Prediction of potential genes in microbial genomes Time: Sun May 29 19:01:24 2011 Seq name: gi|319806062|gb|ADMF01000001.1| Sutterella wadsworthensis 3_1_45B cont1.1, whole genome shotgun sequence Length of sequence - 104955 bp Number of predicted genes - 80, with homology - 70 Number of transcription units - 36, operones - 16 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 114 - 431 290 ## Ppha_1041 transposase IS4 family protein 2 1 Op 2 . + CDS 473 - 778 357 ## 3 2 Op 1 6/0.000 + CDS 898 - 1863 930 ## COG3745 Flp pilus assembly protein CpaB 4 2 Op 2 . + CDS 1883 - 3475 1579 ## COG4964 Flp pilus assembly protein, secretin CpaC 5 2 Op 3 . + CDS 3485 - 4315 970 ## ECA0790 putative lipoprotein 6 2 Op 4 . + CDS 4318 - 5601 1371 ## Mmwyl1_0308 response regulator receiver protein 7 2 Op 5 8/0.000 + CDS 5651 - 7135 1518 ## COG4962 Flp pilus assembly protein, ATPase CpaF 8 2 Op 6 9/0.000 + CDS 7149 - 8129 1287 ## COG4965 Flp pilus assembly protein TadB 9 2 Op 7 . + CDS 8140 - 9051 987 ## COG2064 Flp pilus assembly protein TadC 10 2 Op 8 . + CDS 9067 - 10215 976 ## Dd1591_2048 tetratricopeptide TPR_2 repeat protein 11 2 Op 9 . + CDS 10216 - 10770 719 ## ECA0796 hypothetical protein 12 2 Op 10 . + CDS 10772 - 11419 737 ## Dd1591_2050 hypothetical protein 13 2 Op 11 . + CDS 11416 - 13005 1579 ## ECA0798 hypothetical protein 14 2 Op 12 . + CDS 13041 - 19235 4864 ## COG2931 RTX toxins and related Ca2+-binding proteins 15 2 Op 13 . + CDS 19331 - 21025 2234 ## ECA0800 hypothetical protein 16 2 Op 14 7/0.000 + CDS 21088 - 21870 726 ## COG0845 Membrane-fusion protein 17 2 Op 15 . + CDS 21867 - 23393 1403 ## COG0845 Membrane-fusion protein 18 2 Op 16 . + CDS 23427 - 25658 1670 ## PC1_0681 hypothetical protein 19 3 Tu 1 . - CDS 25687 - 26733 725 ## COG0583 Transcriptional regulator 20 4 Tu 1 . + CDS 27151 - 28977 2491 ## SeAg_B4211 arylsulfotransferase + Term 29012 - 29053 9.4 - Term 29000 - 29041 8.6 21 5 Tu 1 . - CDS 29089 - 29259 224 ## - Prom 29423 - 29482 2.0 + Prom 29343 - 29402 4.2 22 6 Tu 1 . + CDS 29602 - 32178 2208 ## COG3468 Type V secretory pathway, adhesin AidA + Term 32199 - 32243 8.2 - Term 31989 - 32023 -0.6 23 7 Tu 1 . - CDS 32204 - 32404 111 ## - Prom 32462 - 32521 1.6 + Prom 32258 - 32317 2.5 24 8 Op 1 21/0.000 + CDS 32385 - 33374 403 ## PROTEIN SUPPORTED gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 + Term 33388 - 33433 5.1 25 8 Op 2 17/0.000 + CDS 33458 - 35131 1926 ## COG1178 ABC-type Fe3+ transport system, permease component 26 8 Op 3 . + CDS 35134 - 36222 1313 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components + Term 36250 - 36295 12.4 - Term 36237 - 36281 12.2 27 9 Op 1 4/0.000 - CDS 36311 - 37372 1273 ## COG0309 Hydrogenase maturation factor 28 9 Op 2 13/0.000 - CDS 37420 - 38559 1083 ## COG0409 Hydrogenase maturation factor 29 9 Op 3 1/0.111 - CDS 38556 - 38840 407 ## COG0298 Hydrogenase maturation factor 30 9 Op 4 2/0.000 - CDS 38883 - 41420 2302 ## COG0068 Hydrogenase maturation factor 31 9 Op 5 11/0.000 - CDS 41511 - 42383 905 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 32 9 Op 6 . - CDS 42523 - 42891 448 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 33 9 Op 7 . - CDS 42884 - 44413 1199 ## Slit_2426 putative hydrogenase expression/formation protein HupK 34 9 Op 8 . - CDS 44410 - 45183 653 ## Rfer_4094 hypothetical protein - Prom 45389 - 45448 4.5 35 10 Tu 1 . + CDS 45077 - 45358 104 ## 36 11 Tu 1 . + CDS 45545 - 45784 123 ## - Term 45455 - 45504 2.0 37 12 Tu 1 . - CDS 45729 - 46001 130 ## 38 13 Op 1 11/0.000 + CDS 45876 - 46970 1525 ## COG1740 Ni,Fe-hydrogenase I small subunit 39 13 Op 2 8/0.000 + CDS 46970 - 48733 2215 ## COG0374 Ni,Fe-hydrogenase I large subunit 40 13 Op 3 . + CDS 48749 - 49468 876 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit + Term 49492 - 49542 11.2 41 14 Tu 1 . - CDS 49465 - 49665 190 ## - Prom 49838 - 49897 3.3 + Prom 49638 - 49697 3.9 42 15 Tu 1 . + CDS 49749 - 51287 1103 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Prom 51514 - 51573 5.6 43 16 Tu 1 . + CDS 51643 - 52134 570 ## COG1846 Transcriptional regulators - Term 52202 - 52240 9.0 44 17 Op 1 2/0.000 - CDS 52271 - 53455 1295 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 45 17 Op 2 8/0.000 - CDS 53517 - 54350 682 ## COG0500 SAM-dependent methyltransferases 46 17 Op 3 35/0.000 - CDS 54370 - 55212 721 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 47 17 Op 4 . - CDS 55212 - 56213 1078 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component - Prom 56315 - 56374 5.5 + Prom 56277 - 56336 2.4 48 18 Tu 1 . + CDS 56551 - 56937 309 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 56964 - 57009 5.2 - Term 56952 - 56996 11.3 49 19 Tu 1 . - CDS 57060 - 58598 2379 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 58655 - 58714 1.5 - Term 58804 - 58849 12.6 50 20 Op 1 . - CDS 58924 - 60096 981 ## COG3203 Outer membrane protein (porin) 51 20 Op 2 . - CDS 60394 - 62280 2673 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 62369 - 62428 2.8 + Prom 62405 - 62464 2.4 52 21 Tu 1 . + CDS 62530 - 63420 723 ## COG0583 Transcriptional regulator + Term 63572 - 63608 1.9 + Prom 63527 - 63586 2.2 53 22 Op 1 . + CDS 63659 - 63925 261 ## 54 22 Op 2 . + CDS 63925 - 64350 414 ## COG1487 Predicted nucleic acid-binding protein, contains PIN domain + Term 64410 - 64464 15.3 55 23 Op 1 35/0.000 - CDS 64453 - 65040 645 ## COG0512 Anthranilate/para-aminobenzoate synthases component II 56 23 Op 2 . - CDS 65077 - 66597 1647 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 66618 - 66677 1.5 57 24 Op 1 5/0.000 - CDS 67009 - 68943 1736 ## COG0169 Shikimate 5-dehydrogenase 58 24 Op 2 5/0.000 - CDS 68940 - 70106 964 ## COG0082 Chorismate synthase 59 24 Op 3 3/0.000 - CDS 70114 - 71508 1154 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 60 24 Op 4 3/0.000 - CDS 71558 - 72685 1016 ## COG0337 3-dehydroquinate synthetase 61 24 Op 5 . - CDS 72682 - 73752 1277 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Term 73952 - 73993 6.8 62 25 Tu 1 . - CDS 74229 - 75167 999 ## COG1897 Homoserine trans-succinylase + Prom 75433 - 75492 2.2 63 26 Tu 1 . + CDS 75551 - 76822 1315 ## COG3069 C4-dicarboxylate transporter 64 27 Op 1 . - CDS 76905 - 77816 707 ## CV_2077 hypothetical protein - Term 77824 - 77885 1.3 65 27 Op 2 . - CDS 77908 - 79440 1562 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 79560 - 79619 1.8 + Prom 79531 - 79590 2.8 66 28 Op 1 . + CDS 79773 - 81461 1623 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 81611 - 81670 1.5 67 28 Op 2 . + CDS 81703 - 83529 2411 ## Gmet_1382 arylsulfotransferase + Term 83563 - 83609 13.0 - Term 83549 - 83596 9.9 68 29 Tu 1 . - CDS 83606 - 84586 425 ## COG0583 Transcriptional regulator - Prom 84685 - 84744 5.7 69 30 Tu 1 . - CDS 84789 - 87260 2217 ## COG3468 Type V secretory pathway, adhesin AidA - Term 88078 - 88122 9.2 70 31 Op 1 . - CDS 88151 - 90871 2398 ## COG3383 Uncharacterized anaerobic dehydrogenase 71 31 Op 2 . - CDS 90864 - 92732 1849 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases - Prom 92817 - 92876 2.5 + Prom 93162 - 93221 2.0 72 32 Op 1 3/0.000 + CDS 93308 - 93667 538 ## COG5569 Uncharacterized conserved protein + Term 93724 - 93781 3.0 73 32 Op 2 11/0.000 + CDS 93892 - 95670 1534 ## COG0845 Membrane-fusion protein 74 32 Op 3 . + CDS 95667 - 98804 3804 ## COG3696 Putative silver efflux pump + Term 98829 - 98872 13.1 75 33 Op 1 . + CDS 99428 - 100372 308 ## COG3344 Retron-type reverse transcriptase 76 33 Op 2 . + CDS 100375 - 100671 147 ## Dret_0152 RNA-directed DNA polymerase (reverse transcriptase) - Term 100907 - 100950 7.1 77 34 Tu 1 . - CDS 101029 - 102150 1285 ## COG3203 Outer membrane protein (porin) - Prom 102371 - 102430 3.1 78 35 Tu 1 . + CDS 102173 - 102307 84 ## + Prom 102644 - 102703 4.6 79 36 Op 1 . + CDS 102831 - 104489 1071 ## + Term 104492 - 104532 7.5 + Prom 104495 - 104554 3.6 80 36 Op 2 . + CDS 104575 - 104953 146 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319806062|gb|ADMF01000001.1| GENE 1 114 - 431 290 105 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 3 98 471 564 570 74 36.0 9e-13 MTSVRGKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMT LKQLLDWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD >gi|319806062|gb|ADMF01000001.1| GENE 2 473 - 778 357 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAGDVKLAAVLSFWAGSDALLFLILLSLVGGLMVLGLPLLRMIETKTGFWAERLAEAFG RPLECTPIGLLGGEAQKGLPYGLAIAAGFAAVQFGVFSHIF >gi|319806062|gb|ADMF01000001.1| GENE 3 898 - 1863 930 321 aa, chain + ## HITS:1 COG:CC2946 KEGG:ns NR:ns ## COG: CC2946 COG3745 # Protein_GI_number: 16127176 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein CpaB # Organism: Caulobacter vibrioides # 99 287 120 277 297 70 34.0 5e-12 MKIKTSSLLLLGFAVVLAGCAAFVARGLLAPHAAERPAAAAQAKASEAQVPPVWAAAAAK PVEPGEFLSGTAIKWVEMKADEAPASAISAKRPGDRTAAALLMGATVRRSVPQGELITQD DVLYPGNPGFLAAVLSPGKRAVSIPTSAVSSNSGLVSAGDWVDVILTLKRETAEAMADQQ DKTSGMTKLAAQTILTNVRVLALNNSTESIAPQPETAPQKTDAKKTASTAARRVDYRTIT LEVTPMEAQALAVAKEAGDLQVSIRGLREPETKDAAGTSAVNEKTAAVTHLQDATGILGT QRPAAKTVITYQGAAVAPVTF >gi|319806062|gb|ADMF01000001.1| GENE 4 1883 - 3475 1579 530 aa, chain + ## HITS:1 COG:mlr6335 KEGG:ns NR:ns ## COG: mlr6335 COG4964 # Protein_GI_number: 13475294 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, secretin CpaC # Organism: Mesorhizobium loti # 83 503 25 387 432 207 36.0 3e-53 MQIPHLEDSVSRSSRLTQNRKPSRTVFAAACLGALLGLAVSPASAALKAQVPTDVKVLEG ASSLKNLKLAKPTSSLRVFLKEGALLQLPSAAAKVLVATPGIASYQMPSPDQVFFFGTAA GSTTFYALDEAGAVIAAVQVTVEHNLEKLKADIKRAVPSASIELVPALNNRMIVRGKVKT ALDSRRVTQLVESYLVSSAAAGGPGQGSQQGGQDGGGQGGSAGGQSSPVINQLKVEVSQQ VNIQVRVVEVSRSLTHSLGFNWGAVLNTGRGPLFLGNGTSQGLFSTHAANNSHFNPNDSF ADGNANIPGLMPDSNTAGAALGGIFNMGRMSLGVLINAMSESGFASLLAEPNLTAMSGQP AAFASGGEVPIVIITGNSITIDYKSWGVILRMTPTVLSPNRIAIHVAPEVSELTSEGQVI LSEGSVIPAVRVRRAETTVELASGQSFALAGMLRSESSQTVNGVPGLRNLPFVGRLFEYE QTQVEDSELVILLTANIVDPVSSGDLRVPGRGINAVDAYAPRQASIGYLF >gi|319806062|gb|ADMF01000001.1| GENE 5 3485 - 4315 970 276 aa, chain + ## HITS:1 COG:no KEGG:ECA0790 NR:ns ## KEGG: ECA0790 # Name: not_defined # Def: putative lipoprotein # Organism: E.carotovora # Pathway: not_defined # 74 275 34 228 228 140 38.0 4e-32 MRMKDMTHNNNQRRFSLKTQARKGTAVLLSIALIAALTGCESLSYMGNAVQTAGGYAFDK AEAGYRAVEGLETKTVGRVRSSNFAQTRDEALSMKVQAKSLYLRASANGSGLTDESIESA NKFLLSQGPIRRQVLTVVPLSERGEKLARRLAEALEEAGAQEPKLAVYVNEKTGKRDFPD RRVSWDLELISEAYVVHAPECEVADPTRWTIEPYEAVGTLGCANNANIAMMVSDPKDLLR PRALEGADGTASNLAVQKYQTGDQEDLIDIDFSQED >gi|319806062|gb|ADMF01000001.1| GENE 6 4318 - 5601 1371 427 aa, chain + ## HITS:1 COG:no KEGG:Mmwyl1_0308 NR:ns ## KEGG: Mmwyl1_0308 # Name: not_defined # Def: response regulator receiver protein # Organism: Marinomonas_MWYL1 # Pathway: not_defined # 17 387 16 380 414 251 40.0 3e-65 MDKENENNASVEGITTAVFCREGDLKQFTDVFARLGRSCTAAQKGGMDEAQAWLTQHDAP GLLIVDISASPFPVPALADLAALAGPGCRIVAVGAEENVELYRSLLSAGAFDYLVSPVAD ALVVELLNRADSDRWLGMPDASSVRVGQTIAVTGAAGGAGTSTVAALLGRWIAEAAKYPT LLVDFDRRKGDLALLLGLKADNGLAGILSAAEIDYRLIARTVLADGEKKRLSLLAQRPGP ETPVDPQLLLQLGGALCELFSVSIWDIPSHRPAGSAEILKNADVCVILIDYTVSNARAAK ILLAELGAPQPGQRRFLVANACRAGAGKRSKPVLTREEFENFLGVKVDFELPNAGTVLDA SLLHGALTSQAAPAFARSIEALACGLLGRAGAHSAAPGFAERYFPTVMKLLKLLKLTGNK DSAKAAA >gi|319806062|gb|ADMF01000001.1| GENE 7 5651 - 7135 1518 494 aa, chain + ## HITS:1 COG:RSc0652 KEGG:ns NR:ns ## COG: RSc0652 COG4962 # Protein_GI_number: 17545371 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Ralstonia solanacearum # 67 485 14 431 453 396 51.0 1e-110 MLVGTRRPIPAAAPAPRPAQEVRQAGTVLGTAQPGVETPPAAMPSRPSFAAASNAGSAAV RRPGMRSMPQSAAAAPQAQAQASAELARVRRTIHDQVFAQIDPMKAATTSRENLAEQVAQ LIREICDQNRFQLTAAEEQAISAQMLDEMLGIGPIEPLLADETVTDILVNGADKVFVERF GKLELTPITFIDEEHVFNIAQRIAARVGRRIDEANPMVDARLADGSRVNVVTKPLALDGT SISIRKFSKHKRNLEELSEGGALTKEMVELLSRAVMARLNIVVSGGTGAGKTTLLNALSF KIGQKERVVTIEDAAELQLNQEDIVRLETRPESIEGGGQITQRDLVKNALRMRPDRIILG EVRGGECFDMLQAMNTGHDGSLCTVHANNARDALIRLENMVLMANLQLPLNAIRRQIGGA VNMVVQIERMRDGKRRVVSIVEVCGMEEDVIQTQELYNYRIKSISADGRIVGEFVNTGLR PKFYQDRAHLFGGN >gi|319806062|gb|ADMF01000001.1| GENE 8 7149 - 8129 1287 326 aa, chain + ## HITS:1 COG:CC2941 KEGG:ns NR:ns ## COG: CC2941 COG4965 # Protein_GI_number: 16127171 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Caulobacter vibrioides # 11 322 2 321 325 103 26.0 5e-22 MLNLFTILVFLFVLLGVLGLRAFTNRARREEMVRERLTELLTQVEEEAKSVAPVEYPDES VLMGLDDYHGHFPRLHARIVRIQKGLELLGWTKNLRLRVLVLGALSFTAAALVGRMTDYP FLIAFFGGAALFASAAALLYLRAMGEWTEELGKSLPEAIDSIARICRAGVPAQTAFGLAA QNLRGALSEELRTIDRWLRLGVPLKQVLQESAHRVPLPEYRFFAVIVIISQESGGRLADT LERLAATLRERAELALKVQAKTSEARASIKIVACLVPGVLIYQYIQAPQDFQFLVTDPTG LKVLGYAAASVAAGLFVTWLMVRRIQ >gi|319806062|gb|ADMF01000001.1| GENE 9 8140 - 9051 987 303 aa, chain + ## HITS:1 COG:AGc371 KEGG:ns NR:ns ## COG: AGc371 COG2064 # Protein_GI_number: 15887568 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadC # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 63 297 86 324 328 122 33.0 7e-28 MITWIIVFALALLSIVVFVFALRSQQDAEALEDRLAGTIDEEAAAHPHQAGGIEPLPEWI QPVARFGLKLAGNDKSRETTALLLAQAGFARPGSLGVFLLLKTLLGLGIAAALFFGTQER SIGTIALMGAGYFAGGILPEWVLKSMAARRYTALERSMPDALDLMVICAEAGLPFTRIVK VVSRELELSAPVLAHELTLTNAELEIMPERSAALRNLAERTRVPSIEGMVSTLIQAEQFG TPLAQALHNIAAESRSTLILTLEERAGKLPARLSLPLMTLILPPVVAIVAAPALMRVIRS LLS >gi|319806062|gb|ADMF01000001.1| GENE 10 9067 - 10215 976 382 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_2048 NR:ns ## KEGG: Dd1591_2048 # Name: not_defined # Def: tetratricopeptide TPR_2 repeat protein # Organism: D.zeae # Pathway: not_defined # 64 302 34 265 283 119 31.0 2e-25 MTTSAHSSCRGPQAAMKTAALFALWVAALMLSGCASLAGAGSDSPMPERTIKERTPSEVV TAPKKDRESALRLARMLVAQGRYEGALGVYAELDRRGGMDAKTLLEYAGIASLIEPPRAT LTLFTRTKALAEAEKVQFSPAEEAGLLTGLGRAYMASARMSDARSALERAVELDDKNVSA LNAYGIVLDAAGEHEEAVKYFDKALAQSPTNVQVLNNLALAKLGMNDAKGALKVLGDAEN FSSSDASGVLTPKMNLAFVQFMTGSADRSRETLQSFMTNEQAEEALKKFAAMKSRIDAGE STLADECLRAAEKMIEIRPKSADDSDYGYEVPLVVEPVKTIETNGGAGLSSHAQTFPKGS PEAAAALEALKKGSAGQNGSKP >gi|319806062|gb|ADMF01000001.1| GENE 11 10216 - 10770 719 184 aa, chain + ## HITS:1 COG:no KEGG:ECA0796 NR:ns ## KEGG: ECA0796 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 19 171 24 174 182 86 36.0 5e-16 MTVGIFRSRIFTAGRAFLRDGRGVSAVETAFAFPVILAAFFIIVEFANMALTIQVGESAV SSALLRFRDAGELGASAENDIRQGIAAYSFGYLKPSNVSRVTVEAYESLDALGNPGGTNG AGEDDEEGTAEADSSYPAWKVVVVISKDFITPLPRLILTNRKDFTYRYERVIAYYPRIEE SEGA >gi|319806062|gb|ADMF01000001.1| GENE 12 10772 - 11419 737 215 aa, chain + ## HITS:1 COG:no KEGG:Dd1591_2050 NR:ns ## KEGG: Dd1591_2050 # Name: not_defined # Def: hypothetical protein # Organism: D.zeae # Pathway: not_defined # 22 209 27 207 207 95 35.0 9e-19 MNKISFFKKIAAATAGLRRESGSIAVETALGITFLVSTAVILSDMHQIGIERERLEAGAG SIAVNAAQQPKLTQYGLDALVDASLQTETRDTEVIIMNVLQSGAVQWMIRRGDGAMLCEL NVEGKYFTGELPVDPPENSGEGNDESDVDGSTMSMIVVDVCRRTAGFELGKHLRLPRVIQ VENIYRSNNREIKLDKALEEENLMPSDDDGEGSNA >gi|319806062|gb|ADMF01000001.1| GENE 13 11416 - 13005 1579 529 aa, chain + ## HITS:1 COG:no KEGG:ECA0798 NR:ns ## KEGG: ECA0798 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 13 529 25 543 543 259 35.0 3e-67 MISLLCKRAQLLLARVLREESGSAAVNVVFFLIGGIALTAFVVDATRVSADGARLKQATD AAAQAVAMEAAKDSETDVLGMAQRYVAVNLGLDKEQLSRDLSVAVEPVTWNDYEGYRVSA SFRALPSLLGGPGKTVEVASAAVAIYNPLEIALVVPSTINETQRDMQAIRDIGEAFYDEV IDGRADRWMALVPYSDGVNVWDDAKGVSRIRSWALPDRIEPQWFRYIKQGAGVSNLASPD MPDVRKKILHVRRGMRGGELFDWTEPPGGSFEISAETCYGGNCIMSNYPGGWPYITWRGP VIPSAGNGLTGPTDQRWIAADGTVPLTALLPLTDEREKFTARLQKMIGDHEEINHAINMN IAMGWGAMALSPGFRGIDGWGDLDHPRDFSEDGKSTVKAIVMLANLNGPLIDIDMDANNF YLDLESLGGYADTGDRDFVRQRIEDLCGSFKSHQDFYFYMLIVPPSTNESGLRRYNELKP TLLACGRNSGDVSEVQTTSFAEGKETVIDGLKRIASDLESKSSFARLIE >gi|319806062|gb|ADMF01000001.1| GENE 14 13041 - 19235 4864 2064 aa, chain + ## HITS:1 COG:all7128_2 KEGG:ns NR:ns ## COG: all7128_2 COG2931 # Protein_GI_number: 17233144 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: RTX toxins and related Ca2+-binding proteins # Organism: Nostoc sp. PCC 7120 # 1518 1879 1537 1912 2231 62 25.0 7e-09 MTTANLSYGSLELALEPRMMFDAAAAATAAEVAADAQADANPPVSADPSAGDITVDQNGK PGAQVDLFGNVQAEPLADGKNYDSLTLQVSESGKGLALIVDGKEVLLTQGNKVQIGDPDA DRYATVTVGADGTATVVIKIGSTQNADQLKTLIDGLALKVADGTAQPSADVTVKIDALSY MNDGGTADLDIDRTVKIESSYNFAPEVNVGGTELSGLTNAPGIENATKIFLSDNGNFAFV GDKDGDIAVFKVTDGKLSYLQTFDHSSVDGLGSITDIASSADGRVLYAVSGNNVFRFQVA DNGDLTTEGQKEISGTGTSIAVSSDGTTCYIGYFADYGWGSSYGGTKISYENGQWNDSDI GENASMDFVSCGDYVIKFRNHEFAYGPELKVYGADGEELFSQDLDGIEEGDGVLNITASD NGLIAVQFGGKIQIYQANFAEKTFSKIAETDSSNVVDIALSPAGDRLYVLSSNDSGTLSE FRVTQEGLTPIKTTPAVGGDAAGLVVFDSGKVGIAAGGQVLSYEEAEVHNATLGESVNVG GSLSITDADRDAANSGSGNYGNVSVTFETNDEAKPSTAFEWTGADGYTLENGVIKNGDRT IAAVETADGKIVLTFKDGATTADVAAVVKQVSFTVQSAAADGSVSVKTTVTDNDKSVEKT IQYEFSANQAPSASGSSAVENEYYNTTGMSSPIFKDVAINVGELNQKVSSMELTASGDFA EGEYWVVDGVRIPLNSSSDGTTKSGYAYQYVVADGKGVLTISFDGGIKTGAAQNVVNSMT YVNENAEAQVSERVFALTKVTDNGGADNGGSDSSIIDDVTATIRVHLSVDPDVSVDAPET SDTIFMHDGVITGADYYVNDLAQTPDGKTVFVMSSSGSGGSGTYTFYIYSRGDDGALTLK NSFELGSSPGGYPGSIVVSADGNSVYVKAISGENSFVIGVHGFMADVDGTWSPIEGIDLT SESDSWLDISLDPSGKYFAALTEDTLYLYTVDADGSLKLISQFTRDEMNFADQNLTAIKF SGDGKSIYVQKDSMGEKSGIAVVAVGEDGSLNLLQSLNYETINADESGVKVDDEFMLWKV GSVVSSADGQYLYVYSASAMTTRYVLTFEKNNDGTMTLVQSLTVGADYGFEGESISIQEM HLSSDGKLLFASTEDGKMVEYTVDALSGFLTKAGSIDAGTEGFGKFIVSSDGKNIYFNSG SQGVYSASALPQIPYTGNSAEVGKYLSGVDADVEDYQDFSITIERNGGANTSDGFSFAKT IGYTFADGVITGADGTQLGSYSVEGGKLTITFTGSLNHDVFNTVLGAVKYDVPSDVAGEV VLKVTMIDNVGKSDAQIFSVKATDGSIETPDEETIHVPDPEQPTDFLANVDFSGIKDSIL GHAASITVNVDYPNGTFGLSADSGLTLKDDGYVYSGDVKLGAWSAREGTLSITLEQGVDA DKAEALLKAITFTASGAEPGADLSVDLSIGFTSSSGSSDSLLIDNAVTLQINDGPEFNET KYPDYALSGTLDVALGGSAGSITLPSDLFTDDVKVATVTVELLDENGNVIENGLQKLGLK FENGKLSGTVSKTGAYQLRITAADESGLTASRDVTLTIMENQPPVVVDGNVKVPEVVFNH ETNFSVKDWFKDPNEADELTFTAVKGLPDGLTIDAKTGTISGTPQEVGAFSVTITASDGK NAPVEYTFKLTVRGNQAPQAVPDTAPSVVVGGNNSFELKDFIKDPDGDDLTFRVDGLPDN SGLSFDADTGRIYGTATVTEPFKLTITATDSYGLSNTFEVTVGVRTNSAPEFVGAGSTHE GLPAVFGDTAGGIRADLNTLFKDAEGDGFRVEITEPAELPEGVSFDADTGILKADANFEN GLAVTVKATDAYGASTTRTIWIGTQIAPVTSADAGVANPAFGRGLDLLRDTGLGRGLERE DFRPTVLAADHPVFEPIFGKPAAPLEEPSASERLFALYKQTVDDERDAKLHTEEVRRDRA VERAVEKVERSDKSAARVTLNESAAELPSADLNDVAQKGLAALLDAETPEQSEVADTSLT AAIERHTVYAREGIFAKSDDLAAS >gi|319806062|gb|ADMF01000001.1| GENE 15 19331 - 21025 2234 564 aa, chain + ## HITS:1 COG:no KEGG:ECA0800 NR:ns ## KEGG: ECA0800 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 6 562 36 592 596 416 44.0 1e-114 MSQMKASRMIRLTLVSTSVAAALMLAGCSVIAPEKLSSDDLMRLANVDQQLMFAAQEPVT APITMEEAVARALKYNLEHRLAMMERAVQENIADVQSMSLLPKLTASAGYRDRSNELASS SESLATGKESLVPSKSSERDGRTADLELSWNVLDFGLSYFEAQASTNKSYASEERRRRVV ADIARQTRAAWLSAVSAERLRDEVADALDDASKALAQSKEAGGRGLVKPLDALRYQRDLL NMVRQLETLEDELVKSKAKLATLMNLQPGTPFQLAVPSTDTEAVPAVPYKLSDLEVLAMV RRPEIREESYLARNAVLETRMSLLKLFPNVQLFAGLNYDSNKYLANNDWADVGTQVSWNL MSLFTAPKILKGGELREELAPLRRQAIRMTVLSQVHVAWHQRFAAEKAFRRADELSRVQN SIDKQVENAVKIRSETKLEAVRTKVETLLAKRTRDLSYAEMLNAQDAIYQAAGFDTVPAE VADQSISGLAEAIGAQDRIIADGAVLQGLYGTQALKEGVGDYKEASASYRLNPEVAAAAQ EGGAAVRLVSGMPWESLGSLKASR >gi|319806062|gb|ADMF01000001.1| GENE 16 21088 - 21870 726 260 aa, chain + ## HITS:1 COG:VC1674 KEGG:ns NR:ns ## COG: VC1674 COG0845 # Protein_GI_number: 15641678 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Vibrio cholerae # 26 233 52 263 369 75 25.0 9e-14 MAAALTIGAASAAPAPAAGLSSSSALADAVEFRAQVTAKAQALLSSEMPGEVSSVAFRDG ERFKAGDVLVEYDCALPKARLLRAEAAASAAEGRWRSARELRKLNSISTADYEEARANVG IAAAEAKAERIQVGRCSIKAPFSGMVGETYVRPHEYVGEGQKLLTIYEVSAFEVEAILPA AALKVLRIGSRLTLTLDDTGAVYPVTVSRIAGSVDPVSQSVKVTGELQLPKREKAAGDAG AAALPLLPGMSGRVAWSPAP >gi|319806062|gb|ADMF01000001.1| GENE 17 21867 - 23393 1403 508 aa, chain + ## HITS:1 COG:mlr1394 KEGG:ns NR:ns ## COG: mlr1394 COG0845 # Protein_GI_number: 13471427 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Mesorhizobium loti # 276 464 92 309 430 63 27.0 9e-10 MIIRTKPGAESKKGSAAEGLQELKSAFLKSREQTERLERVIRLCETARAASDRRALGYTA LNDTLAAIDYRQAALWWRAADDAGAGRIEGLSGVADPVRNAAFPAWLVKRLGGFADAHPA GASSLSGSALADELVQPFNVLEHPPAADHDRMMAKEFLPAQALWAELPLKAPQAGGTGIR AALILWRDAPWTGADKAILTHLARAYADAWSAMPLGRSDWSGEGTVKAHSGRLLVWSRKR WVRCAAAAAVVGAMLIPIRQSVLAPAEVTAKNPFAVRAPLSGVVEEIVVKPNAPVKAGDL LVRMDSRDLRGQLEAARQTLSVAEAEYRQGQQQAFFDERSKMALGVLKRRRDQAEADAAF LAGELERTEIRADRSGVAVFSDPQEWLGRPVAVGERILMVADPRAVELEADIPVGDAVAL EKGAEVKFFLNASPTSPLEAELTRVAYRASATADGTLAYKARAEFVQAEGDAPQLGLKGT AKFYGEETFLGLYLLRRPLATLRLWLGV >gi|319806062|gb|ADMF01000001.1| GENE 18 23427 - 25658 1670 743 aa, chain + ## HITS:1 COG:no KEGG:PC1_0681 NR:ns ## KEGG: PC1_0681 # Name: not_defined # Def: hypothetical protein # Organism: P.carotovorum # Pathway: not_defined # 15 743 2 709 709 591 45.0 1e-167 MNALERPPVAPGLSAGHPTPKEPRLPPLREDLRLHEGPDADDGSPTWVLEDPARDQFFQL GVFQAECLKRWHLGTAKAVAAAVGKETLLRPTAETVENFAKFLMRMSLTREAGTSARLAE QMKRKPKQTLWKFFLHHYLFFRIPLVAPDAFLRRTLPWAERLFFTKTFLWATLTALVLAL YLIGRQWDAFTHTFSHFFSWEGAVMAGLTIACTKVIHELAHAYTAEHFGCRIPHMGIAFM VMMPLLYTDTSAAWRLKSKRQRMAVCAAGVLGELALGVWAALAWSFLPEGGLKSAAFMLA TTTWIMTLAINSSPFMRFDGYYLLSDWLGVANLHQRSFALAKWRMRELLFGFGEKKPESF ELWKERALIIYAWATWLYRFFLFCGIALLVYHAFFKLLGIFLFCVEVSVFVMLPILRELK EWALRILKGKAAPRSLWLLFPIAGILAVFFMPWRSEVAAPAVVKPAAAVTLYTPAAAQVE AIEAAQGDAVKKGQVLFRLRSPELTHELEKLESDRASLRWRAEYMRMNREGAADVPAALR ELSALERRIAELKKRTALLEVRSPVDGRVADRTEPLAVGEWLPDGEALAVVAAAAGTDRP ALEIVGYVSEQDINRFAAGASAKFIPEDALQPAIPASVEAVDGTAARHLGAVPELASHFG GAVASLPAPAEAAKSLGVDQGQVFAPKEAIYRVTAAPAGAQQGTAALDLQVRRGTLLIEG ERESLAGRFARAAWSVLLRESNF >gi|319806062|gb|ADMF01000001.1| GENE 19 25687 - 26733 725 348 aa, chain - ## HITS:1 COG:VC0068 KEGG:ns NR:ns ## COG: VC0068 COG0583 # Protein_GI_number: 15640100 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 27 318 25 316 327 96 25.0 7e-20 MLSEESASSACPPLRTLPEDLVESGSIRVLRLLVRLMRDPVLQRSADALGVSAPTASRLL ARARQWFKDPLFIYSAGRMHPTPRMLALSPRIEEELLRLESLFKPEEPFNPATVVRTLRI AAIDNAFHTLLMPFLETAATAAPGLSISVFDRAPTLLEDMRAGTLDLAFYSTEGRPVPSD FCEETLFTSGHVLLMRRGHPLHQKWLAGSEITEADTGAWPHISVVVPMAGGSDRLTMSRH PAHGPERTACETPFFVAGAMLAARTDMLMRIPQETAAELCRTLPLAMMPMEAGIHIPWIP CLFRHRAADHDPLITWVRAQLVSHARRLHAETLRQIDEDFKRRGQQVR >gi|319806062|gb|ADMF01000001.1| GENE 20 27151 - 28977 2491 608 aa, chain + ## HITS:1 COG:no KEGG:SeAg_B4211 NR:ns ## KEGG: SeAg_B4211 # Name: not_defined # Def: arylsulfotransferase # Organism: S.enterica_Agona # Pathway: not_defined # 1 607 1 607 607 687 54.0 0 MKFQRRQLVAAMAGLMLGLSAGAASAMGGPSGAAVGMPAQGHIGEVIVNPYKIAPLTAIV RTGGYVVKNASVRVVPKKGGREIAYKVSDRQIRTHAGIPIAGLYADYLNTVEVSYTRVSA DGKSEDFTDRLQFYAPPVFSISNGMPGQQRMFNVEVNKVDPGFEDRLYLVNSQLIPMAPQ GARFVWNNPAGGALEWTINSQIGIIDTAGDVRWYLLNDLINDQSDPWTSGLMMGFQQTKD GALTWGFGQRWVKYDLMGREIFNRKLPPTYADFSHAYDNAENGHSFLRVSMADYRRGDDK RVHTVRDVIIEVDPDGGVVDDFRLYDILDPYRDTLIKALDQGAVCLNIDPAKAGQTLSAA DLANMDKSDKFGDIPGTGPGRNWAHVNSIDYDPTDDSIILSARHQGIVKIGRDHQVKWIL ASPVGWKKGLAERVLTPVDKNGKPLKCEGSQCEGGFDWSWTQHTAWRIDSKSTKDVIYLS VFDNGDARGMEQPPLPTMKYSRAVVYKIDQKKMTVEQIWEVGKDLGYDYFSPVTGITKYM DDKDTMLVFWSTAGMGASPEKAGKLGRLHPRICEYRWGDKSLAVDLTLWDTCGYQAFPVS FEEAFSKN >gi|319806062|gb|ADMF01000001.1| GENE 21 29089 - 29259 224 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAPIMATKNGTAASGMNYDQVYRLTTHGSNRLGGNATADVLTFGRIAAKTALDLQ >gi|319806062|gb|ADMF01000001.1| GENE 22 29602 - 32178 2208 858 aa, chain + ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 588 858 362 638 638 90 25.0 1e-17 MRRTLLSLSIAAAISLPVLVQANPLTDQGGDQTVSGDQTYTQVQATNGNTLNFTNGSIKV DNSANTTVNAPAVLVSGGSTINFGSTESKLGTVSVLANPNKVEYTDKGETYQDYPYWTTY VREGVLNVYAQKYEQKNSGYGVYVIGQDSNKKDVSSTLNLFIDEFESTSAYEALHVRQGE GAVINVGAKDQWLTSFKATKTVEESGVSLLQANEGGTINIFSKYVELNAFDTHVGGGAIG TGAWGTVNITADELKIKGSINGDYGGYSASNADSEYKVNINVGKLTMDGGIYAGVTGKAA SGDVGVSTGTARKEIINITATDAASSITGDLEATNRSETNITFVNGGTFTGDIVAKNITN EDGKIPEDSKDITTVSKISLNGQMTYKGDATLVGASELKLSGDIDGSESTVNSSEDSAVS VEGAISLGTVTSTSSKGVTITDGSLLTLSNGESSISELNSDGDLYLSETATAKLNTVTGK ATITVDSAANTAAITKVASGSAVTARATAHFNDASASASDALTSLLETVTVGDGSSLSEA VVEEGDVNNKVTATIEDGKVVSQTETKNSKLDAFNSIATLSAFQWRHEMNDLTKRMGELR DSEGTIGAWARVYGSELQYGDQNVKQKSNSIQVGSDIEVAPGFKVGAAFNYTNGSAEYNN GDADNNAYGLGIYGTWMAENGMFLDVIAKYVRLDTDFSLNGFDGSFDNNAYSLSAEFGWR FDLNDLAFVEPQVELSYGRVAGDTFTAANGVTVKQDDFDTLIGRAGVRAGFKFPENKGNI YAKFSVAHDFQGEMDAVATNGTALNTMHSDIGGTWVEYGVGGNFRLCKNAYGYVDLERTS GAEVNANYRWNIGLRTFF >gi|319806062|gb|ADMF01000001.1| GENE 23 32204 - 32404 111 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGNLKPMAFTPGSEWFLIRRNVIKHIRQNLANCNGRTSDSNIPEKHLSAFWMLSAQRKTH LAFLGN >gi|319806062|gb|ADMF01000001.1| GENE 24 32385 - 33374 403 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] # 14 324 19 339 346 159 31 4e-38 MGFKFPILIAGFCLVTGAVNAEELNAYSIMPEKYASKIFAEFTKDTGIKVNFLRFSSGEA LARLTAEKKNPQVDVMLGGPADTYAAGIKEGIFEAYRPKDSDAIPANLRDPGNHWTGIGI IPLCFLTNTKFLEKNGMQAPTKWADLLDPRYKNGLQMADARTSGTATERIYSLVKVMGED EAFAFQKKLNANIQMYTKSGAGGAMPIATGQCASGIFYIVDALDIAQQGYPVKITYPEDG VSFGIEATGVIAGGKNNEQAKKFVDWATSKRFAEFIVANKINYVPARTDVETQNPILDLS KINVITTDVTWKGDNRKRFTQRWINEVIR >gi|319806062|gb|ADMF01000001.1| GENE 25 33458 - 35131 1926 557 aa, chain + ## HITS:1 COG:VCA0686 KEGG:ns NR:ns ## COG: VCA0686 COG1178 # Protein_GI_number: 15601443 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Vibrio cholerae # 32 543 165 684 700 287 37.0 4e-77 MAHTQSLPQRGDAASRFTVLMLWVLLAVFVVYPLVRLLAMAFTVDGSFTLENLRPFVESW YDRQAAVNSILLGCSVGVAGTVLGFIFAFAVTRLSLPKWLCTAVSAVTLLPLISPPFTSS IALTLSLGPNGILLDFFGLGNFNFYGFWGTFISETLTFFPVAFMTLSTILARIDPNLEDA AYSLGASSFKVFRTVTLPLAAPGIANAFLLVFSCSLADFATPQVLGGHSFPVLPTQAYLV ITGMYDFKGGAALSFMLLIPAIIVYSLQRWWVGKKSYVTVSGKAGGRSSVKGPGPLLSSV IVATVAVVIAFILYLYAIILTGSLVKVWGVNNEITLENYSYVFTHGSKAIKDTLLIACIG TPLGGLLAVLVGYATARLKVRGSRILETVSLLNYTLPGTVVGIAYIIAFNDKPIMLTGTI YILVAAYLFRYSSAGIRNVIAALSQIDPSIEEASRSLGASSVKTFTSITIPLVLPAILAG MRYLFIHSMTAISATIFLVSVHWTLITTRILECMTELQFAQACAFSIVLIVLVFIASGVI NLLARALCRSGDAIGVH >gi|319806062|gb|ADMF01000001.1| GENE 26 35134 - 36222 1313 362 aa, chain + ## HITS:1 COG:SMa2207 KEGG:ns NR:ns ## COG: SMa2207 COG3842 # Protein_GI_number: 16263644 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Sinorhizobium meliloti # 4 291 5 287 361 304 52.0 2e-82 MSISLELRGICRTYVKDNESFLAVDNVNLTVSPGEFLTFLGPSGCGKTTTLRMIAGFEIP SSGQIIVDGSDITQVPANKRDMGFVFQNYALFPHMTIFENVAYGLRIRGLSGDALASKVR EGLAMVGLGNAEQRYPNQLSGGEQQRVALARVLVLRPKILLMDEPLSNLDAKLRLHMRTE IRRIQQDLRITCLYVTHDQKEALTMSDRIMVMNRGRIEQVGTPMELYEDPATPFVADFIG QANLIPGTLLNAEDGYARFQIGEAVLKARMGRQNPPAKGEKALLVVRPENLGFSQDGGGI AMRIVNRLFEGDRINYEVVIPGLEQMKPFAMSVPFLPGTKLADADAAIYASFMPDAGVVI RG >gi|319806062|gb|ADMF01000001.1| GENE 27 36311 - 37372 1273 353 aa, chain - ## HITS:1 COG:CAC0809 KEGG:ns NR:ns ## COG: CAC0809 COG0309 # Protein_GI_number: 15894096 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Clostridium acetobutylicum # 25 353 7 335 335 316 48.0 4e-86 MTHDLKAERAGLGRRLDVRRGTVDMTHGSGGRASAQLIGELFAKHLTNEWLSQGHDGAVM PPIVKPVAVSCDAHVVKPLFFPGGDIGRLAVTGTVNDVAMCGAKPLWLSAAFILEDGFPL ADLEKIVISMAETAKEAGVAIVTGDTKVVEKGHGDGVYIATTGIGERLTDHLVSGKAARP GDVVLVSGSIGDHGMTVMSLREGMTFGTTLVSDCAPLGRMVEAIVAAAPNVHVLRDPTRG GLGTTLNEIAAESEVGILLHEAAIPVKDEVRAACEFLGLDPLFSACEGRLICIVPADEAD AALAAMKADPHGAGAAKVGEVRSEGPGFVEMETLMGGRRMVDWLTGEQLPRIC >gi|319806062|gb|ADMF01000001.1| GENE 28 37420 - 38559 1083 379 aa, chain - ## HITS:1 COG:alr0696 KEGG:ns NR:ns ## COG: alr0696 COG0409 # Protein_GI_number: 17228191 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Nostoc sp. PCC 7120 # 1 379 1 373 383 415 51.0 1e-116 MKYVDEYRSGETAKGIAARIREEADPKREYRFMEFCGGHTHVLSRWGLGDILPESIRMIH GPGCPVCVMPIGRIDMAMNLALNEHVILCTYADAMRVPASKGRSLFKCRAEGGDVRMIYS PMDAVKIARENPDRQVVFFAIGFETTTPPTAAAILAAKRLGLKNFSVFCCHVLTPAAMEH ILLTAPDRPDAPKLNGLVGPAHVSTVIGWKPYEHFARDWKIPVVVCGFEPLDMLYSILML VRQVNDGRSEVENEFIRAVTENGSRKAVELMAQVFEPRESFEWRGLGTVPKSALRIRPEY AEFDAEKRFSMPEIRVADNKACECGAILRGEKEPKDCRLFGTVCTPAHPIGACMVSSEGA CAAYYSYGRHSTIEIQKNA >gi|319806062|gb|ADMF01000001.1| GENE 29 38556 - 38840 407 94 aa, chain - ## HITS:1 COG:MK0227 KEGG:ns NR:ns ## COG: MK0227 COG0298 # Protein_GI_number: 20093667 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Methanopyrus kandleri AV19 # 1 65 1 63 92 67 49.0 8e-12 MCLAVPAQLTTVSPDGMTAAAMIGGIEKDVDVSLIDDPKSGDWVIVHVGFALNRIDEAEA QETLKALAALAAPSAAAASNDPAAPSADSEEITA >gi|319806062|gb|ADMF01000001.1| GENE 30 38883 - 41420 2302 845 aa, chain - ## HITS:1 COG:aq_672 KEGG:ns NR:ns ## COG: aq_672 COG0068 # Protein_GI_number: 15606085 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Aquifex aeolicus # 16 801 8 739 746 528 39.0 1e-149 MTPTNVNAKDIEARLVRVNGLVQGVGFRPTVWRIAAALNLRGEVFNDPQGVGVRLEGDPQ ALDAFPAALRRECPPLARIDTLEIFPAETVGFTDFRIVKSETAGEVSTMITPDASVCRAC LTEVFTPANRRSRYAFTNCTHCGPRFTITRALPYDRPQTSMAVFPMCPACLKEYENPADR RFHAQPNACPVCGPELSWTDARGHLIPEAGDPVRAAAAAIARGEIVAVKGIGGFHLVCDA RNPLAVERLRARKGRGEKPLAVMAANTQSIREFVHVSAAEEKMLLSPAHPIVLLERIESD EDPTKPRLELPGIADGVSELGVMLPYTPLHALLFHALEGEPAEADWFEKRLCPSLLVMTS ANPGGEPLVIDNDEAVLRLGQIADKFLMHNREILIRCDDSVVRFVNDLPLWVRRGRGVTP EAVQIQAVPAAPGCRAPHAVLAAGSFLKNAAALTRGSELFLTQHIGDLENVASCQALELA AEHLEKILDEAPDAYACDLHPDFFSAQLAQKLAHEHQKPLVAIAHHAAHVGAVMAEAGRS TRTIGAALDGVGLGPDGSVWGGELLACSAEGFERLGTLEALPLPGGDRAARECWRMGAAL LLSIDREDLIEPLLSGPEVSPWMLAALPRLAASPNTPRTSALGRWFDAAAALLGLCRIQK DEATAAMRLESAAAPILRHVPETQILAGFDPTWTIEQGVLSLAPFWKSFAAFLAHPEGRT KRRQAQAAAAFELVLSRALVDWIDAATLHDPDRADVMLSGGCFLNRTLASAVPAGLQALG IAAHLPHVVPPGDGGLALGQAWLASLALAEGRAEYPFIQDKTLFNHSRDPGCSESATSAA APTRV >gi|319806062|gb|ADMF01000001.1| GENE 31 41511 - 42383 905 290 aa, chain - ## HITS:1 COG:STM2855 KEGG:ns NR:ns ## COG: STM2855 COG0378 # Protein_GI_number: 16766161 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Salmonella typhimurium LT2 # 1 284 1 287 290 274 50.0 1e-73 MCTTCGCGHSGPHMHEHVDADGNVTLTVHDHDHDHEHDHGHTHDHEHAHAHPHDHSHGHD HPAHSHDADMSAGRAISIEEDILARNDAVAAKNRALFAKLGALALNLVSSPGSGKTELLC ATLKALSDVPTMVIEGDQETDNDADRIRATGTRALQINTGKGCHLDAAMIERALDALPPA EHSVVFIENVGNLVCPAEFDLGEAHKVAVLSVTEGDDKPLKYPDMFRASDLVIINKIDLL PYVRFDAERAAANVLRVNPRAKVLQLSATTGEGLEKWLAWVKAQLVLASL >gi|319806062|gb|ADMF01000001.1| GENE 32 42523 - 42891 448 122 aa, chain - ## HITS:1 COG:hybF KEGG:ns NR:ns ## COG: hybF COG0375 # Protein_GI_number: 16130891 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Escherichia coli K12 # 1 110 1 110 113 71 33.0 4e-13 MHELSIAEGIIEIVERTANANQVQHVKTVRVSIGELAGVDIPSLEFAWQSVRKGGVAQNA ELEIERPNGEAWCLQCQKTIPLHRYGDPCPDCGGYQLAATGGTEMRVIDILEAPDDPADS HG >gi|319806062|gb|ADMF01000001.1| GENE 33 42884 - 44413 1199 509 aa, chain - ## HITS:1 COG:no KEGG:Slit_2426 NR:ns ## KEGG: Slit_2426 # Name: not_defined # Def: putative hydrogenase expression/formation protein HupK # Organism: S.lithotrophicus # Pathway: not_defined # 278 449 208 351 360 65 30.0 4e-09 MIIDDASIRVHIKSKPCSRATAVVSSTRTNAVARSASLPENRGKVRRMLTLLYGLCPLAH LAAFEGALSAARGEDEKLAGPRLERHRLLTDAVRLEGLTENLRVLLLEASRLELESEALN VMPGDMPPAPALEPVDARAVGRLRAVLSQAASALLKLPMSSSWSETEHNLAQRTRAELSA SMNAAAAIAQTSLWGMPPEDFCGLVEKPDEEAAAAIMQWAKTYAAKLPAAHLLASMLACA ETLDPRAFPESEIPPLPHHAALERQAFSEELCYRMLHDPGFDLAPFWQGTPRLTGSAARL RNHPVVEGLLSRFGCKPAVLMAARIVETAEVLRAYRACTMCREARDEALEVGDAFTHILS ASSPADGTGICLVETARGLLAHAAAVSAQGELTALRITSPTEWQFSPNGPGQRIARPVVK ELRFPQDDLERRKLEVRVRRALFALDACVPITFAYTPAVGTQAQDAALEAMRRPAAPRTE RTDNGVRAPQTAAAYSDAAYELIGVPSNA >gi|319806062|gb|ADMF01000001.1| GENE 34 44410 - 45183 653 257 aa, chain - ## HITS:1 COG:no KEGG:Rfer_4094 NR:ns ## KEGG: Rfer_4094 # Name: not_defined # Def: hypothetical protein # Organism: R.ferrireducens # Pathway: not_defined # 19 163 9 155 165 79 31.0 1e-13 MTEAQRENPSRRLRVFTQSPAEFFDEGLRQIEKTRMAGLPILNPKLVVRSAGWRRWGNDW IGVVTTPWAVLGIYACGSREGWVDVPADRTRIIELPAGDFPFRAVEDPILGRCLFLSLKS PLLDVGDQETADLIGKITLDTLFKAQSIPEDDEDAAAWVPPTADGQLRRVIPIRMTPPKN IEATPPLTPPKPEPQPAERESFFDKLEEPVSRRELFGRRKKAEPSDAAPLINADTTHAEN GANYPLRPTSHSEGIKP >gi|319806062|gb|ADMF01000001.1| GENE 35 45077 - 45358 104 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRVFSICRRPSSKNSAGDCVKTRRRLLGFSRCASVMDLSPHFSILPEGHQNSIGSGMEDV LRLLTACDASMVPKRRDDRPAAAASFAVLNGRS >gi|319806062|gb|ADMF01000001.1| GENE 36 45545 - 45784 123 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSYLEELIVFSNDIDYSENAWLYTLLVLLAYAKRALGGMRRTILGFNLLTSCSDKCFQNL FAISRYRGKKILAKAVLNP >gi|319806062|gb|ADMF01000001.1| GENE 37 45729 - 46001 130 90 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGDFLRTGAPESEARRSERAELQEAAAADAAAAQRLVLRFKHVGLPSLEKSGSSLETGWR VRRRQASFHSAAIKDLRLLLPKSFSRDIEK >gi|319806062|gb|ADMF01000001.1| GENE 38 45876 - 46970 1525 364 aa, chain + ## HITS:1 COG:STM1539 KEGG:ns NR:ns ## COG: STM1539 COG1740 # Protein_GI_number: 16764884 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Salmonella typhimurium LT2 # 3 357 5 356 367 473 63.0 1e-133 MFETQYEALRRRGISRRSFLQFCSLTAASLGLGSAGAQEIAHAMETKPRTPVIWLHGLEC TCCSEAFIRSYTPIVADVVTNMVSLDYDDTIMAAAGEQAEESLHETIEKYKGNYILAVEG NIPLHQGGINCVPNGEIFLNKIKHVAEGAKAVIGWGSCAAWGCVQAAKPNPTECVPITEV ITDKPIVLVPGCPPIPEVMTSVITYILTYDRLPPLDRLGRPKMFYGQRIHDKCYRRGHFD AGQFAEKFDDQGAKLGYCLYKVGCKGPTTYAPCSTIQWNEGLSWPVKSGHGCIGCAEPNF FDKGSFYEHETTVLPPIFAGVEGTVDKVGLATVAVVGAAAAAHAALSAVAQARAKTNKEI GGKE >gi|319806062|gb|ADMF01000001.1| GENE 39 46970 - 48733 2215 587 aa, chain + ## HITS:1 COG:STM1538 KEGG:ns NR:ns ## COG: STM1538 COG0374 # Protein_GI_number: 16764883 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Salmonella typhimurium LT2 # 2 586 15 599 600 740 59.0 0 MSERRIVVDPVTRIEGHLRVQAVLGDDGKIVDSMSTGTMWRGLEVILKGRDPRDAWAFVE RICGVCTGIHALSAVRAVEDAIGIKIPKNANLIRNILNATLYIHDHIVHFYQLSALDWVD VVSALDADPRETAAIQQKISPRHPLAAVGYFRDVQNRVKKLVESGQLSIFNKGYWGHPAM KLPPAVNLLAVAHYLEVLDFQREVVRIHTILGGKNPHPNYLVGGVACPINVHDTGAQGTM VNEVTLNYMRQVAQHAIDVVANVYIPDIKAIASFYPDWFKYGKGLAGINMMSYGDFPEIA NDYSDKSIQIPRGAILNGNLNEVFDVDTRDPEQVQEFVDHSWYKYPEADKGLHPWDGITD QHYELPPGSDGTETKFNWLAPDGKYSWIKSPRWRGHMMEVGPLARMVIGIAKNVPHYKEP ALELLKELNLPLEAAFSTLGRHAARALECEWMTHKLAQYIDDLTANIKAGDETAANMEFW EPKTWPKECRGVGPCEAPRGALAHYCVIKNGRLENWQAVVPTTWNASPRSSEGQKGTYEL SLIGTPLADPKRPLEIIRTIHSFDPCLACATHLYSLEGEELTSVQVC >gi|319806062|gb|ADMF01000001.1| GENE 40 48749 - 49468 876 239 aa, chain + ## HITS:1 COG:STM1788 KEGG:ns NR:ns ## COG: STM1788 COG1969 # Protein_GI_number: 16765129 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Salmonella typhimurium LT2 # 2 232 4 233 243 174 42.0 2e-43 MKIDPVTYEVDMSAGTHPLYVWEAPVRVWHWAMMVCMFVMIVTGFLIGAPLVSNLGDTWA TYDFAYIRFAHFAAGIIYTVLFIYRLYWAVVGNKYSRQIFIPPLWSWKWWKGVFGQVAYY LFMKKTSAEYAGHNPLAQLAMFGFFVLGSILLIITGLALYAQAWGADTSWMAWFGWVFTL FGDAQAVRTVHHALMYVLIIFTIAHMYMSFREDIMGGCTTLSSMTTGLRMFKHAGGDEH >gi|319806062|gb|ADMF01000001.1| GENE 41 49465 - 49665 190 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISAASDDEATTLMVLHVGDYIPSARKLAPGGPDTITRTLPGALKKNSPKALALGEFFNG LTFIWN >gi|319806062|gb|ADMF01000001.1| GENE 42 49749 - 51287 1103 512 aa, chain + ## HITS:1 COG:ECs2525_1 KEGG:ns NR:ns ## COG: ECs2525_1 COG0861 # Protein_GI_number: 15831779 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 238 1 238 240 330 71.0 4e-90 MEFLFDPTLWVGLLTLVVLELVLGIDNLVFIAILAKKLPAKQQDRALYTGLGMAIFLRLA LLSVMSWLVGLTAPLFTLWGHSFSLRDLILCAGGLFLLFKATSELHERLEARPHEESAAG SATSFWLVIVQILILDAVFSLDSIITAVGMVDNLGVMMAAVVIAIGVMMLASRPLTAFVN AHPTVVVLCLSFLLMIGLSLVADGFGFHIPKGYLYAAIGFSVMIEFFNQLAARNLRKHTE KLPFRARTLSAIVNLMGRPGEKVDTAAKGTAADGKPDMFAEEERHMVEGVLSLAERTVKT IMTPRCDVVWIDLEHPASEIAALIKREPHSCYPVCEGSLDNVIGILKAKDLAGDTLNPAA IADIARRRRALVVPETVSVIGLMRNFQEGNHHIILVADEFGIIQGLVTTHDLLEAIAGDF PDENEGRFIEPIAGGWSAEGAADLFLVEQTTQVSGLRPENDSCATLAGLLLEKFGRIPTA GESITFSGLRFDVVKATRSRIERVRISRADAH >gi|319806062|gb|ADMF01000001.1| GENE 43 51643 - 52134 570 163 aa, chain + ## HITS:1 COG:FN2010 KEGG:ns NR:ns ## COG: FN2010 COG1846 # Protein_GI_number: 19705306 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Fusobacterium nucleatum # 20 141 18 139 160 61 27.0 6e-10 MKEDRPILAYAARMHEEGRRFLLTEMKKAGLDELTTSCGDIFQVLFQQEGLSLTAVAQKI RRTKSTTCVMLDRLAKQGYVDRLPSESDGRASIIMLTEKGRALKPIMADISTRMNERILG SLTEDEADQLEVLLAKAVRTYGPAADETGKEGGGCTCSRVLKG >gi|319806062|gb|ADMF01000001.1| GENE 44 52271 - 53455 1295 394 aa, chain - ## HITS:1 COG:MA2153 KEGG:ns NR:ns ## COG: MA2153 COG0614 # Protein_GI_number: 20090996 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 48 392 37 377 378 179 32.0 9e-45 MLTRRTLLLSAAAASLAMLPFASFAAEAAAGEAALGNAALPPAGSWPVTFKDLAGRTVTL TQEPQRIIVANYIQNFMLVGGRDALKRVVGMTQDHWESTRMGEYQVFTTAYPELKSIPSI GGFHDDILNSEKIIALKPDAMIINRTQFAANTQRIEVFERAGIRVIVTDYHAMKLENHVL STRIIGRMLGRDTVAEELCRKAIDGLKDVDARVARASAGKKPPKVYMELGSKGVGNYGNT YNSTILWGAMLARVGADSISANNREPYSAATREYVISQNPEIIIIGGSRWSGGASDQMQM GFTVDRKTAEKCLEAFMHRSLWQNLPAVKNRRFYAVDHGSLRSIIDWHMSAFIAKVCWPE GFADMDPEAGIVADYKHYLPDLDPAGTFTLALGN >gi|319806062|gb|ADMF01000001.1| GENE 45 53517 - 54350 682 277 aa, chain - ## HITS:1 COG:MA3459 KEGG:ns NR:ns ## COG: MA3459 COG0500 # Protein_GI_number: 20092272 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 19 232 3 217 249 129 32.0 9e-30 MTTTTPICETASVKSSAALGDKVSSYWNTRAEGYSLRTADELNGPRGAHWQERLLSNLRG VPSGGSVLDVGCGPALLAITAARCGWKAYGCDSSPEMLRRALENAKTAGADVTFCQCDAA ALPFADETFDAVISRNVLWNLPHPERALKEWMRVLKPGGRLLYEDGNHYRHLVDPLFKRH HDNMPAPFGHQPQYMLNVDTSAIDAIAQTLPLTQELRPQWDLHALIDLGFTETQVIEPSL AEVSDPLSGKSIRIVTDFVAAATKPAAAAFSNVTAAT >gi|319806062|gb|ADMF01000001.1| GENE 46 54370 - 55212 721 280 aa, chain - ## HITS:1 COG:YPO1345 KEGG:ns NR:ns ## COG: YPO1345 COG1120 # Protein_GI_number: 16121625 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Yersinia pestis # 5 261 3 255 261 169 38.0 8e-42 MTGLELRVENLNVGFGRRTVLRDISFTVHAGEFICLLGQNAAGKTTLFKAVSNLIASSGR VTLCENGKALPRSAIAYLPQLTQVQSRLTVFEMVMLGLGRRLSWRVTPDIFERVDQTLHA MQISHLADRPVASLSGGQKQLVFMAQAFVSRPRVLLLDEPTSALDLRHQLIVMQAARSYA KTTGAAVLAIVHDLMLAARFSDKLLMLGDGTIRRFAAPAEVLTPEELAVVYRVEAAVERS QEGLLTVIPMTPLDVDDGTHGHGSHPHAHDPACTHSSSSD >gi|319806062|gb|ADMF01000001.1| GENE 47 55212 - 56213 1078 333 aa, chain - ## HITS:1 COG:SMb21430 KEGG:ns NR:ns ## COG: SMb21430 COG0609 # Protein_GI_number: 16265006 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Sinorhizobium meliloti # 4 331 25 353 356 197 43.0 2e-50 MKHRLALIFGLTALTALLFAADLTAGSSGMPLSAVLNALWAGPSGQSPEALILWSLRLPM TLTALFVGAALALAGLQIQTITANALASPSTLGITSGASFGAALAITAGFTVGGELWLGT MTASFLASLLICALILALGRLRGMTPTTLILAGIVMNFFFMALHQFLVYVASPEVAQLIS GWTFGNLERAGWLSAACALGAVLFGTLLLAPKVWALTTLSIGEERAKSLGIQVSRLRLLV FSTASVLIAASVSFIGTIAFVGLVAPHCAKLLLGDDQRFLMPASMLFGGAILLLSSLLSK FISTGAMLPVGIITSIVGVPFLFVLLLKNRRDY >gi|319806062|gb|ADMF01000001.1| GENE 48 56551 - 56937 309 128 aa, chain + ## HITS:1 COG:AGc2712 KEGG:ns NR:ns ## COG: AGc2712 COG0239 # Protein_GI_number: 15888794 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 124 4 122 125 92 56.0 1e-19 MNFTQLALVFLGGGIGASMRWLLSASAVRFLGTAFPAGTFAVNLIGCFLMGLVVEYWSCR LGLSANLRLFLTTGLLGGFTTFSSFALEAVLLGERGALALSVFYALGSLVLGLGAVVGGI ALARAIAG >gi|319806062|gb|ADMF01000001.1| GENE 49 57060 - 58598 2379 512 aa, chain - ## HITS:1 COG:STM0849 KEGG:ns NR:ns ## COG: STM0849 COG0747 # Protein_GI_number: 16764211 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 8 512 11 512 512 561 57.0 1e-159 MNLKHAAAALALTSLVAAGAAQAAPKEITVAIASTFTTLDPYDASDTLSQTASKSFYEGL FTFDKDMKVIDALATDYKVSDDGLVYTVTLRKGVKFHDGSEFKADAVKANFDRVTNKANG LKRYMLYQNIEKTEVVDPYTVRFTLKKPFSSFINQLAHPAGVMICPSTLANKTNKQIAFE PCGTGPYTLDKYNPSEGMRVVKNPNYWQAGFPKLDAINWKPVVENSTRVAMLLTGEAQFA FPLPAEQVKQVQGKDQVRLDITPSIILRYVEMNMSKKPFQDKRVREAFNYAINKEALCKV AFASYADPATGYAPAAIDFAEKLGPWPYDPKKARELLKEAGYGSGLTINLWSGYNHTTAQ KVIQFLQQQLAQVGVKSNIRALEAGQRTALVESVPTPDKSQHDLYYIGWSSSTGELDYAI RPLLASENMPPVGSNEAYYKSEKVDRLIQEGLATTDRTKKAAIYKEMQEQLWADMPWIPL VTEKNIAASAKNLTGFYIQPDGGYNFYQAELK >gi|319806062|gb|ADMF01000001.1| GENE 50 58924 - 60096 981 390 aa, chain - ## HITS:1 COG:RSc3091 KEGG:ns NR:ns ## COG: RSc3091 COG3203 # Protein_GI_number: 17547810 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 10 362 1 342 376 73 26.0 9e-13 MTFNPKLFPLSRCAACAALLAAAASSAVCAASVSIGGMYDTGLKYTFVNDGIHGTETALG MESSMLDSSRFAIRAHEDISDQLSVGFIAESGFRADSGQLQEQDIFFNLGSLFYLAHKQY GELWMGRLGTMRSGATPAGFQILGQRTSPFGSGWDGYGAGALYAMPFIGFSVDNALLYKS PVINGLQLDIETSFGGTDGGDENKANTDRYSAAALTYDRGPLRLVTVLEYMNENSSKGSR DDEIAVTVGGSYDFTAFQLFGWAQYFRGANHIMALSNIGDYPLFTGLDDMRGFAAAVSAK IPTGHGFTDLALSWLDAKVHDDVEAADEDNVGSSLKRFGATIAYEYPLSKSTTAYAAVGV YKDFIDARTSNAPVDDPLSGQAMAGIHINF >gi|319806062|gb|ADMF01000001.1| GENE 51 60394 - 62280 2673 628 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 93 628 1 484 484 117 27.0 1e-25 MITKSFRMTAVAALLCGVSAMAVAAVTAGTYEGAAQGKLSTVKAAVTLNQDGRITDVKLD VSGETPELGGAAAKKMAPAIVEHQSTAVDGMSGATVSSEAIRKAVAAAIEKAGADPKKYD VKVAKTVGADETLTADIVVVGAGASGTAAAVTAAEAGAKVIVLEKGPAVGGAGKLASGLF AVESSMQKAKYKNNPELLSQLTKDQLYKQLMDYNHYLSSASITRRVIDESSSTVDWMNKH GAKLELIDWNPQQGQNPYPIRWRIYHRYVDNAGAFKNMYDAFGKLGGKLLLQTRAYDLTQ DKDGNVTAVIAEKADGGKLTIKTSAVILASGGYGGDANRLAKEMESSQLTNRIAWSNNGE GLNMAWKAGTQKSGEHSALIHAAEFDGLSTSSAGSHGMVDSNLLVRVLKTPLLWVDPAGR RFANEELIYDTVYWANAGYSVGGKYFVVVDGKTLDSYTADKLPFEVSGAGPANPTGKGDF RALMEEAVRQGVAFKADTLEELAQKAGFETKGFLSDVKAYNQAVSSGKDPFGKPAEFLKF KVEKGPFYAARAKVVSLSTLGGVRVNDRFEALNSELKPIHGLYAVGNNANGFYSAPSYPP YQGLALGFAWNSGRIAGKEAAEYVKTAK >gi|319806062|gb|ADMF01000001.1| GENE 52 62530 - 63420 723 296 aa, chain + ## HITS:1 COG:STM1487 KEGG:ns NR:ns ## COG: STM1487 COG0583 # Protein_GI_number: 16764832 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 243 4 247 299 116 32.0 4e-26 MFEPRHLKAYLALVKCMHFGRAAEMLGISQPTLSQQIRMLEEAVGAPLINRSNRTMELTP VGRVFAEDAQQILTLMERAKRNAEDILSGEEAEVKLGVCPGTISSGFLINLLAESRRRWP RIKVLTEVSPPTNLAARLSKGQIDIYAGLTTGVDFPQTVTSQVIAEWDAVLAVPRSRLVL EETTSPEFLKDETFIYLEGGEAGYPHVVESILGFTPKSTLSTPSSRLMMAYVDAGYGVAL IPAPDATIRGTNTLIRAVAGGRGVMKARAARLAVNNAPAVRRVYDVILALSRNGSE >gi|319806062|gb|ADMF01000001.1| GENE 53 63659 - 63925 261 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEFQVTSREFNRNSAKIREESLHKPVIITVRGEPTNVLLSYKEYVRVFKSSDNRKTATEL FAHKKAAYCDLESELVRNKELVKAPEFD >gi|319806062|gb|ADMF01000001.1| GENE 54 63925 - 64350 414 141 aa, chain + ## HITS:1 COG:SMa0453 KEGG:ns NR:ns ## COG: SMa0453 COG1487 # Protein_GI_number: 16262691 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Sinorhizobium meliloti # 1 137 1 131 135 81 36.0 6e-16 MFLLDTNAVSESRKLATSNVDPVFKNWIDEIDPNLLYVSVISLMELEVGILRISRRDTRQ GIVLREWFDMEIKPNYEGRVLDITPDIAYTCARLNVPDPRPYQDAWIAATALVHGMTVVT RNVRDFVPMNVSLLCPFTQPH >gi|319806062|gb|ADMF01000001.1| GENE 55 64453 - 65040 645 195 aa, chain - ## HITS:1 COG:aq_549 KEGG:ns NR:ns ## COG: aq_549 COG0512 # Protein_GI_number: 15606008 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Aquifex aeolicus # 1 190 1 189 197 228 54.0 8e-60 MKIFMLDNYDSFTYNLVQYFQILGCDVTARRCDCTTVETVFALRPDAIVLSPGPGRPESA GILLELIREGLARQMPMLGVCLGHQAIGEALGGDVIHAQKVMHGKTSRIRHDGQGLFAGL PEDLSVVRYHSLAVDRTTLPADLMVTAETDDGEIMGLRHRTLPVEGIQYHPESMLTERGL DQLENFLKIAAATQK >gi|319806062|gb|ADMF01000001.1| GENE 56 65077 - 66597 1647 506 aa, chain - ## HITS:1 COG:all0328 KEGG:ns NR:ns ## COG: all0328 COG0147 # Protein_GI_number: 17227824 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Nostoc sp. PCC 7120 # 4 497 6 500 504 353 40.0 4e-97 MLAFSEFARLAQQGNYVPVTLTLTADLETPVSILSRLKDDENVFLLESVEAGERFGRNSF IGLNPRARFSVEDGRAFVEDADGRRELPEAATKEGAFMALRSLTEGLRPAAPTDLPAFTG GAVGALGWEMCGEFEPKTGYKPHGLTAAFMVAEDMIIFDNFRHTMTISAGVRIDEFPDLG SAFAAGAARVEAVRARIRRPLDLSKLPDQHPAAVPVLKANTTEHDFCAMVEKAKGLIRDG ELIQVVLSQKFSGETTIEPFTFYRALRRINPSPYTFFMKMGGLTFVSSSPETLCRTEADG SALLRPIAGTRKRGASADDDERLSEELLADPKERAEHLMLVDLARNDLGRVAAPGSVKTP SFMTVEYFSHVMHIVSTVTGQLAPGLDAYDLVRSAFPAGTLSGAPKVRAMQIIRELEPEP RGFYSGAAGYFGYDGAMDLAITIRTLIFEDLEEPEAPGGAKRRNFSIQAGAGIVYDSVPA LEYQETKNKAAAMMKAVELAARGLAD >gi|319806062|gb|ADMF01000001.1| GENE 57 67009 - 68943 1736 644 aa, chain - ## HITS:1 COG:CAC0897_2 KEGG:ns NR:ns ## COG: CAC0897_2 COG0169 # Protein_GI_number: 15894184 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Clostridium acetobutylicum # 231 452 8 246 273 134 37.0 8e-31 MKAYSAETSHTTLQKDTFEFIMTDQQTAEPHPHPAQLREAPSDLLADLRAKIDVIDAKLS ALIVERLAIADEIGERKRGRNLPIHAPKREEALLEKLVERVPPNERPIVAAVYELLIAGS RQRQLAAQLCDEGALGTEGHQPGRLSVFKTLGEGETPQYAAKRLICACTAAGAAPALLEA TREGVGLTLEGAGMNRVLAADLKGLGAKVEITIDRNAEPIPPKAGAGLLCGLLGRRLGHT LSPEIHARLGAYAYKRFECEPERLDEFLRTTPFDGLNVTIPYKEAVLPYCDELTPAAQHV GAVNTLVHRPDGKLVGDNTDYAGFLDTVRASGIKVKGRKALILGTGGAAKCVQAVLKDLG AFAVMVNIRGAEGREALNRHADAEILVNATPVGMFPVCGVSPIGDLGLLPKLSFVFDLIY NPAVTELMLRARARGIPAVNGLRMLVVQAEAAARDFLSIASPVDGAPAQPAASAEEIHAD LKRQFENIVLSGMPGSGKSTVGRILAARLGRPFIDLDEEIEAAAELPIPEIFRRHGEPAF RDLESRIAAIAGARRGVVIATGGGTMMRVKNVSALKQNGRVALLKRPIEELPTMGRPVSQ SRPLSVIWAERRATYEGTADCSVDNVEPEAAARNVLEALGWPIG >gi|319806062|gb|ADMF01000001.1| GENE 58 68940 - 70106 964 388 aa, chain - ## HITS:1 COG:CAC0896 KEGG:ns NR:ns ## COG: CAC0896 COG0082 # Protein_GI_number: 15894183 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Clostridium acetobutylicum # 1 357 1 356 356 290 41.0 2e-78 MNTTFGTYLRTTVWGQSHAAAIGCTVEGLPAGEAVDEEALCAFMGRRAPGGRLSTQRRET DQPEILCGLMNGITCGAPLTALIRNTDQRSKDYKAIADRPRPSHADLPAQVRYQGFQDVR GGGAFSGRLTAPICCAGGIALQILARRGIRVAAHLAAVGTVEDRPFSPMGETDAVLQARL KRELPVLSDEADKAMAAAVAAARKSGDSIGAVIEGMITGLPMGLGGPLFEGFDGALAFGL FGIPGVKGVEFGDGFAAARRSGSAENDPWEPLLSAPGAAPAANHAGGIAGGMTTSAPILF RAAMKPTPSIALRQQTVSLEAGTAAELIVTGRHDPCIGIRAVPVVEAVAALAALDLLLAP PAVLSKDLPNAECWASEALKARAENAAQ >gi|319806062|gb|ADMF01000001.1| GENE 59 70114 - 71508 1154 464 aa, chain - ## HITS:1 COG:CAC0895 KEGG:ns NR:ns ## COG: CAC0895 COG0128 # Protein_GI_number: 15894182 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Clostridium acetobutylicum # 5 448 6 419 428 263 36.0 5e-70 MQQTVSPQQLSGTIAAIPSKSWAHRELIAAALGAPDHAVLVRFRGGSNDIEATCRALRGL GAKIERLPGTGARVEGISRAERNTRTETPVLDCGESGTTLRYLLPVAAALNGPAGVIFTG SGRLPARPQEPLAGELERHGITLDYAEASPGALLPVRLTGRLLPGAYALSGAVSSQFLGG LLYALSVLDGPSTLAVKDRLESEPYVRMTLSALQQSGVEIAESRTDQGLPLWTIAGRGVL TPPEDVQVEGDWSNAAFWLCAGALTQNPEGIAVEGLSLTSLQGDRAVVDILSRLGAQVES SSEGRIGTVRVKPPKNGAALRGQTIDARQIPDLVPILAVAAGAAEGETRFTHAERLRIKE SDRLQSTAQLLHLLGVPHEELPDGLVVHGIGSARKFSGGRISSFKDHRIVMAAAVAGASG GAPIVIDGAEDAAKSYPHFFEDLERLKGSAAPADLKTRNCIQND >gi|319806062|gb|ADMF01000001.1| GENE 60 71558 - 72685 1016 375 aa, chain - ## HITS:1 COG:XF1334 KEGG:ns NR:ns ## COG: XF1334 COG0337 # Protein_GI_number: 15837935 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Xylella fastidiosa 9a5c # 8 350 8 346 394 211 42.0 2e-54 MSCCERSRILHVSTGRTYDVEALPGLLHACGHEALKARLQALVPERAVIVSDTNVAPLYA RAAADALGTKCAGIHVIPAGEASKTPAELVRALEAFAAIGLTRSSAVIALGGGVIGDLAG LAAALWMRGIDCVQIPTSLLAMVDSSVGGKTAVDLPAGKNLMGVFSQPKAVLIDPQALDT LPERERACGWGEMIKYAGIDGRMNQLVHEALAGIEPGSPAPLPTVDLILAAIDVKRRIVE ADEREAGERRLLNLGHTVGHAVEAAAHWELSHGASVAVGMAILTRALVREGRLPDEMRAD LETLLAKTGLPSAVPAALRARSDLDFSPESLLKLCQHDKKAGAADVALVLPVSPGCARIE RTSWAKLLERIRAGL >gi|319806062|gb|ADMF01000001.1| GENE 61 72682 - 73752 1277 356 aa, chain - ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 329 1 329 337 355 59.0 7e-98 MIIIMKATATTTDITDLKDRLESRGLRAVVMQGQEKTAVGVIGETRLHLPADQILALPSV ESIRRVSDPCKLANRLFHPEDTIVKAGSAKVGGGHFAMIAGPCSIESEEQIVGIAKAVKV AGATMLRGGAFKPRTSPYDFQGLRSEGLDLLLKARKATGLPIVTEIMSITHLPLFEDVDV IQVGARSMQNFEMLKELGRTNKPILLKRGLANTIKELLMAAEYIMASGNDQIILCERGIR TYETATRNTLDLSAVPVLHEKTHLPVVIDPSHATGVARYVPSMAAAAAACGADGLMIEVH NNPAAALCDGPQSITPEEFERVVKTVNAVRAAVNLHNMAAPSAVRTAEDVIRVCAS >gi|319806062|gb|ADMF01000001.1| GENE 62 74229 - 75167 999 312 aa, chain - ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 301 1 301 303 372 55.0 1e-103 MPVILPNGLPANERLLDENIFVMSPDRARTQDIRPLRILALNLMPTKITTETQIARLLAN SPLQVELTLLQTASHRGRHVSGDHLDAFYKTFDDIEDERFDGMIITGAPVEQLDFHEVNY WEELKGIFDWSLTHVYSTLHVCWGAFAALWHHYGIRKHPLAEKLFGIFEHEVLRPSNPLV RGFDDRFFVPHSRHTGLNLKDLAAVPALRVLASGRRTGPFLLSTENGRQIFVTGHPEYDL FTLDAEYRRDLEKGLEISVPENYYPSDDPAQRPINRWRSHAHLLYHNWLNYYVYQTTPYD LEELSPLAGEPR >gi|319806062|gb|ADMF01000001.1| GENE 63 75551 - 76822 1315 423 aa, chain + ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 8 419 9 427 432 278 42.0 1e-74 MTFEIWAALAVVCITVYGLLKRWETRLVLLTSGFAMCLLALDPIAAFKQFDKSMTNASLI VVVCSAMGFARVMNITGCDLHLVRLLTKPLNRLGIALLPCCMIVTGVVSIAISSLAGMCA AIGPTICALMIRAGFRPAMAACTVIASTLPSFWSPGSSHNGFVAKIADWPIMDYLTYTGT RTLLISIVCIIVMVAACLLFGDYKKGGFENDGVHDSENKVELPEKANLLWAFAPLLPVIL LFVVAIGFPQVKVSVATAMLIGVIYTMIVTRVSPADLTKRFFDGMGQGYGSILGLIIAAG VFAAGLRSCGVIDVFVEALKGSSDLAKLGAAVGPYVLGVMTGSGDAAAFAFNEAVTPHAA SFGMTIPDLGYLASVAATFGRVSSPLAAGVIVISGIAGVSPIEVIKRSAPVQICTLAFLF FIS >gi|319806062|gb|ADMF01000001.1| GENE 64 76905 - 77816 707 303 aa, chain - ## HITS:1 COG:no KEGG:CV_2077 NR:ns ## KEGG: CV_2077 # Name: not_defined # Def: hypothetical protein # Organism: C.violaceum # Pathway: not_defined # 12 275 12 274 286 117 36.0 6e-25 MFTPAFRRFVWAGCALFAAAGTPACTLFGAVGEGMVEGGGTLAAKTRDEHPGPQRFDIAV PSKGYAYLGLFTGDKHRFNMGFNEKGLFLARSTSGSLLRKERLALPRFFKHRLSATDWIM QHYASVDEVLAHKEVFVEPVNYLLADRTKIAVVEVMPGGQTTVRITEHGTAAHTNHFIEP ESEALNQKIGSSSARRLERIRELLAAADKPLKIADMAAMTRDRHDGPVRSIWRTGTKPDG VQTLAAIAVSLPSIGNPSLNLTWRTDPNNPRAMDSLVCSVAPEDFKMGTAAFRKKCSAVE NHP >gi|319806062|gb|ADMF01000001.1| GENE 65 77908 - 79440 1562 510 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 41 504 59 495 502 177 30.0 5e-44 MNNLSRRSLIRGAAVLPAAGLGLVSTADASSSPKPKFDEIYDVVIIGSGFSGLAAALAAR EAGASAAVFEKMAFVGGNSSLSGGMFAVPGSSVQKEQGIKDSPEALMADMERIGLGLGDP QHIRFVCEHAAETFEWTRSYIGVDWNPTLTGKGGHSAERCLITRQGTGQGIIVPAVKKLA SLGVKPRTGCFMEKILRSPEGRVQGVEIREGYVFGKPAAGTVKRIGARRAVVLACGGFGA DVKYRQKLDPKLGAQFLTTNQPGATSESWREVSRIGARVIQADWIQCLPSCSPLEKGMGK ATHFASISGSLFGFWLSSLTGERFVNEFGDRKVCTDAILTVINKGGHALALSDSDGVAHL EKLRPGLFDQMIAEKTVVKYEDAEALAKAYKMVPEVLKKTIAQYNDDLAKQSDPKFGRRF DRSAKPIGSGPYYVSEMSPKVHHCMGGVATAVDTAVLDVMTDKPIPGLFAAGEFVGGIHG AVRIGACAVMDCLVNGREAGRMAAQSKAWF >gi|319806062|gb|ADMF01000001.1| GENE 66 79773 - 81461 1623 562 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 89 556 1 477 484 225 36.0 2e-58 MRKLFTIGFLAALGLAGSVQAALQDGTYEVSAKGNNGPVVFSVEIQGQAIKSIKVVRGEE TPGLGVEAIAMISREIISRQTTAVDAVSGATNSSRAVTAAVEAALQKAGGTAADLKKTHQ TDAALPTNNSTDVLVVGAGGAGMGAAIAAKEAGAKVLLIEKLPLVGGTTLLASTAFNAGG SKVQMSSAKPYTAADYYAKLEKGARGQELANVKQLADLSGPTADWLIGMGADLSRVINGS QHTPKDGGALGTSLVPVMKARVDALGIETRTDTKATDLIVGTDGRVSGVRVTTPKGSYEI HAKAVILATGGFASNPDLVKRFSPQWAGYPSTASVGATGDGIIMAEKAGAALSQMDLTGP QTVAYDTGHGAVSLTNVRYNGAILVNQEGKRFANELGQTAALASAITKQTGGVAYLIFDQ KAVDHASLMQAYKARGYFVEAPNLTDLAAKLGINPQALGATVTQWHTVYDTKQDPVFGRK DSIFTRIDTAPYYGQKISPASQTTYGGVMRDAKSRALRADGSVIPGLYVAGETASQFGAG VTIAVVLGRLAGTEAAKEVEAK >gi|319806062|gb|ADMF01000001.1| GENE 67 81703 - 83529 2411 608 aa, chain + ## HITS:1 COG:no KEGG:Gmet_1382 NR:ns ## KEGG: Gmet_1382 # Name: not_defined # Def: arylsulfotransferase # Organism: G.metallireducens # Pathway: not_defined # 1 606 9 624 625 714 57.0 0 MKSMKLSKIAAFAAFLGFSAAVAASGGPSGPAVTYPVQGHIGEVIVNPYNVAPLTAVIRD GGYKLDDVTVKILPKPNGRTIEYKVSKRQLKTHAGVPVFGLYQDYLNTVEVSYTRTFQGK AEKFTDRYQFYAPSIYTRSNGMPNQRRPFTVEVQKVDPEFADRLYLVDAQLNSVAPQGAR FTWNNPSGGALEWAYNTNVGIIDTAGEVRWWLFDTLIGDPENPWYSGYFMGFQQTKDGAL TWGFGQRYVKYDLMGREIFNRRLPSGYSDFSHSFDNAQNGNSLLRVAAFDYRRADNKRVH TVRDVIVEIDPNGGVVDDWRLAEILDPYRSNVIKALDQGAVCLNIDASKAGQTLSAEDLA KQEQEGVFGDVAGVGPGRNWAHVNSVDYDPTDDSIIISSRHQSAVIKIGRDKKVKWILSS PEGWREGWADKVLTPVDKDGKPIKCEGSKCEGSFDWSWTQHTAWRIDEKSDKDTVYITVF DNGDARGMEQPALAEDKYTRGVIYKIDQKKMTVEQIWEVGKDLGHEYYSPVTGLCGYEAD KNSVTVFYSTAGLSFQKKKGTAAAATSPHPYLYEYRWGETQPAVALKFTDVFGYQAFPIS VKKAFTDN >gi|319806062|gb|ADMF01000001.1| GENE 68 83606 - 84586 425 326 aa, chain - ## HITS:1 COG:RSc1092 KEGG:ns NR:ns ## COG: RSc1092 COG0583 # Protein_GI_number: 17545811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 22 316 2 294 300 84 27.0 4e-16 MPQQPAPSDEIIPAAPASVIHELKYIDLLLLKTLAETESLTKTSARIGISVAKASRMLSS LRKLFNNELVQRCGPRMIATPTLERLLPDIRAALKSLGKLFEHPLAFHPADIESRLVFAC TDNAYLALLAPALKRLAEEAPRLQISVSELDDQTLSKLSSGDIDFILGQDFLARKNDRFR HQRLLTCPHCVVVRRDHPMALAHPDGRITAGDLRGFRQVLPIIHRPSGFESPTRLSMNLA TAEAIRLPYFIAGFFTILQNDCFLAAPLAVAQRLSNWLPIELLHFDEGSQFLWTPEILWH ERTDASPLHQWVRSIVCSAAAAANTP >gi|319806062|gb|ADMF01000001.1| GENE 69 84789 - 87260 2217 823 aa, chain - ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 554 823 362 638 638 92 27.0 3e-18 MKKTIIAVATLAAASLAQATDTTWTSQSWTPASTGQTSWEGSSADKLIFNGTSSSNKNGD EWTNAQLFIQGTEGNSQKSTITGGTLEFISQNPATNDANNAPGVGYNAVVLGGNSSLTID VGTLLLGDSVIDQTDKKGGDRGIRLSGSNNTLTIYADRIVSYTGDEFIHVRQGNGSSVAN IGSADRRIGYFEAHTGWGKDDYGVALLQANEGNKVFLYADEAVLDGSTNSQGGVIGSGGW GEVHVDANKLTINGNICGSYGTMSNADKQLTLSVRAGTLDMTGDINVGNEAKGNSNFDRN TTVEIEADVLNLKGDIKVDNNKRTGSKAEGDNISAVNLTVNKTANIIGTIIASQTDGTST VTLGGAGDATASSGKYEVTGDGSSIVFKDSGSWVINEWKGTDGNLTASDSVKVDVNGAVQ TTSTTLNGTSTLTLNDGAKISSKTLEGSGGTFLINTADEQIINIGDYKNTDAQAVLSGSQ NDKYASADEAVKALEASVGSDTKLSLSAAEGAVADSWKVVDNGNGTTSLITQANQKLEGY NTINSLAVFSWRHELNNLQKRMGELRDLNGNIGAWARVFGSEQKYGDAGQVNKNTTIQIG ADVKVADAWTIGGAFSYTDGSVEATGISGDNKAYAFTAYGVWQHENGSYLDLTARYARLD ADFTAQTMTGSYNNNAYAVTAEVGHKFNLSELAFIEPQAEVIYGRVVGDDFTASNGTRFS QKDYDSLIGRLGARAGFNFPENKGNIYARFSVVHDFQGEVETTALNNTSRTVKDDFGGTW VEYGVGGNFRLSDTANVYVDLERTSGGEIQENWRWTIGARKVF >gi|319806062|gb|ADMF01000001.1| GENE 70 88151 - 90871 2398 906 aa, chain - ## HITS:1 COG:SMc04444 KEGG:ns NR:ns ## COG: SMc04444 COG3383 # Protein_GI_number: 15966762 # Func_class: R General function prediction only # Function: Uncharacterized anaerobic dehydrogenase # Organism: Sinorhizobium meliloti # 1 899 19 928 959 655 38.0 0 MFDFTIDGRIVSVKEGTTILEAARSAGLHIPTLCYLKNVSSIGSCRLCVVEVEGTAGLVS SCNTLVKPGMVVHTNSDAITAARRTALQLIIADHGLNTTQYCFSCPKNGSCELQDRCREL GVETTPFDVKPAGGPILDSNPFIAFNPALCIRCQRCVGACNNAAGNHTLITGRRGVRTSI LAPFAEDWKSTNCESCGNCAGACPTGAITMKRRRQYRSWEIQRVRTTCPHCATGCQYNLV VKNGRIVDTEALDGPTNHGLLCVKGRSASFDFVHSPQRLTTPLIRSKITGELEPASWDEA LDLVARRFGEIKARHGGSAIAAFACARSANEDIYMLQKMARTVFETNNVDNCARVCHGPS VAGLQRTLGSGAMTNPISDICENAQVILLVGSNPEEAHPVIGMQLRAAVARGTRLIVVDP RDIGLSKTADLHIKLKPGTNVAFANGIVRQLIHDDLIDHAFIECRTEGFADLKAMVEAYT PERVAQICAIDPRDLIAAARLYGRADRAAIVYCLGVTEHSSGTEGVMSLSNIAMVTGKYG RPGCGINPLRGQNNVQGACDMGASPGDLTGYQKIAATGIVEKFEKAWGTQLPRFKGLYAT DCFPKMIEGEVKGLFIFGEDPVRTDPDTHHVIKALKNLEFLVVDELFLTETAKYADVVLP GRSYAEKEGTFSNTERRVQRIRKAVEIPGTRADTDIFTDIMNRMGYPQPHLTPAQIMDEI ASVTPSFAGISHARLDGAENAGQGLQWPCTGPDHPGTPILHVGKFTRGLGRYSTAQYRDP SELPDSEYPLMLTTGRVLYQYNACAMTDKTEGINEISGRSFIELNTKDAERLGISNGDRV KVTSRRGAIDSVAHVSDKTNVGESWMPFHFQDGNCNWLTKAALDNICSTPEYKVCAVRVE KLGASA >gi|319806062|gb|ADMF01000001.1| GENE 71 90864 - 92732 1849 622 aa, chain - ## HITS:1 COG:TM1640 KEGG:ns NR:ns ## COG: TM1640 COG0493 # Protein_GI_number: 15644388 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Thermotoga maritima # 134 544 35 459 468 228 35.0 3e-59 MQAMKIEEKFVARLSVHSIPVTDARNEETMHGFARRIEATPPGQCALALQLSLLEASALQ TCGKCVPCRDGLPQLAKLMRRIVDCEAQPEDLGRLKTLAEFIRLGSDCAIGYDAAQMVLE SLTRFADEFKHHTEEQSCQKGIAQSVPCETFCPAHVDVPGYIALVAEGRSAEAVALIRKD NPFPTACGYVCEHPCEKRCRRTLIDAPINIRAIKKYACDQAAADTVPTPKRQPDTGRTIA VIGGGPAGLTCAYFLALMGHTVELYEEKKHLGGMMRYGIPAYRFPRERLDEDIRAILGVG NINVHLESPVGTDEMKALSQTCDAVFVAIGAHAAKKLRLPGIDAKGVISAVDMLRSIGDG VYPDYRGKKIAVIGGGNVAMDCVRTAVRAGAAEVNLVYRRRIEDMTALKEEIESAVAEGV EMLPLQAPVSIEVDASGACTALMMQPQMISAYSRGRPGVVNAQKPVERLEADLIVAAVGQ DVVSSPFEAFGMKTHWGAFTTDEFLAAEGFSNVFVGGDCQSGPTTVIKAVGAGKVAARNI DEMLGFHHYLDCGVAAPPPRMNDRTPKGRVNLIERPVKFRKRDFNEVEIGMSSEEVQQEC GRCLRCDCFGAGASCGGRIQYV >gi|319806062|gb|ADMF01000001.1| GENE 72 93308 - 93667 538 119 aa, chain + ## HITS:1 COG:ECs0611 KEGG:ns NR:ns ## COG: ECs0611 COG5569 # Protein_GI_number: 15829865 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 22 118 16 107 110 79 43.0 1e-15 MIRTFAALAALLTVGAVQAADMNMDMSGHEHHMMAGDHSMHMAAQSPAVQAVGVVKAIDA ANGKVTIEHEPIAALQWPAMTMRFTFKDPKLVEGLKAGDKIHFTFTQEGQLSVLQSIER >gi|319806062|gb|ADMF01000001.1| GENE 73 93892 - 95670 1534 592 aa, chain + ## HITS:1 COG:ECs0612 KEGG:ns NR:ns ## COG: ECs0612 COG0845 # Protein_GI_number: 15829866 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 127 512 26 399 407 329 50.0 1e-89 MTSPSPSTSSSPSTQTGRSPVLTVLAVVVALAAGAAAGGYAVWRHQSSLEHFAQRLGLLE STSASGAHSASAAPQTPAGVKLAQPDADGKPVLYWYDPMKPDVHFDKPGPSPFMDMDLVP KYAPVGAAAAKPKAKVKLAEPDADGKPVLYWYDPMKPDVHFEKSGPSPFMDMDLVPKYAS QADLSGGEDENLEPHGVVIDPTLTANLGLKTAKAEAGQLSLSRWFPAEVLVNGHHTAQVQ ARAEGFVESVAPVTVGDFVKKGQPLAQLTIPSWVEMQSEYLVLVELKRSRAELDAVLLRL KLAGMPDADIEALRRTKKVRTSFHIAAPIDGVLTAFALKNGMNVTKSDAVAAVEGLDPLW VTASVPERYAPYLPQAKFKLSVDAFPGRIWEASAPTVLPEGEAATRTLKLRFSVDNPNLE LRPGMTAKLLLAAPGAQGILVPSQAVIDDGRNPRVIVREGTRFIPKPVRILGESSGQTAL ASGVQPGEDVVVSGVFLIDSEANIEGALARMQPAADGLSANEGAAAPMPMPADPMKPASP DEAQSEPKGSMPQGMTHGAPDESLGTASKPQTVLDLSSPTPSAATQPQGAAK >gi|319806062|gb|ADMF01000001.1| GENE 74 95667 - 98804 3804 1045 aa, chain + ## HITS:1 COG:ybdE KEGG:ns NR:ns ## COG: ybdE COG3696 # Protein_GI_number: 16128558 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Escherichia coli K12 # 1 1045 1 1045 1047 1512 73.0 0 MIERVIRASVENRVLVLFGALLLAIAGIVAVLKTPVDALPDLSDVQVIIKTDYSGQAPEI VENEVTYPISTTMLSVPGASTVRGFSLFGTSFVYVLFEDGTDLYWARSRVLESLNSAAGK LPSGVTPELGPDATGVGWIYQYALVDKSGKNDLESLRALQDWFLKYELKTIPGVAEVASV GGAVKEYQIIPDPVKLEQYGVTVGDIKTALSASNQEAGGGSIEMGESEFMVRAQGYLKTL DDFRSIVLKTNASGTPTVLGDVAQVRLGPEMRRGIAELDGEGEVAGGIILLRTGGNAREV IAAVKTRLEELKSALPEGVEIVPVYDRSSLIDRAIQNLTHKLIEEFIVVALVCAIFLWHV RSALVAVITLPLGLALAFIAMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKHIEA WEEAHPGADLAGAERWQVITEAAVEVGPALFMSLLIITLSFIPIFTLEGQEGRLFGPLAW TKTWSMAASAFLAVVLVPVLMGLWIRGKIPPEDKNPLNRWLVRLYQPLLMGVLRRPKTTL FAALLVLIGGLYPVEKLGGEFLPQIAEGDILYMPSTLPGVSSSEAAAMLQKTDKLIRTVP EVATVFGKAGRADTATDSAPLEMIETTIQLKPESEWRPGMTMEKIIDELDKTVRLPGLAN LWVMPIRNRIDMLSTGVKSPIGIKVSGQSLADIDGAAEQIEEAAKTVPGVVSAIAERLTG GRYVEVSVDRLKAARWGLTVAGVQSYVKSAVGGEMAGDVVDGIARYPITIRFPQSWRDSP EALRNLPIISGSGQSLTLGDVAEIRTSLGPSMLRTENARPAAWVFVDARDRDMASVAGDL REAIAKSVSLKPGVSVAFSGQYELMERAKDRLTLMVPMTILIIFVLLYLAFRRFAESLLI LGSLPFALTGGIWLLYLLGDRLSVAVGTGFIALAGLAAEFGVVMIVYLRHAVQNDKSLAD PKTFTVEALDRAIEHGAALRVRPKTMTVAVVLAGLIPILVGTGAGSEVMSRIAAPMVGGM VTAPLLSLFVIPAAWKLIMLRRRKL >gi|319806062|gb|ADMF01000001.1| GENE 75 99428 - 100372 308 314 aa, chain + ## HITS:1 COG:BH0039 KEGG:ns NR:ns ## COG: BH0039 COG3344 # Protein_GI_number: 15612602 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 4 291 2 290 418 318 56.0 8e-87 MITLDQVLSGRNILRATKQVVSNKGAPGIDGMTVDQYEAHHRRHWRSIAEHIRAGSYIPA PVRRVDIPKPNGGTRMLGIPTVQDRVIQQAIAQILVEAYDPHFSNSSYGFRPGRSALEAI EQASRYIKEGKNWVVEMDLEKFFDTVNHDRLMARLAKRIKDKALLKLIGRYLRNGIMQNG LVSTREEGTPQGSNLSPILSLIVLDELDKHLESRGLSFCRYADDCNLFVSSRQAGERVLE KTIKFIEGTLKLRVNRSKSGLFRPSKSKFLGYTFVGTSGAPRVTKASFARLMYISSSRSC VEAAEDPSWERSRP >gi|319806062|gb|ADMF01000001.1| GENE 76 100375 - 100671 147 98 aa, chain + ## HITS:1 COG:no KEGG:Dret_0152 NR:ns ## KEGG: Dret_0152 # Name: not_defined # Def: RNA-directed DNA polymerase (reverse transcriptase) # Organism: D.retbaense # Pathway: not_defined # 3 94 364 455 466 105 55.0 4e-22 MILRGWRTYYALDDRKEVFERIDIHIHRHLRKLIWRAWKRLKTRERELRRRGLPSEQAWK SSVNGRGPWWNANAPHMLKAFPNSVFRRMGLYSLLSKA >gi|319806062|gb|ADMF01000001.1| GENE 77 101029 - 102150 1285 373 aa, chain - ## HITS:1 COG:RSp0955 KEGG:ns NR:ns ## COG: RSp0955 COG3203 # Protein_GI_number: 17549176 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 352 1 333 368 95 30.0 1e-19 MKKTLAALAVLGAFAGSAMAADVTLYGLVDYGFSYEHVDGDTADKDAQDTFQMKSGQNSG SRFGLKGTEDLGNGLKVGFVLENGFTADDGKMDNSDRLFGRESNLFVTGAFGTLSFGRVG QLASSNGSYGLLGRVSPFSSGWGDSIGTKFVTANGWTRFDNTVTYVTPAFAGAKVYAQYS FQNDSISQKDGVEGQSSVNRYYGIGATYDIGDLQLVATVDSINYASYGSYKSKIDDDSLT VTVGGNYNFGVIRIYAMGQYFDNASGVGQKSYEEDGTFGKGYVTENGLEGYGFSLGAAVP AFGGTFKAHVGYMDAEDVKDSDIDGKRWNIAGGYDYSLSKRTSVYAAAAYTKDDLGDRKP SATEVIAGLIHKF >gi|319806062|gb|ADMF01000001.1| GENE 78 102173 - 102307 84 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYPAQGVEQVFCQEAKFLFGLVIFIQGASLSKELLFLKNPSQQ >gi|319806062|gb|ADMF01000001.1| GENE 79 102831 - 104489 1071 552 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKTFKTIWNAVRSAYVTVNETVAGASQRGGARRAATLMTVSVGAALVSGMAAAGVQKYT GTDGQWSWTFYNFENGGYYDYFASVKQFTADNETISGAVDKVFTNDDLKLLQTVDATGEL GSSAPSFAQYKDKVDLWSVIAGASVQTSSETAVQWSDAAISIKTDALGRKDGDTPYTVMG TAVSDGAITFTGASTTISAENAAQNPADPTDSDSDRMNAIGVGFDNSLGQNAEITTRTVQ FNAATTAISAKVTGLADGLAVGLYGAMNTKSKPIVEINSDTTITAVNERANANAYGIWMD YTDGTQNNHRIWNDPGSVTVAAGKTLTITAEGKSAVGAMIDVGTLKINGAANLTAKGTDN AYGLLVRGHGHAIFNGETTIGTDGTGSGAQAAVVLVRNGAESVFEDDWTKGYEAENSEYG IPAPETTAEFNGKTTLNGKVSLGDNTTLKIGGDVTVNGDYVSNGVTSGSGSLTIVNGQNT VFTQASNAVSAQTSTSKDINVSLQLGKLTISGGEVTNNANMLISDTLAITGNAVFILKVV QNRHDTQVKMTF >gi|319806062|gb|ADMF01000001.1| GENE 80 104575 - 104953 146 126 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 126 1 124 570 147 57.0 1e-34 MGRPLTGKTHVGIRRETRSNGDVYVYERVTGYDPKTQKTKTLSTRLLGKILAGSTEMIPT RPKKKRSEVIEAPVQAVRTHVGLQKILEWAGHESGIDADLQRSFEIGDALKLSSIARYWV ATDGDT Prediction of potential genes in microbial genomes Time: Sun May 29 19:03:54 2011 Seq name: gi|319806039|gb|ADMF01000002.1| Sutterella wadsworthensis 3_1_45B cont1.2, whole genome shotgun sequence Length of sequence - 25191 bp Number of predicted genes - 18, with homology - 16 Number of transcription units - 7, operones - 5 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 411 328 ## Ppha_0277 transposase IS4 family protein + Prom 439 - 498 1.9 2 1 Op 2 . + CDS 535 - 3609 3107 ## Ent638_0501 outer membrane autotransporter + Term 3647 - 3691 11.2 + Prom 3638 - 3697 5.7 3 2 Op 1 . + CDS 3910 - 5376 608 ## 4 2 Op 2 . + CDS 5392 - 8190 2461 ## gi|237746809|ref|ZP_04577289.1| autotransporter beta-domain-containing protein + Term 8203 - 8238 3.5 + Prom 8437 - 8496 3.8 5 3 Op 1 1/0.000 + CDS 8566 - 9348 923 ## COG5266 ABC-type Co2+ transport system, periplasmic component 6 3 Op 2 . + CDS 9355 - 9975 471 ## COG0310 ABC-type Co2+ transport system, permease component 7 3 Op 3 . + CDS 9972 - 10592 444 ## Ddes_1472 hypothetical protein 8 3 Op 4 34/0.000 + CDS 10595 - 11317 407 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 9 3 Op 5 . + CDS 11314 - 11973 428 ## COG1122 ABC-type cobalt transport system, ATPase component + Term 12159 - 12190 0.1 10 4 Op 1 1/0.000 + CDS 12883 - 15063 1560 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 15080 - 15111 4.1 11 4 Op 2 30/0.000 + CDS 15134 - 15739 535 ## COG0811 Biopolymer transport proteins 12 4 Op 3 11/0.000 + CDS 15743 - 16150 420 ## COG0848 Biopolymer transport protein 13 4 Op 4 . + CDS 16150 - 17205 373 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Prom 17703 - 17762 5.6 14 5 Tu 1 . + CDS 17866 - 18654 283 ## + Term 18684 - 18724 -0.7 - Term 19425 - 19464 3.2 15 6 Op 1 . - CDS 19486 - 20349 741 ## gi|302860699|gb|EFL83776.1| hypothetical protein HMPREF0189_00854 16 6 Op 2 1/0.000 - CDS 20315 - 22027 1070 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components 17 6 Op 3 . - CDS 22100 - 24241 1950 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 24333 - 24392 2.6 + Prom 24318 - 24377 6.8 18 7 Tu 1 . + CDS 24410 - 25190 516 ## Amet_0623 transposase, IS4 Predicted protein(s) >gi|319806039|gb|ADMF01000002.1| GENE 1 1 - 411 328 136 aa, chain + ## HITS:1 COG:no KEGG:Ppha_0277 NR:ns ## KEGG: Ppha_0277 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 9 135 443 568 570 138 53.0 7e-32 SLRRAEGIRSREKIEELFATYKDSFDGRKPRTWYPENLYGRQFAQFVGLGYHCFLAKRIL DVKKALSEKETEGKTKEELSLEAKLLAWLNQHSLIQILDWFRCVDYVAATGNASASKWTT ETTRRDQLFLKMLGVK >gi|319806039|gb|ADMF01000002.1| GENE 2 535 - 3609 3107 1024 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0501 NR:ns ## KEGG: Ent638_0501 # Name: not_defined # Def: outer membrane autotransporter # Organism: Enterobacter_638 # Pathway: not_defined # 164 1001 479 1349 1371 186 24.0 4e-45 MHFQVGVVGGTWAEESKEFYDLAGNTAEDDTTELLLKLGLDTDTPAEQKLELAGGHFTTV GSNEKAQVKAVELLKNYSVAYTKGTYDYSKFTVNTDGNRTDDDKNLRIAGASVTTETLTL TAGSAAVESGSLSVAKLISNGKFEMSVADAGTMAVESFQGQQNGDFTLIAGKMAVEALDL TSGKLTINDTATLATSSDQIFKIGLDAEGKEESAGSKNWENLVFTGGTLTLTDEKYNANY ADSVKDILGSDTQVTYLGELVGGLTLDQAASIGGVHANTEIDATENVDKDGTVSVQADVG GKTINVGSASKVEVTSNTTLTLVGSSGDELINFSSTGDKAVDIQGTLKLGSVSVETSGKL TSTVNVEGTVAVENGSFDLIKLTTGTTSSTTAAIEVNKGSLNVGTLELNNGKATISVSDD AKMKVDELAAKAGEHIITGAVEVGKLAQDAANALIQIGTTGESGLKGALTIAEGGLKGLK FFLDPTWKDGMEVTDASSLRIAETNVDGQIVVGQNSYVSLGTTDDSAFVQLFKDGTLTWG GENGTLAAVYVAKPITIASTGSLVVDASLKIVPANDPATGSVTFAADSVLVANVKNFKDG DTAITVDNGASITVAESSKAVVIAEAGQTFQLTNSEEVNKNYWNKAGDTLISANKLVSFN VGADGKITTEAEDAEDVFAGLMQGAALANAGAASDNEAVKSYAEALLTDTTGKKSNAQIA REFDAAMNPAGTLGVFTTAKDRSTELRDAVRAHAGNGTANGLWAQVTGGKTKLKGISTGA QDLDLDTDAYGLAVGGEAALQNITLGAAFMGGSGKTENDSVAGKDDFNYYGISFYAKTQV QGIDLEGDVSAAWLKSDLTVGGAADVDTDTTTAVYSLGIQAKKTFNLGVDVTPFIGMDVY