFSYIMLIISLLTVFSVLFVKLTYLVALPYYKVITNLFAEKVSQSEAQKFK YWMRFLPVG >gi|311101497|gb|AEKO01000005.1| GENE 262 256673 - 256951 357 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477359|ref|ZP_04061995.1| ## NR: gi|228477359|ref|ZP_04061995.1| putative membrane protein [Streptococcus salivarius SK126] # 1 92 420 514 514 148 91.0 1e-34 MHLFFVTYMQGYLLVLYLGGAFYYAFTYKRMEDGATLGLYAFLYHFGGILFHLISEKYTL PYIYLQIPMIAAGYNHMTQTLSRYLKNMQKSS >gi|311101497|gb|AEKO01000005.1| GENE 263 257000 - 258352 1049 450 aa, chain + ## HITS:1 COG:SP1939 KEGG:ns NR:ns ## COG: SP1939 COG0534 # Protein_GI_number: 15901763 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 2 439 3 440 456 519 65.0 1e-147 MKNASVDLLRGPILRSLLIFALPILISNIFQQLYNTADVMIVGRFLGPDALAAVGASSAI FDLVIGFALGVGNGMGVVIARYYGAQDYRKLRQSVAATVVIGLSLSALVMILGHFGLYPL LRFLGTPTSIIGQSYQYISMIVSCVGVTLGYNLCAGLLRAVGDSLTALYFLIFSALVNIV LDLFFITQLHLGVQSAGLATIISQGLSAILCLYYIKKRVTFLLPHKSDCVLDSSLYLDLL GQGMAMGLMNSIVSIGTVTLQYAINGFGSLIISAQVSARRIMSFAVLPLTSLASGMTTFT SQNFGAQQFKRIVAGLKQSCLVSITWSVIACVLLYVASPFLAGLISGSDNAVIIDNASLY LRICSLFYPILGILFIFRNSLQGLGKKLTPLTSSFIELFGKILFVVFVIPYMGYLGVILC EPLIWIPMTIQLYFSLRKHIRRLFVSKPPF >gi|311101497|gb|AEKO01000005.1| GENE 264 258495 - 258821 324 108 aa, chain - ## HITS:1 COG:no KEGG:str0944 NR:ns ## KEGG: str0944 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 48 108 1 61 91 103 85.0 2e-21 MTGEREDLYEDLSEIAPTVGYYINTNENWDYYETSPKVAEIFDKRGEMKKDLDRVDAKEA VFEENVKAKFGSQKLMYLSVTDNEIRYYAYGHFGYLYDTYKFNRAETL >gi|311101497|gb|AEKO01000005.1| GENE 265 259169 - 259804 449 211 aa, chain + ## HITS:1 COG:SP0104 KEGG:ns NR:ns ## COG: SP0104 COG0546 # Protein_GI_number: 15900047 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Streptococcus pneumoniae TIGR4 # 4 206 5 205 210 205 49.0 4e-53 MIFTHIFFDLDGTLIDSSEGIHNGFVQTFERLGLPVPSNKKIRTFMGPPLEVTFKEEISE EGAAQAVQLYRDYYETKGQFEAHLYDGIKEVLKKLNQDPNKKIYITTSKNEPTARKMCKY LGITEFFDGIYGATPTAFNKADVLQRAITENNANKDQSVIVGDTKYDMIGGKTVGIKTLA VTWGFGTNETLLAENPDFVADTAQELWNILK >gi|311101497|gb|AEKO01000005.1| GENE 266 259864 - 260628 816 254 aa, chain - ## HITS:1 COG:no KEGG:str0941 NR:ns ## KEGG: str0941 # Name: not_defined # Def: phosphorylase Pnp/UDP family protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 254 1 254 254 477 89.0 1e-133 MIHKHEIPILEFDDNPQAVIMPTHENLDLNLPARCVYAFLEEEIERYATSVGAEKVGEFV SATKIYPVYVMTYNREEICLAQAPVGSAAAAQLMDWLIGYGVKQIISTGTCGVLVDMPEN VFLIPTRALRDEGASYHYVAPSRYIDMNTQALGAIERTLKQEKIPYEEVMTWSTDGFYRE TPDKVAYRIEEGCSVVEMECASLAAVAQLRGAIWGLLLFTADSLADIDNYNQRNWGSEAF DKSLELCLDIIVQM >gi|311101497|gb|AEKO01000005.1| GENE 267 260830 - 261453 454 207 aa, chain - ## HITS:1 COG:lin0926 KEGG:ns NR:ns ## COG: lin0926 COG1309 # Protein_GI_number: 16799997 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 22 138 25 148 218 78 35.0 1e-14 MSESVFESFEAYLKGADYPKGKKKIMQAAVDLISTKSYNGTSTLQIAKHAGLSQATLFKY FKTKEDLLTAILHPVVPGLFGRFFEELLALETTEEKVHYLVQNRMAYLKKNRALMKIIFQ EIFSNKKLRKEQLYIWNTLQDKLLVLHKELIADSRVNPEITVPQMVRICIGPLLAYFAQL YIVSDNSDIREEDLNLLEKQILGGLWK >gi|311101497|gb|AEKO01000005.1| GENE 268 261477 - 262559 900 360 aa, chain - ## HITS:1 COG:lin0925 KEGG:ns NR:ns ## COG: lin0925 COG0842 # Protein_GI_number: 16799996 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Listeria innocua # 1 360 1 371 371 219 38.0 5e-57 MRTIAIAKKVIKELLRDKRTLALMFVAPVFIMWLMNLMFSASTTVTVKLATQDVPSSLVS RMDDLAHVSVKNYKDLVQAKEALNDEKVDAVISYKDGEYHVAYANTDASKTSVTRQVLRT SIASEDTNQLLARVKQSLPQLQLKVKSPEIKESYEYGNEDTGFFAKMIPVLIGFVVFFFV FLISGMALLKERTSGTLDRLLATPVKRSEIVYGYMLSYGLIAILQTAVVVLAAIWLLNIE VVGSLLNVIIVNVVLALVALAFGILLSTLAKSEFQMMQFIPLVIMPQLFFSGIIPLDSMG DWAKTLGKFLPLTYSGDAMSQIILYGRGLGDILPNIGVLLVFLVALTVLNIVGLRRYRKV >gi|311101497|gb|AEKO01000005.1| GENE 269 262561 - 263277 267 238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 218 1 221 311 107 31 6e-22 MKTLLHLQDLEKSFGHKMVLDHVGFELQSGEIIGLIGPSGAGKSTMIKTMLGMEKADSGI ALVLDQTMPNRHILGDIGYMAQSDALYEALSGQENLEFFGQLKGLSKKDLSFEIAHVAQV VDLTDHLNKVVSGYSGGMKRRLSLAIALLGNPQLLILDEPTVGIDPSLRKKIWRELMTLR DNGVGILVTTHVMDEAELTDKVGLLLGGNIIAFDTPSKLKESYGVSSIEGVFLKAEGE >gi|311101497|gb|AEKO01000005.1| GENE 270 263468 - 263635 95 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477472|ref|ZP_04062108.1| ## NR: gi|228477472|ref|ZP_04062108.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 54 191 243 263 69 79.0 6e-11 MTIFIYDNESVKEQDMKDAAKKLDASDLPNGKYNFLYSNTKDENQDSSFSRAFKK >gi|311101497|gb|AEKO01000005.1| GENE 271 263675 - 264196 487 173 aa, chain - ## HITS:1 COG:no KEGG:LSL_1401 NR:ns ## KEGG: LSL_1401 # Name: not_defined # Def: hypothetical protein # Organism: L.salivarius # Pathway: not_defined # 1 147 1 147 148 212 92.0 3e-54 MKKKIYQCLLSFLILFLALFLTGFRKMKTSDYNKVRGVIVENCNKVGLHGKVTITKLYWT ALEIPTYYVTYTYSEKTYDDQKVVLEQNTAIHEEGSSDSYGNVPEYKESFLKQKSIQKVE KKIEKQLKKQKIGLPISSFSFLSNFSHDEKEKNLDTLTSDNLKAGKKDFAGNY >gi|311101497|gb|AEKO01000005.1| GENE 272 264579 - 266354 2320 591 aa, chain - ## HITS:1 COG:SP0730 KEGG:ns NR:ns ## COG: SP0730 COG0028 # Protein_GI_number: 15900627 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Streptococcus pneumoniae TIGR4 # 1 591 1 591 591 1162 97.0 0 MTQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAA VMQAKFGGSIGVAVGSGGPGATHLINGVYDAAMDNTPFLAILGSRPVNELNLDAFQELNQ NPMYNGIAVYNKRVAYAEQLPKVIDEACRAAVSKKGPAVVEIPVNFGFQEIDENSYYGSG SYERSFIAPALNEVEINKAVEILNNAERPVIYAGYGGVKSGEVITELSRKIKAPIITTGK NFEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFPFAEVYEAFKNTEKFIQVD IDPYKLGKRHALDASILGDAGQAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGK TEGELQLYQVYNAINKHADQDAIYSIDVGDTTQTSTRHLHMTPKNMWRTSPLFATMGIAL PGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINVVFSNGKYAFIKDKYED TNKHLFGCDFPNADYAKIAEAQGAVGFTVNRIEDIDAVVAEAVKSNKEGKTVVIDARITQ HRPLPVEVLELDPKQHSEEAIKAFKEKYEAEELVPFRLFLEEEGLQSRAIK >gi|311101497|gb|AEKO01000005.1| GENE 273 266716 - 268938 1900 740 aa, chain - ## HITS:1 COG:SP0729 KEGG:ns NR:ns ## COG: SP0729 COG2217 # Protein_GI_number: 15900626 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 88 740 1 660 660 877 71.0 0 MVEKQKAVVENGVQKIRITAEKGYSPKEFQLQKGIPAEITFHRVNPSGCYKEILFEDQGI LEPLEVGVDKVISFTPTETGDFEFSCGMKMQKGSYTVVEKRRRVLNLRGRFWITSIFTLP LLILMIGMWAGFVSHPVSRWGTFLATTPIMLVAGVPFIKSAWASFKKHHSNMDTLVALGT LVAYVYSVFALFTNQPVYFEAAGFIIFFILLGQIFEERMRNNASEAVEKLLDLQAKTAQV LRDGNYVEVAAEDIQINDLIRVRPGEKIAVDGTIVEGSTTIDESMVTGESLPVEKSVGDA VIGSTINSNGTILFKAEKVGSETLLSQIVDFVKMAQSSRAPIQDLTDKISGIFVPVVTIL AIATFWVWSVLLGASLQEAMLYAVSVLIIACPCALGLATPTALMVGTGRSAKMGVLIKNG TVLQEVQKIQTVVFDKTGTITIGQPLVTDVVGDEARVLTLAASLETFSEHPLAQAVLSQA EEKGLVLSPVENFQAIEGKGVQGQIDQQLVTLGNGKLHDGTAMDPELEKRMVELQEQAKT VINLAVDGQVIGLIAIQDAPKASSKEAIKKLKERGLKTVMLTGDNERVAQAIAKQVGIDT VIADVLPQEKASAIQKLQEASKVAFVGDGINDAPALSIADVGIAMGSGTDIAIESGGIVL TQNDLLGVVRAFDMSQKTFRRILLNLFWASIYNILGLPIAAGVFVGLGLTLNPELAGLAM ALSSLSVLTSSLLLNVAKID >gi|311101497|gb|AEKO01000005.1| GENE 274 268949 - 269320 303 123 aa, chain - ## HITS:1 COG:SP0728 KEGG:ns NR:ns ## COG: SP0728 COG4633 # Protein_GI_number: 15900625 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 123 1 123 123 184 65.0 4e-47 MFGLLISIVCLLVVAFIAWWFFAEHEKVSGHARQKSGYQEIEVEVMGGYSPETIVLKKNV PARIIFNRKDPSSCLAQVIFPDFGVHEDLPLGEKHVIEITPEKAGEYGYSCGMNMMHGQM IVE >gi|311101497|gb|AEKO01000005.1| GENE 275 269336 - 269734 327 132 aa, chain - ## HITS:1 COG:SP0727 KEGG:ns NR:ns ## COG: SP0727 COG3682 # Protein_GI_number: 15900624 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 131 3 133 133 154 66.0 4e-38 MQISNAEWRIMKIIWMEGKQTSTDLIAVLSERFDWSKSTIKTLLTRLVEKGCLTREKSGK AFVYSALLTQDQSLDLVVEEVKDKVCSKRIVQVLENLIQASDFTLADLNQLQQVLEEKKA EAVETVPCNCMS >gi|311101497|gb|AEKO01000005.1| GENE 276 270198 - 271235 1285 345 aa, chain - ## HITS:1 COG:SP1855 KEGG:ns NR:ns ## COG: SP1855 COG1063 # Protein_GI_number: 15901683 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 345 1 345 345 605 85.0 1e-173 MKSAVYTKAGKVGLAEIDRPHIKVPDDVILRIVRTCVCGSDLWSYRNPEIEEGHRNSGHE AIGIVEEVGEEVTTVKPGDFVISPFTHGCGQCDACRAGFDGSCDNHLGNNWSGGVQAEYI RFHFANWALIKIPGQPSDYSEGMLKSLLTLADVMPTGYHAARVANVQKGDKVVVIGDGAV GQCAVIAAKMRGASQIVLMSRHEDRQKMALESGATAVVAERGEEGIAKVREILGGGADAA LECVGTEVAVEQALGVLHNGGRMGFVGVPHYENRAIGSTFGQNTTIGGGPASVTTYDKQV LLKSVLDGDINPGRVFTTSYKLEDINQAYKDMDERKTIKAMIVIE >gi|311101497|gb|AEKO01000005.1| GENE 277 271307 - 272212 645 301 aa, chain - ## HITS:1 COG:SP1857 KEGG:ns NR:ns ## COG: SP1857 COG1230 # Protein_GI_number: 15901685 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Streptococcus pneumoniae TIGR4 # 1 296 4 299 299 467 78.0 1e-131 MKTKRAVWLAFFLNLSFAIVEFIAGGIFGSSAVLADSVHDLGDALAIGLSAFLETISNRQ EDSHYTLGYKRFSLLGALVTAVILMTGSGMVILENVSKLFHPQPVNDEGLLWLGMFAISV NVLASLVIRKGQTKNESILSLHFLEDTLGWVAVILMAIVLRFTDWYILDPLLSLAISIFI LSKAIPRFWSTLKIFLDAVPEGVDIQKIKKDLAELDHVASINQLNLWTMDGLEKNAIVHV CLEHVKHMEVCKESIRNLLQERGFQNVTIEVDEDLATHRSHKRKIEKLEVEQNHGHDYHY H >gi|311101497|gb|AEKO01000005.1| GENE 278 272310 - 272885 402 191 aa, chain + ## HITS:1 COG:SP1858 KEGG:ns NR:ns ## COG: SP1858 COG1309 # Protein_GI_number: 15901686 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 13 186 1 174 178 233 71.0 1e-61 MYVTEQFVHSVHMTAQDRRITKTRKAIYNAFLQLLNLKDYETITVQEIIDLADVGRSTFY SHYESKELLMDELCQKLFHHLFERNNQLSTHDYLAHIFQHFKKNQDHVTSLLLSKNDYFI RQLRKELEHDVYPMVADELIHSHPNIPHSYLKHLVVSHFIETLSWWLKKGKSYSEQEVVQ FYLEILNVASN >gi|311101497|gb|AEKO01000005.1| GENE 279 272902 - 273225 72 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477458|ref|ZP_04062094.1| ## NR: gi|228477458|ref|ZP_04062094.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 37 93 30 86 110 87 77.0 2e-16 MYHKKENYASPHSSQLFHSFLGPCFCTSSFISQRFRIKKGKKTLGIYLLFLGSSLATFSL ILYFFLPIVTLSLWMIGCGLICYGAYWNGKHKKTSIQPAMSFGLESL >gi|311101497|gb|AEKO01000005.1| GENE 280 273318 - 274190 747 290 aa, chain - ## HITS:1 COG:XF2716 KEGG:ns NR:ns ## COG: XF2716 COG1028 # Protein_GI_number: 15839305 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Xylella fastidiosa 9a5c # 3 284 7 289 296 159 36.0 6e-39 MVKTILITGATDGIGKHLAKKLASEGHQVILHGRNPQKLELALQEVRSVSLRDRVSSYLA DFSKLDDVYRFVEEIKRDFQRIDVLFNNAGLYAGKDRKASAENVELTFMLSVLVPYILTT ELSPLLEKAADGRVINTSSYMHHFAKVKDLDFQFEKEYNPGLAYNNSKLYTIWMTRYLAR KFFLKASNITINAYHPGLISTNLGNDSSDEKTKKSLFGRLMKSLSKDLDQGIETGYYLTL SEEVRGLTGYYFDEKKVKSVSEKGYTFEKARKLMDYCQNNVKMFKEKQDV >gi|311101497|gb|AEKO01000005.1| GENE 281 274192 - 275028 840 278 aa, chain - ## HITS:1 COG:MT3266 KEGG:ns NR:ns ## COG: MT3266 COG0596 # Protein_GI_number: 15842754 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 2 276 26 298 300 226 43.0 3e-59 MSYLTTKNQYITVQGNQIAYRELSKVKSKLPLLMLVHLAATLDNWDPKLLDLIAEKHHVI VVDLPGVGASQGKVAPTIPGMAEQTIDFVKAVGYDKINLLGLSMGGMIAQEIIRINPTLV SRLILAGTGPRGGKEVDKVTGKTFNYMFKAGLERIDPKRYIFYNHDEQGKIEALKVLGRM GMRTKEFADKDMSVPGFLTQLKAIKRWGKDPQDDLKFITQPTLIVNGDKDMQIPTENSYD MHEKIKDSKLIIYPNAGHGSIFQYAEEFSKELIAFLGD >gi|311101497|gb|AEKO01000005.1| GENE 282 275040 - 276044 1107 334 aa, chain - ## HITS:1 COG:AGpA656 KEGG:ns NR:ns ## COG: AGpA656 COG0604 # Protein_GI_number: 16119675 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 332 35 357 359 215 37.0 1e-55 MKAAQHTTYNKKNITLNITEVAKPSITDKEVLVKVTAAGVNPLDNMISRGEVKMIVPYKL PQTAGNEVVGIIEETGTQVKNLKVGDRVFGRLPLDHIGAFAEYVAVDSQALAKVPDYLSD EEAAAVPLTALTIMQSLELMGAQAGKTIFISGGTGGVGGMAIPIAKAKGLKVITNGAGDS ADRVLNLGADRFIDYKIEDYTKTVSQVDYVLDTLGGAETEKQMSIMKKGGQLVSLRAMPN GAFAKRMNLPKWKQILLGLAGRKFDKMADKYGVHYHFIFVESNGAQLQEVADLFSKLEIK PSIDTVYPFEEVNSALDKVANGRSRGKTVLSFKK >gi|311101497|gb|AEKO01000005.1| GENE 283 276121 - 276552 322 143 aa, chain - ## HITS:1 COG:BS_ywnA KEGG:ns NR:ns ## COG: BS_ywnA COG1959 # Protein_GI_number: 16080716 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Bacillus subtilis # 1 135 2 133 133 99 41.0 2e-21 MDTKFSVALHILTMISESKETLSSQALAESVGTNASYIRKVVALLKNAGLIQSQQGKTGY QPSKSPKDITLLNIYFATQEVSHISLFPVHQNSNLDCPVGKHIQAAVSPLFVSAEAQLEK ELAHQTLEDVIDNLYKEAKQKRN >gi|311101497|gb|AEKO01000005.1| GENE 284 277147 - 278403 529 418 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 477 61.0 1e-134 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLRLKKRRFQCKSCRRITVAKTSIVEKNCQISNLVQQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGELAFVAQNYETNKLIT ILDNRRQTTIRNYFLKYPLKARQKVQFITMDMSGAYIPLAKKLFPNAEIIIDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENMSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311101497|gb|AEKO01000005.1| GENE 285 278499 - 279299 254 266 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 28 247 156 375 398 102 29 2e-20 MSTIELNHLTFTYPERSFSLDVEDKHFADPMVAIVGQNGAGKSTLFKLLTGLLTPQTGVI KIDGENFNDLKPVEKLLKVGITFQNPDDQLFNPTVQREVEWSVAQVMDDHDTITRRALAA LKRVGLDDKTAESPYDLSLSERKLLSVATVLAVDPAIYLFDEPMMSLDWESRRKLTAIFH ELADSGHQVVTITHDMDWVAAEFESVYVMEHGKFGFAGSPRELFSDHELVQRVGLLPPRI MDIAESLGDSQTYLSVNDYCQKNRDV >gi|311101497|gb|AEKO01000005.1| GENE 286 279286 - 280122 304 278 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 16 234 139 353 398 121 34 3e-26 MDEDKRIVIENLTTRYPGTEQPQLRQINAEVHTGQVVGIIGNSHSGKSTLCRVLAGVIPK IVSAEIEGDWHMFGQRVSDNWPVYNAMNGVVLQNPAGQLSGLADTVADEIAFDLINQGMA EGLIQKRVEAVATQMGLIEQLNLRPESLSGGQIQRLAIATAIAANPAVLIMDDPTSEMDP LGRRQFFQWLAQVKETTVFIVTSEIDDLCEVADVVWVLHEGQMVAQGRPGEVFNHLAADW QIPAPTIQQLAQKMDWHLADGRYPVNYADLKEVRYVHN >gi|311101497|gb|AEKO01000005.1| GENE 287 280098 - 280889 153 263 aa, chain - ## HITS:1 COG:SP2219 KEGG:ns NR:ns ## COG: SP2219 COG0619 # Protein_GI_number: 15902023 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 21 253 19 256 264 62 26.0 1e-09 MTDQTFISGAPRVKLKWYQVIDPITKLLFILDMTLLSFASMNLLLQAGLILAATLLLLFS KLSSTIFKALGFSLFLICTMLIIQGLFYSRNQTVLFSVLGVSFYKEGLIYAATLGCRVLV IILTSGFFMVTTSISENAAYLELSGLSYKTVYVLMSVCYILPEMMRNMRKIQQAQKVRGT NPQKTLIQKLKSVLPVLIPLVIKTLDQSMARSISLQLRGFDNLNRTVRTSQRVYRLSRTL HIGLTGLAILLIGWKIWTKINGL >gi|311101497|gb|AEKO01000005.1| GENE 288 280889 - 281491 452 200 aa, chain - ## HITS:1 COG:no KEGG:SGO_0917 NR:ns ## KEGG: SGO_0917 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 200 1 200 200 339 99.0 4e-92 MKTEPIHRTSMWKFKLSAATMTLIPAAVGINYVAKALAEGLKLPVWLGSLGTFLASMLAG PVAGAISGFINNVIYGLTLSPISTVYAITSIGIGIAVGVLHANGWFSSARRVFVSAIIIA FVSAVISTPLNVIFWGGQTGIAWGDSLFAVMVANHAPVWLASFTDEFILDILDKVCVAYL AFFIYRQLPKRMVHFFSDDK >gi|311101497|gb|AEKO01000005.1| GENE 289 281806 - 282606 567 266 aa, chain - ## HITS:1 COG:PA2770 KEGG:ns NR:ns ## COG: PA2770 COG0384 # Protein_GI_number: 15597966 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Pseudomonas aeruginosa # 11 264 6 259 259 225 44.0 6e-59 MPISQYTIPQFIVDAFTDTVFKGNPAAVCLLDEWLSDTTLQNIAKENNLSETAFTVKDGD HYELRWFTPGGEIDLCGHATLATAFVLFQFIEEDAESLTFATQSGELLVSKKDDYYELNF PSYAMHQVVVTSEMEEAIGVRPLEAWLGRDLVCILPHENDVINASPDFDKVKALDGLLLN ITARGSNYDTVTRSFAPKLSVKEDPVCGSGHCHVIPLWANKLAQAEFRAYQASERSGLLL CRIEGDRIYLAGKASLYSRGEIYIMD >gi|311101497|gb|AEKO01000005.1| GENE 290 282717 - 284237 1232 506 aa, chain - ## HITS:1 COG:SP1860_2 KEGG:ns NR:ns ## COG: SP1860_2 COG1732 # Protein_GI_number: 15901688 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Streptococcus pneumoniae TIGR4 # 208 505 1 298 299 478 80.0 1e-134 MSNLISTFQERFGDWVAALGQHLQLSLLTLLLAIFLAVPLAIYLSTRKRVSNWVLQLAGV FQTIPSMALLGLFIPIMGIGTLPALTALVIYAIFPILQNTITGLRGIDPSLEEAGVAFGM TKWERLKKFEIPLAMPVIMSGIRTAAVMIIGTATLAALIGAGGLGSFILLGIDRNNASLI LIGALSSAFLAIAFNLLLKWMEKAKLRTIFAAFAVMVIGLGVSYTPSLLSKPEKENLVIA GKLGPEPEIIANMYKILIEENTDMTVTVKPNFGKTTFLYQALKKWDIAIYPEFTGTVTES LLKPAPQVDHDPEAVYKAARDGIKKQDNLALLKPMAYQNTYAVAVPKKIAQEYGLKTISD LKKVEGQLKAGFTLEFNDREDGNKGLQKVYGLHLQVSTMEPALRYQAIQSGEIQITDAYS TDAELARYDLVALEDDKQLFPPYQGAPLMKEAFLKKHPELEGILNKLAGKITEKQMSQMN YQVGVEGKSADQVAHGFLVKEGFVKN >gi|311101497|gb|AEKO01000005.1| GENE 291 284230 - 284958 344 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 227 1 230 245 137 33 7e-31 MIEYKNVALRYTEKDVLRDVNLRIENGEFMVLVGPSGSGKTTMIKMINRLLEPTDGNIYM DGKRIKDYDERELRLSTGYVLQAIALFPNLTVEENIALIPEMKGWTKEQITSKTEELLDK VGLPAAEYAKRMPSELSGGEQQRIGIVRAIIGEPKILLMDEPFSALDAISRKQLQELTKA LHKEFGMTTIFVTHDTDEALKLGDRIAVLQDGEIRQVAEPETILQAPATDFVANLFGGSL HV >gi|311101497|gb|AEKO01000005.1| GENE 292 284951 - 285805 867 284 aa, chain - ## HITS:1 COG:DR0011 KEGG:ns NR:ns ## COG: DR0011 COG0702 # Protein_GI_number: 15805052 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Deinococcus radiodurans # 2 269 9 280 293 117 32.0 2e-26 MIGMTGVTGKLGSYVANLVDKKGIASVHLARSPERAKIYASAEIRKIVYANTPEVVEALK GIDILLMVSARENPERVKEHKDFLDAAKLAGVEHIVYTSFYGADKKAIFTLSRDHAQTEA YIKELGFTYTFLRDNFYLDFLIDMALENGKIRGPAGSGLVSAVSRKDTSRVAAEILLNPK EWENQSLNLTGPEDLSMEEIVALLSKETGDAIEYVDESVEEAYESRKKWPAQTWEYDAWV STYTAIKAGEQAGVSTDIEKVLGHPASSLLDTLRDRKLIEEKND >gi|311101497|gb|AEKO01000005.1| GENE 293 285824 - 286273 525 149 aa, chain - ## HITS:1 COG:SP1863 KEGG:ns NR:ns ## COG: SP1863 COG1846 # Protein_GI_number: 15901691 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 6 149 4 147 147 180 65.0 7e-46 MDKMLGGYQALQIRLLNGRIFQKLLSKEPDAQYRSEQGKILTVLWQKEDGRATATDIALA TGLANNTLTSMVKKLKEQGLVTIQHCTQDKRKKYISLTDLGWAQKEIGDRVSEELGEIFY QGFSDQEIQEFEAYQERIITNLKAKENDI >gi|311101497|gb|AEKO01000005.1| GENE 294 286435 - 287154 768 239 aa, chain - ## HITS:1 COG:SP1392 KEGG:ns NR:ns ## COG: SP1392 COG3527 # Protein_GI_number: 15901246 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 239 5 243 243 408 84.0 1e-114 MSEAIKLFQYNTLGALMAGLYGGTLTVGELLEHGDLGLGTLDSIDGELIVLDGKAYQAKG SEGKVEVVEVSPDEKVPYAAVVPHQAEVIFRQRYEMTDKELEDRIESYYDGVNLFRSIKI KGHFKHMHVRMIPKSNADIKFADVATRQPEYEVDNISGTIVGIWTPEMFHGVSVAGYHLH FISDDLTFGGHVMDFVIENGIIEVGPVDQLDQRFPVQDRQYLFAKFNVDEMREDITKAE >gi|311101497|gb|AEKO01000005.1| GENE 295 287170 - 288846 1874 558 aa, chain - ## HITS:1 COG:L210 KEGG:ns NR:ns ## COG: L210 COG0028 # Protein_GI_number: 15673166 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Lactococcus lactis # 4 558 3 554 554 809 72.0 0 MSDEKQLYGADLVVDSLINHDVDYVFGIPGAKIDRVFDTLEDKGPELIVARHEQNAAFMA QGVGRITGKPGVVLVTSGPGVSNLATGLVTATDEGDPVLAIGGQVKRSDLLKRAHQSMNN VAMLEPITKYAAEVHDANTLSETVANAYRYAKSGKPGASFISIPQDVTDATVSVKAIKPM TDPKLGSASVSDINYLAQAIKNAVLPVLLLGNGASSEAVTYSIRQILKHVKLPVVETFQG AGIVSRDLEEDTFFGRVGLFRNQPGDMLLKKSDLIIAIGYDPIEYEARNWNAEISARIIV IDVEPAEVDTYFQPERELIGNVEATLDLLLPAIQGYKLPEGSVEYLKGLKNNVVEDVKFD RRPEEGKVHPLDLIEVLQDQTKDDMTVTVDVGSHYIWMARYFKSYEPRHLLFSNGMQTLG VALPWAISAALVRPKTKVISVSGDGGFLFSAQELETAVRLKLPIVHIIWNDGHYNMVEFQ EEMKYGRSSGVDFGPVDFVKYAESFGAKGYRATSKEEFASLLQEALVQAVDGPVLIDVPI DYKDNIKLGETILPDEFY >gi|311101497|gb|AEKO01000005.1| GENE 296 289170 - 289409 174 79 aa, chain - ## HITS:1 COG:BH0176 KEGG:ns NR:ns ## COG: BH0176 COG1943 # Protein_GI_number: 15612739 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 1 79 78 156 156 134 81.0 3e-32 MGYLKGKSSLMIFDRHANLKYKYVNRKFWCRGFYVDTVGRNQKRIEEYIRNHLQEDVIAD QLSLFEEYDPVTGEKNKRK >gi|311101497|gb|AEKO01000005.1| GENE 297 289442 - 289645 79 67 aa, chain - ## HITS:1 COG:SP1064 KEGG:ns NR:ns ## COG: SP1064 COG1943 # Protein_GI_number: 15900934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 52 1 52 157 97 82.0 7e-21 MRQDNNSLAHTTWNCKYHIVFAPKYRRQIIYGKYKASIGQILRLLCERKGTLKFMKQKLA QIIFTCW >gi|311101497|gb|AEKO01000005.1| GENE 298 289808 - 290149 231 113 aa, chain - ## HITS:1 COG:no KEGG:stu0912 NR:ns ## KEGG: stu0912 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 113 1 113 113 202 92.0 2e-51 MDITNFIPSQRQAMLKRFQQVEALELGAIRIELKVANPVGIIYECYIMAGDNYFSDQAVV SFRILYEKDLDRISLDVVDIPGRSSLSNYLKLLGIFEGLQNYLNREFAKVKNS >gi|311101497|gb|AEKO01000005.1| GENE 299 290559 - 292391 2315 610 aa, chain - ## HITS:1 COG:SPy1053 KEGG:ns NR:ns ## COG: SPy1053 COG0481 # Protein_GI_number: 15675045 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Streptococcus pyogenes M1 GAS # 3 610 2 609 610 1118 94.0 0 MPNIEELKQRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERER GITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEA QTLANVYLALDNDLEILPVINKIDLPAADPERVRTEVEDVIGLDASEAVLASAKAGIGIE EILEQIVEKVPAPQGDVEAPLQALIFDSVYDAYRGVILQVRVVNGMVKPGDKIQMMSNGK TFDVTEVGIFTPKAVGRDYLATGDVGYIAASIKTVADTRVGDTVTLADNPAAEPLHGYKQ MNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDV IQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRIDAIEEPYVKAQIMV PQEYVGAVMELAQRKRGDFETMEYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFD YELSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQ AAIGQKIVARTDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFL SVLSMDEDEK >gi|311101497|gb|AEKO01000005.1| GENE 300 292723 - 293982 914 419 aa, chain + ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 1 364 1 364 400 283 44.0 6e-76 MFKKILSVALAYVGIIVGAGLSSGQDLMQYFVSFGLVGLLGVLVLAVLNAFFGKIILTLG SYYRSNDHSEVLSKIAHPITNKILDLSLIISCFVIGFVMIAGAGSNLHQQFGFPIWIGAL ICTALVIIVSFMDFEKITNIIGIFTPIIIIMILIIAGQTFIGKSYNLNHLDMVARQLTPA MPNIWMAVINYFALCVMTGVSMAFVLGGSIMRIGVAKKSGTIGGAIVGLIIAVASLVLFA NVDSIKGVDIPMLILANRVHPLFAFTYAIVIFGLIFNTAFSLFYALAKRFSGDNVKKFRI YLITSVIIGFILSFMGFKELVGLMYPILGYIGMIMLFVLTVAWIRDKQNINEEMNLRRQM ITLINKKFHPKKVYSKKDKEKYNALGEESIIQTSELKKIYMTLWKMKTAKITVKKSKPV >gi|311101497|gb|AEKO01000005.1| GENE 301 293993 - 294178 194 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228476754|ref|ZP_04061420.1| ## NR: gi|228476754|ref|ZP_04061420.1| hypothetical protein STRSA0001_1383 [Streptococcus salivarius SK126] # 8 61 1 54 54 90 85.0 2e-17 MVLKGIPMSDILHYIAEHPFYSLFLLGIVVLAFGLAPFSSSSIENKRSAIINKHYNDNFK K >gi|311101497|gb|AEKO01000005.1| GENE 302 294259 - 295023 226 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 249 4 238 242 91 28 3e-17 MSKVAIVTGAGQGIGFAIAKRLVEDGFKVGILDYNAETAEKAVAELSEDKAFSVVVDVSK QAEVAAAFQKVVDHFGDLNVVVNNAGVAPTTPLDTITEEQFQRTFNINVGGVIWGAQAAQ AQFKALGHGGKIINATSQAGVVGNPNLTVYGGTKFAVRGITQTLARDLADSGITVNAYAP GIVKTPMMFDIAHEVGKNAGKDDEWGMQTFAKDITLKRLSEPEDVAAAVSFLAGPDSNYI TGQTIIVDGGMQFH >gi|311101497|gb|AEKO01000005.1| GENE 303 295234 - 295527 390 97 aa, chain - ## HITS:1 COG:NMA0994 KEGG:ns NR:ns ## COG: NMA0994 COG0607 # Protein_GI_number: 15793951 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Neisseria meningitidis Z2491 # 17 94 40 119 119 70 47.0 8e-13 MDLAQIQSYLAKGGLLIDVRSPEEYSEGHVKNALLIPHTQFFSAEIPAEKDASIYLYCKM GPRAEFAASVLKERGYTKVINLGGLDDMEALGFKFEK >gi|311101497|gb|AEKO01000005.1| GENE 304 295529 - 295942 507 137 aa, chain - ## HITS:1 COG:SP1959 KEGG:ns NR:ns ## COG: SP1959 COG0105 # Protein_GI_number: 15901782 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 135 1 137 137 167 59.0 7e-42 MQKTFFIIKPDAVKRHLMGQVIDRIERRGFIIERMEMLTLDEERLKEHYAQLVDKPFFPS IAEFMMSGPVVIGIMSGPGVIKSWRDMMGATNPGDAAPGTIRGDFATAPDGDMIPNIVHG SDSEESAAREIKIWFGE >gi|311101497|gb|AEKO01000005.1| GENE 305 296110 - 296595 703 161 aa, chain + ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 77 160 293 373 374 67 40.0 1e-11 MTKSKFQLVGSLLRPADLRKYKDEIEHRDNIQYPFYDALPGYQETETANIKQIVADQKAN GIDILTDGEFGRSMWHLGFVWGFKGIERYVLGLLSSKTTDLDDEERVLELLEKASQILPK ERLFLSHQCGFASCNSGNELATPQQWAQIKQGQDIAKKFFG >gi|311101497|gb|AEKO01000005.1| GENE 306 296665 - 298008 1479 447 aa, chain - ## HITS:1 COG:SPy1173 KEGG:ns NR:ns ## COG: SPy1173 COG1206 # Protein_GI_number: 15675145 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Streptococcus pyogenes M1 GAS # 1 443 1 443 448 840 93.0 0 MSQSKADYINVIGAGLAGSEAAYQVAKRGIPVKLYEMRGVKATPQHKTTNFAELVCSNSF RGDSLTNAVGLLKEEMRRLDSIIMRNGEAHRVPAGGAMAVDREGYAEAVTAEIENHPLIE VIREEITEILDDAITVIASGPLTSDALAEKIHKLNGGDGFYFYDAAAPIVDKATIDMNKV YLKSRYDKGEAAYLNCPMTKEEFMAFHEALTTAEEAPLNSFEKEKYFEGCMPIEVMAKRG IKTMLYGPMKPVGLEYPEDYKGPRDGDFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGE QKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLKQTFQSKSNPNLFFAGQMTGVEGYVE SAASGLVAGINAARLFKGEEEVIFPQTTAIGSLPYYVTHAESKHFQPMNVNFGIIKELEG PRIRDKKERYEKIAERALKDLQTFIEA >gi|311101497|gb|AEKO01000005.1| GENE 307 298126 - 299223 543 365 aa, chain - ## HITS:1 COG:alr5189 KEGG:ns NR:ns ## COG: alr5189 COG0642 # Protein_GI_number: 17232681 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Nostoc sp. PCC 7120 # 69 365 246 526 537 98 25.0 2e-20 MPVNLQEESLLNYQFKNAHGGIYGYFQSFERSDGIVIVNYQLSPRYHNAWMNQHFPNADI LMIGSMIVFILLIFIILTFYYANKLSQQLKPILKVTEKISQQDLDFKTTQSTIKEFNQVL SGLDHMRVALRESLMENWRAEQDKQNQISALTHDLKTPLTVSRGNAELLAMTPLNADQMD LLKHFQKGIAQVDAYVKELSELNKMSLKKTLSLEDISVREFVEDIFDQTLSLAQIKQINV AFDKKEIEKESIGNWDKSLLNRAIMNIVSNAVEHTPSGSHLLLTARVEEDEFKFICLDSG PGFSLESLEKATQLFYQEDKSRQSRSHSGLGLTIANDIIRLHHGSLSLSNDNGTGGAKVT IILPL >gi|311101497|gb|AEKO01000005.1| GENE 308 299493 - 300152 450 219 aa, chain - ## HITS:1 COG:SPy1081 KEGG:ns NR:ns ## COG: SPy1081 COG0745 # Protein_GI_number: 15675069 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 218 1 226 228 169 40.0 4e-42 MAQILVIDDQEDIVKLVVKALELQNHKVTGFTSVLDLDKNSLPRFDLILLDIMMPDVDGL QFCHEIRNQVDCPILFITAKTQEADIVQGLTYGADDYICKPFGVKELQARVAAHLRREHR ERHHKLSLGDFQFDLSAQELYVENQLLDLTKSEYGICQFLAENKGQVFSKEQIYTHLYGY EDKGSPTAVAEHIKNIRAKLKDVGQNPIETVWGIGYKWH >gi|311101497|gb|AEKO01000005.1| GENE 309 300188 - 301012 546 274 aa, chain - ## HITS:1 COG:no KEGG:STER_0924 NR:ns ## KEGG: STER_0924 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 274 1 274 274 418 92.0 1e-115 MKRLSLSGFQLKYIALITMVFDHIHYFFDYTGKIPIWFTMIGRLAAPLFLFAVIEGFVHT HNRKKYFLKIYALAILMGLIQFGFYNFLHPLVRPDGFFPQNMMLSSFAILLVALQGIAWI QEKKYLKGIPTLLFPLLLPWLMVPFYLLSANKPMLGFLLNLLNFTVLPVHTFISDGGTWL LLTGIAMYLCHKNLKKEVLAFVSVSLVWVLMAIVLGRPSFHDLMFKYIEWMEIFASPLML CYNGERGKGSKYLFYIFYPSHIYLLYALSVVFYR >gi|311101497|gb|AEKO01000005.1| GENE 310 301127 - 303259 2251 710 aa, chain - ## HITS:1 COG:SPy1164_1 KEGG:ns NR:ns ## COG: SPy1164_1 COG0550 # Protein_GI_number: 15675140 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Streptococcus pyogenes M1 GAS # 28 589 27 589 589 953 86.0 0 MATATKTKTTKKTTAKKATKKRATPKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRD LKKSSMSIDFENNYEPQYINIRGKGPLINELKKEAKKAKQVFLASDPDREGEAISWHLSH ILGLEPEEKNRVVFNEITKDAVKNAFVEPRAIDMDLVDAQQARRVLDRIVGYSISPLLWK KVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGSFKKGTKKFQASFYGLDGKKL KLNNNDDVQAVLSRITSDDFNVDKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMM VAQQLYEGINLGSGAQGLITYMRTDSTRISPVAQNQAAEFITERFGSKYSKHGSKVKNSS GAQDAHEAIRPSNVFQTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVTLSQN GVIFTANGSQIKFDGYMAVYNDSDKNKMLPDMAEGDTVKKVVTTPEQHFTQPPARYSEAT LIKTLEENGVGRPSTYAPTLDVIQRRYYVKLVAKRFEPTELGEIVNSLIVEFFPDIVDVK FTAEMEGKLDKVEIGKEQWQKVIDEFFKPFQKELEKAEEGIEKIQIKDEPAGFDCDLCGH PMVIKLGRYGKFYACSNFPDCHNTKAITKEIGVTCPTCGQGQVIERKTKRNRVFYGCDRY PDCEFTSWDIPVGRNCPKSGDYLVEKKVRGGGKQVICSNEECDYKESVVK >gi|311101497|gb|AEKO01000005.1| GENE 311 303427 - 304266 621 279 aa, chain - ## HITS:1 COG:SPy1163 KEGG:ns NR:ns ## COG: SPy1163 COG0758 # Protein_GI_number: 15675139 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Streptococcus pyogenes M1 GAS # 1 278 1 278 278 407 69.0 1e-114 MNNFELFKLKAAGLTNLNILNILDYQKTKDRKLSLRDMAVVSKSKNAVLFMEKYKSLDIK QLKEQFERFPTLSIFDKEYPIELKHTYNPPVLLYYQGNLDLLIKPKLAVVGARNCSETGK QSVRKIVSELGNQFTIVSGLARGIDTCAHMESLKNKGNTIAVIGTGLDVYYPKENKALQD YMAKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR DVFAIPGNILDGKSDGCHHLIQEGAKCITTGFDILSEFS >gi|311101497|gb|AEKO01000005.1| GENE 312 304333 - 305253 495 306 aa, chain - ## HITS:1 COG:SPy1596 KEGG:ns NR:ns ## COG: SPy1596 COG1940 # Protein_GI_number: 15675481 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Streptococcus pyogenes M1 GAS # 2 304 18 304 307 120 30.0 2e-27 MILAIDIGGTFIKFGLVDDDFKISNQSKVPTPPTLDDFWLTLEHIVSSHKDIISGIAIAC PGEINSKRGFIFKGGLIPYLTAIPLGSLLTKTFQLPVKVINDADAAALAEARYGSLQELD CGAALVLGTGVGLGLVSQEDLLSPLSVTQYLRAPSPQSMSQTSLPFQWELFMHGLVSLVD NKGSAVGFIHEASELLGLNQDDGPTVFSAIEENQSEDLNLLFKNYCHEIAVLVLNLQSFF RLEKVVIGGGISRQDTLIEGICDAYEELFNDKSELGFEPITLQACHFHNDSNLLGAASYF ASENDL >gi|311101497|gb|AEKO01000005.1| GENE 313 305260 - 306030 671 256 aa, chain - ## HITS:1 COG:SP1156 KEGG:ns NR:ns ## COG: SP1156 COG0164 # Protein_GI_number: 15901021 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pneumoniae TIGR4 # 1 253 1 253 259 340 70.0 2e-93 MATIKEVKEQLATLTDLDDYRWASFEEDSRAGVQTAIKQRRKAIQAEIAEEERLEMMLSY EKVLYAQGVELIAGVDEVGRGPLAGPVVAAAVILPKFCKIKGLNDSKKIPKSKHEAIYKQ VMKEAVAVGVGIKDNHVIDDVNIYEATKLAMAEAIENLSPKPEHLLIDAMTLDLPIGQTS IIKGDANSLSIAAASIVAKVTRDKMMADYDQEFPGYAFAKNAGYGTKDHLTGLDKFGVTP IHRRSFEPIKSIIKSR >gi|311101497|gb|AEKO01000005.1| GENE 314 306017 - 306871 1041 284 aa, chain - ## HITS:1 COG:SPy1161 KEGG:ns NR:ns ## COG: SPy1161 COG1161 # Protein_GI_number: 15675137 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 283 1 282 282 488 88.0 1e-138 MATIQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNK ADLADSNRTKEWRSYFETQGIKTLAINSKEQSTVKLVTDAAKSLMDDKIQRLRERGIQKE TLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPK FEDELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPERLEERFKGIDLEEEAPEIIM EMTRKLGFREDYDRFYNLFVKEVRDGKLGRYTLDIVGIDTDGDN >gi|311101497|gb|AEKO01000005.1| GENE 315 307000 - 307689 782 229 aa, chain - ## HITS:1 COG:SPy1198_2 KEGG:ns NR:ns ## COG: SPy1198_2 COG2932 # Protein_GI_number: 15675164 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 106 228 1 123 124 206 79.0 4e-53 MFSGQRLKEIREAQGMSQAAVAKHLGISRSSYFNWENGKTKPNQKNLSILAELFGVAETY FLSEHEIVEVYLELNEENRQEALRLTKALLEEQEAEKQKAPVISLYSYKVFERLSAGTGY TYFGDGNYDEVFYDEELDHDFASWVFGDSMEPTYLNGEVVLIKQTGFDYDGAVYAVDWDG QTYIKKVYREEDGLRLVSLNKRYGDKFAPYDEDPRIIGKIVGNFMPVEA >gi|311101497|gb|AEKO01000005.1| GENE 316 307784 - 308272 238 162 aa, chain - ## HITS:1 COG:SP1234 KEGG:ns NR:ns ## COG: SP1234 COG1827 # Protein_GI_number: 15901096 # Func_class: R General function prediction only # Function: Predicted small molecule binding protein (contains 3H domain) # Organism: Streptococcus pneumoniae TIGR4 # 1 162 10 171 171 226 69.0 1e-59 MALLKGAKEAINGQSLAEHFGVTRQIIVQDIALLRADGAQIISTNRGYIYKSSDDNSYVR RLFKVNHTVSDMKDELLAIVDNGGRIQNIMIDHPVYGEIQTLLKLTCRRDVSHFLYQSSS NDFHPLSDLTNGIHYHLVEADSEQDMAYIEEALNHLGFLVKE >gi|311101497|gb|AEKO01000005.1| GENE 317 308322 - 308849 424 175 aa, chain - ## HITS:1 COG:no KEGG:STER_0916 NR:ns ## KEGG: STER_0916 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 175 1 175 175 264 92.0 1e-69 MKPKKRIQEMTFAALLTAIAILIPSIMPIKLIIPPASYTLGSHVPIFLAMFISPWVTVFV ILASSLGYFMAGYPIVVVFRAFSHIIFGFLGALYLKKFPRTIENHKSSLLFNFVLGLIHA IGEVLACVIFYSVTGEDFQKLFYVLFVLVGFGTIVHSMIDYVIALSIFKSIRKIR >gi|311101497|gb|AEKO01000005.1| GENE 318 308962 - 310524 2105 520 aa, chain - ## HITS:1 COG:SP1287 KEGG:ns NR:ns ## COG: SP1287 COG0541 # Protein_GI_number: 15901147 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Streptococcus pneumoniae TIGR4 # 1 510 1 513 523 792 84.0 0 MAFESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERA VGHEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGK LANKLIKEQEARPMMIGADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQA RANKNDYVLIDTAGRLQIDETLMQELRDIKGFAHPNEILLVVDSMIGQEAANVAKEFNEQ LDITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGD LLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMANN PALANVKVDEKQIARKRAIVSSMTPEERENPDLLTPSRRRRIANGSGNTFIEVNKFIKDF NQAKQMMQGVMSGDMEQMMRQMGLNPNNLPKNMPNMPDMGNMDMSALEGMMGGAGMPDLG NMDLSQMLGGGLKGKVGSFAMKHAMKRQANKLKKAKKKRK >gi|311101497|gb|AEKO01000005.1| GENE 319 310557 - 310889 432 110 aa, chain - ## HITS:1 COG:SP1288 KEGG:ns NR:ns ## COG: SP1288 COG2739 # Protein_GI_number: 15901148 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 110 1 110 110 157 89.0 5e-39 MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEEFGVSRQAVYDNIKRTE KILEAYEMKLHMYSDYIVRNQIFDDIIEKYPDDSYLQEQIAVLSSIDNRD >gi|311101497|gb|AEKO01000005.1| GENE 320 310955 - 311653 729 232 aa, chain - ## HITS:1 COG:SP1446 KEGG:ns NR:ns ## COG: SP1446 COG2188 # Protein_GI_number: 15901296 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 232 4 235 235 312 65.0 4e-85 MLPAYIRIHDKIKEDVDDGAWKIGQRLPSERDLCETFDVSRMTVRQAITLLVDEGILERK PGSGTFVASSRVKEKMRGTTSFTEIVKSQGKKPSSELISYQRLHPNEFEIKNLGVLPQSH VIRMERVRFADDIPVAYEIASIPEKIIRGFKESDITEHFFKTLTDNGYEIGKSQQTISAS SANSSLAKHLKVKTGDALLSLIQISFLQDGQAFEYVRSYYVGDRFEFYLENN >gi|311101497|gb|AEKO01000005.1| GENE 321 311680 - 311862 90 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIFCTSFKVEMSVIITLSFYVTHGLFLMQSLYHKFMDLAPRFIRETVSPLLIFTIMSLFL >gi|311101497|gb|AEKO01000005.1| GENE 322 311822 - 313384 1930 520 aa, chain + ## HITS:1 COG:SPy1204_2 KEGG:ns NR:ns ## COG: SPy1204_2 COG0519 # Protein_GI_number: 15675169 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Streptococcus pyogenes M1 GAS # 206 520 1 315 315 598 94.0 1e-171 MTDISTLNDVQKIIVLDYGSQYNQLIARRIREFGVFSELKSHKITADEVRAINPIGIVLS GGPNSVYAEDAFGIDEEIFELGIPILGICYGMQLLTHKLGGKVVPAGEAGNREYGQSTLR LRAQSELFAGTPEEQVVLMSHGDAVTEIPEGFHLVGDSVDCPFAAMEDTEKNFYGIQFHP EVRHSVYGNDILKNFAFGICGAKGDWSMANFVDMQIAQIRETVGDRKVLLGLSGGVDSSV VGVLLQKAIGDQLTCIFVDHGLLRKGEGDQVMEMLGGKFGLNIIRVDASKRFLDLLAGVD DPEKKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDIIESGTETAQTIKSHHNVGGLP EDMQFELIEPLNTLFKDEVRALGTEMGMPDEVVWRQPFPGPGLAIRVMGEITEEKLETVR ESDAILREEIAKAGLDRDVWQYFTVNTGVRSVGVMGDGRTYDYTIAIRAITSIDGMTADF AKLPWEVLQKISVRIVNEVDHVNRIVYDITSKPPATVEWE >gi|311101497|gb|AEKO01000005.1| GENE 323 313590 - 314609 1187 339 aa, chain - ## HITS:1 COG:SPy0044 KEGG:ns NR:ns ## COG: SPy0044 COG1064 # Protein_GI_number: 15674284 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 337 1 336 338 548 86.0 1e-156 MRAVVVNQASTGIEVVDHEKPALVGHGQALVKVEYCGVCHTDLHVAHGDFGQVPGRILGH EGIGIVEEVGEGVETLKKGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYNVDGGMS DYALVTADYAVKVPEGLNPAQASSITCAGVTTYKAIKEAKVEPGQWVAIYGAGGLGNLAI QYAKKVFNARVVAVDINQDKLDLAKESGADLVVNGKEVEDVAGYIQEKTGGTHSAVVTAV SKVAFNQAVDTVRAGGTIVAVGLPSEYMELSIVKTVLDGIRVVGSLVGTRKDLEEAFDFG AQGLVVPVVETVPVDTAVEVFDQMEKGEIQGRKVLDFTK >gi|311101497|gb|AEKO01000005.1| GENE 324 314771 - 315052 176 93 aa, chain - ## HITS:1 COG:no KEGG:smi_1775 NR:ns ## KEGG: smi_1775 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 91 1 91 97 99 59.0 4e-20 MKKREIYDDKFQIDYFSDSYLKFEEDFYRYSAMDIPLTFLTDDILREMAISQKNYFLLNK ENARDGRNHYFHFEVSLLDFKTLVRQYRYLGND >gi|311101497|gb|AEKO01000005.1| GENE 325 315030 - 315338 113 102 aa, chain - ## HITS:1 COG:no KEGG:smi_1776 NR:ns ## KEGG: smi_1776 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 95 24 118 120 73 40.0 2e-12 MGFFLSEHTNSLHEDKTKENLTNHLDDLEKFTLLNQLYLGQLLGNFQIKAQGRRCRINGY VVDLDFDQVTIKSFKQYKGIRTKDILEISFGGENIDEEERNL >gi|311101497|gb|AEKO01000005.1| GENE 326 315404 - 316819 849 471 aa, chain - ## HITS:1 COG:L180104 KEGG:ns NR:ns ## COG: L180104 COG0389 # Protein_GI_number: 15672570 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Lactococcus lactis # 3 464 9 478 488 469 51.0 1e-132 MGYFDYSREPQSDIAFVDMKSFYASVECVERGLHPLKTSLCVMSRAENANGLILASSPIF KQVFGKSNVSRSYDLPFDIHSRKFHYYNAKKQGLPTDRDFVDYIESWAKVTFIVPPRMDL YIKKNIQIQHIFQNYASVEDILPYSIDEGFIDLTSSLNYFIPDRTVTRKDKLDMISGRIQ RDIWRETGIYSTVGMSNSNPLLAKLALDNEAKHTATMRANWSYEDVETKVWNIPHMTDFW GIGRRMEKQLNKLGICSIRELANSNPDTLKKELGIVGLDLFFHANGIDESNVHKPYKPKS HGLGNSQILPRDYDRQADIELILREMAEQVAIRLRRAHKKACQVSISIGFSKLEGKRSLQ AQMKIEPANNTRILIGHVIELFRKKYQGGAVRSMSVSYANFVDERLQILSLFDNPDDIDK EERLQAAIDSIRQEFGFTTIQKATALQEASRSLARSKLIGGHSAGGLDGLK >gi|311101497|gb|AEKO01000005.1| GENE 327 316932 - 317615 688 227 aa, chain - ## HITS:1 COG:SP1500 KEGG:ns NR:ns ## COG: SP1500 COG0834 # Protein_GI_number: 15901347 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 224 52 275 278 299 69.0 3e-81 MGYEEKDGSYVGFDIDLATAVFKLYGIDVEWQAIDWDMKETELKNGTIDLIWNGYSVTDE RKKSADFTEPYMVNEQVLVTKKSSGIDSVAGMSGKTLGAQAGSSGYDAFNASPKILRDIV ANQKAVQYSTFTQALIDLDSGRIDGLLIDRVYANYYLEKSGVLDQYNVMPAGYEGESFAV GARKADKTLIKKINQGFRTLYKKGEFQKISKKWFGEDVATDQVKGEK >gi|311101497|gb|AEKO01000005.1| GENE 328 317795 - 318424 419 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 204 1 210 245 166 40 1e-39 MLELKNISKQFGQHKIFDNYNLTVEEGKILAIVGPSGGGKTTLLRMLAGLETIDSGQIIY ENEEIPLDQMESRNLLGFVFQDFQLFPHLTVLDNLTLSPIKTMGMSKEDAQKKAQALLDR LGLGAHGNAYPYSLSGGQKQRVAFARAMMIDPKIVGYDEPTSALDPELRQEVEKLIVQNR ETGITQIVITHDIQFAQHIADEIVTINPK >gi|311101497|gb|AEKO01000005.1| GENE 329 318433 - 319074 775 213 aa, chain - ## HITS:1 COG:SPy1276 KEGG:ns NR:ns ## COG: SPy1276 COG0765 # Protein_GI_number: 15675231 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 213 1 213 213 283 81.0 2e-76 MSYVLEVLPALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRG TPLLLQLIFVYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAIPKGQYEAAKM LKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVLGVGDLLLESRTAANRDAT LAPMFVAGAIYLILVGVVTVASKHIEKKFNYYK >gi|311101497|gb|AEKO01000005.1| GENE 330 319274 - 319606 451 110 aa, chain - ## HITS:1 COG:SPy1277 KEGG:ns NR:ns ## COG: SPy1277 COG2824 # Protein_GI_number: 15675232 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 110 1 111 111 191 85.0 4e-49 MSLPNCPKCNSEYVYEDGILLVCPECAYEWDPNEVAEEEGLVVLDSNGTRLADGDTVTVI KDLKVKGAPKDIKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKI >gi|311101497|gb|AEKO01000005.1| GENE 331 319716 - 321524 2357 602 aa, chain - ## HITS:1 COG:SP0266 KEGG:ns NR:ns ## COG: SP0266 COG0449 # Protein_GI_number: 15900200 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 602 1 602 602 1061 91.0 0 MCGIVGVVGNTNATDILIQGLEKLEYRGYDSAGIFVAGKTSSQLVKAVGRIAELNAKTAG VEGTAGIGHTRWATHGKPTEDNAHPHRSETERFVLVHNGVIENYLEIKEEYLSGHHFKGQ TDTEIAVHLIGKFVEEEGLSTIEAFKKALHIIRGSYAFALMDSEDASTIYVAKNKSPLLI GLGDGYNMICSDAMAMIRETNQYMEIHDQELVIVKADSVEVQDYDGNVKARDSYTAELDL SDIGKGTYPYYMLKEIDEQPTVMRKLIQAYTDDKGQVTVDAEIIKAVQEADRIYILAAGT SYHAGFASKKMLEELTDTPVELGISSEWGYGMPLLSKKPLFVFISQSGETADSRQVLVKA NELGIPSLTVTNVPGSTLSREADHTMLLHAGPEIAVASTKAYTAQIAALAFLAKAVGEAN GNEKAKAFDLVHELSLVAQSIESTLSEKEVIDEKVSALLSETRNAFYIGRGQDYYVAMEA SLKLKEISYIQCEGFAAGELKHGTIALIEDGTPVISLLSDAVLASHTRGNIQEVAARGAK VLTIAEENVAKEGDDIVLNNVHPYLSPISMVVPTQLIAYFATLHRGLDVDKPRNLAKSVT VE >gi|311101497|gb|AEKO01000005.1| GENE 332 321730 - 322638 704 302 aa, chain + ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 301 1 301 301 489 82.0 1e-138 MRIQQLHYIIKIVETGSMNEAAKQLFITQPSLSNAVRDLEREMGIDIFIRNPKGITLTKD GVEFLSYARQVVEQTNLLEERYKSHTETRELFSVSSQHYAFVVNAFVSLLKRADMTRYEL FLRETRTYEIIEDVKNFRSEIGVLFLNGYNRDVLTKMFDDNRLTYTSLFKARPHIFVSKS NPLAKHKVVSLEDLEDFPYLSYDQGIHNSFYYSEEILSQIPHKKSIVVSDRATLFNLLIG LDGYTIATGILNSNLNGDNIVSIPLDIDDEIDIVYLKHEKATLSKMGEKFLDNLVKEVTF DN >gi|311101497|gb|AEKO01000005.1| GENE 333 322736 - 322954 243 72 aa, chain - ## HITS:1 COG:SPy1336 KEGG:ns NR:ns ## COG: SPy1336 COG2801 # Protein_GI_number: 15675275 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 71 197 267 268 100 76.0 7e-22 MSRKGNSPYNGMMKSFFCILKSEMFYGYEKMFKLIEHLKQAIVDYIDYYNNKRIKAKLKV LSPVQYRTKSFG >gi|311101497|gb|AEKO01000005.1| GENE 334 323046 - 323339 263 97 aa, chain - ## HITS:1 COG:SP1485 KEGG:ns NR:ns ## COG: SP1485 COG2801 # Protein_GI_number: 15901334 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 97 76 172 277 120 70.0 5e-28 MKALGLSDLIHCKRKYYSYQREVGKKAENLIQRQFEASKTMEKYYTDVTEFTIPASNQKL YLSPVLDGFNSEIIAYNLSTLLNLKQIKSMLEQTFTE >gi|311101497|gb|AEKO01000005.1| GENE 335 323868 - 324581 839 237 aa, chain - ## HITS:1 COG:SPy0857 KEGG:ns NR:ns ## COG: SPy0857 COG1705 # Protein_GI_number: 15674890 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 25 236 22 235 235 210 61.0 2e-54 MYRHLKKYFVFIVGAFICSLFFVLAFTTDRKNDNSVNAKAEAAYNQTTTAFIDSIGETAR QIGQDYNIYASVLIAQAILESNSGQSGLSQAPYYNFFGIKGSYNGNSVTMRTWEDGGAGN TYEIDEPFRSYGSLSDSLADYAALMTSSTYSGTWKSNTSSYADATQALTGTYATDSLYAS KLNSIIAYYGLTIYDQAPVTQKTGSSGGLVWNAYRGSYTDAETLSIDEAWASYKNYK >gi|311101497|gb|AEKO01000005.1| GENE 336 324754 - 325761 881 335 aa, chain + ## HITS:1 COG:SPy1056 KEGG:ns NR:ns ## COG: SPy1056 COG2855 # Protein_GI_number: 15675048 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 21 335 22 339 339 342 64.0 5e-94 MKIKESLPGISISILISLIAWYLGKLFPIIGGPVIGLFIGLLLASLPINQKKFLVGMQFT SKKVLQYAVVLLGFGLNLSQVFNVGLTSLPIILATITTALITAYFIHKLFKLDSEIATLV GVGSSICGGSAIAATAPVIKAKDESIATAISVIFFFNILAALLFPHLGSWLGLSNQGFAI FAGTAVNDTSSVTATASSWDSLHGTSILEQATIVKLTRTLAIIPITLGLSIWQSKKDNTQ ESFSLTKAIPNFILWFLLASLVTTITMSMGVPSAIFNPLKDLSKFMIIMAMTAIGYQTNL KKLITRGGAALLVGGICWLLISVVSLLMQKLLGLW >gi|311101497|gb|AEKO01000005.1| GENE 337 325929 - 326174 238 81 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 34 80 375 421 422 67 78.0 9e-12 MRPIKNPTELIGIKDQNIKILLIFETDTHIEIQAKLEATNKLIKDIKRLGFGFRNFINFK KRVFITLNIHKKRTYPVLSRC >gi|311101497|gb|AEKO01000005.1| GENE 338 326307 - 326633 312 108 aa, chain + ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 108 67 174 196 178 82.0 2e-45 MVALAQPLPEYDILRSIPGIAETTATSIIDKLGDIRRLQSTNQINAFIGIDLRHYESGNF LAKEHITKRGNPYARKILFKCIHNIASASHTNPCHIADFYEKRKDNRQ Prediction of potential genes in microbial genomes Time: Sun May 29 18:27:28 2011 Seq name: gi|311101473|gb|AEKO01000006.1| Streptococcus vestibularis F0396 ctg1126932565717, whole genome shotgun sequence Length of sequence - 25688 bp Number of predicted genes - 21, with homology - 21 Number of transcription units - 10, operones - 4 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 1 - 2460 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - TRNA 2607 - 2679 84.6 # Ala TGC 0 0 - SSU_RRNA 2740 - 4273 99.0 # AY188352 [D:1..1546] # 16S ribosomal RNA # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - Term 4649 - 4683 2.1 1 1 Op 1 6/0.000 - CDS 4684 - 5232 863 ## PROTEIN SUPPORTED gi|228476605|ref|ZP_04061287.1| ribosomal subunit interface protein, ribosomal protein S30AE family 2 1 Op 2 6/0.000 - CDS 5310 - 5972 323 ## COG1040 Predicted amidophosphoribosyltransferases 3 1 Op 3 . - CDS 5953 - 6147 143 ## COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) 4 1 Op 4 . - CDS 6240 - 7271 556 ## COG4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) - Prom 7303 - 7362 8.8 + Prom 7132 - 7191 5.7 5 2 Tu 1 . + CDS 7326 - 7952 605 ## COG1739 Uncharacterized conserved protein + Prom 7965 - 8024 7.8 6 3 Tu 1 . + CDS 8054 - 8980 1220 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 8988 - 9029 6.1 - Term 8969 - 9022 17.1 7 4 Op 1 . - CDS 9145 - 9804 791 ## COG0517 FOG: CBS domain - Prom 9831 - 9890 5.2 8 4 Op 2 18/0.000 - CDS 9939 - 10649 287 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 9 4 Op 3 19/0.000 - CDS 10649 - 11413 294 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 10 4 Op 4 24/0.000 - CDS 11416 - 12366 1029 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 11 4 Op 5 20/0.000 - CDS 12370 - 13254 1043 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 12 4 Op 6 1/0.667 - CDS 13298 - 14473 1570 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 14508 - 14567 9.5 - Term 14562 - 14616 -1.0 13 5 Op 1 3/0.667 - CDS 14629 - 14910 298 ## COG4471 Uncharacterized protein conserved in bacteria 14 5 Op 2 . - CDS 14903 - 15352 304 ## COG3679 Uncharacterized conserved protein - Prom 15376 - 15435 2.9 15 5 Op 3 1/0.667 - CDS 15439 - 16029 809 ## COG0740 Protease subunit of ATP-dependent Clp proteases - Prom 16055 - 16114 7.5 - Term 16176 - 16209 1.1 16 6 Tu 1 . - CDS 16362 - 16841 566 ## COG0035 Uracil phosphoribosyltransferase - Prom 16867 - 16926 6.3 - Term 16976 - 17014 -0.9 17 7 Op 1 2/0.667 - CDS 17044 - 18207 1117 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 18 7 Op 2 . - CDS 18218 - 19312 1259 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 19534 - 19593 5.1 - Term 19516 - 19557 5.2 19 8 Tu 1 . - CDS 19606 - 22386 2361 ## COG0474 Cation transport ATPase - Prom 22431 - 22490 7.2 - Term 22460 - 22497 4.8 20 9 Tu 1 . - CDS 22503 - 24077 1445 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - Prom 24164 - 24223 8.5 + Prom 24128 - 24187 5.6 21 10 Tu 1 . + CDS 24229 - 25674 1504 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase Predicted protein(s) >gi|311101473|gb|AEKO01000006.1| GENE 1 4684 - 5232 863 182 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228476605|ref|ZP_04061287.1| ribosomal subunit interface protein, ribosomal protein S30AE family [Streptococcus salivarius SK126] # 1 182 1 182 182 337 93 6e-92 MIKYSIRGENIEVTEALRDYVESKLSKVEKYFNEDQELHARVNLKVYREKTAKVEVTIPT GSVTLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHREKVSRGEVFSAEFTKEEIE EAPTVEVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSKDHMTNVLYKREDGNYGLIE AK >gi|311101473|gb|AEKO01000006.1| GENE 2 5310 - 5972 323 220 aa, chain - ## HITS:1 COG:SP2207 KEGG:ns NR:ns ## COG: SP2207 COG1040 # Protein_GI_number: 15902014 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 220 1 220 220 189 43.0 4e-48 MKCLLCNEWIESVAQLSDLIMFKQRREYSCEDCKGQFKKLGKARCSNCYKIIDGNSCIDC KIWAKKGYIPKHFAIYCYEENMKEYFSRYKFMGDYCLRKIFQQEIKANLKPFLKKGYILV PVPLSEERLEDRGFNQVKGLLEGIPYKNIFEKRDIEKQSSRTREERLSQDNPFSLKKGIE LPSKIIIVDDIYTTGSTLYQMVKLLDDLDVKEVLTFSLAR >gi|311101473|gb|AEKO01000006.1| GENE 3 5953 - 6147 143 64 aa, chain - ## HITS:1 COG:SPy1616 KEGG:ns NR:ns ## COG: SPy1616 COG4098 # Protein_GI_number: 15675494 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) # Organism: Streptococcus pyogenes M1 GAS # 2 64 377 438 441 82 60.0 2e-16 MANHHLYTSSSLIQIGGRVGRSPERPTGKLYFFHEGLSKSMLQCRKEINAMNKKGGFENE VSTM >gi|311101473|gb|AEKO01000006.1| GENE 4 6240 - 7271 556 343 aa, chain - ## HITS:1 COG:SP2208 KEGG:ns NR:ns ## COG: SP2208 COG4098 # Protein_GI_number: 15902015 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) # Organism: Streptococcus pneumoniae TIGR4 # 5 322 6 322 432 336 53.0 5e-92 MIPKEYYGRLFTKAQLPVDYLSEAVKLESMIKVDKKLRCKRCYSQIEEDWQLPNGQYYCR ACIVFGRNQEGKELYYFPSEKSEVDFPVLKWLGKLTPYQNEVSEKLLKTYKNQKHSLVHA VTGAGKTEMIYKIVAYVLENKNRVAIASPRVDVCRELFLRMQKDFTCSISLLHADSEPYD GSPLVIATTHQLLKFYHSFDLIIVDEVDAFPFVGNVMLNHAVKQAKTETGRYIYLTATST LALEEQVRLGALEKHHLARRFHGNPLVLPRFFWQGRLQKSLTNGKLPSLLIHQIKKQRKS NFPLLIFFPNIAVGEKFSITLKNTSLLKTYPLFHQKARSVQPS >gi|311101473|gb|AEKO01000006.1| GENE 5 7326 - 7952 605 208 aa, chain + ## HITS:1 COG:SP2209 KEGG:ns NR:ns ## COG: SP2209 COG1739 # Protein_GI_number: 15902016 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 208 1 208 211 243 59.0 1e-64 MDYKTIANDRIVEEEIKKSRFICHLKRISNEEEGREYIAQIKKKHHKANHSCSAMIVGDD GQIKRSSDDGEPSGTAGVPMLTVLEKQGLTNVVAVVTRYFGGIKLGAGGLIRAYSGSVAH AIEEIGRVEIKELAGLIVNLTYSQYQVFSNFLEKEGLQEFDTTFLSEVSTTLFVEESEIE RLGQELTEFYQGKVNYEKSGKKIVEIPV >gi|311101473|gb|AEKO01000006.1| GENE 6 8054 - 8980 1220 308 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 307 1 307 308 474 74 1e-133 MAIYNSITELVGKTPVIKLNSIVPEGSADVYVKLEAFNPGSSVKDRIALRMIEDAEKAGT IKPGNTIIEPTSGNTGIGLAWVGAAKGYKVVIVMPDTMSVERRKIIQAYGAELVLTPGSE GMKGAIAKAKEVAAERNGWVPLQFANPSNPAAHAATTGQEILEDFGADGLDAFVAGIGTG GTISGVSKTLKAANPNIKVYGIEADESAVLNGDKPGPHKIQGISTGFIPDTLDTKSYDSV VRIPSDEAISTSRTLGSKEGFLAGISSGAAIAAALKVAAELGEGKKVLTLLPDNGERYLS TTLYDFQN >gi|311101473|gb|AEKO01000006.1| GENE 7 9145 - 9804 791 219 aa, chain - ## HITS:1 COG:SP0754 KEGG:ns NR:ns ## COG: SP0754 COG0517 # Protein_GI_number: 15900649 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Streptococcus pneumoniae TIGR4 # 1 218 1 218 218 247 61.0 2e-65 MAVKDFMTKRVVYVSPETTVAAATDIMRDKGLRRLPVIEHDKLVGLITEGTIAEASPSKA TSLSIYEMNYLLNKTKVGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDNDQISGI ITDKDVFRAFLEISGYGQAGIRIGLEVLDTPRILEKIANLISSENLNIERTIVAPKTDTV LRVELQVEGDVEPEYLKKVFVEAGFTVVEIAETEAKELD >gi|311101473|gb|AEKO01000006.1| GENE 8 9939 - 10649 287 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 223 1 226 245 115 28 4e-25 MAMLKVENLSIKYGSIEAVKNVSFEVNEGEVVTLIGANGAGKTSILRTISGLVRPTEGII SYLGNDIHKTPARKIVAEGLAQVPEGRHVFAGLTVMENLEMGAFLHKNKEENTTLLKKVF QRFPRLEERKNQDAATLSGGEQQMLAMGRALMSRPKLLLLDEPSMGLAPIFIQEIFDIIE DIKAQGTTVLLIEQNANKALSIADRGYVLETGKVVLSGTGKELLASDEVRKAYLGG >gi|311101473|gb|AEKO01000006.1| GENE 9 10649 - 11413 294 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 242 1 229 245 117 26 6e-26 MALLEVKNLTKNFGGLTAVGDVSMELNEGELVGLIGPNGAGKTTLFNLLTGVYEPSEGTV TLDGTVLNGKAPYKIASLGLSRTFQNIRLFKDMTVLENVLVGLSNKQPSNFFASLLRLPK YYSSEDELKDKAMKLLAIFNLDDEADTLAKNLAYGQQRHLEIVRALATEPKILFLDEPAA GMNPQETAELTAHIRQIQKDFGITIILIEHDMSLVMDVTERIYVLEYGRLIAEGTPDEIK NNKRVIEAYLGGEA >gi|311101473|gb|AEKO01000006.1| GENE 10 11416 - 12366 1029 316 aa, chain - ## HITS:1 COG:SP0751 KEGG:ns NR:ns ## COG: SP0751 COG4177 # Protein_GI_number: 15900646 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 314 1 314 318 303 62.0 3e-82 MKKNLKVNLIWFGLIIGLFLILKGLELSGIMNLYYIQILMGIGISILMGLGTNLVLGFSG QFTLGQAGFMAIGAYSSAIITGMMPTYGGFYLSMVVGVIIAAVVALIFGIPTLRLKGDYL AIATLGMAEIIRIIIVNGGELTNGAAGLTGILPYTSWPVIYFFVVIITILVLNFLRSATG RQAITLREDEIAAESMGVNVTKMKVIIFVIGAMISAIAGSLYVSYIGTVVPKDFTIMKSI DYLIIAVLGGLGSITGTIIAAVVLGIINMFLQNVSNLRMIIYALALILVMLFRPGGLLGT KELYLSKFFNKSKEGK >gi|311101473|gb|AEKO01000006.1| GENE 11 12370 - 13254 1043 294 aa, chain - ## HITS:1 COG:SP0750 KEGG:ns NR:ns ## COG: SP0750 COG0559 # Protein_GI_number: 15900645 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Streptococcus pneumoniae TIGR4 # 8 294 3 289 289 355 79.0 4e-98 MFFEQLPQQLVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMMGAFVGYYAINSLK MNFWIALVFSMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADT RSFPQSIKMHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSDAA ELMGINVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLMGMTPGIKAFVAAVLGGIGII PGAALGGFVIGILETLSTAIGLSSYRDAIVYGVLIVILLLRPAGILGKNVKEKV >gi|311101473|gb|AEKO01000006.1| GENE 12 13298 - 14473 1570 391 aa, chain - ## HITS:1 COG:SP0749 KEGG:ns NR:ns ## COG: SP0749 COG0683 # Protein_GI_number: 15900644 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 388 1 385 386 345 53.0 6e-95 MSKKITLIVLAFFASIFLVACGKSPDVTANAKGTKIGDTIKIGVNMELTGAVAAYGKAEQ NGIKLAVDEINKAGGVDGKKLELVTKDNKSENAEASTSSTNLAIQSNVNAIVGPATSGAV AAASLVSQKTGVPLLTPSGTQDDLTVDTNGAKKFVFRTTFKDSYQGKVLAAYSYSNLNAK KVVLYYDNASDYAKGIADEFKREYKGQIVTEATFASGDKDYQSALTKFKDLDYDAIVMPG YYTETGIITKQARDLGIDKPILGPDGFSDAKFTELAGKKNASNVYYVSGYSTNVALSDKA SGFIEAYKKAYNTEPNMFAALAYDSVYMIAEASKDAKTSVDIADNLAHLKNFVGVTGKMT IDKDHNPIKAALMVKRDNGEEVSAEAVEIEK >gi|311101473|gb|AEKO01000006.1| GENE 13 14629 - 14910 298 93 aa, chain - ## HITS:1 COG:SPy0397 KEGG:ns NR:ns ## COG: SPy0397 COG4471 # Protein_GI_number: 15674538 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 3 83 6 86 91 75 46.0 3e-14 MIKRQGIIVYLYYNRDLRKIAKFGDVIYHSYKMRYVHLYVDQDRVKDILTELEGMKAVKK VLPSYYSDIDMDFVGSLERYDTSVPEHFKNFSL >gi|311101473|gb|AEKO01000006.1| GENE 14 14903 - 15352 304 149 aa, chain - ## HITS:1 COG:L162952 KEGG:ns NR:ns ## COG: L162952 COG3679 # Protein_GI_number: 15672339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 137 1 125 126 70 37.0 1e-12 MLIINEELLAIDQAIDSLVLHFLRLPEVENYRLKRQKLENTRELQELLLEFQELKESYDK AKEYESFRPDVRDLKRQVLRMKRQIDLNEVVIGYRQAEFDLQIILASLGEEVAQAISNQI FIDTRLPLAPHKPHHKKGDTNIKEKMSHD >gi|311101473|gb|AEKO01000006.1| GENE 15 15439 - 16029 809 196 aa, chain - ## HITS:1 COG:SP0746 KEGG:ns NR:ns ## COG: SP0746 COG0740 # Protein_GI_number: 15900641 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Streptococcus pneumoniae TIGR4 # 1 195 1 195 196 328 93.0 4e-90 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMI HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQSIEKVHVDAERDNWMSAQET LEYGFIDEIMTNNQLK >gi|311101473|gb|AEKO01000006.1| GENE 16 16362 - 16841 566 159 aa, chain - ## HITS:1 COG:SPy0392 KEGG:ns NR:ns ## COG: SPy0392 COG0035 # Protein_GI_number: 15674535 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 148 1 148 209 261 91.0 3e-70 MGKFQVISHPLIQHKLSILRREDTSTKDFRELVDEIAMLMGYEVSRDLPLEEVEIQTPIT KTVQKQLSGKKLAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRDEETLEPVEYLVKLPE DIDQRQIFVVDPMLATGGSAILAVDSLKNVEQLISSLYV >gi|311101473|gb|AEKO01000006.1| GENE 17 17044 - 18207 1117 387 aa, chain - ## HITS:1 COG:SP1524 KEGG:ns NR:ns ## COG: SP1524 COG1168 # Protein_GI_number: 15901370 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Streptococcus pneumoniae TIGR4 # 1 386 1 386 388 492 60.0 1e-139 MTRYDFTTQPDRLNQNTMKWHEAESDPELLELWVADMDFLPVPEIRDAVINYAETHIFGY PYPSDELYQSIIDWEKNQHGYVVDKESIVLIEGVVPAISTAIQAFTKEGDAVLINTPVYP PFARSVRLNNRKLIENSLVKVNGHFEIDFEQLERDIVDNDVKLYVFCSPHNPGGRVWTKE ELTKVADLCQKHGVLLVSDEIHQDLALYGNKHISLNTISDAYKDFTLVLSSATKTFNIAG TKNSFTIIENEDLRKSFKQKQLANNQHEIPTIGLITTQAAFTYGQPWLEELKTVFETNID LLTKELSEKTNIKVMKPEGTYLVWLDFSAYNQDHNELGRLLKEEAKVVLNDGITFGSEGE KHFRFNVATPTKVVAEGVKRLVSVFGN >gi|311101473|gb|AEKO01000006.1| GENE 18 18218 - 19312 1259 364 aa, chain - ## HITS:1 COG:SP1525 KEGG:ns NR:ns ## COG: SP1525 COG0626 # Protein_GI_number: 15901371 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Streptococcus pneumoniae TIGR4 # 1 362 1 362 364 561 77.0 1e-160 MTQEYQLETILAHAGINSDEATGALASPIHFSTTYQHPEFGHSTGFDYTRTKNPTRATVE KTLAAIEKADYAIATSSGMSAIVLAFEIFPVGSKVVAARDLYGGSFRWFNDKEKEGRFFF EYTNTEDEMIAAITDDTDIVYIETPTNPLMIEFDIEKVAKIAHDKGAVVIVDNTFYSPIY QTPITQGADIVVHSATKYLSGHNDVLAGVVVTSNQEFYDKLYYNLNTTGPTLSPFDSYML MRGLKTLKLRMEASTANAQEVVAFLEKSPAVKEVLYPGKGGMISFKVADQDKIPTIINSL KVFTFAESLGGVESLITYPTTQTHADIPSDVRASYGLTDDLLRLSIGIEAAQDLIVDLEN ALSL >gi|311101473|gb|AEKO01000006.1| GENE 19 19606 - 22386 2361 926 aa, chain - ## HITS:1 COG:MTH1516 KEGG:ns NR:ns ## COG: MTH1516 COG0474 # Protein_GI_number: 15679513 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanothermobacter thermautotrophicus # 17 919 14 902 910 737 45.0 0 MSNSRQKGTKLGTCAPDQVYQVLQTSPQGLNSQEVKKRQATYGPNQLKESKKEPIWLTFF RHFTSLMALLLWVGGFIAMLSHSLELGIAIWLVNIINGLFSFIQEYRASQATAALNKLLP SYTRVLRDGKEDKILAQDLVPGDLVFIEEGDSISADGRLIDVTDLRVNQSALTGESNPIY KSNQADLDPEKAELEYDNMVFAGTTVSSGSGHFIVSAIGMKTEFGQIADLTQNFAQGKSP LQKELDHLTKQISVIAVSVGLFFMVAATLFVHQPLSQAFIFALGMIVAFIPEGLLPTVTL SLAMAVQRMAKDHALVKKLSSVETLGATSVICSDKTGTLTQNAMTVNHLWTLSGNYEVTG LGYAPEGHIEKEGQSVPLKDNNLLNRLVRFSHLASNAQVVSPSADSPNYTVLGDPTEACL NVLAEKAGINLNENHIWAPRIKEIPFDSDRKRMTTVHSLEKSLDGSHHISITKGAPKEVM ELCSDYSDGQGAIKSMTTTERQAILAANDQFARDGLRVLAVAYRPLESEHIGEDKWNMQT LEDNMVFLGLVAMSDPPRQGVREAIEKCHRASIRIIMVTGDYGLTALSIAKKIGIVQGDD ARVVSGLELAGMDDDQLKEVLKGEVVFARVAPEQKYRVVNALQELGEVVAVTGDGVNDAP ALKKADIGVAMGISGTDVAKESADMILTDDHFASIVHAVEEGRAVYRNIQKFLTYIFNSN TPEAVPSAFFLFSLGRIPLPLTVMQILAIDLGTDMVPALGLGVEPPEEGVMDRPPRRLSD RLLNRQLLIKAFVWYGLIEAALAMGAFFLNYWANQGNLNHLASSGPLYREATTMTLGAII FTQIGMAMNSRKGRGSIFQIKPFANRIISLGIVLEIVLFIILSYVPLFHMLFNTAPIGLD DWLYLLACPFVIMALEEIRYRLFDKK >gi|311101473|gb|AEKO01000006.1| GENE 20 22503 - 24077 1445 524 aa, chain - ## HITS:1 COG:SPy0390 KEGG:ns NR:ns ## COG: SPy0390 COG2244 # Protein_GI_number: 15674534 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Streptococcus pyogenes M1 GAS # 2 521 22 541 544 530 60.0 1e-150 MTASNIISRLLGALYIIPWYAWMGKQGDQANALFGQGYNIYALFLLISTAGIPVAIAKQV SKYNTLGKMETSFFLLKRILYYMIGLGLIFGIFMYFASPWMSYLSGGDEDLVRVMRSLSW AVVIFPSMSVLRGFFQGFNNMKPYALSQIAEQIIRVIWMLLATFFIMKIGTGDYVTAVVQ STFAAFIGMLASYGVLFFYLWKEGKLKSLFGKQAVHPDINPTAIVIETFKEAIPFIITGS AVQLFQLIDQWTFIRTMEKFTSYSNSQLQVLYAYLSSNPSKITMILIAVAISIAGVGIPL LTENMVKKDLWGAAKLIINNLQLLLLFIVPAIAGSVILAKPLYTVFYGAPDSQAHLLFVA SLIQVIFLALYSVLAPMLQAIFETRKAINYFAIGVLVKAILQLPLIIFLGALGPVISTAI GLGVPIALMYKRLHTVTHFSRKTVFRKALLICILTMLMAIPVAVFYWLFQFVLSPTSRMG SVIHLVIGGGLGVLVYGVLALVTRMADQLLGARAASLRAKLHIK >gi|311101473|gb|AEKO01000006.1| GENE 21 24229 - 25674 1504 481 aa, chain + ## HITS:1 COG:SPy0388 KEGG:ns NR:ns ## COG: SPy0388 COG0769 # Protein_GI_number: 15674533 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 1 481 1 481 481 696 70.0 0 MITIEQVLEVLKKDHNFRDIIDQDNYYYSWTGVTFDHLSYDSRDVTPSSLFFAKGAAFKP EFLENAVQAGLSFYVAEKDYQVGIPAIIVSDIKQAMSLVAQAFYQYPQDKLKLLAFTGTK GKTTAAYFAFNILKQSHKPAMLSTMNTTLDGKNFFKSNLTTPESLDLFRMMAEAVDNGMT HLIMEVSSQAYLTKRVYGLIFDVGVFLNISPDHIGPIEHPTFEDYFYHKRLLLENSRAVI VNSGMNHFGFVAEEVADKDHDFYGKDSENTVKHSSGFSFKAKGKLAGDYDIQLIGDFNQD NAMAAGLSCLRLGASLEDIKQGIAQTSVPGRMEILTQANGAKVFVDYAHNGDSLDKLLQV VTDHQKGKISLILGAPGNKGESRRKDFGHVLNTYPEVDVTLSADDPNKEDPLAICQEIAS HISRKVRIIVDREEAIKTAMAETTDSEDAVVIAGKGADAFQIVNGKRTDYAGDIEVAKKY L Prediction of potential genes in microbial genomes Time: Sun May 29 18:33:30 2011 Seq name: gi|311100538|gb|AEKO01000007.1| Streptococcus vestibularis F0396 ctg1126932565723, whole genome shotgun sequence Length of sequence - 942840 bp Number of predicted genes - 936, with homology - 895 Number of transcription units - 470, operones - 243 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 2870 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + 5S_RRNA 2954 - 3069 99.0 # S43413 [D:98..213] # # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 3075 - 3148 76.4 # Asn GTT 0 0 + Prom 3097 - 3156 57.5 1 1 Tu 1 . + CDS 3258 - 3593 366 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 3606 - 3650 -0.5 2 2 Tu 1 . - CDS 4029 - 4277 97 ## gi|228477986|ref|ZP_04062597.1| putative transposase - Term 4761 - 4789 1.4 3 3 Tu 1 2/0.146 - CDS 4879 - 5154 70 ## COG3666 Transposase and inactivated derivatives 4 4 Tu 1 . - CDS 5263 - 5550 108 ## COG3666 Transposase and inactivated derivatives - Prom 5596 - 5655 7.1 - Term 5577 - 5626 11.4 5 5 Tu 1 . - CDS 5661 - 6443 641 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 6471 - 6530 9.6 + Prom 6427 - 6486 6.6 6 6 Op 1 . + CDS 6639 - 6953 414 ## COG0526 Thiol-disulfide isomerase and thioredoxins 7 6 Op 2 . + CDS 7014 - 7445 345 ## COG1832 Predicted CoA-binding protein + Term 7452 - 7496 5.1 8 7 Op 1 3/0.031 + CDS 7499 - 8275 643 ## COG0084 Mg-dependent DNase 9 7 Op 2 7/0.000 + CDS 8268 - 8828 423 ## COG1658 Small primase-like proteins (Toprim domain) + Term 8834 - 8878 0.8 + Prom 8848 - 8907 6.5 10 7 Op 3 2/0.146 + CDS 8972 - 9844 921 ## COG0030 Dimethyladenosine transferase (rRNA methylation) + Term 9853 - 9886 5.1 - TRNA 9883 - 9966 50.9 # Leu CAG 0 0 + Prom 10010 - 10069 3.7 11 8 Op 1 10/0.000 + CDS 10102 - 10974 551 ## COG1162 Predicted GTPases 12 8 Op 2 6/0.000 + CDS 10982 - 11641 1059 ## COG0036 Pentose-5-phosphate-3-epimerase 13 8 Op 3 2/0.146 + CDS 11634 - 12266 339 ## COG1564 Thiamine pyrophosphokinase 14 8 Op 4 3/0.031 + CDS 12268 - 13542 1034 ## COG1322 Uncharacterized protein conserved in bacteria 15 8 Op 5 2/0.146 + CDS 13532 - 14473 965 ## COG3481 Predicted HD-superfamily hydrolase + Term 14486 - 14524 3.2 + Prom 14483 - 14542 7.7 16 9 Tu 1 . + CDS 14567 - 15391 830 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 15395 - 15435 1.9 + Prom 15424 - 15483 8.6 17 10 Op 1 56/0.000 + CDS 15610 - 16023 695 ## PROTEIN SUPPORTED gi|55821763|ref|YP_140205.1| 30S ribosomal protein S12 18 10 Op 2 51/0.000 + CDS 16042 - 16512 794 ## PROTEIN SUPPORTED gi|228477302|ref|ZP_04061940.1| ribosomal protein S7 + Term 16631 - 16687 9.1 + Prom 16633 - 16692 10.4 19 11 Op 1 1/0.344 + CDS 16725 - 18806 2434 ## COG0480 Translation elongation factors (GTPases) + Term 18826 - 18861 1.0 + Prom 18833 - 18892 6.5 20 11 Op 2 . + CDS 18994 - 20007 1267 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 20024 - 20053 -0.2 21 12 Tu 1 . - CDS 20246 - 20614 65 ## Pmob_0418 hypothetical protein + Prom 20878 - 20937 6.3 22 13 Tu 1 . + CDS 20965 - 22164 1692 ## COG0126 3-phosphoglycerate kinase + Prom 22210 - 22269 12.0 23 14 Tu 1 . + CDS 22317 - 22820 377 ## COG4129 Predicted membrane protein + Prom 22833 - 22892 8.3 24 15 Op 1 5/0.010 + CDS 22994 - 23368 485 ## COG0789 Predicted transcriptional regulators 25 15 Op 2 . + CDS 23416 - 24759 1624 ## COG0174 Glutamine synthetase + Term 24771 - 24806 3.5 + Prom 24865 - 24924 9.2 26 16 Tu 1 . + CDS 25087 - 25353 64 ## + Term 25373 - 25426 5.3 - Term 25329 - 25360 1.0 27 17 Op 1 7/0.000 - CDS 25365 - 27047 2177 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 28 17 Op 2 . - CDS 27052 - 27282 361 ## COG5503 Uncharacterized conserved small protein - Prom 27306 - 27365 6.5 + Prom 27459 - 27518 5.8 29 18 Op 1 20/0.000 + CDS 27543 - 28229 277 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 30 18 Op 2 9/0.000 + CDS 28189 - 28644 315 ## PROTEIN SUPPORTED gi|15902174|ref|NP_357724.1| ribosomal protein alanine acetyltransferase 31 18 Op 3 . + CDS 28644 - 29657 729 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase + Term 29664 - 29698 2.9 32 19 Op 1 9/0.000 + CDS 29709 - 30401 714 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 33 19 Op 2 . + CDS 30388 - 30714 395 ## COG4392 Predicted membrane protein + Term 30720 - 30765 7.3 - Term 30707 - 30753 9.1 34 20 Op 1 2/0.146 - CDS 30754 - 33258 2463 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member - Term 33268 - 33303 5.1 35 20 Op 2 3/0.031 - CDS 33319 - 33960 758 ## COG0681 Signal peptidase I 36 20 Op 3 . - CDS 33979 - 34869 866 ## COG1039 Ribonuclease HIII - Prom 34902 - 34961 8.0 37 21 Op 1 . + CDS 35259 - 35498 292 ## str1764 hypothetical protein 38 21 Op 2 . + CDS 35495 - 36037 418 ## COG1286 Uncharacterized membrane protein, required for colicin V production + Term 36044 - 36082 1.4 + Prom 36051 - 36110 3.6 39 22 Op 1 . + CDS 36149 - 36364 168 ## gi|228477986|ref|ZP_04062597.1| putative transposase 40 22 Op 2 42/0.000 + CDS 36410 - 37132 212 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 41 22 Op 3 12/0.000 + CDS 37129 - 37962 584 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 42 22 Op 4 . + CDS 37983 - 38915 939 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 43 22 Op 5 . + CDS 38970 - 39143 100 ## COG2077 Peroxiredoxin + Prom 39195 - 39254 3.4 44 23 Tu 1 . + CDS 39301 - 39492 135 ## COG2077 Peroxiredoxin + Term 39494 - 39534 4.6 + Prom 39902 - 39961 8.9 45 24 Tu 1 . + CDS 40043 - 40693 411 ## COG1321 Mn-dependent transcriptional regulator + Term 40717 - 40755 8.6 - Term 41036 - 41074 2.4 46 25 Op 1 . - CDS 41285 - 41512 304 ## - Term 41530 - 41567 1.2 47 25 Op 2 . - CDS 41580 - 43928 2595 ## COG1193 Mismatch repair ATPase (MutS family) - Prom 44019 - 44078 3.4 + Prom 43864 - 43923 5.9 48 26 Tu 1 . + CDS 44103 - 46742 3118 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 46869 - 46907 -0.8 49 27 Tu 1 . - CDS 47048 - 48199 546 ## PROTEIN SUPPORTED gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase - Prom 48274 - 48333 6.4 50 28 Tu 1 . - CDS 48710 - 49075 127 ## - Prom 49177 - 49236 5.0 - Term 49320 - 49369 4.1 51 29 Tu 1 . - CDS 49395 - 50348 674 ## STER_1729 hypothetical protein - Prom 50517 - 50576 4.0 + Prom 50422 - 50481 6.5 52 30 Op 1 24/0.000 + CDS 50504 - 50842 541 ## PROTEIN SUPPORTED gi|55737711|gb|AAV61353.1| 30S ribosomal protein S6 53 30 Op 2 21/0.000 + CDS 50854 - 51372 759 ## COG0629 Single-stranded DNA-binding protein 54 30 Op 3 . + CDS 51414 - 51653 395 ## PROTEIN SUPPORTED gi|22537851|ref|NP_688702.1| 30S ribosomal protein S18 + Term 51660 - 51689 1.4 - Term 51636 - 51689 7.2 55 31 Tu 1 . - CDS 51768 - 52658 599 ## STER_1725 hypothetical protein - Prom 52684 - 52743 5.8 - Term 52730 - 52758 1.0 56 32 Op 1 2/0.146 - CDS 52775 - 53446 603 ## COG4858 Uncharacterized membrane-bound protein conserved in bacteria 57 32 Op 2 . - CDS 53479 - 54357 616 ## COG0598 Mg2+ and Co2+ transporters - Prom 54495 - 54554 6.7 + Prom 54604 - 54663 6.8 58 33 Op 1 . + CDS 54754 - 57579 3164 ## COG0178 Excinuclease ATPase subunit + Term 57581 - 57619 1.8 + Prom 57589 - 57648 2.9 59 33 Op 2 . + CDS 57674 - 57916 189 ## str1747 hypothetical protein + Term 57940 - 57974 1.1 + Prom 57936 - 57995 4.5 60 34 Op 1 . + CDS 58090 - 58239 93 ## gi|228477314|ref|ZP_04061952.1| hypothetical protein STRSA0001_0339 61 34 Op 2 . + CDS 58276 - 58476 128 ## gi|228477019|ref|ZP_04061657.1| hypothetical protein STRSA0001_0338 + Term 58504 - 58538 -0.9 + Prom 58510 - 58569 6.9 62 35 Op 1 . + CDS 58679 - 58813 93 ## 63 35 Op 2 . + CDS 58851 - 59000 188 ## 64 35 Op 3 . + CDS 59007 - 59165 84 ## str1746 hypothetical protein + Term 59225 - 59272 -0.3 + Prom 59176 - 59235 4.5 65 36 Op 1 . + CDS 59303 - 60124 761 ## COG1131 ABC-type multidrug transport system, ATPase component 66 36 Op 2 . + CDS 60114 - 60836 555 ## str1743 hypothetical protein + Prom 60886 - 60945 5.5 67 37 Op 1 1/0.344 + CDS 60968 - 62029 1455 ## COG0006 Xaa-Pro aminopeptidase 68 37 Op 2 1/0.344 + CDS 62048 - 62503 569 ## COG2131 Deoxycytidylate deaminase + Prom 62527 - 62586 4.8 69 38 Op 1 4/0.021 + CDS 62616 - 63176 781 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Term 63189 - 63225 5.0 70 38 Op 2 10/0.000 + CDS 63247 - 63636 567 ## COG1302 Uncharacterized protein conserved in bacteria 71 38 Op 3 . + CDS 63629 - 64063 610 ## COG0781 Transcription termination factor + Term 64064 - 64110 4.0 - Term 64109 - 64146 1.0 72 39 Op 1 5/0.010 - CDS 64153 - 65118 704 ## COG1609 Transcriptional regulators 73 39 Op 2 . - CDS 65127 - 66569 1535 ## COG1621 Beta-fructosidases (levanase/invertase) - Prom 66650 - 66709 7.7 + Prom 66643 - 66702 7.5 74 40 Tu 1 . + CDS 66757 - 68658 2297 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 68661 - 68711 11.1 + Prom 68741 - 68800 8.3 75 41 Op 1 3/0.031 + CDS 68842 - 69735 1186 ## COG1940 Transcriptional regulator/sugar kinase + Term 69752 - 69788 5.1 76 41 Op 2 . + CDS 69828 - 70748 917 ## COG1482 Phosphomannose isomerase 77 41 Op 3 . + CDS 70751 - 71095 295 ## str1731 hypothetical protein + Term 71168 - 71203 0.2 + Prom 71130 - 71189 6.8 78 42 Op 1 2/0.146 + CDS 71278 - 73827 2925 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 79 42 Op 2 1/0.344 + CDS 73851 - 74882 1289 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 74906 - 74955 15.2 80 43 Op 1 1/0.344 + CDS 74967 - 75998 1202 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 81 43 Op 2 5/0.010 + CDS 76001 - 76354 274 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 82 43 Op 3 1/0.344 + CDS 76382 - 77485 1126 ## COG0787 Alanine racemase + Term 77496 - 77537 2.4 + Prom 77506 - 77565 7.4 83 44 Tu 1 . + CDS 77616 - 79634 1665 ## COG1200 RecG-like helicase + Term 79764 - 79797 2.3 84 45 Op 1 . + CDS 80402 - 81010 571 ## STER_1696 hypothetical protein 85 45 Op 2 . + CDS 81016 - 81231 226 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 - Term 81222 - 81277 8.1 86 46 Op 1 . - CDS 81282 - 81425 114 ## STER_1691 hypothetical protein 87 46 Op 2 . - CDS 81429 - 82397 1103 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Prom 82379 - 82438 11.5 88 47 Tu 1 . + CDS 82469 - 83854 1566 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 83866 - 83901 5.4 + Prom 83886 - 83945 8.9 89 48 Tu 1 . + CDS 83972 - 85117 1456 ## str1721 hypothetical protein + Prom 85198 - 85257 2.2 90 49 Op 1 . + CDS 85290 - 85664 236 ## gi|228477297|ref|ZP_04061935.1| conserved hypothetical protein 91 49 Op 2 . + CDS 85640 - 85861 167 ## STER_1685 hypothetical protein 92 49 Op 3 . + CDS 85890 - 86876 968 ## SMU.502 hypothetical protein + Term 86948 - 86985 3.0 + Prom 87005 - 87064 7.4 93 50 Op 1 . + CDS 87089 - 87535 370 ## COG3279 Response regulator of the LytR/AlgR family 94 50 Op 2 . + CDS 87540 - 88220 516 ## STER_1683 hypothetical protein 95 51 Tu 1 . + CDS 88622 - 88939 235 ## gi|228476979|ref|ZP_04061617.1| putative membrane protein + Term 88947 - 88982 5.3 + Prom 89048 - 89107 6.2 96 52 Op 1 8/0.000 + CDS 89189 - 92509 3037 ## COG3857 ATP-dependent nuclease, subunit B 97 52 Op 2 . + CDS 92499 - 96152 4217 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) + Term 96166 - 96199 -0.2 - Term 96017 - 96071 -0.8 98 53 Tu 1 . - CDS 96219 - 97475 504 ## COG3464 Transposase and inactivated derivatives + Prom 98068 - 98127 3.6 99 54 Op 1 . + CDS 98157 - 99101 168 ## COG2378 Predicted transcriptional regulator 100 54 Op 2 . + CDS 99165 - 99779 191 ## COG4832 Uncharacterized conserved protein + Term 99956 - 100009 1.4 - Term 99949 - 99990 3.0 101 55 Tu 1 . - CDS 100013 - 100744 658 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump - Prom 100933 - 100992 10.2 + Prom 100812 - 100871 6.9 102 56 Op 1 . + CDS 101012 - 101743 249 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 103 56 Op 2 . + CDS 101746 - 103335 1173 ## STER_1677 ABC transporter, permease protein + Term 103351 - 103386 4.2 + Prom 103376 - 103435 8.5 104 57 Op 1 22/0.000 + CDS 103456 - 104259 847 ## COG0263 Glutamate 5-kinase 105 57 Op 2 . + CDS 104261 - 105511 1308 ## COG0014 Gamma-glutamyl phosphate reductase 106 57 Op 3 . + CDS 105541 - 105939 343 ## COG3152 Predicted membrane protein + Term 105950 - 105980 2.0 + Prom 105974 - 106033 5.4 107 58 Op 1 . + CDS 106077 - 106508 382 ## str1707 hypothetical protein + Prom 106562 - 106621 2.5 108 58 Op 2 . + CDS 106702 - 107550 834 ## stu1704 hypothetical protein + Term 107580 - 107610 3.4 + Prom 107583 - 107642 1.6 109 59 Op 1 7/0.000 + CDS 107665 - 108615 1095 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 110 59 Op 2 7/0.000 + CDS 108618 - 108938 508 ## COG4839 Protein required for the initiation of cell division 111 59 Op 3 4/0.021 + CDS 108942 - 111209 2440 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 112 59 Op 4 1/0.344 + CDS 111211 - 112233 1194 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase + Term 112236 - 112271 3.7 113 59 Op 5 . + CDS 112306 - 113649 1739 ## COG0513 Superfamily II DNA and RNA helicases + Term 113690 - 113738 4.1 + Prom 114100 - 114159 7.7 114 60 Op 1 13/0.000 + CDS 114197 - 114682 388 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 115 60 Op 2 13/0.000 + CDS 114692 - 115483 724 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 116 60 Op 3 4/0.021 + CDS 115476 - 116309 711 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 117 60 Op 4 . + CDS 116358 - 116774 437 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 118 60 Op 5 3/0.031 + CDS 116764 - 118464 777 ## COG0366 Glycosidases 119 60 Op 6 . + CDS 118492 - 119478 519 ## COG1609 Transcriptional regulators + Term 119520 - 119549 -0.2 + Prom 119481 - 119540 2.2 120 61 Tu 1 . + CDS 119575 - 119856 103 ## SMU.423 hypothetical protein + Term 119941 - 119983 -0.9 + Prom 120043 - 120102 6.7 121 62 Op 1 2/0.146 + CDS 120139 - 121494 1239 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 122 62 Op 2 3/0.031 + CDS 121549 - 122286 620 ## COG4470 Uncharacterized protein conserved in bacteria 123 62 Op 3 1/0.344 + CDS 122274 - 123443 1587 ## COG0820 Predicted Fe-S-cluster redox enzyme 124 62 Op 4 . + CDS 123445 - 123972 507 ## COG4767 Glycopeptide antibiotics resistance protein + Term 123977 - 124011 1.7 125 63 Tu 1 . + CDS 124049 - 124351 292 ## STER_1658 hypothetical protein + Prom 124369 - 124428 3.5 126 64 Op 1 35/0.000 + CDS 124451 - 126208 215 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 127 64 Op 2 . + CDS 126201 - 127946 215 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Term 127993 - 128044 9.2 + Prom 127998 - 128057 3.0 128 65 Op 1 . + CDS 128106 - 128285 212 ## 129 65 Op 2 . + CDS 128301 - 128468 85 ## + Term 128506 - 128543 5.7 130 66 Op 1 . + CDS 128897 - 129070 109 ## STER_1644 hypothetical protein + Prom 129076 - 129135 3.3 131 66 Op 2 . + CDS 129167 - 129334 105 ## STER_1643 hypothetical protein + Term 129439 - 129486 6.4 + Prom 129524 - 129583 7.3 132 67 Tu 1 . + CDS 129664 - 130065 315 ## STER_1642 hypothetical protein + Prom 130074 - 130133 6.6 133 68 Tu 1 . + CDS 130316 - 130447 89 ## + Term 130448 - 130482 -1.0 + Prom 130508 - 130567 8.3 134 69 Op 1 . + CDS 130648 - 130875 306 ## STER_1641 hypothetical protein 135 69 Op 2 . + CDS 130887 - 131279 186 ## STER_1640 hypothetical protein + Prom 131468 - 131527 7.3 136 70 Op 1 . + CDS 131749 - 131967 300 ## SMU.151 hypothetical protein 137 70 Op 2 . + CDS 132000 - 132227 323 ## 138 70 Op 3 . + CDS 132277 - 132690 260 ## stu1674 hypothetical protein + Prom 132717 - 132776 1.6 139 71 Tu 1 . + CDS 132803 - 132982 181 ## STER_1639 hypothetical protein + Prom 133030 - 133089 6.2 140 72 Tu 1 . + CDS 133110 - 134036 923 ## stu1676 immunity/modification protein + Term 134037 - 134082 4.2 + Prom 134100 - 134159 4.7 141 73 Tu 1 . + CDS 134201 - 134497 285 ## STER_1636 XRE family transcriptional regulatot + Term 134653 - 134691 4.5 - Term 134634 - 134686 10.5 142 74 Tu 1 . - CDS 134696 - 136963 1966 ## stu1672 x-prolyl-dipeptidyl aminopeptidase (EC:3.4.14.11) - Prom 137121 - 137180 6.8 - Term 137149 - 137197 6.9 143 75 Tu 1 . - CDS 137262 - 137540 233 ## str1670 hypothetical protein - Prom 137738 - 137797 5.7 + Prom 137739 - 137798 5.8 144 76 Op 1 . + CDS 137894 - 138661 852 ## str1668 C3-degrading proteinase 145 76 Op 2 . + CDS 138661 - 139608 653 ## COG1680 Beta-lactamase class C and other penicillin binding proteins + Term 139781 - 139826 9.9 146 77 Op 1 1/0.344 - CDS 139806 - 140219 357 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 140253 - 140291 2.1 147 77 Op 2 . - CDS 140304 - 140945 420 ## COG3338 Carbonic anhydrase - Prom 141162 - 141221 12.1 - Term 141189 - 141232 2.5 148 78 Op 1 . - CDS 141236 - 143548 2377 ## COG1882 Pyruvate-formate lyase - Prom 143573 - 143632 3.1 149 78 Op 2 . - CDS 143635 - 143817 111 ## + Prom 143680 - 143739 6.6 150 79 Tu 1 . + CDS 143816 - 144919 1021 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Prom 144929 - 144988 3.9 151 80 Op 1 . + CDS 145192 - 145638 235 ## str1655 hypothetical protein 152 80 Op 2 . + CDS 145705 - 145932 114 ## gi|228477333|ref|ZP_04061971.1| hypothetical protein STRSA0001_0259 + Term 146050 - 146095 11.4 + Prom 146123 - 146182 5.2 153 81 Tu 1 . + CDS 146217 - 147047 934 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 147195 - 147232 1.0 + Prom 147348 - 147407 7.2 154 82 Op 1 34/0.000 + CDS 147482 - 148405 1057 ## COG0765 ABC-type amino acid transport system, permease component 155 82 Op 2 . + CDS 148405 - 149148 618 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 149310 - 149348 -0.6 + Prom 149157 - 149216 2.3 156 83 Op 1 . + CDS 149363 - 149587 257 ## STER_1616 hypothetical protein 157 83 Op 2 . + CDS 149653 - 150573 609 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 150733 - 150786 0.2 + Prom 150906 - 150965 8.3 158 84 Tu 1 . + CDS 150986 - 151828 974 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 151844 - 151873 -0.2 159 85 Tu 1 . - CDS 151873 - 152208 139 ## COG3464 Transposase and inactivated derivatives - Prom 152392 - 152451 4.8 160 86 Op 1 14/0.000 + CDS 152446 - 152985 383 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 161 86 Op 2 4/0.021 + CDS 153019 - 153516 272 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 162 86 Op 3 . + CDS 153533 - 154570 393 ## PROTEIN SUPPORTED gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 + Term 154588 - 154625 2.2 + Prom 154572 - 154631 3.3 163 87 Op 1 6/0.000 + CDS 154656 - 155600 801 ## COG1242 Predicted Fe-S oxidoreductase 164 87 Op 2 . + CDS 155597 - 156145 551 ## COG0500 SAM-dependent methyltransferases 165 87 Op 3 . + CDS 156142 - 156384 249 ## STER_1609 hypothetical protein 166 87 Op 4 . + CDS 156393 - 157313 809 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 167 87 Op 5 . + CDS 157326 - 158459 1123 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters + Term 158474 - 158522 8.1 - Term 158469 - 158505 2.1 168 88 Op 1 . - CDS 158508 - 158636 79 ## 169 88 Op 2 . - CDS 158668 - 158829 198 ## - Prom 158923 - 158982 4.7 - Term 159131 - 159182 12.5 170 89 Tu 1 . - CDS 159234 - 160016 186 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 160040 - 160099 9.2 + Prom 160040 - 160099 7.8 171 90 Tu 1 . + CDS 160126 - 161457 1438 ## COG1253 Hemolysins and related proteins containing CBS domains + Term 161502 - 161570 2.2 + Prom 162308 - 162367 7.8 172 91 Op 1 . + CDS 162488 - 163288 1017 ## COG1180 Pyruvate-formate lyase-activating enzyme + Term 163296 - 163324 -0.9 173 91 Op 2 . + CDS 163358 - 164110 833 ## str1639 hypothetical protein + Term 164121 - 164157 3.1 - Term 164151 - 164175 -1.0 174 92 Tu 1 . - CDS 164189 - 164641 663 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 164661 - 164720 7.7 + Prom 164761 - 164820 7.0 175 93 Tu 1 . + CDS 165010 - 166224 1403 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 166231 - 166273 3.8 + Prom 166345 - 166404 9.9 176 94 Op 1 2/0.146 + CDS 166483 - 167268 980 ## COG4465 Pleiotropic transcriptional repressor 177 94 Op 2 . + CDS 167330 - 167881 703 ## COG1335 Amidases related to nicotinamidase + Prom 168001 - 168060 4.7 178 95 Tu 1 . + CDS 168087 - 169526 1653 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase + Term 169535 - 169576 1.8 + Prom 169664 - 169723 7.3 179 96 Op 1 4/0.021 + CDS 169886 - 170152 286 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases + Prom 170185 - 170244 1.9 180 96 Op 2 . + CDS 170331 - 170603 319 ## COG0438 Glycosyltransferase + Term 170628 - 170674 3.9 + Prom 170649 - 170708 4.9 181 97 Op 1 31/0.000 + CDS 170743 - 171045 457 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 182 97 Op 2 21/0.000 + CDS 171045 - 172511 401 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 183 97 Op 3 . + CDS 172511 - 173953 1630 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 174096 - 174143 2.0 184 98 Tu 1 . - CDS 174600 - 174866 104 ## smi_0596 transposase - Prom 174931 - 174990 2.7 185 99 Tu 1 . - CDS 175007 - 175234 240 ## smi_0597 transposase 186 100 Op 1 2/0.146 + CDS 176269 - 176544 196 ## COG3464 Transposase and inactivated derivatives 187 100 Op 2 . + CDS 176562 - 177065 335 ## COG3464 Transposase and inactivated derivatives - Term 177114 - 177145 0.2 188 101 Op 1 . - CDS 177190 - 177903 817 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 189 101 Op 2 2/0.146 - CDS 177924 - 179183 1161 ## COG1641 Uncharacterized conserved protein 190 101 Op 3 . - CDS 179180 - 179950 631 ## COG1691 NCAIR mutase (PurE)-related proteins 191 101 Op 4 . - CDS 179959 - 181233 1318 ## COG3875 Uncharacterized conserved protein - Prom 181332 - 181391 5.3 + Prom 181241 - 181300 8.0 192 102 Op 1 . + CDS 181402 - 182073 559 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 193 102 Op 2 . + CDS 182075 - 182923 789 ## COG1606 ATP-utilizing enzymes of the PP-loop superfamily 194 102 Op 3 . + CDS 182927 - 183451 427 ## COG3803 Uncharacterized protein conserved in bacteria 195 102 Op 4 5/0.010 + CDS 183438 - 184991 1312 ## COG0747 ABC-type dipeptide transport system, periplasmic component 196 102 Op 5 . + CDS 184994 - 185779 289 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 197 102 Op 6 . + CDS 185757 - 186539 353 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 198 102 Op 7 49/0.000 + CDS 186527 - 187477 494 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 199 102 Op 8 . + CDS 187467 - 188294 816 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 200 103 Tu 1 . - CDS 188307 - 188840 451 ## COG0500 SAM-dependent methyltransferases - Prom 189025 - 189084 6.7 201 104 Op 1 . + CDS 189348 - 189731 263 ## str1624 hypothetical protein 202 104 Op 2 1/0.344 + CDS 189807 - 190724 780 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 190792 - 190851 3.8 203 105 Op 1 6/0.000 + CDS 190892 - 191389 532 ## COG2179 Predicted hydrolase of the HAD superfamily 204 105 Op 2 2/0.146 + CDS 191389 - 192507 1060 ## COG1161 Predicted GTPases 205 105 Op 3 7/0.000 + CDS 192537 - 192854 504 ## PROTEIN SUPPORTED gi|55821596|ref|YP_140038.1| hypothetical protein stu1620 206 105 Op 4 9/0.000 + CDS 192926 - 193558 787 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 207 105 Op 5 1/0.344 + CDS 193555 - 194148 556 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 208 105 Op 6 1/0.344 + CDS 194152 - 194652 273 ## COG1335 Amidases related to nicotinamidase 209 105 Op 7 6/0.000 + CDS 194667 - 195017 471 ## COG0799 Uncharacterized homolog of plant Iojap protein + Term 195024 - 195061 4.8 210 105 Op 8 3/0.031 + CDS 195341 - 196081 629 ## COG0500 SAM-dependent methyltransferases 211 105 Op 9 . + CDS 196088 - 197179 827 ## COG1323 Predicted nucleotidyltransferase + Term 197183 - 197226 5.2 + Prom 197809 - 197868 4.5 212 106 Tu 1 . + CDS 197913 - 200018 1467 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 200047 - 200090 7.8 + Prom 200262 - 200321 15.2 213 107 Op 1 . + CDS 200350 - 200928 380 ## SmuNN2025_1634 hypothetical protein 214 107 Op 2 . + CDS 200947 - 201291 324 ## lp_0629 prophage Lp1 protein 6 215 107 Op 3 . + CDS 201329 - 201679 167 ## + Term 201791 - 201839 3.6 - Term 201659 - 201694 6.0 216 108 Op 1 . - CDS 201696 - 201995 358 ## STER_1574 hypothetical protein 217 108 Op 2 . - CDS 201992 - 202411 496 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases - Prom 202440 - 202499 8.4 + Prom 202392 - 202451 6.2 218 109 Op 1 7/0.000 + CDS 202476 - 203207 263 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 219 109 Op 2 1/0.344 + CDS 203204 - 204241 904 ## COG4473 Predicted ABC-type exoprotein transport system, permease component 220 110 Op 1 5/0.010 + CDS 204362 - 205090 752 ## COG0510 Predicted choline kinase involved in LPS biosynthesis 221 110 Op 2 . + CDS 205100 - 205741 734 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase + Term 205770 - 205806 4.1 + TRNA 205803 - 205889 53.7 # Ser GGA 0 0 - Term 205890 - 205937 9.3 222 111 Tu 1 . - CDS 205961 - 207142 1184 ## COG2081 Predicted flavoproteins - Prom 207203 - 207262 6.1 + Prom 207171 - 207230 9.6 223 112 Tu 1 . + CDS 207255 - 208973 2345 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 208994 - 209033 2.1 - Term 208980 - 209019 2.1 224 113 Tu 1 . - CDS 209131 - 209490 366 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme - Prom 209584 - 209643 5.1 + Prom 209906 - 209965 4.6 225 114 Op 1 . + CDS 209994 - 210530 634 ## str1602 hypothetical protein + Term 210538 - 210568 2.7 226 114 Op 2 1/0.344 + CDS 210580 - 211170 772 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Prom 211230 - 211289 4.0 227 115 Tu 1 . + CDS 211345 - 212073 466 ## COG0789 Predicted transcriptional regulators 228 116 Tu 1 . + CDS 212181 - 212441 283 ## STER_1561 hypothetical protein + Prom 212443 - 212502 2.9 229 117 Tu 1 . + CDS 212696 - 213019 207 ## Spy49_1644c transposase + Term 213030 - 213065 1.7 - Term 212970 - 213010 6.7 230 118 Tu 1 . - CDS 213144 - 213443 423 ## COG0718 Uncharacterized protein conserved in bacteria - Prom 213537 - 213596 7.2 + Prom 213671 - 213730 9.9 231 119 Tu 1 . + CDS 213784 - 214293 386 ## str1597 hypothetical protein + Prom 214378 - 214437 3.4 232 120 Op 1 . + CDS 214467 - 216806 2218 ## COG0474 Cation transport ATPase + Term 216814 - 216849 3.3 233 120 Op 2 . + CDS 216900 - 217250 413 ## str1595 hypothetical protein + Term 217357 - 217390 1.5 234 121 Tu 1 . + CDS 217826 - 218029 169 ## STER_1555 hypothetical protein 235 122 Op 1 35/0.000 + CDS 218201 - 219556 1802 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 236 122 Op 2 13/0.000 + CDS 219553 - 220119 459 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 237 122 Op 3 21/0.000 + CDS 220211 - 221215 1235 ## COG0547 Anthranilate phosphoribosyltransferase 238 122 Op 4 9/0.000 + CDS 221212 - 221979 865 ## COG0134 Indole-3-glycerol phosphate synthase 239 122 Op 5 23/0.000 + CDS 221966 - 222547 471 ## COG0135 Phosphoribosylanthranilate isomerase 240 122 Op 6 37/0.000 + CDS 222544 - 223752 1449 ## COG0133 Tryptophan synthase beta chain 241 122 Op 7 . + CDS 223756 - 224538 918 ## PROTEIN SUPPORTED gi|148997862|ref|ZP_01825426.1| ribosomal protein L11 methyltransferase + Term 224544 - 224581 4.8 + Prom 225079 - 225138 5.4 242 123 Op 1 . + CDS 225244 - 226110 244 ## COG1131 ABC-type multidrug transport system, ATPase component 243 123 Op 2 . + CDS 226115 - 226867 197 ## gi|297588156|ref|ZP_06946800.1| conserved hypothetical protein 244 123 Op 3 . + CDS 226905 - 227633 349 ## COG3279 Response regulator of the LytR/AlgR family + Prom 227649 - 227708 5.7 245 124 Tu 1 . + CDS 227807 - 228283 -84 ## + Prom 228406 - 228465 2.7 246 125 Tu 1 . + CDS 228493 - 228882 280 ## gi|297588149|ref|ZP_06946793.1| hypothetical protein HMPREF0391_11216 + Term 228887 - 228922 -0.8 + Prom 228899 - 228958 4.9 247 126 Tu 1 . + CDS 228988 - 230160 868 ## STER_0939 major facilitator superfamily permease + Term 230186 - 230225 6.4 + Prom 230229 - 230288 5.8 248 127 Op 1 1/0.344 + CDS 230328 - 230759 426 ## COG3682 Predicted transcriptional regulator 249 127 Op 2 15/0.000 + CDS 230763 - 232991 2330 ## COG2217 Cation transport ATPase 250 127 Op 3 . + CDS 233065 - 233268 233 ## COG2608 Copper chaperone + Prom 233293 - 233352 6.6 251 128 Tu 1 . + CDS 233406 - 234452 1317 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes + Term 234469 - 234527 14.3 + Prom 234530 - 234589 4.6 252 129 Op 1 17/0.000 + CDS 234776 - 235456 530 ## COG0765 ABC-type amino acid transport system, permease component 253 129 Op 2 34/0.000 + CDS 235416 - 236093 693 ## COG0765 ABC-type amino acid transport system, permease component 254 129 Op 3 16/0.000 + CDS 236095 - 236853 307 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 255 129 Op 4 . + CDS 236896 - 237750 1020 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 237758 - 237786 -0.9 - Term 237793 - 237839 -1.0 256 130 Op 1 . - CDS 237846 - 238535 323 ## stu1578 hypothetical protein 257 130 Op 2 . - CDS 238504 - 239214 200 ## str1577 hypothetical protein - Prom 239327 - 239386 7.2 + Prom 239262 - 239321 4.7 258 131 Tu 1 . + CDS 239342 - 240715 1740 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase + Term 240725 - 240754 -0.3 + Prom 240720 - 240779 6.1 259 132 Op 1 . + CDS 240805 - 241251 347 ## str1575 hypothetical protein 260 132 Op 2 . + CDS 241273 - 241470 157 ## STER_1533 hypothetical protein + Term 241476 - 241531 5.1 + Prom 241543 - 241602 7.0 261 133 Tu 1 . + CDS 241732 - 243276 2030 ## COG4108 Peptide chain release factor RF-3 + Term 243289 - 243325 4.2 - Term 243374 - 243425 9.6 262 134 Tu 1 . - CDS 243428 - 244003 550 ## COG3859 Predicted membrane protein - Prom 244240 - 244299 6.9 + Prom 244203 - 244262 5.6 263 135 Op 1 . + CDS 244308 - 244688 584 ## str1570 hypothetical protein 264 135 Op 2 4/0.021 + CDS 244701 - 245606 787 ## COG0598 Mg2+ and Co2+ transporters + Term 245623 - 245657 1.0 + Prom 245657 - 245716 4.9 265 136 Tu 1 . + CDS 245801 - 247390 2050 ## COG0513 Superfamily II DNA and RNA helicases + Term 247396 - 247437 8.6 + Prom 247405 - 247464 3.6 266 137 Op 1 . + CDS 247607 - 248119 345 ## str1597 hypothetical protein 267 137 Op 2 . + CDS 248143 - 248652 361 ## str1597 hypothetical protein + Term 248746 - 248775 0.5 - Term 248931 - 248970 -0.7 268 138 Op 1 6/0.000 - CDS 249033 - 249302 378 ## COG2827 Predicted endonuclease containing a URI domain 269 138 Op 2 . - CDS 249306 - 250070 867 ## COG4123 Predicted O-methyltransferase - Term 250077 - 250113 1.3 270 138 Op 3 . - CDS 250120 - 251055 833 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 251140 - 251199 5.7 + Prom 251103 - 251162 6.2 271 139 Tu 1 . + CDS 251184 - 251939 832 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 251946 - 251987 6.4 + Prom 251941 - 252000 8.2 272 140 Op 1 4/0.021 + CDS 252139 - 252741 347 ## COG1555 DNA uptake protein and related DNA-binding proteins 273 140 Op 2 . + CDS 252731 - 254971 885 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 274 140 Op 3 1/0.344 + CDS 255057 - 256319 1492 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 256326 - 256361 1.0 275 141 Op 1 3/0.031 + CDS 256385 - 256930 910 ## PROTEIN SUPPORTED gi|116628248|ref|YP_820867.1| GNAT family acetyltransferase 276 141 Op 2 2/0.146 + CDS 256923 - 258203 1022 ## COG4109 Predicted transcriptional regulator containing CBS domains 277 141 Op 3 2/0.146 + CDS 258247 - 259107 1032 ## COG0024 Methionine aminopeptidase 278 141 Op 4 . + CDS 259109 - 260068 634 ## COG1295 Predicted membrane protein + Term 260079 - 260112 2.1 + Prom 260080 - 260139 5.0 279 142 Op 1 1/0.344 + CDS 260159 - 260668 540 ## COG4708 Predicted membrane protein 280 142 Op 2 2/0.146 + CDS 260719 - 262677 2293 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 281 142 Op 3 . + CDS 262687 - 263700 1204 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 263714 - 263745 3.1 282 143 Tu 1 . + CDS 263755 - 264105 175 ## gi|228477140|ref|ZP_04061778.1| hypothetical protein STRSA0001_0139 283 144 Tu 1 . + CDS 264215 - 264754 212 ## gi|228477140|ref|ZP_04061778.1| hypothetical protein STRSA0001_0139 + Prom 264793 - 264852 3.8 284 145 Op 1 . + CDS 264909 - 265028 81 ## gi|228477203|ref|ZP_04061841.1| conserved hypothetical protein 285 145 Op 2 . + CDS 265074 - 265805 599 ## SMU.1765c hypothetical protein 286 145 Op 3 . + CDS 265802 - 267265 1060 ## gi|228477254|ref|ZP_04061892.1| putative membrane protein + Term 267426 - 267486 9.1 - Term 267418 - 267466 8.8 287 146 Op 1 . - CDS 267469 - 267948 565 ## STER_1509 hypothetical protein 288 146 Op 2 . - CDS 268021 - 268848 1066 ## COG0708 Exonuclease III - Prom 268931 - 268990 5.4 + Prom 268894 - 268953 5.6 289 147 Tu 1 . + CDS 268974 - 269306 173 ## gi|228477208|ref|ZP_04061846.1| conserved hypothetical protein 290 148 Tu 1 . + CDS 269807 - 270019 175 ## gi|228477242|ref|ZP_04061880.1| conserved hypothetical protein + Term 270024 - 270059 6.0 - Term 270055 - 270085 0.7 291 149 Tu 1 . - CDS 270103 - 270981 844 ## COG0500 SAM-dependent methyltransferases - Prom 271006 - 271065 6.6 + Prom 271289 - 271348 9.2 292 150 Op 1 19/0.000 + CDS 271409 - 271681 458 ## PROTEIN SUPPORTED gi|55821524|ref|YP_139966.1| 30S ribosomal protein S16 293 150 Op 2 . + CDS 271693 - 271941 346 ## COG1837 Predicted RNA-binding protein (contains KH domain) + Term 271942 - 271975 2.2 + Prom 272006 - 272065 5.6 294 151 Op 1 . + CDS 272107 - 273369 1122 ## COG0285 Folylpolyglutamate synthase 295 151 Op 2 . + CDS 273436 - 275280 1983 ## COG0531 Amino acid transporters + Term 275332 - 275370 2.9 296 152 Tu 1 . - CDS 276540 - 277127 333 ## COG1309 Transcriptional regulator - Prom 277168 - 277227 6.7 + Prom 277880 - 277939 8.1 297 153 Op 1 . + CDS 278166 - 279086 415 ## COG1131 ABC-type multidrug transport system, ATPase component 298 153 Op 2 . + CDS 279079 - 279822 275 ## EUBREC_3040 hypothetical protein 299 153 Op 3 . + CDS 279825 - 280040 141 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 300 153 Op 4 . + CDS 280051 - 280542 166 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 301 153 Op 5 . + CDS 280598 - 280846 89 ## + Prom 280875 - 280934 7.4 302 154 Tu 1 . + CDS 280995 - 281267 140 ## + Term 281491 - 281536 2.1 303 155 Tu 1 . - CDS 281372 - 281638 230 ## COG3328 Transposase and inactivated derivatives - Prom 281732 - 281791 4.5 + Prom 282143 - 282202 9.5 304 156 Op 1 4/0.021 + CDS 282227 - 282790 739 ## COG0302 GTP cyclohydrolase I 305 156 Op 2 . + CDS 282799 - 283599 950 ## COG0294 Dihydropteroate synthase and related enzymes - Term 283592 - 283629 -0.4 306 157 Tu 1 . - CDS 283630 - 285081 1421 ## COG0366 Glycosidases - Prom 285306 - 285365 5.8 + Prom 285216 - 285275 6.4 307 158 Op 1 17/0.000 + CDS 285301 - 285660 276 ## COG1539 Dihydroneopterin aldolase 308 158 Op 2 1/0.344 + CDS 285657 - 286148 264 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 + Term 286162 - 286194 -0.9 + Prom 286180 - 286239 5.2 309 159 Op 1 3/0.031 + CDS 286338 - 287240 1245 ## COG0812 UDP-N-acetylmuramate dehydrogenase 310 159 Op 2 30/0.000 + CDS 287285 - 288439 1163 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 311 159 Op 3 36/0.000 + CDS 288423 - 289217 733 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 312 159 Op 4 25/0.000 + CDS 289214 - 289993 631 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 313 159 Op 5 . + CDS 289986 - 291053 1104 ## COG0687 Spermidine/putrescine-binding periplasmic protein + Term 291099 - 291152 18.1 - Term 291087 - 291140 18.1 314 160 Tu 1 . - CDS 291198 - 292454 518 ## COG3464 Transposase and inactivated derivatives - Prom 292596 - 292655 4.6 + Prom 292571 - 292630 10.3 315 161 Op 1 . + CDS 292665 - 293564 1269 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Prom 293673 - 293732 6.3 316 161 Op 2 . + CDS 293768 - 294232 428 ## COG1943 Transposase and inactivated derivatives + Term 294296 - 294331 5.6 - Term 294284 - 294317 2.0 317 162 Tu 1 . - CDS 294368 - 294766 422 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 - Prom 294794 - 294853 5.1 + Prom 294753 - 294812 6.3 318 163 Tu 1 . + CDS 294882 - 295775 923 ## COG1940 Transcriptional regulator/sugar kinase + Term 295832 - 295867 2.5 + Prom 295847 - 295906 8.4 319 164 Op 1 . + CDS 295929 - 297023 1204 ## COG1932 Phosphoserine aminotransferase 320 164 Op 2 . + CDS 297036 - 297593 381 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 321 164 Op 3 . + CDS 297612 - 298790 1677 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 298805 - 298841 3.1 322 165 Op 1 2/0.146 + CDS 298849 - 299343 453 ## COG0350 Methylated DNA-protein cysteine methyltransferase 323 165 Op 2 . + CDS 299378 - 299731 331 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Term 299865 - 299907 4.3 + TRNA 299789 - 299859 50.6 # Thr GGT 0 0 324 166 Op 1 . + CDS 300196 - 300384 245 ## STER_1483 putative effector of murein hydrolase LrgA 325 166 Op 2 . + CDS 300362 - 301072 845 ## COG1346 Putative effector of murein hydrolase + Term 301081 - 301115 1.2 + Prom 301078 - 301137 3.4 326 167 Op 1 3/0.031 + CDS 301158 - 301718 640 ## COG0546 Predicted phosphatases 327 167 Op 2 2/0.146 + CDS 301719 - 303671 2240 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 303698 - 303745 4.1 + Prom 303679 - 303738 5.1 328 168 Tu 1 . + CDS 303768 - 305492 1784 ## COG4477 Negative regulator of septation ring formation + Term 305501 - 305533 2.0 + Prom 305500 - 305559 3.6 329 169 Tu 1 . + CDS 305603 - 306253 765 ## COG0560 Phosphoserine phosphatase + Term 306297 - 306331 0.6 + Prom 306333 - 306392 3.8 330 170 Tu 1 . + CDS 306504 - 307706 916 ## COG3547 Transposase and inactivated derivatives + Term 307888 - 307927 6.8 331 171 Tu 1 . + CDS 308100 - 308324 156 ## str1518 hypothetical protein + Term 308350 - 308386 3.3 332 172 Tu 1 . - CDS 308377 - 309267 598 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 309294 - 309353 7.0 333 173 Tu 1 . - CDS 309376 - 309633 210 ## - Prom 309656 - 309715 5.4 + Prom 309990 - 310049 6.6 334 174 Tu 1 . + CDS 310103 - 310486 417 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 310549 - 310590 1.5 335 175 Op 1 . + CDS 310886 - 311086 123 ## str1506 hypothetical protein 336 175 Op 2 . + CDS 311087 - 311818 727 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Prom 311924 - 311983 3.3 337 176 Tu 1 . + CDS 312122 - 313435 703 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 338 177 Tu 1 . + CDS 313563 - 313760 285 ## str1503 hypothetical protein - Term 313778 - 313836 10.2 339 178 Op 1 16/0.000 - CDS 313839 - 314579 271 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 340 178 Op 2 . - CDS 314579 - 316777 2264 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 316803 - 316862 6.6 + Prom 316749 - 316808 7.3 341 179 Op 1 . + CDS 316976 - 317911 786 ## COG1266 Predicted metal-dependent membrane protease + Term 317912 - 317945 1.3 342 179 Op 2 . + CDS 317982 - 318602 219 ## str1498 hypothetical protein 343 179 Op 3 . + CDS 318592 - 320583 2208 ## COG0556 Helicase subunit of the DNA excision repair complex 344 179 Op 4 . + CDS 320594 - 321088 287 ## gi|290511289|ref|ZP_06550658.1| predicted protein 345 179 Op 5 2/0.146 + CDS 321147 - 321611 485 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 321618 - 321659 6.0 + Prom 321738 - 321797 9.8 346 180 Op 1 9/0.000 + CDS 321826 - 322638 1070 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 347 180 Op 2 . + CDS 322650 - 323447 862 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 323463 - 323502 5.2 + Prom 323568 - 323627 4.8 348 181 Op 1 . + CDS 323693 - 324802 1097 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 349 181 Op 2 1/0.344 + CDS 324864 - 325658 1027 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 325665 - 325700 4.4 + Prom 325692 - 325751 3.1 350 182 Tu 1 . + CDS 325822 - 326028 308 ## PROTEIN SUPPORTED gi|55737452|gb|AAV61094.1| 30S ribosomal protein S21 + Term 326047 - 326090 9.6 + Prom 326082 - 326141 6.0 351 183 Tu 1 . + CDS 326365 - 327567 916 ## COG3547 Transposase and inactivated derivatives + Term 327750 - 327791 8.1 - Term 327737 - 327777 4.1 352 184 Tu 1 . - CDS 327811 - 328209 543 ## COG1970 Large-conductance mechanosensitive channel - Prom 328274 - 328333 6.3 + Prom 328259 - 328318 13.0 353 185 Op 1 31/0.000 + CDS 328352 - 330163 1568 ## COG0358 DNA primase (bacterial type) 354 185 Op 2 2/0.146 + CDS 330167 - 331276 1487 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 331291 - 331323 3.1 355 186 Op 1 . + CDS 331330 - 331665 515 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 356 186 Op 2 . + CDS 331676 - 332602 996 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 357 186 Op 3 . + CDS 332607 - 334082 574 ## GALLO_1373 hypothetical protein + Term 334098 - 334132 2.2 + Prom 334085 - 334144 4.9 358 187 Tu 1 1/0.344 + CDS 334168 - 335019 1136 ## COG1091 dTDP-4-dehydrorhamnose reductase + Term 335049 - 335090 5.0 + Prom 335050 - 335109 6.4 359 188 Op 1 8/0.000 + CDS 335189 - 336391 539 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 360 188 Op 2 11/0.000 + CDS 336397 - 337341 539 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 361 188 Op 3 11/0.000 + CDS 337359 - 338081 590 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Prom 338228 - 338287 3.9 362 188 Op 4 . + CDS 338340 - 339044 544 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 363 188 Op 5 . + CDS 339044 - 339397 296 ## STER_1439 hypothetical protein 364 188 Op 6 . + CDS 339390 - 340166 595 ## STER_1438 cell wall biosynthesis glycosyltransferase + Term 340200 - 340240 1.1 + Prom 340205 - 340264 6.0 365 189 Op 1 1/0.344 + CDS 340358 - 343321 2211 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 366 189 Op 2 . + CDS 343380 - 344615 1102 ## COG4713 Predicted membrane protein 367 189 Op 3 25/0.000 + CDS 344619 - 345866 809 ## COG0438 Glycosyltransferase + Term 345897 - 345951 7.2 368 189 Op 4 26/0.000 + CDS 346268 - 347188 990 ## COG0438 Glycosyltransferase 369 189 Op 5 3/0.031 + CDS 347185 - 348123 597 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 370 189 Op 6 26/0.000 + CDS 348124 - 348930 808 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 371 189 Op 7 1/0.344 + CDS 348930 - 350132 1180 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 372 189 Op 8 . + CDS 350133 - 350843 395 ## COG3754 Lipopolysaccharide biosynthesis protein + Term 350895 - 350937 -0.8 + Prom 350857 - 350916 2.4 373 190 Op 1 . + CDS 350987 - 351775 329 ## gi|228477260|ref|ZP_04061898.1| rhamnosyltransferase 374 190 Op 2 . + CDS 351821 - 352507 460 ## COG2003 DNA repair proteins + Term 352539 - 352574 4.3 - Term 352527 - 352562 4.3 375 191 Op 1 2/0.146 - CDS 352565 - 353260 743 ## COG2071 Predicted glutamine amidotransferases 376 191 Op 2 . - CDS 353253 - 353912 593 ## COG2344 AT-rich DNA-binding protein - Prom 353946 - 354005 6.1 - Term 354000 - 354030 -0.4 377 192 Op 1 . - CDS 354055 - 354402 395 ## stu1462 hypothetical protein 378 192 Op 2 2/0.146 - CDS 354404 - 355516 1181 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 379 192 Op 3 2/0.146 - CDS 355520 - 356491 1232 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 356561 - 356620 6.4 - Term 356718 - 356749 1.0 380 193 Tu 1 . - CDS 356857 - 357432 550 ## COG4116 Uncharacterized protein conserved in bacteria - Prom 357478 - 357537 6.4 + Prom 357416 - 357475 7.5 381 194 Op 1 6/0.000 + CDS 357533 - 358198 564 ## COG2357 Uncharacterized protein conserved in bacteria 382 194 Op 2 7/0.000 + CDS 358173 - 359009 894 ## COG0061 Predicted sugar kinase 383 194 Op 3 2/0.146 + CDS 359006 - 359902 314 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 384 194 Op 4 . + CDS 359916 - 360899 1287 ## COG0280 Phosphotransacetylase + Term 360909 - 360959 1.3 + Prom 361042 - 361101 6.8 385 195 Op 1 21/0.000 + CDS 361127 - 363097 347 ## PROTEIN SUPPORTED gi|148984587|ref|ZP_01817855.1| hypothetical protein CGSSp3BS71_01047 + Term 363108 - 363147 5.3 386 195 Op 2 49/0.000 + CDS 363158 - 364651 1451 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 387 195 Op 3 44/0.000 + CDS 364651 - 365577 1064 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 388 195 Op 4 44/0.000 + CDS 365587 - 366672 1357 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 389 195 Op 5 . + CDS 366665 - 367594 635 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 367616 - 367650 4.0 - Term 367605 - 367636 3.4 390 196 Op 1 . - CDS 367644 - 368429 825 ## str1437 ABC transporter permease protein 391 196 Op 2 8/0.000 - CDS 368441 - 369139 236 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 392 196 Op 3 . - CDS 369144 - 369521 455 ## COG1725 Predicted transcriptional regulators - Prom 369564 - 369623 6.4 + Prom 369615 - 369674 5.9 393 197 Op 1 4/0.021 + CDS 369724 - 370497 939 ## COG0561 Predicted hydrolases of the HAD superfamily 394 197 Op 2 2/0.146 + CDS 370490 - 371308 819 ## COG0561 Predicted hydrolases of the HAD superfamily 395 197 Op 3 . + CDS 371319 - 372623 879 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Term 372627 - 372668 1.0 + Prom 372652 - 372711 5.3 396 198 Op 1 25/0.000 + CDS 372844 - 373473 794 ## COG0194 Guanylate kinase 397 198 Op 2 3/0.031 + CDS 373495 - 373809 472 ## COG1758 DNA-directed RNA polymerase, subunit K/omega + Term 373841 - 373886 9.0 + Prom 373903 - 373962 4.1 398 199 Op 1 4/0.021 + CDS 373990 - 376347 2289 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 399 199 Op 2 20/0.000 + CDS 376365 - 377300 1067 ## COG0223 Methionyl-tRNA formyltransferase 400 199 Op 3 3/0.031 + CDS 377284 - 378612 1011 ## COG0144 tRNA and rRNA cytosine-C5-methylases 401 199 Op 4 17/0.000 + CDS 378656 - 379393 832 ## COG0631 Serine/threonine protein phosphatase 402 199 Op 5 . + CDS 379393 - 381261 1721 ## COG0515 Serine/threonine protein kinase + Term 381292 - 381322 0.3 + Prom 381534 - 381593 7.4 403 200 Tu 1 . + CDS 381638 - 382165 187 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component + Term 382187 - 382221 1.1 + Prom 382234 - 382293 7.3 404 201 Op 1 7/0.000 + CDS 382513 - 383016 630 ## COG4758 Predicted membrane protein 405 201 Op 2 19/0.000 + CDS 383013 - 384023 878 ## COG4585 Signal transduction histidine kinase 406 201 Op 3 . + CDS 384013 - 384657 722 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 384856 - 384886 2.0 + TRNA 384945 - 385016 64.6 # Gln TTG 0 0 + TRNA 385046 - 385117 64.7 # Glu TTC 0 0 + Prom 385252 - 385311 3.8 407 202 Op 1 30/0.000 + CDS 385332 - 385850 522 ## COG0806 RimM protein, required for 16S rRNA processing 408 202 Op 2 1/0.344 + CDS 385840 - 386559 872 ## COG0336 tRNA-(guanine-N1)-methyltransferase 409 202 Op 3 . + CDS 386561 - 387559 231 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 387607 - 387636 -0.2 + Prom 387600 - 387659 4.8 410 203 Tu 1 . + CDS 387757 - 390072 2256 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 390116 - 390182 1.4 + Prom 390191 - 390250 7.0 411 204 Op 1 9/0.000 + CDS 390282 - 392477 1803 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Term 392536 - 392581 -0.7 + Prom 392500 - 392559 4.6 412 204 Op 2 6/0.000 + CDS 392649 - 394529 1467 ## COG0296 1,4-alpha-glucan branching enzyme + Prom 394577 - 394636 2.9 413 204 Op 3 7/0.000 + CDS 394720 - 395862 1308 ## COG0448 ADP-glucose pyrophosphorylase 414 204 Op 4 17/0.000 + CDS 395852 - 396988 1150 ## COG0448 ADP-glucose pyrophosphorylase 415 204 Op 5 10/0.000 + CDS 396985 - 398415 1389 ## COG0297 Glycogen synthase + Term 398424 - 398462 5.2 + Prom 398524 - 398583 3.8 416 204 Op 6 . + CDS 398628 - 399464 840 ## COG0058 Glucan phosphorylase 417 204 Op 7 . + CDS 399503 - 400063 561 ## SGO_1185 acetyltransferase + Term 400111 - 400145 5.3 418 205 Op 1 2/0.146 - CDS 400101 - 401090 341 ## COG3464 Transposase and inactivated derivatives 419 205 Op 2 . - CDS 401132 - 401356 113 ## COG3464 Transposase and inactivated derivatives - Prom 401460 - 401519 6.3 + Prom 401291 - 401350 6.7 420 206 Op 1 . + CDS 401587 - 403116 1289 ## LAR_1315 hypothetical protein 421 206 Op 2 . + CDS 403055 - 403693 431 ## gi|228477136|ref|ZP_04061774.1| hypothetical protein STRSA0001_0007 + Term 403704 - 403739 -0.1 - Term 403765 - 403810 4.1 422 207 Tu 1 . - CDS 403908 - 404054 111 ## smi_1536 transposase - Prom 404241 - 404300 4.4 423 208 Op 1 2/0.146 - CDS 404383 - 404562 124 ## COG3464 Transposase and inactivated derivatives 424 208 Op 2 . - CDS 404513 - 404977 128 ## COG3464 Transposase and inactivated derivatives - Prom 405081 - 405140 7.4 + Prom 405469 - 405528 7.5 425 209 Op 1 . + CDS 405638 - 406567 501 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 426 209 Op 2 . + CDS 406567 - 406812 251 ## 427 209 Op 3 . + CDS 406851 - 407324 209 ## 428 209 Op 4 . + CDS 407321 - 408427 342 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 429 209 Op 5 . + CDS 408414 - 409088 417 ## COG0684 Demethylmenaquinone methyltransferase 430 209 Op 6 . + CDS 409075 - 409905 298 ## PSPTO_3200 hypothetical protein 431 209 Op 7 . + CDS 409907 - 410242 237 ## COG1085 Galactose-1-phosphate uridylyltransferase + Term 410247 - 410280 -0.7 + Prom 410275 - 410334 4.2 432 210 Op 1 . + CDS 410374 - 410670 106 ## COG1085 Galactose-1-phosphate uridylyltransferase 433 210 Op 2 . + CDS 410642 - 411583 195 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 434 210 Op 3 . + CDS 411590 - 412240 230 ## SmuNN2025_1846 putative transcriptional regulator 435 210 Op 4 . + CDS 412288 - 412446 61 ## + Term 412694 - 412742 9.4 - Term 412682 - 412728 4.3 436 211 Tu 1 . - CDS 412827 - 412973 80 ## smi_1536 transposase 437 212 Tu 1 . - CDS 413529 - 413960 199 ## COG3464 Transposase and inactivated derivatives - Term 414265 - 414326 18.1 438 213 Tu 1 . - CDS 414365 - 416629 2002 ## COG2918 Gamma-glutamylcysteine synthetase - Prom 416770 - 416829 8.2 + Prom 417181 - 417240 1.6 439 214 Op 1 35/0.000 + CDS 417265 - 419010 213 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 440 214 Op 2 . + CDS 419000 - 420868 200 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 420877 - 420911 5.3 - Term 420865 - 420899 4.5 441 215 Tu 1 . - CDS 421013 - 421234 159 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 421438 - 421497 6.4 + Prom 421786 - 421845 5.4 442 216 Tu 1 . + CDS 421948 - 427917 6333 ## SPP_0684 zinc metalloprotease ZmpB + Term 427952 - 428007 13.4 + Prom 428513 - 428572 4.7 443 217 Tu 1 . + CDS 428724 - 428867 65 ## 444 218 Tu 1 . - CDS 428891 - 429886 724 ## COG1609 Transcriptional regulators - Prom 429998 - 430057 4.8 + Prom 429937 - 429996 8.3 445 219 Op 1 4/0.021 + CDS 430026 - 431192 1342 ## COG0153 Galactokinase 446 219 Op 2 4/0.021 + CDS 431212 - 432693 1440 ## COG4468 Galactose-1-phosphate uridyltransferase 447 219 Op 3 1/0.344 + CDS 432723 - 433724 1247 ## COG1087 UDP-glucose 4-epimerase + Term 433746 - 433788 6.7 448 220 Tu 1 1/0.344 + CDS 433794 - 434840 314 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase + Prom 434857 - 434916 7.1 449 221 Op 1 1/0.344 + CDS 434943 - 436847 1838 ## COG2211 Na+/melibiose symporter and related transporters 450 221 Op 2 . + CDS 436850 - 439867 2432 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 439908 - 439951 4.2 451 222 Op 1 28/0.000 + CDS 440700 - 441926 831 ## COG0420 DNA repair exonuclease 452 222 Op 2 . + CDS 441923 - 445102 2776 ## COG0419 ATPase involved in DNA repair + Prom 445253 - 445312 7.3 453 223 Op 1 . + CDS 445424 - 447517 1845 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 454 223 Op 2 . + CDS 447612 - 448838 347 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 448859 - 448910 7.7 455 224 Op 1 . + CDS 448939 - 450510 1315 ## SGO_0971 accessory secretory protein 456 224 Op 2 . + CDS 450497 - 452035 1299 ## SSA_0834 accessory secretory protein Asp2, putative 457 224 Op 3 . + CDS 452038 - 452484 450 ## SGO_0973 accessory secretory protein 458 224 Op 4 2/0.146 + CDS 452477 - 454852 2394 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 459 224 Op 5 4/0.021 + CDS 454865 - 456373 1593 ## COG0438 Glycosyltransferase 460 224 Op 6 . + CDS 456370 - 457722 1137 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 461 224 Op 7 . + CDS 457715 - 457894 123 ## SGO_0977 hypothetical protein 462 224 Op 8 . + CDS 457899 - 458123 283 ## gi|228476416|ref|ZP_04061109.1| conserved hypothetical protein 463 224 Op 9 . + CDS 458159 - 459160 1003 ## SSA_0831 hypothetical protein + Prom 459489 - 459548 9.2 464 225 Op 1 . + CDS 459682 - 466563 12337 ## SGO_0966 streptococcal hemagglutinin 465 225 Op 2 . + CDS 466620 - 466790 139 ## + Term 466814 - 466860 5.7 + Prom 467123 - 467182 5.8 466 226 Tu 1 . + CDS 467225 - 467788 631 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 467794 - 467834 6.1 + Prom 467844 - 467903 6.5 467 227 Op 1 18/0.000 + CDS 467982 - 468365 361 ## COG1846 Transcriptional regulators 468 227 Op 2 . + CDS 468372 - 469757 1344 ## COG0477 Permeases of the major facilitator superfamily + Term 469768 - 469810 3.4 + Prom 469767 - 469826 10.0 469 228 Tu 1 . + CDS 469917 - 470180 238 ## SSA_1740 hypothetical protein 470 229 Tu 1 . + CDS 470587 - 470820 272 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis + Term 470961 - 471011 -0.3 + Prom 471140 - 471199 8.1 471 230 Op 1 16/0.000 + CDS 471224 - 472096 1039 ## COG0214 Pyridoxine biosynthesis enzyme 472 230 Op 2 . + CDS 472097 - 472705 497 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis + Term 472844 - 472891 6.1 + Prom 472865 - 472924 9.4 473 231 Op 1 . + CDS 473097 - 473306 109 ## COG0569 K+ transport systems, NAD-binding component + Prom 473372 - 473431 6.9 474 231 Op 2 . + CDS 473460 - 475544 1897 ## SGO_1182 LPXTG cell wall surface protein + Term 475574 - 475616 6.1 + Prom 475546 - 475605 2.2 475 232 Op 1 40/0.000 + CDS 475625 - 476323 398 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 476 232 Op 2 1/0.344 + CDS 476320 - 477354 590 ## COG0642 Signal transduction histidine kinase + Prom 477389 - 477448 1.7 477 233 Op 1 . + CDS 477543 - 477737 197 ## PROTEIN SUPPORTED gi|233162|gb|AAB19387.1| ribosomal protein S4 478 233 Op 2 . + CDS 477798 - 478136 241 ## PROTEIN SUPPORTED gi|119632785|gb|ABL84398.1| ribosomal protein S4 + Term 478155 - 478192 4.8 - Term 478089 - 478131 1.2 479 234 Tu 1 . - CDS 478232 - 479146 428 ## COG0582 Integrase - Prom 479390 - 479449 6.0 480 235 Tu 1 . - CDS 479461 - 479946 330 ## SAK_2091 prophage Sa05, DNA-binding protein - Prom 479966 - 480025 5.7 + Prom 480009 - 480068 2.9 481 236 Tu 1 . + CDS 480112 - 480294 148 ## SDEG_2139 phage protein + Term 480478 - 480520 -0.5 + Prom 480568 - 480627 7.1 482 237 Op 1 . + CDS 480821 - 481096 193 ## SPH_0298 phage protein 483 237 Op 2 . + CDS 481104 - 481556 349 ## SUB1830 hypothetical protein + Term 481673 - 481715 7.1 + Prom 481927 - 481986 10.3 484 238 Op 1 . + CDS 482130 - 483191 708 ## COG4260 Putative virion core protein (lumpy skin disease virus) + Prom 483216 - 483275 2.2 485 238 Op 2 . + CDS 483295 - 483792 272 ## Apre_0475 hypothetical protein + Term 483912 - 483945 -0.3 486 239 Tu 1 . + CDS 484397 - 484798 227 ## Lebu_0405 hypothetical protein + Term 484922 - 484955 3.1 + Prom 485435 - 485494 4.0 487 240 Tu 1 . + CDS 485532 - 486005 227 ## COG1943 Transposase and inactivated derivatives + Term 486118 - 486149 4.1 + Prom 486154 - 486213 8.1 488 241 Tu 1 . + CDS 486327 - 486653 362 ## gi|228477705|ref|ZP_04062334.1| peptide methionine sulfoxide reductase + Term 486814 - 486853 2.1 - Term 486752 - 486796 6.8 489 242 Tu 1 . - CDS 486803 - 488062 1389 ## COG2966 Uncharacterized conserved protein - Prom 488199 - 488258 6.2 + Prom 488190 - 488249 6.5 490 243 Op 1 10/0.000 + CDS 488388 - 489377 1234 ## COG2376 Dihydroxyacetone kinase 491 243 Op 2 9/0.000 + CDS 489408 - 489983 838 ## COG2376 Dihydroxyacetone kinase 492 243 Op 3 . + CDS 489987 - 490361 502 ## COG3412 Uncharacterized protein conserved in bacteria 493 243 Op 4 . + CDS 490375 - 491358 1053 ## COG0673 Predicted dehydrogenases and related proteins + Term 491375 - 491421 7.2 - Term 491370 - 491401 1.0 494 244 Tu 1 . - CDS 491410 - 492603 1120 ## COG4097 Predicted ferric reductase - Prom 492654 - 492713 10.3 + Prom 492677 - 492736 8.1 495 245 Tu 1 . + CDS 492862 - 493206 184 ## STER_1333 hypothetical protein + Term 493326 - 493358 2.0 - Term 493368 - 493405 -0.3 496 246 Tu 1 . - CDS 493427 - 494911 1727 ## COG4868 Uncharacterized protein conserved in bacteria - Prom 494931 - 494990 4.8 + Prom 495091 - 495150 8.8 497 247 Op 1 36/0.000 + CDS 495334 - 496479 501 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 498 247 Op 2 36/0.000 + CDS 496495 - 497127 239 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 499 247 Op 3 5/0.010 + CDS 497141 - 498517 935 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 500 247 Op 4 40/0.000 + CDS 498590 - 499243 295 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 501 247 Op 5 . + CDS 499240 - 500544 808 ## COG0642 Signal transduction histidine kinase + Term 500548 - 500585 4.1 + Prom 500571 - 500630 9.2 502 248 Tu 1 . + CDS 500772 - 502385 1630 ## COG0366 Glycosidases + Term 502389 - 502438 8.1 + Prom 502433 - 502492 8.1 503 249 Tu 1 . + CDS 502514 - 503515 1227 ## COG1087 UDP-glucose 4-epimerase + Prom 503562 - 503621 6.0 504 250 Tu 1 . + CDS 503646 - 504488 971 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 504496 - 504532 -0.9 + Prom 504497 - 504556 10.7 505 251 Op 1 . + CDS 504588 - 505274 452 ## STER_1325 hypothetical protein + Prom 505276 - 505335 9.1 506 251 Op 2 . + CDS 505367 - 505870 592 ## COG0778 Nitroreductase + Term 505898 - 505932 0.6 + Prom 505934 - 505993 3.8 507 252 Tu 1 . + CDS 506105 - 507307 916 ## COG3547 Transposase and inactivated derivatives + Prom 507622 - 507681 8.5 508 253 Op 1 40/0.000 + CDS 507787 - 508470 530 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 509 253 Op 2 . + CDS 508470 - 509345 545 ## COG0642 Signal transduction histidine kinase + Prom 509352 - 509411 10.7 510 254 Op 1 . + CDS 509503 - 509679 67 ## 511 254 Op 2 . + CDS 509701 - 510012 355 ## SSA_0301 hypothetical protein + Term 510024 - 510072 5.2 - Term 510012 - 510060 5.2 512 255 Op 1 . - CDS 510064 - 510819 875 ## SmuNN2025_0997 hypothetical protein 513 255 Op 2 . - CDS 510824 - 511744 270 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 511960 - 512019 6.9 + Prom 511888 - 511947 6.0 514 256 Op 1 . + CDS 511993 - 513285 1066 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 515 256 Op 2 . + CDS 513272 - 514135 837 ## COG4814 Uncharacterized protein with an alpha/beta hydrolase fold + Term 514187 - 514222 -0.5 516 257 Tu 1 . - CDS 514160 - 514351 97 ## gi|228477700|ref|ZP_04062329.1| hypothetical protein STRSA0001_1169 + Prom 514226 - 514285 10.1 517 258 Tu 1 . + CDS 514316 - 514765 458 ## COG1959 Predicted transcriptional regulator + Term 514787 - 514822 4.1 + Prom 514808 - 514867 6.4 518 259 Tu 1 . + CDS 514899 - 515759 872 ## COG2514 Predicted ring-cleavage extradiol dioxygenase + Prom 516278 - 516337 6.7 519 260 Tu 1 . + CDS 516407 - 517792 1581 ## COG0531 Amino acid transporters + Term 517796 - 517840 3.2 + Prom 518685 - 518744 8.0 520 261 Tu 1 . + CDS 518796 - 519056 344 ## SSA_0394 hypothetical protein + Term 519091 - 519128 1.4 - Term 519100 - 519155 5.3 521 262 Op 1 . - CDS 519179 - 519385 409 ## gi|301802249|emb|CBW35001.1| CsbD-like protein 522 262 Op 2 . - CDS 519452 - 520084 638 ## COG2323 Predicted membrane protein 523 262 Op 3 . - CDS 520081 - 520533 520 ## SGO_0380 hypothetical protein - Prom 520557 - 520616 6.6 + Prom 520710 - 520769 8.0 524 263 Tu 1 . + CDS 520907 - 521848 1118 ## COG1482 Phosphomannose isomerase + Term 521866 - 521911 -0.5 + Prom 521859 - 521918 6.6 525 264 Tu 1 . + CDS 522071 - 523399 1572 ## COG1114 Branched-chain amino acid permeases + Term 523408 - 523440 2.4 + Prom 523431 - 523490 2.3 526 265 Tu 1 . + CDS 523527 - 524477 964 ## COG0225 Peptide methionine sulfoxide reductase + Term 524512 - 524555 3.3 - Term 524790 - 524825 4.4 527 266 Tu 1 . - CDS 524833 - 526182 1364 ## COG0534 Na+-driven multidrug efflux pump - Prom 526297 - 526356 7.5 + Prom 526275 - 526334 6.4 528 267 Tu 1 . + CDS 526384 - 526770 338 ## CLI_0951 hypothetical protein + Term 526771 - 526833 12.1 - Term 526765 - 526811 8.2 529 268 Op 1 7/0.000 - CDS 526813 - 528090 396 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 530 268 Op 2 . - CDS 528090 - 528671 718 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 528751 - 528810 4.9 + Prom 529031 - 529090 6.7 531 269 Op 1 40/0.000 + CDS 529121 - 529801 648 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 532 269 Op 2 4/0.021 + CDS 529791 - 530765 718 ## COG0642 Signal transduction histidine kinase + Prom 530824 - 530883 3.7 533 270 Op 1 36/0.000 + CDS 530910 - 531668 301 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 534 270 Op 2 . + CDS 531670 - 533670 1487 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 533677 - 533715 5.0 + Prom 533672 - 533731 4.1 535 271 Tu 1 . + CDS 533755 - 534249 384 ## COG0727 Predicted Fe-S-cluster oxidoreductase + Prom 534271 - 534330 2.5 536 272 Tu 1 . + CDS 534393 - 534842 318 ## COG0295 Cytidine deaminase + Term 534859 - 534903 5.0 + Prom 534902 - 534961 6.7 537 273 Tu 1 . + CDS 534985 - 535923 1159 ## COG0385 Predicted Na+-dependent transporter + Term 535931 - 535968 1.3 + Prom 535933 - 535992 5.7 538 274 Op 1 . + CDS 536076 - 536285 292 ## STER_1295 hypothetical protein 539 274 Op 2 . + CDS 536296 - 536475 130 ## STER_1294 hypothetical protein 540 274 Op 3 45/0.000 + CDS 536468 - 537349 267 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 541 274 Op 4 6/0.000 + CDS 537346 - 538083 686 ## COG0842 ABC-type multidrug transport system, permease component 542 274 Op 5 19/0.000 + CDS 538076 - 539170 858 ## COG4585 Signal transduction histidine kinase 543 274 Op 6 . + CDS 539167 - 539769 761 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 539903 - 539938 2.8 + Prom 539891 - 539950 8.3 544 275 Op 1 5/0.010 + CDS 540123 - 541115 753 ## COG4586 ABC-type uncharacterized transport system, ATPase component 545 275 Op 2 3/0.031 + CDS 541117 - 541935 707 ## COG4587 ABC-type uncharacterized transport system, permease component 546 275 Op 3 . + CDS 541937 - 542722 445 ## COG3694 ABC-type uncharacterized transport system, permease component + Term 542917 - 542960 2.7 547 276 Tu 1 . + CDS 543461 - 549958 10174 ## PROTEIN SUPPORTED gi|148984022|ref|ZP_01817341.1| 50S ribosomal protein L1 + Prom 550019 - 550078 5.5 548 277 Tu 1 . + CDS 550163 - 550342 105 ## COG5263 FOG: Glucan-binding domain (YG repeat) + Term 550382 - 550416 -0.4 + Prom 550452 - 550511 10.0 549 278 Tu 1 . + CDS 550540 - 552519 2747 ## gi|241889237|ref|ZP_04776540.1| putative maebl + Prom 553096 - 553155 2.8 550 279 Tu 1 . + CDS 553193 - 553723 324 ## + Term 553798 - 553832 2.7 551 280 Tu 1 . - CDS 554155 - 555045 288 ## COG3464 Transposase and inactivated derivatives - Prom 555072 - 555131 3.1 552 281 Tu 1 . - CDS 555523 - 555744 285 ## - Prom 555814 - 555873 7.2 - Term 556645 - 556708 0.6 553 282 Tu 1 . - CDS 556728 - 556955 271 ## SMU.423 hypothetical protein - Prom 557086 - 557145 8.9 554 283 Op 1 . - CDS 557341 - 557712 238 ## COG2801 Transposase and inactivated derivatives 555 283 Op 2 . - CDS 557779 - 557952 150 ## Cbei_1398 integrase catalytic subunit - Prom 558177 - 558236 4.0 + Prom 558657 - 558716 8.7 556 284 Op 1 . + CDS 558895 - 559056 105 ## 557 284 Op 2 . + CDS 559060 - 559497 107 ## 558 284 Op 3 9/0.000 + CDS 559577 - 560383 665 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 559 284 Op 4 . + CDS 560395 - 561144 443 ## COG3279 Response regulator of the LytR/AlgR family + Term 561235 - 561283 8.5 - Term 561225 - 561269 2.2 560 285 Tu 1 . - CDS 561412 - 561675 146 ## - Prom 561779 - 561838 6.3 + Prom 561610 - 561669 7.5 561 286 Op 1 4/0.021 + CDS 561814 - 562725 662 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 562 286 Op 2 . + CDS 562727 - 563050 112 ## COG3512 Uncharacterized protein conserved in bacteria 563 286 Op 3 . + CDS 563047 - 564099 294 ## stu0660 hypothetical protein + Term 564109 - 564161 1.5 - Term 564533 - 564565 2.1 564 287 Op 1 7/0.000 - CDS 564569 - 565342 588 ## COG3689 Predicted membrane protein 565 287 Op 2 . - CDS 565384 - 566286 760 ## COG0701 Predicted permeases 566 287 Op 3 . - CDS 566292 - 566462 127 ## - Prom 566609 - 566668 3.2 + Prom 566606 - 566665 2.7 567 288 Tu 1 . + CDS 566703 - 568835 1601 ## PROTEIN SUPPORTED gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein + Term 568902 - 568937 1.0 568 289 Tu 1 . - CDS 568828 - 569025 167 ## - Prom 569268 - 569327 7.9 + Prom 569225 - 569284 5.5 569 290 Tu 1 . + CDS 569327 - 569590 336 ## COG1983 Putative stress-responsive transcriptional regulator + Term 569610 - 569657 11.2 + Prom 569631 - 569690 4.6 570 291 Op 1 10/0.000 + CDS 569718 - 570647 1200 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 571 291 Op 2 3/0.031 + CDS 570647 - 571438 868 ## COG0682 Prolipoprotein diacylglyceryltransferase 572 292 Op 1 . + CDS 571560 - 571958 610 ## COG4768 Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain 573 292 Op 2 . + CDS 571971 - 572411 744 ## STER_0722 hypothetical protein + Term 572444 - 572504 17.0 + Prom 572419 - 572478 3.9 574 293 Op 1 2/0.146 + CDS 572564 - 572788 113 ## COG3464 Transposase and inactivated derivatives 575 293 Op 2 . + CDS 572830 - 573552 342 ## COG3464 Transposase and inactivated derivatives - Term 573776 - 573810 5.3 576 294 Tu 1 . - CDS 573888 - 574184 387 ## str0670 hypothetical protein - Prom 574318 - 574377 9.3 + Prom 574274 - 574333 7.8 577 295 Op 1 13/0.000 + CDS 574422 - 575351 1026 ## COG0826 Collagenase and related proteases + Prom 575361 - 575420 2.4 578 295 Op 2 . + CDS 575447 - 576733 1322 ## COG0826 Collagenase and related proteases + Term 576815 - 576858 -0.9 - Term 577042 - 577091 7.1 579 296 Op 1 . - CDS 577096 - 577635 197 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 - Prom 577664 - 577723 8.0 580 296 Op 2 . - CDS 577731 - 578015 206 ## str0675 hypothetical protein - Prom 578038 - 578097 6.3 + Prom 577991 - 578050 7.6 581 297 Tu 1 . + CDS 578140 - 578352 341 ## COG4443 Uncharacterized protein conserved in bacteria + Term 578355 - 578393 6.0 - Term 578341 - 578379 3.0 582 298 Tu 1 . - CDS 578386 - 579720 1397 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 579881 - 579940 7.1 + Prom 579840 - 579899 7.1 583 299 Tu 1 . + CDS 580044 - 580223 204 ## str0678 hypothetical protein + Term 580224 - 580270 6.8 - Term 580216 - 580252 5.0 584 300 Tu 1 . - CDS 580260 - 580625 216 ## - Prom 580759 - 580818 4.2 - Term 580815 - 580852 3.3 585 301 Tu 1 . - CDS 580859 - 582349 2100 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 582529 - 582588 8.9 + Prom 582485 - 582544 7.2 586 302 Op 1 . + CDS 582577 - 583875 1192 ## STER_0734 hypothetical protein 587 302 Op 2 . + CDS 583889 - 584368 531 ## stu0695 hypothetical protein + Term 584395 - 584431 4.3 + Prom 584455 - 584514 7.1 588 303 Tu 1 . + CDS 584691 - 585593 981 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 585595 - 585632 7.3 - Term 586111 - 586144 2.0 589 304 Op 1 2/0.146 - CDS 586170 - 586808 657 ## COG0406 Fructose-2,6-bisphosphatase 590 304 Op 2 . - CDS 586811 - 587284 621 ## COG2606 Uncharacterized conserved protein - Prom 587319 - 587378 5.7 - Term 587365 - 587395 0.4 591 305 Tu 1 . - CDS 587399 - 588301 855 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) - Prom 588394 - 588453 3.8 592 306 Tu 1 . - CDS 588493 - 588882 370 ## str0700 hypothetical protein - Prom 588994 - 589053 6.9 + Prom 588898 - 588957 5.0 593 307 Op 1 4/0.021 + CDS 589034 - 589270 282 ## COG0561 Predicted hydrolases of the HAD superfamily 594 307 Op 2 . + CDS 589263 - 589877 746 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 589884 - 589920 4.0 595 308 Tu 1 . - CDS 589915 - 590541 589 ## str0701 hypothetical protein - Prom 590567 - 590626 6.9 + Prom 590526 - 590585 7.2 596 309 Op 1 . + CDS 590652 - 591809 688 ## GALLO_0904 hypothetical protein 597 309 Op 2 . + CDS 591841 - 592605 251 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 + Term 592611 - 592661 1.6 + Prom 592638 - 592697 8.9 598 310 Op 1 . + CDS 592726 - 595716 2379 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 599 310 Op 2 . + CDS 595752 - 596183 257 ## SmuNN2025_0531 hypothetical protein + Prom 596289 - 596348 2.6 600 311 Op 1 . + CDS 596408 - 596746 189 ## SmuNN2025_0531 hypothetical protein 601 311 Op 2 . + CDS 596752 - 598548 901 ## COG0433 Predicted ATPase + Prom 598621 - 598680 5.0 602 312 Op 1 . + CDS 598764 - 599942 470 ## SE0041 Abi-alpha protein 603 312 Op 2 . + CDS 599926 - 601155 714 ## COG0732 Restriction endonuclease S subunits 604 312 Op 3 . + CDS 601167 - 601754 252 ## STER_0751 hypothetical protein 605 312 Op 4 . + CDS 601782 - 602045 306 ## STER_0752 hypothetical protein 606 312 Op 5 . + CDS 602089 - 602319 112 ## STER_0752 hypothetical protein + Prom 602499 - 602558 4.5 607 313 Op 1 . + CDS 602578 - 604182 2088 ## COG0286 Type I restriction-modification system methyltransferase subunit + Term 604220 - 604250 1.2 608 313 Op 2 . + CDS 604260 - 605195 734 ## smi_0034 hypothetical protein + Term 605230 - 605259 0.5 + Prom 605360 - 605419 6.7 609 314 Tu 1 . + CDS 605446 - 606447 747 ## stu0713 deoxyribonuclease + Term 606455 - 606485 2.0 + Prom 606475 - 606534 5.1 610 315 Op 1 3/0.031 + CDS 606596 - 607156 741 ## COG1704 Uncharacterized conserved protein 611 315 Op 2 . + CDS 607158 - 608057 854 ## COG0501 Zn-dependent protease with chaperone function + Term 608061 - 608104 7.6 + Prom 608066 - 608125 8.5 612 316 Op 1 . + CDS 608175 - 608648 408 ## stu0716 hypothetical protein 613 316 Op 2 . + CDS 608645 - 609040 425 ## str0717 hypothetical protein + Prom 609043 - 609102 7.0 614 317 Op 1 . + CDS 609215 - 612037 2940 ## COG2352 Phosphoenolpyruvate carboxylase + Term 612044 - 612083 4.3 615 317 Op 2 2/0.146 + CDS 612105 - 613139 701 ## COG1466 DNA polymerase III, delta subunit + Term 613144 - 613200 12.7 + Prom 613152 - 613211 8.6 616 318 Op 1 . + CDS 613234 - 613839 922 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 613849 - 613880 1.8 617 318 Op 2 . + CDS 613881 - 615314 1404 ## stu0721 hypothetical protein + Term 615319 - 615357 5.5 - Term 615306 - 615347 1.7 618 319 Tu 1 . - CDS 615355 - 615861 115 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases - Prom 615991 - 616050 6.7 + Prom 616018 - 616077 7.0 619 320 Op 1 . + CDS 616111 - 616632 593 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Prom 616635 - 616694 8.6 620 320 Op 2 . + CDS 616721 - 617158 322 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 617163 - 617201 4.6 + Prom 617177 - 617236 4.3 621 321 Op 1 5/0.010 + CDS 617269 - 617475 184 ## COG4483 Uncharacterized protein conserved in bacteria 622 321 Op 2 . + CDS 617468 - 618436 1051 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase + Prom 618489 - 618548 8.8 623 322 Op 1 . + CDS 618575 - 620425 2261 ## COG1217 Predicted membrane GTPase involved in stress response 624 322 Op 2 . + CDS 620445 - 620717 265 ## str0730 hypothetical protein + Term 620730 - 620761 3.1 + Prom 620755 - 620814 8.0 625 323 Op 1 4/0.021 + CDS 620841 - 622193 1662 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 626 323 Op 2 3/0.031 + CDS 622197 - 623267 886 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 627 323 Op 3 25/0.000 + CDS 623277 - 624401 865 ## COG1589 Cell division septal protein + Term 624418 - 624453 3.1 + Prom 624403 - 624462 7.0 628 324 Op 1 35/0.000 + CDS 624526 - 625902 1486 ## COG0849 Actin-like ATPase involved in cell division 629 324 Op 2 4/0.021 + CDS 625931 - 627253 1501 ## COG0206 Cell division GTPase 630 324 Op 3 14/0.000 + CDS 627256 - 627939 472 ## COG0325 Predicted enzyme with a TIM-barrel fold 631 324 Op 4 12/0.000 + CDS 627944 - 628528 565 ## COG1799 Uncharacterized protein conserved in bacteria 632 324 Op 5 7/0.000 + CDS 628532 - 628789 177 ## COG0762 Predicted integral membrane protein + Prom 628796 - 628855 1.9 633 324 Op 6 6/0.000 + CDS 628896 - 629588 256 ## PROTEIN SUPPORTED gi|238927880|ref|ZP_04659640.1| ribosomal protein S4e + Term 629697 - 629727 0.4 + Prom 629638 - 629697 2.1 634 324 Op 7 6/0.000 + CDS 629772 - 630647 1123 ## COG3599 Cell division initiation protein + Term 630772 - 630807 0.2 + Prom 630707 - 630766 5.7 635 324 Op 8 . + CDS 630895 - 633693 3143 ## COG0060 Isoleucyl-tRNA synthetase + Term 633749 - 633783 5.3 - Term 633677 - 633723 2.1 636 325 Tu 1 . - CDS 633739 - 634995 502 ## COG3464 Transposase and inactivated derivatives - Prom 635230 - 635289 8.8 + Prom 635121 - 635180 6.8 637 326 Tu 1 . + CDS 635225 - 636487 1598 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 636490 - 636535 5.7 - Term 636567 - 636596 1.4 638 327 Tu 1 . - CDS 636616 - 636858 427 ## PROTEIN SUPPORTED gi|228477621|ref|ZP_04062254.1| ribosomal protein L31 - Prom 636888 - 636947 2.8 639 328 Op 1 . - CDS 636964 - 637896 737 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 640 328 Op 2 . - CDS 637883 - 638869 1101 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B 641 328 Op 3 . - CDS 638906 - 639694 914 ## COG0625 Glutathione S-transferase - Prom 639718 - 639777 5.3 + Prom 639759 - 639818 5.9 642 329 Tu 1 . + CDS 639867 - 640877 1107 ## COG1816 Adenosine deaminase + Prom 640978 - 641037 8.7 643 330 Op 1 3/0.031 + CDS 641062 - 641658 357 ## COG1435 Thymidine kinase 644 330 Op 2 32/0.000 + CDS 641695 - 642774 1426 ## COG0216 Protein chain release factor A 645 330 Op 3 10/0.000 + CDS 642771 - 643604 227 ## PROTEIN SUPPORTED gi|225082709|ref|YP_002653927.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 646 330 Op 4 1/0.344 + CDS 643591 - 644196 319 ## COG0009 Putative translation factor (SUA5) 647 330 Op 5 . + CDS 644291 - 645541 1713 ## COG0112 Glycine/serine hydroxymethyltransferase 648 330 Op 6 . + CDS 645548 - 646525 784 ## str0756 hypothetical protein 649 330 Op 7 1/0.344 + CDS 646527 - 647138 577 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 650 330 Op 8 35/0.000 + CDS 647170 - 648909 190 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 651 330 Op 9 . + CDS 648899 - 650647 189 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 650653 - 650682 0.5 + Prom 650728 - 650787 7.7 652 331 Op 1 . + CDS 650819 - 650950 61 ## str0760 component involved in D-alanylation of teichoic acids, putative 653 331 Op 2 6/0.000 + CDS 650959 - 652509 1755 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 654 331 Op 3 7/0.000 + CDS 652506 - 653756 1149 ## COG1696 Predicted membrane protein involved in D-alanine export 655 331 Op 4 6/0.000 + CDS 653770 - 654009 448 ## COG0236 Acyl carrier protein 656 331 Op 5 . + CDS 654002 - 655270 1265 ## COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) + Term 655271 - 655314 7.1 - Term 655353 - 655405 3.5 657 332 Op 1 . - CDS 655437 - 658073 2511 ## COG0474 Cation transport ATPase - Prom 658145 - 658204 5.5 658 332 Op 2 . - CDS 658235 - 659953 1105 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 660112 - 660171 9.7 + Prom 660017 - 660076 8.0 659 333 Tu 1 . + CDS 660102 - 660455 221 ## str0784 unknown protein, phage associated + Term 660471 - 660524 2.4 + Prom 660691 - 660750 8.0 660 334 Op 1 9/0.000 + CDS 660774 - 663023 3030 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 663064 - 663108 1.9 + Prom 663067 - 663126 4.8 661 334 Op 2 . + CDS 663207 - 664082 1024 ## COG0685 5,10-methylenetetrahydrofolate reductase + Term 664099 - 664137 6.2 - Term 664178 - 664212 6.2 662 335 Op 1 1/0.344 - CDS 664220 - 665938 2004 ## COG1109 Phosphomannomutase - Term 665974 - 666016 5.3 663 335 Op 2 3/0.031 - CDS 666018 - 666590 565 ## COG4684 Predicted membrane protein 664 335 Op 3 3/0.031 - CDS 666583 - 667146 505 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 665 335 Op 4 . - CDS 667139 - 667822 734 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 667892 - 667951 5.5 + Prom 667934 - 667993 7.5 666 336 Tu 1 . + CDS 668017 - 669687 2172 ## COG2759 Formyltetrahydrofolate synthetase + Term 669708 - 669737 -0.4 + Prom 669774 - 669833 5.1 667 337 Op 1 40/0.000 + CDS 669882 - 670556 786 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 668 337 Op 2 . + CDS 670648 - 671961 1064 ## COG0642 Signal transduction histidine kinase + Term 671970 - 672020 9.9 - Term 672012 - 672045 2.4 669 338 Op 1 2/0.146 - CDS 672048 - 672299 381 ## PROTEIN SUPPORTED gi|62510982|sp|Q5M080|RS20_STRT1 RecName: Full=30S ribosomal protein S20 gi|62510984|sp|Q5M4T9|RS20_STRT2 RecName: Full=30S ribosomal protein S20 gi|55736835|gb|AAV60477.1| 30S ribosomal protein S20 670 338 Op 2 . - CDS 672353 - 673273 531 ## COG1072 Panthothenate kinase - Prom 673342 - 673401 5.0 + Prom 673301 - 673360 8.0 671 339 Op 1 2/0.146 + CDS 673384 - 673974 584 ## COG2813 16S RNA G1207 methylase RsmC 672 339 Op 2 7/0.000 + CDS 673971 - 675233 1296 ## COG0213 Thymidine phosphorylase 673 339 Op 3 3/0.031 + CDS 675281 - 675943 771 ## COG0274 Deoxyribose-phosphate aldolase 674 339 Op 4 3/0.031 + CDS 675930 - 676328 162 ## COG0295 Cytidine deaminase 675 339 Op 5 15/0.000 + CDS 676390 - 677460 1287 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 677503 - 677563 10.0 + Prom 677481 - 677540 6.3 676 340 Op 1 24/0.000 + CDS 677574 - 679112 1535 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 677 340 Op 2 26/0.000 + CDS 679105 - 680172 1063 ## COG4603 ABC-type uncharacterized transport system, permease component 678 340 Op 3 . + CDS 680174 - 681130 1072 ## COG1079 Uncharacterized ABC-type transport system, permease component + Term 681154 - 681190 3.6 - Term 681146 - 681175 2.1 679 341 Tu 1 . - CDS 681238 - 681873 674 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 681984 - 682043 4.6 + Prom 681810 - 681869 6.6 680 342 Tu 1 . + CDS 681969 - 684455 1522 ## COG1199 Rad3-related DNA helicases + Prom 684499 - 684558 6.3 681 343 Op 1 5/0.010 + CDS 684600 - 685082 548 ## COG5353 Uncharacterized protein conserved in bacteria 682 343 Op 2 . + CDS 685087 - 685626 629 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 683 343 Op 3 5/0.010 + CDS 685623 - 686267 796 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 684 343 Op 4 . + CDS 686305 - 687651 1612 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 685 343 Op 5 . + CDS 687678 - 688085 440 ## stu0819 hypothetical protein + Term 688089 - 688133 7.7 + Prom 688112 - 688171 8.6 686 344 Tu 1 . + CDS 688194 - 688574 514 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 688576 - 688609 1.5 + Prom 688616 - 688675 3.1 687 345 Op 1 11/0.000 + CDS 688748 - 689401 581 ## COG0603 Predicted PP-loop superfamily ATPase 688 345 Op 2 22/0.000 + CDS 689401 - 689844 489 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 689 345 Op 3 2/0.146 + CDS 689837 - 690553 674 ## COG0602 Organic radical activating enzymes + Prom 690555 - 690614 7.1 690 346 Tu 1 . + CDS 690675 - 691166 595 ## COG0780 Enzyme related to GTP cyclohydrolase I + Prom 691243 - 691302 3.3 691 347 Op 1 . + CDS 691400 - 691558 126 ## 692 347 Op 2 . + CDS 691619 - 691876 61 ## gi|228477538|ref|ZP_04062171.1| SCP-like extracellular protein 693 348 Tu 1 . + CDS 692020 - 692274 245 ## SGO_0847 SCP-like extracellular protein + Term 692459 - 692497 -0.9 + Prom 692794 - 692853 4.5 694 349 Op 1 . + CDS 692873 - 693643 588 ## COG4420 Predicted membrane protein 695 349 Op 2 12/0.000 + CDS 693624 - 694514 714 ## COG1660 Predicted P-loop-containing kinase 696 349 Op 3 12/0.000 + CDS 694511 - 695485 763 ## COG0391 Uncharacterized conserved protein 697 349 Op 4 . + CDS 695482 - 696393 604 ## COG1481 Uncharacterized protein conserved in bacteria 698 349 Op 5 . + CDS 696411 - 697808 1370 ## COG4690 Dipeptidase + Term 697842 - 697894 14.3 699 350 Tu 1 . + CDS 698780 - 698998 190 ## COG2801 Transposase and inactivated derivatives - Term 698945 - 698989 8.3 700 351 Tu 1 . - CDS 699056 - 699877 788 ## COG2339 Predicted membrane protein - Prom 699964 - 700023 9.8 + Prom 699936 - 699995 14.2 701 352 Op 1 . + CDS 700034 - 701578 1395 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Prom 701590 - 701649 8.5 702 352 Op 2 . + CDS 701799 - 702197 440 ## str0861 hypothetical protein + Term 702298 - 702346 9.4 - Term 702286 - 702332 4.3 703 353 Op 1 . - CDS 702440 - 702637 80 ## COG3547 Transposase and inactivated derivatives 704 353 Op 2 . - CDS 702712 - 702888 82 ## str0744 truncated IS1193 transposase - Prom 703069 - 703128 9.7 + Prom 703220 - 703279 9.6 705 354 Op 1 . + CDS 703304 - 703792 582 ## 706 354 Op 2 . + CDS 703810 - 708492 5700 ## smi_1064 hypothetical protein + Term 708504 - 708543 2.1 707 355 Tu 1 . - CDS 708587 - 709843 518 ## COG3464 Transposase and inactivated derivatives - Prom 710013 - 710072 8.3 + Prom 710271 - 710330 8.6 708 356 Op 1 35/0.000 + CDS 710557 - 712293 175 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 709 356 Op 2 . + CDS 712306 - 714093 189 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 714098 - 714144 5.5 - Term 714145 - 714182 5.5 710 357 Tu 1 . - CDS 714193 - 715236 1057 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 715263 - 715322 7.3 + Prom 715222 - 715281 5.5 711 358 Tu 1 . + CDS 715358 - 716089 738 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 716124 - 716159 1.5 + Prom 716162 - 716221 8.1 712 359 Tu 1 . + CDS 716279 - 717262 967 ## COG1054 Predicted sulfurtransferase + Term 717273 - 717317 7.5 + Prom 717291 - 717350 11.7 713 360 Op 1 . + CDS 717380 - 718063 611 ## COG1814 Uncharacterized membrane protein + Term 718077 - 718112 3.5 + Prom 718065 - 718124 3.0 714 360 Op 2 . + CDS 718144 - 718863 573 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 718965 - 719009 1.7 + Prom 718986 - 719045 5.6 715 361 Tu 1 . + CDS 719109 - 720254 1239 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 720349 - 720379 -0.3 + Prom 720870 - 720929 9.2 716 362 Tu 1 . + CDS 721012 - 722328 487 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Term 722337 - 722363 -1.0 - Term 722318 - 722358 1.2 717 363 Tu 1 . - CDS 722579 - 722857 133 ## COG3575 Uncharacterized protein conserved in bacteria - Prom 722920 - 722979 3.9 + Prom 723125 - 723184 3.5 718 364 Op 1 5/0.010 + CDS 723405 - 724283 653 ## COG1577 Mevalonate kinase 719 364 Op 2 5/0.010 + CDS 724265 - 725209 785 ## COG3407 Mevalonate pyrophosphate decarboxylase 720 364 Op 3 3/0.031 + CDS 725202 - 726197 824 ## COG1577 Mevalonate kinase 721 364 Op 4 . + CDS 726245 - 727252 979 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases + Term 727350 - 727395 2.8 722 365 Tu 1 . + CDS 728019 - 730679 2580 ## COG0474 Cation transport ATPase + Term 730813 - 730852 -0.0 + Prom 730710 - 730769 6.2 723 366 Op 1 3/0.031 + CDS 730968 - 732350 1731 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 724 366 Op 2 . + CDS 732430 - 732978 693 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 725 366 Op 3 . + CDS 732982 - 733242 447 ## str0565 hypothetical protein 726 366 Op 4 . + CDS 733310 - 734002 972 ## COG0775 Nucleoside phosphorylase + Term 734053 - 734088 4.4 + Prom 734177 - 734236 5.0 727 367 Tu 1 . + CDS 734446 - 734685 150 ## COG1943 Transposase and inactivated derivatives + Term 734794 - 734835 6.5 + Prom 734796 - 734855 1.6 728 368 Op 1 25/0.000 + CDS 734918 - 735916 968 ## COG0438 Glycosyltransferase 729 368 Op 2 . + CDS 735917 - 737239 1169 ## COG0438 Glycosyltransferase + Term 737405 - 737438 -1.0 + Prom 737280 - 737339 7.9 730 369 Op 1 . + CDS 737572 - 737895 522 ## PROTEIN SUPPORTED gi|111657538|ref|ZP_01408279.1| hypothetical protein SpneT_02001260 731 369 Op 2 . + CDS 737951 - 739897 2759 ## COG0441 Threonyl-tRNA synthetase + Term 739902 - 739940 6.1 732 370 Tu 1 . + CDS 739979 - 740185 105 ## STER_0614 hypothetical protein 733 371 Tu 1 . + CDS 740323 - 740640 97 ## str0573 putative hydrolase + Prom 740716 - 740775 2.9 734 372 Tu 1 . + CDS 740978 - 741937 743 ## stu0574 hypothetical protein + Term 741942 - 742002 13.2 - Term 741933 - 741986 9.1 735 373 Op 1 . - CDS 742039 - 742200 180 ## COG1983 Putative stress-responsive transcriptional regulator 736 373 Op 2 . - CDS 742259 - 742936 788 ## COG1272 Predicted membrane protein, hemolysin III homolog 737 373 Op 3 . - CDS 742929 - 743378 377 ## GALLO_1261 hypothetical protein - Prom 743408 - 743467 7.5 - Term 743450 - 743502 7.8 738 374 Op 1 2/0.146 - CDS 743552 - 744823 1455 ## COG1257 Hydroxymethylglutaryl-CoA reductase 739 374 Op 2 . - CDS 744816 - 745991 1274 ## COG3425 3-hydroxy-3-methylglutaryl CoA synthase - Prom 746208 - 746267 8.9 + Prom 746180 - 746239 9.0 740 375 Op 1 16/0.000 + CDS 746314 - 747174 942 ## COG0207 Thymidylate synthase + Prom 747187 - 747246 4.4 741 375 Op 2 . + CDS 747338 - 747775 513 ## COG0262 Dihydrofolate reductase 742 375 Op 3 . + CDS 747780 - 747950 177 ## str0580 hypothetical protein 743 375 Op 4 4/0.021 + CDS 747968 - 749194 271 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 744 375 Op 5 . + CDS 749204 - 749803 659 ## COG0218 Predicted GTPase + Term 749807 - 749840 0.6 + Prom 749825 - 749884 3.9 745 376 Op 1 1/0.344 + CDS 749932 - 751308 1593 ## COG0833 Amino acid transporters 746 376 Op 2 . + CDS 751320 - 752270 845 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) + Term 752345 - 752373 -1.0 + Prom 752276 - 752335 3.2 747 377 Op 1 . + CDS 752383 - 752637 386 ## str0585 hypothetical protein 748 377 Op 2 . + CDS 752712 - 753062 478 ## stu0586 hypothetical protein + Term 753067 - 753113 5.3 - Term 753128 - 753162 5.3 749 378 Tu 1 . - CDS 753179 - 753820 604 ## COG0344 Predicted membrane protein - Prom 753979 - 754038 7.4 + Prom 753876 - 753935 5.8 750 379 Tu 1 . + CDS 753958 - 755907 2368 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 755975 - 756014 1.1 751 380 Tu 1 . - CDS 755904 - 756107 116 ## - Prom 756221 - 756280 3.0 752 381 Tu 1 . + CDS 756426 - 758846 3085 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 758848 - 758904 8.0 + Prom 758924 - 758983 4.7 753 382 Tu 1 . + CDS 759012 - 760034 1299 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 760063 - 760090 0.1 + Prom 760047 - 760106 7.1 754 383 Tu 1 . + CDS 760153 - 760383 321 ## str0591 hypothetical protein + Term 760410 - 760448 -0.4 + TRNA 760444 - 760524 66.4 # Tyr GTA 0 0 + TRNA 760593 - 760667 65.2 # Gln TTG 0 0 + Prom 760446 - 760505 80.3 755 384 Tu 1 . + CDS 760734 - 761987 2034 ## PROTEIN SUPPORTED gi|55736656|gb|AAV60298.1| 30S ribosomal protein S1 + Term 761988 - 762035 5.2 + TRNA 762055 - 762126 53.2 # Arg CCG 0 0 + Prom 762702 - 762761 1.8 756 385 Tu 1 . + CDS 762815 - 763435 538 ## SUB1007 lipoprotein + Term 763442 - 763491 4.3 + Prom 763466 - 763525 8.6 757 386 Op 1 . + CDS 763698 - 764189 342 ## str0595 hypothetical protein 758 386 Op 2 . + CDS 764167 - 765402 1457 ## COG2348 Uncharacterized protein involved in methicillin resistance + Term 765409 - 765443 3.1 + Prom 765404 - 765463 4.1 759 386 Op 3 . + CDS 765502 - 766464 950 ## COG0673 Predicted dehydrogenases and related proteins + Term 766470 - 766507 7.8 - Term 766457 - 766495 4.2 760 387 Op 1 . - CDS 766504 - 766806 434 ## str0600 hypothetical protein 761 387 Op 2 1/0.344 - CDS 766803 - 767267 616 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 767289 - 767348 3.2 - Term 767366 - 767404 6.4 762 388 Tu 1 . - CDS 767410 - 769680 1651 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 769868 - 769927 10.9 + Prom 769834 - 769893 8.4 763 389 Op 1 . + CDS 769922 - 770902 1072 ## COG0078 Ornithine carbamoyltransferase 764 389 Op 2 1/0.344 + CDS 770971 - 771201 329 ## COG4703 Uncharacterized protein conserved in bacteria + Term 771244 - 771282 4.1 + Prom 771331 - 771390 9.4 765 390 Op 1 34/0.000 + CDS 771469 - 772149 845 ## COG0765 ABC-type amino acid transport system, permease component 766 390 Op 2 . + CDS 772149 - 772883 658 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 772915 - 772951 5.0 + Prom 772966 - 773025 7.9 767 391 Op 1 22/0.000 + CDS 773056 - 773532 458 ## COG1918 Fe2+ transport system protein A 768 391 Op 2 . + CDS 773529 - 775667 1940 ## COG0370 Fe2+ transport system protein B 769 391 Op 3 . + CDS 775685 - 775825 62 ## STER_0655 hypothetical protein + Term 775836 - 775883 4.3 + Prom 775829 - 775888 4.6 770 392 Tu 1 . + CDS 775973 - 776188 219 ## str0609 hypothetical protein + Prom 776796 - 776855 4.6 771 393 Op 1 . + CDS 776878 - 777732 982 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 772 393 Op 2 . + CDS 777736 - 778221 335 ## COG0063 Predicted sugar kinase 773 393 Op 3 . + CDS 778146 - 778571 165 ## PROTEIN SUPPORTED gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 + Term 778583 - 778611 -0.0 + Prom 778604 - 778663 9.6 774 394 Tu 1 . + CDS 778693 - 780807 2307 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 780818 - 780854 4.1 775 395 Tu 1 . - CDS 780736 - 780918 61 ## - Prom 781103 - 781162 3.3 + Prom 780809 - 780868 3.8 776 396 Tu 1 . + CDS 780917 - 781513 663 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 781520 - 781550 1.1 + Prom 781522 - 781581 4.3 777 397 Tu 1 . + CDS 781616 - 782452 718 ## COG3711 Transcriptional antiterminator + Prom 782479 - 782538 4.8 778 398 Op 1 11/0.000 + CDS 782784 - 783170 438 ## COG0319 Predicted metal-dependent hydrolase 779 398 Op 2 3/0.031 + CDS 783151 - 783555 393 ## COG0818 Diacylglycerol kinase 780 398 Op 3 1/0.344 + CDS 783574 - 784473 1131 ## COG1159 GTPase + Term 784479 - 784508 0.3 781 398 Op 4 4/0.021 + CDS 784520 - 785341 374 ## COG0266 Formamidopyrimidine-DNA glycosylase 782 398 Op 5 2/0.146 + CDS 785338 - 785931 420 ## COG0237 Dephospho-CoA kinase + Prom 785979 - 786038 5.3 783 399 Op 1 . + CDS 786087 - 787205 833 ## COG0477 Permeases of the major facilitator superfamily 784 399 Op 2 . + CDS 787195 - 787341 243 ## PROTEIN SUPPORTED gi|55820702|ref|YP_139144.1| 50S ribosomal protein L33 785 399 Op 3 6/0.000 + CDS 787387 - 787623 348 ## COG1314 Preprotein translocase subunit SecG + Term 787624 - 787657 2.2 786 399 Op 4 10/0.000 + CDS 787686 - 790139 1375 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 787 399 Op 5 . + CDS 790161 - 790625 529 ## COG0691 tmRNA-binding protein + Term 790634 - 790676 8.0 + Prom 790644 - 790703 6.8 788 400 Op 1 3/0.031 + CDS 790780 - 792186 1596 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 789 400 Op 2 . + CDS 792188 - 792466 387 ## PROTEIN SUPPORTED gi|55820707|ref|YP_139149.1| hypothetical protein stu0628 790 400 Op 3 . + CDS 792421 - 792552 237 ## PROTEIN SUPPORTED gi|55820707|ref|YP_139149.1| hypothetical protein stu0628 + Term 792554 - 792603 8.1 - Term 792604 - 792645 5.2 791 401 Tu 1 . - CDS 792654 - 793739 1253 ## COG0006 Xaa-Pro aminopeptidase - Prom 793900 - 793959 5.2 + Prom 793956 - 794015 8.1 792 402 Op 1 . + CDS 794054 - 795055 1023 ## COG1609 Transcriptional regulators + Term 795060 - 795101 6.4 793 402 Op 2 . + CDS 795115 - 796182 909 ## COG2315 Uncharacterized protein conserved in bacteria 794 402 Op 3 . + CDS 796195 - 796515 216 ## COG1929 Glycerate kinase 795 402 Op 4 . + CDS 796455 - 797309 844 ## COG1929 Glycerate kinase + Term 797315 - 797357 4.9 796 403 Tu 1 . - CDS 797341 - 797799 424 ## COG5506 Uncharacterized conserved protein - Prom 797821 - 797880 7.4 + Prom 797912 - 797971 5.9 797 404 Tu 1 . + CDS 798005 - 799303 1821 ## COG0148 Enolase + Term 799369 - 799403 5.3 - Term 799210 - 799251 -0.5 798 405 Tu 1 . - CDS 799359 - 800615 542 ## COG3464 Transposase and inactivated derivatives - Prom 800730 - 800789 4.2 + Prom 801055 - 801114 5.3 799 406 Tu 1 . + CDS 801149 - 801532 251 ## COG2314 Predicted membrane protein - Term 801849 - 801896 9.1 800 407 Op 1 . - CDS 801900 - 802049 107 ## STER_0685 hypothetical protein - Prom 802112 - 802171 2.9 - Term 802213 - 802246 4.1 801 407 Op 2 . - CDS 802256 - 804292 1820 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 804464 - 804523 8.1 + Prom 804409 - 804468 5.3 802 408 Op 1 2/0.146 + CDS 804597 - 805760 273 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 803 408 Op 2 8/0.000 + CDS 805757 - 806434 857 ## COG0710 3-dehydroquinate dehydratase 804 408 Op 3 7/0.000 + CDS 806424 - 807281 853 ## COG0169 Shikimate 5-dehydrogenase 805 408 Op 4 7/0.000 + CDS 807294 - 808361 1298 ## COG0337 3-dehydroquinate synthetase 806 408 Op 5 1/0.344 + CDS 808362 - 809528 1354 ## COG0082 Chorismate synthase 807 408 Op 6 1/0.344 + CDS 809558 - 810664 1210 ## COG0287 Prephenate dehydrogenase 808 408 Op 7 . + CDS 810674 - 811012 516 ## COG3679 Uncharacterized conserved protein + Term 811018 - 811055 0.8 809 408 Op 8 . + CDS 811102 - 812052 986 ## COG0039 Malate/lactate dehydrogenases + Term 812072 - 812125 5.0 + Prom 812054 - 812113 4.7 810 409 Op 1 5/0.010 + CDS 812133 - 813416 1549 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 811 409 Op 2 2/0.146 + CDS 813409 - 813900 438 ## COG0703 Shikimate kinase 812 409 Op 3 1/0.344 + CDS 813891 - 814715 853 ## COG0077 Prephenate dehydratase 813 409 Op 4 . + CDS 814727 - 816148 1225 ## COG1316 Transcriptional regulator + Term 816154 - 816192 4.1 814 410 Op 1 . - CDS 816163 - 817101 854 ## COG1275 Tellurite resistance protein and related permeases 815 410 Op 2 4/0.021 - CDS 817118 - 818182 1282 ## COG1960 Acyl-CoA dehydrogenases 816 410 Op 3 . - CDS 818229 - 818777 860 ## COG2128 Uncharacterized conserved protein - Prom 818842 - 818901 6.7 + Prom 818875 - 818934 4.5 817 411 Tu 1 . + CDS 818991 - 820352 1583 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Term 820512 - 820551 6.1 + Prom 820474 - 820533 6.8 818 412 Op 1 . + CDS 820562 - 820735 165 ## SSUBM407_0456 hypothetical protein 819 412 Op 2 . + CDS 820732 - 821556 619 ## SUB0789 replication initiator protein 820 412 Op 3 . + CDS 821558 - 821782 85 ## 821 412 Op 4 . + CDS 821715 - 823070 529 ## COG0270 Site-specific DNA methylase 822 412 Op 5 . + CDS 823054 - 823482 152 ## gbs1369 hypothetical protein 823 412 Op 6 . + CDS 823492 - 823875 164 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family 824 412 Op 7 . + CDS 823885 - 824118 213 ## SZO_17960 hypothetical protein 825 412 Op 8 . + CDS 824121 - 824702 236 ## COG1266 Predicted metal-dependent membrane protease + Term 824715 - 824753 8.6 826 413 Op 1 . + CDS 824764 - 825267 573 ## SZO_17940 hypothetical protein 827 413 Op 2 . + CDS 825267 - 827087 1496 ## COG3505 Type IV secretory pathway, VirD4 components 828 413 Op 3 . + CDS 827105 - 827347 478 ## SSU98_0986 hypothetical protein 829 413 Op 4 . + CDS 827364 - 828218 724 ## SZO_17900 membrane protein + Term 828220 - 828263 7.5 830 414 Op 1 . + CDS 828280 - 828633 286 ## SSU05_0970 hypothetical protein 831 414 Op 2 . + CDS 828611 - 830947 1605 ## COG3451 Type IV secretory pathway, VirB4 components 832 414 Op 3 . + CDS 830937 - 833069 1727 ## SSUBM407_0946 hypothetical protein 833 414 Op 4 . + CDS 833087 - 833740 435 ## COG3942 Surface antigen 834 414 Op 5 . + CDS 833806 - 834408 319 ## SP70585_1084 hypothetical protein 835 414 Op 6 . + CDS 834411 - 835409 714 ## Apre_1821 hypothetical protein + Term 835432 - 835468 3.1 + Prom 835413 - 835472 6.4 836 415 Tu 1 . + CDS 835621 - 836085 441 ## COG1943 Transposase and inactivated derivatives + Term 836149 - 836184 3.6 + Prom 836203 - 836262 3.2 837 416 Op 1 . + CDS 836329 - 841233 3989 ## SAG1283 agglutinin receptor 838 416 Op 2 . + CDS 841234 - 841425 233 ## gbs1355 hypothetical protein 839 416 Op 3 . + CDS 841409 - 841960 489 ## SZO_17790 hypothetical protein + Term 841967 - 842003 4.0 840 417 Op 1 . + CDS 842011 - 846006 3301 ## COG0827 Adenine-specific DNA methylase 841 417 Op 2 . + CDS 846037 - 848832 2146 ## COG4646 DNA methylase 842 417 Op 3 . + CDS 848903 - 849202 436 ## SZO_17750 hypothetical protein 843 417 Op 4 . + CDS 849218 - 849508 350 ## SZO_17740 membrane protein + Term 849515 - 849551 5.0 + Prom 849556 - 849615 6.2 844 418 Op 1 . + CDS 849733 - 851748 860 ## SSUBM407_0401 membrane protein + Prom 851752 - 851811 4.1 845 418 Op 2 . + CDS 851832 - 852308 282 ## + Term 852348 - 852384 5.0 + Prom 852310 - 852369 4.0 846 419 Op 1 . + CDS 852449 - 853087 610 ## SZO_17680 hypothetical protein 847 419 Op 2 . + CDS 853127 - 854215 534 ## gbs1348 hypothetical protein 848 419 Op 3 . + CDS 854269 - 854493 319 ## SZO_17650 hypothetical protein 849 419 Op 4 . + CDS 854497 - 854892 434 ## SZO_17640 hypothetical protein + Term 854899 - 854931 1.1 850 419 Op 5 . + CDS 854937 - 855221 115 ## SZO_17630 hypothetical protein + Term 855222 - 855251 2.1 851 420 Op 1 . + CDS 855291 - 855767 483 ## COG1396 Predicted transcriptional regulators 852 420 Op 2 . + CDS 855821 - 856444 312 ## gbs1343 hypothetical protein + Prom 856472 - 856531 1.7 853 421 Op 1 2/0.146 + CDS 856551 - 858809 1330 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family 854 421 Op 2 . + CDS 858813 - 859769 537 ## COG0210 Superfamily I DNA and RNA helicases + Prom 859853 - 859912 8.9 855 422 Tu 1 . + CDS 859967 - 860830 350 ## gbs1341 hypothetical protein + Term 860844 - 860873 1.4 + Prom 860868 - 860927 3.9 856 423 Op 1 . + CDS 861163 - 861522 360 ## SPP_1056 hypothetical protein 857 423 Op 2 . + CDS 861532 - 861897 321 ## SZO_17590 mobilisation protein 858 423 Op 3 . + CDS 861884 - 863749 1005 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) + Term 863865 - 863903 4.4 + Prom 864104 - 864163 8.4 859 424 Tu 1 . + CDS 864355 - 864483 105 ## SP70585_1297 hypothetical protein + Term 864522 - 864582 9.1 + Prom 864506 - 864565 6.3 860 425 Op 1 . + CDS 864597 - 865103 27 ## SSU98_0918 putative asparagine synthetase 861 425 Op 2 . + CDS 865178 - 865702 318 ## SSU98_0918 putative asparagine synthetase + Prom 865779 - 865838 4.2 862 426 Op 1 . + CDS 865876 - 866331 209 ## SSU05_0912 putative asparagine synthetase 863 426 Op 2 . + CDS 866334 - 866585 159 ## SSUSC84_0816 hypothetical protein 864 426 Op 3 1/0.344 + CDS 866589 - 868811 276 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 865 426 Op 4 . + CDS 868824 - 869540 265 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 866 426 Op 5 . + CDS 869530 - 870321 195 ## SSUBM407_0997 membrane protein 867 426 Op 6 . + CDS 870362 - 870607 193 ## SP70585_1291 hypothetical protein + Term 870733 - 870770 1.1 + Prom 870652 - 870711 7.0 868 427 Tu 1 . + CDS 870802 - 871023 115 ## SSUSC84_0812 membrane protein 869 428 Tu 1 . - CDS 871052 - 871261 60 ## - Prom 871499 - 871558 7.5 + Prom 871125 - 871184 3.4 870 429 Op 1 40/0.000 + CDS 871227 - 871736 270 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 871 429 Op 2 . + CDS 871721 - 872818 288 ## COG0642 Signal transduction histidine kinase + Term 872960 - 873009 -0.7 + Prom 872911 - 872970 6.7 872 430 Tu 1 . + CDS 873146 - 873367 231 ## COG1396 Predicted transcriptional regulators 873 431 Op 1 . + CDS 873826 - 874962 341 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 874 431 Op 2 . + CDS 874989 - 875642 492 ## SPCG_1217 resolvase family site-specific recombinase + Term 875882 - 875917 2.0 + Prom 875965 - 876024 7.4 875 432 Op 1 . + CDS 876242 - 876694 148 ## COG0428 Predicted divalent heavy-metal cations transporter 876 432 Op 2 . + CDS 876695 - 877042 303 ## COG0428 Predicted divalent heavy-metal cations transporter 877 432 Op 3 5/0.010 + CDS 877057 - 877419 323 ## COG0640 Predicted transcriptional regulators 878 432 Op 4 1/0.344 + CDS 877403 - 879490 1537 ## COG2217 Cation transport ATPase 879 433 Op 1 . + CDS 879705 - 880478 643 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 880 433 Op 2 . + CDS 880491 - 880931 234 ## LCRIS_00065 acetyltransferase + Term 881000 - 881038 5.2 881 434 Op 1 . - CDS 880992 - 881207 104 ## COG3464 Transposase and inactivated derivatives - Term 881222 - 881259 7.1 882 434 Op 2 . - CDS 881283 - 882455 843 ## COG2807 Cyanate permease - Prom 882601 - 882660 8.2 - Term 882634 - 882670 2.4 883 435 Tu 1 . - CDS 882685 - 883527 926 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 883579 - 883638 5.4 + Prom 883535 - 883594 8.2 884 436 Op 1 . + CDS 883654 - 884223 381 ## COG1309 Transcriptional regulator 885 436 Op 2 . + CDS 884258 - 884893 707 ## COG3142 Uncharacterized protein involved in copper resistance + Prom 884932 - 884991 4.2 886 437 Tu 1 . + CDS 885017 - 885289 218 ## gi|228478168|ref|ZP_04062776.1| hypothetical protein STRSA0001_0769 + Prom 885325 - 885384 4.3 887 438 Tu 1 . + CDS 885408 - 886646 956 ## LSA0827 lipoprotein precursor + Term 886687 - 886722 1.9 888 439 Tu 1 . + CDS 886781 - 887620 601 ## SGO_1347 membrane associated lipoprotein + Prom 887679 - 887738 8.9 889 440 Tu 1 . + CDS 887762 - 888073 380 ## SSA_1453 hypothetical protein - Term 888075 - 888112 4.1 890 441 Op 1 . - CDS 888125 - 888364 211 ## gi|228478267|ref|ZP_04062875.1| conserved hypothetical protein 891 441 Op 2 . - CDS 888414 - 888833 491 ## spr0179 hypothetical protein - Prom 888856 - 888915 6.6 892 442 Tu 1 . - CDS 889502 - 889747 137 ## gi|228478314|ref|ZP_04062922.1| hypothetical protein STRSA0001_0740 - Prom 889967 - 890026 2.4 893 443 Tu 1 . + CDS 889763 - 890062 235 ## gi|228478208|ref|ZP_04062816.1| conserved hypothetical protein + Prom 890107 - 890166 2.2 894 444 Tu 1 . + CDS 890197 - 890811 503 ## stu0656 hypothetical protein + Term 890846 - 890877 1.0 + Prom 890983 - 891042 6.0 895 445 Op 1 . + CDS 891065 - 891358 263 ## STER_0709 CRISPR-system-like protein 896 445 Op 2 . + CDS 891396 - 894464 2206 ## COG3513 Uncharacterized protein conserved in bacteria + Term 894517 - 894550 3.1 - Term 894578 - 894614 3.5 897 446 Op 1 2/0.146 - CDS 894625 - 894990 96 ## COG3464 Transposase and inactivated derivatives 898 446 Op 2 . - CDS 894974 - 895168 82 ## COG3464 Transposase and inactivated derivatives - Prom 895326 - 895385 5.7 - Term 895505 - 895535 4.3 899 447 Op 1 9/0.000 - CDS 895556 - 896425 1096 ## COG1760 L-serine deaminase 900 447 Op 2 . - CDS 896438 - 897109 563 ## COG1760 L-serine deaminase - Prom 897192 - 897251 7.2 + Prom 897191 - 897250 6.6 901 448 Op 1 . + CDS 897389 - 898084 792 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 898106 - 898137 1.1 902 448 Op 2 . + CDS 898144 - 899928 1655 ## COG0322 Nuclease subunit of the excinuclease complex 903 449 Tu 1 . + CDS 900292 - 900573 109 ## COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives 904 450 Tu 1 . - CDS 900594 - 900866 238 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Prom 900891 - 900950 9.9 + Prom 901484 - 901543 9.8 905 451 Op 1 . + CDS 901692 - 903137 1217 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Term 903156 - 903182 -0.6 + Prom 903139 - 903198 8.2 906 451 Op 2 . + CDS 903218 - 903730 592 ## COG1247 Sortase and related acyltransferases 907 452 Op 1 . + CDS 904076 - 905434 1139 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes 908 452 Op 2 . + CDS 905450 - 906103 367 ## COG4912 Predicted DNA alkylation repair enzyme + Term 906165 - 906191 -1.0 + Prom 906298 - 906357 4.3 909 453 Tu 1 . + CDS 906398 - 907474 1378 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 907701 - 907744 4.0 910 454 Tu 1 . + CDS 907856 - 908791 1160 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Term 908874 - 908911 1.0 + Prom 908861 - 908920 8.6 911 455 Op 1 6/0.000 + CDS 908948 - 909637 847 ## COG0571 dsRNA-specific ribonuclease 912 455 Op 2 1/0.344 + CDS 909640 - 911223 1604 ## COG1196 Chromosome segregation ATPases 913 455 Op 3 . + CDS 911262 - 913172 2129 ## COG1196 Chromosome segregation ATPases + Term 913196 - 913232 0.8 + Prom 913177 - 913236 7.7 914 456 Op 1 . + CDS 913476 - 913712 122 ## 915 456 Op 2 2/0.146 + CDS 913682 - 914725 1314 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 916 456 Op 3 1/0.344 + CDS 914742 - 915260 459 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 915412 - 915455 0.7 + Prom 915300 - 915359 2.4 917 457 Tu 1 . + CDS 915489 - 917897 2736 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit + Term 917901 - 917945 6.1 + Prom 917913 - 917972 4.6 918 458 Op 1 . + CDS 918137 - 918547 255 ## str1290 hypothetical protein + Prom 918556 - 918615 5.9 919 458 Op 2 . + CDS 918638 - 918976 455 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 918977 - 919020 2.0 920 459 Tu 1 . - CDS 919020 - 920285 881 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 920373 - 920432 5.3 + Prom 920332 - 920391 5.9 921 460 Tu 1 . + CDS 920445 - 920975 674 ## STER_1263 hypothetical protein + Term 920983 - 921016 3.1 + Prom 921028 - 921087 6.2 922 461 Op 1 . + CDS 921114 - 921623 669 ## str1285 hypothetical protein 923 461 Op 2 1/0.344 + CDS 921624 - 922481 752 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 924 461 Op 3 1/0.344 + CDS 922471 - 923001 447 ## COG4720 Predicted membrane protein + Term 923009 - 923037 -1.0 + Prom 923030 - 923089 6.4 925 462 Tu 1 . + CDS 923140 - 924678 1483 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 924901 - 924960 5.1 926 463 Tu 1 . + CDS 924994 - 926367 1662 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 926375 - 926410 5.3 - Term 926405 - 926443 4.4 927 464 Tu 1 . - CDS 926460 - 927446 1238 ## COG0039 Malate/lactate dehydrogenases - Prom 927489 - 927548 5.7 + Prom 927448 - 927507 5.7 928 465 Op 1 2/0.146 + CDS 927667 - 930135 2522 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 929 465 Op 2 1/0.344 + CDS 930135 - 930896 670 ## COG3764 Sortase (surface protein transpeptidase) 930 465 Op 3 . + CDS 930921 - 931334 333 ## COG0346 Lactoylglutathione lyase and related lyases + Prom 931338 - 931397 3.0 931 466 Tu 1 . + CDS 931448 - 932416 896 ## COG4086 Predicted secreted protein + Term 932418 - 932460 5.0 932 467 Tu 1 . - CDS 932619 - 932807 115 ## - Term 933514 - 933559 9.4 933 468 Tu 1 . - CDS 933564 - 935048 843 ## spr1404 hypothetical protein - Prom 935204 - 935263 7.4 + Prom 935098 - 935157 8.0 934 469 Tu 1 . + CDS 935266 - 941733 8054 ## COG5295 Autotransporter adhesin + Term 941932 - 941966 5.3 - Term 941500 - 941530 2.0 935 470 Op 1 . - CDS 941734 - 941928 137 ## 936 470 Op 2 . - CDS 941922 - 942719 433 ## COG3464 Transposase and inactivated derivatives - Prom 942764 - 942823 1.5 Predicted protein(s) >gi|311100538|gb|AEKO01000007.1| GENE 1 3258 - 3593 366 111 aa, chain + ## HITS:1 COG:SPy1971 KEGG:ns NR:ns ## COG: SPy1971 COG0526 # Protein_GI_number: 15675765 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pyogenes M1 GAS # 8 111 19 122 124 94 46.0 7e-20 MSIFASAFTPISVSSAKENIASAEKFILFIGRSSCPYCQRFEPKLSNVARKSEFNIFYIN SENSDELGEIQALRKRYGIATVPALFVSEKGAAKVVCDSSLSEEDILDFIS >gi|311100538|gb|AEKO01000007.1| GENE 2 4029 - 4277 97 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477986|ref|ZP_04062597.1| ## NR: gi|228477986|ref|ZP_04062597.1| putative transposase [Streptococcus salivarius SK126] # 1 47 184 230 241 75 76.0 1e-12 MEDKVALTLACLNIKKLVKMIAGKTYNYTQISQYYWIIGELGKNIKKTNIKNDVCLHSQK IKIDFLFYYKIDCSFKNLKNAG >gi|311100538|gb|AEKO01000007.1| GENE 3 4879 - 5154 70 91 aa, chain - ## HITS:1 COG:SPy2013 KEGG:ns NR:ns ## COG: SPy2013 COG3666 # Protein_GI_number: 15675797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 6 88 135 218 401 101 64.0 3e-22 MLHHVLEAGLIDPSEIFIDGTHIKATANNHNYKTVVDQKAKFMSEQLETEINLDRRKHVK KFLKPAKKGEAKPKKQSTTNPDSGLFHKEGT >gi|311100538|gb|AEKO01000007.1| GENE 4 5263 - 5550 108 95 aa, chain - ## HITS:1 COG:SPy2013 KEGG:ns NR:ns ## COG: SPy2013 COG3666 # Protein_GI_number: 15675797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 10 95 7 92 401 158 84.0 3e-39 MRCSYVSHPPEYNRHQVGFYTLDELVPKDHFLRKVEETIDFSFIYDLVEDSYSSDNGRPS LDPVLLVKIPLIQCFYGIRSMRQTIKNIEVNTAYR >gi|311100538|gb|AEKO01000007.1| GENE 5 5661 - 6443 641 260 aa, chain - ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 5 258 9 261 266 216 43.0 3e-56 MDKDAMITYLIGELKKENLELHDLIVPEELEEKQKLLRALFNTRKPMAASTQFLTIQDLY LQVRKGERGIVQLNSLQSIPQDKRIYLWKGDITRLEVDAIVNAANKTLLGCMKPLHNCVD NAIHTYAGVQLRQACFELILEQGYEEPVGMAKITPAYNLPSAFVIHTVGPKIENQLTPIY EDLLVKSYLSVLALAEKNNIESISIPCISTGDFKFPKQKAAEIAIKTVKTFIDYSDIVKK VIFNVFDDENLNIYQDLLAE >gi|311100538|gb|AEKO01000007.1| GENE 6 6639 - 6953 414 104 aa, chain + ## HITS:1 COG:SP1776 KEGG:ns NR:ns ## COG: SP1776 COG0526 # Protein_GI_number: 15901605 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 104 104 165 79.0 2e-41 MTQVVTDSTFEQETAEGLVLIDFWATWCGPCLMQAPILEQLSEEISEDELKIVKLDVDEN PETAQKFGIMSIPTLLFKKDGEVVKQVAGVHTKEQIKAIVAELS >gi|311100538|gb|AEKO01000007.1| GENE 7 7014 - 7445 345 143 aa, chain + ## HITS:1 COG:SPy0186 KEGG:ns NR:ns ## COG: SPy0186 COG1832 # Protein_GI_number: 15674391 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 141 1 141 151 198 68.0 3e-51 MSYSFQNPSAEVIESYLKSAKTIAIVGLSHRKEAASYQVAHFLQAAGYRIIPVNPKLEGQ ELLGEHVYAYLKDIPFSVDIVDVFRRSEYLPDVAYDFLETKDKVFWSQIGLENEEAETIL RQANRQDIVMNRCTKIEYMRLFV >gi|311100538|gb|AEKO01000007.1| GENE 8 7499 - 8275 643 258 aa, chain + ## HITS:1 COG:SPy0260 KEGG:ns NR:ns ## COG: SPy0260 COG0084 # Protein_GI_number: 15674440 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Streptococcus pyogenes M1 GAS # 2 257 19 274 274 391 73.0 1e-109 MIRIFDTHTHLNVDNFAGKEQEEVNFAAELGVVKMNIVGFDKATIKKSLALSEQYDQLYS TIGWHPTEAGSYSQEIEDMIVSQLGNPNVVALGEIGLDYYWMEDSKEVQIEVFKRQIGLS KEYNLPFVVHTRDALEDTYAVIKEVGVGPRGGIMHSYSGSLEMAQKFVELGMMISFSGVV TFKKALDVQEAAQYLPLDKILVETDAPYLAPVPKRGRENRTGYTRYVVDKIAELRGLTSE EVARVTYDNAMRIFGLNE >gi|311100538|gb|AEKO01000007.1| GENE 9 8268 - 8828 423 186 aa, chain + ## HITS:1 COG:SPy0261 KEGG:ns NR:ns ## COG: SPy0261 COG1658 # Protein_GI_number: 15674441 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Streptococcus pyogenes M1 GAS # 3 186 4 187 189 278 80.0 3e-75 MSKIKIQEVIVVEGKDDTANLRRFYEVDTYETRGSAINEDDLERIDKLNKLRGVIVFTDP DYNGERIRKIIMEAVPTAKHAFLNRGEASPKSKTRGRSLGVEHANFEDIQKALAGVLGSY DDDNQFDISKSDLVKLGLLMGSDSRKRREYLGEAFRIGYCNGKQLLKRLELFGITLEELE EVMEKY >gi|311100538|gb|AEKO01000007.1| GENE 10 8972 - 9844 921 290 aa, chain + ## HITS:1 COG:SPy0262 KEGG:ns NR:ns ## COG: SPy0262 COG0030 # Protein_GI_number: 15674442 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 500 87.0 1e-141 MRIADYSVTKAVLERHGFTFKKSFGQNFLTDTNILQKIVDTAEIDKNVNVIEIGPGIGAL TEFLAENAAEVMAFEIDERLVPILEDTLRDHDNVKVINEDVLKADLQTRVKEFENPNLPI KVVANLPYYITTPILMHLIESKIPFEEFVVMMQKEVADRISAEPNTKAYGSLSIAVQYYM TAKVAFVVPRTVFVPAPNVDSAILKMTRRKQPLVEVKDEDFFFRVSKASFVHRRKTLWNN LTSHFGKSEEVKNKLEQALENATIKPSIRGEALSISDFARLSDALREAGL >gi|311100538|gb|AEKO01000007.1| GENE 11 10102 - 10974 551 290 aa, chain + ## HITS:1 COG:SPy0263 KEGG:ns NR:ns ## COG: SPy0263 COG1162 # Protein_GI_number: 15674443 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 483 80.0 1e-136 MQGRIIKALAGFYYVEHDGVVYQTRARGNFRKKRQTPYVGDFVEFSAEENSEGYILKIGQ RINSLVRPPIVNIDQAVVIMSAKEPDFNSNLLDRFLVLLEHKNIKPVIYISKMDLVEDDS EMKAIQKQYQKIGFDFVFSLEELLSLLTDKITVFMGQTGVGKSTLLNRIAPELKLETGEI SDSLGRGRHTTRAVSLYDVHGGKIADTPGFSSLDYEVDNAEDLSEAFPEIRQASHGCKFR SCTHTHEPSCAVKDEVEDGQIWQVRYDNYLQFLSEIENRRETYKKTVKRK >gi|311100538|gb|AEKO01000007.1| GENE 12 10982 - 11641 1059 219 aa, chain + ## HITS:1 COG:SPy0264 KEGG:ns NR:ns ## COG: SPy0264 COG0036 # Protein_GI_number: 15674444 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Streptococcus pyogenes M1 GAS # 2 218 3 219 220 351 82.0 5e-97 MSYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSK LVFDCHLMVVDPERYVDAYAQAGADIMTIHVEATKHIHGALQKIKAAGMKAGVVINPGTP VEALIPVLDLVDQVLIMTVNPGFGGQAFIPEMMSKVERVVELREKGGYSFDIEVDGGVDN NTIAACAKAGANVFVAGSYLFKNPDLTAQVQTLRDAIDA >gi|311100538|gb|AEKO01000007.1| GENE 13 11634 - 12266 339 210 aa, chain + ## HITS:1 COG:SPy0265 KEGG:ns NR:ns ## COG: SPy0265 COG1564 # Protein_GI_number: 15674445 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Streptococcus pyogenes M1 GAS # 1 210 1 210 210 257 60.0 1e-68 MPKIALFVGGELEWFTTDFDYFVGVDRACLRLLELGLPIDLAVGDFDSVSRSELEMIQSA AKDCMIAPAEKDDTDTELALKIIFQLYPEAEVTIFGAFGGRIDHMLSNIFLVSDLELAPF MRCICLRDKQNKITYYPEGSHKVLPEPGMTYVSFLHEGDGKLMILGAKYELTNMNYFQKK IYSSNEFVDGPIQVIVPNGYVIVIQTKDRS >gi|311100538|gb|AEKO01000007.1| GENE 14 12268 - 13542 1034 424 aa, chain + ## HITS:1 COG:SPy0266 KEGG:ns NR:ns ## COG: SPy0266 COG1322 # Protein_GI_number: 15674446 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 19 420 19 420 423 523 72.0 1e-148 MIYLLTLLTLLSLGILISLFLKNMELKEQINKSLEENADNLSDQVSFQLESFAKTNQLET TKQLNQLQMELYQQLTDIREVLHQNLSDNRDRSDQRLEQINQSLTKAVKDMQDSNEKRLE QIRQTVEEKLEQTLQTRLQASFETVSRQLESVNQGLGEMKNVAKDVGSLNKVLSNTKTRG ILGELQLGQIIEDILTVNQYEREFPTVSGSSERVEYAIKMPGNHKDEYIYLPIDSKFPLE DYYRLEDAYESGNKEEIENHRKSLLTSIKRFAKDINKKYLNPPETTNFGILFLPTEGLYA EVVRQPAFFDALRREENIVIAGPSTLSALLNSLSVGFRTLNIQKNADDISKILGNVKLEF GRFGDMLAKAQKQLNTASKTVDSLLNTRSRAIVRALDTIETYQDSATQSLLDLPRLENED KHED >gi|311100538|gb|AEKO01000007.1| GENE 15 13532 - 14473 965 313 aa, chain + ## HITS:1 COG:SPy0267 KEGG:ns NR:ns ## COG: SPy0267 COG3481 # Protein_GI_number: 15674447 # Func_class: R General function prediction only # Function: Predicted HD-superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 312 1 312 312 548 85.0 1e-156 MKINQMKKDEYFEGFYLIKCAEVRKTRAGKDYIAFTFQDDSGEISGNLWDAQPYNVEEFT AGKVVHMEGRREVYNNTPQVNQITLRLPSFGEPNDPADFKEKPPVNPSEVREYLEQMIFK IEEATWQRVVRALYRKYNKEFFTFPAAKTNHHAFESGLAYHTATMVRLADSIGDIYPELN KSLLFAGIMLHDLAKVIELTGPEHTEYTVRGNLIGHIALIDEEITKVLVELNIDDTREDV VVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNLDASMMMMTTALNLVGPGEMTNRLF AMDNRSFYKPKFD >gi|311100538|gb|AEKO01000007.1| GENE 16 14567 - 15391 830 274 aa, chain + ## HITS:1 COG:SPy0268 KEGG:ns NR:ns ## COG: SPy0268 COG0503 # Protein_GI_number: 15674448 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 1 273 1 273 279 407 82.0 1e-114 MKLKRSERMVVISNYLINNPYQLTSLNTFAERYEAAKSSISEDVAIIKKAFEESQIGEIE TVTGASGGVMFTPTISDEDARSLVEDLCKRLSESDRILPGGYLYLSDLLSTPSILKNVGR IIASAFKGQKIDAVMTVATKGVPLANAVADVLNIPFVIVRRDLKITEGSTVSVNYVSGSS DRIEKMFLSKRSLKPNSRVLIVDDFLKGGGTITGMISLLSEFDSELVGVAVFAENAKGDR DIHEYKSLLTVSDIDVKAQKVEVEVGNIFDKSKA >gi|311100538|gb|AEKO01000007.1| GENE 17 15610 - 16023 695 137 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821763|ref|YP_140205.1| 30S ribosomal protein S12 [Streptococcus thermophilus LMG 18311] # 1 137 1 137 137 272 100 3e-71 MPTINQLVRKPRQSKVVKSKSPALNVGYNSHKKVQTNVSSPQKRGVATRVGTMTPKKPNS ALRKFARVRLSNLIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGV ADRKQSRSKYGAKRPKG >gi|311100538|gb|AEKO01000007.1| GENE 18 16042 - 16512 794 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228477302|ref|ZP_04061940.1| ribosomal protein S7 [Streptococcus salivarius SK126] # 1 156 1 156 156 310 100 9e-83 MSRKNRAPKREVLADPLYNSKIVTRLINRVMLDGKRGTAATIVYDAFEQIKEATGNDALE VFETAMDNIMPVLEVRARRVGGSNYQVPVEVRPERRTTLGLRWLVNASRARGEHTMKDRL AKEIMDAANNTGASVKKREDTHKMAEANRAFAHFRW >gi|311100538|gb|AEKO01000007.1| GENE 19 16725 - 18806 2434 693 aa, chain + ## HITS:1 COG:SP0273 KEGG:ns NR:ns ## COG: SP0273 COG0480 # Protein_GI_number: 15900207 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Streptococcus pneumoniae TIGR4 # 1 692 1 692 693 1291 94.0 0 MAREFSLAKTRNIGIMAHVDAGKTTTTERILYYTGKIHKIGETHEGASQMDWMEQEQERG ITITSAATTAQWNGHRVNIIDTPGHVDFTIEVQRSLRVLDGAVTVLDSQSGVEPQTETVW RQATEYGVPRIVFANKMDKIGADFLYSVSTLHDRLQANAHPIQLPIGAEDDFRGIIDLIK MKAEIYTNDLGTDILEEDIPADYVDQANEYREKLIEAVAETDEDLMMKYLEGEEITNEEL KAAIRRATINVEFFPVLCGSAFKNKGVQLMLDAVIDYLPSPLDIPAIKGINPDTDEEETR PASDDEPFAALAFKIMTDPFVGRLTFIRVYSGILQSGSYVMNTSKGKRERIGRILQMHAN SRQEIEQVYAGDIAAAIGLKDTTTGDSLTDEKAKVILESIEVPEPVIQLMVEPKTKADQD KMGIGLQKLAEEDPTFRVETNPETGETVISGMGELHLDVLVDRLKREHKVEANVGAPQVS YRETFRAATQARGFFKRQSGGKGQFGDVWIEFTPNEEGKGFEFENAIVGGVVPREFIPAV EKGLEESMANGVLAGYPMVDIKAKLYDGSYHDVDSSETAFKIAASLALKEAAKTAQPTIL EPMMLVTITVPEENLGDVMGHVTARRGRVDGMEAHGNSQIVRAYVPLAEMFGYATTLRSA TQGRGTFMMVFDHYEDVPKSVQEEIIKKNSGEA >gi|311100538|gb|AEKO01000007.1| GENE 20 18994 - 20007 1267 337 aa, chain + ## HITS:1 COG:SP2012 KEGG:ns NR:ns ## COG: SP2012 COG0057 # Protein_GI_number: 15901835 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 337 1 335 335 596 91.0 1e-170 MVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPTMLAHLLKYDTTQGRFNGTVEV KEGGFEVNGKFVKVSAERDPEQIDWANDGVEIVLEATGFFATKAAAEKHLHANGGAKKVV ITAPGGNDVKTIVFNTNHDILDGTETVISGASCTTNCLAPMAKALQDNFGVKQGLMTTIH AYTGDQMILDGPHRKGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPIP TGSVTELVSVLNKEVTVDEVNAAMKAAANESYGYTEDPIVSSDVVGMSFGSLFDATQTKV QTVDGHQLVKTVAWYDNEMSYTSQLVRTLEYFAKIAK >gi|311100538|gb|AEKO01000007.1| GENE 21 20246 - 20614 65 122 aa, chain - ## HITS:1 COG:no KEGG:Pmob_0418 NR:ns ## KEGG: Pmob_0418 # Name: not_defined # Def: hypothetical protein # Organism: P.mobilis # Pathway: not_defined # 2 120 73 191 235 93 46.0 2e-18 MLYCKESFRHFGLITKNLVIILFQSLLVALPLIIFKGITHQIHSYLPLQSIQLTKEVMSQ SFPSNILAYIFICLIWGFWGGFNYAVIAEKIGIHFPSPYSWLDSGAITCAIFCLLSHGNI VF >gi|311100538|gb|AEKO01000007.1| GENE 22 20965 - 22164 1692 399 aa, chain + ## HITS:1 COG:SP0499 KEGG:ns NR:ns ## COG: SP0499 COG0126 # Protein_GI_number: 15900413 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 399 1 398 398 683 95.0 0 MAKLTVKDVDLKGKKVLVRVDFNVPVKDGVITNDNRITAALPTIKYILEQGGRAILFSHL GRVKEEADKEGKSLAPVAADLAAKLGQDVKFIPGVTRGAELEAAVNALEDGQVLLVENTR FEDVDGKKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVDKAVAGFLLE NEIAYIKEAVETPERPFVAILGGSKVSDKIGVIENLLAKADKVLIGGGMTYTFYKAQGIE IGNSLVEEDKLDVAKALLEKSNGKLILPVDSKEANAFADYTEVKDTEGEAVDPGFLGLDI GPKSIAEFDKALTGAKTVVWNGPMGVFENPDFQAGTIGVMDAIVKQPGVKSIIGGGDSAA AAINLGRADKFSWISTGGGASMELLEGKELPGLAALTEK >gi|311100538|gb|AEKO01000007.1| GENE 23 22317 - 22820 377 167 aa, chain + ## HITS:1 COG:SPy1879 KEGG:ns NR:ns ## COG: SPy1879 COG4129 # Protein_GI_number: 15675698 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 4 160 12 168 183 191 68.0 4e-49 MGLKFESKKFKFGMRTLKTGIAVFLVLGLFSALGWEGLQIGCLTAVFSLRENFDRSVQFG KSRIFANTVGGLLSLLFYFVNMWFDNSVWVTLLLVPILTMLTIVINVSFNNASGVIGGVA ALLIITLSIPPDNTFTYVIARVFETFCGVFIAILVNYDYDWLLKHLK >gi|311100538|gb|AEKO01000007.1| GENE 24 22994 - 23368 485 124 aa, chain + ## HITS:1 COG:SPy1878 KEGG:ns NR:ns ## COG: SPy1878 COG0789 # Protein_GI_number: 15675697 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 124 2 123 123 172 77.0 1e-43 MAREKELRRSLAVFPIGTVMKLTDLTARQIRYYEDQGLIQPERTAGNRRMYSLNDMDSLL EIKDFLNDGYNIAAIKHEYEERKVRAQQKQVALTDADVRRILHDELLQQGRFTTPSQRFG NLRI >gi|311100538|gb|AEKO01000007.1| GENE 25 23416 - 24759 1624 447 aa, chain + ## HITS:1 COG:SP0502 KEGG:ns NR:ns ## COG: SP0502 COG0174 # Protein_GI_number: 15900416 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 447 1 448 448 830 88.0 0 MAITAADIRREVKEKNVTFLRLMFSDILGVMKNVEIPATDEQLDKVLSNKAMFDGSSIEG FVRINESDMYLYPDLDTWTVFPWGDENGAVAGLICDIYTSAGEPFAGDPRGNLKKALRHM EEVGYKSFNLGPEPEFFLFKLDEQGNPTLEVNDKGGYFDLAPTDLADNTRREIVNVLTEM GFEVEASHHEVAVGQHEIDFKYADVLKACDNIQMFKLVVKTIARKHGLYATFMAKPKYGI AGSGMHCNMSLFTDEGNAFFDPEDPRGMQLSQDAYYFLGGLMKHAYNYTAIINPTVNSYK RLVPGYEAPVYIAWAGSNRSPLIRVPASRGMGTRLELRSVDPMANPYLALAVLLEAGLDG ILNKIEAPDPVETNIYSMSPEERKEAGIIDLPSTLRNALKALETDEVVRQALGNHIYTNF LDAKRMEWASYATFVSQWEIDNYLDLY >gi|311100538|gb|AEKO01000007.1| GENE 26 25087 - 25353 64 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLVRLYVGLMVDMDTLVMLNKLVRFKSWSRTITISNTLITIMLGLIYKIQQHQGRYLTF IQVHKRRSSVYGTLLLTEDLYRTKNGSC >gi|311100538|gb|AEKO01000007.1| GENE 27 25365 - 27047 2177 560 aa, chain - ## HITS:1 COG:SPy1876 KEGG:ns NR:ns ## COG: SPy1876 COG0595 # Protein_GI_number: 15675695 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Streptococcus pyogenes M1 GAS # 3 559 2 558 560 1038 91.0 0 MASKINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDY SYIVENVDRVKALVITHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDA QLYEINANTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPAD LHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFR LQQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHSSEILIMC TGSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIH GKINNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHAGLAVDCGVPKDNIFIME NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSEDGVVLAVATVDFKS KMILAGPDILSRGFIYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRPF LYEKTEREPIIIPMILTPDN >gi|311100538|gb|AEKO01000007.1| GENE 28 27052 - 27282 361 76 aa, chain - ## HITS:1 COG:SPy1875 KEGG:ns NR:ns ## COG: SPy1875 COG5503 # Protein_GI_number: 15675694 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Streptococcus pyogenes M1 GAS # 1 76 1 76 76 93 72.0 9e-20 MIYKVFYQETKERNPRREQTKSLYLDIDAETELEGRIQARQIIEKSTAYNIEFIELLSEK ALEYEKETGVFEVTEF >gi|311100538|gb|AEKO01000007.1| GENE 29 27543 - 28229 277 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 43 221 2 189 380 111 34 5e-37 MKILAFDTSSTALSVALLEDENLVAEATVTVKKNHSISLMPTIDFLVAQASWQPADLDRI VVAQGPGSYTGLRVAVATAKTLAYALDIDLVGVSSLQALTNLSVDGVVIPIMDARRNNVY VGFYENGQAIVPDCHAAFTDVLEQAKTFEKVTFVGEVVNFVDQIKESLPEATILSSLPSA LLIGRLGLSLPPVNVDAFVPHYLKRVEAEENWLKTHEETNRDNYIKRV >gi|311100538|gb|AEKO01000007.1| GENE 30 28189 - 28644 315 151 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15902174|ref|NP_357724.1| ribosomal protein alanine acetyltransferase [Streptococcus pneumoniae R6] # 21 149 14 141 145 125 53 3e-27 MRRLTVTTTSSASRLSCQEQAQLIYQILSDVYDKSPWTIEQVVADLALDTTEYFYVYDQE EVVGFLALQNLVGELEVTNIAVLKAYQGRGYASQLMKYLEERSEPIFLEVRDSNQVAQAL YRKFGFDSLGIRKNYYHEPQEDAVIMRREEV >gi|311100538|gb|AEKO01000007.1| GENE 31 28644 - 29657 729 337 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 6 326 519 850 860 285 48 4e-85 MADRYILAVESSCDETSVAVLKNEKELLSNIIASQVESHKRFGGVVPEVASRHHVEVVTL CIKDALSEAGIAAEQLDAVAVTYGPGLVGALLVGMAAAKAFAWAHGLPLIPVNHMAGHLM AAREVQELEYPLLALLVSGGHTELVYVSEPGNYKIVGETRDDAVGEAYDKVGRVMGLTYP AGREIDELAHKGKDVYDFPRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEVLVTEDLCA SFQAAVLDILLAKTKKALERYPVKTLVVAGGVAANQGLRERLAEEITDVDVIIPPLRLCG DNAGMIALAAAIEYDKKHFAELDLNAKPSLAFAGFEE >gi|311100538|gb|AEKO01000007.1| GENE 32 29709 - 30401 714 230 aa, chain + ## HITS:1 COG:SP0146 KEGG:ns NR:ns ## COG: SP0146 COG1296 # Protein_GI_number: 15900084 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Streptococcus pneumoniae TIGR4 # 12 229 1 218 218 193 49.0 3e-49 MSDFRLGVKAAVPTALGYVAIGLSFGVVASASGLSALEVALMCVLVYGGSAQFAMCALVV AGAGLGELTLTVFLVNLRNMLMSLHATMIFTKTSLWNQLGIGSLITDESYGVLLGEYVHH KDISADWMHGNNIFSYLVWIVSSVIGCLIGSMIPNPELFGLDFALIAMFLGLLSSQFDAL LGEGVRKLFMILLSIAVAYLSFSIILSESLAVLVSTLIGCSVGVMCDGRQ >gi|311100538|gb|AEKO01000007.1| GENE 33 30388 - 30714 395 108 aa, chain + ## HITS:1 COG:L54406 KEGG:ns NR:ns ## COG: L54406 COG4392 # Protein_GI_number: 15673594 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 108 1 108 108 70 44.0 7e-13 MAVNKFILTAILLGFIVSWVPRILPFVLVKYKGLPDIVVRFLHYLPVSILFALVLSSLTT EKIGHLPQFRWMEILAMVPTVIVAFKSKNLLYAVIVGIVSMALIRLVF >gi|311100538|gb|AEKO01000007.1| GENE 34 30754 - 33258 2463 834 aa, chain - ## HITS:1 COG:SPy1844 KEGG:ns NR:ns ## COG: SPy1844 COG0507 # Protein_GI_number: 15675669 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Streptococcus pyogenes M1 GAS # 3 831 2 813 817 991 62.0 0 MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWG QLTNHPKYGEQLQMTRYERSKPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKIL EDPSKLEQISNLSKVNREAFVAKLKINYGTEQILSKLSSYGLTPKAASQIFNQYKEESLN LIEEHPYLLVEEVQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA KALLERTIILLESARQIELDPSLVANQLTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHL TRIMKDQPDISAEDKIQSSLEEVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTT VINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRVNELTKLPSATIHRHLGLNSEDDF KTLDDYLDCDLIIIDEFSMVDTWLANQLFESISDTTQVIIVGDQDQLPSVGPGQVLADLL QIDDLPKVSLTKIFRQSEDSTIVTLASQMRKGQLPADFTEKKADRSYFEANASHILQMVP KIVSAAIKSGIAAQDVQILAPMYRGQAGINNLNTIMQDLLNPKEKANQFAFNDIFFRKND KILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMSFDGNEVIYPRNEWNKITLAY AMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVHNEG AKRNTYLIQRFEQTYSQAVDKSVEKIVKNEATDASNQTITENDIPSETLKNKDFLENIKP SQTLINTYSHPVDKSVNKAVQTEENSRLTEENWATIDPMIGLSEDDIAAFFNNN >gi|311100538|gb|AEKO01000007.1| GENE 35 33319 - 33960 758 213 aa, chain - ## HITS:1 COG:SPy1842 KEGG:ns NR:ns ## COG: SPy1842 COG0681 # Protein_GI_number: 15675668 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Streptococcus pyogenes M1 GAS # 12 207 4 193 197 232 58.0 3e-61 MKNKWTQYFLILLREWGLFILFITFFLLTRLFLWLPVQVDGHSMDPTLANNQRVIVLKHT SIERFDIVVAKEVEDGKTKQIVKRVIGMPGDTITYQNDKLTVNGKEVKEEYLKEFQAAFA KDKLQKEYAYNDDKSKSSYFQQLAKDAKAFTTNADGNTTFSVTVPEGKYFLLGDNRIVSK DSRAVGYFDKSALVGEVKFRFWPINKIGTVEDN >gi|311100538|gb|AEKO01000007.1| GENE 36 33979 - 34869 866 296 aa, chain - ## HITS:1 COG:SP0403 KEGG:ns NR:ns ## COG: SP0403 COG1039 # Protein_GI_number: 15900322 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HIII # Organism: Streptococcus pneumoniae TIGR4 # 1 296 1 292 293 332 61.0 5e-91 MGTIVLKMTAEQISVLQKDLASYATATKNPYASFSAKVDGTSVIAYTSGKVTFQGAKPEI LASRFGYQATPKQSTDGQNLALIGSDEVGNGSYFGGLAVVASLVTPADHAFLKALGVDDS KNLNDTKIRQIAPLLEEKIPHKALLLSPRKYNEVVGDGKAHNAVSVKVALHNQAIFLLLQ SGAKPDKIVIDAFTSEKNYQKYLKNERNRFDFPITLEEKAEGKYLAVAVSSIIARNLFLE NLDKLSQEVGYTLPSGAGAKSDQVATKLLQAYGDQALQATAKYHFANTKKAYQRLQ >gi|311100538|gb|AEKO01000007.1| GENE 37 35259 - 35498 292 79 aa, chain + ## HITS:1 COG:no KEGG:str1764 NR:ns ## KEGG: str1764 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 79 27 105 105 92 98.0 3e-18 MEEVERVAYEKYKIIKKQMKNADNETIAILMAINSLSTQLEREIQVEDMEKELEILRAKQ LEQLKVKATAQSDDDEDDA >gi|311100538|gb|AEKO01000007.1| GENE 38 35495 - 36037 418 180 aa, chain + ## HITS:1 COG:SPy1839 KEGG:ns NR:ns ## COG: SPy1839 COG1286 # Protein_GI_number: 15675665 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Streptococcus pyogenes M1 GAS # 1 180 1 180 181 133 44.0 2e-31 MIGLLVLAIMAWNFYIGYRRGLFMQAYYVVSVIIAMCVAAYFYKSLGEAINLWVPYANPT KDASVAFFTDQNVFSLDRVYYAGVSYFAIYCVTYYGLRFLGIFFHFVKIERLDQTRFQVA SGVLASLVSLVPLTMLGNILATVPINNIQTVLSSSWFLRFLINWNFPVSQIIQHLWTSVI >gi|311100538|gb|AEKO01000007.1| GENE 39 36149 - 36364 168 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477986|ref|ZP_04062597.1| ## NR: gi|228477986|ref|ZP_04062597.1| putative transposase [Streptococcus salivarius SK126] # 1 47 184 230 241 82 87.0 6e-15 MEDMVGLTLAYLNIKKLVKMMVGKTYYLIQIPQYYWIVRELSVNIKKANIVFDVCLHSEG KLYRVLFQKLT >gi|311100538|gb|AEKO01000007.1| GENE 40 36410 - 37132 212 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 220 1 227 245 86 27 3e-15 MIQIEHLSVSYQRTLALEDLSITIQGPTILGILGPNGAGKSTLIKAMLGLLPHSGRVQLD QKDIGQVLQRVAYVEQKTAIDFHFPITVRECVSLGLYPHLSIFKKKSKENLQKVEDALEL VNLLDLADRQIGQLSGGQFQRVLIARCLVQEADVIFLDEPFAGIDSVSEDIIMQTLHTLK KEGKTILIVHHDLSKVPAYFDQVIFLHRKLIAFGKTEDTFTKENLHAAYGHELFIGGGVE >gi|311100538|gb|AEKO01000007.1| GENE 41 37129 - 37962 584 277 aa, chain + ## HITS:1 COG:SPy0456 KEGG:ns NR:ns ## COG: SPy0456 COG1108 # Protein_GI_number: 15674575 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 1 270 1 270 284 318 77.0 7e-87 MITEFINGLQQFHFLQNALITAIAIGIVAGVVGCFIILRGMSLMGDAISHAVLPGVAMSF ILGINFFIGAIAFGLLASILITYIKSNSIIKSDTAIGITFSSFLALGVILIGIAKSSTDL FHILFGNILAVQDQDMWMTIGVGVAVLLVICLLFRPLLLTSFDPVLAQSMGVRVKVYHYL LMVLLTLVSVTAMQSVGTILIVAMLITPAATAYLYTKSLWSMMLLSSGLGALASILGLFI GYSFNIAVGSCIVLTSAVFFLISFFIAPKQRKNKTAL >gi|311100538|gb|AEKO01000007.1| GENE 42 37983 - 38915 939 310 aa, chain + ## HITS:1 COG:SP1650 KEGG:ns NR:ns ## COG: SP1650 COG0803 # Protein_GI_number: 15901485 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pneumoniae TIGR4 # 1 308 1 307 309 473 80.0 1e-133 MKKIASVLTLFVVLLVGLMACNKSSFSKSSSDKLKVVTTNSILADITKNIAGDKIDLHSI VPVGQDPHEYEPLPEDVKKTSQADLIFYNGINLETGGNAWFTKLVKNANKVENKDYFAVS DGVDVIYLEGQNQAGKEDPHAWLNLENGIIYAKNIAKQLIAKDPKNKDFYEKNLAAYTEK LNKLDQEAKQAFKNIPEEKKMIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPEQIKTL VEKLRQTKVPALFVESSVDERPMKTVAKDTNIPIFAKIFTDSIAKEGEEGDSYYSMMKWN LEKIAEGLNQ >gi|311100538|gb|AEKO01000007.1| GENE 43 38970 - 39143 100 57 aa, chain + ## HITS:1 COG:SP1651 KEGG:ns NR:ns ## COG: SP1651 COG2077 # Protein_GI_number: 15901486 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Streptococcus pneumoniae TIGR4 # 4 57 2 57 172 61 60.0 3e-10 MYTEEEKGVFVMTTFLGNPVTFTGHQVRDTAYDSSLTTLNFEKKSLADFAGKKKYLS >gi|311100538|gb|AEKO01000007.1| GENE 44 39301 - 39492 135 63 aa, chain + ## HITS:1 COG:SP1651 KEGG:ns NR:ns ## COG: SP1651 COG2077 # Protein_GI_number: 15901486 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Streptococcus pneumoniae TIGR4 # 1 51 111 161 172 91 80.0 3e-19 MLSDYFDHSFGKAYGLLINEWHLLARTVLVLDADNKAAYVEYLDNINSEPNCDAAIEAIK ALR >gi|311100538|gb|AEKO01000007.1| GENE 45 40043 - 40693 411 216 aa, chain + ## HITS:1 COG:SP1638 KEGG:ns NR:ns ## COG: SP1638 COG1321 # Protein_GI_number: 15901474 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 214 1 214 216 259 60.0 3e-69 MTPNKEDYLKCIYEIGAQHEKISNKEIAARMQVSPPAVTEMVKRMISENLLIKDKLHGYL LTELGFQTVSDLFRKHRLIELFLLKNLDYTTEEVHEEAEVLEHTVSDRFIDKLDQMLDTP KICPHGGTIPPKGKLLIEAYQDRLSDVSEPGTYRLRRVQDTFELLNFLEQIQLKIGDDIL LKGYDDYTGLFQLKIKGQEVQINHLIAQQLYIEKHD >gi|311100538|gb|AEKO01000007.1| GENE 46 41285 - 41512 304 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEVVTKIITAMGALVSIGGLGWAFLGAIEFFQGKKNQNAQLTDNGMVGMIYVGGLASVSE SIAATIVVAINSIQF >gi|311100538|gb|AEKO01000007.1| GENE 47 41580 - 43928 2595 782 aa, chain - ## HITS:1 COG:SPy1837 KEGG:ns NR:ns ## COG: SPy1837 COG1193 # Protein_GI_number: 15675664 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Streptococcus pyogenes M1 GAS # 1 782 1 779 779 1125 76.0 0 MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFVEH HSFAIGSLRDISESLRRLELDADLNIQELISIKKVLQASADLGRFYADLENVELVALKRL FEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKSCDDAIRQTLQDILKKSGHML AESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER HEMTRILHELSNQLRPQAAAIANNAWILGHMDFIRGKYLYLQDKKAVIPKISDNQTLQLL NVRHPLLVNPVANDLHFDEDLTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGS RVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDAADSNSLVLVDELGAGTDPQEGA SLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENL KFNRAVKKLYNEFSHEYDKELEKAQKDIQDMVDTALAESDSILKTLHDKSQLKPHEVIDA KGKLKKLAPQVDLSKNKVLRKAKKEKTTRAPRVGDDIIVTAYGQRGTLTSQAKNGNWEAQ VGLIKMTLKADEFTLVRAQAEVKQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIAT LG >gi|311100538|gb|AEKO01000007.1| GENE 48 44103 - 46742 3118 879 aa, chain + ## HITS:1 COG:SPy0185_2 KEGG:ns NR:ns ## COG: SPy0185_2 COG0749 # Protein_GI_number: 15674390 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Streptococcus pyogenes M1 GAS # 323 879 1 557 557 878 80.0 0 MTNQKKLLLIDGSSVAFRAFFALYNQIDRFRNNNGLHTNAIYGFHLMLDNLLERIQPTHV LVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQFPYIREMLAARGIAYYDLAQYEADDII GTLAKMAENTSEDYQITVVSGDKDLIQLTDVNTVVEISKKGVAEFEAFTPDYLMEKMGIT PAQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLLEHGSLEGIYDHIDEMKKSKMKENLIN DKEQAFLSKTLATIDTHSPIEIGLDDTAFTGPDLEKLAAFYDEMGFVQFKNALGGEAIPQ DFDVTYAEPSQVTADHFSSDDFFYFEILGDNYHTEPIIGFAWGNEKQIYASTDTDLLKSE AFQAALSKAVNIYDFKRSKVLLSHLGIDLPTANFDARLAKYLLSTVEDNELSTIARLYTD LPLETDEVVYGKGAKRAVPEKEVLLSHLAKKVKVLQVAKPVMLEKLAEHGQSELLFDMEL PLANVLAKMEIAGIKVKGQTLNEMAVENQVVIDKLTQEIYEMAGEEFNINSPKQLGVILF EKMGLPLEYTKKTKTGYSTAVDVLERLAPIAPIVAKILEYRQITKLQSTYVLGLQDYILE DGKIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPSTEDAVLLSSDYSQIE LRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDVTPNDRRNAKAVNFGIVYGIS DFGLSNNLGISRKKAKEYIDTYFERYPGIKAYMDNVVREAKDKGYVETLFHRRRELPDIN SRNFNVRNFAERTAINSPIQGSAADILKIAMINLDKALVEGGYKTKMLLQVHDEIVLEVP NDELVAMEALVKETMEAAVELAVPLIADENDGCTWYEAK >gi|311100538|gb|AEKO01000007.1| GENE 49 47048 - 48199 546 383 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46129221|ref|ZP_00155777.2| COG1194: A/G-specific DNA glycosylase [Haemophilus influenzae R2846] # 20 355 11 324 378 214 35 5e-54 MLDLKEYGIVMWDAEKIVSFRRTLLDWYDREKRDLPWRRTKNPYYIWVSEIMLQQTQVQT VIPYYERFLDWFPTVKDLAEAPEEKLLKAWEGLGYYSRVRNMQKAAQQIMTDFAGQFPDT YDNIAKLKGIGPYTAGAISSIAFELPEPAVDGNVMRVMARLFEVNYDIGNPKNRKIFQAI MDILIDPDRPGDFNQALMDLGTDIESAKNPRPDESPIRFFCAAYLNGTYDKYPIKLPKKK PKPMQIQAFIIRNTKGEFLIEKNIEGRLLGGFWSFPIMETDFIGQQLSLFEKDDYILETV SQKAIFEENYSLKPEWTNNDFTPVKHTFSHQKWTIEMVEGIVNDNKLTTDKELCWVTAED FNQFPMATPQKKMIKTYEDSKKG >gi|311100538|gb|AEKO01000007.1| GENE 50 48710 - 49075 127 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIETYLPINHSMRFTCRRSYNDLHHINISVTSVLCYKISALNFCRQFTHLASVSLPKLFY ATAQVSPFLYLLTFLMSFTSLFLKLTDLSLGFDFWWYHSLVAILCNIFNRRSYNDLHQTS T >gi|311100538|gb|AEKO01000007.1| GENE 51 49395 - 50348 674 317 aa, chain - ## HITS:1 COG:no KEGG:STER_1729 NR:ns ## KEGG: STER_1729 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 317 1 317 317 503 80.0 1e-141 MLYHKKKLGEKLGLPTFNHYYNIPIISLEYNLKKLGSSDTYIITFKQDNNLFVVDIRHQL GHTSHFDTVSLFEQDKLLSGIAAVPLASVHSIQILSFPDKLHSLNPSQRLKNLVALYYKN EEIMRYLKTTKNIGDQVTRYQLEAGRLERQGKDYDFFKYTSRGKIREEDGISEVSSKDYN FIPDFHPFLTSSRSQQVLSVPVTYFDDKTKQTARIDIMGWYIKDQQLKIRWKPKYMRKRR WRSSRISIDIVTDKYFFQGQIYRDSSAPVFLNNLSFDSKIPKSFLPHLQKQYQIFMALVE EQKRLALLRKVQLNNKD >gi|311100538|gb|AEKO01000007.1| GENE 52 50504 - 50842 541 112 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55737711|gb|AAV61353.1| 30S ribosomal protein S6 [Streptococcus thermophilus LMG 18311] # 1 112 1 112 112 213 96 2e-53 MAKVHESLDQKRRKISMAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKDWE KRRLAYEIQDFREGLYHVVNVEANDDAALNEFDRLSKINGDILRHMIVKLDA >gi|311100538|gb|AEKO01000007.1| GENE 53 50854 - 51372 759 172 aa, chain + ## HITS:1 COG:SPy1830 KEGG:ns NR:ns ## COG: SPy1830 COG0629 # Protein_GI_number: 15675657 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 172 1 163 163 247 80.0 7e-66 MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAEN LANWAKKGALIGITGRIQTRNYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNAG GFDNSNSFGGGASTGGSFGGSQPAQSTPNFGRDESPFGNSNPMDISDDDLPF >gi|311100538|gb|AEKO01000007.1| GENE 54 51414 - 51653 395 79 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|22537851|ref|NP_688702.1| 30S ribosomal protein S18 [Streptococcus agalactiae 2603V/R] # 1 79 1 79 79 156 100 2e-36 MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKV TTAIKRARVMALMPYVNED >gi|311100538|gb|AEKO01000007.1| GENE 55 51768 - 52658 599 296 aa, chain - ## HITS:1 COG:no KEGG:STER_1725 NR:ns ## KEGG: STER_1725 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 293 1 293 293 476 89.0 1e-133 MRIKFSLLIIACCLLLMACGNKNTQKNYQAYYSFNNVTTSTQEKQLAKALKSKGIPTKDW NNLAPYISRYNQENTNLQPVVKKWTQSKIGKDQNQFVTFLNEKTFEDNKSHFTDDLNCRR TSFLLLHNLITSSEDLTKLDLPLQNEFRDLKSRHKELNAKDQALYSLLFGDNISYQSTDE LLKAWKEAGLKFPENVKLLSVFQNSPGDVSNFHTAIAYEKDGSIYIFEKQDPTLPYRWSC FNNWVDIKTHWLGNRFKVFKDNVDILVNDQKFDDFLKNTLYIPQNNQLAPQDKRED >gi|311100538|gb|AEKO01000007.1| GENE 56 52775 - 53446 603 223 aa, chain - ## HITS:1 COG:SPy1828 KEGG:ns NR:ns ## COG: SPy1828 COG4858 # Protein_GI_number: 15675655 # Func_class: S Function unknown # Function: Uncharacterized membrane-bound protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 223 1 217 218 217 49.0 1e-56 MDIQKLTKKNQEFIHIATNQLIKDGKSDQEIKDILGNVIPELLENQKKGITGRSLLGAPT VWAASFSPEKHPQPNSDKTSKEVPETDKTPWKMWLDTSLFLLAIVAIMNAVFGFSGTQTS YGLTTLLSVSFIGGLAMYTPYHYIYRHNNKPKEERPKWWFSMTVITLSFIAWFALFSLTA LLPSYLNPGLSPIVILTIGVIAGVAKYFFKRHYNVQSTYAPAS >gi|311100538|gb|AEKO01000007.1| GENE 57 53479 - 54357 616 292 aa, chain - ## HITS:1 COG:SPy1827 KEGG:ns NR:ns ## COG: SPy1827 COG0598 # Protein_GI_number: 15675654 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Streptococcus pyogenes M1 GAS # 1 277 35 311 314 400 81.0 1e-111 MKVAERFNIDIQDLRAPLDVEETSRIDVEDDYTLILVDVPTQEERNNKSYYVTIPLGIIV TDEVVVTTCLEDISLMDNFLNHRVRNFYTFMKTRFVFQILYRNAQLYLTALRSIDRQSDK LEAQLENATKNEHLIDMMELEKSIVYLKASLKMNERIVKKLTGNASSLKKYIEDEDLLED TLVETQQAIEMAGIYENVLNAMAETSASIIGNNQNTIMKTLALMTMALDIPTVIFSAYGM NFKNNSMPLNDLDNAFWVIFFIAAFGSSCVVIYFIRKNGSNIEPLLFPKLLN >gi|311100538|gb|AEKO01000007.1| GENE 58 54754 - 57579 3164 941 aa, chain + ## HITS:1 COG:SPy1825 KEGG:ns NR:ns ## COG: SPy1825 COG0178 # Protein_GI_number: 15675653 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Streptococcus pyogenes M1 GAS # 1 940 1 940 942 1677 88.0 0 MQDKLVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTATEINDYLRLLYARVGVPY CPNGHGAIQSSSVEQIVDEVLALPERTRMQILAPIVRRRKGQHKAVFERVQKDGYVRVRV DGEIYDVTEVPELSKSKMHNIEVVVDRLVNKDGIRSRLFDSVEAALRLADGYLIVDTMDD NELLYSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDMDLVIPDASKTL REGALAPWNPISSNYYPAMLEQAMDQFGVDMDTPFEKLKKEEQDLVLYGSGDREFHFHYV NDFGGVRDIDIPFEGVVTNINRRYHETNSDFTRNVMRGYMNELSCPTCHGYRLNEAALSV RVGGENGLNIGQISDLSISDHLQEIDRLELGENERVIARPIVKEIKDRLTFLNNVGLNYL TLSRMAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKKMRDLG NTLIVVEHDEDTMREADWLIDVGPGAGAFGGQIMASGTPEEVAKNKKSITGQYLSGAKSI PVPTERRVGNGRFIEVIGASENNLKNVSVKFPLGKLIAVTGVSGSGKSTLVNGILKKKIA QELNRNSEKPGKHKSVTGIEHIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVRY KGKNIAEILDMTVDDAVDFFAAIPKIARKVQTIKDVGLGYVTLGQPATTLSGGEAQRMKL ASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLQRFADDGNTVLVIEHNLDVIKTADH IIDLGPEGGVGGGTIVATGTPEEVAAVPESYTGRYLKEKLT >gi|311100538|gb|AEKO01000007.1| GENE 59 57674 - 57916 189 80 aa, chain + ## HITS:1 COG:no KEGG:str1747 NR:ns ## KEGG: str1747 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 78 1 78 90 102 76.0 5e-21 MVKKRFFIGFNGILLALFLDICLLISIRTVDHHGRFQSTTDKSQTLLYVSGVYVSFLLFE VIFYLILKHRRNKQVLEQVL >gi|311100538|gb|AEKO01000007.1| GENE 60 58090 - 58239 93 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477314|ref|ZP_04061952.1| ## NR: gi|228477314|ref|ZP_04061952.1| hypothetical protein STRSA0001_0339 [Streptococcus salivarius SK126] # 1 49 1 49 49 79 85.0 5e-14 MRTKAYGEELNAETLENVTGGGFVARPQTLPERLGWNKWWLKRSPPYGD >gi|311100538|gb|AEKO01000007.1| GENE 61 58276 - 58476 128 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477019|ref|ZP_04061657.1| ## NR: gi|228477019|ref|ZP_04061657.1| hypothetical protein STRSA0001_0338 [Streptococcus salivarius SK126] # 1 66 6 71 71 105 93.0 9e-22 MDKQKNNLIRSLSIVIVIVWLFIVMINATLSFNEGVAFIDHCFVWSTLSLAFSLFALRVA SKDKEK >gi|311100538|gb|AEKO01000007.1| GENE 62 58679 - 58813 93 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLEEKQLFTVLSNDDLEQISGGFNPVKYGKYVINEFVKGFHHAW >gi|311100538|gb|AEKO01000007.1| GENE 63 58851 - 59000 188 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNAFQKIDIKDLVIVVGGSIDSSVGYGVGVVTHTVYDFGRGFVDGFRG >gi|311100538|gb|AEKO01000007.1| GENE 64 59007 - 59165 84 52 aa, chain + ## HITS:1 COG:no KEGG:str1746 NR:ns ## KEGG: str1746 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 3 52 14 63 63 78 84.0 9e-14 MYMDTMMMDKFDSLTFDKLSEIVGGNVAYDIGYGVGQVSYIAVEILKLRKIR >gi|311100538|gb|AEKO01000007.1| GENE 65 59303 - 60124 761 273 aa, chain + ## HITS:1 COG:CAC2734 KEGG:ns NR:ns ## COG: CAC2734 COG1131 # Protein_GI_number: 15895991 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 3 199 4 209 301 138 40.0 1e-32 MTVLAVKGLTYSFGKQTVLDNISFTLEKGDIAGLIGNNGAGKTTLMKLVSGILAGPKDII DLKTRTVGALIEAPALYPNMTVEANLKFYCKLYSKDYALIDRYKDELEVAAYLKRKASKL SLGMKQRVGLFIALIASDELILLDEPTNGLDPNGINSLLTLIKKLAKNHGLTFIISSHIL SNLEQVCTKNYLLRNHKLIYLDDSDNVKYKIYTEDLSLKSLMSLLKLNGLPFERQKHDIL VKGLAAVKQVMDREGIPFTYEKEGLSEVLFNEK >gi|311100538|gb|AEKO01000007.1| GENE 66 60114 - 60836 555 240 aa, chain + ## HITS:1 COG:no KEGG:str1743 NR:ns ## KEGG: str1743 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 80 221 1 142 142 171 82.0 2e-41 MKSKLRTVFLQQECVTRSVFICLGLVALIGAIVILCDGYRGDYLGPSAIVASYSFIVDIV FVYLAVSSLGREFQNRTINMIRVSSLSGCEVILRKLLSFLVLSIVAATILVLELAFYKYS VQHVDFPLWDYIRGIYIDFLLYGAFIYMVSSLLVLFVKSTLTAFVMTYFGVTGMTFFTLY LASLGDTITKLMTYVPFSFMRAVFTSGQQFFSLREAFVLFAWTLVLLLFAPTIYEKRAYV >gi|311100538|gb|AEKO01000007.1| GENE 67 60968 - 62029 1455 353 aa, chain + ## HITS:1 COG:SPy1824 KEGG:ns NR:ns ## COG: SPy1824 COG0006 # Protein_GI_number: 15675652 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Streptococcus pyogenes M1 GAS # 1 353 5 357 357 479 66.0 1e-135 MQRRLERFDAKLAQSGLDALLVTGQNNIYYLTDFWGTNATVFITKNRRLFLTDSRYTLIA KQSVHGFDIIESKDPLKDIVKIIGADKLETIGFDNQVSFAYYQGLQAIFEGYTLSPQSNF MEELRMIKDEKELATIRKACSISDRAFTDVLDFIKPGQTTELQVANFLDFRMREYGASGI SFESIIASGYRSAMPHGVASDKVIQSGETLTMDFGCYYNHYVSDMTRTIHIGDTTDEERE IYDIVLRSNQALIDAAKAGMTRRDYDKVARDVIVEAGYGDYFTHGIGHGIGLDIHEIPYF GNSDETIEAGMVLTDEPGIYLADKYGVRIEDDIIITKNGCELITLAPKELIVL >gi|311100538|gb|AEKO01000007.1| GENE 68 62048 - 62503 569 151 aa, chain + ## HITS:1 COG:SPy1823 KEGG:ns NR:ns ## COG: SPy1823 COG2131 # Protein_GI_number: 15675651 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Streptococcus pyogenes M1 GAS # 1 150 1 150 153 284 90.0 3e-77 MPNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSETDNCNEVGHY MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITYKANY RPHAFAIELMEQKGVSYVQHDVPEVHLGMDD >gi|311100538|gb|AEKO01000007.1| GENE 69 62616 - 63176 781 186 aa, chain + ## HITS:1 COG:SP0435 KEGG:ns NR:ns ## COG: SP0435 COG0231 # Protein_GI_number: 15900353 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 186 186 316 92.0 1e-86 MIEASKLRAGMTFVTNDGKLIKVLEASHHKPGKGNTIMRMKLRDVRSGSTFDTSYRPEEK FEQAIIETVPAQYLYQMDDTAYFMNTETYDQYEIPVANVQEELKFILENSDVKIQFYGTE VIGVQVPTTVELTVTETQPSIKGATVTGSGKPATLETGLVVNVPDFIEAGQKLVINTAEG TYVSRA >gi|311100538|gb|AEKO01000007.1| GENE 70 63247 - 63636 567 129 aa, chain + ## HITS:1 COG:SPy1820 KEGG:ns NR:ns ## COG: SPy1820 COG1302 # Protein_GI_number: 15675649 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 129 1 129 129 170 72.0 7e-43 MTTENIGEIVIAPRVLEVITGIAATKVDGVYALQNKNVTDSLSKTSLGRGVYLQTEEDGT VNADIYVSLQYGVNVPAVSIEIQKAVKAAVYDMAEVAISEVNVHVESIVTEKSQKPDLAE LFNEDFLND >gi|311100538|gb|AEKO01000007.1| GENE 71 63629 - 64063 610 144 aa, chain + ## HITS:1 COG:SPy1818 KEGG:ns NR:ns ## COG: SPy1818 COG0781 # Protein_GI_number: 15675648 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Streptococcus pyogenes M1 GAS # 1 141 1 142 150 171 63.0 5e-43 MTNIFKDSRRDLRERAFQTLFALEFGGEALEQAHFAYTYDKPIDEETEVDVPAFLLSLVT GVREELAQLDSQIEEKLKEGWSLSRLIVTDRTLLRLGLYEITSFEETPGRVAINEIIEIA KKYSDETSAKFINGVLSQFVTDEA >gi|311100538|gb|AEKO01000007.1| GENE 72 64153 - 65118 704 321 aa, chain - ## HITS:1 COG:SPy1817 KEGG:ns NR:ns ## COG: SPy1817 COG1609 # Protein_GI_number: 15675647 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 321 1 321 321 485 76.0 1e-137 MVAKLTDVAELAGVSPTTVSRVINKKGYLSQKTIDKVHAAMQELNYKPNNLARGLQGKSA KLVGLIFPNISNVFYAELIERLEDELFKQGYKTIICNSEHDPNKERDYLEMLAANQCDGI ISSSHNLGIEDYEKVEAPIIAFDRNLAPKIPIISSDNFEGGKLAAKALVKAGCQRIVMIT GNDNSDSPTGLRQLGFNYELNKHGIVCPVPNDLSLMRRELEIKSIISREKPDGIFVSDDL TAILVMKVARQLELSIPNDLKIIGYDGTAFIRHFYPELATIQQPLDEIAKLCVEILLKKI KGEIVSRDYVLPVNLISGGSI >gi|311100538|gb|AEKO01000007.1| GENE 73 65127 - 66569 1535 480 aa, chain - ## HITS:1 COG:SPy1816 KEGG:ns NR:ns ## COG: SPy1816 COG1621 # Protein_GI_number: 15675646 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Streptococcus pyogenes M1 GAS # 1 480 1 479 479 665 64.0 0 MNLPTEVRYRPYADWTNEEKTKIKENVAKSPWRASYHIEPETGLLNDPNGFSYFNGKFQL FYQSWPFGAAHGLKQWVHTETEDLVHFTETGVKLLPDHENDSHGAYSGSAYQIGDKLFIF YTGNVRDENWVRDPRQIGAWMDKDGKIEKFDKVLIKQPADATEHFRDPQIFDYKGQFYAI VGAQNHDKHGFIKLYKAVDNDVENWVEVGDLDFDGTGSEYMIECPNLVFVDGKPVLLYSP QGLDKAELDYNNIYPNTYKIFQDFDTEKPALVDGTPIINLDYGFEAYATQGFNTPDGRAL IVSWIGLPDVDYPTDKYDYQGAMSLVKELSIKDGKLYQYPVEAITSLRASQEDFSEKTAT TNTYELELNFEANSQTELVLFANQEGNGLSLTVDTENGKVILDRSKAGEQYATDFGTSRE CTLDAGQAATANIFVDNSIVEIFFNKGEKVFTSRVFPSAEQTGIKVTSGNVSGHYFDLKY >gi|311100538|gb|AEKO01000007.1| GENE 74 66757 - 68658 2297 633 aa, chain + ## HITS:1 COG:SPy1815_2 KEGG:ns NR:ns ## COG: SPy1815_2 COG1263 # Protein_GI_number: 15675645 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 90 461 1 370 385 451 63.0 1e-126 MDNKQIAKEVIDALGGRENVNSVAHCATRLRVMVKDENKINKEKAENIEKVQGAFFNSGQ YQMIFGTGTVNKIYDEVVAQGLPTASKDEQKAEAAKQGNWFQRAIRSFGDVFVPLLPAIV ATGLFMGIRGAINNDTVLGLFGTTSKAFAATDFYTYTVVLTDTAFAFFPALICWSAFNVF GGSPLLGLVLGLMMVNNALPNAWDVASGAAKPIYFFDFIPVVGYQNSVLPAFFVGLLGAK FEQWVRKWVPDVLDLLLRPLIVFAVMSALALFIIGPVFHTVESYVLAATEWILNLPFGLA GLVLGGVHQVIVVTGVHHVFNLLEANLIANTGKDPLNAIITAAMTAQAGATLAVGVKTKD SKLKALAFPATLSAVLGITEPAIFGVNLRFGKPFIMGLIAGAAGGWLASILNLAGTGFGV TIVPGTLLYLNGQVLKYVIMVLVTLALGFVLTWLFGYKEEEVEAQKEVVAEDIASAESAP VALQAETIAAPLKGEVVALENVNDPVFSSGAMGKGAAIKPSGNQVVAPFDGEVQIAFPTG HAYGLKSDKGAEVLIHIGIDTVSLDGKGFDAKVQANQRVKKGDVLATFDSSVITEAGLDD TTMVIVTNTADFEDVSSVATGSVAEGADFIAVK >gi|311100538|gb|AEKO01000007.1| GENE 75 68842 - 69735 1186 297 aa, chain + ## HITS:1 COG:SP1721 KEGG:ns NR:ns ## COG: SP1721 COG1940 # Protein_GI_number: 15901554 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 291 1 294 295 456 74.0 1e-128 MAKLYGSLEAGGTKFVCAVGDEKFQVIEKTQFPTTTPYETIDRTIEFFKRYEDQLAGIAI GSFGPIDVDPNSETYGFVTSTPKPHWSNVDLLGLIAKEFNIPFYFTTDVNSSAYGETLVR KGVKSLVYYTIGTGIGAGAIQNGEFIGGMGHTEAGHVYVPLHPNDVSNEFNGTCPFHRGC LEGLAAGPSLEARTGIRGELIEQNSEVWDVQAYYIAQAAVQATVLYRPEVIVFGGGVMGQ EHMLRRVREKFTTLLNGYLPVPDVTEYIVTPAVSGNGSATLGNFALAKDVADKHSRK >gi|311100538|gb|AEKO01000007.1| GENE 76 69828 - 70748 917 306 aa, chain + ## HITS:1 COG:SPy1810 KEGG:ns NR:ns ## COG: SPy1810 COG1482 # Protein_GI_number: 15675642 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 305 11 315 317 452 69.0 1e-127 MHEKIWGGNRLKTEFGYDISSEHTGEYWAISAHPNGVSYVKNGKYAGFHLAELYKDKPEL FGHPKASVFPLLTKILDANDWLSVQVHPDDAYGMEHEGELGKTECWYIIDAEEGAEIIYG HKAQTKEELAALIEAGDWDGLLSKTPVKKGDFFFVPSGTMHAIGPGILILETQQSSDTTY RVYDFDRRDDQGNKRELHIQQSLDVLDLGDPENSVPATVKTLQLESTCLTSNSFFAVYKW KLNGLVDFKQSAPYLLCSVLSGNGTMTIDSRIYCLKKGDHFILPNDVTDWEIDGQLEMIV SHPNEA >gi|311100538|gb|AEKO01000007.1| GENE 77 70751 - 71095 295 114 aa, chain + ## HITS:1 COG:no KEGG:str1731 NR:ns ## KEGG: str1731 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 29 113 1 85 86 151 92.0 9e-36 MSNEKVLAALFERIEIGKSYYFEGAYYRLKDYGDHIYGLQRAIPGMCGEKTASPSIKFYW ENGVLEYEFYVDFEASPMIMKAYSSSDRAFFEQAFENLLHDFEDFLENQEITEK >gi|311100538|gb|AEKO01000007.1| GENE 78 71278 - 73827 2925 849 aa, chain + ## HITS:1 COG:SPy1805 KEGG:ns NR:ns ## COG: SPy1805 COG0653 # Protein_GI_number: 15675639 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Streptococcus pyogenes M1 GAS # 1 849 1 838 839 1328 81.0 0 MANILRKIIENDKGEIKKLEKTAKKVESYADAMAALSDEELQAKTEEFKQRYQNGESLDQ LLPEAFAVVREGAKRVLGLFPYRVQIMGGIVLHHGDVPEMRTGEGKTLTATMPVYLNAIS GEGVHVITVNEYLSERDATEMGELYSWLGLSVGINLSAKSPAEKREAYNCDITYSTNSEV GFDYLRDNMVVRKENMVQRPLNYALVDEVDSVLIDEARTPLIVSGPVSSETNQLYHRADA FVKTLTEDDYAIDIPTKTIGLNDSGIDKAEEFFNLDNLYDIDNVALTHYIDNALRANYIM LHDIDYVVSPEQEILIVDQFTGRTMEGRRFSDGLHQAIEAKEGVPVQEETKTSASITYQN MFRMYKKLSGMTGTGKTEEDEFREIYNMRIIPIPTNRPIQRIDHDDLLYSTLDAKFRAVV QDVKRRYEKGQPVLVGTVAVETSDLISKMLVDAGIPHEVLNAKNHEKEAHIIMNAGQRGA VTIATNMAGRGTDIKLGEGVLDLGGLCVIGTERHESRRIDNQLRGRAGRQGDPGESQFYL SLEDELMRRFGSDRIKHVLERLNADDEDIVIKSRMLTRQVESAQKRVEGNNYDTRKQVLQ YDDVMREQREIIYAERYDVITAERDLEPEIKAMIKRTINRTVDGHSRNDQEEALKGILNF ARQALVPENAISLEDLQEVGEVTKRSVNYDAIKVYLTELADDVYNRQIKKLRSEEAIREF QKVLILMVVDNKWTDHIDALDQLRNAVGLRGYAQNNPIVEYQSEGFKMFQDMIGAIEYDV TRTMMKAQIHEQSREHVNERVSTTATGNIQAHQADANGQEIDFSKVGRNDFCPCGSGKKF KNCHGRKQF >gi|311100538|gb|AEKO01000007.1| GENE 79 73851 - 74882 1289 343 aa, chain + ## HITS:1 COG:SP1701 KEGG:ns NR:ns ## COG: SP1701 COG0722 # Protein_GI_number: 15901535 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 343 1 343 343 554 76.0 1e-157 MVFKAVSEKIDFDAVKESTTLTGEALAKKQARDKELEAIIKGEDDRTLLVIGPCSSDNEE AVLDYAHRLAKLQEEVKDKVFMVMRVYTAKPRTNGDGYKGLVHQPDAEGKPNLINGIKAV RNLHYRVITETGITTADEMLYPENLPLVDDLVSYIAIGARSVEDQQHRFVASGIDVPTGM KNPTSGNLNVMFNGIYAAQNKQNFLFNGEEVETSGNPLAHVILRGSTNEYGKNVPNFYYD DVLETIEHYEQMGLENPFIVIDTNHDNSGKRYLEQIRIVRQTLINRDWNEKINKVARGFM IESYLEDGRQDAPDVYGKSITDPCLGWDKTEELIREIHDTLSK >gi|311100538|gb|AEKO01000007.1| GENE 80 74967 - 75998 1202 343 aa, chain + ## HITS:1 COG:SP1701 KEGG:ns NR:ns ## COG: SP1701 COG0722 # Protein_GI_number: 15901535 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Streptococcus pneumoniae TIGR4 # 7 341 7 341 343 476 68.0 1e-134 MGIHQNSPLIDVAEVRKLHALTGDALVTKQANDETLAKIIKGEDKRVLLVIGPCSSDNEE AVLDYAHRLAKLQEEVKDKIFIVMRVYTAKPRTNGDGYKGLIHQPDAEGDVDLLAGVKAV RHLQSRIITETGLPIADEMLYPSNLSFFDDLLSYHAVGARSVEDQEHRFVASGIDVPIGL KNPTSGNLNVMFNGIYAAQNQQHFLYNGAEVKTDGNSLAHAILRGANNENGQNIVNYHYE DLVKALDKYSAFNLENPFILVDTNHDNSGKNFMEQVRIVREVLLNREWDERIADTVRGFM IESYLEDGRQDTPEVYGKSITDPCLGWDKTDSLIREIHNRLSL >gi|311100538|gb|AEKO01000007.1| GENE 81 76001 - 76354 274 117 aa, chain + ## HITS:1 COG:SPy1804 KEGG:ns NR:ns ## COG: SPy1804 COG0736 # Protein_GI_number: 15675638 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Streptococcus pyogenes M1 GAS # 1 115 1 115 118 159 65.0 1e-39 MIFGHGIDLQEISAVKKAYDRNPHFAKKVLTPREWERFESLSGNRQMSFLAGRWAGKEAF SKAWGTGIGAVGFKDIEILNNDKGAPVVTQSPFEGKVFISISHSGDFVQASVILEKN >gi|311100538|gb|AEKO01000007.1| GENE 82 76382 - 77485 1126 367 aa, chain + ## HITS:1 COG:SPy1802 KEGG:ns NR:ns ## COG: SPy1802 COG0787 # Protein_GI_number: 15675637 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Streptococcus pyogenes M1 GAS # 1 366 1 366 366 503 64.0 1e-142 MISSLHRPTLAKVDLSAISENIEQVVSHIPKQVQTFAVVKANAYGHGAVEVAKHVSKQVE GFCVSNLDEALELRQAGLEQPILILGVVLPDEVPLAIQENITLTVASLEWLEMAKKQGLD LTGLTCHIKIDSGMGRIGVRNLEDADNLIAGLKDLGADVEGIFTHFATADEADDSKFKRQ LAFFTDLVNNLVDRPRLVHASNSATSIWHAETVFNAVRLGVVIYGLNPSGSVLDLPYNIR PALSLETALVHVKTLPAGKDVGYGATYTTTVDEVIGTIPIGYADGWTRDLQGFHVIVDGQ LCPIVGRVSMDQITVRLPKVYPLGTPVTLMGENGGASITATEVAEKRGTINYEVLCLLSD RVPRSYD >gi|311100538|gb|AEKO01000007.1| GENE 83 77616 - 79634 1665 672 aa, chain + ## HITS:1 COG:SPy1785 KEGG:ns NR:ns ## COG: SPy1785 COG1200 # Protein_GI_number: 15675625 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Streptococcus pyogenes M1 GAS # 4 672 3 671 671 1051 77.0 0 MIRLDSPIADLKGFGPKSAEKFTKLDLHTVGDLLLYFPFRYEDFKSKSIFELMDGEKAVI TGTVVTPANVQYYGFKRNRLSFKIKQGEAVIAISFFNQPYLVDKIEMGAEVAIFGKWDQK KSAVTGMKVLAQVEDDMQPVYHVTQGVSQAQLIKAIKAAFDSGALNLLEESLPQVLMDKY RLMGRQEAVHAMHFPKDLAEYKQALRRTKFEELFYFQMNLQVLKAENKSETNGLAIAYDE AKIKAKIAELPFPLTEAQQLSLSEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYGAYT AGLQSALMVPTEILAEQHYQSLQGFFPDLEVVLLTSGMKAADKKVALSKIESGEAQMIVG THSLIQDTVTYHRLGLVITDEQHRFGVNQRRIFREKGDNPDVLMMTATPIPRTLAITAFG EMDVSIIDQMPAGRKPIITRWVKHEQLDTVLAWIKGELEKDAQVYFISPLIEESEALDLK NAVALHQELTDFFGDSATVALMHGRMKNDEKDQIMQDFKDKKSQILVSTTVIEVGVNVPN ATVMVIMDADRFGLSQLHQLRGRVGRGDKQSYCVLVANPKNDTGKKRMQAMCETTDGFVL AEEDLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARRVASQIVSDPNWRENPGWQV IEVHLRSQSEFD >gi|311100538|gb|AEKO01000007.1| GENE 84 80402 - 81010 571 202 aa, chain + ## HITS:1 COG:no KEGG:STER_1696 NR:ns ## KEGG: STER_1696 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 202 1 202 202 313 94.0 2e-84 MKTILFYVLIVLALAGSSYYGWRSAKSAKSHQETQEQKRLRSVLLFVNVLLFAGFLSLVI TILNDAFILTGHEGLLQQGLRMLLGSGVTVKSSSTSLTLFAAIIDFLRMSVNLGFLLCLR AFLINLYRSDIFIAKNAKLVRWSAHLLVLGAFINNGIFTFGTGNQSYSFFNISYLLVSFV LYAVSMILTKANAIAEENEYTI >gi|311100538|gb|AEKO01000007.1| GENE 85 81016 - 81231 226 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 1 65 1 65 67 91 66 7e-17 LMIIVNLDVELAKKKMRSGELAERIGITPANLSVLKTGKAKAIRFTTLDAICKELDCQPG DILEYRPDEEN >gi|311100538|gb|AEKO01000007.1| GENE 86 81282 - 81425 114 47 aa, chain - ## HITS:1 COG:no KEGG:STER_1691 NR:ns ## KEGG: STER_1691 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 47 1 47 65 79 89.0 4e-14 MKLSIEATDKLENKDFHYELIVSQTHVAMVCGTVLASLALIAWLKKK >gi|311100538|gb|AEKO01000007.1| GENE 87 81429 - 82397 1103 322 aa, chain - ## HITS:1 COG:SPy1782 KEGG:ns NR:ns ## COG: SPy1782 COG0252 # Protein_GI_number: 15675622 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Streptococcus pyogenes M1 GAS # 3 322 2 321 321 473 74.0 1e-133 MTKKILVLHTGGTISMSADDDGKVSQNADNPMNHVGLDLDNLDLTVLDFLNIPSPHITPY HMLDIYKKIKETAGQYDGVVITHGTDTLEETAYFLDTMNIPEIPIVITGAMRSSNELGSD GVYNYLSALRVASNDKAADKGVLVVMNDEIHAAKYVTKTHTTNVATFHTPTHGPLGIIMK HDILWFKTAEPRVRFDLEQITGTVPIIKAYAGMGIGDGIISLLDPEKIDGVVIEALGAGN LPPLAAREIKSLMDKEVPVVLVSRCFNGIAEPVYAYEGGGVKLQEDGVMFVKELNAPKAR LKLLIALSAGLEDQELKDYIEG >gi|311100538|gb|AEKO01000007.1| GENE 88 82469 - 83854 1566 461 aa, chain + ## HITS:1 COG:SPy1781_1 KEGG:ns NR:ns ## COG: SPy1781_1 COG0561 # Protein_GI_number: 15675621 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 279 1 279 279 422 72.0 1e-118 MAIKAVFFDIDGTFLNDRKRVSSSTKKAITQMKEDGILVGLATGRGPGFVQPFMDNLGLD FAVTYNGQYILTHDKVLYQNQLPKSTVYNLIRYATKHRREISLGTSTGLVGSNIISMGTS KFGQIVSHIVPKSWAKMVERSFKSLIRRFKPQSIETLKTIMREPIYQVVMVATVGETQDI EEKFPHVKITRSSPYSADIISADQSKLKGIAHLGEVFGFELSEVMAFGDSENDLEMLSGV GVGVAMGNGEDELKDQATHVTDTNNQNGIAKALSHYGLIHFETENSFTSDDDNFNKVKDF HHLMDGSTTDMPRVYGIEEASHRSDFKLEEIVEFLYASSGGDKRVFGQAVLDLHAALDKA ALKVSSKEHSESTMVGQVDALTDLLYLTYGSFVLMGVDPKPFFDTVHEANMGKIFPDGKA HFDPVTHKILKPSDWEERFAPEPHIKRELDRQIQKSLQRSK >gi|311100538|gb|AEKO01000007.1| GENE 89 83972 - 85117 1456 381 aa, chain + ## HITS:1 COG:no KEGG:str1721 NR:ns ## KEGG: str1721 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 96 381 3 288 288 399 83.0 1e-110 MTKADWLDFFEAINGRSATEEEIAAALAAGEFQDDAPEVETAPVQEAPAQPVFASAQETP VQEAQQQPTFAGAQEAQPQAPFANAQAAQAQPSFAGAQTAPVQGVPNQAVQPQAGFATAQ VGQQAAFANGQPLQPGQNVQFINGQAVVVPAQPSAFATTFKNYWTWLLNAWRRPADMTDY GKHNGWLNYIFLSLFTGLAFFAILSAVARKFISPVVSTTNALSSMFGSYGTDSYSSSFSS HTSSIGFGAFFASILAAFLFIFAFILAGFVTRKGIFRDPETTFLNSFDRFGRLTSLALPV LLVTILFGAIGLVGFPLFLFYVVYFLFALANLFTIVPVTTAWKADKFYQMILAALLNGVI LSILFAIVFTIMSSFTIGLLF >gi|311100538|gb|AEKO01000007.1| GENE 90 85290 - 85664 236 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477297|ref|ZP_04061935.1| ## NR: gi|228477297|ref|ZP_04061935.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 95 43 137 575 155 91.0 1e-36 MGLDQEATPSEPTEEVDEYDVAEEVFEDVPLGDEEETTLLEIEELSPVSHADQGQTEENS EAASKEAQAIWMKAFKTYVGRQPLPEEFLLGKSSGMMCQPSISLSQMVRQRNQPSQPWLR ERKS >gi|311100538|gb|AEKO01000007.1| GENE 91 85640 - 85861 167 73 aa, chain + ## HITS:1 COG:no KEGG:STER_1685 NR:ns ## KEGG: STER_1685 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 47 21 67 206 65 72.0 4e-10 MAKGKKILIIAGVVVAVLALSGYCFAPYYYSRGQVAERYEAAAKKSFRDSLEYQVWSDTK KEIKTSEAKYTSL >gi|311100538|gb|AEKO01000007.1| GENE 92 85890 - 86876 968 328 aa, chain + ## HITS:1 COG:no KEGG:SMU.502 NR:ns ## KEGG: SMU.502 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 1 327 238 565 566 286 51.0 6e-76 MQKVGRQFLIFPKWRVVVDPGTVDLTVNTADLNVTINDIAYATTDSNNYTAKLNHLYPGT YNFVASGKVNDQEITVSSEENVTSKTEVNLSVEYLSFTVKSNLKDGDLYVGGTKVGTLNS GKLDVNKVAVAGSSAVYVKKNFEDGSSIKTETLSIKKISEGQTVTLDADGVLDRDTADRL LTAAYGKFGSSASNHNTTPDGVSDIFLNGTDDTMYKDVTADIDKNTTGAKNRAADSITFS GIDVTEVVQTGEKTFKVTFTAVYDFYYGYDSKFKSSGDIKDKISWSCNVEYVGDDDSDSS SSSSDYSNYRINGKAGESQHVSRENTVK >gi|311100538|gb|AEKO01000007.1| GENE 93 87089 - 87535 370 148 aa, chain + ## HITS:1 COG:SP1915 KEGG:ns NR:ns ## COG: SP1915 COG3279 # Protein_GI_number: 15901739 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 1 148 2 149 149 164 59.0 7e-41 MKVRIELDPSMDEPEILIRAPRLTQELAQLQESILKQKLVPLAFYKDRSEYFLDLANILF FETDGEKIYGHTKDEAYEVKQKLYELEDLLPIAFCRISKSTIVNVKQIYSLEKSFSGTST VNFYQTHKQVHVSRRYYQVLKERLNEMR >gi|311100538|gb|AEKO01000007.1| GENE 94 87540 - 88220 516 226 aa, chain + ## HITS:1 COG:no KEGG:STER_1683 NR:ns ## KEGG: STER_1683 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 226 1 226 231 347 91.0 2e-94 MRKKLVGILLILLAALVIVQDYFIQWEISFWMLAWVVLLAILSLSSFLKRHFALGFAYGI VALFSLNGQFQFLPVSNSVVILSSILAVIGLNILFNSSSKTKNRFGLGSTGSDANNGGND IDVSFSTVTKYLNDQHFTHGSADVSLGQASVYFDNCHIEGSSAQFDVDVSLGSLSLYVPS DWRVHINVDNSLSAIQHQENPSNLTSKDFYIKGEVSLGNLEIIYIG >gi|311100538|gb|AEKO01000007.1| GENE 95 88622 - 88939 235 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228476979|ref|ZP_04061617.1| ## NR: gi|228476979|ref|ZP_04061617.1| putative membrane protein [Streptococcus salivarius SK126] # 1 105 353 457 457 179 89.0 6e-44 MNVVDLTLRVSIFFSNAIDESKQVPVSQINFSFHSHNKDGSYHFVMENRMQEEKVDLDAI MQEENQKKTSDLNLHSAKNILRKYSDDKLITSSGDYLLKQELIFK >gi|311100538|gb|AEKO01000007.1| GENE 96 89189 - 92509 3037 1106 aa, chain + ## HITS:1 COG:SPy0776 KEGG:ns NR:ns ## COG: SPy0776 COG3857 # Protein_GI_number: 15674821 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Streptococcus pyogenes M1 GAS # 1 1071 1 1068 1071 1060 51.0 0 MKLLYTDMSQDLTEILTEQATSYAQKGKRVFYIAPNALSFEKERKVLEYLPKSVSFDITV TRFTQMPRYFILNTSNPKTQLDDTGLAMIFYKVLSHMDDDELKVYGRLRKDSNFINQLVD LYKELQQANMTVLDLQHLDQVEKQEDLVRIISAAQDLLLAGDFDNQSKLSAFFKEITSGH LDKALSNTVLVIDGFTRFSAEEEALVALLNDKCHQIVVGTYASQKAYRANFVYGNVYQAS VDFLRTLAQTYKVTPDYVTTDKEGNLSFARISRLLESRHDFSTVDEKVTEQDKHALQVWE VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLQVGQIFRKFDIPYYFGKEES MSSHPLVQFVDSLERIKRYNYRTEDLLNLVKSGLHGGFAQEELDLFEYYVNFADIKGRHK FLSDFTANSRDKYDLDKLNALRSQLLEPLDKLLNSRKQKGSSLLKKLVVFLEAVQVPSKM AALTAKASEAEKEQNEQVWKVFTQLLEQVETIFGKETLSVDDFLSILRSGMSACDYRTVP ATVDVVNVKKYDLIQPYSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRSL DIVTQSNSQRGHFVAMSLFNAASEQLVLSQPQILNETQDDMSVYLKELLDLGLPLVEKGR NRFEAKGDQIGNYRDLLSTVIALNSSHLDVDLDKDTQTFWSVAVRYLRKRLDKDQVLIPT VIDDVTTTKVDEQVMQLVFPGEEPLKLSASALTTFYNNQYLYFLRYVLGLEELESIHPDA RHHGTYLHRVFERVMGDSSSENFDDKLEKAIAQTNQEQPFEILYTEDQESRLSRQILEDI ARSTASVLRDNAAVKVEREEAKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKSGKNVF DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQDPQLNLAKFGLDKLAAQAHK ELTYKGLFVASETEHLAGGNYDLQKTVTYDKKDLETLLDYNIKLFTSAAEVIRSGNFAVN PYTEDGKSVQGDQIKAITHFEADRHMGQARKLLRLPSKGKKEAYLELMAKDEDDNEMQVA ENTITFPVIDQAVKADKKDQEDNHVD >gi|311100538|gb|AEKO01000007.1| GENE 97 92499 - 96152 4217 1217 aa, chain + ## HITS:1 COG:SPy0777 KEGG:ns NR:ns ## COG: SPy0777 COG1074 # Protein_GI_number: 15674822 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Streptococcus pyogenes M1 GAS # 6 1216 7 1209 1210 1102 50.0 0 MLTKTFLSPTEIEERIAQESASDKERKLTPEQIEAIYSNGSNILVSASAGSGKTFVMVER ILDMIGRGVGIDQLFISTFTVKAAGELKERLEKRLTEQLGQVETDEERAFLSDQIAKIGT ADIGTMDAFTQKLVNQYGYLLGVSPIFRIMTDPAEQTLMKNEVYADLFNDYMQGKDAQLF QKLVRNFTGHSKTSTAFRDLVYDIYNFSQATAGPEKWLRQNLLKGQAEANPEKAKAELLE GLKDGLLADFLAFLRDHLGLAQREFAKAKYLNNVSDAISLLEGALANDQTDMEDLLKQLL TLSGGTGLTNMTRPKDEELKAYKEAYNKTKNEFVAQLREVDTQLTVLEVLTKHNDDILPL LELLQAFVLDFSDQYLQAKIQENAFEFSDIAHFAIRILEENPEVAVRYRDRYHEVMVDEY QDNSHTQERMLELLSNGYNRFMVGDIKQSIYRFRQADPQIFNGKFQLFLENPDAGKLILL KENFRSQSEVLDATNGVFSHLMDQEIGDILYDKTHMLVAGSEKQKEPHPENETEVLIYNS DEASVTPDEEGADQPISSGEISLVIKEIIKLHEQGVRFEDITLLAPTRNTYLDLMASFEE HGIPLVPDEYKSSYLESLEVMIMLDTLRAINNPLNDYALVALLRSPMFNFNEDDLARIAV QDDKGQFYDKLLAAHTKSGLHPEVVTQGLDTKLTLFTETLVDWRDYSKWHSLYDLIWKIY DDRFYYDYVGSLPRAEQRQANLYALALRANAYEKTGFKGLSRFIGMIDKIISSGNDLEEV ADLVPKNAVSLMTIHKSKGLEFKYVFVLQMNRKFIGHSKDGLSGKYIINREKGLGIKYLA DLKDQVNTNLPKLNVVLETLTFQENRREERRASISEEMRLLYVAMTRAEKKLYLVGKGSK EKLTQQFGTDVENNRLPVALRDQIATYQDWVMALDTAFMRKDLKFTVRFVEAEELIPEAI GQVEVQAAVDADDLSNNRQTEEIKRALTVLESVEKLNQLYAPAIDLPSVRTPSQLKTFYE PVMDTEGVDIMYKKEEVQPLETTTSFELPDFGQKTKVTGAAVGSATHELMQRLILSDTVT LQDLTQALSRVSADDQVKARVQLEKLLGFFDTELGKLILVNRGKLRREAPFAMLAEDPAS KEDFVVRGIIDGYLLLEDRIVLFDYKTDHFTYPSEIKERYTGQMSLYAKALSQAYQIDKI DKYLILLGGKNLEVVEA >gi|311100538|gb|AEKO01000007.1| GENE 98 96219 - 97475 504 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 418 1 422 422 478 61.0 1e-134 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLRLKKRRFQCKSCRRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGKLAFVAQNYETNELIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAKIVLDRSHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRTKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRS >gi|311100538|gb|AEKO01000007.1| GENE 99 98157 - 99101 168 314 aa, chain + ## HITS:1 COG:FN1249 KEGG:ns NR:ns ## COG: FN1249 COG2378 # Protein_GI_number: 19704584 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Fusobacterium nucleatum # 1 313 1 313 314 471 80.0 1e-132 MSSYCGKITVGDINTMKDNRLFKILYYILEKGKVTANELADKFEVSVRTIYRDIDSISSA GIPIYALQGKGGGIEIAEDFVLSKSLLSENEKQQIMSALQGLDNTTKQSENELLTKLSAL FKMKNTSWIEVDFNNWQNNKLYEKTFDDIKSAILSKNIISFTYFSSNEEETSRSVKPVRL LFKSQDWYLYALCLLRNDFRYFKLSRIKNLDIHTEKFDDSFEDILLKKEMPHENTVNIKV KFNRKVAFRVYDELNGEITEDNDGNLYTEIQIPNNHNLYNYIFSFGDGAEVLEPKEIRRQ IKEMINKMAEKYIT >gi|311100538|gb|AEKO01000007.1| GENE 100 99165 - 99779 191 204 aa, chain + ## HITS:1 COG:FN0105 KEGG:ns NR:ns ## COG: FN0105 COG4832 # Protein_GI_number: 19703453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 12 204 12 204 204 225 63.0 5e-59 MKYEWRKQEKNLYGVKQTPIIVEVPKQKFILLKGKGNPNEVDFSDRISALYSLAYAIKML FKNAMKNKTDNEITDFTVYPLEGFWKKANGEELDKNKLEYTLMIKQPDFITQEIFKKALE NVKKKKPNVLYDEISFREIEEGKSIHILHVGSYDDEPKSFELMNEFARKFDLTRIGDFHK EIYLSNKNRTSEEKQKTILRYSVK >gi|311100538|gb|AEKO01000007.1| GENE 101 100013 - 100744 658 243 aa, chain - ## HITS:1 COG:CAC1482 KEGG:ns NR:ns ## COG: CAC1482 COG1811 # Protein_GI_number: 15894761 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Clostridium acetobutylicum # 1 242 1 242 242 255 61.0 4e-68 MPTGIIINSLSIILGGIAGGLFGDYLREDFKENLNLIFGLASMVMGISAIMNMVNMPAVI FAVVIGTIIGLLLKFGNLINKGAGLMEKGLSKITPSKETGLAHDEFYAQLLTVIVLFCAS GTGIYGSLESGMTGDASILISKSILDFFTAMIFSCSLGYIVSMIAIPQFIVFFLLFLSAG FILPLTTKAMIGDFKACGGFLMIATGFRIMKLRQFPTADMIPAMILVMPISWAWVNWVVP FLG >gi|311100538|gb|AEKO01000007.1| GENE 102 101012 - 101743 249 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 215 1 222 245 100 25 1e-19 MIRFEHVTKRYENKDALSNLNLEIRDGEIFGLIGHNGAGKTTTISILTSIIEASYGEVYV DDMALSLHRDAIKKKIAYVPDSPDLFLNLTANDYWYFLTRIYDLEASQVEERLTDLMSTF DLTENRYNLISSFSHGMRQKVVVIGALLVNPQIWVLDEPLTGLDPQASYDLKEAMRNHAK EGNSVLFSTHVLSVAEQLCDRIGILKKGKLIFQGSIAELKHQYPDKDLETIYLEMAGRKI EEV >gi|311100538|gb|AEKO01000007.1| GENE 103 101746 - 103335 1173 529 aa, chain + ## HITS:1 COG:no KEGG:STER_1677 NR:ns ## KEGG: STER_1677 # Name: not_defined # Def: ABC transporter, permease protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 528 1 528 529 840 91.0 0 MNWNHVWELFKINLLYANPQAVTSLQKRQEKKKKANFSIVNAMLRQQLLILIIFTIIYSY LFVGIDYKANPGVLTLYLLTFSVMGLLQTFTALYSTFYDSKDSKVYLPLPLKPSEVFLAK TLSGFMVGMSFMVPILSLLILAYWQFIGPLGIPVGLFAFILCLFVNLVLSVVLANSIGTM IVRSSRQKLYSSILMTLSTILIMLPIMMVGFLNGYIKGAGHVNFPLLPYLRGYYDVVAAP LSPEALLNFYLPLILVLILGYWFYKVRMPRYFHEAIYNQKARKPQAKAVTRSQRQVLVRH HLSTLGNSTLIINTYVVPVLYMIMLGGGAFFLKDLGPDYFGLMLLVGIAFGFFSAQPTSF LGVATSLEGTNFDFIRSLPINTGDYLRQKFWIFYGLQVSVSLLLGGLGLIFLAHLHPVLV LSFIIGFLVTTYLAGGYFFERDLKLLEVNWQEVTQLFNRGGGQWLYMGIFVLTIFIAALL GGVVFFVSKFWIALVVNAIVSGLIAVVALIVYLFVDRRRWKRIRAMFFA >gi|311100538|gb|AEKO01000007.1| GENE 104 103456 - 104259 847 267 aa, chain + ## HITS:1 COG:SPy1672 KEGG:ns NR:ns ## COG: SPy1672 COG0263 # Protein_GI_number: 15675535 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Streptococcus pyogenes M1 GAS # 1 265 2 266 273 406 80.0 1e-113 MKRNFDSVKRLVIKIGTSSLVLPSGKINLEKIDQLAFVISSLHNKGIEVVLVSSGAMGFG LNVLDLEKRPAEVGKQQAVSSVGQVAMMSLYSQVFSHYQTKVSQLLLTRDVVEYPESLAN AINAFESLFELGVVPVVNENDAVSVDEMDHATKFGDNDRLSAIVAKVVGADLLIMLSDID GLFDKNPNVYEDATLRSYVPEITEEILASAGGAGSKFGTGGMMSKIKSAQMVFENQSQMV LMNGENPRDILRVLEGAKIGTLFKQED >gi|311100538|gb|AEKO01000007.1| GENE 105 104261 - 105511 1308 416 aa, chain + ## HITS:1 COG:SPy1670 KEGG:ns NR:ns ## COG: SPy1670 COG0014 # Protein_GI_number: 15675534 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Streptococcus pyogenes M1 GAS # 1 416 1 416 416 586 74.0 1e-167 MTYIDTLGQQAKVAGHQIAKLSTAAKNDLLNQVAKALVAESAYIITENAKDMANAKENGI SEIMQDRLLLTEDRIAGIAEGVRQVADLQDPIGQVVRGYTNLDGLKIVQKRVPMGVIAMI FESRPNVSIDAFSLAFKTNNAIILRGGRDAINSNKALVTVARKALENAGITADAVQLIED TSHEVAEELMAATKYVDLLIPRGGARLIQTVKEKAKVPVIETGVGNCHIYVDKYANLDMA TQIVINAKTQRPSVCNAAESLVVHADIAEEFLPNLEKAISKIQSVEFRADERALKLMEKA VPASPEDFATEFLDYIMSVKVVDSLDEAIDWINTYTTSHSEAIVTQDISRSEQFQDDVDA AAVYVNASTRFTDGFVFGLGAEIGISTQKMHARGPMGLEALTSTKFYINGQGQIRE >gi|311100538|gb|AEKO01000007.1| GENE 106 105541 - 105939 343 132 aa, chain + ## HITS:1 COG:lin0679 KEGG:ns NR:ns ## COG: lin0679 COG3152 # Protein_GI_number: 16799754 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 2 115 4 118 136 72 33.0 3e-13 MFKAYKKYWMGYVDFTGRSTRSDYWFAVLANILVIFAVGILAGIFIGANDGSVAGPLGTI AILLILAMLIYGLAVVLPFTAIQARRLRDAGYTWPYIFTIFIPFVGWIILLVLLCKPTKV EFPFNNFNNPQQ >gi|311100538|gb|AEKO01000007.1| GENE 107 106077 - 106508 382 143 aa, chain + ## HITS:1 COG:no KEGG:str1707 NR:ns ## KEGG: str1707 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 48 1 48 84 70 70.0 2e-11 MKLFRHLKEKRYLILAFILPAILLALAIVFLRPTHHHAEVGMRVSTKQSSSKAKAPSKSS SSTSSSSASTSSESSSSSTAPVAASQAQAGTTTTVTPAPSSVQGTYQVPQYNYAHQTTDT ESNDETSNTDPAYSSDISSTVTE >gi|311100538|gb|AEKO01000007.1| GENE 108 106702 - 107550 834 282 aa, chain + ## HITS:1 COG:no KEGG:stu1704 NR:ns ## KEGG: stu1704 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 6 243 68 307 331 323 75.0 3e-87 MMISYSKYQTAVADNQTDASINPLVVTYANSQISPASTVYTYRDLDGNGVDELVFAFKPG KLFKEHVITDIYTISKDSGQVIRLTEGPQLGMLGERMTLAYLMDNTFSYYGSAGATAGGG SGYHFSSDGQSLVKDDSDSGADEVDLSNWGWKDLSSASTESSAASQTQTSSTALKPDELK NGNYKSAVGTWKSSNGQTITITSDGQLNLWGSTYPIDKVPSNQYVSVIYTLTYVYSSPVG NAPIALCTKGVSDGSDAGDNSKDRILATNGMPSEESYFYRVD >gi|311100538|gb|AEKO01000007.1| GENE 109 107665 - 108615 1095 316 aa, chain + ## HITS:1 COG:SPy1666 KEGG:ns NR:ns ## COG: SPy1666 COG0275 # Protein_GI_number: 15675533 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 316 22 337 337 532 86.0 1e-151 MTNEFHHVTVLLHETVDMLDIKPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKA IDNAQVRLKDYIDKGMVTFIKDNFRNLRSNLEALGVFEIDGILYDLGVSSPQLDERERGF SYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQARQVKP IETTTELAEIIKSAKPAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQEALDLLAVDG RISVITFHSLEDRLTKQLFKEASTVDVPKGLPFIPEDLQPKVALVNRKPILPSQEELEAN NRSHSAKLRVAKKIRK >gi|311100538|gb|AEKO01000007.1| GENE 110 108618 - 108938 508 106 aa, chain + ## HITS:1 COG:SPy1665 KEGG:ns NR:ns ## COG: SPy1665 COG4839 # Protein_GI_number: 15675532 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein required for the initiation of cell division # Organism: Streptococcus pyogenes M1 GAS # 1 106 1 107 107 83 52.0 1e-16 MENQERQIVNRAIRNHIRFMTRMEKAFYSAIVLTAIVMSIAVVFLQGRNQAIKQQITDLN RKISDEKTELNNAKQAVNELTNSDRIKEIATKAGLSINNDSIKSVK >gi|311100538|gb|AEKO01000007.1| GENE 111 108942 - 111209 2440 755 aa, chain + ## HITS:1 COG:SPy1664 KEGG:ns NR:ns ## COG: SPy1664 COG0768 # Protein_GI_number: 15675531 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Streptococcus pyogenes M1 GAS # 4 755 1 751 751 806 59.0 0 MNRLKKLKHLFLNYVVRDRKKPAQNRQHVGQNLMVLSIFIFFVFIINFVVIIGTDSKFGV DLSTQAAKSYNTKTTVAAKRGTIYDRNGNVLAEDSTSYSIYAIVSTSYVSATREKLYVQD SQFDKVADILKDKLGIEKSDALAQLRTKGAYQVSFGLKGKGITYSVKEDLEKTFKDAGIK GMAFEATTSRMYPNGTFASEFLGRAEAVENKKDGSYSLVGQTGLERSLNSLLTGKDGEAI YEKDKDGNTLLGTETITKEAIDGKNIYTTLSAPLQTFLETQMDTFMEQTKGVNASATVVN AKTGEILATTQRPTYNSDTLEGQTKKGYDWVNRLYEAQYEPGSTMKVMLLSAAINNGSFN PNATYSNVNGIKVDDVEINDWSINEGISTGRTMSFAQGFSYSSNVGMTMLEQDMGDKVWS NYLSLYKFGLPTRFGMVGESSGIVSRNSVNIAQSSFGQGISVTQVQMLRAFTAISNNGIM LEPQFIKQVADTNQGTVRTAKKEVIGKPVSKQSASETRNYMISVGTDPEFGTLYNKSEGS PIIQVGNYDVAVKSGTAQVADEKTGTYKVGTNETLNSVVAMVPSDDPEYIIYVTVQEPQT WDNNFFATVVNPVLEEAMSMGATLDASVSDGSGKTEETSYQTGDIIGKTPGETANTLRQN LIHPIVLGVGNKIEKVSVDAKADIKANEQILIMTNDFTELPDMYGWTKKNVETFAKWKGI KITYKGGKSGTVTKQSVTAGKALSKTKKITITLGD >gi|311100538|gb|AEKO01000007.1| GENE 112 111211 - 112233 1194 340 aa, chain + ## HITS:1 COG:SPy1662 KEGG:ns NR:ns ## COG: SPy1662 COG0472 # Protein_GI_number: 15675530 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Streptococcus pyogenes M1 GAS # 1 331 1 330 336 422 70.0 1e-118 MTMSLIAGVAAFVLTVLSMPHFITYYKIKKIGGQQMHEDVKQHLAKAGTPTMGGTVFLVV AILVSLIFNFRVFTEGHQVYGATAGILFVILIYGIIGFLDDFLKIFHQINEGLKPWQKMA LQIIAGLLFYFIHVLPSGTNSLSIGGLTIHLGVFYVLFVLFWIVGFSNAVNLTDGIDGLA SISVVISLIAYGIIAFVKGEFAILTIIITMIGALLGFFVFNHKPAKVFMGDVGSLSLGAM LAVISIALRVEWTLLLIGVVYVFETASVMLQVSYFKYTKRKYGEGRRIFRMTPFHHHLEL GGLSGKGDKWSEWKVDAFLWTVGALASAITLWMVLGNVMK >gi|311100538|gb|AEKO01000007.1| GENE 113 112306 - 113649 1739 447 aa, chain + ## HITS:1 COG:SPy1659 KEGG:ns NR:ns ## COG: SPy1659 COG0513 # Protein_GI_number: 15675529 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 447 1 447 447 714 86.0 0 MSFKDFNFKAYIQKALDEIKFKEPTPVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF EKLNPESRDVQVVITAPSRELATQIYQATKQIAKHSATEIRVVNYVGGTDKQRQIEKLKV AQPHIVIGTPGRIYDLVKSRDLAIHKAHTFVVDEADMTMDMGFLDTVDKIAASLPKEVQI LVFSATIPQKLQPFLKKYLTNPVMEQIKTSTVIADTIDNWLVSTKGRNKNEQILEMLKGM QPYLAMIFVNTKERADDLHSYLVSNGLKVAKIHGGIPPRERKRIMNQVKKLEFEYIVATD LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKM GITFEPKVYKDGEFQDTYDRDRRANREKAYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV DEKRKRERRAANRAKGRAERKAKKQSF >gi|311100538|gb|AEKO01000007.1| GENE 114 114197 - 114682 388 161 aa, chain + ## HITS:1 COG:SP0061 KEGG:ns NR:ns ## COG: SP0061 COG3444 # Protein_GI_number: 15900006 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 148 1 148 158 110 37.0 9e-25 MAIVLTRIDQRLIHGITVNDWNTRLKPKRFMVIDDEISNDDVVKGSMRMSKPAGTGMSII STETAINNFKVGKYDNHDVFVIVKEPETLLKLEEAGVAFSDVNVGFLFAEGDRKPITNRI SLNDKEIGDLKELSNRGKNVSFQYRPSDEQISLKTILSKLD >gi|311100538|gb|AEKO01000007.1| GENE 115 114692 - 115483 724 263 aa, chain + ## HITS:1 COG:lin0022 KEGG:ns NR:ns ## COG: lin0022 COG3715 # Protein_GI_number: 16799101 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 4 243 5 243 267 156 40.0 4e-38 MPEILQNILIILLAGYMTWDNGSGVQLIGSWPVCTAFVMGLITGDWNTALVIGGTLQLMS LGVTALGGASIPEYGVATIVSIFIATRTGVSTGEAVAVGLPVGMLTLQLDVVVKYVNTFC AHWEQRLLHQKKFSQMQGVYILSILIWSLKYIIPVFAVIIFGAPLVNLVTKLIPTWFTTG LEVAGNMLPVLGVGLLLHYMPVKKYLSFLLIGFVLSAYLKLPILGVALLGAAFAYIIFQN ETKKSENVSYGFVDSIEGDDFDE >gi|311100538|gb|AEKO01000007.1| GENE 116 115476 - 116309 711 277 aa, chain + ## HITS:1 COG:lin0023 KEGG:ns NR:ns ## COG: lin0023 COG3716 # Protein_GI_number: 16799102 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 13 273 16 275 275 217 43.0 3e-56 MSDKFERGTVNKLTEKERKAAFRRWTFVAGLGWNYETQQAPSVAFAMAKALRKIYPNDDD YIEAMDNHFKYFNITPQMGNMVLGATLAMEEQDGLKAKDAIQNLKISLMGPLSGVGDSLF WVLWPTIIGGISGYMALQGNPIGAIIWILVSVALYFVKMALSNLGYTSGTKLVTTFGDKI NILTDAASVMGLMVVGTLIATVIKIYIPFTFKVGKVSLPFQTEVIDKIMPALLPMLLTGL VYWLLSKKWWSPVKVILLLVIISLVGAYFGILGIQPA >gi|311100538|gb|AEKO01000007.1| GENE 117 116358 - 116774 437 138 aa, chain + ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 1 128 1 128 140 85 37.0 3e-17 MKRRFLIATHSTLAEGFTNALQFFAGDEIDVTYINAYIDGKPIDEKINSFFSTLNDQDEL IVLTDLLAGSVNQNLYKYISREHTHILTGINLALALSLVLESANDYLTKERINQLVNSSR ENIVYMNEFQAEVDDDDE >gi|311100538|gb|AEKO01000007.1| GENE 118 116764 - 118464 777 566 aa, chain + ## HITS:1 COG:BH2903 KEGG:ns NR:ns ## COG: BH2903 COG0366 # Protein_GI_number: 15615466 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus halodurans # 6 563 4 556 561 563 52.0 1e-160 MTNKNEWWKNAVVYQIYPQSFKDSNNDGIGDINGIREKIPYLKDLGINVIWLNPIYESPM VDNGYDISDYYKIHESYGSMEDFDNLLKEAHDSGIKIIMDLAVCASSVEHKWFKESKKSR NNKYSDYYIWKDPKPDGSAPNNWGSIFGSGSAWEYCGEREQYYLHLFAVEQPDLNWENPD LRKEVYDNMEFWLNKGVDGFRLDSISLISKNQDFPDDPNANKNDYGSPYFGSSNGPRVHE FLQEMYDNVLSKYDVMTVGEATRTPVDKALLYCQPERKELNMVFQFDHMHVDYGKFGRYS DLKFKLSDLKETMFLWQKKLNGVGWNSLYWDNHDQPRFVSRFGNDNPKYIKQSATMLATV LYFQQGTPFIYQGDEIGMTNVSFDTIDSYKDIEAHNMYRKFSDMGLPNEEIMCYIHNKSR DNARTPMQWDTNLFSGFSHAKPWIELNPNYPEINVENDIKSEFSIHDYYKDIIKYRKESK IVREGDFKEISPEDSDIFSYTRTYEGHTLLVLGSFSDKKVCYNIPNHLKDFNRELVISNY DSNIEQNENGSTLYLRPYEAIVFYVQ >gi|311100538|gb|AEKO01000007.1| GENE 119 118492 - 119478 519 328 aa, chain + ## HITS:1 COG:SP1799 KEGG:ns NR:ns ## COG: SP1799 COG1609 # Protein_GI_number: 15901628 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 327 8 327 333 173 31.0 4e-43 MNINDVAKAAGVSRGSVSNYLNNKNVSDQMKSKIETAIKELNYVPNSSARDLRSKESKFV VFIIPTVWSPFFSELTYYIQNELNSFGYKMILCISDSDFDKEKEYIDLAESQKAAGIISI SYSQMNDFVKPGMPLVSIEKEPTGRFSMVSADNYEGGKLAAQKLIEKGAENLIYIGERYI YSDAMLSRKSGFIDYCSRNHVPYEIVEVASIKDYENVKKDISSFLKTNYNRLIEGKIGCF TSTDDYGYLLLQASNLLKISIPENIQIVGFDGGKRTINEKPVISSIRQPVDLMAKESVQL LIKLINKEVSEISRIYLPISFYEGETTL >gi|311100538|gb|AEKO01000007.1| GENE 120 119575 - 119856 103 93 aa, chain + ## HITS:1 COG:no KEGG:SMU.423 NR:ns ## KEGG: SMU.423 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 18 91 3 76 76 68 62.0 5e-11 MEKRLKQNIIKEVVTIPTQIINNFNSLNSEDLSIIEGGGVIGCVAGTAGSAGLGFLTGTS VGTVTFPIVGTVSGGAFGAWSGAGLGMATFCGV >gi|311100538|gb|AEKO01000007.1| GENE 121 120139 - 121494 1239 451 aa, chain + ## HITS:1 COG:L181858 KEGG:ns NR:ns ## COG: L181858 COG0737 # Protein_GI_number: 15672159 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Lactococcus lactis # 3 442 2 445 447 320 41.0 5e-87 MKDTIRILHINDLHSHFEQYPQLKRAVDDLSQTDRELIKVDLGDNVDKSHPLSDATAGRF NVALMNELGIDYATIGNNEGIGLAKDELDCLYEQADFQPIIGNLKDEGGQPEWAEPYLIH KTKSGTNIAFLAYTFPYYITYAPNGWQVLEPMARLEEDLARPEVKAADLVIVLSHLGVRY DEQIAETYPQVNLVIGSHTHHLFEEGKLINETYLAAADRYGYYLGCIDLTVENGQLIECQ IEAIPTKSYIFDLDKEDETFIKAMREEGHRRLAQKKVANLGRELDFDETCQLVLQAVCQE TDSQLTILNTGLIMKTLGPQVTMADLQKALPHQMRMVRLVVTGKELKEICREVFTKAELL KNQAIKGMGFRGKTFGEVITGNFAYKNGNLLYNSRVVDSNEKFSLVLVDQYYFASYFPKI KEKEVTLLFPDLLRGLVAKYLRKNGANWDKR >gi|311100538|gb|AEKO01000007.1| GENE 122 121549 - 122286 620 245 aa, chain + ## HITS:1 COG:SPy1534 KEGG:ns NR:ns ## COG: SPy1534 COG4470 # Protein_GI_number: 15675433 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 196 9 213 214 137 42.0 1e-32 MRKEILPEMFNYNKYPGPDFVYVADLLKSDAYQFTVLENHKDALDATRFGQRFSEIMLKY DYIVGDWSNDQLRLKGFYEDERPNTRKTDRISRLSEYLREYCAFGCAYFILKNEEPQLIV FEEETEPRRKRRRSNNRRHSSQESREKERNASQKNKDQKVSAKQKRDKSKRRDRDQEGPS FEKIKRRPKFKSRSEDASRERKSNFKKSQKKTSKNQHTSLKKQSNAKSAGQHFTIRKKEI KLCQK >gi|311100538|gb|AEKO01000007.1| GENE 123 122274 - 123443 1587 389 aa, chain + ## HITS:1 COG:SPy1533 KEGG:ns NR:ns ## COG: SPy1533 COG0820 # Protein_GI_number: 15675432 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Streptococcus pyogenes M1 GAS # 25 380 2 357 359 643 87.0 0 MSEVTTQAKPERRKRQKLEDMEGYKHSIYGLTRDELIDWAMEHGEKKFRATQIWDWLYKK RVQSFEEMTNISKDFIAKLNENFCVNPLKQRIVQESKDGTVKYLFELPDGMLIETVLMRQ HYGLSVCVTTQVGCNIGCTFCASGLIKKQRDLTAGEIVAQIMLVQKYFDDRGDGERVSHV VVMGIGEPFDNYDNVLRFLRTINNDNGLAIGARHITVSTSGLAPKIKEFANEGVQVNLAV SLHAPNNDLRSSIMRINRSFPLEKLFEAIEYYIQTTNRRVTFEYIMLNEVNDHPENAQEL ADLTKKIRKLSYINLIPYNPVSEHDQYSRSTKERVAAFYDVLKKNGVNCVVRQEHGTDID AACGQLRSNTMKRDRQKAVAEASGKSEGK >gi|311100538|gb|AEKO01000007.1| GENE 124 123445 - 123972 507 175 aa, chain + ## HITS:1 COG:SP0769 KEGG:ns NR:ns ## COG: SP0769 COG4767 # Protein_GI_number: 15900663 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Streptococcus pneumoniae TIGR4 # 26 167 13 154 159 135 52.0 3e-32 MFQLKTWVDKDGELTPKGRKLSRVLVCAYLLCLVLLCWTPQYGLVEGVETPGIQHFGRVV VLLTPFNSLTNFYQLDSLKEIVFVLGQNVTNIFLLSPLILGLLALYPRFRSWKKVLLATF VMSLTIEVGQVILDLLIDANRVFELDDLWTNTLGGLVALGVYRLLVKLIQTHSKE >gi|311100538|gb|AEKO01000007.1| GENE 125 124049 - 124351 292 100 aa, chain + ## HITS:1 COG:no KEGG:STER_1658 NR:ns ## KEGG: STER_1658 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 4 66 6 68 68 102 88.0 3e-21 MNKHVWNYSELKRELQLANYNTDGRYLSEATNFELYNFVREYKISDEIRRIWNPKKDELV IHDKDSYSMDGGNKVYNFDSFAYQLLESTDFGELTYIGHF >gi|311100538|gb|AEKO01000007.1| GENE 126 124451 - 126208 215 585 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 355 555 147 346 398 87 30 1e-15 MSFKESIIAKLWWFFKLEKRRYIVGILALSLVSVLNLIPPMVMGRVIDAITSGKLTNQIL LLNLVYLLLAALGMYYLRYVWRMYILATSYRLGQIMRSRLFEHFTKMSPSFYQKYRTGDL MAHATNDINSLTRLAGGGVMSAVDASITALVTLITMFFSISWQMTLVAVLPLPFMAFATS RLGRKTHKAFGESQAAFSELNNKVQESVSGIKVTKSFGYQEAELQSFQETNKMTFKKNMH TMKYDSLFDPLVLLFVGSSYVLTLLVGAFMIQAGQITVGNLVTFITYLDMLVWPLMAIGF LFNITQRGNVSYQRIENLLEQESDVQDPAHPLPSIENGRLEYAIDRFAFEDEDTLRDIHF TLDKGQTLGLVGQTGSGKTSLVKLLLREHDVNQGAIYLNGHDIRDYRLSDLRSLMGYVPQ DQFLFASSILDNVRFGNLDLAFEKVEVATKLAQVYDDIKAMPEGFETIIGEKGVSLSGGQ KQRLAMSRAMILDPDILILDDSLSAVDAKTEHAIIENLKHTRKDKTTIITAHRLSAVVHA DLILVMQDGRIIERGRHDDLLAQDGWYAKTYESQQLEMEGGEAHA >gi|311100538|gb|AEKO01000007.1| GENE 127 126201 - 127946 215 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 340 561 12 231 312 87 30 1e-15 MPNQNQWSVFKRLLTYLKPYKFLTFLALAFLLSTTVIKSIIPLVASYFIDHYLHDMNQAA SMILIGYYGLYLLQTLVQYFGNLFFARVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGSI VSRLTNDTETISEMFSGILSSFISAIFIFVTTLYTMMMLDIRLTGLIVLFLPLIVLLVNL YRKKSVVIIEKTRALLSDINAKLSESIEGIRIIQAFNQEKRLKKEFDAINEEHLIYASRS MSLDSLFLRPAMSLLKLLGYAVLMAYFGYRGIYLGITAGTMYAFIQYINRLFDPLIEVTQ NFSTLQTSMVSAGRVFALIDERTYEPEQRDTDAKVTEGNIRFENVSFSYDGKHQILDNIS FSVNKGETIAFVGSTGSGKSSIINVFMRFYEFQSGRVLLDGVDIRDYSQAELRKNIGLVL QEPFLYHGTIKSNIAMYQDLTDEEIKAAAEFVDANHFIDKLPEGYDAPVSERGSSFSTGQ RQLLAFARTVASQPKILILDEATANIDSETEAIVQNSLAKMRQGRTTIAIAHRLSTIQDA NCIYVLDKGCIIEHGSHEELLDLGGTYHKMYSLQAGAMEGA >gi|311100538|gb|AEKO01000007.1| GENE 128 128106 - 128285 212 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTQTMNNFETLDLETLANVEGGGWVKCYAGTIGSALVGSAGGPVGYWGGALVGYATFC >gi|311100538|gb|AEKO01000007.1| GENE 129 128301 - 128468 85 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFKDKKMYLLAIFLLGFGIANLFRNLDFVHHIINLVGLTLITYSLIFSKWERLKK >gi|311100538|gb|AEKO01000007.1| GENE 130 128897 - 129070 109 57 aa, chain + ## HITS:1 COG:no KEGG:STER_1644 NR:ns ## KEGG: STER_1644 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 57 15 71 71 82 94.0 3e-15 MTKKRLLSLMMSMGFVLVALHNLGEKLSFGLQCLNLIGLCLFLFLMCTVIKDIRSDK >gi|311100538|gb|AEKO01000007.1| GENE 131 129167 - 129334 105 55 aa, chain + ## HITS:1 COG:no KEGG:STER_1643 NR:ns ## KEGG: STER_1643 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 55 1 55 55 83 98.0 3e-15 MFKNSKPYLLATILIGMGLANLFRSLDAVHHTINLLGLTVLLYSLLFKKWVQFQK >gi|311100538|gb|AEKO01000007.1| GENE 132 129664 - 130065 315 133 aa, chain + ## HITS:1 COG:no KEGG:STER_1642 NR:ns ## KEGG: STER_1642 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 133 1 133 133 172 96.0 5e-42 MKLKNISSSVLRSFRTITATLAVFLISISLSLYKSKISPGTWLAVGALALVVIFVNGLLY RMLKKRPDSVNLLTIRQSFIVFLVITFLVLSVEFYTLLTFSDTTDRIVLAVLMLLLILCD FLSYLQVKKYFKQ >gi|311100538|gb|AEKO01000007.1| GENE 133 130316 - 130447 89 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MATQTIENFNTLDLETLASVEGGGCSWRGAGGTVAYGATCWWS >gi|311100538|gb|AEKO01000007.1| GENE 134 130648 - 130875 306 75 aa, chain + ## HITS:1 COG:no KEGG:STER_1641 NR:ns ## KEGG: STER_1641 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 9 75 13 79 79 80 97.0 2e-14 MITELTYNDLETLASVEGGRVNWERWGMCGASVAVGASEGFSAAAGGTAFFIGPYTIGTG AVGAAIGGGVALPGC >gi|311100538|gb|AEKO01000007.1| GENE 135 130887 - 131279 186 130 aa, chain + ## HITS:1 COG:no KEGG:STER_1640 NR:ns ## KEGG: STER_1640 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 130 1 130 130 170 100.0 2e-41 MTHRVSKRDIVLFVIAQVVSISLLVLFFSQLLHNLSSVFQLVYIVAALLVVVVDILLIRK IMTRREEPTVLNQLKASLACFLLLTLSCLRFLTTDFYYQKVIAIFVGFFSLLGFVLFLWG IKYINHNIEK >gi|311100538|gb|AEKO01000007.1| GENE 136 131749 - 131967 300 72 aa, chain + ## HITS:1 COG:no KEGG:SMU.151 NR:ns ## KEGG: SMU.151 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 6 72 12 78 78 62 49.0 3e-09 MATQTIENFNTLDLETLASVEGGGKRTADVFLSSVGGAAEGVYYCAGVGALTPYTVVGCA GIGAVVGSFFPQ >gi|311100538|gb|AEKO01000007.1| GENE 137 132000 - 132227 323 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTEELEKFLNLNDTTLSNIEGGNLSAGEVGNAFGICATAGAIIGGAFGAVPGALGGAVL GAQYCGGTWVIIRTH >gi|311100538|gb|AEKO01000007.1| GENE 138 132277 - 132690 260 137 aa, chain + ## HITS:1 COG:no KEGG:stu1674 NR:ns ## KEGG: stu1674 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 72 137 20 85 87 63 43.0 3e-09 MLHLNRLRSSTLRYLRLIIVTLGLLGGNICLELFSNGYSFLFWLPLGLVSLLFLIYLPLL IKRELSIRPVEEQNFTPKQIYAVLGLVNLGVILYAIYSICISTDEEWNNYMVILLFLDVC YLAYITPKVLKIIRKEK >gi|311100538|gb|AEKO01000007.1| GENE 139 132803 - 132982 181 59 aa, chain + ## HITS:1 COG:no KEGG:STER_1639 NR:ns ## KEGG: STER_1639 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 59 1 59 59 80 69.0 2e-14 MLIELTYKELEAIQGGAVCRMPNVNNKEGDPFKGTLVPLPRHPRDEAYPMVYLPVCAIM >gi|311100538|gb|AEKO01000007.1| GENE 140 133110 - 134036 923 308 aa, chain + ## HITS:1 COG:no KEGG:stu1676 NR:ns ## KEGG: stu1676 # Name: blpT # Def: immunity/modification protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 308 2 310 310 557 99.0 1e-157 MKKRTLTLWLMSSALLLNLSVGTALADEVVETGADNSPKVEATESTPVEQPSDSQEQSLP EDKEAPAATESVTLAESEEETANDIPAVSREEYDANVADLPKISLDDVRNAFTEDGQAHT IYFGRGTCYYCRQFSPELKVLNQLMDGRLEYYDTDREDFDRNYVFGEIGIPGTPTLLYLE NGQLLSGWVGGGPAQTVYDHLASSSPRFMTLNQEQTTISEPQTKTVRPTRVTEESTKEKS LPTVQPQPMSTVQKELNAQTGQMAPMTDKVADTKEFPKTNDGEQSLVSFVGALAILASLM LALRYYIK >gi|311100538|gb|AEKO01000007.1| GENE 141 134201 - 134497 285 98 aa, chain + ## HITS:1 COG:no KEGG:STER_1636 NR:ns ## KEGG: STER_1636 # Name: not_defined # Def: XRE family transcriptional regulatot # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 98 1 98 98 172 94.0 3e-42 MTGLKWFAGGKERREQAVAIIDEVIETIGDKPDYADLKQVLHSYRTELADSRSATPYILS RMSLEISEVVRKDQLTFSPFIEERMAELRKLLAIRYGY >gi|311100538|gb|AEKO01000007.1| GENE 142 134696 - 136963 1966 755 aa, chain - ## HITS:1 COG:no KEGG:stu1672 NR:ns ## KEGG: stu1672 # Name: pepXP # Def: x-prolyl-dipeptidyl aminopeptidase (EC:3.4.14.11) # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 755 1 755 755 1459 95.0 0 MKFNQFSYIPVSPEIACQELRSLGFGVSLDASAKANFESFVRKHFLLFEDTDLALKNWIS DPETDLLAFFQSDRPLTAEVFGLVALQLLGFVPNVDFTDSVAFLEKMAFPITFDGSLNNL HQLLATRTQSGNTLIDQLVAQDLIPISNDYVFFNGKSLATFDTNQLHREVVYVETPVDTD KDGQLDLVKVTILRPNVDFPVPAMMTASPYQQGTNEPASDKLTHKMEGDLLVKPAGEISL SQPKIKTPEADLTPINPVTKAQERFAHTDTYTLNDYMLARGVASIYVSGVGTFNSEGFMT SGDYQQVLAYKAVIDWLNDRARAFTSHSRQHTITADWASGKVTTTGLSYLGTMSNALATT GVDGLEMVIAEAGISSWYDYYRENGLLVSPGGYPGEDLDTLTEFTYSRALLAGEYLRHQK YYEAYLKALSTAIDRKHGDYNQFWHDRNYVQFADRVKATVVFTHGSQDWNVKPINVYQMF RALPDSLEKHLFFHNGAHVYMNAWQSIDFRESMNALICQKLLGLENGYTLPTVIWQNNQS EQTWEVLDNFGHDNSKNIQLGEAEASIANHYEEETFAKYGKAYQSFKDDLFADKANAITL DVELDQDIQINGRVHLELKVKSSTNRGLISAQVLEMGDKKYLAPIPSLKRMSLDNGRLFK EEALRELPFKQAKYRVITKGHLNLQNRKNLLNIENVTPNEWMTIGLDLQPTIYKLNKGDK LRLVLYTTDFEHTIRDNSDYEVTVDLSQSQMTLPY >gi|311100538|gb|AEKO01000007.1| GENE 143 137262 - 137540 233 92 aa, chain - ## HITS:1 COG:no KEGG:str1670 NR:ns ## KEGG: str1670 