HIKSDGFTTNHGVSIEDANATIVEFPIGAEVKKALQTSSGFSVAPSFSLAVVPTVGCKDI DSKVRFAGAESTYNFTFADDVKVRSQLGIEAQKDNFTLGLAAGYDWGNEERSAASVQLRA KYAF >gi|319806039|gb|ADMF01000002.1| GENE 3 3910 - 5376 608 488 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIEMNKAFKIIWNTARGGYVVASEMQRAHGKTSRVKTAAAFALAGALALSAAVTAKTITN DNIQKETTTKLVSGDGELNIETAGDLRQLAEALKTGKLDAIRAALGVGSNAAGSTVTLVG AAGGNQYIDDNTLKILKLAKRFEQKLEPIYEKLVHQTVSKDKRPVVADKGTQIVVGENNK TPLVLGLTGADNVINLGAEVPILFQPHEMEVTRIGSSEITVHSGNLLAVTGGSVALNVNG PYLKASGFTVPLAAPSTTATVDGSTTITLQGSTTSAAVFTGGSAIALGGEATSNVTGTSH LSIGTKASSAGYEGMTLGAFGGGLSAATMGGTASSKVEKDTTVTITDGMAAGVFGGGAAM AAEFDGVWALLKGPLGHYADYIDWKGDTLLVAGTAETISRNVSLTVGGQAQTAGLAGGGL AVSSAGTDQAKAITTAKVGDVEITLGDADGSSIDAAAKSQLVSGVKEVLTLAKKLTEGGL SDITLSGA >gi|319806039|gb|ADMF01000002.1| GENE 4 5392 - 8190 2461 932 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|237746809|ref|ZP_04577289.1| ## NR: gi|237746809|ref|ZP_04577289.1| autotransporter beta-domain-containing protein [Oxalobacter formigenes HOxBLS] # 680 911 38 281 302 101 32.0 2e-19 MVAPNVHVGTIGGGAAIARTNPKLNQDSAAKSQAAAEAGNVTLNILSGYNVGTMAAGVAL SSGALSTKDAVTATSSVKSTAVNVLGGENVLLMGGGGAYATGSNGYASKVMAQANVDGTA TLTVQNGSVDGLYGGGMAIDDTNSEAVNAVANTKDVVIAVTGGEVNRANMDVILNTAHGN TPNSGLPPSNGSYAHESADLAKTADAAILGAGVATGAGASVATETVKINLTGGTVNGSVF GGGAATIGGSSKVTQAVITVDGSAVSGSVYGGGLAGSTNNSGYTGSEAYSRAASSVETAI VNLVSGSVTGDVYAGGYLYKGSDDAQSTVTEGTINLYSADVFQGQKLSGNGAQTAALNVG RFSKDFEKTVKLEGFTTITGSGGDLTNLEFSYGDKTESTIAGGAFFFTGVEPNAANRGKT LSIGSETAPVVAAFADIANAGKVMVTAGSTLGLGNGADLLSQTKRAAALTSNTPAVYASG NVNLTGSTILAGAGTAASAGLVVHNGTLVVDAAGKTNITNGTVTLEGDSILYFHNVGINL ADGETTQTGSLKLADAPSTVKVDNILWKYVYGTDTYTLAQKSAEEVAQTTGIKTAGVIDF YNRLPSVSPLKDRIKDEFFLGEANLKGGMNLAAAAGVQAAALQGLGLATDTAQKRASLSQ TFVDGVTCFAEVSGTRLDLGGNSSMNEINAELGGVIVGGEWTRSDMTFGGLANLGSGSVR GQSANAGVKNDVDYYGASLYAGKRFGQFNIVGQAGYLRTSNDLTDSSVGYAKADSVKTNV WTIGVRGEAAVQLYENSKLIPYVGLNYVRLNTDDYTVSNGTHVSSTHQSLWTVPVGLMFT GKTAAASGWTLQPLLDVAYVRSFGDKDVEATTTWGSTVGSVNMVVWAENVLRSRAGIEAQ KGALSLGIQGGAACGSDNMNSFFAQVSARYSF >gi|319806039|gb|ADMF01000002.1| GENE 5 8566 - 9348 923 260 aa, chain + ## HITS:1 COG:BMEI0641 KEGG:ns NR:ns ## COG: BMEI0641 COG5266 # Protein_GI_number: 17986924 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Brucella melitensis # 20 255 15 249 252 194 44.0 2e-49 MKLQLQFSTIAAAAVLSLSSAVAWAHFGIVIPEHSAVLEQKDANVHFTIAFAHPMERNGM TMAKPDAFYVVQDGRKTDLSGSLKADKLFEKASWQADYRFARPGVYQFVVEPKPYWEPAE DKFIVHYTKVIVPAYGDEDGWDKPAGVKTEIVPLTRPFANYAGNTFRGQLLVDGKPAAGA DVEVEYFNRDGKYEAPNDYFVTQVVKTDAQGIFAFTAPWAGWWGFAALTDADYKLKEAGA EKDVELGAVLWTEFTAPLVK >gi|319806039|gb|ADMF01000002.1| GENE 6 9355 - 9975 471 206 aa, chain + ## HITS:1 COG:HI1621 KEGG:ns NR:ns ## COG: HI1621 COG0310 # Protein_GI_number: 16273510 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, permease component # Organism: Haemophilus influenzae # 1 202 1 203 206 112 38.0 7e-25 MHIAEGVLSAPVLIAGAAAAAAGIAVGLKRLDESRLMTAGLVGAAFFIASLIHVPIGVSS AHLLLCGLVGVMLGVSAYPVIFTALLLQGVLFEFGGLTVLGVNTTTMGTGALAAGMLFHA LVHPGVSRRRLMIAGALAGAAGVLIAALMTACALAFSSEGFVASATALLAAHVPIMAAEA VITALVVDMIARTYPELLHLGEERPL >gi|319806039|gb|ADMF01000002.1| GENE 7 9972 - 10592 444 206 aa, chain + ## HITS:1 COG:no KEGG:Ddes_1472 NR:ns ## KEGG: Ddes_1472 # Name: not_defined # Def: hypothetical protein # Organism: D.desulfuricans_ATCC27774 # Pathway: not_defined # 13 204 49 264 266 144 43.0 2e-33 MNTSKIAAGALALLLCAGANAHRVNIFAWIEGDQVVTESKFSSGSRVQKGAVTVKNAADG SVLAAGVTDDAGGWRFDVTDAMRHAPKGLELEINAGEGHQNQWSIPADELAAADGAGASE LPAAVPVSTQMTQPAAPPKKDSAAAAMSEAELEAVFSRVLDKKLAPVYRELALSHDKTPG IPEIVGGMGWLIGLGGIAAWARRRRS >gi|319806039|gb|ADMF01000002.1| GENE 8 10595 - 11317 407 240 aa, chain + ## HITS:1 COG:BMEI0637 KEGG:ns NR:ns ## COG: BMEI0637 COG0619 # Protein_GI_number: 17986920 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Brucella melitensis # 27 240 45 254 254 71 27.0 2e-12 MRLILSPALRLAVPSILGTASAFLTTLSAAEAALLGAVVIRLAAWFSGEPLRLRRLAAVN GFLILIWCFTPWSTPGVTVASAGVFDITKEGLLLSLLVTMKCNAVFLLFDAFVPGMRLTE VASGLRAARLPMKLVTLLLFMTRETELLSRSYRSLSESVQLRGFRASMNKHSYQTLAAFI STLFIRAYARSRVLNEALILRGFSGHWPVPASGLKNAGEAGLLVLTIGLALLLLVWDFVS >gi|319806039|gb|ADMF01000002.1| GENE 9 11314 - 11973 428 219 aa, chain + ## HITS:1 COG:MJ1088 KEGG:ns NR:ns ## COG: MJ1088 COG1122 # Protein_GI_number: 15669276 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanococcus jannaschii # 6 216 3 218 279 145 37.0 5e-35 MMQTALLEVKNLSFSRSDRVIFRNAAFSLAPKESLGLCGPIGCGKTTLLRILTGLERPQT MSLSLEGVPVTAQKDFQRLRRKVGYVLQNPDDQLFFPEVIEDVMFGPLNLGLSYAQARTR ALDVLSMLGIANLAEDISFRLSGGQKRLVSIACILAMEPEVILLDEPTTALDPASVDRLT KTIESLQIAKLIVSHDFAFLKRVCGRMVTIRDAQILALE >gi|319806039|gb|ADMF01000002.1| GENE 10 12883 - 15063 1560 726 aa, chain + ## HITS:1 COG:FN0831 KEGG:ns NR:ns ## COG: FN0831 COG1629 # Protein_GI_number: 19704166 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Fusobacterium nucleatum # 50 723 18 695 698 530 43.0 1e-150 MPITFISSAAHTKRLTAQWSFKHSAVMAALLMACCSAQAQNARMDEDPASDDAIELKTTY VRPEYVEIERLRETKEIIVIPKEDIVERGNRTISDVLEGVPGVSVNTSGWGSIDLRGQGN DTANRNLQVMLDGAPITTLLNHPHSTNYDVVPVEELERIEIIPGGGSVLYGSGTAGGVIN ITTNLRSMKDPKTSAFGEWNSDGYRIGASVGARLNEKFSFLGTASKIDRDLYFKNTYRNS NYYSAGIRWDLTEKQSLTLRASRLEEDSQFIKTASARNIQKYGKDYVPPWTTQTVGVDEN GQLIKRRVRGYLNGDRAINSYNLSYANDLTDRLHLTADGFYSDGYFSNNQFGDQIIDQES KGLKLKLDIDYLEGSDLLLGFDYTKQSADFNYIGSWKKDSSGKFYGEPYSFLYDKTVIAL YGLNTLKWGDFSFTQGLRRELTKWGYDKTGNRIAGADTSDRWNTALELSAAWRYRDTGRI YARYERGYTVPDGLMIADQAVVNGDRVYKITNAEDEKYDMYEIGLRDKVAFSTVSVSLWM SNTNNQLYRMYVRGLSDARTLNLLQTRRWGADVSLQQTIGRLTLTESYSWLKGRSDYTSA GSRFMDEVGKDKIDFTRSGLQKVPQHSLSVLAKYDFTDNFSGDVRYTYYGKYNNFLSDAE KETDGIVKSRQIVDTSLHFKPWEHLEIYAGVTNLFNEKYYDYVSIGSWSLIPGRERTYFV GLRGTY >gi|319806039|gb|ADMF01000002.1| GENE 11 15134 - 15739 535 201 aa, chain + ## HITS:1 COG:FN1312 KEGG:ns NR:ns ## COG: FN1312 COG0811 # Protein_GI_number: 19704647 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 11 188 8 190 202 91 31.0 9e-19 MSQFIQIFLTGGFMMWPLLAASIVTIAIAVERTVFYRRSASDMQVLQGEFLSAVRAKNFD AAAALCKKAGGTVGAVLEKAIAERNAVINAEQYLSGAAAYSAARLKDHLNYVSAIVTLAP LMGLLGTVTGMIRSFDILSISEGQPFAITGGVAEALVATGFGLLVAIIAMLVYVWLSQRA NRIIEDLEAAASAYLACLSEK >gi|319806039|gb|ADMF01000002.1| GENE 12 15743 - 16150 420 135 aa, chain + ## HITS:1 COG:slr0678 KEGG:ns NR:ns ## COG: slr0678 COG0848 # Protein_GI_number: 16329551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Synechocystis # 16 131 41 156 269 78 31.0 4e-15 MRINSLKEDRKPLLMIIPMIDIIFFLLVFFMMSMLTMVTQKTIALNLPKATIAKVDTTKT VPVSITEDGRLFLEQNLVSEEELARRLVSLKTENEKLTVVLRGDEKTDYGTVVGVMDVIR RTGIERVSIATEGRR >gi|319806039|gb|ADMF01000002.1| GENE 13 16150 - 17205 373 351 aa, chain + ## HITS:1 COG:FN1310 KEGG:ns NR:ns ## COG: FN1310 COG0810 # Protein_GI_number: 19704645 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Fusobacterium nucleatum # 240 351 132 241 242 116 58.0 9e-26 MSPKPLSWQSALSASVVIHALLVGGIGLIFFQSAPVGGSGMLTVDLGGPAGNAGGLGDMH RDGRLGNGGAGGDGAKSHSKDRRLEPTDEPEKPLAPKTEGETLDEPPKAAAAETSLDSKP TPKAPELTSTQPTADSGDEQVKSAQAKPILKRQNPQPQVSKNIKPVSKPKRENSEGKAYK GETQKPAPLKEKASASETDGKDGKTKHVSAGSGGAVGASGTADGKAQTEGSGVGDGQGTA FGSGNFIANGDGSYTALGSGGISYKILSEAAPRYPRAARSIGFNKVVRVRVKFLVGLDGQ VETTEIITRNIPDLGFKEAAVEAVKKMKFAPIYHQGRNINVYFQKTIVFQP >gi|319806039|gb|ADMF01000002.1| GENE 14 17866 - 18654 283 262 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTVSIKKQILILILAAFSLNGACGMLDPKVDAAVKGLSPLNWPLTVNDLELWNKENLVVA KNEKELLAHYMRYYHAKSSSLKNEFYDGFLSRFWGYFVSCVASNPFHKQEISVFDVAYNH SFDMEYFYFLYGLPGGNAWSVDSKKIDEIRTNFYTMIKAYPKLKDYMAPEMYKYHPLMFA NKVFPPRLEVCVNRSGKVFAQMQEAQSFNEDPLNKAKGLKYQFQYEGTLNRRLAYKLYDT LIRKDGDVSQYVYEYSFKGAKK >gi|319806039|gb|ADMF01000002.1| GENE 15 19486 - 20349 741 287 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302860699|gb|EFL83776.1| ## NR: gi|302860699|gb|EFL83776.1| hypothetical protein HMPREF0189_00854 [Burkholderiales bacterium 1_1_47] # 3 283 7 282 291 181 37.0 6e-44 MGNPFIPFPRCENIIIVGDAAAEYLGALRIYGRGLIGGDVPSMELLHPMEKHLECVSCFL NDPTQVLMPAVRRMKANFVVLEENGSADFNPAAGREALEKEGISVKILDVRGSTESVLRR AGKLFGEEKQAERIIRERTERLAALDDVRKSIHKGQKAAIFLAIRSPVRHESYVFRISER SALSQLLTNTFAIENINVRPNAEERIPGIQELDDLSELFEKNPDLIVYTGDAAACGQKIT EFIRKHPQFAECNAVKNGRIYGAPYYCHALDLRRHEILEAWSDVLAD >gi|319806039|gb|ADMF01000002.1| GENE 16 20315 - 22027 1070 570 aa, chain - ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 21 555 24 556 564 284 33.0 4e-76 MFLNPRPSGLCRLITQYLFTRSQWRLWGLFAIVLAAYAFNIKLAVLYNDWNGRFFNALQA VNRDAIFRELFYFIGLAAVIIVLLVWAGYVKDRLALALRRDLTQIFFKRWLSPESAHYLL RESGREPDNPDQRVTEDVRQLVNLSVDLLVSFYDAMLTIGSFSVILWQLSGSAELFGITI PGYMFWVCILYTIVATWITHLIGHKLKGLNINAQHMEANLRAALMEKRRHADAIAGAHAE AVEEAGLVERFRQLLSVLIALVKRKRDLNLFTVGVGQFTHLAPIFFALPSFFAGIIQLGG LMQIRGAFNDVARSLSWIIMSYDDLAALAAAYERLRRLEAGLSEADDQRQALEKRCQDNS CTGLTAALDLIVPNGKNISRVPVHLKLVPGSFTIVCGPSGIGKSTLLKVLSGFAGNYEGK LSERGSIFWMPQQPYLPKGELIAALTYPQSPETITEQAAQELLSAAHLDHLKEKLYDSGD WSALLSGGEQQRLSLLRALIVKPDILLLDEMTSGLDPVNAHWMIALLKAKLPQTAILLVT HQQSLWPLADHIINLQGPAHGQSVHSVSQM >gi|319806039|gb|ADMF01000002.1| GENE 17 22100 - 24241 1950 713 aa, chain - ## HITS:1 COG:CC2194 KEGG:ns NR:ns ## COG: CC2194 COG1629 # Protein_GI_number: 16126433 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Caulobacter vibrioides # 52 603 18 613 733 155 25.0 3e-37 MRIILIIKVVCSLQTQTALSTEIGMSPSNIYHSPHFSFRPLVLTISFLFAGMNSAAAAED STPKATYIDTQPIVVTATRTTQPLSQAASSLSVLTEQDIQEDQPVTLGELLLDIPNVDVL DFAYISSQISIRGSNSSQITYLIDGMRQDDQTMAGNRPSGIFIDPEILKQVEVKHGGGSA LYGNGGIGGTLAVTTMNANDFLKGTDRNFGAKVKAGYTSDNLEWQKSAYAFGRSNQWDVV FGVSRRDSGASTNSLTGKRSKADIDAYSTAAFGKASFMPNGANVLSLSYNFDRANSESDT FYRYEQQRVTGKWEFERGDLWNLTAALQYAHSKFHYVNPDPFRGINSKDKFDSVSGNVQN TSYLNGLGRHAVTYGFDFSKTSQSGLVLDQTTNEWNKDSTRPDADGFDGGFFIEDEYKIN GLFSVVPVVRFNYFKRESNTGFPSLSDSKVTPGITLKMTPYESLLFWGSVHTGYRPPMLD EMYFYSTDYGQNVEVINNPNLKPEKSTNYEVGMSGLFGDLLTENDHLSWRVAVFYDDVKD FISVQDNMLEWWQGGMVGPIKYQTVNYGHVVNKGAELSGTYELNGFKASASYGYLHSEDK ETGERLGGVTPQSANLRLSYKIAAAQLEPWYRLHWAKGGDTVPFPGYAATHLDGYTLHSV GINWTPKIPNYFNIQAGLAVTNLTNEKYVALFGMRENNVGYARGFRAWLSAQF >gi|319806039|gb|ADMF01000002.1| GENE 18 24410 - 25190 516 260 aa, chain + ## HITS:1 COG:no KEGG:Amet_0623 NR:ns ## KEGG: Amet_0623 # Name: not_defined # Def: transposase, IS4 # Organism: A.metalliredigens # Pathway: not_defined # 19 257 12 219 535 74 25.0 3e-12 MMKKASNKWYFTKETNAKGLCYIYAYQTQWDPVTKKSKRSARKYVGRLAADSVVNITAKF RTEFPQYAQGTFYFGLDKTLVDEAAYRRDFPNAPGPKPAEAEIDTALWDTRSLGFTWALE QLAAQSQVLEHLREIFKEDARSLLNLAIYKLDGGNSMAAMEDWRASVYLPHGPALKSQRI SEVLSRVTPKDFARYFHLRHQSKIERMSGTDCVHYALDNTTISSYSATIADVAYGHAKRD PELPVLNFTFVCDQDSGDIV Prediction of potential genes in microbial genomes Time: Sun May 29 19:06:30 2011 Seq name: gi|319805896|gb|ADMF01000003.1| Sutterella wadsworthensis 3_1_45B cont1.3, whole genome shotgun sequence Length of sequence - 203468 bp Number of predicted genes - 152, with homology - 122 Number of transcription units - 103, operones - 31 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 9 - 587 488 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein + Term 598 - 624 -0.6 + Prom 961 - 1020 2.6 2 2 Op 1 . + CDS 1086 - 1484 300 ## 3 2 Op 2 35/0.000 + CDS 1484 - 3283 270 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 4 2 Op 3 . + CDS 3280 - 5040 258 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 5085 - 5139 1.3 + Prom 5318 - 5377 1.8 5 3 Op 1 . + CDS 5407 - 5925 277 ## gi|302860287|gb|EFL83364.1| lipid A export permease/ATP-binding protein MsbA 6 3 Op 2 . + CDS 6023 - 6997 744 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 7 3 Op 3 . + CDS 7016 - 8533 1322 ## Tlet_1185 hypothetical protein 8 3 Op 4 . + CDS 8596 - 8955 96 ## Tlet_1187 hypothetical protein + Term 8981 - 9028 5.6 9 4 Op 1 . + CDS 10190 - 10516 104 ## + Term 10557 - 10602 8.4 10 4 Op 2 . + CDS 10615 - 11586 637 ## COG3039 Transposase and inactivated derivatives, IS5 family + Term 11604 - 11641 2.1 + Prom 12121 - 12180 3.4 11 5 Tu 1 . + CDS 12299 - 12787 56 ## 12 6 Tu 1 . - CDS 12798 - 12998 75 ## - Prom 13027 - 13086 4.8 + Prom 13277 - 13336 3.3 13 7 Tu 1 . + CDS 13515 - 13841 125 ## + Term 13888 - 13922 5.2 + Prom 14226 - 14285 1.6 14 8 Tu 1 . + CDS 14306 - 14644 224 ## + Term 14832 - 14864 -1.0 15 9 Op 1 . - CDS 14720 - 14941 163 ## 16 9 Op 2 8/0.000 - CDS 15037 - 15681 498 ## COG4566 Response regulator 17 9 Op 3 . - CDS 15678 - 17480 1147 ## COG0642 Signal transduction histidine kinase 18 9 Op 4 . - CDS 17568 - 19373 1821 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 19572 - 19631 2.6 - Term 19553 - 19596 9.1 19 10 Tu 1 . - CDS 19663 - 23616 4098 ## gi|237745998|ref|ZP_04576478.1| predicted protein - Prom 23730 - 23789 4.5 - Term 23949 - 23997 7.1 20 11 Op 1 19/0.000 - CDS 24073 - 24954 755 ## COG0083 Homoserine kinase - Term 24976 - 25024 5.9 21 11 Op 2 . - CDS 25042 - 26526 1615 ## COG0498 Threonine synthase - Prom 26600 - 26659 3.3 22 12 Op 1 . + CDS 27181 - 28389 1351 ## COG0460 Homoserine dehydrogenase 23 12 Op 2 13/0.000 + CDS 28410 - 29720 1553 ## COG0527 Aspartokinases 24 12 Op 3 . + CDS 29852 - 30892 1391 ## COG0136 Aspartate-semialdehyde dehydrogenase + Term 30963 - 31009 -0.8 25 13 Op 1 . - CDS 31000 - 32247 1287 ## COG1524 Uncharacterized proteins of the AP superfamily 26 13 Op 2 . - CDS 32282 - 33871 741 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 27 13 Op 3 49/0.000 - CDS 33868 - 34779 1020 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 28 13 Op 4 5/0.000 - CDS 34797 - 35654 533 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 29 13 Op 5 . - CDS 35669 - 37195 1865 ## COG0747 ABC-type dipeptide transport system, periplasmic component 30 13 Op 6 . - CDS 37198 - 38484 633 ## BB1009 hypothetical protein - Prom 38513 - 38572 2.4 + Prom 38519 - 38578 6.8 31 14 Tu 1 . + CDS 38598 - 39269 655 ## COG1802 Transcriptional regulators 32 15 Tu 1 . - CDS 39366 - 40025 816 ## COG1280 Putative threonine efflux protein + Prom 40165 - 40224 1.5 33 16 Tu 1 . + CDS 40442 - 42013 1812 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 42055 - 42102 7.1 - Term 42043 - 42089 7.1 34 17 Tu 1 . - CDS 42142 - 43125 688 ## COG0583 Transcriptional regulator - Prom 43151 - 43210 1.5 - Term 43215 - 43245 -0.9 35 18 Tu 1 . - CDS 43271 - 44461 1379 ## COG3203 Outer membrane protein (porin) - Term 44583 - 44621 1.3 36 19 Tu 1 . - CDS 44638 - 46461 2589 ## EFER_3637 putative arylsulfatase; possibly exported - Prom 46621 - 46680 1.8 - Term 46657 - 46697 5.8 37 20 Tu 1 . - CDS 46784 - 47926 1694 ## COG3203 Outer membrane protein (porin) - Term 48058 - 48097 -0.5 38 21 Tu 1 . - CDS 48266 - 49798 2254 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 49969 - 50028 5.4 + Prom 50072 - 50131 3.6 39 22 Tu 1 . + CDS 50190 - 51107 1127 ## COG0679 Predicted permeases 40 23 Op 1 . - CDS 51457 - 52134 128 ## 41 23 Op 2 . - CDS 52135 - 52491 177 ## - Prom 52734 - 52793 2.3 - Term 53437 - 53484 3.2 42 24 Tu 1 . - CDS 53570 - 53851 278 ## Arch_0466 addiction module antitoxin, RelB/DinJ family - Prom 53892 - 53951 3.2 - Term 54015 - 54056 1.4 43 25 Tu 1 . - CDS 54060 - 54329 68 ## 44 26 Tu 1 . + CDS 54198 - 55685 1660 ## COG3264 Small-conductance mechanosensitive channel + Term 55803 - 55834 3.9 - Term 55720 - 55759 8.4 45 27 Tu 1 . - CDS 55834 - 57405 1761 ## COG0471 Di- and tricarboxylate transporters - Prom 57510 - 57569 2.9 - Term 57858 - 57905 13.1 46 28 Tu 1 . - CDS 57946 - 59052 1009 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 59260 - 59319 2.7 - Term 59339 - 59375 7.1 47 29 Op 1 2/0.095 - CDS 59434 - 60141 1017 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 48 29 Op 2 6/0.000 - CDS 60183 - 60896 762 ## COG0289 Dihydrodipicolinate reductase 49 29 Op 3 . - CDS 60910 - 61800 1096 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 61830 - 61889 1.8 - Term 62392 - 62442 15.4 50 30 Tu 1 . - CDS 62461 - 63153 701 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Prom 63196 - 63255 3.1 - Term 63594 - 63641 5.1 51 31 Tu 1 . - CDS 63742 - 66444 1666 ## JJD26997_1041 autotransporter beta-domain-containing protein - Prom 66598 - 66657 7.0 - Term 67707 - 67755 6.2 52 32 Tu 1 . - CDS 67820 - 69019 1557 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase - Prom 69237 - 69296 4.3 53 33 Tu 1 . - CDS 69392 - 70579 801 ## 54 34 Tu 1 . - CDS 70873 - 72411 1488 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 72408 - 72467 2.8 55 35 Tu 1 . + CDS 72635 - 74131 1910 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 74184 - 74225 -0.7 56 36 Tu 1 . - CDS 74222 - 74938 568 ## gi|302860184|gb|EFL83261.1| putative cyclic nucleotide-binding domain protein - Prom 75173 - 75232 4.3 + Prom 75236 - 75295 4.9 57 37 Tu 1 . + CDS 75329 - 76777 1569 ## COG3264 Small-conductance mechanosensitive channel + Term 76809 - 76844 0.2 + Prom 77365 - 77424 6.2 58 38 Tu 1 . + CDS 77651 - 78331 260 ## 59 39 Tu 1 . + CDS 78876 - 80378 771 ## CCV52592_1393 putative high-molecular-weight surface-exposed protein + Term 80492 - 80527 6.1 + Prom 80670 - 80729 1.8 60 40 Tu 1 . + CDS 80828 - 82408 1629 ## COG2461 Uncharacterized conserved protein + Prom 83183 - 83242 7.7 61 41 Tu 1 . + CDS 83448 - 86144 1299 ## Dvul_2968 outer membrane autotransporter + Term 86261 - 86307 1.1 - Term 86139 - 86179 6.3 62 42 Tu 1 . - CDS 86246 - 88066 2798 ## EFER_3637 putative arylsulfatase; possibly exported - Prom 88155 - 88214 3.0 63 43 Tu 1 1/0.095 + CDS 88218 - 89231 557 ## COG0583 Transcriptional regulator + Prom 89415 - 89474 3.8 64 44 Tu 1 . + CDS 89506 - 90495 774 ## COG2378 Predicted transcriptional regulator + Term 90526 - 90562 1.1 65 45 Tu 1 . - CDS 90550 - 91050 187 ## - Prom 91280 - 91339 3.2 + Prom 91140 - 91199 1.6 66 46 Op 1 . + CDS 91229 - 91807 692 ## COG1247 Sortase and related acyltransferases + Term 91839 - 91876 1.5 + Prom 91876 - 91935 2.9 67 46 Op 2 . + CDS 91992 - 93029 904 ## COG0657 Esterase/lipase + Term 93092 - 93143 12.1 68 47 Tu 1 . + CDS 93456 - 94268 1146 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 94296 - 94334 3.9 69 48 Tu 1 . - CDS 94601 - 94909 262 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein - Term 95010 - 95054 3.0 70 49 Op 1 . - CDS 95122 - 95316 70 ## 71 49 Op 2 . - CDS 95289 - 95516 107 ## 72 49 Op 3 . - CDS 95500 - 95778 260 ## - Prom 95938 - 95997 4.9 73 50 Tu 1 . - CDS 96079 - 96939 471 ## - Prom 97041 - 97100 2.8 + Prom 96933 - 96992 2.6 74 51 Tu 1 . + CDS 97127 - 97426 224 ## + Term 97643 - 97681 1.2 + Prom 98236 - 98295 2.1 75 52 Op 1 . + CDS 98320 - 98538 97 ## 76 52 Op 2 . + CDS 98492 - 98881 193 ## + Prom 98916 - 98975 6.4 77 53 Tu 1 . + CDS 99001 - 100854 1372 ## COG5421 Transposase + Term 100913 - 100958 0.1 + Prom 100926 - 100985 4.5 78 54 Op 1 40/0.000 + CDS 101145 - 102893 722 ## COG0642 Signal transduction histidine kinase 79 54 Op 2 . + CDS 102905 - 103630 550 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 103659 - 103718 2.5 80 55 Op 1 . + CDS 103791 - 105074 1096 ## CCV52592_1707 citrate transporter + Term 105080 - 105144 4.6 81 55 Op 2 . + CDS 105154 - 106146 778 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 82 56 Tu 1 . + CDS 106269 - 107453 108 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Term 107643 - 107680 2.4 83 57 Tu 1 . - CDS 107697 - 108614 980 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 108656 - 108715 2.9 + Prom 108819 - 108878 2.5 84 58 Tu 1 . + CDS 109121 - 111322 1809 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Term 111346 - 111392 9.2 85 59 Tu 1 . - CDS 111425 - 112954 1273 ## COG0703 Shikimate kinase + Prom 113134 - 113193 3.1 86 60 Op 1 8/0.000 + CDS 113333 - 115120 605 ## COG0642 Signal transduction histidine kinase 87 60 Op 2 . + CDS 115164 - 115739 262 ## COG4566 Response regulator 88 61 Op 1 . + CDS 115850 - 117547 1512 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 89 61 Op 2 . + CDS 117634 - 118002 165 ## GM21_4127 flavocytochrome c (EC:1.3.99.1) + Term 118081 - 118109 1.3 + Prom 118216 - 118275 2.8 90 62 Op 1 2/0.095 + CDS 118362 - 119576 1095 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 91 62 Op 2 . + CDS 119622 - 121199 1880 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 121220 - 121267 11.5 + Prom 121250 - 121309 1.7 92 63 Tu 1 . + CDS 121441 - 123195 2433 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 123230 - 123271 9.4 + Prom 123301 - 123360 3.3 93 64 Tu 1 . + CDS 123400 - 124572 851 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 124633 - 124674 2.6 94 65 Tu 1 . - CDS 124558 - 124686 64 ## - Prom 124777 - 124836 3.4 - Term 124785 - 124830 11.5 95 66 Tu 1 . - CDS 124922 - 126274 1548 ## COG0477 Permeases of the major facilitator superfamily + Prom 126715 - 126774 2.3 96 67 Tu 1 . + CDS 126843 - 128051 1238 ## COG0502 Biotin synthase and related enzymes + Term 128085 - 128127 10.3 - Term 128073 - 128115 8.9 97 68 Op 1 . - CDS 128142 - 129068 934 ## COG0679 Predicted permeases - Prom 129153 - 129212 2.5 - Term 129099 - 129127 -0.3 98 68 Op 2 . - CDS 129227 - 131707 2136 ## COG0178 Excinuclease ATPase subunit - Term 131712 - 131750 8.4 99 68 Op 3 . - CDS 131784 - 132368 599 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Prom 132457 - 132516 2.8 - Term 132586 - 132623 5.3 100 69 Op 1 6/0.000 - CDS 132659 - 134197 1541 ## COG3051 Citrate lyase, alpha subunit 101 69 Op 2 6/0.000 - CDS 134200 - 135069 1071 ## COG2301 Citrate lyase beta subunit 102 69 Op 3 . - CDS 135092 - 135352 271 ## COG3052 Citrate lyase, gamma subunit 103 69 Op 4 . - CDS 135409 - 136083 901 ## COG3493 Na+/citrate symporter 104 69 Op 5 . - CDS 135803 - 136807 567 ## COG3493 Na+/citrate symporter - Prom 136880 - 136939 3.6 105 70 Op 1 9/0.000 - CDS 136948 - 137616 321 ## PROTEIN SUPPORTED gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 106 70 Op 2 . - CDS 137627 - 139159 1561 ## COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism - Prom 139312 - 139371 3.4 + Prom 139227 - 139286 3.2 107 71 Op 1 . + CDS 139433 - 140464 668 ## COG3053 Citrate lyase synthetase 108 71 Op 2 . + CDS 140461 - 141879 692 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase + Prom 142031 - 142090 3.9 109 72 Tu 1 . + CDS 142298 - 143515 1211 ## COG3203 Outer membrane protein (porin) 110 73 Tu 1 . - CDS 143642 - 144190 685 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 144274 - 144333 1.7 + Prom 144394 - 144453 3.0 111 74 Op 1 8/0.000 + CDS 144533 - 146623 1397 ## COG0642 Signal transduction histidine kinase 112 74 Op 2 . + CDS 146620 - 147315 689 ## COG4566 Response regulator + Term 147421 - 147468 -1.0 113 75 Tu 1 . + CDS 147823 - 148032 72 ## 114 76 Tu 1 . + CDS 148296 - 151031 2701 ## COG0474 Cation transport ATPase + Term 151116 - 151166 4.3 115 77 Tu 1 . + CDS 151462 - 152946 57 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - Term 153008 - 153049 4.2 116 78 Op 1 8/0.000 - CDS 153226 - 154185 1102 ## COG3301 Formate-dependent nitrite reductase, membrane component 117 78 Op 2 . - CDS 154185 - 154844 488 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 - Term 154909 - 154953 0.1 118 79 Tu 1 . - CDS 154967 - 156052 1566 ## Shewana3_0489 cytochrome c, putative 119 80 Op 1 . - CDS 156175 - 157140 1061 ## DMR_29720 hypothetical protein 120 80 Op 2 5/0.000 - CDS 157168 - 159273 2706 ## COG2414 Aldehyde:ferredoxin oxidoreductase 121 80 Op 3 . - CDS 159298 - 160002 770 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 + Prom 160671 - 160730 6.2 122 81 Tu 1 . + CDS 160838 - 162034 816 ## COG0303 Molybdopterin biosynthesis enzyme + Term 162151 - 162192 1.4 + Prom 162347 - 162406 4.0 123 82 Tu 1 . + CDS 162433 - 162720 309 ## - Term 162669 - 162711 -1.0 124 83 Op 1 2/0.095 - CDS 162735 - 163961 951 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 125 83 Op 2 . - CDS 163993 - 164817 1035 ## COG0447 Dihydroxynaphthoic acid synthase - Prom 164906 - 164965 4.5 - Term 164987 - 165035 11.2 126 84 Tu 1 . - CDS 165106 - 166404 1077 ## COG2195 Di- and tripeptidases - Prom 166509 - 166568 1.8 + Prom 166472 - 166531 3.5 127 85 Tu 1 . + CDS 166559 - 167446 942 ## CJE1799 hypothetical protein + Term 167650 - 167682 -0.2 + Prom 167503 - 167562 1.7 128 86 Op 1 . + CDS 167731 - 169038 1110 ## COG0477 Permeases of the major facilitator superfamily 129 86 Op 2 . + CDS 169004 - 169225 78 ## - Term 169197 - 169237 8.0 130 87 Tu 1 . - CDS 169333 - 171159 2846 ## EFER_3637 putative arylsulfatase; possibly exported - Prom 171243 - 171302 3.4 + Prom 171137 - 171196 1.9 131 88 Op 1 . + CDS 171318 - 172289 803 ## COG0583 Transcriptional regulator 132 88 Op 2 . + CDS 172577 - 176164 2132 ## Spro_3913 outer membrane autotransporter + Term 176237 - 176287 13.6 - Term 176224 - 176275 17.1 133 89 Tu 1 . - CDS 176299 - 177075 970 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 177269 - 177328 4.6 - Term 177365 - 177416 5.0 134 90 Tu 1 . - CDS 177452 - 178225 990 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 178306 - 178365 2.5 + Prom 178448 - 178507 5.5 135 91 Tu 1 . + CDS 178573 - 178992 356 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 136 92 Op 1 . - CDS 179503 - 181080 1604 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 137 92 Op 2 . - CDS 181095 - 181466 255 ## Dacet_2625 fumarate reductase flavoprotein subunit precursor - Prom 181689 - 181748 8.5 138 93 Op 1 40/0.000 - CDS 181756 - 182499 510 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 139 93 Op 2 . - CDS 182504 - 184948 801 ## COG0642 Signal transduction histidine kinase 140 93 Op 3 . - CDS 184945 - 186642 744 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 141 94 Tu 1 . - CDS 186760 - 186996 66 ## 142 95 Tu 1 . + CDS 186995 - 188623 1394 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold + Term 188634 - 188682 5.2 + Prom 188652 - 188711 2.6 143 96 Tu 1 . + CDS 188896 - 190002 862 ## COG5271 AAA ATPase containing von Willebrand factor type A (vWA) domain + Term 190042 - 190084 -0.7 144 97 Tu 1 . + CDS 190153 - 192381 1303 ## Ppro_0210 von Willebrand factor, type A + Term 192479 - 192535 -0.4 145 98 Tu 1 . - CDS 192264 - 192536 63 ## + Prom 192480 - 192539 4.5 146 99 Tu 1 . + CDS 192565 - 194832 727 ## + Term 194933 - 194967 2.1 147 100 Op 1 . + CDS 194968 - 197118 1419 ## Daro_2598 hypothetical protein 148 100 Op 2 . + CDS 197120 - 197770 365 ## + Prom 197809 - 197868 3.3 149 101 Tu 1 . + CDS 197954 - 199078 1249 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 199164 - 199209 11.0 + Prom 199278 - 199337 1.9 150 102 Tu 1 . + CDS 199393 - 200160 792 ## COG0560 Phosphoserine phosphatase + Prom 200651 - 200710 1.6 151 103 Op 1 . + CDS 200935 - 203010 2055 ## + Term 203013 - 203042 -0.5 + Prom 203016 - 203075 6.7 152 103 Op 2 . + CDS 203095 - 203467 240 ## Predicted protein(s) >gi|319805896|gb|ADMF01000003.1| GENE 1 9 - 587 488 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 4 192 398 584 584 122 38.0 1e-26 MEELRLQVQQVLDLKNANKQVPPEKWLTYKRFVCERTTAQGHRYWDRDDNAIEAALRYAG RFAIRTNAEANPFKALSIYRLRGQVEQDFNQFKNWVDGNRLRCTDTAYWGKLLVCTLATS LRMMAIKGAHDREQGNRKIPNNSIDCLFTILKQIQADKRHTANAWVTRTITKKQRDMLAL LGLENPPRVLKN >gi|319805896|gb|ADMF01000003.1| GENE 2 1086 - 1484 300 132 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPAAQINPSSSVLTAAVSTERERPDFPSDKKRRDALVLFNCGLGYSKVADILELNPNTVR DWAKSFLAGKFKTELSKTQFRYSEDFKLRCVTMRQSGMSWSAIEREMGVAQATVRRWVRA AEAKKTGKGDLV >gi|319805896|gb|ADMF01000003.1| GENE 3 1484 - 3283 270 599 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 341 573 119 351 398 108 32 2e-22 MAGSNITCRLFAAFERFKNPNLIRLAKYLPAYKGKIGLAVCCMLTAGLSSSLIATLLGRL TDAGFYQQQAWVVLAAPIGLILISLLHGGSMFGSNYLLGQVSQSILAELRRQIFHRMLHW PAETYQTNSTGLVTSKFVFEANFALSNAAKSAITLVRDSIQVAALTVVLFWHNWELAMIA LVIGPFVVWLLRYISAKMKKVMSSSQANIAELLVRVKETYGAERLVKISNAYEQETSRFA RLNADIKDLMIRMTKASSLGTPLTQLLCMTGIAVVLTIAMYQTQAGLLTIGEFVTFLAAL LLIMPPLRHLAGLNASFVMMTVAAESLFATLDLQEEPDQGTEQLSKDIKNVVFDSVGLRY PGAERDAVESVSFAIEKGRAIALVGLSGSGKTTIVNMLPRFWNPTSGRILINGVDAQRYT LSSLRSQIAIVSQDVLMFDDTIRANITYGCPNASDEDIGRAVADAALTDFVESLPQGLDT PVGEAGDRLSGGQKQRISIARAFLKNAPILILDEPTSALDGVSEAQIKEALTRLMAGRIT LIVAHRLTTIEHADQILALTDGRIVESGSWQELIERNGLFAKLCRLQGISAKGEQEDAA >gi|319805896|gb|ADMF01000003.1| GENE 4 3280 - 5040 258 586 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 330 569 118 353 398 103 30 5e-21 MNFLRRVFANGLDADLIRLFRMLLPYKGLIALACIFLIGAASMSSLTATLLGKLTDLGFY QEEKWVIFAAPAALIGVSLLFAVSTVMSSILMAKVSQSVLVTLRIELFERMLHWPAEAYQ QFSTGTVSSKFVNEANIALSGATNSIIVLVRDIVQVIALLAVLFWHNWQLTLVAFVIAPG LAFILRAISRRMRMIVKRSQEALAAMISRVQESYGAARIVKVAGTYDFEDERFAQVNGRI RSLAMKTIQTQSLSTPLTQMLTMVAIAFVVGAALFQAQQGLLTFGEFITFLAALLLLRTP IQALSGLNGTFAAMSTAAKSIFEMLDAEPELDKGTINLDRAKGEIRFEHVFLKYPGQTEF ALQDINLTIKPGEHVALVGQSGSGKTSIVNLIPRFWEPTEGRITLDGHDIRNLTLESLRR QISIVSQDVVLLDATIRENLTYGLPNVSNEAVWAALDAAALKDFVASLPDGLNARVGEGS GLLSGGQKQRLSIARAILKDAPVLILDEATSALDSEAESAVKQAIDVLTKGRTVFVVAHR FSTVENADRIFAMDNGAIVEVGTKAELLARQGLFARLYTAIDSCGR >gi|319805896|gb|ADMF01000003.1| GENE 5 5407 - 5925 277 172 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302860287|gb|EFL83364.1| ## NR: gi|302860287|gb|EFL83364.1| lipid A export permease/ATP-binding protein MsbA [Burkholderiales bacterium 1_1_47] # 4 95 114 205 580 77 40.0 4e-13 MSVKFVNKDTIALSGATESFMVLVRDSMLAVALLAVTFWHNWQLMLMTVFLVAASPFVLC SISLRRRLIVKASQDNVGAMHSRVEESYGAQKLVQAACSCDSDGRHFAPVKAALARLARG KTTVTTIADTDWIVVLDNGVVHEQVTQAELLVRPSGLFHQLYKLQTAGRTHP >gi|319805896|gb|ADMF01000003.1| GENE 6 6023 - 6997 744 324 aa, chain + ## HITS:1 COG:XF1413_1 KEGG:ns NR:ns ## COG: XF1413_1 COG0794 # Protein_GI_number: 15838014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Xylella fastidiosa 9a5c # 3 206 11 214 216 229 57.0 4e-60 MSMTDDEILAEGCRVFNLERQALEKVENDLGAPFVAAVRLILQTKGNVIFSGVGKSGHIG RKLAATFSSTGTTSFFVHSDEAAHGDLGMIRPGDVFVGISFSGESSELMTCVPALKAMGI PIIAMTGKPRSSLARVADVALVTAIDREACPLNLAPTASTTVTMALGDAIAGALIIAKSF SAEDFARSHPAGALGRRLLMKVSDVMRGPENIPTVGLDDPAMDALDVLAKKHLGCFVVTD HGKLAGIFTEGDFIRALKNDTDLKSLKARDLMNPTPKSVQADESAFYAMSLIRKFQINQL VVVDDRNAVVGLVHIHDLVAAKIN >gi|319805896|gb|ADMF01000003.1| GENE 7 7016 - 8533 1322 505 aa, chain + ## HITS:1 COG:no KEGG:Tlet_1185 NR:ns ## KEGG: Tlet_1185 # Name: not_defined # Def: hypothetical protein # Organism: T.lettingae # Pathway: not_defined # 2 505 5 497 497 432 45.0 1e-119 MHVIIQAGGKGTRLESLTRNRPKCLVPVDNRPMIFWTFEAFKGADFSVICDYKADVLERY LAAFGAQYSVKIVSADGTGTISGIEQVVSQIRDDEPILIVWCDLFFEKDYRVPEALTERP LKANFVGLSGTFPCRWSFENGQFIHAASSSAGVAGFFVFKNKDELRDIPREGALVPWLQG KGTTFAPLYLEHVTEVGTLSAFEAIKKPSICRPFNEVVLNDETITKRGIDEQGKKIAADE INWYKHVTALGCTSIPKLYSYEPLVMERIRGRNIFEYDCLTVTEKKKIVKSIVKALDDLH HLEPEIDAVTADLDSNYITKTFDRLQKVENLVPFAKDEYIRINGRYYKNIFYDREALKNT LRQYYPRKFCLIHGDSTFSNMLYDRLHERLVLIDPRGYFGKTKFYGDKDYDWAKVYYSLA GNYDQFNQKKFALSIGDKSVELSIKPNNWADMEEFFFENLEDVNRTKIRALHAVIWLSLT TYAWEDYDSICGAFYNGILKSADFL >gi|319805896|gb|ADMF01000003.1| GENE 8 8596 - 8955 96 119 aa, chain + ## HITS:1 COG:no KEGG:Tlet_1187 NR:ns ## KEGG: Tlet_1187 # Name: not_defined # Def: hypothetical protein # Organism: T.lettingae # Pathway: not_defined # 1 119 5 123 123 112 47.0 5e-24 MSTLPKTWVLDVDGTIVVHNGHLRPVGDELLPGVKEFFASLPPQDVVVLLTARKKEIGPR LEAFLTDHHIRFDTILYGMPAGERILVNDCKPSGLPTAFAINKKRDEPLSIHVVRDETL >gi|319805896|gb|ADMF01000003.1| GENE 9 10190 - 10516 104 108 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRLGKLFYSHRIGSQNEHWRFLCLIVEKDLFHREISLVRFLGMPIFKYMPQRDILTYVF AVYELEKIPSNSSSTVCVYGNRWNCCRAFHGSSSSLTTKNLGFTSCRS >gi|319805896|gb|ADMF01000003.1| GENE 10 10615 - 11586 637 323 aa, chain + ## HITS:1 COG:yi52_g6 KEGG:ns NR:ns ## COG: yi52_g6 COG3039 # Protein_GI_number: 16129935 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Escherichia coli K12 # 3 315 16 328 338 265 43.0 8e-71 MEQLSFTDLEIEIRRKTRKTRLERLTQRLESLIPWKDLLDLIRPHYFVSGRRGRQPYALE LMLRIHLLQITYNLSDPQMEDCLHENFTVRKFVGLSMADRTPDETTILQFRHILEKHDLG PQIMQIVNAKINAAGLHLVKGRIVDASFIEAPTSTKNKTGTRDPEMTSGKKGNTWHFGMK MHVATDEIIGIAMDVVYGPANEHDITRAREVIADDTRVVYGDAGYVGITQRDEFQDLSRA DYMIARQPGCLKTMSQDSAEREMERFKASVRSKVEHVFKRVKLDMGYSKTRYRGIKKNAH RISTLLAVANLFCFDCWRRRSVA >gi|319805896|gb|ADMF01000003.1| GENE 11 12299 - 12787 56 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEEYARRNDLDAFSYDMWWTRSVGTHWSFGITFTKTMNKFISWIKFYANNDWQKDYKKY NVQYNVDWFFTFAKEKSILKCGTFYAEELILIHWGDFFRNNFASNISYFKDEHLHDLLHE RLFNSQSQTWKIPGSIPCIIKLNSLNDSVSYLRNVVGLVNKG >gi|319805896|gb|ADMF01000003.1| GENE 12 12798 - 12998 75 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIGKKTKYCISVFFYSFYLDIGKEQRQTKHMKYAFLLLEVNSILDNAKIEKFYIPPSRVR IFSIRN >gi|319805896|gb|ADMF01000003.1| GENE 13 13515 - 13841 125 108 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSKYDLLDVTQTKELSYQEAVELCSQSDLLLGLRSGFVELALFNGAPKAIVIYNNFRDT CVTKLTAKQALNGFTLKKMPICNSSNVTEVLFEDYDDPYSLFSLVANK >gi|319805896|gb|ADMF01000003.1| GENE 14 14306 - 14644 224 112 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIKIGLQGYRFLAGAKTCYKLVKTIIEDRNREFYEASAILESTNVYGIQDQMVLKGEAG KLDVNVSVFRNSVEEMDATAIIDRLMHHCTAIAINGDSYRLKEHKLKKLLNQ >gi|319805896|gb|ADMF01000003.1| GENE 15 14720 - 14941 163 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVGRRKNWKNQGFLKQRKPKMVRTEQLKYIQLLHERGEGSLKISKRLGLSRNTVRKYLA LLDIGQPILSTVR >gi|319805896|gb|ADMF01000003.1| GENE 16 15037 - 15681 498 214 aa, chain - ## HITS:1 COG:RSc1597 KEGG:ns NR:ns ## COG: RSc1597 COG4566 # Protein_GI_number: 17546316 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Ralstonia solanacearum # 14 200 15 202 210 119 35.0 3e-27 MTRTLKDIQQHTLVRIVDDNEDLRETCEMMLTYAGWQVRTYAGAWSFLMDDAPSVPGCLI LDISMPDMTGTELQMEMRRRRYSLPIIILTGHANVDLAVTTLKAGAAEFFEKPVDEDRLM KAIAKLCRESLAKSCGELTGRDLEKAFDLLTEREREILELMIQDVSSQQIAERLGLSDRT IYAHRNAIYRKLGTKNLSNISLEDLVSSSCSLPR >gi|319805896|gb|ADMF01000003.1| GENE 17 15678 - 17480 1147 600 aa, chain - ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 64 577 47 557 592 113 23.0 9e-25 MAFHISSCAAAAAALLCAFPGFSVCGAEDLRPVLRFGMMAFLQEGTPSGFTTYVNADDYV LRKLPQILSQSLPEYRVDVKVYRTAALIKAARSGKVDVIFGSSGCYASLLPDGIYPLATL VTNFAPDPNQAVAGAVVVSSRRTDLNSLKDLKHLSAMSGLESMFFNWQMPASALLDRGLD PYRFFSSLRQVDQPVPKILQALEDGTIDVGLMRACVLEGLPIERRNHFKVIEPAEDSPLA CAHTSRLFPNWTVGAMSQVPSDVAKRISLALLTAPPQTEAGIAWSTANSFKSIDQLYREL KWGRYEYLRHWTFTRVWEAVWPFALAALVAFLALMLHLRRVNALVERRTRELNDEAARRM ALEESNTALLQKFHRYEQMSTMGMLSNMVAHEIRQPLSALRYALRTIEMAAARDEEDSAV IEKSCAKARRQTERINDIVEHVCSYARTDRRNLPINLSELIRETVAEAAQMKLIHHAVTL VLPDNVFITGNPLELQLVVLNLLKNSSEAAAGRDPHSKIALTCGEDHVELIVSDETEQLD AEALERIASCGPSQKRDGLGLGLSIVRSIISAHGGSIHFSARADKGLEIHIILPLPGGSS >gi|319805896|gb|ADMF01000003.1| GENE 18 17568 - 19373 1821 601 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 90 591 1 475 484 173 31.0 9e-43 MRNFRLTAAAALLTALIAGPSWSYTPGTYEASAQGMKGPVKVAVTFSKDAVTSVKVIEEK ETAGIGTTAAAELPRQIVEAQSTKIDGLSGATVTSKAIFAAVEDCIRQAKGDPNQPARST APKHAGKTIEAAEDVVIIGSGFSGLAAAVNAAEHGARVTVLEKMSVTGGASAICGGQWAI MGTKLQKKKGVPYDPPQALVYDLIGNGHLKNDLTTLTMFAENSPRAADWAINRFKPKFID QKLQYRAEFQFDRSLYLKGGCGPAYRKVEKAVRDLGIKIHTDTKAERLIVKDGRIVGVEA HKKDGTKYIFSSKAVLLATGGYGANKAMLIEPLKSALYYGPASATGDGHRMAQAVGAKLE LMEFGKRYPNGVEAAPGVAKSIIQGNYRAWLQSGILVNNEGRRLINEKASNHDILTVLEK QKGGMLYLVMDQATWNGFRDGVHTLGITDEDLEKWLAENGRKAPIFAHGATLAEAAAAAG IDGRTLEKTVARYNELVKLGKDEDFGRPAAFMKAAISSEGPYYIVEQKPRFATTMGSVIV DENLQVLNQQGKPIPGLYAAGEIVNAVHGDDSSPGMNVAWGFTSGKVASESILKALGRLE K >gi|319805896|gb|ADMF01000003.1| GENE 19 19663 - 23616 4098 1317 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237745998|ref|ZP_04576478.1| ## NR: gi|237745998|ref|ZP_04576478.1| predicted protein [Oxalobacter formigenes HOxBLS] # 731 1266 934 1570 1631 124 25.0 4e-26 MNQKKLLAASVAAACLAMTTSALAADYSNHTGTADGTTLAGHLNSTTDAIISTNDTFENN KLTFNATNGQTTAAGIAAFHTSVTVKDGTFTSNEVSDSDGSINGVYGTAVGVTGADGSSA LTITNSTFTSNKGTSYNQTEGGAVYQSIGTATIKGSTFDQNVAETAKEPTKNNASAMGGA VSLWGTTTVIEDSTFTNNSTASHAEKGSSLGGALYLRSGVWGGAENLSASIKNSTFDGNS VKGTSAQGGALYAKSDYDSEKDKHYILNLDLDNVTFKNNTSDSWGGAMFVQGEGSLKMKD VTFEGNQGVNGSALAVYGNKPYESSLDKVTPVEVTATNVNYLNNVSKGKDAGAALWLYTK TQYNQTGGSFVGNKTTGSGGLLGAVFVKGAEAVFKDVLFQNNTVESSDGIAAGGAVYVDI VSNSTAGVVEGSVKFIASKDMIYSGNNVTGKDDPADTYGYMTATAGGFLLLDRGTSAEFA VDDGATLTIGEEGSTDHMDSIASAYPKAADQTAASIKKTGSGTLVINSDMNRYYGTVDVQ AGRMEVNTTWSLREAATISGGTLALKAFNFVKMPDPLSTVGSITVKSGGTLETASAQLFK NGLGDGSVTEAGDALKADKVTVEEGGTIALNDAVYNLDYASSLGNKYTNAKYVLLGQLSD ASKDDLAQQDKVTLDDVAMVGENIVLNEVKITSEDQNVQIGGTQLNDYAYREESLAVASF DLGTANQVLIDGGKTLTLTGEGAGSELLKTSGTDEVGVTVKANSTLLLGGTDYAKGGTLA GTVTVESNGTLTATGGETFTVDAIDGAGTVLVGEDKTAGKLTITQLAENFTGTIFVDPAW KDDETLNVIGNASHLEISKVDTAITGTLAAGRNSLITLGADAAEAASAFEAIASVQGLSW GEKNVTAALYLGAPIEVAGKIVVDGSLTDATSVAATYPNNATLYVANQGILIVSQSQGSS DTSMIAGTLSVADGSYIGVTNASEGSFKLADTITGTTEVVTDNPFIEGEISTADGTLTNT LNADSGLSALASLGIQSMARRADFTLSETIADRTAIDQQLHAGVNLWADVSGERYEADGL AHGAEFKADMGYAAFGGDIALGQDYTVGAAFQYGKGTLRSAVSSIRNEIDSYGFALYGAK DFGAAKVVAEASYLWTENDITASQTALNQSVDANVWSVGIRGQHAFKAGAFTFTPSVGVR YSHLETDAMTIGAVNVEKQKQDLIQVPLALRVTAGETNAAGWQLAPFFKVAYVPTFGDKE IEVLSHETDVIDTNPVQSAFGLRAQNGNLLLNADFTVGGGKDGTSSVGGKIGVKYAF >gi|319805896|gb|ADMF01000003.1| GENE 20 24073 - 24954 755 293 aa, chain - ## HITS:1 COG:aq_1309 KEGG:ns NR:ns ## COG: aq_1309 COG0083 # Protein_GI_number: 15606516 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Aquifex aeolicus # 3 290 2 295 297 172 34.0 8e-43 MQITVRAPASTSNLGPGFDIFGLALSLYSVFTFERAEALQISGCPEAFQNEDNLVLQGFR EVFREAGQTPFSVKLHIDAEVPVARGLGSSSTCIAAGAAAANAFLGSPFVKDELFQICAR FEGHPDNAAPVTFGGFTASFASDERFHALRMPLDQNWKFAVIIPDYEVRTADARRAMPKE IAVKDSVFTTSHAIAMIEALRSGSEELLAEACQDVLHEPCRRKLIKDYDSVRASAKAAGA PAFFISGSGSTMIALTKSETVAERFIELVRARHPNFASHVLHAASDGVRVETK >gi|319805896|gb|ADMF01000003.1| GENE 21 25042 - 26526 1615 494 aa, chain - ## HITS:1 COG:L0092 KEGG:ns NR:ns ## COG: L0092 COG0498 # Protein_GI_number: 15674085 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Lactococcus lactis # 3 477 5 479 496 402 46.0 1e-112 MRYHSTRSLVQQLTSREAVLQGLAADGGLFVTDELPELHIDPASLTGGYAGAARRVLGTL LSDFSAEEIAGAVEAAYGNTFADPAVTPVTKIGSMHLLELYHGPTAAFKDVALQMLPQLM SRALAGTGRRLVIATATSGDTGKAALEGFADVPGIGIAVFYPDGGVSAIQRLQMATQKGV NVEVAALRGNFDDAQSAVKALFASPLKAELAARNITLTSANSINIGRLAPQVVYYFDAYR QLAEAGVIRQGERIDFCVPTGNYGDVLAGWFAKTLGLPVRRLIVASNANHVLSDFLETGV YDRRRDLVRTSSPSMDILVSSNLERALYYLDDMDPVRTAARMAALKADGIYRIEPELLDK FRAVYGCGWLDDAETSDAVREAWETTGRLIDPHTAVAWKIAQEQASPEVPMVVLSTASPF KFCRDVFNALYGPLKLKSTTPEAAAFEYMDALADSTGVEPPQCLSALRTQSVRFNAVYDV DQAPERVLAAAAKL >gi|319805896|gb|ADMF01000003.1| GENE 22 27181 - 28389 1351 402 aa, chain + ## HITS:1 COG:BH3422 KEGG:ns NR:ns ## COG: BH3422 COG0460 # Protein_GI_number: 15615984 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Bacillus halodurans # 45 345 3 318 431 212 40.0 9e-55 MNPLNQTSFPRPPARLEMPSDPQAIGSDAFAIPDERHEDIGTEEDMLKIGLLGFGTVGRS IAEQLAERDCGIELRHILRRPGKAGGPLMTEHFAEIINDPEVDVVVDVLAGIEPSRTYIR EALLAGKAVVTANKAALAANYEELLGIAHAKGLPLLFEASCGGGIPWIENLKKAARIDRI ESMHGILNGTGNFILDRMDRFGMDFDEALKEAQALGYAEADPTADIGGFDVANKAVISAS VACGAPFKDDFPVLGIEKVTKSFLDDLKREGKTLRHMMLFKRTNNRAALGVAPVVLPLES LEAQVRSNFNCVTLEGDLVGRLSFYGQGAGGQPTADAVLQDLTSIRTRRVEPLPVAAPPV YDAGLLRGAGLTAHGILPDRTLEELARAARETGEFMTFQPEP >gi|319805896|gb|ADMF01000003.1| GENE 23 28410 - 29720 1553 436 aa, chain + ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 4 434 5 436 437 409 48.0 1e-114 MLKITKFGGSSCASAEQFRKVKAIIEADPSRRFVVISAAGRKTPKDNKLTDLLYLCRAHI EYHVDCQPVFDLIKGRLLEIKNELGLDTPIEEELSRFREALPDLTIDDIASRGEYFTSRL MADFLGFPFVDAKDVVAMEFDGTFNFEKTTENLKGVLQKNSRFVMPGFYGTTPDGKIKVM TRGGSDISGSILARCLKADLYENWTDVSGFLMADPRIVPNPKNIEKITYAELRELSYMGA SVLHEDAIFPIREYNIPIHVLNTNRPQDPGTLVLDKISDRDTGPLVTGIAGKKGFLSIEI VKRNMSTMVGIVSGALDVLNKYGVSIEHLPSGIDSFNVVVNKKDVEHNLYEILSEIKQAI APDSIRVPEPIALIAVVGRNMNARVGSSAKLFGALAEANVNIRMISQGSSEIDIIVGVSQ QDFSKAVQALYNTFTK >gi|319805896|gb|ADMF01000003.1| GENE 24 29852 - 30892 1391 346 aa, chain + ## HITS:1 COG:aq_1866 KEGG:ns NR:ns ## COG: aq_1866 COG0136 # Protein_GI_number: 15606903 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Aquifex aeolicus # 8 338 4 334 340 329 52.0 5e-90 MTDPKALKVGILGATGAVGEQMMIVLAERNFPVAELRLFGSSRSAGSKLAFKGKEYEVEE ASLERMKGLDLLLGAADNDVAKKFLPDAAKLGVTVVDNSSAFRLDPEVPLVIPEVNPEDV KWSKGLIANPNCATIIGLTAIAPLHRKAKVKRLIASTYQAVSGAGKGGIDELEAEVKAPA GTPAPCKVFPYPIAYNLIPQIGGFNDEAYTSEEMKMQNEGRKMLHDDNLLVSCTCVRVPI IRSHSEALTIEFENEISPEEARELLKDAPGVRLWDEPEEKHYPMPLLTSDQDLVYVGRIR RDLSAPKESYNRSLVLFCCADQVRKGAATNAVQIAELVFGLAQSAF >gi|319805896|gb|ADMF01000003.1| GENE 25 31000 - 32247 1287 415 aa, chain - ## HITS:1 COG:SMb21538 KEGG:ns NR:ns ## COG: SMb21538 COG1524 # Protein_GI_number: 16264726 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Sinorhizobium meliloti # 4 411 9 412 424 334 44.0 2e-91 MSLLAINHIHYRRPLRPCVAVCIDGSDPSYLARYLSRGELPNIARFIREGFAGTAQSSVP AFTCPNNMSIITGVPVSQHGISGNYYLDTKTWEPVVMTDPKLLMAQTILSGFADAGARVV SITAKDKLRRQLQKDLDLTRGNISFSAEYADQCTIEENGIDNVLTYVGEPQPGKYSEALS LFVLQAGLKLLRDRRPEVMYLSLTDFVQHRYAPEAPEALSFYQKLDALFGLLAAEDINLG LTADHGMSDMSLENLEPHVLWLQDILDAKFGKGEAVVICPITDAFVAHHGALGGLVRVWS KGSVSTAELIETISALPEVDIAVDKERAVRMFELYPDREADVVVLAKEHVCIGTSRSKHD LKGLSGHRLRSHGSLHEMEVPFILNRPLNDAYKERAAAEALRNRHIFDYLINGTN >gi|319805896|gb|ADMF01000003.1| GENE 26 32282 - 33871 741 529 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 20 521 27 522 563 290 34 4e-77 MTANVLDISHLTLSIEHKTILQDIDLTIGAGETVALIGESGSGKSTLAQCILGLQPQRSR LAPESRIDFLGEPLPIENDARMRRWRGCSISMIFQDPMSCLNPYLRVGTQILEALKRGSA SDEDPHARVLELLEMVDLPEPKQTAGKYPYELSGGQQQRIMIAMALANRPQLLIADEPTS SLDACVQAEILKLLERLQKAFSLSMLFITHNMAAARFLAHRVYVLQHGRIAESGDIAAVF AHPREAYTAELIRAKENLAALEPVACEAQNNASPVGELSNVSYAYPAAGFCRRAQPTLKD ISLRIYPGETLGILGESGSGKSTIAKLLAGLVQPSQGKVSLFEEDISRTRKMALALRKRC QIVFQNPFGALNPRLTVEAALREPLELMNLESHAEERIREALQSVSLPEDFLARYPHELS GGQRQRVCIARGILSHPDLLICDEIVSALDPTVQVQVLLTLHRLQQERRFAMFFISHDLD VVEHISTKIAVVYRGSIVEYGPAEAVMNSPKHPYTQKLIEANRMASTRA >gi|319805896|gb|ADMF01000003.1| GENE 27 33868 - 34779 1020 303 aa, chain - ## HITS:1 COG:BH1797 KEGG:ns NR:ns ## COG: BH1797 COG0601 # Protein_GI_number: 15614360 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 19 303 17 308 315 150 33.0 2e-36 MHKLWLLASTAGKGLLQCVLIVALTFLFCRTIPGDAVDVLGLEGGLTAEQAAAIRQALKL DDPWLVQFGDWLSAASHGDLGQSLRFGRSVSDMLLNAIPVTLQLAGWAFVLGLFLALGLS LWAAARQSAFADSLVEGLNAWSIAMPTFCAGVIFILLFCIELHWLPVIGSFVLPAVIMGL DSGGTIVKPLREELKESAALPYVRTAKAKGLAPLRIAVFHILPNAAGILLSLSGLVAGSL VAGTLTMEILFGLPGIGSLALNAIQGRDTPVVLAAVSFIAVSLVLINTAVDALHKLFDPR MTL >gi|319805896|gb|ADMF01000003.1| GENE 28 34797 - 35654 533 285 aa, chain - ## HITS:1 COG:BH0030 KEGG:ns NR:ns ## COG: BH0030 COG1173 # Protein_GI_number: 15612593 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 4 278 15 297 301 139 31.0 9e-33 MLKASPSGADKIQSFPDLRQILLYAALGGIVLAALFAPWLTDVSPLDQDLMNLDQPFSPA HPLGTDSLGRDILARLVYGARTTLEISLGGTFIAFFIGAGIGLTALSMGRFAAGVFFAFI DLVRALPSTLMALLVIVGLGSGQWQLMAATGIAFSPLVAYVARSVYQREASREYVLAARS FGGSRMHILKLHLLPNIMGALITQLGIVLPRCIVTESVLSFLGLGSSPDEPTWGRMIADA APMMERAPHEVIVPLCALVLLTFSLSLLANEWRERLDPIRRLERC >gi|319805896|gb|ADMF01000003.1| GENE 29 35669 - 37195 1865 508 aa, chain - ## HITS:1 COG:Cgl2268 KEGG:ns NR:ns ## COG: Cgl2268 COG0747 # Protein_GI_number: 19553518 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 62 485 71 479 503 137 27.0 5e-32 MGNAFSLHRRTLLLASLAAAALPSFPADAAVRRELRYATLGLDTSDPHRHTGSIAVQQCY AEPLTSIADDGQVKPFLAEKVTVSSDGRTYTLKIRQGVKFHNGDVLTAEDVVANINRIRE KIKGGWLVSSLKNVESLSVPEPGTVVIAFARPFAPFMSLMAELWILSPKSPGWDSTITQP IGTGPFRFGKWLPKVSLDAPAFADYWQKGLPKLAAVHFDLRDGTDKSLAIRSGDLDVAYV SKDAAEDLQRAGAAVIEGLKDSAWYFLSFNNRKPRKPFDDIRVRKALAHCIDKPGFMNFV GGSRAQTSNQFVGANNFYFDRALYEADEFKKPDLEKAKALLKEAGVDPSKHTIEFVSWQV PYAQIAVQMIRRLGFKVHHVALDDIGTQKRLSQYDWDLTVMSSGPRSDIYLRYVRLMSEG PNPVLWGGIQDPTLDKLIAEAAETTDAQARRTAYLKAFKRVMEKGYFYVIGLTPDLIAIR KGVTGFHTGFTWACHWADGGVDHADLKA >gi|319805896|gb|ADMF01000003.1| GENE 30 37198 - 38484 633 428 aa, chain - ## HITS:1 COG:no KEGG:BB1009 NR:ns ## KEGG: BB1009 # Name: not_defined # Def: hypothetical protein # Organism: B.bronchiseptica # Pathway: not_defined # 5 425 4 429 435 259 41.0 2e-67 MSVDKLAVIVITDGLRRDSIEAQSTPALDVLRGESVWLRRHRSAAPSVTRVCSATIATGC YSLRHELAGNKLCLLDHGKLRLLDVGVPSFFSLCRELRGHVLGVPTLAQRTEAAGGLRMY GNASPGAAYVQDPTHRGHVFHRAGSFGPRGQLPQSEALNVSSDLAGDRAMTERFIDDLEN QLAAVNLLWLGHPDTTQHHCPLGSPEHLEALRRTDENVSAVYACVDELRRKGKDVLFIAG SDHGHETVSGLVDIDKQLAEAGFESELASGRLVTAPNGTAALVYLQAPEAVRARLEAFFR QADWLSDVVCRRQFELYGISQAPALEFFLSLKSDPAALNPYGVAGESLACLVPGSPYPIG CGQHGGLGLHEQSPYCLVNHPGLRPSEISAATDLTLIAPTVLRFLGLSLDGLDGRSLQQI LGVPTLGD >gi|319805896|gb|ADMF01000003.1| GENE 31 38598 - 39269 655 223 aa, chain + ## HITS:1 COG:BMEII0281 KEGG:ns NR:ns ## COG: BMEII0281 COG1802 # Protein_GI_number: 17988626 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 27 219 34 225 238 101 37.0 9e-22 MPENTQIALLTSKSLPELICSELEGWIAQGKVSPGQPLREADISAQMGLSRGPVREAFRI LEERGLVCCEKNRGVRVGNLTLEQVKEIYELRETLEGLIGRLAAERAGAAEKAALKGIVE EMAKAVDAEDVARYTELNFKIHEMLAGCTQNAVLKEIYLRLVSRLHLFRSYVLRHQTGSA KRSYLEHQAIAEAVCAGEADEAEKRLKAHTRESLQHLIAIAEK >gi|319805896|gb|ADMF01000003.1| GENE 32 39366 - 40025 816 219 aa, chain - ## HITS:1 COG:RSc0073 KEGG:ns NR:ns ## COG: RSc0073 COG1280 # Protein_GI_number: 17544792 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Ralstonia solanacearum # 2 215 4 211 215 112 37.0 4e-25 MFSLTNYLLFLPAVLVITLLPGPDFAIVVKTALLSGRRQALACALGINCGVAVHTIAAIL GISAVIAGSAELFAVLKWAGAAYLFYLGLRSLLASRRHESHEDGAPIEAAAAALQNAEAE TPAAAFRSGLFCNLLNPKVVLFVLTFFPQFMDAALPAGPQLALMGVTWAFLGLAWLAVLV VMMDRIRPVFGRPAFQRWLNRTMSVILILFGLRLAAARS >gi|319805896|gb|ADMF01000003.1| GENE 33 40442 - 42013 1812 523 aa, chain + ## HITS:1 COG:RSc1380 KEGG:ns NR:ns ## COG: RSc1380 COG0747 # Protein_GI_number: 17546099 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 22 515 18 510 517 462 50.0 1e-130 MNRLSSAFAESRLVGSIAAVMLAAAASGTHAAPLETLTIAVNTGFTTMDPWDATDNLSRT AARSFYESLYTFDKNLKPTPQLAESVDISPDGRIYTFKLRQGVKFHDGTILDAEAVKLSF ELGASQDLKRTRRNFFNFVEKIEAADQYTVRFTLKSPMTAFLERLSNGTAAIACPSLLAR AKTKQALAFEACGTGPYKLVRFNPAEELLVERNPDYRVPGLPKFKALRWVPVVENSTRAA MLQTGEAQFIQMAPVEQIPVLKANPNLAVNVVPSVVMRYMSMNMNEKPFDNPKVRQAVNY AINKQALCKVAFSGYARPADGVIPEQIPNAVKLGPWPYDPKKARELLKEAGYPNGFKTTL WSAFNNTTAVKTMQFVQQQLAQVGIKAEARALEAGQRVQVYGNKDPKKAPNRLYIIGWSN STVDPDWGMRPALYSKNQPPVLNNEAYYQNPKVDALLDQALADTDPAKRAAEYKELQEMV WQDAPWAFLVFEDVTSAANKHLKNFNTLADGSFEFYSAEWQED >gi|319805896|gb|ADMF01000003.1| GENE 34 42142 - 43125 688 327 aa, chain - ## HITS:1 COG:RSc1092 KEGG:ns NR:ns ## COG: RSc1092 COG0583 # Protein_GI_number: 17545811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 7 301 2 291 300 94 28.0 3e-19 MPEFTNDLTHDDLALLLLLAEKRSLTRSAMTLAWSTPKASHRLNHARALIGDELFVRSGN SLVPTKRMEALVPTMRRALEALEGIFAEERFSPLEIDRTIIFEMVDNAAAVLLAPALPAL TERAPKLKIRIRPAAGLTLENLWDGTTNLAFGFDIDRELPGDIQSATLFKSRHVAVMRRG HPLLNHPSVKAGIPVGAKVLAPYPYISISMPQWRSLRNIDLAWRAENPSPVRIETPYFLS MPYLLAQSDAYALLPREGAELLSSHLPLAILETDPADIRGWNPQIIWHRRNNADFALQWV RSEICLWFKKHPPMNPEMMLEDENRHR >gi|319805896|gb|ADMF01000003.1| GENE 35 43271 - 44461 1379 396 aa, chain - ## HITS:1 COG:RSp0955 KEGG:ns NR:ns ## COG: RSp0955 COG3203 # Protein_GI_number: 17549176 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 8 196 5 199 368 60 30.0 5e-09 MKTQALRLTRLAAAAAFAAAFSVQAADFSVYGIVDTGIIVEHNKMGSQPSSTSAREEFGV NLGPRIGLTGTEDLGNGTKVKMLLENLFESDDGEMLFSRLWGGEASLALEGSMGEIAVGR MGALVSPFGHWGIFGMQATPFGFGWGRSGGMHWMVGGDRLDNTISYATPTIAGGLQLFAQ YSFQTGTNADPGVEESKERHNTRRASAAFRWQGQSLTAVGVLDRIMNTHKDGADYGEDTT IASLTVNFLVHPDVRLFVVGQGFKNVYSAPGTPEHPVSKLISAGNLAPDNQSGIAGRGFD GWVASLNAQIKCFGGDLYLTSAYDDWEYKGHVVDGQTTDLKRVLFGAAFEYPLSKHTHLY ASANWTHGSGLFDTKNFSDSSDPNSSQVMAGLTYFF >gi|319805896|gb|ADMF01000003.1| GENE 36 44638 - 46461 2589 607 aa, chain - ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 3 602 4 608 611 739 58.0 0 MLLTKRQFLTSVLALSVSAAARAAGGPSGPAVHFQSQGKIGEVFVNPYKIAPLTAVIGNG GYELRNASVRIVPKPNGQEIAYSVADRLCRTHGGIPVFGLYPDYQNTVEVEYDRVANDAA RTVEHIRESYKIYAGPAYIGSDGTDQQTGGWFRAEVLKCAPKYKDRLYLVNNILENNPRG GRAVWNNPAGGALQWGGSPEVGIIDSTGALRWYLMPDSIFEPNSIEWGGVMMGFRQNKDG ALTWGYGQRYVKYDILGRRIWNRLLPEGYDDFSHALEPMENGHYLIRVSDANYRRADGRN VRTVRDVIIEVNEAGEVVDDWNLNNILDPYRSTVIKTLDQGAVCLNIDVDKAGKTMTAEE LAKLDASDDFGDILGTGPGRNWAHVNSVDYDPTDDSIIVSSRHQSAIIKIGRDKKVKWII GSHEGWKKPFADKLLTPVDASGKPIACDKFMNHCENKFDWTWTQHTAWRINEKSKKGDVY LTVFDNGDGRGMEQPALADMKYTRLVVYRVNESKMTIEQIWTYGEEKGHDYYSPVTGLCE YAGDKDSVVGYFSTAGMRVSKGKAMPSPYLTEFDWGAKEPSVVMHLKDTFGYQAWPFSIQ EAMKPSK >gi|319805896|gb|ADMF01000003.1| GENE 37 46784 - 47926 1694 380 aa, chain - ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 118 1 123 389 82 40.0 1e-15 MRKTLVAVAAALAFGSLSAHAGDVQMYGVIDVGFSYVHSDADQPGVDSVDKFTMENASEF GSRWGIRGTEDLGNGYKVGFVLESGFKSDDGTLDQGGRLFGREAHIDLYSPYGTLSAGVL PVFGSVLGANGLFRAIDPLFANYTVGFSSGFASASKWTRVNNAVSYVTPTFAGVTGYAMY SFQTDVVGSDSKQVEGKSSADRYASLALRYQNASLEGILVADTTLYGSERQNKHSDDGFT ITVGGNYKFDSGLKFVTFYQYFQDQELNTAQRGGVAADGINSFTNNQGYGFVDGWGASFG VHYPVAGGTLKGQISYRDMDNQNDVDFTRWTVAAGYDYSLSKRTAVYAMAGYSQEKLEKT GVESATPNGYQIVFGTVHRF >gi|319805896|gb|ADMF01000003.1| GENE 38 48266 - 49798 2254 510 aa, chain - ## HITS:1 COG:lin0374 KEGG:ns NR:ns ## COG: lin0374 COG1053 # Protein_GI_number: 16799451 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Listeria innocua # 27 507 47 502 506 206 33.0 1e-52 MTDISRRKLFGAAGAASLGLAGMVPVASASECGKPVKWNETKEFVIIGTGFAGLAAALEA HQGGMKSDQILILEKMSFPGGNSVINGGAVAAAGTDMQKAEGIKDSPDLLYADIIKAGGG LAHPELARHIADESVENFYWLRDKIGVKFKAVTYHGGHSVKRSHAVESNSGAGFILPMLE RLKEVGIKPQLRTKVEQLIVNDKGCVEGVKARTGYTFGKEESGKVVYIRATKGVLLATGG FSQNVKMRMSHDPRLTAAFTSTNQPGATGETIQQAQEIGANTIQMDWIQLGPWTSPDEQG FGVAPLFVESAVGYGPMIDPATGKRFVKETGNRKVRADAIVAIGHPCLIYTSAVNAKANI IGKNMTDELYKHARESGVVKEYPTLKAMADDLKIPFDQLKKTNDDFNSYMKAKKDPEFDC MIFDNAVPNEEGPLLAVRLWPRVHHCMGGLEINNKAEVLSCRGEPIKGLYAAGEVTGGVH GMVRLGTVAVADCMIFGRTAARTALAFKGC >gi|319805896|gb|ADMF01000003.1| GENE 39 50190 - 51107 1127 305 aa, chain + ## HITS:1 COG:L181807 KEGG:ns NR:ns ## COG: L181807 COG0679 # Protein_GI_number: 15673902 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Lactococcus lactis # 65 305 1 238 238 103 31.0 5e-22 MESVLVKVVSFIAVIVVGYLLKRVGFFRAEDFRLIAGLVLKVTLPCAIISNFTRIDVDAA LFVLVLLGLGCNLVTVAAGWLASKRGDSAEQAFNIINFSGYNVGCFALPFLQSFVSPMGV VAACIWDTGNSIMCTGATYSIAAAVAGKNEGGGARLFFRRMFSSVPMDVYVAMTILAFLG WKLPPQVLGFTDMVGAANPFLAMLMIGIGFELKLAPGSGLHIAKTLFCRYLIAAALAFLF YNYLPFDQEVRKVLAILAFAPLSAVCTIYTALCLNDPGRVALSCTLNSLSIVCSVTFMTV LVVWL >gi|319805896|gb|ADMF01000003.1| GENE 40 51457 - 52134 128 225 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKLKELFTAFSGGLVAVVYLVYALAMYCIAGIAVSDITGWDWLGYIAAPIFIFLRMTFL PAGLAAWALYDVYHFNPFLAILIALPGLAWMLIGGAGLAIAGLLERLKKNNRIDHHNQIY VDTSSEKEAFNDNCSKAEMKSNDEVPDSSDKSTLEQSEIHPDIVTCPLENIENNVDTGEA IPTDESRSIYGDIKSTGVERALTLILLMCVLSFVIFCGFNLIRYL >gi|319805896|gb|ADMF01000003.1| GENE 41 52135 - 52491 177 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTFKQVFIDLYCDPLTRKQFIIRFVLTFILSLLLNVVIDTLDKIAYRLSGQLDLYFISL ILAASLVLLIYTIGIFSRRLADLNESKWHCLWCLIPLVNIFFLIYLFSVPGALSKAEK >gi|319805896|gb|ADMF01000003.1| GENE 42 53570 - 53851 278 93 aa, chain - ## HITS:1 COG:no KEGG:Arch_0466 NR:ns ## KEGG: Arch_0466 # Name: not_defined # Def: addiction module antitoxin, RelB/DinJ family # Organism: A.haemolyticum # Pathway: not_defined # 4 86 3 85 86 84 46.0 1e-15 MDATATVSFRMDAKLKKKFESIIQMMGLNMTTAFTVFAIPVVNEGRIPFAIKADPFWCAE NQARLRESIAQLELGKVNEHDLIEGGSRTIARN >gi|319805896|gb|ADMF01000003.1| GENE 43 54060 - 54329 68 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRINHCICSCGKAFIRAWSIGRCLKVIRRFFSHRLGGLGMCRHNENLCGPPEPEAGLGK FRNELELSACALVPRHAVYAVVGCLAGRC >gi|319805896|gb|ADMF01000003.1| GENE 44 54198 - 55685 1660 495 aa, chain + ## HITS:1 COG:RSc2451 KEGG:ns NR:ns ## COG: RSc2451 COG3264 # Protein_GI_number: 17547170 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Ralstonia solanacearum # 151 474 112 430 447 205 42.0 2e-52 MTTHTEAAEAMAEEAADHLQAAANAPSPDEGLSAAADAVIDTTHWFTRFFETLTAGMTWS SLLLQIFAVICAFILGWWGSRAFTEWLEKRRPSADDLGVVNHIKHLAYGLLENVSFGLIA GSSLALAAWLIVTLGDEPSRSLVICRIFYSIFYAFSVLSVVMAFVQASIGRSIITRGVQR AVTVIFWCFAVLQFFGVLSDLVDYLDALRIPIGKGDMTVWKAFMAVISVLLTLAVANWIS AIINQFIQGAQNLTPNLKVVLSRIVTVLFLILAVIIGLGTVGIDLTILSVFGGALGVGLG FGLQKIASNYVSGFIILLDKSIKIGDLVTVGGFRGKVVEINTRFTVVRSLDGIENIVPNE AFVTSAVLNHSYTDEANTQYVAVTIDFNADVDRALAVMLEEVSRDRPRIVKGRKPWAYVD SFGDSGINLKAAFWLADPVNGSVGIKTAITLDIVRRFREEGIRIPYNRLEVVMLDSHADD DAPADVQPKGSSAAV >gi|319805896|gb|ADMF01000003.1| GENE 45 55834 - 57405 1761 523 aa, chain - ## HITS:1 COG:SA0645 KEGG:ns NR:ns ## COG: SA0645 COG0471 # Protein_GI_number: 15926367 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Staphylococcus aureus N315 # 46 523 25 517 517 371 46.0 1e-102 MNTTHSVALVDSASNMTSRGSASAGSNGKSTVTADTQPSPGFFKRYGLVFAVAALGIICL MPQLADLSIAGQRMIGIMAFAVITWATGAVSFPVSAGVIMALIAVLVGLSPQPDGQGLIG TSKALRMALTGFSSPAFCLVGAALFLAAAMMQTGLDRRIALVTLSKIGTSPSRVVLGIIL CGFILSFFVPSTTARVACLVPIVTGMVRAFGLPLKSAFGAMLLITVAQVDSVWNVGIKTA AAQNMVAVGFIQELTGHDISWLDWFVAAAPFAALMSVVLYVVVTRLFKGSLEDISGGDDA VRRELAKLGPMSAAEWKLTVVSLVLLFMWVTEKKLHPFDTTTTTVCAIALLMLPSMGVMD WKSVVNRINWGTLLVFGVGISLGSTLLSTHAAQWLAEGIGSSFGLADQTTFVVVAVLALF LIIIHLGFASAAALSSALIPIIIALVNGLDAPNVNVLGITMILQYVISFGFILPVNAPQN LIAYSTGAFDVKTFAFTGIILTIAAYLLILLMSATYWSWMGLV >gi|319805896|gb|ADMF01000003.1| GENE 46 57946 - 59052 1009 368 aa, chain - ## HITS:1 COG:SA0507 KEGG:ns NR:ns ## COG: SA0507 COG1473 # Protein_GI_number: 15926227 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Staphylococcus aureus N315 # 4 367 14 385 391 211 33.0 2e-54 MFERILKYRRDLHQIPELDFDLPKTTAYVRSVLEKLPCEVFSPDGHAVCAWFDAGAHEAV AFRSDMDALPICEVSGVPFSSRHQGHMHACGHDGHMAMVLELAQYVASVKDRLKQNVLLV FQPAEETTGGAQFICQSGIFAQKNVKAIYGFHLWPDLPLGQPATRPGPLLAASCEVTVDI EGKSTHIAKSEDGADALLAASRFVVGAEKILDDLHAAEGPWCTLKFGLLQAGTVRNAIAA HAHLEGSLRVFSESVFKMGRDRLYALGEQISKDLGVKVHVDAPEGYPPVVNDEKLFEDAQ KRLPNLEMLPKPLLIAEDFAYYQRTLPGLFILLGTGTGIPLHSDRFNFDEKVLEKGVEIY KHFIDLKD >gi|319805896|gb|ADMF01000003.1| GENE 47 59434 - 60141 1017 235 aa, chain - ## HITS:1 COG:BS_ykuQ KEGG:ns NR:ns ## COG: BS_ykuQ COG2171 # Protein_GI_number: 16078482 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Bacillus subtilis # 1 235 3 236 236 239 62.0 3e-63 MMNAQEIIHYIATAEKKTPVKITLREKAGEAPISFGSAKVFGVGDKVIFGDWKELGPILE ANRSKIDDMVIENDCRNSAIPLLDLKGINARIEPGAVIRDQVTIGDGAVVMMGAIINIGA VIGEGTMIDMGVVMGGRATVGRRCHIGAGTVLAGVVEPASAQPVIIDDNVFIGANAVVIE GIHVGEGAVVAAGSVVIEDVPAGAVVAGVPARIIKAHKDAGTSTKTALESALRQL >gi|319805896|gb|ADMF01000003.1| GENE 48 60183 - 60896 762 237 aa, chain - ## HITS:1 COG:RC0190 KEGG:ns NR:ns ## COG: RC0190 COG0289 # Protein_GI_number: 15892113 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Rickettsia conorii # 1 232 48 282 285 158 38.0 7e-39 MRIALIGMGRMGRMIRDCAADRGIEVAAEFNTATIAQLAQCDRMDAVIDFSAPASLPALA AYVQRTGTPLVSGTTGYCDEEAARVNALGSYAPVALSANFSIGVAVLKHLAAEAAALLPD FDIEIIETHHRMKKDAPSGTAKLLLSAVNPDGTHPTVFGREGFTPRTAGEIGVHAVRGGT VAGVHTVSFFGDEEELSLTHRAESRRIFAIGALKTAEKLKDAPVGLHTLDELLFARR >gi|319805896|gb|ADMF01000003.1| GENE 49 60910 - 61800 1096 296 aa, chain - ## HITS:1 COG:CAC2378 KEGG:ns NR:ns ## COG: CAC2378 COG0329 # Protein_GI_number: 15895644 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Clostridium acetobutylicum # 7 296 5 293 293 299 53.0 4e-81 MSHPTIRGSLVALITPFNEDGSVNFDKLGELIDFHLANSTDALVILGTTGESSTMSHEED NAVCEYTVKRVAGRIPVIAGSGSNSTQTMLEKSLSYERLGADGLLLITPYYNKTNEEGMY LHFKTVADAVKIPCILYNVPGRTGCSISVANVARLSQHPNIVGIKEASGNMSYAAKVAKY LSDDFAMYSGNDDMIVPLLSIGASGVISVLANIAPKETHQMVFDYLEGRTDDARRAQIEL LDVINDLFIEVNPVPVKEAMNLLGMDVGGYRLPLTHMTEAHRETLRSSLAAAGFLK >gi|319805896|gb|ADMF01000003.1| GENE 50 62461 - 63153 701 230 aa, chain - ## HITS:1 COG:sll1900 KEGG:ns NR:ns ## COG: sll1900 COG0110 # Protein_GI_number: 16330771 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Synechocystis # 15 219 4 206 209 220 51.0 1e-57 MSTFSIMGPHNTDLPDPFDIFPIDDTAVCFIKNVVTTPNVEVGEYTYYEDDENPTEFDRK NVLYNRPEFGDKLIIGKFCAIGANTKFIMGAANHSVSTVSTYPFSLFGGKWAKAARSTYD LTPHKGNTIIGNDVWIGRRSVIMPGVKIGDGAIIAASAVVTKDVPPYTVVGGNPAEFIRR RFNDRLTAMLLELKWWDFKPDDLIKVLPVLTDPDLEKVEREVEALLKSRR >gi|319805896|gb|ADMF01000003.1| GENE 51 63742 - 66444 1666 900 aa, chain - ## HITS:1 COG:no KEGG:JJD26997_1041 NR:ns ## KEGG: JJD26997_1041 # Name: not_defined # Def: autotransporter beta-domain-containing protein # Organism: C.jejuni_doylei # Pathway: not_defined # 157 898 405 1082 1084 120 25.0 4e-25 MLLPESHSSDYSVALPSLAKLTLCAAAIQAACFSFPALAADNPVVEKTAYSDIISPDPSN PSNWVVNRGTDDPAKGPASISWRHGAATSTLTISASSGQTVKILGGEPLAAVLYYRANGA NFTNKKTGELFQATKRNGFGFLAREGKMGSFINNCTIEGGFTGVRFDQTAITTIVNNGTI IGSIKGGNADRTWRSAGMEIMAQNIGSLENSGRIQGNTGLYLEDVWMKEIVNKSGGVIAG TGALSYDKVWNNKPGAANASPGAGISFGYNKVETIRLESGSKTTSQNAAGLFVGTQGNLS TLELQQDAELSGNWGVEVYQGKITTAKIDGLLKSTGGSAFYNHGTVQDLKITDNATIEST VGISNTGKFSTIDIANAATLNVDSAVVANSGVIGTADDQVALHIGADATQAKEALNNTGA ITGAVAVENGGTLTNTATGIISGPIIAGSGTNTGASNLLAVDNRGKVNTSGQAADIHIEN GGQVKVLNWGVGVTGNRVGDGQGIKVSGDNLNARSINVEKVQISSITGYQSGDIDFNNAV QNASGQALSGVTGKPTQDVEFDETLKQQYGLDGYYDQGSGYFTLWVNAVKGVGAQLAETL ANRLNRRAMFVEAATADVSQTGYTHRMQDNQEWLTFVKPYTSYDKFDLSAGGTVKGHTTG ILLGISNMYRNEHLFTLYLGYETTDDSADSLDFDMNTVYGGAKFARVFCTAGNAAYYGKA EAMLAHTSTDVTRSIGGQQFTGSADTFSYGGAVHIGMNYSLGKSSVFTPEIGVGYTGGRM GDFDINGNIAAVSYEHYDSHTSNIGYGDLSLKWFQKWGTIVNTLLGGGTRVNFNRDMDVS SNISGVQGSSTVKLPRSYQWVNASLILDVNSNLDLSFGYVGILDTNGSSHNMTAKLTYTF >gi|319805896|gb|ADMF01000003.1| GENE 52 67820 - 69019 1557 399 aa, chain - ## HITS:1 COG:SP0176_1 KEGG:ns NR:ns ## COG: SP0176_1 COG0108 # Protein_GI_number: 15900113 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 3 204 2 203 203 289 68.0 7e-78 MAQFNTVQEALEDLKNGKIILVTDDPDRENEGDFICAAEFATPENVNFMATHGKGLICMP MSAEYAKKLDLHQMVENNTDNHSTAFTVSIDHIDTTTGISAYERSVTAMKCVADDARPED FRRPGHMFPLLAKKNGVLERNGHTEATVDLCRLAGLKEVGLCCEIMRDDGTMMRTPELIE LAKQYNLKFITIKDLQAYRKIYEKLVDRVAVVKMPTKYGEFRAYGYVNRLNGEHHVALVK GEIGDGKDLLVRVHSECLTGDCFGSLRCDCGQQFAAAMTQIEKEGRGILLYMRQEGRGIG LINKLRAYELQEKGLDTLEANLALGFKGDEREYFTGAQILRDLGVKSMRLLTNNPDKVYQ LEEFGIVITERVPIQMDATAYDLFYLKTKADRMGHLFKY >gi|319805896|gb|ADMF01000003.1| GENE 53 69392 - 70579 801 395 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQLTIPHTIVLISRPVPQAEPAPEINAQTLAAEFFGNIQRKIVRLEGDLGLRLLKILDFK GEDAIHKRFRFAAASSENPGLRRRAAFAGSLTPAIWASLAQDIDYRTRFAVLHDPCTVKV LSNWSLAAAVKGDITAAQMLLKSLSANGCEPRHMEKLMTEVDLSGNKTFRLQLKRLLSKG LWGSSSFTLDDDVERDLALEAAFAQASNALTAGKDPHPIKTKGEAANQKNETNETNETKE RLLSPIAFGLIDRMAFLTSFFQNGELTETLQKMLLDAAVLPLTCSEIAALIRVLPKDTHF DPILNSAAELQDPEINIALSERPRLPRLALKFLRDDWSYAVRRNRLANPQMLRNVEPIDI KRQLDQDPTLIDDAAEFEIEAVVSAAPHLVSRSFF >gi|319805896|gb|ADMF01000003.1| GENE 54 70873 - 72411 1488 512 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 43 506 42 477 484 180 32.0 7e-45 MSNLSRRKWLKTAALTTTLFAGASSASAKAFDPMPEKWDETFDVVVIGSGFAGLAAAIEA RLAGASVCVLEKMRVIGGNSIINGGIMGVPGTPMQKKEGLEDSPELMAKDMMTEGGGLNQ PEKVRHLCEEALPTWEWTIQTLGVEWVEERVAQEGGHSVPRCAIVKNGSGSGIVLKEAAK LEALGVKPRTRTYLERIIRDADGRVKGVQVREGYSFPKADSGKVKFIAARRAVVLCHGGF GADIKYRSIQDPKLTEKLGTTCQPGATSEAWREAARIGCQLIQTDWIQCAPWTSPVEKGM GIALFFAQGAAAMFGVWVQDKTGERFVDELANRKVRADAIMTLLNEGIHCYAVADAKGVE PMGISRPGLLQKMLERGCVKQYETLEALAAGEKINIEGLRKSVEEWNSAVKSGTDAHFKR YVNKKAPPMGTGPWYVSTMVPKVHHCMGGIYTDMQARALDISTDEPIPGLFAAGEATGGV HGAVRLGSCAVTDCLVYGRIAGRTAAQNESWM >gi|319805896|gb|ADMF01000003.1| GENE 55 72635 - 74131 1910 498 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 22 498 34 484 484 140 29.0 6e-33 MKQFAITAAAAAAVMMMNPAFAADAAYEADLCVIGAGASGTAAAWAAAEKGMKVITLEKS GLPGGTGKYSEGIFAVESAMQRNWNYGLTKDEAFMKIMNYGHWRGNARMVRAFVDRSADT IDWMIKNGVKFEKLFSNYPNGLYTWHIYEGRGAGWINLFIDKYKKAGQTLLTNTWGQKLI TENGRVVGVEATNKAGDKITIRSKATIIATGGFFDNKTMREKYLRFADADGLAQTGKTGD GIQMAWAVGGGKEGTEVQASYRPGPRGVSTTNQVSATAKQPHLWLSPKGERFCNEEIMLE WPFAGNALERIGGTMFVVYDQKTLDHMEKDQGIDLGVGVMVPVGTKLTDFQKDWDGAVQA GWAFKADTLDGLAKATGMNADKLKKTVAEYNGYCDVRHDAEFAKDPKYLREVKTGPFYAI KSVASSLGTLGGIKANERFEVVTPEEDPIPGLYAAGNDVGGMYGDSYDLLMAGSTVGFAV NSGRIAVDSAAEYIRTLK >gi|319805896|gb|ADMF01000003.1| GENE 56 74222 - 74938 568 238 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302860184|gb|EFL83261.1| ## NR: gi|302860184|gb|EFL83261.1| putative cyclic nucleotide-binding domain protein [Burkholderiales bacterium 1_1_47] # 1 226 1 227 230 145 37.0 2e-33 MRRIFEQLPYFLPAEPAPFARLFLTEGIRRKVAKGELLKRGGESQRLFFLESGLCAYYAA EAENHRPTILSVLLPGRAMGDLTASVGTRCNVFTRALEKSVVRVVPPAVLTAALMKDPAL AQLEIRSVIAKEESILEGMTANFIRPPAERIVICAKALCRAENVSPSSGWHRLPLTISAE RIGEIVNLNRVSVARQLSFWMKADLVRRDGRKLLFSDQLFAAVDDWIENPVPKCPLPA >gi|319805896|gb|ADMF01000003.1| GENE 57 75329 - 76777 1569 482 aa, chain + ## HITS:1 COG:RSc2451 KEGG:ns NR:ns ## COG: RSc2451 COG3264 # Protein_GI_number: 17547170 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Ralstonia solanacearum # 149 472 112 430 447 198 40.0 2e-50 MAITETAAASSAAAEAADAAVHGPDLSMGTEHLTDAIADTTNYFVVFFEKLLEGLTWGNV LFQLCVIVVAVLAGLMCSKLVRSVVARHMPPHELKERFTQRMKRLALSVVNAIAFGLAAG SVTACCAYGAVMMGYQASSLVLLKVAYSFFYAYSLLAIVLGLLQAMVGSSIISPRITKSI VVTFWILAILQFFGVLTHLVDVLDATAIPIGSGNMTVWKLFMAVCSVLLTVAAANWISEM IEQTITDAKSLTGNIKVVLGRVVRIFLMVIAVIIGLGTVGIDLTILSVFGGALGVGLGFG LQKIASNYVSGFIILLDKSVKIGDLVTVGGFTGKVTEINTRFTVVRSAGGVESIVPNESF VTSQVQNLSYSDSPTLQTVEISVAYNADVKKALELMLDEVGRDRPRIPKDRKPWASVSRF ASSGIDLNVNFWVEDPVNGTAGIKTDIMMNLLRRFAEAGIEIPYNRLEIDILNNKNKALE NQ >gi|319805896|gb|ADMF01000003.1| GENE 58 77651 - 78331 260 226 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKYGRFTALVLALNLVFDGVAFAGHNNDIEINSDRNFTNNETITSDKRTIIGSGVTITIA PDAELRLINNNTTNDQASVVETGLTGASDIAFNGGKLILRREGDGVIIRANGGTTSALTF NTESTLLNGTASRGIDADKSSPVVFADGFTLNLDRSGSTTGRDVAGLRLAQRAHLNTTFA DVKLTAGDSDSSLTGIILDDGVLSANKLNIDINGRNSKSLKKILWF >gi|319805896|gb|ADMF01000003.1| GENE 59 78876 - 80378 771 500 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1393 NR:ns ## KEGG: CCV52592_1393 # Name: not_defined # Def: putative high-molecular-weight surface-exposed protein # Organism: C.curvus # Pathway: not_defined # 68 500 287 714 728 87 22.0 1e-15 MGKGKVQFTGVTRFQYVGRTFGGLYLTVGSGNADENSYWNVTGLSQLSTLTIAPNASLNF LLTAEALSELTANKALITAYGTVPVILHSSASAAGASTITLSGAGLNLQAGDEIRLIESY AGVALDDEHNLLTAGTSLNELKGNLNVKHMASLSRVQESDLTKDDYDLTMKSSYLLTATI KNKRPNIDKVNDQTNALMQSSIASAAAMYAADELLIDSTMKSRQGVRQTGPFAAARAGKY DLDVAGALDTTVTSGLLGYAFNLRDSEVGAFLEMGHGTYDTRTVATTLVGETKGDGKHNY VGFGVYGNYTTPMDWLHVTGYVKGGWLRNEFSVPLAGVKVDFDRTSNYWGAHLGAYGEFQ ASEKFKSRTFLNYFYDGRESEMHTASGSAEVAGAKFHFASFNSHRAQLGSVFEYAYTADL RPYIALTYEYTFKADAKGRAADQYGDLALDGTDLEGSTGIVSLGWTYQNEARDFEFDAGM NGYAGKRRGISAQLQAAWKF >gi|319805896|gb|ADMF01000003.1| GENE 60 80828 - 82408 1629 526 aa, chain + ## HITS:1 COG:FN1655 KEGG:ns NR:ns ## COG: FN1655 COG2461 # Protein_GI_number: 19704976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 9 519 8 510 512 540 55.0 1e-153 MRENLGKSIDEKKLQTMMELKRAYNAGEITLEEGRKRAKAELGTLEPYEFAVAEQGQQSL DPDECRKEDIQAMIDLFSDVLSTKRPELPADHPLSHYYQENDTLRGILKEIEDLVQYPLI KNQWLELYDRLEKYKIHFSRKQNQLYSALERHGFDRPTDTMWLLDDFIRDEINKARSLLD ADKDDEFIAMQQTIVDDLRDLMAKEETILYPTSLALIPAAEFEQMKAGDREIGYAWGQTA QQAEPVKAAPEAKAADGDLAADLAALLAKYGHKTASPQQTFDVSTGNLTLDQINLIYRHL PVDITYVDENEIVRFYSDTKHRVFPRSKNVIGRQVQNCHPRTSVFVVMEIIEKFRSGEQS KAEFWINKPGQFIYIIYVAVRDAEGKFRGVLEMMQDCTKIREMQGSRTLLNWENSVERLH QIQEPEAPARQNPAAENAAAAPSEGAKTVPEITAETYLKDLIKDFPALKERMARISPKFK LLQTPLARVMLPHVKIADISARSGMEVSTLIAAIKEQIEGIIAGKP >gi|319805896|gb|ADMF01000003.1| GENE 61 83448 - 86144 1299 898 aa, chain + ## HITS:1 COG:no KEGG:Dvul_2968 NR:ns ## KEGG: Dvul_2968 # Name: not_defined # Def: outer membrane autotransporter # Organism: D.vulgaris_DP4 # Pathway: not_defined # 466 898 301 721 721 76 24.0 4e-12 MKKGNLSSVTLAVSLVFGGNTIAANPCIDKSRDFEESETYSVDGVDTVRSKRADQLVMIK IDPEETLTLQNTNKEKRSRVIKSEKGNIVFFGGNLILQKSDDSTNYGDSDSYNRHFIRVS EGALLTVDTQSTVMEGSVARGVVLSGMGLFTRGFTMNVDRSTVDLSPQRTFGADVRPDGF LNTKFADITMTAGAQDPKMNGIRVWHGGRFSAESLSLQLNGSGSKNLEYIDALYVGQGDE SKYKNPAEQITISGPIRISIQDAPNARGCALALLSNRDYSIAGKTDISVSKAKTAYGLYA FHRVNVLDELTMDFRDNTEAIGIRAASEADVTAKAANIQMSGGITQAVYLKNAAKVTVTD SLTTNASQALVGIDNSAADIQKDFVTLSQSEISAENDARIYINSTKKGLVQFSGNTRISD NGTIAMHVGSGTADKNAYWNITDRSQLTELSVAPSASLNFLLTPALLSSLGPDEAVVSVK GSSPVLLHSDAGKSSCITLSGTALNLKAGDEIRLINSSNGIALNDLTNRLAAGTSVSELK RDLNVESVKSLARVEKSELTQDDYDLSMKTEQMLIAKIKNRRPSKDKVNDQTNVLMLSSL SSAAALFAADELLIDSTLKSRKGTRQPGPFAEARVGGYELDVRGDLDETIVSGLLGYAFK LQQSEVGAFLEMGRGTYDARSPTTSPIGHVKGDGKNNYVGVGIYGNCAAAVDWLHFTGYV KGGMIRSEFDVPIAGVKAEFDRTSAYWGAHAGAYGEFQLTKKLKNRTFLNYFYDGREGES