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 63 66 128 128 82 80.0 4e-15 MITTFLQELLFRKWIFTWLAPYSKTAVLVSTGLFCLFHMPINLAHLFLYIGMGLALSMVY QKRENLSASITLHVLWNLYTLGATILVMTITM >gi|311100538|gb|AEKO01000007.1| GENE 144 137894 - 138661 852 255 aa, chain + ## HITS:1 COG:no KEGG:str1668 NR:ns ## KEGG: str1668 # Name: cppA # Def: C3-degrading proteinase # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 255 1 255 255 466 95.0 1e-130 MEGVMTQSGNFKFHTPIFRVNNRQENIDFYQNTLGFKLLTEENALAVFTDWAEHNSLFVI EESPAYRCRAVEGPKKINKVVIKVSNPLEIEYLLARDVHQAKAIFQGENGYAFETISPEN GLILVHAEDDLSTLKTVEYADVEEKEDFKGVSDFTVQSLTLNVVDTVQAAFFYDNLFGEE LPLSIHFEKAEGPDLQVSPDQTWDLEILEFKVAEDYDLAALHEKLDKEQFSSYLDPKGSL LALTDMSNIEVWLTK >gi|311100538|gb|AEKO01000007.1| GENE 145 138661 - 139608 653 315 aa, chain + ## HITS:1 COG:SPy1850 KEGG:ns NR:ns ## COG: SPy1850 COG1680 # Protein_GI_number: 15675673 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Streptococcus pyogenes M1 GAS # 11 309 13 311 316 348 54.0 8e-96 MTNFKQTLLTITDYIKADIFPGASLALYDGKNWQEYYCGTQDGKNSVTPDLTYDLASVSK VVGVGTLCIFYLQSGKLDLDEKLSTYYPEVADKTLTLRQLLSHSSGIDPFIPNRDELDQK GLIAAINAIKVKSDKPFLYTDINFILLGLMLEKLSGQTLDKLFDIEIFQPFGMFETRFGP VELAVPTVEGVPGGTVHDPKARVLKEHTGSAGLFSTLKDLEIFVNHYLKDDFAKNLTQNI SQSKKERSVAWDLQGDWLIHTGYTGTFVLINIPRQCAGIFLSNRTYYKDERAQWIKDRDT LIEIMKKELVCETVE >gi|311100538|gb|AEKO01000007.1| GENE 146 139806 - 140219 357 137 aa, chain - ## HITS:1 COG:L67527 KEGG:ns NR:ns ## COG: L67527 COG0454 # Protein_GI_number: 15673798 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 1 132 1 146 147 115 42.0 3e-26 MIIKHTRDTLSETYLDAVAIRNTVFVKGQGIPRSIEIDAKGQATATVRLLPNIDWTQVTL QRMAVLDDYQGQGLGSILLKEAEDFAQEQSFKSISLHAQLGALKFYLNNGYQEVGQIFEE AGIQHITVEKSLISKKA >gi|311100538|gb|AEKO01000007.1| GENE 147 140304 - 140945 420 213 aa, chain - ## HITS:1 COG:BH0360 KEGG:ns NR:ns ## COG: BH0360 COG3338 # Protein_GI_number: 15612923 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus halodurans # 15 211 35 269 275 125 36.0 7e-29 MSLIAGTILLVACQSETQSKTSKPQEVQWSYAGITGPEHWGDLSKDYKLSKADKEQSHIN ITGAENVDLPELNLNNQESEGQVENELDGKTYTLVGHFVYKTYNGKIAVVSVLYNYGDKN QALQLSWDKMPQATNTETDLSQAISLDDFYPENKVYCNFEGSLTTPPCTEGVYWIVFKSQ ETVSKEQVEEFTQALGFENNRPIQDANGKKIKE >gi|311100538|gb|AEKO01000007.1| GENE 148 141236 - 143548 2377 770 aa, chain - ## HITS:1 COG:SP0459 KEGG:ns NR:ns ## COG: SP0459 COG1882 # Protein_GI_number: 15900375 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pneumoniae TIGR4 # 3 769 5 770 774 1501 94.0 0 MATVKTNTDVFEKAWEGFKGTDWKEKASVSRFVQANYTPYDGDESFLAGPTERSLKIKKI VDETKAGYEAAGRFPMDTRPTSIADIDAGYISKEDELIYGIQNDELFKLNFMPKGGIRMA ETALKEHGYEPDPAVHEIFTKYVTTVNDGIFRAYTSNIRRARHAHTVTGLPDAYSRGRII GVYARLALYGADYLMQEKVNDWNAIKEIDEETIRLREEVNLQYQALQDVVRLGDLYGVDV RRPAFDTKEAIQWTNIAFMAVCRVINGAATSLGRVPIVLDVYAERDLARGTYTESEIQEF VDDFVMKLRTVKFARTKAYDQLYSGDPTFITTSMAGMGADGRHRVTKMDYRFLNTLDNIG NSPEPNLTVLWTDKLPYSFRRYCMHMSHKHSSIQYEGVTTMAKDGYGEMSCISCCVSPLD PENEEQRHNIQYFGARVNVLKALLTGLNGGYDDVHKDYKVFDIEPVRDEVLDFDTVKANF EKSLDWLTDTYVDALNIIHYMTDKYNYEAVQMAFLPTKQRANMGFGICGFANTVDTLSAI KYATVKPIRDEDGYIYDYETIGEYPRWGEDDPRSNELAEWLIEAYTTRLRSHKLYKDAEA TVSLLTITSNVAYSKQTGNSPVHKGVYLNEDGSVNLSKLEFFSPGANPSNKAKGGWLQNL NSLASLDFGYAADGISLTTQVSPRALGKTRDEQVDNLVTILDGYFENGGQHVNLNVMDLS DVYEKIMSGEDVIVRISGYCVNTKYLTPEQKTELTQRVFHEVLSMDDALG >gi|311100538|gb|AEKO01000007.1| GENE 149 143635 - 143817 111 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASCLLSQIRFIIKIFTENFGPTKHSPPYNTKIYQKTEIYTTDFQFYKLYYKRMSLKSQF >gi|311100538|gb|AEKO01000007.1| GENE 150 143816 - 144919 1021 367 aa, chain + ## HITS:1 COG:SPy1846 KEGG:ns NR:ns ## COG: SPy1846 COG0389 # Protein_GI_number: 15675671 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 356 1 356 364 548 75.0 1e-156 MLEFPLINDTSRKIIHIDMDAFFAQVEMRDDPSLKDKPVIIGHDPRKTGGRGVVSTCNYE ARKYGVHSAMSSKEAYERCPNAVFISGNYSHYREVGMQIREIFKRYTDLVEPMSIDEAYL DVTINKLGIKSAVKVAKLIQYDIWQELHLTCSAGVSYNKFIAKLASDFQKPAGLTVVLPE EAQEFLEKLPIEKFHGVGKKSVERLHDMDIYIGADLLKIPEITLIDRFGRFGFDLFRKAR GISNSPVKPNRVRKSIGSERTYGKLLYNEDDIKAELTKNARRVAESAQKNKKVGRIIVIK VRYSDFSTLTKRMTLDKSTQDFDTIERIAHSIFDQLDENSSGVRLLGVTLTGLEEQEGRQ LDLDDLA >gi|311100538|gb|AEKO01000007.1| GENE 151 145192 - 145638 235 148 aa, chain + ## HITS:1 COG:no KEGG:str1655 NR:ns ## KEGG: str1655 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 72 148 1 77 77 118 87.0 5e-26 MLGKSSNGFSKLYRTNYETWTETNVFKKQVADTIEEKGFTPEENYTYKYIEGYNAKAPTQ VFSKFLRVRRNMIGKIQDYKLKDVKVKENEATVTFTSRSVSVHGAEAAVRTLLMSLYGIN IDKLKHWHQSDKSNDEKGKVKDLTTKFL >gi|311100538|gb|AEKO01000007.1| GENE 152 145705 - 145932 114 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477333|ref|ZP_04061971.1| ## NR: gi|228477333|ref|ZP_04061971.1| hypothetical protein STRSA0001_0259 [Streptococcus salivarius SK126] # 1 60 222 281 296 95 80.0 1e-18 MTGADNLERTFKFTEDNGGNWTISTKDYKELVEALIGHDESVSKAVYAERIHKNLSDYQP EDSSDSSNKLSGKDK >gi|311100538|gb|AEKO01000007.1| GENE 153 146217 - 147047 934 276 aa, chain + ## HITS:1 COG:L162009 KEGG:ns NR:ns ## COG: L162009 COG0834 # Protein_GI_number: 15672919 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Lactococcus lactis # 35 272 36 274 281 198 47.0 1e-50 MKKWLAGIGILGLSVLTLAACGNKSDSKVSGEKQTITVATDSDTAPFTFKKGDDFKGYDI DLVKAVFKDSDKYEVKFVTTPFDSILTGVDSGRYQIAANDFNYNEERAQKYSFSDPISRS NYAITSVEGTKYTSLDDLSGKTTEVLPGSNYAQLLENWNHANADKTPITINYASSSTGLS TRVQHIQEGKIDFILYDAISSEYIVKDQGYKLAVNKIKDDIGMKTDGLEYLLFSNDKQGK ELKTFVNKRIKELKKDGTLAKLSKEYFGGDYVSDLK >gi|311100538|gb|AEKO01000007.1| GENE 154 147482 - 148405 1057 307 aa, chain + ## HITS:1 COG:SPy1658 KEGG:ns NR:ns ## COG: SPy1658 COG0765 # Protein_GI_number: 15675528 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 53 296 13 256 267 358 76.0 9e-99 MKKSIEAFNRSPWYLQVIIGLIGLAVVVALAIPVSWLVEILWSYILQLVTIVFKWISSWM PAGKLFSWKAVFDAVPKIVEHLPLTLGLTIAGAFLGLILALVFAVVKINRVRILYPIQAV FVSFLRGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMS ETIRAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAF SAGIVEMYAQAQILGGADYRYFERYISVALVYWVISILIENIGRSVENHMAIKVPEATDI SGIGGDR >gi|311100538|gb|AEKO01000007.1| GENE 155 148405 - 149148 618 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 238 245 242 48 2e-62 MISIKNLTKEFSGQKVLDGIDIDIEKGEVVALVGASGAGKSTILRSLNYLEQPDSGTIII DDFKVDFETITKEQILTLRRKLAMVFQQFNLFERRTALDNVKEGLKIVKKLSDEEATKIA KEELAKVGLSNRENHYPRHLSGGQKQRVALARALAMKPDVLLLDEPTSALDPELVGEVEK SIADAAKSGQTMILVSHDMNFVYQVADKVLFLEKGHILEQGTPDEILNHPKEERTKEFFA SYSKQYL >gi|311100538|gb|AEKO01000007.1| GENE 156 149363 - 149587 257 74 aa, chain + ## HITS:1 COG:no KEGG:STER_1616 NR:ns ## KEGG: STER_1616 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 74 1 74 74 98 93.0 9e-20 MLLNIFKFYLLGLVIAFFVCLVLGALWLGWRALRRADKTVKERQGALYDAIMMSMVSIPV LAFAFMAILIVLNA >gi|311100538|gb|AEKO01000007.1| GENE 157 149653 - 150573 609 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 303 1 306 306 239 41 3e-61 MYDTIVIGAGPAGMTAALYAARANLKVATLEQGAPGGQMNNTSDIENYPGFESISGPELS MKMFEPLEKLGVENLYGIVSGIEDKGNYKVVKTGDEEYQTKTVILATGAKHRHIGVSGEE EYNSRGVSYCAVCDGAFFRNQDLLVVGGGDSAVEEGIYLTRFANSVTIVHRRDELRAQKV LQDRAFANEKVKFIWDSVVEEIKGDDIKVRSVDIKNVKTGEVTNHEFGGVFVYVGLDPVS DYLTGLDITDRDGWVITDDKMATRIPGIFAIGDVRQKDLRQITTAVGDGATAGIEAYNYV TALGDK >gi|311100538|gb|AEKO01000007.1| GENE 158 150986 - 151828 974 280 aa, chain + ## HITS:1 COG:SPy1854 KEGG:ns NR:ns ## COG: SPy1854 COG0580 # Protein_GI_number: 15675676 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Streptococcus pyogenes M1 GAS # 1 278 34 312 315 239 45.0 5e-63 MDITWTMKYIAEFLGTAILVILCNGVVTNVVANGNGDRKVNRLMVALGYGFGVMVSVLMF ASISGSHLNPAITVGLAASGYFEWGQVIQYVTAQFLGAIIGQLIIVVTQYKKYNTIESDH LILSTFATVSDEENRNMAWIHGGLSEFFGSFIFVFGTMFLTKHYYGSQVVEQMIAQYTQA GYNRSAVEAQASIQTGGAMTSAIIVLGLLTVGLVMIFGGGVGPALNPARDLGPRLVYTFL PNSITGEEEKNSQWWYAFVPVIIPFIASACAVFLYKYLVG >gi|311100538|gb|AEKO01000007.1| GENE 159 151873 - 152208 139 111 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 20 111 214 305 422 90 46.0 1e-18 MNTTELTGIKNPNIIISFIIDMSEANIPLARRLFSNDEIIIERSNIIHHLGRAFLKIRIA IMSQFDKKSLSYQALKNHWRLFQKDRRRLSCKSFHSKTFCHHLSPHEVIEK >gi|311100538|gb|AEKO01000007.1| GENE 160 152446 - 152985 383 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 177 13 192 199 152 42 4e-35 MRVVAGDFGGRPLKTLEGKTTRPTTDKVKGAIFNMIGPFFDGGRVLDLFSGSGSLAIEAI SRGMSSAVLVEKDRRAQAIIQENIKITKSEKQFQLLKMDAARALTQLTGQFDLVLLDPPY AKEQIVANITQLEEQGLLAEEVMLVCETDKAVDLPEEISNFGIWKQKTYGISKVTVYVR >gi|311100538|gb|AEKO01000007.1| GENE 161 153019 - 153516 272 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 3 164 4 164 164 109 35 3e-22 MTKIAMFTGSFDPITNGHMDIIARASKLFDELYIGLFYNKNKQGFWDIETRKRILEEVVA DLPNVKVITAHDSLAVDVARELGVTYLVRGLRNATDFDYEANMDYFNKGLAPELETVYLI ASHEVTPVSSSRVRELIYFEGNISSYVPQAVVKEVEAKRGKQDKI >gi|311100538|gb|AEKO01000007.1| GENE 162 153533 - 154570 393 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764799|ref|ZP_02171852.1| ribosomal protein S12 [Bacillus selenitireducens MLS10] # 4 341 13 343 350 155 30 3e-36 MWRIKWWLLSILTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVA VAQTKATLALMLYAQLNDFAKLQTAKEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLA GKEASLEYMGVYVLQVADDSSFKSVLNIADTVTAVNGKTFDNSTDLIKYVQGLKLGSKVK VTYTTDDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLDGVGGPSAGLMFTL AIYDQVSGQDLKAGRKIAGTGTIEKDGSVGDIGGAYLKVKSAADSGADIFFVPNNPVTKE MKKVDPDAKTNYQEAKEAAKKLGIKMKIVPVKTAQEAIDYLKKTK >gi|311100538|gb|AEKO01000007.1| GENE 163 154656 - 155600 801 314 aa, chain + ## HITS:1 COG:SPy0376 KEGG:ns NR:ns ## COG: SPy0376 COG1242 # Protein_GI_number: 15674523 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Streptococcus pyogenes M1 GAS # 1 305 1 304 306 561 85.0 1e-160 MKKRYRTVNDYYREIFGEKIFKLPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPEA PIREQFYHEIDFMHRKWPEVQKYLVYFQNFTNTHAPLEVIKERYEQAINEPGVVGINIGT RPDCLPDDVIDYLAELTERMHVTVELGLQTTYEETSELINRAHSYDLYVETVKRVRERAP KAEIVSHLINGLPGETHEMMVENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLKL LSQEEYVSIICDQLEIIPEDIVIHRITGDAPRDMLIGPMWSLNKWEVLNAIDKEMERRDS WQGCKAASEKEEKA >gi|311100538|gb|AEKO01000007.1| GENE 164 155597 - 156145 551 182 aa, chain + ## HITS:1 COG:SPy0377 KEGG:ns NR:ns ## COG: SPy0377 COG0500 # Protein_GI_number: 15674524 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 181 1 181 184 262 75.0 2e-70 MIKRPIHLSHDFLAEVLDDESVAVDATMGNGNDTAFLAGLAKKVYAFDVQEQALEKTRQR LSDLEIENAQLILDGHENLDRYVTEPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILD RLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRDFTAMLYQPLNQINTPPFLVMLEK LQ >gi|311100538|gb|AEKO01000007.1| GENE 165 156142 - 156384 249 80 aa, chain + ## HITS:1 COG:no KEGG:STER_1609 NR:ns ## KEGG: STER_1609 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 80 1 80 80 94 92.0 1e-18 MITDIKEKLADMQVKYIDKQSAEDTLKKVDNRKTAKIKKKLASLEVERCHKLLAKEDVTA IDKKIRKQKELFSNCCHKEG >gi|311100538|gb|AEKO01000007.1| GENE 166 156393 - 157313 809 306 aa, chain + ## HITS:1 COG:L187315 KEGG:ns NR:ns ## COG: L187315 COG0025 # Protein_GI_number: 15672365 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Lactococcus lactis # 1 302 2 302 680 281 50.0 2e-75 MHLSLALLVLFFSLILSNVINRVFPRLPLPLIQIIFEVGIGFLLKGEVFELETELFLAFI IAPLLFREGEESDITSILRNWKLILFLIFPVIFVSTLGIGYLAKAVLPASVPLSACLAIG AALGPTDLVAYSAISKRFSFPKWISYILQGEGLLNDASGLVAFQVAVTALTTGAFSLLDA SWNLVISVLGGFLVGLITALFNRLFLTILDNMDAADVTGALLLELVLPISSYFVAEEIHA SGIIAVVVAGISLASRFKKITVFDAKLDSVSHTIWGTITFMLNGMVFFLLGTELPTLATP VLSIST >gi|311100538|gb|AEKO01000007.1| GENE 167 157326 - 158459 1123 377 aa, chain + ## HITS:1 COG:SP0656 KEGG:ns NR:ns ## COG: SP0656 COG0025 # Protein_GI_number: 15900557 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Streptococcus pneumoniae TIGR4 # 75 375 1 301 302 285 51.0 1e-76 MFLAIVLLTAIMFGIRFVMISAVFAQRAWRTKRSLKKIWKGATLLTFSGVKGTVSIATIL LLPIANMTALEHSLLLFTVAGVTLLSFLIGILVLPKLATGPAHTTNHYMQIAILNDVVGE LEKDLKQSTNQGSVYATIDNYNQRLEDLVLEQESNDVKKELANIRVMIMEIESEGLEYAY KKGKISELEYNLYQRYIKGLERRINRGFVSSLSYAFAVFVRGIRRILHLALTFKFRIEQE ENRRGPRLTEENRDHMTELYLTNTEQVLEALSNLEGVYHSDLLSYLKRSRLREAEIIQSG AFVERVITHLNPDNVDEMLRGYYLERKVINEYEQAELISSRYAKQLRKEVNTLEDYSLKE TSNTLTYDMINLARRGA >gi|311100538|gb|AEKO01000007.1| GENE 168 158508 - 158636 79 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIANAIYDLLPIPTETLIVAGILVGLGLGYLFPDHDNEKNKH >gi|311100538|gb|AEKO01000007.1| GENE 169 158668 - 158829 198 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKVTVFGLIGTAVTVIIYSIPGLPKIESSLGPLFPVALLIFFTIENLMKKRL >gi|311100538|gb|AEKO01000007.1| GENE 170 159234 - 160016 186 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 19 225 147 346 398 76 25 3e-12 MSLIRLENVSLARQGKTLLSELNWTVEKGQTWAILGLNGAGKSTLLRLLTAEFFPSEGHA EILGYAFGNGDITGLRKHIGIVSSFITERLPKHMTAEKIVLTGKYKSSILYKAYGDKELQ EAKDMLTSLGAGDLIGRKYHGLSQGEKQICLIARSLMEDPDIIILDEATVGLDLFAREKL LRQIDRITSLPHAPLVLYVTHHAEEITENMDHILLLRQGKIVAQGPKNDVITPEVLADFY QNPVQIIPIDDHRFYINPLL >gi|311100538|gb|AEKO01000007.1| GENE 171 160126 - 161457 1438 443 aa, chain + ## HITS:1 COG:SPy0378 KEGG:ns NR:ns ## COG: SPy0378 COG1253 # Protein_GI_number: 15674525 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Streptococcus pyogenes M1 GAS # 1 436 1 436 444 628 77.0 1e-180 MEDSSGQSLLFQFILLLILTLLTAFFSASEMALVSLNRSRVEQKAEEGDKKFIRLLKVLE NPNNFLSTIQVGITFISLLQGASLSASLGAVIATWFGHVAWAKTAGSVVSLVILTYISIV FGELYPKRIAMNLKENLAIYSAPVIIVTGKIVSPFVWILSASTNLVSRLTPMTFDDADEQ MTRDEIEYMLTKSEDTLEAEEIEMLQGVFSLDELMAREVMVPRTDAFMIDIEDNTQENIQ AILKQSFSRIPVYEDDKDKIIGVIHTKNLLQAGYELGFENVKLRRIMNDPLFVPETIFVD DLLAAFRNTNNQMAILLDEYGGVAGLVTFEDLLEEIVGEIDDETDKASVEVREIGENTYI VEGAMTLNDFNEHFDTELESDDVDTIAGYYLTGVGAIPTQEVKEHYEVINKDKHLEFIND KVKDGRVTKLKVIITSAPEEAGE >gi|311100538|gb|AEKO01000007.1| GENE 172 162488 - 163288 1017 266 aa, chain + ## HITS:1 COG:SPy0379 KEGG:ns NR:ns ## COG: SPy0379 COG1180 # Protein_GI_number: 15674526 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 260 263 462 80.0 1e-130 MAEIDYSQVTGLVHSTESFGSVDGPGIRFIVFMQGCKMRCQYCHNPDTWAMESNKAVERT VEDVLDEALRFRHFWGEHGGITVSGGEAMLQIDFVTALFTEAKKLGIHCTLDTCGFVYRN TPEYHEVVDKLLAVTDLVLLDIKEIDPEQHKFVTRQPNKNILEFAQYLSDKQVPVWIRHV LVPGLTDFDEHLVKLGEFVKTLKNVDKFEILPYHTMGEFKWRELGIPYPLEGVKPPTADR VKNAKALMHTETYQEYKNRIGVKTLD >gi|311100538|gb|AEKO01000007.1| GENE 173 163358 - 164110 833 250 aa, chain + ## HITS:1 COG:no KEGG:str1639 NR:ns ## KEGG: str1639 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 47 202 1 156 156 215 91.0 9e-55 MFRILKFDDDFVYLSHPDGRLKKIDRTLFDFDIKLGDRIDVYQDGDLTVVTPAEVQTDLS LEGDKSVKSHLLQGILDLFLETLNIHNNHLGDLKKIFTQLLITLFMAWSLLGVILVEILL FAESIIVFLWRLLVRLIKWMRIKDNTKVLIDETQKRHAKRERQKAQRREQERRRQEELEE REYLRETERQKELMIVEASLSQEAERESLSTSLALEQAGASSQSDSEDLAEESQSTSESA VMSEAAKSEK >gi|311100538|gb|AEKO01000007.1| GENE 174 164189 - 164641 663 150 aa, chain - ## HITS:1 COG:SPy1780 KEGG:ns NR:ns ## COG: SPy1780 COG0589 # Protein_GI_number: 15675620 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 1 150 19 168 168 224 80.0 6e-59 MSQQYERIMVAIDGSYESELAFIKGVHVAKRNNAQLLLVHVIDTRALQSVATFDSYIYEK LEDEAKAVLADFERQAREAGLTKIRKVIEFGNPKSLLAVDIPDKENVDLIMVGATGLNTF ERLLIGSSSEYILRHAKVDLLIVRDSEKTL >gi|311100538|gb|AEKO01000007.1| GENE 175 165010 - 166224 1403 404 aa, chain + ## HITS:1 COG:SP1994 KEGG:ns NR:ns ## COG: SP1994 COG0436 # Protein_GI_number: 15901817 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 404 1 404 404 708 82.0 0 MKTFDKSSKLEHVAYDIRGPVLDEANRMIANGEKILRLNTGNPAEFGFTAPDEVIRDLIM NVRNSEGYSDSKGVFSARKAIMQYCQLKGFPNVDIDDIYIGNGVSEMISMSMQALLDDGD EVLVPMPDYPLWTACVSLAGGNAVHYVCDEKSNWYPDIDDIKSKITSNTKAIVIINPNNP TGALYPKDVLEQIVDIARQNDLIIFADEIYDRLVMDGKKHIAIASLAPDVFCVSMNGLSK SHRICGFRVGWMVLSGPKKNVRGYIEGLNMLSNMRLCSNVLSQHVIQTSLGGYQSVDELL IPGGRIYEQREFITNTVNDIPGLTAVKPDAGLYIFPKIDRNMYDIDDDEEFCLRLLKKEK VLLVPGKGFNWNEPDHFRIVYLPRVEELADLGNKIERVLSYYKR >gi|311100538|gb|AEKO01000007.1| GENE 176 166483 - 167268 980 261 aa, chain + ## HITS:1 COG:SPy1777 KEGG:ns NR:ns ## COG: SPy1777 COG4465 # Protein_GI_number: 15675618 # Func_class: K Transcription # Function: Pleiotropic transcriptional repressor # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 260 260 416 82.0 1e-116 MANLLAKTRKITSILQRSVDSLEGDLPYNNMAAQLADIIDCNAAIVNGGGALLGFAMKYK TNTDRVEEFFEAKQLPEEYTRGISRVYDTQENIGIDSDLTIFPVESKDDFPDGLTTIAPI YGGGMRLGSFIIWRNDHDFVDDDLILVEIASTVVGLQLLNLQTENLEETIRKQTAINMAI NTLSYSEIKAVSAILNELDGLEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLG MKGTYLKVLNEGIYDKLKEYE >gi|311100538|gb|AEKO01000007.1| GENE 177 167330 - 167881 703 183 aa, chain + ## HITS:1 COG:SP1583 KEGG:ns NR:ns ## COG: SP1583 COG1335 # Protein_GI_number: 15901425 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Streptococcus pneumoniae TIGR4 # 1 183 1 183 191 274 72.0 9e-74 MTKALISIDYSYDFVADDGKLTAGKPAQAIEDRIAQVTQEAYDNGDYIFVAMDRHDEGDT FHPETKLFPPHNIAGTDGRELYGKLAGVYDAIKDDNRVFWMDKRHYSAFSGTDLDIRLRE RRVTTVVLTGVLTDICVLHTAIDAYNLGYDIEVVESATASLTPEAHDFAIGHLKNVLGAT IVE >gi|311100538|gb|AEKO01000007.1| GENE 178 168087 - 169526 1653 479 aa, chain + ## HITS:1 COG:L121426 KEGG:ns NR:ns ## COG: L121426 COG2723 # Protein_GI_number: 15673653 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 5 475 1 471 477 739 73.0 0 MTKKLTFPNVFLWGGATAANQCEGAYDADGRGLANVDVVPIGEDRLSIITGRRKMFNFED GYFYPAKESIDMYHRYKEDIALFGEMGFKTYRLSIAWSRIFPKGDEAEPNEAGLAFYEDL FKECHKHGIEPLVTITHFDCPMHLITEYGGWRNRKMLGFYENLCRTLFTRYKGLVKYWLT FNEINMILHAPFMGAGLCFEEGENEEQVKYQAAHHELVASAMATKLAHEIDPENKVGCML AAGQYYPNTAHPRDYWAAMQEDRSSYFFTDVQARGEYPNYAKKQWERDGIELEMTEEDLA LLKEHTVDFISFSYYASRVASGDPEVNEKTAGNIFASIKNPYLEASEWGWQIDPLGLRIT LNAIWDRYQKPMFIVENGLGAVDTPDENGYVEDDYRIDYLAAHIKAMRDAINEDGVELWG YTTWGCIDLVSAGTGEMKKRYGFIYVDRDNDGNGSLKRSKKKSFNWYKEVIASNGASVE >gi|311100538|gb|AEKO01000007.1| GENE 179 169886 - 170152 286 88 aa, chain + ## HITS:1 COG:SP1770 KEGG:ns NR:ns ## COG: SP1770 COG1442 # Protein_GI_number: 15901600 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 76 49 124 404 81 50.0 4e-16 MNRRLEAIDSEILNCRVSAESFKHFSLPSAHIHYATFFRYAIPEFVQEDRVLYLDCDMIF TQDLSPLFGVNLGGFSYKSRCPCPSKRT >gi|311100538|gb|AEKO01000007.1| GENE 180 170331 - 170603 319 90 aa, chain + ## HITS:1 COG:SA2441 KEGG:ns NR:ns ## COG: SA2441 COG0438 # Protein_GI_number: 15928234 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Staphylococcus aureus N315 # 1 86 410 496 502 84 43.0 4e-17 MEAVGAGLALVGFDARYGNPTFIKDGENGYLVPYSETMDEDLLVSQMADKIVFALESDLE SIHQISYDLAKQYLKPEILEAWRKLLIAIR >gi|311100538|gb|AEKO01000007.1| GENE 181 170743 - 171045 457 100 aa, chain + ## HITS:1 COG:SP0438 KEGG:ns NR:ns ## COG: SP0438 COG0721 # Protein_GI_number: 15900356 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 100 1 100 100 157 92.0 6e-39 MKITQEEVTHVANLSKLKFSPEETAEFATTLSKIVDMVELLEEVDTTGVAPTTTMADRKT VLRPDVAEKGTDRDRLFKNVPEKDNYYIKVPAILEDGGDA >gi|311100538|gb|AEKO01000007.1| GENE 182 171045 - 172511 401 488 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 15 471 16 452 468 159 28 3e-37 MSFNNKTIEELHDLLVSKEISATELTQATLDDIKEREEAVNAFVTVAEETALAQAKAIDE KGIDADNLLSGIPLAVKDNISTDGILTTAASKMLYNYEPIFDATAVANAKAKDMIVIGKT NMDEFAMGGSGETSYYGATKNAWDHSKVPGGSSSGSAASVASGQVRLSLGSDTGGSIRQP AAFNGIVGLKPTYGTVSRFGLIAFGSSLDQIGTFSPTVKENAQLLNVIASEDAKDSTSAP VRVADFTSKIGQDIKGMKIALPKEYLGEGIDPEVKETILNAAKHFEKLGATVEEVSLPHS KYGVAVYYIIASSEASSNLQRFDGIRYGFRAEDAKNLDDIYVNTRSQGFGNEVKRRIMLG TFSLSSGYYDAYYKKAGQVRTLIIQDFEKVFADYDLILGPTAPSVAFDLDSLNHDPVAMY LADLLTIPVNLAGLPGISIPAGFAQGLPVGLQLIGPKYSEETIYQAAAAFEATTDYHKQQ PLIFGGDN >gi|311100538|gb|AEKO01000007.1| GENE 183 172511 - 173953 1630 480 aa, chain + ## HITS:1 COG:SP0436 KEGG:ns NR:ns ## COG: SP0436 COG0064 # Protein_GI_number: 15900354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Streptococcus pneumoniae TIGR4 # 1 479 1 479 480 902 95.0 0 MNFETVIGLEVHVELNTNSKIFSPTSAHFGNEQNANTNVIDWSFPGVLPVLNKGVVDAGI KAALALNMDIHQHMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEVQLEDGSTKKIGIE RAHLEEDAGKNTHGTDGFSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEVIQYIG ISDVKMEEGSMRVDANISLRPYGQEEFGTKTELKNLNSFSNVRKGLEYEVQRQAKILRSG GVIRQETRRYDEANKSTILMRVKEGAADYRYFPEPDLPLFEISDDWIEEMRTELPEFPKD RRARYVAELGLSDYDANQLTATKVTSDFFEAAVALGGDAKQVSNWLQGEVAQFLNAEGKT LEEIKLTPENLVEMIAIIEDGTISSKIAKKVFVHLAKNGGGAREYVEKAGLVQISDPEVL IPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVALKLLAQELAKLKEE >gi|311100538|gb|AEKO01000007.1| GENE 184 174600 - 174866 104 88 aa, chain - ## HITS:1 COG:no KEGG:smi_0596 NR:ns ## KEGG: smi_0596 # Name: not_defined # Def: transposase # Organism: S.mitis_B6 # Pathway: not_defined # 21 88 80 147 147 99 73.0 3e-20 MKVLAFKDTHTSRKEIDISGRALTMSGLIPAHSKDSEFSSFYSKTSQRGSNMKAVIACAH KLLRIIYKTLATHQEYNKEKMLGLRQQF >gi|311100538|gb|AEKO01000007.1| GENE 185 175007 - 175234 240 75 aa, chain - ## HITS:1 COG:no KEGG:smi_0597 NR:ns ## KEGG: smi_0597 # Name: not_defined # Def: transposase # Organism: S.mitis_B6 # Pathway: not_defined # 2 75 180 253 253 104 70.0 9e-22 MLFINGKLIDYDNVTACIHKHVKANPEELMEAMNGKLSLEDRFFLDKSLEEYQLYQNLMN KLTSEIIAYIEKEFP >gi|311100538|gb|AEKO01000007.1| GENE 186 176269 - 176544 196 91 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 91 158 248 422 127 61.0 4e-30 MSWDEFGFKKSELAFVAQNYETNKLITILDNRRQTTILNHFLKYPLKVRQKVQFITMDMS GAYIPLARRLFPNAEIIIDRFHIIQHLGRAF >gi|311100538|gb|AEKO01000007.1| GENE 187 176562 - 177065 335 167 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 164 256 419 422 174 58.0 4e-44 MNQFDKKSLPYRALKNHWRLFQKDSRKLSCKSFHSKTFGQTLSPHEVVRKTLDFSEEFAN YYNLYQLLLFHFQEKRVDEFFELIEENISKVNYYFKTVFRTFLRHKPYIKNALETHYSNA KLEGTNKLIKDIKRLGFGFRNFINFRKRVFITLNIQKEKTYQVLFRC >gi|311100538|gb|AEKO01000007.1| GENE 188 177190 - 177903 817 237 aa, chain - ## HITS:1 COG:lin1574 KEGG:ns NR:ns ## COG: lin1574 COG0580 # Protein_GI_number: 16800642 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Listeria innocua # 1 226 6 232 272 135 37.0 7e-32 MTHQLLAEVMSTALMIIFGVGVHCDDVLKKTKYAGTGHLFAITTWAFGITVCLFVFGGVS MNPAMALLKLLLGKLTIAQFFPIAIAEMIGAFLGALIAYFMYADHFKASEGQIDGVAIRN IFSTNPNCRNLPRNYFVEAFATFIFLTSIMAAEHANEELLPFTVGLIVWAIGMGLGGTTG FAMNQARDLGPRFAYQILPIKDKVNNDWQYGLLVPGTAPFVGAVLAFFFIRYFLGIM >gi|311100538|gb|AEKO01000007.1| GENE 189 177924 - 179183 1161 419 aa, chain - ## HITS:1 COG:TM0964 KEGG:ns NR:ns ## COG: TM0964 COG1641 # Protein_GI_number: 15643724 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 1 418 1 395 402 238 36.0 2e-62 MTSLFLEPFSGISGDMLNGLLVDLGGDVTLLRSELEKLGIDGFHLHVDHIAKSAIWGTDF DVHLHHVEKDTGIEGDFDHKHHHDHEHGHSHADARSYADIHDLIAASQLSPFVKEKSLAV FLDIAKAEAAVHNMPVEQIHFHEIGAIDSIVDIVSFFILVESLGIDTVYSTPLTEGSGTI SVAHGEMPVPVPAVIQLRKGITIPITQDFTVKTELITPTGLALLKALDPIFEPIPSHFAI QSVGYGFGKRDTGKFNALRGSLLKEDASHSTTNVHHTDDYIVEITTTIDDQTPEQLAYIL NRFLDAGALDVYYRSIVMKKNRPGFELTLLIQNTQLEDFSTLLFKETSTIGFRYQQIDRK VMQRRFEQIDTEFGTVTVKINQYGSITKKTLEYEDCQRIAKKMQLPIQEVYNQLQKYIY >gi|311100538|gb|AEKO01000007.1| GENE 190 179180 - 179950 631 256 aa, chain - ## HITS:1 COG:CAC0776 KEGG:ns NR:ns ## COG: CAC0776 COG1691 # Protein_GI_number: 15894063 # Func_class: R General function prediction only # Function: NCAIR mutase (PurE)-related proteins # Organism: Clostridium acetobutylicum # 11 248 10 248 248 245 54.0 7e-65 MDFQPNLEQTLRDLQAGHLSVEDALEQINGVKELGYAAIDTDRQRRNGFPEVIFGEGKTV EQMEGIMQFLLQKELPILATRVSLQKGEALSQLFPNGHYYPEARCFILNSKKEEVDAEHY IAIVTAGTSDVPVAEEAAVTAETFGHAVHRIYDVGVAGIHRLFRRLDEIQKASVVIVIAG MEGALVSVVGGLVDVPVIAVPTSIGYGSNLQGLTTLMSMLTSCASGVTVVNIDNGFGAAY SACMINRLNHNRKENE >gi|311100538|gb|AEKO01000007.1| GENE 191 179959 - 181233 1318 424 aa, chain - ## HITS:1 COG:CAC0769 KEGG:ns NR:ns ## COG: CAC0769 COG3875 # Protein_GI_number: 15894056 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 424 4 426 426 650 76.0 0 MVEIKLPYDKKTIVAKIPDENFAGLLESKAENFHNPLSEEETVERSLDNPIGSPSLEELA KGKKDIVLISSDHTRPVPSHIITPIILRRIRSVNPDARVRILVATGFHRPSTREELINKY GQEIVDNEEIVMHISTNDDDMVKIGQLPSGGDCIINKIAAEADLLLAEGFIESHFFAGFS GGRKSVLPGIASYKTIMANHSGDFINSDKARTGNLDHNPIHEDMLYAARTAKLAFIVNVV LDGEKHIIGSFAGDMVEAHKVGCEFVADLAHVSKVESDITISTNGGFPLDQNIYQAVKGM TAAEASNKEGGTIIMVAGCADGHGGEGFYRNLADVKDPKDFLEQAINTPRLETVPDQWTS QILARILVHHHVIFVSDLVDPALITGMHMELATSFDEALEKALAREGKDAKVTVIRDGLS VVVE >gi|311100538|gb|AEKO01000007.1| GENE 192 181402 - 182073 559 223 aa, chain + ## HITS:1 COG:L0245 KEGG:ns NR:ns ## COG: L0245 COG0664 # Protein_GI_number: 15674216 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Lactococcus lactis # 3 218 12 227 228 208 48.0 5e-54 MLVNSEFLVNFLEERRTPIIKKKYHSYLSYRGVKDDYIYILKEGIVKTSVIMHDGREYSF SYLKAIDIVSLIRDEVSNYSNSAFNVRVETDEASFYRISRVKFWNFVKEQKELQDYVLDY YCHKLSESMEAQQYMMMNGKKGAVCFQLQKLSGLFGVEQEDGVLIDFNITNEDIAGFCGI STRNSVNRILNELKREGVLDIRQQKIVILDNERIEEFIGRELF >gi|311100538|gb|AEKO01000007.1| GENE 193 182075 - 182923 789 282 aa, chain + ## HITS:1 COG:alr1286 KEGG:ns NR:ns ## COG: alr1286 COG1606 # Protein_GI_number: 17228781 # Func_class: R General function prediction only # Function: ATP-utilizing enzymes of the PP-loop superfamily # Organism: Nostoc sp. PCC 7120 # 10 273 4 268 275 172 36.0 7e-43 MATEAQIRQEKEEKLQDILRQIGKVAVTYSGGIDSSYLLKVALDTLGPDNVIAAVVNSEM FSNEEFDLALDLADQLGAPVLGLEMRELSDPRIAANTPNIWYYTKQLMYQTIKDSVTELG FEQLVDGMIMDDINDFRPGIKARDEAGVRSVLQEAGLYKTEIRQLAKERGVSNWNKVPSC SVASRFPYGVKITSENVQRVFEGEEFLVGLGFEQARVRVHGDLARIEVEEDRLLEAIQLH DKINDYMKKIGFTYVALDLAGYKYGRMNDSLDEKTKEKIMAG >gi|311100538|gb|AEKO01000007.1| GENE 194 182927 - 183451 427 174 aa, chain + ## HITS:1 COG:SMc04178 KEGG:ns NR:ns ## COG: SMc04178 COG3803 # Protein_GI_number: 15965760 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 2 174 64 239 239 139 42.0 2e-33 MQEVIRFWFEELKPEDWFKKSDALDQEMRVRFEELYWKANRGELFSWRASDQGRLAEILL LDQIPRNIFRGTAQAFATDSLALVLAQEGLEQALDLPVVQRGFFYMPFMHSESLVIHEEA LRLFDQPGLEKRLKYEKMHVEILRQFGRYPHRNAILGRPSTKEEEEYLKEHAGF >gi|311100538|gb|AEKO01000007.1| GENE 195 183438 - 184991 1312 517 aa, chain + ## HITS:1 COG:FN1523 KEGG:ns NR:ns ## COG: FN1523 COG0747 # Protein_GI_number: 19704855 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 10 514 3 522 526 222 29.0 1e-57 MQAFKRKKGYWVKLCWALLLAGLCLLGLRSYQGAQGKTVSSRDTVTMGYTQFPANVDPVK EYNGWFTVRYGVGETLFKMNDQLQIQPWLATKGVQLSPLEWEITIRQGVHFHDGSLMTPK TVKESLEHLLASNQRAAGELMIEQITATDQSIRIKTKDPQPILLNLLADPYSTIIHVGAK ESTGKSVVATGPYQMTAFRPENGASLKAFHNYWNGAPKVQKVEIHSFSDATSMSLALDAG EIDAAYGMPALNLASYRQKKGYRISEVDGSRYLSYVYNFRDPWMQDKTLRKALDLVIDRN TYSQSLFQKGSQATSGPFPSRFPFALEEPVPNANAKEAEKLLDQAGYLKKADGFRYKDGK KVTLTALSYDRLPEIPLAVQATQASLKQIGIDVKIRTVEVGSIAAAEDYSFTPYTMVATP VGDPYPFFKSSLASDGSVNLGKYKSAKVDRLIQALAIEGNQEKRQELSKDLQREIKEDLP ISFLVTFKVAVIMNDRVSGLTSSASDYYHITNQLKKE >gi|311100538|gb|AEKO01000007.1| GENE 196 184994 - 185779 289 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 244 8 260 563 115 29 1e-56 MLELQHVTVQSQDRIIIEDLSFQLKKSQSLAIVGESGSGKSTLLKILLGLPLRDLWIAKG QYSWQGKEQLQQSTPYPFVGNEMAWVSQQAGRFFYDRRTIENHYKDLVNSLKGRTSKVRS LKECMDLVSLDMKKVAPAYPFELSGGMMQRVAIALSLVSYPKILLADEPTSALDVVTKLE IVDLLDRLKREEGLALLLVTHDMAVAAALTDQMLVIREGQVIEQGPTAQLLQSATEDYTR ELLAATPRLRKGASDGHNIDL >gi|311100538|gb|AEKO01000007.1| GENE 197 185757 - 186539 353 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 23 253 38 276 329 140 34 1e-31 MGTILTCKNLQFTYRNSASGMQVGPISFELEEGESFGIVGESGSGKTSLSHLLCRFITPD QGQLYLQGRSFEEFSTKEFYQTIQYIDQHPHASFHPARSVYSSLMEVCDHFDQATTKAEK EKAVEEVLDAVHLNCHLLQQRPQFLSGGECQRAAIARALLIKPRILVCDEMTSALDMTIQ AELMRLMEQLKDCYQMNFVFISHDLALVSQFCQQILVLKDGQVKEMGRTSDCLSAPQNPY TQELLDTYQKQERWLNKCFD >gi|311100538|gb|AEKO01000007.1| GENE 198 186527 - 187477 494 316 aa, chain + ## HITS:1 COG:BH1797 KEGG:ns NR:ns ## COG: BH1797 COG0601 # Protein_GI_number: 15614360 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 1 310 1 310 315 166 33.0 5e-41 MFRLSCKLLLRFFLILLGVSLISFLLMYLAPGDPAKNMLASQGIPFTKELLEAKRLEFGF QDPFWVQYGRWLLGVFHGNLGITYHSGSSVAKELAFYFPNTLFLAGFTLFLTLLISIPLS FISVFYKKSLISKVISFATALANTIPNFVLGIGLMVVFSLYLHLFPIQSTVDLKGVVLPA LTLAVTMSSRYIPQLQEGVTGILESDAVLGAMGRGLRRGQILGTTIFPQLFPLLLTLITL SLTSLLGGVAVIEYLFSWPGIGKMLITAVHNRDFPLIQGSVLVITTSVLLVNTVAEFIQL IINPKRKRKEGANHVI >gi|311100538|gb|AEKO01000007.1| GENE 199 187467 - 188294 816 275 aa, chain + ## HITS:1 COG:MA3907 KEGG:ns NR:ns ## COG: MA3907 COG1173 # Protein_GI_number: 20092703 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Methanosarcina acetivorans str.C2A # 7 264 27 286 299 150 33.0 2e-36 MSSDQIKRNIRWVLGCLIAFLVFLVLVQWFGFDQANRVDLPNVLAAPSRQALFGKDELGR DLFVRVFVGGAHTLLPSLLALILVVLFGCFMGVLSVRFGGIVDRFVQVAITLFQAFPPII FVIGVVGFLGLGMEQTLLAICLTSWTKYAYLVRSLLLDSKEEPYFRYADMFGNTFWSKIK LYYLPSVFPQVVTTMVYDLNTIIMEIAGMSFIGLGAQMPYAEWGAMINNGRSYLQIAPWI VAFPSLFLILFIGGVMYLGRLLKQYFAIQQEYKRS >gi|311100538|gb|AEKO01000007.1| GENE 200 188307 - 188840 451 177 aa, chain - ## HITS:1 COG:MA3459 KEGG:ns NR:ns ## COG: MA3459 COG0500 # Protein_GI_number: 20092272 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 1 169 80 243 249 96 30.0 2e-20 MLQIAQENLLQYRKNSSTVRYLQMNAQELDFEPESFDVIIMRNVTWNLENPEKAYEAWLR TLKPGGQLLIYDANWYSYLNDPAIRSQFENNLKIVSSEQLEDYWHGEGVDEALIEEIARQ LPLTKRLRPAWDLEFLNQFEEVEATVDTEFGPKIWSREEELNYAATPMFALYITKRS >gi|311100538|gb|AEKO01000007.1| GENE 201 189348 - 189731 263 127 aa, chain + ## HITS:1 COG:no KEGG:str1624 NR:ns ## KEGG: str1624 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 127 1 127 127 186 86.0 2e-46 MNKFLRVLFILVILAMTGAIIFQLFFPTYMGNHSGYGISVGWQRKIGIWNVAVLIILLAV NLKYDWFYLRAVLIALIIGGLVIGTNHFLSYLQHHHSVNAIGVLENYLLVFGWVVGWSLE NSSRKTV >gi|311100538|gb|AEKO01000007.1| GENE 202 189807 - 190724 780 305 aa, chain + ## HITS:1 COG:SP1447 KEGG:ns NR:ns ## COG: SP1447 COG0697 # Protein_GI_number: 15901297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 294 1 294 298 265 56.0 6e-71 MSKQLKGSLMVLTAGIAWGFSGVSGQYLMAHGVNVNLLTSLRLLLSGILLTASVFFRQRD KLVQAIKDRKTLVSIALFALFGLVLNQYAYLSAIQYTNAGTATVLQYVTPVIILAFVCAK YRRFPTAAELVAIILAIVGTFTIATHGQIRELAITPLGLFWGLFSAVTYAIYILLPAKAI EKWGSLIVIGLGLLIGGLIFPIVIQAWKYKLSLTGGNLLALFGLIFIGTVFAYTVFLKGT TMVGAVKGSLLASVEPIASVILTVLIMGDRFFAIDVVGMFLIVLAVIIISLKNLVTLKKQ EKIQR >gi|311100538|gb|AEKO01000007.1| GENE 203 190892 - 191389 532 165 aa, chain + ## HITS:1 COG:SPy0305 KEGG:ns NR:ns ## COG: SPy0305 COG2179 # Protein_GI_number: 15674472 # Func_class: R General function prediction only # Function: Predicted hydrolase of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 165 30 194 194 250 74.0 7e-67 MVEAVYDLKPDQLREHGIRAVLVDLDNTLIAWNNPDGTPELRAWLDEMTEADIPVVVVSN NKHERVERAVANFHVDFVSRAMKPFTKGINEAIERYHFNRDEVVMVGDQLMTDIRASHRA GIRSILVKPLVKSDAWVTKFNRWRERRMWKKIEKAYGPMTFNKGI >gi|311100538|gb|AEKO01000007.1| GENE 204 191389 - 192507 1060 372 aa, chain + ## HITS:1 COG:SPy0306 KEGG:ns NR:ns ## COG: SPy0306 COG1161 # Protein_GI_number: 15674473 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Streptococcus pyogenes M1 GAS # 1 372 1 372 372 667 85.0 0 MEELFCIGCGAQIQTEDKEKAGFTPASSIKKAEETGELYCQRCFRLRHYNEIVDVHITDD EFLKLLHEVGDSDALVVNVVDIFDFNGSIIPGLSRFVSGNDVLLVGNKKDILSKSVKDGK VTQWLTERAHEEGMRPVDVMLTSAQNHHAIKELIQRIEKLRKGRDVYVVGVTNVGKSTLI NAIIKEITGDKDIITTSRFPGTTLDKIEIPLDDGTYIFDTPGIIHRHQMAHYLSAKDLKY VSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGFTAFFDNNLKLHRTKLEGADAFY DKHVGSLLMPPGPKELANFPKLVRHEFTVKDKTDIVFSGLGWIRVQGKADQPTIVAAWAP EGVGVVVRKAII >gi|311100538|gb|AEKO01000007.1| GENE 205 192537 - 192854 504 105 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821596|ref|YP_140038.1| hypothetical protein stu1620 [Streptococcus thermophilus LMG 18311] # 1 105 1 105 105 198 98 4e-49 MSLTSKQRAFLKSEAHTLKPIVQIGKNGLNDHIKTSVRNALDARELIKVTLLQNTMEDIY EVAEILEEEIGCDTVLKIGRILILYKESAKKENRKLSPKVKAIQK >gi|311100538|gb|AEKO01000007.1| GENE 206 192926 - 193558 787 210 aa, chain + ## HITS:1 COG:SP1747 KEGG:ns NR:ns ## COG: SP1747 COG1057 # Protein_GI_number: 15901579 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 209 1 209 209 337 79.0 1e-92 MALDLVTPFTKVQLEEEIKDTGRKQVGILGGNFNPVHNAHLVVADQVRQQLGLDEVLLMP EFEPPHVDKKETIDEQHRLNMLMLAINGIEGLDIETIELERKGISYTYDTMKLLTEANPD TDYYFIIGADMVDYLPTWHRIDELIEMVQFVGVQRPKYKAGTSYPVIWVDVPLMDISSSA VRAYIKKDRTPNFMVPQSVLAYIKKAGLYK >gi|311100538|gb|AEKO01000007.1| GENE 207 193555 - 194148 556 197 aa, chain + ## HITS:1 COG:SP1746 KEGG:ns NR:ns ## COG: SP1746 COG1713 # Protein_GI_number: 15901578 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Streptococcus pneumoniae TIGR4 # 1 197 1 197 197 274 69.0 9e-74 MTYEKYLDYSREELLEKVRAVMSPKRFNHVLGVERAAITLAEKYEYDTEKAGLAGLLHDY AKELPDQEFLELIDKYKLDPELKKWGNNVWHGMVGIYKIQEDLGLTDSDILRSIEIHTVG SHEMSTLDKIVYVADYIEHNRNFPLVEEARQVAEQSLDKAVAFETVHTVEHLAHQALPIY PQTLETYNAFVHCLKED >gi|311100538|gb|AEKO01000007.1| GENE 208 194152 - 194652 273 166 aa, chain + ## HITS:1 COG:SP1745 KEGG:ns NR:ns ## COG: SP1745 COG1335 # Protein_GI_number: 15901577 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Streptococcus pneumoniae TIGR4 # 1 166 1 166 166 263 83.0 1e-70 MKTAFIIIDVQNILVETGFETQKLLEKISYLQDQARKQQIEIIYIQHIETEEALTSEDWK LSPLLKRQSDEKVFQKRYNSIFKETGLKEYLDQQGIEKLVLCGMQTEYCVDTSVKVAFEH GYKLVVPEGTVTTFDGDDIPAETINDFYENIWDERFADVLDYKTIF >gi|311100538|gb|AEKO01000007.1| GENE 209 194667 - 195017 471 116 aa, chain + ## HITS:1 COG:SPy0310 KEGG:ns NR:ns ## COG: SPy0310 COG0799 # Protein_GI_number: 15674477 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Streptococcus pyogenes M1 GAS # 2 116 11 125 125 160 77.0 6e-40 MKEELLELVVKAADEKRAEDIVALDLYGLTSLTDYFVILSAMNSRQLEAIADNIREKVKE AGLDASHMEGDNKGGWILLDLNDVVVHIFTEDERAHYNLEKLWHEAPMMDVSAYLA >gi|311100538|gb|AEKO01000007.1| GENE 210 195341 - 196081 629 246 aa, chain + ## HITS:1 COG:SP1743 KEGG:ns NR:ns ## COG: SP1743 COG0500 # Protein_GI_number: 15901575 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 246 3 248 248 436 92.0 1e-122 MATYETFAAVYDAVMDDSLYDLWTDFSLRHLPKTKDKKKLLELACGTGIQSVRFSQAGFD VTGLDLSADMLKVAQKRASSAKQKIDFIEGNMLDLSQAGKYDFVTCYSDSICYMQDEVEV GDVFKEVYNALNEDGVFIFDVHSTYQTDEVFPGYSYHENAEDFAMLWDTYEDAAPHSIVH ELTFFVQEEDGSFSRHDEVHEERTYEVLTYDILLEQAGFKSFKLYADFEDKEPTETSARW FFVAQK >gi|311100538|gb|AEKO01000007.1| GENE 211 196088 - 197179 827 363 aa, chain + ## HITS:1 COG:SP1742 KEGG:ns NR:ns ## COG: SP1742 COG1323 # Protein_GI_number: 15901574 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 363 1 363 365 554 70.0 1e-158 MTVTGIIAEFNPFHNGHKYLLDQAEGVKIVAMSGNFVQRGEPAIVDKWTRAQMALENGAD LVVELPFLTAVQSADYFAAGAVDILSRLGIDSLTFGTEEVLDYQAIADVYAEKSEDMEAF VENLPSDLSYPQKTQKMWEKFAGVDFTGNTPNHILGLAYAKACAGKGIKLNPIQRQGAGY HSSDKEVSFASATSLRLHKQDSDFVDKFMPNSKLFQTSPQVSWDNYFQLLSYQILTNPDL TTIFQVNEEIASRLKAVIREVSSVEELVDKVATKRYTKARVRRILTYILVEAVDNPLPQA VHVLGFSQKGQSHLKSVKKSVDIVARIGREPWDLLTQQGDNVYQLGNPELSEQNFGRVPI RVK >gi|311100538|gb|AEKO01000007.1| GENE 212 197913 - 200018 1467 701 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 45 699 136 813 815 569 44 1e-161 MNNNFNNMDDLFNQLMGNMGGYRSENRRYMINGREVTPEEFAIYRQTGQLPGNEGEAVNP TQQQGKGPKQDGILAKLGRNLTEEAREGKLDPVIGRNKEIQEACEILARRTKNNPVLVGD AGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGTQYRGSFEENIQNLVNEVK EAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGELTVIGATTQDEYRNTILK NAALARRFNEVKVNAPSAEDTFKILQGIRDLYEKHHNVILPDDVLKAAVDFSVQYIPQRS LPDKAIDLVDVTAAHLAAQHPVTDVNAVEHEIEEEKAKQEAAAAKEDYEAALNAKVRIEE LEKKIANHTEDLKVTATVNDVAESVERMTGIPVSQMGATDIERLKDMGHRLQTKVIGQDK AVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMS EYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVL DDGRLTDGQGNTVNFKNTVIIATSNAGFGYEANLTEDADKPELMDRLKPYFRPEFLNRFN AVIEFSHLSKEDLSKIVDLMLVEVNKTLSKKDIDLAVSEAAKEYMTEEGYDEVMGVRPLR RVVEQQIRDKVTDFHLDNLDAKHLEADMEDGVLVIKEKDAE >gi|311100538|gb|AEKO01000007.1| GENE 213 200350 - 200928 380 192 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_1634 NR:ns ## KEGG: SmuNN2025_1634 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 52 192 36 180 180 92 40.0 6e-18 MKKKNCLFTFSVILLSIALTGCSASKNLINTAKNISGGVTSKSSSSSTTSSSSSSSITSS SSSSSSSSTTSSSSTISSSSSSVSSSNFNPQDTSDATIRSISTYNDYITMYSKIVDEYLT NYQNAVAGTVLDDANTIEQMKQETLKSLEEQKKEYGAMGNTKIIGKDSLVEFLKNYRNGL KEYTDNISTQIQ >gi|311100538|gb|AEKO01000007.1| GENE 214 200947 - 201291 324 114 aa, chain + ## HITS:1 COG:no KEGG:lp_0629 NR:ns ## KEGG: lp_0629 # Name: not_defined # Def: prophage Lp1 protein 6 # Organism: L.plantarum # Pathway: not_defined # 1 113 1 117 122 83 59.0 3e-15 MKTKTLAVTNGVVGLIGGIFLLFAFWFIVGVASSGSEAAIVLMTLFVYLVKLALLVLGIV GAVYYKGDTPVGTAPSVLLIVGGAISLIPFLGWIGGILGIIGASLYLASLKKFL >gi|311100538|gb|AEKO01000007.1| GENE 215 201329 - 201679 167 116 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLFWPMLFFMAFVVIIMIFATISEVINKLGNIAKWIGLGAIAGNVINNKINSDTAIKQG RTWRKSRKNRNNGFLDDFEEFVSPSYESDEEHELSDEESFREYQEFKKWKATQKGK >gi|311100538|gb|AEKO01000007.1| GENE 216 201696 - 201995 358 99 aa, chain - ## HITS:1 COG:no KEGG:STER_1574 NR:ns ## KEGG: STER_1574 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 99 1 99 99 148 92.0 6e-35 MKLGRFLALGTLAYGAYYAYKRREDIKEGILDLNQSRENISHDLDRIKRNLDIIKEQNLV LDDIKQDLSYKTRIFQKDLEPRLSIIQEHLKKYQSEDKE >gi|311100538|gb|AEKO01000007.1| GENE 217 201992 - 202411 496 139 aa, chain - ## HITS:1 COG:SPy1730 KEGG:ns NR:ns ## COG: SPy1730 COG0537 # Protein_GI_number: 15675580 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Streptococcus pyogenes M1 GAS # 1 138 1 138 139 203 69.0 8e-53 MDNCIFCKIISGEIPSSKVYEDDKILAFLDISQATKGHTLVIPKEHVRNILEMSAETAET VFSRVPKIARAVQKATGAIGMNILNNNEEVAGQTVFHAHIHLVPRYGADDGIHMGFDEHE PDFAALADLADSIAKEVTE >gi|311100538|gb|AEKO01000007.1| GENE 218 202476 - 203207 263 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 219 1 226 245 105 25 3e-21 MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAI DELTIQQDPASYRQKIGYIPETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLF RLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLLIVDEPFLGLDPLAISDLIELLAEEKA KGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGNDSASLNDIYMQLTKG ELS >gi|311100538|gb|AEKO01000007.1| GENE 219 203204 - 204241 904 345 aa, chain + ## HITS:1 COG:SPy1728 KEGG:ns NR:ns ## COG: SPy1728 COG4473 # Protein_GI_number: 15675578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted ABC-type exoprotein transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 5 345 4 344 344 231 42.0 2e-60 MIAKLFKERSKRFNARCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIIL GLLVLCLLLPFWGNIATYLEPADKHYLLVKEEEVIGHIKKVTGRAFRFWVIVQTLIFILV IPLFLALGLPVWGVILVAVAMAILKYFIFQKKAQPFYKQSGLNWTEAIEAENKRQQSILK FFSLFTNVKGITSSVKRRGYLDSILKRTKKDKKHTWYNLYLRAFLRSGDYFALSCRLFTL SLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPVGKDMQVSNLKRLI TQIVLILTMVQALCLFDLKFSLILVGVILVLSLVYLPAKLKKMID >gi|311100538|gb|AEKO01000007.1| GENE 220 204362 - 205090 752 242 aa, chain + ## HITS:1 COG:SPy1727 KEGG:ns NR:ns ## COG: SPy1727 COG0510 # Protein_GI_number: 15675577 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Streptococcus pyogenes M1 GAS # 2 241 23 262 263 371 74.0 1e-103 MGTYPNGDRVFVKMNTTPILAALAKEQIAPQLLWAKRLGNGDMMSAQEWLDGRILTKHDM NSKQIIQILGNLHRSKHLVNQLLQLDYHIENPFDLLHEWEENAAYQLRENSFLQDVVRDL KRHLPEFRAEIATIVHGDARHSNFVITTSGLIYLVDWDSVRLTDRMYDVAQILSHYIPLA HWPQWLSYYGYKNNDLVMDKIYWYGQFSYLTQISKFFDSRDMEHANREIYELRKFRETLH RY >gi|311100538|gb|AEKO01000007.1| GENE 221 205100 - 205741 734 213 aa, chain + ## HITS:1 COG:SPy1726 KEGG:ns NR:ns ## COG: SPy1726 COG0220 # Protein_GI_number: 15675576 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 211 1 211 211 372 84.0 1e-103 MRVRKRKGAEEHLANHPQYVILEPEAAKGKWHQLFGNDNPIHIEVGSGKGAFITGMAQQN PNINYIGIDIQLSVLSYALDKVLTSGAENVKLLRVDGSALTNYFADGEVDMMYLNFSDPW PKSRHEKRRLTYKTFLDTYKQILPKNGEIHFKTDNRGLFEYSLASFSQYGMILNKVWLDL HASDYEGNVMTEYERKFSEKGQVIYRVEAQFKD >gi|311100538|gb|AEKO01000007.1| GENE 222 205961 - 207142 1184 393 aa, chain - ## HITS:1 COG:SP0741 KEGG:ns NR:ns ## COG: SP0741 COG2081 # Protein_GI_number: 15900636 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Streptococcus pneumoniae TIGR4 # 1 387 1 386 391 618 80.0 1e-177 MKHFDTIVIGGGPAGMMATIASAFYGQQTLLIEKNKRLGKKLAGTGGGRCNVTNNGTLDD LLAGIPGNGRFLYSIFSQFDNHDIIAFFEDNGVKLKVEDHGRVFPKTDKSRTIIQALENK IQELGASILTNTEVVSVKKVDEHFQVKSADQIFTSDKLIVTTGGKSYPSTGSTGFGHDIA RHFKLHVTDLEAAESPLLTDFPHKALQGISLDDVTLSYGKHKITHDLLFTHFGLSGPAAL RLSSFVKGGEISHLDFLPNHSQENLKTYFEENREKSVKNALKSLVPERVAEFLAGDKADS KIKQLHPKDLEKLISQLKEMEIPITGKMSLAKSFVTKGGVDLKEINPKTLESKKVPHLHF AGEVLDINAHTGGFNITSALCTGWVAGIQSPWD >gi|311100538|gb|AEKO01000007.1| GENE 223 207255 - 208973 2345 572 aa, chain + ## HITS:1 COG:SP2126 KEGG:ns NR:ns ## COG: SP2126 COG0129 # Protein_GI_number: 15901940 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Streptococcus pneumoniae TIGR4 # 6 571 1 566 567 992 92.0 0 MEENIVSENNMKHRSSVYDSMVKSPNRAMLRATGMTDDSFEKPIVGVISTWAENTPCNIH LHGFGQIAKEGVKDAGAWPVQFGTITVADGIAMGTPGMRFSLTSRDIIADSIEAAMGGHN VDAFVAIGGCDKNMPGSMIAIANMDIPAIFAYGGTIAPGNLNGKDIDLVSVFEGIGKWNH GDMTAEEVKDLECNACPGPGGCGGMYTANTMATAIEVMGMSLPGSSSHPAESAEKKADIE EAGRAVVKMLELGLKPSDILTREAFEDAITVTMALGGSTNATLHLLAIAHAANVDLTLED FNDFQERVPHLADLKPSGQYVFQDLYNVGGVPAVMKYLLKNGFLHGDRITCTGKTVAENL EAFDDLTPGQKVIMPLENPKRADGPLIILKGNLAPEGAVAKVSGVKVRNITGPAKVFDSE EDAIEAVLSDEIVDGDVVVVRFVGPKGGPGMPEMLSLSSMIVGKGQGDKVALLTDGRFSG GTYGLVVGHIAPEAQVGGPIAYLRTGDMVTVDQDTKEITMHVSDEELAKRKAETELPPLY SRGVLGKYAHIVSSASRGAVTDFWNMDKSGKA >gi|311100538|gb|AEKO01000007.1| GENE 224 209131 - 209490 366 119 aa, chain - ## HITS:1 COG:SP2125 KEGG:ns NR:ns ## COG: SP2125 COG2151 # Protein_GI_number: 15901939 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Streptococcus pneumoniae TIGR4 # 5 116 2 113 113 148 59.0 2e-36 MKNFRDDIKVNDLAQPFLEPIVEQMTTVFDPEIDLDIYNLGLIYEITVDENGHCYFLMTF TDTGCGCEETMPYEIAEKLKSIDGINSVKVETTYSPVWKMTRISRYGRIALGISPRGGK >gi|311100538|gb|AEKO01000007.1| GENE 225 209994 - 210530 634 178 aa, chain + ## HITS:1 COG:no KEGG:str1602 NR:ns ## KEGG: str1602 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 178 1 178 178 199 94.0 4e-50 MSIEKTVSEIAEILGVSRQAVNNRVKQLPEEDLEKNAKGVTVVKRSGLIKLEEIYKKTIF DDEPIDEETKQRELLEILVDEKNSEIARLYAQLKAKDEQLSNMDDQLRVKDVQIAEKDKQ IDQQQQLTLTAMKDKEELKLELDEAKVEVDEAKAQVEEIQTKQEEASKKGFFGRLFGK >gi|311100538|gb|AEKO01000007.1| GENE 226 210580 - 211170 772 196 aa, chain + ## HITS:1 COG:SPy1864 KEGG:ns NR:ns ## COG: SPy1864 COG0847 # Protein_GI_number: 15675683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Streptococcus pyogenes M1 GAS # 1 190 14 204 208 265 72.0 4e-71 MENLETYIAFDLEFNTVDGVSHIIQVSAIKLNQHEEVDQFDSFVYSDVPLQSFINGLTGI TADKIAKAPKLESVLADFKSFVGDTPLIGYNALKSDLPILAENGLDLEEQYALDVSDEAF DRRASDLNGIVNLKLTSVADFFGIKGHGHNSLEDARMTAQIYEKFLELDENAKLLEQQEE VSNNPFAALGLGGLFD >gi|311100538|gb|AEKO01000007.1| GENE 227 211345 - 212073 466 242 aa, chain + ## HITS:1 COG:SPy1863 KEGG:ns NR:ns ## COG: SPy1863 COG0789 # Protein_GI_number: 15675682 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 241 1 241 245 242 53.0 5e-64 MSQFSTGELAKAAEVSVRTVQYYDQRGILTPSEVTEGGRRIYHESDLERLQVICFLRDLD FSIKQIKKLLQEENREQVLELLLTDQIESLEKSSKEIEVKLKRARHLQKATAKRHQLSLE DLSDISRLMENQKSWRYLQLRVYGSVVLTSLLYLIGLLIVIYYFKDPRGLFIICPAFLIA INLVVFHYRKQFEYLCPNCHRTFEPSSKEFALAGHTPRTRKLTCPHCHVKTYCLELAKSQ TK >gi|311100538|gb|AEKO01000007.1| GENE 228 212181 - 212441 283 86 aa, chain + ## HITS:1 COG:no KEGG:STER_1561 NR:ns ## KEGG: STER_1561 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 86 1 96 96 130 84.0 1e-29 MVKKAYSVETKLACIEMKKVAKSNKVIMDTLGIKNASQVKTWWRWYQNDELYCFHQPVGK QYTYGKGMKQLSEVEKYQSLVRESTK >gi|311100538|gb|AEKO01000007.1| GENE 229 212696 - 213019 207 107 aa, chain + ## HITS:1 COG:no KEGG:Spy49_1644c NR:ns ## KEGG: Spy49_1644c # Name: not_defined # Def: transposase # Organism: S.pyogenes_NZ131 # Pathway: not_defined # 1 76 33 110 192 103 67.0 1e-21 MKESGWLCRTRPKKVPNLGKTYHVTDNRLDRDFQADKPMEKLVTDITYLYFGNCRLYLSS IMLPKWRNLTKDNITDIVKNHIIFYNETRIQRKLNGQSPVEYRKLVA >gi|311100538|gb|AEKO01000007.1| GENE 230 213144 - 213443 423 99 aa, chain - ## HITS:1 COG:SP1102 KEGG:ns NR:ns ## COG: SP1102 COG0718 # Protein_GI_number: 15900969 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 4 99 1 96 96 111 79.0 3e-25 MMNMQNMMKQAQKLQKQMEKSQAELAATTFTGKSAQDLVVAELTGDKKVVNITFADAVVD PDDVETLQDMTVQALNDALGQIDEATKKSMGAFAGKLPF >gi|311100538|gb|AEKO01000007.1| GENE 231 213784 - 214293 386 169 aa, chain + ## HITS:1 COG:no KEGG:str1597 NR:ns ## KEGG: str1597 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 15 92 20 98 131 89 56.0 4e-17 MRKRNILGLFVGLIIGLYTVLGMSLFSFFNLKFNSVYYAQHIPHKEGTEPDVIMLMENMG WAYTPEIEGISYDDDGSYAITREKGTESSVLGFSDGTLVFYPDSGESYILNRNFSLQHAF DEHYHKIKYNQRKVQKEIRETVQPVIDAQSKPLINLQWLFNLIYQSRFN >gi|311100538|gb|AEKO01000007.1| GENE 232 214467 - 216806 2218 779 aa, chain + ## HITS:1 COG:SP1623 KEGG:ns NR:ns ## COG: SP1623 COG0474 # Protein_GI_number: 15901459 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 2 774 3 776 778 931 62.0 0 MKKQLQGLTQVEVKRRIDAGKTNHFKAKTGSSNWEIFRRNVFNSFNVLNFAIFVALIAVQ AWSNLFFFGIIVLNAFTGMMTELRARRMIDKLNLMNQDQIRVVRDGQLVSIDPKDIVLDD VMLLSAGEQVPSDAVVIDGMAELNEAMLTGESDHILKKDGKELLSGSYLVSGQVYAKVIN VAEDNYANKLMLEAKTHKPIVSRILYNMDKIAKFTGKIVIPFGLALFFEAYMIKQLSLQE SVVTSSTALLGMLPKGIALLTITSLLTAVIKLGMKHILVQEMYSVETLARVDVLCLDKTG TITQGKMTVKGLELLSERFTKEELERLLAAYMQHSKDKNATAQAIRNAYEGLEHHYQVGD VIPFSSDRKWGAVSVNGLGTLFLGAPEMLLKENPKAVDQAQARGSRVLILAWSQSGVDTE TMILPNDVEALTLLEISDPIREDAAETLEYLRSEDVTLKIISGDNPVTVSHIAHQAGFAD YQSYIDCSKVSDEELEALAEDTAIFGRVSPHQKKLLIQTLNANGHTTAMTGDGVNDILAL READCSIVMAEGDPATRQIANLVLMDSEFKDIPEILFEGRRVVNNIAHIAPIFLIKTVYS FLLGLICIASIVFGKAEYLLVFPFIQVQMTLAGQFIEGFPPFILTFERNIRPVEKHFLRR SLQLSIPNALMLVISVLIFHLSQVYLGMSNTDMLTLSYYMMGSTGVLAVIRACIPLNKGR VALIIYSVFGFLISSYYLRDVIAISTLNSYTLPIYLVAMAICTPLFFWISYKQGAFQKA >gi|311100538|gb|AEKO01000007.1| GENE 233 216900 - 217250 413 116 aa, chain + ## HITS:1 COG:no KEGG:str1595 NR:ns ## KEGG: str1595 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 116 1 116 116 215 93.0 5e-55 MKIVGHLTPKVIKAFDLDYNPGEDITLSAQRKKHMEKHRQEFSDFDATYERIPEIIAHPD YIGRHPNGQSLEYIKRIDGNVLVAVRLCDKLNVRTMFVIKDSKLKNYINAGRVKKM >gi|311100538|gb|AEKO01000007.1| GENE 234 217826 - 218029 169 67 aa, chain + ## HITS:1 COG:no KEGG:STER_1555 NR:ns ## KEGG: STER_1555 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ste00400]; Metabolic pathways [PATH:ste01100]; Biosynthesis of secondary metabolites [PATH:ste01110] # 7 61 1 55 93 67 72.0 1e-10 MKAWVFMDVLSNVRSVIDDIDRELIRLLAQRQRLVEKAGQLKPKGDKATVQASNRVAQVI ATVARRH >gi|311100538|gb|AEKO01000007.1| GENE 235 218201 - 219556 1802 451 aa, chain + ## HITS:1 COG:SP1817 KEGG:ns NR:ns ## COG: SP1817 COG0147 # Protein_GI_number: 15901646 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 450 453 671 72.0 0 MRKILPADTLTPILAYMRVQGEHKVILESIPREKENARFSIVAYNPVFEVTFKDGVLYEN GKAIDQDPFEYLDQVTVKGIKSDLPFAGGAIGFAGYDMIGLYENIGDIPEDTIGTPDMHF FIYESYLIFDHKKEKVYVVEDNIYSGRDNDAVRQALGQVVTSLQTQAPNEFTPQALQALQ FSNHIEKEVFMDMVAKAKKLIREGDMFQCVLSQRFSADFEGDPLDYYRNLRVTNPSNYLY FYDFGDYQVIGASPESLVSVKNGEVVTNPIAGTRPRGANEAEDAALADELSHDVKETAEH RMLVDLGRNDIGKIAQNGTVKVTKYMEVEYFRYVMHLTSVVKGQLLPELTALDALKSTLP AGTVSGAPKIRAMRRIYELEQEKRGIYAGAIGYLSATGDMDFAIAIRTMILKNQKAYVQA GAGVVYDSVPENEFYETINKAKAMTRIGDAQ >gi|311100538|gb|AEKO01000007.1| GENE 236 219553 - 220119 459 188 aa, chain + ## HITS:1 COG:SP1816 KEGG:ns NR:ns ## COG: SP1816 COG0512 # Protein_GI_number: 15901645 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 186 188 297 73.0 8e-81 MILLVDNYDSFTYNLAQYLGTFTEVKVLRNDDANLYEEAEKADGLVFSPGPGWPADAGKM EALIKDFAGKKPMMGICLGHQAIAETFGGKLGLAKNVMHGKQSNITFETPSPIFKDIDND VPIMRYHSIVVDQMPEGFDVTAITTDDQEIMAIQHKELPIYGLQYHPESIGSPDGLKMVE NFVKIVAG >gi|311100538|gb|AEKO01000007.1| GENE 237 220211 - 221215 1235 334 aa, chain + ## HITS:1 COG:SP1815 KEGG:ns NR:ns ## COG: SP1815 COG0547 # Protein_GI_number: 15901644 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 333 1 333 334 386 60.0 1e-107 MKEIFLQISNRQDLSQDQVQAVFDRILKNEVSESQIAAFLMGLKTKGETADEITGIVRAL KSHATVLPETFTDAMCNCGTGGDQSYSFNISTTVCFVLAAGGIRMAKAGNRSISSKSGSA DVLEALGINVAASPETLSKALDEVGLAFIFAQTMHPAMRFIGPARQALGIPTIMNLVGPL ANPLDLETQLMGLYRVELQEIVANAIQQLGRKRAVIITGPDNMDEAALYGTNTYTLLEDG HISQHTFTYEDLGMEKVELSDITGGDAKENAEILLSVLKNEASPYLETTVLNAGLGFFAN GKVATIKEGVELARQLIADGSALEKLRQLQEVQV >gi|311100538|gb|AEKO01000007.1| GENE 238 221212 - 221979 865 255 aa, chain + ## HITS:1 COG:SP1814 KEGG:ns NR:ns ## COG: SP1814 COG0134 # Protein_GI_number: 15901643 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 255 1 255 255 364 76.0 1e-101 MSKAFLPTILEQKEKEVAQLVMEDLQPLRQTYRLYEFLKSNQNKLQIISEVKKASPSMGD INLDVDIVAQAKTYEENGAAMISVLTDEVFFKGDISYLKEISSQVAIPTLAKDFIIDEKQ IVRSRNAGATVILLIVAALPEDRLKELYDFATSLGLEVLVETHNLPELEVAHRISAEIIG VNNRNLVTFETDINTSLELSTHFKDKPVYISESAIFTGQDAALVAPYFNGILVGTALMTA DNVAEKVKELQIDKG >gi|311100538|gb|AEKO01000007.1| GENE 239 221966 - 222547 471 193 aa, chain + ## HITS:1 COG:SP1813 KEGG:ns NR:ns ## COG: SP1813 COG0135 # Protein_GI_number: 15901642 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 192 1 192 199 213 60.0 1e-55 MTKVKICGLSTPEAVATAVEAGADYIGFVFAKSKRQVSLEQAHKLAKGVTGQTKIIGVFV APSLEELEEAISQVPLDIVQIHGTFDEALIPEISVPVIRAIQISDSDSQVKSQADYLLFD APIAGSGQTFDWQLLADKQIEQDYFIAGGLTVDNVAEAKETFHPYALDVSSGVETDGHKD LDKIKAFIERVKA >gi|311100538|gb|AEKO01000007.1| GENE 240 222544 - 223752 1449 402 aa, chain + ## HITS:1 COG:SP1812 KEGG:ns NR:ns ## COG: SP1812 COG0133 # Protein_GI_number: 15901641 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Streptococcus pneumoniae TIGR4 # 1 402 1 402 407 655 79.0 0 MTYQQPDAKGFYGKFGGQFVPETLMTAVIELDKAYREAKEDPSFQAELDDLLKNYVGRET PLYHAKRLTDHIGGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKKKIIAETGAGQHG VATATAAALFDMDCTIYMGEEDVKRQALNVFRMELLGAKVFSVTDGSRVLKDAVNAALRA WVAGIDDTHYIMGSALGPAPFPEIVRDFQSVIGREAKRQYAEISGGKLPDAVMACIGGGS NAIGMFYPFVNDESVAMYGAEASGLGLDTDKHAATFAKGRPGILHGALMDVLQDAHGQIM EAFSISAGLDYPGVGPEHCYFNEIGRATYDSITDEEALEGFKLLSRLEGIIPALESSHAI ALAQKVAAKMSPDQSLLVCLSGRGDKDVMQVKERFEAEAEGK >gi|311100538|gb|AEKO01000007.1| GENE 241 223756 - 224538 918 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148997862|ref|ZP_01825426.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP11-BS70] # 1 260 1 258 258 358 68 4e-97 MTKTLTKHLQAIKDSKHGIFVPYIMAGDHAKGLDGLFETIALLENSGVSAIEVGIPWSDP VADGPIIELAGQRSLAKGVTLTAIIKKLKEQKTQVPLVIMTYINPVYQYGIEAFVKDLAE TSVKGLIIPDLPNEHADFITPYLKDSDIALVPLVSLTTGLDRQKRLIDGAEGFIYAVAIN GVTGKTGNYRDDLDKHLSNLTAHADIPVLTGFGVSTEEDIKRFNAVSDGVIVGSKIVRDL HDGKEEEVAEFVTFGSHFEK >gi|311100538|gb|AEKO01000007.1| GENE 242 225244 - 226110 244 288 aa, chain + ## HITS:1 COG:CAC0861 KEGG:ns NR:ns ## COG: CAC0861 COG1131 # Protein_GI_number: 15894148 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 2 217 3 217 307 143 41.0 4e-34 MNTILRVCHLNKSFGKQEVLTDLNFEIQRGDIVGLIGKNGCGKTTLMKMILGLTPRTKGK IQFKGDSEYNTKRNSLNKIGFLLDCKLFEDFSAYDNLKLFSMYSSSFDKSELDKRINMLL KFVGLDSSKKLVKSYSFGMKQRLGLALALLDDPEFLILDEPFVGLDPAGVRVLLDYIVKL RREKRVTILISSHQLHEIEEICDYFLFINGKSIETHTKLGKNKIIITLEYAVPELEQSLS KLVTLKEGQIILPHDMMLLNSILKLIYKYNCEIKEITVSDSIEELFRG >gi|311100538|gb|AEKO01000007.1| GENE 243 226115 - 226867 197 250 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|297588156|ref|ZP_06946800.1| ## NR: gi|297588156|ref|ZP_06946800.1| conserved hypothetical protein [Finegoldia magna ATCC 53516] # 1 248 1 247 249 99 30.0 2e-19 MQSIVLAELYKLLKRKNFIILAILSLWSLIYGFGAFLHWDFVKIGAKLDLVTFITTMWTF LLILTIPLLLILYTSSFILGGEIQGGQILLEVNRVTSKKILIVSKYIVVILSILFLYILN CLTSLVTYICFISHTEFGYTRFWELHATNVQSIVVSLVNLGFIILLASIAFYLSLNISAI MASFASLGVYFLCQLLSNITMISKFIPGYFFVVLNYHFTIGLSLIHLLSYFLLCILLLIA TMKGFESKAF >gi|311100538|gb|AEKO01000007.1| GENE 244 226905 - 227633 349 242 aa, chain + ## HITS:1 COG:lin0801 KEGG:ns NR:ns ## COG: lin0801 COG3279 # Protein_GI_number: 16799875 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Listeria innocua # 3 232 4 232 240 116 28.0 3e-26 MYKVAICDDDSLQVSNLETHISEYFDEINVQYEIDGYYKGDRMVNTMSGQIDNYHLIFLD IEMEGLNGIETAKLLRNIDKNFILIYVTSYEQYALESFEVSPFRYLIKPVSIEKLREVLR DVLVELTAKQKFMFYQIGMEHFQISLDNIVCLYSEFGRKIHLELVSGSDTSFYGRISAIE KELPPTHFVRVNSGTMINLNHIASFNRNDVTMINGSCIAISRSRKKVVRTAYSHFIERSF GL >gi|311100538|gb|AEKO01000007.1| GENE 245 227807 - 228283 -84 158 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLDFKILSLLLTFLILFLFLSGDVMKKVFHYLFLIFWFLIQEDITILLLHQVQQTKEIVI FFAQFFLMLLTLLFVLGLKHFKIDNLFELNKIEYGILSLPPFLSIILLLYKIPLPLSRVL IFDSYLLLINIVIIVLYNYLSEKIIILSKAKLLLMKIA >gi|311100538|gb|AEKO01000007.1| GENE 246 228493 - 228882 280 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|297588149|ref|ZP_06946793.1| ## NR: gi|297588149|ref|ZP_06946793.1| hypothetical protein HMPREF0391_11216 [Finegoldia magna ATCC 53516] # 1 129 293 421 426 82 40.0 6e-15 MKKDGVQFHLDLQIPYNLDISSIAIDSCAILGNIIDNAIEEIERNGLTNPIEIVLRFKNN KLVFRVANPILTSEIDINYDGMKSMKLPNRRGLGIKSSYDRIMKLKGHLNINIQSNKFVV LVVIPLKIK >gi|311100538|gb|AEKO01000007.1| GENE 247 228988 - 230160 868 390 aa, chain + ## HITS:1 COG:no KEGG:STER_0939 NR:ns ## KEGG: STER_0939 # Name: not_defined # Def: major facilitator superfamily permease # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 9 350 11 350 390 172 40.0 2e-41 MFTNDSRIIFLNRFLSLIIEYGYAIALSIIFSKISVDYVLGLWIAKFLGEILANVGHQFV GKITNKKYVLIGIELLKAVCLALIYLAMGSVFVFALVVLTEVLTTYFNSLLSSAVPVLVK KVNLQKFNSTYTMIGSASYFLAPMIVGLWGSLDLGSLFLVYSVLTLLATLLLFKLGPIIF DRENESEEEISSSQGSPIFGKQSVILKMVMMTILLQSVGVLYDAYEVIFLTKDVGISSQA YSFSLSFLAIAFLATSSVLSFKSLTKFPPMTVYLLGSLVYLGYVVAFPFVPNLPTVLLSY IFLAVGQTISGISQNVYLQEKLNPLQLNNLYLKIEVLNQVLTGIVVFVSGMLIKRGLQVA TIYLGYSIPIIILVLGIMLMTKLYQKNPKA >gi|311100538|gb|AEKO01000007.1| GENE 248 230328 - 230759 426 143 aa, chain + ## HITS:1 COG:SPy1717 KEGG:ns NR:ns ## COG: SPy1717 COG3682 # Protein_GI_number: 15675568 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 137 1 139 144 132 51.0 2e-31 MLTISSAEWEVMRVLWAKGQATSSEIIAILAKKLDWSASTVKTLLGRLSDKGYLTSQRQG RGFIYQASLGEDEANLQALEAVFDQICLTKHSDLLGQLMAKTPMTQADVDKLQALLAAKE PVDQVVCDCVPGQCACRHHMEVN >gi|311100538|gb|AEKO01000007.1| GENE 249 230763 - 232991 2330 742 aa, chain + ## HITS:1 COG:SPy1715 KEGG:ns NR:ns ## COG: SPy1715 COG2217 # Protein_GI_number: 15675567 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 11 742 1 733 733 784 57.0 0 MAKETFVVNGMTCASCVANVENAVNKLDGVDKAVVNLTTEKMSVDYAGDKVSPEEIEKAV ADAGYEAEVYNPDTAKSQEEREEDKIHKVRERLIWSSVFTIPLFYLAMGPMVGLPVPNFL SPHHAALTYALVLLVLTAPVMWLGRSFYSNGFRTLAKGHPNMDALVALATSAAFLYSLYG TYHISLGHAHHAHQLYFESVAVILTLITLGKYFETLSKGRTSDAIKKLMHLSAKEATVLR DGKEVKLPVDKVVLGDHIVVKPGEKIAVDGQVISGSSAIDESMLTGESLPIEKSAGKPVF AGSINGQGSLIYEAEKIGKDTLLSQIIKLVEDAQQTKAPIAKIADQVSAVFVPVVMAIAL VSGLFWYFVMGQTFTFAMTVAVSVLVIACPCALGLATPTAIMVGTGLGAEHGILYKRGDV LELAHKADVLVFDKTGTITQGKPQLVSSYTYGNSGVALQLLASLEAKSEHPLGQAILVAA ENANLDLLEMDNFSSLTGRGLTASYAGKTYLAGNQTLMTEEKVDLTSAQADFQNLTADGQ TPIFLAEDGKLIGLFGVADQVKADSADMVAALHQMGKEVIMLTGDNDQTAQAIAQKVGIK RVISQVLPQEKSRVISDLQIEGKSVIMVGDGINDAPALATADIGIAMGSGTDIAMESADM VLMKPNLMDVVKALKISQVTITTIKENLFWAFIYNILSIPVAMGVLHLFGGPLLDPMIAG LAMSFSSVSVVLNALRLKRRKV >gi|311100538|gb|AEKO01000007.1| GENE 250 233065 - 233268 233 67 aa, chain + ## HITS:1 COG:SPy1714 KEGG:ns NR:ns ## COG: SPy1714 COG2608 # Protein_GI_number: 15675566 # Func_class: P Inorganic ion transport and metabolism # Function: Copper chaperone # Organism: Streptococcus pyogenes M1 GAS # 1 63 1 63 67 70 58.0 7e-13 MTKTYNITGMKCQGCVNTVTEKLSAVKGVDKVQVDLENKQVTIEGKPWKWSLKRALKGTK FELGDEI >gi|311100538|gb|AEKO01000007.1| GENE 251 233406 - 234452 1317 348 aa, chain + ## HITS:1 COG:SPy1421 KEGG:ns NR:ns ## COG: SPy1421 COG1181 # Protein_GI_number: 15675338 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 348 1 348 348 556 77.0 1e-158 MSKQTLILLYGGRSAEREVSVLSAESVMRAVDYSAFEVKTYFITQSGDFIKTQEFTETPS DDEKLMTNDTVVASQAIKPSDIYEEGAVVFPVLHGPMGEDGSIQGFLETLKLPYVGTNVL SSSVAMDKIMTKHILEVAGVPQVAYTVYIEGEDLEAAVAETLEKLTFPVFVKPANMGSSV GISKAENEAELHAAIDLALKYDSRILIEQGVVAREIEVGILGNTTVKTTDPGEVVKDVAF YDYQAKYIDNKITMDIPAHVPAEVMTQMRAYAAKAFRALGGCGLARCDFFLTEDGAIYLN ELNTMPGFTQWSMYPLLWENMGLSYSDLIKELVALGQEMFDKRESHLI >gi|311100538|gb|AEKO01000007.1| GENE 252 234776 - 235456 530 226 aa, chain + ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 21 218 1 198 206 296 86.0 2e-80 MDWSIVQQYLPFYQKAFFLTLHIAVLGIFGSFLLGLVVSVIRHYRVPVLSQLSTAYIELS RNTPLLIQLFFLYFGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVG LSIGLTPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLY YETDVALGMLVVAYLLMLLPISLVFSWIERRLRYAGFGLSGSSSGE >gi|311100538|gb|AEKO01000007.1| GENE 253 235416 - 236093 693 225 aa, chain + ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 225 1 225 225 341 86.0 7e-94 MQDSGFQVLLQGNNFLRILQGLGVTIGISIVSVLLSLLLGTLFGIVMTSKSKIVRLLSRI YLEFIRIMPQLVLLFIVYFGLARNFNINISGELSAIIVFTLWGTAEMGDLVRGSITSLPR HQFESGRSLGLTNGQLYTYVIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQ QIIDSNRLTIPTASFWIYGTILILYFAICYPVSKLSTYLENRWRN >gi|311100538|gb|AEKO01000007.1| GENE 254 236095 - 236853 307 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 229 1 225 311 122 30 3e-26 MTESILQIKDLKKSFGDNEILKGISLDVKQGEVVVILGSSGCGKSTLLRCINGLETIQGG DILLDGKSITGSKKDFHLIRQKIGMVFQSYDLFPHLDILQNLILGPVKAQGRNKEEVIAE AEKLLDRVGLLDKKHSYARQLSGGQKQRVAIVRSLLMHPEVILFDEVTASLDPEMVREVL ELINDLAQEGRTMLIVTHELQFARAIADRIIFMDKGVIAEEGTAEEFFNHPKTQRAQEFL NVFDFSQFGAYL >gi|311100538|gb|AEKO01000007.1| GENE 255 236896 - 237750 1020 284 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 5 283 2 279 279 271 52.0 1e-72 MKLTKKIFALLALVFALVAVTACSSNSSSGKSTAKARTIEEIKKSGELRIAVFADKKPFG YVDNKGAYQGYDIELGNRLAKDLGVKPKYVSVDAANRAEFLISNKVDITLANFTVTDERK KQVDFALPYMKVSIGVVSPKDKVIKDVKELEGKTLIVTKGTTAETYFEKNYPNIKLQKYD QYSDAYQALLDGRGDAFSTDNTEVLAWALENKGYEVGITSLGDPDTIAPAVQKGNKELLD FINKDIKKLGEENFFHKDYEKTLHPTYGDAANADDLVVEGGEVK >gi|311100538|gb|AEKO01000007.1| GENE 256 237846 - 238535 323 229 aa, chain - ## HITS:1 COG:no KEGG:stu1578 NR:ns ## KEGG: stu1578 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 180 1 180 180 255 76.0 8e-67 MRHQRKRKYADRKKLNRKYHSQKAYRKQQKRKTGWRARWDKFTYRLANIFGVCFLIILPI FIIYVIFFDHNVYKDSIYGLWQSESHQLAISYEGGYKSGKRNWEIVQDGNVLIKNARIDD IKRLEDGTLYIEVYAEERLLSNLPTKHGYNYLNMYVRKDHYLTYNDESYKRIDDEDKSIT WKDGSKSPYGQRKTLLDRLKPYIVFGMFGGLFIYVLFVEWKIKRNYKNK >gi|311100538|gb|AEKO01000007.1| GENE 257 238504 - 239214 200 236 aa, chain - ## HITS:1 COG:no KEGG:str1577 NR:ns ## KEGG: str1577 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 41 236 2 197 197 329 92.0 5e-89 MKGLGMTKKKLITLFKGKKNINSDCQSIVEPKGWRFNWRNVVLLEPTSGLIILLILALLY GGFYYYDHYTVNKDNIYGLWQSDHHQLAISYKHIRKRGNIDWQVVQDGKDIIYAARTRPV KRLNDGTLHMELSTVEGYLTDLPTKDGFSYMDFYLRKNNYLTYDGESYKRIDSGNRSITW KDGSTSPYGQRKTTIDEVLEAFYLILMGICSFLIVIEARQKRREKLSETPKKKKIR >gi|311100538|gb|AEKO01000007.1| GENE 258 239342 - 240715 1740 457 aa, chain + ## HITS:1 COG:SP1670 KEGG:ns NR:ns ## COG: SP1670 COG0770 # Protein_GI_number: 15901505 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 457 1 456 457 656 73.0 0 MKLTLHEIAKVVGAKNDVTAYEDVAINQIEFDSRKITEGDLFLPLKGARDGHDFIQTAFD NGALATFTEKELPADQAHILVDDALEAFQKLAAYYLEKTGVDVIAVTGSNGKTTTKDMIH DILATTYRTYKTQGNYNNEIGLPYTALHMPDDTEKIVLEMGQDHMGDIHLLSTLAKPKTA VVTLIGEAHLEFFGSRDKIAQGKMQMQDGMPDGSLLLVPSDPIVDPFLPSNLDVVRFGDG AELTVSELTEFKDHLTFSTNFLDGQVTLPVTGKYNATNAMVAAYVAKHLGVTEENILTAL ANLQLTKNRTEWKKAANGADILSDVYNANPTAMKLILETFSAIPKNEGGKKIAVLADMKE LGEQSVQLHTQMILSLTPDAIDTVIFYGEDIAELSQLASQMFPLGHVYYFKKIADEDQFD AMVKHIKESLGEHDQILLKGSNSMNLAKVVEELQAKN >gi|311100538|gb|AEKO01000007.1| GENE 259 240805 - 241251 347 148 aa, chain + ## HITS:1 COG:no KEGG:str1575 NR:ns ## KEGG: str1575 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 148 1 148 221 214 90.0 9e-55 MKDFLTTTQTHLPHVPLPYYLLMLLAMVLLSYLSWRWYKNKIWRWTFLTIQAIQLFALYT WYLWQGFPLYISLPLYHCRMAMFAVLLLKNSRIKSYFAIMGVVGTYCALIHPVFDPYEFP HITGFSFLIGHYALLVNSLNVIFNSYKT >gi|311100538|gb|AEKO01000007.1| GENE 260 241273 - 241470 157 65 aa, chain + ## HITS:1 COG:no KEGG:STER_1533 NR:ns ## KEGG: STER_1533 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 65 157 221 221 92 78.0 5e-18 MVATLILNLGLVIVNQTIGGNYGMLKHTPFIIGTPLFVKYFAVSGALIFLMIIMKKGLEH FEEKY >gi|311100538|gb|AEKO01000007.1| GENE 261 241732 - 243276 2030 514 aa, chain + ## HITS:1 COG:SP0439 KEGG:ns NR:ns ## COG: SP0439 COG4108 # Protein_GI_number: 15900357 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Streptococcus pneumoniae TIGR4 # 1 514 1 514 514 958 93.0 0 MSIQDEIKKRRTFAIISHPDAGKTTITEQLLYFGGEIREAGTVKGKKTGNFAKSDWMDIE KQRGISVTSSVMQFDYAGKRVNILDTPGHEDFSEDTYRTLMAVDAAVMVVDSAKGIEAQT KKLFEVVKHRGIPVFTFMNKLDRDGREPLDLLEELEEVLGIASYPMNWPIGMGKAFEGLY DLYNERLEPYKGDERFAKIEDGDTLFANNPFYEQAKEDIELLTEAGNEFSEEAILAGELT PVFFGSALTNFGVQTFLDTFLKFAPEPHGHKTVDGDEIDPLNKDFSGFVFKIQANMDPRH RDRIAFVRIVSGEFERGMSVNLTRTGKGAKLSNVTQFMAESRENVENAVAGDIIGVYDTG TYQVGDTLTVGKNKFEFEPLPTFTPELFMKVSAKNVMKQKSFHKGIEQLVQEGAIQLYTN YQTGEYMLGAVGQLQFEVFKHRMENEYNAEVVMTPMGKKTVRWIQPEDLDERMSSSRNIL AKDRFDQPVFLFENDFALRWFADKYPDVTLEEKM >gi|311100538|gb|AEKO01000007.1| GENE 262 243428 - 244003 550 191 aa, chain - ## HITS:1 COG:L116212 KEGG:ns NR:ns ## COG: L116212 COG3859 # Protein_GI_number: 15672299 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 2 187 13 186 191 97 37.0 1e-20 MSKTSIRPMIEVALFATIAYILDLVTQPMSLGPWISLSFKMVPIFLLSFRWGSKAGAMGG LIWGLLQVVTGQAAGGWLTLTQGFLEYFVAFSLIGISGIVKPALDKAIIQGKKLKSLTVI TEGILLGSFARYFIHFIAGVIFWGSYAPKGQSPYLYSFIVNSSSFLGETLASLIVFFALQ RFLGRLLNTEK >gi|311100538|gb|AEKO01000007.1| GENE 263 244308 - 244688 584 126 aa, chain + ## HITS:1 COG:no KEGG:str1570 NR:ns ## KEGG: str1570 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 126 1 126 126 229 96.0 2e-59 MGIFSGLLGNASKKDNGKVERQLENILIPGEQVELAYVLVRDLIVFTEKRLILVDKQGVT GKKTSYKSIPYHSISRFTVESSGHFDLDAELKIWISSALEPAEVLQFKSDNNVFEIQQAL AAAVLE >gi|311100538|gb|AEKO01000007.1| GENE 264 244701 - 245606 787 301 aa, chain + ## HITS:1 COG:SP1751 KEGG:ns NR:ns ## COG: SP1751 COG0598 # Protein_GI_number: 15901583 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 301 1 301 302 337 64.0 2e-92 MFIEKELSYKRHWINIDSDIISEQSYLYTKYDIDQETIEYALDKNERAHMDYNRETGTIT FIYNVLALEKDKEYYETIPLTFIVQDTRLVTISNEDNAYVISKMQDYVDNHEDLSIYKLL FAGLEMISNAYYPVIERLDQQKDEVSRRLRQTTTSKNLYDLSDLETGMVYLVAAATQNRL LLEHIKGHAIYRRLNEVEKEQFDDAMIEARQLVAMTDLISKVLQQLSGSYNNILNNNLNN NLSNLTIIEVLLGVLAVITGFFGMNVPLPFMTVSPAWIFIILGSVILCLVLARYLRWLVH K >gi|311100538|gb|AEKO01000007.1| GENE 265 245801 - 247390 2050 529 aa, chain + ## HITS:1 COG:SPy1415 KEGG:ns NR:ns ## COG: SPy1415 COG0513 # Protein_GI_number: 15675334 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Streptococcus pyogenes M1 GAS # 1 446 1 446 539 766 90.0 0 MKFTDLNLSEDIQSAVVAAGFEKPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL NKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVAPNEMGYLGIIENLTKK RMKGLKPPTAQEAFQAKKKVALKKIERDFADEAIRSNFDKFKGDAVKLAQEFTPEELALY ILSLTVQDPEMMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGNRGRDNSRRGGGYRGDRN RDDRDGGRRDFKRKSKKNSRDFENHGNKRPHRTSSEKKNGFVIRNKGDK >gi|311100538|gb|AEKO01000007.1| GENE 266 247607 - 248119 345 170 aa, chain + ## HITS:1 COG:no KEGG:str1597 NR:ns ## KEGG: str1597 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 17 127 20 129 131 170 79.0 2e-41 MTMKISKILGIFIGLFIGLVTVLGMSLFIFINLKFNSVYYAQHIPHKKGTEPDLVMLIEN MDWIYTPEIDGIRYDNDGTNAIINTKSKSFLTKSLGSFLYDKDNMTVGFDSTFRFEDVSY FSEEAKRVQVNESKIKREIREDFSPIMKVQTKPFINLQWLFNLIYQSRFN >gi|311100538|gb|AEKO01000007.1| GENE 267 248143 - 248652 361 169 aa, chain + ## HITS:1 COG:no KEGG:str1597 NR:ns ## KEGG: str1597 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 15 74 20 79 131 90 66.0 3e-17 MKISNILGIFVGLFIGLVTVLGMSLFIFINLKFNSVYYAQHIPHKDGTEPDVIMLMENMG WAYTPKIEGISYDDDGMYAITRDKGTETSILGLSGDTLYFSSASGDGYLLNRNFSLQDAF DEHYHKIKYNQRKVQKEIRETVQPVIDAQSKPLINLQWLFNLIYQSRFN >gi|311100538|gb|AEKO01000007.1| GENE 268 249033 - 249302 378 89 aa, chain - ## HITS:1 COG:SP1535 KEGG:ns NR:ns ## COG: SP1535 COG2827 # Protein_GI_number: 15901379 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Streptococcus pneumoniae TIGR4 # 5 89 2 86 99 103 65.0 6e-23 MAEKDSKAYMYVVECSDGTLYTGYTTDVGRRLKTHNSGKGAKYTRARLPVKLIYSEAFDS KSEAMSAEALFKKKSREKKLAYIKEHTEK >gi|311100538|gb|AEKO01000007.1| GENE 269 249306 - 250070 867 254 aa, chain - ## HITS:1 COG:SPy1411 KEGG:ns NR:ns ## COG: SPy1411 COG4123 # Protein_GI_number: 15675331 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 253 1 253 258 418 78.0 1e-117 MTNPILKDGERIDQLFSTDVKIIQNKEVFSYSIDSVLLSRFPKIPKKGLIVDLCSGNGAV GLFASTRTEAPITLVELQERLADMAQRSVTLNQLEDQVTVVNDDLKNLLDHTPRSQVDLI LCNPPYFKATETSKKNLSEHYLLARHEITTNLEEICQVARHALKSNGRIAMVHRPDRFLD IIDTMRQYNLAPKRIQFIYPKMGREANMLLIEAIKDGSTDGLKILPPLFVHKKNGDYTDE IFEIYFGKKTESES >gi|311100538|gb|AEKO01000007.1| GENE 270 250120 - 251055 833 311 aa, chain - ## HITS:1 COG:CAC0090 KEGG:ns NR:ns ## COG: CAC0090 COG0726 # Protein_GI_number: 15893386 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 107 311 88 293 293 140 38.0 2e-33 MKRSIEIIGKNRKALNLCLIIANLAVLAILGFVLSQRHNSKAEQPAQTEKTEQVANGANS SSEQAKKNDKKQLKKGSNHSIEASDYAYDVTAVNNTIRGVSQDVDDKVVFLTFDDGIDPT LTPQVMDILKEYGVHATFFHIGYTISQENADILKRQITEGHAIANHSLSHNFNLLYPGRV PNKSQIVSEVDQTNANFQAILGKDFKTRIFRYPGGHMSWQGLEATDHALANQGIQWIDWN MLCGDAEPASVRPTTSETMMAYMDGSQQYFPESHVKVVLMHDAAGKELTIQTLPQIIEYF KNQGYTFGVLE >gi|311100538|gb|AEKO01000007.1| GENE 271 251184 - 251939 832 251 aa, chain + ## HITS:1 COG:SPy1410 KEGG:ns NR:ns ## COG: SPy1410 COG0204 # Protein_GI_number: 15675330 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 245 27 271 272 386 74.0 1e-107 MFYAYLRGLVVFLLWIINGNAHYHNRDKLLNKDENYILVAPHRTWWDPVYMAFSARPKQF IFMAKKELFKNRIFGWWIRMCGAFPIDRENPGQEAIKYPVNMLKKSNRSLIMFPSGSRHS SDVKGGVAVIAKMAKVKIMPVVYQGPRELKGLLTGERVDMNYGNPIDISDLKRLNDENIQ EVARRIQSEFDRLDEEALSYQTGKKPNPLTYIYRIPLGLVAIIAVILTMAFSYVASFVWD PEKHRAKETQK >gi|311100538|gb|AEKO01000007.1| GENE 272 252139 - 252741 347 200 aa, chain + ## HITS:1 COG:SPy1409 KEGG:ns NR:ns ## COG: SPy1409 COG1555 # Protein_GI_number: 15675329 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Streptococcus pyogenes M1 GAS # 26 199 45 219 220 133 44.0 3e-31 MTCGAGNSMEAETSYTDVTTLSTSSSKEGSKSLTEVSSQSQTEGSEKVKSKVTVDVKGAV VKPGVYTLKVSARVTDAIQEAGGMTEDADAKSVNLAASLSDEEVIYVANKDENVSVLDQS DTGQVSNKGGQAVSKNGKINLNTATSEQLQTISGIGAKRAEDIVAYRESHGGFQSVGDLK NVSGIGDKTLDKIRESIYVA >gi|311100538|gb|AEKO01000007.1| GENE 273 252731 - 254971 885 746 aa, chain + ## HITS:1 COG:SPy1408_2 KEGG:ns NR:ns ## COG: SPy1408_2 COG2333 # Protein_GI_number: 15675328 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Streptococcus pyogenes M1 GAS # 448 746 1 299 299 356 56.0 9e-98 MWLKKSPINLFSLALLIVALYFTIFVSNFYAIGAFVFFMVCFLKHHWKNMAALKLVGLVG GFFLIYFLFLHHRAIMQDKQVPAEIHQVTLVADTLSVNGEQLSAIGKSNGQTYRVFYRLK SEKDQHFFKTTSQTLVLKGKIKLSSATGQRNFQGFDYQSYLASQSIYRIAQIERLDHIVT PKSISPIDFFHQLRRRALVHIQTHFPNPMRHYMTGLLFGYLDKEFDEQSQLYTSLGIIHL FALSGMQVGFFLGWFRYGLLRLGLPKNYILAILLPFSIFYSLMTGWTASVLRSLIQSLLA ECGIKKLNNMGITLLLLFLVLPHFLLTVGGVLSCSYAFLLCLFDFEEMPSFKKSIYMSLV LSLGTLPFLTYYYGTFQPLSLILTAIFSLVFDSFLLPILTVLFTLSGLVIFSQINPLFEW METFLTWIQYWIGQPLILGKPSLFQFGLMIVVLVLLFDFWKKPQFRISLLMIFSLLMIWV KHPLINEVTVVDVGQGDSIFLRSMKGKTILIDVGGKVTFGSKEKWQEGSQTSNAEKTLIP YLQARGVSQIDYLVLTHTDTDHIGDLEEVAKRFKIKEICVSQGALTKPSFAKRLRFLKRP VRTLKAGDKLPMMGSNLQVLYPNKIGDGGNNDSLVLYGKLLGTSFLFTGDLEKEGEEELM SSYPNLKVSVLKAGHHGSKGSSSEAFLDQLEPSLALVSAGENNRYKHPNDETLERFKERH IKVLRTDQDGAIRFKGWFKLSSETVR >gi|311100538|gb|AEKO01000007.1| GENE 274 255057 - 256319 1492 420 aa, chain + ## HITS:1 COG:SPy1358 KEGG:ns NR:ns ## COG: SPy1358 COG0766 # Protein_GI_number: 15675291 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Streptococcus pyogenes M1 GAS # 1 420 1 419 419 630 81.0 1e-180 MRKIIINGGKKLQGEVTVSGAKNSVVALIPAIILSDGVVTLDGVPAISDVDNLIEIIEVM GGSVKRDGETLEIDPRGVKDMPMPFGKINSLRASYYFYGSLLGRYGQATVGFPGGCDLGP RPIDLHLKAFEAMGASISYESESMRIATDAGQRIQGAHIYMDTVSVGATINTMLAAAKAD GRTVIENAAREPEIIDVATLLNNMGARVRGAGTEIITIDGVESLHGTRHQVIPDRIEAGS YIAMAAAIGKGIKIKNVLYEHLESFIAKLEAMGVRMIVEEDAIFVEEQGDLKPIDIKTSP YPGFATDLQQPMTPLLLKASGRGKIIDTIYEKRVNHVPELARMGADIQVLGGQIVYNGPT QLSGVPVKASDLRAGAALVTAGLMADGQTEITNIEFILRGYSNIIEKLSDLGADIRLIED >gi|311100538|gb|AEKO01000007.1| GENE 275 256385 - 256930 910 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116628248|ref|YP_820867.1| GNAT family acetyltransferase [Streptococcus thermophilus LMD-9] # 1 181 1 181 181 355 95 3e-96 MDIWTSLGAFAFFESERLSFRPLVFLDRFDLHEIVSNPENLQFFFPATKTQYETDCLLIH YFMKEPLGVWAIVDRESNKLIGIVRFEKIDVQKRTAEIGYFLNASYWGRGLMTETVTCLS DLALTAMGMERIILIAHLENEASIRVAEKSGFKLVSRFKGADRYTRTMRDYLRFEKEENC E >gi|311100538|gb|AEKO01000007.1| GENE 276 256923 - 258203 1022 426 aa, chain + ## HITS:1 COG:SPy1355 KEGG:ns NR:ns ## COG: SPy1355 COG4109 # Protein_GI_number: 15675288 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing CBS domains # Organism: Streptococcus pyogenes M1 GAS # 1 424 1 425 427 452 56.0 1e-127 MSKHQEILDYLEALPIGKRVSVRSISNHLQVSDGTAYRAIKEAENRGLVETRPRSGTVRI EKKVQVRLDKLTFAEIAEITESEVISGHEGLERVFSKFYIGAMTIENITRYLTKGDLLIV GDREDIQLLALEYNNAILVTGGFQVSDRVKELSRLKQFPVMVTTYDTFTVATMINQALSN VRIKTDIKTVAQVYTRREDYNYMTPEMTVKDFQNLVKRTNLVRFPIVSEDDRVIGIVTMR DVANQLPTTMAKAIMTKPTVTRLETSLATVAQKMIFEDYDMIPVVDDEKHYLGTITRRQV LEELQDNNRGDLHTFSDQMIANLNREKNAFSFEVEPAMIDNSGNLTQGVLVEMVKEVVYR TMENQEQNSLVIEEMMFYFLQAAQIDDKVTITPSIIAETRRRAHLDLMVTHGNHTVCKSV VVVKKT >gi|311100538|gb|AEKO01000007.1| GENE 277 258247 - 259107 1032 286 aa, chain + ## HITS:1 COG:SP1084 KEGG:ns NR:ns ## COG: SP1084 COG0024 # Protein_GI_number: 15900953 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 286 286 540 89.0 1e-153 MITLKSAREIEAMDRAGDFLASIHIGLRDLLKPGVDMWEVEEYVRRRCKEENVLPLQIGV EGSIMDYPYATCCGLNDEVAHAFPRHYILKDGDLLKVDMVLSEPIDKSVLDVSKLDFDNV AQVKKYTESYTGGLADSCWAYAIGTPSDEVKNLMEVTREAMYLGIEQAVVGNRIGDIGAA IQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGVAGRGLRLKEGMVLTIEPMINTGTW EIDTDLETGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY >gi|311100538|gb|AEKO01000007.1| GENE 278 259109 - 260068 634 319 aa, chain + ## HITS:1 COG:SPy1353 KEGG:ns NR:ns ## COG: SPy1353 COG1295 # Protein_GI_number: 15675286 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 9 317 9 317 321 349 57.0 4e-96 MKRQGIMARLLDKLQWRPLQLYLRHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYL NIDTTDLLKFMNEHLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKA INKVYGASEHRDVFISHIVGGFMSLVILFLLTFALMLSTIIQSVLRVITQTYPIGSKMTQ LILNSIQPLSIAVVFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIR TLSRLVDIKLFGSIMIFVFMLWFIFLARILILGAVFNATYQELKQGELHSRRGDVLTIIQ HFSGDGSDSKKQKNDEDKS >gi|311100538|gb|AEKO01000007.1| GENE 279 260159 - 260668 540 169 aa, chain + ## HITS:1 COG:SPy0749 KEGG:ns NR:ns ## COG: SPy0749 COG4708 # Protein_GI_number: 15674799 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 167 1 166 166 158 59.0 4e-39 MKKQTVRDLTHIAIVAALYVVLTIVPPFNLISYGPYQFRIAEMFNLLGFYNRKYIIAVTL GCVIANFFSFNMIDVVVGSLSTLVFVGSGVYFFDRFKNQDILGGLFDKAHVYFAFYFSFF MVTIAAELTLVTQAPFWATWFTVALGELASLLVGAVLIKKLAKVIDFVS >gi|311100538|gb|AEKO01000007.1| GENE 280 260719 - 262677 2293 652 aa, chain + ## HITS:1 COG:SP1117 KEGG:ns NR:ns ## COG: SP1117 COG0272 # Protein_GI_number: 15900984 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Streptococcus pneumoniae TIGR4 # 1 652 1 652 652 955 74.0 0 MEKRMKELVSKLNQYAKEYYTEDNPSVSDADYDKLYRELVDLEVEHPELVQADSPTHRVG GLVLDGFEKYQHEYPLYSLQDAFSREELDAFDKRVKDEFPNADYMAELKIDGLSISLTYV DGVLQVGATRGDGSVGENITENVKRISDIPLKLDQPLNITVRGECYLPRAEFERINIQRQ ENGEAEFANPRNAAAGTLRQLDTKVVAERRLATFLYQEASPTERLTQNDVLNEVAELGFS VNPRRIVTSSMDEIWDFIQAVGQDRDDLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIA YKFPAEEKEAELLSVDWQVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG DTVIVYKAGDIIPAVLRVVESKRTTQEPMEVPTQCPSCGSGLLHFEDEVALRCINPSCPA QIKEGLIHFASRDAMNIAGMGPSVVEKLFKAELVKDVADIYGLNSQDFLQLEGFKEKSAE KLYSAIQVSKENSAEKLLYGLGIRHVGAKVSKQLLEAFGSIQELASADVEAIAAVDGLGD VIAKSIQRYFAKEEAQVLMKELESYGVNLSYLGQKVADDAILSGKTVVLTGKLEHLKRSE AKAKLEALGAKVTGSVSKKTDLVVAGSDAGSKLEKAQSLGIEVKDEAWLLDL >gi|311100538|gb|AEKO01000007.1| GENE 281 262687 - 263700 1204 337 aa, chain + ## HITS:1 COG:SPy0752 KEGG:ns NR:ns ## COG: SPy0752 COG1597 # Protein_GI_number: 15674801 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Streptococcus pyogenes M1 GAS # 2 334 3 334 340 489 74.0 1e-138 MKQKRARLIYNPTSGQEIMKKNVAEVLDILEGAGFEASAFQTTPDENSAKNEATRAAKAG FDLVIAAGGDGTINEVVSGIAPLKKRPQMAVIPTGTTNDFARALKIPRGNPVEAAKVIAK NQTLQMDIGRAYDDKYFINIAAAGSFTELTYSVPSRLKTVLGYLAYLVKGAELLPQVKKV PVRITHDEGVFEGGLSMIFVALTNSVGGFETIAPDAKLDDGQFTLIMVKTANLFELVDLI RQVLQGGKHIYDKRISYIKTSSLDIEPLGEDRMMINLDGEYGGDAPIHLQNLKNHIEFYA NIDEISDDAITLPDTDDLALEAIAQKFSTEAEKIEND >gi|311100538|gb|AEKO01000007.1| GENE 282 263755 - 264105 175 116 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477140|ref|ZP_04061778.1| ## NR: gi|228477140|ref|ZP_04061778.1| hypothetical protein STRSA0001_0139 [Streptococcus salivarius SK126] # 23 111 1 89 341 147 79.0 3e-34 MTLSFVTIEKLGNCYIEYLEEWMFNKENEHYLSDVHLKNGDQAFESGFSNKGPEFEYAFQ EEKAEKRHSFLTLALPLILLSVSWGLVLLSWKYKPIIVYLAVIVVCFVLDIGIEAR >gi|311100538|gb|AEKO01000007.1| GENE 283 264215 - 264754 212 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477140|ref|ZP_04061778.1| ## NR: gi|228477140|ref|ZP_04061778.1| hypothetical protein STRSA0001_0139 [Streptococcus salivarius SK126] # 1 146 137 282 341 265 90.0 1e-69 MSQSDLDEDKTDSDDPKDYEDESAIYNWTEEDFENLKPKDDTLRSIIKSHGKGNYVEMES SGLKVRYDRGDGNEYIDLSFVKDEKGRFVYDGGIATYPLDGVTEVDNYSSNWTEEQINSL RTKDQDYLGPATSLSEVVREHYQEKGPGEVSTSIHQESYISQLILITLIRIVLLRKHNC >gi|311100538|gb|AEKO01000007.1| GENE 284 264909 - 265028 81 39 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477203|ref|ZP_04061841.1| ## NR: gi|228477203|ref|ZP_04061841.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 39 1 39 329 65 94.0 1e-09 MTASKTKRLLYLMSELEKENDISKTDYLARFGISERTLK >gi|311100538|gb|AEKO01000007.1| GENE 285 265074 - 265805 599 243 aa, chain + ## HITS:1 COG:no KEGG:SMU.1765c NR:ns ## KEGG: SMU.1765c # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 1 240 56 312 324 292 64.0 7e-78 MKVKYSRKNGSYHSQYEQGYGNLKYNQAVILSKILLESRALRKDEVAEIINIFVERAVDD KERRRIKRLTELELDSYQELKIYQNQDKSLLPAISAIFDAIVDQSPLSFSYRKSGEKVEE YKVFPISVIFDNHYFYCISYKLDDNFTCDYQFSEIRYFRVDHFQTIHKSENDLAFSMLFG NEWARITFEYKGLYRDVLESDIPKLKLLEESTSDGVDQVRYEIEIFSLLGFQKYIQRFEG GKI >gi|311100538|gb|AEKO01000007.1| GENE 286 265802 - 267265 1060 487 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477254|ref|ZP_04061892.1| ## NR: gi|228477254|ref|ZP_04061892.1| putative membrane protein [Streptococcus salivarius SK126] # 12 487 12 487 542 868 95.0 0 MKEKKKEMQKQVLTLLGILIFAFVNVFIFDNKMGAGFSAFSTITLMSIGLLSKRTSLRVL AIISYLINVVVAVFGFNYVGFLTAVQAIELIFVIWYLYPRDTFLRRDTTDKYTYRYRWIH LLLTVLISIGGYIVFAVVSSIWDGSFLEYGGNTALIFAMQYLLFLSITKSRQDEPTKVAH LFQKERRTKEMKAAIEAERQAKERALAQAFEVPLKAPSQTAAKFGNNIVKFASVWLLVMD MSILAYFFRPNDVGFGFGAFFVLLTIVLSLIFKSEEDKEDVFSIIYHKVRPIQPIFFILL LIAHAHKFSYGAAYALLFSAAYFFWAINKINMKTLLTFTVIIYFFPVFGYLSNPYRLGAE NLKMVGELVTDRNKSNTFYLGHYWSLLGLQSDGEYEGIPASWQAAKFADIQTFSDDSDIT SGVFQVNSHNDYDYDLHLTNNKGTIEVTTGSGKDKKELQFTEFARTYYRYEKLKKQITKS VIKIFTR >gi|311100538|gb|AEKO01000007.1| GENE 287 267469 - 267948 565 159 aa, chain - ## HITS:1 COG:no KEGG:STER_1509 NR:ns ## KEGG: STER_1509 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 159 1 159 159 228 95.0 7e-59 MKSKLNPTQKLVLSAIIMALYIAILFVSQAISFGAVQMRLATALYGLTYIFPFLVVPLSL ANAIANSFGGLGLIDVVGGFCASFLATGSIYLIRKIKLSSWFIILPILLIPSLVVPIWLS ALLKLPYVALVINLILGQIVPAILGAVLVRELTKRGYKD >gi|311100538|gb|AEKO01000007.1| GENE 288 268021 - 268848 1066 275 aa, chain - ## HITS:1 COG:SP1845 KEGG:ns NR:ns ## COG: SP1845 COG0708 # Protein_GI_number: 15901674 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Streptococcus pneumoniae TIGR4 # 1 275 1 275 275 479 86.0 1e-135 MKLISWNIDSLNAALTSDSARAQLSRAVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL EDYFPDYVNTWRSSVEPARKGYAGTMFLYKKELTPIITYPEIGAPSTMDCEGRIITLEFA NFFVTQVYTPNAGDGLKRLLERQIWDEKYADYLAKLDAQKPVLATGDYNVAHKEIDLANP SSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWRID YWLTSNRIADKVTKSDMINSGDRQDHTPIVLEIDL >gi|311100538|gb|AEKO01000007.1| GENE 289 268974 - 269306 173 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477208|ref|ZP_04061846.1| ## NR: gi|228477208|ref|ZP_04061846.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 86 1 86 110 96 68.0 4e-19 MKKQTRICYLFVVLFLLQVILTIKIWWSQGLVLPLIVFPGMSFFFLLYLRYLLGYNLNQF PSEPLFVLRRYGLGTSLNPRNPLGYKISLLMVMGVLIFLFCLNLFSLISH >gi|311100538|gb|AEKO01000007.1| GENE 290 269807 - 270019 175 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477242|ref|ZP_04061880.1| ## NR: gi|228477242|ref|ZP_04061880.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 28 70 208 250 250 77 86.0 3e-13 MLQMVIAVLSVPLFRFMRDGKCFCSPLFLYDKKDGTPFVPYSVTTNGGVYDVKETENADL KSGYADIVNN >gi|311100538|gb|AEKO01000007.1| GENE 291 270103 - 270981 844 292 aa, chain - ## HITS:1 COG:SP0977_2 KEGG:ns NR:ns ## COG: SP0977_2 COG0500 # Protein_GI_number: 15900854 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 96 292 1 194 194 258 63.0 8e-69 MTIDQQLVCYKRLPNWTATTLPEMVTQKHNTKVGTWAKLTILSGALHFYELDEGGQVTAE HLFTPETEIPFVQPQAWHRIAPASDDLECYLSFYCKPEDYMAKKYDTKAHSEVLEAVQSE HIKPGRTLDLGCGHGRNALYLASLGHDVTAVDVNNEATQRIQMIADEESYNVRAGYYDIN AAALPESETFDFILSTVVFMFLDPDQIPAIIKNMQERTVVGGYNLIVCAMDTEEHPCTMP FPFTFEEGELKNYYSDWELVKYNENLGHLHRLDEYGNPIALQFATILAKKVK >gi|311100538|gb|AEKO01000007.1| GENE 292 271409 - 271681 458 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821524|ref|YP_139966.1| 30S ribosomal protein S16 [Streptococcus thermophilus LMG 18311] # 1 90 1 90 90 181 100 9e-44 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVEENQVTLKEERVLEWL SKGAQPSDTVRNILSKEGVMKKFHESKFSK >gi|311100538|gb|AEKO01000007.1| GENE 293 271693 - 271941 346 82 aa, chain + ## HITS:1 COG:SPy0841 KEGG:ns NR:ns ## COG: SPy0841 COG1837 # Protein_GI_number: 15674876 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Streptococcus pyogenes M1 GAS # 1 79 1 79 79 108 81.0 2e-24 MDTIENLIIAIINPLITSPDQLTIKIIDGSEFLEYHLDLAPSDIGRVIGKKGRTIKAIRA IVYSVPTQGKKVRLVIDEKEKA >gi|311100538|gb|AEKO01000007.1| GENE 294 272107 - 273369 1122 420 aa, chain + ## HITS:1 COG:SPy1096 KEGG:ns NR:ns ## COG: SPy1096 COG0285 # Protein_GI_number: 15675079 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 412 1 412 425 498 57.0 1e-141 MIYQEALDWIHGQLKFGIKPGLERMAWMLEELGNPQDNLKAVHIVGTNGKGSTVNALQMI FSQAGYEVGTFTSPYIIDFKERISINGQMISEEDLLDLVNRVKPVVERLPKETNHENATE FEIITVLMFLYFGQVHPVDIAFIEAGMGGLHDSTNLFKPLAVLCPSIGLDHQAILGNTHA EIAAEKTGVLKNGAPFIYATDRTDVRDVFEKKAREEGSKTYELGRDFTATGSSHSFDFTY GEQRLDDIVLAMAGQHQVANASLAIMASLLLQKDYPKVTPELIKDALAHANWRGRTEFLR PNLMIDGAHNNESVKVLIDLLQSEYVDKEIELLFAAIDTKPIDGMLAQLKSVGDLTVTSF DYPNSVKLDQYPEVYKQVPDFKTWIKEHVTTDNKKLYVITGSLYFISQVRKWVLEQASDV >gi|311100538|gb|AEKO01000007.1| GENE 295 273436 - 275280 1983 614 aa, chain + ## HITS:1 COG:lin2235 KEGG:ns NR:ns ## COG: lin2235 COG0531 # Protein_GI_number: 16801300 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Listeria innocua # 1 614 1 607 607 614 52.0 1e-175 MFQRLKNILIGEPLTHDDNGDEHLLSKIQALAMLSSDALSSIAYGPEQVVLVLTAVSSAA IWWSIPIGLLVLVLLASLTISYRQVIKAYPQGGGAYMVTTENLSPKFGLIAGGSLLVDYM LTVAVSVASGADAITSALPFLHPFNLEISMILVLVLMVMNLRGMRESAKSLMIPVYLFII STLFLLGFGFFQILTGHMPYAATAHLGQPITGVSVILILRAFTSGSASLTGVEAISNAVP FFKKPKAKNAASTLFIMSSILGVMFAGITFLNWWIGITPHSGVTILAQMAREILGDSWIG SILFYIFQFSTAMILAVAANTGFSAFPMLSFNMAKNKYMPHMYLEKGARMGYSNGILTLA IGAITLLFIFRGNTERLIPLYTIGVFIPFALSQTGMVVHWIREYGKGFWKHSLANILGAL ICYAIVLILFLFRLGDIWPFFPIIAILMWMFLKIKKHYNGVAQQLRINGQVKEHHYQGNI VLILVGNVTKANIGAISYARSIGDKVIAMHVSTKDTENKDKETEQEFKKYFPEIEMVHIQ SPYSSITQSTIQYVDEVATQAEKDNATLTVMIPQFVPKKSWQTILHNQMSLRLKYYLKWR ENIVISSYSYHLKD >gi|311100538|gb|AEKO01000007.1| GENE 296 276540 - 277127 333 195 aa, chain - ## HITS:1 COG:CAC3606 KEGG:ns NR:ns ## COG: CAC3606 COG1309 # Protein_GI_number: 15896840 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 3 184 10 187 202 60 30.0 3e-09 MENTKEKILEVATNLFLTKGYEQTTISDIINGLDGLTKGAIYHHFESKEDIFEAVVKNIG LQNKLIFDKIKFSKNITGSEKITQLVSISLANTNMETIVTISPKLLDSPKLFVSFLKQMQ ELTIPDYFYPIIVEGVEDGSITTDDPQQLAELIAILLNIWLNPLIFENSKTTIVSKIDML NKCLENFNIKFDLNM >gi|311100538|gb|AEKO01000007.1| GENE 297 278166 - 279086 415 306 aa, chain + ## HITS:1 COG:mlr6164 KEGG:ns NR:ns ## COG: mlr6164 COG1131 # Protein_GI_number: 13475151 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Mesorhizobium loti # 11 213 47 249 340 137 35.0 3e-32 MKQETIVVRHLKKSYGQKNVTDDISITFYSSQIVAIVGHNGAGKSTFLNQINGTVASDKG TIHIKGVDVTKQPGKARELVSSMPQFQVPIKGVTVQEAIKCIGAVKGMNSSAVESRTKEL IDFLEINQWKHTAGEKLSGGLQRLTSFAMSVVDIPSILVLDEPTNDVDPFRRTLIWRYLR SLANLGTTVIIVSHNLFEVERYADRYLLFDKGRIKRDVLVSESKNARQLKHQVSLSGVNK EELFHFLNHNNLKYDDVEKRLIFTVSEDCFTEVISVIFDLLKTDRIVSYEIKLRTLSDDY EEYINE >gi|311100538|gb|AEKO01000007.1| GENE 298 279079 - 279822 275 247 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3040 NR:ns ## KEGG: EUBREC_3040 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: ABC transporters [PATH:ere02010] # 2 247 9 254 254 187 44.0 3e-46 MNNSQKRLSKFGGLVKWSLLRHRFYIPVFVVVQIILSFAVIYGFLFITNSTNQAEKSYLC TGAMAINVIAVTCVLAPQIVSEAKQNGVYEYQKTLPVSRVEILLSDLLIWGLLCLPGILS SILISKFGFGLDVSIGINSILSVLLIIFSLLLVGFAIAYILPTNVVPLVTQLIMIGGLMF SPIIYAADRLPSWTITLYKYFPFVPASQIIRSSIFRLEYVDSKNFSTLIVWACFGFFVSL ITLSRRK >gi|311100538|gb|AEKO01000007.1| GENE 299 279825 - 280040 141 71 aa, chain + ## HITS:1 COG:PM0425 KEGG:ns NR:ns ## COG: PM0425 COG0488 # Protein_GI_number: 15602290 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Pasteurella multocida # 4 66 325 388 556 58 45.0 2e-09 MSKLTVSNLTKVVKNKTLLNNVCLSLNYGQVYSVIGDNGAGKTTLFRCILGLSQPIGTVA LDDKVVNSFNL >gi|311100538|gb|AEKO01000007.1| GENE 300 280051 - 280542 166 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 1 144 82 229 309 68 32 2e-13 KKVGVVFPFPDSFGAYTVKEVFENHTRYYACQSVDVESYLKKFGLNVYLGDMICKFSLGM KQRLNIALACLHNPDILILDEPFNGLDRDGILFLQHLLLDFKKQEKLIIISSHSFAELEK ITDRLIFIQQGEILVDTDVLEIKRQGFETFEQFYRKIKEEYGV >gi|311100538|gb|AEKO01000007.1| GENE 301 280598 - 280846 89 82 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDKYISQLISFDFFSFVGHFESSDQNSILTDSAGIMTLASTLTVSVAAIYGVVILNRLLL KDYIGNAREIIFYFQAVDLRYS >gi|311100538|gb|AEKO01000007.1| GENE 302 280995 - 281267 140 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFAGFFVLIVVLTSILVGQVTQSINVPIIVSIIIVSIMGNFVAYLYQLNNLIIVLLTLCV AVLVCLAISILIDRVKKDDLIKNTPIKNGK >gi|311100538|gb|AEKO01000007.1| GENE 303 281372 - 281638 230 88 aa, chain - ## HITS:1 COG:L24515 KEGG:ns NR:ns ## COG: L24515 COG3328 # Protein_GI_number: 15673186 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 1 88 304 391 391 171 96.0 4e-43 MESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKKIKRQTKKKVLFPNEEAMERYLVTL FEDYNFKQSQRIHKGFGQCSDTLESLFD >gi|311100538|gb|AEKO01000007.1| GENE 304 282227 - 282790 739 187 aa, chain + ## HITS:1 COG:SPy1097 KEGG:ns NR:ns ## COG: SPy1097 COG0302 # Protein_GI_number: 15675080 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Streptococcus pyogenes M1 GAS # 3 184 16 197 200 284 78.0 5e-77 MANQEKVEQAVYQLLEALGENPEREGLLDTPKRVAKMYAEMFSGLNEDPKDQFTAVFSEV HDEVVLVKDIPFYSMCEHHLVPFYGKAHVAYLPSGDKVTGLSKLARAVEVAARRPQLQER LTDQVATALEEALNPRGVFVMVEAEHMCMTMRGIKKPGSKTITTVAKGLYKEDREERKEI LSLMRDF >gi|311100538|gb|AEKO01000007.1| GENE 305 282799 - 283599 950 266 aa, chain + ## HITS:1 COG:SPy1098 KEGG:ns NR:ns ## COG: SPy1098 COG0294 # Protein_GI_number: 15675081 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 266 1 266 266 379 71.0 1e-105 MFIGKHEIAGKACIMGILNVTPDSFSDGGDFVTIEDALAQAERMIAQGASIIDVGGESTR PGAEFVTEEEEIARIVPIIQAIKAKYDVLISIDTYKTATARAALEAGADILNDVWAGLYD GQILALAAEKNVPIILMHNQKEEKYSDVTENVCTFLSQRTQAALEAGVAKENIWIDPGFG FAKNVQHNIDLLRGLDKVVGLGYPVLFGISRKRVVDYLLGGNIPAKDRDQGTAALSAYAV GKGCQIVRVHNVEVNRDIVKTISGIL >gi|311100538|gb|AEKO01000007.1| GENE 306 283630 - 285081 1421 483 aa, chain - ## HITS:1 COG:SP1382 KEGG:ns NR:ns ## COG: SP1382 COG0366 # Protein_GI_number: 15901236 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 1 481 1 481 484 725 74.0 0 MTNQTAMQYFEWYLPSDGQHWNNLADDAQHLADLGISHVWMPPAFKATNKDDVGYGVYDL FDLGEFNQKGTIRTKYGLKEEYLNAINQLKNVGIVPMADVVLNHKAAADKLETFDVVEVD PEDRTQEISEPFEIEGWTHFTFDGRQKAYNDFEWHWYHFNGTDFDAKRNKNGIYLIQGDN KGWAHNDLVDNENGNFDYLMYANLDYKHPEVIENIYEWADWFVETTGVQGFRMDAIKHID SFFMRNFIRDVKEKQGQDFYVFGEFWNAKEEDNNTYLEKTENRFDLVDVRLHNNLYYASL EGAEYDLTTIFDHSLVKNHPEHAVTFVDNHDTQRGQALESTVEEWFKPSAYALILLRKDG LPCLFYGDYYGIDGEFAQESFKDVLDTLLYARKDLAYGEQTDYFDDPNCIGWTRSGNENG TPLAVTISNDAANNKSMEIGSDWAGQTFYDILGNCSDTVIIDEDGWGDFPVSEKSVSVWT IQD >gi|311100538|gb|AEKO01000007.1| GENE 307 285301 - 285660 276 119 aa, chain + ## HITS:1 COG:SPy1099 KEGG:ns NR:ns ## COG: SPy1099 COG1539 # Protein_GI_number: 15675082 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Streptococcus pyogenes M1 GAS # 1 119 1 119 119 184 74.0 3e-47 MDKIILNGCRFYGYHGAFAEEQTLGQIFVVDLELEVDLTRASQSDNLADTVHYGLVFEAV QKQVEEEKYILIERLAGAICEDLFNQFAPIQSIKIRITKENPPINGHYRSVGIELERSR >gi|311100538|gb|AEKO01000007.1| GENE 308 285657 - 286148 264 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 3 143 121 260 278 106 39 3e-35 MTKVYLSLGSNIGNRQGYLQKAVDSLNRLPETEVKAVSSYYETAAWGLTDQADFLNLALA LDTQLPAETLLSYCQQIEKNLDRVRHEHWGPRTVDIDILLYGQETWGTEHLKVPHPFMTQ RAFVLVPLLEIAEDLVEPQTGQPYEKYLSQLDTSDVRKLEQVD >gi|311100538|gb|AEKO01000007.1| GENE 309 286338 - 287240 1245 300 aa, chain + ## HITS:1 COG:SPy1101 KEGG:ns NR:ns ## COG: SPy1101 COG0812 # Protein_GI_number: 15675084 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Streptococcus pyogenes M1 GAS # 8 299 4 295 295 477 79.0 1e-134 MLDELKEDLVGIDIRFDEPLKGYTYTKVGGPADYLAFPRNRYELSRIVKFANKHDIPWMV LGNASNLIVRDGGIRGFVIMFDKLNGIAVNGYQVEAEAGANLIATTKVARFQSLTGFEFA AGIPGSIGGAVFMNAGAYGGEIAHILVSAQVLTKDGEIRTIDARDMRFGYRRSVLQETGE VVISAKFNLKPGDYEQIKNEMNRLNHLRELKQPLEYPSCGSVFKRPLGHFAGQLIMEANL KGHRIGGVEVSTKHAGFMVNVDQGTAKDYEDLIADVIAKVKENSGVTLEPEVRIIGDKLN >gi|311100538|gb|AEKO01000007.1| GENE 310 287285 - 288439 1163 384 aa, chain + ## HITS:1 COG:SPy1102 KEGG:ns NR:ns ## COG: SPy1102 COG3842 # Protein_GI_number: 15675085 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Streptococcus pyogenes M1 GAS # 1 383 1 383 384 660 89.0 0 MTNPIIAFQNVSKVFEDSGTQVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLDAT SGDVLLDGKRINDIPINKRDVHTVFQSYALFPHMNVFDNVAFALKLKKVPKKEIEERVKE ALKMVQLDGYQKRSIQKLSGGQRQRVAIARAIINQPRVVLLDEPLSALDLKLRTEMQYEL RELQQRLGITFVFVTHDQEEALAMSDWIFVMNDGEIVQSGTPVDIYDEPINHFVATFIGE SNILPGVMIEDYLVEFNGKRFESVDGGMRPNEPVEVVIRPEDLQITLPEEGKLQVRVETQ LFRGVHYEIIAYDNLGNEWMIHSTRKAIEGEIIGLDFTPEDIHIMRLNETEEEFDARIEE YVEVEEHEDGLINAIEEERYEENS >gi|311100538|gb|AEKO01000007.1| GENE 311 288423 - 289217 733 264 aa, chain + ## HITS:1 COG:SPy1103 KEGG:ns NR:ns ## COG: SPy1103 COG1176 # Protein_GI_number: 15675086 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Streptococcus pyogenes M1 GAS # 1 264 1 264 264 389 82.0 1e-108 MKKTASLFSVPYLLWLLLFVVAPVLMLLYQSFFDISGNFTLDNYGTFFSSWTYLRMSFNS VLYAAIITLVTLFISYPTAYLLTRLKHKQLWLMLVILPTWVNLLLKAYAFMGIFGQQGGI NAFLGFFGIAPMQILFTDFSFIFVASYIEIPFMILPIFNALDDLDENIVNASKDLGANDW QTFTKVIFPLSLNGVRSGVQSVFIPSLSLFMLTRLIGGNRVITLGTAIEQHFLTTQNWGM GATIGVVLIAAMIATMWLTKERHQ >gi|311100538|gb|AEKO01000007.1| GENE 312 289214 - 289993 631 259 aa, chain + ## HITS:1 COG:SP1387 KEGG:ns NR:ns ## COG: SP1387 COG1177 # Protein_GI_number: 15901241 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Streptococcus pneumoniae TIGR4 # 1 256 1 256 257 341 77.0 1e-93 MKKFANLYLAFVFVILYLPIFYLIAYSFNSGSDMNSFTGFTLDNYQSMFSDSRLMLILVQ TFFLAFLSALLATIIGTFGSIFIYEIKQKQQTGILSLNNVLMVAPDVMIGASFLILFTLI GFQLGFVSVLLSHIAFSIPIVVLMVLPRLKEMNRDMVHAAYDLGATQWQMLREVMLPYLT PGIIAGYFMAFTYSLDDFAVTFFVTGNGFSTLAVEIYSRARKGISLEINALSTVVFLFSI LLVIGYYMITQERKEKHDA >gi|311100538|gb|AEKO01000007.1| GENE 313 289986 - 291053 1104 355 aa, chain + ## HITS:1 COG:SPy1105 KEGG:ns NR:ns ## COG: SPy1105 COG0687 # Protein_GI_number: 15675088 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Streptococcus pyogenes M1 GAS # 1 355 1 357 357 543 74.0 1e-154 MRKLYQFLAGILAIIFFLWGISAYMQSRTGNASDKLVIYNWGDYIDPDLLTKFTKETGIK VQYETFDSNEAMYTKIKQGGTTYDIAVPSDYTIDKMVKEDLLVKLDKSKIHGFDQIGSSF KGLSFDPHNDYSIPYFWGTVGIVYNTKLVKKAPQHWNDLWSPEYRNQIMLVDGAREVIGL SLNSLGYSLNTKNMTELRLAETKLNSLTPNIKAIVGDEMKGYMIQGDAAIGVTFSGEASE MLDKNEDLRYVVPSEGSNLWFDNLVIPKTVKHEKEAYAFINFMLKPENAAQNAEYIGYAT PNEAAKALLPKSITDDKAFYPSESTIKNLEVYNNLGQKWLGIYNDIYLQVKMYRK >gi|311100538|gb|AEKO01000007.1| GENE 314 291198 - 292454 518 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 481 62.0 1e-135 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLRLKKRRFQCKSCRRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGKLAFVAQNYETNELIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAKIVLDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100538|gb|AEKO01000007.1| GENE 315 292665 - 293564 1269 299 aa, chain + ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 1 294 1 294 296 461 88.0 1e-129 MQAAFLFLLISFLIILGILISMLYVVRQQSVAIVERFGRYQKIATSGIHMRLPFGIDKIA ARIQLRLLQSEIVVETKTKDNVFVMMNVATQYRVNEQNVTDAYYKLMRPEAQIKSYIEDA LRSSVPKLTLDELFEKKDEIALEVQHQVAEEMTTYGYIIVKTLITKVEPDAEVKQSMNEI NAAQRKRVAAQELAEADKIKIVTAAEAEAEKDRLHGVGIAQQRKAIVDGLAESIAELKEA NVGMSEEQIMSILLTNQYLDTLNTFAAKGNQTLFLPNNPNGVDDIRTQILSALKADNKN >gi|311100538|gb|AEKO01000007.1| GENE 316 293768 - 294232 428 154 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 149 5 147 157 189 60.0 2e-48 MAQKAHSLSHTKWMCKYHIVFTPKYRRKIIYNQYRSSLGEIFHRLCQYKGVEIIEGHLMP DHVHMLVSIPPRMSVASFMGYLKGKSALMMFDKHANLKYKFWNRHFWAEGYYVSTVGLNE ATIKKYIQEQEKHDIALDKLSVKEYENPFRDNGK >gi|311100538|gb|AEKO01000007.1| GENE 317 294368 - 294766 422 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 2 124 3 124 126 167 62 1e-39 MTKFLHTCVRVKDLEASLKFYKEALGFKEARRNDFPEYKFTLVYLQLEDDPDYELELTYN YDHEAYDLGDGYGHIAVGVDDLEATHQAHKEAGYTVTDLSGLPGKPKMYYFITDPDGYKI EVIRLTQFLEKS >gi|311100538|gb|AEKO01000007.1| GENE 318 294882 - 295775 923 297 aa, chain + ## HITS:1 COG:SPy1596 KEGG:ns NR:ns ## COG: SPy1596 COG1940 # Protein_GI_number: 15675481 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Streptococcus pyogenes M1 GAS # 1 291 16 297 307 154 33.0 1e-37 MTILAIDFGGTQVKSALVSEQFTIEKSLPTQSSPQTLEQATDMIDQIVTSVEAALSGIAI SVPGTVDTEEGVIYHGGLLRFFHGFRVKAALQAKYHLPVAALNDGKAVALAELATGHLQG VTNGAALVLGSGLGGGFIINSKLFQGSHFQAGELTILLPVQMEKVDSSLMRGMTLSAVGL ITKVNEVLGDSDLKDGLAAFKAINAGDKTVYPLFESYCRNLAITILNLQTIFDMETFVIG GGISAQPILIEEVNRQFDKVHHEIDFIGKIIKRPKIVACHHHNGANLIGAAYFLKQG >gi|311100538|gb|AEKO01000007.1| GENE 319 295929 - 297023 1204 364 aa, chain + ## HITS:1 COG:L0083 KEGG:ns NR:ns ## COG: L0083 COG1932 # Protein_GI_number: 15672585 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Lactococcus lactis # 3 360 2 361 365 433 59.0 1e-121 MTIYNFSAGPATLPKPVLEKAQAELLNYQDSGMSVLEMSHRSPEFDKIVKDAEATLRELM VIPDNYKVIFLQGGASTQFTMVPLNLAQGKKAYYLVGGSWGKKAYTEAVKLSKTIPFEPI LLASSEDTVYDHIPSFDPSTIDPEAAYVHLTTNNTIEGTSIYDLPDTNGVPIVADMSSNI LAARYNVEDFALIYAGAQKNIGPAGVTVVIVREDFLNDQPQLSAMLDYRIQAEAGSLYNT PPCFNIYISKLVFDWVKNEIGGVDKMAEIQREKSGLLYDYIESSDFYTNPVKYEKDRSVC NIPFVTPSKELDTKFVAEADALGFKNIKGHRSVGGMRASVYNAFPRQGVLDLIDFMKKFE AENK >gi|311100538|gb|AEKO01000007.1| GENE 320 297036 - 297593 381 185 aa, chain + ## HITS:1 COG:SP1464 KEGG:ns NR:ns ## COG: SP1464 COG0454 # Protein_GI_number: 15901314 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 165 1 163 164 192 56.0 4e-49 MEIRQAFPNEIGAIITVIESARTALAEAGSSQWQGADGYPTEETIFDDVLKGQAYVGIID GQIVSYAAVVTDGDPAYDKIYDGDWKHHNKRYITFHRIAVLTEVTGQRVAQTFIQGLIEG TDAHDFRCDTHEKNLVMQHILEKLGYVYCGKVPIDGERLAYQKIKTKREKAFYQEVDEAT HHGIH >gi|311100538|gb|AEKO01000007.1| GENE 321 297612 - 298790 1677 392 aa, chain + ## HITS:1 COG:L0084 KEGG:ns NR:ns ## COG: L0084 COG0111 # Protein_GI_number: 15672586 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Lactococcus lactis # 1 392 1 395 398 434 55.0 1e-121 MVFSVKTYNNINQIGLKELGNHFQIDGDLAENPDAYIIRSQNLHDTVFPENLKAIARAGA GTNNIPVDEATEKGIVVFNTPGANANAVKEAVLTSILLSARDYIAANAWVNKLSGDDVPK QIEAGKKQFAGSEIAGKTLGVIGLGAIGARIANDAYRLGMKVYGYDPYVSIEAAWNISHH VKRVSDLKEIFENCDYITVHVPLTPDTKGTFNADAFSLMQKGTTIINFARAELVENDALF DALETGVVKRYITDFGTEELLNKPNVTVFPHVGGSTGEAELNCAIMAGQTIRRFMETGEI VNSVNFPRVQQVLSAPYRITLINKNVPNIVARISTAVSDFNINIDNIINRSKGEYAYTLL DLDETDKSKIDELVAKFEASDNIVRVRLIKGK >gi|311100538|gb|AEKO01000007.1| GENE 322 298849 - 299343 453 164 aa, chain + ## HITS:1 COG:SP1463 KEGG:ns NR:ns ## COG: SP1463 COG0350 # Protein_GI_number: 15901313 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 2 161 5 165 176 145 49.0 5e-35 MYHRQYYVSPIGRLSLVAGEEVLYGIWLKGQNHFQSGFKEEELVDTSNPILEVTKKWLQA YFKGENPSPDDLPLAERGTAFQQRVWLALSEIPMGQIRTYGQIGKAISCQSAQAVGTAVS KNPWLILVPCHRVLPSSGHLGNYAAGEYAKRFLLRLEGLRFDKP >gi|311100538|gb|AEKO01000007.1| GENE 323 299378 - 299731 331 117 aa, chain + ## HITS:1 COG:SP1462 KEGG:ns NR:ns ## COG: SP1462 COG1393 # Protein_GI_number: 15901312 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pneumoniae TIGR4 # 1 117 1 117 118 139 59.0 1e-33 MYTFYEYPKCSTCRKAKAELNQLGLDFESINIKENPPSAQFLKELLAGADLELKKFFNTS GQSYRSLGLKDKLPTLSLDEAVELLASDGMLIKRPILIKDGKVLQIGYRTPYQDLNL >gi|311100538|gb|AEKO01000007.1| GENE 324 300196 - 300384 245 62 aa, chain + ## HITS:1 COG:no KEGG:STER_1483 NR:ns ## KEGG: STER_1483 # Name: not_defined # Def: putative effector of murein hydrolase LrgA # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 62 63 124 124 82 98.0 6e-15 MTILFLPAGVGIMERWNAISANIVPIILIIMGALVLNIVVIAVVVVFIKKHFEGDYEEVN RG >gi|311100538|gb|AEKO01000007.1| GENE 325 300362 - 301072 845 236 aa, chain + ## HITS:1 COG:L171802 KEGG:ns NR:ns ## COG: L171802 COG1346 # Protein_GI_number: 15672743 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Lactococcus lactis # 13 235 8 230 232 205 56.0 5e-53 MRRLIVANFFNTPLFGLTLSVLAYTIGLLIYRRFPNPLTTPLLVSTALIIVILHYTGISY KDYYVGGSYLNSLIIPSTVALAVPFYKNLHLMRHHYKSILIGSTVACVLNTTYTALIAKL FGMDYFLAISLFPKSVTTAMAVGISEKMQGITTVTLVVVVITGILTSVLGPVFLKMIGIK DPVAIGLSLGGTGHAVGTGTAFRYGQVAGAMGGLSIAVTGILYVFISPIVASLILR >gi|311100538|gb|AEKO01000007.1| GENE 326 301158 - 301718 640 186 aa, chain + ## HITS:1 COG:SPy0726 KEGG:ns NR:ns ## COG: SPy0726 COG0546 # Protein_GI_number: 15674781 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Streptococcus pyogenes M1 GAS # 1 186 1 186 186 216 58.0 2e-56 MNYGDYIWDLGGTLLDNYQVSSQAFLATLEQFERTAEFQAVYDALKVSTSTAIAMFAPDI TDFRTLYKQEEAKHLQEPVLFEGAKDVLAKIVAEGGRNFLVSHRNYLVLDILDRAEIAHY FTEVVTSENGFARKPSPDSFLYLIKKYDIKHGLVIGDRQIDIEAGGAAGLDTLFVDGHKS LLEIVT >gi|311100538|gb|AEKO01000007.1| GENE 327 301719 - 303671 2240 650 aa, chain + ## HITS:1 COG:SPy0727 KEGG:ns NR:ns ## COG: SPy0727 COG0187 # Protein_GI_number: 15674782 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Streptococcus pyogenes M1 GAS # 1 650 1 650 650 1097 88.0 0 MTDELKNLEEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEA LAGFATHIKVFIEPDNSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKV SGGLHGVGSSVVNALSTQLDVKVYKNGHIHFQEYKRGVVVADLAVIGETEKHGTTVHFTP DPEIFQETTEFDFGKLAKRIQELAFLNKGLRISITDKREGLEQEKHYHYEGGITSYVKYI NENKDVIFDEPIYTDGEMDGISVEVAMQYTTGYHETVMSFANNIHTHEGGTHEQGFRTAL TRVINDYARQNKILKEKDDNLTGDDVREGLTAIISVKHPNPQFEGQTKTKLGNSEVVKIT NRLFSEALSRFLLENPAIAKKIVEKGILASKARIAAKRAREVTRKKSGLEISNLPGKLAD CSSNNAEMNELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRS LFTAMGTGFGSEFDVSKARYHKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIA QPPIYGVKVGSEIKEYIQPGANQEEKLRVALENYSVGRSKPTVQRYKGLGEMDDHQLWET TMDPENRLMARVSVDDAAEADKIFDMLMGDKVEPRREFIEENAVYSTLDI >gi|311100538|gb|AEKO01000007.1| GENE 328 303768 - 305492 1784 574 aa, chain + ## HITS:1 COG:SPy0728 KEGG:ns NR:ns ## COG: SPy0728 COG4477 # Protein_GI_number: 15674783 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Negative regulator of septation ring formation # Organism: Streptococcus pyogenes M1 GAS # 1 573 1 573 574 727 71.0 0 MSSGIVLLIVVAVILVIVAYLVGILIRKRNDSRIAQLEERKQKLFDLPINEEIEEVKKLH LIGQSQTTFREWNQKWIDISTNSFADIENHIFEAENMNDTFHFFKASGEINNIESQLDLV EEDIKSIREALSTLKEQEEKNSARVKHALDLYEELQNSIEENSDNFGSTMGEINKQLKNI ESEFAEFVTLNSSGDPVEASSILDRAEEHTIALGQISEKIPAIVAKLEDDFPDQLDDLES GYRKLIEQNYHFPEKNIERRFQEIREAIRSNSSELVSLDLDRAEEENADIQEKIDNLYSI FEREIASYKAVIRQKKILPDYLKHAKENNKKLQEELERLMLTYIFDETYAADVRSFASDI SSVETAVLPTLENFDNQVKPFSELEKIFEKSLNTLSAVENGQVEVFENLRAIAKNEAKAR DELDVYVNKLHVIKRYMEKRNLPGIPQSFLSVFFSTSAQIEALMDELSRGRINIDAVMRL TETSKNAIEHLEETAYLVVQNATLTEQLLQYSNRYRSFEPAVQSSFEHALKLFEVDHDYD ASLEEISYALETVEPGVTDRFVSSYEKTREQIRM >gi|311100538|gb|AEKO01000007.1| GENE 329 305603 - 306253 765 216 aa, chain + ## HITS:1 COG:L0085 KEGG:ns NR:ns ## COG: L0085 COG0560 # Protein_GI_number: 15672587 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Lactococcus lactis # 5 216 4 215 216 249 59.0 3e-66 MSEVKGLLVMDVDSTLVQEEVIDLLGEEAGVGREVAEITERAMRGELDFRQALNERVATL KGLPDSIFEKVYARIHFNKGAKELVDELHSRGFKVGLVSGGFHETVDRLAKEAGIDYVKA NHLEVVDGLLTGKIYGEIVTKDVKVAKLKDWAAENGLKLSQTIAMGDGANDLPMIKTAGI GIAFCAKPIVREQAPYQITEPNLYKVIQILDEVKTK >gi|311100538|gb|AEKO01000007.1| GENE 330 306504 - 307706 916 400 aa, chain + ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 190 383 1 194 196 275 71.0 2e-73 MRTVFGIDVSKASSEVAILVNGERVHSYTMPNDIIGFSHLLKDLKTVSNPEIIFEATGVY SRRLQAFLEENSYDYTRLNPLEAKKQLDSLRVRKTDKIDAEKLASSQFVLNRKPTYVQEE VYQNLHDLSRFYQNLTEDIVRTKNRLHKVLQVAFPEIENLLSTPTGEQYWNLVSIFPTKH WVLELSEVELKETIRNSTSKRISENRVGNLAEKLVGLAKQSYSAISKTSPMIEEVKYNAQ ELIRLTNRREQVLQQLIALAEPLPEYEILLSIPGIAETTATSIIGELGDIRRFKSANQIN AFIGIDLKHYESGDFLAQEHITKRGNPYARKIMYKCIHNIASASHTNPCHIADFYEKRKR QSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYTLAKSH >gi|311100538|gb|AEKO01000007.1| GENE 331 308100 - 308324 156 74 aa, chain + ## HITS:1 COG:no KEGG:str1518 NR:ns ## KEGG: str1518 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 74 5 78 83 101 79.0 8e-21 MLYEYPAIFYMIEEANRISFPNFGRIIKVASLFDVMTKSSVFLAHIITNYGDKDLPVPTA VSSIPNEEELVVFI >gi|311100538|gb|AEKO01000007.1| GENE 332 308377 - 309267 598 296 aa, chain - ## HITS:1 COG:CAC1538 KEGG:ns NR:ns ## COG: CAC1538 COG0697 # Protein_GI_number: 15894816 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 6 295 7 297 299 124 32.0 3e-28 MRHKIILGCLAAAACEILFGLSFIFTKSITAQASGLALISWRFVTAFFFVNLYLLARRRR VVINGRNLRPLTRIAILNPIIYFICETIGIRMTTASESGAFLACIPVVALIMSSLILKEW PSRWQVLGVTTTLIGIIIAVFAAGASTNFSLVGYFILGLAIVSYALYCVDVEKAGQFTSF EITYFMLASGCLTFGLFALSHSFLAGNLKELLTLPWSNSKFAITILYQGLGCSVIGYILS NFAIANIGVNRTASFIGISTIISILAAVVFLGEPFSQLQILAGILVVLGVYMANKN >gi|311100538|gb|AEKO01000007.1| GENE 333 309376 - 309633 210 85 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVFSKLTLASVSVLALLTLAACGNSKNKTDSSFSSSSSKVRKYSSSTDSSASVKVNKDG SAELNSENGNSAKTNGSNGTVSIGN >gi|311100538|gb|AEKO01000007.1| GENE 334 310103 - 310486 417 127 aa, chain + ## HITS:1 COG:SP1851 KEGG:ns NR:ns ## COG: SP1851 COG2050 # Protein_GI_number: 15901679 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Streptococcus pneumoniae TIGR4 # 8 127 9 128 134 144 61.0 5e-35 MQDKLHEIRVFENFQEELFETGHVIVATEVVEKSLNYFGNAHGGYLFTLCDQVAGLVALS TGDYAVTLQSNINYLKAGHLSDQLKIEGLCVHNGKMTKVVEVLITNQEEKILTRATFTMY VTGSVSE >gi|311100538|gb|AEKO01000007.1| GENE 335 310886 - 311086 123 66 aa, chain + ## HITS:1 COG:no KEGG:str1506 NR:ns ## KEGG: str1506 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 66 12 77 77 100 75.0 1e-20 MIALAPATCAFFKLRGPATAAVWECFHYAKKHFVMTDQPTVEVYPPGNRQAEDYEMEIWI PIKEEV >gi|311100538|gb|AEKO01000007.1| GENE 336 311087 - 311818 727 243 aa, chain + ## HITS:1 COG:SP0280 KEGG:ns NR:ns ## COG: SP0280 COG1187 # Protein_GI_number: 15900214 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pneumoniae TIGR4 # 1 235 1 235 240 311 66.0 6e-85 MRLDKFLVDCGVGSRSQVKNFLKKKQVTVNGQLETSPKTQIDENKDRIAYLDQELTHETF VYYLLNKPQGVISATENPRHKTVLDLLDDTARHKQVFPVGRLDIDTHGLLLLTNNGDLAH AMLSPKKHVDKIYQAKVAGVMDEEDILAFEKGIKLKDHTCQPAKLEIVSVDRNESTSWVQ ITIAEGKFHQVKRMVAACGKEVTELQRLSMGPLSLPNDLELGTWRRLTEEELEALTVFGI PLS >gi|311100538|gb|AEKO01000007.1| GENE 337 312122 - 313435 703 437 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 4 352 3 341 345 275 43 3e-72 MSMFLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDF RYNRKFKAKNGEKGMTKGMHGRGAEDLIVSIPPGTTVRDAETGKVITDMVEDGQEFIVAH GGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTILSVV TAAKPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTR VILHVIDMSASEGRDPYEDYLQINKELETYNLRLMERPQIIVANKMDMPEAEENLKEFKE KLAANYDEFDELPQIFPISSLAHQGLENLLEATAELLDETDEFLLYSEDDMEQEEVYYGF NEDERPFEISRDDDASWVLSGEKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGA KDGDIVRIGNFEFEFVD >gi|311100538|gb|AEKO01000007.1| GENE 338 313563 - 313760 285 65 aa, chain + ## HITS:1 COG:no KEGG:str1503 NR:ns ## KEGG: str1503 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 65 1 65 65 99 95.0 5e-20 MGDKPISFRDKDGNFVSAADVWNPKKLEELFTRLNPNRKLRLERERLAREEAAKHPELNE ETEQV >gi|311100538|gb|AEKO01000007.1| GENE 339 313839 - 314579 271 246 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 8 221 14 224 312 108 32 4e-22 MAELKIDVQDLHKSYGDNEVLKGIDAKFYEGDVVCIIGPSGSGKSTFLRTLNLLETVTSG KVVVDGYELSDPKTNLDKARENIGMVFQHFNLFPHMTVLENVTFAPVELGRMTKEEADKL AMDLLDRVGLADKADATPDSLSGGQKQRVAIARGLAMNPDIMLFDEPTSALDPEMVGDVL NVMKELAEQGMTMIIVTHEMGFARQVANRVIFTAEGEFLEDGTPDQIFDNPQHPRLKEFL DKVLNA >gi|311100538|gb|AEKO01000007.1| GENE 340 314579 - 316777 2264 732 aa, chain - ## HITS:1 COG:SPy1315_1 KEGG:ns NR:ns ## COG: SPy1315_1 COG0834 # Protein_GI_number: 15675263 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 1 539 1 531 546 671 66.0 0 MKKKLLTLFLSAMSVFFVFGAKVSAETISVVSDTAYAPFEFKDSDQIYKGIDVDIINEVA KRKNWDVNQTFPGFDAAVNAVQSGQADSLMAGTTVTDARKKVFTFSDTYYDTSIVIYTRS SDKVSDYKQLKGKTVGVKNGTAAQTWLDKNASKYGFTVKTFDTSDLMNNSLDSGSVDAAM DDTPVVKYAIGQGKDYAINIKPESIGSFAFAVKKGGKHEKLIKDFNEALKEMKKDGTYDK IMNKWLGDSEKSSSSKPSADLKLTGDANAKATPAKETYTISMDSSFAPFEYQNGSGKYVG IDVDIINAIAKNQGFNVKLTNPGFDASLNAVQSSQADAVLAGMTITDARKQIFDFSDSYY TSNIRLAVAKGSKIKSYKDLKGKTVGAKNGTSSYSWLEDHAGEYGFTVRAYDEASTMYDS LNSGSIDALMDDEAVLLYAIQQGRNFTTPIEGIATGDVGFAVKKGANPELIEMFNNGLAA IVKDGTYDKIINKYLDSNKSKEGSSKKATDETTIVGLIKNNYKQLLQGLGITLGLTLLSF AIAMIIGVLFGMMAVAPNQTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIENITGHQS PINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSLGVPYNTTMRKVILPQAVR LMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAILYLVIITCL TKLAKRLEKRLK >gi|311100538|gb|AEKO01000007.1| GENE 341 316976 - 317911 786 311 aa, chain + ## HITS:1 COG:SP1240 KEGG:ns NR:ns ## COG: SP1240 COG1266 # Protein_GI_number: 15901101 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 20 310 17 314 317 187 43.0 2e-47 MKRRILEKYTSRYDKVPSWLMIMLSCFIAFGYVLIGGFLSGIVVGIPMAIVLSFLMFNGD IQFQDINTISYKMFSNMYFQLGTFAFTALAIFFWVKVVEKRPIRTLGFFKGYIWLNLLKG WGFGTLLLLVSFLGTYLLGGLEFVKVDFSQRTVLYILSLIPFWFIQGGTEELVTRGWLLQ TVTNKLNLSWGIAISSSFFSILHLGNQGVTALSLISIVLVGILMALYMLKTDNIWGVAAL HGAWNFAQGNLVGVAVSGQNAGGSLLHFQARSGVPDWLSGGAFGLEGNLVTCLVLLVGII ILRLQLKKENF >gi|311100538|gb|AEKO01000007.1| GENE 342 317982 - 318602 219 206 aa, chain + ## HITS:1 COG:no KEGG:str1498 NR:ns ## KEGG: str1498 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 12 129 3 120 146 84 41.0 3e-15 MIVKLERGMIWVQIVYGLILLIASTSLFCWLLIDDYRFGNFVDNCVAFLVLLIFLHALTN LVDGIVRLKGHKKILEINNDTFIYYGRLCGRVTFEILLSEIDLVMKDWSTPMDDAKHSST IYYILKRIDDFGNIRSWERQRYRVLYIFFNDSKTALKYDKKRGFQTRKKRKYVAATRMIH IPIAEGEFFSDQEMNDYINERKNYDR >gi|311100538|gb|AEKO01000007.1| GENE 343 318592 - 320583 2208 663 aa, chain + ## HITS:1 COG:SPy1314 KEGG:ns NR:ns ## COG: SPy1314 COG0556 # Protein_GI_number: 15675262 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Streptococcus pyogenes M1 GAS # 1 663 1 663 663 1105 85.0 0 MIDRKEDNQFHLVSKYEPSGDQPQAIETLVDNIEGGEKAQILKGATGTGKTYTMSQVIQR VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDFYQPEAYVPSSDTYIEKDSSV NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYADSAVSLRPGQEISRDKLLND LVDIQFERNDIDFQRGKFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRICEIESLTGRNL GEVEHLVLFPATHFMTNEEHMEEAIKNIMEEMEAQVKQFEAEGKLIEAQRIRQRTEYDVE MLREMGYTNGVENYSRHMDGRKEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDQ ARKKMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTETVVEQIIRPT GLLDPEVEVRPIMGQMDDLLGEINARTEKGERVFVTTLTKKMAEDLTDYLKEMGVKVKYM HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI QTIGRAARNSEGHVIMYADKITESMQKAMDETARRREIQMAYNKEHGITPQTIKKEIRDL ISITKANEAEVAEDTVNYSAMNKKERQEAIKKLQKQMHEAAELLDFELAAQIRDMVLELK SMD >gi|311100538|gb|AEKO01000007.1| GENE 344 320594 - 321088 287 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|290511289|ref|ZP_06550658.1| ## NR: gi|290511289|ref|ZP_06550658.1| predicted protein [Klebsiella sp. 1_1_55] # 13 143 24 148 290 68 35.0 1e-10 MDIKVLQEKFCEYKELMNWFYIQGILRTDNLVGSYAEYLLSDKLNLELCDNSSKDVDAIE IVDNREIRYQIKSRRLNGREDGLNVEFGSVSISTENPTFDYLLVLVFSPTFEVDYAYKIP YESINMYSVKKSNGKRAIILNKKRIKQFEDNDDKIEDIKKKYLS >gi|311100538|gb|AEKO01000007.1| GENE 345 321147 - 321611 485 154 aa, chain + ## HITS:1 COG:SP1235 KEGG:ns NR:ns ## COG: SP1235 COG0494 # Protein_GI_number: 15901097 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pneumoniae TIGR4 # 1 154 1 155 155 162 52.0 2e-40 MSRSQATILTNMCLIEDGHGNIVMQIRDPKRYSWSGAALPGGHIEAHEGLVESVIREVKE ETGLTIKNPKLVGMKHWYTTDDERYLVFLYRTSDFEGDIHSTEEGEVRWVAREDVPKMEL AYDMLNLLRVFEEDQLSELFYRERLENDFLKEFW >gi|311100538|gb|AEKO01000007.1| GENE 346 321826 - 322638 1070 270 aa, chain + ## HITS:1 COG:SP0112 KEGG:ns NR:ns ## COG: SP0112 COG0834 # Protein_GI_number: 15900055 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 266 1 267 268 230 49.0 2e-60 MKTWKKLLLGFAGIFALMTLAACSSSKDTLEKVQDKGTLTVALNPYFAPFEFKTIQDGKD TIAGADIEIAKAIGDELGVKVKFSEMSFDNVLASVQSGKADIAISGISATKERQKIFDFS DTYYESETVLVVKKDATGTYKQTGDFAKKSVAVQKGSIQESIAKSNLSDANVVSLAQPGE AINELKSGQVEGVVLEKAIAQGYIEQNNDLAVSDIALKSDSKDAYAVAMPKGSDKLKAKV NKVIAKLKKEGKIDSYVQDAYALSLKSSTK >gi|311100538|gb|AEKO01000007.1| GENE 347 322650 - 323447 862 265 aa, chain + ## HITS:1 COG:SP0112 KEGG:ns NR:ns ## COG: SP0112 COG0834 # Protein_GI_number: 15900055 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 258 4 261 268 223 48.0 2e-58 MKKFWFILTALVATCFLVACSGSQGVNTKTIKEKKKIVVATESEFAPFEFKSLVNGKDTL VGADIELAKAIGERLGVKVEFSVMSFDNVLASVQSGKSDIAIAGISVTDGRKKVYDFSDS YYTSENVVIVKKDKVNDFTSADSLAKQTVGTQKGSVQETVAKKQISKASVVSLASNGEMI NELKSGQIQAVVLEKAIAEGYIAQNDDLTLANFNLKSDGSDAYAVATRKGSDDLLKEINT VIKETKDSGKFDQWLKEASTYKQSK >gi|311100538|gb|AEKO01000007.1| GENE 348 323693 - 324802 1097 369 aa, chain + ## HITS:1 COG:L91456 KEGG:ns NR:ns ## COG: L91456 COG0436 # Protein_GI_number: 15674014 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Lactococcus lactis # 1 368 1 373 376 426 54.0 1e-119 MKLPRFGVEEWLNVHEKSAIYDIAGVSIKALTMEELFELSDLDKDAFFAQLLKKKMDYGW IEGSPEFKAQVASLYKNMPVDNILQTNGATGATMLALYALIEPEDHVISMYPTYQQLYDI PKSLGADVDLWEIEEDDNWLPDLDQLRRLIRPNTKMICINNANNPTGALMDAAYLEELVA IAKEVDAYIFSDEVYRSFDQPAPSIVDLYEKGIAINSLSKTYSIPGIRVGWVASNTEVAD ILRDYRDYTMICAGVFDDMVATLVLENKEAILERNRQIVAENLALMDAWIAKEPKASWIR PDSVSTSFVKLDVNRPIEDFALELLQEYGVLVVPGNRFDKESHVRVGYCCDKEVLQKGLG KLSQFLNKC >gi|311100538|gb|AEKO01000007.1| GENE 349 324864 - 325658 1027 264 aa, chain + ## HITS:1 COG:SP1394 KEGG:ns NR:ns ## COG: SP1394 COG0834 # Protein_GI_number: 15901248 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 2 264 4 270 271 252 55.0 4e-67 MKKLFLGAMALLAAVTLVACGSKKDAYESIKENKKLVVAVSPDYAPFEFKTLVDGKDQVV GSDIKLAQAIADELGVKLEVTTMSFDNVLSSLQAGKADIAISGISVTDERKKTFDFSDPY YETQNAIIVRKDQESTYSSLDAFKGKKVAVQKGTIEEGLAKKQLKDSTVVSLTAMGEAIN EVKSGQVDAVDLEKPVAEGYVAQNPDLALASVALKVNDGDAKAVAMAKGNDKLKEAVNKV IKKLKDNGTYDEYIKDASKYTAVE >gi|311100538|gb|AEKO01000007.1| GENE 350 325822 - 326028 308 68 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55737452|gb|AAV61094.1| 30S ribosomal protein S21 [Streptococcus thermophilus LMG 18311] # 1 67 1 67 68 123 95 2e-26 MLHYLEGVNSMSKTVVRKNESLDDALRRFKRSVTKAGTLQEARKREHYEKPSVKRKRKSE AARKRKKF >gi|311100538|gb|AEKO01000007.1| GENE 351 326365 - 327567 916 400 aa, chain + ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 190 383 1 194 196 275 71.0 2e-73 MRTVFGIDVSKASSEVAILVNGERVHSYTMPNDIIGFSHLLKDLKTVSNPEIIFEATGVY SRRLQAFLEENSYDYTRLNPLEAKKQLDSLRVRKTDKIDAEKLASSQFVLNRKPTYVQEE VYQNLHDLSRFYQNLTEDIVRTKNRLHKVLQVAFPEIENLLSTPTGEQYWNLVSIFPTKH WVLELSEVELKETIRNSTSKRISENRVGNLAEKLVGLAKQSYSAISKTSPMIEEVKYNAQ ELIRLTNRREQVLQQLIALAEPLPEYEILLSIPGIAETTATSIIGELGDIRRFKSANQIN AFIGIDLKHYESGDFLAQEHITKRGNPYARKIMYKCIHNIASASHTNPCHIADFYEKRKR QSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYTLAKSH >gi|311100538|gb|AEKO01000007.1| GENE 352 327811 - 328209 543 132 aa, chain - ## HITS:1 COG:SPy0780 KEGG:ns NR:ns ## COG: SPy0780 COG1970 # Protein_GI_number: 15674825 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Streptococcus pyogenes M1 GAS # 8 132 1 120 120 153 71.0 8e-38 MKGFIVKMIKELKDFLFKGNVLDLAVAVVIGAAFNAIITSLVSDIITPLILNPVVKAANV ENLSKLSWNGIAYGSFLSAVINFIIVGTTLFFVVKAANHATALGKKEEAAEEDAAPSQEE LLTEIRDLLANK >gi|311100538|gb|AEKO01000007.1| GENE 353 328352 - 330163 1568 603 aa, chain + ## HITS:1 COG:SPy0781 KEGG:ns NR:ns ## COG: SPy0781 COG0358 # Protein_GI_number: 15674826 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Streptococcus pyogenes M1 GAS # 1 603 10 604 604 720 60.0 0 MVIDKALIEDIKSSTNIVDVIGEVVSLNRAGRNYLGLCPFHKEKTPSFNVIEDRQFYHCF GCGKSGDVFKFLEEYRQISFQESVKVLADRLGIAVTIDAPRQSQQQNSPNQAFYDLHEDA LKFYHAVLMTTKIGEAARAYLYERGMTDDLLKTFQIGLAPDEPDYLHQSVSKKYDEEVLT ESGLFNLSESNRLFDTFKNRIMFPLKNEFGKTIGFSGRVWTKEDIEKGQAKYKNTRATRI FNKSYELYHLDQAKPVIQKTHEVYLMEGFMDVIAAYRAGHVNAVASMGTALTPEHVNRLR KLTKKIVLTYDGDKAGQNAIAKSLELLSDFQVDIVKIPDNMDPDEYLQKTSEEALGKLLV ESRISDVEFWIGQLKPANVDNLQAEIAYVEQIAKIIAKSPSVTAQNSYISKVADLLPDFD FFQVEQAVNNERLTMRNQQTAQLSAASNSAYESSASGFRGTVKLPSTPKITGLRRAENQL FHRMLNHPMILNDYRMREEFFFQTPELEELYYILKQDGQIDTVALSLLSQEVQTAYYQVL EEILPPETSLEEVQAIEERRNHFLREQDFRKQSKQIRESSNHGDVDAAVEALQMLIAQKR DME >gi|311100538|gb|AEKO01000007.1| GENE 354 330167 - 331276 1487 369 aa, chain + ## HITS:1 COG:SPy0782 KEGG:ns NR:ns ## COG: SPy0782 COG0568 # Protein_GI_number: 15674827 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Streptococcus pyogenes M1 GAS # 1 369 1 369 369 627 94.0 1e-179 MTKKKQNTAFNVQVADFIRNHKKAGTAIDDEVTEKLVIPFVLDADGIDDLLERLTDGGIS ITDKDGNPSSKYVVEAPKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLSNEEEKEL AIAVENGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS KQLKDFIED >gi|311100538|gb|AEKO01000007.1| GENE 355 331330 - 331665 515 111 aa, chain + ## HITS:1 COG:SPy0783 KEGG:ns NR:ns ## COG: SPy0783 COG2151 # Protein_GI_number: 15674828 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Streptococcus pyogenes M1 GAS # 5 111 6 112 112 165 79.0 2e-41 MSEVKYTEAEIEKIKDRILEALEMVIDPELGIDIVNLGLIYDIRFQQDGYTEIDMTLTTM GCPLADLLTDQIYDAMKEVPEVTKTEVKLVWTPVWSVEKMSRYARIALGIR >gi|311100538|gb|AEKO01000007.1| GENE 356 331676 - 332602 996 308 aa, chain + ## HITS:1 COG:SPy0510 KEGG:ns NR:ns ## COG: SPy0510 COG0463 # Protein_GI_number: 15674614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 307 1 307 308 437 66.0 1e-122 MKTLAIVVPCYNEEETIHPFLKASQAVEKQMANQLAFNYYFVNDGSKDKTLEVLRQVSKQ IENVHYLSFSRNFGKEAGLLAGLEAAQGDYVTVMDADLQDPPELLIEMYAKIQEGYDVVG SRRADRKGEPSIRSLFAKAFYWLINKVSDTEMVDGARDFRLMTRQVVDAILELKEVNRFS KGLFSWVGFDVAYVSYENRERVAGETSWSFWSLLSYSLDGFINFSEVPLKLATWAGTFSF LISLVGIVFVIIRKLTIGGSVAGWASLVSIILFIGGIQLLALGIIGNYISKIFLETKKRP VYIVKEKG >gi|311100538|gb|AEKO01000007.1| GENE 357 332607 - 334082 574 491 aa, chain + ## HITS:1 COG:no KEGG:GALLO_1373 NR:ns ## KEGG: GALLO_1373 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 10 491 3 489 489 322 40.0 1e-86 MSGEFLGVFHNLKDYIKRNKFVLSLILGVYLLVNINISLAEYPYIDDIGRQILGYTGFSE HYSRYLSEFSARLIQGGAHLTDPGLTTNIITAFILTFASTILLFVLFPSKKVTPVLALAS TVIGINPWFLEPLSFRFDNPFMSLSILVSILPFIFWESRKLFSLCSVVCIYLMCNSYQAS SGIYILMTLTLLFLEVVYSGKLNIKSLVCSILSYVGGMVLYKIQITIKPPIFADQGSIPS LLHLPSIMLANAKGYLKNIYLQSTKVWILLFLVILILLVFNIISSSKQKKIVSLAFTFAW LALGSILSYGSYLILSEQFYLLRPRYEYGLGVFSSIVLVVSLGITNRNKIINVLKSVFSS LLVFYFLAFSFIYVSNLKQQNNTFEVQSAMLGNSLNKYLNDKNNVVNINRFVANSPIYEN AISVYPMISSLIMPNTNVSWDMTMRFNAITKLNVDFKPFDATTVNSEYKQLETTKMYDVY TKDNELFVVMK >gi|311100538|gb|AEKO01000007.1| GENE 358 334168 - 335019 1136 283 aa, chain + ## HITS:1 COG:SPy0784 KEGG:ns NR:ns ## COG: SPy0784 COG1091 # Protein_GI_number: 15674829 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Streptococcus pyogenes M1 GAS # 1 283 1 283 284 444 79.0 1e-125 MILVTGANGQLGTELRHLLDERNEEYVAVDVAEMDITDAAKVDEVFAEVKPTLVYHCAAY TAVDAAEDEGKELDYAINVTGTENVAKAAEKHGATLVYISTDYVFDGEKPVGQEWEVDDK PDPQTEYGRTKRMGEELVEKHVSNYYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVND QHGRPTWTRTLAEFMTYLAENRKDYGYYHLSNDAAEDTTWYDFAVEILKDTDVEVKPVDS SQFPAKAKRPLNSTMSLTKAKATGFVIPTWQDALKEFYKQEVK >gi|311100538|gb|AEKO01000007.1| GENE 359 335189 - 336391 539 400 aa, chain + ## HITS:1 COG:SPy0797 KEGG:ns NR:ns ## COG: SPy0797 COG2244 # Protein_GI_number: 15674839 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Streptococcus pyogenes M1 GAS # 1 393 20 417 428 279 45.0 8e-75 MSSAAVSVILLFIVTRALNSASADTYSFAYAIANLFVIVASFQVRDFQATDIREKYSFDT YFVTRIISNVAMVLLLVTYLIFYTNTHSNLGIIFWVSFFRVSEALSDVFQGLFQQKERLD IAGKSLFLRNTISTIVFALTLVISKNLLWSVISQTISSFVFIALFDYPHSKFFHRLNLMS VKPSNIINVLKDCLPLFINAFLLVSIYNQPKYALNDIFNQGLIGNGVQRDFSILFTPIFA MNLMIVFLRPMITQLAVFLEEKKISHFVTYKNNLFKILFGTCTLIFLIGAFIAIPALDIV YGTNLKQYQTSFVVLLLGGIASTFSTVCDNILTIFRKQHFLVISFIVGYIVSILTAKPLV SKFEIFGASLSFLCAMIAWLLASLVIYFVTNPYTIFRRKK >gi|311100538|gb|AEKO01000007.1| GENE 360 336397 - 337341 539 314 aa, chain + ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 4 209 6 221 344 121 33.0 2e-27 MKFSIIIPAYNVADYLENCVESILKQTYDNYEVIIVNDGSTDETGKIADDLSLQFKQINV IHQSNGGASKARNTGMKEVVGDYILFLDGDDFWSDIYFLDQVASELNKQLVDVVIFGYSY YYDNEIKEIPVSRLNDLIEATNFGLFNGPNWNKCISKELINKELSFPEDLVSEDSLYCSS IMKMMESFSVINSTQYMYRQNRVGSLTNVVKERNVLDTLKGISRGLSDEKSLSEVKRKAL NTYFTISYISILPYARPYLFNQEIRDLLIQYKYLLRNSSHINNKSFKMTGIFASILGINI STRLFSHLLKFYKK >gi|311100538|gb|AEKO01000007.1| GENE 361 337359 - 338081 590 240 aa, chain + ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 4 217 3 228 344 137 35.0 2e-32 MSNPTVSVIIPVYNAQEGIKQCLDSLLNQSFTDFEIILLNDGSTDNSLEVIKKYAADNDF IRVIDKENEGVAKTRNKGIQLANGKYIVFIDNDDFVDSDYLERFYNEIDQEQLDIVLGGY KRVNQEMKTLFKQDLTQSEWSKYIVVAPWARIYRTSFLTDNNIQFFDYPIGEDVIFTLTA YNLTERIKIIDYNGYNWFFNEKSISNTSQRGFNPNIDIVYFLSHLLQVAGDSKYIRYFIK >gi|311100538|gb|AEKO01000007.1| GENE 362 338340 - 339044 544 234 aa, chain + ## HITS:1 COG:L11285 KEGG:ns NR:ns ## COG: L11285 COG0463 # Protein_GI_number: 15672191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 1 230 8 237 241 237 50.0 2e-62 MIIPAYNEEESIFDTVTSILNYRKKVDFDLDYVVINDGSTDKTKQILEENHFNAVNLVMN LGIGGAVQTGYKYALEHDYDVAVQFDGDGQHDIESLSALLEPIRKNEADLVIGSRFVGDV KSEFQTTFMRRFGISVISNLIKWTTGQRVLDTTSGYRLADKDVIKQFAKRYPIKYPEPET IVHILKRKYRVVERPANMFERTGGVSSITPIKSIRYMLEVCSSIVIAAFMRESE >gi|311100538|gb|AEKO01000007.1| GENE 363 339044 - 339397 296 117 aa, chain + ## HITS:1 COG:no KEGG:STER_1439 NR:ns ## KEGG: STER_1439 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 117 1 117 118 150 97.0 1e-35 MSVLSIVMLVASIFFLYLVIRNINKNNILFEQAFMWIVISLVMIVISIFDVIPVYFAGLL GFELTSNFLLSLAIFFLLVIAFLQTMTLSKQKEQIKHLVQELSILKSHVEEKEEKNE >gi|311100538|gb|AEKO01000007.1| GENE 364 339390 - 340166 595 258 aa, chain + ## HITS:1 COG:no KEGG:STER_1438 NR:ns ## KEGG: STER_1438 # Name: not_defined # Def: cell wall biosynthesis glycosyltransferase # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 257 1 257 258 491 94.0 1e-137 MNDNHTWVICAYGESDYLEACIQSLKNQTLYSQIICYSSTPLDSIKELCQRYDIPFYTKQ GGGIGKDWNNAISFVGTKYATIAHQDDYYEPRYAEKVLAKMEKTSDVLIGYSDYFEEKNG LKIPANTNLKIKTLMLKTMNLFPSSHFWRNRVMAFGNPICCPAVTYNLEKLKNFYFDEGM KVSLDWYAWYKISEYKGRFVYVSDKLMCHRIHEESETSKTIADNTRSKEDLYMYQLFWPK WIANILMKQYVKSQKTNG >gi|311100538|gb|AEKO01000007.1| GENE 365 340358 - 343321 2211 987 aa, chain + ## HITS:1 COG:L6907 KEGG:ns NR:ns ## COG: L6907 COG0463 # Protein_GI_number: 15672188 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Lactococcus lactis # 5 306 1 317 324 221 43.0 4e-57 MDGKMNNLISVVVTCYNHEKYIEQCLRSVFNQTYTNIELIVLDDGSTDSSTQIIQEVLKD SPFETRFETHENVGVVNNRNLGLELIRGDYLLFVDSDNYLDADYVEQLYNKLTETNADIV YCDLYNPEKEEIYLKSREFDLTAFLNASFIDNCSLVRRSIIGNARYDEKLNRKKLEDYDF LLNLIINNGAKAVYQPSTKLNYRVFETGSISGRDSVRYHYEIYLDILEKYLDKLPHEVYK AICENLMVLEERLNSLLKHHSEVTDYVNRLKKERDQLEQRKYAQSKRLKDAHKEMELIRS SLSYRLGNALITPIKTAGVIAKNPKAIKNYLRALKVKVIQLRRRMTPLKVHQLRRLRNSQ RSVLSYNGKKALIYVIFESESRLQEYKLRFLQALAPLVDDVIVVINGQLHADDINTLETY GSVLTRDNKGYDTAAFREGIFAFGKDKLKDYDQLLLVNDTNIGPMRDLSQVFQEMADKQL DFWGISFGEEQEDVTKENPYGYIPKHLQSYFLVIEKLMLNDDDFYEYWTHLTDTDSRDKA IGRHETRFTKHFADLGYRFDAVVQEYEDSAMYIHPLKMLKAGSPLVKYTALKNYDEDQFL WQGLDRDSEVPDLLDFVAEKTDYPVSILENIVNKFKAVPRDQYILLIDGVENIIPQCTRY RVLNKAEQLRKHGFAVKVVNLSDFQLSMAQNASHIIIYRSPISPELLRLCHLAKEYGKPV FFDIDDLVFDTVYTDQLSYTQGLNSVEKGNYDAGVRNYGYMLENCDGAITSTNQLQEELY KYQSKVLLNRNLASDDLIAISSQYIKDYSQTSDIVKIGYFSGSISHNENFELIKPAIKQL LTKYSNVQLHIVGILDIPQDMKPFENQIVTHDYVDWDKLPALISEVDINLAPLVDSIFNR AKSEIKWIEAALVKVPTVASNIEAFSDAVVDGETGLLATDDQWFDKLEAMVLSPELRQKI ADAAYRAVLENCTLSKKDDMVTYFEQN >gi|311100538|gb|AEKO01000007.1| GENE 366 343380 - 344615 1102 411 aa, chain + ## HITS:1 COG:CAC0024 KEGG:ns NR:ns ## COG: CAC0024 COG4713 # Protein_GI_number: 15893322 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 41 403 87 444 456 78 23.0 3e-14 MFVFPINRVPDETNHARMTWETFHKPTETSFKWMDEIPSNDKVKLAEYKQIFAQKIDMSK EPFQFGVSLKTISFIPQLIGMTIGSWISPTVGMIIYMGRIFNSLAYILGIYFLIRYFKYG KTALMFISLLPIMVQQASSLSYDVMNYLEVMLALGFITNLADSKRFTNRNIIQVIGLAIL LLATKPNNVLLLGLIPFVPLEFEGFLAFLNRPVQAIKTFISKYKAVFYLLFVVGVVVVLQ FLMKNQGGLRHYGEVLRNTLFNPELNDNLNGILSLGMFGYLGNLTLQMPLWLIFIDIIVL TILFLSSKKDFFTKDFANASWILFLLEVLAAVTVMYIQWTPVVLGQGANISVGAQGRYFT PFIILLLPLVANTAKIDLSRQKRLKIATLTLIANFLVAMYLILFHYWGVFA >gi|311100538|gb|AEKO01000007.1| GENE 367 344619 - 345866 809 415 aa, chain + ## HITS:1 COG:BH1415_2 KEGG:ns NR:ns ## COG: BH1415_2 COG0438 # Protein_GI_number: 15613978 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Bacillus halodurans # 154 373 149 374 385 67 28.0 5e-11 MTKTILFISPTGTLDNGAEISIVNLMKFLVKKGYRVLNVFPDYKVPSQEEYQIELQKAGI ETHGLLAVKWWWEEAPGGSPGNHFLRVNSYNKNVKDIRNIIVDNKVDLVISNTVNVFQGA LAAAFEDVKLFWLIHEFPEGEFGYYKEKLDFIDTFSDEIFAVTGALTEYLEKCFPNRKIY SFAPYTQIEPKEGVKTESNDQHRIVSVGRLTQRKNQLELIKAFQMLDLAGTELVFLGAWD EDYKQLCDDYIAEQDLKSVSFLGHLDDPWSEITDKDLAVFPSSMETFGLVYVESVLNGIP TILSDNAGHKSAFEYMNEQGHIYPLGDLDALTRMISEVLDGFDQEKLEAVQAVPSLKERY SLESVYANITEKIEDDDLRHKKVTQKAIDFLNSRKALTKSVKSAVKKLFQLKKMN >gi|311100538|gb|AEKO01000007.1| GENE 368 346268 - 347188 990 306 aa, chain + ## HITS:1 COG:SPy0786 KEGG:ns NR:ns ## COG: SPy0786 COG0438 # Protein_GI_number: 15674830 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 306 77 382 384 414 63.0 1e-115 MAINYSLKLIKKEGIQAPIFYILGNTIGAFIVHFAKKIQSIGGILLVNPDGLEWKRAKWS KPVQSYLKYSEKEMTKYANLIISDNRGIETYIQNTYPWSRTTFIAYGTDLSKTTLTAEDT PVRDWYQKWQTQEKDYYLILGRFVPENNYETAIREFMKSSTERDLVIICNHEGNAYFDEL RQITGFDKDKRVKFVGTVYDQDLLKYIRNQAFAYIHGHEVGGTNPGLLEALAQTDLNLIY NVDFNHQVAQDTALYWNKEDGNLSQLIDSVDGQVSFEDLGNAAKANMKENYTWEKIVGEY EELFLS >gi|311100538|gb|AEKO01000007.1| GENE 369 347185 - 348123 597 312 aa, chain + ## HITS:1 COG:SPy0787 KEGG:ns NR:ns ## COG: SPy0787 COG0463 # Protein_GI_number: 15674831 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pyogenes M1 GAS # 1 310 1 308 310 377 63.0 1e-104 MKVTILMSTYNGENFLAEQIESIKQQTYTDWTLLIRDDGSKDKTRDIIKRFALEDDRITF INPDQTENLGVIKSFFTLLKYQESDYYLFSDQDDTWLPEKLSLQLEEASRYPSDKPLLVY TDLKVVNQDLEVLHESMIRTQSDHANTKLVQEMTENTVTGGVSLINHALAELWTGEEPNE LLMHDWYLGLLASAFGHLVYIDQPTELYRQHADNVLGARTLRKRMQNWIRPQTLFNKYWK LIKASQNQAENLLSLPLNAEDRELVENFVTIMDQGLRERYRRLKTYGYRKNRAFHTFVFT SLIVTKFMYKED >gi|311100538|gb|AEKO01000007.1| GENE 370 348124 - 348930 808 268 aa, chain + ## HITS:1 COG:SPy0789 KEGG:ns NR:ns ## COG: SPy0789 COG1682 # Protein_GI_number: 15674832 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 15 268 1 253 253 256 60.0 3e-68 MNFFSQKNRILLKELIKTDFKLRYQGSFIGYLWSILKPLMMFTIMYLVFVRFLRFDDGTP HYAVGLLLAMIFWGFFTEATNMGMLSIVSRGDLLRKLNFPKQTIVISSVLGAAINFLINL VVVFVFALINHVPIGFNTLVIIPLFIEVLLMAMGVAFILSALFVKYRDIGPIWEVVLQAG MYASPIIYSITYLLQRNQTFVAKVMMLNPIAQILQDMRHFIIDPVNPRGWDIINNKLIAF IPYAIPVVIFIIGFLVFNRNAKRFAEIL >gi|311100538|gb|AEKO01000007.1| GENE 371 348930 - 350132 1180 400 aa, chain + ## HITS:1 COG:SPy0790 KEGG:ns NR:ns ## COG: SPy0790 COG1134 # Protein_GI_number: 15674833 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 396 2 398 401 560 72.0 1e-159 MSNNIAVKVDHVSKYFKLPTEASQSLRTTLVNRFKGIKGYTEQHVLKDISFEVEKGDFYG IVGRNGSGKSTLLKIISEIYVPEKGKVTIDGKLVSFIELGVGFNPELTGRENVYMNGAML GFSTEEVDAMYDDIVDFAELHDFMNQKLKNYSSGMQVRLAFSVAIKAQGDILILDEVLAV GDEAFQRKCNDYFMERKQSGKTTILVTHDMSAVKKYCNKAVLIEHGLVKVVGDPDEVANQ YSFDNAAGQKVSNDDVVVENPKITDLQVKLLNDNIISPDQDISFEISYDVNEDIETYIAF SLTDIDRGIWIYNDNSMDNKTSGSGRKTLTYKCSLSHLNNIKLKLQVSVRDKEDQMIAFA DSDNSPIILLNRNDIEDDDKSAKDSATGMVQRNGKWEIRE >gi|311100538|gb|AEKO01000007.1| GENE 372 350133 - 350843 395 236 aa, chain + ## HITS:1 COG:SPy0792 KEGG:ns NR:ns ## COG: SPy0792 COG3754 # Protein_GI_number: 15674835 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis protein # Organism: Streptococcus pyogenes M1 GAS # 1 236 1 237 581 258 52.0 7e-69 MKRLLLYVHYNKYDELSGHVLYQLEQLRPLFSKLIVISNSQLTESATLTLKELGIDEVIQ RENLGFDFAAWRDGMAHVGFEHLTDFDSVTLMNDTCFGPLWDITDIVEEFEKRPNVDFWG MTNFRKTKYFDEHLQSYFMFFKKHVVASEAFQKFWTSIKTFTDVQDVIDNYETRVTSVLL EVGYRYDAVFNTIAEEAGDLIHPDFSYYRPISTLEHKVPFIKLKAFTDNEKKEDYF >gi|311100538|gb|AEKO01000007.1| GENE 373 350987 - 351775 329 262 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477260|ref|ZP_04061898.1| ## NR: gi|228477260|ref|ZP_04061898.1| rhamnosyltransferase [Streptococcus salivarius SK126] # 1 262 286 547 547 390 80.0 1e-107 MAIHVHISDLERLKVFFDSKLSAFYYFTLSGHLDKNQVENNLLNSFDKDRFQIVSQKFDN HYHALVSLASQLSEYDFIGHFHTADFGNEGKLVDEATRLALIDMLLDEKKVSSIFADFPE VGLVFADLSKELYWTDAIGTLNQNQAAKLDNECQKTIKNSLHVFQGSMWLSKDFLEKIIL KDKRIFYNSDENSLPYLFYRKAWDVGIDYRIISSEKISFAERYKLHIIQMSQVAEPISLT EKFSAYRKALLKKLGLNKSSAV >gi|311100538|gb|AEKO01000007.1| GENE 374 351821 - 352507 460 228 aa, chain + ## HITS:1 COG:SPy1118 KEGG:ns NR:ns ## COG: SPy1118 COG2003 # Protein_GI_number: 15675098 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Streptococcus pyogenes M1 GAS # 1 226 1 226 226 259 58.0 4e-69 MYSIVSEEAGLLPRERLLQKGAEVLSDQELLAIVLRTGTKSESVLSMANRILTGMTSLAD LSRLSLNELQEIPGIGRVKSIELKAMVELAKRIEKAELARSEQIMSSQQMARRMMLDIGD KPQEHLVAIYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGE AYPSRNDIDFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREEREDFEL >gi|311100538|gb|AEKO01000007.1| GENE 375 352565 - 353260 743 231 aa, chain - ## HITS:1 COG:SPy1119 KEGG:ns NR:ns ## COG: SPy1119 COG2071 # Protein_GI_number: 15675099 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Streptococcus pyogenes M1 GAS # 1 231 1 231 231 295 61.0 4e-80 MTKPIIGITANVRPNPAHEDINWSYAPSGFVEGVQKAGGLAILLPVSDPSEAKNYISMID KLILIGGQNVDPKFYNEENHASENDFFLERDLFEMALIEEATKQKKPIFSICRGTQLMNV ALGGSLHQDIERHWQDKPSDYLYHEMIIDENSKLAEIYGLETSINSFHHQSIKHLASDLH VIARDPEDNTVEAVESNTPDLRYLGVQWHPELLLHKREEDLKLFEYVVNEL >gi|311100538|gb|AEKO01000007.1| GENE 376 353253 - 353912 593 219 aa, chain - ## HITS:1 COG:SP1090 KEGG:ns NR:ns ## COG: SP1090 COG2344 # Protein_GI_number: 15900958 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Streptococcus pneumoniae TIGR4 # 7 212 8 213 213 331 78.0 6e-91 MTFEKNIPNATAKRLSLYYRIFKRFHRENIDKASSKQIAEAIGIDPATVRRDFSYFGELG RRGFGYDVSKLMTFFAELLNDNATTKVVLVGVGNIGRALLHYRFQERNRMQLVMAFDTDD NELVGSQTEDNIPIYGISQIKDKIAQEDIKTAILTVPSVKAQEVAELLVDAGIEGILCFS PVNLNLPRHVVLQYVDLTSELQTLLYFMKEEEKARRNND >gi|311100538|gb|AEKO01000007.1| GENE 377 354055 - 354402 395 115 aa, chain - ## HITS:1 COG:no KEGG:stu1462 NR:ns ## KEGG: stu1462 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 115 1 115 115 207 95.0 6e-53 MAFEKSIHLTNCKYRYTISPNVKKFTLRDTTFVQNKIGNYELHRLLEKVPNSGEGFPLKI TINKDLTGFKLSITDKSGLRNVNIFKNEDHHILQEKFYFLMQSLVDRQVFEQEEV >gi|311100538|gb|AEKO01000007.1| GENE 378 354404 - 355516 1181 370 aa, chain - ## HITS:1 COG:SPy1122 KEGG:ns NR:ns ## COG: SPy1122 COG1104 # Protein_GI_number: 15675102 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 369 1 370 375 431 61.0 1e-121 MVYLDNAATTSLNTAAISAMTHVMTETFGNPSSLHAYGRKASKELREAREEMAKQFQVPA RKLIFTSGGTEGNNTAIKGYALANQAKGKHLITTAIEHHSVLHTMAYLEERFGFEVTYIQ PENQVITAQQIADVLRDDTILVSVMYANNETGQLLPIKEIGDLLANHQAAFHVDAVQVAG KLPIHPEELGADFLSISAHKFHGPKGVGLLYHNDLHFDNLLHGGEQEEKRRASTENLVGI AGMTAAYKHASDHYQDNYQHVEKIRQVFLDTLTVPYEINDGGSSLPHVINISFPGKENGP LLTLLDLADFAVSTGSACTAGTVDPSHVIQALYGKDSDKLKTAIRISLSEENTAEELQAL AEKLNQIIGD >gi|311100538|gb|AEKO01000007.1| GENE 379 355520 - 356491 1232 323 aa, chain - ## HITS:1 COG:SPy1123 KEGG:ns NR:ns ## COG: SPy1123 COG0462 # Protein_GI_number: 15675103 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 318 1 318 326 504 79.0 1e-142 MVHQKANPQLKLFSLSSNPEIAEKIAKATGLPLGKVSSRQFSDGEIMINIEESVRGDDIY IIQSTSNPVNDHLWELLIMIDACKRASANSVNVVMPYFGYARQDRIAASREPITAKLIAN MLVKAGVNRVLTLDLHAVQVQGFFDIPVDNLFTMPLFAEYYNEKGFTGSDVVVVSPKNSG VKRARSLAEYLDAPIAIIDYAQDDSEREEGYIIGEVEGKTAILVDDILNTGKTFAEATKI LERGGVKDIYAVASHGLFAGGAAEVLNATPIKEILVTDSVATKEKVPTNVKYLSASELIA NAITRIFERQPLSPLFAYTANED >gi|311100538|gb|AEKO01000007.1| GENE 380 356857 - 357432 550 191 aa, chain - ## HITS:1 COG:SPy1124 KEGG:ns NR:ns ## COG: SPy1124 COG4116 # Protein_GI_number: 15675104 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 191 1 191 192 200 59.0 1e-51 MNHLEIEYKTLLTKDEYNRLAVLFSHVTPVTQTNYYIDTPQSDMRNKKLSLRIRTLPTHG ELTLKIPEKVGNMEYNVTMDCADAKAMTKSLNFPDCQIKSILLERGVKLEDLTILGHLTT TRREYQTNIGLMALDVNVYADKKDYELELEVSDAKKGKDDFDAFLKENNIDFKYAKSKVA RFVATLKRDKD >gi|311100538|gb|AEKO01000007.1| GENE 381 357533 - 358198 564 221 aa, chain + ## HITS:1 COG:SPy1125 KEGG:ns NR:ns ## COG: SPy1125 COG2357 # Protein_GI_number: 15675105 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 218 3 220 223 335 80.0 5e-92 MDWEEFLDPYIQAVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVASIEEKIALRGLS VENLAKDMQDIAGLRIMVQFVDDVDEVLGLLRRRSDMTIVSERDYIRNRKHSGYRSYHVI VSYPVDTIDGRKEILAEIQIRTLAMNFWATIEHSLNYKYQGNFPEEIKLRLETTARIAYQ LDEEMRKIRDDIRDAQLLFDPINRTLKDSVGNSDDTDEDLF >gi|311100538|gb|AEKO01000007.1| GENE 382 358173 - 359009 894 278 aa, chain + ## HITS:1 COG:SPy1126 KEGG:ns NR:ns ## COG: SPy1126 COG0061 # Protein_GI_number: 15675106 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Streptococcus pyogenes M1 GAS # 1 277 1 277 278 404 71.0 1e-113 MTQMKTFSDKMKVAIIANGKPQSRRVASKLFNTFRDDPDFYLTKKNPDVIISIGGDGMLL SSFHMYEKELSRVRFVGIHTGHLGFYTDYLDSEVDQLIETLRKDNGDKISYPLLNVTLTL ADGRSFTSIALNEAAIKRNEKTMAADVCLNDVLFESFRGDGLSVSTPTGSTAYNKSLGGA VLHPTIEALQLTEIASLNNRVYRTLGSPLIVPKHEKITIYPTRMGSYTLSVDNKTYTNRN VKKVEFSIDQRKISFVASASHTSFWERVRESFIGDMEE >gi|311100538|gb|AEKO01000007.1| GENE 383 359006 - 359902 314 298 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 36 276 40 274 285 125 36 4e-27 MRYEFTVGRSCRVKTFLKEHDISKGLLAKIKFEGGHIWVNGEEQFATYPVHEGDVVAIEI PDEVPHETLKPIPFDLDIVYEDDNFLVINKPYGYASIPSVNHDNTMANFVKYHFVSNNYP NQRVHIVTRLDKDTSGLMLFAKHGYAHARMDKQLQQKSIKKHYYALVEGDTKLEQQGEII APIARDVDSIITRRVHKSGKYAHTSYRLVGDYGRVKLVDINLHTGRTHQIRVHFAHLGLP LLGDDLYGGSLDYGIKRQALHCHRLAFIDPFTKKEMVHASSLTDDFETVIMNLQTKKD >gi|311100538|gb|AEKO01000007.1| GENE 384 359916 - 360899 1287 327 aa, chain + ## HITS:1 COG:SPy1128 KEGG:ns NR:ns ## COG: SPy1128 COG0280 # Protein_GI_number: 15675108 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Streptococcus pyogenes M1 GAS # 1 327 3 329 331 507 79.0 1e-143 MRSLFGELREGISGKGVKIVFPEGNDDRVVRAAARLKFEGLVDPIILGDPVEVHKILNDL GFADFNYTIINPETYEGFEKMKEKFLEIRKGKATVEDAEKLLRDVNYFGVMLVKLGLADG MVSGAIHSTADTVRPALQIIKTKPGISRTSGVFLMNREDTNHRLMFADCAINIEPNSQEL AEIAINTAETAKVFGIDPKVAMLSFSTKGSAKSPKVDRVVQATNIAKEMRPDLAIDGELQ FDAAFVPATAAIKAPDSDVAGHANVFVFPGLQAGNIGYKIAQRLGMFEAIGPILQGLNKP VNDLSRGASAEDIYNLAIITAAQALNN >gi|311100538|gb|AEKO01000007.1| GENE 385 361127 - 363097 347 656 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984587|ref|ZP_01817855.1| hypothetical protein CGSSp3BS71_01047 [Streptococcus pneumoniae SP3-BS71] # 478 656 58 234 234 138 41 6e-31 MKKSKWLALVGVALLSVGALAACSSKSNTSGTTYGYIYSSDPETLDYITSNTGPTTTAVT NAVDGLMEADKYGNLVPSVAEDWSVSQDGLTYTYKIRKGVKWYTSDGEEYADVTAKDFVT GLKHAADAKAGALYLVQDSIAGLSDYLSGANKDFSNVGVKAIDDYTLQYTLKKPEPYWNS KTTYSLLFPVNGDFLKNKGKDFGKSTDPTSILYNGPFLLKSLTAKSSIELTKNENYWDKK NVHFDAIKLTYDDGSDQEAQERGFTDGAYNIARVFPTSSNYASVEKKYKDNIYYTAAGAS TSAIGVNIDRQSYKYTAKKTDAEKSSTKKALLNKDFRQSINFAIDRTVYQSQVNGKDGSA KAIRNLFVPSDFVSAGNKTFGDLVTEKMSSYGDEWSGVNFADSQDGLYNAEKAKTEFAKA KDALQADGVQFPIHLDLPVDQSSKLNVTQAQSLKQTIEKSLGNDNVVIDINQLSSDDMQN ATLNAANAAAEDWDISNGVIWSPDYQDPSTYLDIFKTTSSENTKTFMGYDDPNNAAAAQV GLKDYDALLDSAASETSDLNVRYDRYAQAQAWLEDSSLVIPLTVGNGAAPVISRLAPFTG ASMQVGDKNSSDYFKYVKPQEKVVTKKEYEQSREKWLKEKKASNEKAQKDLEKHVK >gi|311100538|gb|AEKO01000007.1| GENE 386 363158 - 364651 1451 497 aa, chain + ## HITS:1 COG:SP1890_2 KEGG:ns NR:ns ## COG: SP1890_2 COG0601 # Protein_GI_number: 15901717 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Streptococcus pneumoniae TIGR4 # 251 497 1 248 248 407 82.0 1e-113 MKKYILLRTLRSLLSIFVVTALTYTIIYTMVPRRLIFRQDPNYNKIAKTADSKANYENTI FERMGYIDYYDTKELQEKASSLDKSVTTKPTKANKAIYQKYVDSLGHGWSLHQFKQSKQF YATRDVPVLERVFEFYTHLFEFDNTGWVKDKTNPNLKRYIRIENDPAIGWSVVGSGTKHK YLLYFNSQFPFVHQNFVKMNLGTSYPTYAEQGVLDVITQGQGQTQSSEVNFPTGKKISSV DIYSRTYKSPSQADARDRSYYGDDPYTATKSRYQYPSMVTSSAIAGLIGLVLSYALAIPL GSYMARFKNTLFDSVSTGVLTFLLSLPTIALVYIIRLIGSEIGLPDSFPILGAGDWRSYV LPSVILGLLSTPGLAIWIRRYMIDLQSQDFVRFARAKGLSEQEISNRHIFKNSMVSLVSG IPASIVGVITGATLTETIFAYPGMGKMLIDSVRASNNAMVVGLVFIFTALTIFSLLVGDI LMTIIDPRIKLTSKGGK >gi|311100538|gb|AEKO01000007.1| GENE 387 364651 - 365577 1064 308 aa, chain + ## HITS:1 COG:SP1889 KEGG:ns NR:ns ## COG: SP1889 COG1173 # Protein_GI_number: 15901716 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Streptococcus pneumoniae TIGR4 # 1 308 1 308 308 491 81.0 1e-139 MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIY PMFSKFDFNDVSKVNDFSLRYVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFL NVIIGLIVGAVWGISKTFDMIMMEIYNIISNIPDLLVVIVLTYSLGSGFWNMIFAMTVTG WIGIAYTIRIQIMRYRDLEYNLASRTLGTPTAKIVVKNIMPQLVSVIVTMASQLLPGFIS YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLAD ASDPRTHR >gi|311100538|gb|AEKO01000007.1| GENE 388 365587 - 366672 1357 361 aa, chain + ## HITS:1 COG:SP1888 KEGG:ns NR:ns ## COG: SP1888 COG0444 # Protein_GI_number: 15901715 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 355 1 355 355 638 87.0 0 MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTG MLEENGRVASGSIDYRGQDLTKLKSHQDWAPIRGAKIATIFQDPMTSLDPIKTIGSQIVE VIVKHQGKSVKEAKKMAIDYMDKVGIPDAEKRFNEYPFQYSGGMRQRIVIAIALACRPDV LICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE YATVEEIFYEPCHPYTWSLLSSLPQLADDKGELFSIPGTPPSLYTPVVGDAFALRSDYAM QIDFEEKAPQFQVSDTHWAKTWLLHEDAPKVEKPAVIQNLHEKIRANMGFAHLGDEEEGN V >gi|311100538|gb|AEKO01000007.1| GENE 389 366665 - 367594 635 309 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 24 291 37 296 329 249 49 3e-64 MSEKLVEVKDVEISFGEGSKKFVAVHNANFFINKGETFSLVGESGSGKTTIGRAIIGLND TSNGEIIFDGKKINRHLSHSEKNDLIRRIQMIFQDPAASLNERATVDYILSEGLHNFHLY KDEEDRKAKIKEIIKEVGLLEEHLTRYPHEFSGGQRQRIGIARSLVMQPDLVIADEPISA LDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGTIVEVAETEELYN NPIHPYTKSLLSAVPIPDPILERKKVLKVYDPNQHDYSVDKPEMVEVCPGHFVWGNKKEI ETYRKEQSK >gi|311100538|gb|AEKO01000007.1| GENE 390 367644 - 368429 825 261 aa, chain - ## HITS:1 COG:no KEGG:str1437 NR:ns ## KEGG: str1437 # Name: not_defined # Def: ABC transporter permease protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 261 3 263 263 363 94.0 5e-99 MFWKLVKYELQSVRKWYLGIYGIAILLSIPLGLMLRKLTVTFEHSHKEPSLLFMAFFTLI VIATIVVWGTIYIATIVLIIKRFATSVFGREGYLSNTLPVSAHQLILSKLLAAFILDTIS SLVVLASIGIIATFNLDMKDILLTTSYFGQILKEMGALYLFIPTTILGTIGSILFYYLCI SIGNLFNNNKVLMGFVAYFAIQAILFFIGFFFGIGASLTGNATNTIINNSSYIFSLVQSL ILIAASYFGTYYIMTKRLNLD >gi|311100538|gb|AEKO01000007.1| GENE 391 368441 - 369139 236 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 206 1 215 311 95 31 5e-18 MTDIVTLTNLTKTYNGIPALRDVTMSIPSGKIIGLLGPNGSGKTTLIKILNGLLQPTSGL VTINGFQPSPITKAQVAYLPDTTYLDESKTIQYYLDLFQDFYADFRYPLALQLLQDLKLQ PDLHLKDLSKGNKEKVQLILVMSREAKLYLLDEPIGGVDPASRDYILKTIINQYSEDASV IISTHLIADIESILDEVVFLKYGQIELQGDADNIRQAHGKSIDKLFREMFHN >gi|311100538|gb|AEKO01000007.1| GENE 392 369144 - 369521 455 125 aa, chain - ## HITS:1 COG:SPy1285 KEGG:ns NR:ns ## COG: SPy1285 COG1725 # Protein_GI_number: 15675238 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 120 1 120 123 130 55.0 6e-31 MAWTFDEKSPIYLQIAYRVKLKIASKELSMGQQLLPVREFAQEAGVNPNTVQRAFQELEK EGLVYSARTSGRFVTEDEKLIDQKRHEIAQSLMKNFVTEMAAIGFSSPEIKAIITNYIEQ TGKDL >gi|311100538|gb|AEKO01000007.1| GENE 393 369724 - 370497 939 257 aa, chain + ## HITS:1 COG:SPy0567 KEGG:ns NR:ns ## COG: SPy0567 COG0561 # Protein_GI_number: 15674657 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 253 9 265 265 243 50.0 2e-64 MDGTFLDHLGTYDKTRLDNLLAACEAKDYVFTVASGRALLALEELFDGFVDRIAIIAENG ALVQYKGEVLFESKLEPKDYLQIADTTLALPTCEGILLSGRRGAYAPNDADPAYLKAMER YYENVMATDLEAGTDDIFKVTAKFQGDTVMERGDYLNTIFEDMTAVTTGFDSMDIILKGI DKGFGLYHLCQELGRKASDVVAFGDNLNDMEMLTFAGCAVATENARNEIKAVADEVIGHH KDGAVFDYMEGLVGSDV >gi|311100538|gb|AEKO01000007.1| GENE 394 370490 - 371308 819 272 aa, chain + ## HITS:1 COG:SPy0568 KEGG:ns NR:ns ## COG: SPy0568 COG0561 # Protein_GI_number: 15674658 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 4 272 3 272 274 289 58.0 3e-78 MSEIKLLALDLDGTLFTKDKQVTAENRAALKSAEAEGVHVVITTGRPLPAITHILEDLGL LDDKHYSVTFNGGLVQRNNGDILIKKEMSREDLKQIYAVFEPLGLPMDVISDGIVYGVPS KGNHSLYRQANPTLTFVDVESIDDIPENIVYNKVVTVCEEAFLDAQIEKLPKQLYQNFEV FKSREIILEVMPKGVHKAVGLKLLSDYLTIDKSQVMAMGDEENDLTMLEWAGLGVAMANA VPKAKAVAKAVTTKTNEESGVAEAIHKYILEK >gi|311100538|gb|AEKO01000007.1| GENE 395 371319 - 372623 879 434 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 116 434 5 324 336 343 53 1e-92 MGLFDRLFGQEENQSQETVANQEFSETEALDNQDLSTSESQAEQLSESETQVEEISSTES VEESESTVTEESEVTVDNHFADVMADYYAKKAQVAAAAEKGETVTFEAVQTRKVEEKTEE VQASKTETEQEKYNRTLKKTRTGFAARLNEFFANFRRVDEEFFEELEEMLILSDVGVNVA TQLTEDLRYEARLENVKKTEDLQRLIIEKLVDIYEKDDVYKEHINFQDGLTVMLFVGVNG VGKTTSIGKLAHKYKQEGKKVMLVAADTFRAGAVAQLVEWGHRVDVPVVTGAEKADPASV VFDGMEKALAEGVDVLMIDTAGRLQNKDNLMAELEKIGRIIKRVVPEAPHETLLALDAST GQNALSQAKEFSKITPLTGLVLTKLDGSAKGGVVLAIRQELDIPVKLIGFGEKIDDIGEF HSEEFMQGLLTGLV >gi|311100538|gb|AEKO01000007.1| GENE 396 372844 - 373473 794 209 aa, chain + ## HITS:1 COG:SPy1632 KEGG:ns NR:ns ## COG: SPy1632 COG0194 # Protein_GI_number: 15675507 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 209 1 209 211 343 87.0 1e-94 MSERGLLIVFSGPSGVGKGTVRQEIFSTPDHKFEYSVSMTTRAQRPGEVDGKDYFFRSRE EFEELIRNGQMLEYAEYVGNYYGTPLTYVNETLDKGIDVFLEIEVQGALQVKKKVPDAVF IFLTPPDLNELEERLVGRGTDSEEVIAQRIERAREEIALMSEYDYAIVNDEVPLAAERVK RVIEAEHFRVDRVIGHYRNMISDKKLSDK >gi|311100538|gb|AEKO01000007.1| GENE 397 373495 - 373809 472 104 aa, chain + ## HITS:1 COG:SPy1630 KEGG:ns NR:ns ## COG: SPy1630 COG1758 # Protein_GI_number: 15675506 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Streptococcus pyogenes M1 GAS # 2 95 1 94 104 103 84.0 8e-23 MMLKPSIDKLLDKVPSKYSLVILQAKRAHELAAGAEPTQEFSAVKSTLQALEEIESGNVT IHPDPEAKRELARLKVIQARLAAEEEERKIKEQIAKEKEEGDKI >gi|311100538|gb|AEKO01000007.1| GENE 398 373990 - 376347 2289 785 aa, chain + ## HITS:1 COG:SPy1629 KEGG:ns NR:ns ## COG: SPy1629 COG1198 # Protein_GI_number: 15675505 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Streptococcus pyogenes M1 GAS # 1 784 14 793 794 1103 66.0 0 MQTDRPYSYLVPESMQGQIAIGMRIHVPFGKGNRLLQGFVIGFGEQENVRKLPDLKSIAE LLDYEPVLNQDQLDLADQMRHTVFSYKISILKSMLPGLLNSQYDKVIMATDKLSEEERDI FLQGRDHILFSQLSKEQGQAIPRLVESGRVTVDYIAKDKQNIKTEKHYSVQRGILETLDI SQRAKKRMELRDFLLEKNESGKLVDLHKLFSRDVVKFFIGTGALSITEVEVNRADSYFEK VEKTDFLELNTQQAYAVEVMTGQIGHGGKPFLLEGVTGSGKTEVYLHLIERTLAMGKTAI VLVPEISLTPQMTNRFISRFGDLVAIMHSGLSDGEKFDEWRKVRSGQAKVVVGARSAIFA PLENIGAIIIDEEHEATYKQESNPRYHARDVALLRAKSHGAVLVLGSATPSIESRARAQK GVYHFLELTERANPKAKIPQVEVVDFKDFVGRQEASDFTPPLLEKIRERLARKEQVVLML NRRGYSSFVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAIPHVCPNCQSRQIR YYGTGTQKAYDQLTELLPEARVIRMDVDTTRKKGAHEKLLETFGSGQADILLGTQMIAKG LDFPNVTLVGVLNADTSLNLPDFRSAERTFQLLTQVAGRAGRADKEGEVIIQTYNPSHYA IRFAQQQDYEGFYAYEMAIRRQLAYPPYFYTVGITLSHKDEEFVIRKSYDVMAYLREHLS DKVTFLGPTPKPIARTHNLYHYQIIIKYRFEDSLEETLNRILDMTQEPENKDLRLIIDHE PQNFT >gi|311100538|gb|AEKO01000007.1| GENE 399 376365 - 377300 1067 311 aa, chain + ## HITS:1 COG:SP1735 KEGG:ns NR:ns ## COG: SP1735 COG0223 # Protein_GI_number: 15901567 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 310 1 310 311 472 76.0 1e-133 MTKIVFMGTPAFSATVLEGLLTDERYDIVAVVTQPDRAVGRKKEIRMTPVKEVALAHDLP IYQPEKLSGSEEMAQLMSLGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGGAP IHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDQDNVGTMFEKLAVLGRDLLLET LPAYIAGEIKPVPQDASQVTFSPNISPEEERLDWNKSARDIFNQIRGMYPWPVAHTLLDG KRFKIYEGDLVEGQGQAGHIIEKTKKSLVVATGQGAISLKSVQPAGKPRMAIADFLNGVG RNLEVGDAFGQ >gi|311100538|gb|AEKO01000007.1| GENE 400 377284 - 378612 1011 442 aa, chain + ## HITS:1 COG:SPy1627 KEGG:ns NR:ns ## COG: SPy1627 COG0144 # Protein_GI_number: 15675503 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Streptococcus pyogenes M1 GAS # 3 440 1 438 440 624 69.0 1e-179 MHLANDWKKTARGQALEVLEEVFQEGAYSNIALNAHLSKSYLTDKDKALVTEIVYGTVAR KITLEWILAHVIEDRDKLEPWVYDLLLLSLYQLAYLDKIPAHAVVNDAVSIAKNRGNKKG AEKLVNAVLRKLSIQPLPDPSEIKRVNKRYSVQYSLPVWLVKKLIDQYGEKRALAIFQSL FVRNKASVRVTDASRLEEIAEATGAERSVLSPVGLVKSSGYFAGTDYFKEGLLTIQDETS QLVAPTLGIQGMEEILDACAAPGGKTVHMASYLTSGHVTALDLYDHKLVLIEENAQRLGL ADKVKTQKLDASQVHQVFPTDSFDKILVDAPCSGIGLIRRKPDIKYNKDLQDFESLKSVQ LDILSSVCQTLRKGGIITYSTCTIIAEENQEVIQAFLESHPDFEQVALDHPCKDIVVNGC LAITPEQYLTDGFFIAQLRKKV >gi|311100538|gb|AEKO01000007.1| GENE 401 378656 - 379393 832 245 aa, chain + ## HITS:1 COG:SPy1626 KEGG:ns NR:ns ## COG: SPy1626 COG0631 # Protein_GI_number: 15675502 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 244 1 244 246 319 66.0 3e-87 MEISLLTDIGQKRSNNQDFVNKFVNKAGVTLVIVADGMGGHRAGNIASEMSVTDLGRDWI NTDLRELSHIRDWMIAAIDEENRKIYELGQNEEYKGMGTTIEVLALVDNAVIFAHVGDSR ISLIRNGEYKQLTNDHSLVNALIKAGQLTEEEAAVHPQRNIITQSIGQAAPVEADLGVQQ LEPGDYILANSDGLTNMISIEQIIHIVNSPGFVEEKTSRLVAAANEAGGYDNITVALIKV ESEEG >gi|311100538|gb|AEKO01000007.1| GENE 402 379393 - 381261 1721 622 aa, chain + ## HITS:1 COG:SPy1625_1 KEGG:ns NR:ns ## COG: SPy1625_1 COG0515 # Protein_GI_number: 15675501 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Streptococcus pyogenes M1 GAS # 1 317 1 313 345 510 83.0 1e-144 MIQVGKLFAGRYRILKSIGRGGMADVYLANDLILDNESVAIKVLRTNYQTDQVAVARFQR EARAMAELSHPNIVAIRDIGEEDGQQFLVMEYVDGSDLKRFIQDHAPLSNQDVVRIMGEV LSAMTLAHQKGIIHRDLKPQNVLLTKDGRAKVTDFGIAVAFAETSLTQTNSMLGSVHYLS PEQARGSKATIQSDIYAMGIMLFEMLTGHIPFDGDSAVTIALQHFQKPLPSILAENRNVP QALENVVIRATAKKLENRYNSTLEMSRDLVTSLHPSHSRDSKVVFDDMMDTKTLPKVDSV PSVGPEKKVSPKPSEPTPAPSKQPREKASLAKKKKNPFSTLLKVFLGLVFIGIIIFAYLV FTNPDNVQVPNVVGQELSTAQTKLESAGFKVGDVNEVENDSVDKGKVIKTDPTAGTTRKE GTSIDVYVSSGSKGFTLKNYKGKNYKDAIEDLTSNYGVSEDQIDIQHVEDDDAKEGEILS QSPEKNKSFNPKDSKAKIKFRVATPKTITMPDVTGLTVSTAVQTLNRKDISSSSIEYHDY NTGVKLDKSKVPSNTEVLYQDPQVGTAVDGTVILYVSVVTESSSIQQSSSASTTHSSSST SSSSESTASSTETATEATHTEQ >gi|311100538|gb|AEKO01000007.1| GENE 403 381638 - 382165 187 175 aa, chain + ## HITS:1 COG:L136943 KEGG:ns NR:ns ## COG: L136943 COG1226 # Protein_GI_number: 15672896 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Lactococcus lactis # 39 140 4 105 140 80 39.0 1e-15 MDLLAIVPYNEVFTFLCFSRVGRFARLVKISRLISLSSKLKHNSNRINRRNGFYFLLSVN SIIILISSAIIARVEHHNFIDAIWWSVATVSTVGYGESVPKTLVGKVIAVVLMFSGITTL GLLTNSLNNILVRSGRQTERKLAEFEKELAEQRAILEEIRSTVLAMSRKMDKNDD >gi|311100538|gb|AEKO01000007.1| GENE 404 382513 - 383016 630 167 aa, chain + ## HITS:1 COG:SPy1623 KEGG:ns NR:ns ## COG: SPy1623 COG4758 # Protein_GI_number: 15675500 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 3 140 85 221 228 153 54.0 2e-37 MWNIYVVLAILVGVAYVMINHFSQVKKKNRYALIQFKEDDLNPQAVRNQWIGTRMEPVSD RYDFDDINIIRFFGTDVIDLTQVIVSGRENVVILQKLYGPTTILVPIDVSVKLNISAIYS SVTFFNEDEYDLRYERLTLQGAEYEHAHRTVKLILNVGAGPVEVRRK >gi|311100538|gb|AEKO01000007.1| GENE 405 383013 - 384023 878 336 aa, chain + ## HITS:1 COG:SPy1622 KEGG:ns NR:ns ## COG: SPy1622 COG4585 # Protein_GI_number: 15675499 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 334 1 333 334 322 53.0 5e-88 MKKQYLFLILIYSVVVLIGVTLVVMDSFNLNFSLVFGSISQAFHFFFNMFFVVLSLLILL YILWAIANDNSMRSVNQDLRRIINNQPVKRQGDIELDKNMMRLSHKMRKLTKDLQKTENA QALQSRDILKKERGRIARDLHDTVSQELFAASMILSGVSQMVGQLSKEDLHNQIQAVEAM LTDAQNDMRVLLLHLRPTELENKTLQEGLQMILKELTDKSNIRVVYKDMVKKVPKRIENN LFRIAQEFISNTLKHAKASQIEVYLYQNSQEIQLKMLDNGVGYDLNASTDEMSYGLKNIQ ERVDEMAGTVQFLSAKGKGTSIDVRVPILRGEDNVE >gi|311100538|gb|AEKO01000007.1| GENE 406 384013 - 384657 722 214 aa, chain + ## HITS:1 COG:SPy1621 KEGG:ns NR:ns ## COG: SPy1621 COG2197 # Protein_GI_number: 15675498 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 3 213 2 212 213 326 82.0 2e-89 MSNKINVILVDDHEMVRLGLKSFLNLQGDVEVVGEAGNGRDGIDLALELRPDVVVMDLVM PELDGVQATLELLKEWPEAKILVLTSYLDNEKIYPVIEAGAKGYMLKTSSATEILNSIRK VYRGEEAIETEVDNKIKYHDSHPDLHDDLTARERDILALLAKGYDNQTIANELFISLKTV KTHVSNILGKLNVDDRTQAVVYAFRHHLVSQDDE >gi|311100538|gb|AEKO01000007.1| GENE 407 385332 - 385850 522 172 aa, chain + ## HITS:1 COG:SP0778 KEGG:ns NR:ns ## COG: SP0778 COG0806 # Protein_GI_number: 15900672 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Streptococcus pneumoniae TIGR4 # 1 172 1 172 172 262 77.0 3e-70 MTYYNVGKIVNTQGLQGELRVLSVTDFADERFKKKSVLALFDDKDNHIMDVEIASHRKHK NFDIVKFKGLYHINDVEKYKGCSLKIAEENLTDLDDGEFYYHEIIGLDVYEGDSLIGQVK EILQPGANDVWVVKRKGKKDLLLPYIPPVVLDVDVAAGRIEVELMEGLDDED >gi|311100538|gb|AEKO01000007.1| GENE 408 385840 - 386559 872 239 aa, chain + ## HITS:1 COG:SP0779 KEGG:ns NR:ns ## COG: SP0779 COG0336 # Protein_GI_number: 15900673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 235 1 235 239 390 80.0 1e-109 MKIDILTLFPDMFAPLEHSIVGKAKDKGLLEINYHNFRENAEKARHVDDEPYGGGQGMLL RAQPIFDTFDKLNVTKPRVILLDPAGRTFDQAYAEELAQEEELVFICGHYEGYDERIKTL VTDEISLGDFVLTGGELAAMTIVDATVRLIPEVLGKEASHKDDSFSSGLLEFPQYTRPAE FRGMKVPDVLLSGHHVNIRRWRMEQSLRKTWERRPDLLENYAFTDEERHILEEIKVEGK >gi|311100538|gb|AEKO01000007.1| GENE 409 386561 - 387559 231 332 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 6 316 1 304 306 93 27 2e-17 MSEEKIYDITIIGGGPVGLWAAFYAGLRGMTVNIIESLSELGGQPAILYPEKKIYDIPAF PQTTGAELTENLLTQLKRFEDRVSIRLKEEVQTFEKTDGIFTITTSKGQHLSKAIVIACG NGAFAPRPLGVDNEEDYADNNLFYNVHSLDQFAGKKVVIAGGGDSAVDWANHLDGIAESV TLIHRRDAFRAHEHSVELLHQSSVNVMTPYVPLEIKGENGLAQSLTVQKVKSDEVVELPL DALIVSFGFSTNNKNLRNWNVDYKRSSVTVNAQFETSQEGVYAIGDAAEYEGKIDLIAVG MGEAPIAINQAIQYIDPDGKNRPVHSTSLIEE >gi|311100538|gb|AEKO01000007.1| GENE 410 387757 - 390072 2256 771 aa, chain + ## HITS:1 COG:SPy0458 KEGG:ns NR:ns ## COG: SPy0458 COG1674 # Protein_GI_number: 15674577 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 769 30 800 801 1030 72.0 0 MLWTFFFAFVLIFPVFRLGFFGITLYNLFRVFVGSMAYPLIFAIYIYLFGFKWLRKHSNY VTGFWMVFAGLLLEFHAYLFSLERMSGLDIFPGTKDLLFGELVSVQVARFAGGGMLGALL YQPISFLFSNIGSFMIGCLIILLGAFILSPWDVLDIMDYAKGIWKRGSEKRLERTAKRQE KKAERQAQKEREAQERAEAERLADLTVDEETGEILDDAAEELPQEAEIFEPEPEISDYAS EDYYDNLPPEDYEDFQEDYAPYPEELPTAEFPPSMVVEGDDAPVEVDFTPKELLQYKLPQ IDLFAPDKPKSQSKEKNIVRKNIRILEDTFKSFNIDVKVERAEIGPSVTKYEVKPAVGVR VNRISNLADDLALALAAKDVRIEAPIPGKSLVGIEVPNSEIATVSFRELWEQSKTDPNKL LEVPLGKAVDGSARSFDLGRMPHLLVAGSTGSGKSVAVNGIISSILMKARPDQIKFLMVD PKMVELSVYNDIPHLLIPVVTNPRKAAKALQKVVDEMENRYELFSKFGVRNIAGYNAKVE DWNAQSQEKQIPLPLIVVIVDELADLMMVASKEVEDAIIRLGQKARAAGIHMILATQRPS VDVISGLIKANVPSRVAFAVSSGTDSRTILDENGAEKLLGRGDMLFKPIDENHPVRLQGS FISDDDVERIVTFIKDQASADYDESFDPGEVSENDFGGGSSANGGSSEGDPLFEEAKALV LETQKASASMIQRRLSVGFNRATRLMEELEEAGVIGPAEGTKPRKVLMTQE >gi|311100538|gb|AEKO01000007.1| GENE 411 390282 - 392477 1803 731 aa, chain + ## HITS:1 COG:SP1118 KEGG:ns NR:ns ## COG: SP1118 COG1523 # Protein_GI_number: 15900985 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 5 727 6 723 759 681 48.0 0 MDNLLTVHFHSMHGDYSRYSMWKWLDGYWGEEAHFSREDDFGLVGQLTFPANRFIDYVNL LVKTEDWSKQTHDYRIRRFLGDAPNAIWVVEGDPTVYYSKQAAMTSHSFEGRDQHAFDMA LRRQEFDQKWGFQGWLGHKYEKGSTEFRLWAPLARRVQLLLFKKDSKKSKVIKMSRGTSV NKDRHEMNTHGVWSVSVPGDLDGLAYQFRVYHEESFYQDTRDPYSIALSLNNKKSLVVNP ERLVPKGYQKVTRQEANWRNANACSSVICEMHLRDFSISETSGVKKAYRGTYLGACQKGT KNDQGDVTGFDYIKRMGYNYVQLQPVFDHHKTYDKNGNLLYNWGYDPENYNVPDRQFAVD QKNPLAPILELKKMIQVYHEAGIGVIMDVVYNHTYSSYSSPFQLAVPAYYYRMHDNGSFQ DGSGCGNETASEKEMYRKYMIDSLTYWAEEFGVDGFRFDLMGLHDVATMNAIRSAMDDID PRILIYGEGWDMGIGLPVDQKAKKDNSALMPRIGFFNDNARDAVKGAEVYGHISNGYVSG APLEDKIAKSLLGSRGFVNYLMPGQVLNYIEAHDNYNLNDLMHHLHPHDSPEDIEKRIYL ANALNLTMQGMCFMQLGQEFQRSKMVATGEDGNYTEADVQRAMNSYNAPDEVNRVDWNQV TLKKELVDKIAKLIERKKTVAEFSYRSYADIYDNLYVTKADFASGIVELHISGKLDETLV FDNMKKDLEIY >gi|311100538|gb|AEKO01000007.1| GENE 412 392649 - 394529 1467 626 aa, chain + ## HITS:1 COG:SP1121 KEGG:ns NR:ns ## COG: SP1121 COG0296 # Protein_GI_number: 15900988 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 626 1 625 642 951 71.0 0 MNLDEAMYTFGTGENFHLQNYLGVHELEGEEGFVFRVWAPHAEQIQVIGDFTGWFDTPLD MTQNHIGVWEATSSLPEEGQLYKFLVKRKGGQVVEKMDPFATYLEPRPGTGAVIRKQKAK KWKDGLWMGCRKRFGFQKRPVNIYEVHASSWKLKEDGQPYTFKELKEELIPYLVKMNYTH VEFLPLMAHPLGMSWGYQLMGYFAFEHTYGTPEEFQDFVEACHQNNIGVLVDWVPGHYTQ NDDALAYFDGTPTFEYQDHDRAHNYRWGALNFDLGKNQVQSFLISSALYWIENYHIDGIR VDAVSNMLYLDYDEGPWMPNKDGGNRNLEGYGFLQKLNREIKKRYPDVMMIAEESTAATP ITQPIEEGGLGFDFKWNMGWMNDILRFYEEDPVYRQYDFNLMTFSFMYCFNENYVLPFSH DEVVHGKKSMMHKMWGDRYNQFAGLRNLYAYQLCHPGKKLLFMGSEFGQFLEWKHDYQLE WGNLEDEMNQKMQAFTSHMNAFYKDHKSLWQIDDSYDGIEIIDADNRAESVLSFIRKGDK GDKGDILVCVFNLTPVERKDFTIGLPIAGIYEEVLNTEMEEFGGVWKEGNPDTRTQKAKW KDYENTLSFTLPALGASIWRVKRRLK >gi|311100538|gb|AEKO01000007.1| GENE 413 394720 - 395862 1308 380 aa, chain + ## HITS:1 COG:SP1122 KEGG:ns NR:ns ## COG: SP1122 COG0448 # Protein_GI_number: 15900989 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 380 1 380 380 692 90.0 0 MKNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFGLSNCANSGINNVGVITQY QPLALNNHIGNGSSWGLDGVNSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSINPEY VLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFGIMNTDANNRIVEFEEK PENPKSTKASMGIYIFDWKRLRNMLVSAEKNAVGMSDFGKNVIPAYLKTGESVYAYEFEG YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNVIATPNFFGEHAQVEDSLVVDG CLVDGTVKHSVLSTNAQIREGAVVEDSVIMSGAVIGKGAKIKRAIIGEGAHVSDGVEIDG TEEVQVVGYNEVVGVSKDED >gi|311100538|gb|AEKO01000007.1| GENE 414 395852 - 396988 1150 378 aa, chain + ## HITS:1 COG:SP1123 KEGG:ns NR:ns ## COG: SP1123 COG0448 # Protein_GI_number: 15900990 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 376 1 377 379 557 75.0 1e-158 MKIDKYSAILGNTVGFHDMDGLTDQRPIASLPFGGKYRLIDFPLSNLANAGIRSVFGIFQ NENISSVFDHIRSGREWGLSTLLSHYYLGIYNTPVDSSTVDKEYYHQILTYLKRSGSDQT VALNSDVLVNIDLNQVFHLHNVTKQKVTVVYKKLPKELISDVNSILDIDESDKVLKHELF QGGDKEVYNMSIDIFVVDTPFLIEKLEEEAAKEEPRKLRYVLRDLAVAENAFAYEHTGYL SNIHSVKSYFDANLDMLESQKFYSLFAPNQKVYTKVKNEEPTYYADSSEVKVSQFASGSI VRGKVENSVISRNVYLSEGSSVNHSIIFPRVKVAKGATVKYAIVDKDVEIAEGVTIRGTE NNPVVIKKGSVVTEDIVR >gi|311100538|gb|AEKO01000007.1| GENE 415 396985 - 398415 1389 476 aa, chain + ## HITS:1 COG:SP1124 KEGG:ns NR:ns ## COG: SP1124 COG0297 # Protein_GI_number: 15900991 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 476 1 476 477 744 72.0 0 MKILFVAAEGAPFAKTGGLGDVIGALPKSLVKNGHEVAVILPYYDVVSAKFGNQVEDLGF FYTNVGWRRQYVGIKKIVRDGVTFFFIDNEQYFNRGTVYGEWDDGERFGFFQMAALELME KVDFIPDILHVHDYHTAMIPFLLKEKYHWIQAYQGIKTVFTIHNIEFQGQFDSGMLWEIF GVGYERYADGTLRWNDCLNWMKAAVLYADRVTTVSPSYAGEIQTPEFGKGLDQIMRMESG KLSGIVNGIDTDLLDPETDTHIPYHFSVDDLSGKAKDKVALQERVGLPVREDVPLIGIVS RLTDQKGFDLVVNELHNILQHDVQIVLLGTGYSDYENSFSWFGHAYPEKMSANITFNLEL AQQIYAGCDIFLMPSAFEPCGLSQMMSMRYGTLPVVSEVGGLRDTVEPFNPVTGSGTGFS FGNFSGYWMVQILEKALDVYKNNTDSWKQLQHNAMTRDFSWDTASLAYVDLYKQLV >gi|311100538|gb|AEKO01000007.1| GENE 416 398628 - 399464 840 278 aa, chain + ## HITS:1 COG:L99884 KEGG:ns NR:ns ## COG: L99884 COG0058 # Protein_GI_number: 15672682 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Lactococcus lactis # 6 268 3 264 800 267 49.0 2e-71 MQFENLTKGQFIRDFKDTLHQEQLIRVAKATPTEIFTALAGLIRKYYTDTWIERKHALSD NQEKIAFYFSIEFLPGRMLETNLLNLGILDLVKECFAELDIDFREVVEAEHDMALGNGGL GRLAAAFMDSLANTGYPGFGNGLRYRYGLFKQRIVDGYQVELPDSWFGSTGNVWEIRKDH DIVDVKLFGDVVLESNEEGRFVPTYKNAQVLRAVPYDVPQIGYQNGVINNLRLWDVEIPE EYELDYPTLEARRRVKDITAILYPNLSSRNLQPSSRML >gi|311100538|gb|AEKO01000007.1| GENE 417 399503 - 400063 561 186 aa, chain + ## HITS:1 COG:no KEGG:SGO_1185 NR:ns ## KEGG: SGO_1185 # Name: not_defined # Def: acetyltransferase # Organism: S.gordonii # Pathway: not_defined # 1 185 1 183 184 231 72.0 8e-60 MALRSQLITKEFPDLDRVERLNNEAFPEEERIPLSEFLQLDGRDDYHFFAFYDEDDFVGF ASVLYNAKVFYVSFFAIVPQMRSHGYGSEIIDKLVDFYGPSRSMVLEVERLDEPNDNPEQ RAARWDFYKRNGFKTSNAFLEYEGLSFEILYRGDHFDEEAYREIFYKLQENAYFDFSIKH RCLSDL >gi|311100538|gb|AEKO01000007.1| GENE 418 400101 - 401090 341 329 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 328 90 421 422 370 61.0 1e-102 MAETSIVEKNCQISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDK LPAIMSWDEFGFKKGDLAFVAQNYETNELITILDNRRQTTIRNYFLKYPLKARQKVQFIT MDMSGAYIPLAHRLFPNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHW RLFQKDSRKLSLNSFYSKTFRQTLAPHEVVEKTLNFSEELANYYNLYQLLLFHFQEKRVD EFFELIEENRSKVNHYFQTVFRTFLRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFG FRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100538|gb|AEKO01000007.1| GENE 419 401132 - 401356 113 74 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 63 1 63 422 69 57.0 1e-12 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKTLK SLFSSKLELQLYYV >gi|311100538|gb|AEKO01000007.1| GENE 420 401587 - 403116 1289 509 aa, chain + ## HITS:1 COG:no KEGG:LAR_1315 NR:ns ## KEGG: LAR_1315 # Name: not_defined # Def: hypothetical protein # Organism: L.reuteri_K # Pathway: not_defined # 180 503 7 332 343 220 37.0 1e-55 MKKVILQYLASALTVILILGLVVFDRHQNQYLVTKVNDPEISYIYQDSLENLDKLALSRA GVIQSYQLDPLSVRKENGKIRLALHINHSYDMQVNLVLKADIYGDLSVVEVTPSKALKLA LEAETYQKRLTLISQKVDAIITRDHWDQGIKPAYVAQVRSKMKKTSLNQLDKVLQKIDQE SKEVGSDTYTAFFQASQLPNHDKLNLVMTHMQVYVDKYQFLQLGKSGYKFSKKLEPTSPF YSYFREAIMETYQTDLGLGEDELGIKLHLFRSWIDKQSMDYIRANYKGKTDLDKLLAYSK DRKIHLDYTTGASYHNRSLGDFTYPENMKIQLPQTSVMGSYGVSNSRFIEFIVNMDTGRF VSEWNFYKKRKDGSIDSNPKHYKIEDGADIADTDSANYGLSKGLNADLPAYLNNSHTYLD VRHPADNAIRRKMVRKWKNAKNVLNGGRYADIVKKGGLKDLETWRQVKAEDRLQVYNAYL DYIRSHLVLNGFDSFYQETYKSQGGDKKN >gi|311100538|gb|AEKO01000007.1| GENE 421 403055 - 403693 431 212 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477136|ref|ZP_04061774.1| ## NR: gi|228477136|ref|ZP_04061774.1| hypothetical protein STRSA0001_0007 [Streptococcus salivarius SK126] # 1 212 1 212 212 395 96.0 1e-109 MGLTAFTKKPTSPKVETKKTETLDSVLVAKNFYRVRDAYAIKLYGQDEGMSFDVAGQRLF GSNIAIKDGLLYGSSLGDLTIEVYFQGEVSYLLEATQKLPVDKNRIKANHYSQDIVLHNV WSSLEGQETSNSIITQFQDKDLLKLRISYNKEFLPTKIQGFYNSQTFNGWRDLFYIDYPY SDQEAFNQAQDAYIEHIQYMETHPEEEAGEFG >gi|311100538|gb|AEKO01000007.1| GENE 422 403908 - 404054 111 48 aa, chain - ## HITS:1 COG:no KEGG:smi_1536 NR:ns ## KEGG: smi_1536 # Name: not_defined # Def: transposase # Organism: S.mitis_B6 # Pathway: not_defined # 9 48 361 400 400 67 85.0 2e-10 MLTFRHPLQLTRSPTKPHTIASIHRLIRTMYYLITHNKLYDYSLAQNR >gi|311100538|gb|AEKO01000007.1| GENE 423 404383 - 404562 124 59 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 57 214 270 422 88 75.0 3e-18 MDMSGAYIPLARKLFPNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNH >gi|311100538|gb|AEKO01000007.1| GENE 424 404513 - 404977 128 154 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 137 1 141 422 157 60.0 8e-39 MRLIKNTTELIGIKDQNIKISLVFETDTHKEIQAKLDYPAPSCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLRLKKRRFQCKNCRRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVAL TDIARRLRVSTSTVYRKHDGYVWSLYSTGSQTLP >gi|311100538|gb|AEKO01000007.1| GENE 425 405638 - 406567 501 309 aa, chain + ## HITS:1 COG:MT3575 KEGG:ns NR:ns ## COG: MT3575 COG0119 # Protein_GI_number: 15843081 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Mycobacterium tuberculosis CDC1551 # 4 259 10 259 334 108 26.0 2e-23 MFKLMDVTLREGSYVVNNALTKSESKKLVHELNKAKIDLIEIGYLGNISKDSGVEKCDSE YLDFLTDGEILKWEGKFSVMINPEKFSQSTAEILADRRIGMVRLTVTKRNLERVKEIINS LSKYNITISTNLIRVSRLGHKELNELVNELVDTNTDIIYLADSNGALLPEDIKNMFFSLK HLIMKKRGKQRLGFHAHNNLGMAIPNALAAIEVGCDFIDASILGYGKSSGNLSLELLLSL MRRQNFIYKWNITKILSLANQLTTVVRKSGFYLSQPEGAIIGMKNINLDEVQEIYKVKGI SSLLDEENK >gi|311100538|gb|AEKO01000007.1| GENE 426 406567 - 406812 251 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDRKWYYKIGNGNNIVLILPRKDGNEMTVGEWEKLYLTLGANFTLVIIDIPEYLCRRNNS KFPKTTDYMADVLNNILVKKK >gi|311100538|gb|AEKO01000007.1| GENE 427 406851 - 407324 209 157 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIAQKFIYKYSEIPTIFISTIIKSNLKVQTVFNSWKNNLHFLGEKGFNVNLASWVKGRIL EENSLNQSKGFSVIKEELSLEAISSHNFKEENTISKKETLVIFGKNSPLIGMDETIPFTD FFKNITICPIADSGMRVLEENPKSSYKKIKQFIEENS >gi|311100538|gb|AEKO01000007.1| GENE 428 407321 - 408427 342 368 aa, chain + ## HITS:1 COG:MTH184 KEGG:ns NR:ns ## COG: MTH184 COG0473 # Protein_GI_number: 15678212 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Methanothermobacter thermautotrophicus # 1 363 1 329 331 226 36.0 8e-59 MKSIAVLPGDGIGIEVMEACVPIFKELNLDIKLKYGEIGWKCWINSANPVPNETWNLIKN CDAVLVGAITSKPKHEAEQELKVKSSNTTDYVSPVIQLRQKLQLFANVRPIVSLINNKSF EVYIIRENTEGLYSGLDFNPIPEPLENFINESTSKYSNKLKNGAATIRIITEEGFNRLLK FSSEWALKHGKSNIVIADKPNVFRNSSDIIFRLIKKYSLDYPMLNYTVENIDAVAMWLVK KPQKYEIVICENQFGDILSDVGAAVMGGLGLAYSGNYGLKETAYFEPVHGSAPKYSGQNK VNPMAMFLSIAMLLNFLGYKEASQSIQKAVEYTAKDKRFCTFDLSGAATLSESAKHIIEE AVKIYGNL >gi|311100538|gb|AEKO01000007.1| GENE 429 408414 - 409088 417 224 aa, chain + ## HITS:1 COG:RSp1233 KEGG:ns NR:ns ## COG: RSp1233 COG0684 # Protein_GI_number: 17549454 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Ralstonia solanacearum # 2 213 4 213 221 124 38.0 1e-28 MEIYDKLKDLKTLDTAAISDALDSLNINGGLTGITPQTEKCNLVGQAYTIQYIEPTESEK KQKNAANFIDDIPEGYIPVLANNGRMDCTVWGDILTDVAIKNGIPGTVIDGLCRDIRHIR DCSYKMFSKGVFMQSGKGRTVMSASKVAVKIGEVHIKFGDYIRGDENGIVVIPQEHVDQV IQMAKIVVDKEKKIRNMIKKGERLDIARETFNYSHAWEDKDEIF >gi|311100538|gb|AEKO01000007.1| GENE 430 409075 - 409905 298 276 aa, chain + ## HITS:1 COG:no KEGG:PSPTO_3200 NR:ns ## KEGG: PSPTO_3200 # Name: not_defined # Def: hypothetical protein # Organism: P.syringae # Pathway: not_defined # 2 237 13 256 290 89 29.0 1e-16 MKFFDLHTHAAPDLYQRRYTVDSLEKELIESDSFAVFKSHTNSTVPLTLNSKRIFGSIVL NEFQGGLKLPPVVSQFIISQKPFIIWMPTLTGYVSPSIKQKKFHSALDFDYPRNQISINE KLKSNVIDILKFAGENGIPVASGHSSKTEVELLLHEAMKFNVRLIVTHPFYKLTNFSVEE LYRMSKRYPNIYFECNILMNFINKGTIKRDIELIDAVGQERVFIASDLGQTNRMTVSDGY DYYFNKLTSYSNFSQNIYNDIFYFTPQKILFGERKI >gi|311100538|gb|AEKO01000007.1| GENE 431 409907 - 410242 237 111 aa, chain + ## HITS:1 COG:L51063 KEGG:ns NR:ns ## COG: L51063 COG1085 # Protein_GI_number: 15672818 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Lactococcus lactis # 3 109 8 119 261 99 43.0 2e-21 MEPLVFNTSIAKKKPSNSDECPFCHLEQLTNIIDKNDGLIWLDNKYNTIENTYQTLIIES EDHYGDISNYSYAYNRRVINYIIKSFLKLSDQSRFKSVAMFKNYGPLSGEV >gi|311100538|gb|AEKO01000007.1| GENE 432 410374 - 410670 106 98 aa, chain + ## HITS:1 COG:L51063 KEGG:ns NR:ns ## COG: L51063 COG1085 # Protein_GI_number: 15672818 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Lactococcus lactis # 1 89 166 255 261 85 45.0 2e-17 MGYCEFNIKSRTSYINKTSDVIKDVVGFILKKYFNKSCESYNLFFFLQNNNLICKVVPRF IVSPYFVGYRVSQVNNIERMKEIKYEFLNYVKECHFEK >gi|311100538|gb|AEKO01000007.1| GENE 433 410642 - 411583 195 313 aa, chain + ## HITS:1 COG:BS_yrdR KEGG:ns NR:ns ## COG: BS_yrdR COG0697 # Protein_GI_number: 16079715 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 8 310 3 304 321 209 40.0 8e-54 MLRSVILKNRFFKGILSCLIAGSVFGAQWPIAGSALQIVDPYWFTLIRYLIVASILAIIL FYKEGKEGFKLHRKEFPKILFLGTMAFCAYNFLVFAGQQIAGTQGTILASLLMALIPMVS ILVLWITKKEFPGWRTLFLVSISLVGVILVVTKGDLSIFKNQSTLLQPVFLISLSVIAWV LYTIGGAEFKNWSSLKYTTLSCLLGNVSSICAILLLQHLNISHIPSPSNLLTIKWQLLYM SVFSGVIGVLLWNIGNKLLTPKNGSLFMNLVPITTFLIEIMFGYKLTNVELIGVTMTILA IVLNNLFQRKRIT >gi|311100538|gb|AEKO01000007.1| GENE 434 411590 - 412240 230 216 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_1846 NR:ns ## KEGG: SmuNN2025_1846 # Name: not_defined # Def: putative transcriptional regulator # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 215 1 239 365 80 25.0 4e-14 MTVTIYFTESLLDNLSEINKNCFSIYSPLNEVLGSLHVLLNPDGHGLMTTWASETKQGMD EQILQELNYFSPFYKGKIPNFFIEEIIYEESSIEKQISLLGTNLLKKDKGGLINELKDFK DSKLMKDLVENSDLVFLNFFSFLKMYYKYYFRDFVQKTDVLNVLNHYATKQRKCISKQGF LRFIESIDSNQIYWVKNAIKIQTKMNKKYYLGEGEK >gi|311100538|gb|AEKO01000007.1| GENE 435 412288 - 412446 61 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNEKIILTYNVNSRNIGNLARQEMSEMFKALSDPTRIDILYYLHEGKKQLKV >gi|311100538|gb|AEKO01000007.1| GENE 436 412827 - 412973 80 48 aa, chain - ## HITS:1 COG:no KEGG:smi_1536 NR:ns ## KEGG: smi_1536 # Name: not_defined # Def: transposase # Organism: S.mitis_B6 # Pathway: not_defined # 9 48 361 400 400 67 85.0 2e-10 MLAFRHPLQLTRSPTKPHTIASIHRLIRTMYYLITHNKLYDYSLAQNR >gi|311100538|gb|AEKO01000007.1| GENE 437 413529 - 413960 199 143 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 2 137 90 229 422 137 52.0 9e-33 MVTETSIVEKNHQISNLIRQKIAQLLTEKVSLTNMARRLLVSTSTVHRKVDQFTFKEHYD KLPTVMSWDEFGFKKGEFAFVAQNYETNKLITVLDNRRQITIRNYFLKYLLKVRQKVRFI TMDMSGAYNATSSKSFPKCPNHY >gi|311100538|gb|AEKO01000007.1| GENE 438 414365 - 416629 2002 754 aa, chain - ## HITS:1 COG:PM1048_1 KEGG:ns NR:ns ## COG: PM1048_1 COG2918 # Protein_GI_number: 15602913 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Pasteurella multocida # 18 475 18 481 481 380 45.0 1e-105 MTINQLFQKLEATSPILQANFGIERESLRVNRQGKLAHTPHPSCLGARSFHPYIQTDFCE FQMELITPVAKSTTEARRFLGAITDVAGRSISKDELLWPLSMPPRIKAQEIQVAQLENEF ERHYRNYLAEKYGTKLQAISGIHYNMELGEDLVEALFKESDQTDMITFKNALYLKLAQNY LRYRWVITYLFGAAPVAEQGFFDQEVPEPVRSFRNSDHGYVNKEEIQVSFSSLEDYVSAI ENYIEQGDLIAEKEFYSAVRFRGQKVNRSFLDKGITYLEFRNFDLNPFERIGISQDTMDT VHLLLLAFLWLDAPENVDQALTQGHALNEKIALSHPLEPLPSEAETQNITTALDQLVQHF GLGDYHQGLVKQVKDAFADPSQTLAAQLLPHIKDKSLADFALDKALAYHDYDWTAHYALK GYEEMELSTQMLLFDAIQKGIHFEILDEQDQFLKLWHKDHVEYVKNGNMTSKDNYVVPLA MANKTVTKKILADAGFPVPAGDEFTSLEQGLAYYPLIKDKQIVVKPKSTNFGLGISIFQE PASLDNYQKALEIAFAEDTAVLVEEFIPGTEYRFFILDGRCEAVLLRVAANVVGDGKHTI RELVAQKNANPLRGRDHRSPLEIIELGDIEQLMLTQQGYAPDDILPEGKKVNLRRNSNIS TGGDSIDVTETMDSSYQELAAAMATSMGAWACGVDLIIPDKTQPASKEKPHCTCIELNFN PSMYMHTYCAEGPGQAITPKILDKLFPEIVAGQT >gi|311100538|gb|AEKO01000007.1| GENE 439 417265 - 419010 213 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 349 560 14 229 245 86 29 2e-15 MFQTLIAQIKEYKKPSILASLFMTLEVMFEISIPFVMANLLDKGVQQSNMSNIWLYGGLM LVCAFLSLFCGMQSARYAAFASAGFAKNLRQAIFKKVQNFSFENIDKFSAGGLVTRMMTD VTNVQNSYQMIIRICVRAPLNLIFAITASFLINGQMAWIFVGVTLFLGLVLAIITKIVYP LFTQVFEAYDNLNNSIKENITNMRVVKSYVKEQEETDKFKKASRRIYKMFMRAIRVVIIS NPAMMLSMYASFLMISWFGAHLIVGGSLTTGELTSMFSYTMTILMSLMMFMMIFVMLSIS MASVERINEVLNTDSTIVSPENGLTEVADGSISFDHVDFSYTDENGDKTHVLKDITLDIK SGEVIGILGGTGSGKSSLVQLIPRLYDVEAGQVKVADHDVKDYDLDSLRKQVAMVLQTNV LFSGTIKENMRWGNKQATDEEIIEACKIAQADEFIQEFKDGYNTKIERGGANVSGGQRQR LCIARALLMNPKILILDDSTSAVDTKTDSLIRQGFTSSLKETTKIIIGQRISSIQDSDRI VVMDDGRIDAIGTHDDLVANNAIYREVYKMQTQGKGVADAE >gi|311100538|gb|AEKO01000007.1| GENE 440 419000 - 420868 200 622 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 370 599 105 346 398 81 27 7e-14 MQNKKKASWGSLARLLRFLWQDYKLSLSISFVLIVVASLATVNLTASIQSLVDVYVQPML KSGSHDFGPLLRFLTSVGVFCLIGVVANYVASLLMATISQDSLRSLRNQLFARMQKLPVR YFDTHKHGDIMSIYTNDIDALRQAIEQSIPQLLQTAITIIGVTVTMLTVSPLLFIVVLVM VGIMFMVIKNVSSKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN EQLFQSSYLANRYANVLMPILGNLGNVSFVLTALVGGVFALNGVGGLTIGGLMAFLQLNR SFNGPITQVSQQLNFVLMALAGADRIFDLLDEAEEVDQGKVTLVNYELVDGQMVVTDKKT NHWAWKHPRPNGDYELAELVGNVVFQDVDFSYDGKKQILHDVNLYADKGQKVAFVGATGA GKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG RADATREEILEAARIANVDSFVEHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPV LILDEATSSIDSRTEKMVQEGMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGD HDTLMEQGGTYYRLYTGGLEID >gi|311100538|gb|AEKO01000007.1| GENE 441 421013 - 421234 159 73 aa, chain - ## HITS:1 COG:SP1282 KEGG:ns NR:ns ## COG: SP1282 COG0488 # Protein_GI_number: 15901142 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 7 73 434 500 519 82 62.0 2e-16 MDAVPSIADLSGGQKGKLILLHVVLESPQLLILDEPTKNFSPTSQSQVRQLFKNYPGATL TVSHDVNYLRQVC >gi|311100538|gb|AEKO01000007.1| GENE 442 421948 - 427917 6333 1989 aa, chain + ## HITS:1 COG:no KEGG:SPP_0684 NR:ns ## KEGG: SPP_0684 # Name: zmpB1 # Def: zinc metalloprotease ZmpB # Organism: S.pneumoniae_P1031 # Pathway: not_defined # 10 1989 3 1880 1880 1813 52.0 0 MKQANHVVEKVTKYAIRKLSVGVGPAAIGTFLIAGGLFVSKPVSADQVTTDSSIHLAYVT ENELTAEEQKQVVHAIPKAYQNDDTFYLVYKRKGDSQATLPKTGSSDWAATGLGLTTATL AVLLFSKKHRKKIIGLVLIGAAGQSLLIPLEVLALQNKELQAYNRNLAVSDEADLAKGVI TIDGYEYVGYLRYSSKPELEQPLENALKGLEPSREDRNTESRYEIDKEISWEKGTQEAGH EGEVLVQPSVPEYTGSISTDGTQESGHEGKSLVQPAVPEYTDSISANGTQESGHEGKSLV QPAVPEYTGSISTDGTQESGHEGKSLVQPAVPEYTGPISANGTQEAGHEGESLVQPESPE YTGPISANGTQESGHEGESLVQPESPEYTGPISANGTQEVGHEGESLVQPATPEYTGSIS ANGTQESGHEGEATVQPESPEYTDNLEAKGTQEPGNEGEALVQAENPVHTPVVGSITETE TQAIDYPIEVITDDNKYVDEEVVDQEGQKGSQEIHKVYQTIDGVKIGEPTIVSGKVIEVP QPRKIRRGSKPLDGTTTEESIVELPFKEIVQEDDTLEKGVVQVVQEGQKGQNKITKIYKT FKGSKTAEEPTVTETVLVPVQDRIVRKGTKISEKPVLTLTQVDKDDLGRSAKLSYNLTNP GSAAITTIKAVLKQDGQVVQTLDVPSTTLTADLTNLAYYKPYTLTTTMTFDRGNGEESQV LADQTIQLDLKKVELKDFARTDLIKYDNQTEVDETRLTAVPQDLTNYYLKMTSADQKTTY LAVKAIEETTVDGKAVYKVTAEADNLVQRDAQNHFAKTYSYYIEKPKASQANVYYDFAEL VNAIQANPSGEFRLGQSMSARHIVPNGKSYITTEFTGKLLSDGDKRFAIYDLEHPLFNVI NGGTIKNINFENVDINRPDQNQIATVGFNLKNKGLIEDVKVTGSVTGNNDVAGIVNKIDE DGKVENVAFIGKINSVGNNSTVGGIAGSNYMGFVNRAYVDATITANNANASMLVPFVTYM LNSWKSGTKAKVTNSVAKGVLDVKNTRNVGGIVAKTWPYGAVQDNVTYAKVIKGQEIFAS NDVNDEDGGPQIKDLFGVVGYSSAEDGTGKDTKSPKKLKHLTKEEADKRVEGYKITADTF VSEPYALNTLNNVSSQADFANIQDYKPEYNKAYKNIEKLQPFYNKDYIVYQANKLAKDHN LNTKEVLSVTPMKDSNFVTDLSAANKIIVHYADGSKDYFKLSESSEGLSNVKEYTVSDLG IKYTPNIVQKDHSSLINGIVDILKPIELQSDPIYQKLGRTGPNKVNAIKNLFLEESFDAV KANLTNLVTKLVQNEDHQLNQSSAAQQMILDKVEKNKAALLLGLTYLNRYYGVKFDDINI KEIMLFKPDFYGKNVDVLDRLIEIGSKENNISGSRTYDAFGEVLAKYTKFGDLNDFLNYN RKLFTTIDNMNDWFIDATKDKVYVVEKASQNEGVGEHKYRAYDNLTRGLHRKMILPLLNL DKTEMFLISTYDTMSYGTANKYNTTLEKLKPEIDLAAQRQINYLDFWQRLAADNVKNKLF KDIVNPIWEGFYVWGHGWPGWPERYGQFKNSTEVYAPIREIYGPVGEYYGDNGALAGAYA AIYDNPYDNRAKVTYVMSNMISEYGASAFTHETTHLNDRIAYFGGFGRREGTDVEAYAQG MLQSPATQGHQGEYGALGLNMAFERENDGNQWYNTNPNKLNSREAIDRYMKGYNDTLMLL DSLEGEAVLSQGNQDLNNAWFKKVDKQLRGNSKNQYDQVRSLSDSEKAINLTSIDDLVDN NFMTNRGPGNGVYKPDDFSSAYVNVPMMSAIYGGNTSEGSPGAMSFKHNTFRLWGYYGYE KGFLGYATNKYKQEAKAAGKATLGDDFIISKISDGQFNSLEAFKKAYFKEVKDKASHGLT TVAIDGTTVSSYDDLLALFKAAVAKDAATIKTDNKGNKSVSTSHTTKLKEAVYKKLLQET DSFTSSIFK >gi|311100538|gb|AEKO01000007.1| GENE 443 428724 - 428867 65 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKISSLNQFMYVIFLFRFMVQIFISKKLDIGVKGIIYLNIVIMISKS >gi|311100538|gb|AEKO01000007.1| GENE 444 428891 - 429886 724 331 aa, chain - ## HITS:1 COG:SP1854 KEGG:ns NR:ns ## COG: SP1854 COG1609 # Protein_GI_number: 15901682 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 330 1 331 335 420 63.0 1e-117 MATLTDIANLAGVSISTVSRVLNKDETLSVTEDTRHRILTIADEIGYTKHKTINNSKKEK YQVAIIQWVSEEHELDDIYYYNIRLGIEKRAYELDYEMLRFFNDIPSSLGEEVVGVLCIG KFSREQIAKLERLKKTLVFVDSDTLNQGHPCVTTDFENSVQSALCYLKEQGCNNIGLLIG QEKTTDATEIISDPRLRSYRNYCMEKGIYDPLFILTGDFTVQSGYELLASKIKSGATLPD AYFAASDSLAIGALRALQENGIKVPDDIQIISFNDTTLAKQVYPPLSSVTVYTEEMGRTA MDILNKQFLAPRKIPTLTKLGTKLTLRNSTK >gi|311100538|gb|AEKO01000007.1| GENE 445 430026 - 431192 1342 388 aa, chain + ## HITS:1 COG:SP1853 KEGG:ns NR:ns ## COG: SP1853 COG0153 # Protein_GI_number: 15901681 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Streptococcus pneumoniae TIGR4 # 1 388 5 392 392 657 85.0 0 MKTSQLREKFKEVFGVEADHTFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDD KVLRFFSGNFEEKGIIEVPLENLRFEKEHNWTNYPKGVLHFLQEAGHTIDSGMDIYIYGN IPNGSGLSSSSSLELLIGVIAEKLFDLKLERLDLVKIGKQTENDFIGVNSGIMDQFAIGM GADQRAIYLDTNTLEYDLVPLDLKDNVLVIMNTNKRRELADSKYNERRAECETAVSELQE KLDIQTLGELDLWTFDAYSYLIKDENRIKRARHAVLENQRTLQARKALEAGDLEGFGRLM NASHVSLEHDYEVTGLELDTLAHIAWEQEGVLGARMTGAGFGGCAIALVNKDKVEDFKKA VGQRYEEVIGYAPSFYIAEVAGGSRVLD >gi|311100538|gb|AEKO01000007.1| GENE 446 431212 - 432693 1440 493 aa, chain + ## HITS:1 COG:SP1852 KEGG:ns NR:ns ## COG: SP1852 COG4468 # Protein_GI_number: 15901680 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 5 486 3 485 493 669 66.0 0 MAENLVNTFVTLVIENSDYEELDRIYLTNKVFTLVGEGVADVETDSSELIDLKDQLLQAG VKAGSVGELNEEQDIIGAQLMDLITPRPSVVNRNFWGTYKSNPEQAIADFYAQSKRNDYV KVKAIAQNIAYKAPTKYGDLEITINLSKPEKDPKAIAAAKNAVASDYPKCQLCMENEGYL GRINHPARSNHRVVRFQMEDKEWGFQYSPYAYFNEHSIFFYGKHEPMHISPLTFGRLLTI VEAFPGYFAGSNADLPIVGGSILTHEHYQGGRHTFPMEVAGIKEKVSFDGYSDVEAGIVN WPMSVLRLRSEDKERLIALATKILNCWRGYSDEKAGVLAESDGQPHHTITPIARRKDGKF ELDLVLRDNQTSEEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKTELKDVEDYV LGQGNQVAPIHQEWADELKAQNPNVTAEEVTEVVRQSVADIFARVLEDAGVYKTNSEGLD QFKAFVYFVNLAD >gi|311100538|gb|AEKO01000007.1| GENE 447 432723 - 433724 1247 333 aa, chain + ## HITS:1 COG:lin2620 KEGG:ns NR:ns ## COG: lin2620 COG1087 # Protein_GI_number: 16801682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Listeria innocua # 1 329 2 328 328 433 64.0 1e-121 MAILVLGGAGYIGSHMVDRLVEAGQEKVVVVDNLVTGHRAAVHPDAVFYEGDLADQEFMR KVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLIEVMNECDVKYIVFSSTA ATYGIPEEIPILETTPQKPINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGAKPDG SIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHLLAVE YLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDTLIASSEKART VLGWKPQFDNIEKIIASAWAWHSSHPKGYDDRG >gi|311100538|gb|AEKO01000007.1| GENE 448 433794 - 434840 314 348 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 7 334 8 333 345 125 27 4e-27 MKISCEIIGKVDSGDVSKISMENNNGVVISTLTTGATLQEFLVPTETGALKNIVLGFSDY EDYYKNNLCACQSIGRVAGRIGKASYTHNMVLYSLPKNEGENCLHGGPKGMQVQNWNYVT NLNDEYVETKFIRRLYSSVDGFPGDVTVSISYRLNNNNRLTILFEAFDVTESTVFNPTNH VYFNLSDKQDLSSHELQIYSDYRLELDSELIPTGQKINVDGTNYDFRKTTDLLPRIEANN GFDDAFVVGGETCDHVKEVAILHDKESGDGIEIFSNRNGLVIFTMDDIEDNIYFARDKGK MAKGREAIAMEAQTLPDAINHKGFGDIILDKGHSVNYEIGFQYFNSSK >gi|311100538|gb|AEKO01000007.1| GENE 449 434943 - 436847 1838 634 aa, chain + ## HITS:1 COG:STM4299 KEGG:ns NR:ns ## COG: STM4299 COG2211 # Protein_GI_number: 16767549 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 8 420 5 406 476 151 25.0 4e-36 MGKSKGQMKSRLSYTAGAFGNDVFYATLSTYFIMFVTTHLFNTGDPKQNSHYVLLITNII AILRILEVFIDPLIGNMIDNTHTKYGKFKPWVVGGGIISSIALLLLFTDLGGLNKTNPFL YLVLFGIIYLVMDVFYSIKDIGFWSMIPALSLDSHEREKMATFARIGSTIGANIVGVAIM PIVLFFSMTNSSGSGDKSGWFWFAFIVALIGVITSIAVGVGTREVESKLRDNKEKTSLKQ VFKVLGKNDQLMWLSLGYWFYGLGINTLNALQLYYFTFILGDSGKYSILYGLNTVVGLVS VSLFPSLAGKFNRKRLFYGCIAVMLGGIGIFSIAGTSLPIILTAAELFFIPQPLVFLVIL MIISDSVEYGQWKLGHRDESLTLSVRPLVDKLGGAMSNWLVSTIAVAAGMTTGASASTIT THQQSIFKLSMFGFPAAAMLIGAFIIARKITLTEARHAEIVEELEHRFSAATSENEVSAN IVSLVNPTTGKLVDLSSVSDKHFASGSLGKGFAIKPSDGKVFAPISGTVRQILPTRHAIG IESDDGVVVLVHIGIGTVKLKGEGFISYVEQGDRVEVGQKLLEFWSPIIEQNGLDDTVLV TVTNSEKFSAFHLEQTVGEEVKALSEVVTFKKGE >gi|311100538|gb|AEKO01000007.1| GENE 450 436850 - 439867 2432 1005 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 1 1001 1 1011 1014 968 49.0 0 MKTTEKIQTYLNDPTIVNVNTVSAHSDHKYFESLAEFSEGEMKLRQSLNGKWKIHYAQNT NQVLKDFYKTEFDESDLDFINVPGHLELQGFGSPQYVNTQYPWDGKEFLRPPQVPQESNA VASYVKHFTLNEALKDKKVFISFQGVATSIFVWVNGNFVGYSEDSFTPSEFEISDYLVEG DNKLAVAVYRYSTASWLEDQDFWRLYGIFRDVYLYAIPRVHVQDLFVKADYDYQTKIGQL DIDLKTVGDYEDKKIKYVLSHHEGIVTEGDESVNGDGELSVSLEDLQIKPWSADSPKLYN LTLHVLDDEQVVEVVPVKVGFRHFEIKDKLMLLNGKRIVFKGVNRHEFNARTGRCITEED MLWDIKVMKQHNINAVRTSHYPNQTRWYELCDEYGLYVIDEANLETHGTWQKLGLSDPSW NIPASEPEWLPACLDRADNMFQRDKNHASVIIWSCGNESYAGKDIADMADYFRSVDNTRP VHYEGVTWCREFDYITDIESRMYAKPADIEEYLTNNPQKPYISCEYMHTMGNSGGGLKLY TDLEKYPEYQGGFIWDFIDQAIYKPLPNGSEFLSYGGDWHDRPSDYEFCGNGIVFADRTL TPKLQTVKHLYSNIKITVDEKSVTIKNDNVFEDLSAYTFLARVYEDGRKVSESEYHFDVK PGEEATFPVEFAVGSSNAERIYEVACIQKEATEWAPKGYEIVRGQYVAEKISTETPVKSP LNVVEGDFNIGIQGQNFSILLSRAQNTLVSAKYNGVEFIEKGPKLNFTRAYTDNDRGAGY PFEMAGWKVAGNYSKVTDTQIQIEDDSVKVTYVHDLPGLSDVEVKVTYQVDYKGRIFVTA NYDGKAGLPNFPEFGLEFAIGSQFTNLSYYGYGAEESYLDKLSGAYLGRYETSVEKTFAP YLMPQESGNHYGTREFTVSDDNHNGLKFTALNKAFEFSALRNSTEQIENARHQYELQQSD ATWIKVLAAQMGVGGDDSWGAPVHDEFLLSSADSYQLSFMIEPLN >gi|311100538|gb|AEKO01000007.1| GENE 451 440700 - 441926 831 408 aa, chain + ## HITS:1 COG:L0327 KEGG:ns NR:ns ## COG: L0327 COG0420 # Protein_GI_number: 15673304 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Lactococcus lactis # 7 403 1 386 390 351 48.0 1e-96 MNEEAVMKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVIIAGDLYDRAV PPVDAIKLFNKTLARLVLEEQIPVYAISGNHDGAERLHFGRDFFQHQGLHLSTRLEEAFE PIELENCQIFLLPFIDPIDARIYYKDDEGKKIQGIGDALTYILEDMEKAFDPDKAHVLVT HFAVSKKDDSDGQGLRELMLSETSNTVGGLSNVTSDLFKVFDYVALGHIHTRFASPTQRV QYSGSPVAFNIKEAKRKEEKGVYIVELDASGNLSQTFHSLEVRRPIVTLQEPFETLMSPE FYKEQPCQKAWFAFDIQLSSRKELEGINVRARLEEIYGIDIVEITFSRLGDVREENLTVD QHLKYLEMQSPQEIVSDFYQTVTGGDVLSERQTALVESIFEEIGRSGQ >gi|311100538|gb|AEKO01000007.1| GENE 452 441923 - 445102 2776 1059 aa, chain + ## HITS:1 COG:L152588 KEGG:ns NR:ns ## COG: L152588 COG0419 # Protein_GI_number: 15673303 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Lactococcus lactis # 1 1058 1 1046 1046 417 32.0 1e-116 MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN VEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIERVLQQERAKRDGGTTIQKATASLVIVDK IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI FGTGIFDHFQKSLEERFRQSNKDMEKRQAQLDGHFASQVWSEEELAVLEQTPASEKLTRL EEFLIQRQENVTKQKIILKDAHEDLAKLQKSLQTAQDLAKIFQEVEQAKERYRLEIEEGA QGQAEAKVHLEELQFAQGLQETISSLKQYQKQLIQLEQDLEIAQEVLSERRQAFEDVKAQ KEELAVQSEDFLQKEEKLGAWKEDIIYAQSLAQEQEKIKGSTTNYKQLEETYQQARKEIE ILNKSLSDLEVNRLSLDSLHEAEKLLQSVGYSVENQLAQDLNEIESLNEDLIKTEKRRQT LSFDIDQAQESLKELEEKLRTTLASRRQLMIAQLQAELEEGQPCMVCGALEHPNVGGAQA DEVALKNLMDQVEKLQVQKEKQVATVSNRQATLSEVESKRQDLLDQVTKVKVTLEKHYQE LEEQVKGRFEFDFSEHYEADRGQALLLKVKKYYQKLQKRFDKEEDDCVRYQDEIGKAQEK LTKSAKTYQEAKAVLEQSKERLRDLQEAHPELESVEVYQNRIAHAKQELALYEKQVKENG EVYNQLHADIREIKGQLESITKSKEKLEQDVKRLSAELEQSIKAEGALTNDLEQVELWLL EVNNQAIPMLQAKLTTYATLKQELQAQICKGQELLQNKEQPDLDSLAQEVQACQENYDKQ LAQVSVMKKGLKDATATYQAAKTLQDSNLDAFKVHQELSDLVKVVKGENTALTGRLNLEV YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK SLSGGETFIAALAIALSLSEVVQNTSKGAVIEALFIDEGFGSLDKEALTKAIAVLEQIGE NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSRIKIVDKG >gi|311100538|gb|AEKO01000007.1| GENE 453 445424 - 447517 1845 697 aa, chain + ## HITS:1 COG:SP1771_2 KEGG:ns NR:ns ## COG: SP1771_2 COG1442 # Protein_GI_number: 15901601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 258 694 1 437 437 451 51.0 1e-126 MTEKISVIIPVYNVENQLQTCLDSVLGQTYQNIEIILINYGSIDNSDDICRSYAARDSRI LYFKKNNGGLSDARHIGIRQAKGAYVTYVDAEDWVESTYLEELYKALQVHKADIAVANYS VYKESEDLFYVYIKDEDYYEQVYSPAQIIDGLFEESNNINIALISATGKLYKRSLFNDLL FPKEHAGEDGFFNLKAYLMSDRTVYLNKGLYVYRESPEMPPATWMQDWMMTLVYAMEERL AIVASHGFPLEKYMVTYRQMLEACLKNVEEQGLTDSEAYRSIQEKFQVLSLAPQRYETKK HAIVLAANYAYVDQVLTTIKSIVFHHRNIRFYLINDDFSQEWFRGLNRHLAAFGSEVINC RVDSSHIKQYKTNGNYASYLRYFVTDFVSEERALYLDSDMVVTGSLEDLFTLDLQGRPLA AVRDYAIQVQNRQKMFDASFMVIDMAYWKQFNMRCHLIDMTSEWHDKVPFAEQSILNMVF RNNWLALSFDNNYAVTKSSLAGYHLPNGQDYPKVLHYDSHRKPWLPLACQAYREVWWFYA QMDWSEVAGNASLLPLSEDMVYPKGRPFTCLVYTNISEIPHLTDLISALPKVQFKIASRQ HVSDKLAQLITYPNVTVYSDIAGLNGLDLELVRTSDLLLDINPGRKVVEILDAFRFENKP ILGFEDLKSTKHNQQTYSRDRWKEMAETIRQMRKKSL >gi|311100538|gb|AEKO01000007.1| GENE 454 447612 - 448838 347 408 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 9 362 23 396 447 138 26 6e-31 MKKIGQSIITKRVLWTVFFLFIYCLGNRLVLPFVDLKNATIFGGAMGSLGFSSAMMGGNL SSVSLFSVGLSPWMSAMILWQMFSFSKKMGLKNLPVEIQERRRMYLTLAIALVQSLAVSL NLPIVSGVNGGLAVFMNTILLISGTFFLVWLSDLNSLFGIGGSIVILMASMMANLPYQIM DSIEKLGIGWDVLLPLILFSLIFLYVSGIVQRARYRIPINKINIHNRFKQYSYLDIMLNP AGGMPFMYAMSLVSIPQYVFMLIQFMHPENKWASEATKSLTVGQPLWLVVYLIMLFVLGL AFAFVNVSGEQISERMRKSGEYIYGVYPGQETSDYINHLVLRFGFIGALYMLFMAGTPML IILVNPDYLQLSMIPGTFLIFSGMIYNVNEEMKALKLNTSYTPLFENV >gi|311100538|gb|AEKO01000007.1| GENE 455 448939 - 450510 1315 523 aa, chain + ## HITS:1 COG:no KEGG:SGO_0971 NR:ns ## KEGG: SGO_0971 # Name: asp1 # Def: accessory secretory protein # Organism: S.gordonii # Pathway: not_defined # 1 520 1 524 526 471 48.0 1e-131 MYYFIPAWYGQTDEFWKTAIDPWYRIRQKIEFDDSLHQVRIFQDEDLAPQLLLLAYQPHL RYFLHRHDVLEVGYTAIFDLIQGITDEEMRNLQVTDLEWPEGSTFVYTPFAIVVQCQHQR YAEVEFGSEGFIGMIRYFKDDQIIREDVYDDRGFISSSLYYEEGQPIYRNYLNAKGVWQL CHFFDGRGIVANPRTDGRFEKSYYGDLSEVIWEFLNKFLAEEVEVSDRFVIASDLRHNKQ LFEHLPTENTKILTWFAERNQEDKVNAYAAFLPQVDLMIADRYDYVEQLQVVYPKEAKKL KHMASFDTRLALGTSQRVKESKIFYQLDFDQLDLEAIYQVLAFVAKYPKTKVEFGAFNAN PEQLGSLQNQVEKMIEERLSPEAFEEVVESSGAENKLEENKEIISRFSFQDLRDETALIK SLQFTRLIVDLSKEPNRYTQIAGISAGIPQINRVASEYVTHQENGYILKHLSDFEKAAYY YLGQLNNWNRSLIYSIEKIKENTGDRLVQKWENWLKEKQDDQE >gi|311100538|gb|AEKO01000007.1| GENE 456 450497 - 452035 1299 512 aa, chain + ## HITS:1 COG:no KEGG:SSA_0834 NR:ns ## KEGG: SSA_0834 # Name: not_defined # Def: accessory secretory protein Asp2, putative # Organism: S.sanguinis # Pathway: not_defined # 5 512 3 509 509 612 56.0 1e-174 MTKNNRLKILQVGSSNWSENQEIPENMKWYYCNLGQLETLQETIEEDEIKAFTAVIVDSL EGLEELMVIKEYLIPHTIFFDQTIEVTDERLAQFIKEVCAVPTDFSNQGQLLFTLSKALF SGQYGDKMFPFTTQVNPNFSGEVTYHGYENVILNGDYGQEFTPVLDWTYNVRASKENPIE LWLEFEKEDTCECRLILNLLPEGSVAGIFKTYIISEEEMRKEAIVLDEDRIFLLSASLEM KGRGQITIGGLHQRLTRFQFGKFVLGGGILHDRKHQEINYFFYPGDFKPPLSVYFSGFRP AEGFEGFGMMKAMGTPFLLFSDPRLQGGAFYIGTEELENSIKDTIQHYLAYLGFDNSQLI LSGMSMGTFPSMYYGADFEPHAIIMSKPLANVGTIGNRARLLAPEVFPTGIDVLHLQTGR LDNEGVEALNQKFWNKFEKADFANTTFGLSYMKDEDMDPTAYEDITKSLYYSGAKILSKG TSGRHNDDSYTATTWFVNFYRMILENDFGRKE >gi|311100538|gb|AEKO01000007.1| GENE 457 452038 - 452484 450 148 aa, chain + ## HITS:1 COG:no KEGG:SGO_0973 NR:ns ## KEGG: SGO_0973 # Name: asp3 # Def: accessory secretory protein # Organism: S.gordonii # Pathway: not_defined # 18 147 15 144 146 131 48.0 8e-30 MFRNKKSEILWGLNHKAYMYGSKIVKRQDGSVQFYNPLVPSGTEIQSWMAIQNYQAGRTQ PALPLLKKGHSYDLTANLEAVPTGSVFLKVSFLDRYDNEIKQLIEKSTQMTFVYPHEAYT YRISLLSAGVKELDFYSLKLEETGEENV >gi|311100538|gb|AEKO01000007.1| GENE 458 452477 - 454852 2394 791 aa, chain + ## HITS:1 COG:SP1759 KEGG:ns NR:ns ## COG: SP1759 COG0653 # Protein_GI_number: 15901590 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Streptococcus pneumoniae TIGR4 # 1 791 1 790 790 1079 69.0 0 MFKQLNPILSVKEILKEINGRADEMAGLTNLELKNKTQEFKERLAQGESLDDLLPEAFAV VREADKRVLGMFPYDVQVMGGIVMHQGHIAEMNTGEGKTLTATMPVYLNALSGEGAILVT INEYLAIRDAEEMGQVYEFLGLTIGVPCVEGSNEMDPAEKRAIYQSDIVYTTNASLGFDY LIDNLASNQDGKYMRPFNYAIVDEVDSVLLDSAQTPLIISGAPRVQSNYYGMMDTLMTTL VEGEDYIFKEEKGEVWLTTKGAKAAENYLGIGNLYDEVNSTFARHLLFSLRAHLLYKKDK DYIIRDGKKGPEVVLLDKSTGRLLELTKLQGGLHQAIEAKELVALSQETRAMASITYQSL FKKFKKISGMTGTGKVAEKEFLDTYGMKVIQIPTNRKKQRIDYPDKIYETLPEKVFASLE YVKHYHEKGNPILIFVSSVEMSELYSSLLLREGIAHNLLNANNAPREAEMIVESGQMGAV TVATSMAGRGTDIKLGKGVAELGGLVVIGTERMESQRIDLQIRGRSGRQGDPGMSKFFVS LEDDVIKKYGPSWVHRTYKEYAINDHIEPKELTGRKYRKLVEKAQEASESSDRTSRRQTL EFAESMNIQREMIYAQRDRLIYHNQGLDTVIDEVLDDFIDQAMTEEDFSKAENLYHFILR NISFRINEIPKDLDLNNREQVLELIYQFAYRELDTKKQELKTKELNEYFQRLSILKAVDD NWVEQVDYLQQLQMAIGSQQLSQKNPIVEYYQEAYKGFEAMKRQIRKDMVRNLLLSQVQV TKKGDIISHFP >gi|311100538|gb|AEKO01000007.1| GENE 459 454865 - 456373 1593 502 aa, chain + ## HITS:1 COG:SP1758 KEGG:ns NR:ns ## COG: SP1758 COG0438 # Protein_GI_number: 15901589 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 500 1 500 503 632 60.0 0 MTVYNINLGIGWASSGVEYAQAYRAKIFKEMGQEAKFVFMDLILGDNIEHMTSKIDFSDD EIIWLHSYFTDVKIAPSTISLAEIEAILPTDPERKEVAGRLIRYHYPQDDMVVACNLRAT DEGAVETVSYFVNDKLLRKDFYSYTRYCSEYSAPKDNQAKVYQRRFYNEDGSTAYDMIVG DNNQDIYRFPDQVLYGKQEFLRYFFKRLALTKDDVVILDRETGIGQLVFEEAQAARLGVV VHAEHFSVNQTDDNYILWNNYYEYQFTNADKVDFFIVATDRQREILQEQFRHYTNHDPKI YTIPVGSLTKLVGQNKTRKPFSMITASRLAQEKHIDWLVRAVIEVHKTLPDITFDIYGSG SMDAKLREIIVEGQAGEYIRLMGHADLTDIYSQYEVYLTASTSEGFGLTLMEAVGSGLPM IGFDVPYGNQTFIQDGVNGYLLPVAENHVVDVITKSYKDAIVRLYEEGNIEAMRQKSYDF AKGFLTSQVKAAWKQLLEEVRS >gi|311100538|gb|AEKO01000007.1| GENE 460 456370 - 457722 1137 450 aa, chain + ## HITS:1 COG:SP1767 KEGG:ns NR:ns ## COG: SP1767 COG1442 # Protein_GI_number: 15901598 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 292 388 281 377 814 79 41.0 2e-14 MIFLCDYYNQASKDLAYSLQAAGYDATTVVINPDGFLPQGALSPFTYYVEAVEEIGKPRF FNQVPVPAFWEISGNNQMARVSNLAEERARITYPEGSKARIVKSVQWLDKSGKIRQVDHY NKYGFCFAKTTHDENGQALFTSYQTKEGDERILENHLTSDILLTLPGQALRRFANRTEFI KDFLAQFFGEIEHIIFNSLATPFIVSWTMENTGATDILVWQEPIGDILPGNMNGILEDNS ARANAIIIPDKVTYEKALTLVPEDKKHKVLSLGYAYDFKENHGKPRNAFIATNSDQIERL EDLIESLPDVTFQIAAVTEMSPRLLSMMRYSNVVLHPNASHKQLDKLYQESDLYLDINHY NELYKAIRTAFEHQLLILAFSETAHGRVYTAPEHIYASQDYPAMVAKIKQVLGGSQAMQE AIQAQKAQANTLPASELVDRLQSLLGGNHV >gi|311100538|gb|AEKO01000007.1| GENE 461 457715 - 457894 123 59 aa, chain + ## HITS:1 COG:no KEGG:SGO_0977 NR:ns ## KEGG: SGO_0977 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 59 1 59 60 65 64.0 6e-10 MSKKDLFYGDVEGRMEELRQKPIIKEKETRGEKINKSFSIMLGLVIIIGLIFTLIGLLR >gi|311100538|gb|AEKO01000007.1| GENE 462 457899 - 458123 283 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228476416|ref|ZP_04061109.1| ## NR: gi|228476416|ref|ZP_04061109.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 74 1 74 74 80 98.0 2e-14 MMLVFMVLAVILSVFLIVLVTIQPRQTQIFSTDATSNIGKPSYWASQPIRKMLTLAISIA LFILLLIFMIVSYK >gi|311100538|gb|AEKO01000007.1| GENE 463 458159 - 459160 1003 333 aa, chain + ## HITS:1 COG:no KEGG:SSA_0831 NR:ns ## KEGG: SSA_0831 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 330 1 330 334 402 55.0 1e-110 MRVHFTNLFGQSSRSVALIAQNDTMKIVKDLGANELGIYFYDSSQEPAGELNARLDGVVA GVSVGDIVFFQSPSWNGSEWDSRLLSKFKAVNAKTVMFIHDVPPLMFDSNYYLMSSYIDM YNLCDVIVVPSEKMRDRLIEEGLTVEKIIIQKLWDLPHSLDLHQPSFQKKMIFAGNPTRF PHVLDWKQTTPLHVYADKQEDKDYSKVHLEGWRNKHELLLELSKGGFGLVWGNSERPEDE PDYYKLNISYKLSTYLAAGLPVVVPNYLSNADYIKEHGLGFVVSSLEEADRCVQECTKEQ YAQMVANAKYTAYLISRGYFTKKLFIDAIMALS >gi|311100538|gb|AEKO01000007.1| GENE 464 459682 - 466563 12337 2293 aa, chain + ## HITS:1 COG:no KEGG:SGO_0966 NR:ns ## KEGG: SGO_0966 # Name: hsa # Def: streptococcal hemagglutinin # Organism: S.gordonii # Pathway: not_defined # 13 153 1 137 2178 67 43.0 7e-09 MECFIQRINGEDMFFRRNEGQYRETERVTRFKLVKSGKHWLRAATSNFGLFKVLRGGVDT PSLNTQQVEMNEHAFSGQTLLKGVLATGAILGGTVATHVTYADEVTDQPILESEAGARAD LLATSDSVVLGNVGSVISAQESQVNSQESSETVSSQNSEASLNESLSRSQSMSVSELTSK STSLSLSLSLSASLSDSLVSKSESASQTDSSSRSLSESMLSGSLKNSSSESVQSVSKSDS SDSKDGVNLVSSESALLNASLTSEVLSNPQLSDATTGMLAASVVADAERLEQEKHLKDLA LDIYTYKAQAVDLPNTDAAILKGDKVLDAIRVSLADRDSDVTPTIAQARQARNSLANAVL RATSGQRDPRNGSRIDANSNLRAPQYKLGPANNALISVYNSDSINQAYNVVETIPTRNNI KSIGYASGSDRVNGIIVPQTSALKNSAVAFNIFGTVGATEVVTPGKIYNLSFVVTNTARQ SVTRTLRIQVLPQNDGIRNPITAVTTGTFVNDTSNLAQAEKDKVWEAFKASNPNISTSKD FKEYSVSASGVVTITYKDNTTNDVTAPVKRLAAPTVETRLLDKAYTQTPVTVTGAEPGST VVLYNNDDEVGIAVADASGQAIVTPTVKLQTGGVTAKGRIMYGDYAVYSDASNSVAVTDG TRPEVTAKLTVNGVEPKSTPLEGGGKNYTIYAGDDAVLTFTATDDSGKLKELKVVARADL NDNTLNGNFFGGSQYGTGNIAPITGDITATTDNPATLTTTIHLKDDLYHSFRNTWQRNVA AIDNASNMNRPNGLGEIRITQGRLADRTPGVAPTSIIQVTSLTALTDSDKSKIIAAVSAL NPEVANRIKSYTVNSNGTVTITYKDSTTNVVAVRLSDSDYSQSVSQSTSQSKQESISQSQ SESVKQSASTSLSLSTVASKSVSSSLSESLKTSVSQSQSVSTSASLSAEKSQSVSSSLST SLKTSISQSESTSESASISESASTSASESASTSASESASTSASESASTSASESASTSESI SKSQSVSNSESASVSESVSESQSVSNSESASVSASNSESQSVSNLESASVSESISESQSV SNSDSASESESVSESQSLSNSESASVSASVSESQSVSNSESASISASESASTSASESASI SASESASTSASESASTSASDSASTSASESASTSASESASVSASNSESQSLSNSESASESA SVSTSQSVSNSDYDSLSASISESQSVSNSESASVSASESASESDSVSESQSLSNSESAST SESISESQSVSNSESASESDSVSESQSVSNSDSASESALISESQSVSNSESASTSASVST SQSLSNSESASVSESVSESQSVSNSESASISASESVSTSASESASTSASISESQSVSNSE SASESDSVSTSQSVSNSESASTSASVSTSQSVSNSESASVSESISDSQSVSNSESSSESE SISESQSLSNSESASVSVSILESQSVSNSESASTSVSISESQSVSNSESSSESESVSESQ SVSNSESSSESASISESQSVSNSESASTSESISESQSLSNSESASTSASISESQSVSNSE SSSESASISESQSVSNSESASESASISESQSLSNSESASESASVSTSQSVSNSESASVSE SVSESQSVSNSESASVSASESASESDSVSESQSLSNSESASTSESISESQSVSNSESASE SDSVSESQSLSNSESASVSASISESQSVSNSDSASVSESISESQSLSNSESASESESVSE SQSLSNSESASVSVSISESQSVSNSESASLSASISESQSVSNSESASESESISESQSVSN SESASESASISESQSVSNSVSASLSASISESQSVSNSESASESESVSESQSLSNSESASE SASISESQSVSDSESASVSESISESQLVSNSESASESDSVSESQSLSNSESASTSESISE SQSVSNSESASESDSVSESQSVSNSDSASESDSVSESQSLSNSESASVSVSISESQSLSN SESASESESISKSQSVSNSDLASESDSVSESQSVSNSVSASESASISESQSVSNSESAST SESIFKSQSVSNSESASVSVSNSESQSVSNSESASTSASISESQSVSNSESASTSESISE SQSVSNSMSASESESISESQLVSNSESASTSVSISESQSVSNSESASISASESASTSASE SASTSASESASTSASESASVSESISESQLVSNSESASLSASISESQSVSNSESSPESESI SESQSVSNSESASTSASESSSEVKDPKQKRGSHALPKTGEENSSLSMIFGALATATGLAF LAKRKKDEEREDY >gi|311100538|gb|AEKO01000007.1| GENE 465 466620 - 466790 139 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLDNNLAMRCFLFGNVEVVDISYCMSHAPKAVKKVAIYVADNFVDAVTHLENLLDL >gi|311100538|gb|AEKO01000007.1| GENE 466 467225 - 467788 631 187 aa, chain + ## HITS:1 COG:SP0074 KEGG:ns NR:ns ## COG: SP0074 COG0110 # Protein_GI_number: 15900019 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 1 185 1 185 185 313 80.0 1e-85 MPTEYEKMIEGEFYKPSDPELRTLAAKSREKQMAFNAEPNCLKRAEIVKSWFGSTGENVA MNPQFVTDYGVNIHIGENFYSNWNLTMLDICPITIGDNAMIGPNCQFLTPLHPLDPTERN SGIEYGAPITIGDNFWAGGGVTILPGVTLGDNVVAGAGAVVTKSFGDNVVLGGNPARIIK EIPVKKD >gi|311100538|gb|AEKO01000007.1| GENE 467 467982 - 468365 361 127 aa, chain + ## HITS:1 COG:L182006 KEGG:ns NR:ns ## COG: L182006 COG1846 # Protein_GI_number: 15673522 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 1 108 19 130 148 79 47.0 1e-15 MLRHFDQFAQQYDLTGNQMAIIDFITNHAKYEVFQRDIEHEFEIQRSTTTVLLQRMEKKD LIERFTSLKDARQKAVALTEKAVKIASACQSYLRKEEEEFVQQFSAEERSFSKYYNTIVI FKFIKEE >gi|311100538|gb|AEKO01000007.1| GENE 468 468372 - 469757 1344 461 aa, chain + ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 10 459 9 449 454 266 40.0 8e-71 MSEEKISTKVLSAIFATGILSFCGVAGETAMNITFPILMKEFSVTTSTVQWVTTIYLLVV ACVVPLSAYLKRSFKMKSIFLIANLLSVLGVLIDFIAPDFGFVVLGRLVQGLGVGFALPL MFNIILERIPSRKIGLMMGVGTLITAVAPAIGPTVGGLLTTHFGWRSIFLVQFPILLASL IAGLRSIEQKSEVKRESLDILSLLAIIFLFLGLILGLHGIADHAFFSFSVLGWLLIGTLG LGILIRRSIKLDNPIINLSILKNRKLTGHIIAFFSFQLGSLAMSFLLPNYVQLVNHSNTT LAALMILPGALIGAGFAPFSGIILDKMGARKPILIGAILIVLAQLLFSVFGLSLSNTLIL VFYMIFMTGLGVAFGNVMTNGQKQLPLDQRADANAIFNTLQQFAGAVGTTLASLIVALSQ TNHKIDFAQATAQGSQNGFRVLLVLAVLQLIVLVNVVKKND >gi|311100538|gb|AEKO01000007.1| GENE 469 469917 - 470180 238 87 aa, chain + ## HITS:1 COG:no KEGG:SSA_1740 NR:ns ## KEGG: SSA_1740 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 70 11 80 261 81 55.0 1e-14 MSLLKKICPEQPLKNLRWFDIGIITIIMFGQFIVRSPQMYMASLSPTIYTTISETATNTA SEGAAYSSELTGYSLSLSDYLSLDTSF >gi|311100538|gb|AEKO01000007.1| GENE 470 470587 - 470820 272 77 aa, chain + ## HITS:1 COG:SP1467 KEGG:ns NR:ns ## COG: SP1467 COG0311 # Protein_GI_number: 15901317 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 2 71 124 191 193 80 57.0 9e-16 MECFEKGIGDSPIVFIHAPIIETIGPEVEILAQVNVAIVAAKEKHMLVTSFHSELTGDTR AHAYFLEMISQSKKEKL >gi|311100538|gb|AEKO01000007.1| GENE 471 471224 - 472096 1039 290 aa, chain + ## HITS:1 COG:SP1468 KEGG:ns NR:ns ## COG: SP1468 COG0214 # Protein_GI_number: 15901318 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 3 290 4 291 291 459 89.0 1e-129 MTNRYDLNKNLAQMLKGGVIMDVQNPEQARIAEAAGAAAVMALERIPADIRAVGGVSRMS DPKMIKEIQAAVSIPVMAKVRIGHFVEAQILQAIEIDYIDESEVLTPADDLIHVDKTKFD VPFVCGAKDLGEALRRISEGASMIRTKGEPGTGDIVQAVHHLRLMNQEICRIQNLREDEL YITAKDLQVPIDLVRYVHEHGKLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSG DPKKRAEAIVKAVTNFDRPDILAQVSEDLGEAMVGINKDEIEILMAERGK >gi|311100538|gb|AEKO01000007.1| GENE 472 472097 - 472705 497 202 aa, chain + ## HITS:1 COG:SP1467 KEGG:ns NR:ns ## COG: SP1467 COG0311 # Protein_GI_number: 15901317 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 3 191 2 191 193 241 64.0 7e-64 MTKIGILALQGAFAEHEQVLKALDVETVQIRNQQDWETHADLDGLILPGGESTVMGKLLH DLDLFEPIKTKINAGLPVFGTCAGLILLAKTIVGDQTKHLASMDINVARNAYGRQLGSFV TNADFKGIGEIPMVFIRGPIIETIGPEVEILAQVNGAIVAAKEKHMLVTSFHPELTGDTR VHTYFLEMISQSKKRKALIQIS >gi|311100538|gb|AEKO01000007.1| GENE 473 473097 - 473306 109 69 aa, chain + ## HITS:1 COG:SP0079 KEGG:ns NR:ns ## COG: SP0079 COG0569 # Protein_GI_number: 15900024 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pneumoniae TIGR4 # 1 68 153 220 221 114 72.0 5e-26 MRIPQSWSGKSLSQLDLRGRYNLNVLGFRDYENAPLDVQFGPDDLLRSSTYIMVVINNQH LDTLTELSE >gi|311100538|gb|AEKO01000007.1| GENE 474 473460 - 475544 1897 694 aa, chain + ## HITS:1 COG:no KEGG:SGO_1182 NR:ns ## KEGG: SGO_1182 # Name: not_defined # Def: LPXTG cell wall surface protein # Organism: S.gordonii # Pathway: not_defined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gi|311100538|gb|AEKO01000007.1| GENE 475 475625 - 476323 398 232 aa, chain + ## HITS:1 COG:SP0083 KEGG:ns NR:ns ## COG: SP0083 COG0745 # Protein_GI_number: 15900027 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 231 1 231 232 379 80.0 1e-105 MKKTILLVDDEIDILDIQNRYLLQAGYDVLVAHDGKEGLELFRKKSIDLIITDIMMPNMD GYDFISEVQYIAPDQPFLFTTAKTSEQDKIYGLSLGADDFIAKPFSPRELVLRVNNILRR LSRGGETERIELGDLVINHVTHEVRIGDQPLELTVKSFELLWVLASNPERVFSKTELYEK VWQEDYVDDTNTLNVHIHALRQELTKYTNSNIPAIKTVWGLGYKMEKPRGRK >gi|311100538|gb|AEKO01000007.1| GENE 476 476320 - 477354 590 344 aa, chain + ## HITS:1 COG:SP0084 KEGG:ns NR:ns ## COG: SP0084 COG0642 # Protein_GI_number: 15900028 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 343 1 343 350 465 70.0 1e-131 MKLKNYILVGYLVSTLLTILVVFWAVQRMLIEKSEVYFLVGMTLIASFIGAAVSIFLLSP VFSSLKHLKKQAQDIAGKDFSTEIETKGPLEFQELGQAFNDMSHNLQAIFQTLDESEQEK RMMIAQLSHDIKTPITSIQVTVEGILDGVIKEEERLHYLATIGRQTERLNKLVEELDVLT LNTQPQDTADEEVEEVFLDQLLIESMSEFQLQIEQEERDVYIQVSPESAKVKSHYDKLSR ILVNLLNNAFKYSEPGTRIEVLAQLTEQELTISVKDEGQGIHPEDLEKIFKRLYRVETSR NMKTGGHGLGLAIARELAHQLGGDISAESQYGLGSKFTFSLNLK >gi|311100538|gb|AEKO01000007.1| GENE 477 477543 - 477737 197 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|233162|gb|AAB19387.1| ribosomal protein S4 [Bacillus subtilis] # 1 55 1 57 57 80 70 2e-13 MSRYTGPSWKQARRLGLSLTGKELARCNYVPGQQGPNNRSKLSEYGLQLAEKQKLRFSYG LGEK >gi|311100538|gb|AEKO01000007.1| GENE 478 477798 - 478136 241 112 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119632785|gb|ABL84398.1| ribosomal protein S4 [Streptococcus suis] # 53 112 1 64 64 97 84 1e-18 MVLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIPSYCVTPGQVISVREKSL KVRAILEAVEATLGCPAFVSFNAKKLEGSLIRLPERDEINEALVVEFYNKML >gi|311100538|gb|AEKO01000007.1| GENE 479 478232 - 479146 428 304 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 1 304 85 387 387 328 54.0 6e-90 MKPNTQDYTRKVLNTHILPLFGDYKLNKLTTPLIQSIINKIAEKTNKGEPGAYLHYDKIH ALNKRILQYGVVMQALPFNPAREVILPRNSQKSKHQKIKHFDNQELKTFLDYLNSLDSSK YRLYYEVTLYKFLLATGCRINEALALSWSDIDFDNAIVHITKTLNYKQEINSPKSHSSYR DIDIDIQTINMLRQYKLRQTQEAWKLGRSEMVVFSDFIHEYPNNRTLQTRLRTHFKHAKV NNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSQLSMTMDIYSHLSKENAKKAVSYFETA LENL >gi|311100538|gb|AEKO01000007.1| GENE 480 479461 - 479946 330 161 aa, chain - ## HITS:1 COG:no KEGG:SAK_2091 NR:ns ## KEGG: SAK_2091 # Name: not_defined # Def: prophage Sa05, DNA-binding protein # Organism: S.agalactiae_A909 # Pathway: not_defined # 1 73 1 74 204 65 54.0 6e-10 MNNLKKLRQSIGLSQNELAKIFNVSEKTILRWEKGLTDIKSTKAEQLAKYFEVSVPYLLG FSNYKNKFEVEIDNENGILDNKFLERIIEVVGEESIPIIEKNYIEDSNSPEPDYSELASL RNAVVSLQNTDEEKLLLHFAILSESDKSLVLDLIGRLSNTR >gi|311100538|gb|AEKO01000007.1| GENE 481 480112 - 480294 148 60 aa, chain + ## HITS:1 COG:no KEGG:SDEG_2139 NR:ns ## KEGG: SDEG_2139 # Name: not_defined # Def: phage protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 60 1 60 62 66 60.0 3e-10 MLISENMAVTVRKKRAVECLTKTQLASVLNVDRRTLAKIEQGNYDTSKRIYHSVMEWLVD >gi|311100538|gb|AEKO01000007.1| GENE 482 480821 - 481096 193 91 aa, chain + ## HITS:1 COG:no KEGG:SPH_0298 NR:ns ## KEGG: SPH_0298 # Name: not_defined # Def: phage protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 91 1 92 93 84 52.0 1e-15 MFTLSRESEIEIKVTILELVSTFLDNYETHKSTLGLMSPKQVQEELQIGRKTLTEWERAG LKRYKPPIVDSRKIYYKKTDILQFLGGYYGK >gi|311100538|gb|AEKO01000007.1| GENE 483 481104 - 481556 349 150 aa, chain + ## HITS:1 COG:no KEGG:SUB1830 NR:ns ## KEGG: SUB1830 # Name: not_defined # Def: hypothetical protein # Organism: S.uberis # Pathway: not_defined # 1 135 7 144 286 109 42.0 3e-23 MSKTITASQRFLTLPIEAQVLYFHMLQHTDDDGITEAFPHLRLLSLGEDILDLLEKSHFI RKLNNELVYYVVDFREQNSIDGRRYHPSIYHHLLAETECSSSNTNSEKSCNLHSNDVANI NKDNKIQNKSKKKQDDTSETSFKIKFSSAK >gi|311100538|gb|AEKO01000007.1| GENE 484 482130 - 483191 708 353 aa, chain + ## HITS:1 COG:RSp1296 KEGG:ns NR:ns ## COG: RSp1296 COG4260 # Protein_GI_number: 17549515 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Ralstonia solanacearum # 3 274 11 276 343 129 29.0 7e-30 MALIDVVKYNGGPNVFAWKFPSDELSTFTQLIVNESQEAILVKDGQFADIFKAGRYRLTT ANIPILNNIINLPFGGESPFKAEVWYVNKAYSLDIKWGTPSPIQLQDPKFGIFVPVRANG IFGIRITDSEKFLRKFVGTLSVFNATNVTNFFRGVYVTKVKDTIASYLVKKNVGILEINA HLNDLSSFLKADLHPFLEDYGISLISFYINDISVPENDEGVKQLKSALSKRAEMNLLGYD YHQERSFDTLEGAAKNTGSDASSIMGAGLGMAMGVGLGGNMVNNFASLSQTLNSQVDNQT TKNCIRCHTPLQIEAKFCLECGQKQDLSCPQCQQKVELGMKFCSNCGQNLQGG >gi|311100538|gb|AEKO01000007.1| GENE 485 483295 - 483792 272 165 aa, chain + ## HITS:1 COG:no KEGG:Apre_0475 NR:ns ## KEGG: Apre_0475 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 11 165 93 255 255 68 30.0 6e-11 MLLEVQKKYESRNLKGNFSLLGGLIIFWGLGVLGIAFNWITILISIVFTVVGLVLIIIEL TRMPMYKRLPNYFACIADSKNGSLDAISASLGYPYETVVSDIEFLINRGILEKTYINHSR RLITSPLIGEVILQDARRVLCPNCGATNEIIGQTKECDFCGTVLQ >gi|311100538|gb|AEKO01000007.1| GENE 486 484397 - 484798 227 133 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0405 NR:ns ## KEGG: Lebu_0405 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 2 111 99 208 227 77 40.0 1e-13 MDKKSRQRFKDYALKRVVKNLFKKLIEQEIISKNDDIELFVNIDQQGFATNGLYGLGDGI LEELKYGITNFNYGTYYPPILEGKFMVHTKSCVSENDYLIQAADILANRIWNSYEKQKSK LRRIPNHIFLYLP >gi|311100538|gb|AEKO01000007.1| GENE 487 485532 - 486005 227 157 aa, chain + ## HITS:1 COG:BH0176 KEGG:ns NR:ns ## COG: BH0176 COG1943 # Protein_GI_number: 15612739 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 3 157 2 156 156 282 85.0 2e-76 MRQDNNSLAHTTWNCKYHIVFAPKYRRQIIYGKYKASIGQILRLLCERKGVEIHEAEACP DHIHMLVSIPPKLSISSFMGYLKGKSSLMIFDRHANLKYKYGNRKFWCRGFYVDTVGRNQ KRIEEYIRNHLQEDVIADQLSLFEEYDPFTGEKNKRK >gi|311100538|gb|AEKO01000007.1| GENE 488 486327 - 486653 362 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477705|ref|ZP_04062334.1| ## NR: gi|228477705|ref|ZP_04062334.1| peptide methionine sulfoxide reductase [Streptococcus salivarius SK126] # 1 108 1 109 109 132 79.0 6e-30 MTKSNNMQITDILNNIYNLILNPETTENERKLLVMFKNEIEVGKKDSSELLAELRRAIQV LAVENLSKGISLSYGVSELSKTLAEFQDESERNINLARGLSSIAMSFR >gi|311100538|gb|AEKO01000007.1| GENE 489 486803 - 488062 1389 419 aa, chain - ## HITS:1 COG:CAC2265 KEGG:ns NR:ns ## COG: CAC2265 COG2966 # Protein_GI_number: 15895533 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 21 249 13 240 257 95 29.0 1e-19 MTIDFPNETETQNEMDAILQAGRVLMESGAEIYRIEDTMGHMAKSLGIRDFSTYVVNRGV MISGLNRSGLKESRVLATSVPSIHLGKLEEVNRLSRELAEQPNQPVSIIFQKLKTIEQKT FYRPLEDIIACVIGAGSFSLALGSGLIDGTAAAISGLFVGIGMQLFSRFIHTSFLQIILS SAIAALSANILYYLGIGQHRSVIILGALMILIPGAYFVNAIREFTQNNYYSGLALMLSGV STCLSISVGVLAMISLLPFAEQLSGMFSTPSTSWQEVLIQTVMAGLGTAAFSVLYRVPKK YFLDLGTLGAGSWLLYLLIWNNTHHEVLAILFPALLVTFTSRFLAHYRGCPATVFLASSM FPLIPGMSFYRAIYFLLIGNADLGLNFLRACFLASFTIAIAVSLTQQIPSHYFVLGKKK >gi|311100538|gb|AEKO01000007.1| GENE 490 488388 - 489377 1234 329 aa, chain + ## HITS:1 COG:L45677 KEGG:ns NR:ns ## COG: L45677 COG2376 # Protein_GI_number: 15672230 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Lactococcus lactis # 15 329 1 315 316 432 67.0 1e-121 MKKIINKPENIVTEMLDGLAYVHNDLVHRVEGFDIIARNEQVAGQVGLISGGGSGHEPAH AGFVGDGMLSAAIAGAVFTSPTPDQILEAIKEADQGAGVFMVVKNYSGDIMNFEMAQELA EMEGIEVASVVVDDDIAVENSLYTQGRRGVAGTIFVHKILGHAAREGKSLAEIKDLADKI VPNIHTIGLALSGATVPEVGKPGFVLAEDEIEYGISIHGEPGYRKESMQPSRQLAEELTG KLLESFDAKSGDRYALLINGMGATPLMEQYVFANDVASLLRDAGLEVIYRKLGNYMTSID MAGLSLTLMKIEDDAWLEALESPVKTIAW >gi|311100538|gb|AEKO01000007.1| GENE 491 489408 - 489983 838 191 aa, chain + ## HITS:1 COG:lin2844 KEGG:ns NR:ns ## COG: lin2844 COG2376 # Protein_GI_number: 16801904 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Listeria innocua # 2 190 4 196 198 194 52.0 6e-50 MDKIVAVKWMQVFNQKVEAEKDHLSELDGPIGDGDHGANLARGMAAAVEAINTSDPQSTA DVLKTVSMALISKVGGASGPLYGSAFMGMMKAEQAGQDLAGVLEAGADMIEKRGHAQVGE KTMIDVWRPIIEAVKRDQLTNEVIDQAVLSTKDVVATKGRASYVGERSIGHIDPGSYSSG LLFKALLEAEG >gi|311100538|gb|AEKO01000007.1| GENE 492 489987 - 490361 502 124 aa, chain + ## HITS:1 COG:L47257 KEGG:ns NR:ns ## COG: L47257 COG3412 # Protein_GI_number: 15672232 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 5 124 4 123 123 127 59.0 5e-30 MSELGIVIVSHSADIAKGLVSLIREVAPNIPLTATGGLEDGGLGSSFDHVQVAVDSQPAK RLLAFYDLGSARMNLEMLEEFSEKDILIQHVPLIEGAYTASALLQAGASEVEILSQVNEL TIQK >gi|311100538|gb|AEKO01000007.1| GENE 493 490375 - 491358 1053 327 aa, chain + ## HITS:1 COG:CAC3400 KEGG:ns NR:ns ## COG: CAC3400 COG0673 # Protein_GI_number: 15896641 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 8 323 5 319 322 325 49.0 6e-89 MENQIKYRWASLGTGVIANELAQALEALGGKLYSVANRTYDKGVAFAEKYGIEKVYEEID QVFEDPEVDIIYISTPHNTHINFLRKALAAGKHVLCEKSITLNSEELAEAIQLAEENHVK LAEAMTIFHMPIYRRLSEIVESGKLGPLKVIQMNFGSYKEYDMTNRFFNRNLAGGALLDI GVYALSFVRWFMTSQPTEMVSQVKLAPTGVDEQAGILLTNAEGEMATVTLSLHAKQPKRG TIAYDKGYIEIYEYPRGQKAVITYTEDGSQEVIEVGETAKALQYEVLDMEAAVSGQENHL YLNYSQDVMELMTQLRKDWGLVYLEEE >gi|311100538|gb|AEKO01000007.1| GENE 494 491410 - 492603 1120 397 aa, chain - ## HITS:1 COG:SP0606 KEGG:ns NR:ns ## COG: SP0606 COG4097 # Protein_GI_number: 15900514 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted ferric reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 397 5 400 400 489 59.0 1e-138 MKSYKGILLLTISVVLTVYAWLARGMTNLVAPGLALTTLSWTFMLATRSRVLEKVFNGIE RMYTVHKFLAILSVVLLVFHNIGMGSLWGSRLAAQLGNLGIYTFLAIVVLVFLGKTLKYE TWRWLHRLVYLAYIFGLSHVYLILGQVLTKPSLLSFVVGGFAILGLSSGFYIIFLYQIIG FKNRGKIVGLKRINHDTTEIAIRLTRPMDYQFGQFTFIKILQAGFEKAPHPFSISGGHGN IIYFTVKASGDHTKQIYKKLRVGSPVAIDRAYGHMLLDQGRDKQVWIAGGIGITPFISYI RENPVLDRDIDFYYAYTGEQNAVYLEMLTAYAAKNKHFKLHTVNSQVDGYLDFTDYPLTD DTTVFMCAPVKMMEAFAKTFTANNPKAELVYEGFSFK >gi|311100538|gb|AEKO01000007.1| GENE 495 492862 - 493206 184 114 aa, chain + ## HITS:1 COG:no KEGG:STER_1333 NR:ns ## KEGG: STER_1333 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 114 1 114 114 176 97.0 3e-43 MASITIEASKVARKSPIRVDTSLVGTVSGVEAVTVSLPSSKARLSVGKMGYKSNTITVED GQTVRVTSNFLNRLIAIAPLLLYLFGGRYLPLVAFLSTIVLLFSLPFLKLEIVG >gi|311100538|gb|AEKO01000007.1| GENE 496 493427 - 494911 1727 494 aa, chain - ## HITS:1 COG:SP0341 KEGG:ns NR:ns ## COG: SP0341 COG4868 # Protein_GI_number: 15900271 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 494 1 494 494 920 93.0 0 MKKQAFSSEQYLNLQRDHILERIHQFDGKLYLEFGGKMLEDFHAARVLPGYEPDNKIKLL QELKEQVEVVIAINASNIEHSKARGDLGISYDQEVLRLIDKFNELNIYVGSVVITQYSGQ PAADAFRNQLEKNGITSYIHYPIKGYPTDMNHIISPEGMGKNDYIKTSRNLIVVTAPGPG SGKLATCMSNMYHDQINGIKSGYAKFETFPVWNLPLHHPVNLAYEAATADLDDVNMIDPF HLETYGKTTVNYNRDIEIFPVLKRMLERILGESPYASPTDMGVNMVGFAITDDEAAKEAS KQEIIRRYYQTVLDFKNERVPETAVKKIELLMNDLGITPEDRQVVVAARAKAEETGGSAL ALELPNGQIVTGKNSELFGPTAAALINAIKTSAGIDKDTKLIEPEVVKPIQGLKIDHLGS RNPRLHSNEILIALAITAANNADAARAMEELGNLKGSEAHSTIILTDEDKNVLRKLGINV TFDPYYQYDKLYRK >gi|311100538|gb|AEKO01000007.1| GENE 497 495334 - 496479 501 381 aa, chain + ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 381 1 387 387 241 36.0 2e-63 MQVGGGMEAQIRKSSGASFALVSKERGSAFSWKEGEKISHLSDVMTTIPEYISPVRLIDK KVVTGKQTVERDDLDNKDNQALGATFTKETAQSVDFRSGAFQLLKGKYISAKGQIMIHES LARKNKLSVGDKLTLSNFQVTENGAKKMTFDIVGIFSGKKEETFTGMSSDLSENQIFLHY DDASQLLDLTDKLVTKLSFGIKNPDRINQVIKQVEHLDIDWNRLRLDEDRKAFDSLKESS QALQGIVRTMMISLIVTGAGILSFLMALWTRERNHEIGILLAIGKSKGRIFAQFLMEILL VSLMSLLPALAIGRLLSRLFLQEFIGQQGQQQALRLLDQIPQGLPLGQSYLSLLVLVMLS LGVTTGLIWRKTPKEILSNMS >gi|311100538|gb|AEKO01000007.1| GENE 498 496495 - 497127 239 210 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 186 4 199 223 96 34 2e-18 MLELKDVTYSYQNKSEAILSKVNYSFEKGKFYSIIGQSGAGKSTLLSLLAGLDYPKKGQV LFNGENIKKKGSSYHRRHHVALVFQNYNLIDYLTPLENVRLVNKNADKKILSELGLDEKQ INRNVLQLSGGQQQRVAIARALVSEAPIILADEPTGNLDEETAKDIIAILKRMALDRQKC VIVVTHSKEVAQASDVVLELKKKQLIEKKK >gi|311100538|gb|AEKO01000007.1| GENE 499 497141 - 498517 935 458 aa, chain + ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 458 1 459 459 481 58.0 1e-136 MFRNAFAYITRKWSKSLLLLIIILLMSTLSLLGLAMRSATQEAASKSLGSITNSFSMQIN RNTNPGTPRGAGNLKGEDIKKISETKGIVSTIKRINGIGDLLDHEIIETEQTLQNQSPER AKNFKSTLMLTGVNDSSKEDKFVSGAYKLVEGEHLTDKDHNQILMHEALAKKNGLNVGDK VKLKSNLYDADNEKRADETVEVTIKGLFSGQNKAAVTYAQELYENTLITDLDTVAKLYGN AVETATYEDATFFAKGDQNLDSLIAKIKKLNINWSLYDLVKSSSNYPALQKSILGMYRVA NRMFIGSLIFTSLLLTLLLILWLNARRREVGIFLALGLKKTQVAGQFLIELLMIALPAFL LSYGLASFFAEKVGNTVLSNVTEGINKQMTKESLAANLGGGAEAESFSKTLTQIHMTVQP KQLLVVILVGGFILSLVSLISSRWLLHKKPKDLLVDVE >gi|311100538|gb|AEKO01000007.1| GENE 500 498590 - 499243 295 217 aa, chain + ## HITS:1 COG:SP0603 KEGG:ns NR:ns ## COG: SP0603 COG0745 # Protein_GI_number: 15900511 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 216 1 217 218 298 72.0 4e-81 MKILIVEDEVLIREGMSDYLMECGHEVFEAGDGHEALDLFYREMPDLVLLDIQLPILNGL EVLKTIRKTSSVPVLMLTAFHDEDYKLTAFGELADGYLEKPFSLSLLRVRIEAIFKKLQP SRVFTYGDVRVDFESYTASLAGQAISMNAKELEILEYLLQHEGKARTRSQILDAVWKETE EIPFDRVIDVYIKELRKKLELDCIVTVRNVGYKLERP >gi|311100538|gb|AEKO01000007.1| GENE 501 499240 - 500544 808 434 aa, chain + ## HITS:1 COG:SP0604 KEGG:ns NR:ns ## COG: SP0604 COG0642 # Protein_GI_number: 15900512 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 433 1 438 442 414 53.0 1e-115 MTKRSIFAKIFLITFALFSSLVILLHASVYFIFPSTYIESQRQTILKKSQVLADSFQGQE VGTIETVIALYSKTNDIKVYIKGKEKQNSLEVKDDLLLNPSSQNNSLVIEERKIQTKEGQ DLTLQFLATVDSQKEARDISLGFLPYTLLASFVLSLIASYLYARMISAPILEIKRMTKRM KRLDRTASLPIDSQDEIGVLKQHINDLYHHLLEVIDNLEQQKQENLKLEQMKVEFLRGAS HELKTPLASLKIILENMRDNIGRYKDRDRYLSVSLDIVDEMNQIVLEILSLSSVQELGDD KEWIQLDDVVNRILTQNQVLVENRFLSIDNYLPATSIFMNLAILKLVLSNIISNAVKHSD EGGVVRIGLENGGTDFVIENTIVSKENTSTKAQSKKEGGLGLFVVKYLLEHEELSYRFEE SPTGRRFVMVLPKK >gi|311100538|gb|AEKO01000007.1| GENE 502 500772 - 502385 1630 537 aa, chain + ## HITS:1 COG:SPy1973 KEGG:ns NR:ns ## COG: SPy1973 COG0366 # Protein_GI_number: 15675767 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pyogenes M1 GAS # 1 536 1 536 537 850 75.0 0 MQKHWWHKATIYQIYPKSFMDKNGDGIGDLKGITSKLDYLQKLGITALWLSPVYDSPMDD NGYDIANYEAIADIFGDMSDMDELLVEAKKRDIRIIMDLVVNHTSDEHAWFIEARENPES LERDFYIWRDKPNELVSIFGGSAWEYDETSGQYYLHFFSKKQPDLNWENPQLRQKVYDMM NFWIDKGIGGFRMDVIDMIGKIPDQLIDTNGPKLHDYIKEMNQASFGKHDLLTVGETWGA TPEIAKQYSNPDNQELSMVFQFEHIGLQHKPDSPKWEYEKELDVSALKAIFNKWQTELEL GQGWNSLFWNNHDLPRVLSMWGDTGVYREKSAKALAILLHLMRGTPYIYQGEEIGMTNYP FKTLEELNDIESLNYTKEALEKGASLEVIMDQIRQVGRDNARTPMQWDTSKNAGFSSAEQ TWLAVNPNYKAINVASALANPDSIFYTYQKLVELRKTQDWLVDADFELLETTDKVFAYIR KTKDSSYLIAVNLSDQEQIFDYNFDVEEVVISNTEVKPISDQGKLQAWDAFCVKLKK >gi|311100538|gb|AEKO01000007.1| GENE 503 502514 - 503515 1227 333 aa, chain + ## HITS:1 COG:lin2620 KEGG:ns NR:ns ## COG: lin2620 COG1087 # Protein_GI_number: 16801682 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Listeria innocua # 1 329 2 328 328 438 65.0 1e-123 MAILVLGGAGYIGSHMVDRLVEAGQEKVVVVDNLVTGHRAAVHPDAVFYEGDLADQDFMR NVFKENPDVDAVIHFAAYSLVAESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFSSTA ATYGIPEEIPILETTPQNPINPYGESKLMMETIMKWSDQAYGIKYVPLRYFNVAGAKPDG SIGEDHGPETHLLPIILQVAQGVREKIMIFGDDYNTPDGTNVRDYVHPFDLADAHLLAVE YLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDTLIASSEKART VLGWKPQFDNIEKIIASAWAWHSSHPKGYDDRD >gi|311100538|gb|AEKO01000007.1| GENE 504 503646 - 504488 971 280 aa, chain + ## HITS:1 COG:SPy1693 KEGG:ns NR:ns ## COG: SPy1693 COG0656 # Protein_GI_number: 15675551 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Streptococcus pyogenes M1 GAS # 3 280 4 279 279 324 57.0 1e-88 METYTLSNGVTIPKIGFGTWQIPEGEEAYNSVSFALKAGYTHIDTAQIYGNEVSVGKAIA DSDVAREDIFLTTKLWNDKHDYELAKASIAESLERLGVDYLDLLLIHWPNPKALRETDAW KVGNAGAWKAMEEAYKDGKVRAIGVSNFMQHHLDALLETAEIVPHVNQILLAPGCAQENL VAYCQERDILLEAYSPLGTGSIFGNEDVEAVAERNGKSVAQVALRWSLQKGFLPLPKSVT PKNIEANLDIFDFDLLEDDMAVLDKIQGIKTQDDPDTVNF >gi|311100538|gb|AEKO01000007.1| GENE 505 504588 - 505274 452 228 aa, chain + ## HITS:1 COG:no KEGG:STER_1325 NR:ns ## KEGG: STER_1325 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 228 1 228 228 382 89.0 1e-105 MESRNLLPQNTRMMANLLSFSGGALDVFCHMYYHSLVATQTGNILLLVADWRSSNMYHNM LRCFSILFFSLGFLFGMWFKDHRKNAYWRVYGLLPLCVMTAILPFLTPNALLELPIIAFS AGIMMKTFTGSQIENHPFVIFMTSGNYRRMLTALYYVIEGSGDQKEYRRQAVNYGFVVVS FVVGAVVSALLMHFIHIKSIWLITISLITIMVYYSSEVKRLGLKKTNL >gi|311100538|gb|AEKO01000007.1| GENE 506 505367 - 505870 592 167 aa, chain + ## HITS:1 COG:lin0151 KEGG:ns NR:ns ## COG: lin0151 COG0778 # Protein_GI_number: 16799228 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Listeria innocua # 1 165 1 165 210 188 57.0 5e-48 MPVVSNDFSDIVYNRRSIRNFDPSVKIPREELLEILDKTVTAPSSVNMQPWRFVVVDSEE GKEKLTPFVSFNGVQNETSSAMVLIFADLKSQERAEEIYGKAVAQGKMPEEVKEKQLSSI VPMYDNAPREVMNEIVHIDASLAAMQLMLVARSYGYDTNAIGGYKTY >gi|311100538|gb|AEKO01000007.1| GENE 507 506105 - 507307 916 400 aa, chain + ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 190 383 1 194 196 275 71.0 2e-73 MRTVFGIDVSKASSEVAILVNGERVHSYTMPNDIIGFSHLLKDLKTVSNPEIIFEATGVY SRRLQAFLEENSYDYTRLNPLEAKKQLDSLRVRKTDKIDAEKLASSQFVLNRKPTYVQEE VYQNLHDLSRFYQNLTEDIVRTKNRLHKVLQVAFPEIENLLSTPTGEQYWNLVSIFPTKH WVLELSEVELKETIRNSTSKRISENRVGNLAEKLVGLAKQSYSAISKTSPMIEEVKYNAQ ELIRLTNRREQVLQQLIALAEPLPEYEILLSIPGIAETTATSIIGELGDIRRFKSANQIN AFIGIDLKHYESGDFLAQEHITKRGNPYARKIMYKCIHNIASASHTNPCHIADFYEKRKR QSQTTSTKPHTIASIHRLIRTMYYLIMHNKLYDYTLAKSH >gi|311100538|gb|AEKO01000007.1| GENE 508 507787 - 508470 530 227 aa, chain + ## HITS:1 COG:CAC0860 KEGG:ns NR:ns ## COG: CAC0860 COG0745 # Protein_GI_number: 15894147 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 4 224 7 230 231 176 43.0 5e-44 MARILQIEDNEDIQNILFNLFSEEHDIIQAYSGTEGELVFQSQEIDLVLLDIMLPGKGGE EVLKFIRQRSSVPVIMLTALGDKHLISQYLLDGANDYIVKPFDLEEVYARVSVQLREHSK GSDRPDNIYQVKNITINSDSFEVSCQGKVIRLGKKEFQIFHTLLQNPKKIFTKDDLYETV WEAPYLSCDNTLNAQLSNLRKKLAQVDAGTEYIETIWGLGVRLKGED >gi|311100538|gb|AEKO01000007.1| GENE 509 508470 - 509345 545 291 aa, chain + ## HITS:1 COG:CAC2730 KEGG:ns NR:ns ## COG: CAC2730 COG0642 # Protein_GI_number: 15895987 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 289 1 298 303 104 25.0 2e-22 MEGLLIVLIGLLLGVTTCLVRYYLAVKSLSKQIEEKLVEESHRRITLKNQPKSLVTLTNR IESLFTQIEKTKLVAVQEKKTMDMAISNIAHDIRTPLTVASGYAQQSLRSSREDDMAMEK ISKNLLTVSKRLEALLEYRRLTEGAIQPQFQDVDFSQLVVKSILPYYDMFQETGITLDIQ VTPDIQCEMDPDIFERLFQNIISNVLKHGKTQAHLTLQKKDDGIYLSVSNMVQQTIQHLD RLTTRFYSENLSDTEDSSGLGLYITEHLVQVLEGELHLSYENEWFYLTVRL >gi|311100538|gb|AEKO01000007.1| GENE 510 509503 - 509679 67 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNQTSASAKTDNDYQYSNVIFGFKNKKNKKSKDIPTYKMSETFKIADVEYTIHTKEVV >gi|311100538|gb|AEKO01000007.1| GENE 511 509701 - 510012 355 103 aa, chain + ## HITS:1 COG:no KEGG:SSA_0301 NR:ns ## KEGG: SSA_0301 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 2 102 91 191 191 121 62.0 1e-26 MNAKGSYLILNVTVKNNGTKAITVSDSDFKLVKDKTEYKTDSTAGIYANDDANLFFTSVN PENEVTGNVVFDLNPDTISDTNLKLKVDAGFGNSNKAFVKINE >gi|311100538|gb|AEKO01000007.1| GENE 512 510064 - 510819 875 251 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0997 NR:ns ## KEGG: SmuNN2025_0997 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 251 1 247 247 263 58.0 6e-69 MLHTIHADFYRLFRSKGFWISEIILALNIISGVLLGGTGHVGVETGAKQAVKSASSWTGV GSLINYSSSISMTVLFTLIVVSIILGVDLAQKLYKNNLTSGISRSGFFFAKATVIVAITL GQLLLSYGLAFVLGTLCHGLGTVPDHFVRNFALTFLLQFLCNLAWVSLTTVALYLTHSIV TTFVTYTLGLVALTVPAAIFPKVEILKYLSLNFNYGMTADKTIIQNTAIVAVGFILAFTA LGLITFEKQDL >gi|311100538|gb|AEKO01000007.1| GENE 513 510824 - 511744 270 306 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 302 1 303 311 108 30 5e-22 MKKVLEVRHLTKRYGQHLALDNVNLTLEKGEVYGLIGRNGAGKTTLIKVITKLIRPSQGS VSLFHSTSKSEWTHALKRVGSVIETPVALNHLNARQNLRYYCKIHHVPNPDNVIDEILDT VGLGHTGKKKFRSFSLGMKQRLGIAIALIAKPDLLILDEPINGLDPVAIKEFRQMIKKLS EEQGMTVLISSHILSELYQVSTRFGIIDHGQIIREITKDEFEHLSEDYIVLKTNQLALAS RILQDQLHQHFKVVNGNNEIHIFDKSHVIKAIVKELVKQEVEIDEIYYKRQDLENYFTQL VDSERR >gi|311100538|gb|AEKO01000007.1| GENE 514 511993 - 513285 1066 430 aa, chain + ## HITS:1 COG:lin2906 KEGG:ns NR:ns ## COG: lin2906 COG1455 # Protein_GI_number: 16801965 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Listeria innocua # 22 416 32 433 450 110 25.0 4e-24 MTNYLVQRFLWFRERGFVQITQKTLVSLFPFFLFSGIIRVISLSVFSELGYVNQLFLVSD WLPAFKITGQVLINLSNFLGGLAGPLSTYFAGKYTAGHYGRSTGTAGVTSLLVSLIIGSQ ELLLSPLNDGVLTRINLPASINIMLAIFVGYLVGQIFRFSRASDDQIVDKDYIYQPKTVR PIFLSLILAIGLNILFVIGEQANIFQTIRQVTSTFTVTDNHLFLTFMMGLLNTFFAWIGN SQAFALNSIAEDSFALENLTYAVSHHTTTGLPHLYTLTNLYHSYGLVAGIGSGLALLVAL LLASTSYKDKKVSLLSVFPSLFNNGAPFMVGIPVLLNLVYIVPFLLAPMINMSIAAVALA IHLMPAAVYPVPDGTPSLLFAFIGTGGSLRALAISLLCFAVDILIFIPFVRLSNKVQHGL KEEGESLETK >gi|311100538|gb|AEKO01000007.1| GENE 515 513272 - 514135 837 287 aa, chain + ## HITS:1 COG:lin2722 KEGG:ns NR:ns ## COG: lin2722 COG4814 # Protein_GI_number: 16801783 # Func_class: R General function prediction only # Function: Uncharacterized protein with an alpha/beta hydrolase fold # Organism: Listeria innocua # 8 257 2 262 291 103 29.0 5e-22 MKLNKKTKLVFILVALFLIGLAVPSYSWTRKNVKEIETFYNSKLSPIIMIPGSSATENRF DGLVRKLNQDRRGVKHSLLKVKVWNNGRITFEGKIKAKDNEPVIVIGFENNKDGYSNIKK QAKMMNQAFEALQNKYNFNNFKGLAHSNGGLIYTAFIENYLSDYDVKINSLMTIGTPYNF TETNIKNKSVMLADFIAAKENIPSTLHVYSVAGTITYDSDELVPDASVSAGKYIYQNQAK SYTEITVTGEDAQHSDLPTNDEVVDLVKQHIEGQGVRKEQKTKLEPQ >gi|311100538|gb|AEKO01000007.1| GENE 516 514160 - 514351 97 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477700|ref|ZP_04062329.1| ## NR: gi|228477700|ref|ZP_04062329.1| hypothetical protein STRSA0001_1169 [Streptococcus salivarius SK126] # 1 39 1 39 39 65 89.0 1e-09 MDSNGKATWNLHIWDLSFFFAILLNYNKKNVVKQGVTTIQKVSLTLKNRAIINSILLYLI ISN >gi|311100538|gb|AEKO01000007.1| GENE 517 514316 - 514765 458 149 aa, chain + ## HITS:1 COG:SP1636 KEGG:ns NR:ns ## COG: SP1636 COG1959 # Protein_GI_number: 15901472 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 146 1 145 145 172 59.0 1e-43 MQIPSRFTIAVHILTLIAQNKGNETKLTSDLMAGSVGVNPVIIRKTLSQLKKADLISVQR GSGGATLVKIPEEINLLQVYRAVDSIGPSGKLFSFHENPNPACPVGRNIHGILDQSLEDV QMAMEKELEKKTLAGILKDAKANWKEVGA >gi|311100538|gb|AEKO01000007.1| GENE 518 514899 - 515759 872 286 aa, chain + ## HITS:1 COG:SP0073 KEGG:ns NR:ns ## COG: SP0073 COG2514 # Protein_GI_number: 15900018 # Func_class: R General function prediction only # Function: Predicted ring-cleavage extradiol dioxygenase # Organism: Streptococcus pneumoniae TIGR4 # 1 281 1 281 284 383 65.0 1e-106 MTYDYNSKIYLAEAVLNVKDLARQTAFYTQVIGLEILSQTATEIILGAGNKPLVHLIETN REEAVKSSYGLYHMAIMLPSREDLADVFKHIAELDYPFVGAADHGYSEALYLEDLEGNGI ELYRDKTVTEWDIREDGRIVGVTEALSAQEIYEMGRKVEPFVIAKDTRMGHIHLLVKDSQ LATTFYQDVLELANKFTISSASWIASGDYHHHLAVNEWGGKNLVKHEEDMPGLAYYVLEV ANKGDLIAIAERANNRGAEVKWLSSNALTFEDNDGILTRVRKNINN >gi|311100538|gb|AEKO01000007.1| GENE 519 516407 - 517792 1581 461 aa, chain + ## HITS:1 COG:SP1001 KEGG:ns NR:ns ## COG: SP1001 COG0531 # Protein_GI_number: 15900874 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Streptococcus pneumoniae TIGR4 # 1 459 1 459 463 568 68.0 1e-161 MSIFRKKDVGLAQTEMKRHLTLRDVVLLGIGAMVGTGIFTITGTAASTLAGPALIISVLI SAVCVGMSAIFFAEFASRYPSAGGVYGYLYASWGEYPAWMGGWLTMIVFMNAVSSVASGW GAYLKGLLASFGLQLPKAISGPFNPSQGTYIDLLPVLVLVLVTALLLMDSKQVLRLNSLL VVLKFSALAVFILVGLFHLNPDNWANFAPFGFGQIYGGKTGIIAGASLMFFGFLGFESIS MTVDEIKEPQKNVPRGIVLALIIVASLYAVVSLVLTGVVHYTKLNVDDAVAYALRYIGVP WAANYVSVVAIMTLITVCISMAYALSRMVYSLARDGFLPQTFQKVSKTHKVPHHATLLTG ILSAISAGVFSLANMASLVNIATLAYLVLLAIALIILRKDKGLPQKGEFKVPFVPVLPIL SIIVCLSFMSQYSWQTWLAFGIAVLVGSAIYAFYGYKHSKY >gi|311100538|gb|AEKO01000007.1| GENE 520 518796 - 519056 344 86 aa, chain + ## HITS:1 COG:no KEGG:SSA_0394 NR:ns ## KEGG: SSA_0394 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 85 7 91 92 146 83.0 3e-34 MNDKQMKIVGWVATCMSVLMYVSYIPQIMDNLAGHKGNFIQPLVAAINCSLWVYYGLFKK ERDLPLAAANAPGIVFGLITTLTCLF >gi|311100538|gb|AEKO01000007.1| GENE 521 519179 - 519385 409 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|301802249|emb|CBW35001.1| ## NR: gi|301802249|emb|CBW35001.1| CsbD-like protein [Streptococcus pneumoniae INV200] # 1 66 1 62 84 68 69.0 1e-10 MGIEDKLNQAKGALKEGTGKLTGDKKTEIEGAVEKVVSKAKDSLEDIKGSVEGAVEGAVE GLKNSFKK >gi|311100538|gb|AEKO01000007.1| GENE 522 519452 - 520084 638 210 aa, chain - ## HITS:1 COG:FN0036 KEGG:ns NR:ns ## COG: FN0036 COG2323 # Protein_GI_number: 19703388 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 5 210 5 210 210 256 61.0 2e-68 MTSFYLTVAIKLALGLISLVFVINLTGKGNLAPSSATDQVQNFVLGGIIGGTIYSSNVSI LQYIVILVIWTILILLLKWLNTNIRFFKHLIDGKPTVIIKHGQLDPEACRSKGLSASDVA LKLRSQGIFQLKEVKRAVIEQNGQLIVVRVGDENPKYPIVTDGVVQLEILDSIGKSEAWL NDELTKMGYDNISDIFIAEYDKGNINVVTY >gi|311100538|gb|AEKO01000007.1| GENE 523 520081 - 520533 520 150 aa, chain - ## HITS:1 COG:no KEGG:SGO_0380 NR:ns ## KEGG: SGO_0380 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 150 1 150 150 197 72.0 1e-49 MKFYSYDYVLSQISQQNWVMVAIAAGLILVTGVFAFKAFKERHNTKFRELSIISILTLVA VVLIAISNFQTNQTNDNQFRASLHFIEVISKQLDVKKENVYVNTSAATDGAIVKVKDNYY RAIASSDPDSYLLEQIKLYKSDVELVEVKK >gi|311100538|gb|AEKO01000007.1| GENE 524 520907 - 521848 1118 313 aa, chain + ## HITS:1 COG:SP0736 KEGG:ns NR:ns ## COG: SP0736 COG1482 # Protein_GI_number: 15900631 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 313 1 314 314 553 85.0 1e-157 MSEPLFLQSVMQEKIWGGTHLRDVFGYDIPSDHVGEYWAISAHPNGVSTIKNGRYAGQTL DVLYAEHRELFGNRQEPVFPLLTKILDANDWLSVQVHPDDAYGLEHEGELGKTECWYIIA AEPGAEIIYGHNAKSKEELRQQIESKDWENLLTKVPVKAGDFFYVPSGTMHAIGAGIMVL ETQQSSDTTYRVYDFDRKDDQGNLRELHLEKSIDVLTIGEPANSRPVTTKVDDLKSTLLV ASDFFAVYKWEISGKADFEKTADYSLFSVLDGQGSLLVDGQEYPIAKGSHFILPSDVQAW QIKGDLELIVSHP >gi|311100538|gb|AEKO01000007.1| GENE 525 522071 - 523399 1572 442 aa, chain + ## HITS:1 COG:SP0626 KEGG:ns NR:ns ## COG: SP0626 COG1114 # Protein_GI_number: 15900533 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Streptococcus pneumoniae TIGR4 # 1 442 6 446 446 482 70.0 1e-136 MLKKGGLTALLLFGMFFGAGNLTFPPQLGFESGGHFWPAIAGFVLSGVGIAILTLIIGTL NPKGYIHEISQKISPKFALLYLAVLYLSIGPFFAIPRTAATAFSIGIAPMLGNSHTSLWL LAFTAVYFALALWIAMNPSKILDSIGRILTPIFALLIVILIVVGAFKYGGHSTHTATEAY KATAFGNGFLEGYNTLDALASVAFSVVAVVTLNQLGFKSKKEYISTIWVVGILVGLMFSG LYLGLAFLGNHFPLDTSTLGEGANLGAAVLSSATQAIFGPMSQIFLAVMVTVTCFTTTAG LIVATGEFFNKAFPQVSYKTYAIVFTLIGFAIANLGLNNIIAFSVPVLLILYPITITIVM IVIANKFVALSKPGMQITVGVVTLIALLSVIGSQFKLAGLNAIINFLPLSGASLPWLIPA ILLILLSLVLPDKIKSESFEME >gi|311100538|gb|AEKO01000007.1| GENE 526 523527 - 524477 964 316 aa, chain + ## HITS:1 COG:SP0660_1 KEGG:ns NR:ns ## COG: SP0660_1 COG0225 # Protein_GI_number: 15900561 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Streptococcus pneumoniae TIGR4 # 6 170 1 165 166 274 80.0 1e-73 MSNLNIHMIYLAGGCFWGVEEYFSRVPGVLDAVSGYANGRSETTRYELIGQTGHAETVQV TYDASKVSLREILLHFFRIINPMSKNKQGNDVGTQYRTGVYYTDANDLSTIKQVFQEMTE QYGQPLAVELLPLEHFIPAEDYHQNYLKKNPNGYCHINVNQAANPVIDASTYHKPNREEL KESLSPEAYAVTQENGTERAFTSPLWNQFEPGIYVDVVTGEPLFSSKDKFDSACGWPSFS RPISPEVANYKEDHSHNMDRIEVRSRVGDSHLGHVFPDGPSDKGGLRYCINGVATRFVPK ADMAKEGYAYLLDQVD >gi|311100538|gb|AEKO01000007.1| GENE 527 524833 - 526182 1364 449 aa, chain - ## HITS:1 COG:SP1166 KEGG:ns NR:ns ## COG: SP1166 COG0534 # Protein_GI_number: 15901031 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Streptococcus pneumoniae TIGR4 # 1 447 1 447 453 508 67.0 1e-144 MHETHSLRERFLVFFKIFVPILIYQFANFSAAFVDTTMTGQYDTLHLAGVAMATSLWSPF FTFLTGIVSALVPIIGHHLGAGRKDRVAPDFYQFLYMALGLSLILFALVFLGAPLVLNHL GLETLVRKVALGYLRFLSLGIIPLLLFSVVRSFLDALGLTRLSMYLMLLLLPLNGFFNFL LIYGIAGLPELGGAGAGLGTSLAYWALLLISIAVIRKHKKIKPYHIEKVQPLDKAALLDA LKLGLPIGGTVFAEVAIFSGVGLVMSKYPSLVIASHQAAMNFSNLMYAFPLSISSAMAII ISYEFGARRMDAVKSYSKLGRLTALGFSIFTLIFLYFLRYDLAELYGHEPEFLRMTAIFM TYSLFFQVADVFAAPLQGILRGYKDTKVPFYLGVLTYWGITLPVGFLLEKVTGLGPYSYW IGLIASLIVSGLCYQWRLNRIVKRYESHP >gi|311100538|gb|AEKO01000007.1| GENE 528 526384 - 526770 338 128 aa, chain + ## HITS:1 COG:no KEGG:CLI_0951 NR:ns ## KEGG: CLI_0951 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 1 121 11 133 140 115 52.0 4e-25 MAEQTEMALATSVSNIPNVRIVNFYFDPSENILYFSSFKDNDKVKEIEENPSIAFTTIPH TGNQHVKAKGLAKRSSKTIFDMAAHFIAKVPDYKKTIDYAGESLILFEVRFDTAIVIKDL ATISSLRL >gi|311100538|gb|AEKO01000007.1| GENE 529 526813 - 528090 396 425 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 13 425 19 425 447 157 28 1e-36 MQNKEKHSQAAVLGLQHLLAMYSGSILVPIMIAGALGYSAHELTYLISTDIFMCGVATFL QLQLNKYFGIGLPVVLGVAFQSVAPLIMIGEKHGSGAMFGALIVSGIYVILISGVFSKVA NLFPSIVTGSVITTIGLTLIPVAIGNMGNNVDKPTGQSLFLAAITVLIILLINIFTKGFI KSISILIGLIVGTAIAASMGLVDFSPVAAAPNVHVPTPFYFGMPKFELSSIIMMCIIATV SMVESTGVYLALSDITKEPLDSTRLRNGYRAEGLAVLLGGLFNTFPYTGFSQNVGLVKLS GIKTRLPIYYAAGFLVLLGLLPKFGALAQIIPSPVLGGAMLVMFGFVSIQGMQILARVDF ANNEHNFLIAAVSIAAGVGLNNSNLFNSLPTAFQMFFSNGIVVASLLAIFLNAILNHNKK ENKNE >gi|311100538|gb|AEKO01000007.1| GENE 530 528090 - 528671 718 193 aa, chain - ## HITS:1 COG:SP1847 KEGG:ns NR:ns ## COG: SP1847 COG0503 # Protein_GI_number: 15901675 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 193 1 193 193 310 87.0 1e-84 MKLLEDRILKDGNVLGENILKVDSFLTHQVDFELMREIGKVFAEKFKDTGITKVVTIEAS GIAPALYAAEALDVPMIFAKKAKNITMNEGILTAEVYSFTKQVTSTVSIASKFLTPEDKV LIVDDFLANGQAAKGLIQIIEEAGAHVEAVGIVIEKSFQDGRALLEEAGYPVVSLARLDR FENGQVVFKEADI >gi|311100538|gb|AEKO01000007.1| GENE 531 529121 - 529801 648 226 aa, chain + ## HITS:1 COG:SP1633 KEGG:ns NR:ns ## COG: SP1633 COG0745 # Protein_GI_number: 15901469 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 224 1 224 225 377 84.0 1e-104 MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNG YHWCQEIRKVSKVPIMFLSSRDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSY EFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQILQVLFERSGNIVSREDLMKEL WNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG >gi|311100538|gb|AEKO01000007.1| GENE 532 529791 - 530765 718 324 aa, chain + ## HITS:1 COG:SP1632 KEGG:ns NR:ns ## COG: SP1632 COG0642 # Protein_GI_number: 15901468 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 53 324 53 324 324 328 63.0 1e-89 MMGKCQFIKYYIRSRLPFYLLVIFNGIILILFAFLFEEAADVLYYSLTILTFVSIIMVAW DLFRSYQSYKLAYLYEEITPLSPLEFYLAQTLENARENQKNQTEEGCKRYTDLMDYYTLW VHQIKTPIAASQLLVQDVTDRNIRSLLEQEIFKIDAYTHLVLQYLRLENFHDDLQLKQVA LEQLVKEVVRKYSLFFIQKGLTINLDDLDVKVISDEKWLLVIIEQILSNSLKYTKSGGIE IYFKDNTLYLKDSGIGIKDSDILRVFERGFSGYNGRLTQQSSGLGLYLSKKIADQLGHDI SISSQVGQGTTVSIHFQKKKLAID >gi|311100538|gb|AEKO01000007.1| GENE 533 530910 - 531668 301 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 23 225 15 220 245 120 34 1e-25 MTLLDVQHVKKIYKTRFKGNQVEALKDIHFTVEKGEYVAIMGESGSGKSTLLNILAMLDK PTAGRVYLNGMDTATIKNKDASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPLK QMMTQVEAVSRQLGIHPLLEKYPYEISGGQKQRVAVARAIITKPEILLADEPTGALDSKS SAALLDVFDTINASGQTILMVTHSTSAASRAQRVLFIKDGILYNQIFKGDKSEHQMFQEI SDTLTTMASEVN >gi|311100538|gb|AEKO01000007.1| GENE 534 531670 - 533670 1487 666 aa, chain + ## HITS:1 COG:SP0913 KEGG:ns NR:ns ## COG: SP0913 COG0577 # Protein_GI_number: 15900794 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 666 1 662 662 670 54.0 0 MFRLTNRLALSNLIKNRKLYYPYTLATILVIAITYIFTSLLLNPHLGDLPGADSIKAVLG MGLVIVALSSGIIVLYANSFVMKNRSKELGLYSVLGLEKRHLFSMILKETMIMGVVTLLL GIGVGALFDKLIYAFLQRIIGESTGLVSTFQVMTIPIVLVIFACIFSLLVLVNGFRLLRL NPLQLTKDGLKGEKKGRFLVVQTLLGLGTMGCGYYLALSVKNPVTAIISFFLAVLLVILG TYLLFNAGTTVVLQLLKKKKSYYYKPNNMISISNLVFRMKKNAVGLATIAILSSMVLVTL VGATNIYAGKKDYLASAAPHDYSVTGTNVDVTSTQKVMDDFLSQSGNQVNRKTEVTYIYF GIKEQEKNKLTIFSKNERKVLPKSIFIVFSQATYKQLTGKDLNLTSNQVGLFTKNKTLKD QKSVSINGQNYQIQNSLNDFIKGKVPNNFSVISSDYSYLVVPDTDNFKESIKGTATTQTT YIGVNVKDPAHDAKKNSDLLDKLADKETQQLDGQTTGVPWFNLITNSRYDVEGALNGFVS GTLFIGIFLSIIFMIGTVLVIYYKQISEGYEDRERFVILQKIGLDDQQVKKTIRKQVLTV FFLPLIFAFIHLAFAYHMLSLIIRLIGVLNPDLMLVVTIIVCGVFFLAYVLVFALTSRSY RRIVSM >gi|311100538|gb|AEKO01000007.1| GENE 535 533755 - 534249 384 164 aa, chain + ## HITS:1 COG:L29314 KEGG:ns NR:ns ## COG: L29314 COG0727 # Protein_GI_number: 15674151 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Lactococcus lactis # 5 164 8 167 168 226 71.0 1e-59 MSQTIDVKRYEELARQKQGEHRKFLAQLKKKAPKNLDKIVQEVHNEVFQEIDCTQCANCC KTLGPDFTEQDITRIAKHFRMKLPAFEEMYLQVDEDGDKVFKSMPCPFLGPDNLCDIYDV RPKACAAFPHTNRKKIYQINHLTIKNTLFCPAAYLFVEKLKDRI >gi|311100538|gb|AEKO01000007.1| GENE 536 534393 - 534842 318 149 aa, chain + ## HITS:1 COG:SP2068 KEGG:ns NR:ns ## COG: SP2068 COG0295 # Protein_GI_number: 15901887 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Streptococcus pneumoniae TIGR4 # 1 144 1 144 144 241 73.0 4e-64 MDIWQKMYERAQALYQPQEVSDFVYARHVVAAVEAEDGQIFTGFCMEGTCGVFHLCAERA ALFNMYQETGQTKVKRIIAFRDQPPHGGPSGMPCGACREFLMELHPDNRNLEFMVDYETR QTITLGELLPLWWGEERAQQFEEKSKDKV >gi|311100538|gb|AEKO01000007.1| GENE 537 534985 - 535923 1159 312 aa, chain + ## HITS:1 COG:BH0858 KEGG:ns NR:ns ## COG: BH0858 COG0385 # Protein_GI_number: 15613421 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus halodurans # 1 312 1 311 323 243 44.0 3e-64 MDSLVSFSKWLSKWFTVAVILWAAFNYALPATSSWVIPNTAYLLGLILFGMGLTLTTEDF KRIAKRPIPVVLGTVAHYVIMPGLAWLLCMIFHLKGATAAGVILVGSCPSGTSSSVMAFL SGGDVALDVSIETLSTLLAPLMIPTLLSFLAGQYVSVPAQSLFLSTLRIVVVPIILGVLV HSIFGKKIDAIIKIMPLISQAAILLIVGAVVSANHANIFTAATALVIPVVMLHNLCGYAL GFGFSKILGLEEPQQKAITFEVGMQDSSLGATLAMKYFVPQAAIPSTIFSIWHNISGSIL SSWWKNHSKNSH >gi|311100538|gb|AEKO01000007.1| GENE 538 536076 - 536285 292 69 aa, chain + ## HITS:1 COG:no KEGG:STER_1295 NR:ns ## KEGG: STER_1295 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 69 1 69 69 93 92.0 2e-18 MKIKTSYLIYAVIGTVFAGLSMFTDIFERGNFEVIFSNLGMIIGLSISAYILITMAKSFI DLVIKELKN >gi|311100538|gb|AEKO01000007.1| GENE 539 536296 - 536475 130 59 aa, chain + ## HITS:1 COG:no KEGG:STER_1294 NR:ns ## KEGG: STER_1294 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 13 59 13 59 59 68 82.0 6e-11 MKLLKILSIMLLAAIWTILFAYVLLHGSSDILYSVMGVSVAGCYVFLAFYQKKGNHKHE >gi|311100538|gb|AEKO01000007.1| GENE 540 536468 - 537349 267 293 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 287 7 306 318 107 27 1e-21 MSEAILQVTNLVKKIKGKTILDHISFEVGKGDCLALIGPNGAGKTTLMSCILGDKKASSG QVFIKGKKGKAQDQIAVLLQENTIPSQLKVKELITFFQDISENGLSKVEIQALLQFKDDQ YQQFANKLSGGQKRLLAFVLCLIGKPDILFLDEPTAGMDTTTRQRFWEIINDLKKSGVTI LYSSHYIEEVEHTADRILVLHQGRLIRDTTPHAMRSEEKEKQVTLPSRFVPSLDKLAAIY DVTEKRDVVTFMTKDIESVWSSLQAHGCRISDIEIQNKTLLDSLFDSTREDKS >gi|311100538|gb|AEKO01000007.1| GENE 541 537346 - 538083 686 245 aa, chain + ## HITS:1 COG:SP2002 KEGG:ns NR:ns ## COG: SP2002 COG0842 # Protein_GI_number: 15901825 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 3 242 6 244 245 168 37.0 8e-42 MKALLKIEWIKTWRSWPVFIMSIGMPVGFFLLYSGMEMSPDPESQKAFVLSYMLTMTGFS MSSFGFFTFPYMLREDQTEHWLTYIEHSKISIQAYYLSKIFRVLMNFMVAILVTFCVGAF VRDVEMPLSHWLGSGVLLLLSSLVFLSLGLLLAQIKSQQIMAIVGNIVFLGLAIIGGSWM PVTMFPKWVQHISEWTPIYHINQLVVNFAKKGEFSWKSLIFILVYATIATGLAFFIKSYR ESDHV >gi|311100538|gb|AEKO01000007.1| GENE 542 538076 - 539170 858 364 aa, chain + ## HITS:1 COG:SP2001 KEGG:ns NR:ns ## COG: SP2001 COG4585 # Protein_GI_number: 15901824 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 358 1 359 365 229 37.0 9e-60 MFRTYQKNDFAYFVSLIFLVFPVLGVFGGYFPVWTLVLTGLFTIAYLLMVYLKKAYSKWI PFLWFYTLAYIIFMSVTFQGGMMWFVFFNVNLLVWRFEDSISSYRFLSFLVTLLILTSSS FLLTDDLSTHLMSMAIPLFSLGMYYFQNRMRQERKMEEALAEQNRTINILSAENERNRIG RDLHDTLGHTFAMMSLKTELALKQMDKEQYEAARKNLEELNQISRDSMYEVREIVNKLKY RTVAEELLELARLFDLSDIVLTVDSILDLDSLSPVSQSTLSMVLRELANNVIKHSQADSC QIRLRRDQGIILEFEDDGCGFEEVTGQELHSIRERLSLVDGDLEILSQSHPTIIRVHLKE GGKA >gi|311100538|gb|AEKO01000007.1| GENE 543 539167 - 539769 761 200 aa, chain + ## HITS:1 COG:SP2000 KEGG:ns NR:ns ## COG: SP2000 COG2197 # Protein_GI_number: 15901823 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 199 1 199 199 264 72.0 9e-71 MKLLVAEDQSMLRDALCQLLMLEDDVEEVHAASDGQEAIALLEKEEVDVAILDIEMPVKT GLDVLEWIRANQRETKVVIVTTFKRKGYFKRALAAQVDAYVLKERSISDLMATIHTVLAG QKEYSPELVEGVAFDNNPLSQREQEVLAMVAQGSTNQEIAESLFLSNGTVRNYMTAILTK LDAGNRTEAVRIAKEKDWLG >gi|311100538|gb|AEKO01000007.1| GENE 544 540123 - 541115 753 330 aa, chain + ## HITS:1 COG:SP0636 KEGG:ns NR:ns ## COG: SP0636 COG4586 # Protein_GI_number: 15900542 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 330 1 330 330 634 98.0 0 MAMIEVEHLQKNFVKTVKEPGLKGALRSFIHPEKQTFEAVKDLTFEVPKGQILGFIGANG AGKSTTIKMLTGILKPTSGFCRINGKIPQDNRQDYVKDIGVVFGQRTQLWWDLALQETYT VLKEIYDVPDSLFHKRMDFLNEVLDLKDFIKDPVRTLSLGQRMRADIAASLLHNPKVLFL DEPTIGLDVSVKDNIRRAITQINQEEETTILLTTHDLSDIEQLCDRIFMIDKGQEIFDGT VSQLKENFGKMKTLSFELVPGQSHLISHYEGLPDMTVDRQGNSLNIEFDSSRYQSADIIK QTLSDFEIRDLKMVDTDIEDIIRRFYRKEL >gi|311100538|gb|AEKO01000007.1| GENE 545 541117 - 541935 707 272 aa, chain + ## HITS:1 COG:SP0637 KEGG:ns NR:ns ## COG: SP0637 COG4587 # Protein_GI_number: 15900543 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 272 1 272 272 437 97.0 1e-122 MVKLWRRYKPFINAGVQELITYRVNFILYRIGDVMGAFVAFYLWKAVFDSSQESLIQGFS MADITLYIIMSFVTNLLTRSDSSFMIGEEVKDGSIIMRLLRPVHFAASYLFTEIGSKWLI FISVGLPFLSVIVLMKILSGQGIVEVLGLTVLYLFSLTLAYLINFFFNICFGFSAFVFKN LWGSNLLKNSLVAFMSGSLIPLAFFPKVVSDILSFLPFSSLIYTPVMIIVGKYDASQILQ ALLLQFFWLLVMVGLSQLIWKRVQSFITIQGG >gi|311100538|gb|AEKO01000007.1| GENE 546 541937 - 542722 445 261 aa, chain + ## HITS:1 COG:SP0638 KEGG:ns NR:ns ## COG: SP0638 COG3694 # Protein_GI_number: 15900544 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 261 1 261 261 440 94.0 1e-123 MKKYQRMHLIFIRQYIKQIMEYKVDFVVGVLGVFLTQGLNLLFLNVIFQHIPSLEGWTFQ EIAFIYGFSLIPKGLDHLFFDNLWALGQRLVRKGEFDKYLTRPINPLFHILVETFQIDAL GELLVGCILLGTTVSSIAWTLPKFLLFLVCIPFATLIYTSLKIATASIAFWTKQSGAMIY IFYMFNDFAKYPISIYNSFLRWLISFIVPFAFTAYYPASYFLQGKNGLFNIGGLILVSLV FFGISLKLWDRGLDSYESAGS >gi|311100538|gb|AEKO01000007.1| GENE 547 543461 - 549958 10174 2165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984022|ref|ZP_01817341.1| 50S ribosomal protein L1 [Streptococcus pneumoniae SP3-BS71] # 1 2165 1 2139 2139 3923 90 0.0 MKKSTVLSLTTAAVILAAYVPNEVILADTPSSEDSLKISDKETVIDKQNENKENLEDIHN VIETSKDTEEKKTTIVEEKEVVSKNPVIDNNTSNEEAKIKEENSNQSQGEKADSSASKDP ESPQKEDKLVYIAEFKDKESGEKAIKELSNLKNTKVLYTYDRIFNGSAIETTKDTLDKIK LIEGISSVERSQKVQPMMNHARKEIGVEEAIDYLKSINAPFGKNFDGRGMVISNIDTGTD YRHKAMRIDDDAKSSMRFKKEDLKGTDKNFWLSDKIPHAFNYYNGGKITVEKADDGSDFF DPHGMHIAGILAGNDTEKDIKNFNGIDGIAPNAQIFSYKMYSDAGSGFAGDETMFHAIED SIKHNVDVVSISSGFTGTGLVGEKYWQAIRALRKAGIPMVVATGNYATSASSSSWDLVAN NNLKMTDTGNVTRTAAHEDAIAVASAKNQTVEFDKVNIGGENFKYRNIGAFFDKNKITTN EDGSKAPSKLNFVYIGKGQDKDLIGLDLKGKIAVMDRIYTKDLKDAFKRATDKGARAIMV VNTVNYYNRDNWTELPAMGYEEDEGTTSQVFSISGDDGVKLWNMINPAKKTEVKRNNKED FKDKLEQYYPIDMASYNSNKPNVGDEKEIDFKFAPDTDKELYKEEIIVPAGSTSWGPRID LLLKPDVSAPGKNIKSTLNVINGKSTYGYMSGTSMATPIVAASTVLIRPKLKEMLERPVL KNLKGDDKIDLTSLTKIALQNTARPMMDATSWKEKSQYFASPRQQGAGLINVANALRNEV VATFKNTDSKGLVNSYGSISLKEIKGDKKYFTIKLHNTSNRPLTFKVSASAITTDALTDR LKLDETYKDEKSPDGKQIVPEIHPEKIKGANITFEHDTFTIGPNSSFDLNAVINVGEAKN KNKFVESFIHFESVEEMEALNSNGKKINFQPSLSMPLMGFAGNWNHEPILDKWAWEEGSR SKTMEGYDDDGKPKIPGTLNKGIGGEHGIDKFNPAGVIQNRKDKNRTSLDQNPELFAFNN EGINAPSSSGSKIANIYPLDSNGNHQDAQLERGLTPSPLVLRSAEEGLISIVNTNKEGEN QKDLKVISREHFIKGILNSKRNDAKGIQSSKLKVWGDLKWDGLIYNPRGREENAPESKDI KDPATKIRGQFEPIAEGQYFYKFKYRLTKDYPWQVSYIPVKIDNTAPKIVSVDFSNPEKI KLITKDTYHKVKDQYKNETLFARDQKEHPEKFDEIANEVWYAGAALVNEDGDVEKNLEVT YAGEGQGRNRKLDKDGNTIYEINGAGDLRGKIIEVIALDGSSNFTKIHRIKFADHADEKG MISYYLVDPDQDSSKYQKLGEIPESKFKNLKNVKDDSLNKETTEVEHHHENEESIEEKSS LTINKSISTIRDFESKDLKNLIKKKFREVDDFTSETGKRTEEYDYKYDDKGNIIAYDDGS ALQYETEKLDEIKSKIYGVLSPSKDGHFEILGKISNVSKNAKVYYGNNYKSIEIKTTKYD SHSKTMTFDLYANINDSVDGLAFAGDMRFFVKDDDQIKAETKIRMPEKNKETKTEYPYAS SYGNVIELGEGDLSKNKPNNLTEMESGKIYSDSEKQQYLLKDNIILRKGYALKVTTYNPG KTDMLEGNGVYSQEDIAKIQKANPNLRVLSEKIIYADSRNVEDGRSTQSVLMSALDGFNI VKYQVFTFKMNDKGEAIDKDGNLVTDSSKLVLFGKDDKEYHGEDKSNVEAIKEDGSMLFI DIKPVNLSMDKNYFNPSKSNKIYVRNPEFYLRGKISDKGGFNWELRVNESVVDNYLIYGD LHTDNTRDFNIKLNVKDGDIMDWGMKDYKANGFPDKVTDMDGNVYLQTGYSDLNAKAVGV HYQFLYDNVKPEVNIDPKGNTSIEYADGKSVVFNINDKRNNGFDGEIQDKHIYVNGKEYK SFDDIKQLTDKTLNIKIVVKDFARNTTVKEFILNKDTGEVSELKPHTVTVTIQNGKEMSS TIVSEEDFILPVYKGELEKGYQFDGWEISGVEGKKDAGYVINVSKDTLIKPVFKKIEEKK EEENKPTFDVSKKKDNVQANHSQLDENYKKEDLQRENHSHKSDSTKDVTATVPDENDKNF ENKKEVYLNEPENIDNKHTNIDSKSTTNNDRLPKTGTVSEVFMSLVAGIMFTLGAFLGLK KKDQD >gi|311100538|gb|AEKO01000007.1| GENE 548 550163 - 550342 105 59 aa, chain + ## HITS:1 COG:SP2190 KEGG:ns NR:ns ## COG: SP2190 COG5263 # Protein_GI_number: 15901997 # Func_class: R General function prediction only # Function: FOG: Glucan-binding domain (YG repeat) # Organism: Streptococcus pneumoniae TIGR4 # 1 59 633 692 693 83 66.0 9e-17 MKTGWLKQGGSWYYLDNSGAMKTCWFQVDGKWYYAYSSGALAVSTTINGYTVNANGEWV >gi|311100538|gb|AEKO01000007.1| GENE 549 550540 - 552519 2747 659 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|241889237|ref|ZP_04776540.1| ## NR: gi|241889237|ref|ZP_04776540.1| putative maebl [Gemella haemolysans ATCC 10379] # 46 656 24 663 1081 319 68.0 4e-85 MNRKKIILTSLASVAVLGAALAASQPSVVKADESTNTTTASSQPAGTTDTSATNSNSTTN SAENSEATQPADAGATATPKSEVTSPEIKQAEDDAKKAEETVTEAQAKVDTTTTAANEAN TKLETETKEAADANAAKTKAEEAKKTADDELAAAKQKAAEADAKAKEEAKKEEDAKKEEA DSKDALSKALDQLEESIANDPKITNKEAAKKAAKELVDKEGLLKAIESGDLKAGDILKEL ENDSNTAGNTSTTPAEAKSKDQLPEDVKAGIEKAEKADAARPASEKLQDKADDLGENVDA LKEDADALKAEEDKKAEALKKQEDTLKEAKEALKSAQDNGSDAEIVASLDKAVKAIEKAK DAAQDAFDKAASDTQAYAEELNKLTDEYNKTLEEVKAAKEKEASEPAKPKEEEPAKPAEK TEAEKAAEAKAEADAKVAELEKKVAEEAKKVEEATAKATKEAEDVKAAQTKKDEADKAKA DAEAELTKAKAEADKAKAKVEELKKEESETRTALKDALDQFEKDIDADANITNKEEAKKA LGKEDILAAVEKGDLTAGDVLKELENQNATAEANKDQDPQADEIGATKQEGKDLSELPAA DKEKLDAAYNKEASKPIVKKLQDIADDIAEKIEKLTKVADKDKADATEKAKAVEEKMLY >gi|311100538|gb|AEKO01000007.1| GENE 550 553193 - 553723 324 176 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNAAEAATTEDKPEFDLSKLNEGKLPESNKEKPAPSRPEKPAPDFPIPAKVGTPGNSPRE NSDTTAVNEPALVPTTPAAPAMPTAATPATSAVAGTNKDNTYQAPAVKAEDKKELPNTGS VNAGETSVGSRVAKDANKLPSTGDESSILTTVGMAIMSLFGILYIGKHRKNTNKEV >gi|311100538|gb|AEKO01000007.1| GENE 551 554155 - 555045 288 296 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 289 1 293 422 351 62.0 8e-97 MRLIKNTTELIGIKDQNIKISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKPSK IPLLEQAGTPTLLHLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGDLAFVAQNYETNKLIT ILDNRRQTTIRNYFLKYPLKARQKVQFITMDMSGAYIPLAKKLFPNAEIIIDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFPPNFSTT >gi|311100538|gb|AEKO01000007.1| GENE 552 555523 - 555744 285 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTIKDFKSLNTDVLATVEGGVCRPVLYGANGYGCLDTRTHQWRYVVTTGDVQATVNTVV NGWMKYGPWIPRR >gi|311100538|gb|AEKO01000007.1| GENE 553 556728 - 556955 271 75 aa, chain - ## HITS:1 COG:no KEGG:SMU.423 NR:ns ## KEGG: SMU.423 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans # Pathway: not_defined # 5 75 6 76 76 67 71.0 1e-10 MNAVLNQFEVMDDIKLSSVEGGGWVRCALGTAGSAGLGFLTGSGAGTFTFPIVGTISGGA IGGWSGGAVGIATFC >gi|311100538|gb|AEKO01000007.1| GENE 554 557341 - 557712 238 123 aa, chain - ## HITS:1 COG:L0432 KEGG:ns NR:ns ## COG: L0432 COG2801 # Protein_GI_number: 15672069 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 1 123 160 279 279 113 45.0 7e-26 METRLVIETLQDSLSTRTVADGLILHSDRGSQYTSKEYNDYLEHHSIRHSYSAKGCPYDN SCIESFHATIKKECIYAKTNVGYKDFQTCYNSIFKYIEGFYNSRRRHSKLNYICPNEFEK QNA >gi|311100538|gb|AEKO01000007.1| GENE 555 557779 - 557952 150 57 aa, chain - ## HITS:1 COG:no KEGG:Cbei_1398 NR:ns ## KEGG: Cbei_1398 # Name: not_defined # Def: integrase catalytic subunit # Organism: C.beijerinckii # Pathway: not_defined # 1 57 70 125 271 65 61.0 7e-10 MTELNIRSIVRKKYRPASLSKQEAKEYPNLLKRDFSTDKINQKWVTDMTYIYTLSDG >gi|311100538|gb|AEKO01000007.1| GENE 556 558895 - 559056 105 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLNGNHRKAEEKHFEVLKNEELATVQGGGMSIFNDINHFFCDLTNCRGKGRIG >gi|311100538|gb|AEKO01000007.1| GENE 557 559060 - 559497 107 145 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPYVFVALITVLNILEMFLMAYLPFYAICKQLGCSIGKVYWLIFFPFYLVAVNLPYFFE PFLFIAYFYILFRLANKKNRAFSFFNAAFIVLSYDTFHRFFRSVMTKIIDLDSLYHLFLI FFSCEFCRISGSFILSHSCLKKYRP >gi|311100538|gb|AEKO01000007.1| GENE 558 559577 - 560383 665 268 aa, chain + ## HITS:1 COG:SP2236 KEGG:ns NR:ns ## COG: SP2236 COG2972 # Protein_GI_number: 15902039 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Streptococcus pneumoniae TIGR4 # 15 265 184 434 441 154 35.0 2e-37 MTMWTIIMGNHAFLINTFGSTISLVHLLLFLYVAQYLKSQQNTYMVHQEIKRREDENKEL NQFVNKLGSLYDEIRGFRHDFAGIIASLAPVIQERNINEIELVYKDVLLTTNANLQKLDY SAFDLKNIDDLAFRNALAKAMLEAEKQGVTFKCDVPGHIPVVDISMLDMIRILSILLTNA VEAAQEADKPLVEVAITNKNNVITVMIYNTRSKIPLNKRRIWEKGVSSKGDDRGLGLYNL KKLLGDYPQLSLETKVGQEDFTQIMTIQ >gi|311100538|gb|AEKO01000007.1| GENE 559 560395 - 561144 443 249 aa, chain + ## HITS:1 COG:SP2235 KEGG:ns NR:ns ## COG: SP2235 COG3279 # Protein_GI_number: 15902038 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 1 240 1 241 250 162 38.0 7e-40 MRIIVLEDNIHHQLRLESALYDVAKNLHLHIYVECATTLEEFEDYKQKEAVNQVYFLDLE IDGDRDKGFQIAKTIRETNPYAVIIFTTTLSEAMPLVFKNHVSALDFITKDLPEKNYRAR VKQCLEQVLKHGQKNKHEEILHYSYQGRPGINIPISEILFIQTAEKSHRLVIYTSEFIKE FYGSLSEILQLDTKNHFQRVDRSAIVNVQNIASYDSKTKEVMFFEGTTCPVSRLRLNTLK IRMKELGIL >gi|311100538|gb|AEKO01000007.1| GENE 560 561412 - 561675 146 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLIKNTTELIGIKDPNIIISLVFETDTHMPEKSCSSAFTISLQLAIPILAISQISMRNE KDNRRQLQLSLIRLPLYITLLGQCIIL >gi|311100538|gb|AEKO01000007.1| GENE 561 561814 - 562725 662 303 aa, chain + ## HITS:1 COG:PM1126 KEGG:ns NR:ns ## COG: PM1126 COG1518 # Protein_GI_number: 15602991 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Pasteurella multocida # 1 300 40 338 343 194 36.0 2e-49 MTWRVVHVSQSEKMRLKLGNLLVQKMGQEFTVPLSDISIIVAEGGDTVVTLRLLSALSKY NIALVVCDNEHLPTGIYHSQNGHFRAYKRLKEQMDWSQKQKDKAWQIVTYYKINNQEDVL AMFEKSLDNIRLLSDYKEQIEPGDRTNREGHAAKVYFNELFGKQFVRVTQQEADVINAGL NYGYAIMRAQMARIVAGYGLNGLLGIFHKNEYNQFNLVDDLMEPFRQIVDVWVYDNLRDQ EFLKYEYRLGLTDLLNAKIKYGKETCSVTVAMDKYVKGFIKYISEKDSSKFHCPVVSSLE WRK >gi|311100538|gb|AEKO01000007.1| GENE 562 562727 - 563050 112 107 aa, chain + ## HITS:1 COG:Cj1521c KEGG:ns NR:ns ## COG: Cj1521c COG3512 # Protein_GI_number: 15792834 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Campylobacter jejuni # 6 106 7 107 143 73 41.0 7e-14 MRYEALRLLCFFDLPMESKDEKRIYRNFRKELISNGFEMLQFSVYYRTCPNRSFANKFYK KLKMSNLPAGNVRLLAVTEKQFSEMTLIIGGKTKQEEIVSDNKLVVI >gi|311100538|gb|AEKO01000007.1| GENE 563 563047 - 564099 294 350 aa, chain + ## HITS:1 COG:no KEGG:stu0660 NR:ns ## KEGG: stu0660 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 350 1 350 350 578 89.0 1e-164 MKFFVQHPYKERIELNIGVITQIVGQNNELKYYTWQILSWYFGGRKYSSEDLSIFDYEEP TILDETGEIVKRSSYHYIDISSFKDLLEQMEYKKGTLAHDYLSKVVNQVDIVAHLERINE QVELIEETMNRHINLNCGQVEYHLENRPLTLDQLLTKNFSPFFTIENMNLSFEWVSNTDK LSLFLEMLDRLLSQTTEKYLILLKNIDSFISEDSYDSFYKQIDQLVKKYPNLTFILFPSD QGYLKIDEENSKFVNILSDQVEHLYDVEFMYESVAKHYPSNNFPTREDFRISLETVTPYL LTKMLRQPSLSLVDSVILNILNQLFHFSHRIRYSQTSDEKLLQKFLESKD >gi|311100538|gb|AEKO01000007.1| GENE 564 564569 - 565342 588 257 aa, chain - ## HITS:1 COG:SPy0575 KEGG:ns NR:ns ## COG: SPy0575 COG3689 # Protein_GI_number: 15674664 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 257 15 271 271 345 66.0 6e-95 MYLQVSGKLNQYINIHYSYLAYISMVLSFILAVVQLIVWMKQMKVHSHLSGRVAKVASIV LLAFPVLTGLLVPTVTLDANTVSAKGYHFPLAAGSDPNQADQEGTTIQYLKPDTSSYFTS SAYEKEMTRELAKYKGRETIQITTENYMEVMELIYLYPNDFVGKKVTYTGFVYNDPQTKG YQFIFRFGIIHCIADSGVYGLATTGSDQTFKDNTWVKVTGTITVDYYQNLKQSLPILNLT EVKEVGQPDNPYVYRVF >gi|311100538|gb|AEKO01000007.1| GENE 565 565384 - 566286 760 300 aa, chain - ## HITS:1 COG:SPy0576 KEGG:ns NR:ns ## COG: SPy0576 COG0701 # Protein_GI_number: 15674665 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 300 300 380 70.0 1e-105 MAIFHQLPDSVLQLLAVFLSIIIEALPFVLLGSILSGFIEVFVTPEKVQNFLPKNKVLAI LFGTLVGFIFPSCECGIVPIITRFLEKKVPSYTAIPFMSTAPIINPVVLFATYTAFGNSW YYVILRFLGAFLIAMILGILLGFVVDDQILKDNRKTSHVHDSSGLSAGKKVFQALVHAVD EFFDTGRYLIFGSLVAAGMQTYLPTRILTTIGHNSVTAILIMMLLAFILSLCSEADAFIG ASLLSSFGVAPTVAFLIIGPMVDIKNLIMMKHQFKTRFVGLFVGTASLVTIIYCLLLGVI >gi|311100538|gb|AEKO01000007.1| GENE 566 566292 - 566462 127 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPLVSYVNSEAFYGSYSEKTNELESMMASFAAIPDFEKAGTDPKKDKRIQEDKKK >gi|311100538|gb|AEKO01000007.1| GENE 567 566703 - 568835 1601 710 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|51894064|ref|YP_076755.1| ribosomal protein S1-like protein [Symbiobacterium thermophilum IAM 14863] # 9 703 10 719 764 621 48 1e-176 MENRNLEILAQELGLKKQQVETVLELTAEGNTIPFIARYRKEKTGNLDETQIKAIIDMDK SLTALQDRKETVLAKIEAQGKLSDQLKAAIEAAEKLADVEELYLPYKEKRRTKATIAREA GLFPLARLILQNSPNLKAEAEKLTSEAFPTADKALAGAVDILVEAFSEDNSLRSWSYNEI WNNSDITSTLKDQSLDEKEIFKIYYDFEDKVSKLQGYRTLALNRGEKQGIIKVNFKHNLE KMHRFYSARFKQKNDYIEEVINQSLKKKIIPAMERRIRSELTEAAEDGAIQLFSQNLRSL LLVSPLKGKMVLGFDPAFRTGAKLAVVDQTGKLITTQVIYPVAPASQAKIAQAKKDLADL IKKHAIEIIAIGNGTASRESEAFVAEVLKDFPETSYVIVNESGASVYSASELARHEFPDL TVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSENLDFVVDTVVNQVGV NVNTASSTLLSHVSGLNKTISENIVAYREENGEIASRAEIKKVPRLGAKAFEQAAGFLRI PNAKNILDNTGVHPESYPAVKDLFKQLDITDLDDSAKEKLKALNLKETAEELGLGQETLK DIIADLLKPGRDLRDDFEAPVLRQDVLELKDLSVGQKLEGTVRNVVDFGAFVDIGVHEDG LIHISEMSKSFVNHPSQVVSVGDLVTVWVSKVDLEHEKLNLSLVNPRESN >gi|311100538|gb|AEKO01000007.1| GENE 568 568828 - 569025 167 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTELVADDFSKGLKAMFLIEFWVEIQVSILGKEPPSSGPETLVPQGLMLKFPAKIFYRNS LNIIS >gi|311100538|gb|AEKO01000007.1| GENE 569 569327 - 569590 336 87 aa, chain + ## HITS:1 COG:SPy0583 KEGG:ns NR:ns ## COG: SPy0583 COG1983 # Protein_GI_number: 15674670 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 87 1 90 90 82 57.0 2e-16 MSNRFYKTRKNRLVAGVVAGLADKFGWDLALARILAIILMVSTQFGIFLYLVLAFLLPYK EDIYPEIKLKDGRKRKNAEPVEDEWNW >gi|311100538|gb|AEKO01000007.1| GENE 570 569718 - 570647 1200 309 aa, chain + ## HITS:1 COG:SPy0584 KEGG:ns NR:ns ## COG: SPy0584 COG1493 # Protein_GI_number: 15674671 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Streptococcus pyogenes M1 GAS # 1 306 1 306 310 494 81.0 1e-139 MTVTVKMLVDKLKLKVVYGNEKLLSKPITTADISRPGLEMTGYFDYYSPERLQLVGMKEW SYLKTMTDNNRYSVFANMFKAETPAVIVARGLEIPEEMLQAAKENGVAVLQGRNGTSSLS GDMSWYLNSQLAERTSVHGVLVDIYGMGVLIQGDSGIGKSETGLELVKRGHRLVADDRVD VYAKDEETLWGEPAEILRHLLEIRGVGIIDVMSLYGASAVRNSSQVQLGIYLENFENGKV FDRLGNSNEEIELQGVKIPRIRIPVKTGRNVSVVIEAAAMNYRAKQMGFDATKTFNDRLT NLISKNGEE >gi|311100538|gb|AEKO01000007.1| GENE 571 570647 - 571438 868 263 aa, chain + ## HITS:1 COG:SP1412 KEGG:ns NR:ns ## COG: SP1412 COG0682 # Protein_GI_number: 15901266 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Streptococcus pneumoniae TIGR4 # 5 259 2 255 262 332 68.0 4e-91 MLATIDPIALRLGPISIHWYAICIVSGLLLAVYLAQRWAPEKGIDPEHILDFILLAFPIA IVGARLYYVIFQWSYYSQNPSEIFAIWNGGIAIYGGLIGGAVVLYWFAKRHAISVLDFLD IAAPGVMIAQSIGRWGNFVNQEAYGKAVSHLNYLPEIIRQQMFIDGSYRVPTFLYESLWN LVGFSIILGLRRFNKGLRQGDVTSFYLIWYGLGRFVIEGMRTDSLMFAGLRVSQWVSISI IILGAILLYFRKQRQKADYKMKS >gi|311100538|gb|AEKO01000007.1| GENE 572 571560 - 571958 610 132 aa, chain + ## HITS:1 COG:SPy0587 KEGG:ns NR:ns ## COG: SPy0587 COG4768 # Protein_GI_number: 15674673 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain # Organism: Streptococcus pyogenes M1 GAS # 4 131 6 133 135 126 58.0 9e-30 MAEIAFLIIAIALAAFLIALIPTLLRTRHVVKEVEETVAVLRTDINVTLHQTNEILAKAN VLVEDVNEKVQTIDPLFVAVAELSESVSDLNTEARYLGAKASAAGASVGKAGSAFAIGKV ASKLFGKKDKKK >gi|311100538|gb|AEKO01000007.1| GENE 573 571971 - 572411 744 146 aa, chain + ## HITS:1 COG:no KEGG:STER_0722 NR:ns ## KEGG: STER_0722 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 144 1 144 146 155 95.0 4e-37 MSKFLNTLIIGAASGAAAAYFFTTEKGKAVKARIDEEIASFKEDPKTYQNQVVEKASDYK ELAVDTFQDYKTKFENGDITVDDLTKAVQEKTAQVADFAKESFELIKEKTAQVTPEQADV EAETKAIVDDIVIDIKDISEEVAEVK >gi|311100538|gb|AEKO01000007.1| GENE 574 572564 - 572788 113 74 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 63 1 63 422 69 57.0 1e-12 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKTLK SLFSNKLELQLYYV >gi|311100538|gb|AEKO01000007.1| GENE 575 572830 - 573552 342 240 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 234 90 327 422 273 61.0 2e-73 MAETSIVEKNCQISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDK LPAVMSWDEFGFKKGKLAFVAQNYETNELITILDNRRQTTIRNYFLKYPLKARQQVQFIT MDMSGAYIPLAKKLFPNAKIVLDRFHIIQHLGRAFLKTRIATMNQFDKKSLPYRALKNHW RLFQKDSRKLSLNSFYSKTFRQTLAPHEVVEKTLGFSKELTDYYTLYQLLLFSLSGEESR >gi|311100538|gb|AEKO01000007.1| GENE 576 573888 - 574184 387 98 aa, chain - ## HITS:1 COG:no KEGG:str0670 NR:ns ## KEGG: str0670 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 98 1 98 98 166 88.0 2e-40 MADNLHRQFDHIEDFETERPQTTNYQDYQGLNNNSIKLQDMIFFGRISSFCVSTVLVAFL FLVAQVASFWAFFWAITISVIGQIGIYVLIEYYKAQKR >gi|311100538|gb|AEKO01000007.1| GENE 577 574422 - 575351 1026 309 aa, chain + ## HITS:1 COG:SP0801 KEGG:ns NR:ns ## COG: SP0801 COG0826 # Protein_GI_number: 15900694 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Streptococcus pneumoniae TIGR4 # 1 309 48 356 356 471 73.0 1e-133 MEKIVITATAESYEQACELLELGVDRIYIGEKAFGLRLPKPFSFAEMRKIAELVHESGKE LTVAVNALMHQGMMDALPDYLDFLEEIKADYITVGDAGVFYICNRDKRPFKMIYDASTMV TSSRQINFWGKQAGASEAVLAREIPSAELFVMAENLQIPAEVLVYGASIIHHSKRPLLQN YYNFIKTDEAVTKERDLFLSEPGDPESHYSVYEDMHGTHIFANNDLDMMTKLSELVEHGF DHWKLDGVYCPGENFVKITEYFVKARDLIEAGEFSQDQAFLFDEAIHKLHPANRGLDTGF YDYEPDRVK >gi|311100538|gb|AEKO01000007.1| GENE 578 575447 - 576733 1322 428 aa, chain + ## HITS:1 COG:SPy0591 KEGG:ns NR:ns ## COG: SPy0591 COG0826 # Protein_GI_number: 15674677 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Streptococcus pyogenes M1 GAS # 1 427 1 427 428 764 84.0 0 MTTTKKRPEVLVPAGTLEKLKVAVNYGADAVFVGGQAYGLRSRAGNFTMDELREGIEYAH ARGVDVHVASNMVTHEGNEKGAGEWFRELRDMGLDAVIVSDPALIEICSTYAPGLNIHLS TQASATNVETFHFWKQYGLTRVVLAREVTMEELAEIRKRTDLEIEAFVHGAMCISYSGRC TLSNHMSDRDANRGGCSQSCRWKYDLYDMPFGQERKSIHGEVPEEYSMSAVDMCMIENIP DLIDNGVDSLKIEGRMKSVHYVSTVANCYKAACDAYMESAEAFYAIKDDLINELWKVAQR ELATGFYYKTPTENEQLFGARRKIPQYKFVGEVVDFDPATMTATIRQRNVILEGDHVEFY GPGFRHFECEIKDLHDANGNKIDRAPNPMELLTITVPQEVKPGDMIRSTKEGLINLYQKD GSSKTVRA >gi|311100538|gb|AEKO01000007.1| GENE 579 577096 - 577635 197 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 4 178 3 179 190 80 32 2e-13 MTQNRTLSLILPAFGAAIIAALAQIIIPIGAVPITLQTFAVGLVAAVLKPRESTLAATLY LILGAIGLPVFAGGGGGLQAFFGPSAGYLLAYPFFALVTSVLTHANTPIWKIFLAFVLGD ALVFVGGILSLHFLGKMGWSAAVAVGLTPFIIPDLIKGLIVALVTKPVLKALKNHSYFN >gi|311100538|gb|AEKO01000007.1| GENE 580 577731 - 578015 206 94 aa, chain - ## HITS:1 COG:no KEGG:str0675 NR:ns ## KEGG: str0675 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 94 3 96 96 144 89.0 1e-33 MINFLEAVKHQLHQFVETGHSKPIHLMQNHLINDIYRAIDNNQMVMLTSNQKIYKGYINR YDSQRQAIFIEQDKVISMIELKGIKRLKIISQRG >gi|311100538|gb|AEKO01000007.1| GENE 581 578140 - 578352 341 70 aa, chain + ## HITS:1 COG:SP0782 KEGG:ns NR:ns ## COG: SP0782 COG4443 # Protein_GI_number: 15900675 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 69 9 77 79 117 86.0 7e-27 MAEFSFEIEEKLLVLSENDKGWTKELNRVSFNGAPAKYDIRTWSPDHTKMGKGITLSNEE FQVLVDAFKN >gi|311100538|gb|AEKO01000007.1| GENE 582 578386 - 579720 1397 444 aa, chain - ## HITS:1 COG:SA0956 KEGG:ns NR:ns ## COG: SA0956 COG1914 # Protein_GI_number: 15926690 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Staphylococcus aureus N315 # 5 444 10 445 450 416 53.0 1e-116 MTSLKKVSLSEVNQSIDTPNNNRFWQNLKAFLGPGALVAVGYMDPGNWITSVVGGATYKY SLLFVILISSLIAMQLQQMAGKLGIVTQMDLAQATAYHSPKWLRYTLWVVLELALMATDL AEVLGSAIALNLLFGIPIMVAILVTVLDVFLLLLIMKLGFKKIEAIVSTLILTILVIFVY