YKAAGSSEVSGATFHFNSLNAHRGQLGTLMEYQYDRRMHPYAALTYEYAFKADAKGHAQD RYGTLVLNEADLEGSTGIASLGWTYQNYANTFDLSIGLNAYTGVRKGYNTQAHASWKF >gi|319805896|gb|ADMF01000003.1| GENE 62 86246 - 88066 2798 606 aa, chain - ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 1 605 5 609 611 824 65.0 0 MKFKSTVIAASVLAGIMSLSAGAYAMGGASGAHVNYPTTGKIGAVMMNPYGIAPLTAVIR NGGYSLSDISVRIVPKDGGQEITYTVSDAKARTHGGIPIFGLYAGYRNTVEVSYTKTTEG KSERVEKEVYRIYAGPANIATAGYAGVTSVFPVAEVKKVDPAFSDRLYLINNMIAATPNT TRAVWNNPMGGALEWNRYPQNAIYDTKGEIRWYMEPSKIYDPNNIYMAGIMMGFRQNNDG AFTWGYGQRYVKYDLMGREIFNRQLPDGYADFSHAMDPMQNGNYLVRVASADHARPDGKH VRTVRDVIIEVDQNGTVVDEWALWDILDPYRNNVLKALDQGAVCLNIDATKAGQTITAEQ LAELDKTDNFGDIVGAGAGRNWAHVNSVDYDPTDDSIIISSRHQSALIKIGRDKQVKWIM GSPEGWGPKFADKVLKPVDKDGKPIKCEGSKCEGDFDWTWTQHTGWRVDSKSDKDVFYLS VFDNGDARGMEQPALPEMKYSRAVVYKIDQKKMTVEQIWEYGKERGHAWYSPVTSLTEYY QDKNSVFVYSATAGAQFNFKTGAFESAPNPYIDEFKWGEKEPAVEIQFKNTSGYQAMPVD LKKAFN >gi|319805896|gb|ADMF01000003.1| GENE 63 88218 - 89231 557 337 aa, chain + ## HITS:1 COG:RSc0144 KEGG:ns NR:ns ## COG: RSc0144 COG0583 # Protein_GI_number: 17544863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 29 316 21 293 321 107 31.0 5e-23 MLSNGSFANPKWTELSLGDLMFFLRLVEEKSLTEAAKAQGISLSTASRVLKMLRDVFDDP LFLRSSPQLIPTQRAFELEPEVRALLGAAGALVKPEVFRPADLERSFRIGVVDNAVYAVM RGFVKRFLEAAPRADLEFVQIDDHLFEKLESGEIDAAIYPSSRKLPAGMHELKLIRMGYA LCTRPDHPIALKWRETGRIPWKDVNRCRKIQVSNRGSSQYEIYSMDEKTVVGEELLDRAI AVPFFLVVPGILEETDCVAVLPLLTARLFESEDRIAVMPLHPQTELGRGRETFWARLIWH ERVDRDPAMAWLRGLIKANAERIGDCLDAGADDAEEQ >gi|319805896|gb|ADMF01000003.1| GENE 64 89506 - 90495 774 329 aa, chain + ## HITS:1 COG:BH0411 KEGG:ns NR:ns ## COG: BH0411 COG2378 # Protein_GI_number: 15612974 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Bacillus halodurans # 127 246 107 222 331 69 34.0 7e-12 MSYQAESQSTINEVLLLIAVLQRIPKNRWVSSTEIRKGLAAEGIDLMPRRLQRFLVALVE CEAFHIEVDRRGKPYGYRRNAPDSTLDESSLTPQESLLLRLCQERLKYQLPPCITEAMEP LFSASKTALNENGKSAKTREWLQKVAFVSDTVPMMPPKIKPRIFNAVSEALYRDSKLRVK FHNSRGEENEAVVSPLGLVQQVQRLYLICQFEGYNNIRHLALHRMDEAEVTAFPSVRPQD FSLSQYVASRHFNYSNGGKIHLLIEFTNPETAVNLSETPFNPTQTLQQLEDGAWRLEADM DDTVQLTGWIEAWRERGGFRKVEKTPIEA >gi|319805896|gb|ADMF01000003.1| GENE 65 90550 - 91050 187 166 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKRKTTPLDDAATDSIFDVLGTTPDEASASSESSSVPSETARRSLEPLPLRSVSSAAVP PANSKSPARNTKADTAPRTPKAPQASKSIKPPKTPQLEKSIKEEALALFQKGLTIEEVAR ELMLPPSAVRDWEALYQDGKLTKFGKARIAADEREKQEPTLFFKAK >gi|319805896|gb|ADMF01000003.1| GENE 66 91229 - 91807 692 192 aa, chain + ## HITS:1 COG:L19745 KEGG:ns NR:ns ## COG: L19745 COG1247 # Protein_GI_number: 15673759 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Lactococcus lactis # 1 160 1 161 187 144 44.0 1e-34 MHYRLAVPEDAPALLQIYSEYIHSTITFEYTLPTTEEFAERIRTIAGFYPYIVAEEDGRC MGYAYAHRHMERAAYQWNAELSVYLAKSAVGCGLGGGLYSRLMTLLKAQGVLSVFGCVTS PNPPSDRLHKRMGFKLVGTYLQAGFKNGAWHDVNWYQKMLGDHLDDPKPPVPLSALEKDS ILEVLTGRHLEF >gi|319805896|gb|ADMF01000003.1| GENE 67 91992 - 93029 904 345 aa, chain + ## HITS:1 COG:DR0133 KEGG:ns NR:ns ## COG: DR0133 COG0657 # Protein_GI_number: 15805172 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Deinococcus radiodurans # 81 294 50 248 296 112 39.0 1e-24 MKKVFHTAAAAVLGLSALTIAASSVLAADADSAKLAGWTEGAEVIHVEGKVPRIDMISGV IYSQIKSTRTVRQLRMTLEIPRTKVKKPAVIYFPGGGFTSADHEKFSEMRRALANAGFVV AAAEYRVVPDKFPAILEDAKSAVRYLRAHAAEYGIDPARIGVLGDSAGGYLSQMTGVTNG EKQFDKGDWLNVSSDVQAAVTIYGLSDLTTIGEGFGPEIDKVHESPASTEALLVNGPAFR TYPGASIMADRKAALAASPLGHVDGSEPPFLILHGAQDPLVSPTQSAKLFRALKAKNVDA EYVLVDNAQHGDLPWFQKPVIERVVNWFVKVLKPVKAEEAEGAVL >gi|319805896|gb|ADMF01000003.1| GENE 68 93456 - 94268 1146 270 aa, chain + ## HITS:1 COG:FN0658 KEGG:ns NR:ns ## COG: FN0658 COG1464 # Protein_GI_number: 19703993 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Fusobacterium nucleatum # 24 270 16 261 261 256 54.0 3e-68 MSIANLITRTFTGAAAAAVLAFGFSAGAAAADKVIRIGVTPVPHADIVNFIKPQLEKEGV KLEVVEFNDYVQPNLALDSKDLDANYFQTIPYLEEFVKQHNFKFKILVSVHLEPMAVYSK KFKNVADIPAGSRIAVPSDPTNEGRALKVLENAGLIKLKKDATLLATTVDIVENPKKLSF YELEPAQLPRSLDDVAAAVINANYALQAGLNPAHDSIALEAKSSPFGNVVVVRDGDEAKP EFQKLKAAITSPEVKKFIEEKYKGGVIPVF >gi|319805896|gb|ADMF01000003.1| GENE 69 94601 - 94909 262 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 7 75 21 89 584 86 55.0 6e-16 MYTDADGRTYVYVYRNRWDPEKKQSRIEKRCHVGRLDPQTGQVHIGCKFLTNNPEYAGKF WLYDNNQLIEQEPFEQPNTDNEPFAQQFFDEGLHTAALSESQ >gi|319805896|gb|ADMF01000003.1| GENE 70 95122 - 95316 70 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDWQAAGLSNPSTARCSKTILAPLSVLVGQRKYGKLSQKDQLAVRAALEKADFTQPGFP VEVH >gi|319805896|gb|ADMF01000003.1| GENE 71 95289 - 95516 107 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTMRSETTPQPYKVWRIPFAFDDQPDVFKFRPVIFGGIGQGGVQLMLLSVKVTTHPPKQG IEGEKSHCSTGRLPA >gi|319805896|gb|ADMF01000003.1| GENE 72 95500 - 95778 260 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEAITSLNTKISVTDKELFVKTTEALGLTPSGAIKIFVRMFNQCGGFPFEVRTVPLVNYN NPNILKPEIRNENVVLPASWREDDDYDHDDAK >gi|319805896|gb|ADMF01000003.1| GENE 73 96079 - 96939 471 286 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAATEDTFVDLLCRIPNSDRKELLALWTVLSEVGESRAAFTAAANWLLPALNAAELPKS NIDEQMLDSWQPNEPDTLWHLPAHLQNVVLARITANARILIVDKIRGFISQNDCREFLDK YAHLFHAALPPNGTESAFGLFRSALRQLMDVSDCLIPYVEDQLPQYRIRFITKPASAAIK ELDFIFRKIGASTHRNEDELIVRERRLEHDALVRILASLAARYEKELQIAELPDAEKTKE FQAPFLPFSFAEAMQLFGRSNSLNNSKKLDLWENIAGIEGDKFCKL >gi|319805896|gb|ADMF01000003.1| GENE 74 97127 - 97426 224 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRSRRHTPIGPFFCCNSNHISEKLEKRWRNRMIRAAARNALVRALRLNECLEDVEALYA EPKPWCFIKLYGTEKEGKYWYSFANTPEGAKERTQFMRK >gi|319805896|gb|ADMF01000003.1| GENE 75 98320 - 98538 97 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSETYRYEEISLFPKDLNENYHPSDFAEKVVDPKSFRNILTSTLGWTVSFVLAFFLVVQ LTYTRGNHSTAR >gi|319805896|gb|ADMF01000003.1| GENE 76 98492 - 98881 193 129 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFNLLIRGETIRLLDERQISLAQATADSIATRYRNLGIIAEGALDDFPSQDPSSVAWQRV LQKIQRFAPAVSLHLEKVPGQYESLLSPEAREQSIHEQYVFVSIPVDSPQWHGYLAIEPK LPTASSEQG >gi|319805896|gb|ADMF01000003.1| GENE 77 99001 - 100854 1372 617 aa, chain + ## HITS:1 COG:MA2942 KEGG:ns NR:ns ## COG: MA2942 COG5421 # Protein_GI_number: 20091761 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Methanosarcina acetivorans str.C2A # 246 569 169 484 521 81 26.0 5e-15 MSRKAAVEPKWNFYLDTNKSTGIQYVQTSYNIWVPEKKQPRLGGKAYVGRLFPDGSVRPS KTFLERFPQYADKKLYYFENQLVDREGYLKLNPNAEAQWEELQSQEKTAEQQQEERRESI DNDWRCTARQCGLTSAAWSFLAESDLLKDLEDMLGKEDARVIGALAVYMLDKGVSMNSFA DWLGRVYIPGVKPICGQRLSELLAKIEPDMVDNFFLKRHQRAITKAQARRRELKVKNPKA YIPPLTLAFDSTSISTYSGTIDHAEYGYAKRDPHLKQVNLALACDQDTGEVVYACEYFGS IDDKTSFKPILERMQKVGFDMSETLLITDRGYKSMSNIQKQLDVGLKFLQCTPLNEKSVR ALIDKHSSQLKGIEFYEPKYHCSAVALPTEECESWSQRLPGSGSTQSVKVSVYLYYDDHK AVDEKHCEMAAIDRVLELKNAGSQVDAALWQEYRSCVQETQNHKGESVWVRKNQGIAQRL KYSGCMALRTNEVPNPFRALELYRQRNAVECSYRVFKNQIEGDRMLATQTSYRGKLFVFT LATCLRTMMRVKAEAQAKEFDLKIPGNSLSQVFEILRGVTMQRWGSTDSWRINMLTRKQR ECFALFGMTPIRGTRKD >gi|319805896|gb|ADMF01000003.1| GENE 78 101145 - 102893 722 582 aa, chain + ## HITS:1 COG:BS_resE_4 KEGG:ns NR:ns ## COG: BS_resE_4 COG0642 # Protein_GI_number: 16079368 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 347 581 31 266 269 161 36.0 3e-39 MQADRDRQMRSVVFASGFLFVAALFGVFVIGFLASRPLSLSVGYLTDMIEDFTRSGRKPP VPLQLKHKGPTELLEIAERFAKVAGVVINSQKRLQQLNVNLEQEVARRTETLLQRNSELS ALQKLLTPLNQAAGKSIEETIVRIREILSLKELYFVPKKQNSEPSAETLQRCLIPILAEK RLLGWLATSHTVENDPEALRGLNLLASSLGVVLSNQQLLQSIANQHRMLEEVFSSMAEGV AILDHDGLLLKHNDCLSTILGLDLPSHPRPYLMPLLKSAFVIRLAPGMQKMDAKTALQPQ ITSFACDEIYRLTSIPHATESERTLVAITFNIRAEEKNGLQPSMGIVFRDVSQDVQVEQI KDRLISVVAHELKTPITALRLQAETLATQIGIGEEERSQILQDMQDEAFRLRSLVDDWLD ISRLEEGKVQLQRRIMHIATPIDRAAKIVNARYPITVTRSIDTEAECFRFDPERITQVFI NLFNNAARYHREGADPCVHVTVTKEGDWVAIRVKDNGVGIAKSKMPYIFEHFFQADMSIA RRRGGTGLGLAIVKGIVDVHGGTISVASEVGVGTEFTLVLPY >gi|319805896|gb|ADMF01000003.1| GENE 79 102905 - 103630 550 241 aa, chain + ## HITS:1 COG:slr0115 KEGG:ns NR:ns ## COG: slr0115 COG0745 # Protein_GI_number: 16331854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Synechocystis # 6 229 2 227 241 158 38.0 7e-39 MTEVRPLILVVDDESMIRRLVLANLERAGYDVMSAADGIRALEVYAKAPVKPNLVILDVM MPEMDGFECARRLREKKDVPVIFMTAKTDSASKLRGFDLGADDYVCKPFSMEELLARIRA ILHRSSKARVETNYHKYENGPITLCVEKRQVLIAGREVHFADTEFQLLAILLKDPGVIHT HVELLRKVWGPESIGEVQYLRVAFARLRRKFEEAGLEGGLISAYSGVGYVFRDLRDENVD L >gi|319805896|gb|ADMF01000003.1| GENE 80 103791 - 105074 1096 427 aa, chain + ## HITS:1 COG:no KEGG:CCV52592_1707 NR:ns ## KEGG: CCV52592_1707 # Name: not_defined # Def: citrate transporter # Organism: C.curvus # Pathway: not_defined # 6 421 3 420 425 365 55.0 3e-99 MSTAHIIAQLCMLATLILMITGKTPIYMTAIVGAAISALIAGFPMAGGTGMTVTKMIVSG LNPVIADMTGILLFIGIMQATGFLDVIIRDIVRLGNKWGGGVGVACAGGVAAGVIGALTG FTQPVITAVICGPAAVRLGVRPNQSAGMIAHAGHIGNLAGFTHPTQVAILATAGIGYGLF NVLGFIAAGSIFVLSAIRATADMRRRGIKIDAAEKARIIQEIENREYSTTSWKAFFPFLV LVIGFICGLPIFLVGMAAAIVTMMLAHASPKQAELDMMKGVSLIATPLVATIGFLFMSTV IREIGMVQTVSDFVSPVLSVQPVLILFAVAFLTGFMTQSYAASVAVLVPFLQVTLQTGAD PFASAFAAASGCSLIQYFLTGGPVAALSTVIPVIPGSDLKGANAFQRPSILFGCLVAFII TACLAFL >gi|319805896|gb|ADMF01000003.1| GENE 81 105154 - 106146 778 330 aa, chain + ## HITS:1 COG:CAC1714 KEGG:ns NR:ns ## COG: CAC1714 COG0252 # Protein_GI_number: 15894991 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Clostridium acetobutylicum # 4 328 2 326 331 276 43.0 4e-74 MIDKKVVVVATGGTIAMKYDKEKHGLVPACSGKDLADAVPGLGDIAPLEFVQFSNIASPG MTPQNMWDLHCKIEELLARDDVAGVVVTHGTDTLEETSFFLDITAKSQKPVVCTAAMRGA SDISPDGPYNIYCSVKTAASPQAVGMGVMVCLDEILQAPGEVMKTHSANPATFQSPWWGP IGYVDIDHIVWRRKVLGVKRFHPQALTARVDLIKCMTGSTRDYVDFAVNQGVKGIVIEGF GRGNVPPAMVPGIADAIKKGIAVILTTRTPGGRVLDVYGYPGSVTDTRSVGIAAAGEISA AKARLKLMVVLSEHPEYATQRDKLEEIFDI >gi|319805896|gb|ADMF01000003.1| GENE 82 106269 - 107453 108 394 aa, chain + ## HITS:1 COG:mlr2975 KEGG:ns NR:ns ## COG: mlr2975 COG0154 # Protein_GI_number: 13472622 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Mesorhizobium loti # 10 391 11 392 398 257 44.0 2e-68 MYDRLSARCFMPYPEVPVPHAKEGPLTGLTFAVKDIFDVAGYPTSAGNPTFLALQGIKQK TASCVEKLLAAGAEFQGKTITDELAFSMQGANFHFGAPINGGAPDRYTGGSSSGSASAVS CGLVDFALGSDTGGSIRCPASQCGVIGLRPTVGRAALDHCQPLSKSFDTVGFFARRMEVF EKVAAVLYGQDANPEDTKPRLIFVDDIWTLFGDKVQQALKKPYEAAVGLFGSPASGQFSP QGLERTFLAFRKLQTAEAWESDGSFIETYHPVLGPGVRERFILAKQWHVEDLSPEREIQA ECRAHLTDLLKDDGLAILPTMPDAGIPVGASETFVERFRQKVSMCLCHGGLSGFPWISLP LGTINGAPIGISLVGPKGRDLWLIAQAAKLMFIC >gi|319805896|gb|ADMF01000003.1| GENE 83 107697 - 108614 980 305 aa, chain - ## HITS:1 COG:BH2748 KEGG:ns NR:ns ## COG: BH2748 COG2249 # Protein_GI_number: 15615311 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus halodurans # 96 216 4 122 198 77 38.0 4e-14 MSSPFKLIAVLIAAGFCVPAAFAADAVTSASVVPAAQKTQDGAVLEGTKTLAAKGGDRLP DNVDAVTSASVVPVQYRQTDWKPSGFTDAKDKKRALFILDDPRHESVTYDLCVTAMKFFE EKGFEVELRDLIANKFNPLITTREEFYHAKDGFGKTPADVLTEQAFVKKADHIIFVQPNW QDTDPMFTKGYKLRVFSKGFSYDDGPKGRVGLLPGKTFYTIMNAGWLGMGQGMSGDSLNK NPQEWETWMFAMRVVDDDAAVGKDMKNLGRFVNDRTPSNLDPNYGEKIEALRAVLRKHLA RDFNL >gi|319805896|gb|ADMF01000003.1| GENE 84 109121 - 111322 1809 733 aa, chain + ## HITS:1 COG:STM3644 KEGG:ns NR:ns ## COG: STM3644 COG0243 # Protein_GI_number: 16766930 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Salmonella typhimurium LT2 # 1 729 61 774 777 572 43.0 1e-162 MVRRSYLEKGSASRAGRGADEYVPVSWDKALDLAAGELRRIYETYGPSAVWGRSYGWKST GSVNNAIALMQRLLSLLGGWVETGNSYSTAAISTILPYAVGGKLFKPTAWPVIKEKTERI VFWGCDPLITNDIDWATTLHQGIAEIRKLKDHPRIRTIAVNPLRPKTADVVGSRWMPVRA GTDAALMLGMMYVLITENRLDRAFLANCVTGWNEMEAYILGTEDGVKKTPEWAEIGCGVP AQQIQSFARELSEHRSMIMFGWGPQRARYGEQPPWMAVALACALGQIGLPGGGIGVSYHY ESGGWPVGKGPVLGQIPARPKAVWQSAVPWKGSRAVPVARMADVLACPGKVIDWNGSRIE YPDIRLVFWSGGNPFAHHPDTRALEAAWRRPETVIVTDAFWSATARHADIVLPAATTLER NDISPIGTSTNDGIVFMRQVINPVGEARSDYKIYSELAKRLGLGDAFTEGLDEAGWIQRL YEEAAAAGAAQNAELPAFADFVKNGVHLYAQNPAETRFTAFADFRADPEAHPLRTESGKI VIYSKRIEALHYADAPAHPTWIPPFAADQTSVHGQDAQAQEERKEGLGDWLELVSPKSGA RLHSQLNPVTSARSNIAGREPCEMNSVDAAKRGIANGDVVKVSSLRGAILAGAVVTDGVR AGTIVVRHGGWFDPQESSDGAIDANGCANVLTPDDPASALSNGNIASTALVQVEKWRGEL LEVRAFNAPHLGK >gi|319805896|gb|ADMF01000003.1| GENE 85 111425 - 112954 1273 509 aa, chain - ## HITS:1 COG:RSc2970 KEGG:ns NR:ns ## COG: RSc2970 COG0703 # Protein_GI_number: 17547689 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Ralstonia solanacearum # 351 489 4 151 190 108 43.0 2e-23 MAQNDTNRSSFSAAEAHETRSLNDSAAPTTAGMSSRTPLPCSCKAWRRKGKGESNRLAVI EEPDGSTVDLPFTELTGDLLKGTFADDPRWIWFADHSKSPAAPCGAELLAKFGLTNAEPL HLSETDALRFIRDGRWDGIGLDPKFMAEAARLCDHLLPAARATNCSNILIRETDGTITGD FTIGTGLLKMLPAMGLTICQTRALFLTEEALEPLAAGLARLLTALGAPQAKVIRIDHPLS ADAAKRIEGAEGFSLLFNATNLGRAPNTDQMPIESAEVFQCFPKLKAVLDSVDEPVRPRL IWEAQQRGLEARTTLGLRVVVAREAMELFAGRTLPLCATRSILCDIRREASNIVLIGMPG CGKTTIGKCVAARLLRPFIDLDALVERRVGKSSERIYREDGEEYFRDFESEIIKELSGRH GLVISTGGGACLRPENRMRLALNGTFYWLQRPLDHLSTYQRPLSQARGVEALYEERSPIF EKIAERIIEVQSVEDTAAALIGETVCKPC >gi|319805896|gb|ADMF01000003.1| GENE 86 113333 - 115120 605 595 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 43 570 62 570 592 136 24.0 1e-31 MSLTNAAELRIGVTYLSAPNPSLSIIQKTTDYLNTHLVDGVRLQFYEIRELEEAIRKHEV DLVLSGAGFYRRLHDHGLRILATLVTDRGPDPDHSNGSAMIVLASRSDLKTLEDLRGKTL AATVANGFQGYQIGMGEIAKIESHPFKFFGRTLFVGESSGLDMRQVVDAVLDGRADVGFV KTCYIEDILTAGTLPQKLRILNARLGLPLSCLSSTELYPNWSISSMSTLSHELRREITAL LLQMPEEQGGTYWTVAGDYRSVDELYRRLKLGPYEHLNDWTLLRIWREFSWPIVLLIGAL VGLVLHVMRSDALIERRTKELNEMFAEKEQLAEKNKAFEDAMDRMQRVGIIGQLSTLFAH ELSQPLNNVACYAHGLMKVFTNVNGGVTIDNVKGVIETPLKTISYEAERAAQIVEKVRHF AKPQASERVHSSFVRVVADAVEEFKGAKAIEITITDESQGVMVQIDPMAIRLAILNLIRN AQQAVETANRLPVVTIQVGQIKKGNHNFVFARIRDNGPRIDDETFAQMQTPLFTTKREGL GLGLPLVHSIAERYGGWLKIRRWGDDGVGGLEAEFVITCEPEERDYVETGTSTTD >gi|319805896|gb|ADMF01000003.1| GENE 87 115164 - 115739 262 191 aa, chain + ## HITS:1 COG:RSc1597 KEGG:ns NR:ns ## COG: RSc1597 COG4566 # Protein_GI_number: 17546316 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Ralstonia solanacearum # 1 167 31 198 210 140 46.0 2e-33 MLTSEGFRVKTYESAQTFLVDDTPSEPGCIIADVRMPGMSGIELFDELRARSYPVPLLFL SGHGDIDMAVSAVLHGAVDFVTKPVVPKRLLSAVANALDKDRHARAGWGVPTNASARWNI LTDREQEIVNLIIAGRINREVADDLHISVRTVEGHRATAFKKLGVKTPEEAANLKKQAEG ELSPISPSSLS >gi|319805896|gb|ADMF01000003.1| GENE 88 115850 - 117547 1512 565 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 1 560 4 478 484 110 24.0 7e-24 MTDFSRRSLLKSAVAGAVGAMTFPAVASAAETKFDKEADVIVLGFGGAGAATAITAADNG ASVIIIERQPQATLRSNTRMSGGIFHCPDKTGDRKALKEYAKAMFSGENIPGKLEGEQPE VSDGLAQAWADYTPNLLDWMKSLDPKFQAFATPGFKGAAFPNFPGAKDCGYQVYRASYPD RVNSAKSTYNFPKEQCMQGEAFWKCLETGVFNRKDKIAVDYETRGRTLVKNDKGEVIGLI AEKDGKKVAYKARKAVVLCTGGYEYSKTMRQAFLEGPGVEGWAFYGTLYNEGDGIRMGLD AGAGMMKAGKAASRIIMPAPIRHNGLRIGMITPVVGSGHAIVVNQQGKRYAAEHKVTKDP SRYFFYKEAVRFNIDTLDYANSPSWFIFDETLRKAKPLVGTGISTPGYDFIDWGASDNSD AVKKGWILKADSIEELGKKILEQKDNGGKMDPKVLAETVARYNEFCKEGEDKDFGRLKST LQPVAEGPFYAVPLVAGGPNTKGGLAANAKREVLDWDLKPIPGLYAVGEIASALKFVYQG GGNLTETLVFGQVCGKIVATLPNRA >gi|319805896|gb|ADMF01000003.1| GENE 89 117634 - 118002 165 122 aa, chain + ## HITS:1 COG:no KEGG:GM21_4127 NR:ns ## KEGG: GM21_4127 # Name: not_defined # Def: flavocytochrome c (EC:1.3.99.1) # Organism: Geobacter_M21 # Pathway: Citrate cycle (TCA cycle) [PATH:gem00020]; Oxidative phosphorylation [PATH:gem00190]; Benzoate degradation via CoA ligation [PATH:gem00632]; Butanoate metabolism [PATH:gem00650]; Metabolic pathways [PATH:gem01100]; Biosynthesis of secondary metabolites [PATH:gem01110]; Two-component system [PATH:gem02020] # 24 122 28 121 598 78 37.0 6e-14 MKFFQRLTAAICIGLMGASVSVNAAEGKFLADRHVAKGLPCTSCHVKDGSAELKIDDQKH EACVGCHGWYDAVSKRTQPKNPEEVNPHSQHDGNLPCTECHKGHKPGVNYCGECHMYTFK VP >gi|319805896|gb|ADMF01000003.1| GENE 90 118362 - 119576 1095 404 aa, chain + ## HITS:1 COG:AGl2386 KEGG:ns NR:ns ## COG: AGl2386 COG1473 # Protein_GI_number: 15891305 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 25 399 56 428 430 271 39.0 2e-72 MLEVLMAEFMYADRIPAEILAWGNELAQIRRDIHQHPELGFDTSRTCGVIATKLSEWGVE FDDKLVEGGVIAVVNGNASGPTVALRADMDALAMPDESENAWRSETSQRCHACGHDGHVT WLLGAVRALHAHPNFPGRVLAVFQPAEEIGRGARSVVAAGVLEKYKPLEIYGAHASPVFP KGQIGIQAGPVQASCDFFYITLKGRGAHAARPHTTLDPIPTAALLSESLQTIVSRKVNPI EPAVLSICAVQAGNLRAPNVIPNELQLSGTIRTFNPEVRALIETEMRRMTEHIALAQGLG HEVRIDHLTPPLINSPVCADAAKRVAQRLFGPGCPQPVPMSMAGEDFAEYANRIPGIQTY IGMADETHQAAIHNPKFDFNDEILPLAVCFLSEIARSRLTELTH >gi|319805896|gb|ADMF01000003.1| GENE 91 119622 - 121199 1880 525 aa, chain + ## HITS:1 COG:RSc1380 KEGG:ns NR:ns ## COG: RSc1380 COG0747 # Protein_GI_number: 17546099 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 6 513 5 510 517 478 49.0 1e-134 MSRTFFALSCLAASAAAGTLAFSAPAAARTVTVAVSASFTSLDPYDAPDILTRLASKSFY EGLFTFNSKMEPVPELAEGYETSPDAKVWTVTLKKGVKFHDGSEFTADAVKANFDRLLNP DNKLSRYNVYKFIEKVEVLDPYKVRFTLQAPLATFVRRLAMTNPQMICPSLLKDAHGLEG KKVTAFNACGTGPYTLVSFNPAEELVVKKNPNYRDPSLPKLDGIVWKPVVENSTRAAMLH TGEAQFVFPMPNEQIAQFKGDPKFRIEEVPSIMQRYLSINTTVKPFDDVRVRQAINYAIN KEALCKVAFAGYAVPSATIYPAEIPGALKLGPWPYDPKKARELLKEAGYPNGFTTEIWSG YSNSTSAKVVQFLQQQLAQVGIKTTTRMLEPGVRAQIVYGVKDPKEAKSRLYYIGWADGS MDPDWVLRPLLDSRQAPPKFMNTSYYSNPKFDALLDEAISTTDEAKRTALYQQAQKMVWN DAPWAYLVYEVGTAGADARLKNFHLRADTGIDFREAYWDESESGK >gi|319805896|gb|ADMF01000003.1| GENE 92 121441 - 123195 2433 584 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 87 584 1 481 484 283 40.0 5e-76 MKFTQSIFAAAFAFAAAAAFAAPVTMQGVGVGKHGDIQVAVTFDNGKIQKIDILKNAENP VLAKKVFTDLKDQIVAANSVQLDGISGATFTSKGLFAAVEDAAKKAGVTLGQADKKALKA AVKDLPKNASYDVVVIGAGGAGFSAAIEAKNAGATVVLLEKMPQVGGNSLISGAEMNAAK NWVQPKLGITDDSPELHAKDTYLGGDKKGDMKVINVMTHNALAGAEWCRDYLGVRFEPDN LFFFGGHSRKRALIPVGHTGTEFITKFQAKADELGIPVITNMKAEELIKDKSGRVVGVKA TMNGAEYTFNAKGGVVLATGGFGANPAMVKKYNPKIDERFKTTDAPGTTGEALYMAQRAG AELVNMQYIQTYPICDPISGVIELIADARFDGAIMLNQEGKRFVEELGRRDVLSEAILDQ TGGYCWVLWNDKIGAVSNTVKEHPTEYDAFTKQGIMTTCPDLKCIADFTKIPYDSLKGTV DRVTSMAGKGNDKDFHHRAGLVDMSQGQYYVIKAVPSVHHTMGGVRINEKAQALTADGKV IPGLWAAGEVTGVTHGTNRLGGNAYTDIIVFGRIAGKAAAEAAK >gi|319805896|gb|ADMF01000003.1| GENE 93 123400 - 124572 851 390 aa, chain + ## HITS:1 COG:AGl2766 KEGG:ns NR:ns ## COG: AGl2766 COG1473 # Protein_GI_number: 15891491 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 387 15 396 399 333 47.0 3e-91 MSLLTELEAHAPEYIEWRHTFHEHPELGLETPWTADLVAAKLRSFGIEVTQGVGGHGVVG VLEGSLGPGRTVGLRSDMDALSITETGECPWKSRKPGLMHACGHDGHMTMLLAAAQYLAA HRDFKGKVVFIFQPGEEGAGGALAMIKDGLFERFPVDELYGFHNWTDVPVGEVRCRKGAT MAGQDFFAIRVKGKGAHASAPQLSADAALAAAMITTALQQIVSRNIAPLDSAVVSVTKIH TGSAFNIIPETAEVGGCTRFFSDETGALIRERIEAVTKATAESVGCRAEVEFTPVAAVLN SNARLAEELLAAAREVVGDEKASFADIPQMASEDFSYLAREVPGAYGFLGGQAPYGASNL HNPQFDFDDRVLSTGAALWVTIARRRLAAS >gi|319805896|gb|ADMF01000003.1| GENE 94 124558 - 124686 64 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTELCTHNEAETFASQRFTLPVIKRWYAAMNTFEAAAGLGRS >gi|319805896|gb|ADMF01000003.1| GENE 95 124922 - 126274 1548 450 aa, chain - ## HITS:1 COG:jhp0871 KEGG:ns NR:ns ## COG: jhp0871 COG0477 # Protein_GI_number: 15611938 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Helicobacter pylori J99 # 16 434 1 439 452 468 58.0 1e-131 MEKQQCSASGLSRGELKTLGLSSLGGILEFYDFIIVFFFAKIISQHFFPAGIGEFWAMLN TYGTFAAGYLARPLGGVVMAHFGDKFGRKNMFMLSIALMVIPTFSLAVIPTYETIGYAAP LFLILVRICQGIAIGGELPGAWVFIHEHAPAGHKNAFVGFLTGCVTGGILLGSFVALLMN FIYTPAELSDWAWRVPFVIGGVFGLISIYLRRFLQETPVFKKMRESKALAKFPLEEVVKT SRFGIWISMFITWVLTGCIVVFILLMPGFVGGVLGFSPFETTYFQMGGLVCIVSSCWLTG RLADKHNPSTLCILFSAGFAVSSVAFFSLLYTAAPVVSEVVLAYFATCFFAGIMNFCPIF MCDVFPARIRFSGISFAYNIAYALSGAFTPQLSFALHAYAKTHPDTLGAMGLSAYIVFLA LVSIGTALAMRRVYKNGGAAVSQMEFRPAP >gi|319805896|gb|ADMF01000003.1| GENE 96 126843 - 128051 1238 402 aa, chain + ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 6 378 4 350 350 216 33.0 8e-56 MERTQLAELLAKAEKAEPSELTDQEIVALLGLTDPEDCRMLKDAAFRRTTALMGPYVYYR GLIELSNICTANCRYCGIRKANHDVKRYTMTKEEIVEAAVWAADNGYGSVCLQAGERRDE KFIEFICECLREIHLRTKRPMLPKGVGVTLSLGDQREETYRRWAKACGNPESIRYLARFE TSNPELFNLLHSTPGTNEKNLEHRFECLRSLRRAGYQLGTGVMIGIPGQTLEDLCRDIRT FQQLDVDMIGMGPYLKCEGNDLESLGQMEPKALLQLALNMIAVTRLVMGPINIAAATALQ AIRDDGREMGVEYGCNVVMPNLSPQRFRKGYQLYDNKPCLDDEPTHCASCLERRIESRGR LVGWNMSGSSRRFLRRVGRPDEVRPIKEFTAEGKRLIRLHSV >gi|319805896|gb|ADMF01000003.1| GENE 97 128142 - 129068 934 308 aa, chain - ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 1 301 8 295 301 70 23.0 3e-12 MVLVLVAGYGWWLAHHGTISDAGRATIAKLVNALIPVFLFYSVTSKFGREQMIELLEMAF LPFITIGLNWAISEAMIRVGLVRKELGGVFVASFSGATVLFVGVPMTTALFGEAGIPYLL VYFFANCFFIWSAGLYRIQMDGVARRGGVRPKFFSLKSVKVIFAPPVVAFLLGIVFVLIS IPIPSFLMGTFKSLGSIASPLALIFIGMTIHRVGFEKLRHVPREVWYVMFSCFILRPLVM YLVSAPFDLDPMMRKVFVAATMLPVSSVIAVLARAHGADEEFASEAVGATTIGLVFALPV LLFIVNFV >gi|319805896|gb|ADMF01000003.1| GENE 98 129227 - 131707 2136 826 aa, chain - ## HITS:1 COG:DRA0188 KEGG:ns NR:ns ## COG: DRA0188 COG0178 # Protein_GI_number: 15807854 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Deinococcus radiodurans # 6 826 96 917 922 478 37.0 1e-134 MIPKSILVRGARVHNLKNIDAEVPLNQIVGIAGVSGSGKSSLALGVLYAEGSRRYLESLS TYTRRRMTQAAKAVVDEVLYVPAALAMHQRPAVPGIRSTFGTGTELLNGLRLIFSRLASH RCPNGHYVPPTLNVAAEKEIVCPTCGVHFFAPGAEDLAFNSRGTCPKCSGTGLIRTVDES TLVPDENLTIEEGAVAPWNTLMWSLMVDVCRAMGVRTNVPFKDLSPKERDIVFHGPAVKK RIFYKAKNTNSAGELDFTYFNAVYTVENALTKVKDEKGMKRVEKFLKESVCPACGGNRLS DAARAPRVRGISLDAVCRMTLTQAIDWVKGIEASLPPPMHPMAERLVESFLDAAKRLTDL GVGYLQLDRASSTLSTGERQRMQLARAVRNRTTGVLYVLDEPSIGLHPANLEGLIGVMHD LLADGNSIVLVDHDVQVLREAGWLIEMGPGAGAKGGTLLAQGTVASIESNAASRIGPYLA GRAAPARTSRAAKDEMFAFGRIHLSTLAIHTVKPLEVDFPKGRLTVVTGVSGSGKSTLVL ESLVPALQAAAAGRALPAHVRAAEAPGITRAQLIDASPIGTNIRSTAATYADVHDELRKV FARTADARAGGWKSGDFSYNTGRLRCPACDGTGVVSLDVQFLPDVDIPCPDCRGSRYAKE AQLIKRTNKAGRTYSLPELMDMDVDEALQACADLKTVASRLKTLADLGLGYLTLGEGTPG LSGGEAQRLKLASEMGRGQSDALFVFDEPTIGLHPADVAVLLKVFEQLLASGATVIVIEH DLDVIRSADWIVDLGPGGGDAGGELVVQGTPEDVKAEAQSITGQYI >gi|319805896|gb|ADMF01000003.1| GENE 99 131784 - 132368 599 194 aa, chain - ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 16 187 30 202 205 84 31.0 1e-16 MTEPKIAALDAAKIWQLFNLGGTVLVSAEHDGKTDMMPASWASPLDYDKVLVVVDKSHYT RKLMDQSEYFALGVASAGILPELLSLGSVSKNADPEKLEKSGMALFTQPGFKIPLARGCS AWAIFKKLPETDELSKKYDLFLGQAVAAWGDERVYQNGRPDFEHAPKEMRTTHYVSGGRF FLLGEAVDVEPTAQ >gi|319805896|gb|ADMF01000003.1| GENE 100 132659 - 134197 1541 512 aa, chain - ## HITS:1 COG:FN1380 KEGG:ns NR:ns ## COG: FN1380 COG3051 # Protein_GI_number: 19704715 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Fusobacterium nucleatum # 3 509 5 512 516 498 50.0 1e-140 MRKTILGREIPDQLDGIELKPFAGAFAARPSGTRAAPPVKCRLPGDAKCLPDLDAVFTKV GLKSGMTLSFHHHFRNGDMLMNQVIAATAKRGIKDLRIAASSIFPVHAPLVEFIRSGVIT RIDSDYVSGPVAEAVSSGLLPRAAVFRTHGGRARAIECGDLHIDVAFIAAPSADAYGNIN GVTGETACGSLGYAFPDADYADQVVAVTDNLQPYPLTPISISQERVDWVVELEKIGDPNG IVSGTTKVTKDPVQLLIAQNAAKAIAASGLLQNGFSLQTGAGGASLAAAAFIAEMMREKH VVGSFIMGGITGLLVKMLEEGLFKRILDVQDFDLEAVRSVRENPAHEEVGACLYASPFNS GCIVNQLDCAILGATEIDTDFNVNVLTGSAGAIMGGSGGHSDAAAGAKMTIITANLTRSR IAVIKDRVRTICTPGETVDVLVTEWGIAVNPRRTDLLERFTKAKLPVHSIEKLREKAERL CGKARPIPEGERIVGIVEYRDGTIIDVVRARA >gi|319805896|gb|ADMF01000003.1| GENE 101 134200 - 135069 1071 289 aa, chain - ## HITS:1 COG:FN1379 KEGG:ns NR:ns ## COG: FN1379 COG2301 # Protein_GI_number: 19704714 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Fusobacterium nucleatum # 1 289 7 296 296 235 43.0 8e-62 MRRTLLFLPGNNPGNLQSGAVFGADGIILDLEDSVSPAEKDAARLLVASALKSVDYAGVE RAVRINTLATGGEADIAAVVPCRPDAVMLPKTESIDDIRACEALLEEAEAACGAAKKTLI MPLIETPMGLARCLEIALASKRVTLLSLGGEDYTASLGTQRTREGRELIFARGMLANAAA AAGIDSIDAPFADTNDPEGLFLDTQNARTFGFKGKFAINPRQISVIHKAFAPTAKEIAWA KRILVVIEEAQKKGAGVIALDGKMVDAPIVARARRTIHMADMLGLLEEE >gi|319805896|gb|ADMF01000003.1| GENE 102 135092 - 135352 271 86 aa, chain - ## HITS:1 COG:FN1378 KEGG:ns NR:ns ## COG: FN1378 COG3052 # Protein_GI_number: 19704713 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Fusobacterium nucleatum # 4 85 7 87 94 66 51.0 1e-11 MRQGQAGTLESNDAVITVAEAPAGSGIIIDLESSVKAAYGDTIEAVIRDACREAGIEDAE VDVRDKGALDCTIRARTLTAITRAGL >gi|319805896|gb|ADMF01000003.1| GENE 103 135409 - 136083 901 224 aa, chain - ## HITS:1 COG:BS_yufR KEGG:ns NR:ns ## COG: BS_yufR COG3493 # Protein_GI_number: 16080210 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Bacillus subtilis # 1 221 224 444 448 233 55.0 3e-61 MLGNLFAIMSAGYLKKMGERFPKLSGNGTLVKSGDLSDITNAKAEEAPLDVKMMGAGLVL ACCFFCAAKVLALWIPIPAPILMIILAALIKVLNIMPTVMEQGAKQWYKFVSGNLTWALL VGVGVIYTPWNDVLAAITPAYIFTIMATIFGMVASGLLCARFMNMYPIASAIVTCCHSGL GGTGDVAILSAANRMGLMPFAQISTRLGGACTVIAATILMRALQ >gi|319805896|gb|ADMF01000003.1| GENE 104 135803 - 136807 567 334 aa, chain - ## HITS:1 COG:BS_yufR KEGG:ns NR:ns ## COG: BS_yufR COG3493 # Protein_GI_number: 16080210 # Func_class: C Energy production and conversion # Function: Na+/citrate symporter # Organism: Bacillus subtilis # 2 229 16 243 448 247 55.0 2e-65 METTSKTFWQTACELKIGPVPAPVYLVLAVIVAAATIFGQLPADMVGGIAIMMVMGILLG DIGLKVPILKDIGGPAILSIFIPSAMVYYGLLNSDAIKAITAFTKGANFLYFYISCLVVG SILGMVRTVLVQGFLRMFVPLVVGTVVASILGCIAGMLCGEDLYHTFFFIVIPILSGGVG EGILPLAAAYSEILNQSADQFLVHFVPAAMLGNLFAIMSAGYLKKMGERFRSVPRALRAR CDARQPLRHHVRGLPQEDGRALPEALGQRHPCKVGRPLRHYERQGRRSPARRQDDGRGPR PRLLLLLCGQGARPLDSDPRADSDDHPCRAHQGP >gi|319805896|gb|ADMF01000003.1| GENE 105 136948 - 137616 321 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149011191|ref|ZP_01832496.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP19-BS75] # 2 220 1 222 226 128 34 2e-28 MIRVMIVEDDPMVASVNETYLSRLPGFCVIAKAADGLQALEKIKALSGSVDLVLLDVFMP KMDGLSFLEHLKNLAPSVSVIMITASQNKESLRTALAHGVADYIIKPFTFERFKAALLTF AERWRLLHEAEDFDQSDLDNIFHRGAPPQQFSKGIDADTLEKILASVNAASAPVSTQEVA DDVGLSRISVRKYLSYLEENNRIQGELSYGGKGRPVKLYRAL >gi|319805896|gb|ADMF01000003.1| GENE 106 137627 - 139159 1561 510 aa, chain - ## HITS:1 COG:BH0397 KEGG:ns NR:ns ## COG: BH0397 COG3290 # Protein_GI_number: 15612960 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating citrate/malate metabolism # Organism: Bacillus halodurans # 2 492 24 512 532 315 37.0 1e-85 MLLVILKFIQVYEGDFVHEDVSNRAQAISRLVASNSKLQDWMARSPLTQEGLEGIQRYSE QVRLATGVEFIVIFDNHGKRLSHPNPAKIGLHIQGADESGALRGEEYISVSIGTLGESIR AFTPIFHDGRQVGAVVTGITTANAKTLTEARMTKMLGGISLVFLVGFLAIIIFSRKLKKT LLGMEPEEIALQNTISSTVLKSVREGVLVIDAAGRLQVVNDQARKILAKAHLPSDVLGQP VDRAIPHTRLLEVVRTGRAENDAEQNLGGVVIITNRVPLVVSGKIMGAVATFRDLSDMME LAEELTGANKWIEALRVRAHNYRNTLHVINGLVKNQQYPELERYVEELRIADEVHNGRIA RLIKDQVLAAFLQSKVARAAELGIELDVEPDSHADEIPDAPFRQALLSVVGNLLDNAMDA VNESEERCVRIRITSGQPIWSVEVSDSGCGFKGDPMQYFRKGVTTKGEGHGYGLYLVARA VHAYNGSIEIESNYPAGTVLKIVMQAAGPE >gi|319805896|gb|ADMF01000003.1| GENE 107 139433 - 140464 668 343 aa, chain + ## HITS:1 COG:VC0796 KEGG:ns NR:ns ## COG: VC0796 COG3053 # Protein_GI_number: 15640814 # Func_class: C Energy production and conversion # Function: Citrate lyase synthetase # Organism: Vibrio cholerae # 6 326 14 338 356 174 32.0 2e-43 MEEIRKIQAANPSEWEKVTAFLRERDLPVRREYADACFGAFIGGRLVGTVILSGSVVRNT AVDPEMRHKGIVEKLFTAIVEEARERGIFYLQLFTKSQNAEAFSGAGFRLVENVPPYACL LEFGSCSPQKWIRRICAGGVNPNARSSAVIVNANPFTLGHKALIELAARDAEQCIVFVVE ENQSVFPFDVRLALVRAGTADLPNVRVVPSGPYIISAGTFPSYFLKKNERLPAQTHLDGT IFAHLLAPGFGITKRFVGTEPTDPVTRAYNEALKDVFKKYALELVEVPRIEDGVGAISAS RVRAAWTAGRMDEVEEWVPASTFAYLKSPEGTALCEALRREAS >gi|319805896|gb|ADMF01000003.1| GENE 108 140461 - 141879 692 472 aa, chain + ## HITS:1 COG:VC0801 KEGG:ns NR:ns ## COG: VC0801 COG1767 # Protein_GI_number: 15640819 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Vibrio cholerae # 191 471 30 304 313 157 37.0 4e-38 MSAVRHCYSPDAPQTERLAAYLEEKEARVERRKAFARRHAGETVVQLVLNIPGRIKDSAL LRRLLASGMSEFALRFPQLTECALTNASAGPSALFAAAEAPQSVKEKTAELEALHPWSRL FDFDVYDAGGKTVSLASRHGMGRTCFVCSRPAALCMREKSHSAEDVAQSVTDRLARFAAY ETAFTVSAAARRAGALALRAALYEVGLQPKPGLVDPAHSGSHEDMDFFTFQRSAAAISSF FPRFFAAGEWIADDPAFLLAVLRLIGLEAEEAMYETTGHINTHKGLIFSLGLVLGAAGEV SAAQREAFDELDEKTFIKNVLDKTAELGRLTLTDFTGRPSEETPGMRAHRDYGLTGIRGE AAAGFPAIETPLLALCSLPEADLDARRLLEALFEIMSELDDTTLVRRGGIEALAAVKRCA RDLLQSGALRQASWRDAVHTVDREFVARRLSPGGAADCLSVMLFLIWLAREQ >gi|319805896|gb|ADMF01000003.1| GENE 109 142298 - 143515 1211 405 aa, chain + ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 268 1 253 389 98 30.0 2e-20 MKKTLAALSVLGAFAGSSLAADVTLYGVIDTGLVYQHADADLPDVDTVDTFQMKSGVTAG SRFGLKGTEDLGNGLKIGFVLENGFVSDTGSFTQNNRLFGREAQLNLSGAFGTVAFGRMG SLASGNGTFGLLGSLSPFGTSWGEYAANASTVMSGFDRYDNTVTYATPAFAGFKAYAQYS FDTDSKDDYDGAGLHGVEGKSSVDRYYAIGLTYANGPLNLAAVVDQTNFSTTKWNGVDWG NPVDDALTVTVGGNYDFQVVKLYAGAQYFDNADLNSIDNIFSKDFALSPAQTERFQVKGY GLTIGADIPAAGGTFKVATSYLDGTIDKVNGWDMATAIGATFGEIDISRWNTSAGYLYSL SKRTSLYGVASYSYQTVKGQKDFNGYSLDVAPTVIEVAAGIVHKF >gi|319805896|gb|ADMF01000003.1| GENE 110 143642 - 144190 685 182 aa, chain - ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 4 175 2 167 176 108 39.0 8e-24 MKNILVVSGHPNPSASLANKTILESLRTAFPQAQFRELASLVKDGHFDPVPEQEALLKAD VIVLQFPFNWYSVPGLLKTWIDEVLLHGFAYGSGAKLSGKTVLLSITAGAPEAAYQRDGF TGHTVFELLTPLAVTAKACSMIFAEPVVSYGYSVPAAQNDKENYLANARKHAQALSAQLK AL >gi|319805896|gb|ADMF01000003.1| GENE 111 144533 - 146623 1397 696 aa, chain + ## HITS:1 COG:PM0724 KEGG:ns NR:ns ## COG: PM0724 COG0642 # Protein_GI_number: 15602589 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pasteurella multocida # 122 658 75 563 571 117 23.0 1e-25 MTRLSFRFAKRKSTAWCRWALRFACSVLAAAVSVDIPAEERGTGAVVSLDHSAADLKVPP DAGVIPVPGTDPIRIAVITFALPRDNLLIAEATKLALAPLFPNRGIKLIFCTFEEFDRIV LSRGAEFILGTSGAVTRLSTFGLRPLATLVSKGGPDPNRNEGSAVIVREDHREFQTLGDL KGRTIAASNALSFPGWQIVLGEVAKFGINPNEFFGKTIFTGDARSISDIVKLVLDDKADA GVLRLCAYEQFIERHPEAVGELRVLDRRDNMDVACVHSTDLYPGFTMAVTELISPEAARR ATLALLSMPPTERGARWTIPTNYKSVDALLEAIRVGPSEKLRATMLNELIDDYLTWMLVI ALLILGLLFHGWRAEVLARRQGERVRELMEQKMAQASRLASMQRAASLTQISSIFAHELR QPLTSASLYAEGLARQIRRGSADPDRMAKIADRIADETQRASEIVERVRAYAKGRRLERS VLSAADVMQSAVRLWRGQSMRDFPLWVLVPKSAAHISANAFELELVFVNLLKNAAEAAQA AWAADESSGKPKPVNLTKAPDVLVGSGPMVAFTAEVIGSSVVFMVADSGKPLSDEALLRI EAGSSQPQAGSSQKSNGLGLGLAIVRSIVEACFGAITFGRTDLNPRLTGLAVRVALPLVS TSQSGRTETDVSIPVPHEPAAESAQSLPKDPKDPSK >gi|319805896|gb|ADMF01000003.1| GENE 112 146620 - 147315 689 231 aa, chain + ## HITS:1 COG:RSc1597 KEGG:ns NR:ns ## COG: RSc1597 COG4566 # Protein_GI_number: 17546316 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Ralstonia solanacearum # 9 216 17 202 210 129 39.0 6e-30 MTAASIIRIVDDDPNIHDALAYVLENEGFIVRHYESAESFLINDRPEDPGCAILDVRMGE MSGIVLHDRMKKLGSKLPCIFLSAHGDVDMAVDAIEAGAVTFLSKPVRTEKLLAAIERAL TIAQSLASGDPGQTLDGTPASETALTDEAARQAALTEAARTAFLSLSDRERQAALLAVSG LTNRQIAERLEIAVRTVEFHRAGSMRKLGCHSAAELKAKLSLVPEAREAFE >gi|319805896|gb|ADMF01000003.1| GENE 113 147823 - 148032 72 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLYGESLFGRVRWREPLTAVFWVLSSRFSSVPFVRPVNIESRRNSSQRKTLNAFLEMQGY FCTQKMDAF >gi|319805896|gb|ADMF01000003.1| GENE 114 148296 - 151031 2701 911 aa, chain + ## HITS:1 COG:STM3763 KEGG:ns NR:ns ## COG: STM3763 COG0474 # Protein_GI_number: 16767047 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 1 911 1 908 908 1306 71.0 0 MTDMTKKNRLLGRNAAENGKQRKTRIFAVERAAHQTLDVVLAWLSATPAGLSAEEAKKRL DIYGRNEVAQEKAPPVYRQLLGAYNSPFIYVLLVLVAISCFTDVWLPIAQGEEAEPAGIV IMSTMIILSGLLRFWQEFRTNKAAQALKSMVKTTATVRRPGDGSASQSRAEVDISELVPG DVVYLAAGDLVPADVRLLESRDLFVSQSILSGEALPVEKGDAAPDAALLTTRKTLPNADA KADLLDLKNICLMGTNVVSGHASALVVATGNSTWFGSLAKSIIGTRAMTAFDRGVNSVSW VLIRFMLVMAPVVLFINGFTKGDWLEASLFALAVAVGLTPEMLPMIVSSNLAKGAVAMSR RKVIVKRLNAIQNFGAMDVLCTDKTGTLTQDKIILEHYLDAQGKESSTVLTYAWLNSSSQ SGAKNLIDQAVLRCGESHLDRAVRERFMKLDELPFDFVRRRVSVLVEDTASKERCLICKG AVEEMLSICTHLQEGASLVPLTPERAQGLLEQTQAFNKQGFRVLIVARKRLSDHGKTSLV NDDECGLTVEGILTFLDPPKESARKAILALREHGVAVKVLTGDNPVVTASICAEVGIDAD QVLVGSEVEALSDAELAQAAQTGSIFAKLTPQQKARILRVLQKNGRTVGFLGDGINDAPA LKDADVGISVDSAADIAKEASDIILLEKDLMVLEEGVLKGRETFGNIIKYINMTASSNFG NVFSVLVASAFLPFLPMLAIHLLIQNLLYDLSQLALPWDKMDPEFLKKPRKWDAQNIGRF MLWIGPTSSVFDIATYAVMWFVFGANSAASQSLFQSGWFIEGLLSQTLVVHMLRTEKIPF FQSCAALPVLLMTVVIVAVGIGIPFSPLGAMVGLQPLPWTYFPWLAAILFSYCLLAQGMK RFYIRRFGQWF >gi|319805896|gb|ADMF01000003.1| GENE 115 151462 - 152946 57 494 aa, chain + ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 11 470 10 473 563 195 31.0 2e-49 MIIEQDVLEALEHMRQIGADTQHWEVKEAVVDLPKSLLDTISAFSNMHGGTIILGVSEKN GFHPAKSFDANKTYTKLQTVGDRLTPVVRMEIEKMIFENQMIVVAYVPELPKNQKPCYIT QKGRYEGAFIRSGDGDRRLSPYEVDRLAEGAFQPHYDIEPVAAASIDDLNKNTLTAIIRR ARDIFPRVFATLPDETILIQLGVLTKVDDRICPTLSGLLVAGIFPQRFFPRLEVVFTVYP GVSKTGNEKTGVRYLDSKEIVGSIPDMLVETLTMVQMRMNTGAVLEGALRKDVPDYPLIA VREAVANALQHRDYSPDGRGTHVEVNMYSDRLEITNPGGLFGSTTIESLGKEGISSSRNE YLSRLLTYTPFESGYVVENKGTGFMVIESSLAQALMPPPKIQNSLTFFKLTFEKRRRTMI EMSNRSWEVIDEAIIAELTSRGSCSIKELMAMSGLSRATMTSHIRKLVRTGKVEPTENAR SPKQRYRVVRNDHD >gi|319805896|gb|ADMF01000003.1| GENE 116 153226 - 154185 1102 319 aa, chain - ## HITS:1 COG:HI1066 KEGG:ns NR:ns ## COG: HI1066 COG3301 # Protein_GI_number: 16272997 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Haemophilus influenzae # 12 311 11 318 321 139 34.0 1e-32 MDGVLDFSIGLTEGVAWPWPIAVYLFLAGISGGSLGVILTMMKLRGLSGDEPLLKASASI ALATILLGMLCLVLDLTDPLFFWRILVFYNPTSVMSVGVMMLLFYIPLTAVLTVIVLRHS LKWLPFGLGSLVEKLGDIFNKARGPITWIVLFLAFGICAYTGFLISALIRYPLINTAVLP ALFVASGVSAGTAAAKLLATAVFGEKRDSHTMHILHLAEWPMMAAEISCIFMIAMAMIFG MAGAQAAVTAFTTGVWATVFWVGAVGVGFGVPFALGMTGCTRSAAGFWTAGFAAVAGMMC LRLFILYAGQLNSLMLTPV >gi|319805896|gb|ADMF01000003.1| GENE 117 154185 - 154844 488 219 aa, chain - ## HITS:1 COG:PM0025 KEGG:ns NR:ns ## COG: PM0025 COG0437 # Protein_GI_number: 15601890 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Pasteurella multocida # 7 219 6 225 226 173 42.0 3e-43 MTQNIDRRSFLTAAAGGLVVISLGGCTSDTVDGKKRPHYVMVFDQNKCVGCGECKRACNE ANHLPPGRSRVLLQRMPGPDRHYIRVSCQQCVDSPCVKVCPTGACHHDPETNIVTMNTDR CVGCKYCIAACPYNARWINPETKVADNCDFCLHSKNLAAGELPGCVAHCRFHALSFGDLN DPNSFVSKLLKAKDTVRIRPWLGTEPTLRYIPVVKTGVR >gi|319805896|gb|ADMF01000003.1| GENE 118 154967 - 156052 1566 361 aa, chain - ## HITS:1 COG:no KEGG:Shewana3_0489 NR:ns ## KEGG: Shewana3_0489 # Name: not_defined # Def: cytochrome c, putative # Organism: Shewanella_ANA3 # Pathway: not_defined # 56 345 406 703 709 240 40.0 7e-62 MNTRIFTTGALACAVFLAGAAQAAEQAADPYPPVKFDLPEHQAFVDSLKLDPARHQGPQT KEEIKAELTKIFNEKTEQHALTKHYEKGLTCVTCHDQQRVGGPDWMTSVTAPEMKKNCGD CHETQKAVFAKTDTHQKITCVACHMPNIPSPEDFTGPDAVEQYYSAVRRSHLYRINTDPT AQTLIRSDAKEGSGERLWTYALDKKGHAYVDIVWSCGRATPGDYTLSGDAQGCHSPATST LDEGLRYGSQQAIYDEIQKWQEPVKAKFAEIEKGLERIKQLLEVTKLTPEELAEVHLMLD KAQEIYDQVKKDGSWGVHAPRYLLDRVTSGAAYIVRAQAIVDNGGYQTPADKRAAEKKAA K >gi|319805896|gb|ADMF01000003.1| GENE 119 156175 - 157140 1061 321 aa, chain - ## HITS:1 COG:no KEGG:DMR_29720 NR:ns ## KEGG: DMR_29720 # Name: not_defined # Def: hypothetical protein # Organism: D.magneticus # Pathway: not_defined # 199 311 118 230 239 75 38.0 3e-12 MNREAEICADMNAAEGAAQASLAGSSAAVIEEHAPSALDELSRLDADVLILVDLVADASR RVELIERPALFAAFREKAAAAPIPKAHELLEDADRQMDSTYNRAPGTVSFVPPKTKNREE REANRLKVPTLRDQREAFTRRELLRGLLEGRLAETAQALERENAAAEAAEAQEAPEPREI TEEYFNQVVDTALARDCGVANLTSWDEKEYFHYRPLLSASYARILSAKNNPAEMICDLVR EHSRIYPRPVTIGTFQEEPFNLKPEELQDLMQSFPKDPKKSDIKFTTSSLGTVFLYSNKY LEDDYADFLAQYLDVDQVMSP >gi|319805896|gb|ADMF01000003.1| GENE 120 157168 - 159273 2706 701 aa, chain - ## HITS:1 COG:ydhV KEGG:ns NR:ns ## COG: ydhV COG2414 # Protein_GI_number: 16129629 # Func_class: C Energy production and conversion # Function: Aldehyde:ferredoxin oxidoreductase # Organism: Escherichia coli K12 # 9 689 4 686 700 530 40.0 1e-150 MSETKKRYGYTGKGLRVNLTTGKFTVEPTFPRFNGLIGGTAFGYRVLWDEVPPDTDCYSP ENKVVIAPGPLSGTGAICSGRTALTTLWPTSWPQSLIASAHVGGEIAHKMKYAGWDFIII EGEAKKPCYLYIHNDHVELRDAHFVWNQGTKRSYAMIAQETNADASIGVIGPAGENLVPM SNMMFDKSHSAGGVGSIFGKKNLKAIVVRGDQAIHIHAKPQEWEALMDSHRAILGAHTQT VVSRVPSPLFEYSSPSSRWSGLPGRVWGAANPPVVINGDIRDVNHIAYRTCSAEFYLGPS LWKYHVRTTGCYACPIRCYSVIRDEETAAKYKVDPITEQTCLALWGRWFFPSLINDLEKP VSREACLVGSQTLDDLGIWCNYGQLHRDFVYFLKKGYWKKYLSEEEYKEIPWDKFENPDP SALQDILPRIAYRKGEFGRWLGETTPKILEHFGLAESAWQKDHDTLYWAHGHPKHHSNED DGQIGCVLNSLYNRDPMSHGHINFTRCGLPIDVQKRIGEKFWGSPDTVDAIGDYTPTNIY KMKRLQWVVARKELHDMLGICSWTAPWEVSPLREKGYIGDIEMESKVFRAVTGIEMTQDD LDKAGLRAFILQRLYTMRQLKSRNPRQDHDQYPEWIFWDPKGKAPFTKGTIRMERSDIEK SFDLFYGLMDFDVKTGAPTEKSLKEYGLDFALPTMKQEGLM >gi|319805896|gb|ADMF01000003.1| GENE 121 159298 - 160002 770 234 aa, chain - ## HITS:1 COG:ECs2381 KEGG:ns NR:ns ## COG: ECs2381 COG0437 # Protein_GI_number: 15831635 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Escherichia coli O157:H7 # 48 207 53 205 208 118 43.0 9e-27 MELNDILEKLSLPQDLTRRGFLKAASAAAALGLLNDARAKNGVRPYVILETAKGLIIADP NLCVACHRCELACTEFNDGKATPRLARIKITRNVMFGPSGTNPIPPTFGVHGNGLVVQDT CRQCPHPVPCANACPQGAIQVDPKTGARVVVKERCIGCHLCEKACPWDMMSFDDEENKAS KCFLCNGDPKCVKACPAAAIRYIPWTDRSHEEARRVPHGYLARENAAECSICHR >gi|319805896|gb|ADMF01000003.1| GENE 122 160838 - 162034 816 398 aa, chain + ## HITS:1 COG:PAB1436 KEGG:ns NR:ns ## COG: PAB1436 COG0303 # Protein_GI_number: 14521620 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Pyrococcus abyssi # 32 396 28 399 402 117 27.0 3e-26 MSAAFGPHSSSGFILRPVALPPVWYHPEPTLIRLCDALGAELQEDVFAPNDVPSYDLALR DGWAVNASEAGHRKVLDDVVENGRTPPDLPPMSAIWVNTGGPIPKGVTAIIPSADRSDLA DAQKAAEPENGIMRRGAEWCVGDLLLKSGVRIGAAETALLFEAGMDVVKARSLASVGIIA TGSELRDFVCRAEGPTRVSSDAAYLRSLLLDAGIRDVWARSAADDSAAIAAALTGLAVRS DVLITIGGTGRGSKDLTRRAILEAGGKLLDSQEADRCSGGASPFIAGELDGRPVIGLPGN PLAAMMIAQRVVLPLIAARSGIALHEKVVRAAFSGNIPAGKTGELCVSLCGCGDARIARA VQKGTGSVLLLRDAAGVVKVGKDGIKAGDEVDVICFIN >gi|319805896|gb|ADMF01000003.1| GENE 123 162433 - 162720 309 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFLFERNPRSTIKKGRKAPKTTVVCCRTSDALKAEVDALCRRNNLTTSELVKNFIEECVK RDSTTWWEGEAQKRIELVEIDTNHLNNGNSHQMGF >gi|319805896|gb|ADMF01000003.1| GENE 124 162735 - 163961 951 408 aa, chain - ## HITS:1 COG:STM2305 KEGG:ns NR:ns ## COG: STM2305 COG0318 # Protein_GI_number: 16765632 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Salmonella typhimurium LT2 # 64 363 142 447 455 81 28.0 4e-15 MKTDEAGIVISGRSWSASDFVRADGTPGPWTSKALEADPLSFEAELGRFLTELFSPGAAV TVHTSGSTGAPKAFAAEKSRMRASARATIAFLRLKPGCTNLLAMPLRFIAGKMVVVRSVE CGLNLIPVEPCANPFLEHREAVDLCALTPMQAATVLANPATSRFLLESRAVILGGGPVDE ELTAKLQSAQGAVYASYGMTETLSHVALRRLNGPTADAGFRALPGVTISLSALNTLQIEA PAVAAQTLITHDRARFNPDGTFSLIGRLDNVINTGAVKIQIEEVEAKLKPFISGRFAVSA RKSRLFGEEVVLVLEGAPALLSALDFSRMRQALGRFERPHWVICTSELPLTGSGKPDRPA IRKAAETLFAEPWTALEAGAASNIIGSRWDSFSTGQSLAKPAERQAAS >gi|319805896|gb|ADMF01000003.1| GENE 125 163993 - 164817 1035 274 aa, chain - ## HITS:1 COG:SA0898 KEGG:ns NR:ns ## COG: SA0898 COG0447 # Protein_GI_number: 15926632 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Staphylococcus aureus N315 # 3 265 4 266 273 368 62.0 1e-102 MQRQWTPIKEYSDILFEYFEGIAKITINRPQVRNAFTPTTVAQMSEALVICRQRNDIRVV VLTGAGDKAFCSGGDMHVKGIGGYIDPTGVPRLNVLDVQKQIRSLPKPVIAMVNGFAIGG GHVLQVVCDLSVASENAVFGQTGPRVGSFDAGFGASYLARCVGQKKAREIWFMCRKYSAQ EALEMGLINKVVPFDQLEDEVVDWAKTIMNHSALAIRMIKAGLNAELDGQAGIQELAGDA TMLYYMTEEAQEGGRAFLEKRVPHFKYNTDPSNP >gi|319805896|gb|ADMF01000003.1| GENE 126 165106 - 166404 1077 432 aa, chain - ## HITS:1 COG:CAC0476 KEGG:ns NR:ns ## COG: CAC0476 COG2195 # Protein_GI_number: 15893767 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Clostridium acetobutylicum # 28 425 4 401 408 397 49.0 1e-110 MALDDASLSIIQLLLRDFAAMTHSAPNVLERFLRYVQFDTQSDETSAAAPSTAKQLKLAE ALTDELHQLGIGNAVIGQGGIVYAHIPASPGCEHLPAVGFIAHMDTSPDASGCQVKPQII RFDGTDVLLNQTEGICFPVERFPEIKKYIGEDVIFTDGTTLLGADDKSGIAAIMDMAAKI TADPTIAHAKLCIAFTPDEEIGRGTDNFDLERFGADWAVTIDGGEVGTLESENFNAGSAV VDFQGVGVHPGSSKGKMVNALRMAAAFIDALPADMAPETTEGREGFLHPNQLEGTVTHAK LHLLIRDHDRALYEEKKVLLERIAEDIQSRFPNGTVTLSVKDSYENMKPYIDRVPAVMEH VRAAYRAAGLEPIEEPIRGGTDGARLSVMGLPCPNVFTGGLNYHGIYECLPVKSLELAAN VAFELAVQSGKK >gi|319805896|gb|ADMF01000003.1| GENE 127 166559 - 167446 942 295 aa, chain + ## HITS:1 COG:no KEGG:CJE1799 NR:ns ## KEGG: CJE1799 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_RM1221 # Pathway: not_defined # 100 272 77 243 247 70 28.0 5e-11 MTAPDESMHSQEEIRQINAMLKSQLPFIGAAALSRPGWDAEDFIESFAKDWGIELEVLPD ERGPGQPFAAALPGTGVVINVIERPGRMGIERFIDGAAENYLWPEGRSLIRGMQSELMIA VGGGTHRSTQAALFIRAAATILDNESAIGFLDCDVLREPVHFRKTALALREQALATPILF WIGLSRLPEGADGLPRLKAWTNGLARFDKLEMEIPSTAADIHDAFILLNSAACYVLDHDA QMQPGEALEWKDGEVPLSLGKSSAIDEDQDVLIVDLDGLRPRGDGVVENKDEGEA >gi|319805896|gb|ADMF01000003.1| GENE 128 167731 - 169038 1110 435 aa, chain + ## HITS:1 COG:L157472 KEGG:ns NR:ns ## COG: L157472 COG0477 # Protein_GI_number: 15672136 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 1 385 1 387 393 244 36.0 3e-64 MKDRLWTKQYLLVIVTNFLLYVVYYQLMLWTTSYAMHIWKADVSEAGLAAGLFIISALVA RLLAGHFIDGLGRGFVLRCGTALYAASMLLYFFITSMLEFEAIRVVHGFAYGLASTAAST IVATIIPLKRQGEGIGYFTLGVTIASAIGPFLGIWFTQHGMYEASVWICSAVGVLAFVLS LLIRTPAHRMTEAEKKEMRTLKFSTFFQLEALPISFIAMLGGVCYSTVLAYIGAYSQSLS LFWAGSVFFLGFAFTSIISRPVTGRLLDEFGGSVVVYPALIFLAAAMVLIGAARSNGMLL SGALVLGLGFATITSACHALAVFVSPQQYVGRATATYFVLLDVGVGIGPYTLGLLVPYFG FSAVYFAAASVAAVGILIYWAVIGRTGIFSTLVMRKVRSVRLNQIEIDPRDVSSAYRRGE EIEFDDPQPNQKKDA >gi|319805896|gb|ADMF01000003.1| GENE 129 169004 - 169225 78 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRSLIRRRTLNCAGIHNTALGMTAGKIIQIISNPLFGETAFCSRGLFIHGMTGSAMECL SLIADVQQKAQGG >gi|319805896|gb|ADMF01000003.1| GENE 130 169333 - 171159 2846 608 aa, chain - ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 3 606 5 610 611 800 62.0 0 MNIKAKITPVALAIALAAGFGLPAAVQASGGGSGPAVTYVAPGQIGEIVVNPYKIAPLTA VIKNGGYQLKDATVRVVPKQGGQEISYKVTDTLLRTHAGIPVFGLYPDYNNTVEVSYTIV DQGQERRVEKEQYRIYAPAVYTPVNGSMAQHHNMFETEVVKVDPEFKDRLYLINNFLSTA PKQARVVWNNPTGGALEWNYYPQNAIIDTTGEVRWYMFVDPIYDPETIYHSGIMMGFHMN QDGFLTFGYGQRYAKYDLMGREVFNRRLPTGYADFSHALDPAQNGHLFLRVSSSDYRRPD GKRVHTVRDVIAEVDQNGNVVDDFRLFEILDPYRDVVIKTLDQGAVCLNIDASQAGKTLS AEELAAMDKNDTFGDIPGVGPGRNWAHVNSVDYDPTDDSIIISSRHQSAVVKIGRDKKVK WILATPTGWKEDLAKKVLTPVDKDGKPLKCENNRCEGGFDWTWTQHTGWRIDSKSDEHVI YLSVFDNGDGRALEQPPLPDMKYSRGVIYKIDQDKMTVQQIWEYGKERGHDWYSPVTSLV EYENDKDSVFVYSATASLDLSKFNTEAPNPCINEFHWGSVEPSVEIRIKSSLGYQAMPIS VERAFSGK >gi|319805896|gb|ADMF01000003.1| GENE 131 171318 - 172289 803 323 aa, chain + ## HITS:1 COG:RSp0692 KEGG:ns NR:ns ## COG: RSp0692 COG0583 # Protein_GI_number: 17548913 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 5 304 19 313 321 87 25.0 2e-17 MKTTLDRSALLFLKTLYETKNLVNAANQLGIPPATASRMLGKLREVFNDELFTRCSGGLA ATWRTTQAMPDVIRLLADYDQLLEPKLFDPKTLKREFKIAGVDHGVIFLAPAIAKISELA PGVSVDMTELTNDWPVQLRTGELDLLISPMETVPEGFPWLPLWEGRTTGIVVRPGHPLEA LYEKTGRVTESDVIRYGFVEVTWRPTTYYRLTQSRLSPLLSERNIVIKTPYFMGAAKIIS ESNLVMLLSDIMADWFISLGALRRIPVVSEELEHVQSKGFVTKLIWHERSHLDPAMQWMR GMISYAVKETLSGGHVVHPEEGR >gi|319805896|gb|ADMF01000003.1| GENE 132 172577 - 176164 2132 1195 aa, chain + ## HITS:1 COG:no KEGG:Spro_3913 NR:ns ## KEGG: Spro_3913 # Name: not_defined # Def: outer membrane autotransporter # Organism: S.proteamaculans # Pathway: not_defined # 128 1168 99 1080 1091 224 26.0 2e-56 MGIAPFVKCSPHVKEEAAMSSAQNASIFQSAWLAPFPRLTSIAAAVLTLLTAPVANASVI AAVKNAQGNDVMLFKLLSGAESGTGEDVSAADQGALLEAGAWLGELFGTPATAPTVIAAA NPFVTYASGGAWFDDNGRPAMALSWTEGLSSSQPSGSVYLGPAPGASYDYSPLAVLPAHA LGSSRISTILHELAHSAGMAIIETGDYLGFECPNGWCHTAFTEKLTFNGNPIKAGSSLSG LVSFDSMPANLQTELNKVRWYLGYSGIGFQGKNVREVIGEETVMYFPDEVTDSEDAVQKA ISVTGAIPVLGAEMGNLDFSHLELQNGLLSHQSWRNWGTFMEAELAMLQDLGYQLDRKRF FGTSIYASGIEYTVGQAFWARNDREEWIKDQPSQQTNAVGVHVYGSRSKVTVAADQLADG AGSIGVRVDGSANQLSVNENALISANGTGGIGMAFTYGRSHTLLLEGKVQALGSGGSALV FDFGGSILGDENQVRGSWTAGAATEYGWLTFHPEELNFPQVLQGSLIKSAVIAGTLQGSD AAIRIGPTAHVAQIRLADGAHIEGDIVSSWSAVGTAEDFFDGYCSVILADLVNRAAAFVP LGTDVTTNLIFGGTEDGAAAQASDLKPFVYAGNVIGPLSIRMQAADGTDLRLENTINQVV GMTVNRGARLSGSAVFDFTGLNARMAEVGGTLITGSEEIPNFQAGALVNAGTLVSTPSSG SIVILGDYVQSGKLVLGMRPSGELMPLSVLGTTEVRDDASLAVVPGGGWFEGELAKDPHP YGAVSTSGANTEASASLLEKAAWDLDLMTAKDFSPAVDFTCSEGVLKAAHQKNAYSKFLT SSAPSWQWGLAKQLDQAASQAPEVLHALYGDLDFSASDGSDIVRALGNLGNFSRDDSLRA LFSWERLLNRQLFAHHAAAEEGEHQVWAVPLAAHFSDGGGAGTNVTGAVLGVDFLWGETQ TAVYAAIGHMETSARKEHGASRGEGIWLGGKLGRTFASGLRFEGQLRGGIYSAERSRTAE LAQSISRIETDETVYALSGALRSGWMGTLGESDVEFFPHVLMTGTVLRTPTLTESGTGAL SIRRSFLHSAAAGAGLTVNVPAPSQFSDYAWNWSLSIEWTRELTERAGNVSFGLAGAAGE TARSMDWPERNRLAGSVSLELLRKSGFSAALRLDGETMGSAHSAGAASAELRWTW >gi|319805896|gb|ADMF01000003.1| GENE 133 176299 - 177075 970 258 aa, chain - ## HITS:1 COG:alr3187_1 KEGG:ns NR:ns ## COG: alr3187_1 COG0834 # Protein_GI_number: 17230679 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Nostoc sp. PCC 7120 # 28 255 33 257 261 164 40.0 1e-40 MNFKSLSLLAAAGLCTLSLCGSVSAAELRVATNPTFPPFEFQDSNTGTIQGFEMDLVAEI AKKLGDTVKIDKITFDGIIPAILSGSVDLGASGFSVTPERGKKVLFSLPFYKSGLTILVP KANKAGITDFESLKGKRISVQLGTTSMQFAKKIPDAEITTFDHVGDAVLNMMAGNADAVI NDKPVTDYMLHTNKSIAEGTTHLAPIATADYFAMVVAKNNTNLQQDINAALKQLKAEGTF DKLHEKWFGIPADPELLK >gi|319805896|gb|ADMF01000003.1| GENE 134 177452 - 178225 990 257 aa, chain - ## HITS:1 COG:alr3187_1 KEGG:ns NR:ns ## COG: alr3187_1 COG0834 # Protein_GI_number: 17230679 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Nostoc sp. PCC 7120 # 27 257 32 256 261 159 40.0 6e-39 MTKNFFVRTAAAGIAALVLCGSAVADTWRVATEGTFPPFEFYNSTTGEIQGFEVDLVREM AKVMKKDLKLETMGFDAIIPAILSGTIDTGAAGFSITPERAKRVLFTIPFYKSGLTIVVP KGNPKNIQSFDDLKGKKISVQLGTTSMSFAKKIQDAQVTTFNGAGDALLNMIAGNADAVI NDKPVTDYIMTQNKQIAESCLHLKPIATADLFAMVTSKQNTKLKAEMDKALKQLKADGTF NKLHEKWFGVPADPELP >gi|319805896|gb|ADMF01000003.1| GENE 135 178573 - 178992 356 139 aa, chain + ## HITS:1 COG:BMEII0486 KEGG:ns NR:ns ## COG: BMEII0486 COG0864 # Protein_GI_number: 17988831 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Brucella melitensis # 3 133 21 150 151 103 41.0 9e-23 MKQRITISLDEDQAAKFDQLIAERGYENRSEAFRDLIRAAEASQTLSDPPSGATCVAVVS YVYNHHERQLSMRLTQEQHEHGDLVISQMHAHIGHEDCMEAVFLKGTVAEVRAFADKLIA EPGIRHGSINIIPAHVHRH >gi|319805896|gb|ADMF01000003.1| GENE 136 179503 - 181080 1604 525 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 16 510 25 480 484 134 27.0 7e-31 MKTFKIAALCLSMAATAFTVQAKEIKYEADVAIVGGGPAGMVAAAYAAENGLKPILVEKL PGVGGNLMMLEITFGQRTKFTDQDQVYYPSDELIADFLAYSHYMVNPIMVRRFIERSGEN IKWLTNRGVEIVGNTATELNGRRVGHIYKNVFPHRNFIEAMRKIILDNGGQIIVETRADK LIQNADGRVVGLHAKNYLNDDVIVHAKGGVILAAGGYGANPNLLNLLNPDMPADTPITGR KNSTGDGIQMGIDIGAKTAGGEAFISEGALPYKVDYREVINQKTWIAANVLNKGPSLQLN KNGRRFFNEGLSGDFSVSGNALRINGNYLYTLVDDDEKRDLETGSGAVFGYFGHALPGDK MTGLSNLFSGKGRMAEVAFVGSTIEEVAKKAGLDPKAVRATVDRYNKFCDEGVDSDFNKD RRYLRPVRKGPFYIVKGQHTICDTAGGLLVNEDAQVIGKNGDPIPGLYASGAMAGGKYGP SYVYNVATGYASASAMMGGTFAVQDIAKKSFKRKIVYTADLPIKK >gi|319805896|gb|ADMF01000003.1| GENE 137 181095 - 181466 255 123 aa, chain - ## HITS:1 COG:no KEGG:Dacet_2625 NR:ns ## KEGG: Dacet_2625 # Name: not_defined # Def: fumarate reductase flavoprotein subunit precursor # Organism: D.acetiphilus # Pathway: not_defined # 12 115 14 109 116 63 36.0 2e-09 MKQIFAACAAVVLVMGVTAPIHAGTPFSLKHKGVDCAACHKTQTPAQPAAQDACIGCHGQ YKGKAVPNADYNPDRNPRRPVVEVNPHDSHLGNVRCTLCHKEHQASPKTACYECHQNFIL NAK >gi|319805896|gb|ADMF01000003.1| GENE 138 181756 - 182499 510 247 aa, chain - ## HITS:1 COG:BS_yycF KEGG:ns NR:ns ## COG: BS_yycF COG0745 # Protein_GI_number: 16081093 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus subtilis # 7 238 1 235 235 157 38.0 2e-38 MTNDTVMNKRILLVDDERNLNQLIATNLKFEGYETESAYSGIEAIDKLGRFSPDLVVLDV MMPGMDGFEVLEHLRHASSIPVILLTAKNRVDDRIRGLTLGADDYLGKPFAIDELTARIE AVLRRSRPSQPAPKEPEETIAFASLKCNLAQHSASANGIELPLQNLEYQLLICLVKAGER VLSYNYLLSSLWEDDRGDIATLRVTVGKLRGKIKQALGYDPILTVHGIGYRLHTPANNHP DFKNKSL >gi|319805896|gb|ADMF01000003.1| GENE 139 182504 - 184948 801 814 aa, chain - ## HITS:1 COG:SA1322 KEGG:ns NR:ns ## COG: SA1322 COG0642 # Protein_GI_number: 15927072 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Staphylococcus aureus N315 # 472 809 267 585 588 128 28.0 4e-29 MRIRSLKHKQLIALLLIALTPLFALTASMWMQAQNSKEQAVQTYQGYADTIAIALEKELD RQKERLEEVAVAAGLLFSSPDNADIRAFEQILYITSGRYSSSIAVNVSGQLLAYSSALTT DQAESIITNPSEHWFFRQTIRSGRTTLGEAKDSNSGAHVFIGTPVFSRSIYPRIDAVLIA KVDLQKLLETAADAYLPANASITLESSRSELASLGRKPHANAIALSAAMTNFPWKIEITA EQADIMTRPNLISLLGTLVVIFVSAISFLFGRAYIKTLKTFFDELSASIGILSQGKPLPA AVGNLERVSEAKGLLTQFREMADHVVKSDLALREANANLERRVKQRTADLERRNRELSAI NLLLSPIAQSPKDNGAPVFSMALERFGQAWDLDQIVIADGEHHCSSREVRQHYQTVTPLK DEKVLAVRSSYPMNPELQEALERFARFIDIVLDNKRLYIDISKQHAALTAALGGMAEGFV LFDKDAKVIFSNEKFRRFTSDSLQLNLDKSSREIFDFLNHLSPSSAAHESPSSAQNDVLE LIDKDAKRRHFHLSRLTVHLCGYDHHVFDGLAVLVRDITNEYEVSRLKDDVIGLVAHELN NPVATIRIGLETLIKRNSHLSPALRLQITENMASDALRLQNLITEWLNISRLNSGVLSCK MERLDVVGLISQQIDEWEKQTEMTVQRLYKFSPLYTMGDAARLRQVLRNLLDNALKYNNK TRPKISVSVKTMNADIIVDVQDNGMGIAAEDLEKIFERFYRSERARQQTQQGSGLGLAIC RAIVERFGGTLTIKDTALDIGSTFRVTLPILSEN >gi|319805896|gb|ADMF01000003.1| GENE 140 184945 - 186642 744 565 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 40 561 60 499 502 108 25.0 4e-23 MNHPAIARRSLLTAAGCALLRPAAASSGHERLQNKTYAADIIVIGFGAAGASAAIEAARA GSSVLILEKSPQKSHCSSTRMSSGIYLCPDRGISEEVLAQYIASTYLPDGGVSYREGKMD PDLTALARIWAKLGPQTYEWLHSLDPDFRQATSALFTTPRFMRLWEGYRPHLQGLIATYG RWKGFQHSTFGSPKLETSGGEALYACLNEGIRSASGISIRYAFQATELIADGDAVIGVRA VSENSEHQFLARQAVILTCGGFAFNRTMRASLLPASGNQFWAASSAPENTGDGINMALRA GAALIASCSYFDRFCALLPQKYNGIRLGVPLSCIGSPHSILVDNFGRRFTSESELRDQEQ HYGFYQELLQFDPATLSFPRAPVWLIFDHALMLNGPLATLGEGSTVSGLTTWSEDNLEAV RKGWILTGETITELAQRIARHPDNASRLSAEQLQKSITHFNRAAQSGFDEQFDRDPSTLE PIAQAPFYAMPVSIDVPHMGAGLKTDRNKQVLRWDNTPIEGLYAAGETAPVSQFVHDRGG HLSECLVFGRHVGRIAAAIPKRGRQ >gi|319805896|gb|ADMF01000003.1| GENE 141 186760 - 186996 66 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDGLGKSFPVRFMNVGGERTEASAMMTQILLSPIFRASDFTVNVKNSLPRFNLHQKISL LWKCVIRSEEIDSHWRTL >gi|319805896|gb|ADMF01000003.1| GENE 142 186995 - 188623 1394 542 aa, chain + ## HITS:1 COG:SMa0101 KEGG:ns NR:ns ## COG: SMa0101 COG1574 # Protein_GI_number: 16262503 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Sinorhizobium meliloti # 41 518 49 517 541 157 30.0 7e-38 MSRIHYKNLCAFPGRTGEPFLTEFTVEDGMFIADDSPAPDGTEIVTIDMRGAFVMPAFID AHAHPDGLAMTMGAAACTPPTVRSIPELQSALRKMAAKNPEGWIEGWGYDESLLAEGRTP LKGDLDQVSADRPVFIRRSDYHSAVVNSKALEMAGIDRNTPDPEGGAFGRDANGEPDGRL IELGAVRFLEAHAKPAKTFESAVESLLKLKDHYLSHGILTTTNMMVMRGSDPEPLTLYRE ACRRGLPVDFNLYAVWQGGEDSSGMPDFRADELRGPVRYAGIKLFADGSISGKTAAVRNP YKTAEGEKLDYPCGMMTLEEPVFLAALSYARRNGVQLSIHIMGDRSIDAVLDWLSDVDPW LADVPSVRLEHASLLRPDQLERIDQMRLKPAFTTQIIFPFAEWRSYRASLSDADFNAAYP VKSIAQRLDAFALSSDAPCTTWADPDSVFVSLAAAVTRRDADDGVFGPDEAVSVGTALAL YTGRAALVMPENGQIGVIEPGARANFIRLSGNPFMTAPSKLAELRVTGIWRDGAKLELPK AD >gi|319805896|gb|ADMF01000003.1| GENE 143 188896 - 190002 862 368 aa, chain + ## HITS:1 COG:ECU08g1900 KEGG:ns NR:ns ## COG: ECU08g1900 COG5271 # Protein_GI_number: 19173514 # Func_class: R General function prediction only # Function: AAA ATPase containing von Willebrand factor type A (vWA) domain # Organism: Encephalitozoon_cuniculi # 64 187 950 1074 2832 60 32.0 6e-09 MKQEIAAVPASRFGLHLSDEAHSAARGYVRDDLTREGALRVPELPRGWHFAPEAYDGIVG WWNWGGAEPLLITGPAGSGKTASVLAFCAVMQMPAVVFTARPRMDRRELIGRWVLGPSGM TWVDGPAALAWRNGWVLLINEFSAAPPEVWVSANDLLEGLPLEIDQTGEVIDRHPLARIV FTDNTRGHSTELAAGYFGRQIQDRSVIDRMWHLRCEGLHEADEARVLLASLEADLVVRAG EAAAEEICALAARAAAGSRCKAAQSPLGFENRSFALSIRAARRFAELTLRYAAGDLPVSA DPIAAAADTAVGNALDRPVRDALVTYLKTIFGERITELRQMRAESSAPVRRNPRSSRPKA CTETPALS >gi|319805896|gb|ADMF01000003.1| GENE 144 190153 - 192381 1303 742 aa, chain + ## HITS:1 COG:no KEGG:Ppro_0210 NR:ns ## KEGG: Ppro_0210 # Name: not_defined # Def: von Willebrand factor, type A # Organism: P.propionicus # Pathway: not_defined # 138 736 8 568 572 80 24.0 2e-13 MMTTDTVQFALPLDEDRPSNHIAARGCGPLAQPNAPAAQKRRFLPPAYTEARFGDPTTPE EAQLYAELNRLDGLRAKVKGAEKRRLAETFREVNAKAEKLFKGRRFWGAARPLLEHAAAE LGAGGPAAADTARIMAMLALPALCRRDGITVKFKGRPQTDGRTIWLGPIDFSHPAAPIYL FGHGVHERCHVVHTNFDAAGSEAHSDPRVSAFFNLFEDIRVDALGMAECRGYRFWREALF AVLCTTGKAAFAVNGTTKLPELFFGWMLGVLEAKVLNLKLPEGILVRADQLAREKLGGGL LDEALRFVMGRLPLANTAESLSLARDLVELLSDRMRMAKKTAQVESALLSAEDEARSSPR MGAASLQLSLFDNGSETASAAADNGFDSPAEDLAPAAEYAVLRRLLDPTGWVPASGSSPE GEASLNPRASSCDAEAGLEELLSAITAKSEEEFDPTAAEERYAEAFARDCEQASLANAGS MDGVSSSSHILRGYLSAEIETARRAFANVWPKTSDLGLQYAEALRRRVPVPMSGAASGWD ADDDLLERAVCGDDRIFLREGRAPACDAAVQILIDLSGSVGVEGGAIVRTAAVRLEEALK RTPGIHCRTAVFPDAAGRGPMLASEWETPPGGSRRVLASIPSRGPTPITQTLLWSLFSLG HRPEPTKLLILFTDGVFAADDCRAEEAALKLAGIETAAVLLNLHQTVPGRRLFEKETRVV RNAAEIPLALLDVLRDWRRRHP >gi|319805896|gb|ADMF01000003.1| GENE 145 192264 - 192536 63 90 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKKPEAWGLHKKSPAECLVIGSKGPKTGGIRTGCDEAKCQRGSPESAVSPHQGWRRRQS RSTSKSASGISAAFLTTRVSFSKSRRPGTV >gi|319805896|gb|ADMF01000003.1| GENE 146 192565 - 194832 727 755 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIHIPHFCTVNNRLKPGLMPQSSAAYESARDWRSAGGLFGEILLRCRPANPLTALRRHP EALARIEASLGRADFNAWGASVLTAFAADCAVWANEAFGQSLLACGLALMGDASAAAAAL PQPAGLNPVEIDVLRQARRRTVFLGALAAAWEPITEITVEAGQGRADRWEPLECWAPETE FLAEFVLRSVRSGRIVRGRCAEELSAQTFDLSTTRLKSETKRRALWSILARVRRAGSRSR ASETLWNAVTETNFDRRWEAALDQELLGLPACSDEGRLLARILIDARRRRLVGGAPKLPS EIFRMASSVEGRTLFSKAFTQRVAEGEVLPVDAAADEGSPKGFAVRQRRASPEESTDDSA EKPDESASAEAHRKPRLWWAADGWWLEWPLGGRLLAETAVDIYPAAEPFLLLNGHQQDER EEQFLRAAALFAAAEVLGLSASLPIKPQKLKLPNKPAALPLRSSRELVAAFLTAAAQSRL SPEQHQNRARAVKALSESPESEISGSGADSARTANELWAALDARLMRLAKAAQPIARALG PDGARGRHMAVNPAGFIPRPEVSAAKPPKNTEHEEGCALFCFEQADGTDADDDAFDSEHS QPKLRVMEEPQMPMPQLDDCEWIFGLGAEAGLAGDAVSAALEHLKDSGALTSEITTLNPP GVFLPESAFEDSFERLRAFLSASALLLRRTGANTGLAPWIWHRADKNGLVEAGLLLNPAA LTLVRRNPAGGTQRIEGESRRRLAAQGAEAQWIGM >gi|319805896|gb|ADMF01000003.1| GENE 147 194968 - 197118 1419 716 aa, chain + ## HITS:1 COG:no KEGG:Daro_2598 NR:ns ## KEGG: Daro_2598 # Name: not_defined # Def: hypothetical protein # Organism: D.aromatica # Pathway: not_defined # 93 685 75 634 635 435 45.0 1e-120 MTASAFALGLWSCGVLSGMPALVLGGIPAGLALKRITEAQRIWQERSRLSGHAPAFMSFA DLALVMRSFETPRLSPDEPRSAIRQTGMTRAAAIRLIGADPGTLFHAPAEAPVQSVWFGL GFRWTPVEAQRLYELTRIDWKSMLLPERWRHWFAQHPGLSDASPGIPVLHGVGPSPVCPP WQRGRIEEEPGIIRPLSSLGGGTLLVGTTQTGKGVVLTNLVSQAILRGDAVIVIDPKSSK RLRSAVIGACRAAGRPEPLEFHPAFPKRGVRLNPLGSYTRSTEIASRICAVLPRGGGAFT AFAWRAVFVMTEGMLFVGQPPTLRRFRAALERGIEELLEAALRKDLAKRVPFWEERLEAL ILQQSREIRVPMGAGGGTELAAMALLWERTAGSPGTKYCPGTPEAAVEGLLSVYRHSREH YAKITASLLPALSMLTAGALGESLSPEFDLSGKTDDSRPIVSLEDVISMQGVLYLGLDAL PDAETASALGALLLSDLSGAAGRRYNTEASGQEAVRTSLFVDETANVINPPLIEILNKGM EAGFQCVCAMQTISDLEARLGSAAQARMALGNLNNLIALRTKDEATQKFIAEVFGRTTIW ETAASVTTTAGASALPAFRAAASSSLSGRRDSVVPLEALGQLPNLEFFASLSGGRLWKGR MPILDPALEGLHLYAPVPKVPAPIGRLRAFLEARVKCLKSSRRHSDVTSMVKKERA >gi|319805896|gb|ADMF01000003.1| GENE 148 197120 - 197770 365 216 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRAFLGLWTAAMLLTAGFGAAGTSPERLIRVIYADAYGAAQVLDGRASLAAQWTEDALRA VWASGTQGLFPTTLGKGAHTRLPGWSGNDSRRAADPIRTSLSRAAASPYIENLRLMGLLA IRRTARMAVYFLLSGVFLIALFADGMLERRIAHHRMTGGRPSLFAGLGFVPGGLFIVSSV AALLPTVVSEWCFWVIPVLFGLAMRHMAARWHRLPR >gi|319805896|gb|ADMF01000003.1| GENE 149 197954 - 199078 1249 374 aa, chain + ## HITS:1 COG:lin0838 KEGG:ns NR:ns ## COG: lin0838 COG0620 # Protein_GI_number: 16799912 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Listeria innocua # 1 372 1 366 367 365 50.0 1e-101 MSQVNPPYRADVVGSFLRPKELLDARHAFQAGKLDRASLTALEDRLIKDLVEKEVKNGLK AVTDGEFRRSFWHLDFLAGLSGLHHVKAEHWSVHFEGFQPKAETVVIEDRIRFPKDHPFL EAYDRLKAIAGDTPIKYTIPSPSMLHLICAVRCETYKPIPFYAEHPDALFDDLAQTWTDA MLALYERGCRYLQFDDTSWGEFCSVEKRGAYAARGIDVDWVAKRYVEVINKILANKPADL TVTMHICRGNFRSTWFSSGGYEPVADILFSHCNVDGFFLEYDSDRSGSFEPLRFIKNQTV VLGLITSKFPELEDKDAVKARIEEATKYVPLNQLCLSPQCGFSSTEEGNIMTEDEQWAKV RLVCEIADEVWGDQ >gi|319805896|gb|ADMF01000003.1| GENE 150 199393 - 200160 792 255 aa, chain + ## HITS:1 COG:VC1940 KEGG:ns NR:ns ## COG: VC1940 COG0560 # Protein_GI_number: 15641942 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Vibrio cholerae # 12 232 2 220 220 143 34.0 3e-34 MAAFPLMLPGTSRPPKLVVFDLDHTLIACDATILWTEFLYEKKIVTDPIWRQYDRDMVKS YAKGVLDIRDFCRKHSGAFRSIPEEKLHALAQEFAKKKIAPLIFPDGKKWAKNALQANIP ACVLSASAAFIVKPIAKLFGLTDAMGIELAFKDGFCTGEIVGIPTFQEGKVERLSERLAE AGIGFEDVLFFTDSRNDLPLAERAGYTVCVNPDAVLESAARKNGWKVAEWKLSLRTQMTA QVDAKGVPETQTVRS >gi|319805896|gb|ADMF01000003.1| GENE 151 200935 - 203010 2055 691 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNRTFKVAKSLTRGVVVTSEKASSYQGKVVKTVVAAAVASFVAGAAMAADEPTPAPVAHP GVAIAMGADGVVGSLDEKYGTVSYNKTFNTLTVNASGFKTAEGATGYGALTNLYRVSSTD QSDKVGQTIQLVDSSFSNNSSNNAGGAVTLWLSENTDQHTITNTTFIGNSATDFGGAVSV MLWGSFSNPAGQVTLDGVTFANNKTTDEAGKGGAIYAEAASVTIKGNSSFSGNSAFQGGA IYVGDNASLTLNASENETITFSGNTLTQKDGKPIAGSAGSDLYLGKANGAGNEGTAATTE FTGLGTISFGGSIAGVEGSTITSSAANVSIADASEFLGSYELKEGTTKIAGAKYFGGTVT VNGGTLVTDDVVLVNNKTTVQDGAFKATSVTLGKAKAGSETADTNGKLINNGDSEIGTLA FATTGSSLEIGETGVLNLESVSYATGVDSVTVKNEGTINTSIANLITSETKDGKTTWTAT KLGKALADKDDTGSVNDTSYTGAFTAKQYTQLAQQIGNVNFRSATLVGEKGADGKVAAAT FEDAKLVGYAGNTDVVTEYGTAHPAVVAGDKDVTIKTLELVKKADATADAEDFHLNYVWA STTPYTAGEKTITIRGNGTEVFKGFTDKDGKALDIIANNTNFGEVAADGGTINNLVNFEN GTNEIVGDFKFTNLQVVKRSLKAQKRSRHFS >gi|319805896|gb|ADMF01000003.1| GENE 152 203095 - 203467 240 124 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEKLLSVS QYLV Prediction of potential genes in microbial genomes Time: Sun May 29 19:13:54 2011 Seq name: gi|319805821|gb|ADMF01000004.1| Sutterella wadsworthensis 3_1_45B cont1.4, whole genome shotgun sequence Length of sequence - 71693 bp Number of predicted genes - 71, with homology - 60 Number of transcription units - 30, operones - 13 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 483 327 ## Ppha_1041 transposase IS4 family protein + Term 513 - 558 3.7 - Term 560 - 607 9.6 2 2 Tu 1 . - CDS 632 - 2062 384 ## COG0582 Integrase - Prom 2184 - 2243 5.2 - TRNA 2237 - 2311 63.5 # Arg CCG 0 0 - Term 2190 - 2228 8.4 3 3 Tu 1 . - CDS 2327 - 4360 269 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 4476 - 4535 5.5 - Term 4585 - 4619 5.2 4 4 Tu 1 . - CDS 4668 - 5735 824 ## COG0407 Uroporphyrinogen-III decarboxylase - Prom 5765 - 5824 3.5 - Term 5768 - 5814 11.2 5 5 Tu 1 . - CDS 5846 - 6250 518 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 6315 - 6374 2.3 - Term 6324 - 6368 6.2 6 6 Op 1 42/0.000 - CDS 6393 - 6812 375 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 7 6 Op 2 42/0.000 - CDS 6879 - 8282 1652 ## COG0055 F0F1-type ATP synthase, beta subunit 8 6 Op 3 42/0.000 - CDS 8319 - 9200 1013 ## COG0224 F0F1-type ATP synthase, gamma subunit 9 6 Op 4 41/0.000 - CDS 9227 - 10768 1641 ## COG0056 F0F1-type ATP synthase, alpha subunit 10 6 Op 5 38/0.000 - CDS 10785 - 11336 603 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 11 6 Op 6 37/0.000 - CDS 11339 - 11809 554 ## COG0711 F0F1-type ATP synthase, subunit b 12 6 Op 7 40/0.000 - CDS 11908 - 12150 432 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 13 6 Op 8 . - CDS 12218 - 13048 830 ## COG0356 F0F1-type ATP synthase, subunit a 14 6 Op 9 . - CDS 13061 - 13426 291 ## - Prom 13457 - 13516 4.8 15 7 Op 1 25/0.000 - CDS 13541 - 14407 666 ## COG1475 Predicted transcriptional regulators 16 7 Op 2 . - CDS 14416 - 15189 415 ## COG1192 ATPases involved in chromosome partitioning 17 7 Op 3 . - CDS 15261 - 15923 540 ## COG2095 Multiple antibiotic transporter 18 7 Op 4 24/0.000 - CDS 15929 - 16573 547 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 19 7 Op 5 11/0.000 - CDS 16578 - 18521 650 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 20 7 Op 6 . - CDS 18551 - 19939 624 ## COG0486 Predicted GTPase - Prom 20172 - 20231 2.5 21 8 Tu 1 . + CDS 20031 - 20348 201 ## + Term 20356 - 20412 5.1 - Term 20347 - 20397 2.2 22 9 Tu 1 . - CDS 20448 - 22145 1587 ## COG0706 Preprotein translocase subunit YidC - Prom 22255 - 22314 4.3 - Term 22210 - 22260 2.5 23 10 Tu 1 . - CDS 22465 - 22659 118 ## - Prom 22864 - 22923 2.7 24 11 Tu 1 . + CDS 22666 - 23220 271 ## - Term 22793 - 22843 6.3 25 12 Tu 1 . - CDS 22951 - 23091 171 ## PROTEIN SUPPORTED gi|124269012|ref|YP_001023016.1| 50S ribosomal protein L34P + Prom 23289 - 23348 1.5 26 13 Op 1 . + CDS 23404 - 23634 127 ## 27 13 Op 2 16/0.000 + CDS 23619 - 25064 832 ## COG0593 ATPase involved in DNA replication initiation 28 13 Op 3 5/0.000 + CDS 25103 - 26221 623 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 29 13 Op 4 . + CDS 26319 - 28868 1409 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 28877 - 28915 9.1 30 14 Tu 1 . + CDS 28935 - 29879 378 ## tlr1272 5'-nucleotidase + Term 30069 - 30118 1.4 + Prom 30229 - 30288 3.2 31 15 Op 1 . + CDS 30317 - 31114 100 ## 32 15 Op 2 . + CDS 31172 - 31825 525 ## COG2823 Predicted periplasmic or secreted lipoprotein + Term 31869 - 31908 -0.9 33 16 Op 1 . - CDS 31927 - 32904 492 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 34 16 Op 2 9/0.000 - CDS 32917 - 33321 438 ## COG2921 Uncharacterized conserved protein 35 16 Op 3 . - CDS 33332 - 34450 544 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 34513 - 34572 3.0 36 17 Op 1 . + CDS 35136 - 35390 113 ## 37 17 Op 2 . + CDS 35403 - 36185 402 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 38 18 Tu 1 . + CDS 36638 - 36994 145 ## + Term 37038 - 37068 0.2 39 19 Op 1 . - CDS 36996 - 37439 156 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 40 19 Op 2 . - CDS 37444 - 37659 130 ## 41 19 Op 3 . - CDS 37659 - 39068 922 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Term 39081 - 39108 1.5 42 20 Op 1 8/0.000 - CDS 39145 - 40026 360 ## PROTEIN SUPPORTED gi|154175501|ref|YP_001407903.1| 30S ribosomal protein S16 (BS17) 43 20 Op 2 19/0.000 - CDS 40051 - 41160 734 ## COG0772 Bacterial cell division membrane protein 44 20 Op 3 3/0.143 - CDS 41157 - 43076 878 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 45 20 Op 4 19/0.000 - CDS 43098 - 43619 382 ## COG2891 Cell shape-determining protein 46 20 Op 5 22/0.000 - CDS 43616 - 44545 481 ## COG1792 Cell shape-determining protein 47 20 Op 6 . - CDS 44569 - 45612 804 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 45843 - 45902 1.6 + Prom 45665 - 45724 2.6 48 21 Op 1 31/0.000 + CDS 45853 - 46140 386 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 49 21 Op 2 21/0.000 + CDS 46159 - 47613 1241 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 50 21 Op 3 . + CDS 47649 - 49100 912 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 49122 - 49169 13.2 - Term 49110 - 49156 9.0 51 22 Tu 1 . - CDS 49197 - 49874 568 ## COG0461 Orotate phosphoribosyltransferase - Prom 49973 - 50032 5.1 + Prom 49851 - 49910 1.7 52 23 Op 1 . + CDS 49997 - 50788 212 ## COG0708 Exonuclease III 53 23 Op 2 8/0.000 + CDS 50785 - 51492 485 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 54 23 Op 3 . + CDS 51504 - 52820 453 ## COG0477 Permeases of the major facilitator superfamily 55 24 Op 1 . - CDS 52850 - 53563 481 ## Mpe_A3702 SecA-related metal-binding protein 56 24 Op 2 25/0.000 - CDS 53574 - 55610 889 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 57 24 Op 3 9/0.000 - CDS 55628 - 55897 205 ## COG1925 Phosphotransferase system, HPr-related proteins 58 24 Op 4 . - CDS 55890 - 56315 186 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 56349 - 56408 4.8 + Prom 56349 - 56408 3.5 59 25 Tu 1 . + CDS 56449 - 56838 262 ## - Term 56831 - 56877 7.1 60 26 Op 1 17/0.000 - CDS 56903 - 58366 1086 ## COG0168 Trk-type K+ transport systems, membrane components 61 26 Op 2 3/0.143 - CDS 58378 - 59793 945 ## COG0569 K+ transport systems, NAD-binding component 62 26 Op 3 8/0.000 - CDS 59809 - 60669 544 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 63 26 Op 4 . - CDS 60666 - 62978 1186 ## COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 64 26 Op 5 . - CDS 62983 - 63591 348 ## RALTA_A3151 conserved hypothetical protein, proline rich; putative membrane anchored protein 65 26 Op 6 20/0.000 - CDS 63608 - 64978 443 ## COG0144 tRNA and rRNA cytosine-C5-methylases 66 26 Op 7 . - CDS 64975 - 65934 440 ## COG0223 Methionyl-tRNA formyltransferase - Prom 65965 - 66024 4.3 67 27 Tu 1 . + CDS 65993 - 66916 363 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 66961 - 67002 3.0 68 28 Tu 1 . - CDS 66928 - 67467 351 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 67520 - 67579 3.2 + Prom 67479 - 67538 5.4 69 29 Op 1 13/0.000 + CDS 67566 - 68486 176 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 70 29 Op 2 . + CDS 68599 - 71187 1507 ## COG0550 Topoisomerase IA + Term 71302 - 71348 5.1 + Prom 71303 - 71362 7.8 71 30 Tu 1 . + CDS 71395 - 71692 229 ## Predicted protein(s) >gi|319805821|gb|ADMF01000004.1| GENE 1 1 - 483 327 160 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 153 414 564 570 116 39.0 2e-25 AILAAQKDFGIFIILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVR GKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLL DWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD >gi|319805821|gb|ADMF01000004.1| GENE 2 632 - 2062 384 476 aa, chain - ## HITS:1 