LVVLSEPSITGILEGYLPTPTLFETHAAGHTNQLTLALGIVGATVMPHNLYLHSSLSQTR KVNHSDGDDVTKAVRFMTWDSNIQLTLAFVVNSLLLILGAALFFGHASDISAFSQMYNAL QDSKIAGAIASSTLSTLFALALLASGQNSTITGTLTGQIVMEGFLHMRLPQWVIRLFTRL FALLPVIVVAILYGDQEKTLDQLLVYSQVFLSLALPFSIFPLIYYTSKKSLMGKHVNAKW NTFLGYAIALVLTILNLKLIFDTF >gi|311100538|gb|AEKO01000007.1| GENE 583 580044 - 580223 204 59 aa, chain + ## HITS:1 COG:no KEGG:str0678 NR:ns ## KEGG: str0678 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 59 44 102 102 95 89.0 6e-19 MERLKNPGMTGDYIGLWKSRWHEENKAWLYPAKQYAIYAEVALACLSAWIAASKAKFWK >gi|311100538|gb|AEKO01000007.1| GENE 584 580260 - 580625 216 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLQTNKRAAFHLSIFVAWLAKHDFLNPQSDGFNLKGIQKLKNETITGTDYLFKHLDKKLY STDISDILLPFISDFYEDFMDFYYTVLVDDVARTEFDWKIYHLVEDDIDEMFSQYQTHIR Q >gi|311100538|gb|AEKO01000007.1| GENE 585 580859 - 582349 2100 496 aa, chain - ## HITS:1 COG:SP0713 KEGG:ns NR:ns ## COG: SP0713 COG1190 # Protein_GI_number: 15900610 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Streptococcus pneumoniae TIGR4 # 6 496 1 491 491 912 93.0 0 MSNQHMEELNDQQIVRREKMAALAEQGVDPFGKRFERTATSGQLKEKYADKTKEELHEIN ETATIAGRLMTKRGKGKVGFAHIQDRDGQIQIYVRKDAVGEENYEIFKKADLGDFLGVEG EVMRTDMGELSIKATHITHLSKALRPLPEKFHGLSDVETIYRKRYLDLISNRESFDRFVT RSKIISEIRRYLDAQGFLEVETPVLHNEAGGAAAKPFITHHNAQNIDMVLRIATELHLKR LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADFHDIMNLTEGIIQHAAKVVK GDGPINYQGTEIKINEPFKRIHMVDAIKEITGVDFWQDMTLDEAKAIAAEKNVPVEKHYT EVGHIINAFFEEFVEETLIQPTFVYGHPVAVSPLAKKNPEDPRFTDRFELFIMTKEYGNA FTELNDPIDQLSRFEAQAAAKELGDDEATGIDYDYVEALEYGMPPTGGLGIGIDRLCMLL TDTTTIRDVLLFPTMK >gi|311100538|gb|AEKO01000007.1| GENE 586 582577 - 583875 1192 432 aa, chain + ## HITS:1 COG:no KEGG:STER_0734 NR:ns ## KEGG: STER_0734 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 432 1 425 425 552 89.0 1e-156 MKKKNYVGKAVMLGALLAPIGLPTVSVLADGFYQNQTSAHAADITNWIASTPQQITNNLT TQNINPQQLDGQKYVIQWGDTLWGISQATGISIEKLAYDNNIQNIDLIFAGDVLILKRDG DVPAGYHVTGNGHRCAHSKIVINNYYGDNNRVIINNSTFVSDDHSKNTMIYAPDNSDNSI SFSNTNNSDKDKDSKESKESSSSSSESKDASSSSTSSSSSSESKDASSSSTSSSASSSTA SDSESKASTDTSKEKELTEDAFQDKVQEEVSNIYQQKRSGRPTWKFFSHVDDKNDLNADA KKDTERTALYRQGETAKDEDIANGPKDGARTEANAKALAEKIYDTLNKGGKMSELIKAKY AQIKVTYKGDKWTFNVDVYKEKESSSSSTETSSESKASSSDDSQTETRMSSSSSSRTETD SEANSSDLTGDE >gi|311100538|gb|AEKO01000007.1| GENE 587 583889 - 584368 531 159 aa, chain + ## HITS:1 COG:no KEGG:stu0695 NR:ns ## KEGG: stu0695 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 159 9 167 167 295 99.0 2e-79 MSKRNIIISVVLACLLVTGAGFSVFYYWGSHHLDSVVPGKVYQYSSSLNGEVNNRVMYVA FQEGGNKALVSQDRTTVVNAAKSQTDFDKAYSDQTAKWEYNVTKTTLTLGKKEDNQLSQW QYNKVFAYGDHFTSKDFYYQIAKGGQGEVKQKMTFKEIK >gi|311100538|gb|AEKO01000007.1| GENE 588 584691 - 585593 981 300 aa, chain + ## HITS:1 COG:SPy0596 KEGG:ns NR:ns ## COG: SPy0596 COG1011 # Protein_GI_number: 15674680 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Streptococcus pyogenes M1 GAS # 1 300 1 300 300 566 89.0 1e-161 MITSIVFDVDDTIYDQQAPYRIAMEKCFPDFDITHMNQAYIRFRHYSDIGFPRVMAGEWT TEYFRFWRCKETLLEFGYREIDEETGNHFQEVYEHELENITMLDEMRMTLDFLKEKNVRM GIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTL YVGDSYDNDVMGAFNGGWHSMWFNHRGRSLKPGTKPVFDLEIDSFEQLFGAVKVLFDLPN NKYIFDINDKENPVLQLGINNGLMMAAERLLESNMSIDKVVILLRLDANQEKILRMKYGR >gi|311100538|gb|AEKO01000007.1| GENE 589 586170 - 586808 657 212 aa, chain - ## HITS:1 COG:SP0984 KEGG:ns NR:ns ## COG: SP0984 COG0406 # Protein_GI_number: 15900859 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 204 1 204 206 256 61.0 3e-68 MKLYFVRHGKTEWNLEGRLQGSKGDSPLLKESIEQVRELGHYLSDTHFDLVFSSDLPRAK KTTELIMESQKPKSKVTYTKALREWQLGKLEGQKIALVQAIYPKEMDAFRHNLANFRAND FQAESVYQTTKRVAEFVKTLKDSEAKNVLIVGHGANLTASIRTLLGFKPGLLRKAGGLDN ASVTILETNDFEHFTLKCWNDTSYMDEQNKIN >gi|311100538|gb|AEKO01000007.1| GENE 590 586811 - 587284 621 157 aa, chain - ## HITS:1 COG:SPy0599 KEGG:ns NR:ns ## COG: SPy0599 COG2606 # Protein_GI_number: 15674682 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 157 1 157 159 209 71.0 2e-54 MAKKGKVKKTLVDQILDKAKIDHDSLFFNGLEGELPEDVARESIYKTLALKGDKTGPVIG IVPITEHLSEKKLAKISGNKKVQMIPQKDLQKTTGYVHGANNPVGIRQKHNFPIYIDQSA QEAGFLIVSAGEIGRSIRINSQELADFVNAEFADIKE >gi|311100538|gb|AEKO01000007.1| GENE 591 587399 - 588301 855 300 aa, chain - ## HITS:1 COG:SPy0601 KEGG:ns NR:ns ## COG: SPy0601 COG3757 # Protein_GI_number: 15674684 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Streptococcus pyogenes M1 GAS # 1 279 1 278 282 370 66.0 1e-102 MRKRIKPIVVYVVLALLGLALVIANIHNTSKQQAHLENVKSAIPSATTPKTTTSSTSDSS DEELILNPIIDLSGWQLPQDIDYDVLSNHISGAIIRVFGGSQISKDSNAASSNGVDKSFK THIKELKKRDVPVAVYSYAQGTSVKEMKEEARIFYKNASPYKPTYYWIDVEEETMSNMEE GVQAFRAELKRLGAEKIGLYIGAYFMLEQEVSTKNFDAVWIPAYGADSGYYEALPNTEID YDLHQYTSQGNLPGFNNILDLNQINPEKNKRKTFEKLFGKIKKKTTKNKKTTSTNSSSSD >gi|311100538|gb|AEKO01000007.1| GENE 592 588493 - 588882 370 129 aa, chain - ## HITS:1 COG:no KEGG:str0700 NR:ns ## KEGG: str0700 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 129 1 129 129 219 88.0 2e-56 MNDLKTLLNHLPYKLAAYDVTGTFLYDNDGADGSFFPREPENLPDWIMSEVLASPTKERS YQIPTDSFDQILIQTYQAAIDNEGKVLGFWETIYDLKQPLKTYLDNSAQALAAWSDTTSG ASFKEKADK >gi|311100538|gb|AEKO01000007.1| GENE 593 589034 - 589270 282 78 aa, chain + ## HITS:1 COG:Cgl2568 KEGG:ns NR:ns ## COG: Cgl2568 COG0561 # Protein_GI_number: 19553818 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 1 70 1 70 271 98 58.0 3e-21 MSKLIFLDVDGTLVDYHNHIPESAVKAIRQARENGHLIYVCTGRSKAEMQPELWDIGLDG MMGGNGSYVEHHGQIPYA >gi|311100538|gb|AEKO01000007.1| GENE 594 589263 - 589877 746 204 aa, chain + ## HITS:1 COG:Cgl2568 KEGG:ns NR:ns ## COG: Cgl2568 COG0561 # Protein_GI_number: 19553818 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 2 203 78 269 271 139 42.0 3e-33 MHELISKEDAAKVVDWLTERYLAFYLESNNGLFASSDFQERARETLKTYAIQKGQSEESV AGKKPEDFLHGLQYSGELYRDELNKVSFVLESYQDHLDSKEAFPQLEAHTWGGRGETALF GDLGVKDINKAHAIDVLLEYLGAKRSDTIAFGDAKIDIPMLEYCEVGVAMGNGGPEILAM ADFVTDDVESDALYKAFDKLGLLQ >gi|311100538|gb|AEKO01000007.1| GENE 595 589915 - 590541 589 208 aa, chain - ## HITS:1 COG:no KEGG:str0701 NR:ns ## KEGG: str0701 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 208 1 208 208 360 96.0 2e-98 MTISRFYRILLALCGFVGVSIQIHDDGWGMLLYYTVLSNILVFSSLIFFIFYDFKKGDAT TNTKLLRYKGGVTMAILITGVIYHILLAPITEPEKYWTVRNFLVHYIVPWGLVLDTLTFD AKKAYRLREPLYWSLFPLSYFAFALLNGLVLKLAIPGAKDSPFAYFFINVNKFGWNKVMI NVLVISAGYIAVGYLLYLLKKFIGRKPA >gi|311100538|gb|AEKO01000007.1| GENE 596 590652 - 591809 688 385 aa, chain + ## HITS:1 COG:no KEGG:GALLO_0904 NR:ns ## KEGG: GALLO_0904 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 374 1 382 395 308 43.0 2e-82 MPNLIDYLEKVKELTFDQEPLNILDKVCINEIGYLTYEKWLTASDLQKTINLHDYAEGKV LNPEYTFMVTKERVELAEAMVRSRRFAGLNLSNYCSVLDKEVEKQFAAMIFSLPELDYQQ LVFRGTDDSVIGWKEDFQLTYSREIPAHRSAIAFLSEHLPNLSGHVTVSGHSKGGNLALY SAVQSSTALREQIAELLLLDSPGLMKSLLVKPSYQELKPKMTLIRPQDSVVGVMLYWDQD AQLVAAEGIGIAQHNALLWQVDLEGSDFVYVDQPTDLSQRLKETFQEWIETLPNQQLKLV CDLFFDTILDSGIESLDDIGVKTLPKLGQLLQEFGNLTDQQKKILQDGFNQLLWIFWKSG NKKSSLPKLELPDFIKKLGELTNND >gi|311100538|gb|AEKO01000007.1| GENE 597 591841 - 592605 251 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 216 3 222 259 101 33 9e-20 MPKNVLITGATSGIGEATARAFAKEGENVILTGRRVERLQALKEELQATYPNQKVWTFAL DVTDMDMVKDVCQAILKSVGQVHVLVNNAGLALGLTAYQDYEEWDLLTMLDTNVKGLMMV TRQILPSMVAANEGHIINMGSTAGIYAYAGAAVYSATKAAVKTFSDGLRIDTIATDIKVT TIQPGIVETDFSQVRFHGDKDKAAKVYQGLEALQAQDIAEAVLYVTKQPRRVQISDMTIM ANQQATGFTIHRGE >gi|311100538|gb|AEKO01000007.1| GENE 598 592726 - 595716 2379 996 aa, chain + ## HITS:1 COG:SPy1904 KEGG:ns NR:ns ## COG: SPy1904 COG0610 # Protein_GI_number: 15675717 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Streptococcus pyogenes M1 GAS # 7 993 8 990 992 1092 58.0 0 MPAVTPELEIERQLIEQLTSGESQWSYRPDLKNEDQLWDNFFEKLAQNNVALLADHPLTE QEKRQIKNQLNFINYYEAAKWLAGENGIAKVEVQREDASLGTIRLSVIWRDNIAAGKSSY EVVNQVERDKAYPQDQDRRLDTTLMINGLPLIHIELKSPRVAFLDAFHQIKKYDREGKLR GIYSALQMFVVTNKVDTRYIAAAREDKLNKQFLTSWVDKDNKPMTSLMNFAHEVLSIPRA HQMVMQYSVIDDSKKALILLRPYQIHAIESVQDASRRQESGYIWHTTGSGKTLTSYKVAR NLLQIPAIQKTIFVVDRRDLDQQTTSSFLSYAANDVIDIDETDSTHDLVKRLAGNDKRVI VTTIQKITTMMRKFQEGKYQKDSEKIKDLRVAFVVDECHRAVTPQTQKDIKGFFHNSLWY GFTGTPIFKENKRKQLGDLAQTTHQQYGERLHEYTVKEAIHDGAVLGFKVDYRNTIISPI SEEDLPDSVYEDKEHMLEVLDAILNKSYQQLGFPNGVGKTYEAILTVKSIPQAQAYYNLL KSIKAGQERVKVSERVKRVLLDFPKVTVTYSVSENEEESIGYQDHMKQVMDDYNQEFGTH FNIADLRGFNTDINNRLARKLDKYIPRNEQLDLVIVVDRLLTGFDAPCLSTLFIDRKPMR PQDLIQAFSRTNRIFDSKKRYGHIITFQRPEAFKEAVDNALRLYSNGGENDVTAPDWAEE KANFIQAWIDFQVKVEDVENYVITIEQATSPQLRRIAKAYQTLDKYLASIRVYSEYDEAA IYAETGLSDEKLESYLGIYQNILAELKSRAEDDGDDNLFDIHYELESVQVDEINYAYILT LIQSMIQQEEDSPQSLSDKDIETVDNYIQSLERTNPKLAEIIRNLWKEVQANPKDYQGQS ITGVLDTMIEAIIDDHLKRFAREWYVGLDELRYYVQHYRKGAKKQSGESQLTKSQRYKDY KAETADALNPLSYKKHIKEAYTKLIEEVIEPLRVGR >gi|311100538|gb|AEKO01000007.1| GENE 599 595752 - 596183 257 143 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_0531 NR:ns ## KEGG: SmuNN2025_0531 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 2 132 4 135 340 127 55.0 1e-28 MVEKFDIKQLRYFAMTKRLNFLIGSGASVPAIPLMSSFRSNDISDEEANNFLSDKIKEVS KKVLEDTSKASDEENIKAVLKRYSEFIKVILQLLYHANSRQVTKNINIFTTNYDLFIEKS LDELMKYESFVLMMEVMGILTGF >gi|311100538|gb|AEKO01000007.1| GENE 600 596408 - 596746 189 112 aa, chain + ## HITS:1 COG:no KEGG:SmuNN2025_0531 NR:ns ## KEGG: SmuNN2025_0531 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 109 223 331 340 126 59.0 3e-28 MLRVFQLELDKPQSILIVIGFSFQDKHIAKMLNRSLKNPELNVFIFCYSESDKQIILTNL SLSDCPRNLNVITPNELEEKYTSKNISKDGSDWFSFDLSNLTKLLSDMSFEE >gi|311100538|gb|AEKO01000007.1| GENE 601 596752 - 598548 901 598 aa, chain + ## HITS:1 COG:PH0932 KEGG:ns NR:ns ## COG: PH0932 COG0433 # Protein_GI_number: 14590784 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pyrococcus horikoshii # 479 594 405 513 555 73 37.0 1e-12 MKSNIKKLGVIVGVDGDISQVGMYHLSNDAEYLWYGDVLQGAKIGAYLTILQNNVKIIAS VVTEKVADQQNTIRSTEFDNRFSKNSINRIVHLKTKGVIENGEFQVTSQYVPMIGNEVCI TSKKDLELIYGINDEEPTISIGKSILEGQVVPLSINKIFASHIGVFGNTGSGKSNTLHKL FLELFRSEYQEKILEHSKFYVIDFNGEYTKDDSFGVANQKRVFEINTKNLTSTKLPITSD YLFDPDILSILFGATSATQVPFLRKSLKIWNERQFNGESISHFVVGTLKRILTTGNSASL DSKDNWITIAEKYIDNDLFDVLKSNLHYNYNTEAYYTVVNGNNNYIINPNTPIADFEIKY LKIDEIERNLKFKFDSLSEFDKLKFHLDFQKVHQSAWKSTNIEHINPLFHRIDTALNSLK KVVEVKDSIEGDFSSLNIINLVHANQEITRLIPMLISKMVYDQQKTKIAGNDVTCTSHLI IDEAHNILNAQNHSVGDTWQDYRLNIFEEIIKEGRKFGFYLTLSSQRPADISPTILSQVH NYFIHRLVNDNDLRMLVNTMPTLDKTSFNKIPSLGKGEVIITGNAIQVPVFVKVDKEK >gi|311100538|gb|AEKO01000007.1| GENE 602 598764 - 599942 470 392 aa, chain + ## HITS:1 COG:no KEGG:SE0041 NR:ns ## KEGG: SE0041 # Name: not_defined # Def: Abi-alpha protein # Organism: S.epidermidis # Pathway: not_defined # 9 334 15 336 384 125 29.0 4e-27 MELLHLGVEGEYWDFKEKPYFFEGQSDKDKNKKKGDLLHDIICMANNLSNRDAFIIMGIQ DKPVKITGVKQFSNKWTQESYQDFLQNLTWAGDMIPIVEFRTIHNGELDVLIIKKSNRVP FYITKNYGKVRENRIYVRKGSKNTAIDSQAEIGDIEKLFEFRFGLTPYPKERVINYISDH GHWIEMKEDYETRSWYYEKFPEYTIELSRDPDNETLASPDYAYVQMNCKSSWQILRVKYH QTTLMEYTAHYVDETRGIVISPKDDYIRLSNDNTMPMIKHFYYYLEDSIEIKLMYLLKML MNHDNIALDNHLFLIPVFNSSEEKSNIEFLINHNNEDFISRIGNEIQNIVINYGSGLSEE SKLFVREDLTVTKVVKTILTEYRAKKVYEKTK >gi|311100538|gb|AEKO01000007.1| GENE 603 599926 - 601155 714 409 aa, chain + ## HITS:1 COG:SA1625 KEGG:ns NR:ns ## COG: SA1625 COG0732 # Protein_GI_number: 15927381 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 3 409 5 409 409 155 29.0 1e-37 MKKQSNTPKIRFHNYKELWECDDLKNIFGTIRNAFVGTATPYYVEKGHFYLESNNVKNGK INYNSQIFINDEFYEKQRDKWLKTNDIVMVQSGHVGHTAVIPKELNNTAAHALIVFTDYK KEVNPHFLNYQFQSSSKRKKLDLISTGNTIKHILASEMKSFKMDFPTVEEQSAIGSLFRT LDDLLTSYKDNLANYQSLKTTMLSKMFPKAGRTVPEIRLDGFEGEWEVVNLGTLIENYDE VISGTSGFPIATSSRKGLYLQNDYFEGGRTGIDLTLDFHRVPIGYVTYRHMSDDSIFKFN KNNFETDVLVSKEYPVFISNDSSDIDFLLYHLNNSRLFLRFSTMQKLGGTRVRLYYKNLI TYKIAVPTVKEQQAIGAYFSILDNLIATHQEKISQLETLKKKLLQDMFI >gi|311100538|gb|AEKO01000007.1| GENE 604 601167 - 601754 252 195 aa, chain + ## HITS:1 COG:no KEGG:STER_0751 NR:ns ## KEGG: STER_0751 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 194 1 194 195 361 96.0 8e-99 MTSLFENFQFTLVMYSALFSLVGSFIGFLLQTAVQYYISSRGSVNVYVKSVFNKVTQNSW GFHHSGIGLTFDVPLWVEIHNTKSKRQIIRNMNLVLYSKGTPVTKMIQYSGFEQDGKSYQ YGENGAYSFLLDSYELKRYDLDFGISYDAVGCEFDEVWISYYDFKDRYHKSKLFDVKDPW TITKNEIDDDWRKIS >gi|311100538|gb|AEKO01000007.1| GENE 605 601782 - 602045 306 87 aa, chain + ## HITS:1 COG:no KEGG:STER_0752 NR:ns ## KEGG: STER_0752 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 83 1 83 250 145 87.0 4e-34 MVSVTQCIKQIKQPHGGYLSVKAFTVTTLDDGHVLNAEESIAASLVGTAVDYLSRFMDGT AVEEAFEISLLGARAMRMEAKAYWSSG >gi|311100538|gb|AEKO01000007.1| GENE 606 602089 - 602319 112 76 aa, chain + ## HITS:1 COG:no KEGG:STER_0752 NR:ns ## KEGG: STER_0752 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 76 103 178 250 134 88.0 8e-31 MAGFDSAFRVGPLAYRPVESIASNQATIANIRIMVESSLSFFKVFGPVTADGFTMEGAYT ATITTGDGDFLTKNTL >gi|311100538|gb|AEKO01000007.1| GENE 607 602578 - 604182 2088 534 aa, chain + ## HITS:1 COG:SPy1906 KEGG:ns NR:ns ## COG: SPy1906 COG0286 # Protein_GI_number: 15675719 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pyogenes M1 GAS # 6 528 3 524 526 708 68.0 0 MSETTQTSQSLYQALWNSADVLRSKMDANDYKSYLLGMVFYKYLSDKMLFFVAETMEEET ESLEEALAVYRKYYEDEETHEDLLSVITDEMSYAIHPDLTFTALVERVNDGSFQLEDLAQ GFRDIEQSDELYENLFEDIDLYSKKLGATPQKQNQTVAAVMKELAVLDVAGHAGDMLGDA YEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAK RYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH GVLFRGNAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKNRTNRDVYFIDAS KEFDKGKNQNIMTDAHIEKILDAYKSREDMDKFAHLASFEEIVENDYNLNIPRYVDTFEE EEVEPLTEIVTKINQTNATIESQTASLLDMLGQLHGTTPEADEELKAFVEAFKG >gi|311100538|gb|AEKO01000007.1| GENE 608 604260 - 605195 734 311 aa, chain + ## HITS:1 COG:no KEGG:smi_0034 NR:ns ## KEGG: smi_0034 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 4 310 4 323 323 219 40.0 1e-55 MEKRHKHVSPTLNIMAKKIFSLPEVTVAFIRDILDLDVVDAQILEGTQLHKKDFDEDELF STSVDVRAKLNDGTEVIIEIQVRKQHYFLNRFHYYLANQLVENVQQLRQQGQTHKMYEQM EPVYGIAILEKTLLPDEESPINTYWMANSRTGRPLNAYYKDGKRQNLLQIAFLELDKYNK DKHIRDEGRQWLEFFGNLPFSMAPSQAVTHADSLLDSSSWTQEEKAMIDERIRIQENYDM TMETAIDEAREEGIEKGLEQGLERGLKQGLERGRHEERLELIRKMFSKGLPLEVVSDVTG LSLEELEALLA >gi|311100538|gb|AEKO01000007.1| GENE 609 605446 - 606447 747 333 aa, chain + ## HITS:1 COG:no KEGG:stu0713 NR:ns ## KEGG: stu0713 # Name: not_defined # Def: deoxyribonuclease # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 333 2 334 334 612 95.0 1e-174 MKEKRNSRICLFALLLLVFTLGFGFSVDTSKQSLAVSSQVVQADENNGILAFNGQKQFVM EEKDQLGRAHSAHIQLQDKDEPKNKRPGKIKYDPVGWHNYKFYYGDGKSKSWLMNRGHLI GYQFSGVNDEGKNLVPMTAWLNSGNYKGTDEGNQSGMLYYENRLDNWLALHPNYWLDYKV TAIYSGEELLPRQVELQYVGIDGSGNLLEIKLGGDKETLDSQGVTHVILDNQSPNAEINY VDGTATNTVTEFTEAPSEPSSESSQVTEQPSSEPEPVQPAQEESRTVYVARHGTADVYWY DINSMPSNTNKANVVTMTEADALVQGKRHTSKE >gi|311100538|gb|AEKO01000007.1| GENE 610 606596 - 607156 741 186 aa, chain + ## HITS:1 COG:SP1284 KEGG:ns NR:ns ## COG: SP1284 COG1704 # Protein_GI_number: 15901144 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 186 186 310 88.0 1e-84 MIWIIIAIIVVLVIFVIASYNGLVKSRMQTKEAWSQIDVQLKRRNDLLPNLIETVKGYAK YEGSTLEKVAELRNQVAAATSPAEAMRASDELTRQVSGIFAVAESYPDLKASANFSQLQE ELTNTENKIAYSRQLYNSVTSNYNVKLETFPSNLIAKMFSFKAAEFLETPEEEKAVPKVD FSGLGN >gi|311100538|gb|AEKO01000007.1| GENE 611 607158 - 608057 854 299 aa, chain + ## HITS:1 COG:SP1283 KEGG:ns NR:ns ## COG: SP1283 COG0501 # Protein_GI_number: 15901143 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Streptococcus pneumoniae TIGR4 # 1 299 1 299 299 444 80.0 1e-124 MLFDQIARNKRKTWLLLLVFFLLLGLVGYGVGYLWLGSGFGGLILALVIGFIYAITMIFQ STNVVMAMNGAREVDEQSAPNLYHVVEDMAMVAQIPMPRVFIVNDPSMNAFATGSSPKNA AVAATTGLLAVMNREELEGVIGHEVSHIRNYDIRISTIAVALASAITMLAGMARNMMFWG GGRRRNDDDRNGSSGLEIILLIISLIAIILAPLAATLVQLAISRQREFLADASSVELTRN PQGMINALLKLDNSAPMQHHVDDASAALFINDPKKESGLQKLFYTHPPISERVERLKQM >gi|311100538|gb|AEKO01000007.1| GENE 612 608175 - 608648 408 157 aa, chain + ## HITS:1 COG:no KEGG:stu0716 NR:ns ## KEGG: stu0716 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 157 1 157 157 213 94.0 1e-54 MKLTIQRMARIAILSALAVGLRSAFIGLPNIQPITAMFFVAVLYLGLLDGLLIMALTMLI SGFIFGFGPWVFNQILAFGILMALWSLIAPRLSLVWQIALVTTLSFLYGVLLDYSYGLLF KSGLTFVVSGLLYDTYHAVSTLLFYPFIQSVFRRFLK >gi|311100538|gb|AEKO01000007.1| GENE 613 608645 - 609040 425 131 aa, chain + ## HITS:1 COG:no KEGG:str0717 NR:ns ## KEGG: str0717 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 131 1 131 131 211 96.0 6e-54 MKKLLIYLALAFSLVTLAACGKNEAAKPTSSTNNHQSKVQGQVTLILKTEKESKKKSVEF KKGDTVLDVLKEIYPVQENDGFITEIDGISQDKEKGIYWMFDVNGKIGEKAANQLKVQDG DEIKFYQEKYN >gi|311100538|gb|AEKO01000007.1| GENE 614 609215 - 612037 2940 940 aa, chain + ## HITS:1 COG:SPy0608 KEGG:ns NR:ns ## COG: SPy0608 COG2352 # Protein_GI_number: 15674689 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 940 1 920 920 1229 69.0 0 MAFNKLESSNNQEIISEEVGILKELLDDATLGMAGEQGLTTIQHLVELYDEGDYVALTQA ISEMTNDDMVVASRYFSLLPLLINISEDVDLAYEVNHKNNIDESYLGKLSETFDVVAESD NARDILENVNVVPVLTAHPTQVQRKTMLELTNHIHELLRKHRDVKAGLINKDKWYADLRR YVEIMMQTDIIREKKLKVKNEITNVMEYYNSSLIKAITNLSHEFKRLAVEKGIELNNPTP ITMGMWIGGDRDGNPFVTAETLKLSATVQSEVILNYYIEKVDNLYRSFSLSSRLTEVSET VAEMAKLSPDTSVYRENEPYRRAFSYIQSKLIQTFLFFKEGNFSKERVAKRLSENVRLGS VSTGEVVADFVQERLSQSLQAVSQQTTEFYETAEAFHDDLLAIKNSLLENDDSVLISGDF EELLQAVEVFGFYLATIDMRQDSSVHEACVAELLKSANIVDNYSELTEVEKVAVLLKELQ EDPRTLSSTNVSKSETLEKELAIFRTARLLKDYIGEEVIKQHIISHTESVSDMFELAILL KEVGLVDTERARVQIVPLFETIEDLENSNEIMKQYLGYDIVKRWIKNSNNYQEIMLGYSD SNKDGGYLSSGWTLYKAQNELTKIGEERGIKITFFHGRGGTVGRGGGPSYDAITSQPFGT IKDRIRLTEQGEVIGNKYGNKDAAYYNLEMLVSAALDRMVTRQIADPEELVDFREIMDGI VHDSNVIYRDLVFGNEHFYDYFFEASPIKEVSSLNIGSRPAARKTITEISGLRAIPWVFS WSQNRIMFPGWYGVGSAFNHYIKAEEGNLEKLQHMFETWPFFRSLLSNVDMVLSKSDMNI AFHYAQLAESEEVRSVFNIILDEWQLTKNVILAIEKHDDFLDESPSLKASLDFRLPYFNV LNYIQIELIKRLRNNNLTDDEISLIHITINGIATGLRNSG >gi|311100538|gb|AEKO01000007.1| GENE 615 612105 - 613139 701 344 aa, chain + ## HITS:1 COG:SPy1407 KEGG:ns NR:ns ## COG: SPy1407 COG1466 # Protein_GI_number: 15675327 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 342 1 342 346 414 65.0 1e-115 MIAMETIEKLTREKLPTITVLVGEDLGQYSQAKEKFLKQIGFDPSDLTYSYFDMSETDYQ DAELDLESMPFFADEKVVIFDHFADMTTAKKSYLDDKALKRLENYLQSPVETTRLVLMAS GKLDGKRRLVKLLKRDALVLEANPLKDAELRTYFQKQAHQEGLIFEKGVFEELLIKSSFD FSDVQKNLAFLKGYKTEGNISSQDIAEAVPKSLQDNIFDMTQLLLRGQIQGVRELVHDLR LQGEDEIKLIAVMLGQFRTYLQVKLLSAQGKSEQQIVSSLSDYLGRKVNPFQVRYAIRDS RHLSVAFLKTTIKILVETDYQIKTGTLDKDYLFDLALLKIASKR >gi|311100538|gb|AEKO01000007.1| GENE 616 613234 - 613839 922 201 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 1 201 1 201 201 359 85 1e-97 MAIILPDLPYAYDALEPYIDAETMTLHHDKHHATYVANANAALEKYPEIGEDLEALLADV EKIPADIRQALINNGGGHLNHALFWELLSPEKQEPTAEVAAAINEAFGSFEAFQEVFTAA ATSRFGSGWAWLVVNAEGKLEVVSTANQDTPISDGKKPILALDVWEHAYYLNYRNVRPNY IKAFFEIINWNKVAELYAAAK >gi|311100538|gb|AEKO01000007.1| GENE 617 613881 - 615314 1404 477 aa, chain + ## HITS:1 COG:no KEGG:stu0721 NR:ns ## KEGG: stu0721 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 30 477 12 459 459 685 93.0 0 MVVKSPCFLGYYSLNYYYYEKKKKYSSEKYGGSRRKTKYKKKDSVKQDLQKDVKRDSKDS KKDVERSYEKNNKKDKKKVSKKSVEKKPVEETSVPVGHKGKEEKTETLSLRSKRSKKSRS KLSRDDKKPYLILSLLGAVVILVFVAMLALAGRGKQAGHTGNLGNIFGSNSKITKKEDKK KEEKVTPTNKSSEAKKAVMEADADTMYSNGLYYDYANMTLNQVVEAFMADQGIESSQIAF SYKNTKTNEQFSMNDTQPMTAGSTYKLPLNMLVMDQVNKGKLSLTERFDITNTEYEYQGE HDNYVAAFGGSMTIPEMQEYSLVYSENTPAYALAERLGGMEKFYGMLDKYGKSKGEVKTI QMHGNKTTTDYYIQVLDYLWKHQDNYKDILHYIGESFPNEYYKTYLPNLTIYQKPGYVRE ALNVDAIVMEDTPYMVAIYTRYLGGSTEESDEISGWGLQQLGMLSYVINEWHRVNMN >gi|311100538|gb|AEKO01000007.1| GENE 618 615355 - 615861 115 168 aa, chain - ## HITS:1 COG:SP1808 KEGG:ns NR:ns ## COG: SP1808 COG1989 # Protein_GI_number: 15901637 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Streptococcus pneumoniae TIGR4 # 1 167 48 213 219 87 36.0 1e-17 MIPILSQLFLRFRCRLCQSSIPYRYLFLELFCGGILLLYFYDYLDFGRTYLLLFSLCVTI FDLKNKSYPLLIWIFGTLALLCLGNHYLTFTLGISLAALSYFKRLNIGEGDFLYLASVSL IFPFSKILLAIELACLFGLTYFLVRRNPNETVAFVPFLFVSVLILTFM >gi|311100538|gb|AEKO01000007.1| GENE 619 616111 - 616632 593 173 aa, chain + ## HITS:1 COG:SPy1531 KEGG:ns NR:ns ## COG: SPy1531 COG0783 # Protein_GI_number: 15675430 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Streptococcus pyogenes M1 GAS # 1 172 1 175 175 232 69.0 3e-61 MAHSIKETINETVNHQAETPTNTKTKAVLNQAVADLSVAASIVHQVHWYMRGPGFLYLHP KMDELMDSLNAHLDEISERLITIGGEPYSTLVEFSSNSGLTETTGTFDKSMSDQIQLLVD TYKYLSVLFQVGLDITDEEGDAPSNDIFTAAKSEIDKTIWMLTAELGQAPGLK >gi|311100538|gb|AEKO01000007.1| GENE 620 616721 - 617158 322 145 aa, chain + ## HITS:1 COG:SPy0187 KEGG:ns NR:ns ## COG: SPy0187 COG0735 # Protein_GI_number: 15674392 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Streptococcus pyogenes M1 GAS # 4 145 6 148 155 175 58.0 3e-44 MSDHRHSLGVYEDVLNQLKAKGIRLTESRKAVIRYLMMSDQHPSADVIYYDLLPDNPGMS LATVYNNLKVLVEEGIVSEIKVNNDNTTYYDFMGHDHLNIVCEKCGQITDLDLPIPSFKE EVESQTGFRITREQMILHGICPNCQ >gi|311100538|gb|AEKO01000007.1| GENE 621 617269 - 617475 184 68 aa, chain + ## HITS:1 COG:SPy1530 KEGG:ns NR:ns ## COG: SPy1530 COG4483 # Protein_GI_number: 15675429 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 66 1 66 67 80 78.0 6e-16 MKTLYDVQQLLKQFGIVVYLGKRLYDIEMMKIELEALYQNALIDKENYLIAEMILRREHR IEMEKENE >gi|311100538|gb|AEKO01000007.1| GENE 622 617468 - 618436 1051 322 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 1 316 1 316 319 409 62 1e-112 MSKKLLGIDLGGTTVKFGILTADGEVQEKWAIETNTLENGSHIVPNIVESLKHRLEMYGL TAEDFIGIGMGSPGAVDRENKTVTGAFNLNWAETQEVGSVIEKELGIPFAIDNDANVAAL GERWVGAGANNPDVVFVTLGTGVGGGVIADGNLIHGVAGAGGEIGHIIVEPETGFDCTCG NKGCLETVASATGVVRLAHYLAEGYEGNSSIKAAVDNGEQVTSKDIFVAAAEGDKFANSI VDKVSEYLGLATANISNILNPDSVVIGGGVSAAGEFLRSRVEGYFKRYAFPQVRRTTKVK LAELGNDAGIIGAASLACSIDK >gi|311100538|gb|AEKO01000007.1| GENE 623 618575 - 620425 2261 616 aa, chain + ## HITS:1 COG:SPy1527 KEGG:ns NR:ns ## COG: SPy1527 COG1217 # Protein_GI_number: 15675426 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Streptococcus pyogenes M1 GAS # 1 612 1 612 613 1116 94.0 0 MTKLREDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELDERAMDSNDLEKERGITIL AKNTAVAYKGTRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKAL EQNLTPIVVVNKIDKPSARPEEVVDEVLELFIELGADDDQLEFPVVYASAINGTSSLSDN PADQEHTMAPIFDTIIEHIPAPVDNSDEPLQFQVSLLDYNDFVGRIGIGRIFRGTVKVGD QVTLSKLDGTTKNFRVTKLFGFFGLERREIEEAKAGDLIAISGMEDIFVGETITPTDAVE PLPVLRIDEPTLQMTFLANNSPFAGREGKHVTSRKVEERLLAELQTDVSLRVDPTDSPDK WTVSGRGELHLSILIETMRREGYELQVSRPEVIIKEIDGVKCEPFERVQIDTPEEYQGSI IQALSERKGDMLDMQMVGNGQTRLIFLVPARGLIGFSTEFLSMTRGYGIMNHTFDQYLPV VAGEIGGRHRGALVSIDTGKATTYSIMRIEERGTIFVNPGTEVYEGMIVGENARENDLGV NITTAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLDDDEYMEVTPESIRLRKQILNKA ERDKANKRKKKAAEAE >gi|311100538|gb|AEKO01000007.1| GENE 624 620445 - 620717 265 90 aa, chain + ## HITS:1 COG:no KEGG:str0730 NR:ns ## KEGG: str0730 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 90 1 90 90 107 92.0 2e-22 MFYLIVAILIASFYFFIAPKSVKNTMNLLFVMATLALLLLLAVLSIIKFFSLPGEFFVTV GMLALSYFTLKDFFAMPELNRDKAQQDENK >gi|311100538|gb|AEKO01000007.1| GENE 625 620841 - 622193 1662 450 aa, chain + ## HITS:1 COG:SP0688 KEGG:ns NR:ns ## COG: SP0688 COG0771 # Protein_GI_number: 15900589 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 449 450 709 80.0 0 MKLITQFENKKVLVLGLAKSGEAAARLLAKLGAIVTVNDGKPFEENPSAQALLEEGIKVV CGGHPLELLDENFELMVKNPGIRYDNPMVARALEKEIPVWTEVELAYLVSEAPIIGITGS NGKTTTTTMIADVLNHGGKSGVLSGNIGFPASEVAQSVTNQDTLVMELSSFQLMGIESFH PHIAVITNLMPTHIDYHGSFEGYVAAKWNIQNKMTSDDFVILNFNQDLAKELATQTNAQV VPFSTVEKVDGAYLENGGLYFKGELVMHADELGVPGSHNVENALATIAVAKLSSVSNQAI KETLSSFGGVKHRLQFVDTIDNVKFYNDSKSTNILATQKALSGFDNSKVILIAGGLDRGN EFDELIPDITGLKKMVILGESAPRVKRAADKAGVTHLDAKDVADATRIAFEQASAGDVVL LSPANASWDMYKNFEVRGDEFITTVERLKG >gi|311100538|gb|AEKO01000007.1| GENE 626 622197 - 623267 886 356 aa, chain + ## HITS:1 COG:SPy1524 KEGG:ns NR:ns ## COG: SPy1524 COG0707 # Protein_GI_number: 15675423 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Streptococcus pyogenes M1 GAS # 5 355 3 355 360 513 72.0 1e-145 MAKSKKIVFTGGGTVGHVTLNLILIPKFLKDGWEVHYIGDKHGIEHEQIDKSGLDVTFHS IATGKLRRYFSWQNMLDVFKVGWGILQSIAIIAKIRPQALFSKGGFVSVPPVIASKLLRV PVYVHESDLSMGLANKIAYKFATTMFTTFEQSKALVKTKHVGAITKVGMTRSDNSDQLDE VKEQFDEKLKTVLFIGGSAGAKVFNDFISKTPELIEHYNIINISGDSSLNTLERHLYRVD YVTDLYQPLMDMADLVVTRGGSNTIFELLAMKKLHLIVPLGKEASRGDQLENADYFERKG YARQLQEPELSWETLNHELEQLVEHAETYKEAMAKSEEITSPDDFYKLLVTSISNK >gi|311100538|gb|AEKO01000007.1| GENE 627 623277 - 624401 865 374 aa, chain + ## HITS:1 COG:SPy1523 KEGG:ns NR:ns ## COG: SPy1523 COG1589 # Protein_GI_number: 15675422 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Streptococcus pyogenes M1 GAS # 1 325 1 345 382 170 36.0 3e-42 MAKKDQKSQEKKVLTEWQKRNLEFLRKKETKDSEEMTNKTGVYPEKATSQENKIPVKKKV KKKKRKKVNTTSNIPIAQQNLAGLVIFIAAILIVFSLFFISPWSKQKILTVSGTKNALPE DVKVASGILDTDYITHVFFNQEEVASTVEKTNVWVKKATVTYSFPNQFNIAVKEYPIVAY RQTSNGYVSILENGKTGGTVSTGNLPDKFITLKMDDEKKIEDLVKELNKLDSKIKTNIQI INLTPTKATTDLLTIELYDGNSIRVPLSQLTTKLPYYEKIKSKLSDGSIVDMEVGLYTTT PEVESSKTDKDKKKDKNKTDKKEDKEISDEGQGTTTLSEQNTEEEANAENSDIQGVGNPT VNQDRTLQTSPIQG >gi|311100538|gb|AEKO01000007.1| GENE 628 624526 - 625902 1486 458 aa, chain + ## HITS:1 COG:SPy1521 KEGG:ns NR:ns ## COG: SPy1521 COG0849 # Protein_GI_number: 15675421 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Streptococcus pyogenes M1 GAS # 1 458 1 454 454 648 77.0 0 MARDGFFTGLDIGTSSIKVLVAEFIDGSMNVIGVSNVKSSGVKDGIIVDIDAAAKSIKTA IEQAEEKAGIVIEQVNVGLPANLLQIEPTQGMIPVTSESKEIKDEDVESVVRSALTKSIT PEREVISLVPEEFIVDGFQGIRDPRGMMGIRLEMRGLIYTGPTTILHNLRKTVERAGIQV ENIIISPLAMTRAVLNEGEREFGATVIDMGGGQTTVASMRAQELQFTNIYSEGGEYITKD ISKVLKTSMQIAEALKFNFGNADIGEASETETVQVEVVGENSPVEITEKYLAEIISARVK HILDRVKQDLTRGRLLDLPGGIVLVGGTAIMPGVVEVAQEIFETNVKLYIPNQVGIRNPM FANVISLVEYVGLLTEVDIIAQQAVCGEEYLRRKPIDNEAPTLSFDRTTTSAPRVTPQPN RIPVENTVEVPLPVDEENHEQKQKLGDRVRGIFGSMFD >gi|311100538|gb|AEKO01000007.1| GENE 629 625931 - 627253 1501 440 aa, chain + ## HITS:1 COG:SPy1520 KEGG:ns NR:ns ## COG: SPy1520 COG0206 # Protein_GI_number: 15675420 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 440 1 439 439 588 81.0 1e-168 MSFSFDSASVQGAVIKVIGVGGGGGNAINRMIEEGLAGVEFIAANTDIQALSSSKAETVI QLGPKLTRGLGAGGQPEVGRKAAEESEETLTEALTGADMVFITAGMGGGSGTGAAPVIAR IAKSLGALTVAVVTRPFGFEGNKRGSFAVEGIQELREQVDTLLIISNNNLLEIVDKKTPL LEALSEADNVLRQGVQGITDLITNPGLINLDFADVKTVMANKGNALMGIGIGSGEERIVE AARKAIYSPLLETTIDGAEDVIVNVTGGLDMTLTEAEEASEIVGQAAGNGVNIWLGTSID DTLKDEIRVTVVATGVRQDRAEKVSGMKARPRKVTTSPSQSSVPTQQVAQEQQRPGSQPS FERQLNLDYNETPSMSQSGVRPAVAASQQEQSAFGHWDLKRDDISRPETGELDSQLTMST FSSDVEDDDELETPPFFKNR >gi|311100538|gb|AEKO01000007.1| GENE 630 627256 - 627939 472 227 aa, chain + ## HITS:1 COG:SPy1519 KEGG:ns NR:ns ## COG: SPy1519 COG0325 # Protein_GI_number: 15675419 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Streptococcus pyogenes M1 GAS # 1 222 1 222 223 263 59.0 2e-70 MTIEDNKNGIYQAVKKACEKANRSSEEVNIIAVTKYVSSEIAEELVETGIKHIAENRVDK FLDKYQALKKYDLTWHLIGSLQRRKVKDVINLVDYFHALDSVKLAEEIQKRADHTINCFL QVNVSGEESKHGFPPEELDTVLNHIENLDKICIVGLMTMAPIDANAQELDKIFAETNELR QSIQDKKIKNVPCDQLSMGMSRDYDMAIQNGSTFVRIGSAFFKENGE >gi|311100538|gb|AEKO01000007.1| GENE 631 627944 - 628528 565 194 aa, chain + ## HITS:1 COG:SPy1518 KEGG:ns NR:ns ## COG: SPy1518 COG1799 # Protein_GI_number: 15675418 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 194 1 218 218 164 49.0 8e-41 MAIKDAIDKIVSYFDTDEVTDYEDVAKEEAKERPVKVQKTGHTPPPRQQRKPERPQATVP PRRQHINSDVQETQVLRSLPLSRSQASQGSQQMNITKTTIAIKYPKKYEDAQEIVELLIE NECVLIDFQYMLEAQARRCLDFIDGASKVLTGNLQKVGSSMYLLTPINVVVDIEEIGLTH GNQEATFDFDMKRR >gi|311100538|gb|AEKO01000007.1| GENE 632 628532 - 628789 177 85 aa, chain + ## HITS:1 COG:SPy1516 KEGG:ns NR:ns ## COG: SPy1516 COG0762 # Protein_GI_number: 15675417 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Streptococcus pyogenes M1 GAS # 19 80 18 79 84 61 58.0 5e-10 MSVLLYVIWARIVNLVEILLVIYALLSWFPGAYDTALGKTIRQIVQPILAPFRRLNLVFA GIDFSIIAIILLLNFSLSILKVVLF >gi|311100538|gb|AEKO01000007.1| GENE 633 628896 - 629588 256 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238927880|ref|ZP_04659640.1| ribosomal protein S4e [Selenomonas flueggei ATCC 43531] # 1 222 40 260 264 103 30 2e-20 MTDFLNPREIQIVKDLANYYNLKFFVSSTFDNEEYGRVILAPDYYELDEDDFEIKRLEIS YARQFNKLIHPKILGALINQLGLERQVFGDIILDEEGRVQFNIASHLASYAIMSITKIGK VSVTLREASKDDWISNKEKYSQSFVLLSSMRLDNVLATVLKISRSNALKLIASGKVKLNY RQIEKADQTISIGDMISVRGFGRFRLAQQEGISKSGKAKVVIDSLLRRQK >gi|311100538|gb|AEKO01000007.1| GENE 634 629772 - 630647 1123 291 aa, chain + ## HITS:1 COG:SPy1514 KEGG:ns NR:ns ## COG: SPy1514 COG3599 # Protein_GI_number: 15675415 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Streptococcus pyogenes M1 GAS # 1 289 1 252 252 264 61.0 2e-70 MAITALDIKDKQFTTKFRGYNEQEVDEFLDIIVDDYEDLVRDNRELSTRVKELEEKLAYF DEMKESLSQSVILAQETAEKVKASAADESANLINKANFNATHLIEEAKSKASEILRDATD EAKRVAIETEELKRQSRVFHQRLLAAVEGQLNLANAPEWGELLQPTAIYLQNSDAAFKEV VEKVLDEHVPDSNDAASFDATRQFTPDEMAELQRRVAESNKQVEDFSNPDIDETNDITSI PVDFGIADSFESEVADFPTSTLVDEDIDLQSEASVEINLNETQTFKLNIGE >gi|311100538|gb|AEKO01000007.1| GENE 635 630895 - 633693 3143 932 aa, chain + ## HITS:1 COG:SP1659 KEGG:ns NR:ns ## COG: SP1659 COG0060 # Protein_GI_number: 15901494 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 930 1 930 930 1716 88.0 0 MKLKETLNLGKTAFPMRAGLPNKEPLWQKEWEDAKMYQRRQELNQGKPHFTLHDGPPYAN GNIHVGHAMNKISKDIIVRSKSMSGFYAPYVPGWDTHGLPIEQVLAKQGVKRKELDRAEY LKMCRDYALSQVDKQREDFKRLGVSADWDNPYVTLTPDYEAAQIRVFGEMAKKGYIYQGA KPVYWSWSSESALAEAEIEYHDLVSTSLYYANKVKEGKGVLDTDTYIVVWTTTPFTVTAS RGLTVGADIEYVLVKPAGETRKFIVASELLNSLSEKFGWAEVEVLNTYRGDELNQIVTEH PWDTEVDELVILGDHVTTDSGTGIVHTAPGFGEDDYNVGIANGLEVAVTVNERGIMMENA GPDFEGQFYDKVAPIVMEKLGDLLLAKEEISHSYPFDWRTKKPIIWRAVPQWFASVSKFR QEILDEIEKVKFHSEWGKVRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDKTPIMTEETI EHVAKLFEEHGSVIWWERDAKDLLPEGFTHPGSPNGEFTKENDIMDVWFDSGSSWNGVVV NRPELTYPADLYLEGSDQYRGWFNSSLITSVANHGVAPYKQLLSQGFALDGKGEKMSKSL GNTIAPSDVEKQFGAEILRLWVTSVDTSNDVRISMDILSQVSESYRKIRNTLRFLLANTS DFNPTTDAVAFEDLRSVDQYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFY LDFAKDVVYIESAESLERRQMQTVFYDILVKITKLLTPILPHTAEEIWSYLEFENEDYVQ LSELPEAEDFANQDALLEKWNAFMDFRGQAQKALEEARNEKVIGKSLEAHLTIYPDAEVK ELLESLNTNLAQLLIVSALTIAEEDVPESAVSFQGVSFTVERAEGEVCDRCRRIDPTTKE RSYNATICDHCASIIEENFAEGVAEGFEVKAK >gi|311100538|gb|AEKO01000007.1| GENE 636 633739 - 634995 502 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 470 61.0 1e-132 MRLIKNTTELIGIKDQNIIISLVFETDTHIEVQAKLDYPAPPCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLHLKKRRFQCKSCKRVTVAETSIVEKKHQISNLVRQKVTQLLTEKVSL TDIARRLLVSTSTVHRKLDQFTFKKHYDKLPAIMSWDEFGFKKSELAFIAQNYETNELIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAEIIIDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENMSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100538|gb|AEKO01000007.1| GENE 637 635225 - 636487 1598 420 aa, chain + ## HITS:1 COG:SP0159 KEGG:ns NR:ns ## COG: SP0159 COG1914 # Protein_GI_number: 15900097 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Streptococcus pneumoniae TIGR4 # 1 420 1 420 420 640 86.0 0 MSQTSITSQSTWRSKIKAMGPGILMASAAVGGSHIVSSTQAGGSYGWALLGLVILANLFK YPFFRFGAEYTADTGKTLVEGYAEKGKFYLWVFFILNVFSALVNTAGVSILCSAIIASAF PMLGLSITTWSIILVAIIWGMLLFGGYKLLDGMAKWIMSALTIATVAAVIIAAIKHPEYS TDFVEKTPWQLAALPFIVSLLGWMPAPIEISAINSLWSAEKKKTVDFNTDDALFDFNVGY IGTAILAVFFVALGALIQYPTGKPVEAASAKYIAQFVGMYASVLGEWSRYLITFIAFLCI FGTVITVIDGYSRVNEISLRLLFNQKEKNQTPLNVWMTLTAILGLIIIFFFQGQVATMLR FAMIGSFLTTPFFALLNYVLVTKEKKDLPTWLKGLAIAGLIFLFGFALFFIWALAIGKAG >gi|311100538|gb|AEKO01000007.1| GENE 638 636616 - 636858 427 80 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228477621|ref|ZP_04062254.1| ribosomal protein L31 [Streptococcus salivarius SK126] # 1 80 1 80 80 169 100 3e-40 MKKDIHPDYRQVVFMDTTTGYQFLSGSTKHSNETVEFEGETYPLIRVEISSDSHPFYTGR QKFTQADGRVDRFNKKYGLK >gi|311100538|gb|AEKO01000007.1| GENE 639 636964 - 637896 737 310 aa, chain - ## HITS:1 COG:SP1470 KEGG:ns NR:ns ## COG: SP1470 COG1477 # Protein_GI_number: 15901320 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 1 304 1 304 307 327 55.0 2e-89 MQLTNRRVRLMGTVIDVSIYHEEPTPLLDQVEALLHTYNKRFSANDDSSELMKINKAAGL HSVTVHPELFELIALGKWHSCQPGSHLNIAIGPLIQTWRIGFSDARLPLPEEIAPLLDII NPKDIVLSEENQSVFLKEKGMKIDLGALAKGYIADRIADYLKDENVTSALINLGGNVLTF GPALHNPDQKWRIGIQNPKETRNTNLMVLAIRDQSIVTSGIYERTFEIDGKTYHHIFDSQ TGYPVSSDLASLTIISSLSVDGEIWTTRLFGSSLERIFQEVSSQPNLEAIIVDKDNRCFQ TGGIYKMRIS >gi|311100538|gb|AEKO01000007.1| GENE 640 637883 - 638869 1101 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 24 321 10 307 311 428 69 1e-118 MFHDIIETKSQGDIHDYISSYFRKIKAYDTIIIHRHQRPDPDAIGSQVGLKEILKTNFPD KKVLATGVNEPTLSWIAEMDKVTDQDYEGALVIVTDTANTPRIDDDRFDKGDFLIKIDHH PNDDAYGDLLLVDTTASSASEIVTDWALTLGLSLSDAAARVLYNGIVGDTGRFLYPSTTP KTLQIAAKLREHNFDFASMARRMDSFPFKIAKLQGYVFDNLEVDENGAARVVLTRKILDD FNVTDAESSAIVGTPGRIDCVESWAIFVEQPEGHYRVRLRSKSIVINEIAKRHDGGGHPL ASGANSYSLNENEQIYREIKDTVAHATH >gi|311100538|gb|AEKO01000007.1| GENE 641 638906 - 639694 914 262 aa, chain - ## HITS:1 COG:SP1550 KEGG:ns NR:ns ## COG: SP1550 COG0625 # Protein_GI_number: 15901393 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Streptococcus pneumoniae TIGR4 # 1 262 1 262 263 344 68.0 1e-94 MSDYILPEVWEIPTSMGGAWGGLNQPTAGARFEQTLPKGDQPFQLYTLPTPNGIKATIML EELKELGVTQAGYDAYRIKIGDGDQFGSDFVAINPNSKIPAMMDYSEEQPVRVFESANIL LYLAEKFGKLIPTDHAKRTEVLNWLFWQTGAAPFLGGGFGHFFHYAPDKIEYAINRFAME AKRQLDLLDKELATKPYIAGDEYTIADIAIWSWYGRLAQDKIWEKAGIFLDVKEYKHLQA WTEKIANRPAVKRGLEVDYKDI >gi|311100538|gb|AEKO01000007.1| GENE 642 639867 - 640877 1107 336 aa, chain + ## HITS:1 COG:L87453 KEGG:ns NR:ns ## COG: L87453 COG1816 # Protein_GI_number: 15672269 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Lactococcus lactis # 8 335 17 347 352 239 41.0 5e-63 MTAIDFHKLAKTELHCHLDGSLSLETIRHLADLAQIELPEDDAELKHHVTAPATCESLLD YLEAFDYIRPLLQTKEALTIAAYDVAKQAALENVIYIEVRFAPELSMDKGLTVAEIIDAV CQGLRQAQEEFGIIAKALVCGMRQSDQALTARILDEANEVEDSDFVGFDFAGDEHHYGPK AIKPLIEQVQSYNRPMTFHAGECGCAAFLAESIAMGIKRNGHATILAQEPELLEEFVKNG VTGELCLTSNLQTKAAVTVADFPYLKMKVAGANITINTDNRTVSDTNLTKEYELYHKHFD SSVQDFYAHNKTAIEASFASDEEKAELLDRLAKAYS >gi|311100538|gb|AEKO01000007.1| GENE 643 641062 - 641658 357 198 aa, chain + ## HITS:1 COG:SPy1140 KEGG:ns NR:ns ## COG: SPy1140 COG1435 # Protein_GI_number: 15675117 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 187 1 187 189 316 76.0 2e-86 MAQLYFRYGTMNSGKSIEILKVAHNYEEQGKPVVLLTSRLDNRDGVGYISSRIGMKRKAY PIGDDTDIFGYIANMYPRPYCVLVDEAQFLTRANVYDLARIVDVLDIPVMAFGLKNDFQN NLFEGSKYLLLLSDKIDEIKTICHYCSRKATMVLRMEDGKPVYEGAQVQIGGHESYISVC RKHWFNPPHENIIPLNKA >gi|311100538|gb|AEKO01000007.1| GENE 644 641695 - 642774 1426 359 aa, chain + ## HITS:1 COG:SPy1141 KEGG:ns NR:ns ## COG: SPy1141 COG0216 # Protein_GI_number: 15675118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Streptococcus pyogenes M1 GAS # 1 358 1 358 359 600 95.0 1e-171 MNIYDQLQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSI SDAEEMIKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGA AGGDEAALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYE SGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNK VATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVG TGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQTQKLEELNK >gi|311100538|gb|AEKO01000007.1| GENE 645 642771 - 643604 227 277 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225082709|ref|YP_002653927.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [marine gamma proteobacterium HTCC2148] # 36 238 62 261 305 92 34 5e-17 MILADVLADYEKQLEAVGEEPEALSFVYRGLKQWDLTHFVLQLRQEVSEEDAELLAHVFS QLKNHKPAQYILGYEDFHGLRFQVDERVLIPRPETKELVDLILAENPSSELKILDIGTGS GAISVSLKKSCPFWQVTASDLSADALVLAKENAKLNQVDISFVQSDVFENISGSFDIIVS NPPYISENDKDEVGLNVLTSEPKMALFADEEGLAIYRQIIEDATKYLTPKGKLYFEIGYK QGLDLKRLLSLHFPDKHVRILKDQFGQDRMVVMDDEK >gi|311100538|gb|AEKO01000007.1| GENE 646 643591 - 644196 319 201 aa, chain + ## HITS:1 COG:SPy1143 KEGG:ns NR:ns ## COG: SPy1143 COG0009 # Protein_GI_number: 15675120 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Streptococcus pyogenes M1 GAS # 12 198 8 194 196 270 73.0 1e-72 MMKSKKQLRESLDNGEAIVLPTETVYGLFAKAMDESAVNHVYELKNRPIDKAMNLNVASY EDILSYSKEQPKYLKQLYDAFLPGPLTIILKANDQVPRWINSGLATVGFRLPNHPVTREL IQAEGPLIGPSANKSGKESGRHFDDIRAQFDFQVTGYRDDNALLGVDSTILDLSVSPARI LRQGKITKDDLLAALPELTIE >gi|311100538|gb|AEKO01000007.1| GENE 647 644291 - 645541 1713 416 aa, chain + ## HITS:1 COG:SP1024 KEGG:ns NR:ns ## COG: SP1024 COG0112 # Protein_GI_number: 15900895 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 416 1 416 418 668 81.0 0 MIFDKEDYKAFDPELWNAIDAEAERQQNNIELIASENVVSKAVMAAQGTLLTNKYAEGYP GKRYYGGTDVIDVVESLAIERAKELFGAKFANVQPHSGSQANAAVYMSLIQPGDTVMGMD LSAGGHLTHGAPVSFSGKTYNFVPYNVDKESELLDYDAILAQAKEVKPKLIVAGASAYSR IIDFAKFREIADAVGAYLMVDMAHIAGLVASGHHPSPVPYAHVTTTTTHKTLRGPRGGLI LTDDEDIAKKLNSAVFPGLQGGPLEHVIAAKAVALKEALDPAFKEYGENVIKNAAAMADV FNQHPDFRVISGGTNNHLFLVDVTKVVENGKVAQNVLEEVNITLNKNGIPYEQLSPFKTS GIRVGSPAITSRGMGEAESRKIAELMVEALENHDKPEVLERIRGDVKVLTDDFPLY >gi|311100538|gb|AEKO01000007.1| GENE 648 645548 - 646525 784 325 aa, chain + ## HITS:1 COG:no KEGG:str0756 NR:ns ## KEGG: str0756 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 325 1 325 325 558 96.0 1e-158 MLDLYIKRIIIHQFSPNDTELVLAEGPLEITPRLDEYFRKKLSKVFSDEAKRGYFDTENV FISHLGDDLMESSVKIAQLWKEEFVISEDQKTNDLVFIQFDKEGQEYFAFLRIALKDSLI HSLGDSQHPIQLSQNNLPSAAQTPDEALVINRSSKQYYLIEKRIKHNGSFANYFSENLLQ VQPEQSVKKSIKMVEDTAQKIAENFNQDDFNFQGKMKSAIFNNLEEDQELSPEKLADQLF DNNLTARLTFVDELKEAIPEPISVSDIDHSRQIKKLENQKLSLSNGIELIVPNNVYQDAD SVEFIQNPDGTYSILIKNIEDIINK >gi|311100538|gb|AEKO01000007.1| GENE 649 646527 - 647138 577 203 aa, chain + ## HITS:1 COG:SPy1147 KEGG:ns NR:ns ## COG: SPy1147 COG0741 # Protein_GI_number: 15675124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Streptococcus pyogenes M1 GAS # 1 201 1 197 199 226 60.0 2e-59 MFKWIRRLAVFVVVLIIGIQCYRIHANIQHVLTYESMVKEVLAEDDIENTTNVDLVLAMI YTETKGKTDDVMQSSESSTGVTNSITDRKESIRQGVTVLSENLEEAAHHKVDPWTAVQAY NFGKAYIDYVADNGGVNTVELANAYSKDVVAPSLGNTSGKTYTYYQPVAMYYGGGKLYTN GGNIYYAKEVQFNLFLMRMFSRL >gi|311100538|gb|AEKO01000007.1| GENE 650 647170 - 648909 190 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 332 561 129 356 398 77 27 1e-12 MKALLVYFKGYVKDSILGPVFKLIEASFELLVPLVIAGIVDTTIPNKDQNHLFMMIFLLL GLAVIGVVVAISAQYFSSRAAVGYAQSLTDELYAKIMRLSKEKRDEIGTSSLVTRLTGDT FQIQTGINQFLRLFLRAPIIVTGAIIMAFRISPRLTLWFLGMVLVLTLIIVLASRIVNPL YAKIRVINESIVTNTRQQLEGMRVIRAFDQSERELDNFTAVNKDLKKWQLKTGAIASLIS PLTFLVVNMTLIAILWQGNLQIQGGLLSQGMLIALVNYLLQILTELLKLAMMLTNLNQSF ISAKRVQAIFNLQDEDIEVPLTIKKPNRPRIALEIDKMTFTYPTASQPSLQEIDFKTFEG ESLGIIGGTGSGKSTLVNLIMNLYQPQFGSLTIFKNQLSPNNLKEWRSWVAYVPQKAELF RGTIRSNLSLGLDHEPSDQELWYALDMAQAADFVRDKDLGLDEPVESFGRNFSGGQRQRL TIARALMRPAPFLILDDSTSALDYLTESCLLAAIRDNLKSTSLIIISQRTNSLKAVDQIL VLDKGYQVGLGNHEELLATNKLYQDIHYSQHQKEVADEG >gi|311100538|gb|AEKO01000007.1| GENE 651 648899 - 650647 189 582 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 348 567 134 355 398 77 27 1e-12 MKARNNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLL MSRLIWQMLLVILANSAIQWLNPLIYNRLIYSYSESLRERVMMKIHAMPLSYLDRQGTGD IVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMSRLDWLMMLLVLVMTPLSMLVAR FIARKSYQLYRNQTKWRGTQTQLIEESLTQEALVQSLNAQDQMVRSFKDVNGKYADYSQG AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGTFTVGQLTTFLNYVTQYTKPFNDIS SVLSELQSALACADRLYMILDENEIPETGNAVLEEEDVQGHFQFDHVQFGYLHNKPLIKD LSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQILLDGRPITDYTRESLRKRIGM VLQETWLEVATIHDNIAYGNPKASREEVVAAAKAANADFFIKQLPQGYDTFLKDAGQSLS QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTI ENADLILVMNNGDIVEYGTHEQLMQAKGMYYRMQTAQKTQNS >gi|311100538|gb|AEKO01000007.1| GENE 652 650819 - 650950 61 43 aa, chain + ## HITS:1 COG:no KEGG:str0760 NR:ns ## KEGG: str0760 # Name: dltX # Def: component involved in D-alanylation of teichoic acids, putative # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 43 46 88 88 63 100.0 3e-09 MLKHKNVLVFLGQTLLYFAIFMALIYLYNYLGQGQGNFIYNEF >gi|311100538|gb|AEKO01000007.1| GENE 653 650959 - 652509 1755 516 aa, chain + ## HITS:1 COG:SP2176 KEGG:ns NR:ns ## COG: SP2176 COG1020 # Protein_GI_number: 15901986 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 516 1 516 516 895 86.0 0 MTNTKIKDMIETIEQFAQSQPDFPVYNILGEVHTYGDLKAASDNLAAKIDSLDIPEKSPV VVYGGQEYEMLATFVALTKSGHSYIPIDSHSALERVTAIVEVAEPSLIIAINDFPLEDVQ TPILTLDQVKIAFESKTSYEVTHPVKGDDTYYIIFTSGTTGKPKGVQISHNNLLSFTNWM ITDKEFATPTRPQMLAQPPYSFDLSVMYWAPTLALGGTLYALPSAITQDFKKLFETIFSL PIAIWTSTPSFADMAMLSEDFNAEKMPEITHFYFDGEELTVKTAQKLRQRFPEARIINAY GPTEATVALSAVAVTDEMLANLKRLPIGYTKEDSPTYIIDEDGNILPNGQQGEIIVSGPA VSKGYMNNPEKTAEAFFEFNGLPAYHTGDVGTMTDEGLLLYGGRMDFQIKFNGFRIELED VSQNLNKSKYIDSAVAVPRYNKDHKVQNLLAYVILKDGVREQFERDIDITKAIKADLEDI MMSYMMPTKFLYRESLPLTPNGKIDIKGLISEVNNR >gi|311100538|gb|AEKO01000007.1| GENE 654 652506 - 653756 1149 416 aa, chain + ## HITS:1 COG:SP2175 KEGG:ns NR:ns ## COG: SP2175 COG1696 # Protein_GI_number: 15901985 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane protein involved in D-alanine export # Organism: Streptococcus pneumoniae TIGR4 # 2 414 1 413 413 571 73.0 1e-162 MIDFLKQLPHLEAYGNPFYFIYLGIALLPIFIGLFFKKRFAIYECLVSLAFIVLALTGTH AIQLLALLFYIIWQIIWVYSYKRYRSQKDNKWVFYLHSFLVVLPLIFVKVEPAINGNQSL FNFLGISYLTFRAVGMIIEMRDGVLKEFTLGEFLRFMLFMPTFTSGPIDRFKRFNDDYQA IPERDELMNMLEQAVKYIMLGFLYKFVLAQIFGSMLLPPLKEQALSQGGIFNLPTLGVMY VYGFDLFFDFAGYSMFALAASNLMGIKSPINFDKPFISRDLKEFWNRWHMSLSFWFRDFV FMRMVMVLMRNKVFKNRNTTSNVAYVLNMMVMGFWHGVTWYYIAYGIFHGVGLGINDAWL RKKKTINKERKKAGLKPLPENKWTKALGIFITFNTVMLSFLIFSGFLNDLWFTKNK >gi|311100538|gb|AEKO01000007.1| GENE 655 653770 - 654009 448 79 aa, chain + ## HITS:1 COG:SP2174 KEGG:ns NR:ns ## COG: SP2174 COG0236 # Protein_GI_number: 15901984 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Streptococcus pneumoniae TIGR4 # 1 79 1 79 79 111 88.0 4e-25 MDVKSEVIEIIDELFMEDVSDMMDEDLFDAGVLDSMGTVELIVELESRFDIRVPVSEFGR DDWNTANKIVEGVTELRNA >gi|311100538|gb|AEKO01000007.1| GENE 656 654002 - 655270 1265 422 aa, chain + ## HITS:1 COG:SP2173 KEGG:ns NR:ns ## COG: SP2173 COG3966 # Protein_GI_number: 15901983 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) # Organism: Streptococcus pneumoniae TIGR4 # 8 422 2 416 416 483 59.0 1e-136 MLKRLWQIFGPVICALVLVVVVIYAYPQGRKYSYEAEKRSAVTLTNENFKSRTNKTTALS DQNHRFVPYFGSSEWLRFDALHPAVLAEKYDRNYRPYFIGQRGAASLNQYLGMQQMLPEL QNGTAVYVLSPQWFTKKGYNSAAFQQFFNNDQLSSFLSQNQTDANSQYAAERILEIKPKI TMKSQLSKVAKGQDLNTVDKTYIQFMAELNKREDSLFSPLVALNNANYDKKVLPYLKELP DQFSYDALDQVAVRDAEAHTKSNDFGIDDRFYKKRLSKKIGKLKGFQKNLSYEVSQEYGD LQLVLNQFAKSNTNVIFVIPPVNSKWMAYTGLNQEMYDATVSKIRYQLESQGFTNIADFS KDGDQPYFMQDTIHMGWKGWVAFDKAVDPFVSNPTPAPSYKLNDRFYSKDWAGYTGTPSQ FK >gi|311100538|gb|AEKO01000007.1| GENE 657 655437 - 658073 2511 878 aa, chain - ## HITS:1 COG:SPAPB2B4.04c KEGG:ns NR:ns ## COG: SPAPB2B4.04c COG0474 # Protein_GI_number: 19114802 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Schizosaccharomyces pombe # 19 874 212 1148 1292 382 30.0 1e-105 MKKFQGLTSTEVQASKNAHGDNKLSSKEANSLLSIFIEAFQDQWILILLAALGLKIIFNF VGMIFPAIGEANWYEAISLIFAILMSTGFSAVSQYRNEQKFNTLQEEASKTNAKVYRDGK LKEVLVDDIVKGDQILLQSGDKIPVDGIILEGELKVNQAVLNGESEDAKKLPLSNQAEPD SSDLFTELKVFRGTVVTSGEAVMEATQIGDNTVLGSINTSLQEDSKDSPSKEKLNKLAGN IGVLGYSAGAAYSVINLVLGFIALNKANNLNGGSTFLLIIETILFAVTIIIMAVPEGLPM MLALVSSMNSGRLLAQNILVRHPDTIETAGYMNILFSDKTGTITEGKLSVVDFFLADGTL YAATGETDAPDFDTMSDSLKAEMINGIGLNNDAIVADGSAVGSNATDRALLDFLIGRSQL DFDTNTITEKQQFNSATKFASVTTKDGKTYIKGAPEFILNDCNYYLDKNGNKLNFTDDIK ARFQELSLEQANRSMRLLAILNIDGNDKVLIGIVCIRDNVRSSIKQTVETMNRAGVQVVM VTGDRKETAVAIAKEAGIVTGENDLVLTHDELSALSDQKLKQQLPHLKVVSRALPMDKKR LIEAAQDLDMVAGMTGDGVNDSPALKSADVGFSMGDGTEVAREASDIVILNNSLTSIEKA VLYGRTMSKSVSKFIIFQLTVNVTTIAMSLLSPLLGLKEPFTIIQILWINLIMDTLAALA FGEEPTLDRYMNEKPVAKKANILTDYMKSAIGVASIFITVVCLAILKNVVGIQDFITNGT GNFEMVTTFTFTVFIYAVIFNSLNTRSNSFNIFEHIGENKKFSIVMISIAVVQTLIIQFG GKVFSTVPMNIQHYIIALLIAVLIIPADFIRKALTKNK >gi|311100538|gb|AEKO01000007.1| GENE 658 658235 - 659953 1105 572 aa, chain - ## HITS:1 COG:SP0665_1 KEGG:ns NR:ns ## COG: SP0665_1 COG0147 # Protein_GI_number: 15900566 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Streptococcus pneumoniae TIGR4 # 1 380 1 380 380 549 68.0 1e-156 MHKKTVIDFKELGVRQIFTDTIKELKTKDIKEVKHLLAEVEAYQNQGYYAVGYVSYEAAP AFETKFEVIDDPLMSEYLLYFTIHESVQTEPIPLTYKPITLPKTWQELTSAEEYKAAIEH IHHHIRQGDTYQVNYTVQLQQNITADPFAIYNRLVVEQNAHYNAFIQHDDVSIISVSPEL FFKKDGDGLTTRPMKGTTNRGLTTETDLKQAQWLAQDQKNRSENMMIVDLLRNDMNRISK IGSENVKSLCLVEQYSTIWQMTSTIETQLLPNSSLGDIFQALFPCGSITGAPKIATMAII KDVEKQARGVYCGAIGILLPNGPTIFNVAIRTLQMQGNKAIYGVGGGITWDSKWEAEYEE TKQKSAVLYRQNPKFDLISTGRIHRGKLLFLKEHLNRLQESSRYFSYPFNKEEVQNQVED LCQSLDFDTDYRLKMSLAKNGELTFEHNQLTGLADVFCQARLVEQTHPLDSPYTYFKTSY RPHISLEPHEQIYYNQKKELLETSIGNLVLKIEDQLYTPPVHLGLLNGIYRQSLIANNQV TERVLTLDNLKQAQAIYGCNAVRGLYELKVDI >gi|311100538|gb|AEKO01000007.1| GENE 659 660102 - 660455 221 117 aa, chain + ## HITS:1 COG:no KEGG:str0784 NR:ns ## KEGG: str0784 # Name: not_defined # Def: unknown protein, phage associated # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 111 1 111 111 176 96.0 2e-43 MTNKNKFEKGNSSLSNKKLKKVTSKRNSWKHQMYELEIAIAKESSNKKRDELIKLYNGYM SEYNSLKKQIIWLAVLGICFLVVLVILGYFIWNSYNSENMSYTSSWLQERVISTIKI >gi|311100538|gb|AEKO01000007.1| GENE 660 660774 - 663023 3030 749 aa, chain + ## HITS:1 COG:SP0585 KEGG:ns NR:ns ## COG: SP0585 COG0620 # Protein_GI_number: 15900494 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Streptococcus pneumoniae TIGR4 # 1 749 1 749 749 1416 93.0 0 MSTTIIGFPRLGEFRELKFTTEKYFRNEITADELLAAAKDLRAKHWNIVKEKGITEIPSN DFSHYDNFLDAAFLFNVVPASVQNLDLTDLERYFALARGYQGEKGDVRALPMKKWFNTNY HYIVPKFEKTTEVKLAGHKIFDEFQEAKELGLNTRPVVVGPFTFLQLSDFEDGVKAEDFV DSFVVAYQEVFAKLVELGATRIQLDEPALVKDLTAEEKALFLNLYNKLLADKKGLEVLIQ TYFGDVRDIYNDLVNLPVDGIGLDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNNY EKSLAILEQVPAENVVLTTSCSLLHVPFTTANEEFEPAILNHFAFAVEKLDELRDLDAIR NGQGEEALADNKELFATERVGENAELRARIAGLTEADYTRLPAFAEREAIQKDAFKLPLL PTTTIGSFPQTKEVRAKRLAFRKNELSQEEYDAFLAEITDEWIKWQEEVGFDVLVHGEFE RNDMVEYFGQNLSGYLFSKNGWVQSYGMRGVKPPIIWGDVTRLNPITVKWSSYAQSRTDK PVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREK LPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNLDADVISFE ASRSNLEILDELKAQNFQTEVGPGVYDIHSPRVPQDGEIDHTIEAILAKVPSGKVWINPD CGLKTRGIKETKESLIKLVEAAKAARENL >gi|311100538|gb|AEKO01000007.1| GENE 661 663207 - 664082 1024 291 aa, chain + ## HITS:1 COG:SP0586 KEGG:ns NR:ns ## COG: SP0586 COG0685 # Protein_GI_number: 15900495 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 286 288 509 88.0 1e-144 MTSQTPSLSFEVFPPNPAVGNEKILRALEDMQGLAPHFISVTASNNKYNIKETTVPLADH IQNDLAIPTIAHLPAIYLGKEKVAETLRDLDAVGVHRILALRGDIIPGVEPLKDFSYATD LIEFIKEEAPQFDIIGACYPEGHPDSPNQISDIQNLKKKVDAGCSSLVTQLFFDNERFYD FQDKCTLAGIDVPIHAGIMPILNRNQALRLLKTCENIHLPRKFRAILDKYEHDPESLRAA GLAYAIDQIVDLVTQDVAGVHLYTMNNAETARHIHGATHSLFKHHSQVSAL >gi|311100538|gb|AEKO01000007.1| GENE 662 664220 - 665938 2004 572 aa, chain - ## HITS:1 COG:SPy1224 KEGG:ns NR:ns ## COG: SPy1224 COG1109 # Protein_GI_number: 15675188 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 571 1 572 572 962 85.0 0 MSYTENYQKWLDFAELPAYLRDELVAMDEKTKEDAFYTNLEFGTAGMRGLIGAGTNRINI YVVRQATEGLAQLIDSKGEEAKKRGVAIAYDSRHFSPEFAFESAQVLAAHGIKSYVFESL RPTPELSFAVRHLHTFAGIMVTASHNPAPFNGYKVYGEDGGQMPPADADALTDYIRAIDN PFTVKLADLEDSKASGLIEVIGENVDAEYLKEVKDVNINQDLINEYGRDMKIVYTPLHGT GEMLARRALAQAGFDAVQVVEAQAVPDADFSTVKSPNPENQAAFALAEELGRKVDADVLV ATDPDADRLGVEIRQPDGSYLNLSGNQIGAIIAKYILEAHKTAGTLPANAALCKSIVSTE LVTKIAESYGATMFNVLTGFKFIGEKIHEFETQHNYTYMLGFEESFGYLIKPFVRDKDAI QAVLIVAEIAAYYRSRGMTLADGIEEIYKQYGYFAEKTISVTLSGVDGAAEIKKIMDKFR GNAPKQFNNTDIAKTEDFLEQTATTADGVEKLTTPPSNVLKYILADDSWFAVRPSGTEPK IKFYIATVGETEADAKEKIANIEAEINAFVGE >gi|311100538|gb|AEKO01000007.1| GENE 663 666018 - 666590 565 190 aa, chain - ## HITS:1 COG:SP1232 KEGG:ns NR:ns ## COG: SP1232 COG4684 # Protein_GI_number: 15901094 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 6 190 3 187 187 158 56.0 6e-39 MNKKNKANQMAQLALLIATMVVIEVLSQTIFAAFVLPIKPTLTHIPVIIASIVYGPKIGA YLGGFMGIMSIIRNTIIYSVSSYLFSPFVEGGTWVSAVIAIVPRILIGIFPYFVYKLVQN RIGLTLSGILGAFTNTFFVLLGIYFLIPNFYSAGGKTLMATIFTTNSVAEMVIAGLLTLS ITPVLLRLKK >gi|311100538|gb|AEKO01000007.1| GENE 664 666583 - 667146 505 187 aa, chain - ## HITS:1 COG:SPy1222 KEGG:ns NR:ns ## COG: SPy1222 COG0452 # Protein_GI_number: 15675186 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 177 1 177 181 232 71.0 3e-61 MTKRIILAVSGSISAYKSADLTSKLKKKGYDIHVIMTEAAQAFITPLTLQVLSKNLVHTD VMEEKLAERINHIDLAKETDLFIVAPASANTIAKLAHGMADNMLTATALALPSTTPKLIA PAMNTKMYENPLTKKNLKTLQEVGYQEILPKSGLLACGDTGRGALADIAVIIESIDSALT RKGVYDE >gi|311100538|gb|AEKO01000007.1| GENE 665 667139 - 667822 734 227 aa, chain - ## HITS:1 COG:SPy1221 KEGG:ns NR:ns ## COG: SPy1221 COG0452 # Protein_GI_number: 15675185 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Streptococcus pyogenes M1 GAS # 1 227 1 228 228 245 58.0 6e-65 MKILITSGGTTEKIDAVRGITNHSTGYLGKEIAELFLAKGHQVTLVTAKTAVKPEPKENL KITEITNVDSLLKSMEPLVKEHDVLIHSMAISDYTPIYMTDFAELEDTENLSQLLHKSNT ESKISSTSDYQVLFLKKTPKIISLVKQWNPNIQLVGFKLLANVSKEDLFEAARTSLKRNQ ANIIVANDLGEITPNQHIAYLVDEKGEEKVTTKSAIAQALFERICHD >gi|311100538|gb|AEKO01000007.1| GENE 666 668017 - 669687 2172 556 aa, chain + ## HITS:1 COG:SPy1213 KEGG:ns NR:ns ## COG: SPy1213 COG2759 # Protein_GI_number: 15675177 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 556 1 556 556 907 83.0 0 MKTDIEIAQSVELKPITEVVEKVGIGFDDLELYGKYKAKLSFDKINEVKDDKPGKLILVT AINPTPAGEGKSTMSIGLADALNKIGKKTMIALREPSLGPVMGIKGGAAGGGYAQVLPME DINLHFTGDMHAITTANNALSALLDNHIHQGNTLGIDQRRIIWKRVVDLNDRALRHVTVG LGGPLNGIPREDGFDITVASEIMAILCLATDINDLKERLANIVVAYRYDRTPVYVRDLEI EGALTLILKDAIKPNLVQTIYGTPALVHGGPFANIAHGCNSVLATSTALRLADYTITEAG FGADLGAEKFLDIKTPNLPTTPDAVVIVATLRALKMHGGVAKTDLSEENVQAVRDGFANL KRHVENVRKFGLPAVVAINEFVADTEAEIAALKELCSEIKVPVELASVWANGADGGIDLA NAVVDAVENGNADYKRLYSDDDSLEEKITKIVTEIYGGKSVVFEKKAKNQLKQFAEFGWD KLPVCMAKTQYSFSDNQFLLGAPEGFDITIREFVPKTGAGFIVALTGDVMTMPGLPKAPA ALKMDVAEDGTAVGLF >gi|311100538|gb|AEKO01000007.1| GENE 667 669882 - 670556 786 224 aa, chain + ## HITS:1 COG:SP0798 KEGG:ns NR:ns ## COG: SP0798 COG0745 # Protein_GI_number: 15900691 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 222 1 222 224 363 88.0 1e-100 MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGDEGLYEAESGVYDLILLDLMLPEKDGF TVLKELREQGITTPVLIMTAKESLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRSG KFDQNTLSFGDVRVNLATNSTYVGDKEVELLGKEFDLLVYFLQNQNVILPKSQIFDRLWG FDSDTTISVVEVYVSKIRKKLKGTDFATNLQTLRSVGYILKNAD >gi|311100538|gb|AEKO01000007.1| GENE 668 670648 - 671961 1064 437 aa, chain + ## HITS:1 COG:SPy1236 KEGG:ns NR:ns ## COG: SPy1236 COG0642 # Protein_GI_number: 15675197 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 434 30 436 436 424 55.0 1e-118 MTVMILQILSYGVYSNVDSSLKAAATKTNSYLEMEMLKREFFLTSEVDQNNTTTIYQAYD TKSSTAETPDSSGSKKESKKKSKMEDAPHDLSVAANTSVLVLDKNGKVLNVVDKFSSLSN LPIDKNNIDVISKGSAQNYFDQTENYRLITEKVDNNFYPDAKYLVIAINTTQLEEATERY VKLIVIMMSFFWLLSIAASLYLAKWSRRPIQESLEKQKAFVENASHELRTPLAVIQNRLE ALFRKPESTILDNSENIASSLDEVRNMRLLTTNLLNLARRDDGIKPEIETLDFSFFDTVF TNYAMIAEESEKGFTAQNQVGRSIQTDKTLLKQLMTILFDNAIKYTEDDGQVTFTVRTND RHLYITVADNGPGIADEDKKKIFDRFYRVDKARTRQKGGFGLGLSLAQQIVLALKGTIIV KDNQPKGTIFEVKITGA >gi|311100538|gb|AEKO01000007.1| GENE 669 672048 - 672299 381 83 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|62510982|sp|Q5M080|RS20_STRT1 RecName: Full=30S ribosomal protein S20 # 1 83 1 83 83 151 96 7e-35 MEVKTLANIKSAIKRAELNVKQNEKNSAQKSALRTAIKAFNANPTEEAFRAASASIDKAA SKGLIHKNKASRDKSRLAAKLAN >gi|311100538|gb|AEKO01000007.1| GENE 670 672353 - 673273 531 306 aa, chain - ## HITS:1 COG:SP0839 KEGG:ns NR:ns ## COG: SP0839 COG1072 # Protein_GI_number: 15900726 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 306 1 306 306 392 64.0 1e-109 MLNEFINFETISRNDWQRFYQEDQVSLTSEELESIKSLNDKIDVQEVRDIYLPLINLIHI YQRAAEDLTFSKGIFLQKTQANRPFVIGISGSVAVGKSTTSRLLQLLLQRTFPKTKVDMV TTDGFLFPNQVLIDKGILNRKGFPESYDMPLLLNFLDTIKNSGDVNIPVYSHEIYDIVPG LTQEISQPNFLIVEGINVFQNPINQRLYMSDYFDFSIYIDADVKNIKTWYLERFQTLLEL ARKDENNYYHRFTKFTKEEALSLAQKTWEEINLVNLENYIEPTRNRAELILHKGDNHKID LIHLKK >gi|311100538|gb|AEKO01000007.1| GENE 671 673384 - 673974 584 196 aa, chain + ## HITS:1 COG:SP0841 KEGG:ns NR:ns ## COG: SP0841 COG2813 # Protein_GI_number: 15900728 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Streptococcus pneumoniae TIGR4 # 1 195 1 195 196 295 73.0 3e-80 MSKMYYAETPDAAHDIHDLKVNLLGESFQFYTDAGVFSKKMIDFGSQVLLNALDLEAGKT VLDVGCGYGPLGISLAKVQGVKVTMIDINSRAIDLAKQNAERNKVEATIFQSNIYKNVTG SFDYVISNPPIRAGKKVVHQVIEEAYDHLNLSGTLTIVIQKKQGAPSAKAKMEEVFGNAE VVKKDKGYYILRSEKV >gi|311100538|gb|AEKO01000007.1| GENE 672 673971 - 675233 1296 420 aa, chain + ## HITS:1 COG:SP0842 KEGG:ns NR:ns ## COG: SP0842 COG0213 # Protein_GI_number: 15900729 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 415 1 415 425 545 69.0 1e-155 MRTVDLIEKKRDAGELITEEITYLINGYVSGAIPDYQIAALAMAIYYQGMSIREIHDLTT EMVASGEQYDLSEIPGVKVDKHSTGGVGDKVTIILMPLVASFGVPVAKMSGRGLGHTGGT IDKLESIKGYQVERSKEEFIDQVKEIGISLIGQSEHLVKADKLLYALRDVTATVDSIPLI ASSVMSKKIAAGADKILLDVTVGQGAFMKNMSDAEKLSETMVALGREVNRQTIAVITDMS QPLGKAIGNRLEITEAIEIMQGKGREDITDFICELAEILLDLAQVEVSPEEIRQHLVGGK ALAKFEELILAQGGDIEDLYRCSNAPIMTEIHADEAGYIEELPAMAFGKFAMQLGAGRAT KTDSLNYETGIVFEKKVGDSVAQGDLIAKVYSQEILSEKMLTEFKKMLLLVECVKSQMKY >gi|311100538|gb|AEKO01000007.1| GENE 673 675281 - 675943 771 220 aa, chain + ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 1 220 1 220 220 282 68.0 3e-76 MSVNSYIDHTLLKADANEEQIYALIDEAKKYQFASVCVNPTWVKTAAELLKDSSVNVCTV IGFPLGASTSAVKAFEAKDAIANGADEIDMVINIGALKSRNLKLVEDDIKAVVEASGRRL VKVIIETCLLTDEEKVQACQLAKLAGADFVKTSTGFSTGGATIEDIELMRETVGPTMGVK ASGGARTLEAAQAFIKAGATRIGTSSGVAIMKGQESHDSY >gi|311100538|gb|AEKO01000007.1| GENE 674 675930 - 676328 162 132 aa, chain + ## HITS:1 COG:SP0844 KEGG:ns NR:ns ## COG: SP0844 COG0295 # Protein_GI_number: 15900731 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Streptococcus pneumoniae TIGR4 # 8 131 5 128 129 172 68.0 1e-43 MTVTNKDKVIEAARLAAENAYVPYSKFRVGAALITKNGEIFQGCNIENASFGLTNCAERT AIFKAVSEGYCDFEYLAVYGDTKEPISPCGACRQVMVEFFESDSKVILIAKDKSTVEMTV GELLPYSFTDLQ >gi|311100538|gb|AEKO01000007.1| GENE 675 676390 - 677460 1287 356 aa, chain + ## HITS:1 COG:L61620 KEGG:ns NR:ns ## COG: L61620 COG1744 # Protein_GI_number: 15673420 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Lactococcus lactis # 3 348 1 345 350 326 58.0 4e-89 MKLNKKIIGIGLVAVAALGLAACARGGRGGSAADSKVKAAIVTDTGGVDDKSFNQSAWEG LQAWGKANKLEKDSGFTYFQSNSESDFATNMSSAVDQNYNLIFGVGFALHDAVSESAKDN EKINYVIVDDVVKDQKNVESVLFADNEGAYLAGIAAAMQSKTNKVGFIGGQKSDTITRFE AGFTAGAKSVKPDIDVQVQYAESFSDAAKGSTIASTMYASGADVIYQAAGGTGTGVFTAA KEVNEKLSADSDKKVWVIGVDRDQSAEGNYTSSDNKKSNFVLTSTIKQVGAVVKDIANDQ VKGKKFEGGKTKTYGIKDGGVDIVTSNLPSDIKDAVVKAKEQIKNGELKPTDGLSK >gi|311100538|gb|AEKO01000007.1| GENE 676 677574 - 679112 1535 512 aa, chain + ## HITS:1 COG:SP0846 KEGG:ns NR:ns ## COG: SP0846 COG3845 # Protein_GI_number: 15900733 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Streptococcus pneumoniae TIGR4 # 1 512 1 511 511 745 79.0 0 MTKPNVIEMHDITKKFGEFVANDHINLDVRPGEIHALLGENGAGKSTLMNMLAGLLQPTS GTIKVNGQAVTIDSPSKATKLGIGMVHQHFMLVEAFTVAENIILGSEVTKSGGVLDMKKA VKEITELSQRYGLAVDPSAKIADISVGAQQRVEILKTLYRGADILIFDEPTAVLTPSEIT ELLNIMRTLVKEGKSIILITHKLDEIRTVSDRVTVIRRGKSIDTVTIEGSTNADLAEMMV GRHVSFKTDKIPSNPKEVVLSIKNLVVNENRGVPAVKNLSLDVRAGEIIGIAGIDGNGQT ELVQAITGLRKIKSGDITIKGESIIHKTTRQITEMSVGHIPEDRHRDGMILEMTVAENIA LQTYYKEPNSKNGILNYNIINAKARELMNEFDVRGAGELIAGGDLSGGNQQKAVIAREID RNPDLLIVSQPTRGLDVGAIEYIRKRIIAERDKGKAVIVVSFELDEILDMSDQIAVIYDG AIQGILDPAETNKQDLGILMAGGQLNKEEANV >gi|311100538|gb|AEKO01000007.1| GENE 677 679105 - 680172 1063 355 aa, chain + ## HITS:1 COG:SP0847 KEGG:ns NR:ns ## COG: SP0847 COG4603 # Protein_GI_number: 15900734 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 354 1 352 352 397 64.0 1e-110 MSKKTQNWAVPLIAVLLGMLVGAVLMLIFGYDPFWAYYDLFSTAFGSLKNIGEILRAMSP LILIALGFSVASKAGFFNVGLPGQALAGWTSAVWFALAFPELPKVVSVFCTVIIGLVAGG IAGAIPGILRAYLGTSEVIVTIMMNYIILYVANNIVRFGFTADMLRSSEASNKVASSASY QTEFLSSLTGGSRFNIGFFLALAAVFLVWFMLKKTTTGFEITSVGLNPHASEYAGMSSKR VIIMSMIISGALCGLGGTVEGLGTFQNAFVQNSSLAIGWNGMAVALLATNSPIGIPFAAL LYGVLSVGKSGMIGVPSEVIDVVSALIIFFVGANYIIRYWVLPRHKSVKAKGGQN >gi|311100538|gb|AEKO01000007.1| GENE 678 680174 - 681130 1072 318 aa, chain + ## HITS:1 COG:SPy1225 KEGG:ns NR:ns ## COG: SPy1225 COG1079 # Protein_GI_number: 15675189 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 318 1 318 318 426 73.0 1e-119 MDFITILALIVASMLKYSAPLIFTSIGGTFSERGGIVNVGLEGIMVIGAFAGVIFNLNFA DSFGDATPWIAAIVAGLIGLVYSLLHAVATINFRADHVVSGTVLNLIAPSLAVFLTRVIF GAGQTPAISHNFKTVSFPILSHIPILGKVFFTNVSLIAYVAILVSVVSWWVIFKTRFGLR LRSVGEHPQAADTLGINVYRMRYYGVMISGFLGGVGGAVYAQSISNNFAVTTIAGPGFIA LAAMIFGRWNPVGAMLSSLFFGLSQSLAIIGKQLPVISHVPNVYLQIAPYILTIIVLAAF FGKAVAPKADGVNYIKSK >gi|311100538|gb|AEKO01000007.1| GENE 679 681238 - 681873 674 211 aa, chain - ## HITS:1 COG:SP1646 KEGG:ns NR:ns ## COG: SP1646 COG0491 # Protein_GI_number: 15901482 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Streptococcus pneumoniae TIGR4 # 1 210 1 209 209 256 60.0 2e-68 MKIKRILNPVAQENTYILENESASLVIDPGSNTSSILAELEEIAKPVVAILLTHTHYDHI ISVEAVRQAYNHPPVYVAETEKDWLMNPVHNLSGLPRHDDMEDVIVNPADYYFDFIKDYN IGNFQFKVVPTPGHSIGGVSFIFEKEETVFSGDALFKETVGRWDLPTGNHDQLLSSIQEQ LFTLPNHYRIFPGHGWDTTIGHEKVFNPHFS >gi|311100538|gb|AEKO01000007.1| GENE 680 681969 - 684455 1522 828 aa, chain + ## HITS:1 COG:SPy0649_2 KEGG:ns NR:ns ## COG: SPy0649_2 COG1199 # Protein_GI_number: 15674717 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Streptococcus pyogenes M1 GAS # 233 813 1 577 589 531 48.0 1e-150 MSEKNTNKYAIVDLEATSASSTACIIQVGIVIMQNGLVIDEFASDVNPHQELDDHIVHLT GITDQQLSQAPDFSEIARTIFELIEDCIFVAHNVKFDANLLAEALFMEGFELRTPRVDTV ELAQVFYPTLEQYKLSYLSQVLNLDLAQAHTAIEDARATGQLLFHLMDKIASLPRQTIDM LLTFSDNLLFESELVIRDAIKGKTNSLSKKYVMLEESGIVLRRPLTYMSERKLSQDFETN IALLGLKSRSKQEEFAKTVRRELDNTDISMIQAQTGIGKTYGYLLPLLAQADVDKVVVAV PTKLLQNQIISKEAKALAEVFNINFHSLKGPTNYIKLDAFYHTLLRQDSNRLINRYKMQL LVWLTETETGDLDEIKQKQRYMAYFDEIKHDGKLKADSLFAGYDFWKQSYQKGQEARVVV TNHAYLLTRMEDDHDFVRGKTLVIDEGQKMVLALEQFSRHQVNLTTLLQQIHRILDSDSQ TLLQQRLLENLQFEVSHLIQEHQRFPQKQYNRQQLNRLLQTISELEGESDVMEMLSPLNT PLYSHFWLETDYYQEHRVTYLKASRQELLKLSSYLPSAQKVLIVSATIDIGPDVDVADLL GLSQVRKVRLPMETLPNQAIWIDQTMPMIGVSSEEEYGEAIAKRLQKLSAMGYPILVLFT SRKSMIAVSDLLDHRKVHHLTQEKNGTAFNVKKRFDKGETNLLLGMGSFWEGADFAQQDK VIEVITRLPFDNPKDPFYQKIESLLSKQGRSTFDSYSLPMTVLRFKQAIGRAQRRPEQRS AILLMDNRPLVKSYGKLFIKEVSQEIILKHAPFKLLKEDIQEFLEKDC >gi|311100538|gb|AEKO01000007.1| GENE 681 684600 - 685082 548 160 aa, chain + ## HITS:1 COG:SP1545 KEGG:ns NR:ns ## COG: SP1545 COG5353 # Protein_GI_number: 15901388 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 18 160 1 143 143 100 36.0 1e-21 MRKQRQPWTKKQQLIFGMIVLVVTVIVSITAMLVVAVKPYVDAEKQVIAIAKTKADLHTV SEFNIYNGQATYYGLLGKSGQGEKLAVIVSHDSGEVDIYKQSDGISKSVAKKAAKAYGAK DISYVHLGKYGKTPIWEVKSGTQYYLVDFISGQVIKVEGL >gi|311100538|gb|AEKO01000007.1| GENE 682 685087 - 685626 629 179 aa, chain + ## HITS:1 COG:SP1544 KEGG:ns NR:ns ## COG: SP1544 COG0436 # Protein_GI_number: 15901387 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 171 2 170 395 246 74.0 2e-65 MTKLSNRVLQMEESVTLAASARAKALKAQGRDILSLTLGEPDFVTPKNIQDAAIASIENG KASFYTVASGLPELKDEISTYMENFYGYAVKPNEVVVGTGAKFILYAFFATVINPGDEVI IPTPCWVSYVDQVKMVEGVPVTFQTTEANHFKATVEQLEAARTEKLKLSCLILHQIQQE >gi|311100538|gb|AEKO01000007.1| GENE 683 685623 - 686267 796 214 aa, chain + ## HITS:1 COG:SP1544 KEGG:ns NR:ns ## COG: SP1544 COG0436 # Protein_GI_number: 15901387 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 212 179 390 395 351 82.0 7e-97 MIYSKEELQAIGDWAVEHDILILADDIYGRLVYNGNTFTPISSLSDAIRKQTIVINGVSK TYAMTGWRVGFAVGDPEIISGMAKIISQTTSNLTAVSQYAAIEALTGDQSSIEEMRQAFE ERLNTIYPLLAEVPGFEVIKPQGAFYLFPNVKKAMEIKGYTDVNDFTNAILEEAEVALVT GAGFGAPENIRFSYATDLDTLKEAVRRIKAFMEK >gi|311100538|gb|AEKO01000007.1| GENE 684 686305 - 687651 1612 448 aa, chain + ## HITS:1 COG:SPy0651 KEGG:ns NR:ns ## COG: SPy0651 COG0017 # Protein_GI_number: 15674719 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Streptococcus pyogenes M1 GAS # 1 448 1 448 448 836 90.0 0 MSKQLVSIIDVPKHVGEEITIGAWVANKSGKGKLAFLQLRDGTAFFQAVAFKPNFIEKYG EEEGTEKFDTVKRLSQETSVYVTGVVKEDERSKFGYELDVTAVEVIGESHDYPITPKEHG TDFLMDNRHLWLRSRKQMAVQQIRNAIIYATYEFFDKNGFIKFDSPILSGNAAEDSTELF ETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL SHDESLDLQEAYVKALIQGVIDRAPQALEILERDVDLLKKYIAEPFKRVSYDEAIDLLQA HENDEDTDYEHLEHGDDFGSPHETWISNYFGVPTFVVNYPASFKAFYMKPVPGNPERVLC ADLLAPEGYGEIIGGSMREDDYDALVGKMDELGMDRSEYEFYLDLRKYGSVPHGGFGIGI ERMVTFVAGTKHIREAIPFPRMLHRIKP >gi|311100538|gb|AEKO01000007.1| GENE 685 687678 - 688085 440 135 aa, chain + ## HITS:1 COG:no KEGG:stu0819 NR:ns ## KEGG: stu0819 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 135 1 135 135 174 82.0 9e-43 MKRWLLGLLALLCMVSMVACSKSAPSLQGEWKAQDALKKDYKIIFKKDKVTIGEHDYNYT VDGPKAKDNYTYYSLKVKDQGKETSYTVFFPTKSKETALFLQPNDDKEALKGQMLFALNK KENPDYYDYVKKYMK >gi|311100538|gb|AEKO01000007.1| GENE 686 688194 - 688574 514 126 aa, chain + ## HITS:1 COG:SP1567 KEGG:ns NR:ns ## COG: SP1567 COG0251 # Protein_GI_number: 15901410 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Streptococcus pneumoniae TIGR4 # 1 125 1 125 126 219 90.0 1e-57 MAKTIHTDKAPAAIGPYVQGKIVGNLLFASGQVPLSPETGEIIGETIQEQTEQVLKNVGA ILAEAGTDFDHVVKTTCFLSDINDFVPFNEIYATAFTSDFPARSAVEVARLPKDVKIEIE VIAEID >gi|311100538|gb|AEKO01000007.1| GENE 687 688748 - 689401 581 217 aa, chain + ## HITS:1 COG:SA0667 KEGG:ns NR:ns ## COG: SA0667 COG0603 # Protein_GI_number: 15926389 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Staphylococcus aureus N315 # 1 215 5 220 222 328 70.0 4e-90 MKRQSALVVFSGGQDSTTCLFWALKHYETVELVTFAYGQRHSLEIEVAKEIAQEQGLKHH VLDMSLLGQITENALTSDIEIEAEEGEVPNTFVDGRNHLFLSFAAVLAKQRGITDIITGV CETDFSGYPDCRDVFVKSLNVTLNLAMAYDFVIQTPLMWLDKAETWALADQLGAFDYVRE KTLTCYNGIIGTGCGDCPACHLRQKGLEKYLAERGEA >gi|311100538|gb|AEKO01000007.1| GENE 688 689401 - 689844 489 147 aa, chain + ## HITS:1 COG:TM0038 KEGG:ns NR:ns ## COG: TM0038 COG0720 # Protein_GI_number: 15642813 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Thermotoga maritima # 24 143 2 118 120 89 40.0 2e-18 MFFAPKEIKKETGESLVYNLHRTMVSKEFTFDAAHHLFHYEGKCKSLHGHTYHLQIAVSG YLDERGMTYDFGDLKSIYKDHLEPHLDHRYLNETLPYMNTTAENMVFWIFQTTSEYLPEE RGLRLEYVRLYETPTAFAEFRREWLDD >gi|311100538|gb|AEKO01000007.1| GENE 689 689837 - 690553 674 238 aa, chain + ## HITS:1 COG:SA0665 KEGG:ns NR:ns ## COG: SA0665 COG0602 # Protein_GI_number: 15926387 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Staphylococcus aureus N315 # 8 238 3 237 237 235 51.0 5e-62 MTRERVLKLPVLEIFGPTFQGEGRAIGQKTMFVRTAGCDYHCDWCDSAFTWDGSEKPTRM TADEVIEALDALGTYDYVTLSGGNPALLAANMAQLVSKLKARGVTLAVETQGSRWQEWLK DIDQVTLSPKPPSSKMEVNMEILDFIVSQLDPDKLTFKVPVFDDADLAFAKMIQERYQPD VMFLSAGNPEPKAEGNIVQHQLDRLKELWETVAADDSWGNVRVLPQLHTLLYDNERGV >gi|311100538|gb|AEKO01000007.1| GENE 690 690675 - 691166 595 163 aa, chain + ## HITS:1 COG:SA0683 KEGG:ns NR:ns ## COG: SA0683 COG0780 # Protein_GI_number: 15926405 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Staphylococcus aureus N315 # 3 163 6 166 166 253 74.0 1e-67 MSQQEEMKNLTLLGNKETPYIFEYSPQVLEPFDNRHTDNDYFIKFNCPEFTSLCPITGQP DFASIYISYIPDQLCVESKSLKLYLFSYRNHGDFHENCINTIGKDLVELLNPRYLEVWGK FTPRGGISIDPYYNYGRPETKYEKMAEQRLFNHDLYPENIDNR >gi|311100538|gb|AEKO01000007.1| GENE 691 691400 - 691558 126 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKSLRLISCVVLGAAILAPMVVGKDHAEADTYYGNGYTYNSWYNNYYSEYN >gi|311100538|gb|AEKO01000007.1| GENE 692 691619 - 691876 61 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477538|ref|ZP_04062171.1| ## NR: gi|228477538|ref|ZP_04062171.1| SCP-like extracellular protein [Streptococcus salivarius SK126] # 1 75 120 194 651 105 77.0 1e-21 MYYILSDSSYYVSYNGCWVRGGDYNNNNGGFNNTLMIGYEILRNAPHYRYENDIHYYLKD DVDYYYYSNGKRVLLNIKAQILKLQ >gi|311100538|gb|AEKO01000007.1| GENE 693 692020 - 692274 245 84 aa, chain + ## HITS:1 COG:no KEGG:SGO_0847 NR:ns ## KEGG: SGO_0847 # Name: not_defined # Def: SCP-like extracellular protein # Organism: S.gordonii # Pathway: not_defined # 11 84 236 309 475 76 55.0 3e-13 MYSDPRFVDNNSTASDNPELNPEFHNSVENDEYMYDNNASSVKLYFENVVGIGEAGEDLP FQNVDEFRGYVINNFAPKFIDNAG >gi|311100538|gb|AEKO01000007.1| GENE 694 692873 - 693643 588 256 aa, chain + ## HITS:1 COG:L90946 KEGG:ns NR:ns ## COG: L90946 COG4420 # Protein_GI_number: 15672474 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 18 239 23 247 290 184 44.0 1e-46 MQVKRVQDYISKEWFDETDGSYFERLNSRLQVLLRKDYPDLKGHDFISNISLLDYRLVFL DEVISNANEKNEHVRETVHDVTKSLLYEDQDVQEQLDSRITFGQKVADEVARFGGSWTFI LSFIAFMGIWMGLNVVQPFGIAFDKYPFILLNLALSTLAAVQAPLIMMSQNRASDYDRLQ ARNDYHVNKQSKEEIRLLHEKIDHLVQQDQSDLLTIQKLQTEMLMAVSQQVEKISDDIRV LKEMRLERETHEDKDN >gi|311100538|gb|AEKO01000007.1| GENE 695 693624 - 694514 714 296 aa, chain + ## HITS:1 COG:SPy0652 KEGG:ns NR:ns ## COG: SPy0652 COG1660 # Protein_GI_number: 15674720 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Streptococcus pyogenes M1 GAS # 1 296 1 296 296 463 76.0 1e-130 MKTKIINLVVVTGMSGAGKTVAIQSFEDIGYFTIDNIPPSLVPKVIELLKHSEETDKIAL VVDMRSRVFFDEINDILDQLESNEELNFKILFLDATDGELVSRYKETRRSHPLAADGRVL DGIKLERELLSPLKSLSQNVVDTTELTPRQLRKAISEQFSSEQDQSSFRIEVLSFGFKYG LPLDADLVFDVRFLPNPYYDPTLRNLTGLDREVYDFVMTHKESEDFYKNLSHLIKPILPG YQKEGKSVLTIAVGCTGGQHRSVAFAHRLAQDLKNDWTVNETHRDKDRRKETVNRS >gi|311100538|gb|AEKO01000007.1| GENE 696 694511 - 695485 763 324 aa, chain + ## HITS:1 COG:SPy0653 KEGG:ns NR:ns ## COG: SPy0653 COG0391 # Protein_GI_number: 15674721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 321 1 321 325 510 79.0 1e-144 MKKPRITVIGGGTGIPVILRSLRHKDVDITAVVTVADDGGSSGDLRDIMKLTPPGDLRNV LVAMSDMPKLYERVFQYRFDQTDGALAGHPLGNLVIAGISEMQGSTYNAMQLLTKFFHVT GKIYPASETALTLHAVFQDGHEVAGESSISQYDGMIERVYVTNTYNEEVPKASRKVVDAI MNSDMIVLGPGSLYTSILPNLVIPEIRQALLETKADVTYICNIMTQYGETEQFSDADHVA VLNRHLGSNVIDNVLVNIKKVPQEYMASNKFDEYLVQVEHDFEGLRREAKTIVSSNFLRL ENGGAFHHGDLVVEELMHLVRKKS >gi|311100538|gb|AEKO01000007.1| GENE 697 695482 - 696393 604 303 aa, chain + ## HITS:1 COG:SPy0654 KEGG:ns NR:ns ## COG: SPy0654 COG1481 # Protein_GI_number: 15674722 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 303 1 303 303 427 71.0 1e-119 MSFTIKVKEEIIAASSKDIAELSALIKMSGSVGLTNQGLTLSISTENAKIARHIYQLIEN RYHCNPALRHYNKTNLKKNRVYTVFVAENVNDILSDLQLADSFFGFETGIETSIMEDDEA GRSYLRGAFLATGTVRDPEKGRYQLEIFSIYQDHAEDLASLMKKFMLDAKVLSHKNGFVT YLQKAEDIMDFLIVIGAMTSKEIFEEVKIMRETRNDLNRANNAETANIARTISASMKTIN NIIKIMDTVGLEVLPVELRQIAQLRIANPDYSIQQIADSIEPPLTKSGVNHRLRKINKIA DDL >gi|311100538|gb|AEKO01000007.1| GENE 698 696411 - 697808 1370 465 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 465 9 472 472 731 74.0 0 MACTTILVGKKASYDGSTMIARTEDSQSGVFTPKEFLVVTPEDQPRHYQSVLSKFSIDLP DNPLRYTSVPDALGKDGIWGEAGINSANVAMSATETITTNARVLGADPLVKDGFGEEDML TLVLPYIKTAREGVLRLGELLETYGTYESNGIAFADTEEIWWLETIGGHHWIARRVPDDA YVTNPNQLGIDHYEFENPDDYLASPDIRDFINKHHLDLTYSNEHFNPRYAFGSQRDKDRH YNTPRAWAMQKFLNPEKDYDPKSFFIPWCQKPYRKITVEDVKYVLSLHYQDTPYDPYGPQ GDMVSQRQFRPIGINRTSQTALLQMRPNKPSETTGIQWLAYGSMPFGTMVPFWTQVGTTP AYFRQTTDKVDTGNFYWSNRLIAAICDPHFQQHEADLDDYVETTMALGHAMINRVDTALE NDESIDFETENQKISDQIQLETDKLLAKVLNDASNLMTNRFSMSD >gi|311100538|gb|AEKO01000007.1| GENE 699 698780 - 698998 190 72 aa, chain + ## HITS:1 COG:SPy1336 KEGG:ns NR:ns ## COG: SPy1336 COG2801 # Protein_GI_number: 15675275 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 71 197 267 268 101 74.0 4e-22 MSRKGNSPYNGMMESFFCILKSEMFYGYEKMFKLIEHLKQAIVGYIDYYNNKRIKVKLKG LSPVQYRTKSFG >gi|311100538|gb|AEKO01000007.1| GENE 700 699056 - 699877 788 273 aa, chain - ## HITS:1 COG:SP0026 KEGG:ns NR:ns ## COG: SP0026 COG2339 # Protein_GI_number: 15899973 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 69 267 5 201 207 145 39.0 6e-35 MVRKLTLYLFLFLSAIGLTYDTQSYTSGALSGSAYGIIGLSTLIALCYIIPAIFLIQFLG KKWQVKPLVLVFALIGGLFITGWLAGYANTFSHEWVTAHLSSKNFFYRFEDAIMAPLVEE PLKLAAFIFAVYMVPTKSYKGLLLVAITAGLGFQISEDFSYILSDLPDGFSYTISGILGR SIGAISSHWLYTSFLAMGLVLIWRSHQKLIHQKYRLIGIFYACGAFASHFAWNSPLRTLE SDLPWASGLLISLNLFFFISLYQLLSKLDKENK >gi|311100538|gb|AEKO01000007.1| GENE 701 700034 - 701578 1395 514 aa, chain + ## HITS:1 COG:SPy0714_1 KEGG:ns NR:ns ## COG: SPy0714_1 COG0803 # Protein_GI_number: 15674772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pyogenes M1 GAS # 3 316 2 321 322 317 52.0 4e-86 MKKKRIFGIAGLAAVVLAASAGIYYTTSQHDSKGNGDLKVVTSFYPVYEFTKQVVGDEGE VSYLIPAGSEAHDFQPSTKNVADIEKADTFVYLNENMETWVPKIEKTINTKNTKVIEASK GMVLLPGTEEEDHDHGGEEHHHEYDPHVWLSPKRSQKLVKTIRDGLIAQHPDKKAVFTTN AEKYLKKLQALDKEYTEALSHTKQKSFVTQHAAFAYLALDYGLTQVPISGVSAESDPSAK RIASLSKYVKEYDINYIYFEENASSSVAKTLANEVGVKTAVLNPIESLTKEQLKKGEDYV SVMTENLKNLRLTTDVEGKAIQPETGSDDKKTVQNGYFDDKDVKDRELSDWSGKWQSVYP YLQDGTLDQVFEYKSLLNKDKTAQEYKEYYTKGYQTDVSKIAIDGKKMTMTFTKNDGSSV THTYRYDGYKILTYASGKKGVRYLFTATDSQAADNPYQYVQFSDHQIDPTSAAHFHIFFG NSSQEQILKEMDNWPTYYPGKLSGFEIAQEMVSH >gi|311100538|gb|AEKO01000007.1| GENE 702 701799 - 702197 440 132 aa, chain + ## HITS:1 COG:no KEGG:str0861 NR:ns ## KEGG: str0861 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 132 1 132 132 232 97.0 4e-60 MNQYLVAIHYIQLLQAELNILNRDARLLFDLKIDPNLAKRELADLKVSLSKLSDKNLYIE GTIWYQPSLFAIIDQNLGVIDDWLKELDDFFEFSYGTTVYTVLKENENRSYDLLLGLYSR LEYVISDIKNCR >gi|311100538|gb|AEKO01000007.1| GENE 703 702440 - 702637 80 65 aa, chain - ## HITS:1 COG:SPy0732 KEGG:ns NR:ns ## COG: SPy0732 COG3547 # Protein_GI_number: 15674786 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 51 144 194 196 77 76.0 5e-15 MFKCIHNIASASHTNLCHIADFYEKRKRQSTIASTKPHTIASIHRLIRTMYYLITHNKLY DYSLA >gi|311100538|gb|AEKO01000007.1| GENE 704 702712 - 702888 82 58 aa, chain - ## HITS:1 COG:no KEGG:str0744 NR:ns ## KEGG: str0744 # Name: not_defined # Def: truncated IS1193 transposase # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 2 49 6 53 73 64 72.0 1e-09 MNTTELIGIKDPNIITSLVFEKDIYIEVQAKLERQLYYVCRNVAFSLPIKSTLLLALT >gi|311100538|gb|AEKO01000007.1| GENE 705 703304 - 703792 582 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYSRMEKFHGRKAQRFSIRKYSFGAASVLLGTALFLGANGVRADEATPSVNPATSGLSNS DKNVSGSTLSTPVVEKLPELKIDAVKADENAEVKEESKNEVTTVAEKEVTEATTDKTDKK TETDVKEKSDKEHADKTEADKEKLKKLKQKKHKMMLRQFLLN >gi|311100538|gb|AEKO01000007.1| GENE 706 703810 - 708492 5700 1560 aa, chain + ## HITS:1 COG:no KEGG:smi_1064 NR:ns ## KEGG: smi_1064 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 723 1410 941 1652 1702 368 40.0 1e-99 MATVASNFSDKEVTGVEDKQNLSAAITAVKLEATASKELLLSDASKDQMVAQVNRLSDAI EAVYAEMKRAGHAGKVEAVLDDATTQDQKIVGKDVVKDGQKVKSVTNGYITMNADNTAPK AWGFDSTFDTSDLQAGDITKIEVTNLAEFGAAFPVGKEITAADGTVIGKVKSIDYKTSTG NNNNKSVPYWAQRTQRGMTYDERVAEQPAIANETGTYTYNIEWNEKAKDYPNISFGAENL SGGGYLAPQISKDTDYKATIKIDGRTVVEHTYTRKGQQATFSKQGTSASLRTNNGLGYVS NELKSKSDTLEINTDSDIRYGVGSKFTIKLPNSEFTEFKELEGSTNFVNGLNTASTLNPN KGDSITYRLANRWANVKANENNVWILQDGREGGFTLTPKLISPTELEVTVTEGYIQEGSN ISLSLQSLGVEKVIKDKTLTSEFSNVTYNEFGIITGGTAGNDKTAATLTVSGGTSINGEK EDVTTTVANGWEINASGTPLGEPPTGAVVIGLKDLETGKIIGHATTKYDGNRPLNEDGTK DNTNVLGKKYDVSDYIPPLIKEVDGEEYILANIPTTGIEGTLSVTNTRARDLYSTEELKE NGLNASAYVTPVDYNYVKKTRVEEVNRTIKYVYADDAQGLAGQQVFDPTTQTVSYKGTVK TNAEGKAEIGSNDKPIYINWKGIGDTNLPEVTVPQKEGYIASVEKVPVQPTTATDEDYEY VVTYSPIQKAKTTFVYQDKDGNVKQVEGNTPISETGKGGDKLTKADEIAAKIKEAQNKGY ELVSNTYPTDGAFDKDVNTDQEFTVTLKERVVPVTPDQPKTPGTPVDPNNPDGPKYPAGL EEKDLNKIVTRTITYVYEDGTPVLNEDGTPKTVTQEAKFTREAKVNLVTGEVTYGDWTPA QDLAEVKSPVVKGYLADKASVAMVNVTGDSEDIKEVVTYKPLGSWVPNIPGQPTDPIKYP NDPTDPTKPGNDKPVLPYVPGMTPKDKDGNPLKPVDPNDPTKGYEVPNVPTNPDENTPIN YVKDTQKAKTTFVDEKGNSIPGVDAITEEGDSDTPLTKEADVKAKIKELENKGYELVSNT YPEGGKFDKDKDTDQEFTVTLKERVVPVTPDQPKTPGTPVDPNNPDGPKYPAGLEEKDLN KTVTRTITYVYADGTPVLNEDGTPKTVTQEAKFTREAKVNLVTGDVTYGDWTPAQDLAEV KSPVVKGFLADKASVAVVNVTGDSEDIKEVVTYKPLGSWVPNIPGQPTSPIKYPNDPTDP TKPGQPTETLPYVPGFTPEDKDGNPLKPVDPTDPTKGYVVPNIPTDPSQDTVINYVANKA KLVVKYVDENGKDLIPAETTEGKVGDEYTTSGKVIPGYVLVRVDGEAKGKIGTDGSTVTY VYTPLGSWVPNIPGQPTSPIKYPNDPTDPTKPGSDKPVLPYVPGYTPVDGNGQPLKPVDP NDPTQGYEVPNVPNDPTKDTPINYVPAPQPNPTPAPTPKPEPKPETPQPVTPADNGDNNG NNNETPTTPAQPAAPSTPQYMDGQRELPNTGTEDNASLAALGLLGVLSGFGLVARKKKED >gi|311100538|gb|AEKO01000007.1| GENE 707 708587 - 709843 518 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 481 62.0 1e-135 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLRLKKRRFQCKSCRRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGKLAFVAQNYETNELIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAKIVLDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100538|gb|AEKO01000007.1| GENE 708 710557 - 712293 175 578 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 332 565 9 235 309 72 26 6e-11 MAYIWSYLKRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDADKLYTYAWVMF GVVLTGIVGRVLLAYAVGKLTTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDA FVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVAISLPFLAVVVWYVAVKTRPL SEKQQTTLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE PLFVQIIIAMIVAIVWFALERLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTA VSSERLQEIMDMPISINPNEDGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPG ETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRDYNLKALRRKIGFIPQKALLF TGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIV LDKGEIVGCGRHEELMESNDIYREIANSQLNQKSLTED >gi|311100538|gb|AEKO01000007.1| GENE 709 712306 - 714093 189 595 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 371 577 16 226 245 77 27 1e-12 MKNNKKKTTHSSSFGRLWSYLQVYRFPLYLAIFLKIISVTMSVIEPVVIGLAITELTKNT LDIIKGVEGAHINVSYVGLVLVFYLLRGLIYELASYYSNYFMTNAVQATVQDMRNEMTEK INRTSVSYFDKQQFGDLLGRFTSDVETVSNALQQSFLQVVNAVFTLALVIGTVLYLNLQL GAIVVITIPVTFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAF VQYVWQINQPIQNLTQLAGQLQSAKSSLDRIFQLMDEPDEVNDATEVLEGELTGQVSFNH VEFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIINLLMRFYDVTAGSISVDGHDI RNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQ GRTSFVIAHRLSTIQEADKILVLKDGQIIEQGNHESLLADKGFYYDLYNSQFSEK >gi|311100538|gb|AEKO01000007.1| GENE 710 714193 - 715236 1057 347 aa, chain - ## HITS:1 COG:SPy1400 KEGG:ns NR:ns ## COG: SPy1400 COG0809 # Protein_GI_number: 15675321 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Streptococcus pyogenes M1 GAS # 1 341 1 341 342 602 85.0 1e-172 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTKEMTDTHFDHIIDQLNPGDALVMNN TRVLPARLYGEKNDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSFGDGRLTATVT EELDHGGRIVEFSYNGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTA GLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEMHSEFYTLSQEAADTLN SVKATGGRIVAVGTTSIRTLETIGNKYNGRLQAESGWTNIFIKPGYQFTVVDAFSTNFHL PKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRRAGK >gi|311100538|gb|AEKO01000007.1| GENE 711 715358 - 716089 738 243 aa, chain + ## HITS:1 COG:SP1415 KEGG:ns NR:ns ## COG: SP1415 COG0363 # Protein_GI_number: 15901269 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Streptococcus pneumoniae TIGR4 # 11 243 1 233 233 301 66.0 1e-81 MVYTNIEVNRMKKILVKNQVEGGQVAFELLKESLAAGAQTLGLATGSSPIALYQEMVESD VDFSELYSVNLDEYVGLAPDHEQSYHAFMKAQLFDAKPFKESFMPDGMAEDLEKAAKDYD DILLHHTIDLQILGIGSNGHIGFNEPGTPFDSQTHVVDLTDSTIEANSRFFASRDQVPTK AISMGIASIMAAKKIILFAYGDKKADAIFKMVKGPVTEEVPASVLQNHPDVTLILDQAAA AKL >gi|311100538|gb|AEKO01000007.1| GENE 712 716279 - 717262 967 327 aa, chain + ## HITS:1 COG:SP0095 KEGG:ns NR:ns ## COG: SP0095 COG1054 # Protein_GI_number: 15900038 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 323 1 323 328 634 92.0 0 MAKPIRVLLYYKYLPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKY MDYVHSLPGMEDLWFKIDEEEEQAFKKMFVRYKKEIVHLGLEDDNFDSDINPLETTGAYL SPKEFKDALLDEDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDHKEEFMDKRV VVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVD INHVDPIVVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRY VSENGLSQEDVVERLEAIGESLDVTPA >gi|311100538|gb|AEKO01000007.1| GENE 713 717380 - 718063 611 227 aa, chain + ## HITS:1 COG:L104065 KEGG:ns NR:ns ## COG: L104065 COG1814 # Protein_GI_number: 15673456 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Lactococcus lactis # 8 223 10 225 226 157 37.0 1e-38 MEDKNFAERLNILRAGVLGANDGIISIAGVVIGVASATSNIWFILISALSAIFAGAFSMA GGEYVSVSTQKDTEEAAIAKEQALLDRSPEAARESLYQTFLSQGDCETAAEVKVNQAFSK NPIKVLVEEKYGVDLEEITNPWHAAISSFFAFSVGSLPPTLAIMLFPEPYRIPVTVVVVA LTLLLTGYISAKLGKAPIKQAMLRNLTVGLLTMLVTYVVGQVFHVNV >gi|311100538|gb|AEKO01000007.1| GENE 714 718144 - 718863 573 239 aa, chain + ## HITS:1 COG:SP0680 KEGG:ns NR:ns ## COG: SP0680 COG1187 # Protein_GI_number: 15900581 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pneumoniae TIGR4 # 1 238 1 237 241 231 51.0 9e-61 MRLDKLLGQAGYGSRNQVKKLIRSRQVYVDGILADRDNLNVDASLQTITVSGKELEHTPE VYYLMNKPAGVVSARSDKEHQTVIDLIKPEDQRDGLYPVGRLDRNTEGLVLITNNGPLGF AMLHPGYHVAKTYYVEVNDILGPDAPAFFESGVVFEDGTICKSAQLEILSSASDKSCARI TISEGKFHQVKKMFLAYGVKVTYLKRISFGAFKLDEGIAVGSYRVLTEAEKVILRTYLG >gi|311100538|gb|AEKO01000007.1| GENE 715 719109 - 720254 1239 381 aa, chain + ## HITS:1 COG:L182020 KEGG:ns NR:ns ## COG: L182020 COG1473 # Protein_GI_number: 15672938 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Lactococcus lactis # 1 377 2 379 379 384 51.0 1e-106 MTEAFYDHLAKTRHQIHQHPEVSEEEHETTVFLKSYLKNLGIEPLNYPLKTGVIAEFGSG HPIIALRADIDALPIKEKTGLPYASDNGAMHACGHDFHQTSLLGAAQLLKEREAELKGTV RLIFQPAEENFQGAYQVIEAGGLDGVSAIIGYHNNPHLKPGQIGLRSGAIMAGVEQFRVD VKGVSSHAARPDLGVDTVLVITTIINNLQQIVARTVSPFESAVLSVTHIEVGNTWNVLPA AGFFEGTIRTFEPTVREAVIARFEKVVQATADQFGAQVDITWGNSPYVTYNDYTLTPLIF ENSKSFAEVIETLPSTGGEDFAAYQKEIPGVFAFVGSNGEEDAPDWHHDDFLVKDEALPV AVNYYVENALFLLDYFKEQDD >gi|311100538|gb|AEKO01000007.1| GENE 716 721012 - 722328 487 438 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 437 1 449 458 192 30 4e-47 MVNYDLIVIGFGKAGKTLAAKMNAAGKKVAVIERSKAMYGGTCINIACIPTKTMIVAAEK GWSFDDTMKERGAVTGRLNAKNYKMLADNGVDVIDAEAHFVSNKVIEVVAGDDRQELTAE TIVINTGAVSNVLPIPGLTTTKHVYDSTGIQTLEALPKRLGVLGGGNIGLEFAGLYNRLG SQVTVLDAATSFLPRVEPSIAKLAKEYMEEDGIVFEQGVKTSELKNDGDEVVVVTDKGEF RFDALLYATGRKPNIEPLHLENTDIALTERGGIQVNKHLETSVPGVFAVGDVNGGLQFTY ISLDDFRIVFNYLTGDGSYNLETRGVVPTAMFLNPPLAQVGLTEDQAKEQGLPVAVKEMP VAGMPRGHVNGDLRGAFKAVVNPETKEILGVTLFGQESHEIINLITLAMNHHIPYTDLAK QIFTHPTMAENLNDLFAI >gi|311100538|gb|AEKO01000007.1| GENE 717 722579 - 722857 133 92 aa, chain - ## HITS:1 COG:SP0260 KEGG:ns NR:ns ## COG: SP0260 COG3575 # Protein_GI_number: 15900194 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 86 100 185 190 102 47.0 1e-22 MNKHSPNTEKYVSSTDAVSKFPEKCTAIAARLNDNQELEVFIPFGIDDLVNFRVSPTPHY FSDKDRQTVYNERVKKKNWNTFWPNISIEFIK >gi|311100538|gb|AEKO01000007.1| GENE 718 723405 - 724283 653 292 aa, chain + ## HITS:1 COG:SP0381 KEGG:ns NR:ns ## COG: SP0381 COG1577 # Protein_GI_number: 15900304 # Func_class: I Lipid transport and metabolism # Function: Mevalonate kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 292 1 292 292 336 60.0 3e-92 MTKKVGVGKAHSKIILMGEHSVVYGHPALALPLKDIEVVCQIQAADTPLTLKAQDPLTTA IFSALNYLEIKNQPISYDISSSVPEKRGMGSSAAVAIAAIRAVFDYFDQELSQETLEMLV HQAETIAHSKPSGLDAKTCLSDQAISFTRNIGFKEIEVNLGAYLVIADTGIHGNTREAVE KVEAIGLDALSDLNRLGELSQQAELALKAKDQKLLGQLMSQAHNHLKSLGVSCDLSDLLV ATALDHGAQGAKMSGGGLGGCIIALTSTKDQAQTIAKKLQEKGAVNTWIESL >gi|311100538|gb|AEKO01000007.1| GENE 719 724265 - 725209 785 314 aa, chain + ## HITS:1 COG:SP0382 KEGG:ns NR:ns ## COG: SP0382 COG3407 # Protein_GI_number: 15900305 # Func_class: I Lipid transport and metabolism # Function: Mevalonate pyrophosphate decarboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 311 1 311 317 387 68.0 1e-107 MDRKPVSVKSYANIAIVKYWGKADAERMIPSTSSISLTLENMYTETKLSFLPEDATGDVM YIDDELQGEKETTKASKVLDLFRTNPNQHVKIETCNNMPTAAGLSSSSSGLSALVKAANE LFQVGKTQSELAQIAKFASGSSSRSFFGPLSAWDKDSGEVYQVETDLKLAMIMLVLTDQK KPVSSRDGMKLCTETSTSFPEWIKQSEQDYKDMLAYLKANDFQAVGELTEANALRMHQTT STANPPFSYLTEASYRAMDKVKALRASGEQCYFTMDAGPNVKVLCLEEDLDRLSDHFRKD YQVIVSRTKELPDA >gi|311100538|gb|AEKO01000007.1| GENE 720 725202 - 726197 824 331 aa, chain + ## HITS:1 COG:SPy0878 KEGG:ns NR:ns ## COG: SPy0878 COG1577 # Protein_GI_number: 15674903 # Func_class: I Lipid transport and metabolism # Function: Mevalonate kinase # Organism: Streptococcus pyogenes M1 GAS # 11 330 6 328 335 308 52.0 1e-83 MLKQSVSRARVKTGGKLYIAGEYSVLTPGQTSLIQFIPIFMSAEIKKAQTTQLTSDMFDY SVDREPDVNYALIQEALNTFEAYCGEKLPALDLSITGKLERDGVKFGIGSSGSVVVLTFK ALAAALQKDLSKDSLFKLASYTLLKQGDNGSMGDLACIVYEDLISYRSFDRAKIAELIDQ MTLSELLEIDWGYHISPVVSVLKARFLVGWTKQAAISKDMVKMAKSRISSKYLSETEVAV QDAIKALETGNKNLLKSSLQTVSDQLESLSQNIYVDKLKKLKEAEQGLDVIAKSSGAGGG DCGIAFAFDQASRDALVERWQQAGIELLYEL >gi|311100538|gb|AEKO01000007.1| GENE 721 726245 - 727252 979 335 aa, chain + ## HITS:1 COG:SPy0879 KEGG:ns NR:ns ## COG: SPy0879 COG1304 # Protein_GI_number: 15674904 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 326 1 326 329 494 70.0 1e-140 MTNRKDDHIHYALKYESPYNSFDDMELIHKSLPTYDLDQIDLSTHFAGRDWKFPFYINAM TGGSAKGGAVNRKLAEVASRTGILMVTGSYSAALKGEAPESFDYRQEFPDLDLATNIGVD KSVDLGLKTVEAMDPVFLQLHVNLMQELLMPEGERIFHTWKENVATYAQKIEVPLVLKEV GFGMDEKTIRYAMSQGIKTVDISGRGGTSFAYIENSRGGNRDYLNDWGQSTVQTLLQSQD LREDVEILASGGVRNPLDMVKCLVLGAKGVGLSRTVLELVERYPVDKVVAIINGWKDDLR LIMCALDCRTIDELKSVDYILHGKLQGTYVKQEKS >gi|311100538|gb|AEKO01000007.1| GENE 722 728019 - 730679 2580 886 aa, chain + ## HITS:1 COG:L85514 KEGG:ns NR:ns ## COG: L85514 COG0474 # Protein_GI_number: 15673239 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 7 886 26 910 910 938 54.0 0 MSTNKERLIAALQEPLETTLTRYKTHLDGLKEDQVEENRALYGENVITKGQEDSIIKKIY ESIINPFTVILLVIALVSFITNVWLAKPGEEDPTTSIIIVTLVLISGGIRFIQELRSDKA ASNLSRMIVNTATVLRDGSEQENPIDEIVVGDVVKLSAGDMIPADVVLLDSRDFFVQQSG LTGESDAVEKACLAKADGQNLESLLESESLAFMGTNVISGRATALVLVVGDETMMGAIEQ TINTYDEQTSFEREMNSISWLLIRLMLVMVPVVFVINGLTDGDWLEAGVFALSVGVGLTP EMLPMIITASLAKGSIIMAKEKVVIKKLNAIQDLGAIDILCTDKTGTLTQDEIVLEYPLD IHGDLDLSVLRRAYLNSYFQTGLKNLMDRAIISRTEREAKKHDIVRDLDQTFHKIDELPF DFERRRMSVIVQDTDGLVSMVTKGALEEMLSVSNYVEYKGDIIPLTDDVREEVLTEVAQL NEQGLRVLGVSYKSQLNENDVFSVEDESDMILTGYLAFLDPPKPSAAPAIKALAEYGVTT KILTGDNDKVTQAVCEKVGLDVTHILLGSDLDTMSDQDLAKAVETTTVFAKLSPDQKARI ILSLKENGHKVGYMGDGINDAPSMKVSDVGISVDTAVDIAKETADVILLDKDLMVLEKGL VEGRKVYANMTKYIKMTVSSNFGNIFSLLFASIFLPFLPMAPVHLIVLNLVYDISCIALP FDNVDKEFLKEPHIWEAKSIMRFMAWIGPISSVFDILTYILLYFIIVPMILGHGYVHGSP EAAAFIIIFQTGWFIESMWSQTMVIHMLRSPKLPFIQSHPALSVVVTTLFAAFFVTALPY SPLAGLLKLSHLNGLYFILLFIIITLYMLSVTFVKHIYIKKYKEWL >gi|311100538|gb|AEKO01000007.1| GENE 723 730968 - 732350 1731 460 aa, chain + ## HITS:1 COG:SP0988 KEGG:ns NR:ns ## COG: SP0988 COG1207 # Protein_GI_number: 15900863 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Streptococcus pneumoniae TIGR4 # 1 459 1 459 459 689 78.0 0 MSNYAIILAAGKGTRMKSDLPKVLHKVSGITMLEHVFRAVSAIEPAKNVTVIGHKAELVR EVLDGQSVFTMQTEQLGTGHAVMMAEEELAGLEGRTLVIAGDTPLITGESLKNLIDFHVN HKNIATILTATADNPFGYGRIIRNENGEVTKIVEQKDANEFEQQVKEINTGTYVFDNKRL FEALKNINTNNAQGEYYLTDVISIFRENGEKVGAFTLRDFEESLGVNDRVALATAEDVMR RRINKTHMINGVTFQNPNATYIDVDVEIAPDVVVEANVTLKGQTKVGAESVLTNGTYIVD STIGANTVITNSMIEHSVVKKGVTVGPFAHIRPDSMLKEGVHIGNFVEVKGSTIGENTKA GHLTYIGNAEVGSDVNFGAGTITVNYDGQHKFKTQIANNVFIGSNSTLIAPLEIGANALT AAGSTITDDVPADSVAIGRGRQVNKEGYAIKKPHHPSQQK >gi|311100538|gb|AEKO01000007.1| GENE 724 732430 - 732978 693 182 aa, chain + ## HITS:1 COG:SPy0444 KEGG:ns NR:ns ## COG: SPy0444 COG0494 # Protein_GI_number: 15674568 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 182 1 183 184 238 68.0 6e-63 MEFEEKTLKRESKFKGHIFEVAVDEVLLPDGKTAGRELIFHKGAVAVLAVTPKGKIIIVK QYRKAIEAVSYEIPAGKLEVGEAGDEMAAAARELEEETQYKGELKLIHEFYTAIGFCNEK IKLYVATNLQPVENPRPLDEDEFLEIYELTYEECMELVASGAIQDAKTIIALQYYALHFG GK >gi|311100538|gb|AEKO01000007.1| GENE 725 732982 - 733242 447 86 aa, chain + ## HITS:1 COG:no KEGG:str0565 NR:ns ## KEGG: str0565 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 86 1 86 86 110 97.0 1e-23 MSKPLLTDDVIEQAKRGEIDLEDYPYYQDYEEEFYAEDYEANYQPSAYKSRRIENAKRNQ FQHKLNRILFWIVVLLIILIVAVFYF >gi|311100538|gb|AEKO01000007.1| GENE 726 733310 - 734002 972 230 aa, chain + ## HITS:1 COG:SP0991 KEGG:ns NR:ns ## COG: SP0991 COG0775 # Protein_GI_number: 15900866 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 1 229 1 229 230 283 69.0 2e-76 MKIGIIAAMEQELVLLVEQLENKVEEIVLGNIYYTGRLGKHDVVLVQSGVGKVMSAMSVA VLADHFEVDALINTGSAGAVAPGLKIGDVVVASKLAYHDVDLTAFGYDYGQMSMQPLYFE SDSTFVETFEKVLAQASIDSKIGLIATGDSFIAGQDKIDAIKGHFPEVLAVEMEGAAIAQ AAHSVKKPFIVIRAMSDTAAHDANITFDEFIIQAGKQSAAILVEFLKELA >gi|311100538|gb|AEKO01000007.1| GENE 727 734446 - 734685 150 79 aa, chain + ## HITS:1 COG:SP1064 KEGG:ns NR:ns ## COG: SP1064 COG1943 # Protein_GI_number: 15900934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 79 79 157 157 134 79.0 5e-32 MGYLKGKSSLMIFDRHANLKYKYGNRKFWCRGFYVDTVGQNQKRIEEYIRNPLQEDMIAD QFSIFEECDSFTGEKNKRK >gi|311100538|gb|AEKO01000007.1| GENE 728 734918 - 735916 968 332 aa, chain + ## HITS:1 COG:SPy0515 KEGG:ns NR:ns ## COG: SPy0515 COG0438 # Protein_GI_number: 15674619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 332 1 332 332 422 60.0 1e-118 MKVLLYLEGKSVLEKSGIGRALHHQMRALDLAGIPYTTDILGDYDVVHINTYGPRSLMLL HAAKRRGKKVIMHGHSTREDFENSFIGSNFMAPLFGKYLAHMYQKADYVITPSEYSKKLI QSYGVTTPIIAVSNGIDLKKYGKDPRKEEVFRDYFGIEKGQPVVICAGLYFQRKGIEDFV KVAEKMPHVRFIWLGSISKWLIPKKIRDIVNGKHPDNVGFPGYFKGAVFQGAMSGANAFF FPSYEETEGIVVLEAFASHQHVVLRDIPVYEGWVDEKSASFGHNVDEFVVALQDIIDGKV DKREAGYKVAESRSIDDVAQKLVKAYKEVLEI >gi|311100538|gb|AEKO01000007.1| GENE 729 735917 - 737239 1169 440 aa, chain + ## HITS:1 COG:SP1076 KEGG:ns NR:ns ## COG: SP1076 COG0438 # Protein_GI_number: 15900945 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 437 1 437 441 658 74.0 0 MRIGLFTDTYFPQVSGVATSIRTLKTQLEKMGHSVFIFTTTDRDVDRYEDWQIVRIPSVP FFAFKDRRVAYRGFSKALEIAKQYKLDIIHTQTEFSLGLLGIAIARELKIPVVHTYHTQY EDYVRYIAKGMVIRPSMVKYIVRGFMSDLDGVICPSEIVYDLLLKYKIAAEKRVIPTGIE LEKFQRPEITEEDVADLRAKLGIASNETMLLSLSRVSYEKNIQAVLAALPSVLGEDDKVR LVVAGDGPYLPDLKSQAKKLGVLDKVVFTGMIAPGETALYYKAADFFISASTSETQGLTY LEALASGTPIIAHGNPYLDNVITDQMFGTLYYHDNDLAGAILEAAIATPEKDETKWAEKL YEISAENFGKRVYEYYLDLTISKDFHNDLNGEGSTMKRLTRMVTYLPTKAITLPVNGSVR IIKGSAKQVKKIRNITKLLD >gi|311100538|gb|AEKO01000007.1| GENE 730 737572 - 737895 522 107 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|111657538|ref|ZP_01408279.1| hypothetical protein SpneT_02001260 [Streptococcus pneumoniae TIGR4] # 1 107 1 107 107 205 92 3e-51 MDLQELVERSWAIRQAYHELEVKHHDSKWTVEEDLLALSNDIGNFQRLVMTKQGRYYDET PNTLERKLSENIWWLVELSQRLDIDIQTEMENFLSDKEKQLNIKTRK >gi|311100538|gb|AEKO01000007.1| GENE 731 737951 - 739897 2759 648 aa, chain + ## HITS:1 COG:SP1631 KEGG:ns NR:ns ## COG: SP1631 COG0441 # Protein_GI_number: 15901467 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 644 1 644 647 1208 92.0 0 MINITFPDGAVREFESGVTTFEIAQSISNSLAKKALAGKFNGKLIDTTRTITEDGSIEIV TPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIEDGFYYDTDNEAGQISNEDLPR IEEEMKKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDL CRGPHVPSTGRIQVFHLLNVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKAYLKRLEEAKE RDHRKLGKELDLFMISQEVGQGLPFWLPNGATIRRELERYIVDKEVAAGYQHVYTPPIAS VELYKTSGHWDHYREDMFPPMDMGDGEEFVLRPMNCPHHIEVYKHHVHSYRELPIRIAEI GMMHRYEKSGALTGLQRVREMSLNDGHTFVAPEQIEDEFKKILQLIIDVYEDFNLTDYRF RLSYRDPADKHKYFDNDEMWENAQRMLKAAVDDMGVEYYEAEGEAAFYGPKLDIQVKTAL GKEETLSTIQLDFLLPERFDLHYIGADGEEHRPVMIHRGVISTMERFTAILIENYKGAFP TWLAPHQVTLIPVSNEKHVDYAWEVAKELRDRGVRAEVDERNEKMQFKIRASQTQKIPYQ LIVGDKEMEDGTVNVRRYGQKQTHTETVSEFVENILADIARKSRPDAE >gi|311100538|gb|AEKO01000007.1| GENE 732 739979 - 740185 105 68 aa, chain + ## HITS:1 COG:no KEGG:STER_0614 NR:ns ## KEGG: STER_0614 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 10 47 21 58 121 65 76.0 6e-10 MGLVLFLLLASFTYHRLGLQREKASLSPLGRMVAVNEHKMSVFVRGQERPLPFYILKTCM MGFLSSIR >gi|311100538|gb|AEKO01000007.1| GENE 733 740323 - 740640 97 105 aa, chain + ## HITS:1 COG:no KEGG:str0573 NR:ns ## KEGG: str0573 # Name: not_defined # Def: putative hydrolase # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 102 138 239 313 148 72.0 6e-35 MASLETLLWQEKYPSEIQAVIVLDWALPESYYQIKMHPQMLSMARWESQLGLLRYLPSRL YMPNENLSSSDRRLYQRIAYRQILSQAMLMRVYLLREMLKRLILR >gi|311100538|gb|AEKO01000007.1| GENE 734 740978 - 741937 743 319 aa, chain + ## HITS:1 COG:no KEGG:stu0574 NR:ns ## KEGG: stu0574 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 255 34 288 288 461 87.0 1e-128 MPEDLSGEIEETQRLLSYFDPDLAPHDAFWKDVARLVDLAFPGDILSQEGLVERQIHQLR YLISSQQAQYVRTHYKKTGMTDKEALAVYLRWKPFTMFDQGRLHQKISFCDGKGIYPDGI PSVNLKILLYNRVEFILDSQGNFLNEVDAEQVTESGVVNGASFNYGNFKRHWQLDVEPVQ PHDPDFRNRMTKGFRSPNKLRKKLGRKEPEQFDKSFYNPKGIYAQSHRSLANDVKRQVRL FLAMVYGFKPVQKKQTKEVHMSKQPQNNKGTAVLGSLVFMALYALGIWHNAVRGNIPFLI LWSVLLLVNISYLIFRLKK >gi|311100538|gb|AEKO01000007.1| GENE 735 742039 - 742200 180 53 aa, chain - ## HITS:1 COG:CAC2659 KEGG:ns NR:ns ## COG: CAC2659 COG1983 # Protein_GI_number: 15895917 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Clostridium acetobutylicum # 1 53 1 53 63 61 54.0 5e-10 MKKELRRDPNNKIIAGVCSGIAKYLDIDPVIIRLIWAAAIFLFGTGFLFYIIC >gi|311100538|gb|AEKO01000007.1| GENE 736 742259 - 742936 788 225 aa, chain - ## HITS:1 COG:SP1466 KEGG:ns NR:ns ## COG: SP1466 COG1272 # Protein_GI_number: 15901316 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Streptococcus pneumoniae TIGR4 # 12 223 4 215 215 269 72.0 2e-72 MSNTATFNTSPNLKLSKKLSFGEEVANSVTHAVGAMAMLVLLPITAVHANNGYGMTAAVG MAVFVISLFLMFLSSAIYHAMDYNSPHKMVLRIIDHSMIYIAIAGSYTPVALSLVGGWLG YSIIVLQWGTTIFGILYKIFAKKINEKFSLFLYLMMGWLVIFIIPAIVTKTGPDFWGLML AGGLSYTVGAAFYAKKKPYFHMIWHLFIMLASALQYLGIVYFMIP >gi|311100538|gb|AEKO01000007.1| GENE 737 742929 - 743378 377 149 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1261 NR:ns ## KEGG: GALLO_1261 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 3 145 2 142 147 174 65.0 6e-43 MTTQQYPLWEELPEIELYLDQVLLYVNQVTQSTLGPNDKGLTASMVNNYVKHGHIAKPIK KKYNAAQVARLIVITSLKTVFEISEIAKTLEILRTDAESQKSYYNNFVACMNGQFPQEAP QVILSACQTLQCYRATHQLLNNLEGGNNV >gi|311100538|gb|AEKO01000007.1| GENE 738 743552 - 744823 1455 423 aa, chain - ## HITS:1 COG:SP1726 KEGG:ns NR:ns ## COG: SP1726 COG1257 # Protein_GI_number: 15901559 # Func_class: I Lipid transport and metabolism # Function: Hydroxymethylglutaryl-CoA reductase # Organism: Streptococcus pneumoniae TIGR4 # 3 422 2 424 424 521 64.0 1e-148 MTKLSWTGFSKKTPQERKEHLKKNALLSQKNQDLLDKDQQLTLETANQMAENVIGRFTLP FAVCPDVLVDGVTYQVPMVTEEPSVVAAASYASKLIKRSGGFTTTIHNRQMIGQVALFDV PDKAAASSKIQAASQDLIEIAKEAHPSIVKRGGGPRRLWTEVKGDFLIVYLAVDTQEAMG ANMVNTMMEALVPELENLSEGQSLMAILSNLATESLVTATCRLNTRFLSRNKDEAHDLAK KMEMASQLAQVDPYRAATHNKGIFNGIDALVIATGNDWRAVEAGSHAYASKDGSYRGLST WTYDQEAKELVGELTLPMPIATRGGSIGLNPSASIAHDLLNYPDAKTLASIIVSLGLAQN LAALKALTSTGIQAGHMKLQAKSLALLAGASPEEMPHVLTELLKAKHMNQETTQAILKKL RTP >gi|311100538|gb|AEKO01000007.1| GENE 739 744816 - 745991 1274 391 aa, chain - ## HITS:1 COG:SPy0881 KEGG:ns NR:ns ## COG: SPy0881 COG3425 # Protein_GI_number: 15674906 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxy-3-methylglutaryl CoA synthase # Organism: Streptococcus pyogenes M1 GAS # 1 391 1 391 391 504 67.0 1e-143 MSIGIDKIGFATSQYVLNMADLALARGAEPEKFSKGLMLDATSITPITEDIVTLASDAAA DILNDDDKKAIDMVIVATESSIDQSKAAAVYVHSLLGIQPFARSFEMKEACYAATAGLNY AKLHVATHPDSKVLVIASDIARYGVGSSGESTQGAGAVAMLVSQNPRILELADDNVAQTR DVMDFWRPNYSSTPYVQGIYSTKQYLDSLKTTWAAYQERHQADFADFSAFCLHLPYPKLA LKGLNKIIPKDLNAENKERLINNFDASITYSRQIGNIYTGSLYLGLLSLLEQSQDLKAGD KIGFFSYGSGAVSEIFSGRLVEGYKDMLRSDRLDTFAQRHNLSVADYEKLFYEEAQLDDT GSTRFATYQTGSFRLTEISEHQRIYKGNQND >gi|311100538|gb|AEKO01000007.1| GENE 740 746314 - 747174 942 286 aa, chain + ## HITS:1 COG:SP0669 KEGG:ns NR:ns ## COG: SP0669 COG0207 # Protein_GI_number: 15900570 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 279 279 511 86.0 1e-145 MTKADTIFKENITKILEEGVWSEQARPKYKDGTTANSKYITGAFAEYDLSRGEFPITTLR PIAIKSAIKEVFWIYQDQTNSLDVLEDKYNVHYWNDWEVEDVPANNGDKRSIGQRYGAVV KKHDIINRLLAQLEANPWNRRNVISLWDYEAFEETAGLQPCAFQTMFDVRRVGEDIYLDA TLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLK RQPSDCQPRLILNVPDGTNFFDIKPEDFELVDYDPVKPQLKFDLAI >gi|311100538|gb|AEKO01000007.1| GENE 741 747338 - 747775 513 145 aa, chain + ## HITS:1 COG:SP1571 KEGG:ns NR:ns ## COG: SP1571 COG0262 # Protein_GI_number: 15901414 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 143 23 167 168 167 56.0 8e-42 MPWHLPAELAHFKKTTMGSAILMGRVTFDGMNRRCLPGRETLILTRDKDFDCEGVTTVTS VEEALAWFEQQDKDLYIAGGAGVYKAFEGYYDALIKTTVEADLEGDTYFPQLDMTAFKEV SCDRVAKDDKNAYDFSISRYEKEGD >gi|311100538|gb|AEKO01000007.1| GENE 742 747780 - 747950 177 56 aa, chain + ## HITS:1 COG:no KEGG:str0580 NR:ns ## KEGG: str0580 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 56 1 56 56 82 100.0 4e-15 MQRSVFGLFTALLGVLCVLSAIPAFRKKRYGLAVFLFLNAFTNLVNTIHAFYGTLF >gi|311100538|gb|AEKO01000007.1| GENE 743 747968 - 749194 271 408 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 162 397 255 448 466 108 33 4e-22 MAGNRNEEMVYCSFCGKNQEEVKKIIAGNGVFICNECVALSQEIIREEMAEEVLADLAET PKPKELLDILNNYVVGQDRAKRALSVAVYNHYKRINFTESREENDVDLQKSNILMIGPTG SGKTFLAQTLARSLNVPFAIADATSLTEAGYVGEDVENILLKLIQAADFNIERAERGIIY VDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTKN ILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNKAIDDDSSYMQEIVAEDIQKFGLIPEFIG RLPVLAALEQLTVDDLVRILTEPRNALVRQYQTLLSYDGVELEFDQDALEAIASKAIERK TGARGLRSIIEEVMMDVMFEIPSQEDVTKVRITKEAVDGTAAPVLETA >gi|311100538|gb|AEKO01000007.1| GENE 744 749204 - 749803 659 199 aa, chain + ## HITS:1 COG:SPy0886 KEGG:ns NR:ns ## COG: SPy0886 COG0218 # Protein_GI_number: 15674911 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Streptococcus pyogenes M1 GAS # 1 199 1 199 199 347 84.0 9e-96 MAEEQVLNTHNAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSG KPGKTQLLNFYNIDDKLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVD LRHEPTQDDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKKKLNFDKNDHFIVF SSVTRDGYDEAWDTILAEL >gi|311100538|gb|AEKO01000007.1| GENE 745 749932 - 751308 1593 458 aa, chain + ## HITS:1 COG:BS_ybgF KEGG:ns NR:ns ## COG: BS_ybgF COG0833 # Protein_GI_number: 16077309 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 1 457 1 459 470 506 60.0 1e-143 MENHNYENEGQFQRKMTSRHLFMLSLGGVIGTGLFLSSGYTIAQAGPLGAILSYLVGAVV VYLVMLSLGELAVAMPVTGSFHTYATKFISPGTGFTVAWLYWICWTVALGTEFLGAAMLM QRWFPSVPAWMFAAFFAFVIFGINALSVRSFAEAESFFSSIKVIAIIVFIILGLGAMFGL VSFEGHREAIMFKHLTANGLFPNGGLAIVSVMLAVNYAFSGTELIGIAAGETDNPKEAVP RAIKTTIGRLVIFFVLTIVVLASLLPMKEAGVSSAPFVDVFDKMGIPFAADIMNFVILTA ILSAGNSGLYASSRMLWSLANEGMLNKQLVKINKHGVPMIALLISMAGAVLSLFSSIYAA DTVYLALVSIAGFAVVVVWLSIPLAQINFRKQWNLEHSDDELDYKTPFNPILPYITIILL AISVLGIAWDSSQRAGLYFGIPFMIFCYLYHYLRFKKW >gi|311100538|gb|AEKO01000007.1| GENE 746 751320 - 752270 845 316 aa, chain + ## HITS:1 COG:CAC3348 KEGG:ns NR:ns ## COG: CAC3348 COG2040 # Protein_GI_number: 15896591 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Clostridium acetobutylicum # 5 312 6 308 314 258 43.0 1e-68 MATFKDYLENNSPLILHGALGTEMEALGYDISGKLWSAKYLLEKPEIIQEIHETYIAAGA DLITTSSYQATLPGLVEAGLTEKAAEQIIALTVRLAKAARDKVWVVLDETEKAKRPYPLI SGDVGPYAAYLANGSEYSGDYGQITIEELKDFHRPRIQILLDQGVDLLALETIPNRLEAQ ALIELLAEEFPEAEAYISFTVQEPGTISDGTSLDEIAKLVSQSNQILAVGINCSSPLLYN QALAILKNAGKVLITYPNSGEVYDGNSQTWKTKDKDALTLVEHSKDWHAHFGVKILGGCC RTRPNDIKALYQEFRT >gi|311100538|gb|AEKO01000007.1| GENE 747 752383 - 752637 386 84 aa, chain + ## HITS:1 COG:no KEGG:str0585 NR:ns ## KEGG: str0585 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 84 1 84 84 152 98.0 3e-36 MTYEQEFLKDFEAWVVTQVKVNETALAASKKIWEEDGDERARDASFRYEAKLDAYNFLIG KFTNYRAGKGFHDMPDGLFGERHY >gi|311100538|gb|AEKO01000007.1| GENE 748 752712 - 753062 478 116 aa, chain + ## HITS:1 COG:no KEGG:stu0586 NR:ns ## KEGG: stu0586 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 116 1 119 119 131 90.0 9e-30 MAKVKNKKKAFKHRLKKQGLFNNLKAPVPPVAPQPLAETKTVAKEEVAAKDLSLETFAEL PEVEGLRSNLVETLYNEGLTSVEAFATVTEEEVLALKGVGPATVKKLKENGVSFKA >gi|311100538|gb|AEKO01000007.1| GENE 749 753179 - 753820 604 213 aa, chain - ## HITS:1 COG:SPy0908 KEGG:ns NR:ns ## COG: SPy0908 COG0344 # Protein_GI_number: 15674929 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 213 1 213 213 248 66.0 7e-66 MKILLLILIAYLLGSIQTGLWIGKVFFHTNLREHGSGNTGTTNTFRVLGKTAGTITFLVD MLKGTLAVLLPIWLGVTEVSPLIIGFFAIIGHVFPIFAGFKGGKAVATSAGVLLGFAPLY CVFLLLVFVLTLYLTSMISFSSVTAAIVGLITLAVFPAIHFLLDGYDPIFSTVLIIMALV IIFRHTENMGRIRRHQENLVPFGLNLTKQNPKK >gi|311100538|gb|AEKO01000007.1| GENE 750 753958 - 755907 2368 649 aa, chain + ## HITS:1 COG:SPy0909 KEGG:ns NR:ns ## COG: SPy0909 COG0187 # Protein_GI_number: 15674930 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Streptococcus pyogenes M1 GAS # 1 649 2 650 650 1124 88.0 0 MAKKEINVNNYNDDAIQVLEGLDAVRKRPGMYIGSTDGTGLHHLVWEIVDNAVDEALSGF GDVIAVTLNNDGSVSVSDSGRGMPTGMHAMGKPTVEVIFTVLHAGGKFGQGGYKTSGGLH GVGSSVVNALSSWLEVEITRDGNVYRQRFENGGHPVTGLEKIGKAPKSKTGTKVTFMPDA SIFSTTDFKFNTISERLKESAFLLKNVTMTLTDLRGEEEVREEFHYENGVQDFVSYLNED KETLTPVIYIDGDQQEFHLEVALQYNDGYSDNILSFVNNVRTKDGGTHETGFKSAITKAL NDYARKTGLLKEKDKNLEGSDYREGLSAVISLLVPEEHLQFEGQTKDKLGSPLARPIVDS IVSEHLTYFLMENGDLASNLVRKAIKARDAREAARKARDASRNGKKNKKDKGLLSGKLTP AQSKNAKKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKMADILKNEEINT MIYTIGAGVGADFNLDDINYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIA LPPLYKMSKGKGKKEVVEYAWTDGELEELRQKFGRGAILQRYKGLGEMNADQLWETTMDP ETRTLIRVTIDDLARAERRVSVLMGDKPAPRRQWIEDNVKFTLEETTAF >gi|311100538|gb|AEKO01000007.1| GENE 751 755904 - 756107 116 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRKLASKKLSGSPILDSITLSMHRRNTIGVYNTKSLIHRRFMMITRKIEDKKTNKGKPKY RSITHTP >gi|311100538|gb|AEKO01000007.1| GENE 752 756426 - 758846 3085 806 aa, chain + ## HITS:1 COG:SPy0910 KEGG:ns NR:ns ## COG: SPy0910 COG0188 # Protein_GI_number: 15674931 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pyogenes M1 GAS # 1 802 13 817 819 1248 78.0 0 MGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNKDGNTHDKGYRKSAKSVGNIMGN FHPHGDSSIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQ DIDKNTVPWAWNFDDTEKEPTVLPAAFPNLLVNGATGISAGYATDIPPHNLSEVIDAVVY MIDHPSAKLDKLMEFLPGPDFPTGAIIQGKDEIRKAYETGKGRVVVRSRTEIEQLKGGKE QIIVTEIPYDVNKAVLVKKIDDVRVNNKVPGIAEVRDESDRTGLRIAIELKKDADSQTIL NYLLKYTDLQVNYNFNMVAIDNFTPRQVGLQKILSSYIAHRRDIIVARSKFDKEKAEKRL HIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDI VTLQNEEADLREQIATLAAIIGDERTMFNVMKRELRDIKKKFGNDRRSELQAETKTIEID TASLIVEEETYVSITRGGYVKRTSPRSFNASTIDEVGKRDDDDLILVQQAKTTQHLLIFT NQANVIYRPIHELPDIRWKDLGEHLSQTITNLSKDEEVLYAEILDDFETGTYLAATKLGQ IKRFERKEFTPWRTYKSKSVKYAKLKDNSDFIVTVTPIQLDDIMIITQKGYALRFNADEV PVVGAKAAGVKAINLKDDDTVQAVFVANTQSFYLLTQRASLKRVATADIPQAKRAGRGLQ VLRELKTKPHSVFTAGPVFTENAGGEIDLLATPVEETPQTLLVTATTGETEEVDLSLLNL SDRTSNGSFIEGLADKEVFSAKIIEK >gi|311100538|gb|AEKO01000007.1| GENE 753 759012 - 760034 1299 340 aa, chain + ## HITS:1 COG:SP0856 KEGG:ns NR:ns ## COG: SP0856 COG0115 # Protein_GI_number: 15900741 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 340 1 340 340 617 85.0 1e-177 MTVDLDWKNLGFNYRKLPFRYISYYKDGKWDDGQLTEDATLHISEASPALHYGQEAFEGL KAYRTKDGSIQLFRPDENAKRLQRTADRLLMPQVPVDKFVDACKQVVRANEEYVPPYGTG ATLYLRPLLIGVGDIIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDEYDRAAPHGT GAAKVGGNYAASMLPGKIAHDSNFSDVIYLDPATHTKIEEVGSANFFGITADNEFITPLS PSILPSITKFSLLYLAENRFGMKAIQGDVKIAELDKFVEAGACGTAAVISPIGGVQHGDD FHVFYSETEVGPVTRKLYDELTGIQFGDVEAPEGWIVKVD >gi|311100538|gb|AEKO01000007.1| GENE 754 760153 - 760383 321 76 aa, chain + ## HITS:1 COG:no KEGG:str0591 NR:ns ## KEGG: str0591 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 76 1 76 76 103 93.0 2e-21 MSKKDKKIEIQIKDAKVIVNKAIIEGFELLVGKKVIGQIVEIDEKFAVVDKENVAGFHNK MDDAIAAIIESYNLNH >gi|311100538|gb|AEKO01000007.1| GENE 755 760734 - 761987 2034 417 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55736656|gb|AAV60298.1| 30S ribosomal protein S1 [Streptococcus thermophilus LMG 18311] # 1 417 1 417 417 788 98 0.0 MLSRVRIGWLLLEDLFRMNEFEELLNSVSEVNTGDVVTAEVISVDNDQANVVIEGTGIEG VLTRRELTNDRDANVADLVKVGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLV GREEEVVTVKGTRAVKGGLSVEFEGLRGFIPASMIDTRFVRNTEQFVGQEFDAKIKEVDP AENRFILSRREVVEAEAAEARKEVFSKLEVGSIVTGKVARLTSFGAFIDLGGVDGLVHVT ELSHERNVSPKSVVSVGDEVEVKVLAIDEEAGRVSLSLKATTPGPWDGVEQKLAAGDVIE GKVKRLTDFGAFVEVLPGIDGLVHISQISHKRVENPKDVLSVGQDVTVKVLEVNADAERV SLSIKALEERPANAEGENNEKRQSRPRRPKRQEKRDYELPETQSGFSMADLFGDIEL >gi|311100538|gb|AEKO01000007.1| GENE 756 762815 - 763435 538 206 aa, chain + ## HITS:1 COG:no KEGG:SUB1007 NR:ns ## KEGG: SUB1007 # Name: not_defined # Def: lipoprotein # Organism: S.uberis # Pathway: not_defined # 1 205 1 207 207 134 43.0 2e-30 MKKLLSLTVLGLSLFSLAACGNSSSKTETKGSLDNEVSKILTVKHGNVRQNFDKITMANA SQEFSGGSNLDSLKGLFGEPTSTSQEQAGDATLDVYNWQYDNVVVTAKLFNNSTVVKSIS TFSYVRDSKITLKMYEDLKNGTSYDNVVKTLGVPDVYSIAVSSDATMTQALWSSNLVTKK GKTGSLTLNFKNGALENKSQENLINK >gi|311100538|gb|AEKO01000007.1| GENE 757 763698 - 764189 342 163 aa, chain + ## HITS:1 COG:no KEGG:str0595 NR:ns ## KEGG: str0595 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 163 18 180 180 217 81.0 1e-55 MILSSAIPGVSSSIFCIFVGLLYVPLLVIPMNIIGNTFGNLTSFEILRRLERSKRMEKLL NYVESFKHRFIGISLAFSTPFIPSALVNYACVQMKLPTRTRILATLIGVAPLSVVYAVSG DLLLNIRPIRIPLASVLDLLLFILLVIYFIHFRKEKNELHSSN >gi|311100538|gb|AEKO01000007.1| GENE 758 764167 - 765402 1457 411 aa, chain + ## HITS:1 COG:SP0616 KEGG:ns NR:ns ## COG: SP0616 COG2348 # Protein_GI_number: 15900524 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 1 410 1 410 410 543 67.0 1e-154 MSFIQVTKEEFNTHAQQVSERSFMQTEEMARLLEKRGFSISYVAWKEGDQLEVSAIVYSM PMTGGLRMEVNCGPIHSNAAHLSDFYQGLKDYAKENGALELLIKPYDTYQTFDSNGDPTS DEQKQLISQLTDLGYSFDGLQTGYPGGEPDWHYVKDLSGIAEKDLIKSFSKKGKPLVKKA KTFGIKLKKLKRDELSIFKEITSATSDRREYSDKTLDYYQNFYDAFGDNADFMVATLNFQ DYFDHLESDQAKLGARIVKLQADLEANPKSEKKQNQLRELSSQFATFDVRKGEATAFIDK YGQEDIVLAGSLFVYTPQEAVYLFSGSYPEFNKFYAPALLQEYVMTQAIKRGVSFYNFLG IMGIFDGSDGVLRFKQNFNGYIVRKMGTFRYYPQPLKYKAIQGVKKLLGRH >gi|311100538|gb|AEKO01000007.1| GENE 759 765502 - 766464 950 320 aa, chain + ## HITS:1 COG:SPy0441 KEGG:ns NR:ns ## COG: SPy0441 COG0673 # Protein_GI_number: 15674565 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 316 1 316 319 426 64.0 1e-119 MKLALLGTGMIVTEVLPVLTTIEGIELEAIMSTPRSLDKAEALAKQYGLTQATSDYAAIL SNPDVDTIYIGTPNHTHYDYAKQALLAGKHVICEKPFTLHLEEFEELIKLAQEKELLLIE AITNQYLENFKVIKDSLSEIGDIKIVNINYSQYSSRYDAFKRGEIAPAFNPKMGGGALRD LNIYNIHLLVGLFGKPNRVEYLPNVERGVDTSGILVLDYGNFKAVAIGAKDCSAEIRSTI QGDKGAITIFGATNTLPEIGLTLNGQEETVINLNSPKHRMYDEFVSFEKMVATKDFDSVA KQLEHSHQVMEVLDQASKVL >gi|311100538|gb|AEKO01000007.1| GENE 760 766504 - 766806 434 100 aa, chain - ## HITS:1 COG:no KEGG:str0600 NR:ns ## KEGG: str0600 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 100 1 100 100 166 98.0 2e-40 MKLINTTRTHQELVQNQLDNTDAFLVETYSAGNTDVVFTQAPKHYELLISNKHRAVKDNE LEVIREFFLKRKIDKDIVLMDKLRTVHTDKLIEISFPTTV >gi|311100538|gb|AEKO01000007.1| GENE 761 766803 - 767267 616 154 aa, chain - ## HITS:1 COG:SPy1510 KEGG:ns NR:ns ## COG: SPy1510 COG0494 # Protein_GI_number: 15675412 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 143 2 144 151 211 72.0 4e-55 MNPTFGDKVEGAHYQTRYGVYAVIPNQEKTKIILVQAPNGAWFLPGGEIEAGEDHYSALE RELIEELGFTATLGQYYGQADEYFYSSHRDTYYYNPAYIYEVVDFSKIGKPLEDFNNLAW FPIDEAIAKLKRGSHKWGIEQWKANNLANLRRKL >gi|311100538|gb|AEKO01000007.1| GENE 762 767410 - 769680 1651 756 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 83 728 143 800 815 640 51 0.0 MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPKNPLNQFNQTGGSNFFDDFF SDLNNFRSSNGDLPNTPPTQEGGNRGNGGNTQGPGRPEGPRQQATQQPQGLLEEFGINIT NIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVGKTAVVEGLAQKIVDGNVP QKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITIL RGIQPKYQDYHHVKYTDEAITAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFIDP KNIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQKQTIKDQDMPVITEKHIEAI VEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEA GQLTEKVRRNPYSLILLDEVEKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSN AGTGKVEASVGFGATRENRTNSVLNQLGDFFSPEFMNRFDGIIEFSALSKENLLTIVDLM LDNVNQRLANNGIHLSVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN EKDLKAVMTSKGHITIKSAKKVEKNTQKAEAAKESD >gi|311100538|gb|AEKO01000007.1| GENE 763 769922 - 770902 1072 326 aa, chain + ## HITS:1 COG:SPy1544 KEGG:ns NR:ns ## COG: SPy1544 COG0078 # Protein_GI_number: 15675442 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Streptococcus pyogenes M1 GAS # 3 326 6 332 337 409 62.0 1e-114 MTQTKSFLREIDFTKQELEELIDLSIKFKQLKKDRIPHKYLDGLNIALIFEKTSTRTRSA FTVAGQDLGMNVTYLGAGDIQLGKKESVVDTAKVLGSMFDGIEYRGFKQEDVEDLAKYSG VPVWNGLTDTWHPTQMIADFMTLKERFGSLEDLTIAYIGDGRNNMANSLLVTSAILGVNV KIIAPEVLQPEDEIVALAQKHNNGADLTITDDISEVKGVDMLYTDVWVSMGEEVDFKSRI DLLLPYQINADLLAKTENPDVTVMHCLPAFHDLNTQIGKEIYDKYGLAELEITDQVFQKY SDIIFQEAENRMHSIKAIMYNSLKNI >gi|311100538|gb|AEKO01000007.1| GENE 764 770971 - 771201 329 76 aa, chain + ## HITS:1 COG:SPy1508 KEGG:ns NR:ns ## COG: SPy1508 COG4703 # Protein_GI_number: 15675410 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 76 1 76 76 132 93.0 1e-31 MESHLVRIINRLEMMAADGGNLKRNFEREGVVVAEVSFSNDPENGPVFTLRDVEARESYS FDSIDLIAMEIYDLLY >gi|311100538|gb|AEKO01000007.1| GENE 765 771469 - 772149 845 226 aa, chain + ## HITS:1 COG:SP0823 KEGG:ns NR:ns ## COG: SP0823 COG0765 # Protein_GI_number: 15900711 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 226 3 228 229 315 70.0 6e-86 MNFSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSLAKRSGIKPLEWLVSLYVWVF RGTPMVVQIMIAFNLIHMNLPTVQFGILNLDLSRIVPGIIVLSLNSGAYISESVRAGIES IPKGQVEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMELWN GAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGEGRK >gi|311100538|gb|AEKO01000007.1| GENE 766 772149 - 772883 658 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 243 1 242 245 258 51 5e-67 MAETIIEIKNLHKYFGKNEVLKGIDLDIKKGEVVVIIGPSGSGKSTFLRSMNLLETPTKG VISFEGVDITDKSNDIFKMREKMGMVFQQFNLFPNMTVKENITLSPIKTKGVSKADAEAK AMELLEKVGLKDKADAYPTSLSGGQQQRIAIARGLAMDPDVLLFDEPTSALDPEMVGEVL AVMQDLAKSGMTMAIVTHEMGFAYEVADRVIFMDGGVIVEEGTPQEIFDNTKEDRTKDFL SKVL >gi|311100538|gb|AEKO01000007.1| GENE 767 773056 - 773532 458 158 aa, chain + ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 12 151 16 150 152 95 39.0 3e-20 MLIYDAALKTPYRILGINLPKDSLLHLSNLGLAAGETIEVVTKTKNSAIIIVKGSRLAFD ASILDKIDLAPAEEDQEKIPLSELPVGRSAIVTDIFSANETKRRLMDMGITKRTRVLLRK VAPLGDPLEISLRGYELTLRKSEAQMISVVMLEEGEEK >gi|311100538|gb|AEKO01000007.1| GENE 768 773529 - 775667 1940 712 aa, chain + ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 1 693 1 700 709 794 56.0 0 MTEIALIGNPNSGKTSLFNLITGNNQRVGNWPGVTVERKSGLVKKNKDLEIQDLPGIYSM SPYSPEEKVARDYLLSQRADSILNVVDATNLERNLYLTTQLIETGIPVTLALNMSDVLEA QGKQINVEKLSYHLGVPVVATSALKQTGVDQVVKKASHTTTSTVGDIAFPIYDDKLEAAI SQILEVLGNSVPQRSARFYAIKLFEHDALVEADLDLSPFQRKEIKDIIRITEEIFTEDAE SIVINERYAFIERVCQMAQSYTEDFDLTLSDKIDRIVTNRILALPIFAAVMYLVYFLSIQ TVGTMWTDWANDVLFGKYVPDLVTSGLDYLQVQDWLKSLIVDGIVAGIGTVLGFLPQIFV LFICLGVLEDIGYMSRIAFVMDRIFRRFGLSGKSFIPMLISTGCGVPAVMSSRTIENERD RRITIMTATFMPCSAKLEIIALIAGAFFPSNSFVAPSTYFIGVAAIILSGIALKKTSFLG GLTSPFIMELPAYHWPKAISVLRYAFGKAMSFVKRAGTIIFSLTVLIWFMSNYNFMLQTV DTEMSILATLGKGLSWIFAPLGFGNWKSTVAALTGLAAKETVVATFGILYHNSSEAGLAT ALQADYSSLAAYSFLIFNLLCAPCFAAIGAIKREMASLKWTVGAIGFQTGLAYCVSLILY QFGQVILYGKSMTIWTFVAFLLLVTMIYFVVRKPRQIKDQIISLDNLQEAHI >gi|311100538|gb|AEKO01000007.1| GENE 769 775685 - 775825 62 46 aa, chain + ## HITS:1 COG:no KEGG:STER_0655 NR:ns ## KEGG: STER_0655 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 46 1 46 46 84 95.0 2e-15 MSTFIIAFIIFALAGLGIRHYIKGKGSCGDCECSCPVKEEMHKANH >gi|311100538|gb|AEKO01000007.1| GENE 770 775973 - 776188 219 71 aa, chain + ## HITS:1 COG:no KEGG:str0609 NR:ns ## KEGG: str0609 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 30 71 1 42 74 89 95.0 3e-17 MGLNRESALIHETWCTDNIWGEFAIGLRQMEYTVHTPSFRYRDLPYQDCLTKVGTVTLQD YRDDLVALIES >gi|311100538|gb|AEKO01000007.1| GENE 771 776878 - 777732 982 284 aa, chain + ## HITS:1 COG:SPy1502 KEGG:ns NR:ns ## COG: SPy1502 COG0190 # Protein_GI_number: 15675405 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 282 1 282 284 414 73.0 1e-115 MAIIMDGKALAVKMQDQLQEKVARLKEKEWIVPGLVVIMVGDNPASQVYVRNKERAAKKA GFHSKTVNLSESISEEELIEVIEKYNQDPLFHGILVQLPLPNHINEMRILLAIDPKKDVD GFHPMNTGNLWNGRPQMVPCTPAGIMEILREYNVELEGKTAVIIGRSNIVGKPMAQLLLE KNATVTLTHSRTPHLAKVCNKADVLIVAIGRAKFVTEEFVKEGAVVIDVGINRDEEGKLC GDVDFDQVKEKVGMITPVPGGVGPMTITMLMEQTYQAALRSSKG >gi|311100538|gb|AEKO01000007.1| GENE 772 777736 - 778221 335 161 aa, chain + ## HITS:1 COG:SA0007 KEGG:ns NR:ns ## COG: SA0007 COG0063 # Protein_GI_number: 15925712 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Staphylococcus aureus N315 # 12 138 15 141 276 118 46.0 4e-27 MKVDDDLVRQVIRPRLRESHKGSYGRVLLVGGLYPYGGAIILAAIACVNSGAGLVTVATD RDNITALHAHLPEAMAFDLRETERFLDNLRAADVVLIGSGLGEEETAGRALDLVLANIRS NQNLVVDGSALNLLAHKKRAVCQSVTLYLLPIKRNGKDCLD >gi|311100538|gb|AEKO01000007.1| GENE 773 778146 - 778571 165 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 [Marinobacter sp. ELB17] # 1 134 361 496 503 68 36 2e-26 KKSSLPECHLILTPHQKEWERLSGLAISEQSVSNTQRALEEFQSGTILVAKSHKTAVYQE AEVAHLEVGGPYQATGGMGDTLAGMVTGFLAQFASTDSYKAVIIATWLHSAIADNIAENA YVVLPTRISKAIPRWMKKLSL >gi|311100538|gb|AEKO01000007.1| GENE 774 778693 - 780807 2307 704 aa, chain + ## HITS:1 COG:SP1673 KEGG:ns NR:ns ## COG: SP1673 COG0768 # Protein_GI_number: 15901508 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Streptococcus pneumoniae TIGR4 # 32 704 8 677 680 612 48.0 1e-175 MTSFWEKNSQKWKIWRQKRKEKRANKSRKPVNISRRVYLLFGVVFVLFLLLFARLTYMQV YNKSFYTKKLEDNSKYTVRIASERGQIFDAKGVALTTNQSKDVITFTRSNLVSSDTMKKV AEKLATMVTLTETKVTARQKRDFYLADSATYKRVVNDLPKDKKTDKFGNKLAEATIYNNA VDAVPDEAVDYTEDELKIVYIYSQMNAVSNFSTVTLKTADLTPDQIAIVAAKQKELNGVT VAKDWERHTSDSALSPLIGRVSSSEAGLPQEDAKDYLKKGYALNDRVGTSYLEKEYEEKL QGKHTVREITVDKEGKVDSDKITQKGSKGNNLQLTIDLDFQKGVEDILGQQLSSEISENK ATYSEGMYAVVMNADTGAVLAMAGQKHEQGAQDFKADALGTITDVFIPGSVVKGATLTAG WRSGAIYGDQVLTDQPINIAGSPSITSWFTEKGSRAITATQALEYSSNTYMVQIAIKLLG QQYVPGMSLSTDNMEKAMTTLRDTYAEFGMGVSTGLDLPGESEGYISKNYNVANVLTEAF GQYDSYTTIQLAQYVASIANGGKRVAPHIVGGIYDAGENGSLGTLSSTVDTRVLNNLSLD SEQLGIIQQGFNDVVNSGSSLATGKAMASSIIPISGKTGTAETYATDGSGNSVTTVNLNA VAYATAKDGTKLAVGIMYPHALDWKSKAHQNAVKAIMELYQNTH >gi|311100538|gb|AEKO01000007.1| GENE 775 780736 - 780918 61 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKASISFIFLNSYLKEQILKHYITEKSLMQGTRDFILLVSILIKFHDSFNGILMGLTLPV >gi|311100538|gb|AEKO01000007.1| GENE 776 780917 - 781513 663 198 aa, chain + ## HITS:1 COG:SPy1422 KEGG:ns NR:ns ## COG: SPy1422 COG0353 # Protein_GI_number: 15675339 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Streptococcus pyogenes M1 GAS # 1 198 1 198 198 347 89.0 6e-96 MLYPTPIAKLIDSFSKLPGIGAKTATRLAFYTINMSDEDVNDFAKNLLAAKRELTYCSVC GRLTDDDPCNICMDETRDRTKILVVEDSKDVSAMEKIQEYRGLYHVLQGLISPMNGVGPD DINLKSLITRLMDSEVDEVIIATNATADGEATSMYISRVLKPAGIKVTRLARGLAVGSDI EYADEVTLLRAIENRTEL >gi|311100538|gb|AEKO01000007.1| GENE 777 781616 - 782452 718 278 aa, chain + ## HITS:1 COG:lin2530 KEGG:ns NR:ns ## COG: lin2530 COG3711 # Protein_GI_number: 16801592 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 1 272 1 273 285 210 41.0 3e-54 MQIEKILNNNVVQAMDNDVEYIVMGKGLGFQKKVGETVDKEKVEKTFVLENPEIEAEWTR AYVDLPDGEMQVFLNIITFAEDVLQTKFEPSFFIALADHLHYAIERSREGISLQNSLAWE VRKFYPREYEIGKEALRLIADDLEVELADDEAASVALHFVNAQKDVGLHEKDQQMTQIVV GISEIVRLDFACDLEQDSFSYNRFITHLRYLAQRIVSGVSGGKNDAFLYEQVKVNYPKSF ICTQKVVTYIKSSYAFELSLDEQVYLTIHIQRFRDHID >gi|311100538|gb|AEKO01000007.1| GENE 778 782784 - 783170 438 128 aa, chain + ## HITS:1 COG:SP0967 KEGG:ns NR:ns ## COG: SP0967 COG0319 # Protein_GI_number: 15900844 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Streptococcus pneumoniae TIGR4 # 1 128 38 165 165 199 92.0 9e-52 MAVTFVTNERSHELNLEYRDTDRPTDVISLEYKPELDITFDEEDLAENPELAEMMGEFDS YIGELFISIDKAREQAEEYGHSYEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEIL TAYGLTRQ >gi|311100538|gb|AEKO01000007.1| GENE 779 783151 - 783555 393 134 aa, chain + ## HITS:1 COG:SPy0475 KEGG:ns NR:ns ## COG: SPy0475 COG0818 # Protein_GI_number: 15674591 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Streptococcus pyogenes M1 GAS # 1 131 1 132 135 176 73.0 8e-45 MDLRDNNPQKKWKNREFTASFEFALTGIITAIKEERNMRKHLVSAILVVLAGLVFRVSAT EWLFLLQAVFLVIALEIVNSAIENVVDLASNYHFSMLAKNAKDMAAGAVLVVSCYALITG MIVFIPKIWNLIFN >gi|311100538|gb|AEKO01000007.1| GENE 780 783574 - 784473 1131 299 aa, chain + ## HITS:1 COG:SP0969 KEGG:ns NR:ns ## COG: SP0969 COG1159 # Protein_GI_number: 15900846 # Func_class: R General function prediction only # Function: GTPase # Organism: Streptococcus pneumoniae TIGR4 # 1 299 1 299 299 541 93.0 1e-154 MTFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTEKEQIVFIDT PGIHKPKTALGDFMVESAYSTLREVDTVLFMVPADEPRGKGDDMIIERLKQAKVPVILVV NKIDKVHPDQLLEQIDDFRKQMDFKEIIPISALQGNNVSHLVDVLSDNLEEGFQYFPSDQ ITDHPERFLVSEMIREKVLQLTREEIPHSVAVVIDSMKRDEETDKVHIRATIMVERDSQK GIVIGKKGAMLKKIGTLARKDIELMLGDKVFLETWVKVKKNWRDKKLDLADFGYNEKEY >gi|311100538|gb|AEKO01000007.1| GENE 781 784520 - 785341 374 273 aa, chain + ## HITS:1 COG:SPy0497 KEGG:ns NR:ns ## COG: SPy0497 COG0266 # Protein_GI_number: 15674603 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Streptococcus pyogenes M1 GAS # 1 273 1 273 275 406 69.0 1e-113 MPELPEVETVRRGLERLVVGRTILSLEVKVPKMIKTSYDSFLHDLPGQMIQVMRRRGKYL IFDFGQLIMISHLRMEGKYLLFTDQVPTNKHFHLFFKLDDGSTLVYQDVRKFGTFDLLDR KQEEVYFIRKKLGPEPTKKTFKYAPFERALMHSAKPIKPLLLEQKLVAGLGNIYVDEVLW AAKVHPETPANKLSKAAMKRVHDQTIAILQLGIEKGGSTIRTYRNALGEDGTMQDYLRVY GKTGQPCPRCASTIEKIRLGGRGTHLCPHCQKR >gi|311100538|gb|AEKO01000007.1| GENE 782 785338 - 785931 420 197 aa, chain + ## HITS:1 COG:SPy0498 KEGG:ns NR:ns ## COG: SPy0498 COG0237 # Protein_GI_number: 15674604 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Streptococcus pyogenes M1 GAS # 1 195 1 195 197 228 61.0 8e-60 MIIGLTGGIASGKSTVVEMIKEVGYKVIDADQLVHDMQAKGGRLYRALHDWLGEDILLSD GELNRPKLGKLIFSSEEMRHQSAEIQGKIIREELAVKRDCLAKEEDVFFMDIPLLIENGY QDWFDQIWLVAVSPEVQRQRLMKRNHLSAEEAGMRIASQMPLAEKLPYASLVIDNNGSID DLKKKVKSAIKDLANLV >gi|311100538|gb|AEKO01000007.1| GENE 783 786087 - 787205 833 372 aa, chain + ## HITS:1 COG:SPy0501 KEGG:ns NR:ns ## COG: SPy0501 COG0477 # Protein_GI_number: 15674606 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 369 28 396 397 443 67.0 1e-124 MALYVEELGIKGAMVEWYAGLSVALSALASALVSPVWGRLADRYGRKPMMIRASMVMTFT MGGLAFVPNVFWMLFLRILNGLFAGYVPNATALIASQAPQQRSGYALGTLSTGLTAGVLI GPLLGGTLSEAFGMRCTFLLVGVILFICCLLTIFGLREDFQPIEKGEMMTLSQVFAKIPS KSLLIGLFVTSMIIQISAQSIAPMLALYIRYLGQRDNILFYSGLIVSAMGFSSLLSTPFL GKLGDRIGNHRLLLMGLFYSFLLYFLCGFAGSALQLGILRFAYGFGIGALMPSVNSLLTK MTPKEGISRIFSFNQSFSYIGQVLGPFVGSAVATGLGYRWVFFVTAMIVFGNFVWSLIIF RKSLGVKNIGES >gi|311100538|gb|AEKO01000007.1| GENE 784 787195 - 787341 243 48 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55820702|ref|YP_139144.1| 50S ribosomal protein L33 [Streptococcus thermophilus LMG 18311] # 1 48 1 48 48 98 93 7e-19 MRVKINLKCSECGSINYLTSKNKQNHPEKIQVLKFCPKDRKVTLHVES >gi|311100538|gb|AEKO01000007.1| GENE 785 787387 - 787623 348 78 aa, chain + ## HITS:1 COG:SPy0502 KEGG:ns NR:ns ## COG: SPy0502 COG1314 # Protein_GI_number: 15674607 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Streptococcus pyogenes M1 GAS # 1 78 1 78 78 97 73.0 6e-21 MYDLLLTLLLVMSAIIVIAVFMQPQKNPSSNVFDGGGSEALFERSKPRGFEAFMQRFTGI MVFLWIVDAIVLSILSSK >gi|311100538|gb|AEKO01000007.1| GENE 786 787686 - 790139 1375 817 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 733 3 730 730 534 39 1e-150 MKESIINYLKEHGKSSVNDIAQALNHAGGEKFPQLIKAISAMESKRQLRFNRDGSVSLRP KKENPNQVTVEGVFRANKNGFGFLHVDDSEDDMFIGRNDVGHAIDGDTVAVVIKKPADRL RGTAAEARVVEIVERSLKTVVGKFILNDEKEPYAGYIKSKNQKIQQPIYIKKEPVALEGN EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVLESMDIVSEFPEDVMAEAEAV PDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNFELGVHIADVSYYVTE GSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEITPKGKVVNH KICQSVIKTTFRMTYSDVNEMLAGNPEKIEQFKPIMDSVSAMAELHKILEDMRERRGALN FDTSEARILVNDKGMPVDIVVRERGTAERMIESFMLAANECVAEHFAKTKLPFIYRIHEE PKAEKLQRFMDYASIFGIQIKGTANKMDQLDLQDFMARVQGKPGAEVMNMMLLRSMQQAR YSEHNHGHYGLAAQYYTHFTSPIRRYPDLLVHRMIREYTNNMSQETREHFEEVIPELATS SSTLERRAIDAERVVEAMKKAEYMEEFVGQEFDGIVGSVVKFGMFVELPNTIEGLVHITT LPEFYNYNERTMTLQGEKTGKTFRVGQPIRVKLTRADKETGDIDFQYLPSEYDVTEKVDH KARQEREEKAKAFRNRGPRRDRQNGDFERRGKRGDNRNRQDDNGRKGSYDEKRKSSKKPD KRKNQNRPHNDNKGRESGRRKKKRNKPFYKDVAKKRK >gi|311100538|gb|AEKO01000007.1| GENE 787 790161 - 790625 529 154 aa, chain + ## HITS:1 COG:SPy0504 KEGG:ns NR:ns ## COG: SPy0504 COG0691 # Protein_GI_number: 15674609 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Streptococcus pyogenes M1 GAS # 1 153 1 153 155 240 81.0 6e-64 MPKGEGNVVAQNKKARHDYSIVDTIEAGIVLTGTEIKSVRAARIQLKDGYAQIKNGEAWL INVHIAPFEQGNIWNQDPDRTRKLLLKKKQITKLQNDLKGTGMTLVPLKVYLKNGFAKVL LGIAKGKHDYDKRESIKRREQERDIKRIIKSVNR >gi|311100538|gb|AEKO01000007.1| GENE 788 790780 - 792186 1596 468 aa, chain + ## HITS:1 COG:SP1538_2 KEGG:ns NR:ns ## COG: SP1538_2 COG0652 # Protein_GI_number: 15901382 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Streptococcus pneumoniae TIGR4 # 271 468 1 198 198 313 79.0 6e-85 MPVDAKTKYKAKKTKIVFFDIDDTLRVKKTGYIPESIKAVFKGVKEKGILTGIATGRGYY GVVEDIRDLEPDYFVTINGTYVINRKGEEIYNQPLAREVTEAFVAWCKEIGIAWGFAGKD KPVVSERSDLIDNAMKPVYGLCDVEPDFHLSNDVYHMWTFAENDGELELPEELAAHVRMV PWHEHSSDVVANDISKASGVEHVLEHENLKPVNAMMFGDGPNDMEIFDYVGLKIAMGNAT PELKEKADYVTGTIEEDGIFNALEELGLVEKELHFPQLDLDTVEGPVATIKTNHGNLVIK LFPDHAPLTVTNFVNLAKSGYYDGVIFHRIIKDFMIQGGDPTGTGMGGESSFGGSFQDEF SEELYNLRGALSMANAGPDTNGSQFFIVQTPEIPYAKKELERGGWPAPIAEAYAENGGTP HLDRRHTVFGQLVDEDSYKVLDEIANVEVGAQDKPLEDVVIETVEVAD >gi|311100538|gb|AEKO01000007.1| GENE 789 792188 - 792466 387 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55820707|ref|YP_139149.1| hypothetical protein stu0628 [Streptococcus thermophilus LMG 18311] # 1 81 1 81 121 153 96 7e-58 MKIGDKLRGVITGIKPYGAFVSLENGTTGLIHISEIKTGYIDNIYNTLKVDQEVLVQVVD FDEFTQKASLSLRTLEEEKIKFLIDIVSLTVV >gi|311100538|gb|AEKO01000007.1| GENE 790 792421 - 792552 237 43 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55820707|ref|YP_139149.1| hypothetical protein stu0628 [Streptococcus thermophilus LMG 18311] # 1 43 79 121 121 95 97 7e-58 KNKIPHRHRFSDSRLNYGFKPLAEAMPGWIEEGLDYLRQEHEG >gi|311100538|gb|AEKO01000007.1| GENE 791 792654 - 793739 1253 361 aa, chain - ## HITS:1 COG:SPy0513 KEGG:ns NR:ns ## COG: SPy0513 COG0006 # Protein_GI_number: 15674617 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Streptococcus pyogenes M1 GAS # 1 360 1 360 361 596 78.0 1e-170 MSKLDRIRHFLNENKSGLAIVSDPVTVNYLTGFDCDPHERQMFLFVYENREPALFVPALE VARASSVLDFPVFGYVDSENPWQKIKAGLASTDSPIIYAEFDNLNVTKFQGLQTVFEGRF ENLTPFIQKMRVIKSADEIQKMIVAGDYADKAVNIGFDNISLDMTETDIIAQIEFGMKKI GINQMSFETMVLTGNNAANPHGIPGTNRIENDSLLLFDLGVVSQGYVSDMTRTVAVGQPD QFKKDIYNICLEAQLTALDFIKPGVTASEVDAAARNVIEKAGYGEYFNHRLGHGLGMDVH EFPSIMEGNDLVIEEGMCFSVEPGIYISEKVGVRIEDCGYVTKDGFEVFTHTPKELLYFD V >gi|311100538|gb|AEKO01000007.1| GENE 792 794054 - 795055 1023 333 aa, chain + ## HITS:1 COG:SPy0514 KEGG:ns NR:ns ## COG: SPy0514 COG1609 # Protein_GI_number: 15674618 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 333 1 333 333 516 82.0 1e-146 MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLA SKKTTTVGVVIPNITNSYFATLAKGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQ VDGIIFMGHHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPSVNIDYKAAVEDCVTKLAKNN EKVAFVSGPLIDDINGKLRLAGYKSGLEKNNLSYNEGLVFEAKYSYKDGFDLAQRVLNSG ATAAYVGEDELAVGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGA VSMRMLTKIMHKEELEDKNVILNHGLTLRQSTK >gi|311100538|gb|AEKO01000007.1| GENE 793 795115 - 796182 909 355 aa, chain + ## HITS:1 COG:SPy1552 KEGG:ns NR:ns ## COG: SPy1552 COG2315 # Protein_GI_number: 15675448 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 355 1 352 359 302 43.0 8e-82 MTFEDAYFKQKVLKHDSLEPFGFITSEKGYELRKTLMVEGLEARLFIDLEGKLTGQVVDI DFDESYDTFRSPHATGTYVGQVREAYGDLLSQVADFCYDDQLFSSPQANRLANFIVKEFS DQADHPFEKYPDYLSFRVDDKWYALFFPLKGEKLGLGGEKADLVYDVVNLKIDPRQMDKL LELDGIYPSYHMSKKTWISLVLDETIPDQTIFELLRGSRSLVAPKHLRKPSEPHYWIIPV NLKYYDIGEEFSASEDILWTQKASMQKGDVVALYITAPTKAIRYLCQVLEANIPNQGYRE EESIKELMRIKPLYTFNDTDFDSDRLKSLGIKTVRGPRHMTDGLVQALYPYLKEK >gi|311100538|gb|AEKO01000007.1| GENE 794 796195 - 796515 216 106 aa, chain + ## HITS:1 COG:NMA1473 KEGG:ns NR:ns ## COG: NMA1473 COG1929 # Protein_GI_number: 15794374 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Neisseria meningitidis Z2491 # 1 69 1 69 371 83 52.0 1e-16 MRILIAPDSFKESLSAKEVALALKLGFEKALPDTEFDLMPIGDGGEGTLDALAENLNLEK KSIEIPHAYTSDGSVFLPAMARLPFLKWLRFVAWSIYLKINAILFV >gi|311100538|gb|AEKO01000007.1| GENE 795 796455 - 797309 844 284 aa, chain + ## HITS:1 COG:lin2965 KEGG:ns NR:ns ## COG: lin2965 COG1929 # Protein_GI_number: 16802023 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Listeria innocua # 1 279 90 369 373 246 49.0 3e-65 MAAICGLEHIPKDKRNPLCITTQGVGELIVHLVKSGIRDFIIGVGGSATNDGGIGMAYGL GYCFYDSEGQELDPIGANLGLIKKVSSKNKVDLSGVTIRLITDVDNPLCGPHGATYIFGG QKGLSPSQFKKVDQDMAQFYQGFAPEVPKLAGSGAGGGLAAGLVAFAGAEIKSGIDFVLD CVDFDQRVKSADLVIVGEGRLDSQSLSGKAPVGVARRTPSAIPVIAICGSLKDGLPDFPV AGISAAFPIIGQVADLDQVLATAKENLYRTGLNIGNLIKLSKTL >gi|311100538|gb|AEKO01000007.1| GENE 796 797341 - 797799 424 152 aa, chain - ## HITS:1 COG:SPy0729 KEGG:ns NR:ns ## COG: SPy0729 COG5506 # Protein_GI_number: 15674784 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 119 1 119 152 104 47.0 5e-23 MTSLENKVLQCASGEKRLNPDELRQYFGTYAERVVLAVLLENAEKQTVIDHFPQILKDLQ AVYPNLSLKLSPKLADQIQFTYIKTAQALNISATIVDEAKAHSPYGLIVHSNQAENLDKV LFSELYPDILAPSETEPILEKKGFFAKLFGIK >gi|311100538|gb|AEKO01000007.1| GENE 797 798005 - 799303 1821 432 aa, chain + ## HITS:1 COG:SP1128 KEGG:ns NR:ns ## COG: SP1128 COG0148 # Protein_GI_number: 15900994 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Streptococcus pneumoniae TIGR4 # 1 432 1 434 434 761 91.0 0 MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKARYG GLGTQKAVDNVNNVIAEHIIGFDVRDQQGIDRAMIALDGTPNKGKLGANAILGVSIAVAR AAADYLEVPLYSYLGGFNTKVLPTPMMNIINGGSHSDAPIAFQEFMIVPAGAPTFKEALR WGAEIFHTLKKILKERGLETAVGDEGGFAPAFDGTEDAVETIIKAIETAGYKPGEDVFLG FDCASSEFYENGVYDYTKFEGEGGAKRTAAEQIDYIEELVNKYPIITIEDAMDENDWDGW KALTERLGGKVQLVGDDFFVTNTAYLEKGIAEHAANSILIKVNQIGTLTETFDAIEMAKE AGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAE YRGLKSFYNLKK >gi|311100538|gb|AEKO01000007.1| GENE 798 799359 - 800615 542 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 484 62.0 1e-136 MRLIKNTTELIGIKDPNIIISLVFETDTHIEVQAKLDYPAPPCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLCLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLHVSTSTVYRKLDQFTFKKHYDKLPAIMSWDEFGFKKGALAFIAQNYETNELIT ILDNRRQTTIRNHFLKYPLKVRRKVQFITMDMSGAYIPLAHRLFPNAKIVLDRFHIIQHL GRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLNFSEELANYYNLYQLLLFHFQEKRVDEFFELIEENMSKVNHYFQTVFRTFIRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100538|gb|AEKO01000007.1| GENE 799 801149 - 801532 251 127 aa, chain + ## HITS:1 COG:SA1057 KEGG:ns NR:ns ## COG: SA1057 COG2314 # Protein_GI_number: 15926797 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 63 127 3 67 67 60 49.0 9e-10 MNFVPKLGDEVEVHKVDDEIIIIKAEEKKDDNVKINIVNENNSSQNQSQVVYTQATTPGL HYVNKWVYIFLAIFLGGLGVHHFYAGYYGTGILFRILSFTGIPIIIGFIQDVIVLFKMPD VNGRIVV >gi|311100538|gb|AEKO01000007.1| GENE 800 801900 - 802049 107 49 aa, chain - ## HITS:1 COG:no KEGG:STER_0685 NR:ns ## KEGG: STER_0685 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 49 13 61 61 74 93.0 1e-12 MIEKKDFEAAKKFVDDNKDDLGEYFDQAKSLVSGNEMVSGALDKIKGLF >gi|311100538|gb|AEKO01000007.1| GENE 801 802256 - 804292 1820 678 aa, chain - ## HITS:1 COG:SPy0807 KEGG:ns NR:ns ## COG: SPy0807 COG1368 # Protein_GI_number: 15674849 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 2 664 63 725 736 890 69.0 0 MLSLINPIPLGLMLLGLGLYFKKRRFFYSTTIAIYVILNLLLIANVIYFGEFTDFITVNT ILASSSSAAGLGDSAKNLLEPSYIFYLIDIPFFIYAGFRKKLKTDSKPFNKRASFAVTAL STLLLSVNLFLAEVNRGELLTRGFSNNYIVRAMGIPFFTAYSGNLTYQASQARSSATADD MKKVEAYVKEHYAAPDPKYYGIAKGRNVIVIHLESFQQFLIDYKLQVDGQSYEVTPFLNS IYHSNETLAFSNFFHQVKSGKTSDAETLMETSLFGLSTGSYMVNYGGTNTAYAAPSILAQ TGGYTSAVFHGNTGSFWNRNNTYKQWGYNYFFDSSAFTEKTDENSFQYGLNDKYMFPDSI KYLEQMQQPFYVKYLTVSNHYPYTSLSGDEKEQGFPLAETKDETVNGYFATANYLDSAIK DFFDYLKETGLYDNSIIVMYGDHYGISDTRSSNLAELLGKNPETWSNYDKAMLQRVPYMI HIPGYTGGGISNTFGGEVDALPTLLHILGVDTSSYIQMGQDLLSPDNKQTVAFRTSGQYV TPQYTSYSGRLYNTQTGEEITNPDETTKKDNEAIRKTVATQLSMSDAVQTGDLLRFYTPN GLKHVDSSTISYTKQMNQLKQINKKLKDKSTSLYKQKGNKSTADLFKTPSYKELHPAESE SSSSSSESEPSSSSTEQQ >gi|311100538|gb|AEKO01000007.1| GENE 802 804597 - 805760 273 387 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 35 345 38 349 396 109 26 2e-22 MSILTVSPFAEKKIKQGKQLLLAEDFPNIAENNQLIYLYSQSKEFLGTGYLSSQNKGIGW FLSPKKQKLTVTYFQGLFEKAKAKRQSYYDNDLTTAFRLFNQDGDDFGGLTIDLYGDYAL FSWYNAFVYSLKDVIVEAFRTVFPEALGGYEKIRFKGLDFESDHLFGQESGDTFTILENG VTYEVFLNDGLMTGIFLDQHEVRDGLVNGLALGKSVLNMFSYTAAFSVAAAMGGAVETTS VDLAKRSRELSTAHFEANGFSMENHRLVVMDVFDYFKYAKKKGLSYDLIVIDPPSFARNK KRTFSANKDYHKLIAQSLDILSEHGTIIASTNAANMTVQQFKKQLRKGLGDVSADFVNLQ QLPADFTVNPNDSTSNYLKVYTIKVNK >gi|311100538|gb|AEKO01000007.1| GENE 803 805757 - 806434 857 225 aa, chain + ## HITS:1 COG:SPy0809 KEGG:ns NR:ns ## COG: SPy0809 COG0710 # Protein_GI_number: 15674851 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Streptococcus pyogenes M1 GAS # 1 225 1 225 228 323 67.0 1e-88 MKIVVPIMPTSLEEAQALELSRFDGADIIEWRADFLNKNSILTVAPAIFEKFAGFEIVFT IRTTREGGRLELTDAEYVALIKDVAAIYSPDYIDFEYFTRKAVFDQMLEFSNLVLSYHNF EETPENLMELLSEMANLTPRVVKVSVMPKHEQDVLDLMNFTRGFKAYNPEQEFVTMSMGK LGRLSRFAGDLVGSSWTFASLDNASAPGQVGLADMRRIREVLDAD >gi|311100538|gb|AEKO01000007.1| GENE 804 806424 - 807281 853 285 aa, chain + ## HITS:1 COG:SP1376 KEGG:ns NR:ns ## COG: SP1376 COG0169 # Protein_GI_number: 15901230 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 283 1 283 284 368 63.0 1e-102 MQIDGHTRLAAVVANPIKHSISPFIHNSAFEKTQVNGVYVAWEIPESDLAETVENIRRYN MFGINLSMPYKEAVIPFLDEISPAAQLIGAVNTVVNRDGHLIGHNTDGFGFFASLKDFSP RDAHLMILGAGGAAKAIVTQAVLDGAKKVSVYVRPQSLDKAKESFKSLLEQATCHLEFHA LNDLEYFQEELGQDDLLVNATSVGMDGESLPIPTDTKFPEGLLVADIIYQPFETPFLALA RKQGIEAVNGLGMLLHQAAGAFKLWTGKDMPTDAIWQELENIYNS >gi|311100538|gb|AEKO01000007.1| GENE 805 807294 - 808361 1298 355 aa, chain + ## HITS:1 COG:SP1375 KEGG:ns NR:ns ## COG: SP1375 COG0337 # Protein_GI_number: 15901229 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 355 1 355 355 551 74.0 1e-157 MKLEVNLTHNPYDIIIEKGALKTVGQWVKSLWEPQKIALITDNHVGGLYAERVKLSLEHE GFEVVVFDFLEGEASKNLKTVNKAYEFLIKNGMTRSDGILALGGGVVGDLAGFVASTYMR GIHFVQVPTSLTAQVDSSIGGKTGVNTPFAKNIVGTFAQPDGVLIDPNVLESLGKRELIE GMGEVVKYGLIDDPELWHLLESIDGSVHSILENSETIIYRSCNVKRKIVVEDEFEGGVRM YLNFGHTIGHAVEQTAGYGKVMHGEAVAIGMVQISRVAEEKGLMPKGITRQIAEMCVKFG LPVDYEPWRVEELYTALTHDKKARGNSIKTVIVPEIGKAAINQIPLVEMKEYLEK >gi|311100538|gb|AEKO01000007.1| GENE 806 808362 - 809528 1354 388 aa, chain + ## HITS:1 COG:SP1374 KEGG:ns NR:ns ## COG: SP1374 COG0082 # Protein_GI_number: 15901228 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 388 1 388 388 628 89.0 1e-180 MRYLTAGESHGPRLTAIIEGVPAGLPLTAEDINGDLKRRQGGYGRGGRMKIESDKVEITS GVRHGKTTGAPITLHVINKDHQKWLDIMAVEDIEDRLKTKRKITHPRPGHADLVGGMKYR FDDLRNSLERSSARETTMRVAVGAVAKRILAELDIEIANHVVVFGGKEIDVPENLTVAQI KELAQQSEISVVNQEREQEIKDYIDQIKKEGDTIGGVVETVVGGVPVGLGSYVQWDTKLD AKIAQAVVSINAFKGVEFGLGFKDGYLKGSQVMDEILWNEEDGYTRRTNNLGGFEGGMTN GQPIVVRGVMKPIPTLYKPLMSVDIETHEPYKATVERSDPTALPAAGVVMESVVATVVAN EILDKFSSDNMEELKEAVARHRDYVKNF >gi|311100538|gb|AEKO01000007.1| GENE 807 809558 - 810664 1210 368 aa, chain + ## HITS:1 COG:SP1373 KEGG:ns NR:ns ## COG: SP1373 COG0287 # Protein_GI_number: 15901227 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 4 367 3 366 367 525 71.0 1e-149 MSKKTIYIAGLGLIGGSLALGIKRDHPDYEILGYNRSDYSRNIALERGIVDRATSDFKEF APLADVIILAVPIKQTVAYLHELADLDLKDNVIITDAGSTKLDIVEAAERYLTGKNVQFV GSHPMAGSHKSGAIAADVTLFENAYYIFTPTSLTRETTIPELKDILSGLKSRFVEIDAAE HDRVTSQISHFPHLLASGLMEQAADYAQAHEMTNHFAAGGFRDMTRIAESEPGMWASILM TNGPAVLDRIEDFKKRLDHVADLIKAEDENAIWEFFDNGRKKRKEMEIHKKGGVESAFDI FVDVPDREDVILSIMELLRGTSLVNLRINEENREDIHGILQITFKNEKDRTHAKTVIEAN TDYHVVIA >gi|311100538|gb|AEKO01000007.1| GENE 808 810674 - 811012 516 112 aa, chain + ## HITS:1 COG:SPy0811 KEGG:ns NR:ns ## COG: SPy0811 COG3679 # Protein_GI_number: 15674853 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 4 110 5 111 113 107 61.0 4e-24 MTNIYDLANELERGIRALPEYKTLVEKKEAIAADAEASALFKEFTDFQEDFYAKMQAGTM PTAEEQAAVQELGQKVEANALLKEYLAAQQGLSVYLNDIERIIFKPLQELNS >gi|311100538|gb|AEKO01000007.1| GENE 809 811102 - 812052 986 316 aa, chain + ## HITS:1 COG:lin1775 KEGG:ns NR:ns ## COG: lin1775 COG0039 # Protein_GI_number: 16800843 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Listeria innocua # 1 297 1 296 302 222 40.0 8e-58 MSRKIGIIGMGNVGAAVAHGAIAQGLADSYVFIDINEKKAEADAQDFKDAMANLPSYANI VVNDYAALEDADVIISSLGNIQLQHNAGEDRFAEFPFTREAVYQVSQELKKLDFKGILLV ISNPVDAVSALYQEFTGWPRERVIGTGTLLDTARMKAAVGDDLSVNPKSVSGYNLGEHGN SQFTAWSQVKVKGQDITALTSEEERQNLFMASMKGGHKVFYGKGYTSYGIASAALRLVSI ILSDAQEEVAVSSYQATYQTYLGYPVILGRQGVVAPVHLSLSAEEDRLLEESANLIRNRV QEAVALLREKYTNTRE >gi|311100538|gb|AEKO01000007.1| GENE 810 812133 - 813416 1549 427 aa, chain + ## HITS:1 COG:SP1371 KEGG:ns NR:ns ## COG: SP1371 COG0128 # Protein_GI_number: 15901225 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 427 1 427 427 642 78.0 0 MKLETKAQGLHGSLRIPGDKSISHRSIMFGSLAKGVTTVRDILRGEDVLSTMQVFRDLGV TIEDDGDVVRIHGVGFDGLKAPQNKLDMGNSGTSIRLISGVLAGQDFDVEMFGDDSLSKR PMDRVTIPLRQMGVEVSGQTDRDLPPLKMHGSKSLKPIHYQLPVASAQVKSALIFAALQA DGESVIIEKEKTRNHTEDMIQQFGGQLQVDGKEIRISGGQSFTAQEVVVPGDISSAAFWL VAGLVVPNSKIVLENVGINETRTGIIDVIKDMGGKITLSDIDQVAKSATITVETSELKGT EIGGDIIPRLIDELPIITLLATQAQGKTVIRDAEELKVKETDRIQVVADALNAMGADIVP TEDGMIITGKTALHGAEVNTFGDHRIGMMTAIAALLVQDGEVDLQRAEAINTSYPSFFSD LEGLLNG >gi|311100538|gb|AEKO01000007.1| GENE 811 813409 - 813900 438 163 aa, chain + ## HITS:1 COG:SPy1351 KEGG:ns NR:ns ## COG: SPy1351 COG0703 # Protein_GI_number: 15675284 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 161 1 161 163 185 58.0 3e-47 MAKVLLGFMGVGKSSVAPYLDGRFVDMDQVIEEKIGMSIADFFAKEGEAAFRQIESETLE ELLQEGDDVIISTGGGVVVTERNRQLLAKNRKHNVWLHASFDVVYDRIQKDTKNQRPLFL NHSKEDFKAIYDGRMALYQDLADLVVTVDNRTPEEVARFIKCM >gi|311100538|gb|AEKO01000007.1| GENE 812 813891 - 814715 853 274 aa, chain + ## HITS:1 COG:SP1369 KEGG:ns NR:ns ## COG: SP1369 COG0077 # Protein_GI_number: 15901223 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Streptococcus pneumoniae TIGR4 # 1 274 1 274 282 374 67.0 1e-103 MYVGYLGPSGSFTHNAALKAFPEAELVSLGTITEVIKSYEEGRVDYAIIPVENSIEGSVH ESLDYLFHQADIRAVAEIVQPIKQQLMATKHHEKIEKIFSHPQAIAQGKKYIKQHFPHAK IETTASTAFAARFVADNPDQPYAAIAPHAAAKEYGLQILAKDIQEIEKNYTRFWVLGNTV PEIPLNQIDCKLTLALTLPDNMPGALYKALSTFAWRGIDLTKIESRPLKTVLGEYFFIID CDYTKEKLAQFALEELTAVGIGYKILGAYQVYEI >gi|311100538|gb|AEKO01000007.1| GENE 813 814727 - 816148 1225 473 aa, chain + ## HITS:1 COG:SPy1350 KEGG:ns NR:ns ## COG: SPy1350 COG1316 # Protein_GI_number: 15675283 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 473 1 483 483 454 52.0 1e-127 MTKSNNGPFTHHERLRYSYLLKNLAHLNGQQASEFNYLQGKLDAYEAERRYQAQREDYQA AWRQPYDNRYDYYQERDYEAANQLTEEGLPIYREEVAQSKPKRKKVQRQASPSATSAPRS KSQVAKKKRPKKKRRLKKVVKLVLSCLSLGVVFLVIAMAYQFYKGTDLSAAGNNGKSYQP AIVETFNGKDTKDGVNILILGSDQRVSQESTDARTDSIMVVNVGNKEGKVKMVSFMRDTL VNIKGASETDYSQDLKLNTAFNIGEQNNHQGAELMRETLKRNFDIDIKYYAMVDFETFAT GVDTLFPNGVEINAKFATIDGKKVSSVQVPDDLKMDKNGHVPNQTIKVGKQDMDGRTLLN YARFRKDDEGDYGRTKRQQQVMQAVMKQLKNPLSLFKGPEALGKVYSLTSTNMSMTDMLD LGLSNAGSFKKGVNSQTIPSDGDWIDSYDLYGGQGIEIDFDTYQAKLKELGFR >gi|311100538|gb|AEKO01000007.1| GENE 814 816163 - 817101 854 312 aa, chain - ## HITS:1 COG:SA1016 KEGG:ns NR:ns ## COG: SA1016 COG1275 # Protein_GI_number: 15926756 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Staphylococcus aureus N315 # 44 297 43 302 315 102 29.0 6e-22 MKVFFQKIPLALSSLVLALFSLSNQISHYTLIAQGIWCLASIGFILILGRLILGFEQIRE DLRNPVVASAFASFFMAAFLFASHLPLAQTGLSVTWIGLLGLYIAYIIFFSLRFMRPLSL NQVFPSWFVVYVGPAISLVTVPASVPTSIKGLILGVTGLATLVLFPLVLWRMKQIAIPHL YQPILAILAAPLALLITSSIKSNQKPATIILLALLLFSQAFFFYALNLFVKLVRKGFMPL FAAFSFPLVNSVNAFKAATTSLGLVNLATQLIYKVEFIIILVIMTYLLYHFLKLLYKALI EALHTKKEAGSV >gi|311100538|gb|AEKO01000007.1| GENE 815 817118 - 818182 1282 354 aa, chain - ## HITS:1 COG:PA2330 KEGG:ns NR:ns ## COG: PA2330 COG1960 # Protein_GI_number: 15597526 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 11 348 9 344 355 249 43.0 4e-66 MSHFSKEFLTWLDTNADHIDQESGPIADQLLEKIAENDVFKIGVPAEFDGLGGGPTQVVD VLDELAQHSLTASFISWGHRTFIEYILASDNAYPRETWLKELYTGERAGGTGLSNAVKFL SDIEELNVTISQEGDDYYLDGRLPWVTNLRSDKFAALFAADFKDGSQPWIITIPSEAEGL SRSEDLEFVSLQGANTASLTFDHVKLDPNWVLSKEGTDYIAKTRPNFLGFQFGLAFGLAK RSLNEVEASLNSNRSVLREESETTRNNLLAIQDQLFAGLNDDDYFIDKPRELFQLRIDIV DVVANSLLLELQASGGRGYLKESESSFIRRWNEGVFLPIVSPSAVQLRHILAAS >gi|311100538|gb|AEKO01000007.1| GENE 816 818229 - 818777 860 182 aa, chain - ## HITS:1 COG:SP0409 KEGG:ns NR:ns ## COG: SP0409 COG2128 # Protein_GI_number: 15900328 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 182 1 182 182 271 78.0 4e-73 MPDITIHTIETAPEEVKDVLQTVKDANGGFIPNLIGLLANAPTALETYRTVGEINRRNSL TPTEREVVQITAAVTNGCAFCVAGHTAFSIKQIQMTPQLLEALRNRTPIEDDPKLDTLAK FTIAVINTKGAVGDEAYNDFLEAGYTAQNALDVILGVSLASLCNYANNLAQTPINPELQE FA >gi|311100538|gb|AEKO01000007.1| GENE 817 818991 - 820352 1583 453 aa, chain + ## HITS:1 COG:SPy1346 KEGG:ns NR:ns ## COG: SPy1346 COG2265 # Protein_GI_number: 15675282 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 448 12 459 462 713 79.0 0 MLNKNAIVEVEIVDLTHEGAGVAKVDGFVFFVDNALPGEVIKMRVLKLKKNIGFGKVEEY VTLSPNRNQDIDATYLRSGIADFGHMTYEEQLKFKRKQVVDNLYKTAGISDVEVAETLGM DTPYAYRNKAQVPVRRVKGQLETGFYRKNSHDLIPIEDFLIQDKEIDKLIVFVRDLLRRY DLKPYDEKEQTGLIRHLVVRRGHYSGQMMLVFVTTRPKVFRIDQVIAMITEAFPSVVSII QNINDKNTNAIFGKEFRTLYGQDTITDSMLGNDYEISAQSFYQVNTEMAEKLYQTAIDFS DLNSDSIVIDAYSGIGTIGLSFAKQVKEVYGVEVIETAVEDAKKNAERNGITNAHYVADS AENAMAKWSKDGIKPDIIIVDPPRKGLTESFIKASVAMQPEKITYVSCNPATMARDIKSY QELGYELKKVQPVDLFPQTHHVECVVLLQRSKG >gi|311100538|gb|AEKO01000007.1| GENE 818 820562 - 820735 165 57 aa, chain + ## HITS:1 COG:no KEGG:SSUBM407_0456 NR:ns ## KEGG: SSUBM407_0456 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_BM407 # Pathway: not_defined # 1 57 1 57 57 81 82.0 8e-15 MQKEEQSSRQIVMCHLMAIMGINIEKATQLIDEMEQVGLIQFDDFGNVGLLVMEGQS >gi|311100538|gb|AEKO01000007.1| GENE 819 820732 - 821556 619 274 aa, chain + ## HITS:1 COG:no KEGG:SUB0789 NR:ns ## KEGG: SUB0789 # Name: not_defined # Def: replication initiator protein # Organism: S.uberis # Pathway: not_defined # 1 274 1 274 274 490 96.0 1e-137 MKRITANHYQTSERYYKLPKLLFESERYKDMKLEVKVAYAVLKDRLELSLSKGWIDEDGA IYLVYSNSKLMAILGCSKSKLLAIKKTLREYGLIDEVQQSSSEKGRLANKIYLGELEHEP TPVLNSDGGSVQKIPGGYQNQPGPVLNSATSETEVSETDMSETKGSESVIEDEEEKESLT SKKNDNDNFQRKVDRVTRYDKDYIWGLVHDQLRQVGLSQAASDYAMIHFDHRYQYALENM RFADRAETIAEYVFNGVLSEWTKVQRLKELKGGE >gi|311100538|gb|AEKO01000007.1| GENE 820 821558 - 821782 85 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFWWILLGIWGLGMIWFIFELITAPEMEDHCLSKDVTQEVRSFLVLSERNERHEVFRFVC RNWRLSTGVNPSGP >gi|311100538|gb|AEKO01000007.1| GENE 821 821715 - 823070 529 451 aa, chain + ## HITS:1 COG:SP1336 KEGG:ns NR:ns ## COG: SP1336 COG0270 # Protein_GI_number: 15901190 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Streptococcus pneumoniae TIGR4 # 4 403 5 407 407 603 72.0 1e-172 MKFLDLFAGIGGFRLGLTRQGHECIGFCEIDKFARKSYKAIYKTEGEIEFHDIRQVTDQD FRQLRGQVDIICGGFPCQAFSLAGRRLGFEDTRGTLFFEIARVAKQIQPRFLFLENVKGL LSHDKGETFQTILTTLDELGYDVEWQVLNSKDFQVPQNRERVFIIGHSRRYRPRFLFPIR GENSPVNLERLGNVNPSGKGMNREVYLSSGLSPTLTRGKGEGTKIAIPVLTPDRLEKRQH GRRFKGNQDPMFTLTGQDRHGVVVAGTLPTSFIQTGRVYDLSGLSPTLTTMQGGDKVPKI LCREEAPHLKIREATKLGYAKAIVGDSVNLAYPESTKRRGRVGKGISNTLTTSDNMGVVV AALEYRKDKWYEVTGIILEGKLYRLRIRRLTPRECFRLQGFPDWAYDRAENVSSKSQLYK QAGNSVTVTVIEAIAREFRKIEEEEKHEIIT >gi|311100538|gb|AEKO01000007.1| GENE 822 823054 - 823482 152 142 aa, chain + ## HITS:1 COG:no KEGG:gbs1369 NR:ns ## KEGG: gbs1369 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 1 142 1 142 148 190 64.0 2e-47 MKLLHSKSIRNCTELEEAIHQAEVERFSEMIASLPNYDCDIDVTFEDDYHKEMNYPLAYE SNLHRIFEFIETQDIKNGIDTYLTDENNLAFRAYGQGYSWNDKNDVVTTLITVKCYGEGM SPIDMSKVFTPPTQALEKELSV >gi|311100538|gb|AEKO01000007.1| GENE 823 823492 - 823875 164 127 aa, chain + ## HITS:1 COG:SP1348 KEGG:ns NR:ns ## COG: SP1348 COG1393 # Protein_GI_number: 15901202 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pneumoniae TIGR4 # 1 113 1 113 126 97 41.0 7e-21 MLEIYLSRNNSRNQKLLSFCDSHGISYSSKEVSNLSREDLLGLFTKSSDCFTLLSPSLQR FKGHREMKFSELVTLVLRKPDQNLRLPIVVCEDNVYPDMSLEETRTFLPRSQKVISFREH LFKDMTT >gi|311100538|gb|AEKO01000007.1| GENE 824 823885 - 824118 213 77 aa, chain + ## HITS:1 COG:no KEGG:SZO_17960 NR:ns ## KEGG: SZO_17960 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 77 1 77 77 127 87.0 8e-29 MNERFWENLESLVLEKGMTWADLARQMFKGQYVYPSEFNRLYQTFRHYKSHRLMPQVKWV EKIVSVLEIDYEDLFRR >gi|311100538|gb|AEKO01000007.1| GENE 825 824121 - 824702 236 193 aa, chain + ## HITS:1 COG:SP1346 KEGG:ns NR:ns ## COG: SP1346 COG1266 # Protein_GI_number: 15901200 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 1 193 1 195 195 114 40.0 8e-26 MKRLVVMYGAIHVNVLLVSLYLVGWLNGAWLTVLQVTFLTLILWSWKRFKIPKRNLSLKE RGIWLLGSLVVMVSLALIMSAMFSGSEANQETLVTVQDQIPVLSFIFFLLNASVVEEVFY REVLWGVLPQPVVQVLLTSFLFALAHHPSSLFTWVIYGSLGLILGIVRWQTDCLTSTLIH LSWNGIAFLLSLL >gi|311100538|gb|AEKO01000007.1| GENE 826 824764 - 825267 573 167 aa, chain + ## HITS:1 COG:no KEGG:SZO_17940 NR:ns ## KEGG: SZO_17940 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 167 23 189 189 267 95.0 1e-70 MKEGMMSSEQQERQAIQYAERSTMFTVKVLLKLLEWSARHALAQDSAYKIGVQKLEELLQ SPYAIESLNISKNILDKPVDVEKFKELVQSENLPIAISWQGDYLHFYAKDKSLLDKHLDE LLQKLVSNPEKLQGLTMDKTLDEEIAQAKEHIVMSEPSAVKTKEVIL >gi|311100538|gb|AEKO01000007.1| GENE 827 825267 - 827087 1496 606 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 139 565 157 562 591 213 33.0 1e-54 MVSGKKVFIFGVLGIAFGYFCHRLVLLYDSLPNQPPLERLAYLLGEGQNQVLKPLWNGHF TGRSVLGFCFGIVTMGLVYLYVSTGQKVYREGAEYGSARFGNNRERKAFVSKNPFNDTIL SRNVRLTLLEKKVPQFDRNKNLVVIGGSGAGKTFRFVKPNLIQLNCSNIVVDPKDHLAEK TGKLFLENGYQVKVLDLVNMINSDGFNPFRYVETENDLNRMLTVYFNNTKGNGSRSDPFW DEASMTLVRAISSYLVDFYNPPGSTKEEADSRRKRGRYPSFSEIGKLIKLLSKEENQDKS VLEVMFETYAKTYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFSLFNIQSVIDLTKRD TLDLKTWGTQKTMVYLVIPDNDTTFRFLSSLFFSTVFSTLTRQADVDFKGQLPIHVRSYL DEFANVGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKDAWKTILGNCDSLLYLG GNDEETFKFMSGLLGKQTIDVRNMSRSYGQTGSGSTSHQKIARDLMTPDEVGNMKRDECL VRIAGVPVFKEKKYYPLKHKNWKYLADKETDERWWNYQIDPLETQEPPFEPSEHKVRDLN TESTLY >gi|311100538|gb|AEKO01000007.1| GENE 828 827105 - 827347 478 80 aa, chain + ## HITS:1 COG:no KEGG:SSU98_0986 NR:ns ## KEGG: SSU98_0986 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_98HAH33 # Pathway: not_defined # 1 80 5 84 84 114 93.0 1e-24 MNQKLTGFVYGVDASSMFAQAMALLQKGMIATGAFLVVMGIINLSTNIKDGGPGVRNAIL EIVGGVMVGAAGAFITQITI >gi|311100538|gb|AEKO01000007.1| GENE 829 827364 - 828218 724 284 aa, chain + ## HITS:1 COG:no KEGG:SZO_17900 NR:ns ## KEGG: SZO_17900 # Name: not_defined # Def: membrane protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 284 1 284 284 417 95.0 1e-115 MINTLPSALVFLASEKISSDSLFEGFNVDLESTANLVKSLADYNPTVWSYMSAITKGIMQ PLGVAVLAVVLILEFSKMAKKIANSGGAMTFEAIAPMIVSYIMVAVVITNTTVIVEAILA VASHIIEGVAGVVSKGGTSYETISGIKGSGIIGKLIVGFFAILIWLVRLVSVMVVNLLIT IRFIQLYLMIPFAPLTIPTFLSDDWRSIGIGYLKNIMVYALQGVLIFLIISLVPLFESAG KLALSNGAGVMETLATAFGGLVQAILLIIALVGSQRTARSILGM >gi|311100538|gb|AEKO01000007.1| GENE 830 828280 - 828633 286 117 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0970 NR:ns ## KEGG: SSU05_0970 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_05ZYH33 # Pathway: not_defined # 1 117 35 151 151 202 85.0 2e-51 MNTRVFKDITKVQHRAWLGFTTRQVIFVLPAIAITILILGLNLFYWQFGDWFVYGLIFTF TIPLMLFGVYRPNDLPFETYLNYRWHYEMTIPDRTLTGQKGIQREKNKSLNETKDLF >gi|311100538|gb|AEKO01000007.1| GENE 831 828611 - 830947 1605 778 aa, chain + ## HITS:1 COG:MYPU_3830 KEGG:ns NR:ns ## COG: MYPU_3830 COG3451 # Protein_GI_number: 15828854 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Mycoplasma pulmonis # 222 738 291 826 853 81 23.0 8e-15 MKPKTSSKHKKTRKPKEEVLPTTVNTLLYQGLFPNGLMQVTPGYFSQSYLLGDVNYQTVG LEDKGAIMETYSDLINSLDDKTNFQLTIFNQRVNLDKFRKGVLYPLHEDGYDTYREELNR IMENNLEAGENNFSAVKLISFGKSEQNPKLAYRSLSQIGEYFKSGFSEIDAGFSLLSGEH RVNHLADMLRGENHLHFTYQDLVRSGQTTKHFIAPSSLSFKHKNHIEIDDHLLQIVYVRD YGMELGDKFLRELMQSDLEVMISLHAKGSVKSEAMTKLRTKKTLMESQKIGEQQKMARSG VYLEKVSQVIESNIDEADELIKTMTQTGDKLFDTLFLIGVFADNEDQLKHSLDIIKQVAG SNDLVIDNLSYMQEAAFNSLLPFGKNYLDGVSRSLLTSNIAVNSPWTSVDLQDKGGKFYG INQISSNIITIDRGKLNTPSGLILGTSGAGKGMATKHEIISTKLKEAETDTEIIIVDPEN EYSIIGQAFGGESIDIAPDSTTFLNVLDLSDDNMDEDPIKVKSEFLLSWIGKLLDRKMDG REKSLIDRVTRLTYKHFATPSLVEWVFVLSKQPEQEAKDLALDMELYVEGSLDIFSHRTN IKTDSHFLIYNVKKLGDELKQIALMVIFDQIWNRVVKNQKRGKKTWIYFDEMQLLLLDKY ASDFFFKLWSRVRKYGAIPTGITQNVETLLLDANGRRIIANSEFMILLKQAKSDREELVH LLGLSKELEKYLVNPEKGAGLIKAGSTVVPFRNKIPHHTKLFDIMSTDPEKMRQKNEN >gi|311100538|gb|AEKO01000007.1| GENE 832 830937 - 833069 1727 710 aa, chain + ## HITS:1 COG:no KEGG:SSUBM407_0946 NR:ns ## KEGG: SSUBM407_0946 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_BM407 # Pathway: not_defined # 1 704 1 703 933 969 71.0 0 MKTEKKTVKAARKNFQSSLKASRIHYRREKKGLKRSLPKRRFIMRRAEKAETREQRQTLK QTYQEEKDLVTDTFKEAIAYVSPRWLKSKEIKKYRLPQARQRLVVARKHLAEVKKAEKEE AVTSKFTYQKKPTESKTSRFQFQKEKSLERLQAEKEVKSAKRDVKQLKKAHQFKKPSTKV KRGLRYVASESLDVVAQDDDLEGIRTLKESVIKGRRYGRFTYQSGKLLVKSGQTGLRFTK TKAAHSKERYQNFKKGKGFTRQKHLKPQRRYRTFLKQARRHSVSGITRVIQAIKNSLTFF SSIALNPMTWVVSGLLFFLLLMMSFVIGISGTTLIQQDESELTKAYTHMTWEDAENTRTN PTGITYYTKIDDVMGFMNLKYQDYALEKFMENGDKTYHAYLSQLWQDLNGGDSLKSMLEL TKEPAYKLSDDDREDLKELSEEGTYLVLQELDNPFQNQTEDDALTMTVRYGYEVIDDKPT LHHHIILEAKENQVIVAPMDGKVSLDGENIIITSGKGLNKSQLTLFNIHTGRVSDGQKVQ AGEVIGQTKDGAGLKVTYQKVDDDSEKLVYVNPAFYFPKVIQLQTTILPTIGQFGGDEFA RAKATYEYLKSQGATNQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDEGWLS LNGPAIYNGRYPNILRRGLGLGQWTDTADGSRRHTLLLEYANRKTRSGMT >gi|311100538|gb|AEKO01000007.1| GENE 833 833087 - 833740 435 217 aa, chain + ## HITS:1 COG:SPy2025 KEGG:ns NR:ns ## COG: SPy2025 COG3942 # Protein_GI_number: 15675802 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 96 210 428 529 541 73 36.0 2e-13 MLHGDNPYYTNWLKDFLKNSGSPASLAQVFLIYWEGNSGDKLLERQTRATEWYYQIEKGF SQPNGGTAQSDPKALEAVRGDLYDNSIPCGGDGMGYAYGQCTWGVAARINQLGLKLKGRD GEKIPIISTMGNGQDWVATAARLGGETGKLPKAGAIISFAGGGHGSPTEYGHVAFVEKVY PDGSFLISETNYNGNPNYTFRKLSGVDGTISFAYTTR >gi|311100538|gb|AEKO01000007.1| GENE 834 833806 - 834408 319 200 aa, chain + ## HITS:1 COG:no KEGG:SP70585_1084 NR:ns ## KEGG: SP70585_1084 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_70585 # Pathway: not_defined # 1 200 1 200 200 308 79.0 6e-83 MSNYKDKIQTSIENLADGSVFISSDFLDIADYETVRKSLNRLVNEGVIHRIVNGVYYRPR YIELIGEYEAPSINEVATAIARKYNWTIAPSGNTALNLLGLSTQVPSQWTYISDGRYVNF TIGNTTLVFKRTTNSSISRMSQLTAMIIQAIKAMGKNNISEEQIRYLKGKLSHEEKEKIL EEGKTTAAWIYQILKKIGES >gi|311100538|gb|AEKO01000007.1| GENE 835 834411 - 835409 714 332 aa, chain + ## HITS:1 COG:no KEGG:Apre_1821 NR:ns ## KEGG: Apre_1821 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 330 1 326 327 345 53.0 2e-93 MLEFKKVSKVELQTIIRNASAQLGVNEVIVEKDYWVCFVLNYLFTMSEWQNAFTFKGGTS LSKCYGLIKRFSEDIDLILDWQVIGYGKNEPWQERSNTKQDKFNKESNQKSEEFLRNILV PQMRSDFVSLIEEEFQIDIDPNDPQTVLFAYPTNFHSDYVKQVIRLEIGALAAWTPSEIV EITPELYKIYPMLFVGESIPVRTVLPERTFWEKATILHHEANRPVDSNMPIRYARHYYDI YCLAHSIYKSRAFENRALLDKVVSFKEKFYPRKWAKYEEATIEKIRLLPDPYRLNEIEVD YNQMKEMFFGNVPTFEEVVETIASLETEIHGL >gi|311100538|gb|AEKO01000007.1| GENE 836 835621 - 836085 441 154 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 149 5 147 157 193 60.0 8e-50 MAQTAHSLSHTKWMCKYHIVFTPKYRRKIIYNQYRSSLGEIFHRLCQYKGVEIIEGHLMP DHVHMLVSIPPRMSVASFMGYLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQEQEKHDIALDKLSVKEYENPFRDNGK >gi|311100538|gb|AEKO01000007.1| GENE 837 836329 - 841233 3989 1634 aa, chain + ## HITS:1 COG:no KEGG:SAG1283 NR:ns ## KEGG: SAG1283 # Name: ssp-5 # Def: agglutinin receptor # Organism: S.agalactiae # Pathway: not_defined # 1 1630 1 1629 1631 2352 78.0 0 MTKQCHHHFLVNQEKAEKHVFRKSKKYRTLCSVALGTMVTAVVAWGGQVAQADEVVTSSQ GKTVQLTENLATNLPEAQTTPVVEQTDSLASTGQSDGAITVTVPHDVVTQAVNQATAEGV TTVQDQPMDLGNTTSASETSKQLDKAEADAAKQAEAITQVTNTYKADKAAYEQDKTRVEQ GNAALAASHKEATQVGKVLNSSVDGTASKIKDQDQSANVTVTTQTVPAGDGSTVSGYQDY TSAVAAIDKQNKENLSEYESKKKVADAIVAKNLQIQKENEAGLAKAKADNEAIDKRNQVG QKAVDDENKAGQAAVDVYNKDQQKLMTDREAEIAAITKRNKEKEEAAKKENDTIDAYNTK EMERYKRDLAEISKGEEGYISQALAQALNLNNGEPQARHSADTRNPNRIVAKGDAMLGGY SKILDSTGFFVYDTFKTGETLSFTYQNLQNARFDGKKITKVAYDITNLVSPAGTNAVQLV VPNDPTEGFIAYRNDGTGNWRTDKMEFRVKAKYFLEDGSQVNFTKEKPGVFTHSSLNHND IGLEYVKDSSGKFVPINGSTIQVTNEGLARSLGSNRASDLNLPEEWDTSYSKYAYKGAIV STVTSGNTYTVTFGQGDMPQNVGLSYWFALNTLPVARTVKPYSPKPHVTPKLEPIPEPIK VVPKTFISKTFTPEPPVSFKEKPLEKVTQPHLNLTKVTLPKEPAQEPLPKAPQVLTVHYH DYRLTTTPDIMKKVVNTDQVNLHDKTVAKDSTVIYPLTVDAFSPNRAKTTSLTFEDYLPA GYAFDKEKTQAENGNYTLTFDAAKNFVTLTAKETLLQEVNQNLTKSYQLMAPKLYGSLQN DGATYSNSYQLLINKETPNAYTVTSNVVTVRTPGDGTTTSRIEPQKKNENEDGVVINDTV VALGTTNHYRLTWDLDQYKGDRSSKETIARGFFFVDDYPEEVLDLVDQGTSNTTPEGKAV SGITVKAYASLSEAPKDLQDKLAHAKISPKGAFQVFMPNDNQAFYDQYVKTGTSLNLLTK MTVKDSLYGQTKTYRNKAYQVDFGNGYETDEVTNTLGSPAPKKQNLNKDKVDINGKPMVV GSQNHYTLSWDLDQYRGIKADKAQIAQGFYFVDDYPEEALLPDEASIQLVTSDGKAVSGV TVKTYTSLSEAPKNLQAALSKRKIVPKGAFQVFMAEDPQAFYESYVTQGQNITIVTPMTV RESMLNSGKSYDNVAYQVDFGQAYETNTVTNHVPKVTPHKTNTNKEGVSIDGKTVLPNTV NYYKIVLDYSQYKDLVVTEDVLTKGFYMVDDYPEEALSLNADGVQVMDKNGNLVKGISVK AYASLSKAPKVVQDAMAKRQFTPKGAIQVLSADDPKAFYEAYVKTGQTLVVTLPMTIKNE LTKTGGKYENTAYQIDFGLAYVTETVVNNVPKLDPQKDVVIDLSQKEKSLDGKEVALNQV FNYRLVGALIPGNRATPLIEYRFDDDYDESHDDYNGVYKAYTVVDVTLKDGTVLPKGTEV TKYTLQQVDTSKGTVTISFDQEFLEKLAEESEFQADVYLQMKRIASGKVENTVLHTVNGY TISSNTVKTTTPEPEAPTPNQPTPPQPPIPTQEPPVPASVLPNTGESQSLLALVGGGLLL GLAYGLSKRKMEDN >gi|311100538|gb|AEKO01000007.1| GENE 838 841234 - 841425 233 63 aa, chain + ## HITS:1 COG:no KEGG:gbs1355 NR:ns ## KEGG: gbs1355 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 1 63 1 63 63 61 69.0 9e-09 MEPKNIYTMDSDQDGLTDAQELALGTNPFSSDTDSDGLTDLEEVQQDLNPIQQGKERSYG LEL >gi|311100538|gb|AEKO01000007.1| GENE 839 841409 - 841960 489 183 aa, chain + ## HITS:1 COG:no KEGG:SZO_17790 NR:ns ## KEGG: SZO_17790 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 183 1 183 183 252 89.0 5e-66 MAWNYDTISRALSEMARENYEDMVKAFLAMELNIQNKSLLDTLYQDFRDIDDLSLVSDDL RLRADGSQRQIQEEMTDLLDKLYRTGEGASFIMEVIASNNISESLAQYEVLNEEDYSSLT LETLQDIIQKELSLTSQDYFGNVTYLALQKDLLDQKSHFLRQYVTTLMEKLPQEKDQRAL VLD >gi|311100538|gb|AEKO01000007.1| GENE 840 842011 - 846006 3301 1331 aa, chain + ## HITS:1 COG:pli0004 KEGG:ns NR:ns ## COG: pli0004 COG0827 # Protein_GI_number: 18450290 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Listeria innocua # 576 913 394 727 756 225 38.0 5e-58 MNQEQLLEMLRARLPRDQILLESFLRYQAAHFDEDWDSLIQNFTTQRGVVTSTVQVVRFE TEVSAFVEASPFDEATDLSSYTQTFGQAGLKKLPQLNSDEKALVIEVALFNLATRFQLLD QEGAYQSISVASLLKKGRAANLVNVYRVANNLSDRISRDIEQFLLTYEPEWVSTQETVEE REEAVEEKVVPEPSQDITFREEGLIIIASLDEEELSQLDLLTGQTEHLPAYEHLNLSQKF EILSHFDQVRNSRPKLPNLRRGEFDHEMEVTPIYEDDSLLTYLEADGTVYDLQRPLTPQE EVILTEMGQTILAENTEKLTRLGIDLADVDEQQRGILIDAAGRFHLNNADLALLGGYPKA TVTQLALATELLQMGLTHDKAEFFLTSQLDLEEARPIAYAFLREELTLEEARTFERDKLS QPDLSFREWREHVSQTKPEIMTQSLPQNPIVEEALNRYPIASIVTYKGQEFQVMAIEESG VNNLIRIELQNDFTDVIEQNPVLFLRTLEDITQALHVPSVEEKEEVEEPSQELDLFSFMD MEESQEAVSQVTTSLTSNKREAKQEEALSEDELEPEVTETPPATDFHFPEDLTDFYPKTT RDKVETNVAAVRLVKSLESEHRQATPSEQELLAKYVGWGGLANEFFDEYNPKFSKEREEL KTLVTEKEYSDMKQSSLTAYYTDPLLIREMWNKLERDGFTGGRVLDPSMGTGNFFAAMPK HLRENSELYGIELDTITGAIAKHLHPNSHIEVKGFETIAFNDNSFDLVLSNVPFANIRIA DSRYDKPYMIHDYFVKKSLDLVHDGGQVAMISSTGTMDKRTENILQDIRETADFLGGVRL PDSAFNAIAGTNVTTDMLFFQKHMDKGYVADDLAFSGSIRYDKDDRIWLNPYFDGEYNSQ VLGSYEVRNFNGGTLSVKGNSDNLLADVQMALKQVKAPRVVDNSDILITPDVMKKQVVDT SIPPEIRESLDRYSFGYKDSTVYYRDHKDIRVGTKTEEISYYVDEEGTFKAWDTKHSQKQ IDRFNDLEVTDSTALDVYVTEEATKRGRFKGYFKKTVFYEAPLSEKEVARIKGMVDIRNA YQEVIAIQRYYDYDKEEFAHLLGKLNQNYDSFVKRFGYLNSAVNRNLFDSDDKYSLLASL EDEGLDPSGKIVIYTKSLAFEKALVRPEKEVTAVSSALDALNSSLADGRGVDLDYMMSIY QTDSKASLIEELGDAIVPDPERYLNDREVVYVSRQDFLSGDVETKLEVVDLLIKEDNSDF PWVYYQGLLEDVKPPRVTLADIDYRIGSRWIPLAVYGKFAQEIFMGQTFDLTDQEVATVL EVSPIDGTMSY >gi|311100538|gb|AEKO01000007.1| GENE 841 846037 - 848832 2146 931 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 913 398 1306 1315 421 29.0 1e-117 MDRSLGVPGSRYDSGRKIFENLLNSNQPTITKQVEDGDKKKHVTDVEKTTVLRAKETQLQ ELFQDFVASYPEVQQMIEETYNSLYNRTVSKVYDGSHLTIDGLAQNISLRPHQKNAIQRI VEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPLYVVPSSLTAQFGQEIMKFFPTKN VYVTTKKDFAKAKRKQFVSRIITGDYDAIVIGDSQFEKIPMSHEKQVTYIQDKLQQLRDI KQGSDSDYTVKEAERSIKGLEYQLEELQKLERDTFIEFENLGIDFLFVDEAHHFKNIRPI TGLGNVAGITNTTSKKNVDMEMKVRQVQGEHDYRNVVFATGTPVSNSISELYTMMSYIQP DVLERYQVSNFDSWVGAFGNIENSMELAPTGDKYQPKKRFKKFVNLPELMRIYKETTDIQ TSDMLDLPIPEAKVIAVESELTEAQKYYLEELVDRSDAIKSGNVDSSEDNMLKITGEARK LAIDMRLIDPAYTLSDNQKIMQVVDNVERIYREGNGDKVTQMIFSDIGTPKSKEEGFDVY NELKNLLVDRGIPKEEIAFVHDANTDEKKNSLSRKVNSGEVRILMASTEKGGTGLNVQSR MKAVHHLDVPWRPSDIVQRNGRLIRQGNMHQEVDIYHYITKGSFDNYLWQTQENKLKYIT QIMTSKDPVRSAEDIDEQTMTASGFKALATGNPYLKLKMELENELTVLGNQKRAFHRTKD EYRHTIAYCEQNFPILEKRLSQYYRDIAQSLATKSLDFVMRFDNQTMNNRAEAGDYLRKL ITYNRSETKEVRTLATFRGFELKMTTRSPSEPLPDIVSLIISGSNQYSVSLDLKSDVGTI QRITNAIDHILEDQEKTEEMANNLKDKLAVARVEVEKVFPKEEDYQMVKAKYDILAPLVE QEAEVEEIDVALAKFNETIQPQHDQQLSLDF >gi|311100538|gb|AEKO01000007.1| GENE 842 848903 - 849202 436 99 aa, chain + ## HITS:1 COG:no KEGG:SZO_17750 NR:ns ## KEGG: SZO_17750 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 98 1 98 99 139 84.0 4e-32 MTQTVEAMRYQLEEWLAQGFTTPEDRANYQALKEQYEDETLDYSFSKREIIGQLDIIITT RENDFPDLDEVTKEGYLDLVAQLDNLDKGQADYYRKQLV >gi|311100538|gb|AEKO01000007.1| GENE 843 849218 - 849508 350 96 aa, chain + ## HITS:1 COG:no KEGG:SZO_17740 NR:ns ## KEGG: SZO_17740 # Name: not_defined # Def: membrane protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 95 1 88 89 82 75.0 3e-15 MIEQIIQSLFIIVAIGLILIVLYQIAKMLESLFIIGLIGFLAFTEVYGIYLFFTERYLYV EDLATNGMLSFTTFYIGFNILLVLGLVIKVVRSRMA >gi|311100538|gb|AEKO01000007.1| GENE 844 849733 - 851748 860 671 aa, chain + ## HITS:1 COG:no KEGG:SSUBM407_0401 NR:ns ## KEGG: SSUBM407_0401 # Name: not_defined # Def: membrane protein # Organism: S.suis_BM407 # Pathway: not_defined # 31 351 121 472 927 65 24.0 8e-09 MDELISGVKIKIFSHILFWSIVSYIYWVCNQYEILLFQTSDNNLDLLSLFSLVLTIWASF GVYVGFLQFMAGYDNKENGTYLGYQKMDFLTKSNVWYHVTNSWEFFGSLLLSIVIPIIVK FNTSVDIRYQYIWQAIVGFLLILFIFLLKFSLKVARITIFINKETDGGLKDVIQSDIKNR YNRYFNRLVKQKFSYGARESYFRQVKMDLSNIDNNTDKIIFLKVIYLKIIDTELLDKFED RDIVNYKYFIKEKYDLISNIDFKDDKLISFAITLFKLDAQIFDKLIKKDTRWIESDCIFE SMGGIFNKKPILDVECNHKIKRLSLNSYELSEINNIHIYMFKKIAKMAKNKQSNSQMVHL IQEKISQNNIRENYWETDNSGGAFIFEKTISTSNLRISKSYYEEIEKIDVFYSSYYSEIK YKSDSNNIYISLYPNILKIEFHFKDGRQYYIKRNEIRDYYDEYEENVWNILFDKYRDSDN LSDVFLPNLREPEIILDSFGDSDEVIIRDYDNKIGYSKTCFKYLTDHFEYIDNNNSQFTN LLEMVKTMSADYRGAFALYQLLYPENSNWDSSVESYIEILSEVLPPRKEEREKIYNDMVS IINEIKYGKSLGSEVLGKVFKTRDIELFDDEFLKDFKGIPKLKLIVVQSILSTNTYGFRR VELQDGWEKKI >gi|311100538|gb|AEKO01000007.1| GENE 845 851832 - 852308 282 158 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSEFLLKNMELLNSYDFGQLPLSSILLFEKLLYWKWWGDNKHDEQEFMVNLIKEEVEHRL SGYKYSLDGSLLKFFTLKLTEGQGNQYLRIVNDKDFKKEFKFALLNHLNRNQLTLDTYLD GIADELKKYDSVTIGIYEKELIKKEVEKIIFENYLSLE >gi|311100538|gb|AEKO01000007.1| GENE 846 852449 - 853087 610 212 aa, chain + ## HITS:1 COG:no KEGG:SZO_17680 NR:ns ## KEGG: SZO_17680 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 212 2 213 213 315 90.0 8e-85 MLNKMKARLLIGFGGLAVTSFMVMMGYTIGSQSVTNHTQKQIQTEAHKLLTKEKEKEKGN VLSDELVKEFLTQYYTKEKLGENNNRIKPYMTDSAYKEEVARQEESINQVYKDYMLDYRF ESAKIYVNTEDNEALAEVTYQVVYVSDVSDKAQKSIQTETRTLKLSYAKMSDKLLVNQVT IWNGKLEDLKETSDGVNSSIPKIQGTTTSETN >gi|311100538|gb|AEKO01000007.1| GENE 847 853127 - 854215 534 362 aa, chain + ## HITS:1 COG:no KEGG:gbs1348 NR:ns ## KEGG: gbs1348 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 1 362 1 361 361 578 79.0 1e-163 MTRIEAVKHKAILDVAGSLGYSFRRLSGQVYEHPEHDSFKIFADTNTFKWFSRDIQGDVI DFVQLVAGVSFKEALSYLETGDFEQAKIVEETYQPFRYYLSEEPFEQARTYLNDVRGLSD ETINALGRQGLLAQAYYQTKAFQESVLVFKSYNHQGQLEGASLQGLVKNNERHDRDYLKK IMKGSHGYIGISFDIGKPKRLIFCESVIDLMSYYQLRQKQLSDVRLVSMEGLKLSVIAYQ TLRLAAEEKDKLEFLGTVKPSRLTHYLHAIQETTTFFKTHPGLLTLAVDNDDAGRDFCRK LSEKGLPIETDLPPLQELKTKADWNDVVKSQRDLSLKDMIQSAKLQLIRCNPPPRRTTTL EL >gi|311100538|gb|AEKO01000007.1| GENE 848 854269 - 854493 319 74 aa, chain + ## HITS:1 COG:no KEGG:SZO_17650 NR:ns ## KEGG: SZO_17650 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 74 1 75 75 74 90.0 8e-13 MSVIERLDERVARQEEKVAKETEKLETYRSQLQTAMYQAFIKRQQNSPWTFDEALTQAFG QEEQPTLSDNRNEE >gi|311100538|gb|AEKO01000007.1| GENE 849 854497 - 854892 434 131 aa, chain + ## HITS:1 COG:no KEGG:SZO_17640 NR:ns ## KEGG: SZO_17640 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 131 1 131 131 132 79.0 4e-30 MTKDWTFDQPLDDKTPTSSSEERAKIAALFHQEKQQEPEEVDYVAAFEMEQQKSKDQSVS QPKPQEKIEPRQVPSSTITSDYKQHLANVMAQNNEDILQSQKKIEELHQLIDDKNKHNKK LQAISEAIDDL >gi|311100538|gb|AEKO01000007.1| GENE 850 854937 - 855221 115 94 aa, chain + ## HITS:1 COG:no KEGG:SZO_17630 NR:ns ## KEGG: SZO_17630 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 94 1 95 95 102 80.0 4e-21 MRLFKKQRHNQDSFKRLIHRLSGMSEADLHKVNHLLDVVFDSISQTTNDVKAPKDLQKEP TLDETITEAKNKLRTEQLEKRIEQFKQAKKPKSK >gi|311100538|gb|AEKO01000007.1| GENE 851 855291 - 855767 483 158 aa, chain + ## HITS:1 COG:SP1050 KEGG:ns NR:ns ## COG: SP1050 COG1396 # Protein_GI_number: 15900920 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 158 1 158 158 251 84.0 3e-67 MIGENIKSLRKTHDLTQPEFAKIVGISRNSLSRYENGTSSVSTELIDRICQKFNVSYIDI VGEEKMLTPVEDYQLTLKIEIIKERGAAILSQLYRYQDSQGIVFDDESNPWILMSDDLSD LINTKIYLVNTFDEVERYNGYLDGIERMLELARHQVVA >gi|311100538|gb|AEKO01000007.1| GENE 852 855821 - 856444 312 207 aa, chain + ## HITS:1 COG:no KEGG:gbs1343 NR:ns ## KEGG: gbs1343 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: not_defined # 1 207 19 225 256 345 86.0 4e-94 MRSLTRGKTTSVTPKAILLGGQSGAGKTTIHRIKQKEFQGNIIIIDGDSYRFLQPNYLTL QEEYGKDSVDYTKGFAGKMVEHLVDELSKQGYHFLIEGTLRTTEVPRKTAQLLKSRGYQV SLALIATKPELSYLSTLIRYEEVYAVNPNQARATPKEHHDGIVEHLVDNLRELETDKLFD QIQIYQRDRTCVYDSETDDGSVAEVLQ >gi|311100538|gb|AEKO01000007.1| GENE 853 856551 - 858809 1330 752 aa, chain + ## HITS:1 COG:PA1939 KEGG:ns NR:ns ## COG: PA1939 COG3593 # Protein_GI_number: 15597135 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Pseudomonas aeruginosa # 334 549 307 535 665 92 27.0 2e-18 MYLKSLSIKNYRKYGEKEQTINFAHSKWPEKTDDESESKKIDITEQYISKSSSLIVGKNN SGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYQENIESKSEEEIKKLDKFPFLE FQLVLGIDDENDLISSFEDILVVSGIKTVETQENQDIAEVTIDIKYEVADERSFREELIK LKNSNSETDNQQDKNIVYKKEIQYRQFLGLFSSNYFVLNFYPIGREEPTKEFSLSSLLKV ETIEANTVKNDKTLSQAYNKIVSTYIKNNDITTIDKLVGDINYQVKDMVDTNIKNILQSA VSSIESTKNLKMNLHPDVTLEKIFANSIIYEYQEGNNNIPESQFGMGYTNLMVIIAKIVD YIELYSKKDINGSVNILCIEEPESFMHPQMQELFIKNISKAIATLLGKKQQLDTFQIIIT THSTHILNSKIQSGNTLNNISYLGQAGANNIIKNISDDAIVSGRDIDKKAYEYIKKYLRL EVSDIFFADAVILVEGVSEETYLRYEIDKHPILKNHHIKVYRIDGAYAHQFISLLDLLEI KTVIFTDLDLKRSEDEKKIEIKSKVFEDPSDFDIIPSNIDDLEGKYGEMGSSLTTNGTLQ YFIKTELNDENAKFGEINSKIIDMLTDKEELIVEYKNISVYSQGKINRYYATSFEEAIIL TNAKNSEGSHKNKQSLIKLLQFVHPKKKYFGDIDESSEIADKSYMYQAQLSDGKSKFSTG IIYLSLTDDEFNLKQPKYIESGLKLLCDYFEE >gi|311100538|gb|AEKO01000007.1| GENE 854 858813 - 859769 537 318 aa, chain + ## HITS:1 COG:MA2140 KEGG:ns NR:ns ## COG: MA2140 COG0210 # Protein_GI_number: 20090983 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Methanosarcina acetivorans str.C2A # 22 270 13 238 612 66 28.0 6e-11 MAFTINPENKQLEIDIQQEINECLDNFESFCFDAGAGAGKTYALQKSIEHILKSEGEILK LSNQKILCITYTNAAKNEILDRLGKNSSVVVSTIHEFLWGFIAIQQELLTEEHKNKIKGE LEKIEQKINGNSLSSNVEQNEFRERICDEDFLKVFYSVSSSPAKTFKEVIKGFDEYFSPY LSSVKSFRDFVKDINKKYKLGITLKEIEDKKSKKVIYNPVQNRDKLENYVISHDTLLLYC ENIITSQNLLKRLFSDRYPYVLVDEYQDTDEKVVNIIDSIREYSNSKQNFVVGFLETPYK IFTVQEWVFCQIKKNIRV >gi|311100538|gb|AEKO01000007.1| GENE 855 859967 - 860830 350 287 aa, chain + ## HITS:1 COG:no KEGG:gbs1341 NR:ns ## KEGG: gbs1341 # Name: not_defined # Def: hypothetical protein # Organism: S.agalactiae_NEM316 # Pathway: Nucleotide excision repair [PATH:san03420]; Mismatch repair [PATH:san03430] # 1 286 386 671 672 400 74.0 1e-110 MKNDDISKARGFDELLSALKKFPRFSGGNYENVTNEFLQTNLQQMGWFLRDVLTFIDFIQ KSSDPNSTVKEIVQFISSSKSTLTFGNMKQFIGSLREISLSTLTIGECINGIVNIQEPIS GEEILRKIFLIDETSENVLLAIKNKAYSYFYYARDLEEDSESELSVIEEFFGLDVSQFIK WYKYIFDDLKDEGISYYTLHGSKGLEFDNVVVVLQDNFAKKKDYCKYFFENYDNRTDDVN RFNEIRNLLYVACSRAKINLHVVYIAEIQENILANIESIFGKVQNLI >gi|311100538|gb|AEKO01000007.1| GENE 856 861163 - 861522 360 119 aa, chain + ## HITS:1 COG:no KEGG:SPP_1056 NR:ns ## KEGG: SPP_1056 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_P1031 # Pathway: not_defined # 1 118 1 118 119 187 93.0 9e-47 MSEQYRDIRKEVNLTADELKQIEKMMEVDNYRHFSPFVRDKILMIDGKQLATKEWFSLWQ SQKFEQISRDVHEVLVVARENHQVTQEHVSILLTCVQELIAEVNQAQPLSREFREKYMR >gi|311100538|gb|AEKO01000007.1| GENE 857 861532 - 861897 321 121 aa, chain + ## HITS:1 COG:no KEGG:SZO_17590 NR:ns ## KEGG: SZO_17590 # Name: not_defined # Def: mobilisation protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 121 1 121 121 198 95.0 5e-50 MVYRYRTNLKKVFLTDSELHQLNERIAKSNCQNFSVYARKVLLNPNMSIVTINTDIYEQL VFELRRIGNNINQIARAINQSSLISQEQLQELSKGVSELITGVEKEFQVEVKRLKEFHGS H >gi|311100538|gb|AEKO01000007.1| GENE 858 861884 - 863749 1005 621 aa, chain + ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 1 406 1 402 402 434 57.0 1e-121 MVVTKHFATHGKKYRRRLIKYILNPDKTDNLKLVSDFGMSNYLDFPSYEEMVEMYNVNFT NNDKLYESRNDRQEKHQQNIHAHHLIQSFSPEDNLTPEEINRIGYETMMELTGGRFRFIV ATHTDKDHVHNHILINAIDRNSDKKLIWNYALERNLRMISDRISKMAGAKIIEKRYSYRD YQKYRQSSHKFELKQRLYFLMQQSKSFDDFLEKAVQLHVYIDFSQKHSRFMMTDRAMTKP IRGRQLNRREPYDEDYFRKAFAKAAIEQRLQFLLPRVKTLQDLLEQAKELGLAIQLKQKN VTFTLTENNHTISLGHQEVSKKALYDVSFFHDYFSERSDADIELSDNIKEDFEALLVEQS EKLSKVESIVSDYQTFSKNRKAVHEFEVELAPHQVDKEVEDGIFIKVAFGVKKEGLIFIP NYQLDEIENGEEKRFKVHLRETSSYFIYHKESSDKNRYMKGRALIRQLTQDSKSLPYRRR PNLKELQDKIAEVNLLIELNITGRDYTDIKDELVAEIATYDVTISELNDKTATLNKMAEV LINLKSHDSERRRLARYEFSKLNLTDSVTLEQIEREISNNQDQLSQLLDHYEEAVRKLET FVAVLNRTAPRTRVDYDKGLD >gi|311100538|gb|AEKO01000007.1| GENE 859 864355 - 864483 105 42 aa, chain + ## HITS:1 COG:no KEGG:SP70585_1297 NR:ns ## KEGG: SP70585_1297 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_70585 # Pathway: not_defined # 1 42 1 42 42 73 92.0 2e-12 MKYCKPTFESIATFKKDTKGLWTGKFRDVFGGRAIVRVTIEF >gi|311100538|gb|AEKO01000007.1| GENE 860 864597 - 865103 27 168 aa, chain + ## HITS:1 COG:no KEGG:SSU98_0918 NR:ns ## KEGG: SSU98_0918 # Name: not_defined # Def: putative asparagine synthetase # Organism: S.suis_98HAH33 # Pathway: Alanine, aspartate and glutamate metabolism [PATH:ssv00250]; Nitrogen metabolism [PATH:ssv00910]; Metabolic pathways [PATH:ssv01100]; Biosynthesis of secondary metabolites [PATH:ssv01110] # 1 163 7 169 581 284 88.0 8e-76 MLNKYFFEKYSDKKIIFLTKNLYRIVSVNNTKIYCLEDYVEEICSIIEQNAIRNFEETIS LLQECVINGLIIIEMADRTYVISPYLDTRLSWFENSKNIIFSDSSVEIAKYLKLKLSTKR LASQFVFGLPYYPFQTISLWEELVNIKPLNYLEITEKGCLEKRFQVMK >gi|311100538|gb|AEKO01000007.1| GENE 861 865178 - 865702 318 174 aa, chain + ## HITS:1 COG:no KEGG:SSU98_0918 NR:ns ## KEGG: SSU98_0918 # Name: not_defined # Def: putative asparagine synthetase # Organism: S.suis_98HAH33 # Pathway: Alanine, aspartate and glutamate metabolism [PATH:ssv00250]; Nitrogen metabolism [PATH:ssv00910]; Metabolic pathways [PATH:ssv01100]; Biosynthesis of secondary metabolites [PATH:ssv01110] # 1 173 201 373 581 355 98.0 3e-97 MGNEVSSDVSGGVDSATIAFTLNKMIPDFSILHAESSATANSDTKWATFIAKNLGRELKK FDSIEITEKRFAIEEGYINGIIPSFPLLWADSEGYLKSVITYQEGKKHPTHFLGIGGDEL FTPMPSNPWSIVRQENLGGLLYALKYSLIMRRPFFSCLLDLLDNRGYLETMTKK >gi|311100538|gb|AEKO01000007.1| GENE 862 865876 - 866331 209 151 aa, chain + ## HITS:1 COG:no KEGG:SSU05_0912 NR:ns ## KEGG: SSU05_0912 # Name: not_defined # Def: putative asparagine synthetase # Organism: S.suis_05ZYH33 # Pathway: Alanine, aspartate and glutamate metabolism [PATH:ssu00250]; Nitrogen metabolism [PATH:ssu00910]; Metabolic pathways [PATH:ssu01100]; Biosynthesis of secondary metabolites [PATH:ssu01110] # 1 148 234 381 381 286 95.0 2e-76 MIQSLIFQKSVLRQIQLTTNSIYWATPFLYKKLVEICLQIPAKYKVSSKLTKPVLQKALK GIVPIEVFNRGVKGDYSDALYGGYREAVHKNFHKLEQFELVKMGIVDVEKLKLELSLPAG NPNKIDYFEKLCSVERWIRQIKLYMKDERGL >gi|311100538|gb|AEKO01000007.1| GENE 863 866334 - 866585 159 83 aa, chain + ## HITS:1 COG:no KEGG:SSUSC84_0816 NR:ns ## KEGG: SSUSC84_0816 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_SC84 # Pathway: not_defined # 1 83 1 83 83 118 91.0 6e-26 MFNKESKTRLKIIKQDNGAIVFDKDQGIYFQTNEVGVKILELLSKNKNEEDIVSTISDAY SIETDVAKQDVKDFIQSLKKGGI >gi|311100538|gb|AEKO01000007.1| GENE 864 866589 - 868811 276 740 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 488 726 125 354 398 110 30 1e-22 MDMQLNQESYSYVQLKYRLLAQIALLVSYPLTKISPTRIEFLINKLSDSKLSATENEVVL ARDAICTVSRKCRNQDGCVKRSLGVIMFLLLLNKRASWCTGFAMNPFRSHAWVEVNGNPI KELEEVSAYERVVKTLDDKNEERKHMITEDIEKVNDTMTNVKFRDLLALIENKRKYFLIV LCLGILTSILTLLQPELLSKVISQKGVNLFNNPTLYTLIAITVGSTIISSLQYYFLQLMG ESAVFQSRKNLIIQFLKLPIYKYNDLSAGDLISRFSSDTSKLRTGIIQSTVALTSGLFLS LGAVFTLFLKDTYLAIITIISIALSFLFILLMSSLIQTASYKAHQGLGKMTAYLNRLIVG IRTIRSTNETNSELSKMLSEAQEVKNLGIGVARVQSIMTPISNFSLQLCGIIILGVGGYR VSTGQMSIANLTSFMLLMYIAISPVGQIFSSVTTISEALGALSRITEIIDLPKEEDNDII LNLETKSDRGKAIEFANVTFSYDSYKFQDFQSDDNYILKDITFKINSGDYVSIVGPSGAG KSTLLYLIERFYDITSGSIKIFGQDFRTMSREALRSNISYVEQNSPLVAGTILENLKMGN SNVTYDECCEALEKVGLEHLIQRGAFGIESQIGEGGLNLSGGERQRLAMARAILSDAKIL LLDELTSNLDSLSERKMKEAIKSMRGARTIIMVAHRLSTILDSDEIFVLEHGRLVGSGTH VELLESVPLYKELAKEQFLT >gi|311100538|gb|AEKO01000007.1| GENE 865 868824 - 869540 265 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 237 1 241 305 106 32 2e-21 MTNRIEIRDVTKSYKDGDILRNVSFTAEMGEVTAFLGPNGAGKSSTLRILLGLDRPSSGS ALIGGKKYCDIDCPLLTVGASFDGVGAPSDRTVLQHLKIAAASNGINFSRISEVLSTTDI EHKRYSKIGNLSLGEGQRLGIATALLGNPQYLILDEPTNGLDPSGIRWFRNFIREQANAG KTVLLSSHILSEVEAVTDRVVFINKGSIITSGTLHDIMNGFDNLEDVFFYLTGGNYEE >gi|311100538|gb|AEKO01000007.1| GENE 866 869530 - 870321 195 263 aa, chain + ## HITS:1 COG:no KEGG:SSUBM407_0997 NR:ns ## KEGG: SSUBM407_0997 # Name: not_defined # Def: membrane protein # Organism: S.suis_BM407 # Pathway: not_defined # 3 263 2 262 262 382 92.0 1e-104 MRSSMKGHNILSELYKIFYSKSTKIIIPIVLILQPLLSYISSKQILTVGLNATPETNSSL AEPIPPIEYIGFDAILLGLFAMIILGAILGSMEYKNSSLRTSLLLCSNKVVFFVIKFFVT SVFIFVVSFVSIYLSIASAQFGLGREGLNPLILNSNVWYFILLGSLSWSLLTVLAYSIAF YFKSSLGSLLFLLPQVYNLGSFLADRIQLAKYLPVSLGQDLIATSPLKITTPGRSVLFLS IWVLVISSFGYYKFLKEDVGKDR >gi|311100538|gb|AEKO01000007.1| GENE 867 870362 - 870607 193 81 aa, chain + ## HITS:1 COG:no KEGG:SP70585_1291 NR:ns ## KEGG: SP70585_1291 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_70585 # Pathway: not_defined # 19 79 34 94 235 96 93.0 3e-19 MVTIDCPSDSNFNTFICYFLHETPSNITEDYVLTQILESFYLGQAGIIIITILFIGQEFN GSTLRSSLLANPIRWKFFLQN >gi|311100538|gb|AEKO01000007.1| GENE 868 870802 - 871023 115 73 aa, chain + ## HITS:1 COG:no KEGG:SSUSC84_0812 NR:ns ## KEGG: SSUSC84_0812 # Name: not_defined # Def: membrane protein # Organism: S.suis_SC84 # Pathway: not_defined # 1 73 163 235 235 91 91.0 1e-17 MGMSLSFLLGLGQMLLQFSDAFLYFPIISTMNSFFMTENQPYIPSTVGIAIQFLWGILLL SFSILLFRKRVVR >gi|311100538|gb|AEKO01000007.1| GENE 869 871052 - 871261 60 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLQISKPSIDIIISSKIKSKPINEQISMLLTSLLVVTSNSDRSNEFFIKRRILSSSSIA NIRYTFFLS >gi|311100538|gb|AEKO01000007.1| GENE 870 871227 - 871736 270 169 aa, chain + ## HITS:1 COG:SPy1081 KEGG:ns NR:ns ## COG: SPy1081 COG0745 # Protein_GI_number: 15675069 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 2 167 57 227 228 135 43.0 4e-32 MSIDGLEICKSIREQIDVPIIFVTAKQLDSDLASGVKAGADDYIKKPFSITELVVRVRMH IQREERNRKNNKEIRTKNMIINVSKQEILIEEEIISLTKREFTILYTLASNPKRVYSVEE LYERIYPSESDAQFRSIAEYIYQIRSKLKPFSINPIKTQWGGGYSWNEN >gi|311100538|gb|AEKO01000007.1| GENE 871 871721 - 872818 288 365 aa, chain + ## HITS:1 COG:SPy1082 KEGG:ns NR:ns ## COG: SPy1082 COG0642 # Protein_GI_number: 15675070 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 67 356 157 442 448 112 31.0 1e-24 MERKLDFKALVKKTQWTIVKQFCLSVIVAYIFPLSTISIDIHSETHSIASGLLEIFFNVF SWVYICISLIVIVSINIKALLKKVKQEMEIVYHGSMWLTSVNTSSKLTILEFIETNKHIE LMQQRIKNMIQIEKDQKEDILFKVSAMAHDLKTPLTVIKGNSELLQFAPLSGIDFQCLRD IERASNQLDNYFNQLINYSKTFYSDQISFHQHSISNLSKILEQECAYLIGDNIDYKYDTK IERDCNIDLDLDLIIRSIANIVNNAIAYANDAKKKIRVTFEFADSNITVSIWNNGSKFSD DVLENFGKLFYREDTSRNSQFEHFGIGLAFVKQVMSIHSGDIQLHNKENGAMVKLIIPIK SSDYA >gi|311100538|gb|AEKO01000007.1| GENE 872 873146 - 873367 231 73 aa, chain + ## HITS:1 COG:SPy1088 KEGG:ns NR:ns ## COG: SPy1088 COG1396 # Protein_GI_number: 15675076 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 72 1 72 72 73 52.0 7e-14 MYRRIRDLREDCDYSQEYLARYLSCSQSAYSKIESGKRQIPVDFLIKISELYQVSTDYLL GLTDTPYRLKNKK >gi|311100538|gb|AEKO01000007.1| GENE 873 873826 - 874962 341 378 aa, chain + ## HITS:1 COG:SA0057 KEGG:ns NR:ns ## COG: SA0057 COG1961 # Protein_GI_number: 15925764 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Staphylococcus aureus N315 # 26 345 6 310 542 114 32.0 4e-25 MKNNNVEIIKADSLVRRRGDNSKRDSKRVAAYCRVSSDSEDQKNSYESQVRHYKDYISQR SDWELAGIYADEGISGTQVGKRQDFQRLINDCVNGEIDYIVTKAIARFARNTLDTLKYVR MLKDMQIGVYFEEENIDTLTMDGELLLTILSSVAQQEVENTSAHVKKGLKMKMQRGELIG FQGCLGYDYDVETKQLSINKKEAKIVCYIFERYLEGIGGKVIARELDELGYKSPRGLDHW NDTTVLGIIKNEKYKGDILMGKTFTVDPISKRRLSNLGEEDKYYIKDNHEPIISKEDFEK AQAIRLRRAGNKKTAANVNGKRERYSKMYAFSSMLECGFCGSLLSRRSWHCRSDYRKVVW HCVTSIKKGKNTVNIVKD >gi|311100538|gb|AEKO01000007.1| GENE 874 874989 - 875642 492 217 aa, chain + ## HITS:1 COG:no KEGG:SPCG_1217 NR:ns ## KEGG: SPCG_1217 # Name: not_defined # Def: resolvase family site-specific recombinase # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 202 389 590 597 321 89.0 1e-86 MEAYRQLYHSNENIVSDLLETIESELNDNSLNKELKKITNKLRTLLKKEENLVNLKLEGK ISDSIYNEKYNELSLEKEYLAEEKVNVETTLKSEIDVKKRLTEFKQLLSSQKMLTEFDRT VFESIVEKIIVGGVNSDGEIDPAMLTIMFKTGETQNKDGKQFKSKRKNAKLESDKLCPQN SDEDKKLYPQGTDNTRGVCSFARKSLEPLNERDNEKP >gi|311100538|gb|AEKO01000007.1| GENE 875 876242 - 876694 148 150 aa, chain + ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 3 140 14 146 269 119 47.0 2e-27 MQALLAGLFNWFCTLIGASLVFFVKTIHQKFMDMMMGLAAGIMTAAAVWPLLVPSLDYSQ SIATNRFYWLTTAVGSIVGGLFIRFINYLVPDLHLNHQMSDKEGILNPKRPLSKTMLLYL AVVFHNIPEGLAVGVAFASVANLATRLSFT >gi|311100538|gb|AEKO01000007.1| GENE 876 876695 - 877042 303 115 aa, chain + ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 1 114 155 268 269 111 56.0 3e-25 MSALGLALGIGIQNIREGSALSLPLRVEGRSRKSAFYYGAMSAIVESIAAVLGAYAVMSM TQLLPYALLFAARAMIYVAVEELVPGAQEHKNTDIATSGVMAGFLIMMLLDTTLV >gi|311100538|gb|AEKO01000007.1| GENE 877 877057 - 877419 323 120 aa, chain + ## HITS:1 COG:FN0260 KEGG:ns NR:ns ## COG: FN0260 COG0640 # Protein_GI_number: 19703605 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 7 118 14 125 125 91 43.0 4e-19 MSQCLTACNPDLIQGVHETEFDTVTLLNMSNFFKAISDPTRLRILQAVRQNPICVGDLAI ALQMTKSAISHQLRYLRDCQLVKGEKKGRMTYYELADDHVAAVLSLTLKHLKEEKHEERV >gi|311100538|gb|AEKO01000007.1| GENE 878 877403 - 879490 1537 695 aa, chain + ## HITS:1 COG:CAC2241 KEGG:ns NR:ns ## COG: CAC2241 COG2217 # Protein_GI_number: 15895509 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 1 687 6 698 699 636 48.0 0 MKKEYELRGIDCGNCAAKIERAVNQLEQVESATVNLIAQKLILETKSEDGIDKEIIDLVD AIEPGIEVISEKKEEALPEKRDWAKELLLAVMILFAFGFFLPEEYFWIRLVYYLTLYIII GHKVLIKMVQNIQRGNLFDENFLMSIATLGAFLLGEFPEAVAVMLFYQIGEYFQDKATSQ SRQSIARLMDIRSDKAWRLEGGETVQVDPETVRVADHILVKPGEKVPLDGLVREGRSILD TSALTGESLPREIGVGEDITSGVINLTSPLVIEVSKTFSQSTVNKILELVENASNKKAET ERMITRFSRVYTPVVVGIAFLLASLPPLLGLGEWSTWLYRALTFLVISCPCALAVSVPMS FFGGLGGASKLGVLVKGGNYLEALAKLDTVVFDKTGTITKGIFAVDTVVNAEGVEDDILY LAAHLESYSNHPIANSIRTAYGQEVDENRVSQITELPGQGMSGRVDGRQLYLGNARLMEV QGIAYPAIDSTGTVLYLAEDSHFLGYFLIADQVKETSIEALKDLQAVGIKKTVLLSGDRQ AVVDEFAQQFAFNDAFGDCLPQDKVSTFEEILTQSQQAVAFVGDGVNDAPVLARADVGIA MGGLGSDAAIESADVVLMDDDLGKLPQVIRLAKKTVRIAQQNMTLAIVVKLIFLVLSGLG ISNMWEAIFADVGVTLLAVWNALRVLRIDTSTLSK >gi|311100538|gb|AEKO01000007.1| GENE 879 879705 - 880478 643 257 aa, chain + ## HITS:1 COG:CAC2472 KEGG:ns NR:ns ## COG: CAC2472 COG0596 # Protein_GI_number: 15895737 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 1 257 1 249 250 158 33.0 1e-38 MKFHEFGDKNLPPILLIHGGGSSWWNYLRQARILSEEYRVILPTLNGHGEEYQLDYVSTE DSALEILDYIKANCGGKLFAIGGVSLGGQIAMELLSLDSEIAEKAIIDGSLCVPQPKLAK ISIFLVSLFGKLMLNKFSCKLQLSMMNKLYPKLAYPEEIKAYYLEDLPRTPVKTMVTIYK NYMGRYKLKDTISASKAQVLYIYGEKELNCVKASAKLFQQLHPNTILYEAKGYNHGYLSA YLPQEWIDLVEPFLKKK >gi|311100538|gb|AEKO01000007.1| GENE 880 880491 - 880931 234 146 aa, chain + ## HITS:1 COG:no KEGG:LCRIS_00065 NR:ns ## KEGG: LCRIS_00065 # Name: not_defined # Def: acetyltransferase # Organism: L.crispatus # Pathway: not_defined # 7 145 6 144 144 162 55.0 3e-39 MNRIVDDQITLIPYYRNDDISLLWYQDSEVCKQVDNTDQIYNLTKLHKMYDYLTSHGSCY YIQYEGVLVGDVTLQDNSELSIVISKQYQNLQIGRRCVSEMIQLAKEQKMVKVSAQIYPF NTQSQRMFLALGFQKVDVEWYEYKLI >gi|311100538|gb|AEKO01000007.1| GENE 881 880992 - 881207 104 71 aa, chain - ## HITS:1 COG:SP1582 KEGG:ns NR:ns ## COG: SP1582 COG3464 # Protein_GI_number: 15901424 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 2 70 349 417 418 110 86.0 7e-25 MIFKTFLKDKEKIVNALQLPYSNAKLETTNNLIKLIKRNAFGFRNFDNFKKRIFIALNIK MERTTIALSRC >gi|311100538|gb|AEKO01000007.1| GENE 882 881283 - 882455 843 390 aa, chain - ## HITS:1 COG:SP0101 KEGG:ns NR:ns ## COG: SP0101 COG2807 # Protein_GI_number: 15900044 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Streptococcus pneumoniae TIGR4 # 3 390 2 388 388 372 56.0 1e-103 MKQKHSHFLIPGILLLGIVLRAPFTTLSTVLSDIASGLGIEVSSLGLLTSLPLLTFAIFS PFAASWAKRFGIERLFLGVLIVMTLGSALRTVNLPLLYAGTLLVGAGIAFINVLLPSLIQ ANEPNQLGFLTTLYITAMGLSTAVASSVAVPITKATSWQGLVWVLTAVCALALVVWLPNV RHNHYLEQDTSTSENSGSWYKSGKVWAIMIFGGLQSLFFYTTITWLPTMATQAGVGEANA GILASVFTLTSIPFSMIVPSLITKLSNRNRHLMLVTTVLAGFVGVAMLLVNTDSFVYWLV LNLLIGSSASVLFPYMMVAFSMKASTPEKTAQLSGLAQTGGYIFAALGPVLFGSSQQLFN SWTPAVLILLVLTLIMGIALYKVEKTDVIL >gi|311100538|gb|AEKO01000007.1| GENE 883 882685 - 883527 926 280 aa, chain - ## HITS:1 COG:SP0742 KEGG:ns NR:ns ## COG: SP0742 COG1307 # Protein_GI_number: 15900637 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 280 1 280 281 429 75.0 1e-120 MKWKIIADSGCDYRSLDNLAPDTEFVSVPLTIQVGETIYRDDAQLNIDQMMEEMYATTTA SKSACPSPDDYMKSFEGADNIVVVTITGTLSGSYNSAEIAKKIYLEEHPDTKIHVIDSLS AGGEVDLLVRKLNHLVAEGLEFDQVLDAITAYQAKTKLLFVLAKVDNLVKNGRLSKLVGT VVGLLNIRMVGEASKTGTLELLQKARGQKKAIKAAFDELIKAGYTGGHITIAHRNNDKFI EQFSALVREKFAQASIEVLPTSGLCSFYAEEGGLLMGYEI >gi|311100538|gb|AEKO01000007.1| GENE 884 883654 - 884223 381 189 aa, chain + ## HITS:1 COG:SP0743 KEGG:ns NR:ns ## COG: SP0743 COG1309 # Protein_GI_number: 15900638 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 186 1 185 185 201 63.0 8e-52 MAERKISEKSLENLKRFNQENKAITRESIEISLLQLLEKKDLKKITISELVERAGVSRAA FYRNYGSKEEILKSIFESCITKITKSLDSYNLKTDLYQVWVYLLKEVKEEAKIISLAIDY NFEQVLTKAVYDFLEKRNGSSSNGAGSYLNSFWSSAIVSVISKWVKDGMKTPAEKIAKLG LPLFPQKKK >gi|311100538|gb|AEKO01000007.1| GENE 885 884258 - 884893 707 211 aa, chain + ## HITS:1 COG:SP1260 KEGG:ns NR:ns ## COG: SP1260 COG3142 # Protein_GI_number: 15901120 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Streptococcus pneumoniae TIGR4 # 3 211 2 210 210 236 55.0 2e-62 MPIYEFCAENVTYLEKAFQAGAQRVELCDNLAVGGTTPSYGVIKAAVGLAKDYQAKVIVM IRPRGGDFVYSQQELAIMLEDIKCARELGVDGFALGALTSENQLDTEALKTLLDASRDLE VTMHMAFDQIPKAAQSSAIQWLKDHGVTRLLTRAGTPETALDLRLKRYAELVQLADGQLD ILAGGGISVANRDQFLAILGLEQVHGTRVVF >gi|311100538|gb|AEKO01000007.1| GENE 886 885017 - 885289 218 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228478168|ref|ZP_04062776.1| ## NR: gi|228478168|ref|ZP_04062776.1| hypothetical protein STRSA0001_0769 [Streptococcus salivarius SK126] # 1 90 1 90 90 119 95.0 6e-26 MLDNLLKKNPILGVIIYPLLGLGAIWLGHYYSQSLSLLEKTGGQIKVNTFVYIAYQLGGT KLVMGFFILLALFFFYLGYTYLKKLGNTQK >gi|311100538|gb|AEKO01000007.1| GENE 887 885408 - 886646 956 412 aa, chain + ## HITS:1 COG:no KEGG:LSA0827 NR:ns ## KEGG: LSA0827 # Name: not_defined # Def: lipoprotein precursor # Organism: L.sakei # Pathway: not_defined # 255 409 57 204 380 86 36.0 1e-15 MKAEEWLTYFIKIYGRRPKMTEVDEAIQNGSLLANRAEVEALLPASKKGFWESLSQFVAT HKVVASIVAVFCVTLLGGGVIFVWHSHNLQTQKQPSLTVASSNSQTFSLDKSKQSSSKAS ETSSSYSSQSQSASSVAKIPAMDVEAIRNGDFSSIEGDWVSDSGHVVTITKSGLTKSEET GSTDGKTVIKDFKGQPMFYFADNSPGHGVNPFVPVPANQAAPSPDNSVKDTDRLVQIPES AGPGVVYTSYYRVKNKSQSSQTSSTNTTALWNSDKATKLASYMVEFGHKMNQESYRRLTP NGSDDFYGAMSFAKNNRITVGEKTEQNAPMTNQQKVDVAFSDDGTGTADYIIVDSYGYAG SAMILYHFTIHKGQPVVLVSMQNQGNPENMYYMYPTNNKDIQEAFANIVNDK >gi|311100538|gb|AEKO01000007.1| GENE 888 886781 - 887620 601 279 aa, chain + ## HITS:1 COG:no KEGG:SGO_1347 NR:ns ## KEGG: SGO_1347 # Name: not_defined # Def: membrane associated lipoprotein # Organism: S.gordonii # Pathway: not_defined # 31 277 33 279 281 360 74.0 4e-98 MKILKKQTLILLTISNLLLIGLAVFAHIHKKEEQPSYSNLNSKASISEVRSILSKHLDEG SVDSFINLVKDYNDTVGSVGLTEDFKPFTKTDYDVEKISSLWTAKHGDFIGTNCRINTYM LLKGKIKIPQVKSDSELLFQDKDAIDKGKIFDAKEQANFEILFSRVKTEPTQDVKVHAKH MEDYYKQFTFDDKACMLSVVVHDNLDGDSLFVGHVGVLVPTTDGYLFVEKLTFEEPYQAI KFASKKDCYKYLTTKYKDYTGPGLAKPFIMDNGKWVDMD >gi|311100538|gb|AEKO01000007.1| GENE 889 887762 - 888073 380 103 aa, chain + ## HITS:1 COG:no KEGG:SSA_1453 NR:ns ## KEGG: SSA_1453 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 102 1 102 103 144 91.0 1e-33 MKLKDFTEKEQEQINQGLSTAEISDKEAAKKLLDLVPLEWIKRIPFFVRGHATTKTVERV AKQYPELYAVAKRQGDLPEKEREELRKIMTAIFEEKMNKHKIK >gi|311100538|gb|AEKO01000007.1| GENE 890 888125 - 888364 211 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228478267|ref|ZP_04062875.1| ## NR: gi|228478267|ref|ZP_04062875.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 20 79 4 65 65 72 67.0 6e-12 MFYYCKKENGYKQEADDDPKTIMVDAILLSISVTLIGLGFSVYNYIIFDKPFITTKGLLA AFYLGATVVAISLSKSNRK >gi|311100538|gb|AEKO01000007.1| GENE 891 888414 - 888833 491 139 aa, chain - ## HITS:1 COG:no KEGG:spr0179 NR:ns ## KEGG: spr0179 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_R6 # Pathway: not_defined # 5 139 33 172 172 87 43.0 1e-16 MTLSKKLTLSLASMAVLGLLAACSNQKAQTPESSASTQQSSSKVSPSQSSEASKQTNGLD GTYKGTDESDRITLTISGNTGTWEEDEADGEKDSKSVTVNPANQSLTIGDDIKYYKLDGN QLTIEDDDRDSDDTIILTK >gi|311100538|gb|AEKO01000007.1| GENE 892 889502 - 889747 137 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228478314|ref|ZP_04062922.1| ## NR: gi|228478314|ref|ZP_04062922.1| hypothetical protein STRSA0001_0740 [Streptococcus salivarius SK126] # 31 81 1 51 51 73 72.0 4e-12 MVSISLLGHNISTHTDEKLGRLQIQNQGKDMLEKFIRIQTTDASIIDDIVNTSTPSNFTN GKKLHEREASEEYLSLDGDLI >gi|311100538|gb|AEKO01000007.1| GENE 893 889763 - 890062 235 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228478208|ref|ZP_04062816.1| ## NR: gi|228478208|ref|ZP_04062816.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 2 99 25 122 135 155 78.0 5e-37 MANIGQILEQILAILLNTKIYLIAFSPANLHLPCQTRASIQWMKLRTPENLDRSNKTPEE IAKTYGCHFINCNAEPVDDIKEQKAERTYDGVHLYANAY >gi|311100538|gb|AEKO01000007.1| GENE 894 890197 - 890811 503 204 aa, chain + ## HITS:1 COG:no KEGG:stu0656 NR:ns ## KEGG: stu0656 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 203 1 203 203 316 90.0 3e-85 MWKWFKRFIVLVIVLFFAMVALLIPDKIDSQDQLKNVPTQTSLVDLVQAGIGGTSLSSGS LSTEINLDSNQFRQVLKESIAESNDETLQNSTVELNDSYLTAKVPVSLGPIESTFSLDFT VSTNKEVILLDLAGAHLGRLPVPKSLVLPYLKKSIAQSSSGVRVVNNQIQLKLPEIGYEI EQATINNSKMKVKLNIPISLPTSW >gi|311100538|gb|AEKO01000007.1| GENE 895 891065 - 891358 263 97 aa, chain + ## HITS:1 COG:no KEGG:STER_0709 NR:ns ## KEGG: STER_0709 # Name: not_defined # Def: CRISPR-system-like protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 94 1 94 1121 177 94.0 1e-43 MSDLVLGLDIGIGSVGVGILNKVTGEIIHKNSRIFPAAQAENNVERRTNRQGRRLTRRKK HRRVRLNHLFEESGLITDFTKVSINLNPYQLRVKIDR >gi|311100538|gb|AEKO01000007.1| GENE 896 891396 - 894464 2206 1022 aa, chain + ## HITS:1 COG:NMA0631 KEGG:ns NR:ns ## COG: NMA0631 COG3513 # Protein_GI_number: 15793618 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 1 693 134 788 1082 200 27.0 1e-50 MVKHRGISYLDDASDDGNSSVGDYAQIVKENSKQLETKTPGQIQLERYQKYGQLRGDFTV EEDGKKHRLINVFPTSAYRAEALRILQTQQEFNSQITDEFINRYLEILTGKRKYYHGPGN EKSRTDYGRYRTSGETLDNIFGILIGKCTFYPEEFRAAKASYTAQEFNLLNDLNNLTVPT ETKKLSEEQKNQIINYVKNEKAMGPAKLFKYIAKLLSCDIADIKGYRIDKSDKAEIHTFE AYRKMKTLETIDIEKMSREELDKLAYVLTLNTEREGIQEALEHEFVDGNFSQEQIDELVQ FRKANSSIFGKGWHNFSVKLMMELIPELYATSEEQMTILTRLGKQKTTSSSNKTKYIDEK LLTEEIYNPVVAKSVRQAIKIVNAAIKEYGDFDNIVIEMARATNEDDEKKAIQKIQKANK DEKDAAMLKAANQYNGKAELPHSVFHGHKQLATKIRLWHQQGERCLYTGKTISIHDLINN PNQFEIDHILPLSITFDDSLANKVLVYATANQEKGQRTPYQALDSMDDAWSFRELKAFVR ESKTLSNKKKEYLLTEEDISKFDVRKKFIERNLVDTRYASRVVLNALQEHFRAHKIDTKV SVVRGQFTSQLRRHWGIEKTRDTYHHHAVDALIIAASSQLNLWKKQKNTLVNYSENQLLD IETGELISDDEYKESVFKAPYQHFVDTLKSKEFEDSILFSYQVDSKFNRKISDATIYATR KAKLDKEKKEYTYTLGKIKDIYALGTKTPSKTGFYKFLDLYKKNKSQFLMYQKDRKTWDE VIEKILEQYRPFKEKDKNGKEVDFNPFEKYRIENGPIRKYSRKGNGPEIKSLKYYDNLLG RFVDITPSESKNPVALLSLNPWRTDVYYNTETRKYEFLGLKYADLCFEKGGSYGISKVKY NKIREKEGIGKNSEFKFTLYKNDLILIKDTETNRQQVFRFWSRTGKDNPKRFEKHKIELK PYEKARFEKGEELEVLGKVPPSSNQLQKNMQIENLSIFKVRTDVLGNQHIIKNEGDKPKL DF >gi|311100538|gb|AEKO01000007.1| GENE 897 894625 - 894990 96 121 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 7 100 321 414 422 114 68.0 3e-26 MPTNFDQLLLFHFQEKRVDEFFELIQENLNVVNHYFKTVFRTFLKHKQYIKNALETDYSN AKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKRRPIRSSLDVSFSSPTTVDKEP F >gi|311100538|gb|AEKO01000007.1| GENE 898 894974 - 895168 82 64 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 64 256 319 422 60 50.0 9e-10 MNQFDKKSLPYRALKNHLRLFQMDSRKLSLNSFYSKTFRQTLVPHEIIEKTLVFSEEIAN AYKL >gi|311100538|gb|AEKO01000007.1| GENE 899 895556 - 896425 1096 289 aa, chain - ## HITS:1 COG:SP0105 KEGG:ns NR:ns ## COG: SP0105 COG1760 # Protein_GI_number: 15900048 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Streptococcus pneumoniae TIGR4 # 1 289 1 289 290 399 80.0 1e-111 MFYTIEELVQQADRDYQGNIAELMIATETELTGRERPEILALMTRNLEVMKESVQAGLSP EKSPTGLTGGDAAKLDAYIKKGNTLADSAVLGAARNAMAVNESNAKMGLVCATPTAGSAG CLPAVLTTAIQKLGLTESQQLDFLFTAGAFGLVIANNASISGAEGGCQAEVGSASAMAAA AITMAAGGTPFQASQAICFVLKNMLGLICDPVAGLVEVPCVKRNAMGASFALVAADMALA GITSAIPVDQVVDAMYQVGSAMPTAFRETAEGGLATTPKGKALAKEIFG >gi|311100538|gb|AEKO01000007.1| GENE 900 896438 - 897109 563 223 aa, chain - ## HITS:1 COG:SP0106 KEGG:ns NR:ns ## COG: SP0106 COG1760 # Protein_GI_number: 15900049 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Streptococcus pneumoniae TIGR4 # 1 222 1 222 223 364 81.0 1e-101 MKNLKFQSVFDIIGPVMVGPSSSHTAGAVRIGKIVSAIFGDIPTEVEFQLFNSFAKTYRG HGTDVALVAGILGMETDDPDIPRALDIAHEKGIKVYWKINKDSNAPHPNTTRITLKNATK TISATGVSIGGGNIQVTELNGFAVNLKMNTPTLIIVHQDVPGMIALVTDILSRYGINIAQ MTVTRENAGEKAIMIIEIDSHQCDEAVTDIARIPNLHNVNFFS >gi|311100538|gb|AEKO01000007.1| GENE 901 897389 - 898084 792 231 aa, chain + ## HITS:1 COG:SP1171 KEGG:ns NR:ns ## COG: SP1171 COG1011 # Protein_GI_number: 15901036 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 1 231 1 229 237 267 58.0 1e-71 MTYTHLLFDLDHTLLDFDRAEDMALNYLLEEAGVASQEIKAYKDHYIPMNRSMWEDLNHG LITKPELLRTRFSRLFEHFGKEVDGSHLAGRYQHFLSQQGQELPQAHAFLADVKDRGYNI YAATNGVSFIQRGRLQASSILPFFDDVFISDEVGAHKPSTDFFDKIANQVHDFHPSSALM IGDSLTADIQGGNNAGIDSVWFNPSNLVNETPAVPTYQVKSYEEILKILSK >gi|311100538|gb|AEKO01000007.1| GENE 902 898144 - 899928 1655 594 aa, chain + ## HITS:1 COG:SP0618 KEGG:ns NR:ns ## COG: SP0618 COG0322 # Protein_GI_number: 15900526 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Streptococcus pneumoniae TIGR4 # 1 591 1 589 614 925 76.0 0 MNDLIKHKLELLPNNPGCYLHKDKFGNIIYVGKAKNLKNRVRSYFRGSHDTKTELLVSEI ADFEFIVTESNIEALLLEINLIQENMPKFNIRLKDDKSYPFIKITKEIYPRLLITRQVKK DGGLYFGPYPDSGAANEIKKLLDRIFPFKKCKNPANKVCFYYHIGQCNAHTICHTTEDYW QGLVEDVKNFLNGHDDKIVNQLKAKMTDMSDQMEFERAAEYRDLIEAVSTLRTKQRVIRQ DMQDRDIFGYYVDKGWMCVQVFFVRQGKLIQRDVNMFPYYNDAEEDFLTYMGQFYLDSRH LKPKEIFIPGDIDQESVEALVGDGVKVFKPQRGEKRQLVNLATKNARVSLTQKFDLLEKD LAKTQGAIENLGKLMGIPTPVRIESFDNSNIMGTSPVSAMVVFENGKPNKKEYRKYKIKT VEGPDDYASMREVIRRRYSRVKRDGLTPPDLIIMDGGQGQVNVAKDVLRKELNLSIPVAG LQKNDKHQTNELLFGDPLRVIDLPRQSEEFFLLHRIQDEVHRFAITFHRQVRSKNSFSSK LDGVEGLGPKRKQKLLKYFKSMTAIQKATVEDIHALGIPEKVAEALLDKLNDNN >gi|311100538|gb|AEKO01000007.1| GENE 903 900292 - 900573 109 93 aa, chain + ## HITS:1 COG:pli0015 KEGG:ns NR:ns ## COG: pli0015 COG5655 # Protein_GI_number: 18450301 # Func_class: L Replication, recombination and repair # Function: Plasmid rolling circle replication initiator protein and truncated derivatives # Organism: Listeria innocua # 12 78 261 327 327 74 50.0 4e-14 MIVLPEETKERITGDLFEGLYRKRQIGFGKLFKTIKKELDLDDVEDGNLVQTGEDSQEVS RGQEIVAVWNWQRKNYFLQLLRNMLVSFIIRCI >gi|311100538|gb|AEKO01000007.1| GENE 904 900594 - 900866 238 90 aa, chain - ## HITS:1 COG:lin2165 KEGG:ns NR:ns ## COG: lin2165 COG1226 # Protein_GI_number: 16801231 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Listeria innocua # 7 85 103 181 247 66 40.0 1e-11 MKRLNTLFHIIKVTGFNQFLISFVSFIFISGGILLLVEPQISNYWDGLWYAFVTSTTVGY GDILATTLIGRITSVFLTVYGLIFLDAYQP >gi|311100538|gb|AEKO01000007.1| GENE 905 901692 - 903137 1217 481 aa, chain + ## HITS:1 COG:SPy1212 KEGG:ns NR:ns ## COG: SPy1212 COG1502 # Protein_GI_number: 15675176 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 2 481 45 525 525 608 59.0 1e-174 MSYLWLHQYRIHLQVTEVVLRILAIIYLFQSDMESTAVNTWLLIVLPFPIIGTLLLAYTK LDIGYTGMKRAIQSNIDRSSGILKQDNQALEELKQRHTSNYNLVQYLENVNASFPVYRHT KTTYFPSGEAKFEEMKKQLLKAEKYIFLEYFIIGEGEMWGEILAILKQKVQEGVEVRVLY DGMNEFSTLSFDYKKRLEKIGIQSRVFASVTPFLSTYYNYRDHRKILLIDGKVAFTGGVN LADEYINKIERFGHWKDTALMLEGPAVDTFLVLFLQMWTYSNETLDVTPYMVEHKVFDTP GFVVPYGDIPLDKDKVGENVYIDILNHARDFVHIMTPYLILDGELLHALKFAAERGVDVS IIMPGIPDKKSAYYLAKTYYPTLLASGVKIYEYTPGFVHAKVFVSDNSRAVVGTINLDYR SLYHHFECATYLYRTSSVVGIEEDFQATMAKCHRVSMTDVKNRPFHQKCLGLLTRLVAPL M >gi|311100538|gb|AEKO01000007.1| GENE 906 903218 - 903730 592 170 aa, chain + ## HITS:1 COG:L19745 KEGG:ns NR:ns ## COG: L19745 COG1247 # Protein_GI_number: 15673759 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Lactococcus lactis # 2 162 1 161 187 166 52.0 2e-41 MLTIRPASLSDAQAIQAIYTPYVEKTAFTFEYEVPSVQEFEKRICKTLEKYPYLVAEENG QVLGYAYASTYYARTAYDWTTELSIYVAKEARGQGIGSALYTALEEELQARGYLRFLACI AVPNEASISMHEKRGYVQVAHFPKIGYKFNKWHDIVWMQKTIDGPVRKIQ >gi|311100538|gb|AEKO01000007.1| GENE 907 904076 - 905434 1139 452 aa, chain + ## HITS:1 COG:SPy1212 KEGG:ns NR:ns ## COG: SPy1212 COG1502 # Protein_GI_number: 15675176 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 452 76 525 525 458 49.0 1e-129 MDSRSKLSWMIIIALFPIFGTALLYFSLADLGVRRLKKRLEDATVQASDHLSTNPEVADY LSQSDRQLQKLAYFLEHSPAQFPIYRNTEVTYFPLGDDMLPALLEDLKKAESYIFMEYFI IDEGIMWGEILTILEEKAKAGLDVRVMFDGMNEMTTLSYDYIERLHKVGIKAKAFSPVKP VLSTYYNYRDHRKITVIDGQVAYTGGVNIADEYVNKRERFGHWKDTALRLDGSAVQTLKA LFLTMWTVTGIEDKTDVEYYLQEKPQQRKSQGFVLPYGNSPLTYHKVAENVYLHLLNTST NYVYIMTPYLILDDELVRAMTFAARRGVDVRIIMPGIPDKQYAFDIATTYFKVLLDAGVR IFRYTPGFVHAKVYVSDAKQAVVGTINTDYRSLYQNFEDGIYLYKNLEVIKIEQDFEKTQ ALSEEVTLESLSKMPMAHRLGGYLFSLIGPLM >gi|311100538|gb|AEKO01000007.1| GENE 908 905450 - 906103 367 217 aa, chain + ## HITS:1 COG:Cgl0917 KEGG:ns NR:ns ## COG: Cgl0917 COG4912 # Protein_GI_number: 19552167 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Corynebacterium glutamicum # 10 215 14 206 208 162 44.0 4e-40 MDTNILLKLLEDQADSTKVPAMEAYMKNKFSFLGVQKPILKKIEREFFKPFIKDPIDWTF VEECWQQPYREFQYIAMDYLDKKKKELRPEDFPKLKELAQTKSWWDSIDQLDLIIGEVTF HYPETKNIMRQWSLDEDFWLRRIAIDHQLMRKDLTDTALLAEVICNNFGQTEFFINKAIG WSLRNYSKVNPDWVRAFIDQHASQMASLSIREASKYL >gi|311100538|gb|AEKO01000007.1| GENE 909 906398 - 907474 1378 358 aa, chain + ## HITS:1 COG:SP1013 KEGG:ns NR:ns ## COG: SP1013 COG0136 # Protein_GI_number: 15900885 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 358 1 358 358 657 93.0 0 MGYTVAVVGATGAVGAQMIKMLEESTLPIDNIRYLASARSAGKVLQFKGQDVTIEETTED AFEGVDIALFSAGGSTSAKYAPYAVKAGAVVVDNTSYFRQNPDVPLVVPEVNAHALDAHN GIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELKEVLNDGV NPRDVKAEILPCGGDKKHYPIAFNALAQIDVFTENDYTYEEMKMTNETKKIMEDDSIAVS ATCVRIPVLSAHSESVYIETKEVAPIDEVKAAIAEFPGAVLEDDVANQVYPQAVNAVGSR DTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERGLVRSTSELKFELK >gi|311100538|gb|AEKO01000007.1| GENE 910 907856 - 908791 1160 311 aa, chain + ## HITS:1 COG:SP1014 KEGG:ns NR:ns ## COG: SP1014 COG0329 # Protein_GI_number: 15900886 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 311 1 311 311 520 83.0 1e-147 MSIDQLRDVKLITALITPFHEDGSINYDALPELTEHLLAHHTEALLLAGTTAESPTLTHD EELELFAAVQKIVNGRVPLIAGVGTNDTRDSIEFAKEVAKFGGFAAGLAIVPYYNKPSQE GMYQHFKAIADASDLPIIIYNIPGRVVVEMAPDTMLRLAEHPNIIGVKECTSLANMAYLI EHKPEDFLVYTGEDGDAFHAMNLGANGVISVASHTNGDEMHAMLEAIENSDLKTAAAIQR KFIPKVNALFSVPSPAPVKAVLNHLGFEVGPLRLPLVACTSEEAKRIIKVVLEEDVEATR ETVTGVVRPDY >gi|311100538|gb|AEKO01000007.1| GENE 911 908948 - 909637 847 229 aa, chain + ## HITS:1 COG:SPy0531 KEGG:ns NR:ns ## COG: SPy0531 COG0571 # Protein_GI_number: 15674631 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 227 1 227 230 309 71.0 2e-84 MNQLEQKLEQDFGIVFNQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISV YLYKRYPNKPEGEMSKMRSTIVREESLAGFSKACGFEQYIRLGKGEEKSGGRERATILGD LWEAFLGALYLDQGLPAVEKFLNQVMIPQVEKGNFDRVTDYKTALQERLQVNGTVDITYT VIDESGPAHAKEFTMQVAVDGKELSTGLGKSKKLAEQAAAKAALEQLGN >gi|311100538|gb|AEKO01000007.1| GENE 912 909640 - 911223 1604 527 aa, chain + ## HITS:1 COG:SPy0532 KEGG:ns NR:ns ## COG: SPy0532 COG1196 # Protein_GI_number: 15674632 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Streptococcus pyogenes M1 GAS # 1 498 1 498 1179 471 58.0 1e-132 MYLKSIEMQGFKSFADKTQVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGK MPDVIFAGTEVRKALNYAEVAVTLDNSDGFIAGAGETIRVERHIYRNGDNDYLIEGRKVR LRDIHDLFMDTGLGRDSFSIISQGRVEAIFNAKPEERRAIFEEAAGVLKYKTRKKETESK LNQTQDNLDRLEDIIYELDGQVKPLEKQAATAKRYLELDEERRQTQLNLLVHDIEIGKSE LSQTQEDLAEVKEKLTSYYEERHHLETENQELKQKRHQISEQISSDQQTLVDVTRLISDF ERQIDLYTMESQQRSEKKEETASRLSELESLKAEAQASLDKVNQRKVKLDAELNTIAQEL TAIQKDLEQFTDDPDTLIERLREDYVGLMQEEAKVSNSLTQVTHDMDSQTQALEAQAEEF KQAQADLLSAQEVASETQKVYQVAKESLQSLLASYKEKAQVYQAIDKDYQEAQKQMFDLM DHLKSKDARRQSLESIQKIILISMQGLRLSFKMPSPFRELLVLSVNT >gi|311100538|gb|AEKO01000007.1| GENE 913 911262 - 913172 2129 636 aa, chain + ## HITS:1 COG:SP1247 KEGG:ns NR:ns ## COG: SP1247 COG1196 # Protein_GI_number: 15901108 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Streptococcus pneumoniae TIGR4 # 1 634 542 1175 1179 561 54.0 1e-159 MGASGQNIIVEDEGAAKRSIDYLKRNRQGRATFLPLTTIKPRQLNGQFAQSLANAPGFIG MASDLVTYEERLSNILQNLLGVTAIFDTIDNANKAARAVRFQVRMVTLDGSEIRPGGAFA GGTNKQNNNLFIKPELDALTAEINQIKVQLSDSEAKVEALKTKRKALQKELDDLKVDGEN ARLQEQKLDLEHQQALSEVEKNRTLVDSFKQDSQGTDGANLQDKAEQFKAELAQIASKRE AINDRIEAIKEDKDALGQQKQVLLDKQSELQLKERDLQAELRFAKTESNRLQADLSELMK ESDNLQALLNNQVNDDQTDRLPHLQAQHKEAVQRKDDLEQALVRAKIQLQDYEGQLEDLE ERLAKAGNRNEDLIRQQTRLEERESQISQSLRKFATQLAEDYQMTLEVAKGQACPLDNVD QTRQNLQGLERSIKALGPVNVDAIAQFEEVKQRLDFLNGQKDDLLEAKSLLLNTINDMDD EVKSRFKATFEAIRESFKQTFTQMFGGGSADLILTSDNLLEAGVEISVQPPGKKIQSLNL MSGGEKALSALALLFAIIRVKTIPFVILDEVEAALDEANVKRFGDYLNRFDKSSQFIVVT HRKGTMSAADSIYGVTMQESGVSKIVSVKLKDLDFD >gi|311100538|gb|AEKO01000007.1| GENE 914 913476 - 913712 122 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEIDRDWGPWTGSLLKGSLANSLMKTADESRSGKPDKKRMVPRVNAPGWSSGMWFFVCDS KLSHQKGISWIYKHNCKS >gi|311100538|gb|AEKO01000007.1| GENE 915 913682 - 914725 1314 347 aa, chain + ## HITS:1 COG:SPy0768 KEGG:ns NR:ns ## COG: SPy0768 COG0016 # Protein_GI_number: 15674814 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 346 27 372 373 620 87.0 1e-177 MDLQTQLQELKTSMQAKLAEMRGEHSKELQELRVAVLGKKGSLTDLLKGLKDLPNEERPK VGKMVNEVRDVLTEAFDEATKIVEAAKIQAQLDSESLDVTLPGRQVKLGNRHILSQTAEE IEDIFLGMGFQIVDGFEVETDYYNFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQA RTLDKHDFSKGPLKMISPGRVFRRDTDDATHSHQFHQIEGLVVGKNISMGDLKGTLEMII QKMFGAERQIRLRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKKTGWIEILGAGMVHPQVL EMSGVDSEEYSGFAFGLGQERIAMLRYGINDIRGFYQGDVRFSEQFK >gi|311100538|gb|AEKO01000007.1| GENE 916 914742 - 915260 459 172 aa, chain + ## HITS:1 COG:SP0580 KEGG:ns NR:ns ## COG: SP0580 COG0454 # Protein_GI_number: 15900490 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 4 172 1 168 169 177 59.0 9e-45 MSVVIRKVLPEEVAELKVISEDTFRETFAHDNTEAQLQDYFDTTLSEEVLLDEITHEESR YFFILVDGEKAGFLKTNVGSAQTEQHLDNAFEIQRIYISQAFQGMGLGKQLFEFALQEAR DLGCDWAWLGVWERNFKAQIFYDKYGFEKFSEHDFPVGDGKVDCDWLLKLKL >gi|311100538|gb|AEKO01000007.1| GENE 917 915489 - 917897 2736 802 aa, chain + ## HITS:1 COG:SPy0769_2 KEGG:ns NR:ns ## COG: SPy0769_2 COG0072 # Protein_GI_number: 15674815 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Streptococcus pyogenes M1 GAS # 146 802 1 657 657 1003 78.0 0 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHVLTCEDVPETH LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKIKKGKIRGMESLGMIC SLAELGLPDNIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMRG VAHEVAAIYGKSVHFPEKTVTEDSKPASDKISVAIESDKVATYASRVVENVTVQPSPQWL QNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEDSRIVARDAREGEKLVTLDGE ERELTTEDIVITVADKPVALAGVMGGASTEIDNNSKNVVLEAAVFDGKSVRKTSSRLNLR SESSSRFEKGINNDTVLEALDFAAAMLQELANGTVLAGRVQAGSVDTEPVQVSTSLDYVN VRLGTALTFADIEDVFAKLGFGLTGDADKFTVSVPRRRWDISIQADLVEEIARIYGYEKL PTTLPEAAGTAGELTETQVLRRKVRTIAEGAGLTEIISYALTTPEKAVEFAVTPSNLTEL MWPMTVDRSALRQNMVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQKGNPKEELPNEINTF AFAISGLVAEKDFQTKATPVDFFYAKGIVEALFDKLEVSVDYVATKDLASMHPGRTAAIV LDGQTIGFLGQVHPQTAKNYGIPETYVAEINLSAVEAALQPDQPFVEITKFPAVSRDIAL LLKAEITHQEVLDAIYFAGVKRLVAVKLFDVYAGEKLGAGMKSMAYSLTFQNPNDNLTDE EVAKYMEKITKALTEKVKAEVR >gi|311100538|gb|AEKO01000007.1| GENE 918 918137 - 918547 255 136 aa, chain + ## HITS:1 COG:no KEGG:str1290 NR:ns ## KEGG: str1290 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 34 136 1 101 101 146 72.0 2e-34 MSPQDIWAWQKEKFCQSKLSFIVIPIVYLFIFGMTYVLGGGFLATVTIYKDYGGPIAKSI DGKVEQIDISHVGSKTSSARINAHFESSDGQTYDIHLINGDKRIANHIRHNQSMSYPSTL SFDRHGKPLYIAKFWE >gi|311100538|gb|AEKO01000007.1| GENE 919 918638 - 918976 455 112 aa, chain + ## HITS:1 COG:L70400 KEGG:ns NR:ns ## COG: L70400 COG1328 # Protein_GI_number: 15672255 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Lactococcus lactis # 1 100 15 111 747 68 39.0 4e-12 MQIIKRNGQVAEFDPDKIYQAILKAAQTVYVIDDAWRQNLAQVTRKVVLDLQDAQVERPT INMIQSLVENRLMEAGFINIAEHYISYRLQRDLERNGYGDKVIVHLRFEQTK >gi|311100538|gb|AEKO01000007.1| GENE 920 919020 - 920285 881 421 aa, chain - ## HITS:1 COG:SPy1210 KEGG:ns NR:ns ## COG: SPy1210 COG1167 # Protein_GI_number: 15675174 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Streptococcus pyogenes M1 GAS # 4 403 5 404 422 385 53.0 1e-107 MSIYQEIVETITKDIQNGKLEKGSKLPSIRQLSQTYGCSKDTAQRALLELKYQNYIYAVP KSGYYVLEGPSKSNDKVLFNLNDYNQLAYEDFRLCLDESLAGHQDYLFNYYHEQAGLKEL VEALKNRLASDDIYVNSNQIVITSGSQQALYILSQMDFGNGAHKILLEQPTYHRMNQLVN RQNLSYETINRGFDGLDFDRLEEYFKSGQFKFFYTISRYSNPLGLSYTASEKEKLAQLAK QYNVYIVEDDYMGDFSDSKNLPIHYYDTQNQTIYIKSFSMALFPGLRLGSVVLPPNLRAT FLAHKGLIDYDTNLIMQKALSVYLDNGMFQKNIKKLRDLFQETMAKSHETIEQAKVSIPY QISPRHITWKLPKGLSLENFKAQKQIRFLETSFIRPSSETYMQIGHGKELKTFLKLLKMT D >gi|311100538|gb|AEKO01000007.1| GENE 921 920445 - 920975 674 176 aa, chain + ## HITS:1 COG:no KEGG:STER_1263 NR:ns ## KEGG: STER_1263 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 176 1 176 176 290 91.0 1e-77 MTFKKVLGLIALACLTIIGLSACTPDKETTWTYDKNKMQFVGQDASVQVLSATKIESPEG QKAVRVHYKLSNSSKETMNAYTLLMKVVLDVKQEKEELKVATMVFSKDDDRDKIANKTKI APKEVKEIVVDYAVADFDHDLNIDFSDYGTEANATAKLSLQNLEKAPVKYFDKKAQ >gi|311100538|gb|AEKO01000007.1| GENE 922 921114 - 921623 669 169 aa, chain + ## HITS:1 COG:no KEGG:str1285 NR:ns ## KEGG: str1285 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 169 1 169 169 248 87.0 8e-65 MSAKRLTISAFFMALVIILSSSLLSIPVPGGHFYFNGIIIFLVGLIFPPTEAVIIAGVGS FIGDFLFYPLPMWVTLVTHSLQVLAIALIVGGRLGKLSKSKAALGLLIGAIIDLVGYGLG RAFIYGTPAYAIMKIPFDIVAAILGLGVAYYIYFHTGFVKQFKKTWEGK >gi|311100538|gb|AEKO01000007.1| GENE 923 921624 - 922481 752 285 aa, chain + ## HITS:1 COG:SPy1209 KEGG:ns NR:ns ## COG: SPy1209 COG2240 # Protein_GI_number: 15675173 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 283 1 282 288 252 42.0 5e-67 MTKVIVANDLVGLGKVALTSSLPIMSACQTEVLPLPTVLLSSHTGEFENIYVRDLTDDLK GFCKQWEHLEFKVDGLVSGYFKSEEALKRVAQLARDKQIALFVDPIMGDNGCLYQGFDRN YVEAMKAFCQQADVIIPNLTEAALLTDTPYLEAGSYDKVTVEKLLRDLSKIGPRKVILTG ISFETDKIGLAYFDKETNRTIYRMQKRYRYHFYGSGDLLTAIISAGYFYDLDLLKVCDLA LDVMDRVLSSTLFDSRPLKYGLCYEPHIGLLFSGFNALLEEKNEK >gi|311100538|gb|AEKO01000007.1| GENE 924 922471 - 923001 447 176 aa, chain + ## HITS:1 COG:SPy1208 KEGG:ns NR:ns ## COG: SPy1208 COG4720 # Protein_GI_number: 15675172 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 175 1 175 185 170 57.0 1e-42 MKSDKTRELVELSLYAALIIVSVQFIRIPFGPQFVHLGNALVVIAVLIFGARKGALVATV GLGLFDIFNGYAAEVWITILESLIVCYVLYLVFEKLLKSNDKMTNIIIIGVIAAVTKIIL NFVKYTIINSVVAALPLNAAMVLALTKIGGTFGTSVVTIIAVPLLYPVFKRILKKD >gi|311100538|gb|AEKO01000007.1| GENE 925 923140 - 924678 1483 512 aa, chain + ## HITS:1 COG:SP0770 KEGG:ns NR:ns ## COG: SP0770 COG0488 # Protein_GI_number: 15900664 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 511 1 512 513 903 87.0 0 MSILEVKNLSHGFGDRAIFENVSFRLLKGEHIGLVGANGEGKSTFMSIVTGKLQPDEGKV EWSKYVTAGYLDQHAVLEKGMTVRDVLRTAFDELFKTEERINEIYMSMAEEGADVDALME EVGELQDRLETRDFYTLDAKIDEVARALGVMDFGMDTDVTDLSGGQRTKILLAKLLLEKP DILLLDEPTNYLDAEHIAWLKRYLQEYENAFVLISHDIPFLNDVINIVYHVENQDLVRYA GDYDNFQSVYAMKKAQLEAAYERQQKEIADLQDFVNRNKARVATRNMAMSRQKKLDKMEI IELQAEKPKPEFHFKESRTPGRFIFQTKDLVIGYDRPLTKAPLNLTFERNQKVAIVGANG IGKTTLLKSLLGIIQPLEGEVETGDFIDLGYFEQEAEGSRQTPLEAVWDAFPALNQAEVR AALAKCGLTSKHIESQIQVLSGGEQAKVRFCLLMNRENNVLVLDEPTNHLDVDAKDELKR ALQAFKGSVLMVCHEPEFYEGWTDVWDFNELV >gi|311100538|gb|AEKO01000007.1| GENE 926 924994 - 926367 1662 457 aa, chain + ## HITS:1 COG:SPy1150 KEGG:ns NR:ns ## COG: SPy1150 COG0446 # Protein_GI_number: 15675127 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 1 457 1 455 456 688 76.0 0 MSKIVVVGANHAGTFSINTILDNYGDQNEVVVFDQNSNISFLGCGMALWIGNQISGSDGL FYANKEGLESKGAKVYMNSPVESIDFDGKTVTALVDGKEHVESYDKLILATGSQPILPPI DGAEIKEGSRTFEATLENLQFVKLFQNAQEVIDKLNDKSQDIKRVAVVGAGYIGVELAEA FQRHGKEVILIDVVDTCLAGYYDRDFTDRMAKNMEDHGIQLAFGETVKAVEGETKVERIV TDKNAYDVDMVVLAVGFRPNTALGAGKLETFRNGAYLVNKKQETSVKDVYAVGDCATVYD NALDDVNYIALASNAVRSGIVGGHNVGGGDVESNGVQGSNGISIYGLNMVSTGLTEEKAK RFGFNPAVVESTDLQKAAFMEDENDDVTIKIVYDKDTRKVLGAQMVSRMDISMGIHMFSL AIQEGVTIDRLQLLDLFFLPHFNQPLSYIAKAAISAE >gi|311100538|gb|AEKO01000007.1| GENE 927 926460 - 927446 1238 328 aa, chain - ## HITS:1 COG:SP1220 KEGG:ns NR:ns ## COG: SP1220 COG0039 # Protein_GI_number: 15901082 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 328 1 328 328 608 96.0 1e-174 MTATKQHKKVILVGDGAVGSSYAFALVNQGIAQELGIIEIPQLFEKAVGDALDLSHALAF TSPKKIYAAKYEDCADADLVVITAGAPQKPGETRLDLVGKNLAINKSIVTQVVESGFKGI FLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALAEKLDVDARSVHAYIMGE HGDSEFAVWSHANIAGVNLEEFLKDKENVQEAELVELFEGVRDAAYTIINKKGATYYGIA VALARITKAILDDENAVLPLSVFQEGQYGVSNVFIGQPAIVGAHGIVRPVNIPLNDAEQQ KMKASADELQAIIDEAWKNPEFQEASKN >gi|311100538|gb|AEKO01000007.1| GENE 928 927667 - 930135 2522 822 aa, chain + ## HITS:1 COG:SP1219 KEGG:ns NR:ns ## COG: SP1219 COG0188 # Protein_GI_number: 15901081 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 821 1 821 822 1291 81.0 0 MQDNNLIDVNLTSEMKTSFIDYAMSVIVSRALPDVRDGLKPVQRRILYGMNELGVTPDKP HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDGAAAQRY TEARMSKIALEMLRDLNKNTVDFQDNYDGSEREPIVLPSRIPNLLVNGATGIAVGMATNI PPHNLAETIDAVELMMDNPEVTTRELMEVLPGPDFPTGGLVMGRSGIHRAYETGKGSIVL RSRTEIETTKSGRERIVVTEFPYMVNKTKVHEHIVRLAQEKRIEGITAVRDESSREGVRF IIEVRRDASANVILNNLFKLTQLQTNFSFNMLAIEKGVPKILSLRQILADYIAHQQEVVV RRTQFDKDKAEARAHILEGLLIALDHLDEVITIIRNSQTDAEAQAELMARFELTERQSQA ILDMRLRRLTGLERDKIQNEYNDLLALIADLADILAKPERVIAIIKEELDESKRKFADAR RTELMVGEVVSLEDEDLIEEEDVVITLSSKGYIKRLAQDEFRSQKRGGRGVQGTGVNDDD FVRDIVSTSTHDHLYFMTNKGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDEGETIQTVIN AKSDEASDNNHLVFVTRQGLVKRTKEAEFKNIRQNGLIALKLREGDELINVFLTTGNEEI IIGTKFGYSVRFKEDTIRSMSRMAAGVKGVTLRDGDQVVGAAAITEDQEVLIVTEKGYGK RTSATEYPTKGRGGKGIKTANITDKNGNLAGIVTVSGDEDIMVITDTGVIIRTAVANISQ TGRATQGVKVMRLDDTARIVTFALVEPEEVDQVTEDQESGDN >gi|311100538|gb|AEKO01000007.1| GENE 929 930135 - 930896 670 253 aa, chain + ## HITS:1 COG:SPy1154 KEGG:ns NR:ns ## COG: SPy1154 COG3764 # Protein_GI_number: 15675130 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 11 253 4 249 249 314 67.0 1e-85 MRKDNKNKTPKKHRKWLEVLRWILIVVLLVVGLALIFNKSIRNTVIAWNTNKYQVSKVSK KTIEKNKEAEASYDFDTVKSVSTESVLQAQIGAQELPVVGGIAIPEVGINLPIFKGLGNT ELTYGAGTMKENQVMGGENNYSLASHHVFGIAGASDMLFSPLDKAKEGMKIYLTDKNKVY TYVISEVKIVQPTEVAVVDDTPGKSEVTLVTCTDAEATQRTIVKGELKSQVDFDKASSDI IEAFNKSYNQFQS >gi|311100538|gb|AEKO01000007.1| GENE 930 930921 - 931334 333 137 aa, chain + ## HITS:1 COG:SPy1155 KEGG:ns NR:ns ## COG: SPy1155 COG0346 # Protein_GI_number: 15675131 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Streptococcus pyogenes M1 GAS # 5 137 1 137 137 193 72.0 7e-50 MEGKMFLKTIHHVAIIVSDYDSSRDFYVNKLGFEIIRENYRPERHDYKLDLSCGDIELEI FGNKTSDLAYVEPPKRLSYPEACGLRHLAFKVANIEEVVKSLEEKGISCQPIRKDSFTGE KMTFFTDPDGLPLELHE >gi|311100538|gb|AEKO01000007.1| GENE 931 931448 - 932416 896 322 aa, chain + ## HITS:1 COG:SP1027 KEGG:ns NR:ns ## COG: SP1027 COG4086 # Protein_GI_number: 15900898 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Streptococcus pneumoniae TIGR4 # 4 317 3 319 324 313 61.0 2e-85 MKLKKLLVTGMALLASVTAFTSVAQAATSSQVQKVIDESYVQPDYVMGYSLSEGQRNETL NLLGYDSSKDTNVKTLTTSAYANIMNVADDSSLQLYSSVKIAKLGAKETLSVEIVTPQNI TKITPDMYRNAATTLGIEHAKITVAAPIPVTGESALAGIYYSLEQNGAKVSDESKELAQE ELKTLSQINEENSGKSNYDADKLNVAMTDIKAAVADKGNKLTEDQAKTIVQQTINNYNLN LSDTQINLLVNFALNLSKSSIIDSASFKSSLSSLKDSIVSKAGNTFSGINLNFNANKAVE NSKNIFSKIWQAIVDFFTGLSK >gi|311100538|gb|AEKO01000007.1| GENE 932 932619 - 932807 115 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKLYLIAFTLRYYISKLMLKQFSEQFYSNTLDLSRVMSHMRVQIINQFEREPHGYKTIK RY >gi|311100538|gb|AEKO01000007.1| GENE 933 933564 - 935048 843 494 aa, chain - ## HITS:1 COG:no KEGG:spr1404 NR:ns ## KEGG: spr1404 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_R6 # Pathway: not_defined # 1 494 9 502 502 844 90.0 0 MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLECTERILKSDLNELRLAFPDIDIQF SANGIMIDLALNTSVEDVYQYFLAHSQSFQLLEYLFFNEGLPIYRTIENLHSSNANLYRL GRNITKTLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSERYYFLDWPFPDLPEEDLTEF ADFFYKITNYPMTFSIYRMYKLMLAISIHRIKNGHFIDLPNHFYDEYYPILESIPNFEEI LVHFSEKLGLEITPDIIAQIFISFIQNNLFLDPQEFFNSLEENSEARYSYQLLSQILERL SKQYKITFTNHDELIWHLHNTALFERQEIFSTPILFEQKALTIQKFEVYFPDFMESARQE LAQYRQAIGQHDHPEQLEHLMYTILTHAEHLSTQLLENRPPIKVLIISNFDHAISLTFVD MLSYYCNNRFTFDIWDELETSPEILNQTDYDVIVSNFYIPDITKKFICQNHLSIMDLVNH LNTLSNEIHLSNTL >gi|311100538|gb|AEKO01000007.1| GENE 934 935266 - 941733 8054 2155 aa, chain + ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 1431 1955 1995 2520 2712 72 28.0 1e-11 MKHSHKKSFDWYSMHQRYSIRKYHFGAASVLLGTALVLGTAANAQAVQAEEQNPEVTNIV SVDKVEEATKPAEVSTPKKETTYAAPTVAHPVETTPAKTEEATKLAEVSTPKKETTYTAP TVAHPVETTPVKTEEATKPAEKVEEAKDKSANIGLESRSNSDKGTVLETPVGKKADVVEA KEESKPAATTSDRSAVDSAVLPTSTTAKVEATNEILKPGLSLSDARQNPAIRKEDLDKGH SGFRASSNPANPIVSGSGNTVAFTDISQGGRSYSFRGYGNSRGGNSIHYDVTTVRQGNKL NFTIDYSGPGEFVNNNFILDKGDGFGNPSNATITTPRLREQTRPVSQGGNFVSHSGYSMT SATSTSEKQTIRFSLPIINPNGDLSVRLKPVTFNVDQGGGSAATSNDPYSNSNYYYRANP LYLDANPYGGTNNKTVSEDIDFQTVYLPTSKLLEGQTRLVREGEKGQRQITYKVHRFGNE TILGLPISNSVTKEAKPRIMQIGVAKELIDTVKPRVDQNKVGDTNNLTFYLDNDGNGVYT EGVDELVQKIAIKDGAKGEKGDQGERGLTGAKGEKGDRGERGLTGAKGEKGDQGERGLTG AKGEKGDQGERGLTGAKGEKGDQGERGLTGAKGEKGDRGERGLTGAKGEKGDRGERGLTG AKGEKGDQGERGLTGAKGEKGDRGERGLTGAQGSAGRDGVTPTVTVKDNKNDGTHTITIN DGRGNVTSTVVRDGFDGASPLVATQRNEADKTTTVIFYYDQNGNNELDASDKKLKEVVIA DGAKGEKGDQGERGLTGAQGEKGERGDRGETGAAGRDGKTPKITTARGADGRSTDITFTI PGEEPVTVNVKDGKDGRTPNIDLNALAEAAVRLNNQRSGRVRRSLSDTPAPTEKPKVIGT RITAYFDNNGNGKYDPGVDEPISSADILNGTDGANGAAGAAGADGRNGAELLSGPKAPTA DDGKDGDTYIDATTGDVYKKENGTWDKIGNIRGPQGLKGEAGVAGPQGPQGPKGDKGAQG LQGERGQDGAQGLPGRDGRDGAQGPAGRDGRDGKDVLNGKVNPDATQGKDGDKYVNTETG DVFVKNNGNWDKEGNIKGPKGDKGERGEDGKTPEVTVTPGKDGHSTDITFTVPGKDPVTV NVKDGENGLNGKTPKVDLLRVEGQNGNPSHTIVTFYTDENNDGKYTPGTDELLGSEMIKD GAKGADGRDGKSLLTVKDGKETKVYQEDPAHPGQPLNPEKPLAVIKDGVDGVSPTVTAVR KDEDGHKGVEITVDNHDGSQPTTVFVKDGAKGETGATGQDGQTPTITTQRGQDGQSTLVT ITTPGKDPVTFTVKDGKNGKDGRTPTIDLNALVEAVRRGAGSTSNSQPSGTSRSARNRRA LPDEDRSATESSETVQPTTTDATDSQPVNGTRITAYYDNNGNGKYDPGVDELIGTSDILN GTNGRNGTDGASGTNGRNGAELLSGVTAPTANDGKDGDTYIDANTGDVYKKENGSWNKIG NIRGPQGVAGEKGDKGEKGEKGENGANGADGKSPVVNVTDNGDGTHSITVRNPDGSESTT KVKDGKDGKTANITTTENPDGSHTITVTNPDGTTKETVVKNGKDGKTPKVEVTDNNDGTH TVKVTDGDGNVTNAIIKDGKDGKAATATTTENPDGSHRVTITNPDGTKNEFVVKNGRDGV DGRTPTASVRDNGDGSHTIVITNPEGVTTETTVRDGKSPKVTITDEQNGTHKISVLNGDG TTTETIIKDGKSPVATVTDNHDGTYTIRVENGNGTVSETTVRDGKSPTAKVVDNGDGTHT ITVVNSDGTTTTTTVRDGKEPKLEVIDNNNGSHTIKVTGADGKETTTTIFDGKSPKANIV DNGDGTHTLTIIDSDGRQYKSIIKDGKDGKDGVSPTVTVKNNNDGTHVVTIINPDGSKTE MVIKDGKDGKSPKVSVEDNGNGSHTITIINSDGTVTKTVVKDGKDGRDGRDGKDGKDGKC GCQDKPVTPSNDKPVPPTRNVPERPTFAMPEPPVHELPEFNGGVPGMPEVNELPEFNGGV PGMPEVTEVPELDIPTVPVQPTPNVPTPEVPVQPTPVVPTPEVPVQPVPVVPEQPVVPTS AQPASPVNANPEVPTTVKENHGDKLPETGSQSDYIFVLLGSGILLSLYVGRRKED >gi|311100538|gb|AEKO01000007.1| GENE 935 941734 - 941928 137 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLAFRHPLQLTKSRFFCLTFGVQFTNPMGFVQSFPSYENRSKNILSFDIYHLSSSFEKLA TAFR >gi|311100538|gb|AEKO01000007.1| GENE 936 941922 - 942719 433 265 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 264 158 421 422 318 63.0 5e-87 MSWDEFGFKKGALAFIAQNYETNELITILDNRRQTTIRNHFLKYPLKVRRKVQFITMDMS GAYIPLAHRLFPNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQ KDSRKLSLNSFYSKTFRQTLAPHEVVEKTLNFSEELANYYNLYQLLLFHFQEKRVDEFFE LIEENMSKVNHYFQTVFRTFIRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFGFRNF INFKKRVFITLNIKKEKTYQVLSRC Prediction of potential genes in microbial genomes Time: Sun May 29 18:51:43 2011 Seq name: gi|311100503|gb|AEKO01000008.1| Streptococcus vestibularis F0396 ctg1126932565716, whole genome shotgun sequence Length of sequence - 41626 bp Number of predicted genes - 35, with homology - 35 Number of transcription units - 16, operones - 9 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 2/0.200 - CDS 2 - 212 94 ## COG3464 Transposase and inactivated derivatives - Prom 253 - 312 2.7 2 2 Tu 1 . - CDS 319 - 1185 291 ## COG3464 Transposase and inactivated derivatives - Prom 1417 - 1476 4.8 + Prom 1314 - 1373 6.4 3 3 Op 1 2/0.200 + CDS 1397 - 2572 1494 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 4 3 Op 2 2/0.200 + CDS 2559 - 3332 508 ## COG1381 Recombinational DNA repair protein (RecF pathway) + Term 3339 - 3385 5.2 + Prom 3367 - 3426 6.3 5 4 Op 1 . + CDS 3508 - 4512 1138 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 6 4 Op 2 . + CDS 4512 - 4757 311 ## stu0029 acyl carrier protein + Term 4936 - 4983 -0.8 + Prom 4954 - 5013 5.8 7 5 Op 1 2/0.200 + CDS 5040 - 5747 793 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 8 5 Op 2 10/0.000 + CDS 5803 - 9528 4402 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Prom 9575 - 9634 2.9 9 5 Op 3 13/0.000 + CDS 9697 - 11136 1710 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase + Term 11267 - 11326 10.1 + Prom 11255 - 11314 2.3 10 6 Op 1 21/0.000 + CDS 11348 - 12370 852 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase + Term 12466 - 12514 2.5 11 6 Op 2 10/0.000 + CDS 12555 - 13103 570 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 12 6 Op 3 . + CDS 13179 - 14726 1766 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 14738 - 14769 1.1 - Term 14875 - 14910 2.8 13 7 Tu 1 . - CDS 14918 - 15757 907 ## COG3942 Surface antigen - Prom 15950 - 16009 4.1 + Prom 15914 - 15973 6.4 14 8 Tu 1 2/0.200 + CDS 16065 - 17327 1387 ## COG0151 Phosphoribosylamine-glycine ligase + Term 17431 - 17464 1.8 15 9 Op 1 29/0.000 + CDS 17536 - 18024 733 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 16 9 Op 2 . + CDS 18011 - 19102 1175 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 17 9 Op 3 . + CDS 19103 - 20053 622 ## COG1893 Ketopantoate reductase 18 9 Op 4 . + CDS 20063 - 20311 389 ## SPP_0120 hypothetical protein 19 9 Op 5 . + CDS 20301 - 22106 781 ## EC55989_3921 hypothetical protein 20 9 Op 6 . + CDS 22130 - 22897 230 ## CLI_0774 hypothetical protein 21 9 Op 7 . + CDS 22924 - 24222 1558 ## COG0015 Adenylosuccinate lyase + Term 24244 - 24270 0.3 - Term 24933 - 24969 -0.1 22 10 Tu 1 . - CDS 25100 - 26791 1974 ## COG0018 Arginyl-tRNA synthetase - Prom 26885 - 26944 5.3 + Prom 26863 - 26922 9.5 23 11 Op 1 1/0.400 + CDS 26949 - 27374 483 ## COG1438 Arginine repressor 24 11 Op 2 3/0.200 + CDS 27374 - 27733 457 ## COG4550 Predicted membrane protein 25 11 Op 3 . + CDS 27726 - 30284 2975 ## COG0249 Mismatch repair ATPase (MutS family) + Term 30287 - 30322 5.1 - Term 30275 - 30310 1.3 26 12 Op 1 . - CDS 30318 - 30773 337 ## STER_0069 hypothetical protein 27 12 Op 2 . - CDS 30770 - 31207 293 ## COG3279 Response regulator of the LytR/AlgR family - Prom 31253 - 31312 2.7 + Prom 31304 - 31363 7.9 28 13 Op 1 . + CDS 31398 - 31691 137 ## str0053 hypothetical protein 29 13 Op 2 . + CDS 31741 - 33678 2212 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) + Prom 33723 - 33782 4.3 30 14 Tu 1 . + CDS 33809 - 34030 275 ## STER_0073 hypothetical protein + Term 34045 - 34078 2.4 + Prom 34087 - 34146 4.6 31 15 Op 1 2/0.200 + CDS 34188 - 34778 666 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 32 15 Op 2 1/0.400 + CDS 34787 - 35359 403 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) + Term 35374 - 35410 0.1 33 15 Op 3 5/0.000 + CDS 35438 - 36709 204 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 34 15 Op 4 1/0.400 + CDS 36745 - 37884 1421 ## COG0468 RecA/RadA recombinase + Prom 37975 - 38034 1.9 35 16 Tu 1 . + CDS 38061 - 38459 402 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Term 38481 - 38524 4.6 + SSU_RRNA 38878 - 40412 99.0 # AY188352 [D:1..1546] # 16S ribosomal RNA # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 40474 - 40546 84.6 # Ala TGC 0 0 Predicted protein(s) >gi|311100503|gb|AEKO01000008.1| GENE 1 2 - 212 94 70 aa, chain - ## HITS:1 COG:SP1582 KEGG:ns NR:ns ## COG: SP1582 COG3464 # Protein_GI_number: 15901424 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 3 70 331 398 418 70 58.0 5e-13 MIFFELIEENISKANHYFKTVFRTFLKHKQYIKNALETDYPNSKLEATNKLIKEHQTLGF GFRNFINFKK >gi|311100503|gb|AEKO01000008.1| GENE 2 319 - 1185 291 288 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 285 1 293 422 326 59.0 4e-89 MRLIKNTTELIGIKDQNIKISLVFETNTHIEIQAKLDYPAPSCPHCHGMMIKYDFQKHSK IPLLEQAGTPTLLRLKKRRFQCKNCRRVTVAKTSIVEKNCQISNLVRQKVVQLLTEKVSL TDIARRLRVSTSTVIRKLDQFTFKEHFDKLPRVMSWDEFGFKKSELAFVAQNYETNKLIT ILDNRRQTTIRNHFLKYPLKVRQKVQFITMDMSGAYIPLARRLFPNAEIIIDRFHIIQHL SRAFLKTRIAIMNQFDKKSLPYRALKNHWRLSRKLSCKSFHSKTFVKP >gi|311100503|gb|AEKO01000008.1| GENE 3 1397 - 2572 1494 391 aa, chain + ## HITS:1 COG:SP0035 KEGG:ns NR:ns ## COG: SP0035 COG0436 # Protein_GI_number: 15899981 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 387 1 388 389 599 77.0 1e-171 MDLTQRFNKNLDKIEVSMIRQFDQSISDVPGIKKLTLGEPDFTTPDHVKEAAKTAIDANQ SHYTGMAGLPDLRQAAANFVKEKYNLTYNPDNEILVTIGATEALSATLTAILEPGDTILL PAPAYPGYEPIANLVGAEIVEIDTTANDFILTPEMLEKAILEQGNKLKAVLLNYPTNPTG VTYSRQQIEDFAEVLKKYDIFVVSDEVYSELTYVDQHVSIAEYLPEQTILINGLSKSHAM TGWRIGLIFAPASLTAQLIKSHQYLVTAAATMAQFAAIEALSAGKDDAQPMKVEYLKRRD YILEKMTELGFKIIKPDGAFYIFAKIPEGYNQDSFKFCQDFAREKAIAIIPGVAFGKYGE GYVRLSYAASMDTIETAMTRLKEFMEEHAEA >gi|311100503|gb|AEKO01000008.1| GENE 4 2559 - 3332 508 257 aa, chain + ## HITS:1 COG:SP0036 KEGG:ns NR:ns ## COG: SP0036 COG1381 # Protein_GI_number: 15899982 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Streptococcus pneumoniae TIGR4 # 1 253 2 254 256 344 62.0 9e-95 MQKLESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGSGKLSAVIQPLNIAEFMMT VNDEGLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDAAIADGVVDAQLFAFLERTLE LMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGLPFDFSYKFSGLLCPNHYEED ERRSHLDPNVPYLLDRFQGLSFEELRSISVKDDMKRRLRQFIDELYDNYVGIHLKSKKFI DNLNSWGHIMSKEDSAD >gi|311100503|gb|AEKO01000008.1| GENE 5 3508 - 4512 1138 334 aa, chain + ## HITS:1 COG:SP0037 KEGG:ns NR:ns ## COG: SP0037 COG0416 # Protein_GI_number: 15899983 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 327 1 327 330 466 75.0 1e-131 MHVIAVDAMGGDNAPQAIVEGVNQALAEFKDIEIQLYGDEAKIKNYLTANERVSIVHTDE KINSDDEPVKAIRKKKKASMVLGAQAVKDKAADAVISAGNTGALLAAGLFVVGRIKGVER PGLMSTMPSFTGQPFDMLDLGANAENTANHLHQYAILGSFYAKNVRGIANPRVGLLNNGT EKTKGDSLRKEAFELLSKESSINFVGNVEAREIMSGAADVVVADGFTGNAVLKAIEGTGL GIMKTLKSAIMNGGLKAKLGAFLLKDRLKGMKETMDYSSAGGAVLFGLKAPVVKCHGSSD AKAVYYTIKQVRTMLDTKVVEQLVDAFDPKEEAN >gi|311100503|gb|AEKO01000008.1| GENE 6 4512 - 4757 311 81 aa, chain + ## HITS:1 COG:no KEGG:stu0029 NR:ns ## KEGG: stu0029 # Name: acpP1 # Def: acyl carrier protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 81 1 81 81 99 93.0 4e-20 MSRVEILQKMELVIQEQLGREDIVLTEATKLDDLGVDSIELMEFIINLEDEFALEISDNT IDHMDKVSDLLDYLSEQLNNK >gi|311100503|gb|AEKO01000008.1| GENE 7 5040 - 5747 793 235 aa, chain + ## HITS:1 COG:SP0044 KEGG:ns NR:ns ## COG: SP0044 COG0152 # Protein_GI_number: 15899989 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 235 1 235 235 384 84.0 1e-107 MSNQLIYTGKAKDIYNTEDENVIKSVYKDQATMLNGARKETIKGKGVLNNQISSLIFEKL NAAGVATHFIERISDTEQLNKKVTIIPLEVVLRNVTAGSFSKRFGVEEGLELKTPIVEFY YKNDDLDDPFINDEHVKFLDIANDEQIAYIKEETRRINELLKDWFAQIGLRLIDFKLEFG FDKDGKIILADEFSPDNCRLWDAEGNHMDKDVFRRDLGSLTDVYEVVLEKLQSLK >gi|311100503|gb|AEKO01000008.1| GENE 8 5803 - 9528 4402 1241 aa, chain + ## HITS:1 COG:SP0045_1 KEGG:ns NR:ns ## COG: SP0045_1 COG0046 # Protein_GI_number: 15899990 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Streptococcus pneumoniae TIGR4 # 1 948 1 948 948 1706 93.0 0 MDKRIFVEKKADFRVKSHSLVKELKHNLQLKTLNDLRIVQVYDVFNLAEDLFARAEKHIF SEQVTDTVLDEAAVKADLEKYAFFAIESLPGQFDQRAASSQEALLLLGSSNDVTVNTAQL YLVNKDIDANELEAVKNYLLNPVDSRFKDITVGIAKQDFSESDKTIPSLDFFETYTAEDF AKYKAEQGLAMEVDDLLFIQDYFKSIGRVPTETELKVLDTYWSDHCRHTTFETELKNIDF SASKFEKQLQATYDKYIAMRDELGRTEKPQTLMDMATIFGRYERANGRLDDMEVSDEINA CSVEIEVDVDGVKEPWLLMFKNETHNHPTEIEPFGGAATCIGGAIRDPLSGRSYVYQAMR ISGAGDITTPIAETRAGKLPQQVISKTAAHGYSSYGNQIGLATTYVREYFHPGFVAKRME LGAVVGAAPKENVVREKPEAGDVIILLGGKTGRDGVGGATGSSKVQTVESVETAGAEVQK GNAIEERKIQRLFRNGEVTRLIKKSNDFGAGGVCVAIGELADGLEIDLDKVPLKYQGLNG TEIAISESQERMAVVVRPEDVDAFVAECNKENIDAVVVATVTEKPNLVMHWNGETIVDLE RRFLDTNGVRVVVDAKVVDKDVKLPEERQTSAETLEADTLEVLADLNHASQKGLQTIFDS SVGRSTVNHPLGGRYQITPTEASVQKLPVQHGVTTTASVMAQGFNPYVAEWSPYHGAAYA VIEATARLVAAGANWSKARFSYQEYFERMDKQAERFGQPVSALLGSIEAQIQLGLPSIGG KDSMSGTFEELTVPPTLVAFGVTTADSRKVLSPEFKAAGENIYYIPGQALAQEIDFDLIK SNFAKFEAIQADYKVTSASAVKYGGVVEALALATFGNHIGATVTLENLETALTAQLGGFV FTSPEEISGVAKIGQTAADFTLTVNGVTLDGHKLDSAFQGKLEEVYPTEFAQATELEEVP AVASDAVIKAKETVETPVVYIPVFPGTNSEYDSAKAFEKEGAKVNLVPFVTLNEEAIVKS VDTMVDNVEKANIIFFAGGFSAADEPDGSAKFIVNILLNEKVRAAIDRFIERGGLIIGIC NGFQALVKSGLLPYGNFEDASSTSPTLFYNDANQHVAKMVETRIANTNSPWLAGVKVGDI HAIPVSHGEGKFVVTAEEFAELRDNGQIFTQYVDFEGKPSMDSKYNPNGSVNAIEGITSK NGQIIGKMGHSERFEDGLFQNIPGSKDQHLFASAVKYFTGK >gi|311100503|gb|AEKO01000008.1| GENE 9 9697 - 11136 1710 479 aa, chain + ## HITS:1 COG:SP0046 KEGG:ns NR:ns ## COG: SP0046 COG0034 # Protein_GI_number: 15899991 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 479 1 479 480 906 91.0 0 MTYEVKSLNEECGVFGIWGHPDAAKLTYFGLHSLQHRGQEGAGILSNDAGQLKRHRDMGL LSEVFRDPANLDKLTGMAAIGHVRYATAGEASVDNIQPFMFKFHDGQLGLAHNGNLTNAE SLRHELEKNGAIFSSTSDSEILAHLIRRSHNPSFMGKLKEALNTVKGGFAYLLMLEDKLI AALDPNGFRPLSLGKMANGAIVVSSETCAFEVVGAEWIRDVNPGEVVIIDDNGITYDTYT TDTQLAVCSMEYIYFARPDSNIQGVNVHTARKRMGAQLAREFKHEADIVVGVPNSSLSAA MGFAEESGLPNEMGLIKNQYTQRTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMIDDSI VRGTTSRRIVQLLKEAGATEVHVAIGSPALAYPCFYGIDIQTRKELIAANHTVEETREII GADSLTYLSIDGLIDSIGIDTDAPNGGLCVAYFDGKYPTPLYDYEERYLESLKEHTSFY >gi|311100503|gb|AEKO01000008.1| GENE 10 11348 - 12370 852 340 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 6 329 13 337 356 332 52 2e-90 MTNKNAYAQSGVDVEAGYEVVERIKKHVARTERAGVMGALGGFGGMFDLSKTGVKEPVLI SGTDGVGTKLMLAIKYDKHDTIGQDCVAMCVNDIIAAGAEPLYFLDYVATGKNEPAKLEQ VVAGVAEGCVQSGAALIGGETAEMPGMYGEDDYDLAGFAVGIAEKSQIIDGSKVAEGDVL LGLASSGIHSNGYSLVRRVFADYTGEEVLPELEGKKLKDVLLEPTRIYVKAALPLIKEEL VNGIAHITGGGFIENVPRMFSDDLAAEINESKVPVLPIFKALEKYGEIKHEEMFEIFNMG IGLMLAVKPENVERVKELLDEPVYEIGRIVKKDGASVVIK >gi|311100503|gb|AEKO01000008.1| GENE 11 12555 - 13103 570 182 aa, chain + ## HITS:1 COG:SPy0028 KEGG:ns NR:ns ## COG: SPy0028 COG0299 # Protein_GI_number: 15674272 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Streptococcus pyogenes M1 GAS # 1 182 1 182 184 316 84.0 1e-86 MKIAVFASGNGSNFQVIAEQFPVEFVFSDHRNTYVLERAKNLNVVSHAFELKEFDNKAAY EEAIVKLLDDHQIDLVCLAGYMKIVGPTLLAAYEGRIINIHPAYLPEFPGAHGIEDAWNA GVNQSGVTIHWVDSGVDTGKVIKQVRVPRLEGDTLDTFETRIHETEYKLYPEVLDSLGVA RK >gi|311100503|gb|AEKO01000008.1| GENE 12 13179 - 14726 1766 515 aa, chain + ## HITS:1 COG:SP0050 KEGG:ns NR:ns ## COG: SP0050 COG0138 # Protein_GI_number: 15899995 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Streptococcus pneumoniae TIGR4 # 1 515 1 515 515 953 94.0 0 MTKRALISVSDKAGIVEFAQELKKLGWDIISTGGTKVALDNAGVDTIAIDDVTGFPEMMD GRVKTLHPIIHGGLLARRDLDSHLQAAKDNNIELIDLVVVNLYPFKETILKPDVTYADAV ENIDIGGPSMLRSAAKNHASVTVVVDPADYAVVLDELSANGETSYETRQRLAAKVYRHTA SYDALIAEYFTAQVGETKPEKLTLTYDLKQPMRYGENPQQDADFYQKGLPTAYSIASAKQ LNGKELSFNNIRDADAAIRIIRDFKDRPTVVALKHMNPCGIGQADDIETAWDYAYEADPV SIFGGIVVLNREVDATTAKKMHGVFLEIIIAPSYTDEALEILTTKKKNLRILELPFDAQD ASEAEAEYTGVVGGLLVQNQDVVKESPADWQVVTKRQPTETEAIALEFAWKAIKYVKSNG IIVTNDHMTLGVGPGQTNRVASVRIAIEQAKDRLDGAVLASDAFFPFADNVEEIAKAGIK AIIQPGGSVRDQESIEAADQHGLTMIFTGVRHFRH >gi|311100503|gb|AEKO01000008.1| GENE 13 14918 - 15757 907 279 aa, chain - ## HITS:1 COG:SPy0031 KEGG:ns NR:ns ## COG: SPy0031 COG3942 # Protein_GI_number: 15674273 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 27 206 37 220 374 197 58.0 2e-50 MKKKLLNCLLPLACLATISVSCGSSAQAAVLGDDYPSSWKYGGIGVDPWTMYWRQCTSFA AYRLSNSNGFTLPVGYGNAITWGPIARANGHRVDMNPAVGSIAWFSNGVNGAGYMGHVAW VAEVNGDQVTIEEYNYNAGQGPEKYHKRSFHKSQVSGYIHFKDLEPGAQNGNSTNSSIKV GDTVRFSGTFRVTSVSGNTITSQDLAGGTPTKHNIIDPGPVLEVDGQGNPTSDQYLNPGE TFTIPGNFKVLAIDPPSDGVLVQIGNRKTWVTQSVLEKV >gi|311100503|gb|AEKO01000008.1| GENE 14 16065 - 17327 1387 420 aa, chain + ## HITS:1 COG:SP0051 KEGG:ns NR:ns ## COG: SP0051 COG0151 # Protein_GI_number: 15899996 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 420 1 420 420 734 89.0 0 MKLLVVGSGGREHAIAKKLLESKDVEQVFVAPGNDGMTLDGLDLINIGISEHSKLIDFAK ANDIAWTFIGPDDALAAGIVDDFNTAGLKAFGPIKAAAELEWSKDFAKEIMVKYDVPTAA YGTFSDFEEAKAYIEEKGAPIVVKADGLALGKGVIVAETVEQAVEAAHEMLLDNKFGDSG ARVVIEEFLDGEEFSLFAFVNGDKFYIMPTAQDHKRAYDGDKGPNTGGMGAYAPVPHLPQ SVVDMTVDTIVKPVLEGMIKEGCPYTGVLYAGLILTADGPKVIEFNSRFGDPETQIILPR LTSDFAQNITDILDGKEPTITWTDKGVTLGVVVASNGYPLAYEKGVKLPAKTEGDIITYY AGAKFAENGQDLLSNGGRVYMLVTTADTVKDGQNIIYNELNKQNTEGLFYRTDIGSKANK >gi|311100503|gb|AEKO01000008.1| GENE 15 17536 - 18024 733 162 aa, chain + ## HITS:1 COG:SP0053 KEGG:ns NR:ns ## COG: SP0053 COG0041 # Protein_GI_number: 15899998 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Streptococcus pneumoniae TIGR4 # 1 161 1 161 162 249 96.0 1e-66 MKPVISIVMGSKSDWATMQKAAEVLDNFGVAYEKKVVSAHRTPDLMFKHAEEARSRGIKV IIAGAGGAAHLPGMVAAKTTLPVIGVPVKSRALSGVDSLYSIVQMPGGVPVATMAIGEAG ATNAALFALRLLSVEDKAIADALANFAEEQGKIAEESTNELN >gi|311100503|gb|AEKO01000008.1| GENE 16 18011 - 19102 1175 363 aa, chain + ## HITS:1 COG:SP0054 KEGG:ns NR:ns ## COG: SP0054 COG0026 # Protein_GI_number: 15899999 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Streptococcus pneumoniae TIGR4 # 1 363 1 363 363 640 90.0 0 MSSTKTIGIIGGGQLGQMMAISAIYMGHKVITLDPAADCPSSRVSEVIVAPYDDVDALRQ LADRCDVLTYEFENVDADGLDAVIKDGQLPQGTDLLRISQNRIFEKDFLSNKAKVTVAPY KVVTSSLDLEDIDLSKKYVLKTATGGYDGHGQKVITSADDLEEANALANSAECVLEEFVN FDLEISVIVSGNGKDVAVFPVQENIHRNNILSKTIVPARISDSLAEKAKAMAVKIAEQLN LSGTLCVEMFATSDDIIVNEIAPRPHNSGHYSIEACDFSQFDTHILGVLGAPLPAIHLHA PAVMLNVLGQHIEAAERYVTENPSAHLHMYGKLEAKHNRKMGHVTLFSDEPDNVVEFGKG IDF >gi|311100503|gb|AEKO01000008.1| GENE 17 19103 - 20053 622 316 aa, chain + ## HITS:1 COG:CAC3607 KEGG:ns NR:ns ## COG: CAC3607 COG1893 # Protein_GI_number: 15896841 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Clostridium acetobutylicum # 1 308 1 302 308 95 25.0 1e-19 MRIAILGLGVIGTTYAYAFQKAGHQVEHVLRDSKRNNAPKSLSVDLLDGRYHSKGENKHD TYEVHVAEADSEYDFIFLSVRHGFVKGAVETLRKNNIKGTLVFFCNFWNTRKDVQEWAGD YDYILAFPTAGGHMQEDHLDGVLFDHLMLEGEQKAHISNYADLRTLLTSADLKWEVPHDM VEWIWIHMAINAGVTSTAARSGKLENPEQMALNLMDSSSELSLAIKAIREALKVVEARGV NLNLYKAELLPYKIPAWIAGKAMKIMFAKNELTRKIMTLHNDKQDIFYCCQSVYQTGQEL GVEMPILEANMKGISL >gi|311100503|gb|AEKO01000008.1| GENE 18 20063 - 20311 389 82 aa, chain + ## HITS:1 COG:no KEGG:SPP_0120 NR:ns ## KEGG: SPP_0120 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_P1031 # Pathway: not_defined # 1 75 1 75 75 116 85.0 3e-25 MIQLIVNAFVEKEKTGAVVEVLYASSDHEKVKAKYEELVAQYPENYLAIYDLPMDTDLNT LDHYPSVWIGKEEFEEKTDYEA >gi|311100503|gb|AEKO01000008.1| GENE 19 20301 - 22106 781 601 aa, chain + ## HITS:1 COG:no KEGG:EC55989_3921 NR:ns ## KEGG: EC55989_3921 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_55989 # Pathway: not_defined # 1 599 21 626 628 438 41.0 1e-121 MRLKQIKINNFRGYKDETIVDFDNLTAFIGKNDVGKSTILEALEIFFNNKMVVCEKDDLS VGVDSDSIFITCIFDELPDEIVVDTSSKTSLKDENLLNSNGDLEIKKTFKCSSAKPKPET KIICNHPIDDNYNDLLLLKQVDLKKRAVDLGIDENKYDKRSNVSIRQAILSSKRDLTIKE IELEVTKEDAKKVYGVIETFLPIYALFQSDRSSSDSDKEIADPMSVAVSQALQELQTEIN KIKSEVQKKAIETAGRTLAKLQEMDEDLAASLVPEFKSEPKFDSLFKLSIKSDDDISINK RGSGVRRLILLNFFRAEAERKLSEVERNKSIIYAFEEPETSQHPSHQKLLIEAFLELSSK ENTQIILTTHTPALGGLLPTTSLRLVEKSDKSQVSNGSDEVLQKITETLGVLPDPISNET KGLILIEGKTDIIFFEHLCKVLKESGEIDKTFKEAKIALVPTGGCDNLKSWITMKTVDQF GLPFGIFLDSDRMFPTDQTKNTATIDKNTEHGRIAFCTRKREAENYLHPDIFGGSVCITD YNDVKEEVKKFNQTKESKVLKNYWPKMTIEQIHEQEKYRDNNGTEHFELTEIVKSFLTLV G >gi|311100503|gb|AEKO01000008.1| GENE 20 22130 - 22897 230 255 aa, chain + ## HITS:1 COG:no KEGG:CLI_0774 NR:ns ## KEGG: CLI_0774 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 3 216 8 208 239 135 40.0 2e-30 MVNTGKKLEDYAQYVYSRLLELNDYENTLVSTKVTIKGQSGATNEFDVYYQFTHLNIECR VAIECKDWKNRVSIKEIRDFSTKLQDVGLGNIIGIMISKVGFQEGTKVFAESNGIKLMTV DELPTIVDIVVGTIKKGFLPDEKVQGEPFWMLMEQSNGEVTGSFYQYPNIQDSHVTLPLF YSKKMAQYYYDNVPDKENYCIRGVSNFQLRRLIGLADLQSLQFILFPFPYSLDGLDLNEF PGIIVSADVIKNDYL >gi|311100503|gb|AEKO01000008.1| GENE 21 22924 - 24222 1558 432 aa, chain + ## HITS:1 COG:SP0056 KEGG:ns NR:ns ## COG: SP0056 COG0015 # Protein_GI_number: 15900001 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Streptococcus pneumoniae TIGR4 # 1 432 1 432 432 834 96.0 0 MIERYSRPEMANIWTEENKYRAWLEVEILADEAWAELGEIPKEDVALIREKADFDIDRIL EIEQQTRHDVVAFTRAVSETLGEERKWVHYGLTSTDVVDTAYGYLYKQANDIIRRDLENF LNIISDKAKEHKFTIMMGRTHGVHAEPTTFGLKLATWYSEMKRNIERFEHAAAGVEAGKI SGAVGNFANIPPFVEKYVCDKLGIRAQEISTQVLPRDLHAEYFAVLASIATSIERMATEI RGLQKSEQREVEEFFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGHMVTAYENVSLWHE RDISHSSAERIITPDTTILIDYMLNRFGNIVKNLTVFPENMIRNMNSTFGLIFSQRAMLT LIEKGMTREQAYDLVQPKTAQSWDNQVDFKPLLESDPEVTSRLTQEEIDEIFNPVYYTKR VDEIFERIGLGD >gi|311100503|gb|AEKO01000008.1| GENE 22 25100 - 26791 1974 563 aa, chain - ## HITS:1 COG:SPy2151 KEGG:ns NR:ns ## COG: SPy2151 COG0018 # Protein_GI_number: 15675893 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 563 1 563 563 955 85.0 0 MNTKELIAAEIAKVVPELEQENIQNLLETPKNADMGDLAFPAFSLAKVLRKAPKMIAADI AEKIDASNFEKVEAVGPYINFFLDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFDMSS PNIAKPFSIGHLRSTVIADALANIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEA VKANPINELLQLYVRINAEAEKDPSVDEEAREWFRKLEAGDEEATALWQWFRDESLVEFN RLYDELDVSFDSYNGEAFYNDKMDEVVDILTEKGLLQESQGAQVVNLEKYGIEHPALIKK SDGATLYITRDLAAALYRKRTYDFAKAIYVVGNEQSAHFKQLKAVLKEMGYDWSDDMTHV AFGLVTKNGKKLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVAHAVGVGAIK FYDLKTDRMNGYDFDLDAMVSFEGETGPYVQYAHARIQSILRKADFTPSEDATYSLNDVE SWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFNKYYAHTRILDESPERDSRLAL CYATATVLKEALRLLGVEAPDEM >gi|311100503|gb|AEKO01000008.1| GENE 23 26949 - 27374 483 141 aa, chain + ## HITS:1 COG:SPy2150 KEGG:ns NR:ns ## COG: SPy2150 COG1438 # Protein_GI_number: 15675892 # Func_class: K Transcription # Function: Arginine repressor # Organism: Streptococcus pyogenes M1 GAS # 2 140 3 141 145 164 65.0 3e-41 MKRDRQAVIKQMISRDKIGTQEEIKQRLEAEGITVTQATLSRDLREIGLLKLRDEEGRLY YSLSEHVLPSLDPTAKDYVKSVSRAQFMLVLHTELGEADVLANLIDSDGNPEILGTVAGA DTLLVICKDAVVAERLESEFH >gi|311100503|gb|AEKO01000008.1| GENE 24 27374 - 27733 457 119 aa, chain + ## HITS:1 COG:L79329 KEGG:ns NR:ns ## COG: L79329 COG4550 # Protein_GI_number: 15674193 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 15 119 10 114 115 60 37.0 6e-10 MNTLHQDFQKAKEELIDLLKHHEAVLAFQEAEKAIGQIPQISDLAGQMKSYQQEAVLFQK IEKQRAYEEAGEQADLIQNELENLPIVQDYRQKMQDASDLIQYVTKSIEERINEELRHG >gi|311100503|gb|AEKO01000008.1| GENE 25 27726 - 30284 2975 852 aa, chain + ## HITS:1 COG:SPy2148 KEGG:ns NR:ns ## COG: SPy2148 COG0249 # Protein_GI_number: 15675890 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Streptococcus pyogenes M1 GAS # 1 852 1 851 851 1276 75.0 0 MAKEKISPGMQQYLDIKENYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADN PIPMAGVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTVVDSSK PDNANNFLVAIDKVGSRFGLAYMDVSTGEFFATELDDFSSVCSEIQNLKTREVVVGYDLP EADEQVLVKQLNLLLSKETEVYDDVHLIDTSLTDLESSVAGKLLQYVHRTQMRELSHLQK AQHYEIKDYLQMSYATKSSLDLLENARTGKKHGSLFWLLDETKTAMGMRLLRTWIDRPLV NQATITERQNIIQVFLDNFFERSDLTESLKGVYDIERLASRVSFGKANPKDLIQLGHTLA QVPVIKAILESFNEDALSRLLQELDALPELESLIRSAIDPDAPATITEGGIIRAGFDETL DKYRKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKA TLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVECYIDRLQSLAKAIATVD VLQSLAVIAETNHYVRPVFNEEHRIVIDQGRHAVVEKVMGVQEYIPNTITFDSQTNVQLI TGPNMSGKSTYMRQLALSVVMAQMGSYVPADSIDLPIFDAIYTRIGAADDLISGQSTFMV EMMEANQAIKRGTPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHEL TALSNSLPHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERAGTI LTQLEGETVTIQPQEKVSPQEKPATETHINEQISLFDDFTENPVLQELRDLDIYNMTPMQ VMMAVADLKQKL >gi|311100503|gb|AEKO01000008.1| GENE 26 30318 - 30773 337 151 aa, chain - ## HITS:1 COG:no KEGG:STER_0069 NR:ns ## KEGG: STER_0069 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 151 1 151 151 252 92.0 3e-66 MKKQLFKSGTKGILIGLAVSMIMSLIWAPSYMPLNPHSGIGQWMTSHQIHGSIILAYCLI TWFAIGILFEVASYIFRKAEWSLLRSTLTHYALTCLGFIPLATLSGWFPLRLTFYLELVI EFSLIYLLVWVFSYWKMKKDIEQLNQELKHL >gi|311100503|gb|AEKO01000008.1| GENE 27 30770 - 31207 293 145 aa, chain - ## HITS:1 COG:SP0161 KEGG:ns NR:ns ## COG: SP0161 COG3279 # Protein_GI_number: 15900099 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Streptococcus pneumoniae TIGR4 # 1 145 1 145 146 137 56.0 9e-33 MKIKVQIDSVFQEETLQIQAPSRTPKIQQVVEFVESLDNNQRLKGKKDGETYLIEPNTIS RIYIENRQVLAETIQGECHLGLRLYQVLEKLPSYFIKISQSEIVNLKEIERFNITPNGLV EIHLKNKETTYSSRRYLKAIKEKLQ >gi|311100503|gb|AEKO01000008.1| GENE 28 31398 - 31691 137 97 aa, chain + ## HITS:1 COG:no KEGG:str0053 NR:ns ## KEGG: str0053 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 97 5 101 101 128 87.0 7e-29 MKWLAGIFLACSLILSFFTPFEKALTLNLLLLYFFVKQFMDLTSSPKTYQWIFQIVYLLI FSGLIWFNFRHGDMIIIATALSWLTVVCELWLYRKHQ >gi|311100503|gb|AEKO01000008.1| GENE 29 31741 - 33678 2212 645 aa, chain + ## HITS:1 COG:SPy2121 KEGG:ns NR:ns ## COG: SPy2121 COG0323 # Protein_GI_number: 15675871 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Streptococcus pyogenes M1 GAS # 1 645 1 660 660 998 77.0 0 MTKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDN GEGMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEAY GTKLVAKAGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL AHPEVAFTLLNDGRQLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSLP ELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNVH PTKQEVRISKEKELMVLISSAIAQSLREQDLIPDALENLAKSSTRGAAKSVQTSLPLKQT NLYYDSSRNDFFVKPETVQEDIKPLVSESSVSSVKNKPQPSVKQAQRSVDESDSEHEKLD YKNKSKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVKYEY YREKIGEVDSSLQQLLVPYLFEFSGSDYISLQEKMSLLNQVGIYLEPYGNNTFILREHPI WMKEEEIESAVYEMCDMLLLTNEVSVKTYRAELAIMMSCKRSIKANHALDDYSARDLLVQ LAQCKNPYNCPHGRPVLVNFTKSDMEKMFRRIQENHTSLRDLGKY >gi|311100503|gb|AEKO01000008.1| GENE 30 33809 - 34030 275 73 aa, chain + ## HITS:1 COG:no KEGG:STER_0073 NR:ns ## KEGG: STER_0073 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 73 1 73 73 93 87.0 2e-18 MRHLTKTNKHFLLVGLTFLATSLIFYILAWLGQPSLENTLVNVSSIAFTLGIVTYILLGL KMLTDTLKTSSHS >gi|311100503|gb|AEKO01000008.1| GENE 31 34188 - 34778 666 196 aa, chain + ## HITS:1 COG:SPy2119 KEGG:ns NR:ns ## COG: SPy2119 COG0632 # Protein_GI_number: 15675869 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Streptococcus pyogenes M1 GAS # 1 196 1 197 198 305 81.0 4e-83 MYDYIKGTLVKITAKYIVIEANGLGYIITVANPYSFSDQLNQTIQVYLHQVIRDDAHLLF GFHTEDEKEVFLKLISVSGIGPTTALAIVAVDDNQGLVAAVDNSDIKYLMKFPKIGKKTA QQMVLDLAGKFAELPTETTKTTPSQPEGNHQLDEAMEALLALGYKAAEIKKVKAFFEGTN ETAEQYIKSALKMLMK >gi|311100503|gb|AEKO01000008.1| GENE 32 34787 - 35359 403 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 2 181 1 179 185 159 40 2e-38 MVNRCRWVPTNNKLYCDYHDKEWGKPIGDDQKLFELFCLESYQSGLSWLTVLNKRQAFNR VFHDYDIERVARFSLSELEDALQNPDIIRHKLKLEATVNNAKQVLKLQDEFGSLSHYFWH YFDGKPLINNVPTYKDVPSSTDLSQQIAKNLKKRGFKFLGPTTIYSFLQAAGFVNDHENN CDFKEMSRFD >gi|311100503|gb|AEKO01000008.1| GENE 33 35438 - 36709 204 423 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 228 418 712 904 904 83 27 2e-15 MKAELIAVGTEILTGQITNTNAQFLSEKLAELGIDVYFHTAVGDNENRLLSVLDQASQRS DLVILCGGLGPTEDDLTKQTLAKFLGKELVFDEEASKKLDSFFATRPKHTRTPNNDRQAQ IVEGSVPLQNLTGLAVGGIITAQGVTYVVLPGPPSELKSMVNQELIPALTENHTTLYSRV LRFFGVGESQLVTILKDLIVNQTDPTIAPYAKVGEVTLRLSTKASSQEEADRKLDVLEEQ IRSTKTLDGKSLSDLIYGYGESNSLAYEVFYLLKKYGKTITAAESLTAGLFQASVADFSG ASQVFKGGFVTYSIEEKAKMLDIPLSKLEENGVVSHFTAEKMAEGARAKTDSDYGIALTG VAGPDTLEGHQAGTVFIGIADRNQVRSIKVVIGERSRSDVRYISTLYAFNLVRQALLQED NLI >gi|311100503|gb|AEKO01000008.1| GENE 34 36745 - 37884 1421 379 aa, chain + ## HITS:1 COG:SPy2116 KEGG:ns NR:ns ## COG: SPy2116 COG0468 # Protein_GI_number: 15675866 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Streptococcus pyogenes M1 GAS # 1 379 1 378 378 602 90.0 1e-172 MAKKTKKTEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLAL DIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQTQKEGGIAAFIDAEHALDPAYAAAL GVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVAALVPRAEIDGDIGDSHVGLQ ARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG NTQIKGTGDKKDQNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISQTGELVKIASDLGI IQKAGAWFSYNGEKIGQGSENAKKYLADHPEIFEEIDHKVRVHYGLIETDEDDVVEGTQV EDTADDLVLDLDSTIEIEE >gi|311100503|gb|AEKO01000008.1| GENE 35 38061 - 38459 402 132 aa, chain + ## HITS:1 COG:SPy2115 KEGG:ns NR:ns ## COG: SPy2115 COG1393 # Protein_GI_number: 15675865 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Streptococcus pyogenes M1 GAS # 1 132 1 132 132 224 92.0 3e-59 MIKIYTISSCTSCKKAKTWLNNHQLPYKEQNLGKEPLTKEEILTILSKTENGVESIVSSK NRYAKALNCDIDELSVSEVIDLIQDNPRILKSPILIDDKRLQVGYKEDDIRAFLPRSIRN VENSQARMRAAL Prediction of potential genes in microbial genomes Time: Sun May 29 18:52:44 2011 Seq name: gi|311100385|gb|AEKO01000009.1| Streptococcus vestibularis F0396 ctg1126932565719, whole genome shotgun sequence Length of sequence - 130612 bp Number of predicted genes - 123, with homology - 120 Number of transcription units - 68, operones - 35 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.615 - CDS 11 - 700 647 ## COG0670 Integral membrane protein, interacts with FtsH 2 1 Op 2 1/0.615 - CDS 724 - 966 110 ## COG1418 Predicted HD superfamily hydrolase 3 2 Tu 1 . - CDS 1327 - 2064 216 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 - Prom 2118 - 2177 5.1 + Prom 2080 - 2139 5.2 4 3 Tu 1 . + CDS 2167 - 2445 307 ## COG1254 Acylphosphatases + Prom 2447 - 2506 5.1 5 4 Tu 1 . + CDS 2562 - 3449 799 ## COG0706 Preprotein translocase subunit YidC + Term 3513 - 3557 8.3 6 5 Op 1 . - CDS 3851 - 4108 189 ## COG2801 Transposase and inactivated derivatives 7 5 Op 2 . - CDS 4108 - 4353 142 ## SPH_1455 integrase core subunit 8 5 Op 3 . - CDS 4272 - 4427 85 ## SPCG_0026 hypothetical protein - Prom 4579 - 4638 2.9 - Term 4613 - 4658 12.1 9 6 Op 1 3/0.231 - CDS 4740 - 5222 729 ## COG0782 Transcription elongation factor 10 6 Op 2 2/0.231 - CDS 5306 - 7279 1535 ## COG1559 Predicted periplasmic solute-binding protein - Prom 7307 - 7366 5.5 11 7 Tu 1 2/0.231 - CDS 7379 - 7870 486 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 7886 - 7922 5.2 12 8 Op 1 . - CDS 7931 - 9259 1492 ## COG0773 UDP-N-acetylmuramate-alanine ligase 13 8 Op 2 . - CDS 9286 - 10002 690 ## str0238 hypothetical protein - Prom 10078 - 10137 6.4 14 9 Tu 1 . - CDS 10157 - 13252 2467 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 13273 - 13332 6.2 - Term 13318 - 13354 4.2 15 10 Op 1 . - CDS 13360 - 15225 1886 ## str0235 hypothetical protein 16 10 Op 2 3/0.231 - CDS 15228 - 16394 1234 ## COG0116 Predicted N6-adenine-specific DNA methylase - Prom 16414 - 16473 3.6 17 11 Op 1 6/0.000 - CDS 16927 - 17259 337 ## COG3599 Cell division initiation protein - Prom 17290 - 17349 7.0 18 11 Op 2 . - CDS 17368 - 17883 393 ## COG4474 Uncharacterized protein conserved in bacteria - Prom 17933 - 17992 3.7 + Prom 17864 - 17923 6.9 19 12 Op 1 7/0.000 + CDS 17961 - 18557 287 ## COG3331 Penicillin-binding protein-related factor A, putative recombinase 20 12 Op 2 . + CDS 18557 - 20848 2390 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 20862 - 20894 3.3 - Term 20897 - 20948 3.7 21 13 Tu 1 . - CDS 20957 - 22294 1480 ## COG3579 Aminopeptidase C - Prom 22320 - 22379 7.2 - Term 22351 - 22387 5.0 22 14 Op 1 . - CDS 22396 - 22836 350 ## COG3152 Predicted membrane protein 23 14 Op 2 5/0.000 - CDS 22852 - 23673 1151 ## COG0171 NAD synthase 24 14 Op 3 . - CDS 23685 - 25139 1283 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 25194 - 25253 7.9 + Prom 25153 - 25212 5.8 25 15 Op 1 . + CDS 25324 - 25614 58 ## gi|262282586|ref|ZP_06060354.1| LOW QUALITY PROTEIN: transposase 26 15 Op 2 . + CDS 25674 - 25985 61 ## MCCL_plsB0035 truncated integrase + Term 26024 - 26069 1.3 + Prom 26782 - 26841 6.4 27 16 Op 1 11/0.000 + CDS 26886 - 28346 1566 ## COG3037 Uncharacterized protein conserved in bacteria 28 16 Op 2 13/0.000 + CDS 28399 - 28680 402 ## COG3414 Phosphotransferase system, galactitol-specific IIB component + Term 28689 - 28735 9.2 29 16 Op 3 8/0.000 + CDS 28754 - 29239 634 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) + Term 29265 - 29308 4.3 + Prom 29296 - 29355 3.0 30 16 Op 4 9/0.000 + CDS 29390 - 30055 778 ## COG0269 3-hexulose-6-phosphate synthase and related proteins 31 16 Op 5 8/0.000 + CDS 30059 - 30922 675 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase 32 16 Op 6 . + CDS 30922 - 31632 841 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 33 16 Op 7 1/0.615 + CDS 31667 - 32311 702 ## COG0176 Transaldolase + Term 32357 - 32398 3.1 + Prom 32573 - 32632 5.2 34 17 Tu 1 . + CDS 32666 - 34330 904 ## COG3711 Transcriptional antiterminator + Term 34344 - 34381 4.2 + Prom 34951 - 35010 7.9 35 18 Op 1 . + CDS 35054 - 36145 1118 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 36218 - 36257 5.9 + Prom 36243 - 36302 7.5 36 18 Op 2 . + CDS 36427 - 38400 2024 ## COG0021 Transketolase + Term 38454 - 38512 14.0 - Term 38442 - 38499 9.2 37 19 Tu 1 . - CDS 38727 - 38945 137 ## GYMC10_3007 transcriptional regulator, LacI family - Prom 39009 - 39068 2.4 - Term 39453 - 39496 3.2 38 20 Op 1 . - CDS 39656 - 42613 2276 ## COG1876 D-alanyl-D-alanine carboxypeptidase 39 20 Op 2 . - CDS 42668 - 43291 417 ## gi|228477879|ref|ZP_04062493.1| hypothetical protein STRSA0001_0590 40 20 Op 3 . - CDS 43301 - 43687 396 ## COG3942 Surface antigen - Prom 43894 - 43953 6.5 - Term 44117 - 44155 -0.9 41 21 Op 1 . - CDS 44171 - 44905 334 ## SZO_07700 lantibiotic ABC transporter protein 42 21 Op 2 . - CDS 44907 - 45650 455 ## SZO_07690 lantibiotic ABC transporter protein 43 21 Op 3 . - CDS 45652 - 46560 260 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 46786 - 46845 6.2 + Prom 46732 - 46791 7.6 44 22 Op 1 40/0.000 + CDS 46813 - 47511 428 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 45 22 Op 2 10/0.000 + CDS 47528 - 48559 453 ## COG0642 Signal transduction histidine kinase 46 22 Op 3 . + CDS 48538 - 48891 233 ## COG0642 Signal transduction histidine kinase + Term 48996 - 49057 7.6 - Term 49462 - 49497 4.4 47 23 Tu 1 . - CDS 49520 - 49933 146 ## SGO_0335 hypothetical protein - Prom 50011 - 50070 2.0 + Prom 49657 - 49716 3.0 48 24 Tu 1 . + CDS 49828 - 50067 92 ## 49 25 Tu 1 . - CDS 50075 - 51307 704 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 51336 - 51395 4.5 - Term 51341 - 51376 3.5 50 26 Tu 1 . - CDS 51532 - 51819 269 ## STER_0270 transcriptional regulator - Prom 51922 - 51981 4.5 - Term 51869 - 51911 9.4 51 27 Tu 1 . - CDS 52085 - 54586 3193 ## COG0495 Leucyl-tRNA synthetase - Prom 54678 - 54737 9.3 + Prom 54663 - 54722 5.7 52 28 Op 1 2/0.231 + CDS 54760 - 55527 521 ## COG1349 Transcriptional regulators of sugar metabolism 53 28 Op 2 . + CDS 55520 - 56329 679 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 56387 - 56425 5.3 - Term 56416 - 56453 3.0 54 29 Op 1 . - CDS 56461 - 56952 298 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 56977 - 57036 1.8 55 29 Op 2 . - CDS 57077 - 57616 796 ## COG0250 Transcription antiterminator - Prom 57764 - 57823 8.3 - Term 57766 - 57810 10.1 56 30 Op 1 . - CDS 58002 - 58154 252 ## PROTEIN SUPPORTED gi|55820311|ref|YP_138753.1| 50S ribosomal protein L33 57 30 Op 2 . - CDS 58201 - 60528 2441 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 60605 - 60664 4.0 + Prom 60386 - 60445 5.3 58 31 Tu 1 . + CDS 60594 - 61463 443 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Prom 61559 - 61618 6.1 59 32 Op 1 . + CDS 61646 - 61978 442 ## STER_0258 hypothetical protein 60 32 Op 2 . + CDS 61978 - 62283 94 ## str0209 hypothetical protein + Prom 62285 - 62344 10.7 61 33 Tu 1 . + CDS 62385 - 63248 694 ## STER_0256 hypothetical protein + Term 63270 - 63323 9.5 - Term 63254 - 63315 8.3 62 34 Op 1 41/0.000 - CDS 63327 - 64946 1574 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 63 34 Op 2 . - CDS 64991 - 65278 428 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 65362 - 65421 7.8 - Term 65381 - 65439 12.4 64 35 Op 1 13/0.000 - CDS 65444 - 66247 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 65 35 Op 2 . - CDS 66247 - 68187 2081 ## COG4120 ABC-type uncharacterized transport system, permease component - Prom 68375 - 68434 4.4 - Term 68756 - 68793 2.3 66 36 Op 1 7/0.000 - CDS 68804 - 70651 2217 ## COG0442 Prolyl-tRNA synthetase 67 36 Op 2 12/0.000 - CDS 70737 - 71999 1370 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 68 36 Op 3 32/0.000 - CDS 72016 - 72810 917 ## COG0575 CDP-diglyceride synthetase 69 36 Op 4 2/0.231 - CDS 72823 - 73572 1022 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 73596 - 73655 4.4 - Term 73656 - 73687 -0.8 70 37 Tu 1 . - CDS 73701 - 74039 509 ## COG1862 Preprotein translocase subunit YajC - Prom 74066 - 74125 3.4 - Term 74120 - 74154 3.0 71 38 Tu 1 . - CDS 74165 - 74881 1043 ## COG0217 Uncharacterized conserved protein - Prom 74968 - 75027 7.3 - Term 75028 - 75057 2.1 72 39 Tu 1 . - CDS 75069 - 76418 1662 ## COG0166 Glucose-6-phosphate isomerase - Prom 76447 - 76506 8.1 73 40 Op 1 1/0.615 - CDS 76523 - 77338 947 ## COG3568 Metal-dependent hydrolase - Prom 77364 - 77423 5.4 - Term 77386 - 77412 -1.0 74 40 Op 2 . - CDS 77437 - 79623 2596 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 79667 - 79726 7.8 - Term 79728 - 79768 6.1 75 41 Tu 1 . - CDS 79778 - 80716 965 ## COG0679 Predicted permeases - Prom 80738 - 80797 4.6 - Term 80834 - 80866 2.0 76 42 Op 1 42/0.000 - CDS 80879 - 81691 844 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 77 42 Op 2 3/0.231 - CDS 81684 - 82391 934 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 78 42 Op 3 18/0.000 - CDS 82393 - 82848 568 ## COG1846 Transcriptional regulators 79 42 Op 4 . - CDS 82942 - 84210 340 ## PROTEIN SUPPORTED gi|148990506|ref|ZP_01821647.1| ribosomal protein L11 methyltransferase - Prom 84367 - 84426 4.2 - Term 84386 - 84430 9.4 80 43 Op 1 2/0.231 - CDS 84439 - 85416 460 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 81 43 Op 2 . - CDS 85409 - 86275 934 ## COG1281 Disulfide bond chaperones of the HSP33 family - Term 86291 - 86341 3.1 82 43 Op 3 . - CDS 86355 - 86714 344 ## str0179 hypothetical protein - Prom 86741 - 86800 6.2 - Term 86843 - 86869 -1.0 83 44 Op 1 6/0.000 - CDS 86889 - 88307 1770 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 84 44 Op 2 19/0.000 - CDS 88383 - 88814 483 ## COG0822 NifU homolog involved in Fe-S cluster formation 85 44 Op 3 24/0.000 - CDS 88801 - 90033 1299 ## COG0520 Selenocysteine lyase 86 44 Op 4 41/0.000 - CDS 90087 - 91349 1775 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 87 44 Op 5 2/0.231 - CDS 91386 - 92156 170 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 92212 - 92271 5.8 - Term 92171 - 92198 -0.8 88 45 Op 1 2/0.231 - CDS 92282 - 93475 1095 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 89 45 Op 2 . - CDS 93479 - 94228 892 ## COG4862 Negative regulator of genetic competence, sporulation and motility - Prom 94391 - 94450 6.9 + Prom 94350 - 94409 5.4 90 46 Tu 1 . + CDS 94497 - 94775 193 ## str0161 hypothetical protein - Term 94809 - 94846 4.1 91 47 Tu 1 . - CDS 94853 - 95707 1103 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 95770 - 95829 6.5 + Prom 95820 - 95879 9.1 92 48 Op 1 16/0.000 + CDS 95910 - 97457 1701 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 93 48 Op 2 . + CDS 97457 - 98197 289 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein + Term 98208 - 98239 1.1 - Term 98233 - 98276 0.3 94 49 Tu 1 . - CDS 98287 - 100614 3135 ## SGO_0430 LPXTG cell wall surface protein 95 50 Tu 1 . + CDS 101106 - 101321 164 ## str0155 hypothetical protein + Term 101345 - 101378 -0.7 - Term 101006 - 101044 -0.3 96 51 Op 1 . - CDS 101291 - 101503 81 ## 97 51 Op 2 . - CDS 101561 - 101818 428 ## PROTEIN SUPPORTED gi|228476469|ref|ZP_04061159.1| ribosomal protein S15 - Prom 101910 - 101969 7.5 98 52 Tu 1 . - CDS 101977 - 103134 767 ## COG0477 Permeases of the major facilitator superfamily - Prom 103180 - 103239 9.1 + Prom 103142 - 103201 6.4 99 53 Op 1 . + CDS 103242 - 103880 632 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 103884 - 103943 6.2 100 53 Op 2 . + CDS 103974 - 104588 877 ## COG0242 N-formylmethionyl-tRNA deformylase + Term 104595 - 104627 2.0 101 54 Op 1 . - CDS 104788 - 105366 494 ## 102 54 Op 2 . - CDS 105396 - 106571 897 ## SGO_0181 putative lipoprotein - Prom 106615 - 106674 2.3 - Term 106579 - 106612 2.3 103 55 Tu 1 . - CDS 106677 - 109286 2810 ## SGO_0430 LPXTG cell wall surface protein - Prom 109507 - 109566 11.7 - Term 109614 - 109645 0.2 104 56 Tu 1 . - CDS 109670 - 110920 1506 ## COG1171 Threonine dehydratase - Prom 110982 - 111041 10.2 - Term 110987 - 111024 4.1 105 57 Tu 1 . - CDS 111242 - 111442 283 ## gi|3023639|sp|Q59979|DEXT_STRSL RecName: Full=Dextranase; AltName: Full=Alpha-1,6-glucan-6-glucanohydrolase; Flags: Precursor gi|961505|dbj|BAA06127.1| dextranase (1,6-alpha-glucanhydrolase) - Term 111771 - 111809 2.1 106 58 Op 1 7/0.000 - CDS 111816 - 112259 544 ## COG1490 D-Tyr-tRNAtyr deacylase 107 58 Op 2 . - CDS 112272 - 114491 2390 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 114517 - 114576 4.9 + Prom 114406 - 114465 8.6 108 59 Tu 1 . + CDS 114659 - 115114 484 ## COG1780 Protein involved in ribonucleotide reduction + Term 115117 - 115167 5.7 - Term 114962 - 115000 2.9 109 60 Tu 1 . - CDS 115104 - 116054 778 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 116253 - 116312 8.5 - Term 116351 - 116391 3.5 110 61 Op 1 9/0.000 - CDS 116392 - 117108 936 ## COG1385 Uncharacterized protein conserved in bacteria 111 61 Op 2 1/0.615 - CDS 117136 - 118089 1600 ## PROTEIN SUPPORTED gi|228477939|ref|ZP_04062552.1| ribosomal protein L11 methyltransferase 112 61 Op 3 . - CDS 118090 - 118536 339 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 113 61 Op 4 . - CDS 118552 - 119022 505 ## str0135 hypothetical protein - Prom 119049 - 119108 7.3 - Term 119071 - 119108 5.5 114 62 Op 1 5/0.000 - CDS 119117 - 120721 1901 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 120747 - 120806 8.0 - Term 120912 - 120955 -1.0 115 62 Op 2 1/0.615 - CDS 120973 - 121503 640 ## COG3343 DNA-directed RNA polymerase, delta subunit - Prom 121617 - 121676 7.5 - Term 121655 - 121702 3.7 116 63 Tu 1 . - CDS 121706 - 122989 1542 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 123131 - 123190 12.3 + Prom 122957 - 123016 7.1 117 64 Tu 1 2/0.231 + CDS 123132 - 123512 297 ## COG0668 Small-conductance mechanosensitive channel 118 65 Tu 1 . + CDS 123674 - 123973 192 ## COG0668 Small-conductance mechanosensitive channel - Term 123918 - 123959 -0.6 119 66 Tu 1 . - CDS 124076 - 124573 343 ## str0130 transcriptional regulator, competence factor,RNA polymerase sigma factor - Prom 124617 - 124676 7.2 120 67 Op 1 . - CDS 124901 - 125098 203 ## gi|171778703|ref|ZP_02919799.1| hypothetical protein STRINF_00651 121 67 Op 2 . - CDS 125123 - 125404 244 ## gi|171778703|ref|ZP_02919799.1| hypothetical protein STRINF_00651 - Prom 125588 - 125647 6.8 + Prom 126519 - 126578 3.3 122 68 Op 1 2/0.231 + CDS 126682 - 127416 171 ## COG3464 Transposase and inactivated derivatives 123 68 Op 2 . + CDS 127434 - 127937 299 ## COG3464 Transposase and inactivated derivatives - TRNA 128046 - 128119 76.4 # Asn GTT 0 0 - 5S_RRNA 128125 - 128240 99.0 # S43413 [D:98..213] # # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - LSU_RRNA 128324 - 130612 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. Predicted protein(s) >gi|311100385|gb|AEKO01000009.1| GENE 1 11 - 700 647 229 aa, chain - ## HITS:1 COG:SPy0358 KEGG:ns NR:ns ## COG: SPy0358 COG0670 # Protein_GI_number: 15674509 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Streptococcus pyogenes M1 GAS # 1 229 1 229 229 244 65.0 1e-64 MKSNAIYTTSDAGLNRFFGKVYGLVGIGVGLSAVISYLMLFPLSHLFVNILMNYSWIYMA AIFIELALVFLASGAARRNTPAALPLFLVYSALNGFTLSFIIAQYTQAIVFQAFLSTAIV FFVMALIGVSIKRDLSGIVKFLMAALIGIIVASLVNIFFASSTMSFVISIVSVLIFSGLI AYDNQLIKKIYYSTNGQVTDGWAVSMALSLYLDFINLFLNILRIFASRD >gi|311100385|gb|AEKO01000009.1| GENE 2 724 - 966 110 80 aa, chain - ## HITS:1 COG:SPy0357 KEGG:ns NR:ns ## COG: SPy0357 COG1418 # Protein_GI_number: 15674508 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 80 87 165 166 119 81.0 1e-27 MHPRIAVRNARKLVNLNKKEEDIILKHMWGATIAPPKYKESYIVTMVDKYWAVKEAVTPL RNRIKDTKFFRRKTLQSKHN >gi|311100385|gb|AEKO01000009.1| GENE 3 1327 - 2064 216 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 64 245 52 242 255 87 29 2e-16 MEVIQSKQNASIKTAKKLLQRKHRKTSYLIEGWHLFEEAKVSGAHILQIFVLEEMADRVA NMSKVKLVSPEVLKELCETQTPQGIVAEVAKQTQALPDSLSGKYLLLEDVQDPGNVGTMI RTADAADYDGVFLSDKSADIYNQKTLRSMQGSHFHLPIYRGPILEMVETCKKQDLPVLAT TLSEVSVDYKAVKTDGNFALVMGNEGQGISKEMAESANQLVHINMPGQAESLNVAVAAGI LMFSL >gi|311100385|gb|AEKO01000009.1| GENE 4 2167 - 2445 307 92 aa, chain + ## HITS:1 COG:SPy0352 KEGG:ns NR:ns ## COG: SPy0352 COG1254 # Protein_GI_number: 15674506 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Streptococcus pyogenes M1 GAS # 1 91 1 91 92 146 76.0 8e-36 MQKVRLLVSGRVQGVGFRYSTYTLALEIGDIYGRVWNNDNGTVEILAQSDKPAKLAKFIQ EVRKGPSKWSNVTYVDVTMANFSNYCDFRMAN >gi|311100385|gb|AEKO01000009.1| GENE 5 2562 - 3449 799 295 aa, chain + ## HITS:1 COG:SPy0351 KEGG:ns NR:ns ## COG: SPy0351 COG0706 # Protein_GI_number: 15674505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Streptococcus pyogenes M1 GAS # 2 295 12 307 307 341 60.0 1e-93 MGLAASMLLFLSGCVSLDKSGNPTGWVWNLLGRPMSHVITYFANNLGLGFGLGIIFVTII VRLIILPLGLHQSRSAAYQSAKREYLAPILEPINERLRNAKTQEEKLAAQSELMQAQREN GLSLMGGVGCLPLLIQFPFFSALYYAARYTPGVLKDDFLWFNLGHRDFPLIIIIAALYYF QSWLSVQQVPEEQRKQMAATMYSMPIMMIFFGISSPAAVILYWFVGGIFSIIQQLITNYI IKPRLKEKVAEEFKKNPPKAPRTTPNKRKDVTPKNTQAIANKPQKNRNAGKQNRK >gi|311100385|gb|AEKO01000009.1| GENE 6 3851 - 4108 189 85 aa, chain - ## HITS:1 COG:SP1485 KEGG:ns NR:ns ## COG: SP1485 COG2801 # Protein_GI_number: 15901334 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 85 76 160 277 124 76.0 4e-29 MKALGLSARIRQKRKYSSYQGEVGKKAENLIQRQFEASKPMGKCYTDATEFTIPASNQKL YLSPVLDGFNSEIIAYNLSTSLNLK >gi|311100385|gb|AEKO01000009.1| GENE 7 4108 - 4353 142 81 aa, chain - ## HITS:1 COG:no KEGG:SPH_1455 NR:ns ## KEGG: SPH_1455 # Name: not_defined # Def: integrase core subunit # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 31 78 1 48 279 70 77.0 1e-11 MYRGGLPKKVKRARRQGRSLTARKSEIIREIVTRGFRLDLLLETDGLARSTYYYQVKRLG GLDKDKELKAEIQDIFTECNV >gi|311100385|gb|AEKO01000009.1| GENE 8 4272 - 4427 85 51 aa, chain - ## HITS:1 COG:no KEGG:SPCG_0026 NR:ns ## KEGG: SPCG_0026 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 51 122 172 183 61 88.0 8e-09 MGRKRKKTWEEIPELERLQEENERLCTEVAYLKKLKELEGRDEALQRESQR >gi|311100385|gb|AEKO01000009.1| GENE 9 4740 - 5222 729 160 aa, chain - ## HITS:1 COG:SPy0349 KEGG:ns NR:ns ## COG: SPy0349 COG0782 # Protein_GI_number: 15674504 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Streptococcus pyogenes M1 GAS # 1 159 17 175 176 211 88.0 5e-55 MAEKTYVMTLAEKEQLEAELEEYKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFV EGQIQILETKIRYAEIVDSDAVANDEVAIGKTVVVQEVGTSDKDTYHIVGAAGADIFSGK ISNESPIAQALIGKKVGDKVAIESPAGSYSVEILSVEKTA >gi|311100385|gb|AEKO01000009.1| GENE 10 5306 - 7279 1535 657 aa, chain - ## HITS:1 COG:SPy0348 KEGG:ns NR:ns ## COG: SPy0348 COG1559 # Protein_GI_number: 15674503 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Streptococcus pyogenes M1 GAS # 236 655 106 524 524 381 51.0 1e-105 MTDKYNEHSESAEDSLSFKNQILRDLQEATRLRSLREEEHKKSATMPETPLSMSADSHAI DSGSASNKVSNQNLSSHSVAHSAIVKTMTSETARDFQDSVDLSSNSQADSLAPNVHSNVI SSPKEQVDKEKNLIIPQETEMLKRRFKRPVWETSLNAESEEEYIPADVAKELIEAKAKES IYTNPKELVSKMTSERQKEAFLQEHHTASNHSEPVRVQSDLVTDDNESDESIALAASEKA NKKKRKKVKKKESSLKDVKQDEIINEEPISRSNRNQKRNKNNRRAGRIARNIIVLLILIL SLAGFFGYRYVSDAVGAKDVKSTKFISVEIPENSGNSYIGQLLESAGVIKSGKVFNYYTK FKNISNLKSGYYNLQPSMTMDEIIEALQKKGSDKPQEPSLGTVLVKEGYTIEQIAKAVEV NSSAKKGKHSSTGLKAKDFLKLMKDDVFLTKMKAKYPALLANLPKDTDAKYVLEGYLFPA TYNIHDDTTVESLAEEMLSTMDTYLSPYYATISSSDHNVNEILTLASLVEKEGATDDDRK NIASVFYNRLDSDIALQSNIAVLYALGKLGQETTLKEDATIDTNIDSLYNDYVHKGLMPG PVDSPSLSAIEAVINPSSTKYMYFVADVSTGNVYFAESYEEHQHNVETYINSKLKDK >gi|311100385|gb|AEKO01000009.1| GENE 11 7379 - 7870 486 163 aa, chain - ## HITS:1 COG:SPy0346 KEGG:ns NR:ns ## COG: SPy0346 COG0454 # Protein_GI_number: 15674502 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 159 1 159 160 197 57.0 7e-51 MIIRHARTNDWTDVVRIEQDNFSPEEAATPEAIAERLETICDTFLIAEIDGTVAGYIEGP VIAERYLTDDLFHKVAPNVSQGGYIAVTSLSISKDFKGQGVGTSLIAALKDLAIAQKRQG ISLTCHDYLITYYEMNGFIDEGESKSNHGGSIWYNMVWENPEG >gi|311100385|gb|AEKO01000009.1| GENE 12 7931 - 9259 1492 442 aa, chain - ## HITS:1 COG:SP1521 KEGG:ns NR:ns ## COG: SP1521 COG0773 # Protein_GI_number: 15901367 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Streptococcus pneumoniae TIGR4 # 1 442 1 443 444 713 81.0 0 MSKTYHFIGIKGSGMSALALMLHQMGHKVQGSDVEKYYFTQRGLEQAGIPILPFDEKNIT EDVELIAGNAFREDNNVEIAYAIKNGYKFKRYHEFLGHFMNQFTSFGVAGAHGKTSTTGL LSHAMKNITDTSYLIGDGTGRGSANAQYFVFEADEYERHFMPYHPAYSIITNIDFDHPDY FTSIDDVFSAFDDYAKQVQKGLFVYGEDSNLRKITSNAPIYYYGFEENDDFMATEIVRTT TGSNFNVKHDGQIIGKFHVPAYGRHNILNATAVIANLYVAGFDMALVAEHLKTFSGVKRR FTEKVISDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAEA LNEADAVYLAQIYGSAREVDHGDVKVEDLAAKINKPAKVVTVENVSPLLDHDNAVYVFMG AGDIQLYERSFEELLASLQTHM >gi|311100385|gb|AEKO01000009.1| GENE 13 9286 - 10002 690 238 aa, chain - ## HITS:1 COG:no KEGG:str0238 NR:ns ## KEGG: str0238 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 238 1 238 238 381 94.0 1e-104 MHRQRRQFPLIPDGESCLQEPISMRLYENEDLITNIRGPYQDKDYNDFLLNHEFLSAKAH KRKQAPNRAETQEDGMTYAEEAREKAKRDVRDKRQKYLRQEVQSTKSTNIRSLAAKPKVE NKPSFEATVEAVAVTTDKEPVTASILEAPVSAIKRTLAPNGKHSKIHHLANRLKQDTYIL AEVVPTYQQPSNPSRKNVKKNSYDFLKRSQVYNYPERQAYREHRIAQELNLTHLEDAN >gi|311100385|gb|AEKO01000009.1| GENE 14 10157 - 13252 2467 1031 aa, chain - ## HITS:1 COG:SPy0342 KEGG:ns NR:ns ## COG: SPy0342 COG0553 # Protein_GI_number: 15674499 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Streptococcus pyogenes M1 GAS # 1 1028 2 1029 1032 1209 58.0 0 MAKLMPGRVRNEGIKLFEKGLIAIHQVSETQLDTTVGQHHLIYALDDSEITCDCDYFAQK GYCPHLAAVEYYLKNDKEGQRLLAELEEEQELSQGQERGHSFGGLFLEGLSLNEDDTVRY SLMVEGEESTFGSEIWWSIRLRRLPDERSYVIRDIPAFLKLVEAEGYYQIGKNYYELLSL IQFDQASQAFLNYLGRMIPDEAKTNLDFILPNNARHLCLPYGFFEEGLRRMQDLDGFRFE WEGTEYRQLLVEDLTADANLFSFDICVEPKMIELTVSEKNSQAFFNNRILFYQGVFYRLN RKQQKLLVGLRSLPIGSDLNKHVSFNLDEQAILAASLFDFKTMGPVKAPKAFNIKDFTPR FRFNLKGDSEIVLTLAFDFDGFLVHDRQELSRLGFTSNYRHEQAVFRLMSKHGFTPDFQS SKRLSSSQELYDFFTNTLPDFGNAGTVLIGQELRDLRVEQSPQVQVERQGNLLDISFDFS SLDDEDVDHALAALMESSPYFINRSGQLIVFDEATHRISESLKTLRARYSGKGHLELHQL TAYQLMDALSESDSVRFSKDFQLLTQHLSKPETFDLPTYKVEAGLRPYQEKGVQWLSMLH HYGFGGILADDMGLGKTLQTIAYLSAHLEEGQRVLVLSPSSLIYNWQDEFKKFAPQLDVA VSYGLKPKRDDIIAEDHQIIITSYASFRQDFDAYKSGKYDYLILDEAQVMKNTQTKIAQY LRDFSVPHCLALSGTPIENHLLEIWSIFQIILPGLLPAKKTFLKLTPKEVARYISPFILR RKKEEVLPDLPDLIEITHQSELSDAQKAIYLAQLQQMQQGLISASDQEINRHKVEILSGI TRLRQICDTPALFMDYAGDSGKLDSLRDLLSQIKESDHRVLIFSQFRGMLDITEELLQEV GISSYKLTGSTPSDSRQEMTKAFNQGSRDAFLISLKAGGVGLNLTGADTVILIDLWWNPA VEMQAISRAHRIGQEQNVEVFRLITRGTIEEKILELQEGKKNLVTTVLDGNESRASMTVE DIKEILGIAIS >gi|311100385|gb|AEKO01000009.1| GENE 15 13360 - 15225 1886 621 aa, chain - ## HITS:1 COG:no KEGG:str0235 NR:ns ## KEGG: str0235 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 620 1 620 620 878 91.0 0 MSEDKTQDGYEESQELDFQDAKEMTVGEAVRKEAEINAGVTETDSILDKYIKQHREEVTS QKFSKKIEADGDTSPLDAFIQKQRQEFADSGLIGQSMANEATNSTTADETVTPMTFGLDT TDAKEDDTQASVEPEITVKPESQSSETIITSTNADRFITSEAEKFDLGEALAATSRSTNQ QVDNADMVDNIDDPEPESTLPADDKASEPQDSKPLLEDVEVSETIDLEAIATTVAGVTGV KADEAKAIPKVSMTVNRPSAEDRISSGSISQSHKGFFDGDIPLYRRKGVVIVALVVLALA IIGGSYALYKGTHSQSAKTTSTASSAVIPSSSKDASASDNKAFEDMYKNFFTDDEQTKLA NDQFGKLSDLEKLLKKLEKTKYYDAAKVKYDNLKKQIEAIEKVNSNYESDALVDGSYNAS ISVKSDANFNDLSERVTNTGNASLDSTIQEAIKGGKTQLEEKAKAASATSAATASESVNT ATPSGDNTSGASNSGVTSATGGVSGGTAATSTVVTRGIINYNPSILQRDRSRVPYNANVV ADTSNPAWTWANGVLDKIIATSHSRGYFSGDNFILEPVNIINGNGYYNMYLPDGTYLFSI NCKTGYYVGNGSGHSDKLDYE >gi|311100385|gb|AEKO01000009.1| GENE 16 15228 - 16394 1234 388 aa, chain - ## HITS:1 COG:SPy1644 KEGG:ns NR:ns ## COG: SPy1644 COG0116 # Protein_GI_number: 15675517 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Streptococcus pyogenes M1 GAS # 1 381 1 381 384 672 83.0 0 MKETFTLVATAAAGLEAVVGRELRELGYEIQVENGKVRFQGDVRAIAETNLWLRAADRIK IVVGEFPARTFEELFQGVYALDWENYLPLGAKFPISKAKCVKSKLHNEPSVQAISKKAVV KKLQKYFHRPEGVPLQETGAEFKIEVSILKDKATALIDTTGASLFKRGYRTDKGGAPIKE NMAAAILELSNWYPDKPLIDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWNWVDKDLV QSVRDEADSKANYDVELDIMGCDIDSRMVEIAKANAREAGLEDVVKLKQMRLQDLKTDKI NGVIISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDEQFESKYGMKADKKR KLYNGTLRVDLYQYFGERVRRSEARKVN >gi|311100385|gb|AEKO01000009.1| GENE 17 16927 - 17259 337 110 aa, chain - ## HITS:1 COG:SP0372 KEGG:ns NR:ns ## COG: SP0372 COG3599 # Protein_GI_number: 15900295 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Streptococcus pneumoniae TIGR4 # 1 110 1 105 109 98 54.0 3e-21 MAKINLTPKKIYEQEFKTSMRGYDKTEVDEFLDDVIKDYGVYIALVKELQEENAKLKAKE TSAPARRPAYASATSEPPYATANIASASNYDILKRISRLEKEVFGKQIVE >gi|311100385|gb|AEKO01000009.1| GENE 18 17368 - 17883 393 171 aa, chain - ## HITS:1 COG:L131937 KEGG:ns NR:ns ## COG: L131937 COG4474 # Protein_GI_number: 15672527 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 171 1 171 174 203 60.0 1e-52 MTSLLITGYKSFELGVFKDKDPKVNIIKKAIKRDLKRFLDEGVDWMIFTGNLGFEFWALE VAKELQKDYPLKLATLFPFETHGQNWNEANQAKLAAFKQVDFVKYSFPAYQSPAQFKQFN QFLIDNTDQAYLFYEPENETNLKYFYNMIIDASDYPLFRLTFDDLNEVMSE >gi|311100385|gb|AEKO01000009.1| GENE 19 17961 - 18557 287 198 aa, chain + ## HITS:1 COG:SPy1648 KEGG:ns NR:ns ## COG: SPy1648 COG3331 # Protein_GI_number: 15675520 # Func_class: R General function prediction only # Function: Penicillin-binding protein-related factor A, putative recombinase # Organism: Streptococcus pyogenes M1 GAS # 1 197 1 197 199 299 76.0 3e-81 MVNYPHQISRKIAQVRTKKSNRVDFANRGMNFESAINATNDYYLSRGLAVIHKKPTPVQI VKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTSMPMKNFHAHQIEH MSQVINQDGICFVLLHFSTLKETYLLPAKDLIAFYRIDKGTKSMPLDYIKKRGYAIAEAA YPQVPYLEIIEKLLGGNT >gi|311100385|gb|AEKO01000009.1| GENE 20 18557 - 20848 2390 763 aa, chain + ## HITS:1 COG:SPy1649 KEGG:ns NR:ns ## COG: SPy1649 COG0744 # Protein_GI_number: 15675521 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 73 709 35 672 721 730 62.0 0 MAKFNFSNFKESLSGLTKRTKNTHVKRSDSSRYSKGKRSSASDQSLGWRIVKYGFIGLLT FFVICVIAGGGLFAYYVSSVPKLTENKLQSTNSSKIYDGNGSLIADLGSEKRESASTDEI PTTLVNAITSIEDKRFFTHRGIDVYRIMGAAVNNLRHNSTQGGSTLDQQLIKLAYFSTNT SDQTLKRKSQEIWLSLQMERQYTKQEILTFYVNKVYMGNGYYGMKTAAKSYFGKELGDLS VAQAALLAGIPQAPTQYDPYTNPDAAKERRNTVLNEMYEDKNISKEEYEQAKATDVSDGL LPLTKKASYEPYLDNYIKQVVEQVSTEANADIYSAGLDVYTNLDPDIQKYIWNVYNSNDY IAYPDDKLQVASTIIDVTNGHVVAQLGSRHQDENIALGTNQAVQTDRDWGSTMKPITDYA PAIEKRVYTNTGTTVYDNPYNFPGTSTPVYDWDHKYYGSISLTYAIQQSRNITAVKALQA TGLEYAQSFLKDLGIEYPEMFYSNAISSSTTSSDPKYGASSEKMAAAYAAFANGGTYYKP SYIKSIKFEDGSTKSYDSKGVKAMSPQTAYMMNSMLKQVLTGGTATEAYVPGTINAGKTG TSNYGDDEYYQVQKESGVYADLMVPDETFVGYNTKYAMAIWTGYKNRKTPLYGSDLDIAK QIYGLTSSYLNQMYGAGSEDFDMPSGVYNNGSYVFLTGSSTSNVYTGSLGTSSSSSSSDY GKSSDSSSSQDSQQYGPDASTNPSTSGSNGAEHSNSNTSTVDE >gi|311100385|gb|AEKO01000009.1| GENE 21 20957 - 22294 1480 445 aa, chain - ## HITS:1 COG:SPy1651 KEGG:ns NR:ns ## COG: SPy1651 COG3579 # Protein_GI_number: 15675522 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Streptococcus pyogenes M1 GAS # 1 443 1 443 445 762 85.0 0 MTSLSTDFTEKLFADYEANAKYGAIENAVTHNGLLKSIETRQSEVENDHVFSIDLTKDAV SNQKASGRCWMFAALNTFRHKLISDFKLESFELSQAHTFFWDKYEKSNWFLEQIIATADQ EIGSRKVKFLLDTPQQDGGQWDMVVSIFEKYGVVPKSVYPESVASSNSRELNQYLNKLLR QDAQILRDLIASGADQAAVQAKKEQLLQEIFNYLAMTLGLPPRQFDFAYRDKDDNYQSEK DITPQAFFEKYVGLKLSDYVSVINAPTADKPYGKSYTVEMLGNVVGAPSVRYINLPMDRF KDLAIAQMKAGETVWFGSDVGQVSDRQKGILATNVYDFTASMDINLTQDKAGRLDYSESL MTHAMVLTGVDLDADGKPIKWKVENSWGDKVGQKGYFVASDAWMDEYTYQIVVRKDFLTA EELAAYEAEPQILAPWDPMGALASK >gi|311100385|gb|AEKO01000009.1| GENE 22 22396 - 22836 350 146 aa, chain - ## HITS:1 COG:L85895 KEGG:ns NR:ns ## COG: L85895 COG3152 # Protein_GI_number: 15672845 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 135 1 160 173 70 34.0 1e-12 MIKAYIDFWKRAFDFRGRSTRPDYWWVYLINVIINTILVVGFVLIPFFSSVSNDPAILYD SAEIQKMILKHMSPIIIFGLIILIPQLSLQFRRLRDAGIHPAWGLLSCMGLIPVLNILSP IGSIVLIIMSCQPTKPAPETSFDKVK >gi|311100385|gb|AEKO01000009.1| GENE 23 22852 - 23673 1151 273 aa, chain - ## HITS:1 COG:SP1420 KEGG:ns NR:ns ## COG: SP1420 COG0171 # Protein_GI_number: 15901273 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 273 1 274 274 431 78.0 1e-121 MTLQETIIDQLGVKPNIDPKEEIRKSVDFLKAYMLKHPFLKSYVLGISGGQDSTLAGRLA QLAVEELRAETGKNYQFIAIRLPYGVQADEDDAQRALAFIKPDVSLAVNIKEAVDGQVAE LAKAGVTVSDFNKGNIKARQRMITQYAVAGENSGAVIGTDHAAENLTGFFTKFGDGGADI LPLFRLNKRQGAALLAELGADKALYEKVPTADLEEDKPGIADEVALGVTYREIDDYLEGK EVSAKAQETIENWWRKGQHKRHLPITIFDDFWK >gi|311100385|gb|AEKO01000009.1| GENE 24 23685 - 25139 1283 484 aa, chain - ## HITS:1 COG:SPy1653 KEGG:ns NR:ns ## COG: SPy1653 COG1488 # Protein_GI_number: 15675524 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 484 1 484 484 811 82.0 0 MYKDDSLTLHTDLYQINMMQVYFNQGIHNKKAVFEVFFRQLPFKNGFAVFAGLERIVNYL ENLTFSETDIAYLKDLGYPADFLDYLANLKLGLTINSSLEGDLVFANEPIFQVEGPLAQC QLVETALLNIINYQTLIATKAARIRSVIGDAPLLEFGTRRAQEMDAAIWGTRAAVIGGAD ATSNVRAGKIFGIPVSGTHAHALVQAYGNDYDAFKAYASTHKDCVFLVDTYDTLKIGVPN AIRVAKELGDKINFLGVRLDSGDLAYLSKQVRKQLDAAGFPNAKIYASNDLDENTILNLK MQKAKIDVWGVGTKLITAYDQPALGAVYKIVSIEDDQGVMHDTIKLSNNAEKVSTPGKKQ VWRITSRAKGKSEGDYITFAGTDVNALEEINMFHPTYTYINKTVRDFDAVPLLVPIYDKG QLIYDLPSLDEIKNYATKELDELWNEYKRVLNPQDYPVDLAKDVWDNKMALIDNVRKKAH NFPE >gi|311100385|gb|AEKO01000009.1| GENE 25 25324 - 25614 58 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262282586|ref|ZP_06060354.1| ## NR: gi|262282586|ref|ZP_06060354.1| LOW QUALITY PROTEIN: transposase [Streptococcus sp. 2_1_36FAA] # 24 69 5 50 81 71 86.0 2e-11 MLGSDKHHICLKGTNINDLYSSYHKRACELVMIEAYYQENIKVSAIVTSLGRSKQTIYNV INYMKEGHSAIKSIRNAVAGIKPVLRKQKKILSKLI >gi|311100385|gb|AEKO01000009.1| GENE 26 25674 - 25985 61 103 aa, chain + ## HITS:1 COG:no KEGG:MCCL_plsB0035 NR:ns ## KEGG: MCCL_plsB0035 # Name: not_defined # Def: truncated integrase # Organism: M.caseolyticus # Pathway: not_defined # 1 102 75 176 289 118 56.0 5e-26 MRTLYRLADRGILKKEDLPWKGKRKPNDHSEKRGKQALRRDLRERADSYPNFKTEFGHLE GDTIVGEKHKSAVITLVERCSKAIITLKTNGRKASDIEASINQ >gi|311100385|gb|AEKO01000009.1| GENE 27 26886 - 28346 1566 486 aa, chain + ## HITS:1 COG:SP2038 KEGG:ns NR:ns ## COG: SP2038 COG3037 # Protein_GI_number: 15901859 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 485 1 484 485 735 82.0 0 MSVIMAILNWFSLNILQQPAFFVGLLVLVGYILLKKPWHDVFSGFVKATVGYLILNVGAG GLVSTFRPILAALNYKFNIGAAVIDPYFGLTAANTKIAEDFPKFVGTATTALLIGFFLNI FLVAFRKVTKIRTLFITGHIMVQQAATVTLMVLILIPALRNQLWGTLAIGVVCGLYWAVS SNMTVEATQRLTGGGGFAIGHQQQFAIWFVDKVAGKIGKKEDNLDNLKLPAFLNIFHDTV VASATLMLIFFGIILYILGPDIMSNSKVITSGTLYNPASQSFFMYVIQTAFTFSVYLFVL MQGVRMFVSELTNAFQGISAKLLPGSFPAVDVAASYGFGSASATLFGFSMGLIGQLVTIV LLIIFKNPVLIITGFVPVFFDNAAIAVYADKRGGWKAAVLLSFISGVIQVAIGAIAVSLL GLASYGGYHGNIDFDIPWVPFAYIFNYVGVIGFIIVCVFLLVIPQLQFAKAKDKEAYYRG DVQLED >gi|311100385|gb|AEKO01000009.1| GENE 28 28399 - 28680 402 93 aa, chain + ## HITS:1 COG:SPy0175 KEGG:ns NR:ns ## COG: SPy0175 COG3414 # Protein_GI_number: 15674380 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Streptococcus pyogenes M1 GAS # 1 92 1 92 92 143 90.0 6e-35 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASGYDIVVASNHL IHELDDRTNGKLIGLDNLMDDNEIKTKLGAALK >gi|311100385|gb|AEKO01000009.1| GENE 29 28754 - 29239 634 161 aa, chain + ## HITS:1 COG:SP2036 KEGG:ns NR:ns ## COG: SP2036 COG1762 # Protein_GI_number: 15901857 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Streptococcus pneumoniae TIGR4 # 1 161 1 161 161 250 81.0 6e-67 MNLKQALQENNSIRLGLTAKDWKEAVKLSVEPLIESGAVKPEYYDAIIESTEQYGPYYIL MPGMAMPHARPEAGVQRDAFSLITLTEPIQFSDGKDVSVLLALAATSSKIHTSVAIPQII ALFELENSVERLKACKTADEVLAMIDESKNSPYLEGLDLDS >gi|311100385|gb|AEKO01000009.1| GENE 30 29390 - 30055 778 221 aa, chain + ## HITS:1 COG:SP2035 KEGG:ns NR:ns ## COG: SP2035 COG0269 # Protein_GI_number: 15901856 # Func_class: G Carbohydrate transport and metabolism # Function: 3-hexulose-6-phosphate synthase and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 221 1 221 221 395 92.0 1e-110 MTKQLPNLQVALDHSDLQGAIKAAVSVGAEVDIIEAGTVCLLQVGSELVEVLRSLFPDKW IVADTKCADAGGTVAANNAKRGADWMTCICCATIPTMKAALKAIKEERGDRGEIQIELYG DWTFEQAQQWLDAGISQAIYHQSRDALLAGEAWGEKDLNKVKKLIDMGFRVSVTGGLSVD TLKLFEGVDVFTFIAGRGITEAQDPAAAARAFKDEIKRIWG >gi|311100385|gb|AEKO01000009.1| GENE 31 30059 - 30922 675 287 aa, chain + ## HITS:1 COG:SPy0178 KEGG:ns NR:ns ## COG: SPy0178 COG3623 # Protein_GI_number: 15674383 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 286 287 517 83.0 1e-147 MTRPIGIYEKATPKHFNWLERLNFAKELGFDFVELSIDESDERLARLEWSKEERLDLVKA IFETGVRIPTITFSGHRRFPMGSSDPEKEARAMDMMKKCIVFAQDIGVRNIQLAGYDVYY EEKTPETRARFIRNLRQACTWAEETQVILSIEIMDDPFINSIEKYLAVEKEIDSPYLFVY PDTGNVSAWHNDLWSEFYNGHRSIAALHLKDTYAVTENSKGQFRDVPFGKGCVDWETMFD ILKKTNYNGPFLIEMWSENCETVEETRAAIKEAQDFLYPLIEKAGLR >gi|311100385|gb|AEKO01000009.1| GENE 32 30922 - 31632 841 236 aa, chain + ## HITS:1 COG:SPy0179 KEGG:ns NR:ns ## COG: SPy0179 COG0235 # Protein_GI_number: 15674384 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Streptococcus pyogenes M1 GAS # 5 232 7 234 234 355 75.0 5e-98 MLVPELRERVYKANMELPDHGLVKFTWGNVSAIDREKGLIAIKPSGVSYDKLSPENMVVT DLDGNIVEGDLNPSSDLPTHVELYKAFSEVGGIVHTHSTEGVAWAQAGRDIPCYGTTHAD TFYGAIPCARALTPEEINGEYEKETGKVIIEEFEKRGLNPMAVEGVTVRNHGPFAWGKDE KAAVYNAVVLEEAARMARYTESINPDVEEVPQALKDKHYLRKHGKNAYYGQKGDSH >gi|311100385|gb|AEKO01000009.1| GENE 33 31667 - 32311 702 214 aa, chain + ## HITS:1 COG:SPy1678 KEGG:ns NR:ns ## COG: SPy1678 COG0176 # Protein_GI_number: 15675540 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Streptococcus pyogenes M1 GAS # 1 214 1 214 214 325 76.0 6e-89 MKYFLDTANVDEIRRLNALGIVDGVTTNPTIISREGRNFEEVIREICSIVDGPVSAEVTG LTRNEMVEEARSISKWADNVIIKVPMTEEGLAAVHILSKEGIKTNVTLIFTVSQGLSAMK AGATYISPFIGRLEDIGTDAYALIEDLRHIIDLYGFKSEIISASIRSLPHVEAVAKRGSH IATIPDTVFAKLFAHPLTDQGIETFLKDWESFKK >gi|311100385|gb|AEKO01000009.1| GENE 34 32666 - 34330 904 554 aa, chain + ## HITS:1 COG:SPy0181 KEGG:ns NR:ns ## COG: SPy0181 COG3711 # Protein_GI_number: 15674386 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pyogenes M1 GAS # 2 549 1 547 547 550 53.0 1e-156 MIILDKKSYALLSYLIKLDEPETVMTISKKLKQSRRKIYYHLEKINDALPTDVEQIISYS RVGIVLNVKQKAACRLLLKELDAYSYVMSINERMQLILLYIGVSDQRVTIEKLMQLTDVS RNTVLNDLNEVRQELSLEQYQIQLHVTKAQGYYLDCHPLSKIQFIYKLLYTLYTQGSEDF ITMVQDKIEQFTSFNRYFSKQKLDYLRQLLVKAKKDLGKQLNSQDSDFMFKILPYLLMSY RNMDITDEDREVFKQDFLLAQERIEYYIAEKLARDYQKKFQVTFDDVENCIIAMLLLSFR KDSDIHNDSHDYDEMRLTLGVFLDRFEKLYQVNFEHRDELLNQLLTHCKALLYRKTYGVL SVNLLTEQIMNKYEELFYMTKSCVSVLEEAWFIKMNDDDIAYLTIHLGGALRNSSAQTFK PTKVIIVCDEGIGVRKFLFKQCQAYLVRVQIDAVFTSEQFHSVKDILNSDVVISTSDGID SPLPMMVIHPVLTDDDIVKLIAFVRTHGQESQHDFSDELDHLIKNYIKEDSERYTLRSQI EKIFRQELLLDLRN >gi|311100385|gb|AEKO01000009.1| GENE 35 35054 - 36145 1118 363 aa, chain + ## HITS:1 COG:SPy0182 KEGG:ns NR:ns ## COG: SPy0182 COG2220 # Protein_GI_number: 15674387 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Streptococcus pyogenes M1 GAS # 1 363 1 363 363 689 85.0 0 MANVKDITRESWILNTFPEWGTWLNEEIEEEVVPENNVAMWWLGNCGVWFKTPGGANIVM DLWSNRGKHTKKVKDMVRGHQMANMAGVRKLQPNLRVQPMVIDPFAINELDYYLVSHFHS DHIDINTAAAIVNNPKLNHVKFVGPYECGEIWKGWGVPEERIIIVKPGDTITLKDVKITA VESFDRTCLVTLPVEGADAQDGELAGLAVTDEEMARKAVNYVFETPGGTIYHGADSHFSN YFAKHGKDFDVDVAINNYGDNPVGIQDKMTSIDLLRMAENLRAKVIIPVHYDIWSNFMAS TDEILALWKMRKERLQYKFHPFIWEVGGKYTYPQDKDLIEYHHPRGFDDCFEHDSNIQFK ALL >gi|311100385|gb|AEKO01000009.1| GENE 36 36427 - 38400 2024 657 aa, chain + ## HITS:1 COG:SP2030 KEGG:ns NR:ns ## COG: SP2030 COG0021 # Protein_GI_number: 15901851 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Streptococcus pneumoniae TIGR4 # 1 657 1 657 658 1066 78.0 0 MSDLSVNAIRFLGVDAIEKSKSGHPGIVMGAAPMAYSLYTKHLRVNPQVPNWINRDRFVL SAGHGSMLLYALLHLSGFKDVSIDEIKNFRQWGSKTPGHPEFSHTAGVDATTGPLGQGIS TAVGLAQAERFLAAKYNRDGFPIFDHYTYVICGDGDLMEGVSSEASSYAGKQNLDKLIVL YDSNDICLDGETNDAFTENVRVRYEAYGWHTILVEDGNDVNAISLAIEEAKTAGKPSLIE IKTVIGYGAPHKQGTNATHGAPLGAEETDATRENLGWGYAPFEVPKEVYADFRINVADRG EESYTTWTKLVEDYQVAYPELAFEVQAIVAGKVPLEVKEADFPVYEAGFSQATRNSSQDA INAAAAVLPTFLGGSADLAHSNMTYIKEDGLQDDAHRLNRNIQFGVREFAMGTILNGMAL HGGLRVFGGTFFVFSDYLKAAIRLSALQNLPVTYVFTHDSIAVGEDGPTHEPIEHLAGLR AIPNLNVFRPADARETQAAWQYALTNDSTPTVLVLTRQNLNVEVGSSFTGVSKGAYVVYE TGADFDTILLATGSEVNLAVKVAKELAAQGGKVRVVSVPSTDLFDAQDVTYKEEILPNKI RRRVAIEMAATQSWYKYVGLDGAVIGIDKFGASAPATQVIENYGFTVEHVLEIVKSL >gi|311100385|gb|AEKO01000009.1| GENE 37 38727 - 38945 137 72 aa, chain - ## HITS:1 COG:no KEGG:GYMC10_3007 NR:ns ## KEGG: GYMC10_3007 # Name: not_defined # Def: transcriptional regulator, LacI family # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 15 65 243 293 351 67 56.0 2e-10 MLIFPANDIQSHPELLEKSDYPTAFFCENDSIAISLIKSLQDIVMRIPEDISIIGFDNIS ESSIIKTRTYYY >gi|311100385|gb|AEKO01000009.1| GENE 38 39656 - 42613 2276 985 aa, chain - ## HITS:1 COG:SP0629 KEGG:ns NR:ns ## COG: SP0629 COG1876 # Protein_GI_number: 15900536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 725 907 56 238 238 217 61.0 7e-56 MNKVNYHHEKQRYSIRKYAFGAASVLIGCAYMANAQVAHADQTTAAPVAESTTTSTNVAP TQPATTVDTTTQSQPSTVAQTAPSTTESTTSTQPRASAVSDSVTPASSSTDVTKTVVVTY PDGSTDEVQVHYTVAGQTDADKNEPTVRTQTVRQGQTPTADSFITNKDSLPAGTTYSFKD DSALKTETPATTPTSTKPTETPVTTPTTTKPSDSETVKTPEKAETPTATTTKDDTSKEES KTPEEPVKDKVVKEVITGPELPASGRYTFTEKTAVYTTPSTNSSVSFYFNKGNQVNYDKV LDAENARWISYVSYSGIRRYAKVGELTKVLEEVTEPESTETSKNRKPQSATGTYVFQDTA QVRNDPKLSSPVQFEFRKGDRVNYDKVLTSDDYNWISYVSYSGIRRYVSLNKVEKATVDT PKTQTPQKEESKPATTTKSEASTLPANGTYIFTDKADVRNDAKISSPVQFEFRKGDRVNY DKVLTSDDYNWISYVSYSGTRRYVALNKVEKTSAETSQKEEAKSTTLMEEVKPSLPSSGK YTFTNTVEVHNEAKLSSPVQFEFKKGESVNYDKALVADDYSWISYVSYSGIRRYVALNKV GQDTPKAEATASKPSVVTGNIKVENVTAKGFDVVVSNVSDTQGVKAVKVPVWSSQGGQDD IIWYDATKQNSGDYKVAVKISDHKNNTGEYNAHLYYVQNDGSLKGIAATRTTVAGESTTE TTSNKVTSNGSYYSIKGKYDDIIIANKKYPLSPSYNPGEDATAKAAFVRLRNDMINQGFN VGHAYSGFRSYDTQKTLYQNYANRDGYAAADRYSARAGYSEHQTGLAYDLTDRSGNLLED KTATDWLNNNAYKYGFVVRYQPGKESVTGYMPEAWHIRYIGKEAKEVYESGKSLEEYFGF DGGDYTNTTSSSTANTSTTTSLTQRGTYHFTSRSSIKAEPKVSSPELAYYDAGNSVNYDK VLTADGHQWISYIAYSGSRRYIAVS >gi|311100385|gb|AEKO01000009.1| GENE 39 42668 - 43291 417 207 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|228477879|ref|ZP_04062493.1| ## NR: gi|228477879|ref|ZP_04062493.1| hypothetical protein STRSA0001_0590 [Streptococcus salivarius SK126] # 1 207 1 185 185 84 36.0 4e-15 MKKTIKIVTSLILAVLVILLAFVLLKGCGSSKVDKSGFYSKDTKTSKMSSSSSKSLTKSS SKKSSSSSSSTQVDSSTEAKSSEASVASSAASSATTTAPKQAQAQTPSQPVPSQGNSANQ AGTTTSESDPKTGYGGWEATSGTLTLTQDTPVYTEPNKDGGVAYVQPQGDIQWDKYIFAN GDNWYSFVQKNRDQEVRFYIAYSDVGH >gi|311100385|gb|AEKO01000009.1| GENE 40 43301 - 43687 396 128 aa, chain - ## HITS:1 COG:SPy0031 KEGG:ns NR:ns ## COG: SPy0031 COG3942 # Protein_GI_number: 15674273 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 68 127 197 256 374 59 43.0 2e-09 MKKLFWMTRSQRFSIRKYSIGVASTVQETTVTQEVAQATKGTEDSLNNSAVSEDSHGNVE TTNIDSSTNTSNNVTHASIKAEPKMSSPELAYYDTGDGVNYDKVLLSDGHYWISYIAASG NRRYISVA >gi|311100385|gb|AEKO01000009.1| GENE 41 44171 - 44905 334 244 aa, chain - ## HITS:1 COG:no KEGG:SZO_07700 NR:ns ## KEGG: SZO_07700 # Name: not_defined # Def: lantibiotic ABC transporter protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 243 1 243 244 300 72.0 2e-80 MRPYVFAEWKKTRKLQLFMIGMAFLIFSSFIGLGVYFANRAVLIDKTQSLVLWGQLTFYN STLLYPPMLAIIVGQLLMPEFERKNIEMLKANQVSMDKLYFGKLLSGFFLILSVQLFLLL IFVVAAKVDGISFDLSLAVHIKWLLLSVVASFPIMTLQSFVTAKTRNFSKAVGVATIGSM LNFVLIFINENLTKFFPYSQPMIALRSRSLTDMSLIDLTIFLVVNSLYSLLFYKLTVAAL KKNE >gi|311100385|gb|AEKO01000009.1| GENE 42 44907 - 45650 455 247 aa, chain - ## HITS:1 COG:no KEGG:SZO_07690 NR:ns ## KEGG: SZO_07690 # Name: not_defined # Def: lantibiotic ABC transporter protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 247 1 248 248 281 68.0 1e-74 MKGVYIEWLKSRRTKSFSIVTLLMIVATLWSIAMFMSVFSHPELKNVGTLFSNQNVNLLM LPIAVSVFVSRIVSNEREGQTFKLQATNGLGLMTIFRHKFLFTMVFFFVMSFAEIVAICC FGKQSGISIPMDIVGVQFLGQLLSIFALVSIYLTLAMVLEKQGVLLALGLLGGFLGIVLN PRSYGFASLLNPLTGAGSLAPYKYHFLGDGAYTYLLDQQLPWKLVFFMIYCLMLYGLANV ILRKRGS >gi|311100385|gb|AEKO01000009.1| GENE 43 45652 - 46560 260 302 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 301 1 304 311 104 27 2e-21 MNNIIELKNLKKVYKDTTTVDLKKLTVREGEIYGFLGPNGAGKTTTMKMILSLVEPTLGE ILVNGQNIKENKDYLNQIGSMIEEPSYYPNLTGYENLLVFQKMVGFDEDNIWPTLKLVGL AEDKNRKKLVKAYSLGMKQRLALAFALVKKPQILLLDEPTNGLDPAGIHEIRELIVKLAK EEGLTVFISSHILSEIEQIADRVGIINHGCLVYEGEIREIKSNTWIEIGGDFSQNNIVQH LVDFGSVRVREASASEVKLDDMSNDRLADIITYITDLGFRIFRVTRESETLEDIFLELTK EV >gi|311100385|gb|AEKO01000009.1| GENE 44 46813 - 47511 428 232 aa, chain + ## HITS:1 COG:BS_yvrH KEGG:ns NR:ns ## COG: BS_yvrH COG0745 # Protein_GI_number: 16080375 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 9 231 135 361 369 160 37.0 2e-39 MNFEAQLLNKRILIVDDDVSLSKSIKEVLVSRGFKNISNAYSISEGIDIFSISKIDLIIL DVMLPDGEGYLLAQYIRETSDIPILFLTAKNNPDDEVKGLDSGGDDFVTKPFLPKTLIYR IIALLRRAYKGESELITLTSCIIDLNNASVKKEEQHLSLTPTEIQILRKLYTNKNYIVST EAICDTIWGIDSFGYEKSLMVHIRNIREKIELSPSKPRHLITVKGLGYKLVI >gi|311100385|gb|AEKO01000009.1| GENE 45 47528 - 48559 453 343 aa, chain + ## HITS:1 COG:CAC0290 KEGG:ns NR:ns ## COG: CAC0290 COG0642 # Protein_GI_number: 15893582 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 2 324 13 342 467 89 24.0 1e-17 MNIFKKGILKFILAFLTIIFIDFVLLVATTNFIRSQQSPIDIIQGVSSNITPSNGTYKVN QTAKKLIKKHNLWVMILDQKSGNEKFNIKKPKNIKTQFDYADVIKFSRYYLDDYPIFTQI KKEQKDIYIIAFPKESIIRYGNNFFDLKRIQIFPILILVIIFVNCLFCLFLYLYSVTFLN RNIQPIINAIGKLPVGLNKQVNSVQELDRLTLAVNSANKKLRKNEEFKENWISGIAHDIK TPLSVIVANASLAIEKTDNDDLLKNLKPTLIESHYIQNLLNDLNIFARLTNGNLKLNQEI TDIIPFFKEIIIQIINQEIWNDFNFEFIPDNKLLGKKCTLKNL >gi|311100385|gb|AEKO01000009.1| GENE 46 48538 - 48891 233 117 aa, chain + ## HITS:1 COG:MA2256_2 KEGG:ns NR:ns ## COG: MA2256_2 COG0642 # Protein_GI_number: 20091095 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Methanosarcina acetivorans str.C2A # 1 113 171 284 345 62 30.0 3e-10 MYIEKSLMSRVIHNLIYNSVLHNPSGCNIQIVLNYISRNKFSVIIRDNGIGTSTDRLKNI NKIEEFNFDISGVRRSGMGLKISNQIVDLHGGSMIITSEQGEYFQTEIILPIESPTL >gi|311100385|gb|AEKO01000009.1| GENE 47 49520 - 49933 146 137 aa, chain - ## HITS:1 COG:no KEGG:SGO_0335 NR:ns ## KEGG: SGO_0335 # Name: not_defined # Def: hypothetical protein # Organism: S.gordonii # Pathway: not_defined # 1 137 1 137 137 107 56.0 2e-22 METISIGLTVYFEDGFWHGLFEQVYLETYQVCRVTFGQEPKDDEILEILQTQFTQLSFSP EAIVKQHVKVKNPKRLQRMVKKQVNQKVSSKSKELLQLQYEERKKISKHQSSVQKQLLKQ EKFERKQQKRREKHKGH >gi|311100385|gb|AEKO01000009.1| GENE 48 49828 - 50067 92 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSHDKLDKFLDTLVRTNHAKIHLQNKLSIQLKLFPRQHLLKSIPKNGQPRRKVTDRLAYV WTTNQNCVFILVGTIIAYL >gi|311100385|gb|AEKO01000009.1| GENE 49 50075 - 51307 704 410 aa, chain - ## HITS:1 COG:CAC3407 KEGG:ns NR:ns ## COG: CAC3407 COG1073 # Protein_GI_number: 15896648 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 2 405 3 430 431 164 26.0 3e-40 MNIQIELISESELADESFNIVINGLKPRETYRVEMYLTDYYCINAPMLLAHDVLWRSTGA FVSDKNGIIDMSQTPSCSGSYEGISTMGLFFNAKPLTNERKKLPNSLSEIPLLAHFFVDI KIMQGNTVIEERTFTRHYMSSQISHKDIYGEHFQGRLFYDKKSLKAPALIIVSGSEGRIE KAQNIAQILSSRGYICLAVAFFGLEGLPKYLERIPLECLAEAKDYLRQHPQVDSERIGIY GRSKGAELVLAEESLFNDVQCLVLNSPSDVVYEGIEGKWNSHTSSWTHLQKELPYQKFRL RDYLFSKLFRKPIPKDCSARIDISKLSSPILLLGSTVDEIWDDSSAIDDIVSHYKGHHIT FKKYHETGHMLTVTYQPNHRYRKDWRLLMKESKDSWLATIHFFDRHLKKQ >gi|311100385|gb|AEKO01000009.1| GENE 50 51532 - 51819 269 95 aa, chain - ## HITS:1 COG:no KEGG:STER_0270 NR:ns ## KEGG: STER_0270 # Name: not_defined # Def: transcriptional regulator # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 43 92 1 50 113 74 86.0 1e-12 MNKKELHKFNNRFNSFALAFERLKKNQHRNSIDKSITINEVHLIDLIGWNQPVNLVKLSE LLEVSRSAITQSVRRLTKKDLVAFEFAQDNEKINI >gi|311100385|gb|AEKO01000009.1| GENE 51 52085 - 54586 3193 833 aa, chain - ## HITS:1 COG:SP0254 KEGG:ns NR:ns ## COG: SP0254 COG0495 # Protein_GI_number: 15900189 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 833 1 833 833 1615 96.0 0 MSFYNHKEIEPKWQKYWADNHTFKTGTEASKPKFYALDMFPYPSGAGLHVGHPEGYTATD ILSRFKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYD WDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERG GYPVVRKPMRQWMLKITAYAERLLNDLDDLDWPESIKDMQRNWIGKSTGANVTFKVKGTD KEFTVFTTRPDTLFGATFTVLAPEHDLVDAITTPGQAEAVSDYKHQASLKSDLARTDLAK DKTGVWTGAYAVNPVNGKEIPIWIADYVLASYGTGAVMAVPAHDERDWEFAKQFDLPIVE VLEGGNVEEAAYTEDGLHVNSDFLNGLNKEEAIAKIVAWLEEKGFGQEKITYRLRDWLFS RQRYWGEPIPIIHWEDGTSTAVPESELPLVLPVTKDIRPSGTGESPLANLTDWLEVTRED GVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLL YARFWHKFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHVET GEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKF LDRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIELMKFNTAIAQLMVFVNAANKEDK LYVDYAKGFIQLIAPFAPHLAEEIWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQIK GKVRAKLMVAKDLSREELQEVALANEKVKAEIDGKEIVKVISVPNKLVNIVVK >gi|311100385|gb|AEKO01000009.1| GENE 52 54760 - 55527 521 255 aa, chain + ## HITS:1 COG:BS_glcR KEGG:ns NR:ns ## COG: BS_glcR COG1349 # Protein_GI_number: 16080683 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus subtilis # 1 251 1 254 258 122 33.0 6e-28 MYQEQRLEKILTLLEERGNLSVKEMVDALGVSKDTVRRDFDCLSQRNLAQRTHGGILPVK NTTVLGFQERQKGLTEDKKKMAELALSLVKDQSLLFFDVSTLMLEVSQKLAKSVSVYSHS LDNALVLSGKEGIDFNLLGGRFYSKNRFYYSLHEAQLLQHLQFDLAFFGAASLSQGVVSY EDEEDVAVKQLAMQVARTKILIAESDKYEKHSKYILGKIEDFDYWITDKEPDPDLVEALK DKVTILYDGKDSDYE >gi|311100385|gb|AEKO01000009.1| GENE 53 55520 - 56329 679 269 aa, chain + ## HITS:1 COG:L41779 KEGG:ns NR:ns ## COG: L41779 COG0561 # Protein_GI_number: 15672226 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 1 267 1 265 270 136 31.0 4e-32 MSNIRLIISDIDGTILTSNHQVDEQLIEVMPELEKANIPFVLASARSPLGMQPIAHKLGL HDNPIACYNGALVLESDRTIIQHPVDKTEIQELLSYLSTDYPSVSVNIYSGKDWITNQLD KWSQLEGSITGESPIIKELQDTVADSEPPIHKLLLIDEPEVIQDLHQKLLSMDFPQTAFY LSKDNYLEVTAKHVSKEHALLEVAKYYDLPLEEVMTIGDNFNDSPMLALAGLGIAMGNAP EGVKETANLVTASNDEHGVAQAITEHVLK >gi|311100385|gb|AEKO01000009.1| GENE 54 56461 - 56952 298 163 aa, chain - ## HITS:1 COG:SPy1836 KEGG:ns NR:ns ## COG: SPy1836 COG0671 # Protein_GI_number: 15675663 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Streptococcus pyogenes M1 GAS # 1 163 1 167 167 116 41.0 2e-26 MMMNYKQFYNRISGPLRPYARVLGGLNKAITRTFYLLFPIFISLVWLRNGWFVLSTTVLI MGGGFFLLSLGRSFYNRPRPYQTWDIQPLIKKDSLGKSFPSRHVFSATVIAMLALTLNPW LGGTMLFLAGALSLLRVLGGVHYPSDVLAGYVIGILVGLLLYL >gi|311100385|gb|AEKO01000009.1| GENE 55 57077 - 57616 796 179 aa, chain - ## HITS:1 COG:SPy0164 KEGG:ns NR:ns ## COG: SPy0164 COG0250 # Protein_GI_number: 15674369 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Streptococcus pyogenes M1 GAS # 1 179 1 179 179 317 93.0 1e-86 MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLENILRVEIPTQTVNVEKNGKVKEV EENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRSKPTPLLEEEIRQILISMGQT VDVFDTNIKVGDVVQIIDGAFMGQEGRVVEIENNKVKIMINMFGSETAAELELYQIAEL >gi|311100385|gb|AEKO01000009.1| GENE 56 58002 - 58154 252 50 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|55820311|ref|YP_138753.1| 50S ribosomal protein L33 [Streptococcus thermophilus LMG 18311] # 1 50 1 50 50 101 92 2e-20 MAQKKASLACAECGSRNYSINVSSTPKPTRLEVNKFCKHCKKYTLHKETR >gi|311100385|gb|AEKO01000009.1| GENE 57 58201 - 60528 2441 775 aa, chain - ## HITS:1 COG:SPy2059 KEGG:ns NR:ns ## COG: SPy2059 COG0744 # Protein_GI_number: 15675827 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Streptococcus pyogenes M1 GAS # 57 768 52 775 778 870 63.0 0 MTFFDNLKNKLFKEENSGKGKDSQPAEKSKNLQNKIKGLFAKKPDEVEQAVEDLDMSQES QETSRYQRSKQKKPIDTTKPLGKVQAFLSKFTLSPRNPIRRFWRRYHIGKILFIMLAVLV LTVGSYLFYIAKTTNVSDLQDALKATTVIYDKEGNQAGSLSGQKGTYVELDAISDSLENA VIATEDRTFYKNSGVNVKRFLLAIVSMGRFGGGSTITQQLAKNAFLTQEQTVTRKAKEFF LSLELTKKYSKQEILTMYLNNAYFGNGVWGVEDASQKYFGTSAANLTVDEAATLAGMLKG PEIYNPIDNIQNATNRRNTVLSNMVDDKKLSQADADSAAGVDMASRLDDTYQGTGDDYKY PSYFDAVIEEATKTYGLSEDEIVKNGYKIYTEMDANSQANMQQTYENTYLFPTSESDGST AQSASVALDPTTGAVRGLVGRVGGTSDTTFRNFNYATQGKRSPGSTIKPLVVYAPALASG WSINKDLPNKPIDYNGYTPTNYGGVETEDVPMYQALANSYNIPAVYLFNQIGIQKGISYG QKFGLNFDNVPEELGISLGGGVTASPLQMAQAYATFANGGEMNTAYFITKIENASGDIIA THSKKSKRVISQSVANQMTSMMLGTFSNGSAVNANYTGYTMAGKTGTVQAEFNKDLTSDQ WVIGYTPDVVMTTWIGFDKTDENHYLTGASSGTASTIFSYIAADVLPNTPGNEFTVENAY AADGQTLDYTADPNDSRNSSNKSWTDKASDVVNDVKDQASSLWDKISDSLSGLFR >gi|311100385|gb|AEKO01000009.1| GENE 58 60594 - 61463 443 289 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 8 274 7 276 287 175 39 1e-42 MTLHVEIINPYPITTVKELLETRLLIPRKIRHFLRTKKHVLINGETINWQSPVKEGDRIS LTFDTEDYPNKTIPMGDANLVEPLYEDSHLIVVNKPEGMKTHGNEPTEIALLNHVSAYCR QTCYVVHRLDMETSGAVIFAKNPFILPILNRLLEDKMIQRQYWALTEGKFQTKETVYNDK IGRDRHDRRKRVVDPRKGQVAYTTVTRLKAFKGASLVNCQLKTGRTHQIRVHLAHHGHAI LGDPLYSHRPASRLMLHAHTLSFTHPLTLEKVTVKAKSESFEQGLRNHK >gi|311100385|gb|AEKO01000009.1| GENE 59 61646 - 61978 442 110 aa, chain + ## HITS:1 COG:no KEGG:STER_0258 NR:ns ## KEGG: STER_0258 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 110 1 110 110 203 95.0 2e-51 MNPVDQWLAINVKYFPTEQVQYIRQRLETLPEQQLSMLYSISFQDPTMMLIISLFGGSLG IDRFMLGQVGLGIGKLLTCGGCGIWSIVDWFLIMDATRQSNAQKLFAVIG >gi|311100385|gb|AEKO01000009.1| GENE 60 61978 - 62283 94 101 aa, chain + ## HITS:1 COG:no KEGG:str0209 NR:ns ## KEGG: str0209 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 101 1 101 101 160 94.0 1e-38 MKNYFTRLWAYHQRFFRLYLLVLVAVYGVYLLHLPTPLSLILRPFGLKGWSAGLTRASVR LLHLDWQGAWDYNPLIYPLVVYILTYFFLFPIFSDKKIIRK >gi|311100385|gb|AEKO01000009.1| GENE 61 62385 - 63248 694 287 aa, chain + ## HITS:1 COG:no KEGG:STER_0256 NR:ns ## KEGG: STER_0256 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 155 246 11 102 102 155 84.0 1e-36 MKQQDWIDFFQAVNGRNPSIQEMAEAAQKGEFVRESSKKHKQSIEANKPEEIVETKEPLA PVEATKTDETIETTPSKEVTESVEPSVEIYDVAEEPLVDSSIDERQTFQTPNLGQEAPTA NSQEQINPIQDTTNKPLNSFADQANTSFPQTNTPLNEPWKEPEKKSRTNLIMIAIATIPV ILWALGLFLLGVVGDDFSMGLGLALWTLIVGLPVIIIDILPALLNKTDKKWLIFVLSILL NWTFIGWIILLIISINTNKEAERIKQQQMMMQMSGKQGSSDMFNPFH >gi|311100385|gb|AEKO01000009.1| GENE 62 63327 - 64946 1574 539 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 538 3 542 547 610 58 1e-174 MAKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIE LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE AAVATAVEELKAIAQPVANKEAIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEESRG METELEVVEGMQFDRGYLSQYMVTDNEKMVADLENPFILVTDKKISNIQDVLPLLEEVLK TSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGATVIT EDLGLELKDATMAALGQASKVTVDKDSTVIVEGAGSAEAIANRVNLIKSQLETTTSEFDR EKLQERLAKLSGGVAVVKVGAATETALKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV IAKVAELDLEGDDATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSQVGTGFNAANG EWVDMVGAGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPEAPAAPAMDPGMMGY >gi|311100385|gb|AEKO01000009.1| GENE 63 64991 - 65278 428 95 aa, chain - ## HITS:1 COG:SP1907 KEGG:ns NR:ns ## COG: SP1907 COG0234 # Protein_GI_number: 15901733 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Streptococcus pneumoniae TIGR4 # 3 94 2 92 94 92 58.0 1e-19 MALKPLGDRIVVRFEETEEKTASGFVLAGASHEATKTAEVLAVGEGIRTLTGELIAPSVA VGDKVLVENGAGVSVKDGEDSVSIIREADILAVLA >gi|311100385|gb|AEKO01000009.1| GENE 64 65444 - 66247 275 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 231 1 218 245 110 32 3e-23 MALLSLQQIHKTFEKGTVNENHVLRGLDLDIEQGDFISVIGGNGAGKSTLMNSIAGVLRI DEGDILLEGQSIKKASVDERSKDISRVFQDPRMGTATNLSIEENMAIAYRRGKKRSFFKK SITESERQVFKEALVDLGLGLENRMKTDANFLSGGQRQALTLAMATLVRPKILLLDEHTA ALDPKTSDMVMNLTRKIVEEQELTTLMITHNMEHAIEYGNRLVMLYHGKIVVDVRGEEKK NLTVAELMDLFHKNSGQVLNDDALVLG >gi|311100385|gb|AEKO01000009.1| GENE 65 66247 - 68187 2081 646 aa, chain - ## HITS:1 COG:SP1070 KEGG:ns NR:ns ## COG: SP1070 COG4120 # Protein_GI_number: 15900939 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 350 632 1 280 288 229 44.0 1e-59 MKKFLVSMMAVITAVLLVACSNASNKDLVHVGVLQYVEHPSLSATRKGFIEELKEEGYVD GKNIKIDYQNAQGDQSNLQTISQSLIEDNDVMLAIATPAAQSLSSLTKDKPILFTAVTDP VSAKLVKSMDNVGGNVTGTSDMSPINKQVELLKKVFPNTKKVGIMYTTSERNSEVQVEEA KKYFKEAGIETVIKGISSTNDIQDTAKSLMSQTEVIFIPTDNTIVSAINTLVDLSKETKV PVVGSDAGSVEKGVLFTYGTNYEALGRQTGRLAGRVLRGEKVKDVDAEYPKTLNVVVNHD MAKELGIDVSSISDEESKASTQDDKPIAKKDKGVIKLKVNKSSKKGFSNVVLTAISQGLL WAIMAIGVFITFRILDLADLTAEGAFPLGAATTTIMIIRGINPIFATLGGFVAGMLAGAV SGFMHTKMKIPALLTGIITLTGLYSVNLLVLGSANVSLSGHNTLVTMVMDLGLSKLNGVI LLGLIFVSLVVLMLVVLLNTQVGLALRATGDNLAMGEANGIKVDRMKILGYMISNGLIAL SGALLAQNNGYADMNMGTGTIVNGLAAIILAEVIVKYLPLGKRLWSIVVGAVLYRLVLVI ILAMNVDAQMLKLASAILLAIILYVPEVRQKLKIKPNKSLIPGGDK >gi|311100385|gb|AEKO01000009.1| GENE 66 68804 - 70651 2217 615 aa, chain - ## HITS:1 COG:SPy1962 KEGG:ns NR:ns ## COG: SPy1962 COG0442 # Protein_GI_number: 15675760 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 613 6 618 618 1056 84.0 0 MLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYMPLANRAIEKFKTIMREEFEKIG AVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDKSDFILGPTHEETFTALVRDAVKSY KQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDAYSFHQNYEDLDVTYEDYRKAYEAIF TRAGLEFKGIIGDGGAMGGKDSQEFMAVTPERTDLNRWVVLDKSIASLDEIPEDVMEEIK NELTSWLVSGEDTIAYSTESSYAANLEMATNAYTPATKVVTQEEVTRVETPDCKSIDEVA AFLNVPEEQTIKTLLFTADDEPVVALLVGNDQVNDVKLKNYLAVDFLEPATEDEARQVFG ASFGSLGPVNLPENVRIIADRKVQDVANAVVGANEDGYHLTGVNPERDFKAEYVDIREVK EGEISPDGQGVLQFARGIEIGHIFKLGTRYSESMGANVLDENGRAVPIIMGCYGIGVSRI LSAVIEQHARLFVNKTPKGQYRYAWGINFPKELAPYDVHLITVNTKDEEANALTDRLESA LAAEGYDVLIDDRNERVGSKFSDSDLIGLPIRVTVGKKASEGVVEVKIKATGDTIEVNAD NLIETLAILTTEQDA >gi|311100385|gb|AEKO01000009.1| GENE 67 70737 - 71999 1370 420 aa, chain - ## HITS:1 COG:SPy1963 KEGG:ns NR:ns ## COG: SPy1963 COG0750 # Protein_GI_number: 15675761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Streptococcus pyogenes M1 GAS # 14 420 14 419 419 563 68.0 1e-160 MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRIL PLGGYVRMAGWGEDTTEIKTGSPASLTIGSDGKVRRINLSDRQVDQTALPMNVTAYDLED KLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQYQNASIWGRLITNFAGPMNNF ILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWNSLKE SLTENTQKFSKGDNLSVTVKRRNGQEETVSVKPKENQGSYFLGVSPALKTGLKDKIFGGF QMAWEGAFKILVALKGLITNFSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGI FNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGVAVMVVLMIAVTWNDIMRAFF >gi|311100385|gb|AEKO01000009.1| GENE 68 72016 - 72810 917 264 aa, chain - ## HITS:1 COG:SPy1964 KEGG:ns NR:ns ## COG: SPy1964 COG0575 # Protein_GI_number: 15675762 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 264 1 264 264 330 67.0 2e-90 MQERLIGGGVAAAIFLPLLFIGGLPFQLLVGAMAMVAVSEMLRMKHLEIFSIEGILSMLA AFILVVPIDHYFISLPTNASVTGFAIISFLILAGTVLNSDHYSFDDAVYPITSAFYVGFG FQNLIAARLDSWEKVLFALFIVWATDIGAYLFGRQFGQNKLLPKVSPNKTIEGSVGGILS AIIVALLFGLINHNVYAPHSFFWLLICTILFSIFGQFGDLVESAIKRHFGVKDSGNLIPG HGGILDRCDSWIFVFPIMHLLGLF >gi|311100385|gb|AEKO01000009.1| GENE 69 72823 - 73572 1022 249 aa, chain - ## HITS:1 COG:SPy1965 KEGG:ns NR:ns ## COG: SPy1965 COG0020 # Protein_GI_number: 15675763 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 249 1 249 249 382 73.0 1e-106 MFKFRKKSHQEVLDNIPNHIGIIMDGNGRWAKKRLQPRVMGHKAGMDSLQKVTIEASQLG VKVLTVYAFSTENWSRPQDEVKFIMNLPVEFFNKYVPELDKNNVRILTIGDNSRLPKETL DALEKAVEQTKHNSGLILNFALNYGGRAEIVSAVQAIAKEVEAGKLSPEAIDEDLIAKHL MTDKLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSELYFTDVFWPDFDHQGLRQAISDYN KRHRRFGGV >gi|311100385|gb|AEKO01000009.1| GENE 70 73701 - 74039 509 112 aa, chain - ## HITS:1 COG:SPy1968 KEGG:ns NR:ns ## COG: SPy1968 COG1862 # Protein_GI_number: 15675764 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Streptococcus pyogenes M1 GAS # 5 110 6 110 121 62 34.0 1e-10 MNMMLVLAIYVVAIVAYVAFNRRRQAKAQEDRFAGLAKGAEVETIGGLIAIVDEIDKENN RIVLDAEGVFLTFDLSRSIMKVITPAPSTETAETVKETIVEEDSAIESADEK >gi|311100385|gb|AEKO01000009.1| GENE 71 74165 - 74881 1043 238 aa, chain - ## HITS:1 COG:SPy0316 KEGG:ns NR:ns ## COG: SPy0316 COG0217 # Protein_GI_number: 15674481 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 237 1 237 238 389 89.0 1e-108 MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLERAKQAQVP KHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAFGKNGGN MGASGSVSYMFDKKGVIVFAGEDADAIFEQLLEADVEVEDVEAEDGAITVYTEPTELHKA LEALRANGQEEFQVTELEMIPQTEVTLEGEDLETFEGLIDALEADDDVQKVYHNVADM >gi|311100385|gb|AEKO01000009.1| GENE 72 75069 - 76418 1662 449 aa, chain - ## HITS:1 COG:SP2070 KEGG:ns NR:ns ## COG: SP2070 COG0166 # Protein_GI_number: 15901889 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 449 1 449 449 813 89.0 0 MAHITFDYSKVLDKFVAPHEVDNLQAQVTVADEMVRKGTGPGADFLGWRDLPENYDREEF DRILKAAEKIKEESDVLVVIGIGGSYLGAKAAIDFLNNHFANLQTKEERKAPQIVYAGNS ISSTYLADLLEYVEDKDFSVNVISKSGTTTEPAIAFRVFKELLVKKYGQEEANNRIYATT DRQKGAVKVEADANGWETFVVPDDIGGRFSVLTAVGLLPIAASGADIKALMEGANAARKE YSSSKISENEAYQYAAIRNILYRKGYTTEILANYEPSLQYFAEWWKQLAGESEGKDQRGI YPTSANFSTDLHSLGQFIQEGTRNLFETVVRVDKPRKNVVIPELAEDLDGLGYLQGKDVD FVNKKATDGVLLAHTDGDVPNMFITIPEQDAFTLGYIIYFFELAIALSGYLNAVNPFNQP GVEAYKKNMFALLGKPGFEELGAELNARL >gi|311100385|gb|AEKO01000009.1| GENE 73 76523 - 77338 947 271 aa, chain - ## HITS:1 COG:SP0760 KEGG:ns NR:ns ## COG: SP0760 COG3568 # Protein_GI_number: 15900654 # Func_class: R General function prediction only # Function: Metal-dependent hydrolase # Organism: Streptococcus pneumoniae TIGR4 # 44 271 1 228 228 321 71.0 7e-88 MKFLTLNTHSWMEEDAEGKFQTLKEQILKAQYDIICFQEVNQEIETAAVETDAYYHALPS ATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSEILVSDV DDPTDYHTRRVAVAETAVDGREVAVASVHLSWWDKGFQEEWARIEGRFQSIGKPLILAGD FNNPAGREGYQAILASPLTLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDYVFASQE WAVNHLSVIFDGNNQPLVSDHYGLEAELTFK >gi|311100385|gb|AEKO01000009.1| GENE 74 77437 - 79623 2596 728 aa, chain - ## HITS:1 COG:SP0758_1 KEGG:ns NR:ns ## COG: SP0758_1 COG1263 # Protein_GI_number: 15900652 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pneumoniae TIGR4 # 2 449 4 451 451 711 82.0 0 MNKLKEKFGFEFWQKFGKSLMVVIAVMPAAGLMISIGKTIAMINPNVAPLVITGGFLEQI GWGVIGNLHILFALAIGGSWAKERAGGAFAAGLAFILINRLTGSIFGVTSDILADKAATV HTVFGQSIKVSDYFISVLEAPALNMGVFVGIISGFIGATAFNKYYNFRKLPEALSFFNGK RFVPFVVILRSAIAAIVLAIVWPVIQSGINGFGMWIANSKETAPILAPFLFGTLERLLLP FGLHHMLTIPINYTQLGGTYHVLTGAAKGTEVLGQDPLWLAWVTDLANLKGAHPEQYKHL LESVTPARFKVGQMIGSFGILMGMVVAIYRNVDDDKKHQYKGMMTATALATFLTGVTEPI EYMFMFVATPLYIIYAFVQGAAFAMADIVHLRVHSFGSIEFLTRTPLAINAGLAMDIINF IWVTVLFGVIMFFIANFMIKKFDYATPGRNGNYEQGDDASSESAGSASAGTSSASSQVIN IINLLGGRANIVDVDACMTRLRVTVKEADKVGTEEQWKAEGAMGLVMKGQGVQAIYGPKA DVLKSDIQDVLDSGEVIPETLPSQMTAVQKAEAQFKGVTEDVHSVADGQVINIEDVKDPV FSQKMMGDGFAVKPENGKIVSPVSGKVASIFPTKHALGLVTDNGLEVLVHIGLDTVSLEG KPFDVKVTEGQTVAAGDLLVEANLDAIREAGRETSTVVVFTNTDAIKSVKVEHTGKLAAN APVAKVEL >gi|311100385|gb|AEKO01000009.1| GENE 75 79778 - 80716 965 312 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 12 311 7 299 301 87 27.0 2e-17 MEIFLTSISGILVILGMILVGFVMGEKGWFDDESRGLIAKLVTQIALPCYMLYTITQRFT ATDLLKMLPELRFPALSMAILLGIATAVAGIFAVKKERRGLFISMFFNSNTIFVGLPINQ ALFGDASIPYVLIYYMCNTTFFWTLGTYLIQRDGEGEAEFDLKTSLKKIFSPPLMGFMLG LIIVILHIKLPTFLASDLQYLGSLTTPLSMIFIGLSVSNAGVKQLVLKKDQVLILLGRFV AAPLLMATIVYWAPLPTLMKQVFIIQSAMPVMTNAPVVAKLYGADSDYAAVMVTETTLAT MIVIPILMVLMA >gi|311100385|gb|AEKO01000009.1| GENE 76 80879 - 81691 844 270 aa, chain - ## HITS:1 COG:SPy0094 KEGG:ns NR:ns ## COG: SPy0094 COG1108 # Protein_GI_number: 15674317 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 4 262 3 262 271 248 73.0 1e-65 MISELLTYDFMQRAILAVIAISIFSPILGLFLILRRQSLMSDTLSHVSLAGVAVGIFLGQ SITWMTLVVVVIAALVLEYLRVSYKHYMEISTAILMSMGLAVALILSNKAGSSSMSLDSY LFGSIITISPEQVRALFVIAAIVLVLTLLFIRPMYLLTFDEDTAHVDGLPVRLMSLLFNI VTGIAIALMIPAAGSLLVSTIMILPAAIGMKIGQTFKSVIFWAIGIGLIGMLSGIFISYY WETPASATITLIFIAFFGLVSIFEPLLKAE >gi|311100385|gb|AEKO01000009.1| GENE 77 81684 - 82391 934 235 aa, chain - ## HITS:1 COG:SPy0093 KEGG:ns NR:ns ## COG: SPy0093 COG1121 # Protein_GI_number: 15674316 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 233 1 233 239 400 81.0 1e-111 MRYITVEGLSFQYDAEPVLDNIHYHLDSGEFVTLTGENGAAKSTLIKATLGILKPKKGTV TISETNKDGKKLRMAYLPQQIASFNAGFPSTVYEFVKSGRYPRQGWFRRLTKHDLEHVQR ALESVGMWENRHKQIGHLSGGQKQRAVIARIFASDPDIFVLDEPTTGMDAGTANTFYELM HHSAHKHGKSVLMITHDPEEVKEYTDRNIHLVRNQKLPWRCFNVHEKDGEEHKHD >gi|311100385|gb|AEKO01000009.1| GENE 78 82393 - 82848 568 151 aa, chain - ## HITS:1 COG:SPy0092 KEGG:ns NR:ns ## COG: SPy0092 COG1846 # Protein_GI_number: 15674315 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 8 150 4 146 147 147 59.0 6e-36 MEKAMLELEEQVNQLINQIVLKSENQHELLIGQCRSQVKLTNTQEHILMLLAEGRKTNSE LAKTLNVSQAAVTKAVKTLVKEGMLEAKKDKGDGRVTYFVLTQEAQPIAQEHEEHHQETL GVYRTVLEQFDSKERQIIGRFLTKLEERIEE >gi|311100385|gb|AEKO01000009.1| GENE 79 82942 - 84210 340 422 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148990506|ref|ZP_01821647.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP6-BS73] # 1 407 1 413 415 135 27 1e-30 MQLFLQHKPYRVLTLSILLGIFGTTLFDLVSVLYAATFPNPELAVGLASLITSLPYVFDF IVGYVSDRASNSFKAMKLVRWLQMSLYVFFGVLTLLRPSWWVFVLVLAINFMSDIIGNYT AYLNLSLNRQVVDEENFSLAISFRKGMPNIVTLAGKSVGVMLIALLAHNYFLFALINVLV FLASYLVLRRGQKLFDYLNEPVPESKEQQAESLKALICQFVKDTITNFTFLKSQSSIFNL VMIYSSMNLLSSAMATLLMIYLLSVKELQLGSYAVTITVFESIELVAFFLGSLFPFDFYR KLSIRSNLLFENSLALLMIVSIFIWHNPIVLFTLLFLSSYATAISNPKSDTIVIFSIVEE RQNAVFSIFSTIVTATVPLGAAMILALNQSLGATLSWTFLVLLEVFNIGYTCFWKEKTRS VS >gi|311100385|gb|AEKO01000009.1| GENE 80 84439 - 85416 460 325 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 10 297 30 316 353 181 36 1e-44 MTKLNSSFMIGNVEIPHRTVLAPMAGVTNSAFRTIAKEFGAGLVVMEMISEKGLLYNNEK TLHMLHIDENEHPMSIQLFGGDAEGLKRAADFIQTNTKADIVDINMGCPVNKVVKNEAGA KWLKDPDKIYHIVKEVTSVLDIPLTVKMRTGWSDSDLAVENALAAESAGVSALAMHGRTR EQMYTGYCDHETLARVAKAITKIPFIGNGDVRSVQDAKLMIEELGVDAVMVGRAVMNNPY IFTQINHFFETGEELPELPFDKKLDIAEDHLKRLVDLKGEKIAVREFRGLAPHYLRGTAG AAKVRGEVSRAESVAQVEEIFATLR >gi|311100385|gb|AEKO01000009.1| GENE 81 85409 - 86275 934 288 aa, chain - ## HITS:1 COG:SPy0123 KEGG:ns NR:ns ## COG: SPy0123 COG1281 # Protein_GI_number: 15674340 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 288 290 479 84.0 1e-135 MDKLIKTISESGSFRAYVLDSTETVRTAQEKHNTLSSSTVALGRTLIANQILAANQKGES KITVKVIGNSSFGHVISVADTKGHVKGYIQNPGVDIKKTATGEVLVGPFMGQGQFVSIID YGTGNPYTSSTPLISGEIGEDFAYYLTESEQTPSAVGLNVLLDEEDKVKVAGGFMLQVLP GASEEEIARYEKRIQEMPAISTLLESDDHIEALLNAIYGDELFKRLSEEELSFECDCSRE RFENALLTLGKDELQAMKDEDHGAEIVCQFCQTKYEFSEADLEELIND >gi|311100385|gb|AEKO01000009.1| GENE 82 86355 - 86714 344 119 aa, chain - ## HITS:1 COG:no KEGG:str0179 NR:ns ## KEGG: str0179 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 38 119 3 84 84 136 85.0 3e-31 MGVYNSDWLLNQIRGTANVVSKAFKFETLDIDLGQVEDEQGHTIDGNDYIDDLLIHEQYD QATTFIHSQLKRLTTNDYNLLVSVYIEYLENLPPVIRQKHHFDDRKIASLREKLSEFSW >gi|311100385|gb|AEKO01000009.1| GENE 83 86889 - 88307 1770 472 aa, chain - ## HITS:1 COG:SPy0290 KEGG:ns NR:ns ## COG: SPy0290 COG0719 # Protein_GI_number: 15674464 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 472 1 472 472 846 88.0 0 MTETNEKVEPKPIDLGEYKYGFHDDVTPVFSTGKGISEDVVRAMSAEKGEPEWMLEFRLK SLETFNKMAMQEWGPDLSALNFDDLTYFQKASDKPARDWEDVPEKIKETFERIGIPEAER AYLAGASAQYESEVVYHNMKEEYDKLGIIFTDTDSALKEHPELFKKYFSKLVPPTDNKFA ALNSAFWSGGTFIYVPKGVKVDIPLQTYFRINNEATAQFERTLIIVDEGASVHYVEGCTA PTYTTASLHAAIVEIFALDGAYMRYSTIQNWSDSVYNLVTKRATAKKNATVEWIDGNLGA EVTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHTSSSIVSKSIARNGGK VDYRGQVTFNKDSKKSVSHIECDTILMDDLSKSDTIPFNEIHNSQVALEHEAKVSKISEE QLYYLMSRGLSEQEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG >gi|311100385|gb|AEKO01000009.1| GENE 84 88383 - 88814 483 143 aa, chain - ## HITS:1 COG:SPy0289 KEGG:ns NR:ns ## COG: SPy0289 COG0822 # Protein_GI_number: 15674463 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Streptococcus pyogenes M1 GAS # 1 141 1 142 159 207 75.0 6e-54 MALSRLDSLYMAVVADHSKSPHHHGVIPDVEQLQLNNPTCGDVINLSVKFDGDVIEDIAF AGDGCTISTASSSMMTDAVIGKTKAEALELAEIFSLMIQGDHKDEDKLGEAKLLAGVSKF PQRIKCATLSWNALKKAIERSEL >gi|311100385|gb|AEKO01000009.1| GENE 85 88801 - 90033 1299 410 aa, chain - ## HITS:1 COG:SPy0288 KEGG:ns NR:ns ## COG: SPy0288 COG0520 # Protein_GI_number: 15674462 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Streptococcus pyogenes M1 GAS # 4 410 2 408 408 676 77.0 0 MSALDAYKIRQDFAILDQVVNDEPLVYLDNAATTQKPQVVLDALMTYYHEDNANVHRGVH TLAERATAAYEASREKFRQFINAKSTKEVLFTRGTTTGLNWVGRFAEQVLEPGDEVVISI MEHHSNIIPWQKACKKTGAKLVYAYLKDGQLDMEDLANKITEKTKFVSLAQVSNVLGCIN PVKEIAKFAHQVGAYMVVDGAQSAPHMAIDVQNLDCDFFTLSGHKMLGPTGIGVLYGKEE ILNQMNPIEFGGEMIDFVYEQEATWKELPWKFEAGTPNIAGAIALGAAVDYLSALGMGNV HAYEQELVDYVLPKLQAIEGLTVYGPEDPSQHAGVIAFNIDGLHPHDVATALDYEGVAVR AGHHCAQPLINHLGISSAARASFYIYNTKEDCDKFVEAILATKEFFNGTL >gi|311100385|gb|AEKO01000009.1| GENE 86 90087 - 91349 1775 420 aa, chain - ## HITS:1 COG:SPy0287 KEGG:ns NR:ns ## COG: SPy0287 COG0719 # Protein_GI_number: 15674461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Streptococcus pyogenes M1 GAS # 1 420 1 420 420 649 76.0 0 MSKESIIAFSQAKAEPLWLQDLRQAAFDKLDSLALPKIERVKFHRWNLGDGTIAENEPSA NVPDFTALGNNPKLVQVGTNTVLEQLPADLISQGVVFTDLTTALEEIPEVVEAFFGKAVA YDEDKLAAYNYAYFNSAAVLYVPDNVEIDLPVESYFYQDGTSNVPFNKHVLIVAGKNSKL TYLERFETLGEATEKASANISVEVIAQDGAQVKFAAIDRLGENVTTYISRRGRIGRDASI DWALGIMNEGNVIADFDSDLIGNGSHANLKVIGLSSGRQVQGIDTRVTNYGNNSVGHILQ HGVILERGTLTFNGIGHIVKGAKGADAQQESRVLMLSDKARSDANPILLIDENEVTAGHA ASIGQVDPEDMYYLMSRGLDQDTAERLVIRGFLGAVITEIPVKEVRDEMISVTDTKLNKR >gi|311100385|gb|AEKO01000009.1| GENE 87 91386 - 92156 170 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 231 1 224 245 70 26 5e-11 MSVLEIKNLHVSVEDKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEITEG DILFDGESILDLEVDERARLGLFLAMQYPAEIPGITNAEFIRAAMNAGKEDDEKISVLDF ITKLDEKMELLGMREEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDA LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGKVVLSGGPELAARLEQEG YAKIAEELGYEYHEEA >gi|311100385|gb|AEKO01000009.1| GENE 88 92282 - 93475 1095 397 aa, chain - ## HITS:1 COG:SPy0282 KEGG:ns NR:ns ## COG: SPy0282 COG0472 # Protein_GI_number: 15674459 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Streptococcus pyogenes M1 GAS # 3 387 4 389 389 473 70.0 1e-133 MPWTINYIFVLIGTFLIAIVGTPLVRSLAFRVGAVDHPNARRINKKPMPSAGGLAIFLAF VLATLVFMPMIIQKDVWHISYLRYILPVVGGGAIVALTGFIDDIFELKPLPKMLGIVMGA VIVWAFTDFQFDSFKIPFGGPMIQFGPVLTFILTVLWIAAITNAINLIDGLDGLVGGVSI ISLMTMGVISYFFLYDTDIFLTMTIFVLVAAIMGFFPYNYHPAIIYLGDTGALFIGFMIG VLSLQGLKNATAVAILSPVIILGVPIVDTVVAIVRRKLSGRSAMEADKMHLHHRLLAMGF THRGAVLVVYAIAILFSLIALLLNVSSRLGGILLLLSLILGMEILIEGLEIWGVGRTPLF NFLKFIGNSDYRQAIMLKWKQGRKNKHLKSQAMAFLL >gi|311100385|gb|AEKO01000009.1| GENE 89 93479 - 94228 892 249 aa, chain - ## HITS:1 COG:SPy0281 KEGG:ns NR:ns ## COG: SPy0281 COG4862 # Protein_GI_number: 15674458 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms; N Cell motility # Function: Negative regulator of genetic competence, sporulation and motility # Organism: Streptococcus pyogenes M1 GAS # 1 244 1 248 253 245 57.0 5e-65 MEMKQISETTLKIMITMEDLEEHGMELKDFLIPQEKTEEFFYTVMDELDLPDNFKNSGML SFRVTPRKDRVDVFVTKSDLKEDLDFNDLSDMDDYSGLSPEEFLKALEGNFMDKGDIEAH HKLEEIEKALEEVDKTMTEPAKEVAEETIREDYTHYVLAFSDFDQVVTFTQGLKDVPVEG SELYKLGDIYYMTILLYLADEPDYYANNMYARFLEYANVADRTRPYLQEHATILMEEDAL SVLQATKWS >gi|311100385|gb|AEKO01000009.1| GENE 90 94497 - 94775 193 92 aa, chain + ## HITS:1 COG:no KEGG:str0161 NR:ns ## KEGG: str0161 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 2 70 3 71 71 119 98.0 3e-26 MLFLYLSGQPHQVNKSTFLTGLIFAIILATAPIYDDNHLTLRQQSLLHFSIMYVTILPIL CLSGWHPLHNMVDLLRILSGFLTCGLVLWTLA >gi|311100385|gb|AEKO01000009.1| GENE 91 94853 - 95707 1103 284 aa, chain - ## HITS:1 COG:SPy0280 KEGG:ns NR:ns ## COG: SPy0280 COG1968 # Protein_GI_number: 15674457 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Streptococcus pyogenes M1 GAS # 6 283 2 279 279 376 74.0 1e-104 MQTAQFIIELLKAVFLGIVEGITEWLPISSTGHLILVNEFLNLRQSKDFIDMFNIVIQLG AILAVMVIYFKRLNPFQPGKTAREVQLTWQLWLKVVIACIPSAFFGLLLDDWMEAHLSNF FVVAIMLVVYGIAFIWIEDRNRRVEPKVTDLARMSYKTAFYIGLFQVLSIIPGTSRSGAT ILGGIIVGTSRSVAADFTFFLGIPTMFGYSGLKAVKYFIDGNTLTGGQAAILLVASVTAF LVSLFVIRFLMNYIKKHDFTVFGKYRIVLGIIVLFYGAVKLIFG >gi|311100385|gb|AEKO01000009.1| GENE 92 95910 - 97457 1701 515 aa, chain + ## HITS:1 COG:SP0453_1 KEGG:ns NR:ns ## COG: SP0453_1 COG0834 # Protein_GI_number: 15900370 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 326 1 325 325 396 64.0 1e-110 MKKIIVACFAALLLVFGGVSSTQADEYLRVGMEAAYAPFNWTQDDDSNGAVPIEGTKQYA NGYDVQIAKKIAEAQGKKPLVVKTAWTGLIPALTSSKIDMIIAGMSPTAERRQEIDFSDS YYRSEPVMVVSSDGDYAKAKSLKDFKDAKITAQQGVYLYNLIDQIPDVSKQTAMGDFGAM RQALASGIIDGYVSERPEAKTAEEASSKYKMITLKDGGFQVSDDDVSLAVGLRKGDSQQM EQVNKVLAGISQEERVKLMDHIINIQPADKTDETKKGNFFSQMSTIIAKNWPQFLRGTGI TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS MVIYYGTAQAFGINIDRTLAAVFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHG QTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFF VIAAIYFVLTFTVTRILRYVERRLDQDTYTQGGVH >gi|311100385|gb|AEKO01000009.1| GENE 93 97457 - 98197 289 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 235 1 230 311 115 32 8e-25 MTETILEIKNLKKSYGKNEVLKDISLSVKKGEVISIIGSSGSGKSTFLRSINLLESPSGG EILYHGDNVLEKGYDLTTYRERLGMVFQSFNLFENLNVLENAIVAQTTVLKRDRKEAESI AKANLEKVGMGEQYWKAKPKQLSGGQKQRVAIARALSVDPEAILFDEPTSALDPEMVGEV LKTMQELSETGLTMIIVTHEMEFARDVSDRVIFMDKGVIAEQGSPEQIFENPKEERTKEF LKRFLG >gi|311100385|gb|AEKO01000009.1| GENE 94 98287 - 100614 3135 775 aa, chain - ## HITS:1 COG:no KEGG:SGO_0430 NR:ns ## KEGG: SGO_0430 # Name: not_defined # Def: LPXTG cell wall surface protein # Organism: S.gordonii # Pathway: not_defined # 1 689 1 721 886 140 26.0 3e-31 MNKKVLATAGIAALAVSTSVAKADEVTTNGQVSTTASVSSTATQAIPTQSQVETAREQAN AASQAVSHQESVVANHEETINQAKANLATADANLQKAQTATDEASLEAIAVAQGQVTSAE HAANEAKSAVATAQSAEKTVKYVADKQQAVVNADQANVNAKATEVADSQKSVDVAKAALN GSSASELASNQSKAQSDFDVATAAEKKAQEELAVAQAAYKEKATAISSKEGQLIADQNAA NQAKAAYETAQTVANEKAVALAAAEAAKKKAESSTTNIRQKFTVSSEYISALKIYESKTS TAEEKYQAEQTLKDINKRDRENNKYQDNEADKNITISDLNKLSEAQITDLSLYTSSLINQ IRSAFGTTETSVSKGSVIATDRVTDGYVADNWGWESISNRRHDSAALACAGKSFNTVNIG ENLNTWQGLTGPFTLNQIKEYIYEAMLDFMFNGQEWNHARSIAGLTSDGGETYIGTDLSV VAGAFNVHVNNINENSISFDSSFDTTKIANPYVGSQSQPSLNANLAAAKVAYETAKQAND QAQSDLASKKVASESATLKLKNTQSELTALKATASKLAAAQTNLSEKQAALKQAKQALAF AKNRVAALTNASANLAKAKAERAIAFAKLTAAKGALSTERAKLVELSSKRDKLTSEYTTV QTAFDNYMKAKADKERQTQLSKEFAKITSKGLTPVSIYDVDGKVVALTTQEQAAQTVAQV PVNYGQTKAEKQAPVQEADSLPETGESTAAGFSLVGLFMTLLTFLGFVDRRTGRN >gi|311100385|gb|AEKO01000009.1| GENE 95 101106 - 101321 164 71 aa, chain + ## HITS:1 COG:no KEGG:str0155 NR:ns ## KEGG: str0155 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 71 123 193 193 112 98.0 5e-24 MFIPLGLLFSSRMSNLLLCLIALFSVESIQYFGHLGVFDLGDIVLNMLGLLVGTAIHQLP QFQTLIKKILT >gi|311100385|gb|AEKO01000009.1| GENE 96 101291 - 101503 81 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMEQFLFLTRALARVQNSSLDSESYYFVFYSEYIRRLRLIFCIHLKECSNKTSRFKFCRF FYVKIFLINV >gi|311100385|gb|AEKO01000009.1| GENE 97 101561 - 101818 428 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228476469|ref|ZP_04061159.1| ribosomal protein S15 [Streptococcus salivarius SK126] # 1 85 5 89 89 169 95 6e-41 KREKNELIAQYARHEGDTGSVEVQVAVLTWEINHLNDHIKQHKKDHATYRGLMKKIGHRR NLLAYLRRTDVNRYRELISSLGLRR >gi|311100385|gb|AEKO01000009.1| GENE 98 101977 - 103134 767 385 aa, chain - ## HITS:1 COG:SP1600 KEGG:ns NR:ns ## COG: SP1600 COG0477 # Protein_GI_number: 15901440 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pneumoniae TIGR4 # 1 380 1 382 383 245 44.0 1e-64 MTRILEKISLLGLSLLLISAFSISTALPPMLDYYSPTYNASQIELLVSVPSFSVVAMLLL NSFIDKWLSDRQLIVTGLLLLSSSGIFPFFVQAYPLVLLSRIAFGMGIGLINAKAIAIIS QRYQGKERVQMLGIRGSMELIGGASCSLLVGQLLKIHWTFAFLIYGFGFIILAMYLLFVP PMEQIEKKEVQKSKQGLNKKDFAMISGMALLAGFVICINSSISLRVPLFQIDGKTIVSGQ SALVLSLEQGIGIVAGLSFASLLSHIKNRLLPMALFCLSICLFGIALANNLLILILSSVG VGFFYSIVLTIIFYRLSECIARNLLNKATAYVLLGCNLGSAVSPYILKLLALVSSSFSWI FLAYAIVSFLLFLGFLLNSRVVKKA >gi|311100385|gb|AEKO01000009.1| GENE 99 103242 - 103880 632 212 aa, chain + ## HITS:1 COG:ECs3055 KEGG:ns NR:ns ## COG: ECs3055 COG0664 # Protein_GI_number: 15832309 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Escherichia coli O157:H7 # 11 210 3 206 219 93 29.0 4e-19 MRNHTIHPQLEQVFSASYLSQLQKVTFQKGDYICTQGQAITELTYILSGRVKIVRSLSNG KEHILEMPQQPQLLGDVELMTNQLAGSSVIALEEVQAVQLPLNNKEALLKDPVFLYQIGR NLAMALHKQGITASTNASYSVKERLATHILNSEEENIFQLSPSILASRFGTSYRHVQRVI KQFIDQGIIEKKAFKTYRILERQNLEKLAFID >gi|311100385|gb|AEKO01000009.1| GENE 100 103974 - 104588 877 204 aa, chain + ## HITS:1 COG:SP1456 KEGG:ns NR:ns ## COG: SP1456 COG0242 # Protein_GI_number: 15901306 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pneumoniae TIGR4 # 1 204 1 203 203 327 79.0 6e-90 MDAQTKIIRASHMIDMNDIIREGNPTLRAVAEDVTFPLSDEDIILGEKMMQFLRNSQDPV IAEKMGLRGGVGLAAPQLDISKRIIAVLVPNPEDAEGNPPKEAYSLQEIMYNPKVVAHSV QDAALGDGEGCLSVDRDVPGYVVRHARVTVEYYNKEGEKQRVKLRGYNSIVVQHEIDHTN GIMFYDRINKDNPFAIKDGLLIIE >gi|311100385|gb|AEKO01000009.1| GENE 101 104788 - 105366 494 192 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKQFGKWLLVGVVTIIALKYTYGLLYNVFQPFSDFLITHLSFPDWLANFLGGTFHTSVYV LAVWWFSGFLGLVPRLGQFIERYGWVIFILSWLGISATVIIALLVLAAIAICYLFSETMN EPSESNTISGGMDTSVQNNTRCQDDRNKALDERDRIERGLLNQKRCAERAGNQADVRYCQ DAINANRRNSPR >gi|311100385|gb|AEKO01000009.1| GENE 102 105396 - 106571 897 391 aa, chain - ## HITS:1 COG:no KEGG:SGO_0181 NR:ns ## KEGG: SGO_0181 # Name: not_defined # Def: putative lipoprotein # Organism: S.gordonii # Pathway: not_defined # 78 380 36 330 332 119 31.0 2e-25 MKKKLLSFVLLSSLLPLVACQKLPTSQSKTKNSTSTTSQVKESQNETPSTSSSASKKADN EKLYASVLDMYRPIIVNKSVSSVPSSLATDEAYATNIIFDAVNAGETIQYSFADINKDGK DELLIGSPERVHAIYYLNNTDQPVFAISAGTYAKGGYLSDMKIYSDGTIYCQQFQRMRPE AKAETYEIKNGAFNQIQSVDFSMANTKDGTSLVGLSDASLFELGQESWKDFSDSNDSQTT TNEAKNDSSSKESSSSKSDAKQSGMDINAIQKGDFSSIAGTWKNGRGDTLTFDNNGLVSD KEKVATEYAKFTDGYLTASTGPKSGVGPGGAAMAFLPIGVSLTSAVTSSNDNVDDQSDKN KDRIWTGQSLIGTTDDSYFYYDDSYFYYKVN >gi|311100385|gb|AEKO01000009.1| GENE 103 106677 - 109286 2810 869 aa, chain - ## HITS:1 COG:no KEGG:SGO_0430 NR:ns ## KEGG: SGO_0430 # Name: not_defined # Def: LPXTG cell wall surface protein # Organism: S.gordonii # Pathway: not_defined # 4 748 3 764 886 105 24.0 1e-20 MNSKKIISSVSLTTAILATGIISQEAHADSVDTTTTTVSQAQSQPVTAEQVASAKASYDT NQEAQAQAQSVVDSKKQALETAKANTTAAQDAVAQAETVTAQATEANIQSAKEAIPTAEA KVQPAKETVETAKTDVTTKEANQSQAQAAVNEAQGNVNQAQKAVAEATQIQSEKQTAVDT SAKEVETAKQGVVDAQATVAEKTDKVSQAGQTVETAKQNDVNLDADTKEAEINVEKADQA AQVAKSEVATAKAKADETAQALKDAEFNHPTHVVMTDEFKNNLKQYVFGSLSGEALNDLV TKTIASEDESRKLNADYLSTFTPDTTGQKYDVTNIPLELQTELSQYFAYLVNDVRQQLGT SKLVVNTDAIKFATLVAEKYDKNHDPFSGHDNKAINEAAKEMGYWYNRKNQGNAYENLTG NSPDSAYNLDSDGNSTYKIGDKVELTKSELYKLIAENVSRFIYEGGSNGHYGHADSLITQ PSLGISFTLSHTDFGFGTVPMIETHVLYTPVHDLVNFDKKLLDESKNVPDLVIPDKQAAE VADRAAQAALVTATAQAQAAQTRFEQAKAAYDALVATPRQTAEVEAKLATAKAELTNAQT ALEAAENTLSTVTASHADKVTALDMAKATRDEAVNVLTAAQSKLAEANQELAQREVATTV AKAKLTELEQALKDAEQAVIDAKATYEQLVTAKANLATARQAYTQAVTAQEAAQAAYDKA MVVLTNAKAQTALSGTKYTNLKAAYDARIAYEEAQRKSKEEVLRRQAESDAKAKQVRQDV NGTQSNRVNSNTHVGLPEFISSTNEVKTTSFSAAQVATAEATQAVVNRRGTTDYQAPLPQ TGESDTAVYLLAGLGMLGLSGVTARKRRG >gi|311100385|gb|AEKO01000009.1| GENE 104 109670 - 110920 1506 416 aa, chain - ## HITS:1 COG:SP0450 KEGG:ns NR:ns ## COG: SP0450 COG1171 # Protein_GI_number: 15900367 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Streptococcus pneumoniae TIGR4 # 1 416 1 416 416 671 78.0 0 MITANDIVKANEVLKNVVERTPLDFDRYLSEKYGATIYIKKENMQKVRSFKLRGAYYAIH QLSDEDKARGVVCASAGNHAQGVAYTCNEMKIPATIFMPVTTPHQKIGQVRFFGGKFVTI KLVGDTFDASAQAAQEYTKSEGMTFIDPFDDYNVQAGQGTVAYEIYEQAQEEGVSFDSIL VPVGGGGLISGVATYIKDVAPSIEVVGVEASGARSMRAAFDRGYPVKLEEIDKFADGIAV QKVGVKTYEVARKYVDRLLGVDEGLISETLIDMYSKVGTIAEPAGAASVAALEVIKDEIK GKTIVCIISGGNNDINRMPEMEERALIYDGIKHYFVVNFPQRPGALREFVNDILGPNDDI TRFEYIKRANKGKGPVLIGIALSDKNDYDGLLERLSAFDPSYINLHGNETLYNMLV >gi|311100385|gb|AEKO01000009.1| GENE 105 111242 - 111442 283 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|3023639|sp|Q59979|DEXT_STRSL ## NR: gi|3023639|sp|Q59979|DEXT_STRSL RecName: Full=Dextranase; AltName: Full=Alpha-1,6-glucan-6-glucanohydrolase; Flags: Precursor # 1 65 1 65 822 101 89.0 1e-20 MTVNLTLQHASEIIGQDNVDITLAAGASAKVSNLIVASGWLTNNTGYLVTISVNDKSGAV LSVEKD >gi|311100385|gb|AEKO01000009.1| GENE 106 111816 - 112259 544 147 aa, chain - ## HITS:1 COG:SPy1980 KEGG:ns NR:ns ## COG: SPy1980 COG1490 # Protein_GI_number: 15675771 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Streptococcus pyogenes M1 GAS # 1 145 1 145 147 218 77.0 3e-57 MKIVIQRVQSASVVIEDSTVGAIKQGLLLLVGVGPEDTKEDLEYAVRKIVNMRIFSDEDG KMNLSVKDIGGQILSVSQFTLFADTKKGNRPAFTGAAKPDVASQFYDDFNQSLSAHVPVE RGRFGADMQVSLINDGPVTVILDTKNR >gi|311100385|gb|AEKO01000009.1| GENE 107 112272 - 114491 2390 739 aa, chain - ## HITS:1 COG:SPy1981 KEGG:ns NR:ns ## COG: SPy1981 COG0317 # Protein_GI_number: 15675772 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Streptococcus pyogenes M1 GAS # 1 739 5 743 743 1219 84.0 0 MAKDKNVTGEEILDICSAYMSADDLKLVEEAWHYATDAHSGQFRQSGEPYIIHPIQVAGI LADLHLDAVTVACGFLHDVVEDTEKTLDDLEADFGTDVRNIVDGVTKLGKVEYKSHEEQL AENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGI SRIKWELEDMSFRYLNEVEFYKISHMMKEKRREREALVDEIVDKIKTYTAEQGLVGDVYG RPKHIYSIFRKMRDKKKRFDQIYDLIAIRCVMETHSDVYAMLGYIHELWRPMPGRFKDYI ANPKSNGYQSIHTTVYGPKGPIEIQIRTKEMHQVAEYGVAAHWAYKKGIKSKVDSKESAL GMNWIKDLVELQDASNGDAKGFVDSVKEDIFSERIYVFTPNGAVQELPKDSGPIDFAYAI HTQVGEKATGAKVNGRMVPLTAKLKTGDVVEIVTNANSFGPSRDWIKMVKTTKARNKIRQ FFKNQDKEASITKGRELLIAYFQEHGYIANKYLDKKHIEKILPRMSVRSEEALYAAVGFG EISAAAVFNRLTEKERREEERAKAKAEAEELMNGGEVKTEKKEILKVKSENGVIIQGASG LLMRIAKCCNPVPGDEIEGYITKGRGIAIHRSDCNNIKSQEGYEQRLIEVEWDERNANKS YLAEIDIYGLNRSGLLNDVLQILSNTTKSIATVNAQPTKDMKFANIHVSFEIANLIELTG LVDKIKIIPDVYSVKRTNG >gi|311100385|gb|AEKO01000009.1| GENE 108 114659 - 115114 484 151 aa, chain + ## HITS:1 COG:SPy1984 KEGG:ns NR:ns ## COG: SPy1984 COG1780 # Protein_GI_number: 15675774 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Streptococcus pyogenes M1 GAS # 1 145 1 145 160 226 73.0 2e-59 MSQLTLVYISLSGNTQSFVKRMSDYLSLNHGIECRQINIKELNHETFQVDDPFVALLPTY LEGGNGVDNGDVEILTNPLGDFIAAHGNHKRCFGIIGSGNRNFNNQYCLTAKQYSQRFGF PMLGDFELRGTQSDIERLAPIILEAQKNFNL >gi|311100385|gb|AEKO01000009.1| GENE 109 115104 - 116054 778 316 aa, chain - ## HITS:1 COG:VC2562 KEGG:ns NR:ns ## COG: VC2562 COG0737 # Protein_GI_number: 15642557 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Vibrio cholerae # 1 143 61 202 681 145 50.0 1e-34 MSTTDLHTNLVNYDYYQDKPSQTVGLSKTDVLIKKARETNPNTVLVDSGDTIQGIIFGAY KALIDPVAQGETHPMYKAFEMLGYDAETLGNHEFNYGLEFLDHMVKAAKINIINVNVRNA QTGDYYYNPYKIVNKTFTDTDGKWKVVNSKAKLEKNDTKSDIADKDLIDMAAYDHNGPST QAGFAEYRLSVKEKANQVDDTTNKESEKSPKGVETTDQSKREISKATVVASVAKPAPASQ LSNAQVVILPQAQVQETQGLSSVKALPNTGSDESVSVTLAGLILMTLARCFGIKKHEKIK QEKKPLSGLFCSCFTN >gi|311100385|gb|AEKO01000009.1| GENE 110 116392 - 117108 936 238 aa, chain - ## HITS:1 COG:SPy1987 KEGG:ns NR:ns ## COG: SPy1987 COG1385 # Protein_GI_number: 15675777 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 2 236 11 245 249 341 74.0 9e-94 MENPVIIKDKDTVKHMFNVMRLAEDDQVVLVFEDGIKYLARVTDRENHVLEVIEVLNENV EMPVSVTIASGFPKGDKLELVTQKATELGAQAIWGFPADWSVVKWDGKKLAKKEDKLDKI ALGAAEQSKRNRVPEVRLFEKKGEFLSELDNFDKIFIAYEETAKAGELATLARELAHVES GQKILFIFGPEGGISPSEIDAFEEAGGVKVGLGPRIMRTETAPLYALSSVSYALELNN >gi|311100385|gb|AEKO01000009.1| GENE 111 117136 - 118089 1600 317 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228477939|ref|ZP_04062552.1| ribosomal protein L11 methyltransferase [Streptococcus salivarius SK126] # 1 317 1 317 317 620 98 1e-177 MDKWQELTIEVNREVEEAASNILIESGSQGVAIDDSADYLENADRFGELYPEVEQVETVK ITAYYPESVDIEAITKQVNERLAELTDFGLETGDIHLATQELVEEDWAENWKKYYEPARI THDLTIVPSWTDYEASVGEKIIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVIDVGT GSGVLSIASSLLGAKEIYAYDLDDVAVRVAQENIDMNPSMENIHVATGDLLKGVTQESDV IVANILADILIHLTEDAYRLVKDEGYLIMSGIISEKWDMVRTSAEKAGFFLETHMVQGEW NACVFKKTDDISGVIGG >gi|311100385|gb|AEKO01000009.1| GENE 112 118090 - 118536 339 148 aa, chain - ## HITS:1 COG:SP1783 KEGG:ns NR:ns ## COG: SP1783 COG0494 # Protein_GI_number: 15901612 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pneumoniae TIGR4 # 10 141 7 138 142 168 59.0 3e-42 MDAYLKDQFDFTGVKAALLVEQSILVILRDNKPDIPWPNMWELPGGGREGQETPLECLQR EVWEELGLTLTEESIIWSKIYPSMLDKDRSAVFVVGRISQEQYREIRFGDEGQAFKLMPV EDFIKVEGVIPQLQERFKDYLVGKETEN >gi|311100385|gb|AEKO01000009.1| GENE 113 118552 - 119022 505 156 aa, chain - ## HITS:1 COG:no KEGG:str0135 NR:ns ## KEGG: str0135 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 156 1 156 156 258 97.0 6e-68 MAKFGFLSVLEEELDKHLDYDFAMDWDKKNHAVEVTFILEAQNSSNVETIDDKGEVSDED VIFEDYVLFYNPAKSRFDEEDYLVTIPYEPKKGLSREFLAYFAETLNEVATEGLSDLMDF LSDDGPEEFGLAWDKDAFEKGKAQLEEKEFFAYPRY >gi|311100385|gb|AEKO01000009.1| GENE 114 119117 - 120721 1901 534 aa, chain - ## HITS:1 COG:SP0494 KEGG:ns NR:ns ## COG: SP0494 COG0504 # Protein_GI_number: 15900408 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Streptococcus pneumoniae TIGR4 # 2 533 3 534 535 995 90.0 0 MTKYIFVTGGVVSSIGKGIVAASLGRLLKNRGLKVTIQKFDPYINIDPGTMSPYQHGEVY VTDDGAETDLDLGHYERFIDINLNKYSNVTTGKIYSEVLRKERKGEYLGATVQVIPHITD ALKDKIKRAATTTDSDVIITEVGGTVGDIESLPFLEALRQTKADVGSDNVMYIHTTLLPY LKAAGEMKTKPTQHSVKELRGLGIQPNMLVIRTEQPAGQGIKNKLAQFCDVAPEAVIESL DVEHIYQVPLNMQAQGMDQIVCDHLKLDAPAADMTEWSAMVDKVLNLKKTTKIALVGKYV ELHDAYLSVVEALKHSGLANDTAIDIDWVNANDLTAENVASRLADADGIIVPGGFGQRGT EGKIQAIRYARENDVPMLGVCLGMQLTCIEFARHVLHLDGANSAELDPNTKYPIIDIMRD QIDIEDMGGTLRLGLYPCKLKPGSKAAAAYGNQEVVQRRHRHRYEFNTKFREQFEAEGFV FSGVSPDNRLMEVVELPDKKFFVAAQYHPEYHSRPNHAEELYTAFVTAAVENAK >gi|311100385|gb|AEKO01000009.1| GENE 115 120973 - 121503 640 176 aa, chain - ## HITS:1 COG:SPy1895 KEGG:ns NR:ns ## COG: SPy1895 COG3343 # Protein_GI_number: 15675708 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, delta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 156 16 171 191 172 80.0 4e-43 MIEVARAILETRGRDNEMYFNDLVNEIQNYLEKSDADIRSALPFFYSDLNTDGSFIPLGD NKWGLRSWYAIDEIDEEVITLEDTDENAPKRKNKKVNAFMDGDEDAIDYNDDDPEDENFT PDSDSLEYDDDSEDDEKAEVESYDSELNEIIPDDDLDDVELSEEEDDDDYEDESND >gi|311100385|gb|AEKO01000009.1| GENE 116 121706 - 122989 1542 427 aa, chain - ## HITS:1 COG:SPy1896 KEGG:ns NR:ns ## COG: SPy1896 COG0544 # Protein_GI_number: 15675709 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Streptococcus pyogenes M1 GAS # 1 427 1 427 427 583 78.0 1e-166 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKVKKNLNVPGFRKGHMPRAVFNQKFGE EALYDDALNAILPSAYEAAIAELDLDVVAQPKIDVKSIEKGQDWTLTAEVVTKPEVKLGA YKDLEVSVEASKEVTDEEVDAKLENERRNLAELVVKEGAAENGDTVVIDFVGSVDGVEFD GGKGENHSLELGSGQFIPGFEDQLVGAKAGDEVEVKVTFPEDYQASDLAGKAAVFVTKVN EVKAKEVPALDDELAKDLDDEVETLDELKAKYRKELEAAKEIAYDDAVEGAALDLAVENA EIVELPAEMVEDEVHRAMNEFMGNMQRQGISPEMYFQITGTTQEDLHKQYEADADKRVKT NLVIEAVAAAEGFDATEEEIQKEINDLAAEYNMEVSQVSALLSPEMLKHDITMKKAVEVI TSTAKVK >gi|311100385|gb|AEKO01000009.1| GENE 117 123132 - 123512 297 126 aa, chain + ## HITS:1 COG:SPy1897 KEGG:ns NR:ns ## COG: SPy1897 COG0668 # Protein_GI_number: 15675710 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Streptococcus pyogenes M1 GAS # 1 123 1 123 281 134 52.0 4e-32 MNILQKYIQQFNFEESLMLLISKGIKLLILLIIFLLSKKIINFLFKHTVGRSLSWTIQTS ARKKTIERLLHNCMNYILYFFLVYWLLSILGVPVSSLLAGAGLAGVALGLGAQGFLSDVV NGFSSY >gi|311100385|gb|AEKO01000009.1| GENE 118 123674 - 123973 192 99 aa, chain + ## HITS:1 COG:SPy1897 KEGG:ns NR:ns ## COG: SPy1897 COG0668 # Protein_GI_number: 15675710 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Streptococcus pyogenes M1 GAS # 1 99 182 280 281 99 45.0 2e-21 MRAQIDIPVYTSTDINKVTSIIQQVNKDNIENYPEIIGTPNIIGLTSKPSGQLVFRVDIF TKNGQQVHIYADFLKLYQEAIFKEKVELPRITGNTIEVK >gi|311100385|gb|AEKO01000009.1| GENE 119 124076 - 124573 343 165 aa, chain - ## HITS:1 COG:no KEGG:str0130 NR:ns ## KEGG: str0130 # Name: comX # Def: transcriptional regulator, competence factor,RNA polymerase sigma factor # Organism: S.thermophilus_CNRZ # Pathway: Two-component system [PATH:stc02020] # 1 165 1 165 165 274 96.0 7e-73 MEQEVFVHAYETVRPIVLKAFRQYFIQLWDQADMEQEAMMTLYQLLKKFPDLEKDDDKLR RYFKTKFRNRLNDEVRRQESVKRQANRQCYVEISDIAFCIPNKELDTVDRLAYDEQLNAF REQLSSEDSLKLDRLLAGECFRGRKKMIRELRVWMVDFDPCNEED >gi|311100385|gb|AEKO01000009.1| GENE 120 124901 - 125098 203 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|171778703|ref|ZP_02919799.1| ## NR: gi|171778703|ref|ZP_02919799.1| hypothetical protein STRINF_00651 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 37 103 139 225 63 91.0 3e-09 MYNANIELKDYAPKRGLYMAKARRKTTIDERKEIVNYYAIKDYTVKSVHKVDMTVKRLWK LEALS >gi|311100385|gb|AEKO01000009.1| GENE 121 125123 - 125404 244 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|171778703|ref|ZP_02919799.1| ## NR: gi|171778703|ref|ZP_02919799.1| hypothetical protein STRINF_00651 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] # 1 93 1 93 225 172 97.0 4e-42 MSRRERFTPYEKEQACLDYINGNRSRSEICNCLHISTRTIQDWAAIYKKYGILGFTKKTK KRSYSKEFKMELVEKCISGEASSIDLGHQYDIS >gi|311100385|gb|AEKO01000009.1| GENE 122 126682 - 127416 171 244 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 233 1 237 422 283 62.0 2e-76 MRLIKNTTELIGIKDPNIIISLVFETDTHIEVQAKLDYPAPPCPHCHGKMIKYDFQKTSK IPLLEQAGTPTLLCLKKRRFQCKSCKRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLHVSTSTVYRKLDQFTFKKHYDKLPAIMSWDEFGFKKGALAFIAQNYETNELIT ILDNRRQTTIRNHFLKYPLKVRRKVQFITMDMSGAYIPLAHRLFPNAKIVLDRSTLSSTL DVPF >gi|311100385|gb|AEKO01000009.1| GENE 123 127434 - 127937 299 167 aa, chain + ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 166 256 421 422 185 62.0 4e-47 MNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVEKTLNFSEELAN YYNLYQLLLFHFQEKRVDEFFELIEENMSKVNHYFQTVFRTFIRHKQYIQNALETDYSNA KLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC Prediction of potential genes in microbial genomes Time: Sun May 29 18:55:17 2011 Seq name: gi|311100322|gb|AEKO01000010.1| Streptococcus vestibularis F0396 ctg1126932565725, whole genome shotgun sequence Length of sequence - 67988 bp Number of predicted genes - 66, with homology - 63 Number of transcription units - 35, operones - 16 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - LSU_RRNA 61 - 2962 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. - TRNA 3109 - 3181 84.6 # Ala TGC 0 0 - SSU_RRNA 3243 - 4777 99.0 # AY188352 [D:1..1546] # 16S ribosomal RNA # Streptococcus salivarius # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. 1 1 Op 1 . - CDS 5141 - 5437 87 ## COG2826 Transposase and inactivated derivatives, IS30 family 2 1 Op 2 . - CDS 5443 - 6150 143 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase - Prom 6178 - 6237 5.5 3 2 Op 1 11/0.000 - CDS 6291 - 8270 1301 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 4 2 Op 2 . - CDS 8290 - 8832 617 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase - Prom 8941 - 9000 6.5 - Term 8985 - 9023 -0.9 5 3 Op 1 . - CDS 9083 - 9343 192 ## str0010 cell-cycle protein MesJ/Ycf62 family 6 3 Op 2 3/0.100 - CDS 9334 - 10176 546 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 7 3 Op 3 1/0.700 - CDS 10176 - 11468 1371 ## COG2367 Beta-lactamase class A - Prom 11498 - 11557 2.1 8 4 Op 1 5/0.100 - CDS 11596 - 11967 290 ## COG2919 Septum formation initiator 9 4 Op 2 3/0.100 - CDS 11951 - 12226 267 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 12255 - 12314 2.5 10 5 Op 1 . - CDS 12330 - 15530 2693 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 11 5 Op 2 7/0.000 - CDS 15587 - 15916 92 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 12 5 Op 3 14/0.000 - CDS 15909 - 16478 591 ## COG0193 Peptidyl-tRNA hydrolase - Term 16495 - 16529 3.1 13 5 Op 4 4/0.100 - CDS 16551 - 17666 1448 ## COG0012 Predicted GTPase, probable translation factor - Prom 17694 - 17753 10.2 14 6 Op 1 2/0.300 - CDS 17877 - 18068 303 ## COG4481 Uncharacterized protein conserved in bacteria 15 6 Op 2 . - CDS 18120 - 19256 954 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 19341 - 19400 5.6 + Prom 19117 - 19176 5.0 16 7 Tu 1 . + CDS 19255 - 19452 60 ## + Term 19529 - 19563 2.1 17 8 Tu 1 . - CDS 19411 - 20775 994 ## COG0593 ATPase involved in DNA replication initiation - Prom 20808 - 20867 6.2 - Term 20926 - 20956 1.3 18 9 Op 1 2/0.300 - CDS 21014 - 21781 672 ## COG1475 Predicted transcriptional regulators - Term 21790 - 21825 5.3 19 9 Op 2 . - CDS 21847 - 23040 1443 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 23210 - 23269 11.7 + Prom 23023 - 23082 7.5 20 10 Op 1 . + CDS 23276 - 23755 522 ## COG1576 Uncharacterized conserved protein 21 10 Op 2 1/0.700 + CDS 23771 - 24085 282 ## COG3619 Predicted membrane protein 22 10 Op 3 . + CDS 24085 - 24453 336 ## COG3619 Predicted membrane protein - TRNA 24479 - 24552 84.2 # Arg TCT 0 0 + TRNA 24735 - 24806 64.7 # Glu TTC 0 0 + TRNA 24828 - 24901 76.4 # Asn GTT 0 0 - Term 24939 - 24986 13.6 23 11 Tu 1 . - CDS 24998 - 27523 1087 ## COG4485 Predicted membrane protein - Prom 27552 - 27611 6.2 - Term 27591 - 27627 7.4 24 12 Op 1 1/0.700 - CDS 27641 - 29263 1858 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 25 12 Op 2 . - CDS 29330 - 30202 753 ## COG1284 Uncharacterized conserved protein - Prom 30223 - 30282 5.7 26 13 Tu 1 . + CDS 30631 - 31653 1309 ## COG0180 Tryptophanyl-tRNA synthetase + Term 31666 - 31700 -0.0 + Prom 31712 - 31771 5.9 27 14 Tu 1 . + CDS 31831 - 33312 1906 ## COG0516 IMP dehydrogenase/GMP reductase + Term 33324 - 33357 -0.9 - Term 33305 - 33350 10.5 28 15 Op 1 9/0.000 - CDS 33495 - 34595 831 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 29 15 Op 2 . - CDS 34598 - 34975 315 ## PROTEIN SUPPORTED gi|15904072|ref|NP_359622.1| hypothetical protein spr2031 - Prom 35092 - 35151 3.7 + Prom 34971 - 35030 7.5 30 16 Op 1 14/0.000 + CDS 35053 - 36303 900 ## COG0612 Predicted Zn-dependent peptidases 31 16 Op 2 . + CDS 36305 - 37351 509 ## COG0612 Predicted Zn-dependent peptidases 32 16 Op 3 . + CDS 37348 - 37581 84 ## STER_1988 peptidase 33 16 Op 4 . + CDS 37640 - 37921 208 ## str2011 hypothetical protein 34 16 Op 5 . + CDS 37936 - 38196 186 ## str2011 hypothetical protein 35 16 Op 6 . + CDS 38209 - 38406 201 ## str2011 hypothetical protein + Prom 38411 - 38470 2.5 36 17 Op 1 2/0.300 + CDS 38509 - 39051 266 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 37 17 Op 2 15/0.000 + CDS 39120 - 39893 548 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 38 17 Op 3 34/0.000 + CDS 39869 - 40711 450 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 39 17 Op 4 . + CDS 40704 - 41498 410 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters + Term 41548 - 41580 2.0 + Prom 41685 - 41744 7.9 40 18 Tu 1 . + CDS 41795 - 42367 677 ## str2006 hypothetical protein + Term 42419 - 42459 3.2 + Prom 42404 - 42463 8.3 41 19 Tu 1 . + CDS 42551 - 43249 637 ## STER_1981 hypothetical protein + Term 43254 - 43298 8.7 + Prom 43351 - 43410 6.5 42 20 Tu 1 . + CDS 43446 - 43910 436 ## COG1943 Transposase and inactivated derivatives + Term 43974 - 44009 5.6 + Prom 44455 - 44514 6.3 43 21 Op 1 . + CDS 44613 - 45734 1170 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 44 21 Op 2 . + CDS 45754 - 46368 372 ## COG2095 Multiple antibiotic transporter + Term 46427 - 46489 6.5 + Prom 46371 - 46430 1.8 45 22 Op 1 1/0.700 + CDS 46548 - 48449 1945 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 48463 - 48504 1.2 46 22 Op 2 9/0.000 + CDS 48523 - 50487 1430 ## COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain 47 22 Op 3 16/0.000 + CDS 50575 - 50946 300 ## PROTEIN SUPPORTED gi|149003067|ref|ZP_01827976.1| 50S ribosomal protein L9 48 22 Op 4 3/0.100 + CDS 50990 - 52351 1289 ## COG0305 Replicative DNA helicase 49 22 Op 5 . + CDS 52375 - 52677 423 ## COG4466 Uncharacterized protein conserved in bacteria + Term 52785 - 52817 -0.9 + Prom 52786 - 52845 4.1 50 23 Tu 1 . + CDS 52875 - 53486 1032 ## PROTEIN SUPPORTED gi|228478099|ref|ZP_04062710.1| ribosomal protein S4 + Term 53565 - 53599 5.3 - Term 53423 - 53470 3.2 51 24 Tu 1 . - CDS 53555 - 54811 503 ## COG3464 Transposase and inactivated derivatives - Prom 54994 - 55053 7.4 - Term 54871 - 54931 17.0 52 25 Tu 1 . - CDS 55077 - 55322 281 ## STER_1972 hypothetical protein - Prom 55392 - 55451 4.9 + Prom 55300 - 55359 7.6 53 26 Tu 1 . + CDS 55381 - 55743 468 ## COG3759 Predicted membrane protein + Term 55770 - 55810 4.1 54 27 Tu 1 . - CDS 55818 - 56357 507 ## COG1309 Transcriptional regulator - Prom 56409 - 56468 6.5 + Prom 56388 - 56447 10.8 55 28 Tu 1 . + CDS 56485 - 58854 2148 ## COG1511 Predicted membrane protein + Term 58857 - 58903 6.2 - Term 58845 - 58889 7.4 56 29 Op 1 . - CDS 58892 - 59737 817 ## str1992 hypothetical protein 57 29 Op 2 5/0.100 - CDS 59734 - 60318 489 ## COG4709 Predicted membrane protein 58 29 Op 3 . - CDS 60305 - 60631 262 ## COG1695 Predicted transcriptional regulators - Prom 60686 - 60745 13.9 + Prom 60696 - 60755 10.2 59 30 Tu 1 . + CDS 60793 - 61401 371 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 61405 - 61450 3.0 - Term 61713 - 61755 9.8 60 31 Op 1 . - CDS 61879 - 63144 842 ## COG0582 Integrase - Prom 63171 - 63230 5.7 - Term 63163 - 63218 1.6 61 31 Op 2 . - CDS 63232 - 63483 235 ## GALLO_2221 hypothetical protein - Term 63506 - 63544 0.9 62 31 Op 3 . - CDS 63546 - 64883 651 ## LACR_2580 plasmid replication protein Rep and AAA-class ATPase domain - Prom 64943 - 65002 3.1 63 32 Tu 1 . - CDS 65070 - 65348 147 ## Sez_0301 hypothetical protein - Prom 65379 - 65438 4.4 - Term 65743 - 65780 -0.0 64 33 Tu 1 . - CDS 65828 - 66346 380 ## Sez_0302 hypothetical protein - Prom 66456 - 66515 9.2 + Prom 66541 - 66600 7.2 65 34 Tu 1 . + CDS 66712 - 67542 241 ## + Prom 67576 - 67635 5.5 66 35 Tu 1 . + CDS 67734 - 67952 78 ## Predicted protein(s) >gi|311100322|gb|AEKO01000010.1| GENE 1 5141 - 5437 87 98 aa, chain - ## HITS:1 COG:L0454 KEGG:ns NR:ns ## COG: L0454 COG2826 # Protein_GI_number: 15673986 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Lactococcus lactis # 2 58 225 281 315 67 56.0 6e-12 MKLYPIKSITADNGNEFSSLSKIEGLDVYFAHAYSSYERGTNENFNGSLREFIPKGCSLK ELNQNLLEDYTKAINEKRPIRIHGYQSAKKLFELTQTA >gi|311100322|gb|AEKO01000010.1| GENE 2 5443 - 6150 143 235 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 13 220 10 202 317 59 31 7e-24 MSTNYSTTNQSYKHLSEAERGEIEAYLSVGLKPAEITRRLGRNRSTITREINRSSITQVK KVNGQKVYYHHYYADVAHNRYRHAREASYYLKLDCVSDDFLRAFTEAMREKPRVHSVDTF VHTYRLQHVDKVVPSTKTLYNYIHQGLLEIKVIDLPRAVRIRKKITKRPSTNKHLGKSIE ERPEEINNCSRFGDSEIDSVLGGKTIGAPSILNLVERQSQRNSWKRKQSMSIKQS >gi|311100322|gb|AEKO01000010.1| GENE 3 6291 - 8270 1301 659 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 5 647 2 621 636 505 43 1e-142 MNNKNNNGFLRNAFLYIIVIIAVVTGVQYFAGGSQSSSQQLSYTQLVKKIEDGKVKSITY QPDGSIIEIKGSYKKAEKIDTDLSLPFLGSASSETRSFTSTVLQNETTMQKLQSASEAAN VNVKMIRESSSGAWISYLFSYLPLIGIAIFFLFMMNQGGNRGAMNFGRNRAKTQSKENIK VRFTDVAGAEEEKEELVEVVDFLKNPRKYKALGARIPKGVLLEGPPGTGKTLLAKAVAGE ADVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAERAIIFIDEIDAVGRRRGTGMGGGN DEREQTLNQLLIEMDGFDGNENIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGRE AILKVHAKNKPLAEDVDLKVVAQQTPGFVGADLENVLNEAALVAARRSKTRIDASDIDEA EDRVIAGPSKKDRQVSEHERKVVAYHEAGHTIVGLTLSSARDVHKVTIVPRGRAGGYMIS LPKEDQMLSSKDELKEQLAGLMGGRVAEEIIFNVQTSGASNDFEQATQLARAMVTEYGMS EKLGPVQYEGNHAMNPGQFTPDKSYSAHTAQLIDEEIRSLLVEAHNRAAEIINENRDTHA LIAEALLKYETLDAAQIKSIYETGKMPVDSLEDSEGDNHALSFDEVKERLENKNKDEEE >gi|311100322|gb|AEKO01000010.1| GENE 4 8290 - 8832 617 180 aa, chain - ## HITS:1 COG:SP0012 KEGG:ns NR:ns ## COG: SP0012 COG0634 # Protein_GI_number: 15899961 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 179 1 179 180 260 70.0 1e-69 MLEKDIKKILFSQEDIVTKTKELGQQLTKDYAGKNPLLVGVLKGAVPFMAELIKHIDTHI EMDFMVVSSYGGGTVSSGEVKILKDVDTNVEGRDIIFIEDIIDTGRTLLYLRDMFKYRKA NSVKIATLFDKPEGRVVDIEADYVCYDVPNEFIVGFGLDYDEKYRNLPYVGVLKEEIYTK >gi|311100322|gb|AEKO01000010.1| GENE 5 9083 - 9343 192 86 aa, chain - ## HITS:1 COG:no KEGG:str0010 NR:ns ## KEGG: str0010 # Name: not_defined # Def: cell-cycle protein MesJ/Ycf62 family # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 86 279 364 421 154 87.0 7e-37 MPLKNGYVLVKTQTDFLITKEESILLSPPSLLEFGKSIVFEEHTLIFSEPYIVSNVNTIN IWSDAPILIRHRHEGDMIDLGTHHKK >gi|311100322|gb|AEKO01000010.1| GENE 6 9334 - 10176 546 280 aa, chain - ## HITS:1 COG:SPy0013 KEGG:ns NR:ns ## COG: SPy0013 COG0037 # Protein_GI_number: 15674260 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Streptococcus pyogenes M1 GAS # 3 276 5 278 428 305 57.0 7e-83 MTEKLLQMIQAKGYFNQHKKILVAVSGGADSMSLLHFLYNHQKDLDIQLGIAHVNHKQRQ ESEYEEDYLRHWAKEHKIPFHYSAFSGKFSENAARTFRYDFFKQIMKEADYSALVTAHHA DDQAETIFMRLLRGSRLRHLSGICDVRSFGTGQIIRPFLHIPKAQLPITFHFEDKSNSSL AYLRNRIRLTYIPTLSQENPKFKEHLCLLADEIALMEKALEELTKDITITDLSVFQQQTD AVQYLLIQSYLESFPDLQLSKGQFNQLMSYLRKKLQERCH >gi|311100322|gb|AEKO01000010.1| GENE 7 10176 - 11468 1371 430 aa, chain - ## HITS:1 COG:SPy0012 KEGG:ns NR:ns ## COG: SPy0012 COG2367 # Protein_GI_number: 15674259 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Streptococcus pyogenes M1 GAS # 1 430 1 428 428 370 47.0 1e-102 MKKLLIAATAVLVSSSPLILLPMEKELTLTSKQVQKLAQNTTVSLSQFKQIPKNPRTVTS ILTYKNKELTDFKNNIQADTKLSISAISWNAKGEPVFQLQDGDYVAASQKSIIDDSVYDQ KPVDMTLWTKDGLTVYKEPYVSGTDKADSKLASFKPIKVSRAAQTHAGTYYFADGEGWIN ASDLSTTDNRIEAVQKVLNEKYNNQESISVYVKQLDTDRIAAINDEKSMYAASVAKLGVL YYTQERLSQKKLSLSDEYQYTSAVNGFPGAYDPDGSGKISKMPDDKNYSLENLLKAVAQN SDNVATNILGYYVANQYDNSFQKSVDEAAATSWNMDKKELTAKAAGTLMEAVYRQNGDII NYLSSTDYDGERISKNIDVPVAHKIGDAYDFKHDVAIVYTDSPFILSIFTDKEGYDKITS IADDVYGILK >gi|311100322|gb|AEKO01000010.1| GENE 8 11596 - 11967 290 123 aa, chain - ## HITS:1 COG:SPy0010 KEGG:ns NR:ns ## COG: SPy0010 COG2919 # Protein_GI_number: 15674258 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Streptococcus pyogenes M1 GAS # 3 123 2 122 123 129 57.0 1e-30 MSKKPNIVQLTNDYIDNANQEQRLERAEHEQRNRFMGWILFVVVLLFILPTYNLVETYMN IKQQEKEVLSFQKDYDKLSDQTKERKDLAKKLKDDTFAEKYARAKYYYSREGESIYPVPS LLP >gi|311100322|gb|AEKO01000010.1| GENE 9 11951 - 12226 267 91 aa, chain - ## HITS:1 COG:SP0007 KEGG:ns NR:ns ## COG: SP0007 COG1188 # Protein_GI_number: 15899956 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Streptococcus pneumoniae TIGR4 # 1 87 1 87 88 113 87.0 7e-26 MRLDKYLKVSRIIKRRPVAKEVADKGRIKVNGVLAKSSTDLKIGDQVEVRFGNKLLTVRV LEMKDSTKKEDAAKMYEIISETRIEADEQEA >gi|311100322|gb|AEKO01000010.1| GENE 10 12330 - 15530 2693 1066 aa, chain - ## HITS:1 COG:SPy0008 KEGG:ns NR:ns ## COG: SPy0008 COG1197 # Protein_GI_number: 15674256 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Streptococcus pyogenes M1 GAS # 1 1040 128 1167 1167 1523 74.0 0 MPNPEVYKDSRIDLTLGEEHDLEALSKHLTHIGYQRVEQVLSPGEFSRRGDILDIYELTA ELPYRLEFFGDEIDGIRQFDSDSQKSLNNLDHVVISPADDIILTREDYQRAEKALESAVS KAEGPHKAYLEEVLSVTIDGYRHKDLRKFLSLFYDKAYTLFDYLPKGTPVFVDDFQKIVD RHGRLELEVANLLTEDLHQGKSLSYLNYFVDSFKTLRNYQPASFFSNFHKGLGNLKFDKL YQFTQYPMQEFFNQFPLLVDEIHRYTKNKATVILQVGSEKQLKSLKETLEEYDLDLPLSR FGDLIPYKPQLVLGNLSNGFYFADEKLVLVTEREIFHKKVKRRARASHVSNAERLKDYNE LEKGDYVVHQTHGIGQFKGIETIEIKGVHRDYLTIQYQDAATISLPVEQIESLSKYVSAD GKEPKINKLNDGRFQKTKQKVSKQVEDIADDLLKLYAERSQLKGFAFSPDDDNQRDFDDD FSYAETVDQLRSIKEVKEDMESDKPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILV PTTVLAHQHYLNFKERFENHAVEVDELSRFRSKKEQNETIENLAKGRIDIIIGTHRLLSK DVKFSDLGLLVIDEEQRFGVKHKEKLKELKAKVDVLTLTATPIPRTLHMSMLGIRDLSII ETAPTNRYPVQTYVMETNPGLIREAILREMDRGGQIFYIYNRVETIDKKVSELHELVPEA RIGFVHGQMSEVMLENTLLDFLNGDYDVLVATTIIETGIDISNVNTLFIENADHMGLSTL YQLRGRVGRSNRIAYAYLMYRPDKVLTEVSEKRLDAIKGFTELGSGFKIAMRDLSIRGAG NILGSSQSGFIDSVGFEMYSQLLEEAINKRQGKTQVRRKGNAEFNLQIDAYLPYDYISDE RQKIEIYKRIREIENQKDYQDLQDEIIDRFGEYPDQVAYLIEIGLVKAYLDAAFAELVER KNDTITVRFEKSSLKFFLTQDYFEAISKTHLKAKISDNQGKVEIIFDVRNKKDYEILEEL KIFGQTFMEIKKRKEKKKLKESLSKSLYTIKHPKTFLFHKSPERVD >gi|311100322|gb|AEKO01000010.1| GENE 11 15587 - 15916 92 109 aa, chain - ## HITS:1 COG:SPy0008 KEGG:ns NR:ns ## COG: SPy0008 COG1197 # Protein_GI_number: 15674256 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Streptococcus pyogenes M1 GAS # 5 83 3 81 1167 77 48.0 8e-15 MANTLLDLFEKNHQLLEWRDKISLLSRQLVMGFSGSSKAVVMASALSEQVPKILIVTSTQ NEAEQLTGDLSAILGEDKVYSFLRMMYQLQSLSSLLQKRPILVSKVLIF >gi|311100322|gb|AEKO01000010.1| GENE 12 15909 - 16478 591 189 aa, chain - ## HITS:1 COG:SPy0007 KEGG:ns NR:ns ## COG: SPy0007 COG0193 # Protein_GI_number: 15674255 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 189 1 189 189 265 68.0 4e-71 MTKLVVGLGNPGSKYHETRHNVGFMAIDLIAKKLGLTFSEEKTFKAEVASTFLNGEKVYF VKPTTFMNLSGLAVRALLAYYNIPMEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSII AETGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETALNHYLKTNDF EDTMRRYNG >gi|311100322|gb|AEKO01000010.1| GENE 13 16551 - 17666 1448 371 aa, chain - ## HITS:1 COG:SPy0006 KEGG:ns NR:ns ## COG: SPy0006 COG0012 # Protein_GI_number: 15674254 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Streptococcus pyogenes M1 GAS # 1 371 1 371 371 649 94.0 0 MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLTKLTELITP KKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGRED AFVDPMADIDTINLELILADLESINKRYARVEKIARTQKDKDSVAEFNILQKIKPVLEDG KSARTIDFTEEEQKIVKGLFLLTTKPVLYVANVDEDQVANPDDIDYVKQIREFAATENAE VVVISARVEEEISELDDEDKEMFLEDLGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRA WTFKRGIKAPQAAGIIHSDFEKGFIRAVTMSYDDLIKYGSEKAVKEAGRLREEGKEYVVQ DGDIMEFRFNV >gi|311100322|gb|AEKO01000010.1| GENE 14 17877 - 18068 303 63 aa, chain - ## HITS:1 COG:SPy0004 KEGG:ns NR:ns ## COG: SPy0004 COG4481 # Protein_GI_number: 15674253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 63 1 63 65 102 79.0 2e-22 MYQIGSLVEMKKPHACTIKATGKKANEWEVTRLGADIKIRCTNCDHVVMMGRHDFEKKLK KVL >gi|311100322|gb|AEKO01000010.1| GENE 15 18120 - 19256 954 378 aa, chain - ## HITS:1 COG:SPy0003 KEGG:ns NR:ns ## COG: SPy0003 COG0592 # Protein_GI_number: 15674252 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Streptococcus pyogenes M1 GAS # 1 378 1 378 378 511 73.0 1e-144 MIQFAINKAYFLQALHTTRRAISSKNAIPILSTIKIEVTSDSIYLTGSNGQISIENSISA SEENAGLLITRPGSILLEANFFINVVSSLPDVTLTFEEIEQYQVLLKSGKSEITLKGKDV EQYPRIQEVDSLTPLVMDTKVLKSIIAETSFAASTQESRPILTGVHFVLSNHKDLKAVAT DSHRMSQRQLVLEHSSDNFDVVIPSRSLKELSAVFSDGIENLEIFFSANQILFRSETISF YTRLLEGNYPDTNRLLSDSFETEVVFETASLRSAMERSYLISNSSQSGTVKLEIINGNVS AHVNSPEVGKVNEDIDVQDVSGSDLVISFNPTYLIDALKALKSETVRVRFISPVRPFTLT PADDSENFIQLITPVRTN >gi|311100322|gb|AEKO01000010.1| GENE 16 19255 - 19452 60 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMLLYFINIMLVAVVGLVDIVHKYLNHSFIKILDLCTSCGKVCIIFSSYPQVLFYLVFDG INFNA >gi|311100322|gb|AEKO01000010.1| GENE 17 19411 - 20775 994 454 aa, chain - ## HITS:1 COG:SPy0002 KEGG:ns NR:ns ## COG: SPy0002 COG0593 # Protein_GI_number: 15674251 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Streptococcus pyogenes M1 GAS # 1 454 1 451 451 669 74.0 0 MTEKEHFFWNKLLELAKEELTQATFDYYVLDTKLIKIQDNVATILLEEVKKLFWEKNMQS FILMTGFEVYNSEIKVEYVFDEALVSEIKPTLSSNDFSNKREQQTPALPTLNSDLNSKYT FDNFIQGDENRWSVAASLAVADSPGATYNPLFIYGGPGLGKTHLLNAIGNKVLHDNPQAR IKYITAENFINEFVLHIRLDKMDELKLKYRHLDVLLIDDIQSLAKKSTQATQEEFFNTFN VLHDNNKQIVLTSDRNPDQLNEMEERLVTRFKWGLTVNITPPDFETRVAILTNKIMDYDY HFPPETIEYLAGQFDSNVRDLEGALKDISLVANVRQLDTITVEVAAEAIRARKIDGPKLT LIPIEDIQSEVGKFYNVTVKEIKATKRTQNIVLARQVAMYLAREMTDNSLPKIGKEFGGR DHSTVLHAYNKIKNMLAQDDSLRIEIDTIKNKIK >gi|311100322|gb|AEKO01000010.1| GENE 18 21014 - 21781 672 255 aa, chain - ## HITS:1 COG:SPy2217 KEGG:ns NR:ns ## COG: SPy2217 COG1475 # Protein_GI_number: 15675946 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 254 14 267 268 244 55.0 1e-64 MSEQLKTLPISEIYPNPFQPRLEFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAG ERRLRACKRLGMTEIPAVVKKVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELAYS HEELAKAMGKSRPYISNTLRLLQLPREIQTSIENGSLSQGHARALLAIEDSRKQLTIFQQ VVAERWSVRTLEKKLQELPRKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKTHSGTIQIH FSTEEDFNRIINKLI >gi|311100322|gb|AEKO01000010.1| GENE 19 21847 - 23040 1443 397 aa, chain - ## HITS:1 COG:SPy2216 KEGG:ns NR:ns ## COG: SPy2216 COG0265 # Protein_GI_number: 15675945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Streptococcus pyogenes M1 GAS # 1 396 13 404 407 400 62.0 1e-111 MLVIGLLGGLLGAFILLTAAGVSFTNTTDTGIKTAKTVYSNTTDTTKAVKKVQNAVVSVI NYQEGSSSDSLNDLYGRIFGGDDNSDSSQDKSKNSDGLQVAGEGSGVIYKKDGKEAYIVT NNHVVDGAKKLEIMLSDGSKITGELVGKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGE KAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQTDAAINPGNSGGALV NIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMA DLNSLSSSTTSKLDLPDKVKSGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQT NLYSHSIGDTIKVTFYRGKDKRTEDLKLTKSTEDLSD >gi|311100322|gb|AEKO01000010.1| GENE 20 23276 - 23755 522 159 aa, chain + ## HITS:1 COG:SPy2215 KEGG:ns NR:ns ## COG: SPy2215 COG1576 # Protein_GI_number: 15675944 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 159 1 159 159 224 72.0 5e-59 MKVKLITVGKLKEKYLKDGIAEYIKRLGRFTKFESIELMDEKTPDNASEAENKAILDKEG QRILAKVGDRDYVIALAIEGKQFPSEQFAKELEQAALRGYSDITFIIGGSLGLSPKVKKR ANQLMSFGLLTFPHQLMRLVLVEQIYRAFMIQQGSPYHK >gi|311100322|gb|AEKO01000010.1| GENE 21 23771 - 24085 282 104 aa, chain + ## HITS:1 COG:SPy0421 KEGG:ns NR:ns ## COG: SPy0421 COG3619 # Protein_GI_number: 15674550 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 83 1 83 235 76 42.0 1e-14 MFKMKKRSYRVFEGLRVATLVSYMGGFIDAYTYNTQDGRFASIQTGNLLYLVIHLVEGHI ARAFSYVIPIFFFVLGQFFVFLLRSGLLTINGDGICKRLDLPFS >gi|311100322|gb|AEKO01000010.1| GENE 22 24085 - 24453 336 122 aa, chain + ## HITS:1 COG:SPy0421 KEGG:ns NR:ns ## COG: SPy0421 COG3619 # Protein_GI_number: 15674550 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 5 113 110 218 235 83 42.0 1e-16 MTILAIITPYVDSTITIAGLAFFASLQVGIFKRVRGVNYASFMMTGNITNTSLTVARAIG ESDPKVLKQASYTTIIIFTFMVGVAASTWFAQYLYEYSLYTTLLPLFILNYFLFIEAKEK RN >gi|311100322|gb|AEKO01000010.1| GENE 23 24998 - 27523 1087 841 aa, chain - ## HITS:1 COG:SP2231 KEGG:ns NR:ns ## COG: SP2231 COG4485 # Protein_GI_number: 15902035 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 830 22 843 850 714 48.0 0 MIGVLYCQKIYPGSERTILTSDGFHQYVIFATGLRNILHGDGSLFYTFTSGLGLNFYALT SYYLGSFLSPLYYFFTVNQMADAFYYITLLKFGLIGLSGAFSFKRLFTKVSRSFILCLST GFSLMSFATSQLEINTWLDAFILAPLIILGLHLLLRFNRRGLYFFSLTCLFIQNYYFGYM MAIFLTLYTIVQLITIKGWKSKILHFIDFGIISILAGLSSAAMLLPTLLDLTTHGEKFTG ASSLLTESTYYFDFFAKNLVGVYDTTKFGSIPMIYVGILPLILFLLFFISREVKLSLRLG YLLLVAFFIASFYLQPLDLFWQGMHAPNMFLHRYSWLLSLLIVLLAGEILNRIKNFSFKR LLLSFLVLSTSYLLTWIFQSHYSFIESVSWLLSLAFLLAYAILFISYFRQQIPGSVFRCF TFLFCIFELALSTYYVVGALGNEWVFPTREGYLRNMSSITKLVSDTKQANKTFYRTERLE AQTGNDSMKFNYYGISQFSSIRNTASSSTLDRLGFKSEGTNLNLRYQNNTIIADSLFGIK YNLSNFDINKYGFNHVTSEKTMGLYQNNNASQLAILTDGIYNNIDLTVNTLDNQTSLLNA LSGLNLNYFKRVPSQLFDQDAKSLNQRVAKNVSNSNKDFVTITYRVIAPPHSQLYVSVPN ISWSDDNNHSLSITVNGVTRNQVTDNTFDFFDLGYFETESMVTIKLSFPGNKAISFDNPS FYALDTKNYQIAMDTINDRDSKVTTSNNKVFVDYSSKTNASLFFTIPYDKGWTATINHKK VKIQRAQKGFMKVDVPSGKGKVVLTFIPYGLKTGLLISLLASIIFCCYAYFIRKITIIRN S >gi|311100322|gb|AEKO01000010.1| GENE 24 27641 - 29263 1858 540 aa, chain - ## HITS:1 COG:SPy2210 KEGG:ns NR:ns ## COG: SPy2210 COG0488 # Protein_GI_number: 15675942 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 538 1 538 539 969 93.0 0 MLTVSDVSLRFSDRKLFDDVNIAFTPGNTYGLIGANGAGKSTFLKILAGDIEPTTGHISL GPDERLSVLRQNHFDYEEERVIDVVIMGNERLYDIMKEKDAIYMKEDFSDEDGVRAAELE GLFAELGGWEAESEASQLLQNLNISEDLHYQNMSELANGDKVKVLLAKALFGKPDVLLLD EPTNGLDIQSISWLEDFLIDFENTVIVVSHDRHFLNKVCTHMADLDFGKIKLYVGNYDFW KQSSELAARLQADRNAKAEEKIKELQEFVARFSANASKSKQATSRKKMLDKIELEEIVPS SRKYPFINFKAEREIGNDLLTVENLTVKMDGETILDNISFILRPGDKTAIIGQNDIQTTA LIRALADDIDYEGTIKWGVTTSRSYLPKDNSKDFASGESILEWLRQFAEKGEDDDTFLRG FLGRMLFSGDEVNKSVSVLSGGEKVRVMLSKLMLLKSNVLLLDDPTNHLDLESISSLNDG VRDFKESVIFASHDHEFIQTIANHIVVVSKNGVIDRIDETYDEFLENEEVQAKVKALWAD >gi|311100322|gb|AEKO01000010.1| GENE 25 29330 - 30202 753 290 aa, chain - ## HITS:1 COG:SPy2209 KEGG:ns NR:ns ## COG: SPy2209 COG1284 # Protein_GI_number: 15675941 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 290 1 290 290 266 53.0 4e-71 MKRRIIDILLVTLGSFIAAVSYNSLLVKNNIASGGVGGLAISLNALFGWNNANFVLATTI PLLILCWCFLGREVLLKTFYGSLVFPTFIKLTEGLPTLTKQPLLAAIFGGIVLGLGLGIV FYGNSSTGGTGIITQILNKYTPLPLGMVLLIVDGIIVAISAIAFPPDTVMYSILSLGVVS LTIDKMMVGLNSSRNLLIISQNSEQILNYITRVADRGATKIPILGGHTGHAQNMIMTTLS TREVPKVQGEIQKIDETAFIVIVPASTVMGRGFSLQKDYQRVPNDFINPL >gi|311100322|gb|AEKO01000010.1| GENE 26 30631 - 31653 1309 340 aa, chain + ## HITS:1 COG:SPy2207 KEGG:ns NR:ns ## COG: SPy2207 COG0180 # Protein_GI_number: 15675940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 340 1 340 340 606 88.0 1e-173 MAKPIILTGDRPTGKLHLGHYVGSLKNRVLLQNEDKYNMFVFLADQQALTDHAKESEIIK ESIGNVALDYLSVGLDPAKSTIFIQSQIPELAELTMYYMNLVSLARLERNPTVKTEIAQK GFGESIPTGFLVYPISQAADITAFKANYVPVGNDQKPMIEQTREIARSFNHTYNCDILVE PEGIYPENEAAGRLPGLDGNAKMSKSLGNGIFLSDDEDTVRKKVMSMYTDPNHIRVEDPG QIEGNMVFHYLDIFGREEDAVTIAEMKEHYQRGGLGDVKTKRYLLEILERELTPIRERRL EYAKDMGEVFHMLENGSQAAREVAGQTLAEVKEAMGINYF >gi|311100322|gb|AEKO01000010.1| GENE 27 31831 - 33312 1906 493 aa, chain + ## HITS:1 COG:SPy2206_3 KEGG:ns NR:ns ## COG: SPy2206_3 COG0516 # Protein_GI_number: 15675939 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Streptococcus pyogenes M1 GAS # 208 493 1 286 286 503 93.0 1e-142 MSNWDTKFLKKGYTFDDVLLIPAESHVLPNNVNLKTKLAKNLTLNIPIITAAMDTVTDSK MAISIARAGGLGVIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPEHKVAEAEELMQRY RISGVPIVETLENRKLVGIITNRDMRFISNYDTKISEHMTSEKLVTAPVGTDLETAESIL HEHRIEKLPLVDEEGRLSGLITIKDIEKVIEFPNAAKDEFGRLLVAGAVGVTSDTFERAE ALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPDRTLIAGNIATAEGARALYEAGVDVV KVGIGPGSICTTRVVAGVGVPQVTAIYDAASVAREYGKTIIADGGIKYSGDIVKALAAGG NAVMLGSMFAGTDEAPGETEIFQGRKYKSYRGMGSIAAMKKGSSDRYFQGAVNEANKLVP EGIEGRVAYKGSAADIVFQLIGGIRAGMGYTGAEDIQALHDKAQFVEMSGAGLIESHPHD VQITNEAPNYSAH >gi|311100322|gb|AEKO01000010.1| GENE 28 33495 - 34595 831 366 aa, chain - ## HITS:1 COG:SP2227 KEGG:ns NR:ns ## COG: SP2227 COG1195 # Protein_GI_number: 15902031 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Streptococcus pneumoniae TIGR4 # 1 358 1 358 365 461 64.0 1e-130 MWLEKIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKEL IQFQQNTLKLNGIVHRHSGKLPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVILFAPEN LQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQRNAYLKSTDNVDINFLSVLDE QLSDFGTRVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPLENNNVIRESFLT TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVT GEFPILLLDDVMSELDNHRQLKLLESIGEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGNI YEKQVD >gi|311100322|gb|AEKO01000010.1| GENE 29 34598 - 34975 315 125 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15904072|ref|NP_359622.1| hypothetical protein spr2031 [Streptococcus pneumoniae R6] # 1 124 1 121 122 125 54 5e-28 MEYKLFDEYITLQALLKELSIIHSGGAIKGFLAKNTVLFNGEDEKRRGKKLRYGDVITIP SKELEITIVAPTTNEIEKHQKAVAEKARVAAIVKKMNQDNKKKQKAHPSKESNKTKRNPV RFPGT >gi|311100322|gb|AEKO01000010.1| GENE 30 35053 - 36303 900 416 aa, chain + ## HITS:1 COG:SPy2199 KEGG:ns NR:ns ## COG: SPy2199 COG0612 # Protein_GI_number: 15675932 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Streptococcus pyogenes M1 GAS # 1 415 1 414 414 405 48.0 1e-113 MKIADGVYVHFIPTQKYKTNRIVFRMTGSLNKQTIAKRALVSQMLATANQTYPTVQSFKE RLASLYGTQLSTRVSTKGLTHSVDIELTYLKDAFIPTNDGLFWEVLGFLKECLYKPLSRV AQYQNKVFDIEKQNLMTYLDVDTENNYYYSEVKGRELYFVNEGLKVPKYGQAELVEAETS FTAYQEFQSMLTRDRIDIFMVGEFDDYQVLQALHRFPLEGRQVDLQFSYSQPYVNVVKEK IEPRQSSQSILHLGYQFPCQYGDKHYFALIVLNAMFGEFAHSVLFTTLREKEGLAYSISS QFDIFTGLLEVYAGIEKSNRNQAMRGISRELNYIKLGRFSSSLLNQTKKIIRMNALLSED HSLTLVEQRFNKVIFGDKSLSLENWLDEIEKVTKKDVCRVARQVKLQSLFFLEGVS >gi|311100322|gb|AEKO01000010.1| GENE 31 36305 - 37351 509 348 aa, chain + ## HITS:1 COG:SPy2198 KEGG:ns NR:ns ## COG: SPy2198 COG0612 # Protein_GI_number: 15675931 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Streptococcus pyogenes M1 GAS # 1 342 1 344 429 273 43.0 5e-73 MPALKKRYYQKIDEEVYSAILDNGMSLSIIKKKGFLEKAAFLSTNFGALDNHFYIDGELQ SYPAGIAHFLEHKLFEDEQGRDVTLDFVKLGADVNAFTTLDKTTYYFSTLDHFEESLELL LKFTSKFTSSEDAVNHEKRIIEQEINMYQDDPDYRVYLGCLQSLYPNTILGRDIAGSVDS IEKITVNDLEDNFDCFYRPANCHLVLVGDFDVEDIYTFVNEKQSEFTLPERIVEKEKNPI ESDVQKLDSLQMEIFISKLAIGFKSVPFTDNRMRENILVQLLFNLLFGWTSPYYQKWYAE GKIDESVSIEYEVSSRYSFVIMTMGTAEPIRMSSLIRQVMTSADKKDC >gi|311100322|gb|AEKO01000010.1| GENE 32 37348 - 37581 84 77 aa, chain + ## HITS:1 COG:no KEGG:STER_1988 NR:ns ## KEGG: STER_1988 # Name: not_defined # Def: peptidase # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 77 349 425 425 125 85.0 4e-28 MTDEALDLQKKALYGEFLRSLDNIQNLGSQYLAYFENDKTYFDFGQELMGITSKELKDFL NHYLSNMEITDFVVFPK >gi|311100322|gb|AEKO01000010.1| GENE 33 37640 - 37921 208 93 aa, chain + ## HITS:1 COG:no KEGG:str2011 NR:ns ## KEGG: str2011 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 91 1 91 285 125 76.0 7e-28 MKLHSLGEQLRAARIKKELSLYDVEKISGVEAQFLLAMEMDQLKALPEDIQQEALEKYAT SVGLDGKRLFEEQRQNEQKLKKRRNQLNVRKIP >gi|311100322|gb|AEKO01000010.1| GENE 34 37936 - 38196 186 86 aa, chain + ## HITS:1 COG:no KEGG:str2011 NR:ns ## KEGG: str2011 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 86 100 185 285 139 93.0 5e-32 MSRFLKHKREEKRKSNYLPLLILSAVSLLIICSVGYIIIRHLSNQPQVIKLNTISTVNHL SIVGGAKSSRSISEVTVSGANVTTTT >gi|311100322|gb|AEKO01000010.1| GENE 35 38209 - 38406 201 65 aa, chain + ## HITS:1 COG:no KEGG:str2011 NR:ns ## KEGG: str2011 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 64 191 254 285 98 95.0 5e-20 MVDFSNVKSSVVLEVELSENSNDTWFSVDNSDTSESYYLSKTNESKYSLDFSDKIKTTQI IIAQS >gi|311100322|gb|AEKO01000010.1| GENE 36 38509 - 39051 266 180 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 9 171 484 665 904 107 36 2e-22 MFKKENLPNLLTLARIVLIPIFLLMTSLASSNVMHIAAAVVFAIASITDYLDGYLARKWH VVTNFGKFADPLADKMLVMSAFIMLVGINQAPAWVVSVIICRELAVTGLRLLLVENGGTV LAAAMPGKIKTVTQMLSIILLLCHVHFVGTIMLYVALFFTIYSGYDYFKGAGFLFKDTFK >gi|311100322|gb|AEKO01000010.1| GENE 37 39120 - 39893 548 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 1 238 147 384 398 215 48 5e-55 LNDVSFHVKRGEWLSIVGHNGSGKSTTARLIDGLLVAESGQIIVDGQELTEENVWDIRDK IGMVFQNPDNQFVGATVEDDVAFGLENKGVPYEEMASRVQEALEFVGMSEFKDREPARLS GGQKQRVAIAGIVAMRPSILILDEATSMLDPEGRQELIQSIKAIRKEYGMTVLSITHDLD EVALSDRVLVLKKGKVESVSSPRELFSRGSELVDLGLDIPFSALLTKKLRNKGLIDCEDY LTEKELVEQLWESLSKM >gi|311100322|gb|AEKO01000010.1| GENE 38 39869 - 40711 450 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 4 277 131 396 398 177 40 1e-43 MGISLENVSYIYQAGTPFEGRALFDMTTTIKDGSYTAFIGHTGSGKSTIMQLLNGLYLPT SGQVHVDDTIITSQSKNKDIKPIRKKVGLVFQFPESQLFAETVLEDVAFGPQNFGVSKEE AEQRAIESLKLVGLPEEFHGQNPFDLSGGQMRRVAIAGILAMQPDILVLDEPTAGLDPQG RKELMSLFKELHLSGMTIVLVTHLMDDVADYATAVNVMEKGQLVLSGTPKDVFQKVTFLK EKQLGVPKITEFALELQEKGYSFESLPITIEEFVEVLVHG >gi|311100322|gb|AEKO01000010.1| GENE 39 40704 - 41498 410 264 aa, chain + ## HITS:1 COG:SPy2193 KEGG:ns NR:ns ## COG: SPy2193 COG0619 # Protein_GI_number: 15675926 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 1 252 1 252 266 323 77.0 2e-88 MDKLIIGRYIVGDSFIHRLDPRSKLLSMLIYIVIIFWANNPLTYAVITLFTLFLVFLSKI KLSFFLGGIKPMIWIILFSTLFQVFFNTRGSVLWSIGFFKITEVGLNQGWMIFLRFILII SFSTLLTLTTTPLSLSDAVELLLKPLTIFKVPAHEIGLMLSLSLRFVPTLMDDTTRIMNA QKARGVDFGEGNIIQKVRSIIPILVPLFASSFKRADALAIAMEARGYQGGEGRTRYRRLL WNGRDTLSIAAIVTLGLILFYLKS >gi|311100322|gb|AEKO01000010.1| GENE 40 41795 - 42367 677 190 aa, chain + ## HITS:1 COG:no KEGG:str2006 NR:ns ## KEGG: str2006 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 190 1 184 184 235 87.0 7e-61 MQTKNTFNTKKLGLFGLVTVATLGATALANAETYTVQKGDTLSAIAKKNGTTVDEIVSRN GIQDANKISIGQNLTINETTEEPAEPSATTEAAVESTQSTESTQSEDTQATNTTLSSSEA AAKEEIAQRESSGSYTAQNGQYYGRYQLASSYLNGDLSPENQEKVADNYVASRYGSWTAA LAFWNAHGWY >gi|311100322|gb|AEKO01000010.1| GENE 41 42551 - 43249 637 232 aa, chain + ## HITS:1 COG:no KEGG:STER_1981 NR:ns ## KEGG: STER_1981 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 19 232 1 209 209 180 78.0 3e-44 MFKKSYKGRRIKLAAKKSLAVPVAIVTSFIVILGVSLSTLVNKGLVNAFSDSVTPAPSTA STTSESTADLVKSTEISSSKDNKANKEKVEESKPQSETTGEAVEAAEKSQSYTATKSTTT TSTDTTSTQNTITAPSVVASGSGSVVLSNGNTAGEIGSYAAAQMAAATGVSQSTWESIIA RESNGDHTVANSSGASGLFQTMPGWGSTVTVEDQIQSALNAYNAQGLSAWNY >gi|311100322|gb|AEKO01000010.1| GENE 42 43446 - 43910 436 154 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 7 149 5 147 157 192 60.0 2e-49 MAQKAHSLSHTKWMCKYHIVFTPKYRRKIIYNQYRSSLGEIFHRLCQYKGVEIIEGHLMP DHVHMLVSIPPRMSVASFMGYLKGKSALMMFDKHANLKYKFGNRHFWAEGYYVSTVGLNE ATIKKYIQEQEKHDIALDKLSVKEYENPFRDNGK >gi|311100322|gb|AEKO01000010.1| GENE 43 44613 - 45734 1170 373 aa, chain + ## HITS:1 COG:SPy2188 KEGG:ns NR:ns ## COG: SPy2188 COG0482 # Protein_GI_number: 15675922 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Streptococcus pyogenes M1 GAS # 1 373 1 373 373 675 91.0 0 MTDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVA AVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLG ADYVATGHYAQVVRDEDGIVHMLRGADNNKDQTYFLSQLSQEQLQKTMFPLGHLQKPEVR EIAERVGLATAKKKDSTGICFIGEKNFKEFLSQYLPAQKGRMMTVDGRDMGEHNGLMYYT IGQRGGMGIGGQKGGDNAPWFVVGKDLSKNILYVGQGFHHESLMSTSLDASMIHFTRDMP EEFEMECTAKFRYRQPDSKVTVKVKGDKAEVIFAEPQRAITPGQAVVFYDGQECLGGGII DQAYKDGKVCQYI >gi|311100322|gb|AEKO01000010.1| GENE 44 45754 - 46368 372 204 aa, chain + ## HITS:1 COG:YPO2181 KEGG:ns NR:ns ## COG: YPO2181 COG2095 # Protein_GI_number: 16122411 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Yersinia pestis # 9 201 15 209 214 105 33.0 5e-23 MSFQLFYAFMAFFAIMNPISNLPAYMALVADDSQKISRKIAFRSLLIAFVIITVFIFSGD FIFKVFGITIVSFRIAGGILVAVIGYHMINGNHSPSYKGMEQQAVNSDPMSIAISPLAMP LFAGPGTITTALSLANGGLRNQLITVVAFALLCVITYLLLRSAKQIADFLGKNLMKIITK MMGLLLFSIGIQMIIVSVQTLIKQ >gi|311100322|gb|AEKO01000010.1| GENE 45 46548 - 48449 1945 633 aa, chain + ## HITS:1 COG:SPy2185 KEGG:ns NR:ns ## COG: SPy2185 COG0445 # Protein_GI_number: 15675920 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Streptococcus pyogenes M1 GAS # 1 631 1 631 632 1146 90.0 0 MSYEFDENFDVIVVGAGHAGVEASLAAARMGCKVLLATINLEMLAFMPCNPSIGGSAKGI VVREIDALGGEMGKNIDKTYIQMKMLNTGKGPAVRALRAQADKALYAMTMKHTVERQENL TLRQSMVDEILVEDGKVVGVRTATNQKYGAKAVVVTTGTALRGEIILGELKYSSGPNNSL ASVTLADNLKELGLEIGRFKTGTPPRVKASSINYEETEIQPGDEKPNHFSFLSKDEDYLL DQIPCWLTYTNQESHDIINNNLHRAPMFSGIVKGVGPRYCPSIEDKIVRFADKNRHQLFL EPEGRETEEVYVQGLSTSLPEDVQKELIHSIKGLEKAEMMRTGYAIEYDIVLPHQLRATL ETKLISGLFTAGQTNGTSGYEEAAGQGLVAGINAALKVQGKPELILKRSDAYIGVMIDDL VTKGTLEPYRLLTSRAEYRLILRHDNADMRLTPIGREVGLVDDERWSIFEIKKNQFDSEL TRLSKEKLKPIKETNEKIQALGFKPLTDAMTAKEFMRRPEIDYATATQFVGPAAEDLDAK VIELLETEIKYEGYINKALDQVAKMKRMEEKKIPKNIDWDAIDSIATEARQKFKKINPET IGQASRISGVNPADISILMVYLEGNNKARRKVE >gi|311100322|gb|AEKO01000010.1| GENE 46 48523 - 50487 1430 654 aa, chain + ## HITS:1 COG:SPy2184 KEGG:ns NR:ns ## COG: SPy2184 COG3887 # Protein_GI_number: 15675919 # Func_class: T Signal transduction mechanisms # Function: Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain # Organism: Streptococcus pyogenes M1 GAS # 1 654 1 655 658 759 60.0 0 MKRFHFATIHLVMIGLILFGIATIFVRVLQSESALIFALFIIMVVVVALLHYQKTTYESL EIEQLDELNQDVEDSLKTLLGKMPVGVITFDENDHIEWFNPYAKLVLSDEYGNFNKQLIA DFISQKRKGSPSNVITVGDNKYAAFVDFDNKLTYFIDNVYDQDENVDPNMTRPVIGIISV DNYDDVTGSLPDADVSKINTFVAGFISEFAKSKHIHYRRIEGDRFYFFTNYSVLTEFMDQ KFSVLDDFRQQAQERGLPLTLSMGISFGTLKHDQIGQVALQNLNIALVRGGDQAVVKEND DHKELLYFGGGSVSTVKRSRTRTRAMMTAISDKLKTVEKVFVVGHKNLDMDALGATVGMA HFASQIVRKSYAVYDDMAMNADIERAVERLKEDGQSPLITLSEAEELVNQHSLLIMVDHS KIHLTLSQDFYDRFNEVIVVDHHRRDDDFPENAVLTFIESGASSACELVTELLQFQGAPE RLSKIQASILMAGIMLDTKNFSTRVTSRTFDVASYLRGLGSDSGEIQTISATDFDEYRRI NELILAGERITDDIIVATGDNYKCYNNVVISKAADTMLAMAGIEATFVVARTSNSTVSIS SRSHNAINVQRIMEKLGGGGHFNLAACQLRDCSVSQAQNKLIETIMGELAPKGD >gi|311100322|gb|AEKO01000010.1| GENE 47 50575 - 50946 300 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149003067|ref|ZP_01827976.