COG:mll0487 KEGG:ns NR:ns ## COG: mll0487 COG0582 # Protein_GI_number: 13470710 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 78 466 63 397 402 112 25.0 2e-24 MPRRAQDLTPLGIQKELKAFAASGKKTKALTDGKTPCLRLEMTIGASGVNARWTYKKQKT NTADGFNLGLGAYPGVTLRDARCKAEAIAEQIAAGLNPKEERERQERAEVEAKALAESEM RWRTPFRTVADEWIEAKENEGLWAHDARGADKARSYLRNWILPVLGDMAINDVDRSACIQ LVRYRDMGTRQDTDAKCRRLVNQICIYAHEKGYRQSDEAPANKNDPVFKEECKPLMRRRK EKGHFGALPPEDMPEFMAQLKRMPGVGARALEFMILTAGRQDSIYHEILGKQVLGLRWEH LDLDRGIWHQPLESNKMKRPEGVDLVLSSYAIQLLRTLPRSAEVPFVFADLRRSKPRSIS KATMAKTINDMNKVRERAGLPLWLDPQKSKKEGKPRHVTPHGMRACLRTWTELTAHGNYA RFNPNIVERCLDHAAKDRFGGAYYRQGLSADDEAHEREIMEAWGRYCIEGKWPDED >gi|319805821|gb|ADMF01000004.1| GENE 3 2327 - 4360 269 677 aa, chain - ## HITS:1 COG:RSc3302 KEGG:ns NR:ns ## COG: RSc3302 COG1198 # Protein_GI_number: 17548019 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Ralstonia solanacearum # 163 674 245 765 768 508 54.0 1e-143 MAIKIGLFAKVLVDVPGLPPLDYRIPDDLLVAVGDLVVVPLGSRRVVGVVATLANAADCE DKRLKCISAVLHATAPLNAEWLALTKFAAIYYLRGWGEAALPAIPTALRRMPTPQQEKRI AKIRDAMPIPDTSQESAIEVPTLNAEQRAAVSAVLSMSGFQAWLLFGVTGSGKTEVYLHL IKSILERDPESQVLLLVPEINLTPQLVGRVKRRFPHEAVAALNSEYTDNQRASAWLGVKE GRSRILVGTRMAIFAEFRKLALILVDEEHDLSYKASDGLRYSARDLAVWRASKLECPVVL GSATPSLESWCRMKTGGYKLLSLTHRAVNRAELPEVKLISPPIKGSTRMVSDAAATAIEA CLTSGRQVLVFLNRRGYAPVLSCPACGWVSACPHCSVFMVYHKREKALICHHCGARHSVP EACPSCGNVDILPRGTGTERIEEELGLLFPERTVLRIDRDSAAKKHAAEEAFQKVHRGEV DILVGTQMVAKGHDFQRVGLVVVLNPDAQILSPSVRAKERLFFTLMQVAGRAGRAGDRGE VLIQTRFPEEPLFAALAAQDYPMFADETLEERRESGCVPFVYQALLTVEAEHLSEAISFL EQAATIASQLAPPEVFIYDPVPMALVKVMNRERAQLLVESSVRPILHRFLTVWNQALKTV PRSSSASVCLEVDPSET >gi|319805821|gb|ADMF01000004.1| GENE 4 4668 - 5735 824 355 aa, chain - ## HITS:1 COG:NMB0781 KEGG:ns NR:ns ## COG: NMB0781 COG0407 # Protein_GI_number: 15676679 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Neisseria meningitidis MC58 # 1 354 2 352 354 466 63.0 1e-131 MTLHNDTFLRALMREHTDFTPVWLMRQAGRYLPEYCATRSKAGSFMGLAKNPDYATEVTL QPIDRYGIDAAILFSDILTVPDAMGLGLSFVQGEGPVFAHPVQDEAAVKALAVPDIEDKL GYVTAAVRSIRRALDNRVPLIGFSGSPFTLACYMVEGRGSRDFRTAKTMMFRRPDLFERI LDINADAVADYLNAQIAAGAQAVQIFDTWGGMLADGDFQRFSLAATKKVVSRLTREADGA KVPVIVFTKGGGEWIEEIAACGCDAVGLDWTTNLARARRVTEDRVALQGNMDPLALFGDE KTIRSEVRRVIDAFGPVGMGGHVFNLGHGINQFTPIENVQILVDEVHEYSRHQHI >gi|319805821|gb|ADMF01000004.1| GENE 5 5846 - 6250 518 134 aa, chain - ## HITS:1 COG:BMEII0245 KEGG:ns NR:ns ## COG: BMEII0245 COG0589 # Protein_GI_number: 17988589 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Brucella melitensis # 6 134 5 148 148 62 32.0 3e-10 MSAVKILVTTDGSNLSDKAVDTAIELAEQVGGSVVGMTVVLSAAPAGGFTEEEPIVKERL EAISHKAAEKQVPCEVVVEHAETVSQGVLACAARVNATYIVMASRGLGTFGALLLGSETQ KVLSQADRPVLVVR >gi|319805821|gb|ADMF01000004.1| GENE 6 6393 - 6812 375 139 aa, chain - ## HITS:1 COG:RSc3316 KEGG:ns NR:ns ## COG: RSc3316 COG0355 # Protein_GI_number: 17548033 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Ralstonia solanacearum # 1 138 1 136 137 129 57.0 1e-30 MATIKVDVVSAEEHIFSGEAELVSLPGTSGELGIMPGHLPLITLIRPGFVRVHVPGEQEP EQIFVAGGVLEVQPEQVTVLSDTAVRSKDLDEARAKEALAAAEAARASATGSIEIARIEA EIAALAAELAVIRKLRSKL >gi|319805821|gb|ADMF01000004.1| GENE 7 6879 - 8282 1652 467 aa, chain - ## HITS:1 COG:RSc3317 KEGG:ns NR:ns ## COG: RSc3317 COG0055 # Protein_GI_number: 17548034 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Ralstonia solanacearum # 1 467 1 467 467 800 86.0 0 MSIGQIVQVIGAVVDIEFPRDAMPKIYEALVLKNDEADSLAENGLTFEVEQQLGDGVVRT IAMGTSEGLRRGMKVETTGREISVPVGPKTLGRIMDVLGRPIDDCGPIGSEEIRPIHNVA PKFDELSPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQYGGY SVFAGVGERTREGNDFYHEMGESKVLDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDE GRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERIASTKTGSITSI QAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQVDPNIIGLEH YTVARRVQETLQRYKELRDIIAILGMDELAPEDKLVVQRARKIQNYLSQPFHVAEVFTGA PGKYVPLKETIRGFKMIVDGECDELPEQAFYMVGTIDEAFEKAKTLK >gi|319805821|gb|ADMF01000004.1| GENE 8 8319 - 9200 1013 293 aa, chain - ## HITS:1 COG:RSc3318 KEGG:ns NR:ns ## COG: RSc3318 COG0224 # Protein_GI_number: 17548035 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Ralstonia solanacearum # 1 292 1 291 291 357 65.0 2e-98 MPSTKEIRGKIKSVQNTRKITKAMEMVAASKMRKAQDRMHAARPYGDKIRVICSHLARAN VTDYSHPFLTSPEGAKKVGIILVSTDKGLAGALNTNIQRMLLQRFRDWSAEGVQVEASAL GNKGLGFLQRIGVPVISQAVQLGDRPSLDRLIGAIQVQIEAFKEHKVDKVYLCYTRFVNA MKQIPVIEQLLPLTDEHLSADEPQRKFSWDYIYEPDAQTVLDELLRRYVEALIYQAVAEN MASEQSARMVAMKAASDNAKKLIDDLQLVYNKTRQAGITKEITEIVGGAAAVS >gi|319805821|gb|ADMF01000004.1| GENE 9 9227 - 10768 1641 513 aa, chain - ## HITS:1 COG:RSc3319 KEGG:ns NR:ns ## COG: RSc3319 COG0056 # Protein_GI_number: 17548036 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Ralstonia solanacearum # 1 512 1 512 513 793 80.0 0 MQLNPSEISELLKKRIEGLGVSADLRTQGTVVSLSDGIARIHGLSDVMQGEMLEFPGEVY GLALNLERDSVGAVILGEYEGISEGDTVKTTGRILSVPVGEELIGRVVNALGQPIDGKGP INAKAFDVVEKVAPGVIDRKSVSQPVQTGLKSIDSMVPIGRGQRELIIGDRQTGKTAVAI DTIINQKGKDLICVYVAIGQKASTIANVVAKLEEHGAMDYTIVVAATASESAAMQYLAPY AGATMGEYFRDRGQDSLIVYDDLTKQAWAYRQISLLLRRPPGREAYPGDVFYLHSRLLER AARVNAEYVEKFTKGEIKGKTGSMTALPIIETQAGDVTAFVPTNVISITDGQIFLETDLF NAGIRPAINPGISVSRVGGAAQTKVIKKLGGGVRLALAQYRALAAFAQFASDLDEVTRKQ LERGRMVTELMKQPQYQPLQVWEEALVLYAVNNGYYDDVAVADAMRVERAMREYLKAHYA DLVNSIESRKELSKEDEASLKGAIAEFKKNGAI >gi|319805821|gb|ADMF01000004.1| GENE 10 10785 - 11336 603 183 aa, chain - ## HITS:1 COG:RSc3320 KEGG:ns NR:ns ## COG: RSc3320 COG0712 # Protein_GI_number: 17548037 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Ralstonia solanacearum # 1 183 1 177 178 130 45.0 2e-30 MAELSTIARPYAVGLMEALQERKASAQDMSAVLDAVSRLAETAVDPQIGQLEGDPGLTDD QFYDIFASVVGADQPDEVKNLLRVVIQNGRVDALPEIARQFRILKNESEGVADALIETAF PLSDAELKDLLEALAKKFPGVKLHPVVSVEKALIGGVRVHVGDKLLDASILARLNQMKTA LTA >gi|319805821|gb|ADMF01000004.1| GENE 11 11339 - 11809 554 156 aa, chain - ## HITS:1 COG:RSc3321 KEGG:ns NR:ns ## COG: RSc3321 COG0711 # Protein_GI_number: 17548038 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Ralstonia solanacearum # 1 156 1 156 156 116 55.0 2e-26 MNINASLFVQMVVFLLGAWVTMKYIWPPLIHAIEERQKKIADGLAAANKGEKALAVATEQ GQAIEAAARARASTIVADGEKRALAIVEDAKAQAQVEADRIIESAKAEADVQVQRARDQL RDQVADLAVQGAEQILAREVDKTVHAQLLDQLKAKL >gi|319805821|gb|ADMF01000004.1| GENE 12 11908 - 12150 432 80 aa, chain - ## HITS:1 COG:NMA0514 KEGG:ns NR:ns ## COG: NMA0514 COG0636 # Protein_GI_number: 15793512 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Neisseria meningitidis Z2491 # 4 80 1 77 78 86 74.0 1e-17 MTNVALVAIACGIIIGLGALGACLGIALMGSKYLEASARQPELMEPLQTKMFLLAGLIDA AFLIGVGIAMMFAFANPFVG >gi|319805821|gb|ADMF01000004.1| GENE 13 12218 - 13048 830 276 aa, chain - ## HITS:1 COG:RSc3323 KEGG:ns NR:ns ## COG: RSc3323 COG0356 # Protein_GI_number: 17548040 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Ralstonia solanacearum # 6 276 33 307 307 268 57.0 6e-72 MSIENPSATEYIQHHMQHLQSLHQQVIVDFSVFNYDTLFFSILSLLVVFFVLRLGAKKAT SGVPGKMQCAVEMLVEMVNNQAKSIVHGDRTYIAPLALTVFCWVTIMNCIDLIPVDFFPW LAGLIGINHLRPLPTADLNGTLGLSFGVLCLLFYYGIKVKGFSGFIIELFTAPFGKFPLL WPVNLLMNIIEYLAKFVSLGMRLFGNMYAGELVFFLIALLGGYMLEFGLFGGAAAGIGQV IAGLVWWLFHVLIVLLQAFIFMMLTLVYIGQAHSSH >gi|319805821|gb|ADMF01000004.1| GENE 14 13061 - 13426 291 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFALSDMMRVVLAQYVVTLIAALFCTAVFGTDPGLSAFLGGFYYAAATTLHALILLGVKK LGCGVGANVVTLLFGEFVKVLCVILLLFITAQLYANLNWPALIISLMAVANSYFILLFKK R >gi|319805821|gb|ADMF01000004.1| GENE 15 13541 - 14407 666 288 aa, chain - ## HITS:1 COG:RSc3325 KEGG:ns NR:ns ## COG: RSc3325 COG1475 # Protein_GI_number: 17548042 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 4 287 5 294 303 233 49.0 3e-61 MPKKKGGLGRGLDVFFGDDDHPGILEDDKSAKFIEVPITEVRAGRYQPRTQMDEAALADL AASIREQGVLSPILVRPLEAGGYEVLAGERRLRAAKIAGMETVPVILRSVSDENALVIGL IENIQRENLNPIEEAQGLQRLIDEFAFTHEAAAKAVGRSRPAASNLLRLLTLSDEVKRMV MEGELEMGHARALLGLEGAEQAAAAKQVAAKHLSVRQTEDLVRRLLEGVQPKKKVVIKTR DNERLEEALADTLGAVVKLSANQKGKGRIVIEFSSLDQLQGIVDRIQN >gi|319805821|gb|ADMF01000004.1| GENE 16 14416 - 15189 415 257 aa, chain - ## HITS:1 COG:RSc3326 KEGG:ns NR:ns ## COG: RSc3326 COG1192 # Protein_GI_number: 17548043 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Ralstonia solanacearum # 1 253 1 253 261 353 66.0 1e-97 MAHIFCIANQKGGVGKTTTAVNLAAALALRGQRVLFVDLDPQGNGTMGCGIDKHDVECSV YQLLLGLKSFKDVVRHSESGGFDVLPANRELSGAEIELISVRERDQRLKKTLAPLLTNYD FVLIDCPPSLSMLTMNALCCAEGVIVPMQCEYFALEGLTDLVGSIRRVHAEKNPGLKIIS ILRVMFDPRLTLQQQVSEQLKNYFGDKVFNTIIPRNVRLAEAPSYGKPGVVYEPSSRGAL AYKAFADELLKRLGAPV >gi|319805821|gb|ADMF01000004.1| GENE 17 15261 - 15923 540 220 aa, chain - ## HITS:1 COG:CC1662 KEGG:ns NR:ns ## COG: CC1662 COG2095 # Protein_GI_number: 16125908 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Caulobacter vibrioides # 1 214 1 218 228 112 34.0 5e-25 MDLTAMLGASFVGAFLYAFTTLLPVINPFSGAMFFVTLTGHLSDTDRSYVAGRIAVFSLI ILMVCLFAGHIILGFFGISVGVLRCAGGIVLFAAGWNALNAPAQDGTSSPKMELPRSRLK AMAFYPFTLPLTTGPGAIAVTVAIGTTLPYNFSNLAGTILAILAVVAVIWLCFRYGDRVS RAVGAAGADALARIFAFILICLGVAVFWQGFTELWLNLGK >gi|319805821|gb|ADMF01000004.1| GENE 18 15929 - 16573 547 214 aa, chain - ## HITS:1 COG:NMB0190 KEGG:ns NR:ns ## COG: NMB0190 COG0357 # Protein_GI_number: 15676117 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Neisseria meningitidis MC58 # 11 213 7 206 207 179 47.0 4e-45 MSATVIDRSVLTAGLTQLGLSSNLDVLKGFESYAELLLKWNKVYNLTAIRNPEEVLTHHL LDSATLVPALQRFVPGVDAVLDVGCGGGLPSVPLALLLPHLSVTGVDAVGKKAAFVNQAA IELGLKNLTARHARVEKMVGTWKAITSRAFASLADFTHLTMHLLASDGRWLAMKGVVPED EIAALPSNVKVLAIEKLIVPGLEEERHLIVLGKE >gi|319805821|gb|ADMF01000004.1| GENE 19 16578 - 18521 650 647 aa, chain - ## HITS:1 COG:RSc3328 KEGG:ns NR:ns ## COG: RSc3328 COG0445 # Protein_GI_number: 17548045 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Ralstonia solanacearum # 1 628 1 631 647 836 65.0 0 MDYPENFDVIVIGCGHAGAEAALASARMGCSTLLVTHNLDTVGQLSCNPSIGGIGKGHLV KELDALGGTMGQVTDESGIQFRILNRSKGAAVHASRAQIDRQLYRRAMRKRIESQENLKV FQMAVDDLLVENGCARGVVTNTGIRFHSKAVVLSAGTFLNGLVHIGLEHFTAGRMGDPAS VRLGERLKELGLPQGRLKTGTPCRIDARTIDFSRCEIQWGDLNPTPSFSLMQPTATHPEQ MPCWITHTTREMHELILANLDRSPMYAGVIQGIGPRYCPSIEDKVKRFAEKDSHQVFLEP EGIHVREYYPNGISTSLPFDVQLKMVHMMPGLEKAHLTRPGYAIEYDYYDPRELKRSFES KVMEGLFCAGQINGTTGYEEAAAQGLLAGANAALYARGDDAWTPRRDEAYLGVMADDLTT KGVTEPYRMFTSRAEYRLNLREDNADTRLTPIGRKLGLVDDARWEFFCRKTERIERAMEA LRETWVNPKLIERAEAERVLGVAIEREYSLRSLLARPNVTMESLMTLKRTDGSLAHDFSE LNKEEQSRVEVEVKYAGYIDRQKDEIQKTLANETLVIPREMDYDQVMGLSFEVRQKLKAA QPETVGQASRISGVTPAAVALLLVHLKRRHYYVRDKGTQHPTVESPE >gi|319805821|gb|ADMF01000004.1| GENE 20 18551 - 19939 624 462 aa, chain - ## HITS:1 COG:RSc0005 KEGG:ns NR:ns ## COG: RSc0005 COG0486 # Protein_GI_number: 17544724 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Ralstonia solanacearum # 8 462 25 481 481 378 50.0 1e-104 MLFNDKTPIIAIATAPGRGGIGVIRLSFEADLADPILAALFPQRSIEPRRVQLLPFLDEN NALLDHAVVLYFSAPASYTGESVLEIQAHGGPVLLKLILRAALTKLAFCGLRIAEPGEFT KRAFLNGRMDLTQAEAVSGLIDAASEAAAHAAARSLSGDFSREVHAAGDLLDEARALSEA SLDFPEEDLEDLKEKQIFTRAREAQIKLEGLLANARRGVVLADGITVALVGAPNVGKSSL LNALAGDEVAIVTEIAGTTRDRIEHWTAFDGIPLRIVDTAGMRETNDIVEQKGIERTLKA ISEADIVLHLVDASGRIPDDEALLTRVREYARPGTPLLIVANKIDSISLERRNEYCDDAS IVPISAKTHEGLEALKARVLEYVDMAGGTEGVFLARERHLECLRMASAHLSTALEMSTSP FCMMEIFAEELRLAGRALGELLGETDAEDLLGIIFSRFCIGK >gi|319805821|gb|ADMF01000004.1| GENE 21 20031 - 20348 201 105 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFQGPHNQPNQFFGPALAGACIAVVLSVPAAALTAAVFGSTYKIRALIYCTFLLWAVIG AILVYLKTWKAEKQPLSLRLILLWFLSVWMWPLLFAASIWTKRKH >gi|319805821|gb|ADMF01000004.1| GENE 22 20448 - 22145 1587 565 aa, chain - ## HITS:1 COG:RSc0004 KEGG:ns NR:ns ## COG: RSc0004 COG0706 # Protein_GI_number: 17544723 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Ralstonia solanacearum # 4 564 2 553 553 500 45.0 1e-141 MGREVQRALLWVILFGSLFMLWDNYQVWKGGESFFGSVKQEAIEADRSAAAGVPTATVAK TAPALDDATAVKEPIVVTTDRMKVTFDRMGARIVGSEMLLFPQQADWTEVGLAGMVLGRE PSPNLGNVKLFDVEGGHAYLAQTGLVGGDYPTHNDEFKLVSQDLALGDKESMKVVFEADK GGLKVTKTFTFKRGYYGIDVDTAVTNTTDKAVTPQIYYQLTRDSSKPAGESSMYSTFTGP AFYTDEENFQKLSFSEIRDKDAKYVEDTNNGWLAMVQHHFVSAWVPPQGEVRHNYTRALG HDLFAVGTLISLKEIAPGATQTNHAVLYSGPQEQARLEQLAPGLELVVDYGWLTFLAKPI YWLLDFLYGIVGNWGWAIVLLTCIVKAVLYPISAAGYRSMARMKEVTPRLKALQEKYKDD KQRLNQAMMELYKTEKINPVGGCLPIMLQIPVFLALYWVLQGSVELRGAEWILWVHDLAM PDPWFVLPALMAATMFLQILLNPKPTDPMQAKVMYIMPVVFSVMFFIFAAGLVLYWLTNN ILSIAQQWWINKTIAEERAQRLAKR >gi|319805821|gb|ADMF01000004.1| GENE 23 22465 - 22659 118 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLRQVLPDGVGLDVSLRLKVPLKGLSPKSRTDLKRRLRADADGLLNEVVRRSKRRTQAKA EQQA >gi|319805821|gb|ADMF01000004.1| GENE 24 22666 - 23220 271 184 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METKYFPQLTFNYGTVNRQRRVLLSNGDPDTHNPGLLIFKTAGDKTCGMDAKRMFVPRPQ YHPEIFCTYDTKSSRESEVLRLASGHDGNQPWADRLEGENVTALSTTASKDTTAALRAAA NKKTVRASALGLGGLVGTLSSHDYSLMSGESLQTGEKPYFCGRRIQSCEETQRFCAFLFV SNGP >gi|319805821|gb|ADMF01000004.1| GENE 25 22951 - 23091 171 46 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|124269012|ref|YP_001023016.1| 50S ribosomal protein L34P [Methylibium petroleiphilum PM1] # 4 46 2 44 44 70 79 2e-11 MATKRTYQPSKTKRARTHGFLVRSRTKGGRRVLARRRAKGRHVLAL >gi|319805821|gb|ADMF01000004.1| GENE 26 23404 - 23634 127 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSHSTVPCAYSIYVNIHFCKFNCNSRFYYSQINVDKDEFTLTTEVIVDNFILKKHIINKN NNRDSLFIVEELWKKR >gi|319805821|gb|ADMF01000004.1| GENE 27 23619 - 25064 832 481 aa, chain + ## HITS:1 COG:RSc3442 KEGG:ns NR:ns ## COG: RSc3442 COG0593 # Protein_GI_number: 17548159 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Ralstonia solanacearum # 106 481 157 522 522 392 55.0 1e-109 MEKTLKWNAFPYEEPSWHLNISAPISVMQAFWQQCLESLKRLTQNTPKIYTTWFEVLKPT YWNEKDGILTLEAPATKITYIRGAYQKSISAVATRIHGSAVAVSLVPAQVKPVQREESGT SHPPSETEIKRREETGLLPGLTFENYVNGNANQLAVAAAEHVATTTGTQYNPLYIYGGVG LGKTHLMQAIGHRYLDLHPKARVRCVSAQDFINEYTSAVRESTNKTHASLEKFDERYRSL DLLLIDDVQSLSGAKGSQGQFFRAFEALVPHNKQLVITSDTYTRGLKDIEPRLISRLSQG LSVAIEPPEFEMRTAILLNKAKTMGVDLPDEVAAYIAKRLKSNVRELEGALQQVVAYQQF QATSSREITIDIAKRVLREQFQVVNSLITIENIQKTVADYYKIKVADMHSKRRPANIARP RQIAMYLTKELTQHSLPEIGENFGGRDHTTVMHAVRKITQERQNDAELNHEIHVLEQMIR G >gi|319805821|gb|ADMF01000004.1| GENE 28 25103 - 26221 623 372 aa, chain + ## HITS:1 COG:RSc3441 KEGG:ns NR:ns ## COG: RSc3441 COG0592 # Protein_GI_number: 17548158 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Ralstonia solanacearum # 1 372 1 371 371 291 41.0 1e-78 MKLISSPVEALIKPVRSVAGIVERNQSLPVVSNILIEQKGVDVTFSTTDLDIQIRTSASV GVEGCEGSITLNAQKFSEILGALRPLDTLDVDIDDGGLADLTTSGGHFSMQTLPAQDFPV LKIMPWTTTFTLPAKTLRYLLTMTAFAMAPKDIRYFLMGVLFVVEGAKLIAVATDTHRLA YCEAEIDGLNQETKIEAIVPRKTVRELLRILPEDDTPVTVNVGDTQIGFNFAGIEFVSKL IEGKFPDYQRVMPTLDTNPQCVSINREELLLALRRVQILTNERFHGIRWLFTKGSLTVQG SNAEQEEASQKLAVNWEWDDLDIGFNLLYMIELLNNLKNSEVNFHFAATPKSVLVTMPES SSFRYLIMPMRI >gi|319805821|gb|ADMF01000004.1| GENE 29 26319 - 28868 1409 849 aa, chain + ## HITS:1 COG:RSc3440 KEGG:ns NR:ns ## COG: RSc3440 COG0187 # Protein_GI_number: 17548157 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Ralstonia solanacearum # 22 848 3 841 842 902 58.0 0 MTEAENSSNQAPQPLPQVQSLDEVQPDQNPNAYNAASIQILEGLEAVRKRPGMYIGDTAD GSGLHHLVYEVVDNSIDEALAGFASHIEVTIHTDNSISVTDDGRGIPTAIKWDDKHDPKR SAAEIALTELHAGGKFDNNGYKISGGLHGVGVSCVNALSTWLRLVVRRDGEARSLEFRRG KVVNRLIENAIDPATGKSVRISPMTLLGPTNRRGTEVHFLPDLEIFEQVTEFSYETLLSR LRELSFLNSGVFITLKDLRTSHEAQLKTDKGLIAYVEYKNQSRTVLHPKIFHAKETVLSN GSPVEVEVAMQWQDSYNESLTAYTNNIPQRDGGTHVTGLRGAMTRVLKNYIAKNELAKKS KVDPDGDDMREGLTCVLSVKIPQPKFSSQTKDKLVSSEVRPAVEDVVSRELELYLEQNPT DAKLICEKIITAARAREAARKARDLTRKTGMGGGLPGKLADCREKNPAYSELFLVEGDSA GGSAKQGRNSQYQAILPLRGKVLNVEKAAQDKLLDSEQIRMLTLALGTNIGKLFDIEKLR YHRIIIMTDADVDGAHIRTLLLTLFFRQMPELIENGYVYIAQPPLYKVQKNSKDKGRFLK DEAEMNAYLKDLALSGAALYPSTNAEEPIRGTALETLVGEYLQANAVISRLGGAIDRAVL LAIAAGVELSLENTFAAQQSAERLEKEMRDPNVKIEAYWNEEEEKHVLKIHRTRHGNIKT TTLLPEFLLSADYQKLRESSLMLQGVIQEGAEIERGGEREPVKNFAEAVGWLMRQAEKGL IRQRYKGLGEMTPEQLRDTTMDPAVRRMLRVRIEDAANADAIFSMLMGDVVEPRRAFIES NALFGNIDA >gi|319805821|gb|ADMF01000004.1| GENE 30 28935 - 29879 378 314 aa, chain + ## HITS:1 COG:no KEGG:tlr1272 NR:ns ## KEGG: tlr1272 # Name: not_defined # Def: 5'-nucleotidase # Organism: T.elongatus # Pathway: Purine metabolism [PATH:tel00230]; Pyrimidine metabolism [PATH:tel00240]; Nicotinate and nicotinamide metabolism [PATH:tel00760]; Metabolic pathways [PATH:tel01100]; Biosynthesis of secondary metabolites [PATH:tel01110] # 7 308 19 318 319 291 50.0 3e-77 MSITADQLVVAVSSRALFDLEKEHQLFEKEGYEAFKDYQVEHCDDPLQPGVAFPFVKRLI GLNAFFPDLEPFRVVALSRNSPVTARRFFNSCRHYNLPIDAGAFTSGQSTLPYISAFKVS LFLSANAQNVTHAIEAGLPGGLVLPGQMLDADEDDKTLRIAFDFDGVLADDEAEREYQKE GLKAFQKLELEKAQTPHAPGPLMDLFAKLSKFQRLDSQRRGKSDPYFKPAIRISIVTSRG AQSEERLITTLKTFGMSAAELFLLDGLDKTPILEAIRPHIFFDDQARNLESTHTKIPSVL VPFGIHNENNNKIK >gi|319805821|gb|ADMF01000004.1| GENE 31 30317 - 31114 100 265 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPAASSLLPWFAPRLSRPMMGVLNNLGHEMHYTRGEVLYESPGFFRPLMLVRRGIVARAL MDPLHADPLLVSLSGPRALCGSCETLYVQDRMVRRHWCMTSVDVHVVNADLLLRICDQNP LWQRELSNYSAICALSDRLGMLVTHATSLEERLGVLMIASSLSTDSEFLERFRDPSVEWV PLPVLPSMHVAKVLLSANRAKIRGVLQRWLQEDTVRWRSHKILLSRPRFAAFWNRVEPVL RTVAATEPGFPIKMPVRDLELPSEL >gi|319805821|gb|ADMF01000004.1| GENE 32 31172 - 31825 525 217 aa, chain + ## HITS:1 COG:YPO3551 KEGG:ns NR:ns ## COG: YPO3551 COG2823 # Protein_GI_number: 16123695 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Yersinia pestis # 19 196 12 189 191 96 42.0 3e-20 MNSLTIFRCTVVATVLSAATLLVSGCIAPLVIGGAAVTTTTVMTDRRTTGTIVSDEVVEK RIAYDVSQVLKDKPYHINVTAYEGRVLLSGEATSLEDRRKAEEIAVKSLDVQGVINEIAV MDPSSVSTRLSDTVLATKVRTAIIGNSTISLNQMKVAVERGIVYLMGVVTREEAQTAAQT AAKVSGVQKVVTCFSIATREEIDHRMKDLQQAKPSDE >gi|319805821|gb|ADMF01000004.1| GENE 33 31927 - 32904 492 325 aa, chain - ## HITS:1 COG:HI0509 KEGG:ns NR:ns ## COG: HI0509 COG1575 # Protein_GI_number: 16272453 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Haemophilus influenzae # 22 308 10 304 308 132 33.0 7e-31 MTPHQPLPPPSEQPPSPAYPGRLGAWLAFTRPKTWLLAVAPVLAALALAWAEAHAFSPVV ALLTLTIAVLMQAISNMENDLGYSKRKAETGNRRGLPRATTMGWISNHTAEWAIRMAAVL AMINTAALIYFGGWPFALVGAASLTAAYCYMGGPKPIAYTPFGEVLVLLFFGLTAVCGTY YLQTSELTINCILLGAALGTIASGVLAVNNFRDREHDESIGRRTLAVLIGEKSFLRLFDA LLLIPYALVALMVVTDISRWPYFLVILSLPLAMRVSQQIRRSQHEALNEVMFGCVQLEAR FALLFAIGASAQAVLMSLTLSNMVN >gi|319805821|gb|ADMF01000004.1| GENE 34 32917 - 33321 438 134 aa, chain - ## HITS:1 COG:NMA1380 KEGG:ns NR:ns ## COG: NMA1380 COG2921 # Protein_GI_number: 15794301 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 51 134 8 91 91 68 42.0 2e-12 MSEKIQEKSEQKFEHLEAEDAEKVAVTAEKKTIEKACEDAAPLEGAVDEASSVMKFPMDF PIKVMGLAAPTFPKVVADIARLHCDDFDDSKTTVEYSRTRKYMSVTVEVIARSKEQLDDL YRAYTSNPMVKIVL >gi|319805821|gb|ADMF01000004.1| GENE 35 33332 - 34450 544 372 aa, chain - ## HITS:1 COG:PA3999 KEGG:ns NR:ns ## COG: PA3999 COG1686 # Protein_GI_number: 15599194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Pseudomonas aeruginosa # 14 363 31 379 386 115 26.0 2e-25 MHRLLTFILLPLFALPSAVAASSVLVDLESSQTILADRPRTPENASSMLPLMTVYTTLEL LKNGTIKNNLFESVKNPWSGPDITLADLLQGLLMTGDPDAVEAVRQTLQLSEKDFSRQLN HTADALGMFATEFTFPCNENTPCISTAQDMALLAESLYTHHAISRIWGASHSLTLPDGKI LHTENFFLEKSPAITGVYVSPKREHIASTAAVLSENPKGSDGRLRRLLAVSLNNNDRDSL RQEISSLLLRGYRDYETLKLYSEGDFVANVPIYKGEETDVRAVVPQTVFITMTTEQMLTA GAKALEVRVRYASPLIAPIKAGQYVGTLEIHAGLKLAQTIPLVAQSDVDEGNFWKRFRDT VRIALSQKILHQ >gi|319805821|gb|ADMF01000004.1| GENE 36 35136 - 35390 113 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVDDLLEVFKSLEDEDGVGRLFERWRLYDAFYGKEVLWRELDSGRTALGIDCGIDAEGR LIMQRSGAEGLHFLSGELVSLANS >gi|319805821|gb|ADMF01000004.1| GENE 37 35403 - 36185 402 260 aa, chain + ## HITS:1 COG:RSc0311 KEGG:ns NR:ns ## COG: RSc0311 COG1521 # Protein_GI_number: 17545030 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Ralstonia solanacearum # 4 254 14 281 295 85 32.0 8e-17 MKTILVDLGNTALKWAVLGNEHEPHTVVHRGAPESLHDLYEVWQGEAPDAVLGCTVAAPK LAFSATKFFNACDIPWQWVHSLPTFRCAQWELRNNYLHPELLGADRWCAAIGAIDSAPAE AILIVQLGTATTVDAVLRESERHYVFLGGRIAPGPTMMQQSLVNGTAALTSDIGLWQSEP RLTKDAIVTGILDSQAGLVRLAFEELAQQVRDPASVRVVVAGGSARFAQERMRQVLPQME LRHNLVLLGLAALARARTGS >gi|319805821|gb|ADMF01000004.1| GENE 38 36638 - 36994 145 118 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEETDASIYMVYSGPFKSEGTAKQELKRLTDLGLQRASIIKLSAAGWAVLMGKTHIRPKA KLWAEEAARAFKVKSIVVDEERRYNKAFNLIFPGLSSSENQKLRRALTMQGAQFSACD >gi|319805821|gb|ADMF01000004.1| GENE 39 36996 - 37439 156 147 aa, chain - ## HITS:1 COG:RSc0455 KEGG:ns NR:ns ## COG: RSc0455 COG0537 # Protein_GI_number: 17545174 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Ralstonia solanacearum # 6 142 10 142 147 100 40.0 1e-21 MNMTHCEFCTSQHQAEFWRGRYFYAIDAGSNDFPGFIRIVAVDHVAEMSALSPAVRTYLW DLLETTEETMRDSLAPDKMNLAEFGNMVPHLHWHVIARWKDDGWYPECPWGTKQREVNAE IIKMRRKSAEAMLPKLATALAAISEPQ >gi|319805821|gb|ADMF01000004.1| GENE 40 37444 - 37659 130 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRDCVTQVIVRWRDGEEDNFATPFEAENYINWALDELGEPEAAWLEDMQGRKKWDYRLV EDEEGRLRLMD >gi|319805821|gb|ADMF01000004.1| GENE 41 37659 - 39068 922 469 aa, chain - ## HITS:1 COG:ML1193 KEGG:ns NR:ns ## COG: ML1193 COG0624 # Protein_GI_number: 15827607 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium leprae # 39 452 15 429 442 105 28.0 1e-22 MTTTAEFIKNAWKGETLEAMKNFIRIPSKSSAFEADWEVRGELLRAVRQAETWGHQRFPE GIFDVLQKPGIPPALYIDLPAFGGHTGRPVFFYGHFDKQPETQGWSEGLGPWTPVVKDGR LYGRGSSDDGYSFYTALTAIQALEASGIPHPRIVGLFETDEESGSIDLAQYLKDIAPRAG NPCILAILDLGIHDYDRVWLTQSLRGVVSFKLKVEVLQHPVHSGIASGIVPSSFAVMREL LDRLEDPTTGRVKLPSFHVELPEEHRETLKRCAEIVGQHAVEFPYAGDTEPRSSDPFEAM KRNTWEPSLSILGADGLPSTSEASALLRASTTLALSFRLPPRLDAQRALNEAISAVTTNI PSHAKVTVYDLRAEGGFDAPALAPWLKNSIDKASTEVFGHPVEFCFEGASIGTMRDFRTT FPNASFFNTGVLGAKENAHAPDESLPLSYVERLTEVIARVVASVPSKEA >gi|319805821|gb|ADMF01000004.1| GENE 42 39145 - 40026 360 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|154175501|ref|YP_001407903.1| 30S ribosomal protein S16 (BS17) [Campylobacter curvus 525.92] # 19 278 9 258 270 143 36 3e-33 MKQHSVLLAVAATAIIAALAGCSTHSPYYDKDGPPSVGAHIESSSATPKIEAFRQAANRP YTVLGTRYSPMTTDQPLRQRGTASWYGKQFHGNKTSIGEVYDMYQPTAAHPTMPLPSYAR VTNLKNNKSIIVRVNDRGPFLHGRIIDLSYAAAKTLGYANAGTAQVEVERLTWDDIRSGR WKANTSNTNMLASATAPLTSPAPAPSVSAGISKPQSGWGVQVGSFSSEDNARSWAAHCQA VLAAVGDQRTARIVQDGMLWRVIMDQGMTYESAASAARIIGSQLGVQAFSIQK >gi|319805821|gb|ADMF01000004.1| GENE 43 40051 - 41160 734 369 aa, chain - ## HITS:1 COG:RSc0063 KEGG:ns NR:ns ## COG: RSc0063 COG0772 # Protein_GI_number: 17544782 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Ralstonia solanacearum # 22 364 17 372 380 334 53.0 2e-91 MMEAKRLIGLATQWLLARVLRYDLMLLTIVMCLITVGFITLFSAGYSFPWRIEDQMRNII VALTAMFIVSFVPIRWVRKVSVAAFAAGCLLLLATELVGVTVKGATRWLDIGVRIQPSEI MKLAVPMMLAWYYWKRAEQTVWWDHLLALAILSVPVAFILKQPDLGTAILVSIAGLAVIF FAGINAKLVTACCAIGIALMPLLWTMLHDYQRERILTLIDPTLDPLGKGFHTLQALIAIG SGGLSGKGWMEGTQAHLDFIPERTSDFIFAVFGEEFGFVGGVLLLILYLSLIARSFYIAA HARSRYARLLAAAIGVIFFTYSFVNIGMVSGILPVVGVPLPFMSYGGTALLILGICTGIL LSISVDAKD >gi|319805821|gb|ADMF01000004.1| GENE 44 41157 - 43076 878 639 aa, chain - ## HITS:1 COG:RSc0062 KEGG:ns NR:ns ## COG: RSc0062 COG0768 # Protein_GI_number: 17544781 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Ralstonia solanacearum # 7 631 3 647 801 575 47.0 1e-163 MALETLEFKDEDESVGPFRRRLFFVFSLVALCFLILACRLAWLQIINRDLYVERAEQNRT VTTTSQGSRGLIFDRNGTLLAGNRLSWSLEVTSSQTAEPVEQLFDRLAEIIPITSADRRR YRRLRENFNRYDSVPIRTDLTDEEVAVFAAQRWRFQGLELNQREHRIYPEGAVGSHFLGY VGALSLNDKKRLDAAGDLALYQGEREIGKVGLERSYEKTLHGTPGHEILEVSAGGRPVRT LELEAAQPGSNLTLTIDLNLQRVAEKAMTGKTGSVIAIEPKTGRILAFASLPTYDPNLFP GGIDPESWNYLNTAEEKPLLNRAMRGIYPIGSTYKPFMALAGLELGAVTADYVLNDTGVF QVGNHKFRDVTGSPKGLLSLRKSIAVSSDIYYYWLATQLGVDKIHDFMQQWKFGAKTGID LVGEQTGILPSRDWKEARFKEPWYVGDTPSLGIGQGYNAFTLLQLAHATATLANRGIIMT PHLVDKVENPVTGESIKVDAEPTGKIPLKDANLDVVIAGMTDVTRTGTARSVFQGAPYSV AGKTGTAQVISIAQDDRWDEKKVSRKHLDHALFIAFAPARNPRIAMAVLVENGGFGARAA APVAKELMDYWLTGENSLGLPPPKNTPLIPMKNAERKKP >gi|319805821|gb|ADMF01000004.1| GENE 45 43098 - 43619 382 173 aa, chain - ## HITS:1 COG:RSc0061 KEGG:ns NR:ns ## COG: RSc0061 COG2891 # Protein_GI_number: 17544780 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Ralstonia solanacearum # 20 173 10 164 170 81 34.0 6e-16 MSGLFKKRLDDSAESRMEHPASKSWIFFTFLLAFVLCIVFGEIFWAPDFVALTLIFWTLR EPDRVGFLTAFICGILMDALFGTVLGQQSLAYVTLCYLTFALSRRLPSFDLFGQSLHILP VLLISQLFVMLVRLWFDGLWPGWEWFLASVTGALLWGIWTKLLTPRALRSASL >gi|319805821|gb|ADMF01000004.1| GENE 46 43616 - 44545 481 309 aa, chain - ## HITS:1 COG:PA4480 KEGG:ns NR:ns ## COG: PA4480 COG1792 # Protein_GI_number: 15599676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Pseudomonas aeruginosa # 24 309 4 277 330 130 30.0 3e-30 MAYGAPPLFRQGVSIRARFLFFLMLSLAVILVDGRLRALDDFRSALTSFLTPFKEVVQLP GLFIENSAGYFISKKNLNEEIQRLTKENQLLQLDAARMEEMRQENENLRHLVSALAATTD HVVTTEVIGRPADPFSRRIQIAAGALDGVQVGMPVIGPFGVLGQVSRTVSHQSEVTLISD HKSRISVINNRTGQIFLLAGTGDSGLLTVAFAQPSADLQPGDELVTSGLDHLYPKAVLTA IVKSSTYVPGEAYRRVEATAAADLTDVQFATVVLVNPHPTAELDIKDVKPQNRFERRDKA DRQNRRDQK >gi|319805821|gb|ADMF01000004.1| GENE 47 44569 - 45612 804 347 aa, chain - ## HITS:1 COG:RSc0059 KEGG:ns NR:ns ## COG: RSc0059 COG1077 # Protein_GI_number: 17544778 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Ralstonia solanacearum # 1 345 1 345 347 524 80.0 1e-148 MFGFLRNYFSNDIAIDLGTANTLIYMRGKGIVLNEPSVVAIRQEGGPNGKTTIHAVGREA KQMLGRVPGNISAIRPMKDGVIADFTVTEQMLKQFIRMAHPSHLFAPSPRIIICVPCGST QVERRAIKESAFAAGASEVFLIEEPMAAAIGAGLPVNEAAGSLVVDIGGGTTEVGLISLG GMVYAGSLRVGGDKFDQAIINYIRRNFGMLIGEPTAEYIKKQIGSAFPGSEMLEIEVKGR NIAEGVPRTFTVHSNEVLEALTEPLNQIVVAVKNALEKTPPELGADIAEHGLMLTGGGAL LRDIDLLLKEETGLPVHVAEEPLNCVVKGCGIALENMEKLRTAFAAG >gi|319805821|gb|ADMF01000004.1| GENE 48 45853 - 46140 386 95 aa, chain + ## HITS:1 COG:NMB1355 KEGG:ns NR:ns ## COG: NMB1355 COG0721 # Protein_GI_number: 15677220 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Neisseria meningitidis MC58 # 1 95 1 95 96 79 45.0 1e-15 MALSAGDIHRIADLGRIDISDEQVKVMQGELNDIFQMIEQIRSIDTSGVEPMPNPHDGIE HLRDDIVTEGDNRTENMKNAPEKSEGYFLVPQVIE >gi|319805821|gb|ADMF01000004.1| GENE 49 46159 - 47613 1241 484 aa, chain + ## HITS:1 COG:NMA1568 KEGG:ns NR:ns ## COG: NMA1568 COG0154 # Protein_GI_number: 15794461 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Neisseria meningitidis Z2491 # 7 481 5 480 481 520 53.0 1e-147 MENVFDSVGELSRRLHNREISAVELARGYLERIEAKKNLNAFLDVRPEETLKQAEAADAR LSAGTAGPLTGIPIAHKDIFVTKEWSSTAASRMLKGYMSPFDATVVRQLKNAGMVCLGKL NCDEFAMGSGNENSAFGRVHNPWDMNAVPGGSSGGSAAAVAAGLAPIVTGTDTGGSIREP ASFTGVTGVKPTYGRPSRLGMIAFASSLDTAGLLGHSAEDCAAVLGAMVGHDPWDSTSVN MPTEDFTRDLAKPIKGMRIGVPYSWMGEGLDPEVRKSIDEVLDFYRREGAEIVDIELKMA RLGVPVYYVVACAEASSNLSRFDGVRYGHRAAEYTDILDMMKRSRDEGFGPEPKRRIMIG TYVLSHGYYDAYYLKAQRVRRLIANEFHDVFKTVDAIALPVTTGTAYDFGTNADPVSAYL SDLYTVPASLAGLPGVAMPCGIHSNGRPIGLQLLGEHFTEARLLQLAAQWQRSTDWHLRH PADC >gi|319805821|gb|ADMF01000004.1| GENE 50 47649 - 49100 912 483 aa, chain + ## HITS:1 COG:RSc0054 KEGG:ns NR:ns ## COG: RSc0054 COG0064 # Protein_GI_number: 17544773 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Ralstonia solanacearum # 1 483 1 487 488 619 68.0 1e-177 MQWEVVIGLETHVQLSTQSKIFSGAPCHFGDAPNVHACYVDLALPGALPVLNHGAVERAI RFGLAIGAKVANHSVFDRKNYFYPDLPKGYQISQFELPIVLGGQLTFPVEPKTGEPYMKT INLTRAHLEEDAGKSVHGIVSGHSGIDLNRAGTPLLEIVTEPELRSAEEAVGYARALHAL VVWLGISKGNMQEGNFRCDANVSVRPKGETKFGTRCEIKNLNSFRFLEEAINYEVQRQIE VIEDGGKIVQATRLYDPDKGETRQMRTKEDSMDYRYFPDPDLLPLEVSNEWIAKVKSEMP ELPQEMRQRLMQEFGLSEYDAGILTGGRDIADYYVAVADAAADKKIAANWVMGEVAAALN QTEGLTFATAPVTPTLLAKLLGRIADGTISNKGARVVFQALWDGEGQDVDQLIDAKGLKQ ISDAGALEAIVDEVIAKNQKSVDEFRSGKEKALNALVGQCMKATKGKANPGQLNALLRKR IAG >gi|319805821|gb|ADMF01000004.1| GENE 51 49197 - 49874 568 225 aa, chain - ## HITS:1 COG:RSc0139 KEGG:ns NR:ns ## COG: RSc0139 COG0461 # Protein_GI_number: 17544858 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Ralstonia solanacearum # 5 224 19 232 237 226 58.0 4e-59 MQNTKQQFIEFALEADVLRFGEFKTKAGRLSPYFFNAGLFNTGARLDRLGAFYAETLLAA RKAGRLDFDMIFGPAYKGIPLAASVAMNLSRMGCDVPWAFNRKEIKDHGEGGMIVGAPLK GRVVIIDDVISAGTSVRESVKIIEANNASPSGVLIAVDRMERGGTADAPTATSAVQDVEK TFGLSVVSIINLHDLLAFMDGPSEKAKTVAQYRDAVAAYRARYGA >gi|319805821|gb|ADMF01000004.1| GENE 52 49997 - 50788 212 263 aa, chain + ## HITS:1 COG:RSc0140 KEGG:ns NR:ns ## COG: RSc0140 COG0708 # Protein_GI_number: 17544859 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Ralstonia solanacearum # 1 260 1 261 261 340 62.0 1e-93 MFRIITFNANGIRSASRKGFFTWLRTMSPDVLCMQELKAQESDLTEDLRTPLGFRGYFHC AQKKGYSGCGLWSRVKPFAVRTGFGNSEFDAEGRYVEADFGSVIVISVYFPSGSSSDDRQ SAKFRFLDAFKVHMDELRQSGREVIICGDINIAHKEIDLKNWKGNLDHSGFLPEERAWLD QRFGKEGWVDVFRMLDPRPERYTWWSQRGQARAKNVGWRIDYQITTPGIAALARNTGIFP DEKFSDHAPLWVDYDLMVEGAAQ >gi|319805821|gb|ADMF01000004.1| GENE 53 50785 - 51492 485 235 aa, chain + ## HITS:1 COG:RSc0674 KEGG:ns NR:ns ## COG: RSc0674 COG1187 # Protein_GI_number: 17545393 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Ralstonia solanacearum # 3 229 10 236 252 214 50.0 1e-55 MILADILFKQGFGTRYDCRSIAASGAVSIDGRELTDPDEDFDPEGLVLTWRGMQWPVSDN VLIAMNKPTGYECSLKPSAHPSVMNLLPGPLRTRGVQPVGRLDWDTTGLLLFTDNGALLH RLTHPKKHVNKVYRATLSHPAANGTCEKLLSGVVLDDDPKPVFAKAAELMAPDVLMLTIS QGKYHQVKRMVAACGNRVVALHRIKVGAYELPADLKPGEWCWLRGPESVLGEGSK >gi|319805821|gb|ADMF01000004.1| GENE 54 51504 - 52820 453 438 aa, chain + ## HITS:1 COG:RC0535 KEGG:ns NR:ns ## COG: RC0535 COG0477 # Protein_GI_number: 15892458 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Rickettsia conorii # 22 425 18 406 414 209 32.0 1e-53 MLRKSVGWRVYLESGAIRMAFFGFSSGLPLLLVLGTLGFWLREAGVDLKTIGFMSWIGLI YGLKWSWAPLVDRLPIPILTHWLGQRRSWLLVAQLGVMLGLFATAFADPQINLGILAVST VGTAFASATQDIALDAYRIESADSRRQAAYAAMYQAGYRMGMIWAGAGALAFAAWAAGDT SGYLHSAWGVSYSVMAMSMSVGIVTTLFAPEPSAKEQRVQTVKKMPFWQRTKAAIVEPFT LFFHRFGWFALLVLVLIATYRISDVVMGIMANPFYQDIGFTKEQVAAVSKVFGVVMTLLG AFIGGAATMRYGVLKMLMLGAVLSAATNVLFSMLAQIGASLTLLIAAVSADNLAGGLASA AFVAYLSGLTTRGCSATQYALFSSLMLLLPKFLAGFSGILVELVGYSNFFLITAAIGVPV VGLVMLVMRWVPESADET >gi|319805821|gb|ADMF01000004.1| GENE 55 52850 - 53563 481 237 aa, chain - ## HITS:1 COG:no KEGG:Mpe_A3702 NR:ns ## KEGG: Mpe_A3702 # Name: not_defined # Def: SecA-related metal-binding protein # Organism: M.petroleiphilum # Pathway: not_defined # 8 227 6 237 254 107 32.0 3e-22 MTQDVNFYDKPLSDEEFVEIGELLALMPEPYESMEPDRMDGFLTAIALLPEPVAPSEWMP FVFDEEGRTDAALTDSNKQHELEDLVYRRMRNIERTLAACDPIDPIIYDVEDERGRPIGG WEAIAALEPFAAGFLEAINRWEGLKDTNDEMIDSALLGILRHLPANLLGDLAPIKEDLDF ESPLENIKDALEDVAESVAEIAAVTRGFTSKTKQSKVKGGQRSERRPNQNQKRYRRG >gi|319805821|gb|ADMF01000004.1| GENE 56 53574 - 55610 889 678 aa, chain - ## HITS:1 COG:RSc0348 KEGG:ns NR:ns ## COG: RSc0348 COG1080 # Protein_GI_number: 17545067 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Ralstonia solanacearum # 74 624 5 550 586 348 39.0 1e-95 MATEENKTDTAPITNKSDAGISLPPQEKSKPSAASDAVETKTANIQTLEASAVSSRKTDS SVELQIGGAEENLLTGLKVCPGVAWGLTLQLTSSDLEIHQFAIDKSAVRGEIQRLRMATA SANKQLEQLAETLDEDAPAEASAFLDVYQTILQDPSLITETADIIREKLVNAEWALSLRL EQIRRDFEQIDDDYLRNRLEDISGVFQRIQRVLAGRRSAASLLKAEEFDDSFILIADQLG PADMLQLRERDDLDIVGIIMETGSVTSHSAILAASLGIPTLVGVTNAIERLGTGREILID ATAGTVKVAPSPEEKKAAAAAMKSLRQRKRLLQKLRDEMPVTTDGHSVRLYANIALPEDM PDARKAGANGIGLFRTEFLFLNRDALPDEEEQVSAYQKVIRGMRGKTVTIRTADLGGDKM PSKEALALLGEDEFDEENPALGLRGLRFAFTHRPFFITQLRAIMRAATSAPVGTVRILLP MVTSASDVTEVRLCLAQAAAELDSENLKYEQNLPLGGMIELPAAVASIGDLVQILDFFSI GTNDLVQYTLAVDRTNARVSRWWEECHPAVLRLIAQTVKRVREAGKGISVCGEMASRLNM APFFIGIGCSALSMDAAHIPAMKECVRKLSAESCEDFARGLLRRRSTESIREAIDGYALT LLPSSTEKLAERTHSKST >gi|319805821|gb|ADMF01000004.1| GENE 57 55628 - 55897 205 89 aa, chain - ## HITS:1 COG:XF1403 KEGG:ns NR:ns ## COG: XF1403 COG1925 # Protein_GI_number: 15838004 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Xylella fastidiosa 9a5c # 1 88 7 94 95 82 51.0 2e-16 MLEIKLTIKNKLGLHARPSALLAKTAGLFRSAITLTCGKRTVDAKSILGLMTMAFPCGTE LTLSVDGPDEKAAAQSISELFENRFGEED >gi|319805821|gb|ADMF01000004.1| GENE 58 55890 - 56315 186 141 aa, chain - ## HITS:1 COG:RSc0346 KEGG:ns NR:ns ## COG: RSc0346 COG2893 # Protein_GI_number: 17545065 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Ralstonia solanacearum # 1 108 18 119 169 77 46.0 6e-15 MTVGICIIAHAPLASALKTCAMHIYSMTGDTAAERIEAYDVPSTVDTEAGLIEAQQRARR LLEESHEGVLVFTDILGATPANIAHRLLDDPHICVISGVNLPAIIAALNAPADAPVSQVM TLAEAAARAGLSSQSGRSDNA >gi|319805821|gb|ADMF01000004.1| GENE 59 56449 - 56838 262 129 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALIQFSCIATGPFITFKETAERIFDALGEPFHEHGAFAAEDLPSILAKLDAAAAADRKL EQEIEIEREKRLRTGSYDAELRALEAEKEQADKTKHRENSVRLYQRIAPLQDMIRRAIKH QKAVMWGPL >gi|319805821|gb|ADMF01000004.1| GENE 60 56903 - 58366 1086 487 aa, chain - ## HITS:1 COG:NMB0661_2 KEGG:ns NR:ns ## COG: NMB0661_2 COG0168 # Protein_GI_number: 15677999 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Neisseria meningitidis MC58 # 6 486 2 482 483 336 40.0 7e-92 MFRYLLFPVLNALGSVLAAFAALMLVPALYSWAEGDGAVWDFLYSVGITFAAGAILFVTC LPFRRELTARHGFLLVTLSWTLTSAFATIPLLLNQPQYNFSELYFETVSCITTTGSTVIT GLDSLPPSINGWRCFLSWVGGMGLIVFSVAILPLLGIGGAQLMKAETSGPMKETRLTPRV AETARALYIIYLGISVTCVIAYHLAGMNWRDAVMHMMTTVSLSGIATHDASFAFFKSSEV ETVAIFFMLICSLNFALHFVAWRRKSLLAYWRSTEARCCLAAFLLLAAGTAFALYYTGAY PEPLEAFRTAFFAVASTASTTGYASADWSNWPYGIPFILLLSSAVVSCAGSTGGGLKMLR VAIIFSQLRHEFTRLLYPNAVTPVTIDAAEIPNKIVFSVLSYAFIWLLSALTGVLLLLGS GMPPLESLSAAVASITNLGPGLGSVGPAGNYQALSDLQLNILSSLMLIGRLELFTVFVLF SRAFWKP >gi|319805821|gb|ADMF01000004.1| GENE 61 58378 - 59793 945 471 aa, chain - ## HITS:1 COG:PM1563 KEGG:ns NR:ns ## COG: PM1563 COG0569 # Protein_GI_number: 15603428 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Pasteurella multocida # 1 470 1 457 458 356 42.0 4e-98 MKILIIGAGRIGTSVAESLVSEDNDITVIDKNPESISLLQARFDLRGIVGNALSPALLTE ASANDTDLLIAVTSSDETNLAATLLADKLFNIPTRIARVRNEELRSYPRILKEEGFSATT IIWPEQALTRYLVKLINIPEALQVQEFAEGRVSLVVVRAEAGGPMVGGPVGELNAHIPNA CARIAALFRRNQCLSITGNTLIEAGDEVTFVADARHARLVTTQLKRRAKAARNVIIAGNA ELSLGIVNALYEADEDESVAIPAAIRVIEADRREARKLALALESRAIVLSGDFDDEDTLL SAGMENCDLFIALSDDDENNILSTLLAKKLGAKRTIALVNRRIYGELIEGSRIDVTVSQT QAALDEIIRYVRHGDVTAACTLRHGAAEALEIAAHGTTKSSKVVGRRIHDVPLPAGCSVA ALIRGEGEHAEVLMAQFDLVVEAEDRLIIFVPNRRLIPKIEALFAVDVGFF >gi|319805821|gb|ADMF01000004.1| GENE 62 59809 - 60669 544 286 aa, chain - ## HITS:1 COG:RSc0078 KEGG:ns NR:ns ## COG: RSc0078 COG2204 # Protein_GI_number: 17544797 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Ralstonia solanacearum # 1 223 1 236 239 169 40.0 7e-42 MTDILIVDDELGIRNILSEILGEQGYRVATAANVAEAKKAVTGRHYDLILLDIWMPDGDG LTLLREWKYSGALTFPVIVMSGHGSLDHAKRAIEDGAIDFIEKPISLKLLLSGIKNGLAK WSDRQKQLDEDRTRDRRMRRRANNSGPRPALPAFDIKEYGLTIDFNRPFRDMLYDFERAY FRTVLKHLNHSMADLARHAGMERTHLYRKIRMLGLDVEAMREEARQAPYNTPAVAKPNSS ALSNFEETKPKERPLAPENAVVRLDMTNSIEFPTGSTLDNLRSPVK >gi|319805821|gb|ADMF01000004.1| GENE 63 60666 - 62978 1186 770 aa, chain - ## HITS:1 COG:RSc0077 KEGG:ns NR:ns ## COG: RSc0077 COG5000 # Protein_GI_number: 17544796 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation # Organism: Ralstonia solanacearum # 8 747 19 811 811 443 37.0 1e-124 MPAWLRVVFFTALGLAGLSLFVLAATSSDSKLFERWFPDLLIINQAIAAALFVVVSAMAF RLIQNVRNRVFGAKMTARLALTVAGMVLIPCALIYFVSSVFISRSIDSWFDVRVEKALDS GVTITRGILTEQQQQIEVQAQHMASLLTNTPVSMILPELLKQLENRPNQEALVFLSNGTA VAAAGSRINVLMPDMPTAAQLQTVKNTGIYSVIDGDAFENYDALREGKLSIRVIVPITND PSQGLPQSTLGLTGAANASNAAALNRQQLYLQLIQPVAADTAKNAAMLVAGYRDYQTLIL SRQSLQSIYASTLLLVLLLGALGALASALSFARRTVSPVQQLEQGTRRLADGNFQPIREF PGSNEINVLTQSFNQMIREVSASRRAIDEQRRRAEQVQAYLERVLANISSGVVVLDRSEQ IVTANVAARAILGEEVCRRGKPFSSVNADLAQAVRNCQLSLSLGPDATTANLEYDLARPT GDIPLFLKLSKMPLGNGLFGLVIVFDDVTKLIEAQRATAWGEVARRLAHEIKNPLTPIQL AAERLELRLGPKLSNDDALILHRAISTISTQVDALKQMVNDFREYAKLPQAKLSALDLNN FLSEIAQLYQEAGTSIKLDFEKNIPLIEGDPAQLRQVLHNLIKNSIDAAEGEDPGIVIQT RHIVTDSGMNAVQLHLHDNGVGFSENILNRAFEPYITTKPTGTGLGLPMVKKILDEHRAV IRLSNRTDSSGSLVYGAQVDILFEHLAAVGRKDHSSQISNYDEQHRASEK >gi|319805821|gb|ADMF01000004.1| GENE 64 62983 - 63591 348 202 aa, chain - ## HITS:1 COG:no KEGG:RALTA_A3151 NR:ns ## KEGG: RALTA_A3151 # Name: not_defined # Def: conserved hypothetical protein, proline rich; putative membrane anchored protein # Organism: C.taiwanensis # Pathway: not_defined # 49 183 70 206 291 134 45.0 2e-30 MLPRSILCHAAKLAPIVLTCALAADVAWCARAELMGAKITIDEPGEPPGLFVEAHYEFDL PTPLINAMHRGIALYFAYSFELTKSRWYWLDKEVASSTFTIRLAFNPLTRRYAVSYSGYS LNFDSLEEALPYIKNIRRWRVAGAGDAKPGTTAELRFGLDVGKLPKPMQVTNQDTDDWNV VSDPAEIPIPTTVMSAAAAAEE >gi|319805821|gb|ADMF01000004.1| GENE 65 63608 - 64978 443 456 aa, chain - ## HITS:1 COG:NMB0112 KEGG:ns NR:ns ## COG: NMB0112 COG0144 # Protein_GI_number: 15676040 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Neisseria meningitidis MC58 # 27 455 8 418 419 309 42.0 8e-84 MMDQAPNKNTTDKAANRLQLPLQQLIEFAADVRRRMLEGASLSSALETVSIGLSAQARAA LQSIVYDVIRRRAFSNAAAAGLLSSPPPPPVMGLLEIAIALVVEGRYSDFTLVNETVNAA RNNRRTVRFAGLINAVLRRFLREREQISAVLQKDLDVRFNAPLWWIRRIKESHPSNWEEI LRIGTLHAPMTLRVNARRITPAAYLEELKARGIPALRVGRSAVMLESPLPVKDIPGFTEG IVSVQDAGTQLAAEILAPKKNEQILDACAAPGGKTAHLLESADCHVTALEIDPKRAELIK STLLRLGVEATVRAADAAMVSEWHSGREFDAILLDAPCTASGIVRRQPDVPWSRRPEDPA RLAREQARLLNALWPLVKKGGRLLYCTCSIFPEEGPDQIRRFTANHGDAQLTAFKGAPTG MMSLVPADHVHELPFNPNAAEPLVHDGFFYALLTKL >gi|319805821|gb|ADMF01000004.1| GENE 66 64975 - 65934 440 319 aa, chain - ## HITS:1 COG:NMA0163 KEGG:ns NR:ns ## COG: NMA0163 COG0223 # Protein_GI_number: 15793190 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Neisseria meningitidis Z2491 # 1 318 1 308 308 251 52.0 9e-67 MRIIFAGTPDFAAVALQALTDAGHEIPLVLTQPDRPSGRGMKLTPSPVKVLAQKLGIEVA TPFTLSLKKDPDGAAAMHARLKSLNADLLVVAAYGLILPQPVLDCAKGIGKFRDIKALNI HASLLPRWRGAAPIARAIEAGDAETGVTLMKMELGLDTGPMVAEARTPILAEDTTATLTG RLASMGANLLVQSLQHANELICTPQPDEGVLYAEKLLKSEKRIQWNDSAAVIARRLRAFT PFPGLEFHRGADVVKVWSATAEDADTGLIGEVLSIEHDLVVRCGVGALRITELQRPGKTR SSAQAAVQGLHLQKGEVLQ >gi|319805821|gb|ADMF01000004.1| GENE 67 65993 - 66916 363 307 aa, chain + ## HITS:1 COG:CAP0097 KEGG:ns NR:ns ## COG: CAP0097 COG0596 # Protein_GI_number: 15004800 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 21 304 8 296 299 158 35.0 1e-38 MCFTCGQEEEMSETEILERQGFRYAYRRRGDEDAPAVVLLMGLGLPKEAWPETLVSGLLA EGFQVITPDNRDAGESTHMTSWQVSGRDVFEAIAKTMIGRPVVGEYALEDMALDLERLLD RLSIRRAHVVGISMGGMIAQVFAAQCPNRAATLTSISSAVGNPRTGFGNLRAIAAVAMTG SDGNSAAQHYTHILRTLAGPQYPPSEAELTEAAKLKLAYDAEATRRQLIALLASGNRSRQ VRELTAPTLVIHGRDDPLLPFKAGEETAALIRGAKLIAVDGLGHQLAPALMESYVRWIAE HCHAHPA >gi|319805821|gb|ADMF01000004.1| GENE 68 66928 - 67467 351 179 aa, chain - ## HITS:1 COG:PA0019 KEGG:ns NR:ns ## COG: PA0019 COG0242 # Protein_GI_number: 15595217 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Pseudomonas aeruginosa # 1 166 1 166 168 171 53.0 8e-43 MAKLPILQYPHPKLAAKAEPVADFNDAIKTLVNDMAETMYAAPGVGLAANQVGILKRIVV IDITDDNSDLLVFINPEIIETKGDLVDHEEGCLSLKGLYEHVKRPGQVRVHAQNIEGEPF ELECTGLLAVCIQHEVDHLNGIVFIDHLSQLKKQRACTKLRKLRREDREREKDKEKEHV >gi|319805821|gb|ADMF01000004.1| GENE 69 67566 - 68486 176 306 aa, chain + ## HITS:1 COG:NMB0116 KEGG:ns NR:ns ## COG: NMB0116 COG0758 # Protein_GI_number: 15676044 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Neisseria meningitidis MC58 # 9 294 4 288 397 118 32.0 1e-26 MPIATDCLDEAEEWMRLLLVPNLPVPLALRAVQTFGGVSEALSAPLKELAREVGGRMAEA MRAVGRGARDDALDVALNWLTSRPQTALLPLYDPLYPQQLIEAGTAPLALFLCGDAEVLN KQRVTVVGTSRPDAEGRTNAADFGAALARAGAVSVAALEMPDDVGGAVLEGALSVKGTPI ALLTTGPDRALSAISQLQHRVVDEGGLLISAAFPGASTDEHSRRVRDTLLANFAPMLLVI EAERNDSVMNIARQAADAGVQVGAVPGSIHNRAYKGCHQLIRDGAALVGMITDIGLRKAP AGKLMT >gi|319805821|gb|ADMF01000004.1| GENE 70 68599 - 71187 1507 862 aa, chain + ## HITS:1 COG:RSc0066 KEGG:ns NR:ns ## COG: RSc0066 COG0550 # Protein_GI_number: 17544785 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Ralstonia solanacearum # 1 820 1 821 877 874 56.0 0 MGQTLVIAEKPSVAGDIARALGGFKKDGDFWVSDAMIVGSAVGHLLEIKAPEEYDVKRGR WSFANLPVLPPHFDLQPIKKSIKKFEGLEKKIRSRSVTDIINACDAGREGELIFRYIIQA TGTKKPIRRLWLQSMTKTSIQKAFTALRSDAEMKPLEAAARSRSEADWLVGINGTRALTA FNSKDGGFFLTTVGRVQTPTLAIVVAREEEIAHFKPQNYWEVHATFGAQAGDYDSVWVDA DFKKTKGQSAELKPERLWTAAEAQAIVAKCQGKLGIVTDHKRRATSAPPALFDLTSLQRE ANGRFGFPAKMTLAILQRLYERHKVLTYPRTDSRALPEDYPETMKETLSHLQKLEAYNAF AGQILMSGWVKGDNRRIFDNKKISDHFAIVPTGELPKDLEETEQKIYDLVVRRTMAAFFP SAVFDVTTRETIVEGEKFVTEGKVLVEPGWMAVVGRAGRTQSDLCPITSGEAVQTKNIAV EADQTRPPARFTDATLLSAMESAGKKLDADELRDAMAEKGLGTPATRAQTIEGLIEQKYL RRDGRDLIPNAKAFQLMQLVRGLKIDALTQPRLTAEWEYKLSLIEKNQVSRDEFMHEIRE MTERMVASAKQYEGDSVPIVNPIHFHNRCPACGGEIVENYRRYACTTPGCYFSLSKHPSG RTFEIHEVEELLANHRVGPLSGFMSRRGFPFEGELLLERDKETGQWGMRFAFEERPEVDA EEIASASAVGNCPLCHGRVLDLNDQYVCEHAVNDPRTCTFRVGKTILQRTLTHDEVATLL AEGRTPLLDGFISKRTNRAFKSYLVWDSKKKSVVFEFEKREKPAEKSASDHEEEGPAKKT VRKTTAAKTATGKRTRRTSSGE >gi|319805821|gb|ADMF01000004.1| GENE 71 71395 - 71692 229 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMKKASNKWYFTKETNAKGLCYIYAYQTQWDPVAKKSKRSARKYVGRLAADSVVNITAKF RTEFPQYAQGTFYFGLDKTLVDETAYRRDFPDAPGPKPA Prediction of potential genes in microbial genomes Time: Sun May 29 19:15:23 2011 Seq name: gi|319805797|gb|ADMF01000005.1| Sutterella wadsworthensis 3_1_45B cont1.5, whole genome shotgun sequence Length of sequence - 21916 bp Number of predicted genes - 19, with homology - 16 Number of transcription units - 12, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 25 - 603 474 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein + Term 646 - 691 3.7 - Term 530 - 565 6.1 2 2 Tu 1 . - CDS 681 - 1904 927 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 1942 - 2001 2.1 + Prom 2151 - 2210 3.7 3 3 Op 1 6/0.000 + CDS 2332 - 3354 1086 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 3400 - 3452 9.1 4 3 Op 2 6/0.000 + CDS 3474 - 4652 815 ## COG4597 ABC-type amino acid transport system, permease component 5 3 Op 3 . + CDS 4663 - 5763 888 ## COG0765 ABC-type amino acid transport system, permease component 6 3 Op 4 . + CDS 5771 - 6283 318 ## 7 4 Tu 1 . - CDS 6290 - 6370 79 ## - Prom 6552 - 6611 3.6 8 5 Op 1 . + CDS 6369 - 8705 170 ## PROTEIN SUPPORTED gi|126653373|ref|ZP_01725477.1| ribosomal protein S1, putative + Term 8727 - 8765 5.4 9 5 Op 2 . + CDS 6369 - 8705 163 ## PROTEIN SUPPORTED gi|226312030|ref|YP_002771924.1| 30S ribosomal protein S1 homolog + Term 8727 - 8765 5.4 - Term 9210 - 9249 7.4 10 6 Tu 1 . - CDS 9276 - 10619 714 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 10658 - 10717 4.3 + Prom 10745 - 10804 3.5 11 7 Tu 1 . + CDS 10869 - 12470 1472 ## COG4108 Peptide chain release factor RF-3 + Term 12498 - 12542 4.1 - Term 12486 - 12530 0.3 12 8 Tu 1 . - CDS 12540 - 13784 788 ## COG1160 Predicted GTPases - Prom 13867 - 13926 2.4 - Term 13881 - 13914 4.1 13 9 Op 1 . - CDS 13971 - 14657 758 ## Shal_1410 formate dehydrogenase, putative 14 9 Op 2 . - CDS 14650 - 15003 434 ## Shewmr4_3251 iron hydrogenase, small subunit 15 9 Op 3 . - CDS 15025 - 16395 1372 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain - Prom 16580 - 16639 3.1 - Term 16972 - 17018 13.0 16 10 Op 1 . - CDS 17038 - 18351 1084 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 18396 - 18455 2.1 - Term 18449 - 18492 14.0 17 10 Op 2 . - CDS 18516 - 20345 1539 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 20368 - 20427 1.7 + Prom 20320 - 20379 4.6 18 11 Tu 1 . + CDS 20565 - 21503 689 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 21589 - 21622 4.1 19 12 Tu 1 . - CDS 21550 - 21885 449 ## Predicted protein(s) >gi|319805797|gb|ADMF01000005.1| GENE 1 25 - 603 474 192 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 4 192 398 584 584 122 38.0 1e-26 MEELRLQVQQVLDLKNANKQVPPEKWLTYKRFVCERTTAQGHRYWDRDDNAIEAALRYAG RFAIRTNAEANPFKALSIYRLRGQVEQDFNQFKNWVDGNRLRCTDTAYWGKLLVCTLATS LRMMAIKGAHDREQGNRKIPNNSIDCLFTILKQIQADKRQTANAWVTRTITKKQRDMLAL LGLENPPRVLKN >gi|319805797|gb|ADMF01000005.1| GENE 2 681 - 1904 927 407 aa, chain - ## HITS:1 COG:STM4407 KEGG:ns NR:ns ## COG: STM4407 COG1253 # Protein_GI_number: 16767653 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Salmonella typhimurium LT2 # 3 404 36 437 447 416 50.0 1e-116 MALSEDGDRRAAMVLEMREHPGQFFSALQIGLNATALLGGIVGDAAFSPFFQWLLAEILP GQDWGHISFVISFLIATTLFVIFADLLPKRLAIARPEAVAMFVVRPMHCIITLFKPCVFI LERLSDACIRSLGVPTKRQEAITSEDILASIGAGTAAGVIAPQEEAVIQNVFEMESRLVP SAMTARESIVYFTLDETEASIRAKIGTVPYNRFLVCDKDLDHVIGFVDSKHLLRCVLEEK PITFKDPELVQSVQFIPDSLTLSEVLNTFQRTHSDFAVILNEYALVVGIITINDVMSTVM GDLVTIDEDMQIIQRDDNTWLVDGATPVDDLEHALEIDELPEDSAYETVAGFMMYMLRKI PKRTDKVVYADYTFEVMDVDNNKIDQVLITRNIKKPDDPVKPLPPEA >gi|319805797|gb|ADMF01000005.1| GENE 3 2332 - 3354 1086 340 aa, chain + ## HITS:1 COG:VC1362 KEGG:ns NR:ns ## COG: VC1362 COG0834 # Protein_GI_number: 15641374 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Vibrio cholerae # 25 340 28 342 342 349 54.0 5e-96 MKTTLLSAAVVAAAATAASPAFAGAVLDKIRANDQLVCGVNTSAPGFSSADSKGHWEGLD VNLCRSVAAAVLGNADKVKYVPLSSTQHMTALASGQIDMLARNTTWTMTRDASHGNVFVA VSYYDGQAFMVPKSLGVKSLKELDGATVCVQTGTTTEKTTADYFRSHGMQYKTVVFDTTE ATQGAFLSGRCDAYTSDMSDLAGVRTVAQDPSKFDILPETITKEPLGPAVRRGDWEFFEI VRWSFMAFLNAEELGVTQANVDDMRKTSKDPNVMRLVGTGEDMGRMLGLDKDWSYRIIKQ VGNYGESWTKYFGPTSPLNLPRGMNKLWTDGGLMYAMPIR >gi|319805797|gb|ADMF01000005.1| GENE 4 3474 - 4652 815 392 aa, chain + ## HITS:1 COG:AGc2907 KEGG:ns NR:ns ## COG: AGc2907 COG4597 # Protein_GI_number: 15888895 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 24 387 26 395 400 263 41.0 3e-70 MFARDSFSIVPGDEAWIAREKARRRREYTLQAVLILILVAFIAVLATNVADNLAAKNIHS GFAFLNHRAGFEIGEQLIAYSSSDPLWKAFLTGLLNTLRISACTIVSATVLGVIVGLMRL SRNGVVRFLGAAHVEAYRNVPLLVLLLALYLVVTELLPGVRQAWHLGNWIYLSKTGLLCA VPLWGMKALLGALVVGVFGGWLAAKRLQRVQTNLIANMGGFLIFVILSALVWILCGVIGG WDHPTATRFSMRGGAAMTPEFLTLWLGLTLFTSASIAEIVRAGVESVRPGQWAAAAALGL KSGEAVSYVIFPQAMRLIMPPLASQFMTLTKNSSLAVMVGYPDLVNVGTTVMNVTGQALE VICIIMGVYLTVNIIIAFIMNHFNARIMRAPQ >gi|319805797|gb|ADMF01000005.1| GENE 5 4663 - 5763 888 366 aa, chain + ## HITS:1 COG:VC1360 KEGG:ns NR:ns ## COG: VC1360 COG0765 # Protein_GI_number: 15641372 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Vibrio cholerae # 2 361 8 365 365 239 41.0 6e-63 MPQIQTVGNPGSWVMKLRENCFYSPAASVLSVVLGLIILAVVGYVFDWGIVNAVWDPNPA ACREASGACWGFVAEKWRLIIFGRFPYELQWRPGLATLIIVGMLVVSAIPACWTRQGVRM LLWGWVAAFFAFFILMLGGVFNLEPIGTDMWGGLPLTVIITLFGMAASSPLGILLAIGRR SRMPIVSALSTGYIELVRGVPLITVLFVATFVFPLLLPEWLQCDAFWRVAIGIALFQAAY MAETVRGGLQTISQGQYAAARSLGFTERQCYQYVILPQALVAIIPAFVNSLLSCFMDTSL VTVVSMYDLTGSLKLALGDAVWRAYFIEGYVFIALVYFISSFIISRYSQWLELRLKGAKA RHVVRI >gi|319805797|gb|ADMF01000005.1| GENE 6 5771 - 6283 318 170 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKFHEHIIRVTVPGLPCEVTREELSVELADFAHRPEHFLEEVTKSEVVSPERRGSEPGSI AFERNIYFGHLVFHETVQIGADGSYRSHAAGSGERPASDFSMQIEEPEPGQLFIRFIYFE DRPEVPTAIEMNSREQQVDYLRRLAYESKDQSIVAQMLTDIVERKMALKN >gi|319805797|gb|ADMF01000005.1| GENE 7 6290 - 6370 79 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKILQKIWALSQNLIGSGRSARNNSC >gi|319805797|gb|ADMF01000005.1| GENE 8 6369 - 8705 170 778 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126653373|ref|ZP_01725477.1| ribosomal protein S1, putative [Bacillus sp. B14905] # 598 748 117 272 378 70 32 1e-11 MTEFSSRITTRIAQEISARPNQVEAAVALLDGGATVPFIARYRKDVTGNLSDAQLRILEE RLIYLRELDDRRGVILAAIEAQGKLSDELRAQILAADAKQTLEDLYAPYKSKRRTRAMIA KEAGLEPLADLILADRTVDPMATAGSFINAEKGVADAAAALTGARDILAERISLDPGLRE TLREFMSSRGELVSKRVELAVDQPADADAQSAKFKDYFEFREALSKIPSHRVLAVLRGRR EGVLAASVELTPDEELQNPHPTESLIAKHYGIERTGRLADDWLLSVCRWAWRVKLRLSIE TDLLEEIRERAEETAIGVFGENLRDLLLAAPAGHYAVLGLDPGFRTGVKTAVIDSTGRVL AHDVLMMHTSAAQKQRAEAQLIDLCRKYKPAFIAIGNGTASRETSAIVGDVLRTHSDIEA QRVMVSEAGASVYSASELATEELPNLDVSYRGAVSIARRLQDPLAELVKIDPKAIGVGQY QHDVDHLKLARRLAAVVEDCVNFVGVDVNTASPQLLSHVAGLTRRVAQEIVAYREKEGAF PDRQALKKVPFLGDARFQQAAGFLRIPQGTNPLDETGVHPEAYGLVKKMTKALGLTSVQD LMRNGAVLKRIKPTDFVDEKFGVLTIRDILAELEKPARDPRAEFKTASFKDDVQTIDDLR PGMKLEGVVANVAAFGAFVDIGVHVNGLVHVSALADHFVKDPREEVRVGQVVHVVVIEVD PARQRIALSMRSDGKGGYTSASAVSRKGGSGRNDHSDRNKGGKVAQTALGAAFAALKR >gi|319805797|gb|ADMF01000005.1| GENE 9 6369 - 8705 163 778 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|226312030|ref|YP_002771924.1| 30S ribosomal protein S1 homolog [Brevibacillus brevis NBRC 100599] # 657 777 270 385 389 67 32 8e-11 MTEFSSRITTRIAQEISARPNQVEAAVALLDGGATVPFIARYRKDVTGNLSDAQLRILEE RLIYLRELDDRRGVILAAIEAQGKLSDELRAQILAADAKQTLEDLYAPYKSKRRTRAMIA KEAGLEPLADLILADRTVDPMATAGSFINAEKGVADAAAALTGARDILAERISLDPGLRE TLREFMSSRGELVSKRVELAVDQPADADAQSAKFKDYFEFREALSKIPSHRVLAVLRGRR EGVLAASVELTPDEELQNPHPTESLIAKHYGIERTGRLADDWLLSVCRWAWRVKLRLSIE TDLLEEIRERAEETAIGVFGENLRDLLLAAPAGHYAVLGLDPGFRTGVKTAVIDSTGRVL AHDVLMMHTSAAQKQRAEAQLIDLCRKYKPAFIAIGNGTASRETSAIVGDVLRTHSDIEA QRVMVSEAGASVYSASELATEELPNLDVSYRGAVSIARRLQDPLAELVKIDPKAIGVGQY QHDVDHLKLARRLAAVVEDCVNFVGVDVNTASPQLLSHVAGLTRRVAQEIVAYREKEGAF PDRQALKKVPFLGDARFQQAAGFLRIPQGTNPLDETGVHPEAYGLVKKMTKALGLTSVQD LMRNGAVLKRIKPTDFVDEKFGVLTIRDILAELEKPARDPRAEFKTASFKDDVQTIDDLR PGMKLEGVVANVAAFGAFVDIGVHVNGLVHVSALADHFVKDPREEVRVGQVVHVVVIEVD PARQRIALSMRSDGKGGYTSASAVSRKGGSGRNDHSDRNKGGKVAQTALGAAFAALKR >gi|319805797|gb|ADMF01000005.1| GENE 10 9276 - 10619 714 447 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 18 446 8 440 447 279 37 1e-74 MSYFPTWKLKTSGIIAPDERLPIGQTLALGVQHVVAMFGSTVLAPLLMGFDPNLCILMSG LGTLIFFLLVGGHVPSYLGSSFAFIGVVISATGYVAGSGMNPNIPTALGGIVICGLIYAI VGLIVMSTGVRWIERLMPPVVTGAVVAVIGLNLAPTAVKSVGPTDFDAWIAILTVLCVGG VAVYTRGLIQKLLILVGLSLAYVIYAILTNGMGLGTPINFAKISEAAWFGMPQFETPVFS LSAITLIAPVVIILVGENLGHIKAVTAMTGRNLDPYMGRAFLGDGLATMFSASCGGTGVT TYGENIGVMAATRVYSTLLFPVAACFAIILGFSPKFGAVIQTIPQPILGGTSIVVFGLIA VAGARVWVVNHVDFGDNRNLIVAAVTLILGGGDFTIHLGNFTLGGIGTATFGAIILNALM EFGERRVSGTIEEEPHEANLDAQANKQ >gi|319805797|gb|ADMF01000005.1| GENE 11 10869 - 12470 1472 533 aa, chain + ## HITS:1 COG:NMB0626 KEGG:ns NR:ns ## COG: NMB0626 COG4108 # Protein_GI_number: 15676528 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Neisseria meningitidis MC58 # 8 528 5 526 531 701 62.0 0 MTSPNPALVRDVEERRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGAVKGRKASRHATSD WMEVEKQRGISVTSSVMQFHYRDHVINLLDTPGHEDFSEDTYRVLTAVDAAVMVIDAAKG VEAQTIKLLEVCRMRKTPIITFINKFDREVRDPLDLLGEIENVLKLQCVPITWPIGMGKT FRGVFSLLKNHLVRFTAGEDRLTEDRELIEGLDNPELDELYPMEMPYVRESIELVQGATD PFDLRKFLAGEQSPVFFGSGVNNFGVEDVLNALVDWAPRPQPRDAGVRMVDPFEDHFSGF VFKIQANMDPRHRDRIAFFRVCSGRYQPGMKVLHVREDREMKIPNALTFMAQDRVIMTDA VAGDIIGIYNHGQLHIGDTLTQGEKLQFTGIPNFAPELFRAARSKDPFKAKQLQKGLQEL GEEGAIQVFTGEFGNILLGAVGQLQFEIVAQRLADEYKVDALYESTDVSTARWLSFPDDK TKREFEAEQNARLATDVNGNEVYLATSIYNLETTMKHWPQVQFHTTREMNQVF >gi|319805797|gb|ADMF01000005.1| GENE 12 12540 - 13784 788 414 aa, chain - ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 4 409 7 408 411 339 44.0 8e-93 MLDTPKGLRIHIGLFGRRNAGKSSLANALTHQHISIVSDVPGTTTDPVEKACELAPIGPV VFIDTAGIDDVGELGRARVERSKTVLEWVDLALIVASAQGLENDDREIAADAKHLGTPAI LVLNKADLAGGAPSAEVLSDAESLGLPIVITDARTERGVDALRTAIIKIVQDDTEPDRPI AGDLAHAGDTVVLVTPIDSGAPKGRLILPQVQAIRELLDAHAKVVVVQQDRVAEAINELK VNPAFVMTDSQAIDDVAAQTPDNIPLTTFSLQMAYAKSDLIELARGAAALSHLKDGDKVL ICETCSHHPQKDDIGRLKIPRWLREKTKVNLTIDVAVGKDFPDDLRPYKVLIQCGGCVVT RRHMLMRLRRAKAQGVPMTNYGIAICCLRGYLERVLSCHPEALSAYRQALAKEA >gi|319805797|gb|ADMF01000005.1| GENE 13 13971 - 14657 758 228 aa, chain - ## HITS:1 COG:no KEGG:Shal_1410 NR:ns ## KEGG: Shal_1410 # Name: not_defined # Def: formate dehydrogenase, putative # Organism: S.halifaxensis # Pathway: Glyoxylate and dicarboxylate metabolism [PATH:shl00630]; Methane metabolism [PATH:shl00680]; Metabolic pathways [PATH:shl01100] # 20 222 19 216 226 89 28.0 1e-16 MSDIPALAPDRILRFHAPDKVFHSLNAITWFALLFTGMYVYFLNPSDEAAETAMLIHLIL GAVFTFNLLGFIVIAPDRFALIMRACLEWDRNTIYWFRNFGGYPRRFFKIPFGPVEVPPQ GRYNGGQKASYLLFMGMIAALAVTGWLLWIGAPVTGKFVYWATFYFHVWGSIIISVLVVC AHIPLALLSLEHFKGIWRLGPGTISVEAAEHHAPIWFERDVVRTDIEK >gi|319805797|gb|ADMF01000005.1| GENE 14 14650 - 15003 434 117 aa, chain - ## HITS:1 COG:no KEGG:Shewmr4_3251 NR:ns ## KEGG: Shewmr4_3251 # Name: not_defined # Def: iron hydrogenase, small subunit # Organism: Shewanella_MR-4 # Pathway: not_defined # 1 110 1 105 106 70 38.0 2e-11 MFSQNYSYAERPAALILGRRGFLKVSGLCIGAAVVCGWAIGDMVSRRSSIILARQAGLYQ DDKLCQAMGLASSHNNPVVMSVYKTMKAKPVDHTMHELLHTHFYSRSMLAMTEAAHV >gi|319805797|gb|ADMF01000005.1| GENE 15 15025 - 16395 1372 456 aa, chain - ## HITS:1 COG:CAC0028_2 KEGG:ns NR:ns ## COG: CAC0028_2 COG4624 # Protein_GI_number: 15893326 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 100 437 4 298 371 205 39.0 1e-52 MFKDTMTIHTFGPGENAYGQNGGAYEGNLRKGELRGIIHINKDHCVGCDTCRKFCPTDAI KGGLGAKHEIIDDACLYCGQCLVACPFNAIEQMSFIDEVERVLDAKDRIVVAQPSPAVRV SICEEFGGEPGELSTEQMVNALEALGCVTYDCNSTADQTIIEEGTEFVKKVQYWVLGERG PEVDEQGKHPFPHFTSCCPGWVKYAETYAADMLPHLSTAKSPLQMGGTLAKTWAAKHILK CDPRKVYFVSMTPCTAKIFEASRPEMNTAWRWLIEHKEIPANTPSFQDIDASLTARDLAE LFRRKGINPLLMPKTRKRDSETHPLEVYSGAGTIFGCSGGVMEAALRTAYFALAGKELDN KDIEVVRGHNNAIIEATIPVPVKELGGKIFEVRVCVVNGCNQGIAEVLHRVRVDKNRYHF IEVMNCPGGCVNGGGQPVQPVGTSWLKPTTPLPLRV >gi|319805797|gb|ADMF01000005.1| GENE 16 17038 - 18351 1084 437 aa, chain - ## HITS:1 COG:Cj0363c KEGG:ns NR:ns ## COG: Cj0363c COG0635 # Protein_GI_number: 15791730 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Campylobacter jejuni # 40 429 28 415 448 313 44.0 4e-85 MTNSTYVPKPRELLPDWMVGLTDRVMNYYTKRYLNCEPVILKNPPLPQEGHQYMLYAHVP FCHTLCTYCTFHRFLFKEWKAREYFQNLRREMEYVKALGYDFTAMYVGGGTTTILEDELV KTLELAKKLFPSIKEISCETDPQVIMTPQFRNLQGLVDRMSIGVQSFNDEILKLSDRYEK FGSGEQIYERLQYAQELFPTCNVDMMFGFRGQSLDVLHEDMEKIVKLNPRQVTTYPLMVT SQTRASARAKIAATGLELADQYRVIMDSLENHYRQLTSWTFGRTNDEGFDEYVVDHDEYL GVGSGAFSFLGDSLYVNTFSLRRYAERIAAGNTGVERRRTFDKHSILQYRLLLGLFSHRL SRKYFREVHGVNLDRALMKEMMGLRLSGAIKDDPNDPDRIIVTDAGKFLGLVMMKAFYAG MDHVRAELRAPLKEGDM >gi|319805797|gb|ADMF01000005.1| GENE 17 18516 - 20345 1539 609 aa, chain - ## HITS:1 COG:YPO0537 KEGG:ns NR:ns ## COG: YPO0537 COG1022 # Protein_GI_number: 16120866 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Yersinia pestis # 17 606 14 600 601 280 31.0 6e-75 MGRSSELDGLTTLPELLMQSIQKNGDREALRQYDRATGKWESWTYKELGEHVLAWRRAFA AMGLKPGERIAILMPNGRDHVCADQAALANGLIPVPLHAIDTPGASAFITIDSQAATLVT NKLTRWQQIRATGVPLPDLKNIIITDPGETENKSEGRFHIRSLESILLEGASWTEDLPAG PLEDDLAGIIYTSGTTGRPKGVMLTHRNIVSNVKATLECVSPKVGDTFLSFLPLSHTFER TAGYYLALATGCIIAYNRSVLLLAEDLKTIKPTVIISVPRVYERIYARVQDKLRKSRPIA KKLFDWAVEVGWRDFCRKNHLPVEKSGRSWLDGIVRATLLHKMANTLLSQFGGRLRIAIS GGAALNHKVARTFCGLGLPIIQGYGMTEASPIIAGNCVEFNQPDTVGKPFCNVEIRLGEG NEIQVRAPSIMKGYWHRPEDTAAAFTKDGWLKTGDVGEFNADGMLKIKGRIKEIIVTSTG EKIPPADLESAIETDPLFAQAYIVGENKPYLGLLAVVEPNEWASLAASLNLDPNAPESLA SPAVRTTALKRAKTAAADFPNYALPRAVILTTEPWTIENGLITPTLKLKRGPLSKHFAAE IEKLYAVHG >gi|319805797|gb|ADMF01000005.1| GENE 18 20565 - 21503 689 312 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 6 303 1 300 308 270 48 8e-72 MEDYLMSKYASVLELIGNTPVVRLSRLFPDHDVWLKLERANPGGSVKDRIALQMVLDAVA RGDLKKGGTIIEPTSGNTGVGLAMVSAVLGFRMILVMPESMSVERRLLAQAYGAELVLTP AAQGMKGAVDRALALQKELPDAWVAGQFENPSNPKAHELRTGPEIVADFPEGLDVFVSAF GTGGNVSGISRVLKRAWPTVKTYAVEPKGSPLLTEGHAGPHRIQGIGANFVPGNLDKNVI DQFLDIEDDAAFAYAQAAARQEGLLVGISTGAVLAAVAGLLPTLPKASRVLALNFDTGER YLSVPGFVKTNA >gi|319805797|gb|ADMF01000005.1| GENE 19 21550 - 21885 449 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPWNAAIDVFKNQIEGDRMLATQTSYRGKLFVFTLATCLRTMMRVKAEAQAKEFDLKIPG NSLSQVFEILRGVTMQRWGSTDSWRINMLTRKQRECFALFGMTPIKGTRKD Prediction of potential genes in microbial genomes Time: Sun May 29 19:16:01 2011 Seq name: gi|319805775|gb|ADMF01000006.1| Sutterella wadsworthensis 3_1_45B cont1.6, whole genome shotgun sequence Length of sequence - 23694 bp Number of predicted genes - 23, with homology - 20 Number of transcription units - 13, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 313 198 ## - Prom 339 - 398 7.0 - Term 469 - 515 15.4 2 2 Op 1 . - CDS 578 - 2431 1180 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 2440 - 2485 7.0 3 2 Op 2 . - CDS 2532 - 3995 709 ## gi|88799435|ref|ZP_01115012.1| hypothetical protein MED297_03602 4 3 Tu 1 . + CDS 4108 - 4992 655 ## COG0313 Predicted methyltransferases + Term 5016 - 5045 -0.3 5 4 Tu 1 . + CDS 5070 - 6254 1062 ## COG2326 Uncharacterized conserved protein + Term 6284 - 6317 -0.9 - Term 6374 - 6417 7.3 6 5 Op 1 . - CDS 6445 - 6906 478 ## COG0517 FOG: CBS domain 7 5 Op 2 . - CDS 6987 - 7922 852 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 8 5 Op 3 . - CDS 7934 - 8341 293 ## COG1539 Dihydroneopterin aldolase - Prom 8371 - 8430 4.6 9 6 Tu 1 . + CDS 8416 - 8610 215 ## + Term 8634 - 8679 1.2 10 7 Op 1 1/0.500 - CDS 8613 - 9758 815 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 11 7 Op 2 . - CDS 9780 - 12191 1423 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 12224 - 12283 1.8 12 8 Tu 1 . + CDS 12471 - 12830 144 ## COG0212 5-formyltetrahydrofolate cyclo-ligase - Term 12831 - 12882 9.3 13 9 Op 1 . - CDS 12912 - 14309 1310 ## COG0499 S-adenosylhomocysteine hydrolase - Term 14427 - 14463 3.3 14 9 Op 2 . - CDS 14486 - 15799 1028 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 15861 - 15920 1.5 15 10 Tu 1 . - CDS 15949 - 17130 1485 ## COG0192 S-adenosylmethionine synthetase - Prom 17256 - 17315 2.6 + Prom 17308 - 17367 4.7 16 11 Op 1 2/0.250 + CDS 17422 - 18306 533 ## COG1560 Lauroyl/myristoyl acyltransferase 17 11 Op 2 1/0.500 + CDS 18303 - 19190 434 ## COG1560 Lauroyl/myristoyl acyltransferase 18 11 Op 3 . + CDS 19228 - 20079 473 ## COG0253 Diaminopimelate epimerase 19 11 Op 4 . + CDS 20102 - 21307 571 ## PROTEIN SUPPORTED gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative 20 11 Op 5 . + CDS 21325 - 22326 1009 ## COG0523 Putative GTPases (G3E family) + Term 22388 - 22430 9.0 21 12 Tu 1 . - CDS 22286 - 22411 60 ## + Prom 22375 - 22434 5.8 22 13 Op 1 . + CDS 22462 - 23268 352 ## COG0583 Transcriptional regulator 23 13 Op 2 . + CDS 23310 - 23694 137 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319805775|gb|ADMF01000006.1| GENE 1 1 - 313 198 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRKAAVEPKWNFYLDTNKSTGIQYVQTSYNIWVPEKKQPRLGGKAYVGRLFPDGSVRPS KSFLERFPQYADKKLYYFENQLVDREGYLKLNPNAEAQWEELRE >gi|319805775|gb|ADMF01000006.1| GENE 2 578 - 2431 1180 617 aa, chain - ## HITS:1 COG:RSc0975 KEGG:ns NR:ns ## COG: RSc0975 COG0488 # Protein_GI_number: 17545694 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Ralstonia solanacearum # 1 612 1 633 636 577 50.0 1e-164 MALITLIDAHLAYGDLPLLDEANISIEPGERVGLIGRNGTGKSSLLSVLAGKTMLDDGQL QRMDGLTIHYVEQEPQLPDAPTLKESLILRGKLDETTDEREKWRILAKLDENLSHFELNP NADPKLTSGGEKKRAALALAFTLAPQLLLLDEPTNHLDMRAIRLLEARSQDELKNQRSLV VITHDRAFLDKVATRIVELDRGVLRSYPGNFAAYETRKEEELAAEELERRRFDKFWAQEE VWIRKGIEARRTRNEGRVKRLEQLRRERAARRDQMGSIRMSIDAGEKSGKIVAEVKGLSK SFGDCVIVKDLDFTLMRGDRLGLIGRNGAGKSTLIKLLLGKIQPDAGTVKLGTNIKLAYF DQLREQLDLTKTVAETISPGSDWVEIGGERKHIIAYLGDFLFPPRRANVPVSSLSGGERN RLLLARLFALPANLLVLDEPTNDLDIDSLELLEQTLAVYPGTIILVSHDRRFLDNVVTEV LAPEGDGKWREYVGGYTEWFTQRQQENDPFAAAKTEKKAEKTEKPAKNEKPRDVIPQKIK LSWREARELEALPEKLEAMEKEQASIINAMSAFDYHSKSVEDIKADKLRLEELEKSIADG WTRWEALSEKESLSTGK >gi|319805775|gb|ADMF01000006.1| GENE 3 2532 - 3995 709 487 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|88799435|ref|ZP_01115012.1| ## NR: gi|88799435|ref|ZP_01115012.1| hypothetical protein MED297_03602 [Reinekea sp. MED297] # 16 417 236 603 607 70 24.0 4e-10 MHAVETLGTAAGEAPSISAASPVSSLRPLRIAMLMPPDDSPFLAAARIVANGLAASNAHI DGPQDRSAEIFLVESSSQTASLDAALDAALVSGADIVVGPIERSAVEMLARKKTLPLPVL ALNVPDNTDLSAVPQNLGLISISTEYEAEWIAQAAVAALPHSINNLSRPKIAVIAGSAAW QMRARDAFENVLAHAQIDYEVISFSPEILDDLQTKFEPTLSPEEAAQFDQELREALAKAE SSQQRKLITKRVHAARRARVTQSEPPFQAALLALSAQEAALVRNRFPRGTRIWGTSAINP GDPDLSSAATTLSYDLDGVAFPECPLVVQLKPADFEARFGTSMPYSLSAKRLFALGVDAR TTALAWSQGRSLQGEAGETGTLTFDRSHSPLVERTPQVVVVQQGHLLQIPRELAVRTVLP TIEPPKPTEPIAMPTVKEELNAAHREDVKGVVVNDLGADPDPTPMIPKTISPASSPSPAA SGISITQ >gi|319805775|gb|ADMF01000006.1| GENE 4 4108 - 4992 655 294 aa, chain + ## HITS:1 COG:NMA0342 KEGG:ns NR:ns ## COG: NMA0342 COG0313 # Protein_GI_number: 15793352 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis Z2491 # 13 278 15 282 291 214 47.0 2e-55 MLAAGLPDQELPAAALYVVGLPIGNMGDITLRALWVLSSVDAVAAEDTRETRKLLERFGI DTRLLSVREHNERHGAEQIDALLAEGQRVALVTDAGTPAVSDPGARAVEYLRRVGRRVIP VPGASAAITALSAAGLLGTGFDFIGFLPPQPKARHQSAAELAHRKRPFVLYEAPHRILAL LEDLGAALTPERRIVVARELTKKFETITSLTAADLSEWIKTHEPRGEYVVLVDEEPMKEE TLSVQEEAWLKALAPELPSSRLAAIAAKLTGRPRQEIYTWLTVMRKAQETDAAE >gi|319805775|gb|ADMF01000006.1| GENE 5 5070 - 6254 1062 394 aa, chain + ## HITS:1 COG:PA0141 KEGG:ns NR:ns ## COG: PA0141 COG2326 # Protein_GI_number: 15595339 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 110 364 25 279 298 356 67.0 5e-98 MANNEKTDESVKRKSHETREAVLNDEHIDRAPRFQNVQDVLEHIKSGKTERAYRRKQDLI EDILSGQAREDREAILSQLLAELTTKSKKSRKERDLEENRLNPDWAKGAYPYVNRMRRKN YEEQKFRLQVELLKLQAWVKETGQKIIVIFEGRDAAGKGGTITRFMEHLNPRGARVVALN KPTVEESGQWYFQRYVTHLPTKGEMVFFDRSWYNRAGVERVMKFCTDAEYYEFMREVPGF ERNLVRSGTYVIKFWFSVSQKEQQRRFRERQVSPLKRWKLSPIDLASLDKWDDYTRAKEA MFFGTDTPEAPWTVIKSDDKKRARLNAMRYVLHLIPYAERDLKAIGPIDPLIVGRASTMF ETAEYAAAPHILAGELVRPNMPPMLPGPKKKKKK >gi|319805775|gb|ADMF01000006.1| GENE 6 6445 - 6906 478 153 aa, chain - ## HITS:1 COG:MK0525 KEGG:ns NR:ns ## COG: MK0525 COG0517 # Protein_GI_number: 20093963 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Methanopyrus kandleri AV19 # 4 126 2 124 196 85 38.0 4e-17 MRTRSLKVIDMAVHKVAIITPEKSIRESARQMRVEHVGSLVVVDQDGKPIGMLTDRDITI EGVARGVDVDQTTVRDLMTAPVVTATESEGMVTALARMREFGIRRLPIIDSEGKLVGVVT NSNLIKELSELLDGLVRNISSSKTREVALRSDI >gi|319805775|gb|ADMF01000006.1| GENE 7 6987 - 7922 852 311 aa, chain - ## HITS:1 COG:VC1432 KEGG:ns NR:ns ## COG: VC1432 COG0037 # Protein_GI_number: 15641443 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Vibrio cholerae # 45 290 18 263 310 292 53.0 5e-79 MTDVIPLIPEAPATFADDAADIGALAAQGETPPNERNRKSVSQKKLEKRIVRLTGQAITD FDMIREGDKIMVAMSGGKDSYVLLDTLKILQARAPIHFDLLAVNVHQHIPEFPLEALKKH LEHSGIPFHIEDQDTNSLIQKLIPEGKNVCSLCARLRRGILYRVARETGCNRIALGHHMD DIVSTLLLNLFYGGRLKSMPPALKNDRGDCVVIRPLAYVREAETAKMAKIRGYPLAAKGI CGAGENLKRKEIKELMQRWDREFPGRIYNIFMSLTRVSPSHLLDRSIYDFTNFAPIYGTP GSEASGESEDE >gi|319805775|gb|ADMF01000006.1| GENE 8 7934 - 8341 293 135 aa, chain - ## HITS:1 COG:RSc0157 KEGG:ns NR:ns ## COG: RSc0157 COG1539 # Protein_GI_number: 17544876 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Ralstonia solanacearum # 14 128 13 127 130 98 40.0 3e-21 MSTLPSPESLRFSCRRIFLKNLRLTCRIGAYETERSASQSVVFNADIWVRFSASSSQRDA LEDVLNYDLAVEIFREESSRGHIDLQETLVDRIAERLSNLPGVELIRISSEKTEAYDDAD AIGVEVWRSGSPLLT >gi|319805775|gb|ADMF01000006.1| GENE 9 8416 - 8610 215 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRWALVIFIILLLLITAMPSLKRFGLGRLPGDIHFRILGREIEIPFMSTILLAVFALVLG KLLF >gi|319805775|gb|ADMF01000006.1| GENE 10 8613 - 9758 815 381 aa, chain - ## HITS:1 COG:NMA1410 KEGG:ns NR:ns ## COG: NMA1410 COG0617 # Protein_GI_number: 15794322 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Neisseria meningitidis Z2491 # 1 317 1 336 417 268 49.0 2e-71 MKIFPVGGYVRDMLLRKRGFKLPEGDRDWVVIGETPEAMIKRGYLPVGGDFPVFLHPRSH EEYALARTERKTAPGYHGFIFHASPDVTLEEDLARRDLTINAMALAPDGFIIDPFGGQHD LAAGILRHVSPAFAEDPVRILRIARFAARLPSFSIAPETMALMRRMVDSGEADALVPERV LAEFTKGLRTATPCRMLDILTECGFCQRLYPELRLSAQLRGRLHRARLANFPVDLLLAVL ASGIEGEAKNLKAPTPGRQFLARIRASAQAQEFAQILTGGTTGGIEKLRNITTFEDTIEF LRQVDALRKPERAKLLLALRNAVLQPPEGSAETIKLAQTMRAWTSVDAGAAAQTAASPKE IAQKVLTARVQAAADAWRAEA >gi|319805775|gb|ADMF01000006.1| GENE 11 9780 - 12191 1423 803 aa, chain - ## HITS:1 COG:RSc0088 KEGG:ns NR:ns ## COG: RSc0088 COG0741 # Protein_GI_number: 17544807 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Ralstonia solanacearum # 215 803 103 650 650 259 33.0 2e-68 MRRFALPCLALSFAAALHAAEDEHSWTPLRDGADKAIQAAAAFETAQRKQTTSPRSQLIP HGLVTISIDERLQALRASQDAENGIPLEEESSVGSVDPAVLMRNVEAALDAVASPSLIPE ENAPSAGEAADAAGRAAAELIAAPVKDPLDDALLAPPPEPLDYVFLEAKLCFDQGRLDDL EEMLPLFEHHELSGYPALWALILKLKKFPDDPVVDQDFRRFIDLHEGEYLAENARTQYLK LRGEKLNAADFDLFFKGLVWNQTDPVIEAWQAYYTLESAQAENNQSKIAAALLKAKVLYR DSKAVTDPALMKLGDRISEADRTWLWTRVMILLQKNRMTETKRVLETLPRPELPAPMKEL RSIIDEPTLWLRRQKNLGNLPARLAVFASVRIAHLRPADAARIAQAAVDPKANAFWRSLV WSRIGFTATTQLNPKASSWYAKAGSALQQFPLAVVDAQQLAAWHARALIRDGSWYGLSKV IDAMPAELKREEVWTYWCGRALASRGLKTDAQTAFTSIAHRTTFYGKLAADELGRSYGFS KPPKAMPRQVEIDKWAENTAIQRARSLYRMSLYREGHREWNWAMRGITPQESLALAAYAR QTRLIHRMINTSLKSGDQTVVIEQRFPRPHAALIRIVSEAQSLPSAWVYGLIRQESRFIP AVSSAVGARGLMQIMPATAKWMARHLGIDSFEQKSLTELEMNLVLGTAYLRMLYLDMEES YVLATAAYNAGPNRARIWRAAVRNSMEAAAFIETIPYFETREYVKNVLANMHTYAMLTGE LDGRFAKLLGRVEPGRSKAADLP >gi|319805775|gb|ADMF01000006.1| GENE 12 12471 - 12830 144 119 aa, chain + ## HITS:1 COG:RSc0089 KEGG:ns NR:ns ## COG: RSc0089 COG0212 # Protein_GI_number: 17544808 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Ralstonia solanacearum # 16 116 98 199 201 83 42.0 8e-17 MNRTLALPWCLDSSASVMVYRIWHPGEALVPDAAGIPAAAGQQVIPDILLVPCLGWSAKH FRLGYGGGYFDRYLAALAKNGIHPQVVGIAYAACKVDDALFDSLDLPMDFVITECGEME >gi|319805775|gb|ADMF01000006.1| GENE 13 12912 - 14309 1310 465 aa, chain - ## HITS:1 COG:RSc0093 KEGG:ns NR:ns ## COG: RSc0093 COG0499 # Protein_GI_number: 17544812 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylhomocysteine hydrolase # Organism: Ralstonia solanacearum # 4 465 9 474 474 733 76.0 0 MDANSYVIADLNLADWGRKEIQIAEVEMPGLMAIRHEYASAQPLKGARISGSLHMTIQTA VLIETLTALGAEVRWASCNIFSTQDHAAAAIVKDGVSVFAKKGETIEEYWEFTHRIFEWP DGGFSNMILDDGGDATLLLHLGSRAESDRNVIANPTNDEEHALFAAIAKHLDSDPHWYSK RLEKILGVSEETTTGVHRLYQMHERGELKIPAINVNDSVTKSKFDNLYGCRESLVDGIKR ATDVMVAGKVAVVVGYGDVGKGCAQALRALAAQVWVVEIDPICALQAAMEGYRVVTMDFA KDKADIFVTCTGNVRVITHEHMIAMKNEAIVCNIGHFDSEIDVASMRQYPWENIKPQVDH ITLPSGNRIILLAEGRLVNLGCATGHPSYVMSSSFANQTLAQIELFAHHDCYPVGVYILP KHLDEKVARLQLTNLNAVLSELTDEQAAYIGVKKEGPYKPDNYRY >gi|319805775|gb|ADMF01000006.1| GENE 14 14486 - 15799 1028 437 aa, chain - ## HITS:1 COG:PA4439 KEGG:ns NR:ns ## COG: PA4439 COG0180 # Protein_GI_number: 15599635 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 6 401 4 397 448 451 59.0 1e-127 MTRKKRVLTGINTTGTLHIGNYVGAIRPAIQDSRNPDVESFFFLADLHALIKCQDPTRIE RSRMQIAATWLAAGLDPDHVTFYRQSDIPEIPLLCWMFDCVMSKGLLNRAHAYKAAVDAA TAAGRDPDADVSMGLFSYPVLMAADILMFNADEVPVGHDQLQHLEMARDAASRFNNLYCS PDKPFFVMPQATGGSALEVLPGLDGRKMSKSYNNVIPLFEGGRAALDAAIARIVTDSRLP GEPKDPDSSSLTVIYNAFATPSEQIAFREALKDGLGWGEAKKQLADKIDAEIGPMRSRYD ELMTHPNVLEDILQAGAQKARALSAPFMHELKLAVGLKAFAAPEAAAEKAKNAKKALPVF KQYREQDGSFRFKLVAVDGTELFISDAFASGRDAGSWVSRLKKEGAAAFDEAPVTLGGGI TKEMVETALAAFREDED >gi|319805775|gb|ADMF01000006.1| GENE 15 15949 - 17130 1485 393 aa, chain - ## HITS:1 COG:RSc0134 KEGG:ns NR:ns ## COG: RSc0134 COG0192 # Protein_GI_number: 17544853 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Ralstonia solanacearum # 1 393 1 388 396 587 74.0 1e-167 MSSEFLFTSESVSEGHPDKVADQISDAVLDACIAGDPMSRVAAETLCTTGLVVLAGEITT GANVDYIGLTRDVLKRIGYDNTEYGIDHRGCSVLVGYDKQSQDIAQGVDHAMDDELNLGA GDQGLMFGYACTETPTLMPAPIYYAHRLMERQSIVRKNGTLPFLRPDAKSQVTLRYRDGK PVGADTIVISSQHAPEMSDGTRMKPEFTEAIIEEIIRPVMPKNWLEGTKFLINPTGRFVV GGPQGDCGLTGRKIIVDTYGGYCPHGGGAFSGKDPTKVDRSAAYACRYVAKNVVAAGLAK TCLVQVAYAIGVAEPMNITIITNGTGVISDEKIAELVRRNFDLRPRGIIKMLDLRRPIYS KTAAYGHFGREEPDFTWERTDKAAILRAEAGLS >gi|319805775|gb|ADMF01000006.1| GENE 16 17422 - 18306 533 294 aa, chain + ## HITS:1 COG:RSc0135 KEGG:ns NR:ns ## COG: RSc0135 COG1560 # Protein_GI_number: 17544854 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Ralstonia solanacearum # 1 286 24 304 305 162 35.0 1e-39 MHWLLTLVAKLPLGFLQGFGACIGELVFWLSPGYRRRTRDNLRHAGYNEAKFFTKVGRNA GRQSMESIWVWYRPTKAVLSRVKISPQAEHIIGSAMTSGRPIVFLTPHVGCFEILPVWLA GTHYEKTGRRITILYRPPRKEILRAVVGEARQAPGIEAVPTNLAGVKHVIRSLRNGNTFG ALPDQVPSNGEGVWADFFGRPAYTMTLPVRVAKQFNAVRIFAWGVREKNGWRIEAEEWSS KLTGDMARDVEDMNRMIEGIIRRMPEQYAWSYNRYKRPQGAPPPHAPRSKGNQK >gi|319805775|gb|ADMF01000006.1| GENE 17 18303 - 19190 434 295 aa, chain + ## HITS:1 COG:NMA1630 KEGG:ns NR:ns ## COG: NMA1630 COG1560 # Protein_GI_number: 15794524 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis Z2491 # 19 295 11 289 289 182 35.0 8e-46 MSSLNLLLSRGWVQLVKSFRYLSMPMRWRLARAAAAVLWVAVPKRRHVILRNLELCFPEL SRTERESLAKRVYVRLARAAIDHGTLWCGSAEDVRSLVHFHGIEHLLNPENRPVIVVSPH FAGLDAAGIALNTYVRGVSLYQTQSNPVWDEALLKGRLRFSNPVLIAKSGDSDLRRVMRE MKTGLPFYYLPDMDHGRRNSIFVPFFGVEAATLPMVSRLARVMQAKVLWCIATMTETGYQ VEISAAWENFPTNDPHADTCRLNAELETFIRQQPDQYLWVHRRFKTRPEGERSLY >gi|319805775|gb|ADMF01000006.1| GENE 18 19228 - 20079 473 283 aa, chain + ## HITS:1 COG:RSc0137 KEGG:ns NR:ns ## COG: RSc0137 COG0253 # Protein_GI_number: 17544856 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Ralstonia solanacearum # 1 282 8 284 292 222 43.0 7e-58 MQGAGNDFVVLDGIRQSINPTPKLIRALADRRFGIGADQVLLLEAAKHEGEPLRYRIFNN TGGEVEQCGNGARCIGRFALEAGYAAGDRVDFETMKGRICVRAEPDGRMVVDMGVPRLQP AEVPFAPEADSEMSKRCEHSADVWTIFCPPLSCDIEFTAVGMGNPHATIFVDGVDSFPVE PVARFLQTSAIFPEDVNVGFVERIDSRTAKIRVYERGAGETLACGTGTSAAMASGCLRGF FDDRVEFVARGGRIACAWRGPATSLYLIGPAEVVFVGTISLDI >gi|319805775|gb|ADMF01000006.1| GENE 19 20102 - 21307 571 401 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|223476703|ref|YP_002580685.1| ribosomal protein L11 methyltransferase, putative [Thermococcus barophilus MP] # 1 399 1 392 396 224 35 4e-58 MAELILKKGKEKSLLRRHPWVYDTAVERAVGNPKAGDTVKVVAKDGRFLAWAAYSPVSAL RARCWSFREDEVIDDIWFEKKIREAVAARAGLLERTNARRILFGEADGLPGLIVDQYGDW LVTQFQAAGVEAHRELIGRLLLEVTGARGVYDRSDAATRRREGLEVRSEVLVGETAPDVI EIVEDGVKYGVDVRVGHKTGFYIDQRESRLSAQRAAEEFRRRHGRGLRALNCFCYTGGFS LALLKGGAEEVVSVDSSEEALAMARANAERNGFTNRAEWLCEDVFTCLRRLRDAGEKFDL VILDPPKFASSHYHVDRAARAYKDINLNGLKLLGPGGELFTFSCSGAIDVDLFQKIVAGA VIDSGVTAWATGRFGAGEDHPLLMTCPEGEYLKGLRLAVRP >gi|319805775|gb|ADMF01000006.1| GENE 20 21325 - 22326 1009 333 aa, chain + ## HITS:1 COG:RSc0047 KEGG:ns NR:ns ## COG: RSc0047 COG0523 # Protein_GI_number: 17544766 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Ralstonia solanacearum # 11 331 5 362 362 354 50.0 2e-97 MNVEEPQEPEIPVTILTGFLGAGKTTLLNRILKENHNHKIAIIENEFGTENVDNDLLVTE NNEQIVSMNNGCVCCTIRGDLSRILTKLRLQRDKGEIDFDYIVLETSGVANPGPVAQTFF MDDAIAPFFRLDGVVTVVDAKYGPKTLDDEAAARDQVGFADRILVSKCDLVTPEELAELE ARLRSMNARAPMRRVDMGNCPVDVVLDIAGFNMNDVLDVDPNFFVNDHHLHHHNDDIHTF VYETETPFDPQKLDRYIGSLTAVYGQDMLRYKGILYFAGVDRRVVFQGVHMLAVSDVMGP WGDVKPFSKLVFIGRNLPEEAIARGLDTCLAKA >gi|319805775|gb|ADMF01000006.1| GENE 21 22286 - 22411 60 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYRKTHEDYIPNLTSKALSQRLKASSSWLMPWPGKYQARAQ >gi|319805775|gb|ADMF01000006.1| GENE 22 22462 - 23268 352 268 aa, chain + ## HITS:1 COG:RSp0997 KEGG:ns NR:ns ## COG: RSp0997 COG0583 # Protein_GI_number: 17549218 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 13 226 14 231 306 69 25.0 7e-12 MKPSQNLLSWQVFVATCRTRSISQAAVLLDIDLPKASRLLSALETELGEPLFDKSHRPIQ PTPRAAELQRAVEPLVAGFQAALEPKAEPHERFTIRFAAPIELAQEYFSDKLFQYSELFH DVEFAVLPEVGPDDIRRGDVDVAVLNRRPADPSGLIIRNYNNSTTVPLATPEYLRRHGTP LSPADLKMHEGLLLKAYNDDTVTQQLFFGRERSEPLEWKRTFVTHDQLTLKRLLLEHPKS RSKPSRYSSENDVLIEKSVKYTDFFCFQ >gi|319805775|gb|ADMF01000006.1| GENE 23 23310 - 23694 137 128 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 128 1 126 570 152 57.0 4e-36 MGRPLTGKTHVGIRRETRSNGDVYVYERVTGYDPKTQKTKTLSTRLLGKILAGSTEMIPT RPKKKRSEVIEAPVQAVRTHVGLQKILEWAGHESGIDADLQRSFEIGDALKLSSIARYWV ATDGDTLP Prediction of potential genes in microbial genomes Time: Sun May 29 19:17:16 2011 Seq name: gi|319805658|gb|ADMF01000007.1| Sutterella wadsworthensis 3_1_45B cont1.7, whole genome shotgun sequence Length of sequence - 122058 bp Number of predicted genes - 115, with homology - 110 Number of transcription units - 48, operones - 26 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 479 447 ## Ppha_0277 transposase IS4 family protein 2 1 Op 2 . + CDS 483 - 794 106 ## + Term 888 - 913 -0.8 3 2 Op 1 . - CDS 791 - 3112 1013 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 4 2 Op 2 6/0.053 - CDS 3109 - 3753 281 ## COG1145 Ferredoxin 5 2 Op 3 . - CDS 3777 - 4463 707 ## COG3381 Uncharacterized component of anaerobic dehydrogenases 6 2 Op 4 . - CDS 4514 - 5344 495 ## gi|302860807|gb|EFL83884.1| hypothetical protein HMPREF0189_00962 7 2 Op 5 16/0.000 - CDS 5362 - 5955 374 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 8 2 Op 6 . - CDS 5971 - 8652 1826 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Prom 9269 - 9328 2.0 9 3 Op 1 . + CDS 9418 - 9834 575 ## COG1734 DnaK suppressor protein 10 3 Op 2 . + CDS 9916 - 10641 330 ## COG1011 Predicted hydrolase (HAD superfamily) 11 3 Op 3 . + CDS 10657 - 12465 1139 ## COG0616 Periplasmic serine proteases (ClpP class) - Term 12515 - 12550 -0.3 12 4 Tu 1 1/0.211 - CDS 12613 - 13386 464 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 - Term 13397 - 13444 3.2 13 5 Op 1 8/0.000 - CDS 13468 - 15003 1725 ## COG0793 Periplasmic protease 14 5 Op 2 . - CDS 15073 - 16323 849 ## COG4942 Membrane-bound metallopeptidase - Prom 16402 - 16461 2.9 15 6 Tu 1 . + CDS 16455 - 16859 463 ## COG0607 Rhodanese-related sulfurtransferase 16 7 Tu 1 . + CDS 16980 - 17522 807 ## COG1952 Preprotein translocase subunit SecB + Term 17546 - 17593 5.2 + Prom 17641 - 17700 3.8 17 8 Tu 1 . + CDS 17757 - 18419 646 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 18430 - 18482 10.2 18 9 Op 1 . - CDS 18494 - 18964 390 ## COG0219 Predicted rRNA methylase (SpoU class) - Term 18976 - 19006 5.0 19 9 Op 2 7/0.053 - CDS 19038 - 19838 653 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 19999 - 20058 2.3 20 10 Op 1 28/0.000 - CDS 20276 - 21184 839 ## COG2177 Cell division protein 21 10 Op 2 . - CDS 21181 - 21876 274 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 22 10 Op 3 . - CDS 21889 - 23358 1206 ## COG0248 Exopolyphosphatase 23 10 Op 4 . - CDS 23409 - 24341 680 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 - Prom 24391 - 24450 2.2 + Prom 24118 - 24177 2.0 24 11 Op 1 14/0.000 + CDS 24347 - 25093 409 ## COG0742 N6-adenine-specific methylase 25 11 Op 2 . + CDS 25171 - 25662 282 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 - Term 25668 - 25705 -1.0 26 12 Tu 1 . - CDS 25718 - 27904 1585 ## 27 13 Op 1 11/0.000 - CDS 28035 - 29591 449 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 - Prom 29672 - 29731 2.2 - Term 29674 - 29714 7.2 28 13 Op 2 . - CDS 29780 - 30343 701 ## COG0450 Peroxiredoxin - Prom 30413 - 30472 5.7 29 14 Tu 1 . - CDS 30495 - 30863 390 ## COG1396 Predicted transcriptional regulators - Prom 30889 - 30948 2.0 - Term 30913 - 30962 7.2 30 15 Tu 1 . - CDS 30990 - 32084 1207 ## COG0012 Predicted GTPase, probable translation factor - Prom 32190 - 32249 4.6 - Term 32179 - 32207 -0.9 31 16 Op 1 . - CDS 32258 - 32779 264 ## COG1683 Uncharacterized conserved protein 32 16 Op 2 . - CDS 32784 - 33437 554 ## COG0193 Peptidyl-tRNA hydrolase 33 16 Op 3 . - CDS 33457 - 35262 1870 ## COG0513 Superfamily II DNA and RNA helicases - Prom 35432 - 35491 1.7 - Term 35411 - 35450 2.1 34 17 Op 1 9/0.000 - CDS 35588 - 36232 556 ## PROTEIN SUPPORTED gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25P - Term 36264 - 36308 9.4 35 17 Op 2 13/0.000 - CDS 36315 - 37277 1020 ## COG0462 Phosphoribosylpyrophosphate synthetase - TRNA 37390 - 37464 77.0 # Gln TTG 0 0 36 17 Op 3 . - CDS 37455 - 38399 321 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 37 17 Op 4 . - CDS 38396 - 38938 462 ## 38 17 Op 5 2/0.158 - CDS 38935 - 40701 1689 ## COG0457 FOG: TPR repeat - Prom 40758 - 40817 4.0 39 18 Tu 1 . - CDS 40819 - 42234 938 ## COG0642 Signal transduction histidine kinase - Prom 42266 - 42325 2.0 40 19 Tu 1 . + CDS 42341 - 43444 324 ## COG1194 A/G-specific DNA glycosylase + Term 43632 - 43667 -0.3 41 20 Op 1 8/0.000 - CDS 43432 - 44322 652 ## COG1660 Predicted P-loop-containing kinase 42 20 Op 2 1/0.211 - CDS 44350 - 44823 271 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 43 20 Op 3 17/0.000 - CDS 44858 - 46303 720 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 44 20 Op 4 19/0.000 - CDS 46330 - 47106 302 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 45 20 Op 5 . - CDS 47142 - 47738 427 ## COG1934 Uncharacterized protein conserved in bacteria 46 20 Op 6 . - CDS 47746 - 48438 614 ## bglu_1g31180 hypothetical protein 47 20 Op 7 13/0.000 - CDS 48441 - 48974 467 ## COG1778 Low specificity phosphatase (HAD superfamily) 48 20 Op 8 . - CDS 48974 - 49966 727 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation - Prom 50052 - 50111 3.2 49 21 Op 1 34/0.000 - CDS 50163 - 50897 577 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 50 21 Op 2 17/0.000 - CDS 50950 - 51633 827 ## COG0765 ABC-type amino acid transport system, permease component 51 21 Op 3 31/0.000 - CDS 51644 - 52378 779 ## COG0765 ABC-type amino acid transport system, permease component - Prom 52485 - 52544 2.4 - Term 52464 - 52519 10.4 52 21 Op 4 . - CDS 52549 - 53451 1155 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 53559 - 53618 1.9 - Term 53590 - 53624 3.5 53 22 Op 1 2/0.158 - CDS 53676 - 54452 663 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 54 22 Op 2 . - CDS 54478 - 57207 1212 ## COG1042 Acyl-CoA synthetase (NDP forming) - Prom 57241 - 57300 3.0 55 23 Op 1 . + CDS 57347 - 57487 60 ## 56 23 Op 2 . + CDS 57444 - 58538 920 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 57 23 Op 3 . + CDS 58525 - 59211 602 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 58 23 Op 4 . + CDS 59208 - 59465 250 ## Mmol_0172 hypothetical protein 59 23 Op 5 . + CDS 59483 - 59983 359 ## RSc2071 hypothetical protein 60 23 Op 6 . + CDS 59987 - 61018 380 ## COG4643 Uncharacterized protein conserved in bacteria 61 24 Tu 1 . - CDS 61013 - 61891 907 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 61907 - 61945 5.9 62 25 Tu 1 . - CDS 61998 - 63803 2164 ## COG0173 Aspartyl-tRNA synthetase - Prom 63980 - 64039 2.3 63 26 Tu 1 1/0.211 - CDS 64134 - 64787 551 ## COG2928 Uncharacterized conserved protein - Term 64812 - 64854 6.0 64 27 Tu 1 . - CDS 64889 - 65113 237 ## COG2331 Uncharacterized protein conserved in bacteria - Prom 65161 - 65220 4.4 - Term 65231 - 65268 8.7 65 28 Tu 1 . - CDS 65312 - 67360 2049 ## COG0480 Translation elongation factors (GTPases) - Prom 67607 - 67666 6.7 - Term 67616 - 67656 3.0 66 29 Tu 1 . - CDS 67686 - 68387 572 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 68412 - 68471 4.0 + Prom 68447 - 68506 2.6 67 30 Op 1 13/0.000 + CDS 68625 - 70049 344 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 68 30 Op 2 24/0.000 + CDS 70064 - 71365 936 ## COG0845 Membrane-fusion protein 69 30 Op 3 36/0.000 + CDS 71376 - 72098 331 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 70 30 Op 4 . + CDS 72095 - 73303 382 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 + Term 73329 - 73364 3.2 - Term 73312 - 73356 7.2 71 31 Op 1 4/0.158 - CDS 73403 - 73909 432 ## COG0629 Single-stranded DNA-binding protein 72 31 Op 2 . - CDS 73946 - 75160 882 ## COG0477 Permeases of the major facilitator superfamily 73 32 Tu 1 . + CDS 75081 - 75245 130 ## 74 33 Tu 1 . + CDS 75842 - 78067 1395 ## COG0178 Excinuclease ATPase subunit + Term 78200 - 78270 10.3 75 34 Tu 1 . - CDS 78287 - 79306 763 ## COG1087 UDP-glucose 4-epimerase - Prom 79331 - 79390 2.4 + Prom 79257 - 79316 3.6 76 35 Tu 1 . + CDS 79443 - 81713 1246 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily + Term 81790 - 81816 -0.6 - Term 81710 - 81750 6.5 77 36 Op 1 . - CDS 81770 - 82243 461 ## Rmar_1659 hypothetical protein 78 36 Op 2 . - CDS 82255 - 82710 393 ## Rmar_1659 hypothetical protein 79 36 Op 3 . - CDS 82758 - 83276 466 ## COG2606 Uncharacterized conserved protein - Prom 83362 - 83421 2.6 + Prom 83406 - 83465 2.1 80 37 Op 1 . + CDS 83528 - 83953 250 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 81 37 Op 2 . + CDS 83995 - 84843 589 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 84885 - 84924 7.1 82 38 Tu 1 . - CDS 84935 - 85801 492 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases - Prom 85900 - 85959 1.8 + Prom 85823 - 85882 1.8 83 39 Tu 1 . + CDS 85967 - 86806 796 ## COG1210 UDP-glucose pyrophosphorylase + Term 86833 - 86874 4.3 - Term 86821 - 86862 5.2 84 40 Op 1 . - CDS 86907 - 87779 712 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 85 40 Op 2 . - CDS 87875 - 88369 462 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 86 40 Op 3 4/0.158 - CDS 88390 - 88956 312 ## COG0241 Histidinol phosphatase and related phosphatases 87 40 Op 4 4/0.158 - CDS 88956 - 89957 1144 ## COG0451 Nucleoside-diphosphate-sugar epimerases 88 40 Op 5 . - CDS 90048 - 90971 1035 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase - Prom 91146 - 91205 2.2 + Prom 91181 - 91240 4.6 89 41 Op 1 . + CDS 91318 - 92703 1334 ## COG1109 Phosphomannomutase 90 41 Op 2 . + CDS 92712 - 94157 973 ## COG0166 Glucose-6-phosphate isomerase 91 41 Op 3 2/0.158 + CDS 94187 - 95122 512 ## COG0859 ADP-heptose:LPS heptosyltransferase 92 41 Op 4 . + CDS 95128 - 96441 681 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 93 41 Op 5 . + CDS 96357 - 97226 501 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Term 97393 - 97432 4.2 + TRNA 97307 - 97383 88.0 # Met CAT 0 0 + Prom 97309 - 97368 80.2 94 42 Op 1 10/0.000 + CDS 97547 - 98875 444 ## PROTEIN SUPPORTED gi|229870452|ref|ZP_04490046.1| SSU ribosomal protein S12P methylthiotransferase 95 42 Op 2 17/0.000 + CDS 98910 - 99995 807 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 96 42 Op 3 11/0.000 + CDS 99988 - 100446 514 ## COG0319 Predicted metal-dependent hydrolase 97 42 Op 4 9/0.000 + CDS 100491 - 101354 581 ## COG4535 Putative Mg2+ and Co2+ transporter CorC 98 42 Op 5 1/0.211 + CDS 101372 - 102976 1069 ## COG0815 Apolipoprotein N-acyltransferase + Prom 102987 - 103046 2.7 99 43 Op 1 19/0.000 + CDS 103126 - 104037 1145 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 100 43 Op 2 . + CDS 104063 - 106153 2456 ## COG0751 Glycyl-tRNA synthetase, beta subunit 101 44 Op 1 3/0.158 + CDS 106310 - 107047 485 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 102 44 Op 2 . + CDS 107063 - 107794 530 ## COG1451 Predicted metal-dependent hydrolase + Term 107807 - 107848 6.1 103 45 Op 1 12/0.000 - CDS 107846 - 108655 566 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 104 45 Op 2 13/0.000 - CDS 108624 - 109586 445 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 - Term 109598 - 109638 4.9 105 45 Op 3 16/0.000 - CDS 109673 - 111064 1355 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 106 45 Op 4 . - CDS 111048 - 113366 2258 ## COG1452 Organic solvent tolerance protein OstA - Prom 113525 - 113584 2.7 + Prom 113479 - 113538 3.6 107 46 Op 1 6/0.053 + CDS 113605 - 114615 804 ## COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases 108 46 Op 2 . + CDS 114628 - 115350 538 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 109 46 Op 3 12/0.000 + CDS 115347 - 116318 623 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 110 46 Op 4 2/0.158 + CDS 116372 - 116749 279 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator 111 46 Op 5 . + CDS 116753 - 118306 1953 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 118380 - 118430 8.1 112 47 Op 1 20/0.000 + CDS 118442 - 119746 985 ## COG0823 Periplasmic component of the Tol biopolymer transport system 113 47 Op 2 13/0.000 + CDS 119793 - 120323 682 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 120363 - 120411 9.3 114 47 Op 3 . + CDS 120417 - 121163 622 ## COG1729 Uncharacterized protein conserved in bacteria 115 48 Tu 1 . + CDS 121475 - 122057 779 ## COG0281 Malic enzyme Predicted protein(s) >gi|319805658|gb|ADMF01000007.1| GENE 1 3 - 479 447 158 aa, chain + ## HITS:1 COG:no KEGG:Ppha_0277 NR:ns ## KEGG: Ppha_0277 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 2 157 414 568 570 166 52.0 3e-40 TGVEEAKRYWGYFVLVSNEIKDPFDALKAYRSREKIEELFATYKDSFDGRKPRTWYPENL YGRQFAQFVGLGYHCFLAKRILDVKKALSEKETEGKTKEELSLEAKLLAWLNQHSLIQIL DWFRCVDYVAATGNASASKWTTETTRRDQLFLKMLGVK >gi|319805658|gb|ADMF01000007.1| GENE 2 483 - 794 106 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGALDDFKVEHHGITVDLSILHIGEEIRRGIVVPLLEGWTKTPWCMCLVNRREDELRSAK LRDFVLWMTATAREDSARSANECRQIIEDAYLRSKRVDLKRGS >gi|319805658|gb|ADMF01000007.1| GENE 3 791 - 3112 1013 773 aa, chain - ## HITS:1 COG:YPO0342_2 KEGG:ns NR:ns ## COG: YPO0342_2 COG0493 # Protein_GI_number: 16120677 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Yersinia pestis # 328 764 4 464 471 323 40.0 9e-88 MKRTRLLRMLCAFAFILLVFFGLILHTGSGTLSAIGWRDIAAVCPLGALEAMLAEKTLIP RAILGALAVVAFCLILGRVFCGWICPVPFIKQLFGQEEHACESPSEKKAVNHTALQHRCV IPLRVIKDTSGRTAASPSTTDTAQTKSAESAKTAAVTTNIKSPKGPFMVLAGALASSAAF GFPVFCLICPVGLTFALVIALWRLAEFNELSWSIAIFAGFLFLEVFVLRRWCRSFCPLGA VMTLLSWGNRTFRIRSTPNACLRKTGLPCEVCRSVCPEGLNPTTLETTDLASARCTKCRI CIDACPSQALQQSFFTRSSSVIDTLSNRRPLLRAVREMPTPAPAQQRRQNFNPVDQTFSQ TAAVLQASRCISCGACVEACPQGNSIPSLTAALREERLRNAALLMLRPGAFPEVCGRVCP SMRLCESVCPIPADLGGPVPIAALERFAADYLLDGGWDPWPLASNGKRVAIVGAGPSGLA CADVLARQGVNVTVFERDSEIGGLLTFGIPSFKLEHALISHRRRMLERLGICFRLSTAVG RDISIKNLLQNFDAIFIGIGAEFPVTPNLPGLDGHGVVWARPWLAHVAGAHLAIPGFAPL PDLSTQRVLVLGSGDTAVDCLRTALRLGADAPTAICRRSLDNLRALPEEVAAAQDEGARF MAQVDAVRITHRTNGSIAGLVIRSRVDGIERILPADLLIIACGFRAKPAAWLLECGVTFN MDGQIMIDNHRTANPKIFAGGDAVRGADLAVRAFVDGRDAAEEILRTFTPNTN >gi|319805658|gb|ADMF01000007.1| GENE 4 3109 - 3753 281 214 aa, chain - ## HITS:1 COG:napG KEGG:ns NR:ns ## COG: napG COG1145 # Protein_GI_number: 16130142 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 3 181 6 196 231 82 32.0 7e-16 MTKCQQKTRQSLKDPARRDLIAGAAGAVGLVVFGGFIGHSTVSEASLVRPPGSRPEAEFL ARCIRCDRCRSVCHTNAVGIAHFETGFLAMRTPVMTFHLGHCDFCKKCAEVCPTGAIEDF APETVRIGIAVVTESCIALRTGACTKCYEACPYDAVTLDARRRPIVDSLKCNGCGMCEYI CPSNIFQAYQGKRVRGIIVRPLEAPKVKVLGEVV >gi|319805658|gb|ADMF01000007.1| GENE 5 3777 - 4463 707 228 aa, chain - ## HITS:1 COG:VC1720 KEGG:ns NR:ns ## COG: VC1720 COG3381 # Protein_GI_number: 15641724 # Func_class: R General function prediction only # Function: Uncharacterized component of anaerobic dehydrogenases # Organism: Vibrio cholerae # 1 220 2 220 220 91 31.0 1e-18 MNNLQNILQTRCTFYAFLARIFRTEADQQLLEALNGISFPEKSGDPVLDAGYAALTRWKT APGSDPLTELAVDYARVFLGAGVAGKDAAYPYESVYTSPQGLVMQQAWEDVCRIYHAHGL KKPDHCDVHEDHVALELDFMAKLSSDALNAAEREDDTALLKILAESLSFARGHLLNWLPG FSTDVAKYAETPFYAAAAQIALAFTQLDASMVEELLKELHGTAGEISA >gi|319805658|gb|ADMF01000007.1| GENE 6 4514 - 5344 495 276 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302860807|gb|EFL83884.1| ## NR: gi|302860807|gb|EFL83884.1| hypothetical protein HMPREF0189_00962 [Burkholderiales bacterium 1_1_47] # 1 274 3 272 274 74 28.0 8e-12 MGTGWSLAFFAAAAVLAASLATAALAGELCRLPVRRIAAVSTIAALLLICGEVLALFSLG RPELIFGILANPSTGLFREFAAACAAAAALLGLVWARRRCALRRTCLLFAAAAALLALGA VASVGTVLWMPWRAGWHTATMALPLLGLVCPATALVLRLLSEDGPTSFKGVQHCFIALMP ALGAAIWLGTLAWGPAPIELPTASRLLSGDLALPFWIGFVLLGILIPAAVLVLSSFSPMF RFGNFIGLISAAAAAAAIARTTELLGGASSWRFFLT >gi|319805658|gb|ADMF01000007.1| GENE 7 5362 - 5955 374 197 aa, chain - ## HITS:1 COG:VNG0830G KEGG:ns NR:ns ## COG: VNG0830G COG0437 # Protein_GI_number: 15789981 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Halobacterium sp. NRC-1 # 1 181 1 208 262 160 43.0 2e-39 MTQKTMVIDLDRCIGCFACEVACKQENNVALGVYYNKVLSIGPMGKFPDIKQYFLPSICQ CCKDAPCVKVCPTGATYRTDDGQILVNKEKCIGCKMCMAACPYGARSYNANTNVVEKCTL CQHLQAVGEKPACVKVCCAKARFFGDIDDPESDVSKAIAAAGPENVHSLPDSGNHPTVRY ILHKKTGDWQSNPPKML >gi|319805658|gb|ADMF01000007.1| GENE 8 5971 - 8652 1826 893 aa, chain - ## HITS:1 COG:AF2384 KEGG:ns NR:ns ## COG: AF2384 COG0243 # Protein_GI_number: 11499961 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Archaeoglobus fulgidus # 6 792 2 751 822 222 26.0 2e-57 MELHKISRRSFLEATALSGAAAVFSHPLSGGLVSTASAAEAPIAAAAEEETKIVKTCCRA CIHNCGVLAHVRNGRVVKLEGNPEYPMSKGALCAKALSGVSALYHPNRNKYPLLRVGKRG ENKWRRISWNEAIDIIAKKMETVRHEYGAEAVLVTTGGGGNPAFRGIPRFCNAFGTPNWY EPGCAQCYLPRTLAYDMMYGGPSTSIADESAREIYNPNSAIKTLVLWGTDASYSCTAGGG RALVELRAKGVRTISIDPRFQPDAAKADIWLPIRPGTDVALMLGWARYIIEKDLYDHEFV MKWTNLPYLVNATTKRLVRASDLDSAGDAKTFVVWDAKTNSPKPIKYPWDDALDPVLDGE FEWAGVKYRTGFNALRERCSPWTLEATAKECWLDPKKIEEAILMYADGPAGISLGVATDQ TPNSVQAAMGSVILNALMGNVERPGALMQRNPSSNVVPAGSLATRCSYLLPEGQLTKRLG SNEHKGLLQWDAGQPSAILNAILTGKPYPLKVWLERSGNKFGVNGNASSWVPALEKMDLV VHMYMYPTSFSKFADILLPAREWLETNMLVECMNMVFARQAVAHVWETEDETLFWSKLIK RCAELGNENCKRACDPSFMKDDLAYWDTMEELLDGRLKRIKMTWKDLLAHNPVEYMPYDK WNQYYVYKKIDPKTGLPQGFRTPTKKLELYGDVFIELGRTGKPYALQKLPPVKQDYDPLP YYLEPAESPTGEIAKKYPLVLTSGRIPMYHHGTLRNIPYLREIYPVPETWLNPITAKQYG VQTGDWVWVESLRGRIRGKVRVTEGVGPNIVWMERFWFPETLNTKTGGWQESNVNVLTKN DAPFNDMVGTYTLRGFQVQISKADGAPEGIWQKPQDFKPWMPEPSDTTPNVKF >gi|319805658|gb|ADMF01000007.1| GENE 9 9418 - 9834 575 138 aa, chain + ## HITS:1 COG:RSc0046 KEGG:ns NR:ns ## COG: RSc0046 COG1734 # Protein_GI_number: 17544765 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Ralstonia solanacearum # 2 138 3 139 139 161 69.0 3e-40 MAKKVLTAEEILKMPEDDYMNAQQLEFFRRRLTDLEKELRANADQTTVNLRETTVVPDPA DRATIEEEHALELRTRDRERKLLKKVQAAIKRIDDGDYGYCEETGDPIGVARLMARPTAT LSLEAQQRRELKQKMYGD >gi|319805658|gb|ADMF01000007.1| GENE 10 9916 - 10641 330 241 aa, chain + ## HITS:1 COG:RSc0032 KEGG:ns NR:ns ## COG: RSc0032 COG1011 # Protein_GI_number: 17544751 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Ralstonia solanacearum # 18 207 31 221 287 128 38.0 1e-29 MPFLLSGKQLHGSAGRKVWLLDFDDTLFASSAGLLHEVHLRMNAFMTERMGMSEEEANRL RSHYWQTYGSTFIGLWRRHGVDPKVFLPAVHDFDYAPFVQNAPQLRRLLAKLPGRRVLYS NGPRLYVERLLPALGLRNFFHAIVSSTDMRLFGDWRPKPNVSMLRAVCARLKTRPADAVL VDDSLMNLKAGKAAGLATVWCVGLRRKHAGLLLPAGTPAKLPEVDLVVRNVEDLVRRAHL L >gi|319805658|gb|ADMF01000007.1| GENE 11 10657 - 12465 1139 602 aa, chain + ## HITS:1 COG:VC1994 KEGG:ns NR:ns ## COG: VC1994 COG0616 # Protein_GI_number: 15641996 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Vibrio cholerae # 3 531 11 541 616 281 33.0 2e-75 MTVLKCLWRVLDFCRRLVLNLIFLGVLVAAALIWLFARPNTPAVEPGTLLVLDLDGAVVE SDPLRSISADLKSLMKSRGASTRLIDVTEALRFAGSDERIAGVIIKVDGLTKLGLASART IGSAIEDYKTASGKPVFSWASGYTQAQYAAAAHADVVALHPMGSVMVKGLSGTTLYWGGF LEKLGIGVSVFKAGAFKSAPEAYSLRAPTTDNLIAQEGYLSEAWKVFASDLEDARGLIPG SVDTYLKGLPERLNAGESPAEAAKAAGLITDLMAREAFDETLAKQFGGGNLKNVKTVNFG AYLAETARSRSAAQPGAVAVVLAEGAISSTGATGIDAEELVQRIERAASAPSTKALVLRI SSPGGDALAAEAIREKLAAVRTKGLPVIVSMGNAAASGGYWISLAADRIVADPLTLTGSI GVFSIVPDAAAALEKLELGIGGFRTSDFADFGSPLHKPNAAEAALLRAGVMRTYARFKDL TAQSRKKTPEAVEALAQGRIWMGTQAAQNGLVDKLGDLNDAVKLARQVAGLKTNEPIRIY DVEADAMTSMLSGLMGEAMLKVFVQLPITDFLQLRNIPIRDAEAALLSSGRTLAWSPAGL DL >gi|319805658|gb|ADMF01000007.1| GENE 12 12613 - 13386 464 257 aa, chain - ## HITS:1 COG:aq_1329 KEGG:ns NR:ns ## COG: aq_1329 COG0476 # Protein_GI_number: 15606532 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Aquifex aeolicus # 12 253 10 252 271 197 42.0 2e-50 MNDQERFAALRERLSRQMRIKELGEDGEKRILKTRFLVIGAGGLGSPALLYLASSGASHI TVVDPDEVSENNLSRQILHDGSSIGLNKAQNAAQELLRWNPVLDIRAVPHRMADVEELRS LVREHDIVLDCSDNLATRQLANRACFIEKKPLVFAAAVKLSGQVTVFDFRDPNSPCYRCL FEEDDAANDEKASTLGVFSGLTGTIGLLQATEALKLAAGIGRPLTRRMLFVDLLNMDMHE MRYSRLKGCPCCGGTAC >gi|319805658|gb|ADMF01000007.1| GENE 13 13468 - 15003 1725 511 aa, chain - ## HITS:1 COG:RSc0352 KEGG:ns NR:ns ## COG: RSc0352 COG0793 # Protein_GI_number: 17545071 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Ralstonia solanacearum # 3 495 19 522 549 364 43.0 1e-100 MKLRLLSLFVAGALAGALATTGMQVYADKQAETKLPLMEVRQFTSVFNAVKDYYVDEVSD KELLELAVEGMVSGLDPHSSFLDPEGFEDMSEATHGSFGGLGIEVTKDVSGVRVISPIDD TPAARAGIRAGDIITKLDGEATADLTLEEAVKRMRGEPKTKIRLEIARKGEMKPRSFTIE RATIKTQSVRMKELADGFGYIRISQFQERTAEDLAANINKLEKSGHLKGLILDLRNDPGG LLQAAIGVSAAFLPEKSDVVSIKGRTPQSDYAFKAVEKDYRSGNAAKALAELTPAAKTVP LVVLINSSSASASEIVAGALQDHKRAVLLGDRSFGKGSVQTILPMTFGEKTVGVKLTTAR YYTPSGRSIQARGIEPDFYVDDTPKGNFPTFQVREADLAHHLANQQDAKKSDKDKKAEAE ALPYDDNDEAKTPDWVYLFGDDKDWQLKQAIAHLKGEKVETSRLRGQPISVAKKLRAEDA AKAKAQAEAEAKKAKENTSDNKPTEAQKKSE >gi|319805658|gb|ADMF01000007.1| GENE 14 15073 - 16323 849 416 aa, chain - ## HITS:1 COG:PA5133 KEGG:ns NR:ns ## COG: PA5133 COG4942 # Protein_GI_number: 15600326 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Membrane-bound metallopeptidase # Organism: Pseudomonas aeruginosa # 34 413 19 423 428 167 29.0 4e-41 MSFFRLLSLVLCLALLSVFAPAETSAALKSDATAKQKVQAENRKASVDEKLSELEKKLSA REAENEAAENDLKKADQSISEANRRLRTLKTERSTVEQRLSELRQDGRSVERDLREARSR YEQIMRAQYVHAQRHSWQSLIEGGNPNELARTAAELRYLSLAQQEAAKALTQKQTQIDTV EKETRARRAELSRIAREEEENHAKLLDEKRDRQAAVKKLAREIATQQAAIEKLKKDQTRL ENLVASIDKRLERERAAEEAAARAEEAKRAAAAQKNQKPIAPLPSGSFAQSKGRLIRPVS GRVAAGFGSRRTGSAVWQGILFSAPEGAEVSACAAGRVVFSDWLRGYGNLLIIDHGGTYM SVYANNESVLKNVGDKVTAGETISTVGTSGASDEPGLYFEIRYKGKPINPQPWLAK >gi|319805658|gb|ADMF01000007.1| GENE 15 16455 - 16859 463 134 aa, chain + ## HITS:1 COG:YPO0065 KEGG:ns NR:ns ## COG: YPO0065 COG0607 # Protein_GI_number: 16120416 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Yersinia pestis # 3 132 7 140 144 79 36.0 2e-15 MSQFIVQNALLIIIAVIAAVSLAMPLINTRRFGPMVSSEQAVSLINKQNALVVDVRAQKD FKRVRIANSVNIPANEIQNRLGELSKDRTIIVVDNSGNMSAAASKLLRGVGFTKVYVLDS GLVGWMRDKLPLES >gi|319805658|gb|ADMF01000007.1| GENE 16 16980 - 17522 807 180 aa, chain + ## HITS:1 COG:RSc0356 KEGG:ns NR:ns ## COG: RSc0356 COG1952 # Protein_GI_number: 17545075 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Ralstonia solanacearum # 27 175 17 162 173 129 45.0 3e-30 MAENENVQNPEAQQPQAQPEQDDQPVFQLQRCYLKDASLEMPHAPDILLTPQESAPQVDI QFEVSQRLVQADLYDITVRGTITVKAPEDKVIILAEGRQSGIFSIHGIPAEPLQHVTNVL CPSMVYPYLRANLADLMTRAGVPPVHLPEVNFEVLYQQRLAQAQAEAHAAAEKQGDAAQN >gi|319805658|gb|ADMF01000007.1| GENE 17 17757 - 18419 646 220 aa, chain + ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 2 216 3 212 218 248 62.0 7e-66 MIRILLIDDHTLFRSGVKALLQRQPDFEVVGEASDGLEGVKLVEQVEADVVLLDLDMPSM NGREALEQIRETHPNLAVLMLTVSEDCEALGECLKLGARGYLLKKIDQDFLLRSIRAAYN GDSVISPQMMTKFVNRLSEPPEAARTRQAQGTDPTVLTRRERQTLAWLARGVSNKEIARA LNLAESTVKVHVQSILRKLNLSSRVQAAIYAIEHKIDKEL >gi|319805658|gb|ADMF01000007.1| GENE 18 18494 - 18964 390 156 aa, chain - ## HITS:1 COG:RSc0358 KEGG:ns NR:ns ## COG: RSc0358 COG0219 # Protein_GI_number: 17545077 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Ralstonia solanacearum # 1 155 1 155 156 232 70.0 2e-61 MFNVVLVHPEIPPNTGNVIRLCANTGASLHLIRPLGFSLEDKHMKRAGLDYWEYATLKIH DNWEAFLAAEHPNPERMFAMTTKGSTVFSQLKFIPGDWFIFGAEGSGLPDDIRSAFSAQN RIRLPMRPDNRSLNLSNAVAVTVFEAWRQQNYAGGC >gi|319805658|gb|ADMF01000007.1| GENE 19 19038 - 19838 653 266 aa, chain - ## HITS:1 COG:RSc0374 KEGG:ns NR:ns ## COG: RSc0374 COG0568 # Protein_GI_number: 17545093 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Ralstonia solanacearum # 1 256 45 298 306 276 55.0 2e-74 MLTAEEEKTLALKLRDQNDLEAAQKLVLSHLRLVISIARGFLGYGLPYADLIQEGNIGLM KAIRRYDPDRGARLMTFAVHWIRSEIQEYIIRNWRIVKLATTKNQRKLFFNLRQLKEDSQ AALTNQEAQRIALTLDVKPKEVLDMEERMYGQETSIDGPADSDDDDRFSPSDWLTRTSDQ PEAILEAEDRQHLEGEGLQTALAALDPRSRRVIEARYLTVDADGTAKPVTLQALAHELGV SAERVRQIEKLAIKKMGEKLAGQDPF >gi|319805658|gb|ADMF01000007.1| GENE 20 20276 - 21184 839 302 aa, chain - ## HITS:1 COG:STM3569 KEGG:ns NR:ns ## COG: STM3569 COG2177 # Protein_GI_number: 16766855 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Salmonella typhimurium LT2 # 12 296 56 346 351 84 25.0 3e-16 MSFFTGFITSRRWAFEEMFRGLKRNAGANAFAVLLSALALTIPLWIALVFYGLSEPLRSL PTSVELTVFTKEGADAVKVANAVRAAPLVTSAQVIGKDEALKALNAQLGLPSQTAGGNPL PDIIVAVLDDRASADEIAAAAKRISALPGVDFAPYEASWHEKLRAVTQASWVGLACLGTV VALLVILVLESAVRMTTASARDEMCTLYLIGAAPGFAARPYAWRGMVLMGTAAAAALGLS AAGIKLLQPYLDRAAALYGGSVTLTLPTLELCLGFVAAAAVLGGLTSSLAALRAWRTIAK AQ >gi|319805658|gb|ADMF01000007.1| GENE 21 21181 - 21876 274 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 23 221 19 218 223 110 30 4e-23 MAPAVPQPLLELHSTSVIIDGSVVVDRVSLTVGRGEFVLLRGPTGSGKSTVLKLLAGLVR PTSGEVIVAGDRVDHFNEMERRWLRRSMGLMMQDGRLLDDRTVHENVMLPALAAEESYAE ARRRGFLALEKCGLAEHADAFPARLSAGQRQLALLARAVVNRPVVILADEPVAHLDDVNG EALLALLATFARAGVTVVCASHKALTVPRAQLREIILSTPGSMAVDTEIRA >gi|319805658|gb|ADMF01000007.1| GENE 22 21889 - 23358 1206 489 aa, chain - ## HITS:1 COG:NMB1467 KEGG:ns NR:ns ## COG: NMB1467 COG0248 # Protein_GI_number: 15677321 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Neisseria meningitidis MC58 # 2 487 8 500 502 329 37.0 7e-90 MLLGAVDLGSNSFRVEIGRLEGDSIHTQNYLKETVRLAGGFDDKGALTPEIQARALAALA RFNERLAGLPSTQVRAVGTQAMRVATNAADFLKKAEETLGYRIDILSGHEEARLVFKGCA HTLPLSDKRRLVVDIGGASTEIIIGKGLEAQRYESFRMGCVNTSIRFFREGKITQKSLDR AITACAAELEESITTFGRGTYDECYGSAGTFGAVSDICHALGWNTDGEVTPEHLERLRKM LLDMRDVKDVNFPGLKEDRREVIAGGLAVLSAVYRVLGIREMRPAQGALRMGLLYDLLGR VSNRDTRDAAIEGLMTATRIDREQAERVANITLAFYRELCPDASPELLRYLRWAALVHEC GMSISSSRYHRHGEYIIKNADMPGFSRREQDMMAAIVLSQRGNLKKLEGAFSSGLISRAA ALAIRLAVIFCHARKDVELPIMTIHRSNEQLVVRLAEVWLNAHPLTDYLLKEESDCWDRV GRSVKIEKF >gi|319805658|gb|ADMF01000007.1| GENE 23 23409 - 24341 680 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 12 304 21 319 336 266 45 3e-70 MALGSSEGWFSRLKNGLSRTRVNIVGLFSGGVVDEDFLEELEFALISADVGVETTTHILE RLRSDIKLQGLKTQEEVKLALRDELVTILKPAEGVLNVDQAKPCVIMMCGVNGAGKTTSI GKLAKRFADNGKSVLLAAGDTFRAAAREQLAVWGERNRVEVIAQTGGDPAAVVFDAVNAG RARSMDVVIADTAGRLPTQTNLMEELSRIRRAQEKALEGAPHEVILVVDGTNGQNALAQV AAFDTYAHLTGLIVTKLDGTAKGGVLAAITAARGERRLPIYYIGVGEKLEDLQPFSAEEF ANALVGLDAK >gi|319805658|gb|ADMF01000007.1| GENE 24 24347 - 25093 409 248 aa, chain + ## HITS:1 COG:XF0979 KEGG:ns NR:ns ## COG: XF0979 COG0742 # Protein_GI_number: 15837581 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Xylella fastidiosa 9a5c # 27 199 6 171 200 121 44.0 1e-27 MKMLKSPRNARKDAVSASLTTSRGEREGAVRIVGGRWRRTPLAVVDRNGLRPTPERVRET VFDWLGHLLGSFSGKSALDLFAGSGALGFEALSRGMKAADFVERDSRQAALLKHAAAKLS EKEANGTQIRVHQGDAFQFLEGAASYYDVIFIDPPYALNLQDEAIVEAAKCLGPNGILYV ERSGVLTSPEVLDQQKLVRLRSMSAGQVTCELLGFAAGSLAALAKVKKPLRGKAAKIAAK QAQKAAQG >gi|319805658|gb|ADMF01000007.1| GENE 25 25171 - 25662 282 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 5 136 7 138 164 113 44 5e-24 MLNAVYPGTFDPLTNGHLDLIARASRIFPKVYVGVATSAGKHPLLSLEERLYCARLVCAD FANVEPLPVTGLLKDFVMSHDVGVIVRGARAVSDFEYEFQMAGMNRQLMPEVETVFMTPS LQNQFVSGTFVREIARLGGDEAAAFVDPRIWPTLQSAARRNPM >gi|319805658|gb|ADMF01000007.1| GENE 26 25718 - 27904 1585 728 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRTLRTTIVILLFLSLLALSLVGALTLYATPERVTARAAAMLESHLGLRAELSGDVELKR LPKLILRIPAGELIHTKDSTHAGRFASAEIELAPWSLFAQSPRVDRVAVDRLELNDISYA KLLENTTSSAEHAVWNIDQLELTQASIRFDALPHVGAGMLSALDAEFSNLSETGGTVRLA GTLTLPQAPSISAALVSEGSAQTLNGLTGTLTFTGVFTFDAQKGLVLQMPAATFDGISGS MNFKASASASRLTSAPMGQPWIAEKPALGGSLRESTTFSIQAPTASITSDGVFAEYASAR GQLSAAKRNWSLAGTAGVDLSWANGSLKLSALDLSSSTDSTTVNRLTGTLNLSADTLQTD LEGTFFGTTVSLHLAQLSGNAVSGNIALGAASAATLESLSPLWGHFVAADGRDFKIAFTI GTLKLSETGKLTALNDVSADLTRSAGIVNLTRGQAAFLNGAVQLAGILTPDGIWRINSTL KGADAQNAFAVPAPIAGRMDGTFDLEGTFYPLEGTITVAEAKGKVRLTEGTLLGIDLEKA RQILINEAPETLPPELVAKTARTRLSELTADIALTKTSESEHFIKISGKALAPRVGSAEL PWIAEFAGEASHSQTTIDIKATLAAEGKTPELMLPVQVIFKTGSAPQWIINWFAAAQPAA AAHADEPFTLKKLGQKFERAMKDFWNGIEFPEIDMPKLPSLPKMPWDSDESAAPRQPTDA DRSSKQSI >gi|319805658|gb|ADMF01000007.1| GENE 27 28035 - 29591 449 518 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 214 513 2 303 306 177 34 2e-43 MLDASALQQVKSYLDRLVNPITLTFAGDASEASEQIRSLLSDLASVSKLITVADAPADLQ VRRPSFTISRTGENMGIRFAALPMGHEFSSLILALLQASGYPSKSAPDLLNRVRGLQGDY DFVVYMSLSCHNCPDVVQALNLMAVLNPNVRVTTVDGALFQDEVKERRIMAVPTVFLNGK EFMAGRHELGEIVAKLDEGFVKEQAAKLSAKAPFDVLVVGAGPAGATAAIYAARKGLRTG LLCERPGGQVNETSSIENFTSILSTDGVALGGRFMEHVNHYGVDVMALERAVKVERQDGF WQIELASGGHLQTKAMIAATGARWRQLGVPGEKEYQGKGVAYCPHCDGPLFKGKDVVVVG GGNSGVEAAIDLAAICRTVTLLQRGGQLTADEVLVKKLLATTNAKVIYNMTVESLEGNGQ LLTGVRYKDKATGEFKILPASGCFIQIGLVPNTDWLKGTVALNDWNEIIINDHGATSAEG IFAGGDCTTSPYKQVVIALGGGATAALGAFDWLIRQQG >gi|319805658|gb|ADMF01000007.1| GENE 28 29780 - 30343 701 187 aa, chain - ## HITS:1 COG:CC2918 KEGG:ns NR:ns ## COG: CC2918 COG0450 # Protein_GI_number: 16127148 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Caulobacter vibrioides # 1 187 1 187 187 258 64.0 5e-69 MSLLTTEILPFETGAYHEGAFKKVTDADLKGHWSVVFFYPADFTFVCPTELEDLADHYAE FKKLGVEIYAVSTDTHFTHKAWHESSAAVGKVQFPMLGDKTGQISRNFDVLIEEEGLAER GTFVINPAGKIVVMEHHDSGIGRDASELLRKVEAAQYVDAHPDQVCPAKWRPGKETLVPS FDLVGKI >gi|319805658|gb|ADMF01000007.1| GENE 29 30495 - 30863 390 122 aa, chain - ## HITS:1 COG:RSc1907 KEGG:ns NR:ns ## COG: RSc1907 COG1396 # Protein_GI_number: 17546626 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 6 107 19 122 173 63 36.0 9e-11 MATTSTKRRKDAGERLKGERERLGYAPRQIAQLLGVPLEAYDAFESGTADPGIWRMPRLA ACGFDVLFIITGERHLVIEEENELLTRFRELSQRGRASVFTTLDALERLAPNIRKQFDRF KN >gi|319805658|gb|ADMF01000007.1| GENE 30 30990 - 32084 1207 364 aa, chain - ## HITS:1 COG:RSc2898 KEGG:ns NR:ns ## COG: RSc2898 COG0012 # Protein_GI_number: 17547617 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Ralstonia solanacearum # 1 364 1 364 364 555 76.0 1e-158 MGLKCGIVGLPNVGKSTIFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLQKLSEIVKP ERIVPAAVEFVDIAGLVAGASKGEGLGNQFLANIRECDAIAHIVRCFNDDNVVHVAGEVN PLNDIAVINTELALADLATVEKALNRYAKQARSGGDKEAMKLVLVLEKLLPVLNEGMPAR SVKLNEDEQKVIRQLFLLTMKPTMYVANVEDHGFTNNPLLDAVREFAAKEHAPVVAVCAK TEADIADLDDADKEMFLEDMGMSEPGLNRVIRAAYDLLGLQTYFTAGVKEVRAWTIHKGD TAPQAAGVIHTDFERGFIRAQTIAYDDFIAHRGEKGAQEAGKMRAEGKDYIVQDGDVMNF LFNV >gi|319805658|gb|ADMF01000007.1| GENE 31 32258 - 32779 264 173 aa, chain - ## HITS:1 COG:SMc00850 KEGG:ns NR:ns ## COG: SMc00850 COG1683 # Protein_GI_number: 15964609 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 6 164 5 160 172 120 41.0 2e-27 MVAPVVLISRCLLGERCRYDGRLKPSILEHLAQYQVTAQHVRWVPICPEVDGGLPVPRQP CEICPGSTASDVLSGRSKICSCHGDDASDPYVRGAKLAVIAAQTLGAQFALLKARSPSCS PDCIYDGTFSGRLVPGRGIAAQALADVGIELFSEETVEVLIDRIRSINAAVSV >gi|319805658|gb|ADMF01000007.1| GENE 32 32784 - 33437 554 217 aa, chain - ## HITS:1 COG:NMA1004 KEGG:ns NR:ns ## COG: NMA1004 COG0193 # Protein_GI_number: 15793960 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Neisseria meningitidis Z2491 # 8 193 5 187 192 172 52.0 4e-43 MAQQNLPIRLIVGLGNPGPDYVRTRHNAGFRFVDMLAGKLGAHFHEERKFQGETARCRIA GHEVWLLKPLTFMNASGEAVSVMANYFKITPAEVLVAHDEMDLLPGCMRIKKGGGNAGHN GLKSITQQLGTPDFWRLRLGIGHPRTLGLAQQVFDFVLSAPSSEHEEAIRTCALAALETA PLWAEGEMEKAHRAIAAFGTPKKPAPPQKPGRQTIEA >gi|319805658|gb|ADMF01000007.1| GENE 33 33457 - 35262 1870 601 aa, chain - ## HITS:1 COG:XF0252 KEGG:ns NR:ns ## COG: XF0252 COG0513 # Protein_GI_number: 15836857 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Xylella fastidiosa 9a5c # 4 542 17 572 614 405 43.0 1e-112 MADFAELGLSPQLVSSLTALGFEEPTPIQEAAIPAILAGSDVLGQAATGTGKTAAFALPL IERWALGKEPSDPVILVLTPTRELCLQVSESFHSYGRDAGIIVTPIYGGQEYGRQIRSLK RGTHVVVATPGRALDHINRGTLKLDAVKAVVLDEADEMLDLGFADELDAIFEALPEGVQT ALFSATLPPRIAKIADEHLKNPVRIAIAKEETPEGEAPRVPQIAYIVGRNYRTAALGRIL DLEDPELAIIFARTRNEVDELTEALRVRGYSVEALHGGLDQPTRDRVMRNARSGKIDAIV ATDVAARGIDLENLTHVINFGIPASYETYVHRIGRTGRAGRTGTAITILEPREHRHIRAL ERATRSKIEIRTVPSATDVQAKRLEVTRGAIAEILAQGGLERYNVIVEALCEEHDPIEVA AAAVRLALESEGTNDDDMEIPAFGDRRDRRERSERPERPRRERGEPEEGMTRLFIGAGRM SGVRPGDIVGAIANEANVSSRQIGAIDISDRFTLAEVDSAVAQQVIDALQGVRFKGRPIT VKLDQGAPREERSDRGRSDRFEREGRNDRYDRPERKRFDRDDRSERYSRFDDDNRRRGPR R >gi|319805658|gb|ADMF01000007.1| GENE 34 35588 - 36232 556 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|91787188|ref|YP_548140.1| 50S ribosomal protein L25P [Polaromonas sp. JS666] # 1 211 1 213 227 218 51 8e-56 MKVIATTRTTQGTGASRRLRRADKLPGIIYGGKNPATPIELEHNPIFFALRKEKFHASIL TMELDGKEELVVLRDFQMHPYKQQVMHIDFQRIAPDEVVTMRVPLHFSGEELSPAVKIDK CIISRATAYVEVACLPRDLPEFIAVDLSKMETGTTLHATDLVVPEGVKMVTDSVIASVIQ PVEEEIIAPAAAEGDAAAAAPAEGAAAPAAAPAK >gi|319805658|gb|ADMF01000007.1| GENE 35 36315 - 37277 1020 320 aa, chain - ## HITS:1 COG:RSc0395 KEGG:ns NR:ns ## COG: RSc0395 COG0462 # Protein_GI_number: 17545114 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Ralstonia solanacearum # 4 319 1 316 316 442 71.0 1e-124 MVPMVPESMMVFAGNANPKLAQAVTEYLHIPLGRAAVSRFSDGEVSVQLLDTVRGKDVFV LQSTCAPTNDNLMELLIMVDALKRASARRITAAIPYYGYARQDRRPRSARVAISAKLVAN MLQSAGVDHVLTMDLHADQIQGFFDIPVDNIYATPVLLSDLASRHFENPIVVSPDVGGVV RARAMAKAIESDLAIIDKRRPRANVAEIMNIIGDVAGRTCIITDDIVDTAGTLCNAAGAL KERGALAVVAYITHPVLSGAAIERISNSALDELVVTDTIPLSPAAQACSKIRQVSCAAII GETLSRIAREASVSSLFSEC >gi|319805658|gb|ADMF01000007.1| GENE 36 37455 - 38399 321 314 aa, chain - ## HITS:1 COG:RSc0396 KEGG:ns NR:ns ## COG: RSc0396 COG1947 # Protein_GI_number: 17545115 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Ralstonia solanacearum # 4 300 6 284 289 207 45.0 3e-53 MTTTAARSCLNLPAPAKLNLFLHVIGQRSDGKHLLESIFILINLFDTIDLIERFDGQLER TGDIIGAPEKDLCIRAAKALLTAAVDHGKRCCGQLPGATIHVQKRIPAGAGMGGGSSDAA TTLIGLNRLWKLGFDRNELAAIGEQLGADIPFFIKGANAFVEGIGERITPIEVPPGRYMV IWPGRSVSTADIFNAPALTRDSESQTIHVFSDLLRNHWPALPGRNDLQTTAAQFEPAVLE ALDKLAALGPEFGEPRMTGSGSAVFAPILNGDADASAPELSRLPSGWRGFCVSSLPEHPL KPWSEDAEEENLGV >gi|319805658|gb|ADMF01000007.1| GENE 37 38396 - 38938 462 180 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSTSRRTFCLQSLAAGLSAVTLLSGCAVTPQNARVWRGRFSLRITAADGRLENQTGRFE LTKTPQFLRLDLLTPLSGILARIEETSRGASFTRSLSEPAVTRSDINALLTELLGFTLPV VPLANLLEQTAAAEMSVYGPWRAQILSRFTDGSPQRLRIDGRAGQTSAAPLVQLTIFVEA >gi|319805658|gb|ADMF01000007.1| GENE 38 38935 - 40701 1689 588 aa, chain - ## HITS:1 COG:PA4667 KEGG:ns NR:ns ## COG: PA4667 COG0457 # Protein_GI_number: 15599862 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Pseudomonas aeruginosa # 39 551 67 560 590 127 25.0 6e-29 MPSGLFKFAVSTVFAVAASAFAHPGMPAGHPEVAHPNRTLFELITADIAVHRGDTGFAYE AWMDAAKNEKSADLAKLAWEAAVATRNPEKAIAAAKVWLDSDPAAFEARLTLLADAVERG DDAAVRAQIDELSRRSSETEKTPAEKGSWLVRLYPGLAAVKPGSGLKTAVQTLEPIVAQY PKRADVQIGFAQLLARTGQGDLACRRAAAASASVPNDHERLGEAADVCWQAGNMGEARSM LEKYLKKHPNDSYVLLIFGRVEERLGRRASALDALVRAMKQPASDERIAFNAGELAADLG DAPKTEAYFKRYVEMLRAQSEDIDLTRLEVWLRLGNAALMQKSPERAAEYYAELRGGPFA VDARIREALALTDAGRPEDALKALREGREELKLDAPALMSAESKLLLELNRKQEAVALMQ QAAQTYPTEPEVLYDAAMVEMDSGLRTEAEKHLRALMTVNPQHVQGANALGYLLTEDNRD LKFARELLERAYRAEPLNPYILDSMGWLNFREGRYRAAAEFTTASLKRLWDIEVAGHLVE IYAAQGKKTEALRTLHELARQGGDDAKALVDQLAARWKLSELPIKTAQ >gi|319805658|gb|ADMF01000007.1| GENE 39 40819 - 42234 938 471 aa, chain - ## HITS:1 COG:YPO2997 KEGG:ns NR:ns ## COG: YPO2997 COG0642 # Protein_GI_number: 16123178 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Yersinia pestis # 19 469 5 449 449 201 32.0 2e-51 MIISSAFGWFAGIRGINSFFWRLFAGLLAVIVLSSFLGFGVHTYLNRDEARYGKVDVFVG GRKAVQAALIIYQLKGQDALVEWLKSPGNVLPTVYIVDDHGSEISGRTAPELALRSIEEN SIPEVEDHVLKNYPLNAVEDIEINGRPYTAFAVFEHSNHDLPFFNPFGTGIPIYVLFLVA LILTAFVSAILAYYYTRPLRKLDGAMRAFAEGKLDTRVENSIGRADAEVAALAGIFDKMA GQISRLINRQRRLFHDVSHELRSPLARIDVALDIARRDADRVGPSLDRIEREVDELDRLV GSLLAYARYEQGAGMPLTPGSISAVTAEVVENTAFEAQKKNVSVVLEDELPSKFVLPINA DALRSAMENILRNGLRQTPAGSRLSVTLTATSRFVRISLCDQGPGMPPEEIEHAFDPFVR GSHEQTGTGFGLGLAIAQRAVQAHFGRIEARNLPTGGFEVRIDLPRTEAVR >gi|319805658|gb|ADMF01000007.1| GENE 40 42341 - 43444 324 367 aa, chain + ## HITS:1 COG:VC0452 KEGG:ns NR:ns ## COG: VC0452 COG1194 # Protein_GI_number: 15640479 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Vibrio cholerae # 6 260 4 257 353 236 47.0 5e-62 MTAFTFAETLACWQRRAGRSDLPWQQYHTPYERWLSEVMLQQTQVETVIPYFERFLAAFP SVEALAAASEAQVMKLWAGLGYYSRGRNLHRAAQMVVKEMQGRFPTTADELIKLPGIGPS TAAAVAAFTSGEAKEPMIDGNVKRVLARIDGIPGRVGEKAFETALAAAARRKLPGSECIA AYTQGLMDLGSLVCRRKSPNCAACPVRNFCKAFALGCPEDYPRPKTTAAKKERWLVLVFV ATSAGFWFAPVRGRIWKGLYAPVVAECSEKAWNTSVIAEVPEHLRFLFQTAQPCGRPRVH ELTHQRLHLRAVLSRCEARIADGEALHTEGFTPFGEKPDAWPGLPTPVLEYAKIALREWR DADAYSV >gi|319805658|gb|ADMF01000007.1| GENE 41 43432 - 44322 652 296 aa, chain - ## HITS:1 COG:RSc0403 KEGG:ns NR:ns ## COG: RSc0403 COG1660 # Protein_GI_number: 17545122 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Ralstonia solanacearum # 1 286 1 295 296 276 46.0 4e-74 MQLIIVTGLSGGGKSIAIRQLEDSGFYCIDNLPAEFLLPIAENLEKNGTRAAAVAIDARS HATFENAFTALEALSQRGIDVRILFLTASNEELLRRFSETRRRHPLSTLAEHQGRELTLN EAIAREREIMAPVTETAHVLDTTRLLPSQLRRWVQQFVKQPAAKLTLTFESFGYKRGLPY ASDLVFDVRCLPNPYYSPELRPLTGLDAPVASYLAQEPLVSEMIDDIAAFIAKWLPHYRG QNRHYLTICIGCTGGQHRSVYVAEMLGRRFADQAGTIVRHRALSANLLPENKLQTL >gi|319805658|gb|ADMF01000007.1| GENE 42 44350 - 44823 271 157 aa, chain - ## HITS:1 COG:RSc0406 KEGG:ns NR:ns ## COG: RSc0406 COG1762 # Protein_GI_number: 17545125 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Ralstonia solanacearum # 1 149 1 149 151 111 39.0 4e-25 MNKLSTYITLEAVRLDLNLSSLKRLFEEAGLALESAYGIPHDEAFTALNERERLGSTALG FGCAVPHARLTGLEEPAVVLLRTLEPLKVPSPDKTGAQLFIVILAPEDGADDHLELLRET AELFSDAEARETLLKASTPVEVCEFLTHWETAQTAAH >gi|319805658|gb|ADMF01000007.1| GENE 43 44858 - 46303 720 481 aa, chain - ## HITS:1 COG:RSc0408 KEGG:ns NR:ns ## COG: RSc0408 COG1508 # Protein_GI_number: 17545127 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Ralstonia solanacearum # 14 479 11 496 499 221 34.0 4e-57 MSFVSASLTTAPLQQQTLTPQQQYALKLLHMNASELLAEAERAAEENPLIECEELERSSA DTQPTAGALHEETEAVRHEGESIAPEDHGPLENTYTSWTGSGAGDPDETPVIERVAAQRT LREDLLEELGSLPDDPKIHPLVGCLIEELDDSGFLTTPLAEVAKSYMSIAAAPAADWQKA LALLQTFDPPGVGASSPTEALILQVERRITEGTVKTAVGELLVVLLKNHLRQIAGNDRRA LLTAAKGDETLLQDALALLQTLDPHPASEYAPEAVQYVIADIQVRHRGNRWEAMLNPQAQ PAIRLSSMAQGLSVNESSPFGHYLAEARRLISGIEARQSTLLRTAQFAVDRQQAFFSEGR SALVPLAISEAAGALGVADSTVSRAVSGKFFQCPLGVFELRSLFMPPSVRAVDALGISQA VSPAKIRARICTLIAGESPQKRLSDQALTELLNAEGFDITRRTVAKYRDLEGIPTARLRG R >gi|319805658|gb|ADMF01000007.1| GENE 44 46330 - 47106 302 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 13 252 2 234 305 120 34 2e-26 MANELDDRAHKHTHTLAARGLKKNYGSRQVVKGVDLSVKSGEVVGLLGPNGAGKTTTFYM VVGLVVADGGDIELDGRSIARLPIYKRARLGVSYLPQEASVFRKLSVEDNIRAILEMQVD ENGRALDTSEIEHRLEMLLDELQIKHLRTNAALSLSGGERRRTEIARALAANPRFILLDE PFAGVDPIAVIEIQRIVRFLRDRNIGVLITDHNVRETLAICDHAYIINEGRVLASGDPQD IINNPDVRAFYLGDNFSM >gi|319805658|gb|ADMF01000007.1| GENE 45 47142 - 47738 427 198 aa, chain - ## HITS:1 COG:NMA2132 KEGG:ns NR:ns ## COG: NMA2132 COG1934 # Protein_GI_number: 15795003 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 16 175 17 171 176 73 30.0 3e-13 MNIQKFFLAALTAALAAPVLALSTDRDQAIEVHADRFDGDEVKQTAVYTGNVIVDQGSMQ ITGARLEVRITPKGYRQATVTGEPSRFRQQRDPDPKNPINEWMHARASKIVYDEETDTVT LIGAAYLSRTENGKERDMTEGERIVYDMRNARSKVEGSTVKGEKQRVTTIIAPRSNTAPA PRTGTQLAPAEQLSTPRN >gi|319805658|gb|ADMF01000007.1| GENE 46 47746 - 48438 614 230 aa, chain - ## HITS:1 COG:no KEGG:bglu_1g31180 NR:ns ## KEGG: bglu_1g31180 # Name: not_defined # Def: hypothetical protein # Organism: B.glumae # Pathway: not_defined # 6 188 1 186 204 76 27.0 6e-13 MAHRRMIIRERLTAIIGSAILFALVATSYWYSIQTQVAGLKYVPSEMSPDFLARNVSLTD FTPEGTPKLLAYADDVQHFSDERMRAERIQVISLDPNSAPAFAQADEGWSNDGLETIDLT GHVLVHRRQYQDQPPMTFTTEHLTGWLDTQRFKTDSPVKITRGADETSSQNGLLYDNVTR VLELYGGVESVFHPQSFRKADSAAPAEAVQTVQTTATAESETSAETARRE >gi|319805658|gb|ADMF01000007.1| GENE 47 48441 - 48974 467 177 aa, chain - ## HITS:1 COG:RSc0412 KEGG:ns NR:ns ## COG: RSc0412 COG1778 # Protein_GI_number: 17545131 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Ralstonia solanacearum # 7 174 22 189 195 139 46.0 4e-33 MTKTFDQRAQTIRLLVLDVDGVLTDGSLTFTGEGELSKTFNVRDGLGIKLLQAAGIEVAI LTGRTSSIVAHRADELGMTRVEQGKLRKLPTLKKMLTEAKLQPENIAYMGDDLPDIPCLK LAGLAATPADGSPELDAVVDWRAPVPGGRGAVRAFAERILRAQGKWEPIIAAALAEE >gi|319805658|gb|ADMF01000007.1| GENE 48 48974 - 49966 727 330 aa, chain - ## HITS:1 COG:RSc0413_1 KEGG:ns NR:ns ## COG: RSc0413_1 COG0794 # Protein_GI_number: 17545132 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Ralstonia solanacearum # 5 212 10 215 216 249 62.0 6e-66 MTETHFDANAALKLGQDVLSHEADAILAASRRIGETPDFAQAVKAILGCRGRLVVSGVGK SGHIGRKLAATFASTGTPAFFVHAGEAAHGDLGMITSEDIVLGISYSGETQELLMIVPIL KREGAILIAMTGNPESTLAQHADLHINCHVDREACPLNLAPTSSTTTTLALGDALAVACL SAKGFSQEDFARSHPGGALGRRLLLHVRDIMRTGDELPRVTADVRVLDAVREITKKHIGM TAVVDSDNRVIGIFTEGDLRRLIERMGDVRDVIMRDVMTPSPHTISPDELAAAAVKALEA FQCNQLLVVDADNHLVGALHMHDLMNARVL >gi|319805658|gb|ADMF01000007.1| GENE 49 50163 - 50897 577 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 241 1 242 245 226 47 3e-58 MAMIEIKNLNKWYGNFQVLKNCNVTVEKGEVVVVCGPSGSGKSTLIKTVNALEPFQEGEI IVDGVSVGDPKTDLPKLRSRVGMVFQHFELFPHLSIKENLILAQMKVLGRSREESLTRGL KLLDRVGLLKHAEKYPGQLSGGQQQRVAIARALAMDPICMLFDEPTSALDPEMINEVLDV MVSLAKEGMTMMVVTHEMGFAKKVADHVIFMDAGEIIENLPAEQFFNQPHTERAQKFLSK ILNH >gi|319805658|gb|ADMF01000007.1| GENE 50 50950 - 51633 827 227 aa, chain - ## HITS:1 COG:RSc0483 KEGG:ns NR:ns ## COG: RSc0483 COG0765 # Protein_GI_number: 17545202 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Ralstonia solanacearum # 3 224 5 226 227 187 49.0 2e-47 MSLDFSSITGSVNFLLAGAAYTFELTAITAVLGLALGTLLALARLSTVKWLSYIAKLYID LMRAVPLVLVLFWFFLLMPEVLKIAFGLDHPVMIGANLTAIITFVLFEAAYFAEIMRAGI QSIGRGQFFAATGLGLTYGQTMRYVILPQAIRNMLPVLLTQTIILFQDTSLVYVISGSDF MGAVAKIAQRDGQLVLMYSFAALCYLSVSLSLSMLIRRLQTKMSAAR >gi|319805658|gb|ADMF01000007.1| GENE 51 51644 - 52378 779 244 aa, chain - ## HITS:1 COG:RSc0482 KEGG:ns NR:ns ## COG: RSc0482 COG0765 # Protein_GI_number: 17545201 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Ralstonia solanacearum # 24 244 23 242 242 209 48.0 6e-54 MALNFSLDSLMEQSLLSDDPWWRYILDGAGWTVGLAVSAFLLALVLGIIVGTLRTSPIKI VRGACEAWIELFRNIPLIVQIFIWYFVVPEIIPWYKDWMIEADPAIAQFMTAFICMGFFT SSRIAEQVRAGIASIPRGLPNAAKALGFTTVETYVYVILPMAMRLIVPPLTSEAMNLVKN TAVAMTIGLPELTMRANEMGENTFQFFAAYLWATILYIVIALVVNRVMTLIESRCVIPGF IAAK >gi|319805658|gb|ADMF01000007.1| GENE 52 52549 - 53451 1155 300 aa, chain - ## HITS:1 COG:PA1342 KEGG:ns NR:ns ## COG: PA1342 COG0834 # Protein_GI_number: 15596539 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Pseudomonas aeruginosa # 8 299 10 298 302 256 47.0 3e-68 MFKLSRRTAVAAATCLFALSGVVSAAELTGTLKKVQETGSITLGYRESSVPFSYLNADGK PVGYAFTVCQRVADAVKSELGLKTLDVKYQAVTSANRIPLIQNGTVDIECGSTTNSLKRQ REAAFSVSYFGIQVSAAVWKSSGIKSLEDLNGKTVTVTSGTTSVALIKEFEKAHNLKIRY LMTKDFAESMQLVANKRADAFILDDVLLAGQISNLPNASEFTILDASLGVEPYGAMFRKD DAPFKAVVDKTVKGMIASGELAKLYSTWFESPIPPKNINLNFKMNSYTKELFANPSDKGI >gi|319805658|gb|ADMF01000007.1| GENE 53 53676 - 54452 663 258 aa, chain - ## HITS:1 COG:RSc0476 KEGG:ns NR:ns ## COG: RSc0476 COG1024 # Protein_GI_number: 17545195 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Ralstonia solanacearum # 1 249 1 250 254 150 39.0 3e-36 MSITHSLQYGILHLTIDRVERRNALTAEMFADLADELDQAIMQTAVRVVLLKSSGNVFSA GADLEEMFSAPEDLERETRRFFDSIAKFPKPIIAQVSGPCVGEAFAALLYCDLVYVSPQA LFSLPAVALARTPRYGAAQIMAAAAGYPAAAEKLLLSEPISADEAQAMRLITRVIDDEHL DQVVAAKTARLAVLPPGAVAGTKALLTAARRKALADLTDYEENLYARQARSPEAAEALKA FLEGRKPIFKTEDDPAEA >gi|319805658|gb|ADMF01000007.1| GENE 54 54478 - 57207 1212 909 aa, chain - ## HITS:1 COG:all0769_1 KEGG:ns NR:ns ## COG: all0769_1 COG1042 # Protein_GI_number: 17228264 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Nostoc sp. PCC 7120 # 12 732 24 743 743 252 27.0 2e-66 MLQTAHSSHAALDALLRPRSIVVIGASSMPASRGYHVWRSVALSTGLNALWPVNPKYRFV GEHRCYPNAYAIPDSEIDLAILCVKSKHLPNALKSLEKNPPKAVLFAPQQEGPLIELSTV EQLYESVKRMGSRLLGPNSIGTMAPVQGINASFWPRTPRPGGVALIAQSAMIATGFIERA AASGLGFSGVVSTGLEIDVGLAELIDWFAQDRSTRVIAVEVEALRCPRAFHAALRRATDL KPVVVLRAGPGSGYAAYRLAANRFGTDAGADDAFDALLKNAGAQRVRTFKHFFAATAAFA SGTLPAGRRIAVIANGSGFAGLAADAAEAAGIHLEGLANRTIQSLAKIHPEERLPVNPVV VGAGASGGRLAETLSIVLEDAGIDGAAVVVGPSPMSQLDPTLSELARAAVKTYKPVFISW ITSTADAAVRRQLDQLPNSRLIAVRSPDEAMFAFGCLASRSASLNARRSPPKPRKNKLSA EALACIRLIFHRVREGGRHTLLPRELHELMRHLGLRPVDGRITHSLEEAQQAARELGWPV AIKASSTALGSRSASGLVFLNLDSAEALADAWKELTTNWAENSPWSQPDGVLVESMSQHA FERELRLGIRLDPVLGPVVEFGGAGLASTLYNDLSVALAPLSQDEAESLAHAPRYAQTLD AYRGLPPINWDELTDALGRLGDLAAALPALRSLRLEPVVPTDNGLLVIDASVALYDAPLI PRRDYPHLVLRPAPIEDQTEARARSGEPLILRALTENDFDAFRTFVMTLSDKSYFYRFHT ATRPSTARLAALCRPSWIESGVWGLFAETGALVASGRWSAAQNGGNTDKEAEFGIAVLDS WQRQGLARILMNKLETEAFAEGFHTMVGLVLPGNEAMEHAMTALGYMLDNASAGDSREAR RWIRRLQPS >gi|319805658|gb|ADMF01000007.1| GENE 55 57347 - 57487 60 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHLPAALAIVLWKKVGQDVVGTLAKMNIKDSQDESKRHSHPHYSRT >gi|319805658|gb|ADMF01000007.1| GENE 56 57444 - 58538 920 364 aa, chain + ## HITS:1 COG:SMb20624 KEGG:ns NR:ns ## COG: SMb20624 COG0182 # Protein_GI_number: 16265284 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Sinorhizobium meliloti # 1 349 1 352 364 340 53.0 2e-93 MKVNGIPTRTIRALDNGSAIEIIDQTLLPYRFEKRILSDWRDGVEAIETMRVRGAPLIGI AGAWSVVLAVKENPENGPLLAAAERIQCARPTAVNLVWAVQKMLTALLPREPSQRFDTAV KLAAQLTQEDVDTCRAIGDMGCSLIAERYQALRRPVNILTHCNAGWLATVDYGTALAPIY AAFERGTPLHVWVDETRPRNQGLLTAWELRQQGVPHTIIADNAGGQLMQKGDVDLVIVGA DRITRRGDVANKIGTYLKALAAFDNDIPFFVAAPSSTIDWKLNDGKREIPIENRSAAEVL TVRGVDQTGHDASVQLAPPDEAAANPAFDVTHNRFVSGIITERGIFAPTDLATRFQDQIA NAGL >gi|319805658|gb|ADMF01000007.1| GENE 57 58525 - 59211 602 228 aa, chain + ## HITS:1 COG:STM2974 KEGG:ns NR:ns ## COG: STM2974 COG0235 # Protein_GI_number: 16766279 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Salmonella typhimurium LT2 # 11 226 2 215 215 200 52.0 1e-51 MLGSEEQAFEKRLALRMAVIDTAREMNRRGINVNKSGNVSARTSGGRSFFITPTGIPYES LEPDDIVEVSLDAERFEGRCLPSSEWEMHAEIYRRRPDAGAVVHTHSCYATALACQNLPI PAFHYMVATAGGRSIDVAPYATFGTRELAVRGANALEAKNACLLEHHGVLALGANLAKAL TLAAEVENLAHQYVVVRSLGTPRLISDDEMDRIVEKFKTYGHQIKEQK >gi|319805658|gb|ADMF01000007.1| GENE 58 59208 - 59465 250 85 aa, chain + ## HITS:1 COG:no KEGG:Mmol_0172 NR:ns ## KEGG: Mmol_0172 # Name: not_defined # Def: hypothetical protein # Organism: M.mobilis # Pathway: not_defined # 1 67 1 67 73 63 47.0 2e-09 MKKPIQPPAAWLRIDGSVVSCTESVKVLEENWHEAAELLSESYEDAVLLGVGKNEFKRAM HALIDALECDWAEKVAPIESIVKNK >gi|319805658|gb|ADMF01000007.1| GENE 59 59483 - 59983 359 166 aa, chain + ## HITS:1 COG:no KEGG:RSc2071 NR:ns ## KEGG: RSc2071 # Name: not_defined # Def: hypothetical protein # Organism: R.solanacearum # Pathway: not_defined # 28 161 35 168 173 90 37.0 2e-17 MKKLEAAALLVLIPIMLAACAHPQLIDLGTAESQVVQKLGEPNATVPLADGRTRLVYSQQ PFGQECWWMTFSADGRFEKLENVLNREHFALIKPGRSTEADVWNLFGQYAEKYEFRLKNQ HAWMYRFKDEGIFDMAFWVQFDTRGIVAEVGYTLDPYKDRDHWLFP >gi|319805658|gb|ADMF01000007.1| GENE 60 59987 - 61018 380 343 aa, chain + ## HITS:1 COG:STM0901 KEGG:ns NR:ns ## COG: STM0901 COG4643 # Protein_GI_number: 16764263 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 7 336 2 305 322 107 28.0 3e-23 MRERIDRIKNAAEGHWPEIFASVGMDAALFQRQNRPCPLCGGRDRFSFFAKEVGGRWYCR GCGMGDGIKLVQQFTKKEFVQTLDHLETLLGLPVPKGKQGRYERSAVARHKLWAEKQRAE QSALWEKAFPLGEIDRQTPVWRYLCARGLGDLVPSRELRFVKRLACWEVPDGQNIDGAAK ARLVGEFPAMLARLTNAEGKFITLHRTYLTADGSKAPVHSAKKLAAGAVENGVIRLYPAG GVVCLAEGIETALSVHALTGLPAWSVVSLSGMKRFGPETIPDGVRTIRICGDNDRSYAGA AGAYELASRLRRSRPELEVSVHIPQAAGTDWNDVLLAHGMLKL >gi|319805658|gb|ADMF01000007.1| GENE 61 61013 - 61891 907 292 aa, chain - ## HITS:1 COG:RSc2225 KEGG:ns NR:ns ## COG: RSc2225 COG0697 # Protein_GI_number: 17546944 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 2 285 19 302 324 186 40.0 4e-47 MQSLWMLAAAFLFSLMAACTKWCSDYFSTFELVFYRSLFGMVSLGLWVLWQKKDLRTHLW FSHIKRSCFGTLGLTIWFYTLAVLPLGTSMTLNYTSPLYMALFASVAAIRMGRSLNFGLL AAIVAGFIGVILALKPELHSGQEFAALIGLSAGFFSALAYSQVKELSRVGEPEWRIVFYF TLFGTVTGLIGHIATEGMLHPVRLNDLPGLLGIGITATLAQLSLTRAWGAGNVLLTSALQ FSAIVFAAVLGLLFFSEPISSETALGIAVIITAGVSATVISRKKNQALNSQL >gi|319805658|gb|ADMF01000007.1| GENE 62 61998 - 63803 2164 601 aa, chain - ## HITS:1 COG:RSc0466 KEGG:ns NR:ns ## COG: RSc0466 COG0173 # Protein_GI_number: 17545185 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 591 1 591 605 899 72.0 0 MRTVYSGLVDESFIGQTVTLYGWAHRRRDHGGVIFIDLRDREGLVQVVCDPDRPEVFSTA DHCRNEYCLKVVGVVRARPEGTKNPSLISGGVEVLCHELEILNPSATPPFHLDDENLSET TRLTYRVLDLRRPVMQKNLRTRYRTAMAFRKFLDANGFIDVETPALTRSTPEGARDYLVP SRVQEGCFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQPEFTQVDIETSFL NMDEIRGLMEELIRTVFKEVLDVDFVNPFPVMLWDDAMAKYGSDKPDLRISLRLHEVTDI VENSAFKVFSGVKSLHNGKVVAMCVPGAAQLPRSEIDSYTEFVKIYGAKGLAYIKVNELA RGREGLQSPIVKNLSDEELNGILTRVGAKDGDIVFFGADKAKVVWDSLGALRLKIGHSDF GVKTGLFTPGWKPLWVINFPMFEYSEEDQRWVACHHPFTCPLDGDEDKLLTDPEHCYAKA YDCVLNGWEIGGGSIRIHREDVQEKVFAALKIGPEEARQKFGFLLDALKFGAPPHGGLAF GLDRIVAMMVDAPSIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIKLRREVKKEEPA A >gi|319805658|gb|ADMF01000007.1| GENE 63 64134 - 64787 551 217 aa, chain - ## HITS:1 COG:NMA2020 KEGG:ns NR:ns ## COG: NMA2020 COG2928 # Protein_GI_number: 15794900 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 2 203 27 229 245 180 43.0 1e-45 MFKKFFSAGLLVWVPLAITFWALESIIRWSDSLVQLLPPEFRPDALIGFHIPGIGLVLAI ALILVTGIFAANVIGRWVVARWEKLLEKIPLVRPIYSGVKQIMETVLSNRTESFKEVVLI EFPKKDCWTYGFIVSTPGRAAAAETGYDDVVTVFVPTAPNPTSGYVLMAPRSQLKRSRVS IEDAFKFHVSLGVMSPKSLEAQSAVFQVQKDSDRPAI >gi|319805658|gb|ADMF01000007.1| GENE 64 64889 - 65113 237 74 aa, chain - ## HITS:1 COG:RSc0464 KEGG:ns NR:ns ## COG: RSc0464 COG2331 # Protein_GI_number: 17545183 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 67 1 67 112 80 58.0 6e-16 MPIYAYKCTNCGFEKDYLQKMSDKPITKCPKCGQDTMKKELSAPGFELKGTGWAATDFNG GPKAVPAAHVHGDK >gi|319805658|gb|ADMF01000007.1| GENE 65 65312 - 67360 2049 682 aa, chain - ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 665 3 675 690 391 34.0 1e-108 MSNYATENLRTLALVGHGSCGKTTLIEAMLYRAGMIPEMGSIQRGTTMCDNDLLEKEVGH SIRLAVAHIDTAMTDLTPVRIHILDTPGYPDYLGQDMSALDAVKSVCAVIDPTKGPELLT RRLMAMAKERGLCRMIVINHMDDPEADLEKCLRELQETWGPGVLPINLPTRNRTHVIDCF DREDGDSDIMTVDDVHRAFIERVVEEDDEMLERYLEEGSIDPRALHPLVTKALREGHVIP VCFCSAKKLIGIRDFMKVIIRHLPSPAEANDALFIKRDGTPFKTYPDKNLPLIAQVFKIV NDPFIGKIGIFRVHQGTLKKDDVIYVDDNKRAIKAPRPLILQGKHTQETDFLSPGDIGAI AKVDEVNYGSVIHGDPLDSGVRMRPINFPRPMYGLAIRPARRGDESRMNEVLAKMQSEDP TMSVEHDPVLNETVIRGLTDMHVRSILNRMRTNFKLEVETSVPSIPYRETISAPAEGHAR HKKQTGGAGQFGEVYLRVEPLPRGKGFEFVDQVKGGVIPYNLIPAVEKGVREVLSQGFVA GYPIEDVRVVVYDGKSHPVDSKEVAFVAAGRKAFLDALSKASPQVLEPIVAVEVSAPESY MGDIAGDLASRRGQVTNTEGLPGGEIQVMALVPLAELENYATRLHALTQGTGAWSMELAS YQPVPAAKQAELASHYQRKEEE >gi|319805658|gb|ADMF01000007.1| GENE 66 67686 - 68387 572 233 aa, chain - ## HITS:1 COG:RSp1455 KEGG:ns NR:ns ## COG: RSp1455 COG0745 # Protein_GI_number: 17549674 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 7 228 21 244 246 198 50.0 7e-51 MLKNPRRLLIIDDDVDFVTLLVDYFTLEGFDTVPAHNGPEGLAHLAREPFDLVVLDVMMP GMSGVEVLKKMREKSHIPVLMLTARGDPVDRIVGLELGADDYVQKPCPPRELVARINAIL RRSATAWAAAAPVIVGPVTIDPAQRSVNSAAGPIALTGTEFSLFELLARHAGTPVPKEEI YPKVLGRPMGPYDRAIDVHVSAIRHKVSAVIGKKIAIESIRGVGYQLVIHPDA >gi|319805658|gb|ADMF01000007.1| GENE 67 68625 - 70049 344 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 56 461 45 460 460 137 25 3e-31 MKTKLRFIPLACAVILTSTGCAVQSPDYSRLLSDAAPQQWTASTLPAGHIAAWQDFWARW EDPVLVELITKALAANPDIETAAANLRAANASVTSANAALWPTASLGLNGSRNHADGTGR NSFSAEVSGGLSLNLAGSEFWQADAATLKAMASAYTLEDVRAATAAATAEAYVNLRAAEA SLAVTKASLETYLETAETAQWQFQAGTGSASEAEDALMQVASSRAQIPTLGKNIIQYRNA LMRLTGCPVDELGLEPTGIIPVPPMGGAVSMPAELIEQRPDVRAAKATAEAAVKNLKSAK SDFFPTLSLSGNIGTTATAVSALGASGTGVAGLAAALAMPILNWGNLIAGEETATANLQS AVASYRSTLLSALEETDNALTAIRSAEYRKGDLERAVSHARTAEKLARDEYGAGIGEYTM LLSTQRSLLSARESELNNRADRANSYITLYRALGGDWAVNQSVGKSAAPTAAGK >gi|319805658|gb|ADMF01000007.1| GENE 68 70064 - 71365 936 433 aa, chain + ## HITS:1 COG:AGc3332 KEGG:ns NR:ns ## COG: AGc3332 COG0845 # Protein_GI_number: 15889118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 427 33 430 437 280 45.0 3e-75 MTDAKKNENSKAAVAELLGERKRPWYVRAVPAAVVLALAAGGGWYWWLGQQQGPKANYVT QTAKTGNLDVTVSADGTLNPIRTVTLGSELSGIVRKVNVDVNDEIKTDQVLIELDTRNLD SKVASARASLASAEAKLAESKATLKEAQVKDKRLKELNKLSGGKMPSRTDLDAQEAAVAT AKAAVEVAKATIADAQAALETAETDRSKANIKSPIDGVVLARSVEPGYAVAASLQAVELL SLATDLRELELKVNVDEADIGSIQSGQKAYFTVSAYPDKRFPATLTKVAYGATTTENVVT YTTYLNVDNADLLLRPGMTASATVTTAERRNVLLVPNSALRFTPRTSAVQDFSGSAATMF MPRGPHNGSSKRVKEDISASQSVRERTVYILRNGDAVPVSIKTGLTDGTRTEVISGDLKD GDQVVVDQQRAKS >gi|319805658|gb|ADMF01000007.1| GENE 69 71376 - 72098 331 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 226 1 219 245 132 37 1e-29 MSETPLIEFRGIGKRYGTGEAAFVALHHIDLQIQQGEFVAIMGPSGSGKSTAMNIVGALD RPSWGEYLFDGVHVENLTNDERALLRRRWIGFVFQGFNLLPRTTAMENVELPLLYRGLKR ADRQRLAAAALERVGLLEWAHHTPAELSGGQQQRVAIARAIVIKPKLLLADEPTGSLDSS RSIEIMKLLRDLNEEEDITIALVTHEPDMAAFARRHILFKDGKLVDDDHGAKLDFKGESM >gi|319805658|gb|ADMF01000007.1| GENE 70 72095 - 73303 382 402 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 8 402 11 413 413 151 27 1e-35 MIWNAFLLAIRQIWRNPLRSLLTVLGVVIGVAAVITMVTIGNGASTAIKTEIESFGNNQL MLRPGMRLGPGQKVGAPNFRLDDVTALRTQLAGIEAVAPQVSKSMTVVANGRNWQTSVVG TNTDYFTIDNRTFEDGRNFEEAEERAGSAVCVIGSTVANELFGTTQNVVGRQIRTGGFSC RVIGLLKTKGTAAMGGDQDDLLVMPLKSVQRRILGDNRVSALLIRINADSDRERLKTAVK DLMRERRSLSSGDDDNFQIMDTAEIAAKVASTTQIMTTLLAAVAGVSLLVGGIGIMNIML VSVTERTREIGIRLAIGALGREVLMQFLIEALMLGCLGGILGVLAALGASRLFCTLMNVP FVFDPGINLLAFTVSALTGVVFGFFPARRAAKLDPIEAVRHE >gi|319805658|gb|ADMF01000007.1| GENE 71 73403 - 73909 432 168 aa, chain - ## HITS:1 COG:VC0397 KEGG:ns NR:ns ## COG: VC0397 COG0629 # Protein_GI_number: 15640424 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Vibrio cholerae # 4 168 6 177 177 140 48.0 1e-33 MASVNKVILLGNLGADPDVRYTPDGGTAICTLSLATSRRYKNRDGQFTEETEWHRVVLFG RTAEIARDYLKKGRSVYVEGRLRTRKWTDQNGNDRWTTEVVCENMQLLGGRDGSGQGGPS GGYVPAGDGFESAPRPAAPRSPAAAPQPQASPAAASAPIDSLDEDVPF >gi|319805658|gb|ADMF01000007.1| GENE 72 73946 - 75160 882 404 aa, chain - ## HITS:1 COG:ECs0481 KEGG:ns NR:ns ## COG: ECs0481 COG0477 # Protein_GI_number: 15829735 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 392 1 393 456 286 40.0 6e-77 MASSAAHMTPQERTSSFSLASIFALRMFGLFIILPVFAVYARELPGGDSETLVGITLGIY GLTQGLLQIPFGVASDRLGRKPVIIFGLIIFALGSFLAASGANIWIVMLGRMLQGAGAIS AAVTAFIADSVRVQVLTKAMAMVGASIGLTFALSLLISPPLTKLWGVSGLFTLTGISALI AVLVVKFVVPPAPQSAIDEKNEHRSWRKVVCDPQLVRLNIGIFVLHAVLTAIFVVIPTRL VYMRLPSEHHWWVYLPAVIAGFALMAPPLIFGEKKQAVVRVMRFMIGFLTVAFVLFAYLI HSIWEIAFLLGIFFIGFNVLEATLPNLVSRIAPAADRGLALGVYNTTQNIGLFVGGALGG AISQHFGPEAVFFVCAFAMLIWFASSFGLQEPARPNREPGEVIK >gi|319805658|gb|ADMF01000007.1| GENE 73 75081 - 75245 130 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSAKILASEKLEVLSCGVIWAAELAMRKLFGWAMVWASAAEADILVTCGGYSP >gi|319805658|gb|ADMF01000007.1| GENE 74 75842 - 78067 1395 741 aa, chain + ## HITS:1 COG:VC0394 KEGG:ns NR:ns ## COG: VC0394 COG0178 # Protein_GI_number: 15640421 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Vibrio cholerae # 17 736 198 939 940 654 47.0 0 MHLDDISGGELLGEGAHVLELIVDRLRVRGDVRERIAQSLETALERGGGRAVVFDLDGES ESCDVWERRFSSKNACPLCDFVAGELEPGDFSRFSRRGACPHCGGTGLVDVLLAERLIVD PSKSLAGGAFAGNPSSTWRQMLMQTAAAAGLDVDAPWRQLPEAARRALLDAVQGAIEAYL RDATPSEKKVLSAFMTQVSCPDCDGSGLGIVGRTVRLDGQRFPELQALSIKDVALKLANL QLEGVRGEIVARAAAGARSKLACLENLGLDYLTLSRPGRTLSGGELERIRLAAQLGSGLS GVLYVLDEPTTGLHPKDAEALVQVLKRLQALGNTVLVVEHDRTVMEAADWLVDMGPGAGT AGGEVTAQGTLAALKANPHSLTGAWLSGQVQNALPRRHFNAAKADKLELKGAVGRNLKNV NLTIPVGGLTVITGVSGSGKSTLIVDTLLPALKAVVSKDAKAAGAGLPFSELYGAEYFDQ VVSVDQAPIGRSTRSNAASYTGAFTPIRELFAETLTARERGYSASRFSFLNHGGRCEACA GEGVVRVPMQFLPDLYVRCDVCGGARYNRETLECRWQGKSIAEVLEMTVDEARDLFASHP QIMRRMDALADVGLGYIRLGQSTADFSGGEAQRLKLAAELSRLSSSRTFYLLDEPTTGLH FADVAKLLAVLRRLTDIGATVVVIEHDMQVAACADWVVDVGPGAGEAGGDITAQGTPSQV ARMRKSLTASWLKDALKTLRS >gi|319805658|gb|ADMF01000007.1| GENE 75 78287 - 79306 763 339 aa, chain - ## HITS:1 COG:VCA0774 KEGG:ns NR:ns ## COG: VCA0774 COG1087 # Protein_GI_number: 15601529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Vibrio cholerae # 1 330 1 329 338 408 56.0 1e-113 MRVLLTGGMGFIGSHTAVSLLEAGHEPILYDNLSNADRSVVDRIGRITGHTPTFIEGDIR DGALLKQVLRNEHIEAVIHFAGLKAVGESVGKPLEYFDNNVSGTIKLLEAMRSVGVKRLI FSSSSTVYGTPQHLPLTEAEPTGEATNPYGRTKIHIEEILADLCRSDSEWSVVCLRYFNP IGAHPSGLIGEDPNGIPNNLLPYIARVASGRLPYLNVFGNDYDTPDGTGVRDFIHVVDLA QGHTDALPYAVSHTGWIAVNLGCGRGYSVLEVVKAFEDASGRRIPLHFAPRRAGDIAANW CDPTLALKLFGWKAKFGIEDMCRDSWHFESLLKTECETR >gi|319805658|gb|ADMF01000007.1| GENE 76 79443 - 81713 1246 756 aa, chain + ## HITS:1 COG:PA3339_1 KEGG:ns NR:ns ## COG: PA3339_1 COG1752 # Protein_GI_number: 15598535 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pseudomonas aeruginosa # 43 330 22 308 308 223 44.0 8e-58 MILRLPTLHHAVLTTAVVFLTISTSNWAKTPSEVRAACRAEGRPCVGLVLSGGGARGFAH VGVIKVLEELGVKIDVIAGTSMGSMVGGAYAAGFTSKALEDTVLEVDWSKMLAPRPQRDI LSWRRKLDDYKSLPSAGIEISNDGTPRFPDAFVPSEELDLFLARKTASSAMVEDLSMLPI PFAAPATNLVTGKRVVMQKDCTLSQAMRASMSVPGAFSPAKRGDDLLVDGGLVDNLPVEL AREMGADIVIAVNVGTPLSGREQLNDVVGVMSQMVNLLTEQNVTASLASLSDRDILIRPE LKDYTSADLDKSREIIAVGEAAGRAAADRLKVLAVGRQEWTAWNHARTQSFVNFDRSPKV ITEIRVAQQGDAAVPPERIVERAAVPSGRAADRERLDDAARTVWADGYFDSVVYRLDPGP DGSAALVIEPKEKRAGYSSVRLGGSLETDFDSVSTYNLLFAHSWHLLNAWGGEWRNEIQV GDKQRFLSEFYQPLGTTLPLFIQPSISYERMRFDRYSGHEAVAQWRSTFVDAKVLLGWEL ARWGYAGLSTGWLSSHTDIEIGRDQPPWRRKSAPYIGAELMLDTLDSVSFPTEGMRLQVN GKRSNQAVGLTESNYMFGINALVPFSVGRWTSVFEGEIGRSSVAGMYQLGGAGRMPGVPY GRWSGSRLEYVKASLMRNVSDWMPIRVPVWIGGALEAGRAWNDVHGLSSNDENDRAWAKS VSASIGVDSLIGPIFLVVGRTKGEGTSIYFRWGYRQ >gi|319805658|gb|ADMF01000007.1| GENE 77 81770 - 82243 461 157 aa, chain - ## HITS:1 COG:no KEGG:Rmar_1659 NR:ns ## KEGG: Rmar_1659 # Name: not_defined # Def: hypothetical protein # Organism: R.marinus # Pathway: not_defined # 6 146 4 143 145 75 36.0 7e-13 MLTITEFNDSLSLALAPITLISGVGLLMICMTNRYNHATNRIRQLMAKREGNIDNSIIRS VIDTEIDLLYMRASLLRRGMLSVALSAFFSAILVAVSVSARFLDLDIHILESCILVAAVL LIVLSALLFAGEINVSLKALKLAVDKVPRHGKWSLED >gi|319805658|gb|ADMF01000007.1| GENE 78 82255 - 82710 393 151 