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP14-BS69] # 32 119 1 88 90 120 62 3e-26 MIKKNLAKEATNQAIGELKGKQKSEEKHAAELLAEARRVKEQLEKEENRLQFTEKVGPDG RTFGSITAKKIAEGLQKQFGIKIDKRHIELEHPIRAIGLIEVPVKLHKEVNAQIKINIKN SAE >gi|311100322|gb|AEKO01000010.1| GENE 48 50990 - 52351 1289 453 aa, chain + ## HITS:1 COG:SPy2182 KEGG:ns NR:ns ## COG: SPy2182 COG0305 # Protein_GI_number: 15675917 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Streptococcus pyogenes M1 GAS # 1 452 3 454 455 731 85.0 0 MSEAQELRVQPHDLVAEQSVLGAIFINPEKLITVREFIEADDFYKYSHRVIFKAMVTLSD RNDAIDATTVRTILDDQDDLQNIGGISYLVDLVNSVPTSANAEYYAKIVAEKAMLRHIIN RLTETVNQAYEGATESDEIIANAEKALVDVSEHSNRSGFRKISEVLDVNFNTLEMRSQQT SDVTGLPTGFRDLDKITTGLHPDQLIILAARPAVGKTAFVLNIAQNVGTKQNKSVAVFSL EMGAESLVDRMLAAEGMIDSHALRTGQLTEQDWNNVMIAQGALAEAPIYIDDTPGIKITE IRARSRKLSQEVEGGLGLIVIDYLQLITGTRPENRQQEVSDISRQLKILAKELKVPVIAL SQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDYYRKEGEEPENAIEDNTIEV ILEKNRAGARGTVKLLFQKEYNKFSSIAQFEES >gi|311100322|gb|AEKO01000010.1| GENE 49 52375 - 52677 423 100 aa, chain + ## HITS:1 COG:SPy2181 KEGG:ns NR:ns ## COG: SPy2181 COG4466 # Protein_GI_number: 15675916 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 89 1 89 90 132 84.0 2e-31 MSDAFADVAKMKNIKEAIKSHEGQLVELTLENGRKREKNKIGRLTEVYPSLFIVEYQDFS SQAGAINNSYVESYTYSDILTEKTLIRYLSPEEQAEIENK >gi|311100322|gb|AEKO01000010.1| GENE 50 52875 - 53486 1032 203 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478099|ref|ZP_04062710.1| ribosomal protein S4 [Streptococcus salivarius SK126] # 1 203 1 203 203 402 100 1e-111 MSRYTGPSWKQSRRLGFSLTGTGKELARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRFS YGLGEKQFRNLFVQATKVKGGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHGHI LVDGKRVDIPSYRVEVGQVISVREKSAKVPAILEAVEATIGRPAFVSFDAEKLEGSLTRL PERDEINPEINEALVVEFYNKML >gi|311100322|gb|AEKO01000010.1| GENE 51 53555 - 54811 503 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 481 62.0 1e-135 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLRLKKRRFQCKSCRRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGKLAFVAQNYETNELIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLAKKLFPNAKIVLDRFHIIQHL GRAFLKTRIATMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLGFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100322|gb|AEKO01000010.1| GENE 52 55077 - 55322 281 81 aa, chain - ## HITS:1 COG:no KEGG:STER_1972 NR:ns ## KEGG: STER_1972 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 20 74 1 55 55 79 85.0 4e-14 MYASYNLKCGKIKNEREVLMTKTEVIQRLQKDLGIPRFQAYIEDKDYSEEEYDQLKKDFE SYFTNYVSNVSADFEGGLDNK >gi|311100322|gb|AEKO01000010.1| GENE 53 55381 - 55743 468 120 aa, chain + ## HITS:1 COG:SP2061 KEGG:ns NR:ns ## COG: SP2061 COG3759 # Protein_GI_number: 15901881 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 4 117 1 115 119 110 62.0 9e-25 MSIITLILAGIVALEHLYIMYLETFATHSDTTSRVFNMSKEELQRDSVTNLFKNQGIYNG LIAVFLLYGIFTSSQLLVTVFVLNVFFAAIYGAITANKKIILTQGGPAILTLLSLIIPLF >gi|311100322|gb|AEKO01000010.1| GENE 54 55818 - 56357 507 179 aa, chain - ## HITS:1 COG:SPy2177 KEGG:ns NR:ns ## COG: SPy2177 COG1309 # Protein_GI_number: 15675913 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 6 177 4 174 177 189 61.0 3e-48 MTKDQRRSQTKKALLDALVICLKDQDFNDITTIRLVQTAGISRSSFYTHYKDKYEMIDSY QKELFHKLEYIFDKYEGKKEGAFLEIFEFLTREKLLSALLSTNGSKEIQDFLIHKLQRMI AEDFIDPTAEKRALKGFEKDYASIYFAHAIFGACQAWINKGKKESPQEMTDFLLRFIPQ >gi|311100322|gb|AEKO01000010.1| GENE 55 56485 - 58854 2148 789 aa, chain + ## HITS:1 COG:SPy2176 KEGG:ns NR:ns ## COG: SPy2176 COG1511 # Protein_GI_number: 15675912 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 785 1 754 757 585 47.0 1e-166 MLAELKALLKSPKLWITIIGVSLIPALYNLIFLSSMWDPYGNVKNLPVAVVNKDKSASFQ DKTLNIGHDMVDNMSKNKNLDYHFVTENEAQKGIEDGDYYMVITFPENLSSNAASLLTND PKKLEISYQTTAGHSFVSSKMSDSAMSKLKDTVSKNITSTYVGAVFKSMSQLQGGMGTAA NGASQLYAGAGALQSGSQTLSNGLGTLAGSTQTLATGVDTLSSGASAYTSGVSTLSGALS QLNANSEAVNSAAGQFVSGAEAMNTLVTGADSLSTALSQMATATSLSEEQQAQLSTLSTN LTDLNTAIQNLNIAVSNTSLPSGTSTTSVDTSSIATYLSNISSAASSIATASATDKANDL AAVQGTAAYQSLTADQQAEITSAISNAGSTASSYASTIASDVSSMSTALSSLTGTTTTSS GDSSSLASLQTSISGIASSANALLPVASSTVSSMQANIANVNSVLVNQLSPGAIQVASGV STAQSTLATGASALSTGLSTYTGAVSTIASGAQTLDANSSSLMTGFSTLQSGTSALNTGA QQLATGGNTLTNGLTSLSTNLSTLSNSLNKANQQLSLVSVNSDNAKMVSAPLKEKKTDKD KVDTNGVGMAPYMISVSLMVVALSTNVIFAKSLTGRKFTSRFDWAKNKLLINGIITTMAA IALYIAIRFVGVEPNHPLATFGMILLVAWTLMALVTALVGWDDRYGAFASMILLLLQLGA SAGTYPIELSPKFFKIIQPFLPMSYSVSGLRQTISMTGQISDQVRMLFIFLLIFVVVGII IYRPKYENE >gi|311100322|gb|AEKO01000010.1| GENE 56 58892 - 59737 817 281 aa, chain - ## HITS:1 COG:no KEGG:str1992 NR:ns ## KEGG: str1992 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 281 10 291 291 370 81.0 1e-101 MKTWKKIVLGVSLTSLFLGGGLVAWGYSQGGLIDLQNQTKSEQDYVKKEVDDFSKIDIKS SSYNVLIKNGDVDKATLSYYQKTKNPIDTSVKDGQLTINDNNSELDSTSNKHINFFGLKD LVRLSTLNEEVRNKTIVITLPKKQTIDFLKVDLATGNLDLSNSTIKQADINLNVGDLTFT KMIVSQLKANLDVGSVDSDNTLFTNSDLSIAMGDYSGDNLIFNGHNKLDVTTGDIEIALK DYMLNVQADSHSGEVDITNNLKISKDNTLTITSDLGDITVE >gi|311100322|gb|AEKO01000010.1| GENE 57 59734 - 60318 489 194 aa, chain - ## HITS:1 COG:SPy2173 KEGG:ns NR:ns ## COG: SPy2173 COG4709 # Protein_GI_number: 15675910 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 190 1 190 195 147 44.0 9e-36 MTRTEYIAKLTKYLRKLPQKDYEEALEYFMEYFEEAGPENEAQVIAELGTPKEAAYEVIS RLLDEKIVEDKSSLRNKTTILWIAILAVLASPVALPILLFFLAMLLTLLLIIFAVIVTAL ALTFALLISGVYTFFTSFSLLNVSLASTLFGIGLGLLMFGGALLLLLISFEICKLIVKLI TLLIKWLIKKGRKS >gi|311100322|gb|AEKO01000010.1| GENE 58 60305 - 60631 262 108 aa, chain - ## HITS:1 COG:SPy2172 KEGG:ns NR:ns ## COG: SPy2172 COG1695 # Protein_GI_number: 15675909 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 108 1 108 108 155 74.0 1e-38 MYFPTSSILIEFLILAIIDREDSYGYDISQTIKLASNIKESTLYPILKKLEKAGYMTTYS QAYQGRKRKYYSITQEGKNQLQFLNEEWLTYKETLDGIVEGRLRHDKD >gi|311100322|gb|AEKO01000010.1| GENE 59 60793 - 61401 371 202 aa, chain + ## HITS:1 COG:SPy2170 KEGG:ns NR:ns ## COG: SPy2170 COG0494 # Protein_GI_number: 15675908 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 3 198 1 194 213 225 55.0 4e-59 MTIKDKLAHYEPKPLGEKRRYAVLLPLIYDVKTDKYQILYQVRSEHISQPGEVSFPGGRV EDGETFQEAAIRETCEELNLIPDQIDIWGEIDYLIHQGRTIHCFVGKINIENWEHIHPNE EVKRLFTVCVDTLLTEGPIYYKVTSTLSDAKGFPFFLVKNRERYNFGYSERHIPFYRNLT ENIWGMTAMFTHRFTDILKGLE >gi|311100322|gb|AEKO01000010.1| GENE 60 61879 - 63144 842 421 aa, chain - ## HITS:1 COG:L48477 KEGG:ns NR:ns ## COG: L48477 COG0582 # Protein_GI_number: 15672029 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 13 410 3 386 394 191 32.0 3e-48 MKKEIIIHNNRKVTKTIKNNGTISYTQRGVYIGVDVKTGKKVTSSVTAKTLRGLDRKIIQ TRLDFENRGSTFKETLVINNFEELAEAWFISFITWVTSQNTINRVRGYLDTYIIPKFGDY KPDEIKSVDIQIWVNQLAQKSKKSVEAGNKKSKKGHAKDFGAVIHKLSDIFDFGITNFEL PHNPARTIKIPPKPKPSQKRIMVLHEEDLSKWLNFLNSLPNTRANRRFKLICNTLLASAL RINELLALTIHDIDFKANEILVNKTLMWKAGNKKLGIKGKMVCKNSAKTDSGNRRVAVPR KILEDLKSFHDEMNSYFERHGLPTVDLIFPTIYGNYMCDRNERATLKKRLTELDLPDYGF HLFRHTHASLMLNAGANWKELQVRMGHKSIRTTMDIYVSLTNKNMHNAVDIYLKEIDKLT N >gi|311100322|gb|AEKO01000010.1| GENE 61 63232 - 63483 235 83 aa, chain - ## HITS:1 COG:no KEGG:GALLO_2221 NR:ns ## KEGG: GALLO_2221 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 4 83 5 85 85 85 60.0 4e-16 MIDEIRKLNAIENLLTALSIAIQQQNKVPLGIITQKNLLKELNISPGTLKSWENKGLKRL EPPIDGTRTVFYKLEDIISFLTP >gi|311100322|gb|AEKO01000010.1| GENE 62 63546 - 64883 651 445 aa, chain - ## HITS:1 COG:no KEGG:LACR_2580 NR:ns ## KEGG: LACR_2580 # Name: not_defined # Def: plasmid replication protein Rep and AAA-class ATPase domain # Organism: L.lactis_SK11 # Pathway: not_defined # 2 444 22 461 496 322 41.0 2e-86 MEFWNDYSDTAIQKAINGEPMILLEEMVTRLETITSVSDAYIIIHDKDTKKVWVPEKKTY IENLKSLHVHFLFKFSKGATFAELVDVLGIESQFIEKPKSGRYSYDNKLSYLIHAKDGDK FLYSPSEVHTLVGEDFQNIYNVRRISWEQGRAKKTSSRAGSNIEKLIIDITSGKIKKKDV LHDPNLFEIYIFNKSKVNEAFDIYSEYKAMKTLEDIENGLFTKSTIFIKGASGLGKTTFA KKIAKELKKLAIANGEYWDSVITAATNPFDEVQSQELLILDDVRGNATTASDWLKLTDKY NISALSARFKNKGGTVKTIIITSPHHPLQFFFESKNGFREDPSQFIRRINHLVVIDKGSS GESTYKVAMPERKQNPVIRQIPNHENKIALDYDFSRAEEMKHEDLLTFIVETIRLNNQWN ISYEEYKKTITENSTDQSENGDSQT >gi|311100322|gb|AEKO01000010.1| GENE 63 65070 - 65348 147 92 aa, chain - ## HITS:1 COG:no KEGG:Sez_0301 NR:ns ## KEGG: Sez_0301 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 5 90 8 95 97 102 61.0 5e-21 MSKTQTEFITVTGISLKEEKEKGWISCVKTNSSSWKLLLLPFSKENFASTFTKLGIYQVQ LSDNAGFGERPKYEITEAKMIVSFEDILKSSQ >gi|311100322|gb|AEKO01000010.1| GENE 64 65828 - 66346 380 172 aa, chain - ## HITS:1 COG:no KEGG:Sez_0302 NR:ns ## KEGG: Sez_0302 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 24 172 2 147 147 113 47.0 3e-24 MRIHVSTTSVPKQFQNKIVIFDSNETLKSKGGIEIKKDKKYSVVGYSSDNHAPLFLGVIV NEQKNTLYVETIESQTELFLEEYLTLKNDLESQIKSLQSELEQLEQDELYREYKIEDLAI KIDDLKEEIEEQEELLTNKKKLIDTERRKNFKRWINRHVLLKFLFWLYRKTS >gi|311100322|gb|AEKO01000010.1| GENE 65 66712 - 67542 241 276 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSMLPVSLEYSRSSILKSIHVMSDNRIAMLSHFKNDSFYVLSDTPLDLDNDFPGLNVGD LKDSQGNFQYRVYPYQFWRPDILKLLKKNGANMREIYSLKDLIEFRREQELSWTRESTEL NQIKKVPKYPAPEIYGKLVEEELRDSLDFTYALTKKEEEIFEGGGRPPLRFNISFLANLV KYLRDKYDSNITRNKVWYKNDNITFLLRRELVDDLSDSLHGNLPEFPSSAEKPVRTLMRA INKEDITVIADNINSYNEHELEKKLERLLISWPQKY >gi|311100322|gb|AEKO01000010.1| GENE 66 67734 - 67952 78 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVVSNIFNIQKERKISKLVTFCQEMRGDSYKKKQIERAIYKSLDDYKRILINKYITLEAN GKYLVDLSFWVK Prediction of potential genes in microbial genomes Time: Sun May 29 18:57:16 2011 Seq name: gi|311100154|gb|AEKO01000011.1| Streptococcus vestibularis F0396 ctg1126932565720, whole genome shotgun sequence Length of sequence - 188992 bp Number of predicted genes - 173, with homology - 167 Number of transcription units - 83, operones - 38 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 2817 99.0 # X68429 [D:1..2900] # 23S ribosomal RNA # Streptococcus thermophilus # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + 5S_RRNA 2834 - 3082 88.0 # AF302131 [D:490..741] # 5S ribosomal RNA # Streptococcus agalactiae # Bacteria; Firmicutes; Lactobacillales; Streptococcaceae; Streptococcus. + TRNA 3022 - 3094 84.8 # Val TAC 0 0 + TRNA 3097 - 3169 72.6 # Asp GTC 0 0 + TRNA 3189 - 3261 82.2 # Lys TTT 0 0 + TRNA 3267 - 3348 69.0 # Leu TAG 0 0 + TRNA 3362 - 3434 83.5 # Thr TGT 0 0 + TRNA 3442 - 3513 64.7 # Glu TTC 0 0 1 1 Tu 1 . + CDS 3602 - 4534 1161 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase + Prom 4541 - 4600 6.0 2 2 Tu 1 . + CDS 4637 - 5248 320 ## str0373 hypothetical protein 3 3 Op 1 2/0.118 - CDS 5278 - 5811 580 ## COG3557 Uncharacterized domain/protein associated with RNAses G and E 4 3 Op 2 . - CDS 5882 - 6559 544 ## COG2137 Uncharacterized protein conserved in bacteria - Prom 6658 - 6717 9.7 + Prom 6537 - 6596 6.3 5 4 Tu 1 . + CDS 6692 - 8047 937 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Term 8070 - 8109 2.4 + Prom 8074 - 8133 10.6 6 5 Tu 1 . + CDS 8157 - 9149 1171 ## COG2502 Asparagine synthetase A + Term 9153 - 9188 2.8 - Term 9259 - 9292 1.4 7 6 Tu 1 . - CDS 9301 - 10659 1482 ## COG0527 Aspartokinases - Prom 10685 - 10744 9.4 + Prom 10631 - 10690 4.3 8 7 Tu 1 . + CDS 10790 - 11428 543 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 11436 - 11469 1.3 + Prom 11469 - 11528 6.2 9 8 Op 1 5/0.000 + CDS 11641 - 12432 815 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Prom 12450 - 12509 8.2 10 8 Op 2 4/0.000 + CDS 12647 - 12970 291 ## COG1846 Transcriptional regulators 11 8 Op 3 6/0.000 + CDS 12970 - 13932 890 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III + Term 13933 - 13980 -0.4 12 8 Op 4 4/0.000 + CDS 13996 - 14220 401 ## COG0236 Acyl carrier protein + Term 14231 - 14271 6.0 + Prom 14237 - 14296 4.7 13 9 Op 1 3/0.000 + CDS 14326 - 15291 1268 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 14 9 Op 2 26/0.000 + CDS 15365 - 16234 1005 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 15 9 Op 3 11/0.000 + CDS 16247 - 16981 250 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 16 9 Op 4 4/0.000 + CDS 17043 - 18275 1673 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 17 9 Op 5 4/0.000 + CDS 18279 - 18773 597 ## COG0511 Biotin carboxyl carrier protein 18 9 Op 6 4/0.000 + CDS 18770 - 19195 506 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Term 19204 - 19251 5.8 19 9 Op 7 4/0.000 + CDS 19315 - 20685 1426 ## COG0439 Biotin carboxylase 20 9 Op 8 10/0.000 + CDS 20691 - 21557 1027 ## COG0777 Acetyl-CoA carboxylase beta subunit 21 9 Op 9 . + CDS 21554 - 22324 966 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 22328 - 22362 2.0 - Term 22316 - 22349 3.4 22 10 Tu 1 . - CDS 22354 - 22836 605 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis - Prom 22858 - 22917 6.7 - Term 22924 - 22961 2.4 23 11 Tu 1 . - CDS 23013 - 24179 836 ## COG0582 Integrase - Prom 24306 - 24365 8.6 24 12 Tu 1 . - CDS 24368 - 25504 614 ## COG3177 Uncharacterized conserved protein - Prom 25677 - 25736 7.5 25 13 Tu 1 . - CDS 26001 - 26822 544 ## str1386 hypothetical protein - Prom 26856 - 26915 4.5 26 14 Tu 1 . - CDS 26944 - 27507 339 ## COG1396 Predicted transcriptional regulators + Prom 27539 - 27598 10.6 27 15 Op 1 1/0.176 + CDS 27631 - 27834 137 ## COG1476 Predicted transcriptional regulators 28 15 Op 2 . + CDS 27894 - 28517 254 ## COG3646 Uncharacterized phage-encoded protein 29 15 Op 3 . + CDS 28541 - 28726 258 ## gi|148988903|ref|ZP_01820318.1| hypothetical protein CGSSp6BS73_07493 + Prom 29113 - 29172 3.5 30 16 Op 1 . + CDS 29201 - 29647 346 ## smi_2012 hypothetical protein 31 16 Op 2 . + CDS 29644 - 29844 263 ## SPH_0295 hypothetical protein 32 16 Op 3 . + CDS 29846 - 30043 233 ## 33 16 Op 4 . + CDS 30055 - 30291 254 ## str0779 unknown protein, phage associated 34 16 Op 5 . + CDS 30288 - 30638 370 ## M6_Spy1814 unknown phage protein 35 16 Op 6 . + CDS 30631 - 30903 198 ## SPH_0298 phage protein 36 16 Op 7 . + CDS 30920 - 31786 353 ## SPH_0299 phage protein 37 16 Op 8 . + CDS 31846 - 33306 665 ## COG3378 Predicted ATPase + Prom 33441 - 33500 8.3 38 17 Op 1 . + CDS 33640 - 33978 113 ## HMPREF0837_10286 hypothetical protein 39 17 Op 2 . + CDS 33872 - 34081 149 ## + Term 34088 - 34114 -1.0 40 17 Op 3 . + CDS 34152 - 34652 119 ## SPH_0303 hypothetical protein + Prom 34682 - 34741 2.5 41 18 Tu 1 . + CDS 34770 - 35162 129 ## smi_2000 transcriptional regulator + Term 35247 - 35282 3.4 - Term 35331 - 35359 -0.9 42 19 Tu 1 . - CDS 35446 - 36396 282 ## COG4823 Abortive infection bacteriophage resistance protein - Prom 36490 - 36549 10.6 43 20 Tu 1 . + CDS 36989 - 38596 2244 ## COG1418 Predicted HD superfamily hydrolase + Term 38599 - 38635 3.0 + Prom 38661 - 38720 10.5 44 21 Op 1 10/0.000 + CDS 38809 - 39555 809 ## COG1349 Transcriptional regulators of sugar metabolism 45 21 Op 2 19/0.000 + CDS 39552 - 40463 978 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 46 21 Op 3 . + CDS 40460 - 42436 2761 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 42449 - 42482 3.1 + Prom 42468 - 42527 4.5 47 22 Tu 1 . + CDS 42584 - 43936 467 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 43978 - 44020 2.1 48 23 Op 1 . - CDS 44048 - 45295 980 ## COG0285 Folylpolyglutamate synthase 49 23 Op 2 . - CDS 45341 - 45802 526 ## str0410 hypothetical protein - Prom 45870 - 45929 9.3 + Prom 45829 - 45888 9.8 50 24 Op 1 7/0.000 + CDS 45911 - 47056 1281 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 51 24 Op 2 . + CDS 47110 - 48333 1446 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase 52 25 Op 1 4/0.000 + CDS 48439 - 49950 1603 ## COG0438 Glycosyltransferase 53 25 Op 2 . + CDS 49943 - 51262 1160 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 54 25 Op 3 . + CDS 51267 - 51803 311 ## str0415 hypothetical protein + Prom 51843 - 51902 7.2 55 26 Op 1 32/0.000 + CDS 52031 - 52345 523 ## PROTEIN SUPPORTED gi|116627316|ref|YP_819935.1| 50S ribosomal protein L21 56 26 Op 2 5/0.000 + CDS 52381 - 52671 491 ## PROTEIN SUPPORTED gi|55820505|ref|YP_138947.1| 50S ribosomal protein L27 + Term 52682 - 52714 1.1 57 26 Op 3 . + CDS 52728 - 53423 1197 ## PROTEIN SUPPORTED gi|116627318|ref|YP_819937.1| acetyltransferase + Term 53436 - 53472 2.4 + Prom 53538 - 53597 7.6 58 27 Op 1 3/0.000 + CDS 53624 - 53998 502 ## COG4835 Uncharacterized protein conserved in bacteria 59 27 Op 2 1/0.176 + CDS 54000 - 54842 674 ## COG1307 Uncharacterized protein conserved in bacteria 60 27 Op 3 1/0.176 + CDS 54903 - 55670 1153 ## COG0289 Dihydrodipicolinate reductase 61 27 Op 4 4/0.000 + CDS 55667 - 56869 1144 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase + Term 56895 - 56942 3.0 62 27 Op 5 3/0.000 + CDS 56953 - 58626 1670 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 63 27 Op 6 . + CDS 58623 - 58832 376 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 58851 - 58900 1.2 - Term 58839 - 58885 3.4 64 28 Op 1 . - CDS 58914 - 59417 466 ## stu0427 hypothetical protein 65 28 Op 2 . - CDS 59486 - 60247 502 ## COG1051 ADP-ribose pyrophosphatase 66 28 Op 3 . - CDS 60311 - 61417 1055 ## COG1056 Nicotinamide mononucleotide adenylyltransferase 67 29 Tu 1 . + CDS 61763 - 63115 1577 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 63150 - 63193 7.1 + Prom 63164 - 63223 6.9 68 30 Tu 1 . + CDS 63253 - 63663 425 ## COG0242 N-formylmethionyl-tRNA deformylase + Term 63722 - 63771 6.2 + Prom 63763 - 63822 5.1 69 31 Op 1 4/0.000 + CDS 63851 - 64294 329 ## COG1846 Transcriptional regulators 70 31 Op 2 35/0.000 + CDS 64298 - 66112 205 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 71 31 Op 3 . + CDS 66102 - 67880 180 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 67917 - 67963 6.5 72 32 Tu 1 . + CDS 68232 - 68396 75 ## STER_0472 hypothetical protein + Term 68456 - 68494 -0.7 + Prom 68547 - 68606 5.9 73 33 Op 1 1/0.176 + CDS 68630 - 69253 545 ## COG2357 Uncharacterized protein conserved in bacteria 74 33 Op 2 40/0.000 + CDS 69255 - 69932 645 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 75 33 Op 3 . + CDS 69945 - 71168 697 ## COG0642 Signal transduction histidine kinase + Prom 71170 - 71229 7.8 76 34 Op 1 33/0.000 + CDS 71386 - 72123 1113 ## COG0528 Uridylate kinase 77 34 Op 2 2/0.118 + CDS 72138 - 72695 866 ## COG0233 Ribosome recycling factor 78 34 Op 3 1/0.176 + CDS 72786 - 73643 984 ## COG2996 Uncharacterized protein conserved in bacteria 79 34 Op 4 . + CDS 73652 - 73867 265 ## COG4479 Uncharacterized protein conserved in bacteria + Term 73893 - 73939 1.1 + Prom 73877 - 73936 5.4 80 35 Op 1 . + CDS 74105 - 75352 1687 ## stu0442 glucan-binding protein B, putative + Term 75371 - 75395 -1.0 81 35 Op 2 . + CDS 75432 - 76490 1141 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase + Term 76497 - 76547 -0.3 + Prom 76529 - 76588 5.0 82 36 Op 1 . + CDS 76768 - 77016 117 ## gi|228477914|ref|ZP_04062528.1| conserved hypothetical protein 83 36 Op 2 . + CDS 77010 - 77192 177 ## gi|228477914|ref|ZP_04062528.1| conserved hypothetical protein + Prom 77255 - 77314 8.9 84 37 Op 1 . + CDS 77379 - 78419 847 ## stu0448 hypothetical protein 85 37 Op 2 . + CDS 78328 - 78690 207 ## gi|228477892|ref|ZP_04062506.1| conserved hypothetical protein 86 37 Op 3 . + CDS 78715 - 78954 120 ## STER_0484 hypothetical protein + Prom 78956 - 79015 9.4 87 38 Tu 1 . + CDS 79063 - 81066 2270 ## COG0143 Methionyl-tRNA synthetase + Term 81220 - 81249 1.4 - Term 81208 - 81237 1.4 88 39 Tu 1 . - CDS 81345 - 82241 686 ## COG0583 Transcriptional regulator - Prom 82270 - 82329 8.4 + Prom 83451 - 83510 8.3 89 40 Op 1 7/0.000 + CDS 83551 - 84510 505 ## COG4469 Competence protein 90 40 Op 2 1/0.176 + CDS 84521 - 86326 2041 ## COG1164 Oligoendopeptidase F + Term 86348 - 86388 4.3 + Prom 86427 - 86486 5.7 91 41 Op 1 2/0.118 + CDS 86595 - 87776 1056 ## COG0477 Permeases of the major facilitator superfamily + Term 87788 - 87830 6.1 92 41 Op 2 3/0.000 + CDS 87834 - 88541 834 ## COG4122 Predicted O-methyltransferase 93 41 Op 3 3/0.000 + CDS 88603 - 89745 1502 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 89968 - 90038 6.4 94 41 Op 4 . + CDS 90087 - 92705 3553 ## COG0013 Alanyl-tRNA synthetase + Term 92735 - 92766 1.1 + Prom 92767 - 92826 10.4 95 42 Tu 1 . + CDS 92880 - 95462 2532 ## COG3942 Surface antigen + Term 95468 - 95514 6.8 + Prom 95609 - 95668 7.8 96 43 Tu 1 . + CDS 95696 - 96349 505 ## gi|228477879|ref|ZP_04062493.1| hypothetical protein STRSA0001_0590 + Term 96353 - 96400 5.1 + Prom 96526 - 96585 7.9 97 44 Tu 1 . + CDS 96617 - 100417 4883 ## COG1876 D-alanyl-D-alanine carboxypeptidase + Term 100433 - 100465 4.0 98 45 Op 1 2/0.118 - CDS 100496 - 101125 307 ## COG3464 Transposase and inactivated derivatives 99 45 Op 2 . - CDS 101167 - 101751 223 ## COG3464 Transposase and inactivated derivatives 100 46 Op 1 1/0.176 + CDS 102041 - 102751 704 ## COG0388 Predicted amidohydrolase 101 46 Op 2 . + CDS 102761 - 103942 1144 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 103952 - 104001 5.3 + Prom 103986 - 104045 11.1 102 47 Op 1 11/0.000 + CDS 104071 - 105093 1141 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 103 47 Op 2 10/0.000 + CDS 105122 - 106315 1330 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 104 47 Op 3 13/0.000 + CDS 106342 - 107079 729 ## COG0548 Acetylglutamate kinase 105 47 Op 4 . + CDS 107083 - 108213 1041 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 108224 - 108259 4.1 - Term 108208 - 108250 5.7 106 48 Tu 1 . - CDS 108253 - 109131 1001 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 109155 - 109214 8.3 + Prom 109219 - 109278 4.9 107 49 Op 1 . + CDS 109306 - 109545 218 ## COG0460 Homoserine dehydrogenase 108 49 Op 2 13/0.000 + CDS 109545 - 110591 1331 ## COG0460 Homoserine dehydrogenase + Term 110632 - 110671 3.0 109 49 Op 3 . + CDS 110675 - 111535 1033 ## COG0083 Homoserine kinase 110 49 Op 4 . + CDS 111528 - 112412 628 ## COG2962 Predicted permeases + Prom 112440 - 112499 5.2 111 50 Tu 1 . + CDS 112525 - 113142 801 ## STER_0509 hypothetical protein + Prom 113163 - 113222 6.5 112 51 Tu 1 . + CDS 113276 - 113479 295 ## STER_0510 hypothetical protein + Term 113488 - 113517 0.5 113 52 Tu 1 . - CDS 113664 - 113924 92 ## - Prom 114082 - 114141 3.8 114 53 Op 1 1/0.176 + CDS 113923 - 114510 574 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 115 53 Op 2 . + CDS 114488 - 115057 870 ## PROTEIN SUPPORTED gi|125718620|ref|YP_001035753.1| ribosomal protein N-acetylase 116 53 Op 3 . + CDS 115087 - 117738 3068 ## COG0525 Valyl-tRNA synthetase + Term 117746 - 117778 3.1 117 54 Op 1 . + CDS 117817 - 119634 560 ## Dred_0879 hypothetical protein 118 54 Op 2 . + CDS 119627 - 119956 108 ## lmo1119 hypothetical protein 119 54 Op 3 . + CDS 120049 - 120477 173 ## lmo1119 hypothetical protein + Term 120527 - 120570 1.5 + Prom 121176 - 121235 8.2 120 55 Op 1 40/0.000 + CDS 121265 - 121462 338 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 121 55 Op 2 2/0.118 + CDS 121497 - 122204 530 ## COG0356 F0F1-type ATP synthase, subunit a 122 55 Op 3 38/0.000 + CDS 122225 - 122722 760 ## COG0711 F0F1-type ATP synthase, subunit b 123 55 Op 4 41/0.000 + CDS 122722 - 123258 476 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 124 55 Op 5 42/0.000 + CDS 123274 - 124779 1770 ## COG0056 F0F1-type ATP synthase, alpha subunit 125 55 Op 6 42/0.000 + CDS 124798 - 125676 1082 ## COG0224 F0F1-type ATP synthase, gamma subunit 126 55 Op 7 42/0.000 + CDS 125753 - 127159 1910 ## COG0055 F0F1-type ATP synthase, beta subunit 127 55 Op 8 . + CDS 127172 - 127588 471 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 127591 - 127632 6.5 128 56 Tu 1 . + CDS 128075 - 129124 768 ## COG0772 Bacterial cell division membrane protein + Term 129133 - 129175 0.3 + Prom 129232 - 129291 8.9 129 57 Tu 1 . + CDS 129356 - 130552 1398 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 130600 - 130631 0.1 - Term 130551 - 130601 0.3 130 58 Tu 1 . - CDS 130674 - 131930 542 ## COG3464 Transposase and inactivated derivatives - Prom 131957 - 132016 6.2 + Prom 132135 - 132194 8.9 131 59 Tu 1 . + CDS 132223 - 132981 960 ## COG0149 Triosephosphate isomerase + Term 132986 - 133030 3.9 132 60 Tu 1 . - CDS 132849 - 133112 104 ## - Prom 133191 - 133250 8.4 + Prom 133135 - 133194 10.1 133 61 Op 1 22/0.000 + CDS 133218 - 133847 711 ## COG0125 Thymidylate kinase 134 61 Op 2 7/0.000 + CDS 133856 - 134731 494 ## COG0470 ATPase involved in DNA replication 135 61 Op 3 5/0.000 + CDS 134728 - 135534 665 ## COG1774 Uncharacterized homolog of PSP1 136 61 Op 4 2/0.118 + CDS 135521 - 135841 263 ## COG4467 Uncharacterized protein conserved in bacteria 137 61 Op 5 . + CDS 135844 - 136710 790 ## COG0313 Predicted methyltransferases + Prom 136757 - 136816 7.3 138 62 Op 1 24/0.000 + CDS 136847 - 138082 1355 ## COG0004 Ammonia permease 139 62 Op 2 . + CDS 138093 - 138434 568 ## COG0347 Nitrogen regulatory protein PII + Term 138440 - 138481 5.6 + Prom 138456 - 138515 4.5 140 63 Op 1 . + CDS 138638 - 139180 447 ## COG1705 Muramidase (flagellum-specific) 141 63 Op 2 . + CDS 139203 - 140024 726 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 140025 - 140076 4.4 142 64 Tu 1 . - CDS 140042 - 140551 432 ## SmuNN2025_1532 hypothetical protein + Prom 140839 - 140898 5.2 143 65 Op 1 1/0.176 + CDS 141013 - 142569 2116 ## COG1283 Na+/phosphate symporter + Term 142574 - 142612 6.3 144 65 Op 2 . + CDS 142639 - 143802 1308 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Term 143806 - 143854 5.9 + Prom 143825 - 143884 9.1 145 66 Tu 1 . + CDS 143908 - 145152 1007 ## COG3949 Uncharacterized membrane protein + Prom 145260 - 145319 2.4 146 67 Op 1 . + CDS 145425 - 145796 251 ## COG3791 Uncharacterized conserved protein 147 67 Op 2 . + CDS 145832 - 146749 1074 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 148 68 Tu 1 . - CDS 146774 - 146956 100 ## - Prom 147156 - 147215 3.0 + Prom 146874 - 146933 2.3 149 69 Op 1 3/0.000 + CDS 146955 - 148991 2419 ## COG0751 Glycyl-tRNA synthetase, beta subunit 150 69 Op 2 . + CDS 149062 - 149259 153 ## COG4224 Uncharacterized protein conserved in bacteria + Term 149270 - 149310 9.9 + Prom 149311 - 149370 7.1 151 70 Tu 1 . + CDS 149427 - 150818 1301 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 150829 - 150856 -0.8 - Term 150854 - 150880 0.3 152 71 Tu 1 . - CDS 150891 - 151526 542 ## STER_0543 hypothetical protein - Prom 151588 - 151647 8.6 + Prom 151611 - 151670 7.6 153 72 Tu 1 . + CDS 151835 - 153736 2083 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific + Term 153740 - 153780 1.4 154 73 Tu 1 . - CDS 153766 - 154524 892 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 154547 - 154606 4.4 155 74 Tu 1 . + CDS 154813 - 156069 1282 ## STER_0550 hypothetical protein + Term 156075 - 156112 3.1 156 75 Tu 1 . + CDS 156552 - 156680 109 ## + Term 156698 - 156755 12.1 + Prom 156811 - 156870 5.2 157 76 Tu 1 . + CDS 156891 - 158120 1289 ## STER_0551 hypothetical protein + Term 158142 - 158171 2.1 + Prom 158146 - 158205 5.6 158 77 Op 1 2/0.118 + CDS 158235 - 159140 991 ## COG0583 Transcriptional regulator 159 77 Op 2 15/0.000 + CDS 159149 - 159610 355 ## COG0597 Lipoprotein signal peptidase 160 77 Op 3 4/0.000 + CDS 159594 - 160484 1127 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 160496 - 160538 5.2 + Prom 160509 - 160568 7.7 161 78 Op 1 7/0.000 + CDS 160702 - 161223 833 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase + Term 161433 - 161467 -0.6 + Prom 161485 - 161544 6.2 162 78 Op 2 6/0.000 + CDS 161642 - 162919 1005 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 163 78 Op 3 4/0.000 + CDS 162943 - 163869 1109 ## COG0540 Aspartate carbamoyltransferase, catalytic chain + Prom 163920 - 163979 2.7 164 78 Op 4 24/0.000 + CDS 164033 - 165121 1053 ## COG0505 Carbamoylphosphate synthase small subunit 165 78 Op 5 . + CDS 165352 - 168531 3932 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 168542 - 168576 3.5 + Prom 168547 - 168606 4.7 166 79 Tu 1 . + CDS 168650 - 169405 507 ## COG0500 SAM-dependent methyltransferases + Prom 169499 - 169558 3.8 167 80 Op 1 24/0.000 + CDS 169667 - 170692 927 ## COG0845 Membrane-fusion protein 168 80 Op 2 36/0.000 + CDS 170703 - 171389 335 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 169 80 Op 3 . + CDS 171399 - 172607 369 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 + Term 172612 - 172655 7.8 + Prom 172805 - 172864 5.8 170 81 Op 1 47/0.000 + CDS 172900 - 173403 775 ## PROTEIN SUPPORTED gi|228478274|ref|ZP_04062882.1| 50S ribosomal protein L10 171 81 Op 2 . + CDS 173462 - 173845 580 ## PROTEIN SUPPORTED gi|81559695|sp|Q5M0W4|RL7_STRT1 RecName: Full=50S ribosomal protein L7/L12 gi|81560865|sp|Q5M5F1|RL7_STRT2 RecName: Full=50S ribosomal protein L7/L12 gi|55736602|gb|AAV60244.1| 50S ribosomal protein L7/L12 + Term 173876 - 173911 4.2 + Prom 174457 - 174516 10.2 172 82 Tu 1 . + CDS 174637 - 181530 7754 ## SGO_1148 surface-associated protein CshB + Term 181565 - 181600 1.1 + Prom 181680 - 181739 10.5 173 83 Tu 1 . + CDS 181922 - 188740 8170 ## SGO_1148 surface-associated protein CshB + Term 188790 - 188825 5.3 Predicted protein(s) >gi|311100154|gb|AEKO01000011.1| GENE 1 3602 - 4534 1161 310 aa, chain + ## HITS:1 COG:SP1534 KEGG:ns NR:ns ## COG: SP1534 COG1227 # Protein_GI_number: 15901378 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Streptococcus pneumoniae TIGR4 # 1 310 1 311 311 456 81.0 1e-128 MSKVFVFGHQNPDSDAIGSSYGYAYLKRQLGVDAEAVALGTPNEETAFVLEYFSVDAPRV VESAQSEGVNQVILTDHNEFQQSISDIKEVEVIEVVDHHRVANFETANPLMMRLEPVGSA SSIVYRMFKENNVEVPKDVAGLLLSGLISDTLLLKSPTTHASDPAVAAELAEIAGVNLEE YGLAMLKAGTNLSSKSAEELIDIDAKTFELNGNKVRVAQVNTVDIADVLSRQEEIEEAIT DSIKSNGYSDFVLMITDILNSNSEILTLGSNTDKVENAFDFVLENNHAFLEGAVSRKKQV VPQLTESFNA >gi|311100154|gb|AEKO01000011.1| GENE 2 4637 - 5248 320 203 aa, chain + ## HITS:1 COG:no KEGG:str0373 NR:ns ## KEGG: str0373 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 203 17 219 219 320 89.0 1e-86 MEIVNYLYLNQPVTLREIKRQFPFQKNIDKLIEEFVKAGYIERFEKRYRLLISLVSDSSK IDLDQHFFIESDSPSYQELLERRFVTEISNSTNKVVIIEQTSITRDDLTISNYFYKLRKN LSLTEEQNRLYNLLGDLNPEYFLKHVTTFLLKFIRKEYALQKRRNIFVDALELLGYLVQV EDGSYILNMDLDSEALVFCAKKD >gi|311100154|gb|AEKO01000011.1| GENE 3 5278 - 5811 580 177 aa, chain - ## HITS:1 COG:SPy1608 KEGG:ns NR:ns ## COG: SPy1608 COG3557 # Protein_GI_number: 15675490 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Uncharacterized domain/protein associated with RNAses G and E # Organism: Streptococcus pyogenes M1 GAS # 1 177 1 177 177 316 89.0 1e-86 MKLPKEGDFITIQSYKHDGSLHRTWRDTMVLKTTENAVIGVNDHTLVTEADGRRWVTREP AIVYFHKKYWFNIIAMIRDNGISYYCNLASPYVLDQEALKYIDYDLDVKVFADGEKKLLD VDEYETHKKEMHYSPDIDYILKEHVKILVDWINNGKGPFSQSYVNIWYKRYLELKNR >gi|311100154|gb|AEKO01000011.1| GENE 4 5882 - 6559 544 225 aa, chain - ## HITS:1 COG:SP1902 KEGG:ns NR:ns ## COG: SP1902 COG2137 # Protein_GI_number: 15901729 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 225 34 258 258 232 58.0 5e-61 MLTKEKTLSKNQLEDIKNFAQFSHGKNLALYFISFKQRTEKEVRDYLFKHEINPHIIPQI IDNLKKDHWIDDYKLLESLAQQNLNSGDKGAYVLKQKWLQKGCEKQVIDEVLTQFDFSEV AIKVASKLLRKYQGKLPTKSLKDKLTQNLINKGFAFQESKQAIDQLELEADEENEQTLLY KEIEKQYQKFSKKYDGYELKQRLTQSLARKGYDFDAIASALREYL >gi|311100154|gb|AEKO01000011.1| GENE 5 6692 - 8047 937 451 aa, chain + ## HITS:1 COG:SPy1606 KEGG:ns NR:ns ## COG: SPy1606 COG2265 # Protein_GI_number: 15675488 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 451 1 451 451 704 73.0 0 MNLQVKQRIPLKIKRMGINGEGIGFYKKTLVFVPGALKGEEVFCQIVSVKRNFVLAKLLK INKASKFRVEPECGVYEECGGCQLMHLRYDKQLEFKTDLLGQALKKFKPANFESYEIRPT IGMEQPQHYRAKLQFQTRSFGGSVKAGLFAEGSHRLINIDDCLVQDELTQAMMNKVTSLL DKYKLPIYNERKISGIRTVMIRRALGSNQVQLIFVTSKSVSLTKLVKELTLRYPEIVTVA INYNYSKSSEIYGQETEIIWGQDTIQEEVLDYNFALSPRAFYQLNPKQTEVLYSQAVEAL EVDKDEHLIDAYCGVGTIGLAFVNKVKSIRGMDIIPEAIEDARKNAKSLGLGNTHYEVGK AEDIIPRWYKEGYRADALIVDPPRTGLDDKLLKTILEYTPKKMVYVSCNVSTLARDLVSL AKVYDVNYIQSVDMFPHTARTEAVVKLTKKM >gi|311100154|gb|AEKO01000011.1| GENE 6 8157 - 9149 1171 330 aa, chain + ## HITS:1 COG:SPy1539 KEGG:ns NR:ns ## COG: SPy1539 COG2502 # Protein_GI_number: 15675438 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Streptococcus pyogenes M1 GAS # 1 330 1 330 330 615 90.0 1e-176 MKKSFIHQQKEISFVKNTFTRYLIDKLDVVEVQGPILSKVGDGMQDNLSGIENPVTVNVL QIPDATYEVVHSLAKWKRHTLARFGFNEGEGLVVNMKALRPDEDSLDATHSVYVDQWDWE KVIPDGHRNIAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHSEELVEKYPDL TPKEREDAITKEYGAVFLIGIGGVLPDGKPHDGRAPDYDDWTTESENGYHGLNGDILVWN EQLGHAFELSSMGIRVDEDALKRQVEITGDQDRLKLDWHQALLHGLFPLTIGGGIGQSRM AMFLLRKKHIGEVQTSVWPDAVRETYENIL >gi|311100154|gb|AEKO01000011.1| GENE 7 9301 - 10659 1482 452 aa, chain - ## HITS:1 COG:SP0413 KEGG:ns NR:ns ## COG: SP0413 COG0527 # Protein_GI_number: 15900332 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Streptococcus pneumoniae TIGR4 # 1 448 1 448 454 707 77.0 0 MKVIKFGGSSLASATQLEKVLNIVKSDPERRFVVVSAPGKRNDEDTKVTDALIKYYKHYI KGADVKADQEWIINRYQAMVDELGFKSKEMVNISKAITDLATLPIEDNNFLYDTFLAAGE DNNAKLIAEYFRNNDIEARYVHPREAGILVSSEPGNARILPGSYDKLEELRESDEVLIIP GFFGVTSDNQICTFSRGGSDITGSIVAAGVKADLYENFTDVDGIFAAHPGVVHEPHSIPE LTYKEMRELAYAGFSVLHDEALLPAYRGKIPLVIKNTNNPDHPGTRIILEHQGATVPVVG IASDDKFVSINMSKYLMNREVGFGRKVLQILEDLNIRWEHMPSGIDDLSIIIRERELTPI KEQEILSYLTRELGVDEVEIEHGLSILVIVGENMRDHIGVTATAAKALSEKHINLEMISQ GSSEVSVMFVIETEQEKEAVRALYDAFFRSNN >gi|311100154|gb|AEKO01000011.1| GENE 8 10790 - 11428 543 212 aa, chain + ## HITS:1 COG:L150333 KEGG:ns NR:ns ## COG: L150333 COG0637 # Protein_GI_number: 15672725 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Lactococcus lactis # 3 211 4 212 222 217 52.0 1e-56 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENIFRDDY DKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLKIGLASSSVKADIFRAL EENRLQGFFDVVLSGEEFKDSKPNPEIYLTALKQLNVQANRALIIEDSEKGIAAGVAAGV EVWAIKDNRFGMDQSAAKGLLDSLTDVLDLIK >gi|311100154|gb|AEKO01000011.1| GENE 9 11641 - 12432 815 263 aa, chain + ## HITS:1 COG:SPy1758 KEGG:ns NR:ns ## COG: SPy1758 COG1024 # Protein_GI_number: 15675604 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Streptococcus pyogenes M1 GAS # 1 263 1 263 263 334 61.0 1e-91 MAYETILYSVEEGVATLTLNRPEVQNGFNIPVCDEIMAAIEEAGQDASVKFLVINANGKV FSVGGDLDQMKKAVAVDDVQSLVRIAEQVNEISFALKKLPKPVIMVVDGPCAGAAANLAV AADFTIASEKAKFIQAFVGVGLAPDAGGLYLLTRSIGINRATQITMTGEPVSAEKALDWG IAYKVVDSEKLEKTVSQLIKKLNRSSVNSFKAIKEMVWESEFAGWEKYAKLELDLQKSLA FTEDFKEGVRAYSERRRPKFQGK >gi|311100154|gb|AEKO01000011.1| GENE 10 12647 - 12970 291 107 aa, chain + ## HITS:1 COG:SP0416 KEGG:ns NR:ns ## COG: SP0416 COG1846 # Protein_GI_number: 15900335 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 107 38 144 144 137 68.0 4e-33 MHTIDVIGTHPDTTPSAVARELMLTLGTVTTSLNKLEKKGYIIRTRSSVDRRVVHLSLSK KGRLVYRLHRGFHKSMVMRITEGFNDEELKVMSKGLENLHAFLEELK >gi|311100154|gb|AEKO01000011.1| GENE 11 12970 - 13932 890 320 aa, chain + ## HITS:1 COG:SP0417 KEGG:ns NR:ns ## COG: SP0417 COG0332 # Protein_GI_number: 15900336 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Streptococcus pneumoniae TIGR4 # 1 320 1 324 324 404 65.0 1e-112 MAFAKISQVAHYAPAQVVTNDDLSKIMDTSDEWIRSRTGIQERRISLNENTSDLATNVAY QLLEKSGLSPEELDFVLVATISPDNSMPSVAARVQGTIGAVNAFAFDITAACSGFVFALA TAEKLIKSGAYKKGLVIGAEVLSKTLDWSDRTTAVLFGDGAGGVLLEESEEEHFFGESLN TDGSKGGLESGASAVISPYSDGTEQPNPYMQMDGKAIFDFAVKTVSKSIKALVEEKGDPD YFLLHQANIRILDIMAKKIDVSRDKFLANMMSYGNTSAASIPILLSENVANGTLQLGSDQ TILLSGFGGGLTWGSLIVKI >gi|311100154|gb|AEKO01000011.1| GENE 12 13996 - 14220 401 74 aa, chain + ## HITS:1 COG:SPy1753 KEGG:ns NR:ns ## COG: SPy1753 COG0236 # Protein_GI_number: 15675601 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 74 1 74 74 73 90.0 7e-14 MAVFEKVQEIIVEELGKDAEEVKVETTFDELDADSLDVFQVISEIEDEFDIQIETEEGLN TVGDLVAYVEEKTK >gi|311100154|gb|AEKO01000011.1| GENE 13 14326 - 15291 1268 321 aa, chain + ## HITS:1 COG:SPy1751 KEGG:ns NR:ns ## COG: SPy1751 COG2070 # Protein_GI_number: 15675600 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Streptococcus pyogenes M1 GAS # 1 321 1 321 323 436 81.0 1e-122 MKSRITELLGIKYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGGNAPKEVVKANIGRVKQ ITDKPFGVNIMLLSPFVDDIVDLVIEEGVKVVTTGAGNPGKYMERFHEAGITVIPVVPSV ALAKRMEKLGADAVVAEGMEAGGHIGKLTTMALVRQVADAVSIPVVGAGGVADGRGMAAV LMLGAEAVQVGTRFAVAKESNAHQNFKDKILKAKDIDTVISASVVGHPVRAIKNKLATEY NQAEKDFLAGKKTQEEIEELGAGALRNAVVDGDVEYGSVMAGQIAGLVRKEETCAEILED LYTGAAKVIKEEAARWADVNV >gi|311100154|gb|AEKO01000011.1| GENE 14 15365 - 16234 1005 289 aa, chain + ## HITS:1 COG:SP0420 KEGG:ns NR:ns ## COG: SP0420 COG0331 # Protein_GI_number: 15900339 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 287 18 304 306 397 75.0 1e-110 MASDLYATYPVVKETFDTASRILGYDLRELIDSNEEKLNQTRYTQPAILTTSVAIYRLLA ENGITPDIVAGLSLGEYSALVAAGALSFEDAVALVAKRGEFMETAAPAGSGKMVAVMNTD QSLIEEICQKASEKGVVTPANYNTPAQIVIGGEVVAVDYAVELLKEAGAKRLIPLNVSGP FHTALLESASQKLAEELEKVSFNDFALPLVGNTEAQIMKSEDVKTLLARQVMEPVRFYDS IATIQEFGVDEVIEIGPGKVLSGFLKKIDKTLPTHNVEDQATLDALLNA >gi|311100154|gb|AEKO01000011.1| GENE 15 16247 - 16981 250 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 239 1 238 242 100 31 4e-20 MELKNKNVFVTGSTRGIGLAVAHKFASLGANVVLNGRSEISEDLLAQFADYGVTVVGISG DISNGEDAKRMVAEAIEKLGSVDVLVNNAGITNDKLMLKMSEEDFERVLKINLTGAFNMT QAVLKPMSKARQGAIINMSSVVGLMGNVGQANYAASKAGLIGFTKSVAREVAARGVRVNA IAPGFIESDMTDAIPEKMKDAMIAQVPMKRIGQAEEVAEVAAFLASQEYLTGQTIAIDGG MTMQ >gi|311100154|gb|AEKO01000011.1| GENE 16 17043 - 18275 1673 410 aa, chain + ## HITS:1 COG:SP0422 KEGG:ns NR:ns ## COG: SP0422 COG0304 # Protein_GI_number: 15900341 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Streptococcus pneumoniae TIGR4 # 1 410 1 410 411 628 76.0 1e-180 MSTNRVVVTGYGVTSPIGNTPEEFWNSLHDGKIGIKPITKFDASEIPVFNAGEIQDFPFD KYFVKKDTNRMDTYSLYAIYAAMEALENSGLNMEEVNRDRVGVIVSSGIGGLQELEDQII RMHERGMRRIKPMFIPKALSNMGAGNIALKIGAQGVCKSVTTACASANDAIGEAFREIKF GLHDVVLAGGAEASITKIGIGGFNALTALSTTEDPERSSIPFDKDRNGFVMGEGAGVLVI ESLEHAQKRGANILAEIVGYGSNCDAYHMTTPTPDGSGAAKAIKLAINEAGIKPEDVDYV NAHGTSTPANEKGESGAIVSVLGKDVPVSSTKSFTGHLLGAAGAVEAIATIEAIRHSYVP KTAGTKELSDYIEANVVYGQGQEADIKYAISNTFGFGGHNAVLAFKRWED >gi|311100154|gb|AEKO01000011.1| GENE 17 18279 - 18773 597 164 aa, chain + ## HITS:1 COG:SPy1747 KEGG:ns NR:ns ## COG: SPy1747 COG0511 # Protein_GI_number: 15675596 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Streptococcus pyogenes M1 GAS # 1 164 1 166 166 150 58.0 7e-37 MNISEIKDLLAQFDASTLREFSYKNNGEELNLSKNQTSSVTAAPVAPTVEVVAPAPQAPV APVAAAAAVETPATPVEEASAPAQAAEGEVIESPLVGVAYLSPSPEKPAFVSVGDTVKKG QTLLIVEAMKVMNEVPAPKDGVITEILVTNEEVVDYGKGLVRIK >gi|311100154|gb|AEKO01000011.1| GENE 18 18770 - 19195 506 141 aa, chain + ## HITS:1 COG:SP0424 KEGG:ns NR:ns ## COG: SP0424 COG0764 # Protein_GI_number: 15900343 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Streptococcus pneumoniae TIGR4 # 3 141 2 140 140 248 94.0 2e-66 MTIDINAIREALPHRYPMLLVDRVLEVSEDEITAIKNVTINEPFFNGHFPQYPVMPGVLI MEALAQTAGVLELSKPENKGKLVFYAGMDKVKFKKQVVPGDQLVMTAKFVKRRGTIAVVE AKAEVDGKLAASGTLTFAIGS >gi|311100154|gb|AEKO01000011.1| GENE 19 19315 - 20685 1426 456 aa, chain + ## HITS:1 COG:SP0425 KEGG:ns NR:ns ## COG: SP0425 COG0439 # Protein_GI_number: 15900344 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Streptococcus pneumoniae TIGR4 # 1 455 1 455 455 751 83.0 0 MFKKLLIANRGEIAVRIIRAARELGIQTVAIYSEADRDSLHTMLADEAICIGPARSTDSY LNMNRVLSAAIVTEAQAIHPGFGFLSENSKFSTLCEEMNIKFIGPSGKVMDKMGDKINAR AEMIRANVPVIPGSDGEVFTAEEALEVAKRLGYPVMLKASAGGGGKGIRKVNTEEELAPA FESASQEAKAAFGNGAMYIEKVIYPARHIEVQILGDSYGNIVHLGERDCSLQRNNQKVLE ESPSVAIGKTLRHEIGSAAVRAAKAVNYENAGTIEFLLDEKSGQFYFMEMNTRVQVEHPV TEFVSGVDIVKEQIRIAAGEKLSVTQDDIEIKGHAIECRINAENPKFNFAPSPGKISNLY LPSGGVGLRVDSAVYPGYTIPPYYDSMIAKIIVHGENRFEALMKMQRALYELEIDGVVTN ADFQLDLISDRSVIAGDYDTSFLMETFLPEYQNREE >gi|311100154|gb|AEKO01000011.1| GENE 20 20691 - 21557 1027 288 aa, chain + ## HITS:1 COG:SP0426 KEGG:ns NR:ns ## COG: SP0426 COG0777 # Protein_GI_number: 15900345 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 285 288 464 79.0 1e-130 MGLFDRKEKYIRINPNRSVRNGVDQQVPEVPDELFAKCPGCKQAIYQKDLGQAKICPNCS YTFRISAKGRLDLTVDEGTFQELFTGIKTENPLNFPGYMEKLAATKEKTGLDEAVVTGVA TIKGQKTALAIMDSNFIMASMGTVVGEKITKLFEYAISEKLPVVIFTASGGARMQEGIMS LMQMAKVSAAVKRHSNAGLLYLTVLTDPTTGGVTASFAMEGDIILAEPQTLIGFAGRRVI ENTVRETLPDDFQKAEFLQEHGFVDAIVKRTELADTIATLLSFHGGVQ >gi|311100154|gb|AEKO01000011.1| GENE 21 21554 - 22324 966 256 aa, chain + ## HITS:1 COG:SPy1743 KEGG:ns NR:ns ## COG: SPy1743 COG0825 # Protein_GI_number: 15675592 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 256 1 256 256 385 79.0 1e-107 MSDVARILKEARDQGRLTALDFAKGIFDDFIELHGDRNFRDDGAVIGGIGRLNGQAVTVV GIQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERG QGEAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADKVWMLENTVYSILSPEGFATI LWKDGSRSEEAAELMKITSGELLNMGIVDKVIPERGYFTSEIIEAIKTAIIDELAELSQL SKEDLLDARYQRFRKY >gi|311100154|gb|AEKO01000011.1| GENE 22 22354 - 22836 605 160 aa, chain - ## HITS:1 COG:SPy1642 KEGG:ns NR:ns ## COG: SPy1642 COG1854 # Protein_GI_number: 15675515 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Streptococcus pyogenes M1 GAS # 1 160 1 160 160 277 81.0 6e-75 MPKDVTVESFELDHTIVKAPYVRLISEEVGPKGDIITNFDIRLIQPNENSIDTGGLHTIE HLLAKLIRQRIDGLIDCSPFGCRTGFHMIMWGKQDPTEIAKVIKSSLEAIANEITWEDVP GTTIESCGNYKDHSLHSAKEWAKLILEQGISDQAFERHTV >gi|311100154|gb|AEKO01000011.1| GENE 23 23013 - 24179 836 388 aa, chain - ## HITS:1 COG:SP1129 KEGG:ns NR:ns ## COG: SP1129 COG0582 # Protein_GI_number: 15900995 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 1 388 1 387 387 395 54.0 1e-109 MKINEIKKKDGSTVYRTNIYLGVDVITGKKVTTKVTARTKKELKTKAQQAHFDFKANGST RYKEVVIETYEELASSWWDNYKNTVKVNTRNTQKSLLNNHVLPLFGEFKLNKLTTPVIQS MMNKLANSTNTGEVGAYLHYGKIHTLNKRILQYGVILQVIPTNPANNVVLPRNTQKDKKA KVKHFNNDELKQFLTYLDSLDNSKYKNYYDITLYKFLLATGCRINEALALSWSDIDLDNS VVHITKTLNCDMKLNSPKSKAGYRDIDIDQQTVTMLKRYQRKQTQEAWKLGRTETVVFSD FINAYPNYKAVAGRLKTHFKKAGVNNIGFHGFRHTHASLLLNSGIPYKELQHRLGHSTLS MTMDTYSHLSKENAKKATSFYEQALKSI >gi|311100154|gb|AEKO01000011.1| GENE 24 24368 - 25504 614 378 aa, chain - ## HITS:1 COG:SA1431 KEGG:ns NR:ns ## COG: SA1431 COG3177 # Protein_GI_number: 15927183 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 10 371 51 402 406 183 35.0 4e-46 MKRDAFSTNKYPLFVVPTLEIQLLSQKIIELSSKITDLANKLPDVAHQQFYNEQLFNAII STNEIEGIGTTRKDVAVAIDALNKDRKEKLKHKSTVRMYLDILSEDYLNITELIHIREIY DALTNGEIEDEDQLDGELFRKDLVSIVNNKTGKIEHIPPSKEQTIKEMLKSWLDFINTGT IPFLIKASLAHYFFENIHPFYDGNGRTGRYILSKYLSRKLDKFSGLIISKKINEDKAKYY KSFAETGDTLNRADGTRFVQSMLSFIIKGQSEIIDTLAEKQEMLHYYHTKLQESSFSDIE GTVLFLLIQSQLFVSDFEASINDNNLLELLEHTEYSQRSLKKTIKELEEKKVLIKVAKRP LKHIIVDDFFDYDKKINF >gi|311100154|gb|AEKO01000011.1| GENE 25 26001 - 26822 544 273 aa, chain - ## HITS:1 COG:no KEGG:str1386 NR:ns ## KEGG: str1386 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 43 272 5 234 345 212 57.0 1e-53 MKKKIIVMLVALLVVVGGSAYYFLSYAPHQEAVTNFNKAVQTVKSKNKTLKSEIAKAEKL VKSNQKPLDEKTLDNLKTAVATAKSDLRKIPKVADKTEAIKKQTKSLNQPIDYSKATQSL ADSSLAYTNSVKQLAQITNPSQSFVEERLKEIDTVTGVQSVTESNDPNGNLNKQGGYTAS IYFTDNQVTEAVEGADIVDKGTDAGGNIEVYKTSDEAKSRNAYLSAFDGQGILNPGSHYV YGTVVIRTSRHLTASQQTALTEKIYNKLIELKK >gi|311100154|gb|AEKO01000011.1| GENE 26 26944 - 27507 339 187 aa, chain - ## HITS:1 COG:SP1130 KEGG:ns NR:ns ## COG: SP1130 COG1396 # Protein_GI_number: 15900996 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 4 99 3 100 282 87 51.0 1e-17 MDSINKKQVGARIKDIRLSLGESMEQFGARFNTSKGTVNNWEKGRNIPNRKNLKEIALIS GTPVSVLLKGSTAHMPFRFPDLVDILSNPDYYVTICRDMIITNTPDNYQEDLYFMLTTGV VTIFKKVNINDNIYDFVGFPPELNREEWVTCDLYIKNFFKGSYSMVNITFSDLKKLISFL DKLIDSR >gi|311100154|gb|AEKO01000011.1| GENE 27 27631 - 27834 137 67 aa, chain + ## HITS:1 COG:SP1131 KEGG:ns NR:ns ## COG: SP1131 COG1476 # Protein_GI_number: 15900997 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 4 67 5 68 117 90 71.0 7e-19 MSPNKIKGYRNMLGLTQEQMGKKLGITKQTYHNKEIGRNSFSDKEKMTFKQLLLPFFPNI TIEDIFF >gi|311100154|gb|AEKO01000011.1| GENE 28 27894 - 28517 254 207 aa, chain + ## HITS:1 COG:SP1134 KEGG:ns NR:ns ## COG: SP1134 COG3646 # Protein_GI_number: 15901000 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pneumoniae TIGR4 # 1 204 1 204 205 244 66.0 6e-65 MNLVYRDGKKEPYTTSEIIAGCAEVTHHTIQELLRKHKADFESYGIIAFKMRKLDGRGRP MKIYRLNEQQATLLITYLKNTAPVRKFKKNLVKAFFELRNEVAEFRYQRAIEKPKRKELV KAISEWENAPKHAHSTVTNLLLKAVTGFNAKQLRALRGEEIALNSLYSVELKEYQALEDM VIAMIQLGFDYQDIKTMVNKKNSLQGA >gi|311100154|gb|AEKO01000011.1| GENE 29 28541 - 28726 258 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|148988903|ref|ZP_01820318.1| ## NR: gi|148988903|ref|ZP_01820318.1| hypothetical protein CGSSp6BS73_07493 [Streptococcus pneumoniae SP6-BS73] # 1 61 1 61 61 104 90.0 2e-21 MNFKEFKTWLGDAVSMAESMGLPENKAVLDDLIENTANNLVFIAELVESRQLIYRKPRHE D >gi|311100154|gb|AEKO01000011.1| GENE 30 29201 - 29647 346 148 aa, chain + ## HITS:1 COG:no KEGG:smi_2012 NR:ns ## KEGG: smi_2012 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 147 1 142 143 148 55.0 6e-35 MEQYFQYFESKLQVTEEKLDILSEWHIAKGHSGATEIAEDCREAITELWIEFYKLSETYK QQETDHETFLNENVTNLLGELRKHDEFLADVSNDLGKERPHWLLYNYLNRAVRSFTDPNE LATDNTGNIWDYLRSLIIKDLKERGLLG >gi|311100154|gb|AEKO01000011.1| GENE 31 29644 - 29844 263 66 aa, chain + ## HITS:1 COG:no KEGG:SPH_0295 NR:ns ## KEGG: SPH_0295 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 66 1 66 66 68 62.0 6e-11 MTLDLDKMTQAEFDELMVDLREKEPNLFQFIVDFINKKVSIQEVEAFQKMEHEVRQLYIK NYKARA >gi|311100154|gb|AEKO01000011.1| GENE 32 29846 - 30043 233 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNELNLTPTQTVIFLIVTLLLLAYRLHRLNKEKITIELPEQIEQPNPAYNPNYGRYIQLQ GHYYN >gi|311100154|gb|AEKO01000011.1| GENE 33 30055 - 30291 254 78 aa, chain + ## HITS:1 COG:no KEGG:str0779 NR:ns ## KEGG: str0779 # Name: not_defined # Def: unknown protein, phage associated # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 5 74 3 72 78 86 64.0 3e-16 MENKEPFDLAKSRAENFGLDLEEAYDTMLAFSLENKFDCYSIEERNQLERVLETLMDFSD MWMNGQIILVGKEREAIE >gi|311100154|gb|AEKO01000011.1| GENE 34 30288 - 30638 370 116 aa, chain + ## HITS:1 COG:no KEGG:M6_Spy1814 NR:ns ## KEGG: M6_Spy1814 # Name: not_defined # Def: unknown phage protein # Organism: S.pyogenes_MGAS10394 # Pathway: not_defined # 5 112 2 109 109 183 87.0 2e-45 MTLPTLPENYRRVLNLIRVGADNPITGAEIALILKLEERTVQSIVSRLITRYGIPIIGIR HGFNRGYFISADKAELLDGAKAFYNQVQKEQKRLSVLLNADLESYKALLKGADMNV >gi|311100154|gb|AEKO01000011.1| GENE 35 30631 - 30903 198 90 aa, chain + ## HITS:1 COG:no KEGG:SPH_0298 NR:ns ## KEGG: SPH_0298 # Name: not_defined # Def: phage protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 90 1 90 93 134 73.0 9e-31 MFSLSKESEYELTHGVLKLVENYLEARDTVKPRLTGLITAQQAMDELGLKYNTLRRWEEA GLKRYQPPVEDTRKVYYRISDILAFLGVYN >gi|311100154|gb|AEKO01000011.1| GENE 36 30920 - 31786 353 288 aa, chain + ## HITS:1 COG:no KEGG:SPH_0299 NR:ns ## KEGG: SPH_0299 # Name: not_defined # Def: phage protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 286 1 288 288 436 75.0 1e-121 MPIYESKGFGNDLNLFDKKAPFDYIADFRVFGVPKGIDLEKYKRTQAPYCLSGKVIPEKN GSYKRNNSSLIYRDLIFLDYDDIQGTSESFIEAVSSALFGYSYILYPTIKHCLEKPRFRL VVKPDNVMNEVAYKQVVKDIADKIGLPFDSTSLTWSQLQGLPVTTGDPDNYQRYVNRGKD YPVPKARQNLTTQKNTSPYTPKTSGQKSITMRVIDTLLHGFGDEGGRNVALTRFVGILLN RWVDCDIETAYELTQIANSVTSSPIPDKELDRTFESIVKAEIRKRGLT >gi|311100154|gb|AEKO01000011.1| GENE 37 31846 - 33306 665 486 aa, chain + ## HITS:1 COG:L37667 KEGG:ns NR:ns ## COG: L37667 COG3378 # Protein_GI_number: 15672011 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Lactococcus lactis # 67 425 121 473 542 257 41.0 4e-68 MRKLYNRLWELGEVWRNEHKEEKEITKGNRKGEVETKIPRPSVAEVANILLKHCYFTFIG YSKLTDSSQLYFYHLDLGYYIASRDIVNKLILKFDSRLTSKRFTEEVIIFLRTETKIKPP MQESYLIPVRNGIFNLHTKELEPFIPKHIITTKIATAYNPEAQKPLLGGWFDFDEWLDGL ACGDKEITTLLWQVMNEAINPNRTRKKMVVLTGDGNNGKGTFQALLENLIGKENISNLKP NQFQEQHLLSALNGKVCNIGDDISDKYLDSVSDLMSIVTGDTIQVNPKHLQPYEASYRLL CIFSGNGIPRSRNKSQGWYRRLCIVPFNADFNGTVERPEIKDEFIKSKELLEWVLFKILN MAEFDRFIEANAVKDMLDEYKEDNDFYYSFVVGTYIPNGYHELQHVPLPIIKQWLEEYTE DEGIKNANLYSYGKKILAVLNKESDKTYTLKSGRVPPGDFKALDPHGFYKTKLREAHKGI HRDNKE >gi|311100154|gb|AEKO01000011.1| GENE 38 33640 - 33978 113 112 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_10286 NR:ns ## KEGG: HMPREF0837_10286 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 16 75 4 63 152 71 63.0 8e-12 MTENNYLEQAEKDRLELEQHRLNYMADDTSIEPSDIPKLLEIVRKLQAEDTSLNIYELYK HPEARAKLFSQIPEALLYGFEYDTDTSPKIGILRVPRTAIRNNSKKSHCQHR >gi|311100154|gb|AEKO01000011.1| GENE 39 33872 - 34081 149 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALNMTPTQAQRSAFCEYLEQQYETILKKVIASTDKQALGELLDLLELPAETKSQFIRDI AVSGLLSKD >gi|311100154|gb|AEKO01000011.1| GENE 40 34152 - 34652 119 166 aa, chain + ## HITS:1 COG:no KEGG:SPH_0303 NR:ns ## KEGG: SPH_0303 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 166 1 166 169 258 77.0 4e-68 MKQLAIETITKPMKLRGISKGIAELDGQRLEIDLDNLMIDFGGESFELDRIAGTKGGYRY FFLCPDCGRRCRLLYKRYLYFSCGTCQDIHKDTLNRSKTDCQYYFSLALKEARKIDPGYY PEKGYVDYDNFPSRPKRMRHKTYWRHYKRFTSYLDIGLRYWLSRLS >gi|311100154|gb|AEKO01000011.1| GENE 41 34770 - 35162 129 130 aa, chain + ## HITS:1 COG:no KEGG:smi_2000 NR:ns ## KEGG: smi_2000 # Name: not_defined # Def: transcriptional regulator # Organism: S.mitis_B6 # Pathway: not_defined # 1 130 1 130 130 222 89.0 3e-57 MELDKFKTMMNVRKRMTYFLRFQRMAGNENQVAIDEEVWRLALPAQWNLSGENEKAIREG LEIFTHDINSIENKRARKYFIIHYCYMRKKTISECVEMAGTSVTSYHRYKQIAVLNFARI HQNGELEVYK >gi|311100154|gb|AEKO01000011.1| GENE 42 35446 - 36396 282 316 aa, chain - ## HITS:1 COG:PM1540 KEGG:ns NR:ns ## COG: PM1540 COG4823 # Protein_GI_number: 15603405 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Pasteurella multocida # 1 236 5 236 309 84 25.0 2e-16 MKPFKNLDEQLDILTDRGLIITNRERTRKYLLSNNYYNIINGYSKFFQQNGTDDYIEGVT FDEVASLYTFDKDIKRAVLQSILEAEHHIKSIVAHRFAEAYEDKKYAYLDTQSYDNNKIL EVGDIISKFSKIIKNKKNKCETSIYHYFHNHGDVPIWVLTDYLEFGITRRFISNLPTRVQ NNIAKDMVSFIKTSNPSFTGVFAPETMLSFLKNINQTRNVCAHNNRLLNYTCIANSVCFD FIHREFDLLDDDARKSVYSTVVSLQCFISAEEFNRLWNTIRKKVQKLDRKINSVDINLIN RALGFPDNWHLNDPRR >gi|311100154|gb|AEKO01000011.1| GENE 43 36989 - 38596 2244 535 aa, chain + ## HITS:1 COG:SPy1633 KEGG:ns NR:ns ## COG: SPy1633 COG1418 # Protein_GI_number: 15675508 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 535 1 535 535 731 82.0 0 MINMIILVVFALIGLVVGYLAISIKLSKAKEQAETTLLKAEQDAVNLRSQAEHDADHLRV TAERESKAQRKEFLLEAKEEARKYREDIEKEFKSERQELKQMENRLTERATSLDRKDENL SSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQAELERVGQMTIAEAREVILTETEN NLTHEIATRIKDAEAQVKDTVDKKAKNLLAQAMQRLAGDYVTEQTVTTVHLPDDNMKGRI IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPVRREIARMTLEALIKDGRIHPARIE ELVEKSRQEMDNRIREYGEEAAYEIGAMNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK LAGIMAGELGENVALARRAGFLHDMGKAIDKEVEGSHVEIGTEFARKYKEHPVVVNAIAS HHGDVEPESVIAVIVAAADALSSARPGARNESVENYVKRLRDLEEIASSFDGVQTSFALQ AGREIRIMVHPNKISDDEVTILSHKVREQIEKNLDYPGNIKVTVIREFRAVDYAK >gi|311100154|gb|AEKO01000011.1| GENE 44 38809 - 39555 809 248 aa, chain + ## HITS:1 COG:SPy0853 KEGG:ns NR:ns ## COG: SPy0853 COG1349 # Protein_GI_number: 15674886 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Streptococcus pyogenes M1 GAS # 11 248 1 237 237 232 52.0 6e-61 MIKSERKQIILSQLKQDGFVTLENLTVLLSDTSESTIRRDLDELAADGQLKRVHGGAESI HGLKEEIANSQKAIRNVKEKAQLAGYAADLIKEGDVVFLEASTTNELLISHLSNRQVTVV TNSIHHAVKLVDLGVSTRIVGGKVKHSTDASIGSTAQEQIRQLNFDCAFIGANGVDANYF TTPDMEEAVIKRTVIANSQKAYVLADASKLGQITYAKVAEVEKVTIITNASEEELLKELK EKTRVIEV >gi|311100154|gb|AEKO01000011.1| GENE 45 39552 - 40463 978 303 aa, chain + ## HITS:1 COG:SPy0854 KEGG:ns NR:ns ## COG: SPy0854 COG1105 # Protein_GI_number: 15674887 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Streptococcus pyogenes M1 GAS # 1 302 1 302 303 461 77.0 1e-130 MIYTVTLNPSIDFIVRIDKVEIGEVNRMESDDKFAGGKGINVSRILQRLGIDNTATGFIG GFTGRFVTDGLDAEGIKTKFVAVDQDTRINVKIKADQETEINGTGPVINDYQLAELEAIL SSVSADDVVVFAGSAPSNLGNKVYNKLIPLVRETGAQVVCDFEGQTLLDSLAYQPLLVKP NNHELEAIFNVKLNGLADVETYARELLAKGAQNVIISMAGDGALLVTPEAAYFSKPIKGT VKNSVGAGDSMVAGFTGEFVKSGDPIEALKWGVACGTSTAFSDDLATIEFIKETYNKVEV EKL >gi|311100154|gb|AEKO01000011.1| GENE 46 40460 - 42436 2761 658 aa, chain + ## HITS:1 COG:SPy0855_3 KEGG:ns NR:ns ## COG: SPy0855_3 COG1299 # Protein_GI_number: 15674888 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Streptococcus pyogenes M1 GAS # 297 654 1 358 360 507 86.0 1e-143 MKIQDLLNTKVMLLDLQATTKEAAIDEMINSLVDNGVVADFDVFKAGIMAREAQTSTGLG DGIAMPHSKNAAVKEATVLFAKSNKGVDYESLDGQPTDLFFMIAAPEGANDTHLAALAEL SKYLMQDGFADRLRKVTSPDEVIAAFNTGEEEAQAEEAKKAQAVKEAASSDKPLIVAVTA CTTGIAHTYMAEEALIKTGEEMGVNVRVETNGASGVGTPLTAEEISKAVGVIVAADKAVE TARFDGKNLLSKPVASGIRQPQELIQNILDGKAEVFHAENAGAAQESSEKLSLGGAFYKH LMSGVSQMLPFVIGGGIMIALAFLLDQIMGVPKDQLSQLGSYHEIAAQFKAIGGAAFGFM LPVLAGYIAYSIAEKPGLVSGFVAGAIASSGAAFGGVPFASGGKATLALAGVSSGFLGAL VGGFLAGGVILVLRKLLAGIPRALEGIRSILLLPLLGVFATGFLMLAVNIPMAAINTGLN NFLSSLSGSSAVLLGLLVGGMMAVDMGGPVNKAAYVFGTGTLAATVTSGGSVVMAAVMAA GMVPPLAVFVATLLFKDKFTEEERNSGLTNIVMGLSFITEGAIPFGAADPARAIPSFIVG SALTGALVGMAGIKLMAPHGGIFVIALTSNALLYLLFILIGAVVSGILFGFLRKPLDK >gi|311100154|gb|AEKO01000011.1| GENE 47 42584 - 43936 467 450 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 2 444 1 442 458 184 29 2e-45 MVKEYDYIVIGGGSGGVASANRAAMYGAKVILFEGKEVGGTCVNVGCVPKKVMWYGAQVA ETLHRYAGEYGFDVTLNKFDFATLKANRQAYIDRIHGSYERGFDSNGVERVYEYARFVDP HTVEVAGELYTAPHILIATGGHSLYPNIPGSEYGITSDGFFELDEVPKRTAVIGGGYIGV EVAGVLNALGSDTHLFIRKDRPLRTFDKDIIDVLVDEMAKSGPTLHMHANATEVVKNADD SLTISFDNEETITVDCLIWAVGRAANISGFGLEKTGVELTERGNIYSDEFENTSVPGIYA LGDVTGKLDLTPVAVKAGRQLSERLFNNKVDAKLDYTDVATVVFSHPVIGAIGLTEEKAI TKYGSENIKVYKSSFTPMYTALGDNRQPSTMKLVTLGEDEKIIGLHGIGYGVDEMIQGFS VAIKMGATKADFDNTVAIHPTGSEEFVTMR >gi|311100154|gb|AEKO01000011.1| GENE 48 44048 - 45295 980 415 aa, chain - ## HITS:1 COG:SPy0814 KEGG:ns NR:ns ## COG: SPy0814 COG0285 # Protein_GI_number: 15674855 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Streptococcus pyogenes M1 GAS # 1 414 1 412 422 421 50.0 1e-117 MNYTKTLNFIHSFKGNGRRPQLGRMRWLLKQAGNPQSHYPTVHIVGTNGKGSTTSYLQNI LTKSGYQVGTFTSPYITRFNERISINGTEIPDKDLISLVEKAQVLLDDLEEHTAFERPTE FELVTLLMFLYFDLKQVDIAIIEAGIGGRLDSTNVLSPELVICTSIGFDHTETLGNSLLD IANHKAGVMRENTPILLGRVSTEVEHFFNKKSHDLQAPLAVIDREIQLLPRDNQTIQVSY DHWESPKLKLPMLGQHQENNAGLAVTAAHLLAQTFSKITDKSIQEGIVETHWPGRSEWIG DNIYLDGAHNPQGIASLKQVLKDNFANHRVHILFAGLRRKPLADLLEELKDYDITVTSFD FFEALPLNEYPQHFKRVADYKDWLAQAESANSDDLFVVTGSLYFISELRNYLINE >gi|311100154|gb|AEKO01000011.1| GENE 49 45341 - 45802 526 153 aa, chain - ## HITS:1 COG:no KEGG:str0410 NR:ns ## KEGG: str0410 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 134 1 134 180 114 91.0 1e-24 MSENYSRRNHSSKEEKKSAPMVTEHVTKGVTAFQKVLTAVGTILSIIVASITIMNFTSSK NKDTSDSSANQSTVVIKEGNNKTQESSVASSSYGNATDSETETSSQAGNNTYSSSADTTT GGNTTTSSSAATADTTTGNTTTGDATTSGAVSN >gi|311100154|gb|AEKO01000011.1| GENE 50 45911 - 47056 1281 381 aa, chain + ## HITS:1 COG:SPy0816 KEGG:ns NR:ns ## COG: SPy0816 COG1104 # Protein_GI_number: 15674857 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 1 371 1 370 373 560 73.0 1e-159 MIYFDNSATTMPYPEALRTYQEVATKIFGNPSSLHQLGTSATRILEASRKQVADLIGKSA DEIFFTSGGTEGDNWVIKGVAFEKEPYGKHVIVSDIEHPAVKESAKWLSEHGFEVSYALV NEQGFVDVEALAGLLRPDTILVSVMAVNNEIGSIQPIQEISDLLANEPTISFHVDAVQAI GKIPVSAYLTDRVDFATFSGHKFHAVRGVGFVYKKAGKKITPFLTGGGQEKDLRSTTENV AGIASMAKALRLVTDKEEFSLSKIAKMKKIIFDELAKYEDITIFSGEGEDFAPNILTFGI KGVRGEVVVHAFEEHQIYISTTSACSSKAGKPAGTLISMGVPTKLAQTAVRISLDDDNDM GQVEQFLTIFKQVYAKTQKVR >gi|311100154|gb|AEKO01000011.1| GENE 51 47110 - 48333 1446 407 aa, chain + ## HITS:1 COG:SP0881 KEGG:ns NR:ns ## COG: SP0881 COG0301 # Protein_GI_number: 15900764 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Streptococcus pneumoniae TIGR4 # 3 407 1 404 404 668 83.0 0 MTLTYSEIMVRYGELSTKGKNRMRFINKLRNNIKDVLSIYPEVKVTFDRDRGHIYLNGTD YELVAESLKQIFGIQAFSPVYKFEKDVEVLKKAVQDIMTGLYRDGLTFKVTAKRSDHDFV LDSRELNLTLGNAVFDVLPDIKAQMKGPDVNLKVEIRAEAAYISHEEIKGAGGLPVGTAG KGMLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAQDLTRKLTKFGGNIQ FIEVPFTEIQEEIKEKAPEAYLMTLTRRFMMRITDRIREERRGLVIINGESLGQVASQTM ESMQAINAVTCTPVIRPVVTMDKLEIIDLAQKIDTFDISIQPFEDCCTIFAPDRPKTNPK IKNVEQYEGRMDVESLVERAVAGIMVTEITPIEEVQDEVDTLIEDLL >gi|311100154|gb|AEKO01000011.1| GENE 52 48439 - 49950 1603 503 aa, chain + ## HITS:1 COG:SA2441 KEGG:ns NR:ns ## COG: SA2441 COG0438 # Protein_GI_number: 15928234 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Staphylococcus aureus N315 # 1 503 1 502 502 567 54.0 1e-161 MTVYNINLGIGWASSGVEYAQAYRSRIFKNTGIKAKFVFMDMFLQDNLSDLTRNMGFSDE DIIWLYSYFTDLRIAPTTYAVKDLEKEIPYDITRREINGKVVKLFCAKEDIFYAAYLRKE GEDIVHRVEKVSRGCLIRKDFYSYTKMFTEYYTPVDNKAHLYQRRFFNEDGSIAYDEIVD GKDSVFRFPDKILSSKHEFIAYFMSQLGLTDQDIVILDRATGTGQAVFRNTKPAKLGVVV HAEHFSENAVTDKNILWNNFYEYQFSNADKVDFFITATERQRSIMLDQFNKYTPFKPHIV TIPVGSVDKLREPEGERKPFSIITASRLANEKHVDWLAKAVVKAKESLPQVNFDIFGTGA EEAKLKAIIEENQAQDYIHLKGHQDLTEVYKDYELYLSGSKSEGFGLTLLEAVGSGLGMI GFDVRYGNQTFIKDNENGYLIPRFEKDDEPAIVAALADKIVAFFNRSDLDHVHQVSYDIA KGFLTEKIEQKWLNLVKEMTNHD >gi|311100154|gb|AEKO01000011.1| GENE 53 49943 - 51262 1160 439 aa, chain + ## HITS:1 COG:SP1770 KEGG:ns NR:ns ## COG: SP1770 COG1442 # Protein_GI_number: 15901600 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 287 410 282 403 404 73 31.0 8e-13 MINLFENYSQGSWDLHYSLIVAGYVNTTVCLSDDGFLPSDVTSPYLYFTGFDKVQGSALY FNQVPVPDYWEIIGTNSNAEIFRFDKKRGHIHYAHPAHQRLVKAVDWYDESGRLRVTDRY NNKGYRFSQTTYNVKQEATITSYFTPDNKEVIVINHLTKDVILNWKDKVYIFKNKSEFVV FYLKEAGYDLSRILYNSLATPFLTTMNLPNSGQDVLFWQEPITDSVPGNMRLLLDSNHRQ TKIVVQEYAAYTNLLRLISPEQASRVAFLGFMYPFARQNNFQNQALILTNSDQIEHLESI VSEVPTMHYHVGAITEMSSRLMDLAKYSNVSLYPNITTEQVKRLYKEADFYLDINHQNEI LSATRAAFENNLLILAFTNTSHGPDYTAPSNIFSPMNAGQFKQTLKEALGNRDFLSHLLD RQREHAHVATPEDYKKVIG >gi|311100154|gb|AEKO01000011.1| GENE 54 51267 - 51803 311 178 aa, chain + ## HITS:1 COG:no KEGG:str0415 NR:ns ## KEGG: str0415 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_CNRZ # Pathway: not_defined # 1 94 18 111 138 158 87.0 7e-38 MTLEVRNIYPLTATFKKVASLYEAAFPVEERLPLWQLSWNSLKRGQSFLAYFDGKVFIGL TYTIYTDNLVYLLFLAVEESKQSQGYGSQILAQVKEEAGGRPCVLTIEPMDEERVSNRGQ RLKRLAFYERNGYQLLNHFYFEGTERYQILTTDRSLSLDALEQELAKTFLGKYAIRVE >gi|311100154|gb|AEKO01000011.1| GENE 55 52031 - 52345 523 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116627316|ref|YP_819935.1| 50S ribosomal protein L21 [Streptococcus thermophilus LMD-9] # 1 104 1 104 104 206 100 8e-52 MSTYAIIKTGGKQVKVEVGQAIYVEKINAEAGSEVTFNEVVLVGGDKTVVGTPVVEGATV VGTIEKQGKQKKVVTFKYKPKKGSHRKQGHRQPYTKVVINAINA >gi|311100154|gb|AEKO01000011.1| GENE 56 52381 - 52671 491 96 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55820505|ref|YP_138947.1| 50S ribosomal protein L27 [Streptococcus thermophilus LMG 18311] # 1 96 1 96 96 193 100 4e-48 MLKTLENLQLFAHKKGGGSTSNGRDSQAKRLGAKAADGQTVSGGSILYRQRGTHIYPGVN VGRGGDDTLFAKVEGVVRFERKGRDKKQVSVYPVAK >gi|311100154|gb|AEKO01000011.1| GENE 57 52728 - 53423 1197 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116627318|ref|YP_819937.1| acetyltransferase [Streptococcus thermophilus LMD-9] # 1 231 1 231 231 465 96 1e-130 MPLNHYQQEVGPSLADASPGKMPDVALLEGRYCSVEHLTVAEHYKDILDFYFTNQILSDW TYMYAEPFESEEAVRQCLEDYEKSQNPYFFAIRDKASSKVLGTFSLMAITPKNRSVEMGR VILAPTLQKTRAATEAQYLLMKYVFEDLNYRRYEWKCDSLNRPSANAAIRLGFTYEGRFR NHAIYKGRSRDTDWFSIIDSEWPRLKERFENWLAPENFDEQGQQKRSLRDC >gi|311100154|gb|AEKO01000011.1| GENE 58 53624 - 53998 502 124 aa, chain + ## HITS:1 COG:SPy0864 KEGG:ns NR:ns ## COG: SPy0864 COG4835 # Protein_GI_number: 15674892 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 124 1 124 126 163 69.0 6e-41 MDLIREKVFVNRYHYDVRNHEWEKENGVPKTNVEVTFQLHNKDKEASNTSVVAVLQFMIV RDEFVISGIVSQMNHIQNRIVNKPKDFSQEEAESLAAPLLDTLQRLTYEVTEIALDRPGI NLEF >gi|311100154|gb|AEKO01000011.1| GENE 59 54000 - 54842 674 280 aa, chain + ## HITS:1 COG:SPy0865 KEGG:ns NR:ns ## COG: SPy0865 COG1307 # Protein_GI_number: 15674893 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 278 1 282 282 335 59.0 5e-92 MSLAVITDSSVNLPAEIQGHADVYILDIPVIIEEQPFVEGKNLDVNQFYEKMANSEELLK TSQPNLADLDNFLMELGEKGYTHVIGLFLSSGISGFWANSQFLIEDHAKLKVAFPDTKIT AAPMGAMVRNVLHWSEQGMSFENILKKLEEQVENTTAYILVDDLNHLVKGGRLSNGSAIL GNLLSIKPILHFNAEGKIVVFEKVRTEKKAVKRLVALAEDNREMELSILHTNAPEKAEAL KSQLEAQGITVSSVVSLCAVIATHLGEGALVLGLTPKFTK >gi|311100154|gb|AEKO01000011.1| GENE 60 54903 - 55670 1153 255 aa, chain + ## HITS:1 COG:SP1555 KEGG:ns NR:ns ## COG: SP1555 COG0289 # Protein_GI_number: 15901398 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 255 1 255 255 390 76.0 1e-108 MSIKVIVAGFKGRMGSTAVEMVKGDDELTLAALLDPFAAEKEVDGVPVFTDKADLVGFDA DVWVDFTMPAVAYENTRFALENGFAPVVGTTGFTEAQIQELTDLSKDKSIGGLIAPNFAI GAILLMKFAAEASKYFPDLEIIELHHDKKKDAPSGTAVKTAELIREVRETKRQGAEDEVE TLAGARGAEFDGFRIHSVRLPGLVAHQEVIFGAQGEGLTLRHDSYDRISFMGGVNLGIKE VVKRDQLVYGLEHLL >gi|311100154|gb|AEKO01000011.1| GENE 61 55667 - 56869 1144 400 aa, chain + ## HITS:1 COG:SPy0866 KEGG:ns NR:ns ## COG: SPy0866 COG0617 # Protein_GI_number: 15674894 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Streptococcus pyogenes M1 GAS # 6 397 1 392 397 508 65.0 1e-144 MKLSYLPSEFQKALPILEKIKVAGFEAYFVGGSVRDALLNRPIHDVDIASSSYPEETKQI FERTVDIGIEHGTVLVLENGGEYEVTTFRTEDVYVDYRRPSSVSFVRSLEEDLKRRDFTV NAFALNENAEIIDKFNGLADLDNRVLRAVGKAEERFNEDALRIMRGLRFAASLDFDIEEK TFQAMASHAPLLEKISIERSFIEFDKLLLAPHWKKGIKALLATKAYQYLPDFQETAEEWQ DFVADYVEGFRFTSSEQAWAATLLALKHDNPRSFLKKWKTSVNFQKTVQSLVDIFNFRLE RAVTKQDVYQYGKELLEEAETLRRAQGLDVDYERIAELDGQLLIHDKHEIVVNGGTLMKE LGFKPGPDLGRALKAIENAIVDGQLANAEEAIMAFVQAMK >gi|311100154|gb|AEKO01000011.1| GENE 62 56953 - 58626 1670 557 aa, chain + ## HITS:1 COG:SPy0867 KEGG:ns NR:ns ## COG: SPy0867 COG0488 # Protein_GI_number: 15674895 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 532 1 531 625 785 80.0 0 MSDFIVEKLTKSVGDKTVFKEISFIIHDLDRIGIIGVNGTGKTTLLDVVSERIGFDGDVS PFTKANGYKIAYLTQEPEFDDSKTVLDTVLSSDLREMTLIREYETLMADYSEDNQSRLEK VMAEMDSLDAWSIESEVKTVLSKLGLSDLSQKVGDLSGGLRRRVQLAQVLLNDADLLLLD EPTNHLDIDTIAWLTNFLKSSKKTVLFITHDRYFLDNVATRIFELDQANLIEYQGNYQDY VRLKAEQDERDAAALHKKKQLYKQELAWMRTQPQARATKQQARINRFKDLKGEVHQTVNN DDLEINFETSRIGKKVVNFGHVDFAYEDGKQILSDFNLIMQNRDRIGIVGDNGVGKSTLL NLINGDLVPSAGIIDIGETVRIGYFSQQIKDMDESKRVINYLQEVADEVKTTVGTTSITE LLEQFLFPRSTHGTQIAKLSGGEKKRLYLLKILIEKPNVLLLDEPTNDLDIATLTVLENF LNGFGGPVVTVSHDRYFLDKVANKILAFEDGGVREFFGNYTDYLDEKAFLQEQSALLERE KSKLALKLRKSKKTKNA >gi|311100154|gb|AEKO01000011.1| GENE 63 58623 - 58832 376 69 aa, chain + ## HITS:1 COG:SPy0867 KEGG:ns NR:ns ## COG: SPy0867 COG0488 # Protein_GI_number: 15674895 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pyogenes M1 GAS # 1 68 557 624 625 79 64.0 2e-15 MSYFEKQEWATIEDEIADLEAKIEEIEAAMLENASDYGQLATLQRDLESANETLLEKYER YEYLSELEG >gi|311100154|gb|AEKO01000011.1| GENE 64 58914 - 59417 466 167 aa, chain - ## HITS:1 COG:no KEGG:stu0427 NR:ns ## KEGG: stu0427 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 167 1 167 167 202 91.0 5e-51 MKSFTLISGILITLLGVFFFANPTNLLAIVGWLFALVMLISGVSSLMVYFKRDNENRSFF QLLQSIISIVFGIILLSTSAWVLSGVAVTIIAWWLLVSAFTQGFQAYRQRQFGFSGQPAL SIALICLVFGLLLFSAPFFSAFLIGRLVASLIIFAGVSVLSFSFRLW >gi|311100154|gb|AEKO01000011.1| GENE 65 59486 - 60247 502 253 aa, chain - ## HITS:1 COG:CAC1777 KEGG:ns NR:ns ## COG: CAC1777 COG1051 # Protein_GI_number: 15895053 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Clostridium acetobutylicum # 1 248 4 296 307 114 31.0 1e-25 MSKTFENSGIEKDFLEIYSREEVDKYAKPSVTVDSVIFRYFEGRVQTLLIKRKNHPYMGK YALSGGFVQEQEDLNTAVCREVREETSVQLNTDHIEQLVTVGTPYRDPRMWTITIAYLCF MTFNDIQMDKAADDAASTHWLDIAMVNGKLQLTDGDKTLSHDDLAFDHWEILLIAMERIK GRLEYYPTILNIMPEESTLTTYRQLFGTFNETYLKMDSTNFLRRFKHLFQKTGRQVATRT KKAATYTYQIPPI >gi|311100154|gb|AEKO01000011.1| GENE 66 60311 - 61417 1055 368 aa, chain - ## HITS:1 COG:L0242_1 KEGG:ns NR:ns ## COG: L0242_1 COG1056 # Protein_GI_number: 15673969 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide adenylyltransferase # Organism: Lactococcus lactis # 1 170 6 178 178 160 48.0 3e-39 MKRKHLSGKSIGIVFGTFAPMHVGHVDLITKAKRANDNVLVIVSGGNTQKDRGTRTGLSL NRRFRYVREVFYNDELVVVDKLDEADMPPYPEGWVLWVSRVKELITKNTDSSEKITFYVG EPEYVIELNRYYPQAQVELIERSIINISATEIRDNPMENWRFITKPFRRHFTRKILVVGS ASGGKTTLVKDLARTYNAPCSLEYAREYQEKYNVRDDELDTNDYIHLLTDQYAQTAEIID NGQHSGLIFADTNSTVTKVYIDYYLKENISQEEFDMLDRLYQVTQAREKWDLIFVIPPKS NYVDDGFRDMTMADNRTRDWFTKHLLNLLSPFKDKIVILGENSDSDSFFADNYHYAKKAI KERLHIEI >gi|311100154|gb|AEKO01000011.1| GENE 67 61763 - 63115 1577 450 aa, chain + ## HITS:1 COG:lin0569 KEGG:ns NR:ns ## COG: lin0569 COG0334 # Protein_GI_number: 16799644 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Listeria innocua # 4 450 14 458 458 588 68.0 1e-168 MTTGKEYVASVFEKVKAQNGHEAEFLQAVEEVFDSLVPVFDKYPKYIEENLLERLVEPER IVSFRVPWVDDKGQVQVNRGFRVQFSSAIGPYKGGLRFHPSVNQSIIKFLGFEQIFKNSL TGQPIGGGKGGSNFDPKGKSDNEIMRFCQSFMTELSKHIGADTDVPAGDIGVGGREIGYL YGQYKRLRNEYTGVLTGKGLNWGGSLARTEATGYGAVYFAEQMLNARGENFNGKTAVVSG AGNVAIYAIEKLQSLGAKAVTCSDSSGFVYDPDGIDVDLLKEIKEVKRERIVKYAEARPN ATFTPAGGEKTVWSVKADLAFPCATQNELDETDAETLVANGVLAVSEGANMPSTLGAIDV FLKAGVSFGPAKAANAGGVAVSALEMAQNSGRTSWTFEEVDAKLYDIMKGIYENAAAAAK EFGHEGNLVVGANIAGFLKVADAMSAQGIV >gi|311100154|gb|AEKO01000011.1| GENE 68 63253 - 63663 425 136 aa, chain + ## HITS:1 COG:SPy0870 KEGG:ns NR:ns ## COG: SPy0870 COG0242 # Protein_GI_number: 15674896 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pyogenes M1 GAS # 1 136 1 136 136 172 58.0 1e-43 MIKTIVKDVFFLGQKSTEATKEDLYLAKDLRDTLEFHKDACVGMAANMIGVKKRVIIVNI GFVNLVMFNPVLVSKSSLFQTEESCLSLEGSRPTRRYESIEVAYLDEQWMLKQLNFSGMP AQIIQHELDHLEGIII >gi|311100154|gb|AEKO01000011.1| GENE 69 63851 - 64294 329 147 aa, chain + ## HITS:1 COG:SP1920 KEGG:ns NR:ns ## COG: SP1920 COG1846 # Protein_GI_number: 15901744 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 6 146 4 146 149 87 40.0 6e-18 MHGKDPFSEFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKR LSISKSVASNLVKRMEKNGFVELVTSDKDKRYKYVHLTDLGEKKAQDVGYFREAIHEQLL DGISKEDAETAFRVFHQIRMNLEKNKE >gi|311100154|gb|AEKO01000011.1| GENE 70 64298 - 66112 205 604 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 357 583 132 354 398 83 30 6e-15 MFKIFKRLTTKELIMIVLAVIFVCLNVYLNLKIPDYMSDITILLSTKGTKASDIFAWNTD APGMRMLLMSFAGFMASVVVGFLAARTAASFTTRLRDDIFHQVLDFSDAEIKKFSIPSLL TRTTNDITQLQMVLTMGLQVITQGPIMAIWAITKIADKNGNWLLALLVAVAVIAILMLFL LIMVMPKQRLIQTLTDKLNSVTRESLTGIRVVRAYNAESYQEDKFEKANTDLTQNNLFIG RSFALLTPVMTAVSSGLTLAIYWIGAHLIEDVKIPTDPTKIAGAMENKVHLFSDMVVYSS YAMQVVMGFMMMIVVFFLLPRAVVAAGRINEVLDTQSSVSYPENSSEKPKEVGTVEFDDV SFRYSETSEPVLEHVSFKAKKGDTVAFIGSTGSGKSTLVNLIPRFYDATQGTIKVDGVDV RHYDHETLHNIVGYIPQKAVLFSGDITSNMTMGTSNNSPLDDSKIWEALELAQGKDFVEN KEGQLKAEVAQAGSNFSGGQKQRLAITRALARKPEILIFDDSFSALDYKTDRKLRQELAE KTQDLTKLIVAQRISTIMDADQILVLDQGKVVGQGTHKELLANNEVYQEIAYSQLSKEEL ENGK >gi|311100154|gb|AEKO01000011.1| GENE 71 66102 - 67880 180 592 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 368 574 38 251 329 73 27 5e-12 MENKPKTSSYKRLKPYIKGFQIPFVLAIFGAIISAVITVIGPDKLKEITNTITEGITPTK MGTIPGIDLDKVASIAMTLAVLYVISAIVGYLQSFTVATVTQRFSQRFRTAIQKKINSVP LNYFDSHSQGDTLSRVTNDVDLLGQSLSQGLGTLITSSILLVAAIIMMFYSNVTMAFTAI GSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASKESSQAFKG LNDKLYKSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAIKVIDGSLTIGDVVAFMTYVR IFSQPLSQIAQGITQLQSSIAAIGRIFEFLEEKDMDDESAKTAELTDTKGQVVFDHVSFG YTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMKFYNIDQGRITIDGVNTNDMK RETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIAAAKAVGVHHFITTLPKGYDT YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSF VIAHRLSTIRNANLILVMKDGNIIEQGNHDELMAAEGFYADLYNSQFTEEVA >gi|311100154|gb|AEKO01000011.1| GENE 72 68232 - 68396 75 54 aa, chain + ## HITS:1 COG:no KEGG:STER_0472 NR:ns ## KEGG: STER_0472 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 53 55 107 110 92 86.0 6e-18 MLKNLQNGATKLFRFISITRLFKYFNFVEESERHLEDSAEYDWYLMMLTVTPEE >gi|311100154|gb|AEKO01000011.1| GENE 73 68630 - 69253 545 207 aa, chain + ## HITS:1 COG:SPy0873 KEGG:ns NR:ns ## COG: SPy0873 COG2357 # Protein_GI_number: 15674898 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 2 204 9 211 216 308 75.0 3e-84 MSTPSIYGEYAQYLPKILQEITDPIIAANITSKKETGFKLYEHFISRIKESDSMREKCRR KNLPETSRSALKEIRDSIGIRIVCGFVDDIYKTIDVIKAIPDVSIYNEKDYILNAKPNGY RSYHLILQMETDFPDVLGNDKGTYFVEVQLRTIAQDSWASLEHQMKYKHDIKNPEMITRE LKRCADELASCDLTMQTIRNLIQEGGD >gi|311100154|gb|AEKO01000011.1| GENE 74 69255 - 69932 645 225 aa, chain + ## HITS:1 COG:SPy0874 KEGG:ns NR:ns ## COG: SPy0874 COG0745 # Protein_GI_number: 15674899 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 3 224 1 221 222 280 67.0 1e-75 MALKILLAEDEEALSRVYKAALEHQGYEVDQAFNGQEAVDLAAQNAYQVMIMDIMMPIKT GIEALKEIRSSGDRTHVIMLTAMAEIDDRVTGLDAGADDYLTKPISLKELLARLRSLERR VSETFTAKILTLGSVRLDQEEQELVAGNAIRLSSRETKLMAHFMLNPAKKLTTDHLFKTI WDDEEDVDESIVWVYISYLRQKLQAIQADISILGEKGGDFCLLQD >gi|311100154|gb|AEKO01000011.1| GENE 75 69945 - 71168 697 407 aa, chain + ## HITS:1 COG:SPy0875 KEGG:ns NR:ns ## COG: SPy0875 COG0642 # Protein_GI_number: 15674900 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pyogenes M1 GAS # 1 407 1 410 410 438 56.0 1e-122 MFRRLRLQFIMITSLAILFILIFTVGIINTVRSFQTEQEISKVLNILTENNGSFGKIKKI ETNQGREIPSDSFRFFSLTLSDDKVVSQDTSHTSLINDEEAARYALTVSRLTNNLGTIRE KNINLSYQVSKVSRDKILVVFLDTSSYYNSSQALFSLSILLSLFAFIFFVVIVSALSGIV IRPFIRNYEKQRRFITNAGHELKTPLAIISANTELQELMTGENEWTKSTNDQVARLTNLV NSLVALSRLEEQPDMVLQDVDFSYITEDAAEDFKGPVVRDGKSFVMDIAPDIHVKAEEKS LFELVTLLVDNANKYCDPEGTVTVRLRQIGRTRKRARLEVSNTYKEGKEVDYSKFFERFY RIDESHNNKEHSGFGIGLSMAQSMVKLFKGRIFTSYKNDTITFTVIL >gi|311100154|gb|AEKO01000011.1| GENE 76 71386 - 72123 1113 245 aa, chain + ## HITS:1 COG:SPy0462 KEGG:ns NR:ns ## COG: SPy0462 COG0528 # Protein_GI_number: 15674581 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Streptococcus pyogenes M1 GAS # 2 240 1 239 242 403 88.0 1e-112 MVEPKYKRVLIKLSGEALAGERGVGIDLPTVQTMAKEIAEVAESGVQIALVIGGGNLWRG EPAAEAGMDRVQADYTGMLGTVMNALVMADSLKQLGVDTRVQTAIDMKSVAEPYIRGRAL RHLEKGRIVIFAAGIGSPYFSTDTTAALRAAEIEADAILMAKNGVDGVYNDDPRKNADAV KFDELTHVEVIKRGLKIMDATASTLSMDNDIDLVVFNMNEPGNIKRVIFGEHIGTTVSNK AELHK >gi|311100154|gb|AEKO01000011.1| GENE 77 72138 - 72695 866 185 aa, chain + ## HITS:1 COG:SPy0463 KEGG:ns NR:ns ## COG: SPy0463 COG0233 # Protein_GI_number: 15674582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Streptococcus pyogenes M1 GAS # 1 185 1 185 185 256 87.0 2e-68 MTNAIIEKAKERFAHSHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVP EARVLLISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKV GENAKIAIRNIRRDAMDEAKKQEKDKEITEDQLKALEKDIQKATDDAVKKIDSMTAEKEK ELLTV >gi|311100154|gb|AEKO01000011.1| GENE 78 72786 - 73643 984 285 aa, chain + ## HITS:1 COG:SPy0464 KEGG:ns NR:ns ## COG: SPy0464 COG2996 # Protein_GI_number: 15674583 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 285 1 285 285 484 82.0 1e-137 MNTLLGTIITALVTDENDKFYFVQKDGVTFALSKDEGEHAIGDMVIGFAYTDSKQKSRLT QKEIKATRDSYDWGEVTEVRKDLGVFVDVGIPDKEIVVSLDVLPELKELWPKKGDKLYIK LDVDKKDRIWGLPAEPEVFQRIAGPAYDNMQNQKWPAIAYRLKLSGTFVYLPENNMLGFI HPSERYAEPRLGQVLEARVIGFREVDRTLNLSLKPRSFEMLENDSQMILTYLESNGGFMT LNDKSSPADIKATFGISKGQFKKALGGLMKAKKIKQDQFGTELIG >gi|311100154|gb|AEKO01000011.1| GENE 79 73652 - 73867 265 71 aa, chain + ## HITS:1 COG:SPy0467 KEGG:ns NR:ns ## COG: SPy0467 COG4479 # Protein_GI_number: 15674585 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 71 1 71 71 122 88.0 2e-28 MRKSFYTWLMTQRNPKSNEPVAILADLAFEDSTFPKHTDDFEEVSRYLEDQASFSFNLGQ FDQIWEDYLAH >gi|311100154|gb|AEKO01000011.1| GENE 80 74105 - 75352 1687 415 aa, chain + ## HITS:1 COG:no KEGG:stu0442 NR:ns ## KEGG: stu0442 # Name: pcsB # Def: glucan-binding protein B, putative # Organism: S.thermophilus_LMG # Pathway: not_defined # 1 311 1 348 482 253 66.0 1e-65 MLSKSKTTKALLYSTAALSLFAASHVHADEASNWTARSVDQIKADISVNDNQQTYTVQYG DTLGSIAEAMGIDVNVLANINQITNIDLIYPGTVLTATYNSDNQAVSVKVETPASETSTT PVVAEANLTTNEVTVNGQSVVVADLTAPVETVSTTATQVPATEASTQAVSEVTEAIASVS EAPAYAETEQPVADAIDHVTASAETTPAAETPAQPEVKEEAPAATSEASSEAPATSEAPA EQPVAEPAATSEAASEAPAASEAPAEQPVVEPAATSEVASEAPAASEAPAAQPASTNTLP TDPHLQPQAEAFRQDVAAKFGLTDIGGYREGDPQDHGKGLAVDVMVPVGSEVGNQVAQYA VDNIANAGISYVIYRQKFYAPVNNIYGPANTWNQMPDRGSVTENHYDHVHVSFNA >gi|311100154|gb|AEKO01000011.1| GENE 81 75432 - 76490 1141 352 aa, chain + ## HITS:1 COG:SPy0471 KEGG:ns NR:ns ## COG: SPy0471 COG1702 # Protein_GI_number: 15674588 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Streptococcus pyogenes M1 GAS # 1 348 1 349 350 545 81.0 1e-155 MQEYSVEITLNHPDDVLSLFGTNERHLKLIEENLNIIIHARTERVQVLGDDEESVELARL TIQALLVLVERGMLVNTSDVVTALTMAQDGSIDKFVALYEEEIIKDNSGKPIRVKTLGQK VYVDSIKSHDVVFGIGPAGTGKTFLAVTLAVTALKRGQVKRIVLTRPAVEAGESLGFLPG DLKEKVDPYLRPVYDALYQILGKEQTTRLMEREIIEIAPLAYMRGRTLEDAFVILDEAQN TTIMQMKMFLTRLGFNSKMIVNGDMSQIDLPRRVKSGLIDAMEKLKGIKAIDFVHFTASD VVRHPVVADIINAYEKDAPKVDFEAKPEQSNEVEEASGLTEYPVIGVEDVKK >gi|311100154|gb|AEKO01000011.1| GENE 82 76768 - 77016 117 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477914|ref|ZP_04062528.1| ## NR: gi|228477914|ref|ZP_04062528.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 81 81 161 232 127 82.0 2e-28 MKCQFYYLSYRDGEPFVLLFEHDEKLPQTFDPHTGTLKQDSTVSEYKALVISHIDKLSKK GEEYSRVKEVSVRRCVDVYKKC >gi|311100154|gb|AEKO01000011.1| GENE 83 77010 - 77192 177 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477914|ref|ZP_04062528.1| ## NR: gi|228477914|ref|ZP_04062528.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 1 58 162 219 232 85 74.0 7e-16 MLTQKRTYEKRPNAIVLIVYANDGHIESRRTFKRLTSEEVKGLISGYEWDYKYALDHHKD >gi|311100154|gb|AEKO01000011.1| GENE 84 77379 - 78419 847 346 aa, chain + ## HITS:1 COG:no KEGG:stu0448 NR:ns ## KEGG: stu0448 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMG # Pathway: not_defined # 149 280 6 137 137 131 56.0 3e-29 MNQQEWIEYFELVNGRKPTPAELSQAQATGEFILERPNVLSSNGQMREQRPIKPAEPVIA MTQQPQFAQTVATFQQVVPPKKGMSKKTKIILASFLGSLVAISLIVGGYSLWRYQSGKIA DGTYEVVAYSYRDDDKDKMVDGINEYKDEDLDLQSFVVVKNNQSRTYNLVEGDNKSYVSL MDYEIDIPQIFDPWNKTQSQALNADQVEDITKDFMKKMRKDYSFYTKEAADKVVKKTTRE YKDTLREKRTYVKHGDEYTLTTYGEKGKLESRITFKRLSKSDTDKRWNDYEDAVKDYKKE LKSYSDQYDNYKDYFDYGYGYSDDYGSDSKSSSSGSSSSKKSVDRI >gi|311100154|gb|AEKO01000011.1| GENE 85 78328 - 78690 207 120 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477892|ref|ZP_04062506.1| ## NR: gi|228477892|ref|ZP_04062506.1| conserved hypothetical protein [Streptococcus salivarius SK126] # 69 119 1 51 292 75 72.0 9e-13 MVMAIVTTMVAIQNQALVVAVAVKRALIEFNIHKFNKAVSGLKSGTVFSFYENGQIDFWH FSAKIGVSMKKGTFMNETEWLDYFETINNCKLIEEEIQQSKANSEFIASEPVAENSQPQV >gi|311100154|gb|AEKO01000011.1| GENE 86 78715 - 78954 120 79 aa, chain + ## HITS:1 COG:no KEGG:STER_0484 NR:ns ## KEGG: STER_0484 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 7 59 91 143 145 64 83.0 1e-09 MTPVVASKKVYIKTYKEFLKETVHYKVNADKINVLTYDKKGKLSEEKVFKGLTKEEKKLD YDYERDDRDDKKLSFLGEY >gi|311100154|gb|AEKO01000011.1| GENE 87 79063 - 81066 2270 667 aa, chain + ## HITS:1 COG:SP0788_1 KEGG:ns NR:ns ## COG: SP0788_1 COG0143 # Protein_GI_number: 15900681 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 3 545 4 543 543 920 81.0 0 MTKTFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRMMNYDVFYLTGLDEHGQKIQQKA EEAGITPQEYVDGMAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLG EYSGWYSVSDEEFFTESQLAEVYRDEQGNVIGGIAPSGHEVELVSEESYFFKLSNYADRL TAFFKEHPEFIQPDGRMNEMLKNFIEPGLEDLAVSRTTFTWGVKVPSDPKHVVYVWIDAL INYITALGYGQDEHGNFDLFWQNDENHEIIHMIGKDILRFHSIYWPIILMALDLPLPTRL VAHGWFVMKDGKMSKSKGNVIYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVARI NYELANDLGNLLNRTVAMINKYFGGQVPVYVENVTDFDADLAKVVAENIEEFHKQMNAVD FPRALDAVWNIISRTNKYIDETAPWVLAKEDGDKEQLAAVMAHLAASLRVVAHLVQPFMM TTSNAIMEQLGLPVVFDLENLELSGFPENVTVVSKGTPIFPRLDMDEEIAYIQSQMNAGK PQEKEWNPEEIELKSEKDQIKFEDFDKVEIRVAEVKEVEKVEGSDKLLRFRLDAGDGEDR QILSGIAKFYPNEQELVGKKLQVVANLKPRKMMKKYVSQGMILSAEHDGKLTVLTVDPSV PNGSVIG >gi|311100154|gb|AEKO01000011.1| GENE 88 81345 - 82241 686 298 aa, chain - ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 288 1 292 301 176 35.0 6e-44 MNFQQCRYVQTISETGSFSKAAKKLFLTQPNLSASIRDLEEELGVLLFERSNTGAKLTDD GHDFLKYAKRILGELDLLEGRYRKSFKKSFTIASHHYDFLSLPMAHIAKRFRSDYQEFQL IETTTRKILKSVESFESDLGIIYLDEDNVHILERSFKHMDLTFTPLGDFETKIFLGRQHP LAKKKSLNLKDLEGYPQVRFRQESSGIHFDEDPLEVLPDQQVIYSNDRGSVMNLLCSSDS YASGLGIVNSFIKDQIVLIPLKDSPKHTLGFVTNNKQKQSTIIQAFIEEIRDSLLPHH >gi|311100154|gb|AEKO01000011.1| GENE 89 83551 - 84510 505 319 aa, chain + ## HITS:1 COG:SPy1395 KEGG:ns NR:ns ## COG: SPy1395 COG4469 # Protein_GI_number: 15675318 # Func_class: R General function prediction only # Function: Competence protein # Organism: Streptococcus pyogenes M1 GAS # 1 317 4 319 320 295 49.0 1e-79 MLIAKNTEGKLVSALETSLQRKEPYSCPGCQGVVLLRPGQVMCPHFAHKSLQDCQFFSEN ESAQHLSLKAALYKSLVNHGEKVSIEKVLFEMGQIADLFVGDSLALEVQCSRLSQQRLRE RTCAYHQAGYEVRWLLGEELWLNGRLTDLQRDFLYFTAKIGFHLWELDWKREEIRLKYLI YEDIFGKVYYLTKAWPLTENLMTVLRFPYQVEKGETYKVTQRKKVSHVIQRELMGKNPRW LRRQEEAYLKGMNLLCLSDQDFFPQVRFPESKQGFVQIRLSIDDFKKLFMQYYRKRHFSY KQTLYPPTFYAKIVKNRHN >gi|311100154|gb|AEKO01000011.1| GENE 90 84521 - 86326 2041 601 aa, chain + ## HITS:1 COG:SPy1393 KEGG:ns NR:ns ## COG: SPy1393 COG1164 # Protein_GI_number: 15675317 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Streptococcus pyogenes M1 GAS # 1 601 1 601 601 803 70.0 0 MSDNRTHLDEKYTWDLTTIFATDADWETEYESTVQDLKKVSAYAGHLLDSAKNLLEATEL YMSLMRRLEKIYVYASMKNDQDTTVGLYQEYQAKASNLYSQLSGAFAYFEPEFMALDAKK LAEFKEQEPGLGLYDHYFERLLANKDHVLSQEAEELLAAAGDIFNGPTDTFNVLDNADIL FPWVSDGQGDVIELTHGNFITLMESKDRDIRKGAYEAMYGTYEQFQHTYAQTLQGVVKVH NYQAKVRHYNSARHAALAANFIPESVYDSLLESVNKHLPLLHRYLDLRKKVLGLDELKMY DVYTPLSETETALTYEESLKKAEEVLAIFGEEYSKGVHAAFTERWIDVHPNKGKRSGAYS GGAYDTNAFMLLNWQDTLDNLFTLVHETGHSLHSTFTRQTQPYVYGDYPIFLAEIASTTN ENILTETLLKEVKDDKTRFAILNHYLDGFKGTVFRQTQFAEFEHAIHEADASGQILTAEF MNKIYADLNEKYYNLKAEDNYEIQFEWERIPHFYMNYYVYQYATGFAAASYLAEKIVHGT EEDKEAYLTYLKAGSSDYPLEVIKKAGVDMTNTDYLDAAFKVFEDRLVELEALVEKGVHL S >gi|311100154|gb|AEKO01000011.1| GENE 91 86595 - 87776 1056 393 aa, chain + ## HITS:1 COG:SPy1392 KEGG:ns NR:ns ## COG: SPy1392 COG0477 # Protein_GI_number: 15675316 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pyogenes M1 GAS # 1 381 19 398 398 475 68.0 1e-134 MLGSTYAWSIYRNPIMVQTGWDQSSVSFAFSLAIFCLGLSAAFMGRLVEKFGPRVTGSMS AVLYAGGNILTGVAIAQGELWILYLGYGILGGLGLGVGYITPVSTIIKWFPDKRGLATGL AIMGFGFASLLTSPIAQYLIQARGVEQTFYILGVVYFIVMLFVSQFIKRPSVEEAQLLAD KSPNRQAADLSKGITANEALKSSTFYWLWLILFINISCGLALVSAISPMAQDMAGMSAES AAVVVGVMGIFNGFGRLLWAGLSDYIGRPKTFILLFVVNIVMAILLIVLQVPLVFVVAMA VLMTCYGAGFSLIPPYLSDIFGAKELATLHGYILTAWAMAALVGPMLLSVTYELTKSYQM TLLVFIALYVVALVIAYLLKKKVIRQSSLMMRI >gi|311100154|gb|AEKO01000011.1| GENE 92 87834 - 88541 834 235 aa, chain + ## HITS:1 COG:SP0980 KEGG:ns NR:ns ## COG: SP0980 COG4122 # Protein_GI_number: 15900857 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 235 1 235 237 355 75.0 4e-98 MVKSYSKNANHNMRRPVVNKDIVDYMRTHLQENKGHLAELEAFARKENIPIIQHEVVAYF RFLLQTLQPKKILEVGTAIGFSALLMAEYAPDAQITTVDRNEEMIGFAKENLAKCDSRKQ ITLVEGDAAEVLQDLDTDYDFVFMDSAKSKYIVFLPEILKRLKVGGVIVFDDIFQGGDIA KDIMEVRRGQRTIYRGLHRLFDATLDNPGLTASLVPMSDGLLMLRKNSENIILPD >gi|311100154|gb|AEKO01000011.1| GENE 93 88603 - 89745 1502 380 aa, chain + ## HITS:1 COG:SPy1390 KEGG:ns NR:ns ## COG: SPy1390 COG0760 # Protein_GI_number: 15675314 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Streptococcus pyogenes M1 GAS # 80 365 10 298 351 171 41.0 3e-42 MAKENENLESTEETVEEVVADKDAEQEHLDRQKEEEESIALASEKAKEKAKRAKTKKTRD AGKPSSGGRFLGGLALVAVSALVGAGAMYVSLGNKTTEETTLVSMKGDTVTVGDVFDSLK GSNQTQQSVLSATLQKALEKEYGSKVSKEDVDKAYKKSLEQYGDQFSQVLAAYGQTEESY RTQIRTQKLVEYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVDSEAKA EGADFSQVAKDNSLEVTSKTVNSASQDFPTDVLTAAFKQDANAVSDVVTVSNSSTGAATY YIVKTVSKSEKNADWKNYKDDLTKVIINGKKADTNFTNSVIAKVLKKYNVKVVDKAFSAI LDQYATGSGASSSSTSSSSK >gi|311100154|gb|AEKO01000011.1| GENE 94 90087 - 92705 3553 872 aa, chain + ## HITS:1 COG:SPy1389 KEGG:ns NR:ns ## COG: SPy1389 COG0013 # Protein_GI_number: 15675313 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 1 870 1 870 872 1459 83.0 0 MKQLTSAQIRQMWLDFWKSKGHAVEPSANLVPVNDPTLLWINSGVATLKKYFDGSVIPEN PRITNSQKAIRTNDIENVGKTARHHTMFEMLGNFSVGDYFRDEAIEWGYELLTSPEWFDF PKDKLYMTYYPDDKDSYNRWIACGVEPSHLIPIEDNFWEIGAGPSGPDTEIFFDRGEDFD PDNIGIRLLEEDIENDRYIEIWNIVLSQFNADPAVPRSEYKELPNKNIDTGAGLERLVAV MQGAKTNFETDLFMPIIREIEKMSGKTYDPDGDTMSFKVIADHIRSLAFAIGDGALPGNE GRGYVLRRLLRRAVMHGRRLGISDAFLYKLVPTVGQIMESYYPEVLEKKDFIEKIVKREE ETFARTIDAGSSMLDELLANLKKSGKGTLEGKDIFKLYDTYGFPVELTEELAEDEGFKID HEGFKAAMKEQQERARASVVKGGSMGMQNETLANITEPSEFLYEAETAESHLSVIVADDA RHDSVNSGQALLVFEQTPFYAEMGGQVADHGTISDAAGTVVARVVDVQRAPNGQALHTVE VEGELVVGANYKLEIDHTRRHRVMKNHTATHLLHAALHNIVGDHAVQAGSLNEQEFLRFD FTHFEAVTPEELRAIEEQVNEEIWKATPVTTIETDIDTAKSMGAMALFGEKYGKNVRVVS IGDYSVELCGGTHVANTAEIGMFKIVKEEGIGSGTRRILAVTSREAYLAYREEEDALKAI AATLKAPQLKEVPNKVASLQEQLHALQKENAALKEKAAAAAAGDVFKDVKEANGVRYIAS QVEVSDAGALRTFADQWKQADYSDVLVLAAHIGEKVNVLVASKSKGVHAGNVIKVLAPIV SGRGGGKPDMAMAGGSDANGIQDLLLAVAEQF >gi|311100154|gb|AEKO01000011.1| GENE 95 92880 - 95462 2532 860 aa, chain + ## HITS:1 COG:SPy0031 KEGG:ns NR:ns ## COG: SPy0031 COG3942 # Protein_GI_number: 15674273 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 707 805 181 281 374 86 46.0 2e-16 MRKAYVFKERQCYSIRKYSFGAASVLIGASLMLGGHALAQEQANSVNSNKDNEVIVNNSE ALQIDQATSEAVIDVLNQPASRSEAPRPKLVSSEVASSEVSSVVVSEAASLEVPAEVAQS ASAVASVASSEVASPRSEVSLVASSEAASETDRSATSEVAEARPTDREAVDTSLRTVLTN ASQPGVDGPVTADGSLDIPSNGTFYFRRTTEIRTAPIMDIKPTFVFSAGDHVIYDKVLKR DSHQWISYIGYDSERYYADIATLKAESTSSTTEVTRDETIPERGTYYFTKPADVKNQPSL TAKTEFNFDSGMSVNYDRSLLADNHRWISYTSYSGTRRYVDLGAVAEAVAKPRGDISIES HNNGDFSVVISNVSDQNGVLGVSVPIWSEKNGQDDIIWYNATRLSNGNYKVNVSLSDHKN ERGLYNVHLYYVETNGKLVGVGGTTYTVPAKVEETHTTTSHSLPDSGTYAFKERSSIKAE PRVASPELAYYDAGMSVNYDKIVSGDGYQWLSYLSYNGNRRYVAVAKLAQRESKPSGTIT IENLSNLGFDVHITNVSSGDKAIQGVSVPVWTAKNGQDDLVWYQADRQSDGSYKVRINLT DHKAEAGEYIVHLYYVQDGKMVGIGGTSTTVPVQSATRHNLPASGSYTFTARTGIKTQPL VANPDVSYYDAGMSVNYDKVVNNDGYTWLSYLSYSGHRFYVAIAPTSVTKPVEQPVQPNT SSSGTYTFKERSSIKAEPSMASPELAYYDAGMSVNYDKLVTADGHTWLSYVSYGGNRRYI AIDGKVTAVAQPASPSLAATGTYTFTKPSSIKAQPSVASPELAYYDKGMSVRYDKVLTAD GHTWLSYVTYSGARRYVDIS >gi|311100154|gb|AEKO01000011.1| GENE 96 95696 - 96349 505 217 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|228477879|ref|ZP_04062493.1| ## NR: gi|228477879|ref|ZP_04062493.1| hypothetical protein STRSA0001_0590 [Streptococcus salivarius SK126] # 1 151 1 139 185 70 46.0 9e-11 MKITSKIIGLVLALIVVILAVFLVTKFNSHESARVSTSSSPVKTVKKSSSSSSKSTKSDK KNSNPHVKNEDTEDATIAVSGSSVAKDSATKDTDETVLSSGGVSETTKEKTGEETQASSS INGKQLSSGDFSSIAGTWTNSRGEFVTISPDGTVQNGRGYTYHLYSGRLNNGNFSGTIAS DGDSAAFWAIPGTGNGDLDHLVIGQSDDAENYPFYRN >gi|311100154|gb|AEKO01000011.1| GENE 97 96617 - 100417 4883 1266 aa, chain + ## HITS:1 COG:SP0629 KEGG:ns NR:ns ## COG: SP0629 COG1876 # Protein_GI_number: 15900536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 841 1022 55 236 238 222 61.0 4e-57 MKREKFLHEQQRFSIRKYSFGAASVLLGASLVFAGQALADEHHEVATTSDATLRATSDSD AVIAADIFSGVATDGVVSSEKVSQVSTISQTTSETATSEATSEVSAGISQAADKTSESTV ASLEAASGTNTSSETATNFDVSALMRAAVNTSLVSQPDTTTASDLPSQGTYVYKERTEIK NQPKVSAKAEFYVNPGDSVFYDQVVTADGYQWISYKSYSGVRRYAPVKPVAAGSGNGNSG NGDGKPSNGAQATTGALDIPATGTFYFTRNTDIKKEPKADLKPTFVFGKGDHVIYDKVLT ADNHQWISYLGYDYVRYYADIATLTPAKAETPSVKPTETNQAKPETTGAEKLPASGTYNV TRSLNVKNEPKASAETLYTLEKGYKVNYDKVLTADNHQWISYISYSGTRRYVDIATLKTT ESKPQENRVSGNLTINNQTSNGFDVVVTNVSGGGKEVQEVRVPIWSDKNGQDDLTWYHAD KQSDGSYKVHVDTASHKGDAGTYSVHLYYMLNGKRTYITETKATVPQSTESQVTGKLTIN NQTSNGFDVVVTNVSGGGKEVKEVRVPIWSDTNGQDDLTWYHADKQSDGSYKVHVDTASH KGDAGTYSVHLYYMLNGKRTYITETKATVPESQVTGKLTINNQTSNGFDVVVTNVSGGGK IVQEVRVPIWSDKNGQDDLTWYHADEQSDGSYKVHVDTASHKCDAGAYSVHLYYMLNGKR TYITETKATVPESQVTGKLTINNQTSNGFDVVVTNVSGGGKTVQEVRVPIWSDKNGQDDL TWYHADKQSDGSYKVHVDTASHKGDAGTYSVHLYYMLNGKRTYITETKATVPESTETKVT GKLTNNGSYYSVHGKYDDIIIVNKKHGLSKDYNPGENPTAKAAFVRLRDDMINQGLNVGR SYSGFRSYNYQKTLYDNYVSRDGQAAADRYSARPGYSEHQTGLVFDLTDKSGNLLEDSRA SQWLKDNAHNYGFIVRFQAGKEASTGYMPEAWHIRYVGKEAKDIHDSGLSLEEYFGIQGG DYATSNKPAESKPATTGAINLPATGTYSFTGRASIKAEAKVSSPELAYYDKGMSVNYDKV LTADGRQWLSYVAASGARRYVDIAAAKAEAKPEVKPVAKPADKPSLPESGRYTFIGRASI KAEAKVSSPELAYYDKGMSVNYDKVLTADGRQWISYVAASGARRYVDIATAKPEVKPVAK PSLPESGRYTFTGRASIKAEAKVSSPELAYYDKGMSVNYDKVLTADGRQWLSYVTASGAR RYVDIA >gi|311100154|gb|AEKO01000011.1| GENE 98 100496 - 101125 307 209 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 208 214 421 422 242 63.0 4e-64 MDMSGAYIPLAKKLFPNAKIVLDRFHIIQHLGRAFLKTRIATMNQFDKKSLPYRALKNHW RLFQKDSCKLSLNSFYSKTFRQTLAPHEVVAKTLGFSKELTDYYTLYQLLLFHFQEKRVD EFFELIEENRSKVNHYFQTVFRTFLRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFG FRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100154|gb|AEKO01000011.1| GENE 99 101167 - 101751 223 194 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 194 1 198 422 234 62.0 9e-62 MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLHLKKRRFQCKSCRRVTVAETSIVEKNCQISNLVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKKHYDKLPAVMSWDEFGFKKGKLAFVAQNYETNELIT ILDNRRQTTIRNYF >gi|311100154|gb|AEKO01000011.1| GENE 100 102041 - 102751 704 236 aa, chain + ## HITS:1 COG:lin0310 KEGG:ns NR:ns ## COG: lin0310 COG0388 # Protein_GI_number: 16799387 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Listeria innocua # 5 235 30 259 259 279 56.0 3e-75 MLERALDDNPDVIVLPEMWNTGYALDELDGLADKDGLDSQELLSHFARKHAVAIIGGSVA IGKDGKFYNTTYVYNKSGDLINSYSKVHLFGLMEEDQYMSPGSSESVFELDGVIAASVIC YDIRFPEWVRTQMAQGAKVLFVVAQWPEPRVQQWEILLKARAVENQAFVVAVNRVGTGPD DVFSGHSMVIDPLGNVVLQSKEHEEGIFTADINLEEVDKVRGQIPVFEDRRTDLYH >gi|311100154|gb|AEKO01000011.1| GENE 101 102761 - 103942 1144 393 aa, chain + ## HITS:1 COG:lin0314 KEGG:ns NR:ns ## COG: lin0314 COG0436 # Protein_GI_number: 16799391 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Listeria innocua # 6 392 4 388 393 471 57.0 1e-132 MLFEESDLLKALPEQFFAGLVAKVNAKVAEGADVINLGQGNPDQPTYDHIVESLCLSAKN PASHKYSQFRGNRPFKEAAASFYEKHYGVNLDAEREICVMGGAKIGLVELPLALMNPGDL LLLPDPGYPDYLSGVSLGRVTYETFPLTAKNDFLPDLDAIPEETARRAKFIYINYPNNPT GAVATKVFYEKLVAWAKTYEVGVVSDLAYGALGYRGYENPSFLSTPGAKDVGIEFYTFSK TFNMAGWRLAFAAGNDQMIEALNLIQDHLFVGIFPALQEAGIAALLDPKSEEAVAQLNAT YDSRRDAFVQAAAKIGWQAFPSRGSFYAWMPVPEGYTSESFADLLLEKAHVAVAPGKGFG PAGDAYVRIGLLVEPERLVEAVNRIANLHLFNN >gi|311100154|gb|AEKO01000011.1| GENE 102 104071 - 105093 1141 340 aa, chain + ## HITS:1 COG:L0104 KEGG:ns NR:ns ## COG: L0104 COG0002 # Protein_GI_number: 15672779 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Lactococcus lactis # 2 338 3 339 340 349 52.0 6e-96 MKISIVGITGYSGLELVKILNNHKKVELVSIHATKEVGRRLSDVYPYLTGVCDLDIEAYD AEKIMKNADLVFFATPSGVASSLAEKFVLADFPIIDLSGDHRLPAGVYQEWYKKSPDKQS VLNKFTYALSEYTDVKDKKFIANPGCYATATELALLPLVATGLIETDSVIVDAKSGLTGA GKALSESSHFVNVHDNYVTYKLNHHQHIPEIVQTLQTFNPEMPEIQFSTSLLPVNRGIMA TVYCKLKKDVDISDVASAFAKAYDDKPFVRVQDSLPELHNVIGSNFTDIGFAYNEKTNVL TVISVIDNLLKGAAGQAVQNLNLMQGWDETEGLLMTPSYL >gi|311100154|gb|AEKO01000011.1| GENE 103 105122 - 106315 1330 397 aa, chain + ## HITS:1 COG:lin1632 KEGG:ns NR:ns ## COG: lin1632 COG1364 # Protein_GI_number: 16800700 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Listeria innocua # 1 397 1 398 398 415 56.0 1e-115 MKVIDGTIASPLGFSADGLHAGFKKRKMDFGWIVSEKPASVAGVYTTNKVIAAPLIVTKT SVKKAGKMKAIVVNSGVANSCTGTQGLEDAYTMQEWTAEKLGVEPDLVGVASTGIIGELL PLDTLKNGLSKLVVNGNADDFAKAILTTDTATKTIAVTETFGRDVVTMAGVAKGSGMIHP NMATMLGFITCDANISSDTLQLALSQNVEKTFNQITVDGDTSTNDMVLVMSNGCTLNEEI LPDTLEFDKFSKMLNFVMQELAKKIAKDGEGANKLIQVDVVNAPNALDARMMAKSVVGSS LVKTAIFGEDPNWGRILAAVGYAGVDVPVDNVDIMIGGLPVMLASSPVAFDDEEMKDVMH VDEVTITVDLHAGHEKGTAWGCDLSYDYVKINALYHT >gi|311100154|gb|AEKO01000011.1| GENE 104 106342 - 107079 729 245 aa, chain + ## HITS:1 COG:lin1631 KEGG:ns NR:ns ## COG: lin1631 COG0548 # Protein_GI_number: 16800699 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Listeria innocua # 6 244 5 244 250 129 35.0 6e-30 MTTEYIVIKIGGVASKQLTPEILAKLSEWHQAGQKIVIVHGGGFAINQLMEAHHIPIHKV NGLRVTGQSDMALIKEALVDIVGKNLAGELTTACLPAYQLVDELPDLVHADFLNQEVYGF VGEVSHITNQTLVALLAQGKIPLIPSLGYSEQGYLLNINADYLARAVAISLGVKKLILMT DVKGVLENGRVLNHLNIVDVQKKIDSGVITGGMIPKIQSAVQTVQAGVEQVIIGDNLTDG TIIKE >gi|311100154|gb|AEKO01000011.1| GENE 105 107083 - 108213 1041 376 aa, chain + ## HITS:1 COG:lin1630 KEGG:ns NR:ns ## COG: lin1630 COG4992 # Protein_GI_number: 16800698 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Listeria innocua # 1 376 1 377 384 372 50.0 1e-103 MTKLFSNYKRAAIDFASAQGNYLTDTTGKTYLDFSSGIGVTNLGYHPHVNQALTEQVGKI LHQPNLYYNQLQEDVADLLIGDKDYLAFFCNSGAEANEAAIKIARKASGKQEIITFQNSF HGRTFGAMSATGQDKIKQGFGEGVPHFSYAIFNDIDSVKALASEETAAIMLELVQGESGV QPANKDFVKALSDFCKETGIYLIVDEVQTGIGRTGKLFAYEHYDIEPDIFTLAKGLANAV PVGAMLAKSSLGAAFSYGSHGSTFGGNKLAMAAAKATLEVMLAPAFLDTALENGNKLQAK LQAALSDKETVTTVRGLGYMIGIETTGNLGELVQAARDKGLIVLTAGTNVIRLLPPIILS DAEIEKGVATLSEIFD >gi|311100154|gb|AEKO01000011.1| GENE 106 108253 - 109131 1001 292 aa, chain - ## HITS:1 COG:SPy1094 KEGG:ns NR:ns ## COG: SPy1094 COG0726 # Protein_GI_number: 15675078 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Streptococcus pyogenes M1 GAS # 49 287 77 318 320 281 60.0 1e-75 MTSQAQKSNKPKQKKMNLLLLVINLVLLGILAVFMLNRPNQSKSNQQQSQTSQSKTAAKW KTYDEPVQIPILMYHAVHVMDPSEASNANLIVAPDNFEAQIKAMVDAGYYFLTPEEAYKA FTENALPAKKVVWLTFDDGNEDFYTIAYPILKKYKAKATNNIITGFVKKGNAGNLTVKQM KEMMAHGMSFQSHTVNHPDLSATDKATQKVELTDSIDFLENKLNTKVNTIAYPSGRYNQT TLDLAKKTYKLGLTTNEGLASSKDGLLSLNRVRILPTTTAKGLLSEITTDNK >gi|311100154|gb|AEKO01000011.1| GENE 107 109306 - 109545 218 79 aa, chain + ## HITS:1 COG:SP1361 KEGG:ns NR:ns ## COG: SP1361 COG0460 # Protein_GI_number: 15901215 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 49 1 49 428 67 63.0 6e-12 MSIKIGLLGFGTVASGIPFLLKENGEKVLEASRDQLEIAKVLVKDDEEKIVLSLLETTII LSQMLMKSLTMTRFKSLSN >gi|311100154|gb|AEKO01000011.1| GENE 108 109545 - 110591 1331 348 aa, chain + ## HITS:1 COG:SP1361 KEGG:ns NR:ns ## COG: SP1361 COG0460 # Protein_GI_number: 15901215 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 346 81 426 428 491 71.0 1e-139 MGRIEPARTFITKALEAGKNVVSANKDLIATHGKDLIALAQDKGVAFYYEAAVAGGIPIL RTLANSLTSDKVTRILGVLNGTSNFMMTKMVDEGWSYEDALKTAQELGYAESDPTNDVEG IDAAYKAVILSQFGFGATIDFDDVSHKGITNISTDDVAVAQELGYVIKLVGDVREVESGI SAEVSPTFLPKNHPLASVNDVMNAVFVESIGIGESMYYGPGAGQKPTATSVLADIIRIAR RLSDGNVGKPFNEFHRDLPLANPADVKSNYYFALDTPDEKGKILHLSEIFNSEDISFEQV LQQKANGTTARIVVITHAMSKTQLQAVTEKLEAAEDFAVVNTLKVLSN >gi|311100154|gb|AEKO01000011.1| GENE 109 110675 - 111535 1033 286 aa, chain + ## HITS:1 COG:SP1360 KEGG:ns NR:ns ## COG: SP1360 COG0083 # Protein_GI_number: 15901214 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 286 1 287 289 360 67.0 3e-99 MKITVPATSANIGPGFDSVGVAVSKYLTIEVLESADAWHIEHDLGDIPSDENNLLISTAL QVKSDLQPHKLVMTSDIPLARGLGSSSSVIVAGIELANQLANLQLSDDDKLDIATKIEGH PDNVAPAIFGNLVVASYVDEHVNSIVTEFPECAFVAFIPSYELKTSDSRGVLPSDLSYKD AVAASSIANVAIAALFAGDLVKAGRAIQGDMFHERYRQKLVKEFATIKELSGQYGAYATY LSGAGPTVMTLTPNDQAEALKTAIDGLGLDGETFILSVDKAGVIVD >gi|311100154|gb|AEKO01000011.1| GENE 110 111528 - 112412 628 294 aa, chain + ## HITS:1 COG:SA2487 KEGG:ns NR:ns ## COG: SA2487 COG2962 # Protein_GI_number: 15928281 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Staphylococcus aureus N315 # 6 292 7 295 302 181 38.0 2e-45 MTRKNQGLLFGFASYIQWGFLSLFWKLLAGVSAYNTFSWRIVFTVVTMLVYALIANQTTR FKGELVGLWQDKKALLRMFLASFLIAANWLIYIYAVGHGQATQASLGYYIMPIVSILFAL VFLRESLSRSMWVAVVLAFIGVLVLVVNTGKLPIISLGLALSFGFYGLIKKGVKLSSDVS MLVESGLLLPFVAIYLIFFSPESFSSYSSLEMFLLAISGIVTAVPLLCFSEAVKRAPLNL IGFIQYLNPTIQLLVAILIFGETVSFGELKGFLFIWVSILVFVTGQILNLRKSS >gi|311100154|gb|AEKO01000011.1| GENE 111 112525 - 113142 801 205 aa, chain + ## HITS:1 COG:no KEGG:STER_0509 NR:ns ## KEGG: STER_0509 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 205 1 205 205 306 92.0 4e-82 MRKIQKLVGYLILLAIPVAIAAALFVFNGSGYRLSEQDAADIAYKNAGVKTSEISQSTVS KSRSGFHGSYEISFTTSDNRFEYTIDGLSGSILKHKSDHPMSKDEDDAQKGEESKDETQA SESKDETAVSKETAQTTALNHAGLTEGSVTNLKTELKTEGDGKVYNISFDYAASGLRYKY AVNADSGAIVAYTTEYLTGATAAAQ >gi|311100154|gb|AEKO01000011.1| GENE 112 113276 - 113479 295 67 aa, chain + ## HITS:1 COG:no KEGG:STER_0510 NR:ns ## KEGG: STER_0510 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 66 1 66 67 68 89.0 8e-11 MKEFQAFKDTLSNTALKAIYEKSKLEAQNETTEGTEAFSVALATQMAINLLESYEQWLEE ERAKEEK >gi|311100154|gb|AEKO01000011.1| GENE 113 113664 - 113924 92 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPSFDSNVDLTFAPTASISLNSPATFGLGSLKAIEKPCHKHDRDEYVSAVPPSFEWQPL TAFLIQFDHQQPALTFVRISQYHRFL >gi|311100154|gb|AEKO01000011.1| GENE 114 113923 - 114510 574 195 aa, chain + ## HITS:1 COG:SP0565 KEGG:ns NR:ns ## COG: SP0565 COG1853 # Protein_GI_number: 15900477 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Streptococcus pneumoniae TIGR4 # 44 192 1 149 149 233 73.0 2e-61 MKQSFETSKLYYGFPIFILGYQDQTYGYNVTTCSSSYSLGDWLVIGVGSEENAADQIKHY QKFTVNIPNESFMLEMEQAGFISHREKIAKLGLDFQSSKLTQAPILDACPVVLDCKVDRI IEEDGICHIFAKILDRLVESDLLDDRGHFKNDCFAPTYFMGDGHKRVYRYLDDRVDPMGS FIKKARKKDDKNSIT >gi|311100154|gb|AEKO01000011.1| GENE 115 114488 - 115057 870 189 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|125718620|ref|YP_001035753.1| ribosomal protein N-acetylase [Streptococcus sanguinis SK36] # 1 184 1 184 187 339 86 5e-92 MTRTVLPDRIETERLVLRVRTVADAEDIYAYASLPEVSYPAGFPPVKTLEDEVYYLEYIL PERNQKDNLPAGYGIVVKGTDKVIGSVDFNHRHEDDVLEIGYTLHPDYWGRGYVPEAARA LIDLGFKDLGLHKIELICFGYNVQSQRVAEKLGFTLEARIRDRKDVQGNRCDSLIYGLLK SEWEVQDQH >gi|311100154|gb|AEKO01000011.1| GENE 116 115087 - 117738 3068 883 aa, chain + ## HITS:1 COG:SP0568 KEGG:ns NR:ns ## COG: SP0568 COG0525 # Protein_GI_number: 15900480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Streptococcus pneumoniae TIGR4 # 1 883 1 883 883 1634 90.0 0 MSKELSPKYNPAEVEAGRYQKWLDEDVFKPSGDKKAKPYSIVIPPPNVTGKLHLGHAWDT TLQDIIIRQKRMQGFDTLWLPGMDHAGIATQAKVEARLAEDGISRYDLGREKFLDKVWEW KDEYASTIKQQWGKMGLSVDYSRERFTLDEGLSKAVRKVFVELYKKGWIYRGEFIINWDP KARTALSDIEVIHKDVEGAFYHMNYMLEDDSRALEVATTRPETMFGDTAVAVNPNDDRYK DLIGKNVILPILNKPIPIVGDEHADPEFGTGVVKITPAHDPNDFLVGQRHNLPQVNVMND DGTMNELAGEFNGMDRFEARKAVVKKLEEIGALVEIEKMTHSVGHSERTGVPVEPRLSTQ WFVKMDQLAKNAIANQDTDDKVDFYPPRFNDTFLQWMENVHDWVISRQLWWGHQIPAWYN AEGEMYVGEEAPEGDGWKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTG YDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIEKYGA DALRWFLSNGSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNKGLTLDVARENVAKV VAGQAGNVTDHWILHNLNETIGKVTENFDKFEFGVAGHILYNFIWDEFADWYVELTKEVL YSDNEDEKVITRSVLLYTLDQILRLLHPIMPFVTEEIYGQISEGTIVTAEYPVIRPEFEN EEAAAGVEALKDVIRSVRNSRAEVNVAPSKPITILIKTSDSKLDAFFNDNVNYIKRFTNP EHLEIAEDVEVPDLVMSSIITGAEIYLPLADLLNVEEELARLEKELAKWQKELDMVGKKL SNERFVANAKPEVVQKERDKQEDYQAKYDATVVRIEEMKKLVK >gi|311100154|gb|AEKO01000011.1| GENE 117 117817 - 119634 560 605 aa, chain + ## HITS:1 COG:no KEGG:Dred_0879 NR:ns ## KEGG: Dred_0879 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 4 356 5 333 515 93 27.0 3e-17 MFDTVVLNPLNINLDFNNPRFSMFDFNTEEEIIRYLIEFEQIKELAFQIGENGYNTIGER IIVLKGRNAGKINYTVLEGNRRIASLKLLFQYSSLLTSSERNKLKQLNLNLSDFEVSCDV VEEDNRDEALFKISAKHIDGIKTWSATDKRVFYHNLYTRYKEKGLSSDKALDNIKIITPE GKVAIRNAIQQLNYLTSVYNATQIYKSDLEKLTHLDTDVLVSRVLRPLVKELKLEFNDEF QVVAKNEKVYHEILGLLGKAVWIDKKLDTRVFSVQRQWNDIVKKDKVIPGLADKIKEYKE SEKTKGSNEESSKNNPISNDTKTTEDSVGDNKEALNLPANDTHENTTNNNDTQNQETKYK FFVPKQSVTIQRENHDLADNIELLDDKNNKVSRQSSEYSKLLISCNHQNIVIRDNIIDSI SENGTYTIDVKYNGQTKHFPICLNVAINNQQQEYQVLFNQQWYDESLSKLSANPKYFKIC GVIRNLQEYNSLSPSNDKYIIIAFLLRALMEYTTKAYIDLFSLKKPADNLSSLITTVKGH LSDKRSLNKEEVKALKNTNDIETLNGLIHDYGTTISSIDIKTTCSKYQKYFSVVFNRLSE GVNNG >gi|311100154|gb|AEKO01000011.1| GENE 118 119627 - 119956 108 109 aa, chain + ## HITS:1 COG:no KEGG:lmo1119 NR:ns ## KEGG: lmo1119 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes # Pathway: Mismatch repair [PATH:lmo03430] # 3 100 2 99 285 122 59.0 5e-27 MDNFSPLRYPGGKNKTYQYVKYLVENNNIDTYIEPFCGGAAVALKLLLNNDVKRIMLNDF DRSIYAMWFSILHDTEAFIKRVREAEFTIEEWDKQQEIQKIKKMLTYLH >gi|311100154|gb|AEKO01000011.1| GENE 119 120049 - 120477 173 142 aa, chain + ## HITS:1 COG:no KEGG:lmo1119 NR:ns ## KEGG: lmo1119 # Name: not_defined # Def: hypothetical protein # Organism: L.monocytogenes # Pathway: Mismatch repair [PATH:lmo03430] # 1 142 142 283 285 121 44.0 1e-26 MNCRYNTEVLVNKIELIAKNKNKIGLYNLDAIKFIKNNIRRTKRSLTFFDPPYFVKGKQL YTNFYEYIDHLELRDTIDKYMGSHKWILTYDFHEEIQNMYSSFEHFPYQLNYSAGSSKKG IEYIFFSEELSSAKINEYLHIL >gi|311100154|gb|AEKO01000011.1| GENE 120 121265 - 121462 338 65 aa, chain + ## HITS:1 COG:SP1514 KEGG:ns NR:ns ## COG: SP1514 COG0636 # Protein_GI_number: 15901361 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Streptococcus pneumoniae TIGR4 # 1 65 1 65 66 64 60.0 4e-11 MNLTILALGLAVMGVSVGEGILVANIAKAAARQPEMFSKLQTLMFTGVAFIEGTFFVLFA LSYIV >gi|311100154|gb|AEKO01000011.1| GENE 121 121497 - 122204 530 235 aa, chain + ## HITS:1 COG:SPy0755 KEGG:ns NR:ns ## COG: SPy0755 COG0356 # Protein_GI_number: 15674803 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Streptococcus pyogenes M1 GAS # 1 234 1 235 238 214 50.0 8e-56 METTSNPTVSLFGIDFDLTILAMSLLTVIIVFGVVFWSSRKMTIKPKGKQNVLEFIYEFV NNTISQKLGKFTKNYSLLLFVIFTFVFTANNLGLLVSVKSEHYNFWSSPTSNFGVTITLS LIITLISHIEGIRKKGLKGYLKGYLSPYPAMLPMNILEQLTNPASLALRLFGNIYSGEVL TGLILQLVTWSAFAAPVSFALNLVWVAFSAFIGFIQAYVFIILSSNYIGDKVNEE >gi|311100154|gb|AEKO01000011.1| GENE 122 122225 - 122722 760 165 aa, chain + ## HITS:1 COG:SP1512 KEGG:ns NR:ns ## COG: SP1512 COG0711 # Protein_GI_number: 15901359 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Streptococcus pneumoniae TIGR4 # 10 165 9 164 164 153 61.0 1e-37 MSLLINSTTLGNIIITLGSVFLLYYLIRKFAWDQITGIFAAREKKIATDIDSAENARQEA ESLAQKRQDELAGARTEAAQIIDGAKETGKTQESKIIAEAHDEAKRLKEKANQDIAQSRV EALAGVKGEVADLTVLLAEKVMKQNLDAKAQSDLIDSYLDQLGDA >gi|311100154|gb|AEKO01000011.1| GENE 123 122722 - 123258 476 178 aa, chain + ## HITS:1 COG:SPy0757 KEGG:ns NR:ns ## COG: SPy0757 COG0712 # Protein_GI_number: 15674805 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Streptococcus pyogenes M1 GAS # 1 178 1 178 178 147 51.0 1e-35 MDKKTQALVEQYARSLVEVAFEQDAVSTIQEEVRQILTVFAETNLKTFLSQENVTSEAKK ESLSLFQESCSVYMNNFLEVISLNDRANILYDVLKLVLELFDQEDNTYDVTVISASPLSE EQKARLLAIVSQKFEIKTRRLVEKIDEDLIGGFVIKAKNKVVDTSIRSQLQTFKTNLK >gi|311100154|gb|AEKO01000011.1| GENE 124 123274 - 124779 1770 501 aa, chain + ## HITS:1 COG:SPy0758 KEGG:ns NR:ns ## COG: SPy0758 COG0056 # Protein_GI_number: 15674806 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 501 1 501 502 926 94.0 0 MAINAQEISALIKKQIENFQPNFDVTETGVVTYIGDGIARARGLDNAMSGELLEFENGAY GMAQNLETNDVGIIILGDFVAIREGDIVKRTGKIMEVPVGEALIGRVVNPLGQPVDGLGD IETTGFRPVETPAPGVMQRKSVSEPLQTGLKAIDALVPIGRGQRELVIGDRQTGKTSVAI DAILNQKGQDMICIYVAIGQKESTVRTQVETLRKHGALDYTIVVTASASQPSPLLYIAPY AGVAMAEEFMYNGKHVLIVYDDLSKQAVAYRELSLLLRRPPGREAYPGDVFYLHSRLLER SAKVSDDLGGGSITALPIIQTQAGDISAYIATNVISITDGQIFLQENLFNSGIRPAIDAG SSVSRVGGSAQIKAMKKVAGTLRLDLASYRELEAFTQFGSDLDAATQAKLNRGRRTIEVL KQPLHKPLPVEKQVVILYALTHGFLDSVPVDQILDFEEALYDYFDSHHEDIFETIRTTKD LPEESVLNEAIQAFKDQSEYK >gi|311100154|gb|AEKO01000011.1| GENE 125 124798 - 125676 1082 292 aa, chain + ## HITS:1 COG:SPy0759 KEGG:ns NR:ns ## COG: SPy0759 COG0224 # Protein_GI_number: 15674807 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Streptococcus pyogenes M1 GAS # 1 292 1 291 291 420 77.0 1e-117 MAGSLREIQAKIASTKKTSQITGAMQMVSASKLTRSEQAAKDFQIYASKIRQITTDLLHS ELINGSSNPMLDARPVRKTGYIVITSDKGLVGGYNSTILKAVLDMIKRDHDSEDEYAIIS IGGTGSDFFKARNMNVAFELRGLEDQPSFEQVGKIISKAVGMYQNELFDELYVCYNHHVN SLSSEVRVEQMLPIADLDPNESEGHVLTKFELEPDRDTILDQLLPQYAESLIYGAIVDAK TAEHAAGMTAMQTATDNAKNVINDLTIQYNRARQAAITQEITEIVGGASALE >gi|311100154|gb|AEKO01000011.1| GENE 126 125753 - 127159 1910 468 aa, chain + ## HITS:1 COG:SPy0760 KEGG:ns NR:ns ## COG: SPy0760 COG0055 # Protein_GI_number: 15674808 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 468 1 468 468 843 93.0 0 MSSGKIAQVVGPVVDVAFAAGDKLPEINNALVVYTDEQKSKRIVLEVALELGEGVVRTIA MESTDGLTRGLEVLDTGRPISVPVGKDTLGRVFNVLGDTIDLEAPFADDAEREPIHKKAP TFDELSTSTEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGIS VFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVE GQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTKKGSVTSI QAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEH YAVATEVQRVLQRYRELQDIIAILGMDELSDEEKTLVGRARRIQFFLSQNFNVAEQFTGQ PGSYVPVAETVRSFKEILEGKYDNLPEDAFRSVGPIEDVVAKAKAMGY >gi|311100154|gb|AEKO01000011.1| GENE 127 127172 - 127588 471 138 aa, chain + ## HITS:1 COG:SPy0761 KEGG:ns NR:ns ## COG: SPy0761 COG0355 # Protein_GI_number: 15674809 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Streptococcus pyogenes M1 GAS # 1 138 1 138 138 175 70.0 2e-44 MAQMTVQVVTPDGLKYDHHASFIHAVTKDGQIGILPGHINLIAPLEVDELKVRRVDDESH VDWIAVNGGIIEVKDDFITIVADSAERERDIDVSRAERAKQRAERDLEEATKSDRIDEVQ RAQVALRRALNRISVGTK >gi|311100154|gb|AEKO01000011.1| GENE 128 128075 - 129124 768 349 aa, chain + ## HITS:1 COG:SPy0609 KEGG:ns NR:ns ## COG: SPy0609 COG0772 # Protein_GI_number: 15674690 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Streptococcus pyogenes M1 GAS # 1 346 88 431 434 461 69.0 1e-130 MGVVIAFEILLLVIAKFFTREINGANGWIVLGPLSFQPAEYLKIIVVWFLAHTFSKQQSA IERYDYQALTKNRWIPRNKKEFNDWRYYLLVMIGLVAIQPDLGNAAIIVLTTVVMFSISG VGYRWFTALFAGIVGLSSAFLGLIALVGVQNMAKVPVFGYVAKRFAAYFNPFKDLTGSGL QLSHSYYAMSNGGWFGLGLGNSIEKTGYLPEATTDFVFSIVIEELGLIGAGLILALLFFL ILRIMIVGVKARNPFNSMMALGVGALMLMQVFVNIGGISGLIPSTGVTFPFLSQGGNSLL VTSVGIAFVLNIAANEKRDNIVQAIEDELSQTQELENQDEKIVPLRGSR >gi|311100154|gb|AEKO01000011.1| GENE 129 129356 - 130552 1398 398 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 396 1 405 407 543 66 1e-153 MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSAVNTPKDYASIDAAPEER ERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTR EHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDLLSEYDFPGDDIPVIQGSALK ALEGDSKYEDIIMDLMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGVV RVNDEVEIVGLKEEIQKAVVTGVEMFRKQLDEGIAGDNVGVLLRGIQRDEIERGQVLAAP GSINPHTKFKGEVYILSKEEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEMVMPGDN VTIDVELIHPIAVEKGTTFSIREGGRTVGSGIVSEIEA >gi|311100154|gb|AEKO01000011.1| GENE 130 130674 - 131930 542 418 aa, chain - ## HITS:1 COG:SP0460 KEGG:ns NR:ns ## COG: SP0460 COG3464 # Protein_GI_number: 15900376 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pneumoniae TIGR4 # 1 417 1 421 422 475 60.0 1e-134 MRLIKNTTELIGIKDPNIKISLVFETDTHIEIQAKLEYPAPSCPHCHGKMIKYDFQKNSK IPLLEQAGTPTLLRLKKRRFQCKSCRRITVAKTSIVEKNCQISNIVRQKVTQLLTEKVSL TDIARRLRVSTSTVYRKLDQFTFKEHYDKLPAVMSWDEFGFKKGELAFVAQNYETNELIT ILDNRRQTTIRNYFLKYPLKARQQVQFITMDMSGAYIPLARRLFPNAEIIIDRFHIIQHL GRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVE KTLNFSEELANYYNLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYI QNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIKKEKTYQVLSRC >gi|311100154|gb|AEKO01000011.1| GENE 131 132223 - 132981 960 252 aa, chain + ## HITS:1 COG:SP1574 KEGG:ns NR:ns ## COG: SP1574 COG0149 # Protein_GI_number: 15901416 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Streptococcus pneumoniae TIGR4 # 1 252 1 252 252 449 98.0 1e-126 MSRKPFIAGNWKMNKNPEEAKAFVEAVASKLPSSDLVEAGIAAPAVDLTTVLAAAKGSNL KVAAQNTYFENAGAFTGETSPQVLKEIGTDYVVIGHSERRDYFHETDEDINKKAKAIFAN GMLPIICCGESLETYEAGKAAEFVGAQVSAALAGLTAEQVASSVIAYEPIWAIGTGKSAS QDDAQKMCKVVRDVVAADFGQEVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLE AESFLALLDFVK >gi|311100154|gb|AEKO01000011.1| GENE 132 132849 - 133112 104 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSKPQNISKLYLYKPHIYLIRFSFLDTCLQTKKPRTVLELFIHYLTKSSNAKKLSASSD APPTRAPSTSGQAMYSATFSGLTDPPY >gi|311100154|gb|AEKO01000011.1| GENE 133 133218 - 133847 711 209 aa, chain + ## HITS:1 COG:SPy0399 KEGG:ns NR:ns ## COG: SPy0399 COG0125 # Protein_GI_number: 15674539 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Streptococcus pyogenes M1 GAS # 1 201 1 201 211 261 66.0 7e-70 MSKGLLISIEGPDGAGKTTVLEALLPRLREAYPAKVVTTREPGGVAIAEQIREVILDVNN TAMDAKTELLLYIAARRQHLVERVLPELEEGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW LNAYATDGYKPDVTLLFDVDSETGLARIAANGEREVNRLDLEKLDLHQRVRQGYLDLAQA EPERIKIIDASQAFEDVVEEAWKVIKGYL >gi|311100154|gb|AEKO01000011.1| GENE 134 133856 - 134731 494 291 aa, chain + ## HITS:1 COG:SPy0400 KEGG:ns NR:ns ## COG: SPy0400 COG0470 # Protein_GI_number: 15674540 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Streptococcus pyogenes M1 GAS # 1 291 1 290 291 273 50.0 4e-73 MKLAESQSKLFEEFSQIIRENRLSHAYLFSGDFGSLDMAIWLAQSRFCVTPENGLPCGHC RPCRLIAQGDFSDVKIVEPQGQIIKTDTIRQLTREFSQSSFEGQAQVFIIRDADKMHVNA ANSLLKFIEEPQSQIYIFLLTADDSRMLPTIKSRAQLFYFPKNRAYLEELLQKEGLLLTQ AKVLADFAKDDVQALDLAKDNKVLDLINTVERFTQSLLSNQDLLYLDVAKLAVQCSEKSE QEIVWAFLTYQLGKDIQNPQARRWLDLVYEARKMWLANVSFQNAMEYMVLS >gi|311100154|gb|AEKO01000011.1| GENE 135 134728 - 135534 665 268 aa, chain + ## HITS:1 COG:BH0045 KEGG:ns NR:ns ## COG: BH0045 COG1774 # Protein_GI_number: 15612608 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus halodurans # 1 252 1 254 275 218 44.0 6e-57 MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPADLN RVEGLAGEKDFARYDENLLKAEKSMGVVADLIAQNQLDMRVVDIVFPLNSSYVRISFVAE KRVDFRQLLKDLATYFKTRIELRQISSREESKIYGGLGPCGRALCCSSFLGEFPPVSIKM AKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGTGQVVAIDVI AGTIKVVFEKGRAPLTYGVEEVQLNGKA >gi|311100154|gb|AEKO01000011.1| GENE 136 135521 - 135841 263 106 aa, chain + ## HITS:1 COG:SP0937 KEGG:ns NR:ns ## COG: SP0937 COG4467 # Protein_GI_number: 15900817 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 103 105 103 51.0 1e-22 MEKRELYDKFEELSQNLMSMLAEVEAIKANFSGILDENTALKLENDKLREHLSQVVQEET GTKMSHGKVNLEAIYDDGFHICPDFYGQRRDNNEACGFCAELLYGD >gi|311100154|gb|AEKO01000011.1| GENE 137 135844 - 136710 790 288 aa, chain + ## HITS:1 COG:SPy0406 KEGG:ns NR:ns ## COG: SPy0406 COG0313 # Protein_GI_number: 15674543 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 286 1 285 287 429 76.0 1e-120 MQVQKSFKGQSNYGTLYLVPTPIGNLQDMTFRSVQILKEVDLICAEDTRNTGLLLKHFEI ETKQYSFHEHNAYEKIPDLLERLKSGLSLAQVSDAGMPSISDPGHDLVKAAIAEDIPVVA LPGASAGITALIASGLAPQPHIFYGFLPRKKGQQIDFFKGKVSYPETQIFYESPYRVADT LENMHEVYGNRQVTLVRELTKLYEEYQRGSISEILDYIASNPLKGECLLIVAGDSENSRE ENLTSDVTPVKAVEALIASGMKPNQAIKTIAKERKINRQELYNLFHRV >gi|311100154|gb|AEKO01000011.1| GENE 138 136847 - 138082 1355 411 aa, chain + ## HITS:1 COG:L0236 KEGG:ns NR:ns ## COG: L0236 COG0004 # Protein_GI_number: 15673574 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Lactococcus lactis # 1 411 1 413 413 461 66.0 1e-130 MDTGSSAFILICSAMVCLMTPALAFFYGGLGRRKNVINTMMMSVLPLAIASLLWIVAGYS LSFGGHGNFFGNFSHLFLNGVSETISSRGLAIPDLLFAAFQMMFSIICVAILTGSVVERM RFTPLTIFVVFWLFLVYYPFAHMVWDEGLLAKWGTIDFAGGDVVHITSGVSALVLAIVVG KRRDFGILEHRPHNVPFVLLGAGLLWFGWFGFNAGSALAANGLAVHALVTTHVSAAAAMF SWLALEKYVTGHPSLVGGSTGLVAGLVAITPGAGFVSIWSAILIGAMVSPVCFYAISVLK KRFAYDDALDAFGCHGVGGIFGGLATAIFTTPDLALDKVNIGLIYGKAHLFIVTILAIIF TAIWSALVTYGIIKVIAHYMPLRVTDRDEAIGLDDCEHKETAYPTFMGLDS >gi|311100154|gb|AEKO01000011.1| GENE 139 138093 - 138434 568 113 aa, chain + ## HITS:1 COG:L0235 KEGG:ns NR:ns ## COG: L0235 COG0347 # Protein_GI_number: 15673573 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Lactococcus lactis # 1 113 1 113 113 129 66.0 1e-30 MKKVEAIIRSDKLEDLKNALTGSGLAKGMTVSQVLGYGNQRGFAEFVRGQRIVPTLLAKV KVEIVVKDMAVDEVVDAIRSAVATGEVGDGKIFIVPIDDVIRIRTGERGGDAI >gi|311100154|gb|AEKO01000011.1| GENE 140 138638 - 139180 447 180 aa, chain + ## HITS:1 COG:SPy0857 KEGG:ns NR:ns ## COG: SPy0857 COG1705 # Protein_GI_number: 15674890 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 25 178 39 192 235 171 62.0 5e-43 MGLFALLGLLASLNFPRLTMEKNMTPTDETTVAFIAEIGETSRYLAARNDLYASVMIAQA ILESDSGQSSLSQKPSYNFFGIKGEYNGQSVTLPTWEDDGKGNPYHIDAAFRSYGSVENS LQDYVDFLEGSYYVGVHRSKTKSYKDATAALTGVYATDITYGDKLNSIIEQYQLTIYDTY >gi|311100154|gb|AEKO01000011.1| GENE 141 139203 - 140024 726 273 aa, chain + ## HITS:1 COG:SPy1700 KEGG:ns NR:ns ## COG: SPy1700 COG0561 # Protein_GI_number: 15675557 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 6 273 2 269 274 285 54.0 5e-77 MNQNQVKLIAIDMDGTLLNSQKEIPEENIKAIQDAAAAGIKIVLCTGRPRSGIVPHFEKL GLSEEEYIIMNNGCSTYETKNWTLLQSESLSRSEMEALLQACEDFPGVALTFTGEKTYYV VGNEVPELVAYDAGTVFTEAKARSLEKIFEEGQVIFQAMYMADSESLDAFQNAVQDRLNQ SYSTVRSQDYIFEIMPQGATKASGLKHLAEKLGINPEQIMALGDAANDLEMLQFVGQSVA MGNASDDIKALCKYVTLTNDEAGVAHAIRTWAL >gi|311100154|gb|AEKO01000011.1| GENE 142 140042 - 140551 432 169 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_1532 NR:ns ## KEGG: SmuNN2025_1532 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 9 164 2 157 163 165 62.0 6e-40 MIIYLLAQVFSAIGALCVAISSFAKSKNKMLAWQITDYIFTATANLLLGGYTGALTISIS IIRNRLMIKKKMTKTILTILIILQIIVGSYLNQLGVIGYLPIISSVSYSLAIAATPNLQW LRWVIIENMLLWLIYDLTIQAYPAAITDVTITLTTLIAIIRNRKTFSKQ >gi|311100154|gb|AEKO01000011.1| GENE 143 141013 - 142569 2116 518 aa, chain + ## HITS:1 COG:SPy1695 KEGG:ns NR:ns ## COG: SPy1695 COG1283 # Protein_GI_number: 15675553 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Streptococcus pyogenes M1 GAS # 1 513 26 538 543 722 72.0 0 MGDGLQQAAGDKLRFYIDKYTSNPFLGVLIGIVMTALIQSSSGVTVIVVGLVSAGLLSLR QAIGIVMGANIGTTVTSFMIGFKLGDYALPVIFLGAAFLFFTSNKKLNNLGRILFGVGGI FFALNLMGDAVEPLKSVTAFKDYLATLGDRPIMGVIIGSGLTMLIQSSAATIGILQSLYS GGLLDLQGALPILFGDNIGTTITAVLAALGSNIAAKRVAGAHVLFNVIGTVLCLVLLVPF TALIQWFKSMLGLTPEMTIAFAHGTFNIANTIVQFPFIGLLAYLVTKIIPGEDEVNKYEA LYLDRLLITQAPAIALGNAKKELVHLASYAIQSLEASYAFFDKGDEKYFDKVEKYETAVN SIDEELTTYLIDISNESLSVSENEVLASVLDSVRDLERIGDLAVASANLSQHIHNKGIEF SETAKTELGDVYNRTHRIVLDSIRVVVDDDKVLAGQVILRHEELEKLEKQLRKTHTKRLN NGECTAQAGINYVDYLSHYTRIADHAINLVEKVTEGVI >gi|311100154|gb|AEKO01000011.1| GENE 144 142639 - 143802 1308 387 aa, chain + ## HITS:1 COG:SPy1694 KEGG:ns NR:ns ## COG: SPy1694 COG1820 # Protein_GI_number: 15675552 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Streptococcus pyogenes M1 GAS # 6 386 1 381 382 489 61.0 1e-138 MRGGPMTYYISAKRFYFENKIKEGGYLAVVDGRFGDWSEKVPEGAEVLDYSDYQIAPGLV DTHIHGFAGYDVMDNSEESLLGMSQALLSAGVTSFLPTALTAPFEELKAICQTAAETAGK EPGAKIQGLFFEGPYFTETYKGAQNPKYMGNPSIEQLQAWQEAAQGKLIKLALAPEREGV VEFIKEATGQGVTIALGHSNATYEEAVAAVEAGASVWVHVYNGMRGFTHREPGMVGAAFD SPETIGELIADGHHVVPAACKVLIKQKTPQGVALITDCMSAGGCPDGDYMLGELPVIVEN GTARLKEGGNLAGSILQLKDGVKHVVDWGLVTVAQALQMASHVPAKSVGLENTCGSLKAG LPADFIVLDDSLDLQATYIDGRKGWEK >gi|311100154|gb|AEKO01000011.1| GENE 145 143908 - 145152 1007 414 aa, chain + ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 1 369 1 369 400 246 37.0 5e-65 MSKRIWSIALAYVGVMIGAGVSSGQDLLQYFVSFGAWGLIGVIVLGILHVGFGRLMIALG SYYRSDDHSVVLAEISHPVIYRILDIALIITCFLFGFVMTAGAGANLNQQFGFPIWVGAF LCTALTIFVSFLDFKKIIGVIGVFTPMILVMIAMIFVTNVLGRHWDFAEMDKVSQTIQSP FPSVWMSVINYFAVCVMSAIAMAFVMGGSILKINEAEKSGAWGGFMVGVIFFVTTLILFA NSDKVASSDVPMLAIAKEVNPIFATLYALVIFGLIFNTVFSLYYALGKRFSAGSDKRFKF FVAAFALAGFAISFVGFRQLVAVMYPIIGYLGILMLVVLVVASYRKKAKIRKEKEIRNHL LSIVEKAYDPNQDLTHQDRKKAQELREASIIDNDILHEDSHAHVRQEMGISEKD >gi|311100154|gb|AEKO01000011.1| GENE 146 145425 - 145796 251 123 aa, chain + ## HITS:1 COG:PA2706 KEGG:ns NR:ns ## COG: PA2706 COG3791 # Protein_GI_number: 15597902 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 119 1 118 131 76 36.0 1e-14 MLKGSCLCKAVTYTLDEELSELVFCHCSFCRKATASAYTVNAKVSSKNLVLHGKEKLVTY SSSPGKQRYYCQNCHSQIFTVQENIPEVCALKLGTIDECDQNLQTVPKRHIFQDPAFSWL LDK >gi|311100154|gb|AEKO01000011.1| GENE 147 145832 - 146749 1074 305 aa, chain + ## HITS:1 COG:SPy1689 KEGG:ns NR:ns ## COG: SPy1689 COG0752 # Protein_GI_number: 15675549 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 1 305 1 305 305 602 96.0 1e-172 MSKKLTFQEIILTLQQYWNDQGCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPS RRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWE NPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTSEVTYGLERLASYIQEVDSVYD IEWAPGVKYGEIFLQPEYEHSKYSFEVSDQDMLLENFEKFEKEAGRALELGLVHPAYDYV LKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKKLGYPLLDEATRAKLL AEEEE >gi|311100154|gb|AEKO01000011.1| GENE 148 146774 - 146956 100 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFFLRKIFFSSLPYVIVTQATDCVVSLLKLEPMSPILPGIVSFSNDTFITAATGSVGLLY >gi|311100154|gb|AEKO01000011.1| GENE 149 146955 - 148991 2419 678 aa, chain + ## HITS:1 COG:SPy1688 KEGG:ns NR:ns ## COG: SPy1688 COG0751 # Protein_GI_number: 15675548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Streptococcus pyogenes M1 GAS # 1 678 1 679 679 1009 79.0 0 MTKNLLVELGLEELPAYVVTPSEKQLGEKMAAFLDNNRLSYESIQTFSTPRRLAVRVIGL ADQQSDLTEDFKGPSKKIALDAEGNFSKAAQGFVRGKGLTVDDIEFREVKGEEYVYVTKH EAGKPAKEVLAGVPEVLSSLTFPVSMHWANNTFEYIRPVHTLVVLLGDEALNLDFLDIKS GRVSRGHRFLGHEVEITNADSYEEDLRTVYVIADSKERENMIREQIKAIESEQGVQVQIE EGLLNEVLNLVEYPTAFMGSFDTKYLDVPEEVLVTSMETHQRYFVVRDLDGKLKPNFISV RNGNAEHLENVIRGNEKVLVARLEDGEFFWREDQKLKIEDLVAKLANVTFHEKIGSLSEH MARAGVIAASLAEQAGLTAEERAAVARAAEIYKFDLLTGMVGEFDELQGIMGEKYALLAG EDAAVATAIREHYLPDSADGALPETKVGAILALADKLDTLLSFFSVGLIPSGSNDPYALR RATQGIVRILDAFGWHIPMDELIDSLYALSFDSLSYDNQAEVINFIKARVDKMMGRTSKD IKEAVLAGSNFVVADMLEVADALSAAAKADGYKAAVESLSRAFNLAEKADDSVAVDASLF ENNQEKVLSKAIEELELTGSASDKLAQLFALSPVIDAFFDNTMVMAEDEAVKNNRLALLS SLVAKAKAVAAFNQLNTK >gi|311100154|gb|AEKO01000011.1| GENE 150 149062 - 149259 153 65 aa, chain + ## HITS:1 COG:SP1473 KEGG:ns NR:ns ## COG: SP1473 COG4224 # Protein_GI_number: 15901323 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 65 21 85 85 92 90.0 1e-19 MTPEEAVEQAKLREEYIEGYRRSVRHHIEGIKVVDEEGNDVTPEKLRQIQREKGLHGRSL DDPES >gi|311100154|gb|AEKO01000011.1| GENE 151 149427 - 150818 1301 463 aa, chain + ## HITS:1 COG:SPy1654 KEGG:ns NR:ns ## COG: SPy1654 COG1113 # Protein_GI_number: 15675525 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Streptococcus pyogenes M1 GAS # 8 460 6 457 459 646 75.0 0 MSQKQHHKDDENQTENGMVRGLQNRHVQLIAIAGTIGTGLFLGAGRSLSLTGPSIILVYI LTGIFMYLMMRAIGEMLYMDPDQHTFINFITKYLGKGWGFFSGWSYWVSLIFLGMAEITA VSTYVQYWFPSWPAWQIQIVFLIILSSVNLIAVKIFGEVEFWFGMIKIVTILALIATGIF MVATNFETPAGHASLTNITQGFQMFPKGWVSFVMTFQMVFFAYQAIEFVGITTSETANPR KVLPKAIKEIPIRIVIFYVGALIALMAIFPWQKLPVNESPFVTVFQMAGIKWAAAFINFV VLTAAASSLNSTLYSTGRHLFQIAKETPNSKVMKALKLDTLSRNGIPSRAIIVSAIVVCV SAFINVLPGVSDAFALITASSSGVYIAIYILTMLAHLKYRKSQEFMADGFLMPAYKILNP LTILFFIFVFVCLFLQKSTVVGAIGATIWIVVFSIYSNWKHSK >gi|311100154|gb|AEKO01000011.1| GENE 152 150891 - 151526 542 211 aa, chain - ## HITS:1 COG:no KEGG:STER_0543 NR:ns ## KEGG: STER_0543 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 1 211 1 211 211 371 87.0 1e-101 MKTRAIIEFKDTYASMECHELGYQTKETALAIISPTGHILSSTPLFRKAYGSNTAHIDQL PFNMDDLSITARGLSKKAKANLEDWIAHTIILPMNYDKYFTKHQELLHLLAESPIVESVQ ALTYKTVKIHFSEALNDEHIRQLQGFILAQAGIYSYIGTSTVSDRNAHQALEWAKLDVNG RSHNDHKPAIFHRSKDLISGFFHHGSQESIA >gi|311100154|gb|AEKO01000011.1| GENE 153 151835 - 153736 2083 633 aa, chain + ## HITS:1 COG:L90678_2 KEGG:ns NR:ns ## COG: L90678_2 COG1263 # Protein_GI_number: 15673442 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Lactococcus lactis # 97 455 9 369 386 323 50.0 6e-88 MAKYTELAEDILKHVSGKENVNSLKHCVTRLRFDLKDESKADDDYLKNRDGVVTVVKAGG QYQVVIGNHVPDVYAEVLQVGGLPAGGSLDLDEGDAQKGNLFDRFVSLVSSIFQPFLGPL AAAGIIKGVVAIMAACGLSAATSPIYVILNAAGDGFFQFLPILIALTSARRFKVNEFTAI AIAGALVYPDIATLVTALQKAGQGHVLGVIPFALPAGGYLSTVMPSILAIWVASYIQKFF TKITPDVIKVFVVPFFTLLITVPLTFLVVGPVANTFSNGLTNLFQAIMNFNPIVFGLVLG VLWQVLVMFGMHWALVPLAILDVATNGSSIILSAAILPCFTQTGVLGAIMLKTKEEKVRT ISMPAFISSIFGVTEPAIYGVTLPMKTPFYISCGVSGLMGAVMMALDIKAYSIGGLGVFV FPSLIGPDGNLSKVIFAIIIAIVGGVLAFLIQLFVRVPNLYGGGSAKGEEKAEEAAPAPK EIQQEIIASPLIGNIVPLDQVPDQVFASGAMGKGIAIDPTDGVVVAPAKATVNLVFPTGH AIGLTTENGAELLIHIGMDTVSLAGKGFKTYVEAGDVVEAGQKLIEFDLATIRDAKLPVI TPVIVTNTADFDDVLTTKEARVNTGDYLFTAVK >gi|311100154|gb|AEKO01000011.1| GENE 154 153766 - 154524 892 252 aa, chain - ## HITS:1 COG:SPy0457 KEGG:ns NR:ns ## COG: SPy0457 COG0652 # Protein_GI_number: 15674576 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Streptococcus pyogenes M1 GAS # 4 252 1 267 268 266 53.0 3e-71 MKNIKKYIPLIIVLVLAVLGFIYRENISRAVRGDAYVDSKIFTKQLEKAQKSGKEAFPQL TDKVDKDEAEVILHTSKGDITVKLFPTLAPKASENFLKHTKDKYYDGLTFHRVIKDFMIQ SGDPKGDGTGGESIWKKGFAVEPTPFLYNIRGALAMANTGAKDSNSSQFFIVQNKDDQSK QLGNAGYPKPIIDAYKKGGYPAGDTKYTVFGQVIKGMDVVDTIANLEVDNNSKPKENVIV NSVEVVKDYKFK >gi|311100154|gb|AEKO01000011.1| GENE 155 154813 - 156069 1282 418 aa, chain + ## HITS:1 COG:no KEGG:STER_0550 NR:ns ## KEGG: STER_0550 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 250 407 1 158 158 211 72.0 4e-53 MSTKAEWAELFESVHGRKPSPQEFLDAKAADFDTSVLIAQVASVQEAANEPVAEEVPAEQ ASSESPFGDAAFSEAPAQQPIPQFDSSMFEKASIPTAKGFGTVPNPVDSSADKLLFNLIL PIVTITLAVIFAILAWIVSPAWLFIILTVLVVAVAVVSLIFSLKSSKKLLSIIATGVAGL MLFVSIGGFIFQMAQNSSDSTSSSKTSKVADKDDDDSDLKSDSKGDSTDVNDYIDKNAKF DWNESKFKKLKAGKDSVKSIIKTYGKASNAEMSGDELKLTYSGKDYGESVYLNFKKQYDG TFILSYASGSFPQDKVEVDNSYKSDWTKEQYEALTEGDYSDPSNGTKLKDVIKDHPKASN ADYTISTSREGEFKKEMTLSYSDFDAEEGKLKSVYLSFDAKEGEDTFYLAYKSGLGDD >gi|311100154|gb|AEKO01000011.1| GENE 156 156552 - 156680 109 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTLLENLKNLGAYLYLYEGDCEVNMEFRSNTNESYKGIAEE >gi|311100154|gb|AEKO01000011.1| GENE 157 156891 - 158120 1289 409 aa, chain + ## HITS:1 COG:no KEGG:STER_0551 NR:ns ## KEGG: STER_0551 # Name: not_defined # Def: hypothetical protein # Organism: S.thermophilus_LMD9 # Pathway: not_defined # 287 409 1 123 123 177 76.0 5e-43 MATKEEWVRHFEDVNGRKPSPEEFMEAKKEDFVIATEDETAQVSEQIEAQQVDSSETTEE VSVDSVADTQLDEVQVTLEEEAPNHMPELNLEKEQEKETPKTSQIPLENPYYKPKVTKNN AFVNIALPIIILVLGILFVVLSWTLPIGFVFTFLAFFLIILAIVTLVLSLKSTRKALSII ALVMSIIFFMTSLAGAGYQAVKYVMNHADQFEADLRYRANKYINKDYQFDWTEDQFKDLK VDSLTLDEVLDAHGKATDAEWRNEGETLTLDLTYSKEGTGSDHFVRLTFKSKDGTYILEH ASADFGYDKVKEVSDYHSNWTKDDYEKLSVGTQADLLKGTRLSEVVEKHPEASFTYHEMT QTEQGDLTQSVSLSYRDYNPESDKLDTVRLTFDYDKRENEYFLTDKSDE >gi|311100154|gb|AEKO01000011.1| GENE 158 158235 - 159140 991 301 aa, chain + ## HITS:1 COG:SP0927 KEGG:ns NR:ns ## COG: SP0927 COG0583 # Protein_GI_number: 15900807 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 297 1 297 302 445 75.0 1e-125 MNIQQLRYVVAIANSGTFREAASKLFVSQPSLSVAIKDLEQELNFKIFTRTTTGAVLTSQ GMTFYERALEVVRSFDSFENRYLNASEKGNQFSIASQHYDFLPPLITTFSERYPDYKDFR VFESTTIQILDEVAKGHSEIGIIYLNRQNSKGIQQNMDKLGLEAIDLIPFKTHIYLRKGH PLAHKESLVMEDLAHLPTVRFTQEKDEYLYYSENFVDTSDSSLMFNVTDRATLNGILERT DAYATGSGFLDAQSVNGITVIPLEDNLDNKMVYVRRKGINLSSCALKFVNVMFDYFDTYK P >gi|311100154|gb|AEKO01000011.1| GENE 159 159149 - 159610 355 153 aa, chain + ## HITS:1 COG:SPy0826 KEGG:ns NR:ns ## COG: SPy0826 COG0597 # Protein_GI_number: 15674864 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Streptococcus pyogenes M1 GAS # 1 149 1 149 152 159 62.0 2e-39 MRKVVIPLAILALIGLDQWVKHWVVANIALNQVIKAIPGLFSLTYLQNRGAAFSILQGQK YFFVILTVLVIGAALVYLVKNYQKSLWLVLSLILIISGGIGNFIDRLYLGYVVDMVQLDF IDFAIFNVADSYLTVGVLLLILILWKEENGSHH >gi|311100154|gb|AEKO01000011.1| GENE 160 159594 - 160484 1127 296 aa, chain + ## HITS:1 COG:SP0929 KEGG:ns NR:ns ## COG: SP0929 COG0564 # Protein_GI_number: 15900809 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Streptococcus pneumoniae TIGR4 # 1 295 1 295 295 476 82.0 1e-134 MEVIIKEAGNRLDKALADLTELSRSQANEAIKAGTVLVNGKSAKAKYAVKEGDVITYVLP EEEVLEYKAEDIPLDIIYEDADVAVVNKPQGMVVHPSAGHTSGTLVNALMYHVKDLSSIN GVVRPGIVHRIDKDTSGLLMIAKNDKAHNALAAELKDKKSLRKYVAIVHGNLPNDRGVIE APIGRSDKDRKKQAVTAKGKPAVTRFTVLERFGNYTLVELQLETGRTHQIRVHMAYIGHP VAGDPLYGPRKTLKGHGQFLHAKTLGFTHPTTGELVEFTAEEPAIFKKTLEKLREA >gi|311100154|gb|AEKO01000011.1| GENE 161 160702 - 161223 833 173 aa, chain + ## HITS:1 COG:SP1278 KEGG:ns NR:ns ## COG: SP1278 COG2065 # Protein_GI_number: 15901138 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 171 1 171 173 221 77.0 4e-58 MKKKEIVDDVTMKRAITRITYEIIERNKNLDKIVLAGIKTRGVYIAQRIQERLKQLENLD VPLIELDTKAYRDDVKSEQDTSLIPIEIDGTDVILVDDVLYTGRTIRAAIDNIVSHGRPA RVGLAVLVDRGHRELPIRADYVGKNIPTSESEEIEVLVTEVDGKDSVNIIDPS >gi|311100154|gb|AEKO01000011.1| GENE 162 161642 - 162919 1005 425 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 7 425 6 427 447 391 47 1e-107 MNNVKYDVNDMPKAGLLVGLSFQHLFAMFGATVLVPILVGIDPAIALFSSGLGTLAHLTV TKYKIPAYMGSSFAYIAAMQMLMKTDGIAAVAQGAMAGGLVYLIVALVVKYAGNAWIDRV LPPIVVGPIIIVIGLSLAANAVKDATMVNDTYSIFSLVISMVTLFAVILFNMYGKKIIGV IPILLGLIVGYIFSVVLGWLTGHEFVQFSKVAAAHWFQVPSFDIPFVNYDFKLYPSAILT MAPIAFVTMTEHFGHVMVLNSLTGRDYFKDPGLDRTLTGDGLAQIIAGFFGAPPVTSYGE NIGVMALSKVYSVYVIAGAAVIAVLMSFIGKVSALLSSIPTAVLGGISIALFGVIAASGL KILVEHKIDFDNKKNLLIASVILVSGIGGLMIDLGGLQITGVATSTILGILLYQILPDPN KGSKD >gi|311100154|gb|AEKO01000011.1| GENE 163 162943 - 163869 1109 308 aa, chain + ## HITS:1 COG:SPy0832 KEGG:ns NR:ns ## COG: SPy0832 COG0540 # Protein_GI_number: 15674868 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Streptococcus pyogenes M1 GAS # 1 307 1 307 311 457 72.0 1e-128 MAIADGKVSLKHLVTMETLTNEEVLGLIRRGGDFKNGRADFQLDRQYFAANLFFENSTRT HKSFEVAEKKLGLDVIEFDAGTSSVNKGETLYDTILTMSALGVDICVVRHSEVDYYKQLI DSRTIQTSIVNGGDGSGQHPSQCLLDLMTIYEEFGTFKNLKICIAGDITHSRVAKSNMQI LKRLGAQLYFAGPAEWYSNEFDVYGQHVAIDDVIEGLDVLMLLRVQHERHGDDKGFSKED YHALYGLTEERYAKLSDQAIIMHPAPVNRDVEIADSLVEAPKARIVAQMQNGVFVRMAII EAILNGKA >gi|311100154|gb|AEKO01000011.1| GENE 164 164033 - 165121 1053 362 aa, chain + ## HITS:1 COG:SPy0833 KEGG:ns NR:ns ## COG: SPy0833 COG0505 # Protein_GI_number: 15674869 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Streptococcus pyogenes M1 GAS # 1 356 1 356 360 656 85.0 0 MAKRLLILEDGTIFEGQAFGADVDVTGEIVFNTGMTGYQESITDQSYNGQILTFTYPLVG NYGVNRDDYESIKPTTKGVVVSEASRRASNWRNQMTLDEFLKAKNIPGVSGIDTRALTKI IRQHGTMKATLANPGDSIGHLQDQLRATVLPTNNIEQVSTKTAYPAPGVGKNIVLVDFGL KHSILREFSKRDCNVTVVPHDITAEEILHLNPDGVMLSNGPGNPEDVPYSLDMIRGIQGK IPIFGICMGHQLFSLANGAKAYKMKFGHRGFNHAVREIATGRVDFTSQNHGYAIDRDTLP ECLMVTHEEINDKSVEGVRHRDFPAFSVQFHPDAAPGPHDASYLFDEFLELIDAFQAEKA RH >gi|311100154|gb|AEKO01000011.1| GENE 165 165352 - 168531 3932 1059 aa, chain + ## HITS:1 COG:SP1275 KEGG:ns NR:ns ## COG: SP1275 COG0458 # Protein_GI_number: 15901135 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Streptococcus pneumoniae TIGR4 # 1 1059 1 1058 1058 1861 88.0 0 MPKRSDIKKIMVIGSGPIIIGQAAEFDYAGTQACLALKEEGYSVVLVNSNPATIMTDKEI ADKVYIEPITLEFVTRILRKERPDALLPTLGGQTGLNMAMELSKAGILEELGVELLGTKL SAIDQAEDRDLFKQLMEDLKQPIPESEIVNTVEEAVAFATEIGYPVIVRPAFTLGGTGGG MCANEEELREIAENGLKLSPVTQCLIERSIAGFKEIEYEVMRDAADNALVVCNMENFDPV GIHTGDSIVFAPTQTLSDIENQMLRDASLKIIRALKIEGGCNVQLALDPNSFKYYVIEVN PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMINPVTGTTYAMFEPALDYVVAKIPRF PFDKFEHGERRLGTQMKATGEVMAIGRNIEESLLKACRSLEIGVYHNEMSELADVTDDAL VEKIVKAQDDRLFYLSEAIRRGYTIEELSELTKIDIFFLDKLLHIFELEQELATHVGDVD VLKEAKRNGFSDRKIADLWNQTADQVRATRLENNIVPVYKMVDTCAAEFESSTPYFYSTY EWENESIKSDKESVIVLGSGPIRIGQGVEFDYATVHSVKAIQAAGYEAIIMNSNPETVST DFSVSDKLYFEPLTFEDVMNVIELEQPKGVVVQFGGQTAINLAEPLSKAGVKILGTQVAD LDRAEDRDLFEQALKDLDIPQPPGQTATNEEEAVEAARKIGFPVLVRPSYVLGGRAMEIV ENEDDLRSYMRTAVKASPDHPVLVDSYIIGRECEVDAISDGKDVLIPGIMEHIERAGVHS GDSMAVYPPQTLSKKIQETIADYTKRLAIGLNCIGMMNIQFVIKDETVYVIEVNPRASRT VPFLSKVTDIPMAQVATNLILGKSLAEQGYKDGLYPESSHVHVKAPVFSFTKLAKVDSLL GPEMKSTGEVMGTDATLEKALYKAFEASYLHLPTFGNVIFTIHDDTKEEALDLARRFDAI GYGIYATEGTAKFLNEHGVHATLVNKLGENDDNDIPALVRTGKAQAIINTVGNKRTYDED GAAIRSSAIEAGIPLFTALDTADAMVRVLESRSFTTEAI >gi|311100154|gb|AEKO01000011.1| GENE 166 168650 - 169405 507 251 aa, chain + ## HITS:1 COG:TM0524 KEGG:ns NR:ns ## COG: TM0524 COG0500 # Protein_GI_number: 15643290 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Thermotoga maritima # 2 246 5 252 254 133 31.0 4e-31 MIITTSLRENEALIARAQELAYELGADYQPRRKLSLAKCLERFGAFYLLYEDRLSFVNVN GSELSFHPDTAVLRIKAPHDALISLLGQSPKSILDTTMGLASDSLVMTAVGNRVTALESQ EVIFQVVSRGLATYQTDDKRLEKAMRSIKAIKSDSLSFLKSQADHSFDIIYADPMFSETI KESENLQAIKPLANGSRLTEEWLDEAKRVAREKIIIKAHFRDPIFEELGFERQVRPNQKL HYGFMYLKGGH >gi|311100154|gb|AEKO01000011.1| GENE 167 169667 - 170692 927 341 aa, chain + ## HITS:1 COG:SPy0836 KEGG:ns NR:ns ## COG: SPy0836 COG0845 # Protein_GI_number: 15674871 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Streptococcus pyogenes M1 GAS # 2 339 69 419 423 255 50.0 9e-68 MVKAQSEQYVYFDNTIGRNATVTVSVGEEVSVGQQLVQYDSTSAQAAYDTASRAYNKAVR DRNYFQQYGTAPSASAQTSSDSDEDDSTTTVSPQQRQQTEVSNYQTLQDYNDAIANAASE LEKAQDVLNQTVIVSDANGTVVEVADSVDPASKESQTLVHVTSEGQFEIQGTLTEYDIPN ISVGQKVKITSKVYPDQTWTGKVSYVSNYPKQNASQSGSQYEYKVQLTSPIGKLKQGFNV SLEVTKDDDALLVPVTAVSKKGSDNYVWVYDDKTQKIKQVKVKLGNADAKQQEIASGLKE GQKVITKAEKSFKDGETLKNVTDARGKKSKDTSGEEVKSID >gi|311100154|gb|AEKO01000011.1| GENE 168 170703 - 171389 335 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 222 5 219 311 133 35 5e-30 MVLKGITKSFKNGQESLQVLKGIDLSVEEGDFVAIMGPSGSGKSTLMNIIGLLDQPTTGS YQLEGEDVADLSENRLAKVRNDQIGFIFQQFFLLPKLSAQRNVELPLIYAGKSPRERKQR AEQFLEKVGLSDRSHHLPSELSGGQKQRVAIARALSNDPAIILADEPTGALDTKTGNQIM ELLTQLNREGKTIVMVTHEPEIADYARRKIVIRDGEITQDTTDSVRID >gi|311100154|gb|AEKO01000011.1| GENE 169 171399 - 172607 369 402 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 2 402 7 413 413 146 28 6e-34 MENWKFALSSIRSHKMRSFLTMLGIIIGVAAVVLIMGLGNGMRQSVTDSVTGDKDTVQVY YEAKGEELDPAYADLSQPTKPVKEVWLEQVARQTPGIDSYFVTNSLTSSISLQKKTVKNV NITGASQGYFKAKKLEMLTGRSLKDNDYKNFSRVIVIDQMVAKKLFRTNEDALNQVVTIG NNDYRVIGVYKNKDTAIGASGEIGTALVANTQLAAENNTDPIGQIFFHVTDVKNSSSVAK DAAKRLTQLSQVDNGEYKAADMSSALDQVNTIFGTITTVVGAIAGISLLVGGIGVMNIML VSVTERTREIGLRKALGATRRKILTQFLIESMVLTILGGLIGLGFAALVVGPIGSAMNLK ATVSLSVAMGSIAFSAAVGIIFGLLPANKASKLDPIEALRYD >gi|311100154|gb|AEKO01000011.1| GENE 170 172900 - 173403 775 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228478274|ref|ZP_04062882.1| 50S ribosomal protein L10 [Streptococcus salivarius SK126] # 1 167 1 167 167 303 98 5e-81 MSEAIIAKKAEQVAIVAEKMKAAASIVVVDSRGLTVDQDTVLRRNLRESGVEFKVIKNSI LSRAAEEAGLEDLKELFVGPSAVAFSNEDVIAPAKVISEFAKDAEALEIKGGVVDGAFTS VEEINALASLPNKEGMLSMLLSVLQAPVRNVAYAVKAVAESKEDGAA >gi|311100154|gb|AEKO01000011.1| GENE 171 173462 - 173845 580 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|81559695|sp|Q5M0W4|RL7_STRT1 RecName: Full=50S ribosomal protein L7/L12 # 1 127 1 127 127 228 96 2e-58 MEEITMALNIENIIAEIKEASILELNDLVKAIEEEFGVTAAAPVAAAAAGGADAGAAKDS FDVELTSAGDKKVGVIKVVREITGEGLKEAKAIVDGAPSVLKEGVAAAEAEEIKAKLEEA GASVTLK >gi|311100154|gb|AEKO01000011.1| GENE 172 174637 - 181530 7754 2297 aa, chain + ## HITS:1 COG:no KEGG:SGO_1148 NR:ns ## KEGG: SGO_1148 # Name: cshB # Def: surface-associated protein CshB # Organism: S.gordonii # Pathway: not_defined # 1213 1970 798 1506 2292 399 43.0 1e-109 MKGKQQQDFRVEKYIRYGIRKYSFGAASVAIAAGLMFLGNGAVSASETSVNGNTADSSVV ASNPENDGTSTKAETPVTEKEVKAEEPKKEDTSVQKEAEEKTPTEAPKANTEKTAEKVAA NKTALYEAISSLENRIAVAKNADASALSAAKEALATAKSVFANPTDGQSEVDSQTEALKA LATVLVESNAAETAKKEEAANQNQDNPTVDTKVLNQTLSEAEVTNQLAYSEMNKKDLSDE SKGAIEAAIAKNKVVLAETTKLLADKSLTQEQVDAQLNRLNESIQAVYDELKRNGIGQDG KFAVALSANEGYTASSTELRKENGEFLGSTGKSYKVLDGNDNYKIYVHGYQSENTDVPAA NSGQAGISGRTDIPLSKTEAQKLGREAALWKGKIRATGKANGNTTWGSGGAYEYIATEIY GYTYEQGNHYVYLTDVKKRFSLSDEATAAGYKITNVALSNLIPGLAYNEATDTVEGYVAS SLQNGVYDMRYIVTVEKDGATQQVTFRDLTAGWIGWQDTSAPLIQGSSKLVTVGDEVSHN IKYVDNDGMSRDERTGYVYRSNGEKVVAGSKTAPGSTSGATFTAVDGSKVNTENGPQTVT AHTSLNGNYTGSQTSINDVVPGLNYNPQTGDITGTASEAGIFTAAVYAKDYNNTTNAKNQ DWNMYGQEAHENITIAVAPKITVKNVEAYATNIPVTISNGANKAEITMPDGTVTKLVAKN GNWVVAAGTTNTAVQEGAVLAPVATSGESTINLTVTPKSTKYVGVDNIAAKATTDKVKAN IQREFAMVTDAAGNTYKAVFNHATGKYSLPTEKAYELKDNGNGTSTLIERRVYTDAQANG DVKFVVYEFERTWNTTSSASTLEDKIAEIRKNGEVTAVGNVTRTETLIKKDNTSSEQGMV VTVSYDSVTNQWTSSDGTAVTAKESNAGWEIETASGFKGYVSYREASSTDVASIQNAKPT GTSTSYSEAKGTSVDLIKSTKANVAFADTIDDKTSATDSDTIKTKVTATAPDGSVTTFDG AQAEETAYIQAQRTAAAKTQAAATAVKEQQDTQNELARLQELLDRQTRVVEDAQKALDDL KLRTISPTAQELAERKLANSKEFKASIEEQLATAKANLTTKTTEVETARTAALEAEKAVE TARTALKTAAESNLAKANAYVLSQKGRYKVTARAVDSNGVVTTPTVDGTDAGEVTEDAVA ETTYYIVVTEPEKSSGAQAQKQTDSMADNFNDGKEGTTVSNYKLVDPKTGAKVESLTTEE GTYTVDPTTGEVSFTPAEGFVGTAAPITVAADVTFNDESGNPVTVPVSNTYTPTVYGIDP ADDETTGKQGQTQTSISGKERFEELNTATNTPDGTNVDWTTAAYSLEGANAEGKVVVDGE GTYSIDPTTGVVTFEPLPTFTGKAKGVNVQVSVTATDSEGNKVPVTSKGSYTPEVTPVKP TGEGVTSSGKQGQEQTGTPKFTQGDETAPITINEQQPAKFVVNGQPVEDKEIPATKDGKE VGKYVIDPLTGVVTFKPNKDFVGTPDPATVEVKDKNGTPATATYTPTVTPVTPTAEPKET TGKQGQPQTQDTESMFKQGDEVAPIDKTTVKLVDPSGNEVTTMPALKDGKEVGTYTIDPT TGVITFQPNKDFVGTPDPAKVVAKDTNGTKVETTYTPTVTPVTPTAEPKETTGKQGQPQT QDTESMFKQGDEVAPIDKTTVKLVDPSGNEVTTMPALKDGKEVGTYTIDPTTGVITFQPN KDFVGTPDPAKVVAKDTNGTKVETTYTPTVTPVTPTAEPAETTDIQGKTQNGTPTFTPGN PEVPMDDEVPATFEDGSTTKTIPGEGTYTVAKDGTVIFTPEKTFTGVGTGVTVKRVDKNG TPVTAKYTPTVTPVKPEGTPAVSEGPKGQPQTGTPTFTPGNPNVPIDEDVPPTFEDGTTT KIVPGEGTYTIDENGKVTFTPEPDFVGKASGVTVKRVDKNGTPVTATYTPTVRPDTSFVD KDGNPLSLTEDGTKPTKDIPGYKIVKTEVDEKGNTKHIYEKVTTTHKDKDGNVIPGTTTE EGTTPKKDIPGYRFVETKTLPNGDTEHVYEKVKTSHKDKDGNEIPNYPTEDGEQPKKDIP GYRFVETKTLPNGDIEHVYEKVKTSHKDKDGNEIPNYPTEDGEQPKKDIPGYRFVETKKL PNGDIEHVYEKVSTPAPTPSPVPQPTPGKQNTTTWTDENGNPLKPTESGSKEPGTVSGYE YVKTVTDPNGNIKHIFKKVEMPTPRPVEPSQPATPKYVEGQKELPNTGTEDNNSLVALGL LGVLSGFGLVARKKKED >gi|311100154|gb|AEKO01000011.1| GENE 173 181922 - 188740 8170 2272 aa, chain + ## HITS:1 COG:no KEGG:SGO_1148 NR:ns ## KEGG: SGO_1148 # Name: cshB # Def: surface-associated protein CshB # Organism: S.gordonii # Pathway: not_defined # 170 1895 35 1607 2292 772 38.0 0 MQGKQQDFRAEKYIRYGIRKYSFGAASVAIAAGLMFLGNGVVSATEVQSAETAITTSASS QGDKETEKAEPKAETVETAKPETVNTETVNPETEKATEVKPEVKVEDTKKVNKAILEASI ATLESKLSTAKYADATVVNSAKEVLATAKATLAKGDASQADVDAQAETVSALSTVVTESN TAGFDKKQASEEEVAKAEAEKKATPAEKDLSVAKTTLTQVSSEAEVTNKLAETELAKADV KEENKAAVTEAVAKNKEVIAKTKTLLADKSVTKEQVDAQLERLNESILAVYNELKNAGIG RDGKFSVNLADAQTTALKDASTETGKKWLEDHGYSSLSDIKVKTKEDNLKEIKDLNDQIQ WLDFGDTNAWTGLNANNQLQIGSTYTKELIPGYIVTMKVKELKPFESTEIFKNRVAGTDL ESSYQPDKENKFNPENGATGLGANPQNQWTHVANSGLTTGNAKTTIAGTNPAGQPKNGQA AGVKFEVTATYNGKAVKPGIVMTSGEDVGPLESEIYTTDGTPWDLAAIVGYKTNKNAYRP LDQFKDMNGGKTAVLKWQDEKFYNALSGGKFATPDAATAGLGSQVFGGALNQNGSGTAIL STANVTEVGLYIMSSGQQSSMIGIKFSDFGDLPESYGMAEHYLRTQSIDYDTKAIKQIQQ PYLGKVKADIDSAPGTRVVGVDSDDAKDNADEGVDQLIAPDNFKQNKDTGLPEVQLVKAP DNTYKVKVIASANGNDKYTDTVAPAYVRGFIDFNGNGKFDKGEESNIATVTGNGQEVELT FTNTQVIDTSKDVVNFRVRIAKDEDQVEKATGIAYSGEVEDNQIRVSHPPRGDYEETTGK QGEKQNIGIEFVNRVEADASELGSNNGKTTFNAYGKIDYTEQRNSISLASTKKVQTEGVM IVKPDGTLAKTYTKEGQGTYEVTDTGVTFTPEANFVGKADGIVLRAVDANGQSTGWTSLT DQHGLVNINDGTHTTTTKTMDAVYVPNVTPKEITADPETSTDVQGKAQKKTPTFKTDAGT DNAATVTPSATYPAKLVDPKTGAKVDSVTVDGEGTYTINPTTGEVTFQPLPTFKGTATGV DVTLTAPVGQNKDGQDVTATATTKYTPTVTAVEPTAKPADSAGVQGETQKGTPTFTAGNA EVPIKENSVKLLNPDGTEANGPVDALDEKGNKVGEYTVNPATGEVTFTPTDKTYTGKVTP AKVQAEDKNGTKVNTTYTPHIVGVTPTATPAESSGIQGEVQDGTVTFAPGETTVEGVKKS VPIKANSAVLLDASGNPVVPGTPVDALDPEGNKVGEYTIDPATNKVTFTPTNKAYKGKVQ PVNVQAEDENGTKVSTTYTPTIVGVTPTADPAKSVDVQGATQTGKPVFQGGTAMVNGEEK IVEIDEDKPAKLVDPKTGEQVDSVTVEGEGTYTVAPDGTVTFKPEPQFTGVAKGVEVVRQ DKNGTPVKASYTPEVKPVTPTGTDTVTEDIQGSTQTGKPEFKGGTVTIDGKEKTVEINED KPAKLVDPKTGDPVDSVTIEGEGTYTVAPDGTVTFTPEKNFTGKGTGVTVQREDKNGTPV TAKYTPVVKKATPTGTDAVTEDIQGSTQTGKPTFEGGKVTVNGEEKTVEINEDKPAKLVD PKTGDPVDSVTIEGEGTYTVAPDGTVTFTPEKNFTGKGTGVTVQREDKNGTPVKATYTPV VKPATPTSSDVITTNVQGATQSGTPTFEGGKVTVNGEEKTVEIDETVKPTFDDGTTEKQV PGEGTYTIDENGTVTFTPEKTFTGQATGVTVKRVDKNGTPITAKYTPVVVPVTPTSKDSE SEGPKGQPQSGTPTFEGGKVTINGKEVPVEIDETVKPTFDDGTTEKKVPGEGTYTIDENG KVTFTPEPDFVGKASGVTVKRIDKNGTPVTATYTPTVRPDTSFVDKDGNPLSPTEDGTKP TKDIPGYKIIKTEVDEKGNTKHIYEKVTTTHKDKDGNVIPGTTTEEGTTPKKDIPGYRFV ETKKLPNGDIEHVYEKVKTSHKDKDGNEIPNYPTEDGEQPKKDIPGYRFVETKKLPNGDI EHVYEKVKTSHKDKDGNEIPNYPTEDGEQPKKDIPGYRFVETKKLPNGDIEHVYEKVKTS HKDKDGNEIPNYPTEDGEQPKKDIPGYRFVETKKLPNGDIEHVYEKVSTPAPTPSPVPQP TPGKQNTTTWTDENGNPLKPTESGSKEPGTVSGYEYVKTVTDPNGNIKHIFKKVEMPTPR PVEPSQPATPKYVEGQKELPNTGTEDNANLAALGLLGVLSGFGLVARKKKED