aa, chain - ## HITS:1 COG:no KEGG:Rmar_1659 NR:ns ## KEGG: Rmar_1659 # Name: not_defined # Def: hypothetical protein # Organism: R.marinus # Pathway: not_defined # 4 140 5 142 145 79 40.0 3e-14 MDSFAALLTNSITPVTLISGVGLMLLCMTARYNHTTDRVRQLLKRREDGDYEKEPDLDFE IHLIFRRSRYLRRAMLSLVLSDVCSGLIVATNVAAHLSNLNFVTLSSIWLAFALALIVAS SIYFSLEVRLSLHALETAIDHLPGKTKEPGL >gi|319805658|gb|ADMF01000007.1| GENE 79 82758 - 83276 466 172 aa, chain - ## HITS:1 COG:ECs2496 KEGG:ns NR:ns ## COG: ECs2496 COG2606 # Protein_GI_number: 15831750 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 7 163 12 167 167 187 59.0 7e-48 MIDNVLERLTTLFTEGGAHFRVIHHPAAGQSSQSVAEIRGTELGQGAKALCCTVKGNGVK KHVLGVLPADMQADLSKLAAAVGGRRASLASPDEVMDLTGCIFGAVPPVSFHPDLELICD PTLFTRYSELAFNAGSRDVSIIISTDDFKRIVAPKVADFLRDAASAPAEKQN >gi|319805658|gb|ADMF01000007.1| GENE 80 83528 - 83953 250 141 aa, chain + ## HITS:1 COG:ECs3825 KEGG:ns NR:ns ## COG: ECs3825 COG0816 # Protein_GI_number: 15833079 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Escherichia coli O157:H7 # 13 136 3 137 138 99 40.0 2e-21 MAKPLETFLSEPGTVLAFDFGLARTGVAVGNTVTRTAEPLVILDASTNESRWQSIEALMS EWKPKFLVVGVPRLGDGNPSTLTARCERFARQLGGRYHLRVFTVDERFSSVEVAQGRDHI DDRAAAVILEQFFHEAVTLAE >gi|319805658|gb|ADMF01000007.1| GENE 81 83995 - 84843 589 282 aa, chain + ## HITS:1 COG:NMA1504 KEGG:ns NR:ns ## COG: NMA1504 COG0204 # Protein_GI_number: 15794403 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis Z2491 # 32 239 37 232 255 117 39.0 2e-26 MRSIVGGARLILLAVVIVILFFLVVGIFPVVPDSMRVRMVKRWAPRLLRVLGIRLDVKGR IPNAEAASGLREDGPGYLVCANHISFADIFVLDSILPVRFIAKKEISKWPIFGLISKHVG TIFIDRSSRRAIVDVVEVMDKHLARGENVLFFPEGTTGPGDALLPFYANLFSAAKPAEYN GLEVLPITLKYSVNGIPSTMPSYASRDLFTVLKDIVRTKNVSVEATILTPIKAAAYDRRT LCAETSRAMAEALGWPDATAAKAEALRAKLAKTGTEKASAAE >gi|319805658|gb|ADMF01000007.1| GENE 82 84935 - 85801 492 288 aa, chain - ## HITS:1 COG:RSc0681 KEGG:ns NR:ns ## COG: RSc0681 COG0639 # Protein_GI_number: 17545400 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Ralstonia solanacearum # 16 283 10 283 283 242 48.0 8e-64 MVSSTTSTSSSGTLFAIGDLQGCLESLEELLTQLPQDAELLFVGDLVNRGPQSLQTLRFV KNLGSRARSILGNHDLHLLAVAAGAGEMHKKDTIADILSAPDRDELINWLRNQPLLIEQG DVLFAHAGIHPLWDLPTAQKLAQEAHEALAGPQWQRWLQGMYGNTQWSPDLTGEKRMRAI LNGFTRMRFVNALTGELDFDLKEGAGTAPKGWVPWFEYKHRLLCDHTICFGHWSMLGLIN RPNLVAIDTGCLWGGELTAVRFPDRRIFQEKCPCWANPLAFSKKHKKD >gi|319805658|gb|ADMF01000007.1| GENE 83 85967 - 86806 796 279 aa, chain + ## HITS:1 COG:NMA0848 KEGG:ns NR:ns ## COG: NMA0848 COG1210 # Protein_GI_number: 15793818 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis Z2491 # 1 273 1 271 289 324 61.0 1e-88 MKPVRKVVFPVNGLGTRFLPATKAMPKEMLPVVDKPLIQYAVEEAAAAGVTEMIFVTGRN KRAIEDHFDTYAELERELEMKGKQELLEIVREIVPPGVRCIYIRQPQPLGLGHAVLCARP VVENSPFGVILADDLIDAGRSCIGQLIEARARQGGGSVLAVQDVAPEETKKYGIVSVDDA AQGTPRLRGIVEKPEPAVAPSRLAVIGRYVFEPEIFDYLETVSAGIGGEIQLTDGIGASL ETVPTYAHRFEGTRFDCGSKQGFLDATIHFARKRGFRIG >gi|319805658|gb|ADMF01000007.1| GENE 84 86907 - 87779 712 290 aa, chain - ## HITS:1 COG:BH2748 KEGG:ns NR:ns ## COG: BH2748 COG2249 # Protein_GI_number: 15615311 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus halodurans # 75 186 4 113 198 82 37.0 1e-15 MKPAIPAVVLALTLSALTVQAADSISGASRRTAKSAAVIPKNIDAVTSASVVPQALRQSV KPNRFSLRPGVKRVLFVVGDPRSESVEWDLVNTAMKHFMDKGYDVELRDLYAIGFNPILT RENFYQAKDGFGKTPADITEEMMYVRSANFIVFCYPNWHDTPNTIVKGYMERVFQKKFAY RDAQNGLEGLLKGKGIFTIMNAGWVGMGRGDLGDGLPRAAGEKSNPIWDKYMTAFKTLDD DTAAFWGAKNLGRFVNDQTPGNLDEDYAAKLEQLRSDLRRHLDSKFSLKP >gi|319805658|gb|ADMF01000007.1| GENE 85 87875 - 88369 462 164 aa, chain - ## HITS:1 COG:RSc0309 KEGG:ns NR:ns ## COG: RSc0309 COG2870 # Protein_GI_number: 17545028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Ralstonia solanacearum # 2 162 3 163 166 207 62.0 6e-54 MSLRCPPPVFEQKICRLEDLAERAAALPHPTVFTNGVFDILHRGHVTYLAQARALGASLI VAVNSDASVKLLGKGDDRPINTQADRAAVLAALESVDLVVVFPDKVPLKAVELARPDLYV KGGDYEPENLPEAKLAASWGGRCVTITFEHLRSTTALLQKVRNA >gi|319805658|gb|ADMF01000007.1| GENE 86 88390 - 88956 312 188 aa, chain - ## HITS:1 COG:PM1727 KEGG:ns NR:ns ## COG: PM1727 COG0241 # Protein_GI_number: 15603592 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Pasteurella multocida # 1 179 1 184 184 167 44.0 1e-41 MKRAAFLDRDGVINIDHAYVHDREHFEWVPGVLEGARMLTDAGFLLVVVTNQSGIGRGYY TEADFHALTDWMCGVFAEAGAPIAAVRFCPHHPEKALGLYRRECRCRKPQPGMILDAAKD LNIDLSRSILFGDKPGDCTAGRSAGLPERVLLGTDGKCQPEACVDSTRTAKDLLSAVRSD WMTAFIRS >gi|319805658|gb|ADMF01000007.1| GENE 87 88956 - 89957 1144 333 aa, chain - ## HITS:1 COG:NMB0828 KEGG:ns NR:ns ## COG: NMB0828 COG0451 # Protein_GI_number: 15676725 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Neisseria meningitidis MC58 # 1 327 1 331 334 397 61.0 1e-110 MSILVTGAAGFIGCNNVIALNRRGITDVIAVDNLEKGDKFKNLAQCQISDYFDKRDFIER VRAGTAPRPDAIFHQGACSDTMETDGRYMMENNYRYTLQLYRWAQELRIPFIYASSAATY GAHTEFIEEVQYEGPLNVYGYSKYLFDQVLRRELSFLRAPVVGLKYFNVYGPHEQHKGRM ASVAFHQYFQYRRDHKVKLFEGCLGYGNGEQSRDFVYVEDVCKVLLHFLDKPVSGIYNCG TGRAEPFNNVSLAVVNGIRASEGKEQLTLQGAVAAGEIEYIPFPEALKGKYQAFTQANLT KLRAAGCDVNFRTVTEGTTDYMKVLLEEYPTVE >gi|319805658|gb|ADMF01000007.1| GENE 88 90048 - 90971 1035 307 aa, chain - ## HITS:1 COG:RSc0914 KEGG:ns NR:ns ## COG: RSc0914 COG2870 # Protein_GI_number: 17545633 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Ralstonia solanacearum # 5 306 14 315 319 347 64.0 1e-95 MDLAQLKRAHVLVTGDAMLDRYWFGDAERISPEAPVPVVRVTRTEERLGGAANVARNIAT VGASSTLLSVVGNDEAGQSIEKLLRAEGIQPELELDPALKTTVKLRVVARQQQLVRCDFE AMPAEETLKRHLGTFSKLLTTNQALVLSDYGKGGLSHISTMIAEARAVKLPILVDPKGDD YSRYHGATVITPNRAELRQVVGTWTSEASLIERAQNLRQALELDYLLLTRSEEGMTLFGP QGQLTVPAQAREVYDVSGAGDTVIGILAAMLATGMPIEEAVQIANRAGGIVVGKLGTAAV SYEELFG >gi|319805658|gb|ADMF01000007.1| GENE 89 91318 - 92703 1334 461 aa, chain + ## HITS:1 COG:RSc0691 KEGG:ns NR:ns ## COG: RSc0691 COG1109 # Protein_GI_number: 17545410 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Ralstonia solanacearum # 1 460 1 460 461 473 50.0 1e-133 MQVDSSIFKAYDIRGVVDKTLTEDVARAVGRVLGSLAVEANVSAFCVGRDGRLSGERLMN ALVEGIASTGMKVLDVGAVPTPVLYYATKYFNCGTGVAVTGSHNPPEWNGLKMMVAGITL FADAIQDIRRRVEAQDWIEATVPGVVEKVDAVTPYIGKALAGIKIGRRLKVAADAGSGIA GPVMLQLLSKLPVDVVPLFCEPDGRFPFHHPDPSKPKNLEDLIKTVKTEDCDYGFALDGD GDRLGVVTKQGEIIFPDRLMMLFAEDILKHHPGEPIVYDVKCSRKLVDWVKAKGGVPTIS PTGHSLVKAKLRDTHAPFAGEMSGHLFFNDERWTGFDDGLYAAVRLLEILSRTDDPSGVL SKLPNAVNTPELQIPMAEGEPKRFIERLRAEAGQFTDAADVIKVDGLRVEWKDGFALARS SNTTPVVVLRFEGDTPEALKRVKTRFIEVLRSIEPNLVIPE >gi|319805658|gb|ADMF01000007.1| GENE 90 92712 - 94157 973 481 aa, chain + ## HITS:1 COG:RSc1719 KEGG:ns NR:ns ## COG: RSc1719 COG0166 # Protein_GI_number: 17546438 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Ralstonia solanacearum # 14 464 28 509 539 318 38.0 2e-86 MSSSPSIPFLRESATGDASQAVACGIKLDLSRQRLTQGDLEGLFKFAAEKDLLGAHARMI RGECVNGSEGRPALHTSLRAFSLSAPRYAEVSQERRRLFDFAQRVRDGRWLGCRGDRIVD VINIGIGGSEMGPKAVWHALQTANPDIHLHFLASVDGVLLDRILAACNPRSTLVIVSSKS FSTRETQVNATAVDQWLLDNGIVGADRSRHMVVVSANPHAAEMMCLPLENQFAMWNWVGG RFSVWGGIGLPAIIALGPEAFQEFLQGANEMDRHSLEASIDQNLPALLALTAYWNSTVLK IPTHCLLPYDERLRVLVPWLQQLQMESLGKSHGINGERLKGRTGMLVWGSNGNEAQHSFY QWLRDGTGSTSIDLIWSEMPGHRYAEHYRVLLANARAQAEALVARDPKAPYFNAVSTIVL DAVTPRRLGAVMAMYEHKTTMLGTLYNINPFDQPGVELGKRLSKFAETGADPKKLLEEAR E >gi|319805658|gb|ADMF01000007.1| GENE 91 94187 - 95122 512 311 aa, chain + ## HITS:1 COG:ECs4499 KEGG:ns NR:ns ## COG: ECs4499 COG0859 # Protein_GI_number: 15833753 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 1 284 11 296 330 198 40.0 1e-50 MGDIIHALPVAHDIRQALPDARIDWVAEESFADIPPLASAVEKVYVTAFRRWRKSPFSVK TRREVSALKAELQAEHYDIVIDIQGLIRSGLVARWTKAPTVGYTRQTIREPLAAFFYQQH LDLPEALGAVKRYRMAAAQVLGYTIDPEHAVFGLKACGTAPLQTSGRTAAFAVNTSRDEK LWPEDHWMKLGCALAKEGISPVLYWGGAKEEARCRRIAAGIPGAAVAPKARLRDVAAGLA QAQLMIGVDTGLTHLAAAMGIPSVGIFVATPTATLRLIGDGPAESLGGIKQIPSVEDILA AAHRVMATETN >gi|319805658|gb|ADMF01000007.1| GENE 92 95128 - 96441 681 437 aa, chain + ## HITS:1 COG:RSc0693 KEGG:ns NR:ns ## COG: RSc0693 COG1519 # Protein_GI_number: 17545412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Ralstonia solanacearum # 8 425 6 433 438 305 42.0 2e-82 MKITPGIYRSVSTVALPLASLYLMWRSRRQPAYRDYWDERFAWGTYPLRTERPRVWIHAV SVGETNAAKPLLEAMLKSWPECDVVLTHMTPTGREAGKRLVRLAPERIRQCYLPYDAPYA VEKFVRQVRPTLGVIMETEVWPNLMHEMTAHGIPVVLANARESEKSRAQAQKAIEVMGPA FGSFAAVLAQSDEDKARLESLGAKDVLVTGSVKFDIVPDASQMAAAKAWLTVLSRPVVLL ASTRDGEEAAFLESFKKHPALLAETLVVVVPRHPERFERVVELFESAGLKTIRRSTLSTA EDLPADIQIVVGDSMGEMSFYCGLASMTVMGGSFGPFGSQNVVEPAMAGSPVVVGPSIFN FERIIREGIAAGGMVQAMDAEAAVLQLEQWLKHPEERNAAGAAAKNFAQKCAGATARMMT VLEKLWTYARKNESRMS >gi|319805658|gb|ADMF01000007.1| GENE 93 96357 - 97226 501 289 aa, chain + ## HITS:1 COG:YPO2859 KEGG:ns NR:ns ## COG: YPO2859 COG0351 # Protein_GI_number: 16123052 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Yersinia pestis # 26 288 5 266 266 254 55.0 1e-67 MRRRHGSHDDGIGKAMDVCTQERIPNVLTIAGIDPSGGAGLIADVKAISALGVYAAGVPT ALTAQNTLGVQGVLPIPAAFVKEELDSVFSDLTIDAVKVGMLNDGEVIAVVAAALRRYAP KWIVVDPVMVAKSGDRLLRRDALEALKHELLPLASVITPNLPEAADLLGQAEASTFEEMT VQGEALLKTTGADWVLMKGGHLKGQESDDCLMSLTERHWFSAPRIATENTHGTGCTLSSA IAAELARLNDVPKAVAAAKDYVAGAIAHADELEVGAGHGPTHHFWQLWC >gi|319805658|gb|ADMF01000007.1| GENE 94 97547 - 98875 444 442 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229870452|ref|ZP_04490046.1| SSU ribosomal protein S12P methylthiotransferase [Spirosoma linguale DSM 74] # 1 441 6 435 437 175 26 8e-43 MSAKKLYLRSFGCQMNDYDSNRIVDLLGEAMQLEKTEDLNEADVVVLNTCSIREKAQEKV FSDLGRIREAKRDRPDMMIAVGGCVASQEGAGIVKRAPWVDVVFGPQTMHRLPEMLGERA RTGKPQVDVSFPEIEKFDHLPAPRAEGAAAFVSIMEGCSKYCTYCVVPYTRGEEISRPLV DVLVEVAQLADQGVKEVTLLGQNVNAYRGVTPEGDTADFAMLLEYVSEIDGIERIRYTTS HPREFTQRLIDAYTKLPKLVSHVHLPVQAGSDRILTAMKRGYSVLEYKSIIRRLKAARPG IAIATDFIVGFPGETAEDFEKTMRLIDDVGFDASFSFVYSPRPGTPAARLPDETPYSVKL ERLQRLQRKIDDNAAEISRNMLGKIERVLVVGPARRGEGMLSARTDNNRIVNFAGDPSLI NQMTNVRITEVFPHTLGGELVD >gi|319805658|gb|ADMF01000007.1| GENE 95 98910 - 99995 807 361 aa, chain + ## HITS:1 COG:RSc0530 KEGG:ns NR:ns ## COG: RSc0530 COG1702 # Protein_GI_number: 17545249 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Ralstonia solanacearum # 27 329 19 316 325 376 67.0 1e-104 MTKEVMHTKAAAIEQLSFSASAGQTALAHLCGPLDENLRQMETILGVKIVRRGEQFRVSG EKHAAHRALRALEVLLDRVARTGAELTPNDIQWHFVGGDDEHRAKTANADEVSAGEVLLK TRRHDLRGRTPNQRAYLQAILSHDISFGIGPAGTGKTYLAVAAAVDAFERGTVERIVLTR PAVEAGERLGFLPGDLSQKVDPYLRPLYDALFDLMGFDKVQRLMERQSIEVAPLAYMRGR TLNNAFVILDEAQNTTGEQMKMFLTRIGFGSKAVITGDITQIDLPRGVLSGLKEAARVLQ GVRGISFTHFRSSDVVRHPLVARIVEAYDAAAVRDEIERRAEREHRKAEGTRSAEKDLHH A >gi|319805658|gb|ADMF01000007.1| GENE 96 99988 - 100446 514 152 aa, chain + ## HITS:1 COG:RSc0529 KEGG:ns NR:ns ## COG: RSc0529 COG0319 # Protein_GI_number: 17545248 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Ralstonia solanacearum # 19 146 126 255 255 147 57.0 6e-36 MHELTLHLQQAGLFKDKLPHRSTMARWIRAALELDGEFTVRFVDEEEGRELNHQFRRKDY ATNVLTFDYQREPVVMADIVICPAVLERQAAEQQKPLRDHLAHLLIHGVLHAQGYDHLDD EEAEVMEARETEIMESLGFPNPYSDRIGMVHD >gi|319805658|gb|ADMF01000007.1| GENE 97 100491 - 101354 581 287 aa, chain + ## HITS:1 COG:RSc0528 KEGG:ns NR:ns ## COG: RSc0528 COG4535 # Protein_GI_number: 17545247 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Ralstonia solanacearum # 18 284 12 276 298 234 48.0 1e-61 MKVPHAAENSMSSEPHLEKNKSFLDRLTSAFRSDEDAGDAKQDLIGALSEARADGLIGSD TFSMMQGALEVSSLRAYDLMVPRAQVDAVDLEKPTDEMIRTVIASGHSRMPAVEGDLDNV LGVLHAKDLLQLLLDPSRNVQSLLRPARFVPESQPLNVLLRDFKETRNHLALVIDEFGSI SGLITIEDVLEQIVGDISDEFDHDDSSTNIVAEDNHWRVRAVTPIEQFNTFFGADLVDEY CETIGGLITDRCEHVPQIGEEIVEKGYRFRIQRADARQVQLLTVERA >gi|319805658|gb|ADMF01000007.1| GENE 98 101372 - 102976 1069 534 aa, chain + ## HITS:1 COG:RSc0527 KEGG:ns NR:ns ## COG: RSc0527 COG0815 # Protein_GI_number: 17545246 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Ralstonia solanacearum # 18 502 32 501 523 155 32.0 2e-37 MRTLTLFRTKSIAARCVLCLVSGAIYAVAFAPWSAHLWGLTALLFGLGLIVSAQRPAQAA FFGFLFALAAFTIGLEWSVRSMHEFGRLPLVLAWVGEVLLAAVCALCWAAAAWVAIWLTP SRKALRWIALALTLTAAEWLRGAGGLDFGWLTPALATLDTPWASLAPLGGTMGVTFALLL SLTGVGALMTFLFSAFRRRRLEGSETALAVGIAIVVLGLSFWSGRQLWSTPGPAVALRLV QMDLPVVDGWTRPDSVTRLVETTKWMETPWEAAQKDLTRVVLTPEGILSADSVRPSAALR AAMGNFAAAAQGPVLFNGFRRGTEGNWYNSAFFVDAENRVATVDKRKLVPFGEFIPAGFR WFVDLLGIPLSDLAPGKPEQPNLNLGRGIYAGLLICYENIDGEVLRSFWADPERGPGIFF VTANLGWFAPSIIPQHLDMTRLLALASARPAASVNMNGRSAVVNARAEVVFQAPVSGRAV LDASLPTGIGNPTPFVRWGNIPTGIFWGCLLLLWALMRLRGHFSSNRTSRQAEG >gi|319805658|gb|ADMF01000007.1| GENE 99 103126 - 104037 1145 303 aa, chain + ## HITS:1 COG:RSc0526 KEGG:ns NR:ns ## COG: RSc0526 COG0752 # Protein_GI_number: 17545245 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Ralstonia solanacearum # 1 296 1 312 325 482 75.0 1e-136 MITFQEVILRLQEYWNRQGCALLQPIDLEVGAGTSHTATFLRALGPEPWRAAYVQPSRRP KDGRYGENPNRLQQHHQYQVVLKPAPTNIVDLYLGSLRALGVDTEVNDIRFVEDNWENPT LGAWGLGWEVWMNGMEVTQFTYFQQVGGLECKPITGEITYGLERLTMYLQNCDNVYDLVY TTWKEPDGSERVLTYGDVFHQNEVEQSIYNFEKSDCDKLLGQFDFYEGEAKRLMDLNLAL PAYEMVLKAGHTFNLLDAHGAISVTERAHYIARIRTISRSVAQSYYDSRERLGFPMLKKS EVR >gi|319805658|gb|ADMF01000007.1| GENE 100 104063 - 106153 2456 696 aa, chain + ## HITS:1 COG:RSc0524 KEGG:ns NR:ns ## COG: RSc0524 COG0751 # Protein_GI_number: 17545243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Ralstonia solanacearum # 14 695 14 696 697 586 51.0 1e-167 MTNLLVELQTEELPPKALRKLSEAFAEGVCKSLADAHFLADSSVTTAYGAPRRLAVHITD VLAKSPDETFRQKLVPVKVGIGADGQATPALVKKMAALGINCAVTDLERVDDGKNEQLYY EGVRQGVELASGLQHALEYAVKHLPIPKVMTYQLADGVTTVSFVRPVRHLTALLGTEIVP VELFGLKSGRLTRGHRFHTSEPIAIENADSYVEQMKAAFVMPCYDERRAVIEAELKRRAA ALDAEAIMPEDLLEEVTALTEWPVIYESQFESEFLAVPQECLILTMQLNQKYFALEDRSG KLMNRFLLVSQLIAKDGGKAISEGNARVVRARLADAKFFYDQDRMHTLESRVEGLRHVVY HNKLGSQYERMLRVRRIAAAAAALLGANKTEADRAAMLAKADLRTLMVGEFPELQGIMGE YYAENDKEPKDVALAIREHYQPRYAGDALPSTSVSLAVALADKLETLIGLFGIGQLPTGE KDPFALRRHALGVLRMLIEKELDVSLPALIDAAWEAEKDVAGVVDNRQELLTFFADRLRV MLRERGATAQEADAVLAKRLDKLADIPKRIGAVRAFMDLPEAEALTAANKRIGNILKKVE GEVSEKIDPALLQEAAEKNLFEELRAVEPAAEALYAEGRFEDMLVTIAALRSPVDAFFET VMVNAEDPALRANRLALLKRLYGVMNAVAEISRLAK >gi|319805658|gb|ADMF01000007.1| GENE 101 106310 - 107047 485 245 aa, chain + ## HITS:1 COG:PA0005 KEGG:ns NR:ns ## COG: PA0005 COG0204 # Protein_GI_number: 15595203 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Pseudomonas aeruginosa # 1 245 1 250 257 182 37.0 6e-46 MTFANNLRGWIFYFFLAISIIVLTVLLLCSWPFMSYERRYEAVCRPWAKCVLKLLDVICG VRWRAKGMENMPDIPCVVLVKHQSAWDPFWLGAFLKHPPCFIYKKSLHWIPCLGWALASM NMMAIDRSKGRQAFEQFMRRGPEFEKRGWWVTLFPEGTRVPMGEHVRWKTGGARFACSAG LPILPIAHNAAICWPKNSVGKCPGVIDVEIGPLIETKGRDPHTVTAEVEAWIEGRVNAMP QHAGH >gi|319805658|gb|ADMF01000007.1| GENE 102 107063 - 107794 530 243 aa, chain + ## HITS:1 COG:RSc0521 KEGG:ns NR:ns ## COG: RSc0521 COG1451 # Protein_GI_number: 17545240 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Ralstonia solanacearum # 43 233 82 279 288 102 34.0 7e-22 MSASLQRQLPHASSVSLIGRQVPYVTVANPRRKSISIYWTGRVEVRCPPGTTKRRVEAVL KEHADWVLAHLPAEGVPASRYCDGGVIPYRGGQAVLVLGQERSVIMKVGDRTEVWLKVPK GADEDAVKMALALALKKYAWRVINDCWMRVIETAPKLPVVWRLSSAKTRWGSCTSRDTIR LSWRLIARSDTEIEYVIAHELAHLKEFNHSPRFWAEVERIYPGAVQIHESMRTLKAADKL DDL >gi|319805658|gb|ADMF01000007.1| GENE 103 107846 - 108655 566 269 aa, chain - ## HITS:1 COG:RSc0518 KEGG:ns NR:ns ## COG: RSc0518 COG0030 # Protein_GI_number: 17545237 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Ralstonia solanacearum # 11 269 10 270 281 233 50.0 3e-61 MQAIVTQQWLEGHHARKRFGQNFLHDRHWIERIARSIDPKPGDELIEIGPGQAALTREVV SLAGHETAVEIDRDLAAFLRTQFTPEELTLIEADALTLDWKTVLPGKRLRVLGNLPYNIS SPLLFALLPAAGRIIDQHFMLQKEVVDRMTAVPGSKTYGRLSVMLQYRYVMHKLFDVPPG AFVPAPKVTSSIVRMVPKPVENLPAVDMSVFSEIVAAAFQQRRKMLRGSLSAFLDESSII SAGVEPTARAETLSVDDFVRLAREAAARR >gi|319805658|gb|ADMF01000007.1| GENE 104 108624 - 109586 445 320 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 6 308 11 323 346 176 32 6e-43 MTKLVITTGEPAGIGPEVSVKAAWKSTAPIILVGDREMLLRQAVQLGLPAEPPANISFEH VPLGTTVHAGVLDVRNSPYVLETLRRAHQICVSSTDAAVVTAPVQKSILSEAGEAFTGHT EFFEHLAGVKRVVMMLTSSPRQNALKVALATTHLPLRDVADAITPKVLDEVLAILKRALV RDFGIAHPVIAVAGLNPHAGESGHMGREEIEVITPALERAKAPGFDIVGPLPADTIFVPS KMERWDAVLCMYHDQGLPVLKHVGFAEGVNVTLGLPYVRTSVDHGTALDIAGRGIADARS MTAALELAQTLAGNRDAAMA >gi|319805658|gb|ADMF01000007.1| GENE 105 109673 - 111064 1355 463 aa, chain - ## HITS:1 COG:RSc0516 KEGG:ns NR:ns ## COG: RSc0516 COG0760 # Protein_GI_number: 17545235 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Ralstonia solanacearum # 37 453 77 493 498 264 41.0 2e-70 MTTMNKAFLYAFTLTALALSGASVQAASIMDSVPATPSAGEQAPAASGELDRIVAVVNND IITEHELEQRVHTVAINLRRQNIQLPAMELLRAQVLERLISERAILQRARQTGIRVDDQM VNASVEQIARQNNLSIEELRQRLAADGVNFASFRNEIRDEITTQRLREREVNEKIDISES EIDAYLAEQAGIKGDDKMEYHVEHILLPVETPAENDSVKTAAESLAKRARDGENFSSLAA SFSRADDAMKGGDLGWRSLNDLPATFAEALRANSTPGSVYVVSSQRAWHVFKLEDKRDGV QAKLGGGPVEQTHARHILMFVSDITPEGDVIRRLNDIKNRVQSGEADFATMARLHSVDST ATRGGDLGWLQPGDTVPEFEGVMNKLKPGQISDPIRTPYGYHLIQVVERRTEKDGNPERM RVAARQAIRQKKLAEASYEWERELRDQAFVEIRDPQLKDMLRR >gi|319805658|gb|ADMF01000007.1| GENE 106 111048 - 113366 2258 772 aa, chain - ## HITS:1 COG:RSc0515 KEGG:ns NR:ns ## COG: RSc0515 COG1452 # Protein_GI_number: 17545234 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Ralstonia solanacearum # 55 772 103 811 811 499 38.0 1e-141 MPLPPVRAVSLCVAAALAFIAAQARADAASSAVRVNLESVDSLDIKRAQADDAASFASAE RMEGSLADELELIGNAEVRRGGAVFTADRITYRHDTDEVTGKGNARISRAGASFSGPSMR FRITSREGSMDEAEWEYAPRNVRGCAKNIRFLSGNRTTFEDVSFTTCKRDDDSWFISMND LEIDEYDLTASGTGAVLHFQNVPIFASPWFAFPISNQRRSGFLTPTYGMSSTRGVDISIP YYFNIAPNYDYTLTPRVMTKRGVMLGNEARFKYDAFNAQVNLDYLPSDRTTKENRWSTRI QADYQRDKLGANIDYNRVSDDDFITDFSGNIRESSESVLPQDYSLTWTDTYWNSLLRVTK NQTLKIDGGTTVVPYERVPQMVLNAYNSDFHGFEFTTTVDATRFTHPTRLDGTRVVLEQS ASYPLRGAGWFIVPKAQIQGAWYQLNNLSRDHQYTDKSPSFVVPTFTLDSGLVFERDSHF FGREAYQTLEPRIYYAYTPYRDQSDIPIFDTTVSDLSFASLFTPNLYAGYDRVSEANQLT TVISSRWIDKSSGLELFRASVGQRQYFSDQNVRFLNTTEEANYFGNKDTPQSNVRSDLLA SVGARLTQSLTASASAQYSSSLNRMMNVKTGLVWQPKRRSTIGVFYRYNYSAGSVTDSTY DDNIKQVDFSVQWPITERLYGLLRYNYSLYQKKPIELIGGFEYLHDCWTLRFAAQRYTTA SNEQESNFFLQLELNGLGSIGINPISELRRNIRGYQTTGPLPTTADPYDYYE >gi|319805658|gb|ADMF01000007.1| GENE 107 113605 - 114615 804 336 aa, chain + ## HITS:1 COG:RSc0514 KEGG:ns NR:ns ## COG: RSc0514 COG3178 # Protein_GI_number: 17545233 # Func_class: R General function prediction only # Function: Predicted phosphotransferase related to Ser/Thr protein kinases # Organism: Ralstonia solanacearum # 9 336 18 352 352 343 52.0 2e-94 MKTERDITLEAWLSALAPAHGILLDTLVPASSDAGFRRYFRVGTSSGGTLIVMDAPPAHE NLPAYVQVNKLMAAAGLNVPRVYAADEMQGFALISDLGKETFLDVLNEENAAKLFDAATS ALVKWQKASRPGQLPLYDREVLLRELNLFPEWYVKRHCGVEWDAKHEKWWQMSVDAILKS NLADAKVFVHRDFMPRNLMVSDPLPGVIDFQDALMGPVTYDIASLMRDAFISWDEAFVLD VTIRYWEKARKAGIPVPDDFGAFYRSVEFMGVQRHLKVLGIFARINYRDGKPKYLADTPR FIKYVRQTAGRYVELSPLRHLIDELDGVRERAGYTF >gi|319805658|gb|ADMF01000007.1| GENE 108 114628 - 115350 538 240 aa, chain + ## HITS:1 COG:PA0597 KEGG:ns NR:ns ## COG: PA0597 COG1208 # Protein_GI_number: 15595794 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Pseudomonas aeruginosa # 1 235 1 221 224 172 47.0 6e-43 MRAMLLCAGEGRRLRPLTQLYPKPLTTIGGVPLAVRQILALKRAGITEIVVNAAYGARIL QAELGDGSRWGVHLAWSVEGHTAAEALETRGGIVRALPLLMAGSEDGAFIVAAGDIATDY DYAALAEQAQSLSASGDWAHLVMVANPTFHPQGDFRLVNGRIARRDAVGGEILTYASLAA FHPQLFAGLHADRAPLFPWMFEALDAGRVSGEKLVGRWANVGTLEELARAEDLFAAAGAA >gi|319805658|gb|ADMF01000007.1| GENE 109 115347 - 116318 623 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 1 317 28 345 353 244 41 1e-63 MKIGPHEFKFPLMLAPMAGYSDRSFREIVREWGADYAVAEMTASREDLRCRAKSLTRWVE RDEPGLHVVQLLGADPVVMAEAAKAAEDDGADVVDINMGCPAKKVLNTDCGSALMKNECL TAEILEAVRAAVEIPVTLKIRTGWDREHKNAPEIARIAEECGIAMLVIHGRTRADGFRGD AEYDTIARIKAERGIPVVANGDIVSGVKAQAVLRACGADGLMIGRGAVGRPWLFAEVRAA LEGRAWKPLENGAVLRHLLHHRAKHFDYYGARRGIVTFRKHLCAYLKPFSDPLELRPKLL RETDPQVQKALVEQFFSETAPAH >gi|319805658|gb|ADMF01000007.1| GENE 110 116372 - 116749 279 125 aa, chain + ## HITS:1 COG:NMA1632 KEGG:ns NR:ns ## COG: NMA1632 COG2901 # Protein_GI_number: 15794526 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Neisseria meningitidis Z2491 # 42 114 7 79 79 76 46.0 9e-15 MSSDDFALLDDSDLRLPEDAVDERFAELFEKQNATVRTINEDLEAVVIRQLDEYFAQLEG RTPHPLYDLVVHAVERPLIEYAMSMCHRNQCAAAQLLGINRNTLRKKLLEHGMLQARGRS KQKEK >gi|319805658|gb|ADMF01000007.1| GENE 111 116753 - 118306 1953 517 aa, chain + ## HITS:1 COG:RSc0504 KEGG:ns NR:ns ## COG: RSc0504 COG0138 # Protein_GI_number: 17545223 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Ralstonia solanacearum # 1 517 1 524 524 695 67.0 0 MRKQALLSVSDKVGIVDFARGLVSKGYHILSTGGTAKLLAKEGVEVEEVADYTGFPEMLD GRVKTLNPKIHAGILARRPIPEHMAALKEHGIDPIDIVCVNLYPFEQTIARPDCTLDLAI ENIDIGGPTMIRAAAKNYESVAVVVDPADYETVLAELDAYGEVQAATRFALAKKVFAHTA RYDGMITNYLTSLDAEDKPQQFPAVFNRQWEKVQDLRYGENPHQQGAFYREVSVAPGLLA GYEQLQGKELSYNNIADSDAAWECVRSFDVPACVIIKHANPCGVAVAATHEEAYAKAFLT DSKSAFGGIIAFNGPVTRSCAERISHQFAEVIIAPEFDEGALELFGQKKNLRLLKIALGS AHNDFEFKRVGGGLLVQTPDIQLATEADLRVVTKKVPTPKQISDMLFAWNVARFVKSNTI VYAKDGMTLGVGAGQMSRVDSARIAAIKAEEGGLSLAESVAASDAFFPFRDGLDVVADQG AVAVIQPGGSIRDPEVIAAADERGIAMVFTGERHFRH >gi|319805658|gb|ADMF01000007.1| GENE 112 118442 - 119746 985 434 aa, chain + ## HITS:1 COG:RSc0735 KEGG:ns NR:ns ## COG: RSc0735 COG0823 # Protein_GI_number: 17545454 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Ralstonia solanacearum # 29 433 27 431 432 387 53.0 1e-107 MKAFSQHSLSRRTLLGAGIAAGALSACPAFADLRIEITGVGANQIPIAIQPFQGASAAPT DPAEVIAADLERSGAFRRISVTQEASAENLEKPEGLAAAGKAGAAVYVVGAVQALSDGRW DVRCLFYDAVSGEQLDSIGVSAGKDLLRMAAHRCADRIYTRLTGEGAMFASQIAYVAQLA KRRYELIIADSDGGVPRTALQSPEPIISPTWSPDGRQLAYVSFEERKPIVYVHELSTGRR RKVANFRGNNSAPAWSPDGRELAVALSRDGLTQIYRINADGSGLKRFTQSYGIDTEPVYS KDGRWIYFTSDRGGTPQIYRQPVAGGAAERVTFGSSYAISPDISPDGMRMAYISRIDAEY RLAVMDLSTGQDMLVTNTNRDESPSFAPNGRFLVYATEVSGRGVLGTCSADARLTTRLYG EGDIREPAWGPILP >gi|319805658|gb|ADMF01000007.1| GENE 113 119793 - 120323 682 176 aa, chain + ## HITS:1 COG:RSc0736 KEGG:ns NR:ns ## COG: RSc0736 COG2885 # Protein_GI_number: 17545455 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 52 164 60 172 172 148 62.0 4e-36 MSISWKVLAAAAAVTAVLSGCSSVSLDEGNKAGTLAGEQSAAQTTAVNPFLDPANPLYHR SVYFAFDSYEVSPEYAAVVEAHAKWLAANPEVKIVIQGNTDERGGREYNLALGQKRSEAV LQRLQLLGIPSSRIEAVSFGKEKPIALGHSEEAWAQNRRADIVYPESVLKAQPAAK >gi|319805658|gb|ADMF01000007.1| GENE 114 120417 - 121163 622 248 aa, chain + ## HITS:1 COG:RSc0737 KEGG:ns NR:ns ## COG: RSc0737 COG1729 # Protein_GI_number: 17545456 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 12 242 37 271 274 117 32.0 3e-26 MSSFTQCIARTAIGLAALSAACSVQAFADDDARRAILELRESIKTLQTDLEANRNAQIQL STEINNLKELNRRLTGRIEELVNAQNQEKRNARTQYETLDKRLAVFEPQVVVIDGQSIEV SAEEKKAYDTAVALLQTGKYGDAEKAFKDFNDNFKKSPYRMDALFWWGTSAFANEHYKTA ISSQNQLLREFSKGARAADAMMLVASSQAASGSINAAKATLQKIIKTYPKTDVAKEAAQR IREFDQKK >gi|319805658|gb|ADMF01000007.1| GENE 115 121475 - 122057 779 194 aa, chain + ## HITS:1 COG:YPO1511 KEGG:ns NR:ns ## COG: YPO1511 COG0281 # Protein_GI_number: 16121784 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Yersinia pestis # 16 192 24 200 565 192 55.0 5e-49 MTQCDKLPASAIFHCPFVNKGEAFTKEERAKYGLSGLLPTAVSTVDQQVERMREMLNRFE KPIDKALLLDSIRNTNEDLFFQLLTRYTAEYMPVVYTPTVGEYCQRFSHIFRYPRGLFVS LEHLGHVREVIERAPNKEVDVIVVTDGERILGLGDQGLNGMGIPCGKLALYTACAGIAPE KTLPVVLDVGTNRE Prediction of potential genes in microbial genomes Time: Sun May 29 19:18:51 2011 Seq name: gi|319805605|gb|ADMF01000008.1| Sutterella wadsworthensis 3_1_45B cont1.8, whole genome shotgun sequence Length of sequence - 58393 bp Number of predicted genes - 46, with homology - 46 Number of transcription units - 30, operones - 13 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1108 1465 ## COG0281 Malic enzyme + Term 1161 - 1215 11.6 + Prom 1154 - 1213 4.7 2 2 Tu 1 . + CDS 1289 - 2266 779 ## COG1354 Uncharacterized conserved protein - Term 2274 - 2321 10.1 3 3 Tu 1 . - CDS 2422 - 4146 1958 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 4184 - 4243 5.3 - Term 4191 - 4227 9.4 4 4 Op 1 . - CDS 4294 - 6351 2253 ## COG0143 Methionyl-tRNA synthetase - Prom 6424 - 6483 2.4 - Term 6367 - 6418 8.1 5 4 Op 2 . - CDS 6557 - 7546 808 ## COG3181 Uncharacterized protein conserved in bacteria - Prom 7568 - 7627 2.2 + Prom 7528 - 7587 3.4 6 5 Tu 1 . + CDS 7767 - 8855 1005 ## COG0489 ATPases involved in chromosome partitioning + Term 8876 - 8927 12.0 - Term 8863 - 8915 12.2 7 6 Op 1 . - CDS 8960 - 10042 1022 ## COG0492 Thioredoxin reductase - Prom 10143 - 10202 2.4 - Term 10112 - 10164 -0.9 8 6 Op 2 . - CDS 10228 - 11748 1461 ## COG4783 Putative Zn-dependent protease, contains TPR repeats - Prom 11816 - 11875 1.9 9 7 Tu 1 . + CDS 11882 - 12358 492 ## COG0315 Molybdenum cofactor biosynthesis enzyme - Term 12363 - 12402 4.2 10 8 Tu 1 2/0.050 - CDS 12425 - 13174 534 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 13348 - 13407 5.9 - Term 13372 - 13414 3.3 11 9 Tu 1 . - CDS 13429 - 14331 753 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 14437 - 14496 3.5 + Prom 14617 - 14676 6.2 12 10 Op 1 . + CDS 14734 - 15168 569 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Prom 15176 - 15235 2.0 13 10 Op 2 . + CDS 15255 - 15659 537 ## HCH_05069 hypothetical protein + Term 15680 - 15726 7.0 + Prom 15824 - 15883 3.9 14 11 Op 1 . + CDS 15907 - 16620 527 ## PD0225 serine/threonine protein kinase 15 11 Op 2 . + CDS 16742 - 18406 1742 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 18426 - 18476 16.1 - Term 18413 - 18463 16.1 16 12 Tu 1 . - CDS 18497 - 19201 712 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA - Prom 19254 - 19313 4.4 17 13 Tu 1 . + CDS 19386 - 20225 900 ## COG1968 Uncharacterized bacitracin resistance protein + Term 20252 - 20297 14.4 - Term 20240 - 20285 10.6 18 14 Tu 1 . - CDS 20307 - 21026 702 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 21058 - 21117 2.6 - Term 21099 - 21140 10.3 19 15 Op 1 32/0.000 - CDS 21161 - 21814 736 ## COG2011 ABC-type metal ion transport system, permease component 20 15 Op 2 . - CDS 21807 - 22850 956 ## COG1135 ABC-type metal ion transport system, ATPase component - Prom 23075 - 23134 7.3 - TRNA 23128 - 23203 96.3 # Lys CTT 0 0 - TRNA 23255 - 23330 96.3 # Lys CTT 0 0 - TRNA 23351 - 23426 98.0 # Lys TTT 0 0 + Prom 23623 - 23682 3.9 21 16 Op 1 14/0.000 + CDS 23824 - 24969 1227 ## COG0468 RecA/RadA recombinase + Term 24995 - 25038 4.3 22 16 Op 2 1/0.150 + CDS 25039 - 26139 488 ## COG2137 Uncharacterized protein conserved in bacteria + Prom 26141 - 26200 1.7 23 16 Op 3 . + CDS 26228 - 26998 763 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 27029 - 27077 11.3 - Term 27017 - 27066 7.8 24 17 Tu 1 . - CDS 27084 - 28232 972 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain + Prom 28196 - 28255 3.8 25 18 Tu 1 . + CDS 28294 - 29415 493 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Term 29442 - 29480 6.0 - Term 29428 - 29467 7.0 26 19 Op 1 23/0.000 - CDS 29490 - 30221 951 ## COG1346 Putative effector of murein hydrolase 27 19 Op 2 . - CDS 30226 - 30582 325 ## COG1380 Putative effector of murein hydrolase LrgA - Prom 30708 - 30767 5.2 + Prom 30626 - 30685 2.1 28 20 Op 1 . + CDS 30761 - 30988 323 ## COG2501 Uncharacterized conserved protein 29 20 Op 2 . + CDS 31051 - 32313 894 ## COG2195 Di- and tripeptidases + Term 32353 - 32383 4.3 - Term 32335 - 32377 14.2 30 21 Op 1 . - CDS 32400 - 34079 1653 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 34106 - 34165 3.5 31 21 Op 2 . - CDS 34265 - 34804 706 ## COG4635 Flavodoxin + Prom 34973 - 35032 3.0 32 22 Tu 1 . + CDS 35105 - 35365 237 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 + Term 35409 - 35447 4.5 - Term 35397 - 35435 4.5 33 23 Op 1 5/0.000 - CDS 35460 - 36431 1038 ## COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 34 23 Op 2 . - CDS 36428 - 37021 554 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 37061 - 37120 1.9 35 24 Tu 1 . - CDS 37122 - 41225 2831 ## COG3164 Predicted membrane protein - Prom 41254 - 41313 4.1 + Prom 41308 - 41367 3.0 36 25 Tu 1 . + CDS 41421 - 44279 1572 ## COG1391 Glutamine synthetase adenylyltransferase + Prom 44288 - 44347 1.6 37 26 Op 1 . + CDS 44415 - 45395 531 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold + Term 45407 - 45455 1.0 38 26 Op 2 . + CDS 45481 - 46071 683 ## Krad_4383 protein of unknown function DUF165 + Term 46094 - 46136 5.7 + Prom 46102 - 46161 2.3 39 27 Op 1 . + CDS 46212 - 47219 901 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 40 27 Op 2 29/0.000 + CDS 47315 - 47956 760 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Term 47985 - 48024 4.4 + Prom 47995 - 48054 2.5 41 27 Op 3 31/0.000 + CDS 48239 - 50164 2443 ## COG0443 Molecular chaperone + Term 50269 - 50309 0.3 42 27 Op 4 . + CDS 50357 - 51526 988 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 51557 - 51595 7.6 - Term 51543 - 51583 4.2 43 28 Op 1 27/0.000 - CDS 51609 - 54710 2811 ## COG0841 Cation/multidrug efflux pump 44 28 Op 2 . - CDS 54715 - 55818 1022 ## COG0845 Membrane-fusion protein + Prom 56166 - 56225 4.1 45 29 Tu 1 . + CDS 56291 - 57640 1593 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 57725 - 57777 8.1 - Term 57788 - 57828 5.1 46 30 Tu 1 . - CDS 57941 - 58393 305 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319805605|gb|ADMF01000008.1| GENE 1 2 - 1108 1465 368 aa, chain + ## HITS:1 COG:VC1188 KEGG:ns NR:ns ## COG: VC1188 COG0281 # Protein_GI_number: 15641201 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Vibrio cholerae # 8 368 209 578 588 298 40.0 1e-80 TASRRYFAPEKTLPVVLDVGTNREEYLNDPLYLGLRQKRCRGPEYRQLVDEFIAEARRRW PNVLIQFEDFGNANAFKLLSDYQEKILCFNDDIQGTASVVVSGMYSAVRVKGEKMADQKF LFFGAGEAACGIANLLADALIDDGLSREDALAHCYLFDSKGLVTKARTDLAAHKQPFAVD APDTASFLEAVKTLKPTAIIGVAGQPQTFTKEVLEEMAKLNERPIIFALSNPTSKAECTA EQAYTATKGKALFASGSPFDPVEYEGKTFVPRQGNNSYVFPALGLGAVFSRSKWMPDGMF LVAAKVLATLVSDADLAQGSLYPALSDIRPVSVKIGAAVAAYAYEHGLAQNERPADLEKA VDEFMYRP >gi|319805605|gb|ADMF01000008.1| GENE 2 1289 - 2266 779 325 aa, chain + ## HITS:1 COG:RSc2386 KEGG:ns NR:ns ## COG: RSc2386 COG1354 # Protein_GI_number: 17547105 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 24 278 35 292 293 247 54.0 2e-65 MNPAELASAAVNSQTSSAASQPVARLYGEPMLEYPKDLYIPPDALEVFLERFEGPLDLLL WLIRSQKFDVMDIPMALLTEQYMAYVELIRRSNLELASAYLVMSATLMSIKSRMLLPKRQ DAETGEEPEDPRAELMRRLLEYERMRAAAKELDELPRMGRDFMAAAGGFIIVPEEELPAV TPEELALAWEAATARLALSAHHRVTREELSVREHMTAILKRLNGREFVRFTDLLQDRPDV QGICVWFLATLELAKIFLLSVQQAEPYGEIYLRTEEVPALTNAQADDADGVLTAEGDRTE EELRIFWRRRLMPGEQGTLFEDDIN >gi|319805605|gb|ADMF01000008.1| GENE 3 2422 - 4146 1958 574 aa, chain - ## HITS:1 COG:lin0896 KEGG:ns NR:ns ## COG: lin0896 COG0659 # Protein_GI_number: 16799969 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Listeria innocua # 22 546 4 520 544 355 39.0 1e-97 MSFKQQTRELLHRMPLARFHPVLLDSLADYNRHMLTRDISAGLTVGMVALPLAMAFGIAS GVPPEAGLYTAIIAGFLISLFGGCRVQIGGPAGAFVVIIYGIIAQYGISNLMLATIGSGI ILFFMGLFKLGGFIKFIPISIVIGFTNGIAVMIGLQQVKDFLGLTIAKMPADFFEMIKTL YAHISTFNPWAFAIAITSFLIIFFWPKGYSMGGPQWERWLAHLPGTVVVLVLSTLVVTLF NLPVETIGSKFGGIPQGLPSFELPDFDWQTAKQLYGSMLTLAVLGSIESLLCARVADTMT DDRHDPNQELMGQGIANFIVPFFGGIPATGTIARTVTNIKSGAFSPVAGMVHAVTLLLVI LAAAPLAASIPLSALAAILVFVAWNMGNWREFMRLKRMSLSYKATLLLTFFLTVVFDLTV AVEFGLVVACIFFLYRMNNITVVEPATLPFHMPDTVEAWHIRGALFFGSISKLEHVTDPH RLIAADSAKIVILDFTDLISIDNSAMDQIEVFVRALHRHNHELIIAGATGHSLRQLKRTG IADELGPNLVPDMDFAMARADLVLAEMAQKEAAL >gi|319805605|gb|ADMF01000008.1| GENE 4 4294 - 6351 2253 685 aa, chain - ## HITS:1 COG:RSc2381_1 KEGG:ns NR:ns ## COG: RSc2381_1 COG0143 # Protein_GI_number: 17547100 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 555 1 548 574 681 57.0 0 MKQRKLFVTTALPYANGAFHMGHIMEYIQADIWVRHERMCGHIVHFVGADDVHGAPIMIA AQKRGLTPQAFVAEIAAGRKQYLEGFHISHDYWGSTDSPENHELSQEIYRRLKNAGLIYT KDVEQFYDTVKGMFLADRFIKGTCPRCGAPDQYGDNCEKCSAVYSPTEVINPYSTLSGSR PELRTSTHYFFKLSDPECVKFLREWTTGNGKDGLPRVQEEVLAKDSEWLGTDGHLTDWDI SRDAPYFGIAIPDAPGKYFYVWLDAPVGYLAALKAYSEKKGFDFNEFLSDPETEQVHFIG KDIIYFHTLFWPAMLHFSGKPFRTPDHINAHGFMTVDGQKMSKSRGTGISPLQYLDLGMN AEWLRYYLAAKMNSRVEDVDFTKVDFAQRVNSDLIGKYINIASRAAGFIVKRFEGRILDA AMKDPLIERIKSRVPEVSAFYEVREFARATRLVMELADAVNEYVDEKKPWELAKDPAQAE ALHWVSSVALECFRLLTLCLKPVLPATAERVEAFLSIAPLAWASAAKPLSSVNSIKPYQH LMQRVDMVRQLDQLLPDHVPEPKVRAPGGEAIAPEVTIDDFSKMDLRVAKVIKCQKVEGS TKLLQFTLDVGEGKTRNVFSGIQSAYKPEDLEGRLIIMIANLAPRKMRFGVSEGMILSAS DADDKGLGLFVLSPDSGAVPGMRIH >gi|319805605|gb|ADMF01000008.1| GENE 5 6557 - 7546 808 329 aa, chain - ## HITS:1 COG:AGl312 KEGG:ns NR:ns ## COG: AGl312 COG3181 # Protein_GI_number: 15890266 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 319 7 322 329 174 36.0 1e-43 MKRRTLIQILGASALTSTLGMLTQPAAAQSTAGLIVPFPAGGGADVLARSIADAFGRELG LTFWTANHPGAGGTLGAQYLSRQHPDGGYVGYVTNGILCVNPLLYPKTPFDPMASLEPVG RISEIGLVAVLNPHAIEGVNSLETLLTFGRKNPGKLTFASSGIGTTSHLAGMLFSLRTGI EMLHIPYRGGNAAMMDVLAGRIPFMIDVAPNTLPHIRAGKLKALGSASPNRLAAAPDIPT LAECGLVGVELSAWDGIALPKGASPELVERYSAALSKALNDPAVSESLAKKGAEIRPGTP ADFRAWIASERPKWAELVKAVQAETATEN >gi|319805605|gb|ADMF01000008.1| GENE 6 7767 - 8855 1005 362 aa, chain + ## HITS:1 COG:RSc2379 KEGG:ns NR:ns ## COG: RSc2379 COG0489 # Protein_GI_number: 17547098 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Ralstonia solanacearum # 1 361 1 361 362 412 59.0 1e-115 MTISTAQVQERLAKLIDPVAGIDYVSGKMLKGVETDDAGGVTVKIELGYPARFAAQSVKA TVEAALKELGIENPVAEVTQNIIAHKVQGTQRVMPGVKNIIAVSSGKGGVGKSTVAANLA LALAYEGARVGVLDADVYGPSQPTMLGVHGSPMTVDGKTMEPLESLGLQVNSVGFMVDED QPMIWRGPMASGALTQLLTLTNWRDLDYLIVDMPPGTGDIQLTLSQSSPLTGAVVVTTPQ DIALIDAKKGLKMFEKVNVPLLGIVENMSVFICPCCGEVTHIFGEGGAKRMSEQYGVPML GELPLSPAIREAADSGRPTVAAEPESVAAKMYRAIAMKIAGSIAKLGKDYTARMPTISVK ND >gi|319805605|gb|ADMF01000008.1| GENE 7 8960 - 10042 1022 360 aa, chain - ## HITS:1 COG:mll0792 KEGG:ns NR:ns ## COG: mll0792 COG0492 # Protein_GI_number: 13470952 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Mesorhizobium loti # 16 353 4 341 343 357 54.0 3e-98 MAIEDFLTVAAPTNELIETDAVIVGAGPVGLFQVFELGLLEIKCHVIDSLRNVGGQCVEL YPTKPIYDIPAVPVCTSYELTENLLKQNHHFQPVFHLGEEVTEVKKLEDGTFHVETSLGS QFHCKVVIIAAGVGSFQPRPLRVKGIEKFEGTQLHYSCKDPSVFEGKNVVILGGGDSALD WTLNLVGKAESVVLVHRRDGFRAQAASVAKMKELCENWEMQFEVGQVTGFSEEDGRLTEV SVAGADGVTRRIPLDHLLVFFGLQPKLGPIETWGLHLERKQIVVDTARFESSIPGIFAVG DINTYPGKKKLILSGFHECALAAFAACDYVFPEKRVFLQYTTTSPKLHKVLGVETPTFDD >gi|319805605|gb|ADMF01000008.1| GENE 8 10228 - 11748 1461 506 aa, chain - ## HITS:1 COG:RSc0561 KEGG:ns NR:ns ## COG: RSc0561 COG4783 # Protein_GI_number: 17545280 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Ralstonia solanacearum # 27 505 64 555 561 306 39.0 6e-83 MQKSLRTLTALAACVFTVLTPALAAAAPAATQGSSVLDLNLPALGSAGSETLSPADEYRL GTQLMTRVRADPTYLNDPEISEYLGRLGYQLVSHAHTSTYNFEFFAIRDETLNAFALPGG YIAMHTGTIIAAQSESELAGVLAHEISHVAQRHIARMIEGQRSNLAITLGSVLLAILAAR AGGSSGGNAAAAIAMGSQAAMIQSQLNYSQNAEREADRMGIATLYSAGFDPHGMEDFFSR LQSTNRYYRSAAPAYLSTHPLTTERMADMENRTRQIPARMHVDSPDFKLIQVRARVVQET NWDGWTKLSQELSRERAKASGRETCVLDYGISVAQGFLKNADAAYDYAQKAMTCGIRSPI LERNLTRTEFNAAKTPQQKTAALSAARAAMNRYPLSGMMTSNYVDILYSLGRHEELINFL RTGTALSEGSSTYHALLARSYEALGKKSLQYMHTGEMYAQRGQTEAAVYQYDLAQKANDG DFYVMSEIDARLRELRRQFADEQKDR >gi|319805605|gb|ADMF01000008.1| GENE 9 11882 - 12358 492 158 aa, chain + ## HITS:1 COG:RSc0560 KEGG:ns NR:ns ## COG: RSc0560 COG0315 # Protein_GI_number: 17545279 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Ralstonia solanacearum # 1 156 1 156 158 202 69.0 2e-52 MAELTHFDAKGDAHMVDVGAKAQTKRIARARGEIHMAPATFALCAAGTAKKGDVIGVARI AAIMASKRTSELIPLCHPIALTHVSVDFELDEAKSKVVCIAQCECSGQTGVEMEALTAVQ VGLLTVYDMLKAVDRGMVMTEICLLEKDGGKSGHWLRS >gi|319805605|gb|ADMF01000008.1| GENE 10 12425 - 13174 534 249 aa, chain - ## HITS:1 COG:RSc3161 KEGG:ns NR:ns ## COG: RSc3161 COG2197 # Protein_GI_number: 17547880 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Ralstonia solanacearum # 15 248 13 230 231 100 33.0 3e-21 MTESVKSITQHHEPLRIFIAAESADETGKMARTFCDASDIVVTGSATHAADVDAAFAREC PADVLVCDVVLNGADMAPILERAKRTHPKLDILVVTACAQDAVVIRAVLAGATGYILKDS QENLLTSIRLLRGGGSPVSPTVARSVLRAIHARTITQPVPPKRDSAPPTSPVGRPVHQHA DDGRVLLSQRESEIIMLLAKGISFSEIGGILGISPHTVTAHIKKIYKKLGVHSRGEAVYE ATCMGLVSL >gi|319805605|gb|ADMF01000008.1| GENE 11 13429 - 14331 753 300 aa, chain - ## HITS:1 COG:AF1760 KEGG:ns NR:ns ## COG: AF1760 COG0589 # Protein_GI_number: 11499349 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Archaeoglobus fulgidus # 3 297 1 265 270 72 27.0 9e-13 MKILVPVDGSKNSLNAVQFIGSRKTLLGSEPKIELLNVQLPLPARACRLVGQDAIQRYYE DEAEKVFEPSRKILEKEGYQASEAFTVGEAAPTIAKAAEDIDADLIVMGSRGQSALKGLF FGSVSNGVLAQSKRPMLVIRDELPTPADSLRVGIAIDGSKYGRAAVRYVLKHLPLFGTQA TFYLINVVSDYAGAVMPDMAGMALPALSEEEVLELQREEFNEAMDPLRPLFAKSAVKTKE ICLVGNPGDEISAFARKRKLDIIVMGSHGYGRFKSAVMGSVATRIAASSNVPLLVIRTAS >gi|319805605|gb|ADMF01000008.1| GENE 12 14734 - 15168 569 144 aa, chain + ## HITS:1 COG:RSc1359 KEGG:ns NR:ns ## COG: RSc1359 COG0589 # Protein_GI_number: 17546078 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Ralstonia solanacearum # 1 144 25 168 168 139 52.0 2e-33 MYKRILVPTDGSERSVKAVEGAARFARPLGATLVVMTVVEPYSYTNLAEYRPESIEQYDE RVTAEAEERLEAARKIAVAAGVEVKTVMVKSFSPAEAIIEQAEKNGCDIIFMASHGRKGI AAVLLGSETQKVLTHSHFPVMVYR >gi|319805605|gb|ADMF01000008.1| GENE 13 15255 - 15659 537 134 aa, chain + ## HITS:1 COG:no KEGG:HCH_05069 NR:ns ## KEGG: HCH_05069 # Name: not_defined # Def: hypothetical protein # Organism: H.chejuensis # Pathway: not_defined # 8 116 3 111 127 103 47.0 2e-21 MAEDMQSDEQGMDAKMDPTALVREDVISDRRVGTIRMLTPITVEGVRDETRDVLFFGEAQ IMTQVGALPINFQIEAKTLAEAVEGYGEAAKKGLAETLEKLREMRREAANQIVTPGMPGF QAPPAPGGSGIVMP >gi|319805605|gb|ADMF01000008.1| GENE 14 15907 - 16620 527 237 aa, chain + ## HITS:1 COG:no KEGG:PD0225 NR:ns ## KEGG: PD0225 # Name: not_defined # Def: serine/threonine protein kinase # Organism: X.fastidiosa_T # Pathway: not_defined # 56 223 32 195 219 72 33.0 1e-11 MNQQVPTIQSNANASDFTFTREEFESAPTRQLLRDGRAANAIVWRLRKNGITWTVKDFSK RSWFVRTFIGPFLIRRELAALSRLKNINGIAGRAFRIDRSAMAVEFLEGDSLERIAPERI TVEYLRQLEDLISVMHSRGVVHLDLRGLGNVLVRPDGTPGLIDFQAAMCTNHWPKGLRRI LEAMDVSGALKRWKYFHPEAMGKERLERLEAINSVRRFWIFQGYFGIKRKKNQQKEH >gi|319805605|gb|ADMF01000008.1| GENE 15 16742 - 18406 1742 554 aa, chain + ## HITS:1 COG:RSc2913 KEGG:ns NR:ns ## COG: RSc2913 COG0488 # Protein_GI_number: 17547632 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Ralstonia solanacearum # 1 552 1 553 555 895 79.0 0 MAQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGAGKSTLLKIMAGVDQDHE GEAIPMAGIKMGYLPQEPALDPEKTVRETVEEGMGEVMQAQAKLDAVYAAYAEPDADFDA LAAEQARLEAIIAAAGTDAATQMEIAADALRLPPWDAKIGVLSGGEKRRVALCRLLLSRP DMLLLDEPTNHLDAESVDWLEQFLHRFPGTVVAVTHDRYFLDNAAEWILELDRGEGIPWK GNYSSWLDQKEKRLEIEKRQEDARMKAIRHELEWVRQNPKGRQAKSKARLTRFEELSSVE YQARNETNEIFIPVAERLGNNVIEFSHVSKGFGDRLLIDDLSFVVPPGAIVGVIGPNGAG KSTLFKMIEGREQPDSGEIKIGPTVRLAAVDQMRDSLPNDKTVFQAVSDGQDILQVGKFS MQSRAYLGRFNFKGGDQQKLVGALSGGERGRLHLAKTLLAGGNVLLLDEPSNDLDVETLR ALEEALLEFAGCAMVTSHDRWFLDRIATHILAFEGDSKVVFFNGNYNEYEADKRRRLGDE AAQPKRLRFKPLKH >gi|319805605|gb|ADMF01000008.1| GENE 16 18497 - 19201 712 234 aa, chain - ## HITS:1 COG:NMA1272 KEGG:ns NR:ns ## COG: NMA1272 COG3318 # Protein_GI_number: 15794203 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Neisseria meningitidis Z2491 # 4 232 2 219 220 63 26.0 5e-10 MDNDAKLIDSAEIEELQDRIEALESDQAMDAGVLDGYLTAQALNPLKPEDDDVLPFIFSD SGDPAALPNDDRLLELLKLRAREIRSALNAGAGLDPVIFPLVDENDEEILDGDGIEAVVP WCAGFMMGVQQWPDAAIEDEEVQAALLPIAARMAAEGDELDDETLTLWEAAKADVKPAKD LGDALYQMVDGVFTLKTLLVPNRPVRRNEPRVGRNDPCPCGSNKKFKQCCGKKA >gi|319805605|gb|ADMF01000008.1| GENE 17 19386 - 20225 900 279 aa, chain + ## HITS:1 COG:RSc0701 KEGG:ns NR:ns ## COG: RSc0701 COG1968 # Protein_GI_number: 17545420 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Ralstonia solanacearum # 1 278 1 293 293 271 50.0 1e-72 MDWLYLLQATVLGIVEGLTEFLPISSTGHLIIASDLVGFAETPGADEFVVAIQSGAILAV CWYYRERIWAVLRGLTSSPKEQRLAVNTVVAFLPAAVIGVFAAGYIKHYLFNPTAVAVAL IVGGFIILWVENRIVRLRITPRVAAMDDMSWKDALLVGCMQCLAMIPGTSRSGSTIIGGM VLGLSRRAATEFSFFLAIPTIFGATVYDLWKARDDLALDNLPGLALGTAVSFVSALLVVH WLLRFVAAHDFKGFGWYRIGFGILILAASGFGWIEWRSI >gi|319805605|gb|ADMF01000008.1| GENE 18 20307 - 21026 702 239 aa, chain - ## HITS:1 COG:NMB1328 KEGG:ns NR:ns ## COG: NMB1328 COG0220 # Protein_GI_number: 15677194 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Neisseria meningitidis MC58 # 17 239 19 237 238 251 53.0 6e-67 MEKKELTPEELEELKNRHIRSFVLRRGHISNAQKRALEEELPQYAVEYSASPLDFASVFG RKAPVVLEIGCGMGETTAAIAAAHPEVNFLGCEVFAAGVGALAKRLAEQSLTNVRIIRHD AVEVVRDMIPDSSLAGVHIYFPDPWRKARHHKRRLVAQPFIGMLVNKISLGGYIHCATDW ENYAEQMMEVLSGEPKLKNLYDGFSPVMGNPIAQRPQTKFQARGERLGHGIWDLVFTRI >gi|319805605|gb|ADMF01000008.1| GENE 19 21161 - 21814 736 217 aa, chain - ## HITS:1 COG:RSc0921 KEGG:ns NR:ns ## COG: RSc0921 COG2011 # Protein_GI_number: 17545640 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Ralstonia solanacearum # 1 217 1 217 217 215 65.0 5e-56 MSSQLINMISASFVETIIMVLISGGIGAAIGIPLGILLFITDRKSFLPMPKFHFVLSIII NATRSVPFIILLVAIIPFTRLVVGSSIGTAAAIVPLTISVAPFIARIVETSLREVDKGLV EAAQAMGATNLQIVGKVLLPEARPGILAGLTIAVVSLIGYSAMAGVVGGGGLGDLGIRYG YQRFMPEVMWPVVLVLIILVQGIQSMGDYLVRRLSHK >gi|319805605|gb|ADMF01000008.1| GENE 20 21807 - 22850 956 347 aa, chain - ## HITS:1 COG:RSc0920 KEGG:ns NR:ns ## COG: RSc0920 COG1135 # Protein_GI_number: 17545639 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Ralstonia solanacearum # 1 347 1 349 350 388 58.0 1e-108 MIKLEHITQTYVGNDGKVFEALKDVSISIRPGEIFGIIGRSGAGKSTLVRCINLLNRPTR GSVIVDGQDLTKLSDTDLRNVRRSIGMIFQHFNLLSSRTVYDNIALPLELVGTPKDAIRS KIEPLIHLVGLDAHVDKYPSQLSGGQKQRVGIARALANDPKVLLSDEATSALDPETTIAT LQLLKRINAELGVTIVMITHEMNVVKQICNRVAVMNLGEVVEEGDVIDIFAQPKTETTRA LIGQVMDRDLPQSIIDTVNRARSKEGHDNVHLLHLSFIGSEVAEPVISTASREFDINFSI LRGTVDDLQGRTLGTLTLLVTAPVAVYQEAVKYIRERGVLVEEIPNV >gi|319805605|gb|ADMF01000008.1| GENE 21 23824 - 24969 1227 381 aa, chain + ## HITS:1 COG:AGc3441 KEGG:ns NR:ns ## COG: AGc3441 COG0468 # Protein_GI_number: 15889174 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 342 62 393 416 449 67.0 1e-126 MAAKTTRKDPVERKEGDERKKALNAALASIEKQFGKGAIMRMADGVEQQNIEVVSTGSLG LDLALGVGGLPRGRIVEIYGPESSGKTTLSLQVIAEMQKIGGTCAFVDAEHALDIQYAQR LGVNVPELLLSQPDAGEQALEIVDALVRSGSIDLIVVDSVAALTPRSEIEGDMGDALPGL QARLMSQALRKLTTSVSRTKCLVIFINQIRMKIGGYGNPETTTGGNALKFYSSVRLDIRR VGAIKRADEVIGNETRVKVVKNKVAPPFKQVQFDILYGEGISRLGEIIDIGTDLKVLEKS GAWYSYDGRRLGQGKEKVRDLLAENPDLAKEIEGKIRELKGVHISSISAVDDEMPDMDQA EDSDAPVMPPVPEDTPADVDL >gi|319805605|gb|ADMF01000008.1| GENE 22 25039 - 26139 488 366 aa, chain + ## HITS:1 COG:RSc0552 KEGG:ns NR:ns ## COG: RSc0552 COG2137 # Protein_GI_number: 17545271 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 212 353 9 147 159 70 35.0 5e-12 MEILFEEEDLEPSQTASLSKDPLKKTARRHESSELSADALPQTGSLFGELEDSMGLEPVF EPAPIQNAASDRAARLFGEKPADTPQWFDDADRPEAVQLPDLDARPDVDPFGEMLLAEAS VKGNRVRSQAKEMKREKVPGRMTQSRGRSVKACTKADGPQIIRDPADVPSFTRIREDGTL LEIDPSTCTDPAMFAEMQAARSAGKPKKAKKSLMARAVDSLSRVEQPRRELERRLIKGLE DSETKEDVKAVLDRLEEMKLLSDQRFAEMKVRSAAPRMGDRKLQAELRRSGVDEATVRAA MEQLDEPEELRCWRVWCRKWSELPKDWKTREKMIRYLSYRGFGMGAIQKVLRGEVELPEE NADGEF >gi|319805605|gb|ADMF01000008.1| GENE 23 26228 - 26998 763 256 aa, chain + ## HITS:1 COG:PA1170 KEGG:ns NR:ns ## COG: PA1170 COG0861 # Protein_GI_number: 15596367 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Pseudomonas aeruginosa # 13 237 11 233 244 204 53.0 9e-53 MEYIWDLLVNLHWGAVGQIIMIDILLGGDNAVVIAMACRNLPHEQRAKGIFWGTAGAIAL RVVLITFAVMLLDLPFLKAAGGLLLLWIGVKLLIPEFDSHEKIEGSSKLLGAIKTIIVAD FVMSFDNVIAIAGAAQQAHEAHQTLLIIFGLVVSVPFIVFGSQIILKLLDRFPIIIYFGG GLLGWIAGGMMVSDGYVATHWPEFSFTAHYPACVVGALLVIIIGHFIAKKKRAEHEANLK LHRIDRSSAETAGKEA >gi|319805605|gb|ADMF01000008.1| GENE 24 27084 - 28232 972 382 aa, chain - ## HITS:1 COG:RSc2723 KEGG:ns NR:ns ## COG: RSc2723 COG0482 # Protein_GI_number: 17547442 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Ralstonia solanacearum # 17 381 1 361 370 540 68.0 1e-153 MLNFLNARILSGTTEQMSKGKVVVGLSGGVDSSVSAWLLKEQGYEVIGLFMKNWEDDDDS EYCSSRQDFIDATSVADVVGIDIEAVNFAKEYKDRVFSNFLEEYSAGRTPNPDILCNSEI KFRAFLDHAMRMGADWIATGHYARVQRPEGVDGPTELLRGIDPGKDQSYFLHRLSQEQIA RVLFPVGNMFKTDVRRIAEEISLPNAKKKDSTGICFIGERPFREFLNRYLPTQPGPIRTP DGKVVGEHVGLAFYTLGQRKGIGVGGQHDSTGEPWFVAKKDLKTNTLWICQGHDHPWLLS HELICVRPSWISGHAPEPNTPVTVRTRYRQPDEPTRLAAVGAQAFTLDCTDSPQWAATPG QSAVLYQGDVCLGGGFIDVVER >gi|319805605|gb|ADMF01000008.1| GENE 25 28294 - 29415 493 373 aa, chain + ## HITS:1 COG:SA0781 KEGG:ns NR:ns ## COG: SA0781 COG2070 # Protein_GI_number: 15926509 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Staphylococcus aureus N315 # 24 365 10 341 355 145 28.0 1e-34 MTEVNVAQEVLAAGQKRARDFAALLGIEHPVLNAPMPVEAGVELVAAVSEAGGLGVLSAA GRTPDELSKTVAAIRARTNKPFAIHLEMPANSLNSQELDAAKMLAEGLAPLFESLGLPNP SSAKGAEIYDFSGERRRAHFEAVFERVLELNPAAVVATFGGLREPEADALRDARIFNIAT ATTLHEAKVLRAAHCDAIVVQGSEAAGPRSSFEDADDTEVGLSSLIPAVAAATKLPVIAA GGLCSAEQALGAVLMGASAVMAGTAFLTTVEAHTSAYSRSAALWAAPQHLVRTRLYSGRL TQALRSPLLDALTDYAPHMPPWPAATGMMSALQQKAVELGRNDLEAVYFGQSVGRSAAHS AEDMVLTLARFIR >gi|319805605|gb|ADMF01000008.1| GENE 26 29490 - 30221 951 243 aa, chain - ## HITS:1 COG:RSc2670 KEGG:ns NR:ns ## COG: RSc2670 COG1346 # Protein_GI_number: 17547389 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Ralstonia solanacearum # 8 234 9 235 240 181 51.0 1e-45 MDLFLDAFAHLEKNPAFWLCLTLSFYVLGQVIFKAAKFNPFLSPIIISVVCLISFLVATG VPYETYFSGANFIHFLLGPATVALAVPIYEQRSKLARLWLPLLTGLLAGCTAAMVSVILI GGALGISSETLMSLVPKSVTTPIAMGISESLGGLPDLTAALVVLTGMTGSIIGRPLFKLL RIKSEPVCGCALGLSAHGMGTGAAFQISNRAGAFGGLAMGVSGIISAFLAPLLAFPVMQL LGR >gi|319805605|gb|ADMF01000008.1| GENE 27 30226 - 30582 325 118 aa, chain - ## HITS:1 COG:RSc2669 KEGG:ns NR:ns ## COG: RSc2669 COG1380 # Protein_GI_number: 17547388 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Ralstonia solanacearum # 1 104 1 105 125 70 45.0 8e-13 MLSSIAIILGYQVVGELISRLSGLPVPGPVIGMVLMLLSFLVKDNLINRVRPSAGVLLAN LSLLFVPAGVGIMRHGQRFLNEGVAIMIALVVSTVIAMIVTAYVIILMQKWLKLSDED >gi|319805605|gb|ADMF01000008.1| GENE 28 30761 - 30988 323 75 aa, chain + ## HITS:1 COG:DR1391 KEGG:ns NR:ns ## COG: DR1391 COG2501 # Protein_GI_number: 15806408 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 12 70 44 102 104 59 52.0 1e-09 MKQEVQFALKGEYITLDALMKAAGLAGTGGEAKVRIQGGEVKVNGEVETRRGRKLRGGEM VECNGTAVRISAETK >gi|319805605|gb|ADMF01000008.1| GENE 29 31051 - 32313 894 420 aa, chain + ## HITS:1 COG:CC3032 KEGG:ns NR:ns ## COG: CC3032 COG2195 # Protein_GI_number: 16127262 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Caulobacter vibrioides # 18 408 16 410 412 263 39.0 6e-70 MAGIPPLNSEVLSAVEKLAAKPEVRAAFAEAERDVDRAMREQIELCEIEAPTFHEENRAK RVAELMRTYGLKDVVIDPIGNVVGRRPGRGNGPVLALGAHMDSVFPAGTDVKVRQEGRIY HAPGIGDNCSGLRALLQILRMYEDNHIETEGDLLFVGTVGEEGNGDIRGSKALFDGSRHI DGFIAIDSTDVGRILKGATGSHRWRICVDGTGGHSYADFGHVPSAIHAICRAGAKIADFK VPEDPKTTFTIGTIKGGTTVNSIAAHCEVEVDMRSVNNEALLHLEAAVLKAFDEAVEEEN RCWNVVDEALKLKLTRTQIGNRPAGMRPDDCPVLQVSRAAQKCLGIELSKYICSSTDANA PMSLNIPSTCLCSGGRGMHAHSLTEYFEMVDTHLGPQLVFLASAALVGALGEKPVLPIRH >gi|319805605|gb|ADMF01000008.1| GENE 30 32400 - 34079 1653 559 aa, chain - ## HITS:1 COG:NMA1743 KEGG:ns NR:ns ## COG: NMA1743 COG0318 # Protein_GI_number: 15794636 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Neisseria meningitidis Z2491 # 6 557 5 551 556 556 50.0 1e-158 MSEFPWFASYPQGVPHEIDPDVYPNLSAVLDESAKKFPNHVGYTNLGADATYAQMKGYAE SFAAYLQSLPDMKPGDRVALMMPNLLQYVAAVFGILKAGMVVVNINPLYTPREVNHTLKD SGAKAIVVIENFARTVQKALDGAPCCHFITTGAGDMLPFPKGWLVNFIIRRVKKMVPEYS LPNPVMWTDALKIGRRLGFKPVEVTNDQLAFLQYTGGTTGIAKGAELTHRNVAANILQVS AWISSTFKEDEEVVLTALPLYHIFSLTATLVFTKWAATMVLITNPRDINKLVGECIKQNV SVIIGVNTLFAAMLRSPAFTPHALKNLKFTCGGGAQVQRVVAEDWLARTGVPILEAYGLT ECSPAVCGNIPGAPWDGSVGVPVSSTEVSIRGDGFRDLGVCPEGADPAEYTGEICVRGPQ VMRGYWKKPEETAAVMRDGWLRTGDVGHMDAKGVISITDRKKDMILVSGFNVYPNEVENV IASMPGVLEVGVVGVSSPKSGESVKAVIVKKDPALTADDVKNYCRSQLTRYKVPHQIVFV DALPKTAVGKILRRELKDL >gi|319805605|gb|ADMF01000008.1| GENE 31 34265 - 34804 706 179 aa, chain - ## HITS:1 COG:YPO3761 KEGG:ns NR:ns ## COG: YPO3761 COG4635 # Protein_GI_number: 16123898 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism # Function: Flavodoxin # Organism: Yersinia pestis # 4 178 3 174 177 127 37.0 9e-30 MKSVLVLYYSHGGHTARIARRIWETIIAEGHKADLMGIVEADREGVDWNKYDTVIIGCAV IYGKMNRELVAFVNRFKAVLDAKATSFFSVSLIARAEAKCTPEGNLYTRKFLENNPWKPK DAHCFAGKVDYPNWGWLDTKAIQMIMKMTKGPTEPTAIIDYTNWDDVPEYARHCLTLQA >gi|319805605|gb|ADMF01000008.1| GENE 32 35105 - 35365 237 86 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 70 1 70 72 95 57 5e-19 MAKEDLIEMSGQVLEVLPDARYKVKLDNGHELIAYTNGKMRKHHIRILAGDRVSLELSPY DLSKGRITFRHIEGRPPVQAAGQRRR >gi|319805605|gb|ADMF01000008.1| GENE 33 35460 - 36431 1038 323 aa, chain - ## HITS:1 COG:SMc02157 KEGG:ns NR:ns ## COG: SMc02157 COG4589 # Protein_GI_number: 15964242 # Func_class: R General function prediction only # Function: Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase # Organism: Sinorhizobium meliloti # 13 316 8 312 313 187 39.0 4e-47 MRLGFTIQEAYAFLFFAMVILAAAGSIYVSWSLGREMTPERHHRLTAVRSRLRMAWWLIA VFTIAFLLGMPALLIFFAFLSFFLLREFIAITPTKPSDHYALVIAFYVAIPIQYVAVGFD LPELYTLFIPVYLFLALPVIMALSQDTDRYLERVAKVQWGIMLCVFCLSHAPAIATLDLT RYNSSGPLLMLFFLLVIFVSDLCSAIASLLLGGRTLKTNINRTVLGVLFGGLGGILAGTC MYWITPFRLWQAVLMAFATVLAGALGDLVFNSVRRSMGGERLADESDLYMTRGLLARLAP ITFAAPVFYHLTTIFFITYKDVF >gi|319805605|gb|ADMF01000008.1| GENE 34 36428 - 37021 554 197 aa, chain - ## HITS:1 COG:SMc02158 KEGG:ns NR:ns ## COG: SMc02158 COG0204 # Protein_GI_number: 15964241 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Sinorhizobium meliloti # 4 184 6 187 203 194 52.0 1e-49 MTPIVWLTRLLVGAYPHWQGCAPSPRQRIYFANHTSHLDTIVIWASLPPELRRHVHPVAA KDYWSRGAIRRRIAINELRCVLIDRRRADHANPLDPLRDMLRTGDSLIIFPEGTRRPQAE PSPFKSGIWHLMTEFPHVEFIPVYIENLHRAMPKGVLIPVPTVCSVRFGAPIPHTPQDSK EDFLNRCRNAVIDLSKA >gi|319805605|gb|ADMF01000008.1| GENE 35 37122 - 41225 2831 1367 aa, chain - ## HITS:1 COG:RSc2657 KEGG:ns NR:ns ## COG: RSc2657 COG3164 # Protein_GI_number: 17547376 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 80 1341 124 1421 1426 298 24.0 7e-80 MLSEDEKGSPRTLLRERVLAALGWLLLVVFFIASIFILTARWFVTTQLSSHSDEIAAFIA ETTGIDITAERMDVGFTVIHPVISLHNVKLSRRGGPVSLSLPSVQAELSWSSLWHLEPRF STLIISHPTLDIRKVDENHWDVAGFAINTSLSTTSSEAEAGQRFSRWLFGQGRLMIEDGT FRYHDESSSTNGPLTLERVTAVFRQELFDYRTAVSGILMEGSTPRSFDLRARIRKNIFAL PDNPLTWSGELYGDLDRIRASELLKNLGLKGPLYSGIGSTRFWASFEQGRVTSITADLAL ADVRAQLAPKLAELRLPRLTGRLHYADDGSQTRFSAKDFTFTTINDARFGPSDIEAQCDH DVSGTVIGCSFKASELSLSNIAKIGTSLPLPAAALKLLRDRPFSGTLRQLNASFNGDYAD LGAWTFSSFFTGLSLPPANDGMPGVRNISGEISTSNPGEFEVDLDTHYATLYFPGIFRHP QMNFSSITGRVSAALHSTPKFTFTNITAVSADGTVRGSGTWESTGGAGTINISGTAEGVD GAAVHKYLPIVVGDPALDYVEAAVLAGRVSNGRWEVRGKLDDFPWDGAAPQEGHFLIEGD VTDGRMDFMPSRRAVTRSGRTEWAQGEHWPLLTNIVGRMQFEGNRMTITGHSASSGGLKA RDVVVEIPSFAADPVMLTVKGAAEGDLKDALAYLSTTPFLKEIYGESFDQSKGSGSVQTI LDLALPLTGNNAPKWSVTSTISNGRFQYLPILPEITQLSGTLLTADSGVLTPKPLVGKTS AGPITISATPNKNEAQLKIVGTVSGTDIERLMTGTAVVPIVKHLSGSAPYSVDTRISFAD GAVRITGETPAVDILSPLPAPLEKPAGRTANTQFTFFTKGGATNLEVIVDKLVSLDLHWQ GDALARGWIGIGLPMRKIDSGIEVGVKATKLDAADWLGIWDEIEDLVSTSQPNSSAKTGA KPSSLAAAALNRLTKIEVDIDDISWKESQLGGLVATLRQVPGIWHLRANGGVAAGQIEYQ PKAENGRGFLSVKLNRLNLPELPAAEDKPQNVTDPVPPQAPEPSTLRVSDLPDISLVIDE LSWGKRRIGKMELAAAADDPLTWRIQNLTIRNPGATISAQGAWSTTALDPVGRTSASFKA NVINAGTLLTSLDVKDAVHDAPGNADFQLSWAGHPGAFNTPTLSGRFHASAGAGQLLQVE PGAGRLLSLMSMQHLLQRLTLDFRDVLSKGFRFDSFRSEGTINNGVLHFTKSTVAGSAAT VVIQGDANFVTNLLDIKALVLPSLNGEAASLAVAIANPAIGIGSLIAQWMFKDQISSILS SEYSIAGPIDDPIVKKVESFGTRVERLEDRAKDAVKGTVRKQTHENQ >gi|319805605|gb|ADMF01000008.1| GENE 36 41421 - 44279 1572 952 aa, chain + ## HITS:1 COG:RSc2656 KEGG:ns NR:ns ## COG: RSc2656 COG1391 # Protein_GI_number: 17547375 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Ralstonia solanacearum # 42 949 50 949 955 695 45.0 0 MTFDSLVLSKIHLQDVPKLSSFVDRSLKAMLPAGSDDERLHRLQDLAAAPWTRDRIVERV RGVTDSTQLAYALRQLRRELMVSLIARNSTGCCGYDEVVDTMTALAEESVRAVVRVCARE LAERHGVPFGESGALQDLLVVGMGKLGGCELNVSSDIDLIFLYSEDGETRATPEYPNARR TLAVSEFYARLARRIIPALNDVEGPGFVFRVDMRLRPNGDAGPIVCSSEMLEEYLYTQGR DWERFAWLKSRIVSEPVFASPEQFEAQKADIQSLVTPFVFRKYLDFSAISSLTKLHEMVR AETDRREALRAREGCNVKLGRGGIREIEFIVQTLQVIRGGRDMKLRGKSTLRMIDALVHA GAIQPNVGEKLKTDYVFLRDLEHALQYVDDQQTQWLPHSGETLERAAGLFGAAPAELWAE VEKVREFVAATFDGVFHVNAEKAEVKDKDAWPLGWSEGAPSAPMLLEEKLRGFGYGDASE ELAGRILALVSGRRSAVLSEEARTRLRLLVQFVVERAPQWVEGAGPRVISQAEELSRYLK LLEAIAGRSTYAALLYQYPSACARVGRVLAASRWSADYVVRHPIVLDELVDARSTEMDDF TPVDWSKWRDALHEALTSAGGDQERQINYLRDAHHGAVFRLLVADLDGRFAVERLADQLS ALADAVIAEVLDLAWASLPNHPDEPPKFAVIGYGKLGGKELGYQSDLDIVFLYDDPNPDA DVIYSRLVRRMMSMLTVQTSSGKLFDVDLRLRPNGENGLAVCSFEMFSRYQRNMDGNGAW LWEHQALTRARFVAGDPELGRRFEQERAEILRMPRAIEPLKAEVLEMRRKMLEGHPNRTT QFDLKHSRGGMVDVEFIVQFMVLGWSASHPELVNNFGNILLLEMSARLGLIDGNLAQAAV RAYRRYRALQHEIRLNAGESVPARVPPELVAEERNTVLDLWRHVFGTAEPGK >gi|319805605|gb|ADMF01000008.1| GENE 37 44415 - 45395 531 326 aa, chain + ## HITS:1 COG:RSc0563 KEGG:ns NR:ns ## COG: RSc0563 COG0429 # Protein_GI_number: 17545282 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Ralstonia solanacearum # 2 322 22 350 371 268 43.0 1e-71 MPISESLYQAPSWCPGGHLQTVIPARVTARPHIAYRREIVETPDGDIVAWDWSTPEPADL NAPVLVHFHGLEGGSDSHYAEALMAKCAELGWRGLVAHFRSCGGLMNRKPRAYFAGDTAD NSWVLHTVKARFPNAKLYAVGVSLGGNQLTKCLGDLGSEAIGLVEGAVSICAPIDLVAGS ERMSKGVNALYADMFLKTLKRKLEDKARQYPDLFDLKKAQACRTMYDFDDIYTAPVHGFS SAMEYWQKCSAKQYLPGVRVPLLLLNAKNDPFLPAWVLPTAAEMSSSVVGEFPEEGGHVG FPEGPKFAGDLWYLPRRVMTFFGAGS >gi|319805605|gb|ADMF01000008.1| GENE 38 45481 - 46071 683 196 aa, chain + ## HITS:1 COG:no KEGG:Krad_4383 NR:ns ## KEGG: Krad_4383 # Name: not_defined # Def: protein of unknown function DUF165 # Organism: K.radiotolerans # Pathway: not_defined # 14 170 14 160 194 100 47.0 4e-20 MALNLNFPQGRIGRLGLISLVLFILTIPLGNWVVTNVGLVCDPHGPCLIPVWPGVWSPSA VMVAGLALVLRDAVQSILGNLWAVAAIAAGALLSYLLADPAVVLGSTAAFLFSELADFAV YTPMRRRFPSSAVVVSGLVGSVVDSMIFLSLAFGSLDYLFGQVLGKFWMSLLGGAVLWYI RYRQHRAEPAADAVAI >gi|319805605|gb|ADMF01000008.1| GENE 39 46212 - 47219 901 335 aa, chain + ## HITS:1 COG:RSc2643 KEGG:ns NR:ns ## COG: RSc2643 COG0276 # Protein_GI_number: 17547362 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Ralstonia solanacearum # 3 334 4 347 371 296 45.0 3e-80 MNFPDPLSPQYKAGVLLINTGSPDTPDAASVRRYLAEFLSDERVIELPKWKWWPILHGII LTVRPAKSAQRYKGVWTKDGSPLIVHTRNTAEKLQAALGADVKIEWAMRYGNPNVKKVFK SLAASCEKVLVMPMFAQYAAQTSAACVDEVLSTMLKMRSQPSLRTVRDYHLEPAYIDALA AQVKASWEQFGRHDEVGGMLVMSFHGIPKKSSELGDVYERQCKETAAALAERLELREGSW MVAFQSRFGREEWLTPYTLPTVQRLGKTCSRVDVICPGFAADCLETLEEIGDELRCAYQL ENPDGAFHYIPALNDSDKAVAAYETIIRRELGGWI >gi|319805605|gb|ADMF01000008.1| GENE 40 47315 - 47956 760 213 aa, chain + ## HITS:1 COG:RSc2639 KEGG:ns NR:ns ## COG: RSc2639 COG0576 # Protein_GI_number: 17547358 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Ralstonia solanacearum # 32 211 37 211 214 125 45.0 4e-29 MTDQNEQNQKSECCGGKCGDHHDHEHQCGCGAKPAAAEGGCGCSDKPAEAAKKETAEPTP QELKAQLKAAEQKVIEHYDLYVRAMADLENARRRSSEELVKTRKFAIEKFAENLLPVVDS LEKALEATAADKDSAAREGMEATYRQLMHALDVSDMKPIDPKGEAFDPHFHMAITMVPAP EGVKPGMVVQVFQRGWNIAGRVLRPAMVSVAQG >gi|319805605|gb|ADMF01000008.1| GENE 41 48239 - 50164 2443 641 aa, chain + ## HITS:1 COG:RSc2635 KEGG:ns NR:ns ## COG: RSc2635 COG0443 # Protein_GI_number: 17547354 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Ralstonia solanacearum # 1 639 37 684 688 855 74.0 0 MAKIIGIDLGTTNSAVAVMEGDHVKVMENSEGARTTPSIVAYLDNGEILVGAPAKRQAVT NPKNTLFAVKRLIGRRFDDAEVQKDLQLAPFSIVRADNGDAWVEVGGKKLAPQQVSAEVL RKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAFG MDKGGTSDRTIAVYDLGGGTFDISIIDIANVDGDKQFEVLSTNGDTFLGGEDFDQRVVDY LITEFRRDTGVDLSKDVLALQRLKDAAEKAKIELSSRQETEINLPYITADATGPKHLNIS ITRAKFESLVEDLVQRTIEPVSKALRDAKKDKSDITDVILVGGMTRMPRVQEVVKEFFGK DPRKDVNPDEAVAIGAAIQGSVLTGERRDVLLLDVTPLTLGIETLGGVMTAMIKRNTTIP TKHSQVFSTAEDNQPAVTIKVYQGEHEMAASNKLLGEFNLEGIPPSPRGLPQIEVTFDID ANGILHVSAKDKATGKENTITIKASSGLSEEEIKRMVSDAEANKEEDHRRFELAQARNTA DAAVGQVQKTLKEFGEKVESADRAACEDAIKDVEEKVKGEDKAAIDAAVERLMTAAQKIG EKMNKAAAEASQAQQAQSQQGQQQGGKDDDVVDADFTDVKK >gi|319805605|gb|ADMF01000008.1| GENE 42 50357 - 51526 988 389 aa, chain + ## HITS:1 COG:RSc2634 KEGG:ns NR:ns ## COG: RSc2634 COG0484 # Protein_GI_number: 17547353 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Ralstonia solanacearum # 1 387 1 378 380 429 57.0 1e-120 MAEQNYYEVLGVERGASQDEIKKAYRRLAMKYHPDRNPGDKAAEAKFKEVGEAYAVLSDE QKRAAYDRFGKAGVDPNAAGGFGGGQGGFGGFGGMNGGADFQSAFGDIFSDLFGGGRGRG AGPQGPQPTRGNDMSFTVEVSFEDAAHGRKMDIRVPAWEKCETCKGSGCRPGTSKKTCPT CRGAGVVRMSNGLFQVQQTCPHCHGTGEVISDPCPDCQGTGWKRTTTVLQINIPAGINDG QRIRVSGRGEPGVNGGPAGDLFVEVHVQPSKFFEREGDDLHMELPISFATAALGGEVTVP TLDGESRITLPEGTQSGKTFRLRGKGIRNLRSGTPGDLYIHVLTETPVNLSSKQKDLLRQ FDASLKEGGEKHSPKTEGIFEQMKNFFKK >gi|319805605|gb|ADMF01000008.1| GENE 43 51609 - 54710 2811 1033 aa, chain - ## HITS:1 COG:BMEI1629 KEGG:ns NR:ns ## COG: BMEI1629 COG0841 # Protein_GI_number: 17987912 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Brucella melitensis # 2 1032 1 1032 1051 899 47.0 0 MLSQFCIRRPIFATVLSLFIVLSGLIALRVLPLSQYPNITPPSVRVSATYDGADAETIAR TVAQPIEDQLSGIEGLLYFTTSIRSSGDMAIQCVFDVGTNPNDAMLEINNRVRTAERRLP AKVRDQGVSVRKRSEDELLMMALYSPDKSMTASDMADYANLNIVDELKRLPGIGDVSVFG NVQSAMRIWLDPDRMSKLGVTVKDVDNAVTAQNAQHAVGRVGTSPTLPEQQLFYKITTPG QLLTPDQFAGIVVKSDGPNGLVRLRDIATTEVGKRSYEFRVDMNGQPGVNIGVYLQTGAN AMAAASVVKARITELAQQFPKGHLDYTITNDTTVFVGASLNEVYRTLMEAGILVLLVVFV FLQSWRATLIPMLAVPVSLIGTMAGLWLCGFSLNTLTLFAMTLAIGIVVDDAIVVLENVE RLMRTEKLSPYDASIKAMKEVSGALVAIVLVLSAVFIPVAFLGGIAGELYRQFSVTVAIA VVISGFVALTLTPALCAILLKPTGDKPVSKPFRLFNQGLAAFTMAFLQVVRAALKHRIAS ALILIAVCIGGWQLLQITPTSFIPKEDQGVVRMAVQLPEGSAFPRTEEVAEGFLKKIQSL DGVQNVVTMMGFDTLGSDIKANAATFILQLKHWNERQQTADDYQQQLTKWLRESPDARGI AVLPAPIPGLGSSNGFSGYLTSHGSDNPLVLQGIAEGFIAELSKRPELTGLRTSLTADSP QLLLTVDRDRAYALGVDVDDVYETISAMMGSSYINDFTRNGKTYRVVMQAEAKYRSLPSD IGRASVRASSGEMVPISTLVTWERVSGPDSLTRMNGYLGSQIMGAAIQGVSSGEAIRIVE ETARDYLPPGYQVEWIGQAYHEKRIGASSATAFGFGLLVMFLILAALYERWSLPIAVVLA VPYAFLGAMTAVWLRGTANDIYFQIGLLVLVGLTAKNAILIVEYAEQKMEEDGKGPFDAA IEAAGLRLRPILMTSLAFILGVTPMLLATGAGSAARHSMGTGVFGGMLAATFISTIFVPV FFTWFAKKRKAKR >gi|319805605|gb|ADMF01000008.1| GENE 44 54715 - 55818 1022 367 aa, chain - ## HITS:1 COG:RSc0011 KEGG:ns NR:ns ## COG: RSc0011 COG0845 # Protein_GI_number: 17544730 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Ralstonia solanacearum # 9 356 12 375 398 134 31.0 3e-31 MNRTLVCCAAMSMFCSLMLAGCKTQSSAPAPREPLPVDIVAVKAADEAHWLETIGQAEAA AAVSVTTQATGRIIAQRYTEGDFVEAGAVLFEIDPANLKTQLASAEASRRALEVEFAQAD REFQRAEKLWKAQAASQKDYDDAKSLKNKTANELAQARAAENEARINLDWTAVRAPASGY VSKALFNPGSVVVKDSTVLATITQKNDVRVLFAPSDRDLAGADISTATRVRVFRASGEEL PASLDYVAQTFDAKNGTRTMRAKIPADSGVLPGEFLRIRFMTAVDRGAWRVPQRCVKQLP DGTYAVFVMQDGKAIQKAVEVGLWEGTDWIVTKGLADGDLVITNQLIKLQNGTAVKAAAK SSEKTAG >gi|319805605|gb|ADMF01000008.1| GENE 45 56291 - 57640 1593 449 aa, chain + ## HITS:1 COG:ECs5105 KEGG:ns NR:ns ## COG: ECs5105 COG2704 # Protein_GI_number: 15834359 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 18 449 15 446 446 478 62.0 1e-134 MLGYDFWIQLVVVLIALFYGARKGGMALGLIGGIGLLVLVFGFGVKPGKPPVDVILTILA VVCGSAALQAAGGLDCLLQIAERVLRRHPRAVVYVAPYICWFLTVLCGTGHVVYTMLPII YDVAIKNNIRPERPMAASTIAAQMGVICSPAAVAAVSMIALLDGYQVGGHPFGFVQLFSI VIPAAIVGLFAECTYSSFRGKDLDKDPDFQKLISDPEQKKYVYGETTTLIGKVFPKTAWA SLWIFLATIAFVALLGSEPSLRPVVGKKPLGMTQLIQMCMLTAGALMVMFCGVRAALISK TTVFHAGCVAIVAVYGVAWMADTMFMAHLADLKVILIEWVKAAPWTYALVLLLVSKLVNS QAAAIATIVPVALQIGTPPGLVVAFSSACYGYYILPTYPSDLAALQFDRSGTTHIGRFVI NHSFIVPGLIGVLTATAMGWVFGKLYGYI >gi|319805605|gb|ADMF01000008.1| GENE 46 57941 - 58393 305 150 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 2 143 425 564 570 107 38.0 2e-22 VFIILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVAL GYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVE VRNRVAQYRWSTETTARDQMFLELFFGESD Prediction of potential genes in microbial genomes Time: Sun May 29 19:19:43 2011 Seq name: gi|319805509|gb|ADMF01000009.1| Sutterella wadsworthensis 3_1_45B cont1.9, whole genome shotgun sequence Length of sequence - 122438 bp Number of predicted genes - 94, with homology - 85 Number of transcription units - 51, operones - 25 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 356 216 ## - Prom 376 - 435 6.7 + Prom 332 - 391 2.8 2 2 Op 1 . + CDS 508 - 1857 933 ## Gmet_1382 arylsulfotransferase 3 2 Op 2 1/0.000 + CDS 1936 - 3096 556 ## COG3203 Outer membrane protein (porin) 4 2 Op 3 . + CDS 3126 - 4070 -84 ## COG0583 Transcriptional regulator - Term 4415 - 4457 7.1 5 3 Tu 1 . - CDS 4486 - 8193 4126 ## COG1038 Pyruvate carboxylase - Term 8257 - 8281 -1.0 6 4 Tu 1 . - CDS 8385 - 9209 731 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase 7 5 Op 1 17/0.000 + CDS 10051 - 11100 1304 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Prom 11166 - 11225 2.3 8 5 Op 2 24/0.000 + CDS 11249 - 12106 885 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 9 5 Op 3 . + CDS 12130 - 12924 1096 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 12979 - 13025 -0.9 10 6 Op 1 . + CDS 13221 - 15125 2041 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 15159 - 15215 2.7 + Prom 15234 - 15293 2.6 11 6 Op 2 . + CDS 15367 - 16287 365 ## COG2897 Rhodanese-related sulfurtransferase + Term 16308 - 16359 11.3 12 7 Tu 1 . - CDS 16940 - 17086 115 ## - Prom 17169 - 17228 4.5 + Prom 17126 - 17185 3.6 13 8 Tu 1 . + CDS 17343 - 22145 5522 ## Ent638_0501 outer membrane autotransporter + Term 22318 - 22367 12.1 14 9 Tu 1 . + CDS 22388 - 22687 204 ## 15 10 Op 1 3/0.000 - CDS 22889 - 23626 568 ## COG1309 Transcriptional regulator 16 10 Op 2 22/0.000 - CDS 23680 - 24801 1057 ## COG0842 ABC-type multidrug transport system, permease component 17 10 Op 3 45/0.000 - CDS 24798 - 25976 1210 ## COG0842 ABC-type multidrug transport system, permease component 18 10 Op 4 10/0.000 - CDS 25973 - 27829 1516 ## COG1131 ABC-type multidrug transport system, ATPase component 19 10 Op 5 . - CDS 27826 - 28863 1172 ## COG0845 Membrane-fusion protein - Prom 28908 - 28967 2.5 20 11 Op 1 . - CDS 28975 - 29328 436 ## 21 11 Op 2 . - CDS 29340 - 32924 3697 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 32984 - 33043 3.9 22 12 Tu 1 . + CDS 33111 - 34475 1669 ## COG1114 Branched-chain amino acid permeases + Term 34504 - 34545 -0.6 - Term 34492 - 34533 7.0 23 13 Tu 1 . - CDS 34626 - 35474 577 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 35501 - 35541 5.1 24 14 Op 1 . - CDS 35624 - 35983 312 ## Glov_0887 hypothetical protein 25 14 Op 2 . - CDS 36002 - 37489 1700 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 37569 - 37628 3.3 - Term 37665 - 37708 6.1 26 15 Tu 1 . - CDS 37735 - 39189 1424 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 39253 - 39312 2.4 - Term 39297 - 39337 5.5 27 16 Tu 1 . - CDS 39363 - 40679 1412 ## COG2067 Long-chain fatty acid transport protein - Prom 40782 - 40841 1.8 + Prom 40884 - 40943 2.6 28 17 Tu 1 . + CDS 41087 - 42298 1182 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + Term 42333 - 42385 -0.6 + Prom 42307 - 42366 2.9 29 18 Op 1 2/0.000 + CDS 42403 - 43269 696 ## COG0565 rRNA methylase 30 18 Op 2 . + CDS 43330 - 44214 789 ## COG1045 Serine acetyltransferase + Term 44241 - 44287 9.1 + Prom 44339 - 44398 1.8 31 19 Tu 1 . + CDS 44427 - 45899 1237 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 45921 - 45970 11.2 + Prom 46069 - 46128 4.8 32 20 Op 1 . + CDS 46312 - 47907 1558 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Prom 47915 - 47974 2.6 33 20 Op 2 . + CDS 47999 - 50113 1960 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 34 21 Op 1 . + CDS 50230 - 50784 666 ## Hhal_0381 hypothetical protein 35 21 Op 2 . + CDS 50765 - 51544 807 ## Hhal_0380 cobalt transport protein 36 21 Op 3 . + CDS 51553 - 53055 224 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 37 22 Tu 1 . + CDS 53110 - 53646 785 ## COG3721 Putative heme iron utilization protein + Term 53766 - 53802 -0.7 38 23 Op 1 . + CDS 53940 - 54464 705 ## COG0716 Flavodoxins 39 23 Op 2 45/0.000 + CDS 54464 - 55378 558 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 40 23 Op 3 . + CDS 55378 - 56136 882 ## COG0842 ABC-type multidrug transport system, permease component 41 24 Tu 1 . - CDS 56146 - 57423 990 ## PC1_0985 putative lipoprotein - Prom 57490 - 57549 2.6 - Term 57531 - 57569 9.3 42 25 Tu 1 . - CDS 57661 - 59457 2324 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 43 26 Tu 1 . - CDS 59559 - 60479 960 ## COG0710 3-dehydroquinate dehydratase 44 27 Op 1 8/0.000 + CDS 60560 - 62551 1232 ## COG0642 Signal transduction histidine kinase 45 27 Op 2 . + CDS 62565 - 63203 611 ## COG4566 Response regulator 46 27 Op 3 . + CDS 63200 - 64654 1090 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Term 64888 - 64918 1.1 47 28 Op 1 11/0.000 - CDS 64925 - 67171 2927 ## COG1882 Pyruvate-formate lyase 48 28 Op 2 . - CDS 67220 - 67954 735 ## COG1180 Pyruvate-formate lyase-activating enzyme - Prom 68193 - 68252 3.5 - Term 68315 - 68354 6.1 49 29 Op 1 34/0.000 - CDS 68389 - 69123 277 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 50 29 Op 2 31/0.000 - CDS 69129 - 69887 1095 ## COG0765 ABC-type amino acid transport system, permease component 51 29 Op 3 . - CDS 70033 - 70809 1093 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 70873 - 70932 3.1 52 30 Op 1 . + CDS 71026 - 71229 116 ## 53 30 Op 2 . + CDS 71258 - 71509 191 ## Lebu_0151 addiction module antitoxin, RelB/DinJ family 54 31 Tu 1 . + CDS 72015 - 72725 634 ## COG2186 Transcriptional regulators + Term 72755 - 72798 6.4 55 32 Tu 1 . - CDS 72804 - 74225 1480 ## COG2079 Uncharacterized protein involved in propionate catabolism - Prom 74336 - 74395 3.5 + Prom 74316 - 74375 2.0 56 33 Tu 1 . + CDS 74457 - 75866 1600 ## COG0165 Argininosuccinate lyase + Term 75906 - 75962 7.0 57 34 Op 1 . + CDS 76039 - 77382 1606 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 77450 - 77499 5.0 + Prom 77384 - 77443 2.2 58 34 Op 2 . + CDS 77526 - 78863 1484 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 78895 - 78953 12.2 59 35 Op 1 9/0.000 - CDS 78969 - 81560 2099 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase - Prom 81590 - 81649 2.3 - Term 81598 - 81644 8.5 60 35 Op 2 . - CDS 81687 - 82514 1026 ## COG0024 Methionine aminopeptidase - Prom 82691 - 82750 3.0 + Prom 82756 - 82815 1.8 61 36 Tu 1 . + CDS 82880 - 83293 602 ## COG3111 Uncharacterized conserved protein + Term 83365 - 83408 8.5 + Prom 83301 - 83360 3.9 62 37 Op 1 38/0.000 + CDS 83540 - 84307 857 ## PROTEIN SUPPORTED gi|187478228|ref|YP_786252.1| 30S ribosomal protein S2 + Term 84390 - 84434 5.6 + Prom 84379 - 84438 4.0 63 37 Op 2 24/0.000 + CDS 84473 - 85360 556 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 85601 - 85650 10.7 + Prom 85654 - 85713 2.6 64 38 Op 1 33/0.000 + CDS 85769 - 86494 1177 ## COG0528 Uridylate kinase + Term 86518 - 86576 2.2 65 38 Op 2 . + CDS 86707 - 87267 854 ## COG0233 Ribosome recycling factor + Term 87314 - 87374 -0.7 66 39 Tu 1 . + CDS 87378 - 87569 101 ## + Prom 87601 - 87660 2.1 67 40 Op 1 . + CDS 87711 - 88421 726 ## COG0020 Undecaprenyl pyrophosphate synthase 68 40 Op 2 . + CDS 88457 - 89230 668 ## COG0384 Predicted epimerase, PhzC/PhzF homolog + Prom 89267 - 89326 1.6 69 41 Op 1 . + CDS 89447 - 90289 1132 ## COG0575 CDP-diglyceride synthetase 70 41 Op 2 . + CDS 90301 - 90939 548 ## COG1739 Uncharacterized conserved protein + Term 91024 - 91054 0.2 + Prom 90984 - 91043 3.0 71 42 Op 1 . + CDS 91087 - 92253 840 ## COG1408 Predicted phosphohydrolases 72 42 Op 2 17/0.000 + CDS 92322 - 93497 963 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 73 42 Op 3 18/0.000 + CDS 93539 - 94891 1368 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 + Prom 94921 - 94980 2.2 74 42 Op 4 . + CDS 95086 - 97404 3226 ## COG4775 Outer membrane protein/protective antigen OMA87 + Term 97444 - 97484 4.1 + Prom 97631 - 97690 4.0 75 43 Tu 1 . + CDS 97937 - 99361 797 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 + Term 99410 - 99453 12.2 + Prom 99591 - 99650 4.9 76 44 Op 1 . + CDS 99672 - 99824 66 ## 77 44 Op 2 . + CDS 99745 - 101379 2009 ## COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit + Term 101445 - 101486 8.5 78 45 Tu 1 . + CDS 101517 - 102434 1172 ## + Term 102488 - 102545 6.1 - Term 102486 - 102518 3.0 79 46 Tu 1 . - CDS 102549 - 104219 2042 ## COG2985 Predicted permease - Prom 104284 - 104343 1.9 80 47 Op 1 . - CDS 104400 - 105233 823 ## 81 47 Op 2 . - CDS 105311 - 107509 1704 ## COG0826 Collagenase and related proteases 82 47 Op 3 . - CDS 107506 - 108285 729 ## COG0666 FOG: Ankyrin repeat - Prom 108313 - 108372 1.7 - Term 108323 - 108356 0.4 83 48 Op 1 3/0.000 - CDS 108423 - 109364 640 ## COG0583 Transcriptional regulator - Prom 109398 - 109457 4.8 - Term 109408 - 109455 1.1 84 48 Op 2 . - CDS 109507 - 110529 524 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 85 48 Op 3 2/0.000 - CDS 110526 - 111566 959 ## COG1073 Hydrolases of the alpha/beta superfamily 86 48 Op 4 . - CDS 111621 - 112286 485 ## COG0716 Flavodoxins 87 48 Op 5 . - CDS 112298 - 113059 230 ## YpAngola_A2476 hypothetical protein 88 48 Op 6 . - CDS 113079 - 114119 697 ## Bmur_2509 hypothetical protein - Prom 114190 - 114249 6.9 89 49 Op 1 . - CDS 114311 - 115114 814 ## COG0084 Mg-dependent DNase 90 49 Op 2 9/0.000 - CDS 115104 - 117524 2247 ## COG0842 ABC-type multidrug transport system, permease component 91 49 Op 3 13/0.000 - CDS 117541 - 118596 1167 ## COG0845 Membrane-fusion protein - Prom 118632 - 118691 2.2 92 49 Op 4 . - CDS 118694 - 120118 1372 ## COG1538 Outer membrane protein - Prom 120195 - 120254 2.1 93 50 Tu 1 . + CDS 120471 - 121124 1023 ## COG5514 Uncharacterized conserved protein + Term 121189 - 121222 4.5 - Term 121171 - 121215 11.1 94 51 Tu 1 . - CDS 121294 - 122436 1528 ## COG0281 Malic enzyme Predicted protein(s) >gi|319805509|gb|ADMF01000009.1| GENE 1 2 - 356 216 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPERWNLREAAL >gi|319805509|gb|ADMF01000009.1| GENE 2 508 - 1857 933 449 aa, chain + ## HITS:1 COG:no KEGG:Gmet_1382 NR:ns ## KEGG: Gmet_1382 # Name: not_defined # Def: arylsulfotransferase # Organism: G.metallireducens # Pathway: not_defined # 1 445 168 623 625 645 68.0 0 MDPEFADRLYLINNFQGKSSKGTRVSWNNPEGGALEWNFEPQVAVIDTTGEIRWFMDASS IYDINSIWNAGCFMGFRQNDDGQISFGYGQRYAKIDLMGRTIFNRILPDNYNDFSHSMDN SPNGNYFLRVASSNYKFPNSDKHVRTVRDVIAEVNPATGNVVDEWRLFDILDPYRDTVLK ALDQGAVCLNIDAAKAGETMSAEDLAKIHTFGDILGTGPGRNWAHVNSVDHDAEDDSIII SSRHQSAAIKIGRDKEVKWILSSPVGWKSPWREKMLTPVDHLGNPLKCEGSTCEGDFDYP WTQHTAFKIDSKSKGDILYLSIFDNGDARGMEQPALPTMKYSRAVIYKIDQKKMTVEQVW SYGKDRGFEWYSPITSIVEYQKDKDSVFVYSANSGAKVNDRGAMVSAPNPTLMEFKWNAS KPSLEIQLENCAGYQAMPISVNAAFAPAK >gi|319805509|gb|ADMF01000009.1| GENE 3 1936 - 3096 556 386 aa, chain + ## HITS:1 COG:RSp0955 KEGG:ns NR:ns ## COG: RSp0955 COG3203 # Protein_GI_number: 17549176 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 14 363 4 333 368 72 27.0 2e-12 MNSSNNLHKFAVIALLTATALIVCSNGVFADETMIYGRVSTSLRVTKADGEPTKVDMNNE GSRWGLRTEEHINPDLSAKIWLESGFNSDDGGLSGTGGGNLDKMIFDRHAVLSLASKKWG EIGFGRMGSVRSAVMPYSLVLLPLDPVNGAYYDIASISVMFGADPRANNTVTYVSPRMRG FKFGASYSFATTDQEEPEITSNNRLLALGGNYEDGSIGVYFGATHVWHGKTSAASADRGK LYTRADAQAYTLGATYRPTDAWKFYTALQYHKNWRNVAGWKVDAGGGSASDKEYGVDGLS AMVGVNYWFTHALRGTFSYYLFDGSHKRPGKADEEGMRQSINAVIDYRLSKTLLLYGTST YSKGDNRLDNSDCTKWVSRVGLMKFF >gi|319805509|gb|ADMF01000009.1| GENE 4 3126 - 4070 -84 314 aa, chain + ## HITS:1 COG:RSc0144 KEGG:ns NR:ns ## COG: RSc0144 COG0583 # Protein_GI_number: 17544863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 28 312 22 294 321 75 26.0 1e-13 MDHFTPHEDLLDVKLRDLLFFLLIFEHRKLIDAAKAMKISVPTAERKLKSLRSAFGDSLF TRGGTKGFFMVPTQRAADLYPKIKTIVQTYQAARIEKPFEPLEIRNTFHLAVNSHGLFFI PEAFFQNFCERCPNAKLRIVRPTSDIFEMLRSGEADFGFSYRAAEPEDSGIHSYPIYTGK AIVAVRKGHPLEEVNASRMLSIGDLRPFTYVRLYSKSRKFANVRYLDECLSSEPLNFQGH IDSPFFLSGPLITRCTDAVCICPEIIAEPWRQAGLISCLDADFLQQTFTLHLVWHERTHV LPEFQFMRSLLLSK >gi|319805509|gb|ADMF01000009.1| GENE 5 4486 - 8193 4126 1235 aa, chain - ## HITS:1 COG:SA0963 KEGG:ns NR:ns ## COG: SA0963 COG1038 # Protein_GI_number: 15926699 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Staphylococcus aureus N315 # 16 1175 5 1128 1150 456 31.0 1e-127 MQQRTFEEVRESLRGKVILVANRGIPARRISRSIRERFEAIAAITATDIDKTEPAAASAQ ELILLGADPRAYLDLPRIIRLARERGCVAIHPGWGFASEDNNFPKLCAEAGITFIGATAE AMHLLGNKVEARRVARSLGIPVVPGSDESVDVPGARKIVHEIGLPIMLKAEGGGGGRGIF LVTNEDELEDAFEKASAMAEASFGNPRLFVEKYLPKVHHIEIQVIADRWGNVFAFDERDC TVQRNNQKLLEVTPSPWRGMTPKLRAELKDYARRLVLAVGYHSVATVEFLVTEAGEPYMI EVNTRLQVEHGITESRYGVDLVEEMIAIAFGSTLRFTEENTRASFHALQVRVNLEDPQEG FTPNSGLITRYVSPGGPGVRLDSNLSAGYEFPSNYDSAGALLITYARDWQKTLGIMDRAL QEYVIGGPKTTIPFLRRVVAHPSFRAGEVTTTFIKEHPEILRYTDLEPESERLAKLVAEI SARGFNPYVSLGEYRSKTTPKLAHFQPFSPELSEAARSRPSPYPQGDREDLLAFIRDTGR IHFTDTTTRDMTQSNHGNRMRLAEDRLVGPYLDSAGLFSIENGGGAHFHVAMLANMTYPF EEAREWNAFAPKTLKQLLVRSTNVLGYTPQPRNLMQLTGEMICEHYDVVRCFDFLNEADN MAPIAEVVLSRPDKLFEPAIALSRAPWFDVNYCLQSAEAVVDMTAKIMGVPEQTAVRRIT LGLKDMAGVCSPAFMTALVTALKKRWPELVLHYHRHAVDGLFLPACAAAAAAGCEILDAG LGASVRSYGQGDLLSLAAYLEDELGMKTLLDREAVAKANFAAKQVMPWFDRYCSPFFQGV DYDVTRYQMPGGATSSSQEGAVKQGYIQLLPFMLEFLECSRRIVRYHDVTPGSQITWNTA FLAVTGAWKRGGMPEVERLLNAVRTAGSKRTNLTQAERDERLIIYMDCNEAFRNLLLGKF GRLPLGFPEDWVYESAFGAKWREALRDRRAESPLLTLAPADLAGERVKLESLIKRPATEE EFVMYMNHPADALKTIEFRRRFGDPNALPLDVWFEGLRSGETLNFSSSDGKPHQMHILSI DPVTEEGFSTVRYVLDSEILTCAVKVKEGTGPKSTVLRAEPGNVYQVASPRKADLWIVHV SEGDIVKAGQELFNVSIMKQEKAVCAAVDGIVKRVLKRADFAQTRRMIPVEEGELIVELA PVPKRCTACGTPAFSRESLFCSVCGARLPDEAETK >gi|319805509|gb|ADMF01000009.1| GENE 6 8385 - 9209 731 274 aa, chain - ## HITS:1 COG:MTH1916 KEGG:ns NR:ns ## COG: MTH1916 COG0340 # Protein_GI_number: 15679898 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Methanothermobacter thermautotrophicus # 28 259 25 259 261 67 29.0 2e-11 MIPAPLLQSTDPASALGEPDPDGIYRIDETDSVLTLARSLYAADRLPVYGSIFANLQTAG RGQYGRAWESARGNLHAGVRLPLEGVYATRASAAATAALTAEALRSLGFPVLMKWPNDII CLSPNGPAKVGGILLEETDGLLTAGIGLNVNWSPEVSALREGAALPPGRLVPRGGAAMDP YELWRRILRHLREADPVRLTASWRALAQAHLLWLGNDVAVESAEGAMAEGRLIGLAPDGE LLLETPSGEMLTLDRGSLIKAAPAPHAAEAAPRN >gi|319805509|gb|ADMF01000009.1| GENE 7 10051 - 11100 1304 349 aa, chain + ## HITS:1 COG:RSc1198 KEGG:ns NR:ns ## COG: RSc1198 COG0715 # Protein_GI_number: 17545917 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Ralstonia solanacearum # 35 346 33 344 349 305 50.0 6e-83 MFQSFAFMSRRDFIAAAAMAAAGIVCSSPRGVFAAEPEKRSVTIAVGGKNLYYYLPMALA DWMGFYKDEGLDVKVVDFQGGSKSLQAVVGGSADVVSGAFEHTLSMQTKRQSMQAFVLQD RAPQCVFAINRRTMKGVKDPAALKGRRIGVTAPGSHSHVMANFVMARAGVKSNEYSAIGI GSGAGAVAAVRSGQVDAFVGLDPVVTQLEEADAIDIVVDTRRVEEGDALYNGPMVAGCLY APQTFIDRNPETVQRMTNAVIRSLKTIAAITPEELMKSVPKAAFLGNPKLYAECFLRNRP AMSIDGRFPEGCVETAAKALASVKPELADFKFDAAAAYTNRFVDAAKKA >gi|319805509|gb|ADMF01000009.1| GENE 8 11249 - 12106 885 285 aa, chain + ## HITS:1 COG:RSc1199 KEGG:ns NR:ns ## COG: RSc1199 COG1116 # Protein_GI_number: 17545918 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Ralstonia solanacearum # 17 277 4 267 270 360 65.0 1e-99 MSSETNEPIGAARKPAPAIAFENVTCSFETPEGVYTATKDVSFSIGDGEFVSVVGPTGCG KSTLLNAAAGLLKPAAGRVLIYGEALNGINHRAGYMFQAESLMPWATAIDNVMMSLKFRG VPENEAREAGFDWLERVGLERFADRYPHELSGGMRKRVAMAQTMIADPDILLMDESFSAL DIQTRQLMENELLELWQAKKKAVLFITHDLDEAIAMSDRVVVMSAGPASHPLGSFPIAIP RPRNVAEIRTRADFNECYSAIWEVLREEVLKSYREHRAHVGTLAS >gi|319805509|gb|ADMF01000009.1| GENE 9 12130 - 12924 1096 264 aa, chain + ## HITS:1 COG:RSc1200 KEGG:ns NR:ns ## COG: RSc1200 COG0600 # Protein_GI_number: 17545919 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Ralstonia solanacearum # 6 262 9 255 263 305 68.0 6e-83 MQRKGFQIRIWQWGLLAAIFVFWWAMTKPGFIPAFFFSDDSQAAFFFGEPVIILQRIWEW FAGGEIYSHLGVTLYETVMAFVIGTIAGLAVGLWLALSPVAAAVADPFIKGFNSMPRVIL APIFAVWFGLGPASKIALGFTLVFFIVFFNVYQGVREVNPNVLASAKMLGATHRQLLRYV YLPSAMSWVFSSLHTSVGMAFVAAVIGEYLGSAEGVGYLILQAETTFDMNTVMAGILVLT ACALILDRIVTEVEKRLMRWQPTV >gi|319805509|gb|ADMF01000009.1| GENE 10 13221 - 15125 2041 634 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 91 632 1 476 484 203 32.0 1e-51 MIRVSLLSVAAVLAFAAGTAPSAFAKDGVYTSTTLGRNGDVTVQTTITNGRIADVKVLDW SETHPIADLPRVKVPADIVKNQSLGVDVVSGATLTSFAIINGVRDALKQAGLNPADFSKK IAPQPKLTDTVKESADIVIIGAGGAGLSAAVTAAKAGKSVIVMEKTHYAGGNTSVAGGCY NAADPALEAKQEMSPQRRASVDALLAEPVRSKLHGELIQKVKEQLAQYDAKGGKYLFDSV ELHALQSWKAGDYAGNLDLVYELAKGAPEMQKELAEMGFKWNSGTEQVVGALWPRSNRAS NYKSGVGYIDTFLNEIKTKHLPVTFIMNTAASDILMKDGRAAGVVGTAENGRTFEVLAKD GVILTTGGFSANIDMRVQYDTIWDKKIGKGVMTTNVPSITGDGIKMAQKVGANLIDMGYI QLLPTTDPYTGATNHAVSLTTGIYLNTDGKRFVNELGRRDELARAALAQPGHKFFILATS DANKIDKEGRNQYGIKVADLIKSKKVFEANTWDELAEKAGINKENMKKTIADWNAFCRNP VNDPFGRVSCDPGVRLDGKGPFYATVFTPSVHHTMGGVQINGKAEVLDTKGAVIPGLYAA GEVTGGVHGKNRVGCNAVPDALVFGRIAALNAVH >gi|319805509|gb|ADMF01000009.1| GENE 11 15367 - 16287 365 306 aa, chain + ## HITS:1 COG:RSc2226 KEGG:ns NR:ns ## COG: RSc2226 COG2897 # Protein_GI_number: 17546945 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Ralstonia solanacearum # 42 300 46 293 296 119 35.0 6e-27 MEGVAMPAMPLFISVSEAASLPNCCFIDVRSRVVHGWDALGAYSRGHIAGAQFLAFDRVF AREPVFELGRHPWPDRRTVAAHLLGVLGPAGNAHHRVIFYDDGGMNFAARAALCARWAGF KNAQILDGGLSAWVRCGLPLNDGAPAAADHPAAERVNDFLRQTIAGAVPQILGKAAFFNA VKQGDRLVIDGRPRKRFAGRTENLDARPGHVPGAVNRPATENLDADGCLKSREALRREWG AVIGCRDPRSIVQMCGSGVAACLNAAALDADGILPIAEAVLYPGSWSQWAADSNLPAEIG CRDTAE >gi|319805509|gb|ADMF01000009.1| GENE 12 16940 - 17086 115 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYSISYSVVCLWYVNTMDLLTHGKSPRNDLHAASNKLGYHDCGRATQA >gi|319805509|gb|ADMF01000009.1| GENE 13 17343 - 22145 5522 1600 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0501 NR:ns ## KEGG: Ent638_0501 # Name: not_defined # Def: outer membrane autotransporter # Organism: Enterobacter_638 # Pathway: not_defined # 1003 1600 750 1371 1371 108 23.0 2e-21 MNRNFKVVFSKARGALMVVNEATSSVQAKGTKTVIAAAVAALSLGAGVASAADSQTFTEV TLGAGDVLTVTTETDANKYAVTGEIKGSVDGKDEAQTFTKDDTFGTDASIKLDGGKLVLQ NTEAFDVAVAAGSTGDIVVEAVDTTGNTYEKLAAGTYDKDLNIDLKTFNAKTNGKAGDAK VEVTGALTLKSGALTIGASDKSEGSAVLGTATLKATGALALGVRGTFYADGEVKTAGSVY DITNNGQKAVVEGSTVTYNKGTVTNSGDLTIQSLNGAVKITDQVGFANTGTITIGATNNK IEFGADYDTAANQGGQVFFSAPFQDIKLTGAVAADTVKVGAKATDEKNQIVFNGTLELSN GASLSAKTLTLSGNTLTVQANNLDDTASLTAEATTVDAADSKIEVKDYAAANLGAITIAD ASTAAGLTLTVDSDASASAKSLTIKAAGTNPATNAGTFALTGKLGIETLDNAAGGTVTIG ESGQVGALTLTSGASVNNGTIAFANASTGASTDSLVIAKDAALTNKGTLGSNADNGAIEV AGTLTNVNTPATTPAVNGTIKVKTLTVKEGGTVVADIDDGTVYGVAETTLEAGSTFKTAL NSFVADNPATGAAKDELTLVKTFNLNGGTLADADGNAVANYELGDNGVLNVNADQEFKAV KVNGTGAAFKVGGVNDDGVAAAVTVADLNLAKGSAEVNNESTLTVGKLTTASGQTLTVTD GTLNASLTAIGLTNTLAAGTGDAYGNVAANTIGLGVDGVFALSGFTDGQELTAANITTLK GKMATGFSGLVDLGNVAIKDLDTSKSIKLSALDDLKGFTTTALKSATIDGEGKAVTIANN SATYGKFEKTDGLTVNGVKLTLTGSGDLVTKVVNNAATLADVTLKDSGILAVTGQNAVIG NVTAAESTEGFFEVEQGGSLTVKGNVDVTELAVGADSSMTIDASKTDVPYTVKTGRLEVE QGGVFTAEAATVELTNTGSAGDESAGSIAGTAKVKSIKASGNGNFFVAGTLDVTDTLEMG TGTLYVGDANRSAGTLTVGTLKSGTVNVSADWVKNEGVSIASFKTLELGTTVLADQKAVV TIGTDAYTADAVKALTGFTIAESPVSGDKAVDAKVSGTVNNAIVVDASDIIKGVVRTDAT GASGNYIGQNNLLVIDALTADTTGERAVFGESLTLAKGSVLYLDNAANGQAIKMSATDYN ANGANVVYEGDLLLNVDRKTNTNLLVVGIEDKADVVNAIGDVAGLDAIYGMYEKGENVGN TNAKFFRDLMSSQTSSAYDKTTGEWNFQTIRTTLNDVAAIGATTGAQAVTMDAVNQMADT VAARTSILTQRAQGVNVWVDVNGGRFEGKKVMDGAGYSSDIYAGTLGADYQFANGAVLGA ALTIGTADTDSKGTTAKTSMDSDLVGFSVYGSKTFADIWNVAGDIGYLQASNDVTESGYG FGDFSEDVNAFTLGVRGEVLTKAGSVNIVPHLGLRYTRLSTDSFKAGFNTEIDDQNIFQM PVGVTVSADFETSGWTIAPKFDLSVVPTFGDKDADLKLGITGVSASDDLSVRVIDSNPVQ ATLGVSATNGAWGFGLNYKLGVGSDDRMNNSFNASVRYAF >gi|319805509|gb|ADMF01000009.1| GENE 14 22388 - 22687 204 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKSRAETSGTLSGEFADRVRPPYASDEKRRQAAELFEHGIGYQRASRILDLPANTLRDW ARAWRAGKFRTTISPHLYRYSDAVKRKAVRMRQKRTHLA >gi|319805509|gb|ADMF01000009.1| GENE 15 22889 - 23626 568 245 aa, chain - ## HITS:1 COG:AGl2069 KEGG:ns NR:ns ## COG: AGl2069 COG1309 # Protein_GI_number: 15891152 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 187 99 293 294 81 30.0 1e-15 MAKKSEDRRRSILNAALDEFEAKGFSAALVEDIAHRAGVSKGTIYGYFKGKEALLLGLAE EVAVLIQKEFDQPSEHASLPLIERLWRTEAGLLADNGHGRLARILRVVWSEGLHRPELTR PIYEKFLIPHFAPGSPLRTEIEASNVPDFVKKYPMVLMAPVMQGIFWAGIIDKVMPLNLE EYFKGYLTMIFGVQPQSETTGIQGTNDEAPKASNVKPKKASGSSQPLTNPSADRAHPKTD PKSSC >gi|319805509|gb|ADMF01000009.1| GENE 16 23680 - 24801 1057 373 aa, chain - ## HITS:1 COG:ZybhR KEGG:ns NR:ns ## COG: ZybhR COG0842 # Protein_GI_number: 15800543 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 EDL933 # 18 372 3 367 368 202 32.0 7e-52 MTRSNRFQLLDALLASVNRIIAIAGKEFVALLKDKGSRLILVVPVIVQAVLFGYGATFNL ERVPWTYYDASHSSSSMEVVRRITGTGIFELKAAPRSLGEFEATISSSTALLGLYFPPDF EKNGQVFAAADARNSTTAGVAMGYVNSIVAQINADRGRSAAFAVVERYRWNENGITRYAI IPSLTIMLSMLQVLLLSGLSVAREREEGSFDMMLMTPASSLEILAGKAVPPTIIACLQAL AIFLIGLFWFELPFAGSYLTLGLFIVGISLCFVGVGLAISALANNIQQSMVMVIFFLLPC VILSGLFTSIRAMPEWLQTLTLINPLRHAIVALRAIYFENAGFADLVPSLIPIVLAGVLS LAWASWLFRHKIQ >gi|319805509|gb|ADMF01000009.1| GENE 17 24798 - 25976 1210 392 aa, chain - ## HITS:1 COG:SMb21205 KEGG:ns NR:ns ## COG: SMb21205 COG0842 # Protein_GI_number: 16264619 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Sinorhizobium meliloti # 9 348 18 351 384 199 36.0 9e-51 MNALRFSPRRFLSLLKKEAIEIFRDRSILFMGLALPLLMLFIYGYGVSMDMEAVPAAVVL KERTPAALAFTRDLSANKQFAVRTVQGRPQAEALLEKRDIEFILEIPNGFERALTSGRGQ VQLTIYGVDSNSAVIFRNYAAGILAQTAAKMIQEGRISSSVQNTDLPAVTIVPRTWFNDE ANSRWYLVPGLLVIVSAVSASLMGSIVIAREWERGTLTSLFATPASSLEILLSKWTAYSF IAYCGFLLCLILAFLLFNEPLRGSLWVLLGTGFLFIGWAAALGLFVSAKTKSQFLATEAA VLASFMPTMMLSGFIFDLRSVPVWIEVVGRLLPPTYAVETFRICFLSGGQPVTLAVNALV IALWTAGLFAGALKVLGKSPLEAKHSPKKAAS >gi|319805509|gb|ADMF01000009.1| GENE 18 25973 - 27829 1516 618 aa, chain - ## HITS:1 COG:ECs0872 KEGG:ns NR:ns ## COG: ECs0872 COG1131 # Protein_GI_number: 15830126 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Escherichia coli O157:H7 # 9 582 11 556 583 398 42.0 1e-110 MTMASAPAIHLEGVVKTFPNPLDAARPIRAVDGISLKAGGAKASDRLIALVGPDGAGKST FMRLLCGLEAPDEGRLSVLGTTPDPDNEDFTTRIAFMPQTLGLYKTLSCRENLEVFAGLR GFEGEADGAAGLKHRIAELLSMTGLAGFEDRQAGKLSGGMKQKLALASALLRIPDLLLLD EPTVGVDPLSRRELWSVVRRMLADTPMTCVFSTAYLEEAEAADRVLLFESGRIIADENPQ TFISRAKGRTYLLPLANRAEHDAQMLCRRLSEETAATRSDALFLDIVPRMGGAAATTLAP TLPVKDARVPTGFVPRQPSLEDAYALLTFPRAPKTANRLASPPSDVSDTSADDTAECPVV IRADGIARKFGNFVAVADTSFEVRRGEIFGLLGPNGAGKTTTFRMLCGLLVPSKGQIEVA GYDLRTAKAGARARIGYVAQKFSLYGKLSVEQNLRYFGRSYGFFGQALQDRIDASLEDFG LTDRRDTTAGSLSFGAKRDLSMACGLIHSPEILFLDEATSGADLASRRAFWRRINALAAA GTSVVVTTHFLEEAEYCDRFLIQDAGKVLALGTPREVKQRAAVLSAVSGQSLVVDRMSIE DAFIAIVEAGRRSQETPS >gi|319805509|gb|ADMF01000009.1| GENE 19 27826 - 28863 1172 345 aa, chain - ## HITS:1 COG:ybhG KEGG:ns NR:ns ## COG: ybhG COG0845 # Protein_GI_number: 16128763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 26 330 24 329 332 183 37.0 5e-46 MSSAKKIVLLVGAAAAAAALYYGLNWWEAHRSVPPTMAWGTVDMRTVDLMFETSGRIASL AKEEGERVKKGEPLGELDLRALKIELERTAAQLEGLDADWKLALEGYRTEEIDAARAQAE AAESSAKLAQTTLARTQKLYRAHVASDQALDEARSNADNLTKVFAAAQADLARLTAGLRP EEIRAKKAARDAGEAALKALDYQIDVASRIESPVDGVIRSRLLEPGDMASASKRVYEIAV TSPKWVRAYVTETQLGFIKEGAPARITTDTTPAYEATVGYISPEAEFTPKTVQTQDLRTL LVYEIRLTLSDPENKLRLGQPVTVDFAPQAEAQSGFLDLSSKAAP >gi|319805509|gb|ADMF01000009.1| GENE 20 28975 - 29328 436 117 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEVSELDQIPEPRRRRFFKAGLYLFKALALLGGLVATACGFMLLYALWSSHSALSTGNML FVGAVGLFGLYIGFSTVRDLKTKEKSVEGWAFFALLTVAVAAAFLGILLRNVSYTVS >gi|319805509|gb|ADMF01000009.1| GENE 21 29340 - 32924 3697 1194 aa, chain - ## HITS:1 COG:RSc1642 KEGG:ns NR:ns ## COG: RSc1642 COG1197 # Protein_GI_number: 17546361 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Ralstonia solanacearum # 12 1128 23 1135 1157 1197 55.0 0 MTSLGPIFADDLARVKPGDRLRLTISAQTSDAAALAQAALEARARGERVLVVCADPADVP RLAQEMPWFEPKLDVRPLPDWETLPYDVLSPQEELVSERLEALYRLTAPTGGADVLLTSA VTASQRLSPVSYIGANTFFFHQGEQISLTTLQKRLAAAGYTNVKQVLAAGEFAVRGSIVD VFPMGSERPFRLDFFDDEIESIRWFDVDTQRSMESAEEIRLLPGHEFPVDPEALLAFRQR WRREFAGDPKKSIVYCDIEKEILPPGIEYYLPLFFDETAALTDYLPPNARVFLLGDIEAA LQAFGRDMASRYKVLAADPQRPALAPERIWLKPEEFFKSLANFARFTVEKKENAEDLKRL SGIEVDRKSQNPVGKLLERTRESAMKGVRTLIAAPSAGRMETMSQLLRTGGLSVEEFPDW QTFLDADSALGIAAAPLFSGAVFHHPEIVILSEAELYAASPRRHRLRRVKHATTLEMMVR DVAELKPGDAVVHADHGIGRYQGLVHMETPDGDAEFLEITYKNDAKLFVPITNLQLISRY AGADPEHAPLHQLGRGDWEKAKRKAAQEVRDTAAELLNLYAIRRTREGIRFKIDPADYQA FREGFAFDETPDQSTAINAVVDDMTSGKSMDRLVCGDVGFGKTEVALRAAFIAAMSGRQV AVLCPTTLLAEQHAATFRDRFRAWPVTVAELSRFRTGKESAKVLAGLADGTVDIVIGTHK LLSDKAQFKNLGLVVIDEEHRFGVRQKEVLRKIRAEVDVLTLTATPIPRTLSMSLEGIRD FSVIATAPERRLAVKTFVTSEQDGTIREAVLRELKRGGQVYYLHNEVNTIENARARLETL VPEARIAVAHGQMRERELEHVMRDFYQQRFNVLLCSTIIETGIDVPSANTIIIERADKFG LAQLHQLRGRVGRSHHQAYAYLLTPPDGAFTKDAQKRLDAIQALEDLGSGFYLAMHDLEI RGAGEVLGEHQSGEIAEVGYDLYNRMLMQAVKALKRGETPQAGDPLQLSTDINLHAPALL PSAYVPDVSQRLAFYKAFASAEDRAALEKSTEALVDCYGKLPDAARRLIEVHKLRLKCEA IGIRRIDAAPAAIIIAFTPKPNLDPLALVKLLQSRRDAQMLGPERLKLNVANPDPEKRLQ TVYDVLAKLALPSDPLPPAPAAPGTSSMSLRKPKGGKSAPAVSRSAKPPRRCPL >gi|319805509|gb|ADMF01000009.1| GENE 22 33111 - 34475 1669 454 aa, chain + ## HITS:1 COG:CAC1610 KEGG:ns NR:ns ## COG: CAC1610 COG1114 # Protein_GI_number: 15894888 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Clostridium acetobutylicum # 1 442 1 431 440 307 43.0 3e-83 MQALTLRQRSLVGLTLFAMFFGAGNLIFPPWLGVQAGTESLSAFIGFLITAVGFPILGVM AVAESGGLKNLGARVHPVFAFIFMFLIYLSIGPCLAIPRTASTSFEMVVRPLLAENGLLE APLLGWTALGFSQLAYSVLFFLAAFLVALNPEKLTSRLGKFLCPTLITLICVLWLGAFVN PIGEAGAPAAAYAGAALAHGFIDGYQTMDTLAALNFGLIIAMNIRAMGIKSEGAVVKETV FAGCIAAAVFFVVYGALTQIGAEAGGAFTGMENGAQTLTAVADKLFGTAGQVLLGLVFFI ACFNTCVGLIACCSDYFSGLFPKLGYRGWAVVFAAVSMVISNAGLTLILKFSIPVLVAIY PLAIVLIALGLINLVWKNLHLHRWVYPLSMLFTGVVSVTAGLEAFGLNVPFLSNLCADLP WSHIDLGWISPAIGGAAAGLFLSWKIPHACDPRT >gi|319805509|gb|ADMF01000009.1| GENE 23 34626 - 35474 577 282 aa, chain - ## HITS:1 COG:PA1229 KEGG:ns NR:ns ## COG: PA1229 COG2207 # Protein_GI_number: 15596426 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 36 262 34 258 268 143 36.0 3e-34 MNAFIEATKWPMGFEPDDTTSLLQCTIVNERTSVGTSVGQHVHKTGQFVVALSGLVGLAL GRNRVAFPPSSAAWVPPGCRHEGFLGEGAVSLYCHINPEWAAMLPTEPYRLLLSPMVIEM LKHFSTLPRRFPMHSHEARLAGVLFEELAAAPKLPISFVLFPDHPALKRIAESIIQSPQL DRPVASWAQETAMSERTLARLVLKETGLSFGAWRLKIAMLTATQKLLAGERAEEVAAYLG YAAPSAFSSAFRRVFGTSPSTFRNAELSLRKNSPPKHPITLD >gi|319805509|gb|ADMF01000009.1| GENE 24 35624 - 35983 312 119 aa, chain - ## HITS:1 COG:no KEGG:Glov_0887 NR:ns ## KEGG: Glov_0887 # Name: not_defined # Def: hypothetical protein # Organism: G.lovleyi # Pathway: not_defined # 2 113 17 120 136 81 40.0 7e-15 MQFNRFTAAVLTAGALVLLSINTASAADGQFLADRHVARGVACASCHGKETPKAGAKVST AQCNTCHQSLDAVAKQTSKLDPNPHYNHLVGLDCAECHRGHQQSVNMCAQCHNIEYKVP >gi|319805509|gb|ADMF01000009.1| GENE 25 36002 - 37489 1700 495 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 35 493 37 484 484 195 33.0 2e-49 MQRRELVRTGLFGVAAAAAGAAHAAQDAAPAKKRLSENWDVVVVGAGFAGMCAALEAAER GAKTVLLEKMNRPDGATVYSSGWIAAVGSRFQKNHPEDSPKAFFEDMMRLSHQRSDPELI KVYAEESGAGIDWLADHGTPFYLWEGLPAPELSRCLISPGEGITGGSKLIRCLMAALEKK GVAIHYNTKAVSLVKDECFNVEGVSCITPEGRKDYLARGGVILTTGGYGANEAMVDKYIG PWASRLIVRGSPWITGENILMAEEVQALLVNMDQFYAGPITPTGHCNPSPLMHAGYGIQV NTKGKRFVPETWLQVPKAKAIAERTEDNRSFMLIGADADKNAQILSNTIKRFARLGFEVI KADTIEEAAKKAGVPEKNLVETVREFNAAVKAGKAKELDPPYDYDEPHALETGPFYMIPA AGGMASTFGGPKINKDAQVVNFERRPIPGLYAAGAAAGGVWVYDDIGGNQLGGGMVFGRV AARHAAGRAASRKNA >gi|319805509|gb|ADMF01000009.1| GENE 26 37735 - 39189 1424 484 aa, chain - ## HITS:1 COG:SMc01971 KEGG:ns NR:ns ## COG: SMc01971 COG1012 # Protein_GI_number: 15966258 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Sinorhizobium meliloti # 15 478 8 471 477 374 45.0 1e-103 MASYDAFEPLFTSQFIGGEWTASSSPNRIAVENPATLEKFAEIPDGTVEDIDRAVDAAYE SLPAWRSTPIEKRRALMQRFLEHFKAMRQAIIDLEAAELGAPIAFGANAHCDYQFVRIQS YIDEVEKVVFEESFEHSTVIREPVGVVGCITPWNYPIGQIVQKVIPALLTGNTVVLKPNQ STPLTACLMMEAFRLADFPKGVVNLVSGRGSRAGAELALNPKVAMISFTGSTAVGVSLSQ QALKTVKRISLELGGKSPCVWLPDLPDYRPAVKPLFNSIFLNSGQTCTALSRLIVPKARL AEVEKLLQDHVKDYPVGDPFDPKVLIGPMASRQQFETVKSYIELGVKEGARLLAGSIPEE PGAHEKGWFIQPTIFTDVKNDMRIAREEIFGPVLCVIAYDTVDEAVAIANDTPYGLNAMV VGPKAEAQAVARRINAGNVYINDAPRDVTAPFGGYGASGIGREGGRYGLMEFTQLKAVFD HSTY >gi|319805509|gb|ADMF01000009.1| GENE 27 39363 - 40679 1412 438 aa, chain - ## HITS:1 COG:VC1042 KEGG:ns NR:ns ## COG: VC1042 COG2067 # Protein_GI_number: 15641055 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Vibrio cholerae # 10 438 11 432 432 162 29.0 1e-39 MNHTSFKIAAAALAVASALSSTAYAGGFQLTEQSALALGRAYAGVGVDGTDVSGMYYNAA TMTLHPGTQVQFGGVGIGMNLEYVDHQYSGEKNNGRDKEEFVPHGFISHQINDSTWVGLA ITVPYGLATDYGEDWNRKDHGYKAEMTVINFNPNVAWKATDTLSIGAGLALQYVDAKFGV GYKNQQMNMNMSSTYEATDFTWGFNVGLMWQPVDSLRLGLSYRSETKHSTNGDVTINGST GGLLDGTYDASVTVSGPAWAMATAAWDVNDYLSLYATFRWADWSSFDSLQTNSSALSTKV NAAIKHVGGLDSDQGKLLYGMYSKMTNIENGWKDTYLMSVGYDLRVNSFWTLRGGIAYET SPIDDKTKRTAIIPDADRWWFAIGSSFHWTKDFQTDIGFAHLHGVHERSLYDSQTKEEIG RYRHLDAYLLGVQMQYRF >gi|319805509|gb|ADMF01000009.1| GENE 28 41087 - 42298 1182 403 aa, chain + ## HITS:1 COG:alr3883 KEGG:ns NR:ns ## COG: alr3883 COG0245 # Protein_GI_number: 17231375 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Nostoc sp. PCC 7120 # 247 403 5 161 165 178 56.0 2e-44 MTDAPLVDFARIFALIPAAGVGRRMGAGCPKQYMPIGGVPMLVRTVEALLAASRVERVFV VVSPEDAYIDHAAESFAKWGDRVKILRAGGAERADSVLGGLRAACLPPESWVLVHDAARP CVRPSEVSHLIDEVTADSSAAGGILAVPMADTVKRADARRRIIETVPRSGLWRAATPQLF RAGELIGALNAGLDGITDEASAMERAGKTVKVVSCRATNIKVTEPGDERLAECLLEGQVG PMPIPEIRVGQGYDSHRLVAGRPLILGGVTIPFEKGLDGHSDADVLLHAVTDAVLGAASL GDIGTHFPPSDPKWKGADSGKLLAAVMDLAQAAGWQVVNLDATVICERPKLGALKEQIRA NVAKLLGVAPAQVSIKAKTNEKMDAVGREEGMMALATVLLAKA >gi|319805509|gb|ADMF01000009.1| GENE 29 42403 - 43269 696 288 aa, chain + ## HITS:1 COG:RSc1161 KEGG:ns NR:ns ## COG: RSc1161 COG0565 # Protein_GI_number: 17545880 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Ralstonia solanacearum # 8 258 23 274 287 168 42.0 1e-41 MQSVPELARRVCFILCEPAHPGNIGSAARAIKTMGFRDLRVVAPREADYRTHEEALAYAT SSADVLEASKSYATLAQALEGVTYAWAMTGYDREFGAPLTPMRQAASETASRLSALEGSI AFVFGTERSGLTNEEVCLCQGCAAIPADPASPSLNLSQAVQIAAYEMQLALLDARGDAGA LYDWQGRFAHEEPAPLEAVEGFFDHWERAMAACGAHDPKKPRHFMEVSRRLFGRAGLTKN ELDLLRGVCAAVICPKRDRIGTKTRGKAAMREQTQNDPKNSPMPPEER >gi|319805509|gb|ADMF01000009.1| GENE 30 43330 - 44214 789 294 aa, chain + ## HITS:1 COG:RSc1162 KEGG:ns NR:ns ## COG: RSc1162 COG1045 # Protein_GI_number: 17545881 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Ralstonia solanacearum # 1 257 21 263 268 247 53.0 1e-65 MFKEARELIATIREKDPAAHGAAEIIFAYPGFHAVMIHRFAHWCAIQGWTAFARWVSQVG RFLTGIEIHPKAKIGRRVFFDHAMGVVIGETAEVGDDCTIYQGVTLGGTNLTAGAKRHPT LENGVVVGAGAKVLGSFTVGAGAQIGSNAVVVKPVPAGATVVGVPGRIAVSKKTPAKAPE PCSQPERERGVHAAAAAFHAYGLEPGMRDPYATSILELVRVVEAQQCEIARLSEALASAT GKKVEPSPDAHFDTTKLWPSDRAPQQSKNETSPETPDAAKEPTKEQPKAPSDKV >gi|319805509|gb|ADMF01000009.1| GENE 31 44427 - 45899 1237 490 aa, chain + ## HITS:1 COG:ECs4383 KEGG:ns NR:ns ## COG: ECs4383 COG0635 # Protein_GI_number: 15833637 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Escherichia coli O157:H7 # 44 438 33 420 445 199 32.0 1e-50 MSEGTMHPLAQPVGRTHAAGAFDWRAVPSADPRASAFALDTAPALPAAAEEFSGEACREI VEDLLDRTRTGAAVAEVHAPFCESKCDGCGCWQHAYKELESRRWADALVREMAAWADTHA QAGAPIQALRFGGGTPSALEPVDILHVLAKARQYLPLSNDCSIELQARVHGFSEEKIEAA LAGGVTRFVLPVRSFSTEVRQAAGRLDAGEAAEKLLKRLTEYNESAVAVELNFGLPGQSL EVWTADLERACQLPLDGLMIRAAGEPDMLGEAAKTFRAADPALMARMHERAFEVLADNGW ERRTALAWSRSERDRTTFDVLAAGDADKFAFGCGAHGRLFGRELLIEPELGEWLSAVWMG RRPVSSVAEPKSGWRAAALLAQGALLGRFSLERIEHASGLRITESLEPLFDDWTAAGLLR RTGALGTWIRLTDAGLYWHQALAARMALRVDAAELLELPHRLLGGRRFEAAAQIIPADVW ESAERAAALS >gi|319805509|gb|ADMF01000009.1| GENE 32 46312 - 47907 1558 531 aa, chain + ## HITS:1 COG:YPO0286 KEGG:ns NR:ns ## COG: YPO0286 COG0635 # Protein_GI_number: 16120625 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Yersinia pestis # 38 441 30 427 437 328 41.0 1e-89 MNEALQTKGVEAYFADASDPLHKAFIAKAAVHSGPGGRPLIGEEAEKAIDSHYDTPRSGR SLAYIHVPFCETRCLYCMFYQNPWKEEATTEYAKQLVKELELWSDRAAQNAAPINALYFG GGTPTAFSPDDIRLVMGAVKKYLPLANDCEITLEGRIHNFSDAKMDAAIESGVNRFSLGV QTFNTQIRQSVMRVDDRDTIIRRLDKLCSYNNASVVCDMIYGFPGQTMEVWEDDLKTAAS LHLDGVDCYQLNVFEKSPLARYIANGKLPRAATSDEKADFFAKSVEYFTSQNWRRLSNNH WGRTIRERNIYNAWGKSACDCLAFGCGAGGRLAGYSYMMERKLADYYRLLGEGRKPVAFA MAPTHNWHLLRTISSEMESGAINLKAIGRQFGGLPLEDLAKVVLSQWCEAGLLVKRGDWY YQTVAGQYWHVTLAQLLMDFLSHQLPEPESEQKMDMGAPDSMMKMASAGHHAHGQMPPGI LKMLEGMPRDMIIEMAKKMPKEMITQMVAQAPKDVIERVLGEDGLRELGVR >gi|319805509|gb|ADMF01000009.1| GENE 33 47999 - 50113 1960 704 aa, chain + ## HITS:1 COG:Z3159 KEGG:ns NR:ns ## COG: Z3159 COG1629 # Protein_GI_number: 15802478 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 EDL933 # 15 684 30 698 719 290 31.0 5e-78 MKTYTHNLLSAAVVAAITFSGAAIADEYQTLETTTVTAGRFEQDLMETPMSVSVITADDI AKSGAQSIGALIESMTGVRINNDGGQGIKRAKIRGEDAFRSLVMIDGQKISEQKSMSGSP ILIDPAMVERIEVIKGPASVLYGSDAIGGAINIITKKGGTKPVQGEVGAGMNTSNSGKSV NASVYGGVEGWKYRIGVAHEDGDNLKTPVGDMNHTKFNSTGANLFVSYDINEKATVGATL DHFDLDFMSGSAEPGYEPFYVDVPEWKRTKLGVFGELHDLTESLKKVRFDVFYQKNDKTM NNHVEVINSPVVVDNYADNSLDQYGFSLQTNWSVSDSTFIVAGYEFNNDDLDAQSHVHTV GDTPAMPTMPSMHIDTEKQGFFKGAMTTHALFASAETNLVDTVTLSYGARYTYVKTDMDD IHGYKVYNPSNTTPQRPFNPDQELGKAGKQHDDRVVFNAGLVWHPVNDLALRANWAQGFR APLLQERYIATSMGSTSTTLGNPDLKPETSNNFEVGARWMSNSIMLDAAMFYSKAKNYIQ ALPISSSLSRYENVGEATTYGLELTGSYEIKSIGLEPYVNLTLMRRQFDYGNVETYKTAT PAVIARYGFRWNGEANGLGLHADAYARTISKTEYQDPSATARSDSSYRLGGATTFNLTGG VTFGDQKQYGLDAGFYNIFDKAYREQTAIYEPGRYLAVKLNAKF >gi|319805509|gb|ADMF01000009.1| GENE 34 50230 - 50784 666 184 aa, chain + ## HITS:1 COG:no KEGG:Hhal_0381 NR:ns ## KEGG: Hhal_0381 # Name: not_defined # Def: hypothetical protein # Organism: H.halophila # Pathway: not_defined # 10 183 24 197 199 108 42.0 1e-22 MTTTKPQWIKRRWEPRELVLIGVFAAAAKLSSLLIALAGGGMNPISLLGKNLVYTTLMIV LLTKVPKLWTLTLFTVVSMLVSVLLLGGSLTLLPAALTGALLGELFVVLSGGVHKPWAPW VAVGVYDFVSKMLSLGVSYLFLRETPALMTIIIPIVLLGYAGSVIGLWFGWKTVGELRHA GFVR >gi|319805509|gb|ADMF01000009.1| GENE 35 50765 - 51544 807 259 aa, chain + ## HITS:1 COG:no KEGG:Hhal_0380 NR:ns ## KEGG: Hhal_0380 # Name: not_defined # Def: cobalt transport protein # Organism: H.halophila # Pathway: ABC transporters [PATH:hha02010] # 13 244 17 248 254 132 34.0 1e-29 MRVLFVKDESSMLRGLDAKTKLSVMLVTAVLVVACSGVISQMVLFLFTLVYVLMLKRPKL VTLLYILMAVMMAVSAGFGWLISLWAPKLGGLSAQALFVPFLRGVSMMNVVMVLALTTRV EDLLGTLERLHLPFVVFLPAVVMLRFIPTFTNDIRQVWETLRIRGWPMGPVMITTHPILS ARLLFTPILFRALKSSETLGIAAELKGIGTAHRTVLPKAPPLSQLDRNIFIAMGVCIVLA LLAEIFLRELFMTPGAVMP >gi|319805509|gb|ADMF01000009.1| GENE 36 51553 - 53055 224 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 278 479 135 326 398 90 34 3e-17 MHAIELKKVSYRYSGAEPDSPDAVRCLDLTVDAGELKLVTGASGCGKTTVMRLVNGLCPQ IYGGTLSGEVLVDGNPTQDTPVAVLSEHIGTLFQDPEEQFFALNVGDEISFALKSRGVPF EEIGPRVDRAAKRMGIEHLLAQDIHELSEGQKQKVGLASILALGPKALILDEPSANLDPE ATVSLAGILGELKAEGAAILVVDHRLYWLKGLVDEVLVMQAGAVAVRGPFSILDDANVRR LYGLRQAEVEDLRPTLPRIPTALGDGTVPAGFFAAEHVSFTYKGAQKPIFSNVSFSVPAG ITALIGANGTGKTTLARILTGLNEAQGVFSIEGRPVDRDGLMPHSGLVLQNADHQLQMRT VREEVEASMIAAKSAAKKHAAFWQRLKTPKLTAEEEAWVTELLTTLRLAPLAERHPQSLS GGEKQRVVIACALAKNPQILILDEPTSGLDGANMASISKLLKAEAARGRAVFLITHDLEL LQACGTALDMKDLQPAEAAQ >gi|319805509|gb|ADMF01000009.1| GENE 37 53110 - 53646 785 178 aa, chain + ## HITS:1 COG:VCA0908 KEGG:ns NR:ns ## COG: VCA0908 COG3721 # Protein_GI_number: 15601662 # Func_class: P Inorganic ion transport and metabolism # Function: Putative heme iron utilization protein # Organism: Vibrio cholerae # 30 175 47 190 193 93 34.0 2e-19 MTNCCCKKPTAEQAKIIEEMLAAPYPVTVSSIAGRLGVTDLEAAELLPEANCTFVKGDIT ERFTEIWAELASWEKITLFIQHEGSIFEIQGQLHEGKIAQGYYNILAKSATIGGHMKYDA FSAVAFTTFPFMGRESLAVQFFTKEGKTAFSVFVGRENHQLVESVKEKFIAARAKFSV >gi|319805509|gb|ADMF01000009.1| GENE 38 53940 - 54464 705 174 aa, chain + ## HITS:1 COG:FN0772 KEGG:ns NR:ns ## COG: FN0772 COG0716 # Protein_GI_number: 19704107 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 7 170 2 167 169 67 28.0 2e-11 MTAAAAKPLVVISSRTGNTMILGHAICDAMPGAVLVKPEALPEDLSGFNPILLGFWCDRG MAPEDIQAAAKKLEGKTIGCFATMGGNAETPEALDWMKRTSESLAAAGKNNTLAGTYLCR GRIDPALFERMTAMMGGKVTPEREARRLASETHPDRMDLERGVERFRTIFGVNW >gi|319805509|gb|ADMF01000009.1| GENE 39 54464 - 55378 558 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 2 297 6 305 312 219 40 5e-56 MASAQPAVRIDSLEKRYASGTLALKGVSFDVDEGEFFGLLGPNGAGKTTLISCLGGLTTP TGGRILVRGMDTRTDRRAASLFLGIVPQEITFDPFLTVRETLRFQSGYWGILRNDDWIDE ILANLGLTDKADASMRALSGGMKRRVLVAQALVHKPPVIVLDEPTAGVDVELREHLWDFI GRLHREGRTVILTTHYLEEAQALCSRIAIMKKGEVAALDRTEALLSRFEGRVLRCRLVKG DLPPEAARDLMRRHGNDVTLRIEDADDALRKLESLKAAGAEIENLTVGQPDLEDVFLAVT GGEA >gi|319805509|gb|ADMF01000009.1| GENE 40 55378 - 56136 882 252 aa, chain + ## HITS:1 COG:RSc2955 KEGG:ns NR:ns ## COG: RSc2955 COG0842 # Protein_GI_number: 17547674 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Ralstonia solanacearum # 2 251 12 261 262 225 50.0 7e-59 MWVPFWTLFKKEVIRFLKVWMHTVLAPVLTGGLYLFVFGEALSKHLPVYEGVSYTAFIIP GLIMMTVLQNAFSNTASSLIQSKISGNLVFILLPAIPGPQVAAAYIGASFVRSALAGAGL YLLCSWWASPPVREPGLLIAFGFFGAAIMAALGLITALWAEKYDQMGAVMNFVIMPLTFL SGVFYSVDSLPPFWQAASRLNPFYYLVDGFRQGFFGSGDTNTTLSLLIVAATALAVTAAA VVLLVKGWKIRT >gi|319805509|gb|ADMF01000009.1| GENE 41 56146 - 57423 990 425 aa, chain - ## HITS:1 COG:no KEGG:PC1_0985 NR:ns ## KEGG: PC1_0985 # Name: not_defined # Def: putative lipoprotein # Organism: P.carotovorum # Pathway: not_defined # 29 422 23 395 397 293 41.0 1e-77 MKHSHISHSQPQGGLSRRRLLYAAAAGSALLSAGALTACASKPNVPEPLVQPLGQTTFAA YAADTRAWIESRRRWATDDHALELEANCPAETRPPAGTPILGGILCIHGLGDSPWSFVDQ AKNLSAAGWLVRTVLLPGCGTMPEDMAAPTADDWRRVVNEQAAVLRRDLNQLGPGTDGKP RPMWLGGFSTGCNLALEAALTGRAEADGLLLFSPAFVVRTHLTFLAPLLKPFITWLREPQ ESLMGGQTAFRYTMVPVPGLAAFVDTMRGVDDALKMKPFDKPAVVMLSEHDSILDAQSLI EWIPQRFTSAQSRFIWYGSRESLGKAAKDPRIIVHPDEIPSERIWSFSHMAMSFSPDNPE YGRHGRSHICTPEGEKPSYAACRRGEVDYGAWGDKRRGRIRARLTFNPYFDEQQRVIQSV MERSA >gi|319805509|gb|ADMF01000009.1| GENE 42 57661 - 59457 2324 598 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 88 598 1 484 484 151 27.0 5e-36 MKKTLLTLSIAAVFAVGASAAEFKAGTYTAKAPGIHGDVTVTVTFTKDKIADVKVTHSET PGIGSKAAELLPGRIVERQSPQVDGVTGATITSTAIRTAVADTVKQAGADPAALVPLAVK KQAKNETVDTDVVVVGGGGAGMSATIRTRMNGLNVVLVEKMPFIGGAASISGGQVVAQGS KLQKAFGVTDDSVESMVKDFQANGHNLNDLSKLTLYAKNVGPTIDWLHDQVGVKFIPNDL PFLAEYSHRRALEFQGGAGTMAQHLREVIGSNGAKVLFNTRVEKLIVEDGKVTGVEAVDG NTGTKYTIRAKKTLLTTGGYGNNKNLLTDTYKNTLYYGPVSSTGDGLQMAQKLGVKTQLL EYGKRYPNGIEVAPGKAKSTIYANVGAFDQAGILVSRDGLRFVNEKASNRHILDPMLQQK GGMAYVFMDQKSWEGFYKRLPETGVSHEDADKYLAANGKSAPIFVKGATLEEAAKLAGIN AENLKATVAKYNSFVKAQKDADFGRPVQYMKAEIAAEGPYYIVEQKPRFATTMGGVCTDD HLNLIQSNGKVIPNLYGAGELVGGVMGDDSPAGANVGWALTSGRVAADAIAEAIKAGK >gi|319805509|gb|ADMF01000009.1| GENE 43 59559 - 60479 960 306 aa, chain - ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 53 301 4 250 252 159 38.0 6e-39 MQRRHLLSSAFAAAVSAAGVTQASTIDQFEGKTRPIDTMNRVKGWQPGAVEPIEIKGRSI GTGRPKLIAPTTAKTPDDLVATVKQFAAMKALDMIEVRIDYLGRLAPKQYADVTRRAYEA AGDKIVLVTLRNGTDGGPFIAEDDYYGEVYEAVLTEGRADIVDIELFRDAAMVRRLVDTA HKKGVKVIISDHEFKFTPDEGELIRRLLLEQEAGADILKLAVMAASPEDALTVMNATAKV RHYYSNRPMLTMAMGKWGVLTRITGEGFGSDLTFASVGGKASAPGQIPAEDCLNVLEVLH KAMNPQ >gi|319805509|gb|ADMF01000009.1| GENE 44 60560 - 62551 1232 663 aa, chain + ## HITS:1 COG:PM0724 KEGG:ns NR:ns ## COG: PM0724 COG0642 # Protein_GI_number: 15602589 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pasteurella multocida # 138 655 79 561 571 134 26.0 8e-31 MCRRSLLQCLYWAYPRSGEGLTFLFFAGLMASISLRLLIPFVCSLVSLFGAEPAVGRPPE GETPAAVSSASLAIDPQAQQFRPVITIAELDTLVNPYDAFMLRQTAAALQRALPKYFVRT VTIADAEAKTQIERLRPDFLFAPASFSGMTGVEAARIATRRTNLAQSAERSVGAVFAVRA DSRFQSLADLRGRRVFAGLPTAIDGWLAAARELRQQGFEPDHFFGFVGYRNNAYPDVLSA LLNGSTDAAILPACLLEAVRMHGLVRAEDIRVINAKTGDLACAHSTALYPDLSLWSLSSA PETAVRDMTVALLGLRDASGYEWLTNVSHADVDGLLKDLEIGPYAYLKDMSPRALIERHF GKVLAAAGFLLLLVLNELRLHALVRRRTRELAKAMNERERLAEEASAARLELAGFERRSI VQQMSSMIAHEINAPVGALRTWAAVIRMKCPQRVFRDDETSAHAGLEQALGRIDYEANRI ADIVSSVRAYAKKEDEPLAACDLMPIIERAISAFRAEERSAERTKVVFSSAVREAWTTGR PLELEILFLNLVRNGASAMKSMKDSLDEPAEVRLTLDKPQEAANRWRIRVENPGIMLDAG SLERLNRKAASVSADPSTFGGLGLGLSICRGIADRHGASILFEARPTGGAAAVVMIDARD LPL >gi|319805509|gb|ADMF01000009.1| GENE 45 62565 - 63203 611 212 aa, chain + ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 192 13 198 218 137 38.0 2e-32 MKCILPTPLVRLVDDDNDFRESQKAFLTALGWQVEDWESPAAFLQDDDLQRPGCAVLDIR MPGMTGLDLQRRFVEAGSRLPVIFLTGHGDVATAVHTMKYGALDFLEKRGDPMVLAAAVE RACKKSLAAAKAAAEAQSYQAAYDALTPREREVFVLAAKGLSNKEAAEVLGIGAETVKMH KANAYAKLGVQSSLEAYQWLENLPTPQPKDVP >gi|319805509|gb|ADMF01000009.1| GENE 46 63200 - 64654 1090 484 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 20 480 23 479 484 147 27.0 7e-35 MTTRRTLLTAGAVASALPSSLLAAALEDSSDALEPWQQVIVIGSGLAGLTAGASALESGA RRVLILEKGPLVGGHSLYSSGSIAAVAPERAGAFSNGWRDSVEQFVADALAVGGGSGDPE RLVQIARGSAAMLDWLEGLGVSFGRPFEARSGLHPRSWAMPGNSAGRSYVLAVMDCYRRL GGKTILSAKVETLERQESSWKVGVTIRSENEVRLKYFQAPAVIIASGGFTANVDRRMKIM LQLTADIHTSADPYGTAWDGAQGDGLDLAQRAGGVIAEGFGLQLLPFWGGRLIDYAGGDM YVDETGRRFVDENLPWNAISEHILKLKSRRCWVITDAQSYKGATLSLKLINGIVRKAGSI REMAAAMRIPPTVLEQTFAQYNRAADAGLDPLTGKKVFTQRIEKPPFYFGEEQIYVHTTL DGILTDAQAQVRAQTGGVIPGLFAAGEVVGGIFGFDRLGGAGITNCLVMGRIAGQRAVEF QSGT >gi|319805509|gb|ADMF01000009.1| GENE 47 64925 - 67171 2927 748 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 1 748 1 743 743 1007 63.0 0 MTNAWRGFRGDHWRDDVNVRDFVQQNYTPYDGDESFLAEPTDATRKLWGRLAELQKEERA RGGVLDCETEIVSSITAYPAAYLDPEHKEYEKVVGMQTDKPLKRAFMPYGGIRMAQEAAS TYGFHVNDKYTKIFNEYHKTHNQGVFDAYTDEMRVARRNHIITGLPDTYGRGRIVGDYRR VALYGIDALVAGKKKDLANCGCGIMTDDVIRQREELSDQIRALGQMKVMAESYGFDISGP AKNAREAVQWLYFGYLAAIRTQNGAAMSVGRISTFLDIYIQRDLAEGTLTETEAQELIDH LVMKFRMVKFARIPAYNQLFSGDPVWATLEMAGLGMDGRSMVTKSDFRFLHTLENMGPAP EPNLTVLYSKNLPKAFRKYSAKVSINTSSVQYENDDVMRPIWGDDYSICCCVSATETGKE MQFFGARANLAKCMLYAINGGVDEKTGTQVAPAFRPITSEYLDYDEVMLRFKPMMNWLAG IYVNTLNLIHYMHDKYFYEAAEMALIDTDVRRTFATGIAGFSHVVDSLCAIKYARVKAIR NEAGVVVDYETEGDFPRYGNDDDRADKLAVWLLKEFLTCIRRYPTYRHSEATTSILTITS NVVYGKATGSLPDGRKAGAPLAPGANPSYGAEQSGLLASLNSVAKLPYEYALDGISNTQT ISPDALGHSLDERADNLVNVMDGYFAQGAHHLNVNVFGTEKLIDAMEHPEKPEYANFTIR VSGYAVKFIDLTREQQLDVISRTCHKRM >gi|319805509|gb|ADMF01000009.1| GENE 48 67220 - 67954 735 244 aa, chain - ## HITS:1 COG:SP1976 KEGG:ns NR:ns ## COG: SP1976 COG1180 # Protein_GI_number: 15901799 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pneumoniae TIGR4 # 4 239 13 250 264 301 57.0 5e-82 MPLGRIHSYETFGSVDGPGVRFVVFMQGCRMRCVYCHNPDTWRIHAGEEKSAAEVLRMAL RYRPYWGKEGGITVSGGEPLLQIDFLIELFELAKTEGINTTLDTCGLPFTKDPAWLVKFE RLMKSTDLVMLDLKHIDPPTHKRLTGWKNDSILACAQWLSEHGKPMWIRHVLVPGWTDED AALVKLAAFVAELRTVKRVEVLPYHTFAIPKWDRLGIPNKIRDVLPPEPERVANAKRILH AFGD >gi|319805509|gb|ADMF01000009.1| GENE 49 68389 - 69123 277 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 234 1 230 311 111 31 2e-23 MTESIVSIQNLKKAFGDHVVLDGINLNVMPGEKVVVLGPSGSGKSTMLRCINALEIPTSG AIFFNGVEVTNPKTDLNHVREHLGMVFQRFNLWPHKTVIENVMLAQQLVLKKDPAAAKTR AVELLKNVGLFDKADAYPASLSGGQQQRVAIARALAMEPKVMLFDEPTSALDPELVGEVL AVMKRLAESGMTMIVVTHEIGFAKEVADRVVFMDGGHIIEEGAPSEILVAPKEERTKSFL ARVL >gi|319805509|gb|ADMF01000009.1| GENE 50 69129 - 69887 1095 252 aa, chain - ## HITS:1 COG:NMA1709 KEGG:ns NR:ns ## COG: NMA1709 COG0765 # Protein_GI_number: 15794602 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Neisseria meningitidis Z2491 # 4 242 3 242 248 202 49.0 3e-52 MFGFESSVIAEYWPLFVHGAWTTVQVTIICVCLGMCLGTLLGMGRLAQARYNPLKGFLHY CVRWPITVYVSFFRGTPLFVQIFLMYFAVLPVFIHPVDGLLISGQLARDIRSNYGAMLAG VCAITLNSGAYMCEIFRAGIQSLDKGQMEAARSLGMSYMQAMRTIILPQAFRRMLPALGN NAIAILKDSSLISAIGLAELAYAARTVAGASARYWEPYITISCVYWVMTLLLAWGIRRLE ARLGRGDNGIGS >gi|319805509|gb|ADMF01000009.1| GENE 51 70033 - 70809 1093 258 aa, chain - ## HITS:1 COG:NMA1811 KEGG:ns NR:ns ## COG: NMA1811 COG0834 # Protein_GI_number: 15794701 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Neisseria meningitidis Z2491 # 27 249 39 262 268 191 42.0 2e-48 MSLKTKVLTAAAFAALLASTAVQAVTYTVGTGATYRPFEYEAPNKEIVGFDIDLMKAIAK AQGFDVEFVNTTWSTIFPALNNGDRDIIMSGITITDKRKEAVDFSEPYFLAHQLILTSSN LQIKSLKDLEGKLIAVVNASAGDVAASNAFGKASTNIRRFDNTPLALEELANGGVDAMIG DVGVLQWYMKQNPDKKFNQCRDPEFQEQYFGIGVRKGNTQVLNDVNAGLKKVIESGAYNE VYRKWFGSDAPKLPAFTK >gi|319805509|gb|ADMF01000009.1| GENE 52 71026 - 71229 116 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRETRMLQNQVRCVHPGSTAPHEQALRPAFPQTSISIAPMTGPARSPKTVMTWFGKGAI DVLIPCC >gi|319805509|gb|ADMF01000009.1| GENE 53 71258 - 71509 191 83 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0151 NR:ns ## KEGG: Lebu_0151 # Name: not_defined # Def: addiction module antitoxin, RelB/DinJ family # Organism: L.buccalis # Pathway: not_defined # 4 82 6 85 86 71 40.0 8e-12 MVNIQVRVDKHLRDQAQQILSQMGMDMTTAVRLFLHQLTVDKGLPFRPTIDPFFNEANLR YLERAIAEAKAGKNIEQHQLLDV >gi|319805509|gb|ADMF01000009.1| GENE 54 72015 - 72725 634 236 aa, chain + ## HITS:1 COG:SMa1349 KEGG:ns NR:ns ## COG: SMa1349 COG2186 # Protein_GI_number: 16263190 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 1 155 1 157 230 58 29.0 7e-09 MDEESLFRDIHNHLIHQAQEGGKMDTEMKLAERFNVSRYRVRRVLDILTRMGIIHRAQKR GLTVLDPEPEKLSKNIGSQLTVSGFNAMEDLEARMLIEHAVLELAVKRLTPMTAGRLTEK VGQLERVMISGAAVIEIHQSFRLELISGCGNRVLQVFAESLLTECLRLLRETGESLPSDY LSDLITGDRRLLDAIKVGNMDEACEALNTVIQLEVAGAADDLRRGEAAAGSMDKKA >gi|319805509|gb|ADMF01000009.1| GENE 55 72804 - 74225 1480 473 aa, chain - ## HITS:1 COG:SMb21098 KEGG:ns NR:ns ## COG: SMb21098 COG2079 # Protein_GI_number: 16264425 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Sinorhizobium meliloti # 17 270 13 262 265 191 44.0 2e-48 MSQEKLIPADQTKCAELARFVVRTTFEDLPEAIAQKAVRHILDSIGAGTAGAIAPETTIL TQTLHAAGEGSGAAPLWGRGEKMTPLNAALVNGTASHAFELDDTGGCDHSGAVVVPAAVA ALELAGRPVSGKEFITAVVLGYDIARRALEACGAYEPHNGAGFHSTGTCGPFGAAAAAAK ILGLNALQTRHALGIASAYSGGLWACVHDGAQNKRLHAGHAAQGGLMSALLARQGFTGPA QAFEEVWGGFNHSYAPTSSDPDAWLRDLGKNWKLARVSIKPHASCRSTHSSIDAVDNLMA KYGFKADEIAEILIIINPFVYGMCGGTAIHPMNAAQLSIPYSVAADLVFGSASLASFTRE KREDPRIAETMAKIRFDVDKRQKDDDEPIVQVTLKDGRAFETRVPMPLGSPVNPVTDEAL LKKFRSVVGMVLSPADVDALAERLLGLIEVTDVRAEVAEILGRTPAHREVFRA >gi|319805509|gb|ADMF01000009.1| GENE 56 74457 - 75866 1600 469 aa, chain + ## HITS:1 COG:BH3186 KEGG:ns NR:ns ## COG: BH3186 COG0165 # Protein_GI_number: 15615748 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus halodurans # 6 461 2 457 458 462 48.0 1e-130 MSSQESKSRSGRFDLPANELVEKFNATIPFEQRVCPFDIKDSQTHAAMLARQGIISEADA QAICRGLDQVAEEIRSGKFVFTVKDEDIHMAIEKRMTEIVGPAGGRLHTGRSRNDQTTTS TKMYLRHVIREVQEAIRGLQAECVAVARANADVIMPGFTHMQTGQPILFAHWMMAFFWML ERDFTRFGDLYKRMGRCPLGSAALAGTDFPIDRDFTAKALGFDGPTENSIDSVSDRDHMV EFNAAAAMCYMHLSRLCEELVTFSSQEFKFIELSDDFCTGSSIMPQKKNPDIAEKIRGKT GRMYGNLMAMLTIMKGIPLAYNTDLSEDKEQVFDSIDTLLDSLAIVTPMIAKMKVNAERT RRAADMGYANATDLADYLAKKGIPFREAHHIVGSMVNYAIKHNKRLDDFTMDEYRQFSDK IEEDIREEISLETCVKARRSFGGTAPERVREQLEHADKVLSEEAKALQA >gi|319805509|gb|ADMF01000009.1| GENE 57 76039 - 77382 1606 447 aa, chain + ## HITS:1 COG:VCA0205 KEGG:ns NR:ns ## COG: VCA0205 COG2704 # Protein_GI_number: 15600974 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Vibrio cholerae # 7 443 2 436 442 281 35.0 2e-75 METDLNFWLQLFTVAFCIGLGGRYGGVGLGAAGGLGVCILVLFFGLKPSSPPVSTILIIV AVIACTSILQGAGGLDWMVKIAERMLRRWPKAITFVAPFVCSFFVIFVGTAYVAFAVYPV VAEVATQARVRPERPIAASVISAGIAVVASPMSAATAALVASLSPYNVSLLDILMISVPA FIIATAATCLSVYWRGTELEDDPEFKRRVAEGDFEDLVLSRTDDKNAKSSGLNKVRLSVA IFAMGVAVVLLLGFFKGLLPTWTTPDGRTSTLPIPSLIQMVMLACGLFIIVACKIPPHKF ADGSVFRAGLIGVVGVFGISWLTGTFFDGYHDQFVSLFKTMAESTPLLFGLVLFFFSAVI LSPSATVVALMPLGAAIGIPPLLLVALYPATCGDFLIPGGAQIGCCSFDRTGTTHLGSWV LNHSYLLPGCVHVFTGVAAGYAIYCML >gi|319805509|gb|ADMF01000009.1| GENE 58 77526 - 78863 1484 445 aa, chain + ## HITS:1 COG:STM3599 KEGG:ns NR:ns ## COG: STM3599 COG2704 # Protein_GI_number: 16766885 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Salmonella typhimurium LT2 # 8 445 3 438 439 280 41.0 3e-75 MEMDLSIWLQLAVVLVCVAVGGRLGGVGLGAAGGLGVCILVLGMGIQPGSPPTSVLLIIT AVIACTSVLQGSGGLDLLVRWAEKLLRKWPRAITFVGPFVCSFFVMLVGTAYVAFAVYPV VAEVAASAKVRPERAVSASVICAGIGVMASPMSAAMAAMVDIMATQGVAFWQILAVTVPT FLLTICVTALSVFWRGAELEDDPEFKRRLANGDYQWLAGVTEGEKKFEEKPFARRAVAIF LIGILVSICVGSIPGLRPAWEAAGKVSQLPIPSLIQMVMLATAFFIIMLCRVPPEKFASG SVFRSGLIGVVGVFGIAWCTGTFFDLHTKLLADVFSGIAQSAPFVFCVAAFLASSVIFSP TVSTTIMMPLGLKFGLPPEFLIGTWACCYGDFLIPGGAQIGCTAFDRTGTTRLGTLVINH SYLRPGVVFVVSGTLIGWCISKLVF >gi|319805509|gb|ADMF01000009.1| GENE 59 78969 - 81560 2099 863 aa, chain - ## HITS:1 COG:RSc1402 KEGG:ns NR:ns ## COG: RSc1402 COG2844 # Protein_GI_number: 17546121 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Ralstonia solanacearum # 17 858 17 859 861 663 42.0 0 MPYELPSDAVAGVVRTFQAARERLAQAWREHRSTDDYLRSHSALLDAAVKSLAELAELPT DRLAIEAVGGFGRRELFPYSDIDLLVLLEDEAGEDPILAEHLTAFLSALWELGLTVGAAV RTRTEFTVEAGKDVSIATTYLESRLLLGSARLYYDAKDDFFAALDARAFFRDKMLELKRR HQKFDDTPYALEPNLKESPGGLRDLQVFLWCARAAGLADSVEAMHRADLITEREMHTIRQ CYEFLKTIRIELHLLAKRDEDRLLFDVQEELASRLGYRATGLMRASEALMKRYYWHAKSV VQMSIIQLQTISDRLFGGSSRATPLRLESAFLARGDEMDIVAENIYETDPNAILRTFLVF ATHPELTRFSTRLLRALWHAAPEIGPAYRDNLRNQATFLEILKLEKGADDALVMMNAWAI LGRMLPAWRHVVGQMQHDLYHIYTVDQHSLLVVKNLCRLRRSEHAHEYPLCTQLMTALPN SWRLIVAGLFHDIGKGLGGGHEVIGAEKSDAFCKRFGLSEPDREFIHFLVLKHLVMSRVA QKEDISDPSVVERFVELVGTKERLDALYLLTTADIRATSPKVWTPWKAGLLETLYKSAVE RLNGSEAEKSVTSIIDDRRARAAALVHGVTDATREKFWKELNLVYFMRHSAEEIAWHAEM LAERADSPDPVVRVKRGTAEGSLIVLLYLPDTKGLFLRAVAFLGKSGLSVVDARIHTTSH GWALDTFVANDAFAKFASTDSLRKLERDFAAALTNGKPLPPAPKCRLSRRSRHFPTRPSV QIQPDESGRAFILNIVATDRLGLLYAISKVLAKYDVNLQTAKLATLGERAEDVFLIDGEA LHDDATLLQLEAELIEALLPKSN >gi|319805509|gb|ADMF01000009.1| GENE 60 81687 - 82514 1026 275 aa, chain - ## HITS:1 COG:ECs0170 KEGG:ns NR:ns ## COG: ECs0170 COG0024 # Protein_GI_number: 15829424 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Escherichia coli O157:H7 # 1 262 1 257 264 314 56.0 1e-85 MSISIKTPEDIAGLRIAGRLAAELLDYLTPFVKPGVSTGELDRLAYDYTVNVQGCIPACL GYCPPGMTPYPATTCISINHVVCHGIPSDKKILKAGDIVNIDVTSIKNGYHGDTSRMFVI GKPTIAGKRLVDLAFGTMWAGIDAVRPGGCFNDIGRACQAYADANGISVVRDYGGHGIGK GFHEEPHVNHFPVNRPTPKFEPGMVFTVEPMVNAGRYGVTMLNDGWTVVTKDHSLSAQWE HMVLVTETGYDVLTVSKGTLPPPAFVKGWHLPENL >gi|319805509|gb|ADMF01000009.1| GENE 61 82880 - 83293 602 137 aa, chain + ## HITS:1 COG:YPO3027 KEGG:ns NR:ns ## COG: YPO3027 COG3111 # Protein_GI_number: 16123204 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 10 132 4 132 137 72 38.0 2e-13 MNIRTALFALSLAAALPLAAQAASGAAPQGFDAPAAAQTSQDKAPQGFGPTTPTTVENVI KNGADDEYVILRGRFTSHIKSDKYEFQDEAGGVITAELDHDRNWSMVHRGKLMEIRAKVD RDWNSTKLDVKSAKPLE >gi|319805509|gb|ADMF01000009.1| GENE 62 83540 - 84307 857 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187478228|ref|YP_786252.1| 30S ribosomal protein S2 [Bordetella avium 197N] # 1 243 1 244 249 334 67 1e-90 MVSMREMLEAGCHFGHQTRFWNPKMAQYIFGSRNKIHIINLEKTVVMFDEAVKFARQLAS QGGRILFVDTKRGGREIVAQEAQRAGCCWVDQRWLGGTLTNFKTVRGTIKRLKDMEEQLE DGTAAKLTKKEALDFQRHVEKLNKSIGGIKDLNGLPDALFIVDVGYHKIAVQEANKLGIP VIGVVDTNGSPDGIDYVIPGNDDSSKAVQIYAAGIADAVIAGRADSAVAAEGEKAADEEF VEVVEAAPAEAPAAE >gi|319805509|gb|ADMF01000009.1| GENE 63 84473 - 85360 556 295 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 286 1 276 283 218 44 8e-56 MAAISAAQVKELRLKTDAPMMECKKALTEADGDMAKAEEILRVKLGNKATKAASRVTAEG VVVVYVSDDKKLGAILEVNSETDFVAKNPEFLQMAREAVKLVAEKNPADVAALLELPLGE TTVEGVRKALVGKIGENMTFRRFARVEAQGFIEQYVHGSRIGVLVDMVGGNEELAHDIAM HIAATKPKAIDETGIDHALIDSERRIAIEKAREAGKPEAMLERIAEGSVKKFLKEVTLVN QPFVKDDKKSVADLLKAADAKIASYVLYVVGEGIEKRVDDFAAEVAAQQAAAAKA >gi|319805509|gb|ADMF01000009.1| GENE 64 85769 - 86494 1177 241 aa, chain + ## HITS:1 COG:RSc1406 KEGG:ns NR:ns ## COG: RSc1406 COG0528 # Protein_GI_number: 17546125 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Ralstonia solanacearum # 7 240 2 235 236 329 70.0 2e-90 MDVQAKPCYKRILLKLSGEALMGEDSFGINRAVLQHMIEELRTALDLGVQVGIVVGGGNI FRGVALGATGMDRATGDYMGMLATVMNAMALQDCCRNNGIEARVQSALNIEQVAEPYIRG KALRHLRLGRVVIFAAGTGNPFMTTDTTAALRGAEVGADIVLKATKVDGIYTADPKKDPT ATMYDEITFDEALRSNLKVMDATAFALCREQGLPIKVFNINKKGALRRVLLGEKEGTLVH S >gi|319805509|gb|ADMF01000009.1| GENE 65 86707 - 87267 854 186 aa, chain + ## HITS:1 COG:RSc1407 KEGG:ns NR:ns ## COG: RSc1407 COG0233 # Protein_GI_number: 17546126 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Ralstonia solanacearum # 1 186 1 186 186 221 63.0 7e-58 MTAADVIQQTQHKMGVTVEKLRDDFTRIRTGRASTGLLDKIRVDYYGCPTPLNQVAQVGV GDAHTLTVQPWEKNMVKVCEKAIRDSDLGLNPATSGDTIRVPLPPLTEERRRELTKVVKG FGEEAKVAVRNLRRDANTQLERLEKDKEISEDDQRRYETEIQKLTDRFVAEIDKVIAEKD KEIMTV >gi|319805509|gb|ADMF01000009.1| GENE 66 87378 - 87569 101 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNASERMMRKTAEFVLMAAMPVLLNACTAASGTAPLLGADRDAHGCIDSAEYVWSALLQI CEK >gi|319805509|gb|ADMF01000009.1| GENE 67 87711 - 88421 726 236 aa, chain + ## HITS:1 COG:NMB0186 KEGG:ns NR:ns ## COG: NMB0186 COG0020 # Protein_GI_number: 15676113 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Neisseria meningitidis MC58 # 6 232 13 241 248 261 57.0 9e-70 MSKDISIPKHVAVIMDGNGRWAQSRCLPRVEGHRKGVEALERVVEAAAQRGVKTLTVFAF SSENWRRPAAEVTALMKLFALGLERWHKPLSEAGVRLRVIGDRTGFSSALNETIDAAEAA TAAGSKMTLVIAANYGGRWDMLQAAQAAAAEGELTMEGVEKRLCAAELGEVDLLVRTGGE RRISNFLLWQAAYAEFYFTDTLWPDFDGEAFDDALAWYVGRERRFGMTSEQLRKAG >gi|319805509|gb|ADMF01000009.1| GENE 68 88457 - 89230 668 257 aa, chain + ## HITS:1 COG:PA2770 KEGG:ns NR:ns ## COG: PA2770 COG0384 # Protein_GI_number: 15597966 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Pseudomonas aeruginosa # 1 255 3 257 259 222 46.0 7e-58 MKCYVVDAFADHLFEGNPAAVCVLDTWLSDELMQLIAVENNLSETAFAVKNAGSYGLRWF TPGGEIDLCGHATLATAYVLMRFYEPNAGEISFQTKSGGLNVKRSGDRFEMDFPAYVLSS VPVTEAMTAALGVRPLEAWMGRDLVCVLADERQVCDAAPNPELLLGRDGLLTHITARGSQ YDCVSRTFAPKLNVAEDPVCGSGHCHIVPLWADKLRKTDLIARQASKRGGTLYCRRVGDR FKLAGKAVLYSEANLFV >gi|319805509|gb|ADMF01000009.1| GENE 69 89447 - 90289 1132 280 aa, chain + ## HITS:1 COG:RSc1409 KEGG:ns NR:ns ## COG: RSc1409 COG0575 # Protein_GI_number: 17546128 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Ralstonia solanacearum # 139 261 136 258 271 97 46.0 2e-20 MLKLRVATAVVLLLILWFAIWAGPLAFAGVMAICFGLVLYEWLRIGNLGPVPAALIAAIE MISQFSLYWAQALPKMDWFLFIVNGGVMVAWGVIFFAELFHRYNGFKVNVLTCLTTAVIF VPSAYLSLLWLYEAGSWVLVLSVFLIVWGADICAYFCGRAWGKHKMCPAISPNKTWEGAI GAYVIVIIFFILTWWFCDQKNVFTNFVFEHAGFVWGLIVLAGLIALSIAGDLWESMLKRL AGIKDSSHMLPGHGGFFDRMDASLPVLPAATWIMLAILLF >gi|319805509|gb|ADMF01000009.1| GENE 70 90301 - 90939 548 212 aa, chain + ## HITS:1 COG:STM3985 KEGG:ns NR:ns ## COG: STM3985 COG1739 # Protein_GI_number: 16767255 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 20 209 15 204 204 138 39.0 7e-33 MTEGYLVPDLPSGGFFREEETVKRSRFIVTVGRAASPEAAHAFIEKIREEHSQATHNCWA FNAGEPGSTAQVGASDDGEPKGTAGRPMLTAVLHSGIGEVVVVVTRYFGGILLGTGGLVR AYQGSAQLGLEKVPTRAREVLIRCLVSMDTAHDGIFQNLLRAARGQIVTSDYRFDASYEI LVPEPEVEGLESGLARATAGEALFERLEEEAV >gi|319805509|gb|ADMF01000009.1| GENE 71 91087 - 92253 840 388 aa, chain + ## HITS:1 COG:HP1044 KEGG:ns NR:ns ## COG: HP1044 COG1408 # Protein_GI_number: 15645658 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Helicobacter pylori 26695 # 32 386 9 367 370 127 28.0 3e-29 MRFAVFHLIMALWVLWRFVLPLDLPRRFKAALALLVVVAASFSTVTVFFFGGLLSPEAPR WFLIAGNSGEAVLLFLCGLTAAREVLILFSVLAGRSGEKMHYVVQKDRRTALGIAAAAAG LAAAGVSEGVSAPEVRRHTAEIENLPPALEGFEFVQLSDLHASALLTEPWSRAVVERVNA LRPKLILITGDFVDGTVERRERDVAPFADLRAEYGVWGCEGNHEHYGDYEAWMRKIEALG IRVLRNAHTVLDVKNPEGKSAQLCLAGLCDPMAARFGREMPNLEKTFAGAPASREALRIL MAHQPKFFPKYCAQASFALQLSGHTHGGQIWGMDEAVAIINGGFVRGFYRRSGALMYVHP GTGLWNGFPIRLGAASEIALIRLTRKQP >gi|319805509|gb|ADMF01000009.1| GENE 72 92322 - 93497 963 391 aa, chain + ## HITS:1 COG:RSc1410 KEGG:ns NR:ns ## COG: RSc1410 COG0743 # Protein_GI_number: 17546129 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Ralstonia solanacearum # 1 387 1 389 393 340 51.0 4e-93 MQTISLLGATGSIGRSAVDVIRRHPERWRVKSVAGGSRIPELVEAVRATHAKQAAVADPA KLGALRAALDAADCHDVEALAGADAVEALAADPETDAVLQAIVGAAGVAPTFAAARTGKR LMLANKESVVCGGALLMKTVAECGAELFPVDSEHSAVFQCLAAADPNARSRSRIILTASG GPFRGRKTLEGITPAMAVKHPKWSMGRKISVDSATLMNKGLEVIEASWLFDFPEDRIDVV VHPESVIHSMVAFEDGAVMAELGDPDMRTPIAAALSWPQRVNSGVGALDLTRVGRLTFEA PDLETFPLLELARETLRRRDGSSIVMNAANEVAVAAFLDERISFTGIMKLVEMTTERFSA PAPQSVEEIFAIDVEARTRAAEILSASEFFN >gi|319805509|gb|ADMF01000009.1| GENE 73 93539 - 94891 1368 450 aa, chain + ## HITS:1 COG:HI0918 KEGG:ns NR:ns ## COG: HI0918 COG0750 # Protein_GI_number: 16272855 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Haemophilus influenzae # 3 448 1 443 443 195 30.0 2e-49 MTLSVLLSLVGFLLTIGIVVMIHEGGHYLAAKWLGFGVKRFSIGMGRVLWRRRAWDTEFA VSLLPIGGYVAFEEADELREQGREPTGVLFDSGPRWKKAIVVTAGPLMNFVLAVMLFTAS GAIGVRDIAPYVEPAPASQAQTQGVGAMDLVTAVDGRRIVGVMDFNSALLEHTGKTDVPV TFSRAKTGESYVRHFDLSGLSLDEAAKTNGFVLQKLGFLLAGRGVTILKVEADGPAAAAG LKSGDVVEKINGSRADMQGFAAAIRTSPEKTVQLSVNRAGTPVEISLVPKRILDEKTQSA VGRAELRFGPGIEFVTVRLTPLQSLETAFDKVVGLTRFQAAAVGGMAKGEVSTENLSGPV GIAGMAGSALTAGVSAFLEFVALISIAIGFMNLIPIPALDGGQLVILGIEGLMGRSLARG LKEKLGAVSMALLLLLAVYVTMNDIGRLGG >gi|319805509|gb|ADMF01000009.1| GENE 74 95086 - 97404 3226 772 aa, chain + ## HITS:1 COG:RSc1412 KEGG:ns NR:ns ## COG: RSc1412 COG4775 # Protein_GI_number: 17546131 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Ralstonia solanacearum # 8 772 6 765 765 748 49.0 0 MQLPTITRLTAALAAAFVLAGSASAFTISDIRVEGLTRTEPGTVFSHLPFRAGDEYTAEK GVRAIRSLYQSGLFRDVSLTQDGDVVVVHVMERPAVATIETHGIKAFDKEAVEKSLRDVG LAEGRIFDNATLTRADQELRRQYLARGYYGASVKTTVTPLERNRVRITVNVDEGSASSIA SIRITGNHLYDSDDLLDLMQLGTPNWFSWYTKRDLYSREKLAADLETIRSFYMNQGYLDF KIDSVQVSVAPDKSNVYITINLTEGEKYTIRSAKLQGDLLGLDDQLNALVTLKAGEIYNA QAVKDVSTALTDKLSTLGYAFASANANPISNAEDRTVDIVYTIDPGRRAYVRRVNITGNN RTHDEVIRREVRQYESAWFDSDKVKLSRDRIDRLGYFESVTAEPKPVPGTRDQVDLEVNV KERPTGSISLGAGYSTSEGIILSAGFAQNNVFGTGNSVSVDVNTSKSQRTYALSVTEPYV TPEGISRTYDLYDRKVDLEELDVADVKYETRGAGVSWGIPFTELDRVFLGTRVESTHVDA NPRSPRRYQNYVEKFGDNPVSVALTLGWSRDSRDNSLAPTRGVYQRLSGELGLPGLDIQY YKATYQYQHYIPLSRTWTLALNGEVGWGDVYGSTDQFPFFKNFYVGGIGSVRGYDSGTLG PKDYSANSDGDNLGGDRMITGNIEILAPLPGGDRTLRIFGFLDAGYAWGYEGDQHGNYTR QKIDFADLRYSTGFGIAWISPLGPLKFSIAFPLNDKEGDDTQRFQFQIGTGF >gi|319805509|gb|ADMF01000009.1| GENE 75 97937 - 99361 797 474 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 4 441 3 443 456 311 38 9e-84 MELLNTLVSAVNNVLWSYVLIVMLVGLGLWFSFRTGFVQIRHLREMVHLVAEGATAKTKK GHISTFQAFCVSTASRVGVGNIAGIAIAVVVGGPGAVFWMWVIALLGAATGFVESTLAQI YKVPRRGGGFVGGPAYYIGNALGSRWGAWLFAVLISVTYGLIFNSVQANTMALSLKASFD VDPAWTGLGIAVLTGLVIFGGLNRIARVVGWMVPLMAGAYLLLAAVVTVMNITLVPEVLL LIVKSAFGVDAVTGAAFGMALMTGIKRGLFSNEAGMGSVPNAAATADASHPVKQGLVQAL GVFVDTMFVCTASAMIVLLSPDWHGAQLTGIELTQHVLTGQLGAWTNTFMTVIVLFFAFS SIIGNYFYGEVNMDFISRRPIASWIFRGCVLVMVYFGSVASLNIVWNLADLFMALMAMLN LAAIALLGRYAFAAMKDYFKQRSEGVENPEFDPSVLPATRGIVCWPRKKDEEVN >gi|319805509|gb|ADMF01000009.1| GENE 76 99672 - 99824 66 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAHQTPVEGLRRQSIQMLWKETSYEHEAYVDGCCRRALFAGRMRFRSGR >gi|319805509|gb|ADMF01000009.1| GENE 77 99745 - 101379 2009 544 aa, chain + ## HITS:1 COG:HI1069 KEGG:ns NR:ns ## COG: HI1069 COG3303 # Protein_GI_number: 16273000 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit # Organism: Haemophilus influenzae # 146 530 122 471 538 125 28.0 3e-28 MNTKPMLTAVAAALFSLGACVSAQAADLSTCTTCHSNITKAHAGAAHKDIACTSCHSGVD QHLKKVTDRPTVNMDPATCGGCHQAQYKSLYKDDGRAARQSKKAPNGPAPDPFFDRALGA HGFTVEHDLPRAHVWMAIDQFIVDRAFGGRFEPKDGWLYATLDGGKSYKVWDVLKDNYPD NNVQKAHKPGTAAAANAVCWSCKSTDVMMDWAYLGDKVEGAQFSRSSNPVDVVRKVNHAI NCNFCHDPHTAQPRVVRDALIDAVTRDDKSVPNVYRDVAAHPTKLDVKDVGVRGFTRKVA YMDKADSNLMCAQCHVEYICNPGFDAKTGAKIGFDSRLTNHFPFVNADEIEQYYDKIGFR DFKHNLTGAALVKMQHPDTETYFGSTHDKAGATCATCHMPKVKDEKTGKMYTVHWATSPR HYMQETCLTCHKDKTAEQMNKAIDAMKGHYDGKVREAEARMNDMFNAFELAIASGVDEKT LDEARKLHSSAHINWEYWTAVNGAYFHNPEEAQRSLAKSAKAASDATALLRKAIAAKASA KAGK >gi|319805509|gb|ADMF01000009.1| GENE 78 101517 - 102434 1172 305 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSTWLLYVICALMLLAAIAAVLPTVLRTKNDVNGEALDREATALATKALQAEKAKLDAD RSLGRISEAEYESLLTDLRRRVIEEQKPAADPTGAPSSSANAKPSTRLSRVQLAVSVAVL ITVVAGGSYAFLGSPEMLELTNAQKVMEGNASAESIEAYLKTAPKDGRAWVLFAHKKIEA GDFRAAARALRTAREVEPKIARDRDVMLEYGAAVLTAQESDWYADANRVVKEAYGLMADD PRAERLAVMAAIAAEDWAWAVDVVRAMLPRIPPDSGEYMQARETLVMLEARAKAAADQKK TEVKP >gi|319805509|gb|ADMF01000009.1| GENE 79 102549 - 104219 2042 556 aa, chain - ## HITS:1 COG:STM3807 KEGG:ns NR:ns ## COG: STM3807 COG2985 # Protein_GI_number: 16767092 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Salmonella typhimurium LT2 # 25 554 18 551 553 355 41.0 1e-97 MESVLTSPTSIAHIVLVYALVISVGLALGRIKVFGVSLGVTFVLFVGLAAGHFGMAIEPH VLTFLRDFGLILFIFFIGLQVGPSFFSSFKSGGIILNGLAAGAVVLSILVTILLWALTAG LIDLPTMLGVHFGAVTNTPGLGATQEALAVMGWQGADIAVAYACAYPLGVVGIIVSAIII RIIFRVNLAEEDKAWEADEADKNEAPSSFYVEVVNDFLHGQTIQSIRQFINRPFVCARIQ SPGGPIRSPGPDTEVFKGDILRIVSESEHKAGIVAFFGKEALGVDLQIQHSPIHSETVLV TDPKVNGLKISDLHLSHYDGLNITRLFRAGMELFPYRSIHLQLGDRLRVVGPERAIMRFT AHVGNQSHKLDHPNIISIFVGIALGILAGILPIAIPGIPVPVKLGLAGGPLIVAILLGRY GPNLRLATYTTNSASLMLRELGIAFFLASVGLAAGDGFLQAFASGEGFAYMALGLCITML PLLVVGYVARRFFSLNYLSIVGMMAGTTTDPPALAYAATLSEKNSSAVAYSTVYPLAMFL RILTGQALLLIFWAEL >gi|319805509|gb|ADMF01000009.1| GENE 80 104400 - 105233 823 277 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQFEEETLEILEPNAAMSPILKALDAALAAHTGPDPQPPREFAWEEIPFAEVARTAAAFP LLFEGWAEGAIPATEYSAGDLLHELSSDLDIMSAEDLHERFLLLVEGSRASADFRRIMAA SSVKHLVRNEAGLGWSGFEVVPKNTELLERMRRKRMAADHFRGKLDWTALRGWDLALGAA LITKAQAADMLTNEEALDYFRRIAGELLLRMTSRQALARAMLLGTFWTTLEVGEQQAAEG LRQAEQALDSLLSPEGVWGRTPWVQQKADADPPTVYV >gi|319805509|gb|ADMF01000009.1| GENE 81 105311 - 107509 1704 732 aa, chain - ## HITS:1 COG:STM1604 KEGG:ns NR:ns ## COG: STM1604 COG0826 # Protein_GI_number: 16764948 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Salmonella typhimurium LT2 # 13 668 5 649 654 474 43.0 1e-133 MTLHAGIWTAPAPTALELLAPARDADAGIAAIDHGADAVYIGGPAFGARAAAGNSLDDIA RLTAYAHRFNARVFLALNTLFTNEELPLARKLAFELADAGADVLILQDMGLLEGPLPDIE LHASTQCDIRTPEKAAFLESVGFSQLVLARELSLPEIAAVRAKLQHARIEFFVHGALCVS YSGQCWMSQALTGRSANRGECSQLCRLPYDVYTEAGTELAKSKHVLSLKDNDQSANLEAL IDAGVSSFKIEGRLKGAAYVKNVTAFYRRKLDEIIARRPELSRTSQGDSVFTFEPAPEKV FNRGQTDYFVHGRQYDQPYELAELESPKHAGEPAAVAEEVLPGRIIVKSLPGVTFANGDG LTYLADDEEIRGIAVNRAEPVLNKAGKPIPHLWMLHTLERRRMDGLRPGLVLKRNRDHAF LRMMEGKTAERKIPIDLIFTTHEDGLDLVASDGVRCAAASVALDLQTPSDLVKNRANLRV QLSRLGDTPFAAANIFIPEDLDVFVPASVANQLRRAAADDLLALREAEREKPRRAPWDDA SPYPERILGFKANTANDQAAAFYAAHGARVTMPAFEIKPAPKADLMTCRHCVRASLKLCP KMLKAFPEILQTTDRALLRPEPLVLVNSAGERFKAYFHCKANPCEMTITPEGDFVRARAP RTMIKTAPPAEAAGRSADTHPDERRRSSEKRSASKRSLPEKRFTRDNQSSRRSGAFAKFD NKHRKSGRTRGR >gi|319805509|gb|ADMF01000009.1| GENE 82 107506 - 108285 729 259 aa, chain - ## HITS:1 COG:RSc1788 KEGG:ns NR:ns ## COG: RSc1788 COG0666 # Protein_GI_number: 17546507 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Ralstonia solanacearum # 63 239 36 212 291 86 31.0 5e-17 MALRQFAAALLCGSLLLASSASSLFTEPVHAASAAGSSGLGWDDIASKNEAENPLTSAQL EAIRQAVRSANTRTLKQLLQKGLSPNFRMENGDTGFTYAVRAENYDVAEALLKSGRLNVN DLNKFGETPLMLAVFKGQDELFDELIAAGADPQRGGNWTPLHYAATEGRTEFIERLLKAG ASVNIQTSSGVTPLIMAARKPSRAAVTMLLKAGAYRDYCTDTGQSPADFARRAGDKELAE YLAIPKCAVKGRIAQGAAK >gi|319805509|gb|ADMF01000009.1| GENE 83 108423 - 109364 640 313 aa, chain - ## HITS:1 COG:lin0450 KEGG:ns NR:ns ## COG: lin0450 COG0583 # Protein_GI_number: 16799526 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Listeria innocua # 1 286 1 281 291 167 33.0 2e-41 MNLRQLKAFQAVCRTGNITRASELIHLSQPALTRQIQELESYCGCKLFERTRHGIVLTDE GELLQVRAEEMLSLAERTRRELKEAGGFTGGIVRIGCVESSAAQELSQLLAKWQQSTPGV RKAEFELYSADGDDIRSSLDEERLDVGILLEPVETAKYDSLPLSSADRWGVVVRSDSPEA QLPALTQDELVKLPLILPRRHIVIDTLHQWFNGGPEPLKIAGYHNLLTNALTLVKAGLGN LLCVEGSWTIRETPGFVFIPVSPVRLARHRLVRKKNRLLSRTAESFWAYAADHWRSEESD TQLSPKISDSQNH >gi|319805509|gb|ADMF01000009.1| GENE 84 109507 - 110529 524 340 aa, chain - ## HITS:1 COG:TM1006 KEGG:ns NR:ns ## COG: TM1006 COG0667 # Protein_GI_number: 15643766 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Thermotoga maritima # 7 330 4 324 333 325 52.0 6e-89 MISEAFPKRILGSGTAAMTVSAIGFGAMGTTYHRGAAPEKKSLLSLFARAVELGCTFFDT AAVYGPFTNELLVGEALEPFRNHVQIATKFGHCIHADGSHQSGELDSSPAAIRRSCEASL KRLRSETIDLFYQHRFDPKVPIEEVAGVVADLIREGKVQHFGLCEVSPEIICRAHAVCPL TAVQNEYHLMWRIPEDTLFPTLNKLGIGLVPYSPLNRGMLGGEITHKTKFAAKNDNRAAL PRFLEPNLSGNLKLVDVLERFGRPRGLRASQTALAWLLAKAPSIVPIPGTTKQTHLEENL AAAQRSLSSLEVSELEAAAAEVPILGERYPTLEKSQVWAA >gi|319805509|gb|ADMF01000009.1| GENE 85 110526 - 111566 959 346 aa, chain - ## HITS:1 COG:MA0419 KEGG:ns NR:ns ## COG: MA0419 COG1073 # Protein_GI_number: 20089312 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Methanosarcina acetivorans str.C2A # 43 337 33 326 327 216 41.0 5e-56 MKKTHIASAALTAASALFFSANAATVAEGVNTVGSVSMQIAAHGETLAANFYVPEGCSEG NKCPAVVVSHPWGGVKEQTSGYYAQALSRKGFVIVAFDASHYGMSTGEPRDFESPESRVE DIRSAVSWLANRPEVDASRIGSLGICAGGGYALHEVQSDPRVKAVAAVSAYDIGAAARDG IDGAPMTLENRRALLENSAASFTNHAAGTPFERISLLPENAEDLAKADAFTQEAASYYLT SRGSHPNTKNRVVTASLALHQTYQPFSFLSTIAPRPVLLIAGEKAQTLRFSRSAFNAAAE PKELFVVPNAHHFDLYDKPEFTIPIIEKLTQFFSAALTANSGVQAK >gi|319805509|gb|ADMF01000009.1| GENE 86 111621 - 112286 485 221 aa, chain - ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 75 215 34 171 179 72 27.0 7e-13 MTASASRRRFLMRLGCISSAAAACSIPTVCAWAAGTHTPVVVSFSWFENVNPAELAKTRI DATTGASLLNHGLTTRAAAWIAEEFELAHIVLRTLSPYPADYDQCLDQAIEEKTNRTLPR LQPISDRNRRALGQAELIYLVFPNWSYTLPRSLASFFADNAIDGKTIAPLCVHGTGGLAR TIADMRRMLPHSRILNPLSLEREEVLAAQAEILRWARHSAS >gi|319805509|gb|ADMF01000009.1| GENE 87 112298 - 113059 230 253 aa, chain - ## HITS:1 COG:no KEGG:YpAngola_A2476 NR:ns ## KEGG: YpAngola_A2476 # Name: not_defined # Def: hypothetical protein # Organism: Y.pestis_Angola # Pathway: not_defined # 33 228 22 213 231 67 30.0 3e-10 MNFNRACPLAKLLQALRSTPFVPAAAVCGIVLLMHYWLAGEALHEWIGIVGIVAAGLHIH RFSWWFRTPHFVNVTPLMRMGSVIAIGLLLSTSTTFISGLLMSREALPFLRVSGMQSTLA LIHLSSSHWMLLFAALHCGYHGKRLMSTLWRKLSECIEALPSVKAAAAISLTAIVLGAVS ISPERGLLKVLFLRVEFLNMDAESSPILLFLKTFLLFAAAALAAAYTRHCLAPRRHRRVR RAAVPARTTSESL >gi|319805509|gb|ADMF01000009.1| GENE 88 113079 - 114119 697 346 aa, chain - ## HITS:1 COG:no KEGG:Bmur_2509 NR:ns ## KEGG: Bmur_2509 # Name: not_defined # Def: hypothetical protein # Organism: B.murdochii # Pathway: not_defined # 32 213 21 202 205 75 29.0 2e-12 MKKLVMLPLSALAGISMLFGPRAALSAEVPADDKTAVVYFSLAENARHSDTPDSITGASL AAGDRHVGTTAAMARTAAQSLNARLVPLLVKNPYPAAFDAVVSRGHQEESAPPELAAIPD LHGVETLLIGYPTWNMGPAAPVMTFLEQALNRDGVKQIYVFNSNDGWGPGRGRSVIASAF PAAQVNDSVLAVDSKHGIEGAARTAAWLNSLNIKQNTAVAADAHQVAVDADGRSIRVVLN DSPEAKQFQQMLERGPVTVRMSEYGSREFYGPTDETFTVTSEGQYQFEDGTLTFCPTNNT IAIFYAQSAHPTLSMAVYPLGRVTSDLSVFKELPGRTTFTFRQAAP >gi|319805509|gb|ADMF01000009.1| GENE 89 114311 - 115114 814 267 aa, chain - ## HITS:1 COG:SA0449 KEGG:ns NR:ns ## COG: SA0449 COG0084 # Protein_GI_number: 15926168 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Staphylococcus aureus N315 # 13 265 2 255 257 184 38.0 2e-46 MSFDCLATLMTPFIDSHCHLTDPAFAQDLDAVISRMKNASMTAAVTIGCEDRDIEPLRAL LDRFPGFLFGAWAVHPEYPDAREADADEIAERASEPGMVAVGETGLDFYWCKEPLDWQRD RFRRHIEAARRAQKPLIVHARDAEAAALEILKSEDAGEVGFVMHCFCGTLETARGVVNAG GHVSFTGNLTFKKNAQLRAIAAALPLEKLMIETDAPYMAPVPYRGKRCEPWHSMEVARAI ALAKNLDFDEVLAQTCRNTVQFFGLVN >gi|319805509|gb|ADMF01000009.1| GENE 90 115104 - 117524 2247 806 aa, chain - ## HITS:1 COG:VC1609 KEGG:ns NR:ns ## COG: VC1609 COG0842 # Protein_GI_number: 15641617 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Vibrio cholerae # 405 783 16 389 408 91 24.0 8e-18 MTAWFRHVAAAAQLEIQQVLTHPVEWLTAILAPLFWCVVLWFAFNAGTLSGLPVALVDLD QSAASRSVVDALDALPSIKLERFENSLSADRALKNSKVFAVVTIPQDFEIDRRRGAGAPV SIDLNKSWYAVGTLLEVDFKTALSTLAIGHAAVNATTQGGTFAENSRHLRITTPDVFFLG NPAFNFVAYLLPTFIPGVLALGALLAFISMLSREWRAGGIRRFMKLTQGSGSAVLAGKLL PWVIVFCTASSVWVAAFAGAAGWGVEGPIIFWLTASWLLILAMAGLAALVVSIAPTWVIA LSAGICLIAPTFPFTGFSFPLDSMTPGAQLFGSLLPLTHYLQAQAQIWVLGSPLSAIAQT QLTLAAFPIILFAAAGPLFARRMRRLKKTEQMSSNLTAALEKSLEAHPAASGQRTGFWKS FALTIRSAFLSRDTIAIFGGAVAFYLVFYGWPYSTQQIENVPVEIVDLDGSSASRRLIEA IDAAPAAALLSVSSDPGPAMETFRSKGQTVVVTIPHGYAEHLARGENTTLHILGSAAYPV KTRAIQAAVSAAAADAELKIDQASSQTPGIPPASLLASANTAPQMQFQYRFNEISGYGNY TVPAVGPIILQAVMLMGIGMSLGGWLWRHPRRKFVCDAVDRPWNEGLGIAFGLWMIAFGW FLYMEGFGFWFGQYGAMATPWGVVLTGACYAAAVVGFGFMIVTLIRSNCWTAPVTVVMSA PALFISGAVWPTANLHPAVAALAELIPSTHAIRASVAAAQDGALFADILPHCLFLLVLSV VYGLFGLLNLKVIPENPRELAANDVV >gi|319805509|gb|ADMF01000009.1| GENE 91 117541 - 118596 1167 351 aa, chain - ## HITS:1 COG:VC1607 KEGG:ns NR:ns ## COG: VC1607 COG0845 # Protein_GI_number: 15641615 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Vibrio cholerae # 38 342 18 322 324 223 44.0 4e-58 MTTSQQTAAPAPKHDSRPSASSILPAVFGGAVLLGAFGFIGWGIWQAMHPAPVPLQGLMD ATTVSVAAKVPGRLAAVTVKEGDQVAAGDAVARLTLPEIEAKVAQAKALHEAAAAKADMA QEGARTEELDAARADLARARAGEHLARVTNTRVAALFKDGLVSTQKRDEAAAQLKASSEL AAAAAAKVTALENGARRQEKTAAEALAAQAAGGVAEASSLAGEAEVRTPASGEVTRVVMH AGEVVPAGFPVVLVTDLADSWAVFNIREDELKNIRVGTILKANIPALGADMDFSVYWINP RGTYATWRATRQSSGYDLRTFEVRARPSAPNPDLRPGMTVIIDRSQLDALQ >gi|319805509|gb|ADMF01000009.1| GENE 92 118694 - 120118 1372 474 aa, chain - ## HITS:1 COG:VC1606 KEGG:ns NR:ns ## COG: VC1606 COG1538 # Protein_GI_number: 15641614 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Vibrio cholerae # 16 450 5 456 476 159 28.0 1e-38 MLSAFRSSALHALLISSALTCTGVLAAPAGSADAMSFSQARQQFHERADVFRADAADVER ARHAADSAKALSGPKVDLVAMQVEGRKDIELNLDIPQPISGMLHKNVLSYSTEYDLSGPR AMISANWPIYTGGLITAQQNLLEHKVREASAAQTSRLETKDAELAARYWGVQLARSVEDL RREMLSDEEEEVQRAKRFEVKGMISKIERMSVEVSRDAARRELIAAETNARVAESELMRS LRLNKLPELATPLFILKGDLGTLDDWQSRARLNSPVLMQIDAKRSQAEEGVRAAEAAFHP QVFAFGMKNLVKHYLTVVEPDWMVGIGVKFTLWDNRDRFSNIAASRSQVTQAEAARAEAD NSLAQAIEAAFLRTTQAREEFELTTSTMALAAENLRLREASFAEGLSTAIDLREARTQLV GAEIAQRAAAYKFVVSWAMLHATAGVMPDFEATLGRSDFVNAQQMHKTQASAKR >gi|319805509|gb|ADMF01000009.1| GENE 93 120471 - 121124 1023 217 aa, chain + ## HITS:1 COG:mll0991 KEGG:ns NR:ns ## COG: mll0991 COG5514 # Protein_GI_number: 13471107 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 1 208 1 209 216 195 47.0 5e-50 MQYSKDIYTENPADPDTLANLGPLAPLAGTWYGDQGVDTHPVAEGTESEPFVETLTFELL DPQNSGPQQLYGLRYHVAVTKPGELTAFHDQVGYILYEPASGKIYMTLAIPRAQVAMAEG TAKPGDKQIHLRAERGSTVNGICSNPFLEKNFQTTSWDVTFTFNDDGTISYEEDTVLVIP GVPKEFHHTDKNTLKMIAAPRPNPMMVEEGLCNRNPK >gi|319805509|gb|ADMF01000009.1| GENE 94 121294 - 122436 1528 380 aa, chain - ## HITS:1 COG:VC1188 KEGG:ns NR:ns ## COG: VC1188 COG0281 # Protein_GI_number: 15641201 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Vibrio cholerae # 9 380 198 578 588 318 41.0 1e-86 NGMGIPCGKLALYTACAGIAPEKTLPVVLDVGTNREEYLNDPLYLGLRQKRCRGPEYRQL VDEFIAEARRRWPNVLIQFEDFGNANAFKLLSDYQEKILCFNDDIQGTASVVVSGMYSAV RVKGEKMADQKFLFFGAGEAACGIANLLADALIDDGLSREDALAHCYLFDSKGLVTKART DLAAHKQPFAVDAPDTASFLEAVKTLKPTAIIGVAGQPQTFTKEVLEEMAKLNERPIIFA LSNPTSKAECTAEQAYTATKGKALFASGSPFDPVEYEGKTFVPRQGNNSYVFPALGLGAV FSRSKWMPDGMFLVAAKVLATLVSDADLAQGSLYPALSDIRPVSVKIGAAVAAYAYEHGL AQNERPADLEKAVDEFMYRP Prediction of potential genes in microbial genomes Time: Sun May 29 19:22:19 2011 Seq name: gi|319805383|gb|ADMF01000010.1| Sutterella wadsworthensis 3_1_45B cont1.10, whole genome shotgun sequence Length of sequence - 159655 bp Number of predicted genes - 125, with homology - 108 Number of transcription units - 76, operones - 27 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 635 758 ## COG0281 Malic enzyme - Prom 773 - 832 1.6 + Prom 590 - 649 1.7 2 2 Tu 1 . + CDS 775 - 1098 105 ## - Term 935 - 972 6.2 3 3 Op 1 . - CDS 998 - 1465 532 ## - Prom 1533 - 1592 1.6 4 3 Op 2 . - CDS 1616 - 2569 754 ## COG0583 Transcriptional regulator - Prom 2590 - 2649 3.8 + Prom 2559 - 2618 2.1 5 4 Op 1 . + CDS 2728 - 4599 863 ## Acfer_0795 hypothetical protein 6 4 Op 2 . + CDS 4636 - 6048 1152 ## LJ1761 hypothetical protein 7 4 Op 3 . + CDS 6064 - 8508 1545 ## COG1201 Lhr-like helicases - Term 8501 - 8542 5.6 8 5 Tu 1 . - CDS 8570 - 9799 1481 ## COG2814 Arabinose efflux permease - Prom 9918 - 9977 3.2 + Prom 9755 - 9814 1.8 9 6 Tu 1 . + CDS 10035 - 10451 201 ## gi|296533503|ref|ZP_06896078.1| rhs family protein + Term 10654 - 10699 0.2 10 7 Tu 1 . - CDS 10478 - 11254 849 ## COG0778 Nitroreductase - Prom 11390 - 11449 2.0 + Prom 11242 - 11301 1.6 11 8 Tu 1 . + CDS 11439 - 11756 238 ## 12 9 Tu 1 . - CDS 11767 - 12426 700 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 12505 - 12564 2.9 + Prom 12445 - 12504 2.6 13 10 Tu 1 . + CDS 12589 - 13140 154 ## Dd586_2983 putative cytoplasmic protein + Term 13222 - 13271 4.5 - Term 13170 - 13211 8.2 14 11 Op 1 . - CDS 13260 - 13934 1101 ## COG0461 Orotate phosphoribosyltransferase 15 11 Op 2 . - CDS 13959 - 14954 1456 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases - Prom 15044 - 15103 3.5 - Term 14994 - 15037 4.0 16 12 Op 1 . - CDS 15193 - 15528 407 ## 17 12 Op 2 . - CDS 15531 - 15908 202 ## VIBHAR_05694 hypothetical protein + Prom 16138 - 16197 3.5 18 13 Tu 1 . + CDS 16257 - 17357 1185 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 17423 - 17467 9.7 - Term 17409 - 17455 10.1 19 14 Tu 1 . - CDS 17478 - 18641 1266 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 20 15 Tu 1 . - CDS 19062 - 19478 440 ## COG2131 Deoxycytidylate deaminase - Prom 19520 - 19579 2.9 - Term 19585 - 19628 7.7 21 16 Tu 1 . - CDS 19649 - 21472 1773 ## SeSA_A4188 arylsulfotransferase - Prom 21558 - 21617 4.4 + Prom 21512 - 21571 6.2 22 17 Tu 1 . + CDS 21621 - 22613 506 ## COG0583 Transcriptional regulator + Term 22749 - 22784 2.4 - Term 22654 - 22700 11.1 23 18 Op 1 4/0.000 - CDS 22733 - 23290 962 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 23365 - 23424 6.0 - Term 23348 - 23396 0.5 24 18 Op 2 . - CDS 23436 - 24560 1068 ## COG4394 Uncharacterized protein conserved in bacteria 25 18 Op 3 . - CDS 24654 - 27827 1881 ## - Prom 27853 - 27912 3.7 - Term 27863 - 27911 5.2 26 19 Op 1 9/0.000 - CDS 27954 - 28571 249 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 27 19 Op 2 . - CDS 28657 - 30717 1458 ## COG0322 Nuclease subunit of the excinuclease complex 28 19 Op 3 . - CDS 30741 - 31166 332 ## - Prom 31203 - 31262 4.4 + Prom 31340 - 31399 4.5 29 20 Op 1 14/0.000 + CDS 31485 - 32216 695 ## COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component 30 20 Op 2 14/0.000 + CDS 32234 - 32902 1076 ## COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component 31 20 Op 3 . + CDS 32953 - 33681 809 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 32 20 Op 4 . + CDS 33678 - 33866 227 ## 33 20 Op 5 16/0.000 + CDS 33900 - 34418 735 ## COG2332 Cytochrome c-type biogenesis protein CcmE 34 20 Op 6 11/0.000 + CDS 34618 - 36615 2622 ## COG1138 Cytochrome c biogenesis factor 35 20 Op 7 10/0.000 + CDS 36637 - 37176 768 ## COG0526 Thiol-disulfide isomerase and thioredoxins 36 20 Op 8 9/0.000 + CDS 37173 - 37673 632 ## COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes 37 20 Op 9 . + CDS 37680 - 39002 1404 ## COG4235 Cytochrome c biogenesis factor + Term 39014 - 39076 12.3 + Prom 39028 - 39087 3.0 38 21 Op 1 17/0.000 + CDS 39182 - 39961 348 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 39 21 Op 2 21/0.000 + CDS 39975 - 41684 1659 ## COG1178 ABC-type Fe3+ transport system, permease component 40 21 Op 3 . + CDS 41783 - 42784 1411 ## COG1840 ABC-type Fe3+ transport system, periplasmic component + Term 42816 - 42859 3.1 41 22 Op 1 2/0.000 + CDS 42963 - 44081 1151 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 42 22 Op 2 . + CDS 44105 - 44902 757 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 44982 - 45022 11.3 - Term 44772 - 44810 -0.3 43 23 Op 1 . - CDS 45041 - 46108 1271 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 44 23 Op 2 . - CDS 46139 - 46528 340 ## mlr7179 hypothetical protein 45 23 Op 3 . - CDS 46586 - 48022 1678 ## COG1757 Na+/H+ antiporter + Prom 48847 - 48906 9.1 46 24 Op 1 . + CDS 48981 - 49772 1042 ## Vpar_0983 hypothetical protein 47 24 Op 2 . + CDS 49823 - 50296 719 ## Vpar_0982 hypothetical protein + Prom 50405 - 50464 4.3 48 25 Tu 1 . + CDS 50506 - 51822 1716 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 51874 - 51923 11.3 + Prom 51867 - 51926 2.8 49 26 Op 1 . + CDS 52066 - 52332 81 ## 50 26 Op 2 . + CDS 52410 - 53174 960 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 53186 - 53220 -1.0 51 27 Op 1 . - CDS 53326 - 55278 1137 ## Acfer_1439 hypothetical protein 52 27 Op 2 . - CDS 55324 - 60324 4000 ## COG1401 GTPase subunit of restriction endonuclease - Prom 60354 - 60413 2.4 - Term 60389 - 60434 1.1 53 28 Tu 1 . - CDS 60460 - 61329 472 ## COG1397 ADP-ribosylglycohydrolase - Prom 61426 - 61485 5.4 54 29 Tu 1 . + CDS 61514 - 62377 604 ## COG0819 Putative transcription activator - Term 62539 - 62581 2.2 55 30 Tu 1 . - CDS 62650 - 63282 360 ## COG2364 Predicted membrane protein - Prom 63357 - 63416 3.4 - Term 63469 - 63524 8.0 56 31 Tu 1 . - CDS 63559 - 65313 1907 ## COG4690 Dipeptidase - Prom 65390 - 65449 2.3 - Term 65395 - 65434 8.0 57 32 Op 1 . - CDS 65528 - 66445 1059 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 66478 - 66536 17.2 58 32 Op 2 . - CDS 66580 - 67548 1026 ## COG0354 Predicted aminomethyltransferase related to GcvT - Prom 67621 - 67680 1.6 59 33 Op 1 10/0.000 + CDS 67781 - 69124 1007 ## COG1559 Predicted periplasmic solute-binding protein 60 33 Op 2 22/0.000 + CDS 69190 - 69801 666 ## COG0125 Thymidylate kinase 61 33 Op 3 . + CDS 69792 - 70826 971 ## COG0470 ATPase involved in DNA replication + Term 71021 - 71047 -1.0 - Term 70946 - 70994 5.3 62 34 Tu 1 . - CDS 71026 - 72555 1330 ## COG0582 Integrase - Prom 72634 - 72693 2.0 63 35 Tu 1 . + CDS 72726 - 74873 1609 ## COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system + Term 74968 - 75014 8.6 + Prom 75534 - 75593 2.2 64 36 Tu 1 . + CDS 75695 - 77671 2449 ## NT01EI_3640 hypothetical protein + Term 77732 - 77778 9.4 + Prom 77772 - 77831 4.3 65 37 Op 1 . + CDS 77912 - 78409 544 ## NT01EI_3641 hypothetical protein + Term 78453 - 78491 7.4 66 37 Op 2 . + CDS 78506 - 78904 403 ## 67 37 Op 3 36/0.000 + CDS 78996 - 80252 1003 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 68 37 Op 4 . + CDS 80257 - 80964 277 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 69 37 Op 5 . + CDS 80995 - 81420 569 ## DMR_37430 thioredoxin + Term 81457 - 81496 4.1 - Term 81442 - 81487 2.7 70 38 Op 1 2/0.000 - CDS 81509 - 82264 555 ## COG1641 Uncharacterized conserved protein 71 38 Op 2 . - CDS 82297 - 82980 644 ## COG1691 NCAIR mutase (PurE)-related proteins 72 38 Op 3 . - CDS 83029 - 83988 575 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 84270 - 84329 5.1 73 39 Op 1 . + CDS 84542 - 86596 1661 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 74 39 Op 2 . + CDS 86629 - 88488 1434 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain + Term 88525 - 88563 7.1 75 40 Tu 1 . - CDS 88917 - 89201 58 ## - Prom 89433 - 89492 1.9 76 41 Tu 1 . + CDS 89218 - 90213 1144 ## COG0385 Predicted Na+-dependent transporter + Term 90243 - 90284 11.2 - Term 90232 - 90271 8.8 77 42 Tu 1 . - CDS 90491 - 90826 71 ## - Prom 91059 - 91118 1.7 78 43 Tu 1 . + CDS 90829 - 91851 1187 ## COG0385 Predicted Na+-dependent transporter + Term 91890 - 91930 7.0 + Prom 92275 - 92334 3.4 79 44 Tu 1 . + CDS 92423 - 93454 867 ## COG2984 ABC-type uncharacterized transport system, periplasmic component + Term 93519 - 93568 5.2 + Prom 93463 - 93522 5.6 80 45 Op 1 . + CDS 93743 - 94729 1166 ## COG0524 Sugar kinases, ribokinase family 81 45 Op 2 . + CDS 94729 - 95667 857 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 95800 - 95840 -0.7 82 45 Op 3 . + CDS 95851 - 96723 734 ## gi|302860911|gb|EFL83986.1| hypothetical protein HMPREF0189_01349 + Term 96766 - 96812 10.9 - Term 96754 - 96800 8.4 83 46 Tu 1 . - CDS 96919 - 97941 1105 ## COG0385 Predicted Na+-dependent transporter - Term 98069 - 98106 1.4 84 47 Tu 1 . - CDS 98324 - 99031 427 ## Smal_3912 hypothetical protein 85 48 Tu 1 . - CDS 99479 - 101908 2013 ## COG4258 Predicted exporter - Term 101992 - 102028 2.2 86 49 Tu 1 . - CDS 102054 - 102623 549 ## COG0778 Nitroreductase - Term 102709 - 102754 8.0 87 50 Op 1 49/0.000 - CDS 102781 - 103683 1149 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 88 50 Op 2 38/0.000 - CDS 103705 - 104625 238 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 89 50 Op 3 11/0.000 - CDS 104675 - 106246 1964 ## COG0747 ABC-type dipeptide transport system, periplasmic component 90 50 Op 4 . - CDS 106264 - 108144 282 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 108665 - 108724 3.5 91 51 Op 1 . + CDS 108823 - 110022 1246 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 110036 - 110079 8.3 92 51 Op 2 . + CDS 110093 - 110995 1024 ## COG2962 Predicted permeases + Term 111040 - 111085 8.2 - Term 111028 - 111073 8.2 93 52 Tu 1 . - CDS 111094 - 111867 1078 ## COG3971 2-keto-4-pentenoate hydratase - Prom 111955 - 112014 2.3 - Term 111997 - 112035 4.3 94 53 Op 1 8/0.000 - CDS 112069 - 112857 1012 ## COG2908 Uncharacterized protein conserved in bacteria 95 53 Op 2 7/0.000 - CDS 112933 - 113424 846 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 96 53 Op 3 1/0.118 - CDS 113560 - 114141 741 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 97 53 Op 4 . - CDS 114230 - 114817 758 ## COG0457 FOG: TPR repeat - Prom 114993 - 115052 2.2 + Prom 114925 - 114984 3.0 98 54 Op 1 . + CDS 115104 - 116510 1615 ## COG0215 Cysteinyl-tRNA synthetase 99 54 Op 2 . + CDS 116562 - 117599 1292 ## COG0825 Acetyl-CoA carboxylase alpha subunit + Term 117705 - 117774 31.4 + TRNA 117671 - 117759 69.4 # Ser TGA 0 0 + Prom 118040 - 118099 1.9 100 55 Op 1 . + CDS 118210 - 119451 78 ## COG0582 Integrase 101 55 Op 2 . + CDS 119457 - 119924 136 ## Elen_0763 hypothetical protein - Term 119867 - 119903 1.2 102 56 Tu 1 . - CDS 120098 - 120349 111 ## + Prom 120559 - 120618 4.1 103 57 Tu 1 . + CDS 120638 - 122221 454 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family + Prom 122244 - 122303 5.0 104 58 Tu 1 . + CDS 122345 - 122563 150 ## + Prom 123021 - 123080 3.7 105 59 Tu 1 . + CDS 123100 - 123312 73 ## gi|254993653|ref|ZP_05275843.1| hypothetical protein LmonocytoFSL_12148 + Term 123434 - 123466 -0.9 106 60 Tu 1 . - CDS 123841 - 124335 176 ## COG2801 Transposase and inactivated derivatives + Prom 125050 - 125109 7.0 107 61 Tu 1 . + CDS 125130 - 125546 160 ## + Term 125761 - 125820 2.6 + Prom 126326 - 126385 1.9 108 62 Tu 1 . + CDS 126466 - 126837 247 ## Tmz1t_0376 integrase catalytic region + Term 127076 - 127118 -1.0 - Term 126744 - 126779 -0.3 109 63 Tu 1 . - CDS 126911 - 127819 366 ## COG1313 Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins - Prom 127959 - 128018 2.4 110 64 Tu 1 . + CDS 128005 - 128955 832 ## COG0679 Predicted permeases - Term 128983 - 129024 10.6 111 65 Tu 1 . - CDS 129041 - 130471 1734 ## COG4690 Dipeptidase - Prom 130539 - 130598 3.8 + Prom 130478 - 130537 2.0 112 66 Tu 1 . + CDS 130729 - 132636 1496 ## COG0171 NAD synthase + Term 132774 - 132805 0.0 - Term 132466 - 132494 -0.0 113 67 Op 1 . - CDS 132663 - 133310 521 ## Hsero_3711 hypothetical protein 114 67 Op 2 . - CDS 133307 - 134143 738 ## COG4261 Predicted acyltransferase 115 68 Tu 1 . - CDS 134340 - 135545 708 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 135613 - 135672 4.2 + Prom 135707 - 135766 3.5 116 69 Tu 1 . + CDS 135816 - 137951 2166 ## COG4651 Kef-type K+ transport system, predicted NAD-binding component + Term 137985 - 138026 8.4 117 70 Tu 1 . + CDS 138419 - 139444 1251 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 139533 - 139588 10.1 118 71 Op 1 21/0.000 + CDS 140034 - 144629 4735 ## COG0069 Glutamate synthase domain 2 119 71 Op 2 . + CDS 144631 - 146118 1490 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 146154 - 146198 15.0 120 72 Tu 1 . + CDS 146342 - 146656 487 ## COG2076 Membrane transporters of cations and cationic drugs + Prom 146682 - 146741 3.4 121 73 Tu 1 . + CDS 146834 - 147358 44 ## + Term 147399 - 147431 -0.6 122 74 Tu 1 . - CDS 150438 - 150767 144 ## - Prom 150848 - 150907 3.9 + Prom 151614 - 151673 2.5 123 75 Tu 1 . + CDS 151704 - 152264 29 ## + Term 152346 - 152405 5.0 + Prom 152274 - 152333 3.2 124 76 Op 1 . + CDS 152575 - 156531 4779 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 156585 - 156635 11.5 + Prom 156618 - 156677 2.5 125 76 Op 2 . + CDS 156746 - 158953 2082 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 158960 - 159002 11.1 + 5S_RRNA 159357 - 159414 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|319805383|gb|ADMF01000010.1| GENE 1 2 - 635 758 211 aa, chain - ## HITS:1 COG:STM1566 KEGG:ns NR:ns ## COG: STM1566 COG0281 # Protein_GI_number: 16764910 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Salmonella typhimurium LT2 # 8 209 16 217 565 214 53.0 6e-56 MSNCSHKAGAALFRCPFANKGEAFTKEERAEYGLSGLLPTAVSTVDQQVERMREMLNRFE KPIDKALLLDSIRNTNEDLFFQLLTRYTAEYMPVVYTPTVGEYCQRFSHIFRYPRGLFVS LEHLGHVREVIERAPNKEVDVIVVTDGERILGLGDQGLNGMGIPCGKLALYTACAGIAPE KTLPVVLDVGTNREEYLNDPLYLGLRQKRCR >gi|319805383|gb|ADMF01000010.1| GENE 2 775 - 1098 105 107 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRFQPEYGGGAKLKLDLDRCLCGKVKSAVSCRGKIFAGYRCRFSGVIWNYRQFSDMKKGE PDRTLLVAAADWEKAMGNTKSLGRKMGRASSRLGNKAAGGGDPLRHV >gi|319805383|gb|ADMF01000010.1| GENE 3 998 - 1465 532 155 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRSAKFTVLGVLGAVLLLSGCTTYVSVASDPEGAVITSADGSETYGRAPVTIEYDRDTL EANLGKVPGFVATWPSGAKAATEAPYVVRDFKYGAQIELQRPADAPGLEEDLRFALEQAQ ERAKRAEADRRRLQLYYQGGWMHGPFFGPGFWYFP >gi|319805383|gb|ADMF01000010.1| GENE 4 1616 - 2569 754 317 aa, chain - ## HITS:1 COG:RSp0692 KEGG:ns NR:ns ## COG: RSp0692 COG0583 # Protein_GI_number: 17548913 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 10 309 18 320 321 104 28.0 3e-22 MAILDTPQPDLSLEELRFLVTVAKTKSLTTAASQYGISMGAASRRLSHLREVFDDELFIR SGVTMLPTMRMRRLLPRVLDLLAAGGALLSRDNVGLADSRRIVRLLAADSAVMTVFPLLV RQMAKDAPNASIELNPLSGDFLEQLRAGRADIAVYPLDTVPKDFHRLELYQSRRGILVRQ GHPLIKKYEKAGRIELDDLRAFKHVMMNLPGTPELSPAAYQQYAFEVGISLPYFLGVPYV LADTDYVYIGPVVTLMHCLRLPDCNLRVLPAPPEVSPFTPAIIWHHGAHTDPFLQWVRGV LLQSAREEAKRYNAIEI >gi|319805383|gb|ADMF01000010.1| GENE 5 2728 - 4599 863 623 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0795 NR:ns ## KEGG: Acfer_0795 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 84 622 24 521 523 115 26.0 6e-24 MSQIYADEVIPPRAADSRGQNKTNAEDAGSDWDFLELNGKAAAERSSTMQGDGSITLKSS RDEAVRRQRAHFRGAPDTPSPTLSQKTEPDIRDRAFREVLARLKEAQQRAAADGAAAGGV FRAMGMAAADYEDVSGQRQRFLAFCPAYDMMTQGQLRTYFAWRTDVRRAMAAAQPVPRPV SSSYAVLYLMELVNGIGTSGPEESYQTAQNFWEAYRRFDFTIDRLAMSWLQDLADFWGLV GEQLSQNQWAPSNAPNDQQLRALIDCQAALGDDLAIGGLLFTLSDYAPEKNAFFKLTRAS QASKQEGMDEERLTKVFRLAGTAWRQWVQDVPRSQRLKMLGCAAGARRRLFQNGLFDMTQ APDRSVVTADGRTLTFSDGLCFEERIAESRTSRMMFLAFLKQSENMIRRQTSGFKPVKNL ADPSVVQAFEIVAAKEAEARRRAANPARKIDFTRLGNIRTDAEVNRDRLVLAEEIAESAQ HDDQATYEEPHPSEAVQGLLARQSEMLDGSSAEDSSALRRTDKKTTAPAPAMLPPQFEPE SVPLSGALKVSPAGAGLTPELQSALAELLHHGRTDCAGLTPAMFVDRINELLFDAVGDAV LEMRPAGPAVIEDYIDDVKRIIL >gi|319805383|gb|ADMF01000010.1| GENE 6 4636 - 6048 1152 470 aa, chain + ## HITS:1 COG:no KEGG:LJ1761 NR:ns ## KEGG: LJ1761 # Name: not_defined # Def: hypothetical protein # Organism: L.johnsonii # Pathway: not_defined # 35 470 8 444 444 550 59.0 1e-155 MSTSDTSKSSPQNPQARSAASGSASAEHPSTQPLKPPKRIARTILAALKGGVVPRIGLGW IAVGRRLEIEALLNDMEVVRDGGASFRFIVGRYGAGKSFLLQTLRTYVMERGFVVADADL SPERRLAGTKGQGLATYRELVQNFATKTMPEGGALGLILERWMAGLRAELAAEGVQPGTP EFLAGGEAKILERMHALGEVLHGYEFSQLLIRYFRAMEAGKDEVRARVVKWLRGEYPTRA QAKAELGINLVVSDDNWYDFLKLFALFLRGAGYEGLLILIDELVNLYKIPNSVSRQNNYE KILTIYNDMLQGRARGLGVVMSGTPQAVEDQRRGIFSYEALRSRLAAGRFSQDGRRDMMA PVIELEPLTPDELLVLIDKLAHMHADLFATGLVLSDQALARFLELEYDREGAATHLTPRE IIRDFIEALNILAQNPDLTVDALFGTKAFQSAEHSEGDGEAEDEYAEFNI >gi|319805383|gb|ADMF01000010.1| GENE 7 6064 - 8508 1545 814 aa, chain + ## HITS:1 COG:alr3331 KEGG:ns NR:ns ## COG: alr3331 COG1201 # Protein_GI_number: 17230823 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Nostoc sp. PCC 7120 # 4 783 5 722 722 539 38.0 1e-152 MTVFERYAPFVQDFIYAHRWEKLRSVQVAAGNAVFNTDKHVLLCASTASGKTEAAFFPIL TLLSEEPPASVGALYIAPLKALINDQFERLTDLCAEGGIPVWAWHGDVAQSRKRKLIEHP SGILQITPESLEALLLRKHSVIPRLFGDLRFIVIDEIHSLMRGDRGGQTMCLIERLARLS GSDPRRIGLSATIGDPQKAADFLCGSSRRGAVVPQFEQPPVRWRLAMEHFFIAKKEEPHR TDYAPVMVDAQVSGQSAADASDAGKAAGDALRQASQKPRPGAHSSEASAQLELESASDQA PASADPGLAYVFEHSAGRKCLVFSNSREECEAVTSTLREYCRRAGEPERFLIHHGNLSTP LRLDAEALMKEGNALLTVCTTATLELGIDIGRLERAFQINAPFTVSAFLQRMGRTGRRGS PPEMRFVMREDEVDSREMLPAQLPWELIHGIGLVESWREDHWVEPPRLERLPFSLLYHQT MATLASEGELTPAELARRVLTLSPFRRISPQDYRTLLLHLLDTDQIQRTERGGLIVGLAG ERVTSGFKFYAVFQENEEYSVRADGQELGTLVQPPPAGEKIAIAGRVWEVEEVDPKRHIV WCRLTEGRVPAFFGLCPGDIHTHILEKTCEVLCSDTDYPYLMPNARKRLAQARSLAQHSG MTTTPLINLGGSFWALFPWLGTYPFLALERLIRIHAAADIGLTNFETSRPWFIVLRMKAS APEFFRALADAADRVQDPMCYLYPDEVPLFEKYDEALPAELVRKGFACGVLGIDEMRARV KSWAGAFHAGTESAARLQTEDDRQLSGSPQKTAP >gi|319805383|gb|ADMF01000010.1| GENE 8 8570 - 9799 1481 409 aa, chain - ## HITS:1 COG:STM1522 KEGG:ns NR:ns ## COG: STM1522 COG2814 # Protein_GI_number: 16764867 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 13 372 11 370 396 266 45.0 5e-71 MSASQSAQTGFRAWIPVIGLAFAAFVFNTSEFLPVGLLPDMAASLNESVSFMGLVITGYA WVVSIMSLPLALLTARFERKKLLLFLLGLFAICHFAVLWVDSFWSLYATRIGVALAHSIF WSIMNPLAARMAPAGKRATGLAAVMGGTIVATVLGVPLGTKMGHLFGWAESFFVIGAAAF LVLMLLWYVLPQCPSRSAGSLKSLPVILKRPALLQLYGVTMITMLGQFTAYSFISPILEH SAGMSGSDVVDVLLLFGLAGIIGTVLSSKTVDRYPSASLTVPLVVLSMSLFLLVPLCSSW LSLVPLLLLWGAAQTAICMALSASVLVVASDAADVATSLYSGIFNIGIGGGAFVGSLVSQ HFGFTPVAFVGGTFITISALFCLGVYFRTGSALLPHDDLSREVGEPHKL >gi|319805383|gb|ADMF01000010.1| GENE 9 10035 - 10451 201 138 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|296533503|ref|ZP_06896078.1| ## NR: gi|296533503|ref|ZP_06896078.1| rhs family protein [Roseomonas cervicalis ATCC 49957] # 40 138 36 134 134 97 66.0 3e-19 MLMLKHFRFIRIHLAAAAVLMGGILVLSPMAAAEPSSSIYDASGRYLGRIDADGRAYDRS GRYLGKTDADGREYDAAGQYQGRTDESGRRYDASGRFTGRTDADGRVYDAAGRYQGRTDK SVRRYDASGRYLGREDLR >gi|319805383|gb|ADMF01000010.1| GENE 10 10478 - 11254 849 258 aa, chain - ## HITS:1 COG:PAE2336 KEGG:ns NR:ns ## COG: PAE2336 COG0778 # Protein_GI_number: 18313271 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pyrobaculum aerophilum # 22 249 34 254 274 72 27.0 6e-13 MKIQKKALAAIAEITNELGDQFDELRAEIDRRFGERRSEGEVFRPLPAPQGMDMSVLTAL NERRSQRNFSNEPLPDQLLSNILYAADGINRKGGRRTTATALNWRETDIYVLKANGIWRW VPERNGVLFCSLHDVRDQTYLLQTQLTVPPVELVFVANYARARNFLSNAVETIAPKIKKT AVDEAEIREARIRACTLDVGIKLQSVYLAAAAMNLACVARTGFRTDKISAALHLKPDEVV IAAQSLGFPAKSILDHLK >gi|319805383|gb|ADMF01000010.1| GENE 11 11439 - 11756 238 105 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPAEKAEAFASLIKAAFRLAGEEPAVWDSALGLTQISGSRSAEAPGVALKRLRQENHMTQ RETARLLGCTQARISDMEAGVKPISAEAAQLFAKRFGVSPALFLK >gi|319805383|gb|ADMF01000010.1| GENE 12 11767 - 12426 700 219 aa, chain - ## HITS:1 COG:mll6762 KEGG:ns NR:ns ## COG: mll6762 COG2197 # Protein_GI_number: 13475642 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Mesorhizobium loti # 2 208 3 214 225 112 33.0 4e-25 MKYLIVDDHALVAGALTLLLEDRDPEADVHTAATADAALELVDREGDADLLILDLSLPGV TGTELMEEIVRRQPMLKILVVSGLADQESIMRVLQLGAAGFVPKSLDTELLSSAIDFVLK GGVYIPSKLLTESQKDGFFTRTAARLKAPESAPPHLTDRQLDVLAQLAKGAPIKRICREL DLSEGTVKTHVAAIYRSFGASNRTEALIAARRAGFDIDL >gi|319805383|gb|ADMF01000010.1| GENE 13 12589 - 13140 154 183 aa, chain + ## HITS:1 COG:no KEGG:Dd586_2983 NR:ns ## KEGG: Dd586_2983 # Name: not_defined # Def: putative cytoplasmic protein # Organism: D.dadantii_Ech586 # Pathway: not_defined # 16 130 3 117 121 127 53.0 2e-28 MSTEVSFAASDSASASFDALLARLSHSRFRSRFHLGAADIELIGRKSLPVVREHAVRFLL ERLAPANPANDGRQTPWRGHPVFRAQHACACCCRGCLFKWQQIPPDRPLSAEEVERLADL LIAWISRELVRAGRDPQTYQAPHAAESGFPSSSNKTRGRKRAEAPGSRSAKASFAEPSLF DEV >gi|319805383|gb|ADMF01000010.1| GENE 14 13260 - 13934 1101 224 aa, chain - ## HITS:1 COG:AGc704 KEGG:ns NR:ns ## COG: AGc704 COG0461 # Protein_GI_number: 15887749 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 216 45 258 266 118 33.0 1e-26 MYVSPIANDILAGHLINYGAVSFMTDSPMRLKSGLVTPIYVDNRSLTAHPDAWRDIIETM CSRIAQLGLKFDIIAGVEGAGVSHAAALAYRLGKPSIFVRQRPKTYGDHSRVEGSSVKGK RILIIEDHISTGLSLLSAVEGIKAEEGIVEDCLAITSFGIDETIKLFQNEKVVCHELLDF TLVLDKAVEVGKIDQAQREVLIDWLANPWTWAARHGLTPTGNEN >gi|319805383|gb|ADMF01000010.1| GENE 15 13959 - 14954 1456 331 aa, chain - ## HITS:1 COG:PM1882 KEGG:ns NR:ns ## COG: PM1882 COG0402 # Protein_GI_number: 15603747 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Pasteurella multocida # 10 331 7 328 329 434 62.0 1e-122 MSTTDNAPLTIRDMIEPAIKAAGGWVNTHAHADRAYTLSPDVLEMRRTCTLQQKWDALDR LKRESTEEDFYRRFSLFFENQIAQGVTALATFVDIDPQSEDRAIMAGLRAREHYQDQLTV KFANQTLKGVIHPEARKWFDIGADLVDIIGALPKRDERDYGKGAEAFDIILSTAKERNKM VHVHVDQFNESLEYETEQLCEKTIEHGMEGRVVAIHGISIGAHSKAYRERLYALMRRAQM MMIACPTAWIDTPRSEELVPMHNSMTPVDEMVPAGITVALGTDNVCDAMVPWNAGDMWHE MTTLATGCRFDYFDELVKIATVNGRKAIGID >gi|319805383|gb|ADMF01000010.1| GENE 16 15193 - 15528 407 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPFLLLILPILAHILLAAHLLFHGLGLFVSVLPLLAVPLLFIPKRWMVWLQSALLVLWGI EWLRSAWELVLQRMAWGEPWMRAGAIVAGCGLFSWLTILVFRQSRIRNFYK >gi|319805383|gb|ADMF01000010.1| GENE 17 15531 - 15908 202 125 aa, chain - ## HITS:1 COG:no KEGG:VIBHAR_05694 NR:ns ## KEGG: VIBHAR_05694 # Name: not_defined # Def: hypothetical protein # Organism: V.harveyi # Pathway: not_defined # 1 99 19 115 128 97 49.0 1e-19 MVEEFCSYHHGTSGHMLCPKCQAFLDYALKRLACCPYGEDKPVCGSCKIHCYKPAERETA RQVMRWAGPRLIFSHPLMAVSHVVDKLVHKAPDKPRNTARAKPAVKPAAQTPSPSLPPKN NNKSK >gi|319805383|gb|ADMF01000010.1| GENE 18 16257 - 17357 1185 366 aa, chain + ## HITS:1 COG:BS_amhX KEGG:ns NR:ns ## COG: BS_amhX COG1473 # Protein_GI_number: 16077370 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Bacillus subtilis # 13 365 19 371 389 211 37.0 2e-54 MTIYDPTALRRELHEMPELALHEKRTSAYVAEKLKALGIETHENVGGSTGVVGIIRGTEP GPVFMLRADMDALPFVIDGKPCCIHACGHDGHTAMLLAAASRLKDKIKRGTLKLLFQPAE ETLQGAPVIIKAGVIDDVDYALSAHIRPIQDVPAGMLCAAVRHTASTTLNIVIKGRGAHA SRPHLGINAIDAACALMNGIQAIWLDPKMSWSAKATQIHADSGATNTVPDLARITYDCRA QTNELMDDLLAQIRRVAAGTAAAYGAEAEVILRDQSPACLYDDDFVAEVAEAIKETAGPD QLAPDCGGGGEDFHNYKLARPEIKAAYFGVGVGATPGLHASTMHFDDTLLPLGVAVFENV VLRHLG >gi|319805383|gb|ADMF01000010.1| GENE 19 17478 - 18641 1266 387 aa, chain - ## HITS:1 COG:CAC3299 KEGG:ns NR:ns ## COG: CAC3299 COG1979 # Protein_GI_number: 15896543 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 386 1 388 389 399 49.0 1e-111 MENYDLYLPTHLIFGRGRIDELPSLLPAKGSRILLAMGGGSIRRIGLYDKLRELLSDYEV FDFSGIEPNPKISTIRRAVELCKAQKIDFIVAAGGGSVIDAVKCIAAGAYYDGDPWDLVL DHSRIGRAIPFCAVLTLSATGSDYDNSGVISNSATNEKMFLAASNLFPQASILDPTYTFT VPANQTAAGSADIISHTFEQYLVKEGNPFTDAMCEGVLRTVFEYAPKAIEAPDDYEARAQ LMMVSSFGCCGLLSIGRTPSPWPCHGMEHEISAFYDITHGVGLAILTPNWMRWSLTPETA PRFAQYGVRVWHLNPQDDVMTNAQKAIEKTAEFFKSIGLPSKLSEVGIDDKHFEEMADHV AKIWWSFDGALRPISRSGVLEILRMSL >gi|319805383|gb|ADMF01000010.1| GENE 20 19062 - 19478 440 138 aa, chain - ## HITS:1 COG:AF1764 KEGG:ns NR:ns ## COG: AF1764 COG2131 # Protein_GI_number: 11499353 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Archaeoglobus fulgidus # 10 135 10 143 157 89 37.0 1e-18 MDIVKDNLMYMRIAQIAAERSYAKRLKVGCVIVKNHSIISFGWNGMPTGYDNCCEMEVDG KLVTRPEVQHAELNAIAKLAENGYSSKDAAIFITHSPCIDCALLIQKCGISQVFYHELYR SREGLDFLERAGIKVTQL >gi|319805383|gb|ADMF01000010.1| GENE 21 19649 - 21472 1773 607 aa, chain - ## HITS:1 COG:no KEGG:SeSA_A4188 NR:ns ## KEGG: SeSA_A4188 # Name: not_defined # Def: arylsulfotransferase # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 2 606 4 607 607 754 59.0 0 MQFQKTALALCAAGLLSLPGLVAASGGPSGSAVTFAVQGNIGEVIVNPYKLAPLTAIIRN GGYELQDVEVRIVPKQNGQEIKYKVSKRQLKNNAGIPIFGLYPDYLNTVEVKYTRLFNGK AEKFSESYQFYAPPVFTLSNGMPAQKGTMFQTEVIKVDPQFKNRLYLVDNQLSPISPHGA RFTWNNPSGGALEWAFNSQVGIIDTSGDLRWYLLNGIINDPADPWTSGFMMGFQQTNDGA LTWGFGQRYVKYDLMGREIFNRRLPESYSDYSHAFDNAQNGHSFLRVASSDYRRPDGKRV HTVRDVIVEIDQNGGVVDDFRLFDILDPYRSNVVQAMDQGAVCLNIDESKSGQTLSTEDL AKMDANGQFGDIAGTGPGRNWAHVNSVDYDPTDDAIIISSRHQGIVKIGRDKKVKWILAS PEGWKKGWAEKVLTPVDHNGKPIKCENSKCEGSFDWSWTQHTAWRIDSKSNKDVLYLSVF DNGDARGMEQPPLPDMKYSRAVIYKIDQKKMTVEQIWEVGKELGHPYFSPVTGLTKYMED TDTMMVYWSTAGLGASPEKKGNKLGRLNPHICEYKWGETTPVVDIVLWDTFGYQAFPINL EKAFTQN >gi|319805383|gb|ADMF01000010.1| GENE 22 21621 - 22613 506 330 aa, chain + ## HITS:1 COG:RSp0692 KEGG:ns NR:ns ## COG: RSp0692 COG0583 # Protein_GI_number: 17548913 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 11 297 14 297 321 90 29.0 5e-18 MIDHQDTDLPLSIRDEAFCQILRLMCGLLREPVLTRAAESLGITTPTASRRLARAREWFG DELFIYSAGRMVPTRRMIELEPVCRRMIENLDELFTSPHPFDPHKAEGVIRIVAVDNAFL TLLSPLIVELEATVPGVKFEIYDRYSNMLESMRDAKIDLAIYSTEGKTVPAGFIEMPLFT SDHVLLVRRNHPLKAIAAHNGGLTFEDTARFKHIGIALVMGSTENRFIIGQQCNLADKIS CEMPYFVAGACLCSESDLLMRMPRETALKLARYFPVEILRQERGLKLPWRPGLFWYRSSD TPLLTWVRSKITIGAKRIFEEAEELLPFDR >gi|319805383|gb|ADMF01000010.1| GENE 23 22733 - 23290 962 185 aa, chain - ## HITS:1 COG:RSc1069 KEGG:ns NR:ns ## COG: RSc1069 COG0231 # Protein_GI_number: 17545788 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Ralstonia solanacearum # 1 183 3 186 188 246 67.0 1e-65 MKTAQELRVGNVFMVGKDPMVVVKAEYSKGGRGASTVKMKMKNLLTNATSETVFRADDKF EDLVLERKEVTYSYFADPHYVWMDNEYNQYEVDADVMAEALKYLEDGMPAECVFYEGRPI SIELPTILVREVTYTEPAVKGDTSGKVMKPAKLATGFELAVPAFVNTGDKIEIDTRTSEY RNRVK >gi|319805383|gb|ADMF01000010.1| GENE 24 23436 - 24560 1068 374 aa, chain - ## HITS:1 COG:RSc1070 KEGG:ns NR:ns ## COG: RSc1070 COG4394 # Protein_GI_number: 17545789 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 5 371 4 392 396 166 36.0 8e-41 MSFRFSSADIFCRVIDNFGDAGVCWRLACRLKSLGIAVRFITDRPDVLQLIAPHAAEEAQ IAVWDDFAKAAAQPDFQPSELIIETFGCRLPEAYDEAAAKLRAQRLAARQTPPFYFNLDY LSAEDWVEGSHNMVGLHPRLDLPKLWFFPGVTDRTGGVLIEDDYEKRQQAFALQKKDFLL ELGADPQRTTVFIFTYPVNDLQTAAAALRQAAANRPMNALLAPGEASDILEKLLSGAGSE LRTVRTPFVAQKDFDKLLWASDAAIIRGEDSFIRAQLAGLPMLWSTYPTEDHAHRVKLDA WLTRFVPKLAPWRLSPSYTKLAQDWLEGSAASEDICRFLLEARRYAPGFDVWRRELLERG DLARHMLERAELGM >gi|319805383|gb|ADMF01000010.1| GENE 25 24654 - 27827 1881 1057 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAAQRNVQKKKSKRKNTRRQNQDGHPRSEAPFLKEAPISSAVAEALRAEAAAPTDHGALE EPEASAPKECLTSDASAQTKAKPAALPAAAERPAETAAVEPSEEKKADQRTAIVFSPETN LTEGVDAVSGAAPSIAPSGAPNFVLVAATPPPETTVERKTRTADTSSIAPAPAETPTVSA EPAPLAAANAEKDTADEESAPPAADLDHARSLRPFGMILGGWAILLLSGALLAFAAANWT AWSDTLRLTIFGGAALLSFLPTVCCRYIHRTLQDCSAALGGLLTALLLVVIGQTWQTGDD AASLLLGLSAILTPWLLVIRRPLIFTLWYAALAIGLGLKGFERFGDAPDIFTPMLIAAVF AAAAAAALGLSLRLRPSPGLRASALLPALNFSVLLGLLPPVAFALDNAGLESLAGLALLF LAGALIGSAALWSSRLPELRALAMLTLAGWGNALLILFMHPYLGHLSSASLGYALTLLNG LVCLAGTLSAARFSRRRTMQAKAQDASSQPGTGSEKPCAASHSLRASLEKAAASAPSAAA GILGALAITLAISTLLMFDVSTFFVEVLFLVIGLTLGGWAAVQAQRAQKTNAVKVLSASG ITLQTAGLLFAAVGWLMLASDLSGQSPWTMIMPATALLCAWLFPWRAVLFAALLSPLYVN MPLPGNAAWSDVLFILTLLTGLSVLFGKSAAQRAESLLPALLAAAWTSGLLQPESLVHQP VPTGHFAQMPSIGFMAAAALLLIVCLRGLAADRHRSLSLQRGAAFIAAAVAAVAAVWMLP AAPDLLLLSAAILAALSLGGKRLAAAAFIATGGLLFCAADLFWTAAAPGVNPLLEAAKIY GVMGLAFALSSLALCLRRFSGSSVKMFGFGLQQGFALAALMITAAAVAFTALNRIDLLEH GQSRIVRLVPADPRDMLLGDFMALRYAFDDEALQVRQSAEAAVHVEGFCLSMRNTQNPPN DASALNQAETADKLDQWIIVGAKLRRDGTVSACPKGTQWELAALAGEPKVPRRWFFPSGE AHRYEPAAAADFRCLGRNCILAGLLNANGEPIARRAE >gi|319805383|gb|ADMF01000010.1| GENE 26 27954 - 28571 249 205 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 3 177 486 666 904 100 38 4e-20 MVLTWLRIALIPVVLGVFYIPETWLAPHWVNVIACVTFVVAAVTDALDGFLARRYEGWAT RMGAFLDPIADKLVVSAALVALVGLDRLDMAVAMIIIGREITVTGIREWMAKIGESGRVK VNWYGKTKTIAQMTAIPCLLWDDPIFGIDIALIGTGLIWLAAVLTIYSMYVYLSAAVPFF DEERARRAAERQAAVLKASAEFKHQ >gi|319805383|gb|ADMF01000010.1| GENE 27 28657 - 30717 1458 686 aa, chain - ## HITS:1 COG:RSc1071 KEGG:ns NR:ns ## COG: RSc1071 COG0322 # Protein_GI_number: 17545790 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Ralstonia solanacearum # 13 667 1 654 654 644 53.0 0 MSTKAINQQKQTVPAADEQSAPAPWGNASADAEAASCSAVRDVRTFNPSEEVRTLPHLPG CYRYFGADGTCLYVGKARDLKNRVSSYFRKTGLSPRIALMVSRIARIETTVTRSEAEALL LENNLIKTLKPHYNIRLRDDASYPYIRIGAGDFPRLSYYRGGVDKRSKFFGPYPSSSAAR TAIEMLQKAFQLRTCEESVFKNRSRPCLLGQIGRCTAPCCGLITKEAYAADCRRAEQFLE GRSIDVLNDLEKRMWAASDAWQFEEAAHLRDRIAALTQMRHQQAIETTGGDVDADIVAAS IGQGIVCVNLAMVRGGRHLGDRAIFPKAGDRAPTAQDLMPSKGEVIEAFVSQHYAELPIP ALLIVEPDPADPELPARLSSLLTDLAGRRVPVVSEPQETRRRWLEMCIQGAQIALARRLA ESGTQTARLNDLMAVLGPSFAPKNDDPMEFSVECFDISHTQGEATQASCVVFREGRMQSS LYRRFNIAGIEPGDDYAAMKQVLARRYAPAARGEAELPTVVLIDGGRGQVEMAREVFEDL GLDVGAIVGVAKGEGRKTGLETLVFPVIDGHRREPLILGEMSRALMLIAEIRDEAHRFAI TGMRAKRAKTRNTSKLEDLSGVGPKRRAKLLGHFGGMKQLKNASAEDIAQVPGISRKLAE QIYSQLHTAVPANTGAALSTESGEQP >gi|319805383|gb|ADMF01000010.1| GENE 28 30741 - 31166 332 141 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLMPRQSSVALFLCASAGAALLLSGCSSATQELEKAFDSRVNIEPVVGSIWRISAERPK VESSARIADFVYERAKAFCTDKGMGMMPLTGSSSAASADGQPAKAWLEFRCASPEKVERE YKGITLHFDELLGDDGKKKKN >gi|319805383|gb|ADMF01000010.1| GENE 29 31485 - 32216 695 243 aa, chain + ## HITS:1 COG:HI1089 KEGG:ns NR:ns ## COG: HI1089 COG4133 # Protein_GI_number: 16273017 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, ATPase component # Organism: Haemophilus influenzae # 9 203 4 197 212 185 47.0 6e-47 MTTPSSITQPLIEVRGLTCERGERTLFTGMSFTVAPGSLVRIAGSNGAGKTTLLRLLTGL MRPAEGEIFWRGEPILKAAQDFWRELCYIGHRNGVKDDLSVMENVLINARIASLSCTPEA ARAALAAVGLSDYEDVPAGQLSQGQRRRVALARLWLSESVPLWILDEPFTALDVKGVARL ADLVSKHVAEGGVVMLVTHQEVPVDPKHLFVIEPERWAPKRRSAVERAMADAAAAEAESA ARD >gi|319805383|gb|ADMF01000010.1| GENE 30 32234 - 32902 1076 222 aa, chain + ## HITS:1 COG:HI1090 KEGG:ns NR:ns ## COG: HI1090 COG2386 # Protein_GI_number: 16273018 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Haemophilus influenzae # 4 220 2 218 221 151 47.0 9e-37 MFNLFMTILKRDLTLSLRRKSDLAQVIFFFAVVVTLVPLGVGAETNILRSIAPGVVWVAA LLAALLSLPRMFATDHEDGTLEQMLVAAEPVPVIVVAKVAAHWIVTGVPMTIFATIFGVM FDLELDVTLVMVASLLIGTPVLSLVGAVGAALTLGLRAGGVLTSLLVLPLYIPVLIFGSG AATAAAMSLSPASHFMIVGGLSLFALALAPFAVAAALRIAEQ >gi|319805383|gb|ADMF01000010.1| GENE 31 32953 - 33681 809 242 aa, chain + ## HITS:1 COG:VC2055 KEGG:ns NR:ns ## COG: VC2055 COG0755 # Protein_GI_number: 15642055 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Vibrio cholerae # 11 237 15 242 250 203 48.0 2e-52 MSTSITLEGFYRKAGKLIPWFMSAALVLFIVGVYLGFFVCPIEARQGNSYRIIFIHIPAA WLAMSLYLLMAVASIVGLLKNSRLAFILAQAMAPTGALMGFIALFSGAFWGRPTWGTYWV WDARLTSMLILFFLYLGFIALHSAIDDKRRADQAASVISIVGAVNVPIIYFSVRWWNTLH QGASITSSGSSIAPIMLNTIFIMLAAGTLYGAAVVLSRTRTMILERERKSDWAQKAALEG KL >gi|319805383|gb|ADMF01000010.1| GENE 32 33678 - 33866 227 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNNWNSLADFIYMNGHGYYVWCAYGAFVLGVLFELYGLVTRRRAICRRIMREARAAQSTL ES >gi|319805383|gb|ADMF01000010.1| GENE 33 33900 - 34418 735 172 aa, chain + ## HITS:1 COG:PA1479 KEGG:ns NR:ns ## COG: PA1479 COG2332 # Protein_GI_number: 15596676 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c-type biogenesis protein CcmE # Organism: Pseudomonas aeruginosa # 4 139 5 140 162 133 50.0 1e-31 MNAKTKKLALIGAAAVVLCAGIFMALQAFNENLVFFFSPTQVAAKEAPVGRTFRLGGVVE KNSVVREKDGVTVHFRITDTAQTVNVEYKGILPDLFAEEQGVVAQGKLNEAGVFVASEVL AKHDENYMPPEAAKALEDAHKAGVAKAHAQGMDSKSHAEAVKSGAPMPANHP >gi|319805383|gb|ADMF01000010.1| GENE 34 34618 - 36615 2622 665 aa, chain + ## HITS:1 COG:VC2052 KEGG:ns NR:ns ## COG: VC2052 COG1138 # Protein_GI_number: 15642052 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Vibrio cholerae # 1 646 1 645 651 625 53.0 1e-179 MIPEIGHFALILCLALSIVQGVLPLVGAARGSGPLMAVARPAAAANALFGTIAFGCLAYS FYISDFSVLNVANNSNSMLPWYYKVAATWGSHEGSILFWTVTLGWWGAAVAFSARKLPED MVARVTGVMGLVGMGFLLFMLFTSNPFLRIFPAPAEGADLNPLLQDPGMVFHPPLLYLGY VGFSVPFAFAIAALLSGRLDAAWARWMRPWTTAAWILLTLGIALGSYWAYYELGWGGWWF WDPVENSSFMPWLTGTALIHSLAVTEKRGCFRIWTVLLAIITFSLSLLGTFLVRSGVLTS VHAFATDPERGLFILAFLILVIGLSFLLFAWRAPTVGLGGNFALISRESMLLVNNVLLVV AMGAVLLGTLYPLFLDALNAGKISVGPPYFDAVFGPLMLPLVFLMAVGPIARWKEADPMT LVKRLAWCFVVAIAVGIAVPLLMGAWSTWVFTGTTLAVFVMCGIVEEIRGELKFAPAGTG IFGRLTRMTRATWGMHLAHFGVAVFIIGVALVKGYQAERDVRMFESDVVHVAGYTFTFNG VSSARGANFTADRGDFTLSKDGKELQHLYPEKRKYFSSNSMPMTEAAIRHSITGDVYVSL GVPSSDGGWVVRVYSKPFVTWIWFGCIIMSVGGLLAMLDRRYRRRREKKAADAAKSNSAG AAPAV >gi|319805383|gb|ADMF01000010.1| GENE 35 36637 - 37176 768 179 aa, chain + ## HITS:1 COG:PA1481 KEGG:ns NR:ns ## COG: PA1481 COG0526 # Protein_GI_number: 15596678 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Pseudomonas aeruginosa # 1 175 1 173 180 151 42.0 5e-37 MMKAKFLIPFAIFVVLAGFLFKGLYLDPRALPSVLINKPLPTFELPTLFDPTQKFSTEEM KGKVWMLNVWASWCLPCKEEHPYLVGLKRSGLKTPIVGFLYKDTVGAGRQVLEDTGNPYD VVIFEEKNKVGIDLGVTGVPETFIIDKKGVIRAKVSYPILDDLWNIQVKPLIEILEKGK >gi|319805383|gb|ADMF01000010.1| GENE 36 37173 - 37673 632 166 aa, chain + ## HITS:1 COG:BMEI1331 KEGG:ns NR:ns ## COG: BMEI1331 COG3088 # Protein_GI_number: 17987614 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Uncharacterized protein involved in biosynthesis of c-type cytochromes # Organism: Brucella melitensis # 11 164 9 158 158 116 44.0 2e-26 MIKRFILAAAALGAAALLALPLAQTAQAAPREAAPTAFDPVAHKRVVEVSEQLRCLVCQN QSIAESNAELAVDLRNQVIEQVKAGKTNQEIVDYMVDRYGDFVLYKPPFKLSTAILWLGP LCLFLIGIGAFYINLRRRKRLVAESVKPLTAQEKAMADDLLSGRKE >gi|319805383|gb|ADMF01000010.1| GENE 37 37680 - 39002 1404 440 aa, chain + ## HITS:1 COG:PA1483 KEGG:ns NR:ns ## COG: PA1483 COG4235 # Protein_GI_number: 15596680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Pseudomonas aeruginosa # 26 408 26 371 407 124 27.0 3e-28 MTIFIILCVLMCVAAVAAVCLPLWFGSRAKAESDRRSQVLAILQQQANDLEAERAAGRID QDEYEETRSELERRVLEEAKHEEEIKSGRSMMMPRVLAVVLLVVIPASAAVAYYALGRYT AMDPAFIEMMERQSANSRGHSQRDMQKMLDDLKARLAEDPRNAQGWFLLARTAASMNRFD DAVEAFKKLNALVPNNADIMADMADMMAAANGKVITPEVEKLLQDALKVDPNQWKALALL AMQSWDRERYAQAAQYWERLLKVVPPDFPDRDQIASNINEAKRLGGVNDSISAVSPNAGG AGGKSAAAPSSTAVEPVPTASPATMSAVAGTVTLDAALKDQTSPDDTVFIYARPASGSRM PVAFTKVKVKDLPYNFELNETMRMAMGAETLANTKIVVVGARISKTGNFMPQPGDLEGEM DQPVEVGDRGLIVTIRKVRQ >gi|319805383|gb|ADMF01000010.1| GENE 38 39182 - 39961 348 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 230 1 239 245 138 36 1e-31 MLVLENIAKRYGDKSILSEISLAIPKGSIVSILGPSGCGKTTLLNLILGLVPATSGRILV DGENVTNVPMEKRGFNIVFQDYALFPNLNAEENIVYGLKNCPGRSTPEEVRDLIHLLGLE PHLKSRVQELSGGQKQRVALARTLVMKPRLLLLDEPLSALDGLIKESIKERIRTIARQLK LTTLIVTHDPEEALTLSDKVLIINGGRIAQFDTPQGIVHRPADDFVRRFILSQLTIKRDN IYRLFGQPAAEQSLMPAAS >gi|319805383|gb|ADMF01000010.1| GENE 39 39975 - 41684 1659 569 aa, chain + ## HITS:1 COG:SMb21542 KEGG:ns NR:ns ## COG: SMb21542 COG1178 # Protein_GI_number: 16264731 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Sinorhizobium meliloti # 65 550 165 652 680 184 28.0 4e-46 MTTASSGSTLLAGVSAFLTGAGTDERRHYRVLYGAVMIFFALFLGVPLALIFGQSILEKG TLTAANWLSVVMRPGFWSMMANSFAVSTAAAAVATLLGFFAAYGLVISQLPAWVKKAVRI LMLLPLFLPSITYGFAVIYSFGRMGLISQFFGPPPFSIYGFWGLLIADVAYLLPPVFLII SNAFIYVDPRYAIVSRVMGDGFLRRFWTSALRPVAGACVSAFMLGFFLAFTDFGIPISIA GQYEVVATELYSTMMGAVPDFGRGAVVAISMMVPAVGAVALLRWSEKLNFRSTDIVRPML MPSAARDGTFLLFYAGLAAVLLCIFAVMFIVPFVENWPYKPNFTIQHFIDILGEDDIGGI YLRSIGVAAASAAIGTFISFAAALIQARSKLPRVCRSAMDGLAMMTSTLPGMVIGVGFLF AFSGTILQNTIAILILANLVHFFASPYLMGTAALSRMNAGWETTGLLMGDTWIQTIRRVV LPNARATLIEMFELYFINSMVTISAVVFLCGTSTMLLTTKIKEFSYYERFDAIFVLSLLV FVTNVAAKLILDKLAECSRTDQKAGSTRS >gi|319805383|gb|ADMF01000010.1| GENE 40 41783 - 42784 1411 333 aa, chain + ## HITS:1 COG:VCA0603 KEGG:ns NR:ns ## COG: VCA0603 COG1840 # Protein_GI_number: 15601361 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Vibrio cholerae # 30 308 22 302 339 81 27.0 2e-15 MKQMFTLAAAAAAVSLLAGCNGEKPAEQKAAPAAEAAAVIIYSNADEEAQKAMKNALDAN GMKGLYKIQGLGTSELGGKLAAEGKNIEADVVTTASYYLDSLQKSQKLFQKLAFTPDTIN PTPDYYAPILGNCGALFINTQVLAADKLPRPTRIEDLAQPIYAGHISVPDILGSSTSWLM TQAVIADKGEAEGAKILQAIEKNAGAHLTKSGSAPLKLIRAGEVAVGFGLRHQAVADKAK GLPVDFIDPVEGNFMLTEAAAVVDKGDKTNPNAQKVVEVIIKNARPELLQYYPVALYKGE TVSAENKPANPKQFPEALTVELLQKHQKLVKGE >gi|319805383|gb|ADMF01000010.1| GENE 41 42963 - 44081 1151 372 aa, chain + ## HITS:1 COG:STM0431 KEGG:ns NR:ns ## COG: STM0431 COG0075 # Protein_GI_number: 16763811 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Salmonella typhimurium LT2 # 12 366 6 360 367 363 51.0 1e-100 MQMPNIADPNTYKLLTPGPLTTTLAVREAMLVDRCTWDDDYKAMTESIRASLLELAEANP AEYGVVLMQGSGTFGVESVLSSVPGAADRVLVLVNGAYSERMCQILTYHRIPFDRIDCGW DETPDVQRVAEWLDAHPETTMVSMVHSETTTGILNDIESVARVVKAKNRLFIVDAMSSFG GVEIPVETLGIDFLVSSANKCIQGVPGFSFIIARKSALLAAKGNARSLSLDLTAQYETLE KDHGKWRFTSPTHVVAAFAQALRELKAEGGIAARHARYAAVNEALREGMAELGFKAYVAA DRQGPFITTFLYPDQAGFDFKHMYAVLKAGGYVIYPGKLTERPSFRLGNIGEIHGDDVPK ILGLFRGYLASL >gi|319805383|gb|ADMF01000010.1| GENE 42 44105 - 44902 757 265 aa, chain + ## HITS:1 COG:VCA0606 KEGG:ns NR:ns ## COG: VCA0606 COG0637 # Protein_GI_number: 15601364 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Vibrio cholerae # 1 262 2 264 271 195 40.0 7e-50 MKHTIQGVIFDWAGTTVDFGCFAPVSAFVEAFRKAGIDVTLEETRAPMGKLKIEHIRTML AMPAVKARWTERWGRSPEESDAQSIYHDFEPALFAVLDRHCELKDGVLDCVKELRSRGLK IGSTTGYTREMMNVVEEAARQAGYAPDCLVTADETGGFGRPWPYMIFENMRLLKLPAVRT VVKIGDTVSDIEEARAAGVWAVGVVDGSSVMGLSHAEFSALTDAEKAAARIRARSVLLAA GADFVIESLSELPGLIDGINARQGR >gi|319805383|gb|ADMF01000010.1| GENE 43 45041 - 46108 1271 355 aa, chain - ## HITS:1 COG:mlr7180 KEGG:ns NR:ns ## COG: mlr7180 COG0667 # Protein_GI_number: 13475981 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 9 348 7 346 351 284 43.0 2e-76 MTPSIARTQLTADYSIPKIINGGWQLATGHALAHALDMKDAHNAFAELLDRGFDTFDCAD IYTGVEAFYGQIIAERRRAGLSLPQIHTKFVPDLKDLAHVDRAYVERVIERSLSRLGVER LDMVQFHWWDYDVPGMIDTAGELMRLQEKGLIRCISTTNFNTANLKKLVDAGIPVVTNQC QYSLLDRRPEKAMTDFCRRSGVKLIAYGTVAGGFLSDKWLGKPEPDLQSLENRSLVKYLL VIEDTLGWAGYQKLLERLAALGKSTGLSIAGLSSLYTIGKPEAAAAVVGTRNSRHVADTC RLIGKTFPEDARREMDEFLKLFPQIEGDCFDIERQPGSRHIAIMRMNLVDSTTGK >gi|319805383|gb|ADMF01000010.1| GENE 44 46139 - 46528 340 129 aa, chain - ## HITS:1 COG:no KEGG:mlr7179 NR:ns ## KEGG: mlr7179 # Name: not_defined # Def: hypothetical protein # Organism: M.loti # Pathway: not_defined # 18 127 4 116 117 107 55.0 9e-23 MTDPLNSRPEASSELEPDEFELFDLTVTVEGGSFVCRHHLGQGFKVEGEDLVFPEGGRFS LYAMAALLPLIPAKQRPTAAADWMTTDALIACPDPNCGARFRISRTGLRRFRHGECTVVP LPAKTGKHP >gi|319805383|gb|ADMF01000010.1| GENE 45 46586 - 48022 1678 478 aa, chain - ## HITS:1 COG:YPO0624 KEGG:ns NR:ns ## COG: YPO0624 COG1757 # Protein_GI_number: 16120950 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Yersinia pestis # 14 465 1 467 483 216 35.0 7e-56 MTSPAPACASDASLDENRIPFFFGPASLLIPFLIFALLSVYLFVVLKVFDLMALAGAGLT ALVAGALLTKKPMRYWKAVLEGAASPMTATVLLLLMAAGVFSAMMKAAGLAEALAAFTGG AIAGTPLLTPAVFLISSLLATATGSSISTILAASPIFLPFGAALGCDVPLMAGAILSGAI FGDNLAPVSDVAIISAMTQTDKFGKPLDLGRVVKTRFPFAVIALIIALPFYALGGSASEP SAALNAAADPMRLLMLIPVVLLIYIAIKMRDALHAVTMATVAGLIIGLLTGVIEPSQIVR VENGSISGILTGGIANVSGIMLMCLALFGFTGVIEHAGLADATAKFLTNENQSPRRAEVT LAVATVFISTCLAAVTSVAVALAGQLADRLLRRSIDPYRRAYLLAGFANSIPVILPFSAF SLITLSAASALGDPALTPFSLMTATFYPIALFVVFSVSIATGIGRPKISGEPQSSDKA >gi|319805383|gb|ADMF01000010.1| GENE 46 48981 - 49772 1042 263 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0983 NR:ns ## KEGG: Vpar_0983 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 252 1 252 267 265 59.0 1e-69 MDLIRNFKIHAAALIIIVLAELVGVQKFGLVVLLPLLYALVFGALVSFPRWSVVRLDEMN RAGKMLSVGVLLLITKIALDIGPNIEMIMQSGWALIMQEFGHFFGTLIFGLPVALLVGMK REAIGACYSIDREPNVAIISERFGLDSPEGHGVMGMYVCGTVFGALWVSVLAGVIAQMGF FHPHALAMGAGIGSASMMAAATSSIIVVHPEWEETVRAYAAAANLLTSVIGIYFALFVSL PVTIKVYEFFTGDKGSAKPKAND >gi|319805383|gb|ADMF01000010.1| GENE 47 49823 - 50296 719 157 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0982 NR:ns ## KEGG: Vpar_0982 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 38 156 34 152 153 143 62.0 2e-33 MEIRKLMEEMKDVLFILLVTAFFTWIANCIQLPKVNMAESSIGVLLLVVITAFGILVSHL PGFRILPMVFWVSIIAVVISLPGFPGGDWVIHYTKQVGFLPITTPVLAYCGLSLGKDIDA FKRLSWRIVPVALAVGAGSFICATVLAEIILHLEGIF >gi|319805383|gb|ADMF01000010.1| GENE 48 50506 - 51822 1716 438 aa, chain + ## HITS:1 COG:MT3405 KEGG:ns NR:ns ## COG: MT3405 COG1473 # Protein_GI_number: 15842897 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 9 414 9 384 394 142 30.0 9e-34 MNKEELKARVCEVIRRRNPDIVRLGHAIFAEPELGFKEQKTSAKVRAAFDALGLDYETGW GITGVKARLAGKGHRRTVAVLGELDAIVCRNHPHSDPATGAAHCCGHNVQIGNLLAVAYA MKESGVMDYLGGDLVFFAVPAEEYVEIDYRSGLRREGKLQFLGGKQQLIAEGAFDDIDMA MMMHVNATTNPEGEFTVGASSNGFVGKLIEYHGRAAHAAGAPDRGINALNAAMMGVMGVN ALRETFREDDCVRFHPIINSGGDLVNVIPDYVKMESYTRAANVEALARYNRDINRALNAG AMALNAKCDITDLPGYLPLKPDENFRTLLRENANQIFGAANVEEGVHSAGSTDMGDVSHL MPCVHPWVGCVTGTLHGADYVVSDEETAYVKTPEVLAMTLIDLLYDDAKEADRICREFKP VFTKETYLQFMDDLVRQH >gi|319805383|gb|ADMF01000010.1| GENE 49 52066 - 52332 81 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSEAPVKARRNGTAPQAGSAEDADHQADALKGKRAARKALTKADGKDPVGINSPLTGGR LVSVTQSEANPGGSGSSKNPRGEQALSA >gi|319805383|gb|ADMF01000010.1| GENE 50 52410 - 53174 960 254 aa, chain + ## HITS:1 COG:sll1270_1 KEGG:ns NR:ns ## COG: sll1270_1 COG0834 # Protein_GI_number: 16330176 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Synechocystis # 28 252 42 267 275 149 37.0 4e-36 MAMFKKIAAAAAAAAVVFSFSAAADAAQTLRVGSLTVYAPFEYVNSQNGEYEGFDMDLIR EIGRRKGFDVQIISMTLDGLVPALVSGNIDAAVSALTITPERAEKVDFTKPYLNAGLTVM TTKENAPKIKSVKDLENKLLCAEIGSSGALVMKRIPGTTVRTFNSAADAFLELNKGGCFA MLNDGPVNKYFLTQKASKSMNLTALDFVVSDDFYGMAVQKGNKKLLKELDDALDEMRADG TFQKIYDKWFGDVK >gi|319805383|gb|ADMF01000010.1| GENE 51 53326 - 55278 1137 650 aa, chain - ## HITS:1 COG:no KEGG:Acfer_1439 NR:ns ## KEGG: Acfer_1439 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 112 588 87 534 602 144 24.0 1e-32 MNDAIHSSAAAVSDDSHSISRIAANRLRLVPLSWKGETVELTLQSAPVHLCADTLVRTLP TVFADRPYRIECEGAMLKRLAAVTIELNDDVVLCSSTSRNGLQFFAQPTDPNLFADVFGL ARLSVSLRRPDALVPELFYAPPVHVLLPKGERAEAISKMAVRVASASDRLFPKEHSHDRM KEDCGESSSEKAIRNQEEALERIIQLYEQHFSYFRTNARSRLSEREEVGAFAKLKSFTQK TLEFIVRHPEELEPAPGGIGIRPNGIGPAWLPRRSLIRSAQPSFNTYENQALVGFLTSLA HEIDTESAELTAAAEQLPHTQFNVPEGYVPSIAAIFAESAKRLQLAASRFLQFRERLTQL RELYVRTLGIEGEMHPWPLRPTPVFLAITPYREIFEAVSNWRKAPPPGLEEGEMLLTCMA NSRLYEYYVLTALLDAFSANGFLQTAASRYDYQGAQGLTTGSDERPHANTFTFEKDGIEL TLWYQPVVSGGMYAGENGLGLARTSDWSLMQNSDSPNTLRTADKPFYTPDFILRAALKHD ADSADHSRAVYFVADAKFSRMQTVIASQTMSLVFRYLFSIRPIRPQDQHAGLWIFCGSDL HGDALASPLTAMGASLHGPAFVVERLDPEMETQALVRTALQTAQALAASP >gi|319805383|gb|ADMF01000010.1| GENE 52 55324 - 60324 4000 1666 aa, chain - ## HITS:1 COG:PH0873 KEGG:ns NR:ns ## COG: PH0873 COG1401 # Protein_GI_number: 14590732 # Func_class: V Defense mechanisms # Function: GTPase subunit of restriction endonuclease # Organism: Pyrococcus horikoshii # 1371 1519 433 590 788 81 30.0 1e-14 MLYRRIFDYLIDNASSDAEKRLLNTLKKPALRNQRYFADLDLTSARYNSTLKRRLLQFSA DFRFHSEFQFCLIQLWEPRLFDIFPDIRGWSTLTPTDGKEEQLIEFRDSLIAYAKTCPSK TMAASILAAGWMCGMFAPVSNEVTDFGRALIAALRTKYDVPADEDCQADERTPDANADPE EQTPASAPPKEAPAAQPAPTSRTADGQRNSSAPVELTVWDPATAAGPVLKPILFDELLKS FSGKAEKRVAAVLKTPQPAEALALGAPIGKLRTREDLKIALLAAEEKTPAFFEQAMLAVS CGPLHTKIAQNVAHFHAADADEEREAALLALAELAKDISKSRVPELLAGIWRCGLFSPDG RLTLFGRRTYQHFLHLGFLDFDLSALYPDLLLSNEAGDLTKRPDTADSAEKSEAAAPESD SAQPDLAQADEKERSEAPQPYGTLAVRQLLLRWIIEHIDSDAESRIIGLLKSKTLRGSPI TRGVRITRVRGNNALMKRILSADRSDPGLLSVLRLAIGEKMFERCSALYPSFAQGRFLDR NKEGRRPYLSELKNYIDYAGTVQPAEAASFLAGVWPCGLFQDDGDSPADADALSLAGQLI LKKMDDAGIVPLSDMIRHAEDAAARAREAEARAAERAEALRREQEMAEAVRSAQRRQAET AAAALAAAAEDDETVQEAAPAHPVEKRGAQKKTGAVLPAQRAKLKSDPNTADALSTEASV TAPTPAADNVLPAAEPASAAQSAVSGSKPTGELAGQHPEPVQSPAPLKAPLRNPDREPTP GCERWLGFVHRTGTFVNFFCFAVWNPFEERFEAASEESLRTRFPSLGAVNLKGVSTGAVN DGSIYAADIDFSADLKINLDVGTGAPRPDFKYRIDFDKLTRQGRMRRASDIGIYRIVFPE SAEVDFSKTIPVRLSLDPAVEPPKGTKAAKNNKVWQSMGISSVPVLLAYQGRFLGPWTLK EDAGHHPYLAAPEGLADGLAPGLEADGTAPDLLETHESYRAVDQIVVGQSAVLDTEGLKA GRFDILSDRALLAKAAQAAQRALSASAAPHSSGTDAGRRQIESWLAAEHSANELFPDVAE VSERRRARLEKLLEASGRSSLFTREIADLARISMGAQALEKGPLFEAVLERIFSDAKTLK QLGASSAFVSILEKKERQVDQLAQRIEAERIRAQAELSAAEAEKTAALQALQDEQAKLAA QRKHTAAEFAALADLEAVNAKRQTLAQDAEALQSRIEDLTHSAEDLESRVSEAAQRAQNY IFDGRAAAKFMEAAADFRREETEKSVVIRAEAIRRLKTSALSGAELADYLVRGVSAVRSY SANDILNLFLSLTQNFLTVFSGPPGSGKTSICSILAHVLGLDLVSEALGRQSPESLALWP SPEFADRYLPISVERGWTSKRDFVGYWNPLTKTFESVDDRRRDAFQALDAEARLGAPKLP AVMLLDEANLSPMEYYWADFMNVCDDASGHASISLGDHRRLKISPALRFLATINNDHTTE TLSPRLVDRAAVITLPAADRAALIRTARSFTPQIISWAALSSLFSAGTTPLTGAAGEGLE ELISLTAAAGTPMSIRVQLAFEKAVLGGLPVFREDPKLEQSAADAALDCAAASRLLPHLS GNGPDYRSALVNLLDAAHRRRLVRTAGLLETMISRGDRALGYFSFL >gi|319805383|gb|ADMF01000010.1| GENE 53 60460 - 61329 472 289 aa, chain - ## HITS:1 COG:SP1044 KEGG:ns NR:ns ## COG: SP1044 COG1397 # Protein_GI_number: 15900915 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Streptococcus pneumoniae TIGR4 # 2 277 1 279 284 166 34.0 5e-41 MLYGAVIGDVLGSTFEFNNWLKSPEELPIFPPDAHPTDDSVLTCAVADALIASAVRDDVS ENTLRVDPVQFQRKVRGALRDWGCTFPKAGYGSRFMRWMLSDTEAPTGSLGNGSAMRASG CAWAAGSLSEALELAALSALPTHNHPEGVAGAQAAVWLIYRLREGADPENLRREWNGLWG QPLGELPQLTVLEASRPIRTDLRCSATLPVAAALVLGSSSYEETVRRAVALGGDCDTIAA IAGAAAEAAWGVPEDLRAKVDALLPIRLIELIRRFESVFAVSAPKRMPA >gi|319805383|gb|ADMF01000010.1| GENE 54 61514 - 62377 604 287 aa, chain + ## HITS:1 COG:SP0722 KEGG:ns NR:ns ## COG: SP0722 COG0819 # Protein_GI_number: 15900619 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Streptococcus pneumoniae TIGR4 # 54 281 7 219 230 84 25.0 2e-16 MNINKDASVCRTRRQMLIRTASVVFSTGSLAFLPKSVWASGAPQAASEGWSGQAVKAAEK ILEACCRHPFTQGLADGTLPKKAFLFYVVQNVHYLTGYAASLHALAGRVATMSNLPLEER KRIAKRLHGWAKDTDAVRESLDSVYAAHAAGKRLTDDPLFKTIEPATLLYINYEALCAKT SHPAVGMAALLPCFWVYDGLGQAFVKAQKKSRLNKNPFADWIAGYGSPEYSAEVRQALGI ADALAAETDETVKAEMTSAFLTACRMELHLMEAAWRGLTWEPVARPH >gi|319805383|gb|ADMF01000010.1| GENE 55 62650 - 63282 360 210 aa, chain - ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 2 191 13 202 227 120 37.0 2e-27 MLVIGMEFATFGISLTAVSNIGTTPISTLPYVLSKIFPLSFGTTTFILNVIFVVLQALLL RSRFSILNLLQIPAVLVFSAFIDLNMHLLQPYSPNNWWLSAALSMFGNLVLAVGIILQVR SKTIVQPGEGIVLAFAAVFHRPFGTVKIINDTVLVVIAAILSFAVLGSFVGLREGTAVSA VLVGFLVKAITAFFPDQRSEKPHQVNIRHE >gi|319805383|gb|ADMF01000010.1| GENE 56 63559 - 65313 1907 584 aa, chain - ## HITS:1 COG:STM1094 KEGG:ns NR:ns ## COG: STM1094 COG4690 # Protein_GI_number: 16764452 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Salmonella typhimurium LT2 # 2 289 20 303 489 84 26.0 7e-16 MCTTVIVGRLASTTGRVILGHNEDSGGRCMHQQFWVPGGSHSAGEFVEGEPGRARVPQAP VTLGTYWSNMLAPAPGSSFDQGMANDAGVVMCSNSGGDSYDGHLSDEEVGLFEGGIGFLL RRCVMERAHTAREAVEIAGELISKYGYWSPARNYSFADTQEAWVLNVVKGKHFVAHRVPD DKVVLISNYLAVRVVDFSDTENVIASPDLIDYAVKKGRFSPAAGSYYHEFDFSVAYQPDE IRLDPNKSIRMRTGWQYITGEVFDDPNHYPEMVEPAHKMSVEDVKAVLRLTAEETYRTRG DGRADAFHASAQDISRSHTRESWVADIADDPLYTVLWRCSSSQDPNPYVPWFPMAGEIPQ GYQWSTLEDARRFHFSMPADMLDFNEDHSWFIYGSLSEIVNFNRGLMAGIWPVRDSLEAE FIGAAEKVKHEAEALPHAEAKKLLGDFTCRMCAKADETYRELRDALTIDAADVVLADAEA VEISVSDPNALVAITLTPAVESSELDLDPNSVLWSLGFSGKKESVLAPAKPISSAKNDDG SWTLSFRANEVARWAVPGCFMDTYIRGFVGHRRFVSQVNFRFTA >gi|319805383|gb|ADMF01000010.1| GENE 57 65528 - 66445 1059 305 aa, chain - ## HITS:1 COG:RSc2225 KEGG:ns NR:ns ## COG: RSc2225 COG0697 # Protein_GI_number: 17546944 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 3 302 18 315 324 157 35.0 3e-38 MLKQSLWALAAALFFSMMAACVKLTNGELTTLEMVFYRSLFGVITIGLFVKRNHLSLKTP HLMGNITRSILGTLSISVWFFTLGQLPFGTNMTLVYTTPLFMSVNFIILALLRHQRAPWG LAAAIIAGFSGITIILQPSFSSDQLWPALLTLSVALLDLAIYWQMKELGRLQEPSWRIVF YFTCFGTCFGLIGAYLLEDGLHMPSPEAALAVLAMGAFATLGQIATTRSYAYGNMLLSSC LGFSAIPFAAIISWLLFDEPSTLMSICGMLLITTAGIGATIITKRAEARGIAPVEGKVAA EGSKE >gi|319805383|gb|ADMF01000010.1| GENE 58 66580 - 67548 1026 322 aa, chain - ## HITS:1 COG:NMA1464 KEGG:ns NR:ns ## COG: NMA1464 COG0354 # Protein_GI_number: 15794366 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Neisseria meningitidis Z2491 # 18 316 7 286 288 133 33.0 4e-31 MEQTTTSLAVPPSIACAPNTALIRVTGEDARHFLHGQFTQKIENLAGRTTLAGYCSPKGR LLAVMRAWLSGDAVMLALPAEMAEGFLKRLHMYVLRSKVSFEVVDPAPAMLIAVGEEGAK TLAALGLEMPAHGVCIEKDGFTLLGIEPSQTVPGFCAGGARALVILPAGKTAADFGLTPA PAAWALASSISAGIPQVLPPTRETFVPQAVNLELVDGVSFSKGCYPGQEVVSRLQHLGET NRRAAVGILSAEAAAPAGAPVYAKGEEAGKVVRAVTLGGRTLVLFSATIGSLFAGITLTP DGQPLDLVELPYRYRNVLKTSA >gi|319805383|gb|ADMF01000010.1| GENE 59 67781 - 69124 1007 447 aa, chain + ## HITS:1 COG:RSc1783 KEGG:ns NR:ns ## COG: RSc1783 COG1559 # Protein_GI_number: 17546502 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Ralstonia solanacearum # 108 421 74 377 377 218 41.0 2e-56 MKNIETPSNAASDEAPLEKPDEAPGLETVSESEASAVKKSEEECSQTGAQHSAENSAGEP TDSSEKTVHSAHKPHWGRRLLMLVLLVMLLAAGAAAAWQQVRAMLYEKPAVMTSDMVVVP VLEGDSVTRVLGRLAQAGVEVPIWQAKLLTRLEPTLVRKIHVGRFRFTRGMTPYNVLETL SGPALVDKQLRIPEGAALWTVEDILASAEDLSPESAKLTDDALLERLGVKSMEGASDTAT LEGFLAPDTYRYGSGTSDLIVLEQAAARQRRLVDEAWATRSELCEAKTPYELLILASIIE KETGVKSDRHLVSSVFNNRLRIGMPLQTDPTVIYGLGPMFSGNLTKKDLQRPGDWNTYLN KGLPPTPISMPSAASIEAAAHPEPSKYLYFVSRGDGTSEFSTNLRDHNRAVNRFILKRGA PAKSVQTDKPASAAKAPQNASKPASVE >gi|319805383|gb|ADMF01000010.1| GENE 60 69190 - 69801 666 203 aa, chain + ## HITS:1 COG:RSc1784 KEGG:ns NR:ns ## COG: RSc1784 COG0125 # Protein_GI_number: 17546503 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Ralstonia solanacearum # 1 201 1 204 205 188 53.0 5e-48 MLGRFITIEGIDGAGKSTQTESLLKHLADQGVSVLHTREPGGTPLAEKIRAMLLADEMAP DAETLLFFAARADHVRRVIRPTLESGRWVLSDRFTDATYAYQVGGKGFSGEKVEALENWT LGGFAPDLTLLFDIAPAVAAARLRARAGDQDRFERMGEAFFTRVREAYLARAAAAPERFL IIDADRPAKDVSADIFARISSWL >gi|319805383|gb|ADMF01000010.1| GENE 61 69792 - 70826 971 344 aa, chain + ## HITS:1 COG:RSc1785 KEGG:ns NR:ns ## COG: RSc1785 COG0470 # Protein_GI_number: 17546504 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Ralstonia solanacearum # 6 343 4 333 336 176 34.0 8e-44 MALAPYPWLEEPAQTLLAMRDRMPNAVLLYGAPGAGLYELALAFSKSLFCLSPHSDGTPC GHCTGCRLAQAGTHPDFKQVLSEAQCARYDVAYEPAENERSDAKKKLSREIRIHQIRVLG DFLSLNANQGGRRVVLVHPADKLRAEAAASLLKSMEEPPEGLIWVLTAEKLDDVLPTIRS RSRLVRVPMPDHEAALAFLKSKKLKKPEEALAMAGGSPLAALEPSADDRLSAKTENAVLE FLRAGPELSVDALVRLYAPDLTLPAFSLLVSRWAHDLMRSALGLQPRYFIDENAVIERLA AHTDAKRAAGFCTQALSCRRAADHTLNPKQTVESVLLRYKQIFQ >gi|319805383|gb|ADMF01000010.1| GENE 62 71026 - 72555 1330 509 aa, chain - ## HITS:1 COG:RSp0902 KEGG:ns NR:ns ## COG: RSp0902 COG0582 # Protein_GI_number: 17549123 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 101 498 173 554 566 145 30.0 2e-34 MAKLPSLPERTLSPDDRLARLLPPAVALPMAAAGIETVEDLYECAAALGNTWFRRIEGLD AALAGELMMWLARWGKSVGEVTPRFFPPGSLPAVRTSASRRQTDASRGLSAPGDPRIRPI EQIELPEPLSGKKGLNRAPAAACALSARDDLEAIRTWLNARAGNPNTHASYRKEAERFLL WSLVEKETALSDIRADEASQYLRWLEDLGRTDDKTFSRKWRIPQAFWIGEKNAERSSAAW RPYNGPLSPASRRNAIVVVRQLFNFLKRTGYLIFNPFDQVSPKVPLLKGEGAPQAFADRS LTPEQWSEITGHLSLIPEGLPRERMKLILMLGKSLGLRASEMLEARTGWIVRRSFGGGER PAIEVIGKGSKVRRLPLTAEQLSIINQALAARGIPEAAQTPPDTPLLVNLGRGRNPGGPM SRSGLYRVLESFFDRVADEVALSAPLDAAKLRASSTHWLRHTFAVSALKEMSVNVVQAAM GHASVATTGRYLSPEEAEMSEAMSHMKAL >gi|319805383|gb|ADMF01000010.1| GENE 63 72726 - 74873 1609 715 aa, chain + ## HITS:1 COG:mlr7238 KEGG:ns NR:ns ## COG: mlr7238 COG4191 # Protein_GI_number: 13476030 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating C4-dicarboxylate transport system # Organism: Mesorhizobium loti # 402 657 340 600 601 107 32.0 9e-23 MTKIRRFPFFSAAAVLALTVPLSALADYPDLPPEPPRAASSFIGMGAATGTPSGDVAQAV KPVLRSLPVPTMVQSAPFNKSDLYAVPVTTNFPRPLKIGVQASLGLSSRAQWLRFTLEEL KYVLGEANLEILWFDNRQLELGVKSRQLDFILADADEFALAQSTGYYEASASFLPNAAIR AEDAQAAVIFTRRGRESTAFSALANPSTTFAATSRDSLAGWDAAVVKLFQHGISRTDIED RTTFYGWSSSSVLHAVLSGTQTVGILPACELEMLENRGKVGITHDLSIFSPQRDDTLSCT HSTITYPSITVGVLRTLDPAWKKAVSTVLYAAASQRYGGEWALPAVNRTIYDMFYELKRG PYENLGSWNLNRFLRENAEFIAFALLAAFIIISYAVSLSVLVKRKTAQLRRALEEREMIE AEAVQSRQHIANLERTGIVGQMSTIIAHELKQPLAAIVNFAGSLNRRVQKGNYDEKAFGW ALGEILDQAERANQIVNRVRAYAKHDYPPRTIVDLYGVIGNAITNFRRARQTAAEVIVRV NKHSMAEVDAWEIELAVLNLMKNAADAISGVEHPKIIVSLTPIDEKTWALSVEDNGPYIT DEAFDNLFKPLQTTKGADGMGLGLSIIASIAERHAGRCTVERAGAQGLRFTLVLPRIAGG NEPDLAEDGLPPKMTVYKEGELASARGAADFRIENAKPKTRTATMDPNNTNVSGI >gi|319805383|gb|ADMF01000010.1| GENE 64 75695 - 77671 2449 658 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_3640 NR:ns ## KEGG: NT01EI_3640 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 18 652 1 644 648 830 59.0 0 MTKQHKLLSLAACMSAALVASSAMAAETPAAQTSAKEVLPRTLEGYVSQDKAFWDYLKAN HPYFKYLKEGRVVGKFTMSDREEEWVDFGGGDKYREDTGRTTAVTYRLPYESFLDLPNNF VGPKKCGECHPSQYEKWERSRHNKIVRFPEEMTEAVVQGDLKRPLYGSKASVLPEGINVE DVYVLMGTPRTKYGFVDKWLVRGTYHIEDGGNLSQATGKIVAGGNQFSRNWAEHITPEVA KKINAWDPTFPTKLEDFGAQSSKVWGMNSYGASNRKQAMFQPGSSYCEICHTWKFDFKSQ DELFAALGDGEKLRAHTIAKGVSCEECHGAGAHLYGARGAGMPSDCERCHQRFVYNREDA KANPKAPFTSYFKSFCPACGTEGSQSHYTKHYQKGMRCTTCHDPHEVTSNDWTSQYTVPN LKKNCQDCHTTAAYFFSQGGTHSRNSCESCHMPKMGSCENFAAIQRPDMAGFDNVRASHI WRILVDPEKKSINPPEGADRKLVSPKGWHLTKDEGRPYLDLMWTCGRTAYQDKHVVDAMG CHSPIQSKFPEMMRFKDQKTIYNKVIAWQTPVKEGYAKVIADMANIQDLLKVTNLSTADR AQVQLYAEEARLNAAKIKDDGSWGVHAPKFAKQLVDEATTYTTQALAILNAANKTAKK >gi|319805383|gb|ADMF01000010.1| GENE 65 77912 - 78409 544 165 aa, chain + ## HITS:1 COG:no KEGG:NT01EI_3641 NR:ns ## KEGG: NT01EI_3641 # Name: not_defined # Def: hypothetical protein # Organism: E.ictaluri # Pathway: not_defined # 11 146 8 135 140 95 36.0 8e-19 MQKKSFAAISTALAAALMISTGSPAYAADAADGSKMTVQQMRQPIPLSLNKVSKVLGQPD VYVYDCNPEDIYEKSHLKGSIHANKADWMNLLPKDKKNSFVILYCINRMCTVSFEAALEA IKAGYENVYVMPDGIQGWVSNGYPFEGTSWKPYESKAPVLLQRKD >gi|319805383|gb|ADMF01000010.1| GENE 66 78506 - 78904 403 132 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSNHPALISGGLFFVIGLALAAALFTGLLPHCWHNGPSVCYWMTRAAGGASAVVAFLGL AMMFSRSAGAGFGMAVGVFLNAILIAGVAGPLIGPCPSPMMHCHSITQPVLIVAAAVIAV IALIEIRRLASR >gi|319805383|gb|ADMF01000010.1| GENE 67 78996 - 80252 1003 418 aa, chain + ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 28 418 9 400 401 251 32.0 1e-66 MTNPQPSQNVAGHLAKAAGEYKPLTTFTIAAANVTQRPLRSLLLGLIAAVFTFLLFSSAM VTANLEAGISSLAARMGADVLVVPQGQGKKIQSVILRAEPSTFYLDGKLLDVVQKLPGVA KASGQLFISSLDAQCCSVKVQLIGIDEATDFVIAPWLKHAADKPLSGNDVIVGDYIYGEI GSTLKFFDQEYRIVGRLAPTGMGFDSSIFMTLDAARRAGRAASPDRAGEMAQSLSAILVR VNPGVDPITVSDELLDQLGLKANVNFVFASNMMSDTSAKLQKVVSVMYTAAGGFWAAAAI IMLIVYFFAFSERQREFATLRALGASRGKVVGIVLAEAFIISMLGSAVGIGLAALVVSNF STVIAHAIGLPYLAPETGSWLRALAASVAAGILTVPLASLPTAWRIGRSDIFTTLRED >gi|319805383|gb|ADMF01000010.1| GENE 68 80257 - 80964 277 235 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 3 200 5 199 223 111 34 2e-23 MKLSAKQLGRRYERAGRPFWALRHADLSVGAGDFVTVLGRSGSGKTTLLTLLLGLCMPTE GEVAFNGRALSGMSDEQISALRNAHIGYVPQHAGLVPTLTILDNIRLPWHLANRRGTEPA GRAEELLTAVGLADLGGQYPRALSGGELRRAAFARALMNSPELIVADEPTSNLDRESAEV VMGMLIQARQAGAGVLLVTHDTLGIGASNAIYDMVDGELKLREEAVQSVDPKSNR >gi|319805383|gb|ADMF01000010.1| GENE 69 80995 - 81420 569 141 aa, chain + ## HITS:1 COG:no KEGG:DMR_37430 NR:ns ## KEGG: DMR_37430 # Name: trxA # Def: thioredoxin # Organism: D.magneticus # Pathway: not_defined # 48 139 24 115 117 72 38.0 6e-12 MQRRNLIGKGAALAAFAALPGASLLAAEAAADAPALKKKDKDKDLPFPVKGKVTVVDFGA PWCASCPEMAKLMEEMQKEYGDRAAFIVINIDEWNGIENDYLIEEMPAQIFYDASGEPIW QHRGPVDAETMRERVNILLKG >gi|319805383|gb|ADMF01000010.1| GENE 70 81509 - 82264 555 251 aa, chain - ## HITS:1 COG:AF2097 KEGG:ns NR:ns ## COG: AF2097 COG1641 # Protein_GI_number: 11499680 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Archaeoglobus fulgidus # 44 243 39 234 395 89 32.0 5e-18 MPDSILTIRIHAGFNASSFTAGLLALTEQTSGTAGAYLRSLFPGLDIGLELKPAWVRGIS GWTVKFLTPAETGHGHRHPEEIEAIYAASRLSAGARQRARAVWHELVRAEARVHGTSENE VHFHEVGRLSNILAVGLCAQFLETLELERIAASPIPVSDGEVICAHGTVPYPAPAMFAMM PGVAVRPSSGIGELVTPTGLAMLKGFGAHFGPWPEMQISTAVNVFVPGCTFDNVPNGTRF LLGRPLPQPAE >gi|319805383|gb|ADMF01000010.1| GENE 71 82297 - 82980 644 227 aa, chain - ## HITS:1 COG:CAC0776 KEGG:ns NR:ns ## COG: CAC0776 COG1691 # Protein_GI_number: 15894063 # Func_class: R General function prediction only # Function: NCAIR mutase (PurE)-related proteins # Organism: Clostridium acetobutylicum # 7 213 39 245 248 151 42.0 8e-37 MLDSAVRFDLDRERRIGLPEAVFCAGKPFDTLAGLFARFALRNAPPVLFTRLDAEVFAKI DPDTAGKYNFDPLSRTAWNAVRPRRPGVCAVVSAGSADAPVVMEAARTLEYLGYEVKPFI DCGVAGLWRIEAALPEINACDAVICAAGLDAALASVLGGLTMRPLFAVPTSIGYGIAQGG ETALRSMLASCAPGVAVLNIDNGYGAACAAARVLAALYPQAPSETAG >gi|319805383|gb|ADMF01000010.1| GENE 72 83029 - 83988 575 319 aa, chain - ## HITS:1 COG:AGc3663 KEGG:ns NR:ns ## COG: AGc3663 COG2207 # Protein_GI_number: 15889309 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 52 298 52 297 301 174 39.0 2e-43 MTTIQNMLADMRRELMSTNPPLGVSTTPAEGFRTHRFESEVPLSCSTGAIAVSFILSGVK TVTVGGRFISYGAGEGLLSGAALPSTFRAMHASPEEPFLSVSLALDRATLIELAEHLPQT DQKENAELPPEAIFVFEPTEDLLFDFERLIKLLKTPELAPLRAPCIIRDIHSLLLAGPTA ARLLPLLRESAPANTVIRAIGWLRRNFDKPISIEALAKLHGMSTSNFHRQFKAVAGMSPL QFQKQIRLCEAQHLMLAERAQVSAAAYAVGYESPTQFVRDYKRLFGDSPLRDVRKRRDFG RTAESIKLVGVEHGTRTAA >gi|319805383|gb|ADMF01000010.1| GENE 73 84542 - 86596 1661 684 aa, chain + ## HITS:1 COG:aq_2064 KEGG:ns NR:ns ## COG: aq_2064 COG0493 # Protein_GI_number: 15607032 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Aquifex aeolicus # 129 589 10 472 476 244 34.0 6e-64 MQAAFSYGHWQGRRLDNRSAVDSCDLPVGFPLEEAAAFNRGNPLTSVIGPQGFLVFENAP HLTVILYAYYEDARSFSCGRCTPCRMGTVLIAEALKNALEGRGSTVDWDEIAETARHMKV SSLCGIGLQSAEPILGAIENFRTELETTEPVAGLQGLKDAKQYVSTATAPCIEACPAHVN VPRYIDDIRDGRPEMAEGVLLKRYPLVGTCGRVCVRPCEAACARRFNEQPIAIRDLKRHA ADELGVGSAELFDDAMLKHPAPGVDPNQRIAVIGAGPAGIVCAYHLLRLGRPVDVFEMEQ EAGGMARWGIPSYRLPRAELAGETDIVKTLGGHYRYGVKLGRDFHLNDLFAQGYDAVFLG IGCARGQFLGLPDEDQNAQGYLRGLDFLLEVEHSQGTPEGPKPLEGDVVVIGCGNVAMDC CRTARRIVKPGCQVTVAYRRIEASAPADPEEIHAARAEGIRFEFLSAPKRILVENGRVVG IELVRMHQTEPDASGRRAVKPLPGSEFIIPCSYVIAAIGQKMDPTVFTPEDGIALTRWGT IETKENFTTTREGVFAGGDAATGPKTLILAMAQGEAAAKSIDQYLKTREPAFFPRTRLSQ IIAKAKLVGACRPTRPLPIEARYTSKFLDPEARSANWEEVEGAMTIEEARQESQRCMRCM RLIAVTTRNPVVEHEPTAPNAATF >gi|319805383|gb|ADMF01000010.1| GENE 74 86629 - 88488 1434 619 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 231 603 5 368 372 304 46.0 4e-82 MAYPDKNEMPDLSRRAFINGQTVAFEPNDTILEAARRAGIFIPTLCELAALNHRPGTCRV CLVEVELSQGGREIVTSCETKIEPGMRIRTRTAEVRRRQKMQVELLMADHDENCSSCKRH GKCGLQDAALWTGADRLGLSGRYKPIRKLDMSAPAMRFDGGKCIRCLRCIEVCRQVQGVS ALCLTGTGTKAEIGFTGAVNWGSSDRCIECGQCSLVCPTGAISVRDQGCDVFDMLDDDSI TTVFQFAPALRVALSEEFGLPPGMDVQGKIVSALKRMGADYVMDTNWSADVTIMEEGTEM LANFERAKKAGTLHSKPFTYFTSCCPGWVNYVEKIAPDMIPHVSSTRSPQAIFGALAKTW LVEHAGIEKRDMRVISIMPCTAKKGEANRDTLKRADGSCDVDVVLTIREFARLIKRSGLN LADLPDMPFDSPMMSLSSGAGQLFGSTGGVMEAAVRTMSAVKNQDPRPMPPLTPVRGMEF IKEATVRLGDLGDIRIAVVHECANVAKVIEMVRNGTCPYHFVEVMACPGGCVGGGGTTRG VWGRNTAKRQQGIYAIDKVKKIRASYENPEVIRLYQEYLGSPGSERAHELLHCEYKPWKK RERKLTGPEILESVELSPE >gi|319805383|gb|ADMF01000010.1| GENE 75 88917 - 89201 58 94 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLTAARYWRADPRGVVRLLNQVFISGAVRSFKRKPQLMKWTGNRRHLKQKLCSRCRCLQ NLPQSNDSRMQISTFYCTVSLYMHDFMIISNRYR >gi|319805383|gb|ADMF01000010.1| GENE 76 89218 - 90213 1144 331 aa, chain + ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 2 302 7 305 321 279 50.0 4e-75 MISRFMNKTFALWVVVFGALGFVFPQVFKPVGAYVSILLGVVMFGMGLTLTTADFREIFR RPKDVAVGILAQFLIMPLAAFVLCKAFDLPPDLAVGLMLLGCVPGGTASNVVTFLARGDV ALSVTVTSCTTLLAPVVTPALMYAFASQWLSIDPTAMFMSIVQVILVPIAAGVIVHKIFG AKVERVAAVLPIVSVGAVVVIVAAVVAATRSQILSAGMTAFIVVALQNAFGMALGFAAGK VFGMDLSKCKCLCFEVGMQNSALGVALASVHFAASPMTALPSAVGALWHNITGPVVATFF QKWRAADEKKSILDLMEESIAKAREEKTAAV >gi|319805383|gb|ADMF01000010.1| GENE 77 90491 - 90826 71 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADWGSALLALRLPKCCGLQPGFHQLLGGPFGSAASWQETLEPAAGSSGFDSPTAQASEN FTSVHALAPTASALEQDVFNFFESLSDVFQAVLPETPNAKIVGFAQGRHGV >gi|319805383|gb|ADMF01000010.1| GENE 78 90829 - 91851 1187 340 aa, chain + ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 1 307 1 305 321 282 49.0 7e-76 MNTLLMLSRFANKTFALWVIIAGILGFVFPDVFKPIGSWIAILLGVMMFGMGLTLTTADF REIFRRPKDVFVGILAQFLIMPLAAFALCKAFALPPDLAVGLMLLGCVPGGTASNLVTFL ARGDVALSVTITSCTTLLAPLVTPALMYFFANQWIAINPTAMFLSIVQVILLPIAAGVVV HKLFGKKADQASVVLPFVSVATAVVIIAAVVAATRGQFLSAGLTVFAVVALQNAFGMGLG FLAGRLFGMDVAKCKALCFEVGMQNSALGVTLATVHFAASPMTALPSAVGALWHNVSGAV VASFFQKLRGNGEKKTFFEVLEENAAAKKHAANASHKAAA >gi|319805383|gb|ADMF01000010.1| GENE 79 92423 - 93454 867 343 aa, chain + ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 53 333 53 335 344 158 32.0 2e-38 MQSVPDSQNAGSISHAQCPIGLRRRLIAAAAAVTFSGLAVFGPAFAAAEAPLIGVVQLVD HEALNDSVRGITDGLKARGLAGSLDLQNAHGDQSTLKTIGDRFVHKDAKLIFAVATPAVQ AMARATKTIPIVGAAVTSYTAAKVIASNEHPGGNVTGVSNIGPVAAQLDLFMKLVPNAKR VGTIYNAGEINSVVQIELLRAAAEQRGIELEEATVTNLTDLQSAVVSMSKKVDGFVFPTD NVVVAGMAVVLRTTVPAHQVTVSGDMGSLAAGCTAAMTVDYYKLGLQAAQLGADILEGRT TAAETPIGVQDVKNPTFNVTAMKRLGLEIPEDLKAGALLWQKK >gi|319805383|gb|ADMF01000010.1| GENE 80 93743 - 94729 1166 328 aa, chain + ## HITS:1 COG:HI0505 KEGG:ns NR:ns ## COG: HI0505 COG0524 # Protein_GI_number: 16272449 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Haemophilus influenzae # 6 308 8 294 306 143 35.0 4e-34 MHVLNIGSLNIDNVYQVPHFLRGGETVAAYRRTLHVGGKGLNQSVALARAGIASSHAGII GRDGEVLKNFLEAEGVNVAHVEMRADEASGHTVIQISPEGENAILYYPGTNTCLTREFVK NAVSDLKEGDVLLLQNETNAIRDAIEIGLEKGLRIVFNPAPFDRSVPLLPLNQTAALILN EGEARGLYSMDEAAAENLDDLELLTALGERYPNTTLLITLGARGVAVRIPGQSPKLFPAY RVDAVVDTTAAGDTFTGYAVRALTLAWNAEEKGEDPARCRAILEDGIKYAVTAAALSVTR AGAAESIPHFEVVDAVVADLWDTEGNLR >gi|319805383|gb|ADMF01000010.1| GENE 81 94729 - 95667 857 312 aa, chain + ## HITS:1 COG:PM1767 KEGG:ns NR:ns ## COG: PM1767 COG1957 # Protein_GI_number: 15603632 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Pasteurella multocida # 3 312 1 310 310 318 53.0 7e-87 MTVENILLDCDPGLDDAAAIFLAAGSPRIHVLGITTVAGNQTIERVTKNAFFVAKMAGMG DVPIARGSARPLLRPQVQVCSEIHGETGLGVPVAEPERDPDPRPAAQFIVDVVMREPEKS VTLVATGPLTNVALAARLEPKIVERVKQVVLMGGACHTGNVGPAMEFNIENDPEAAHIVF NEPWQVVMVGLDLTYQARADKSVRDAFKAIGTPAGDFMYQTLETFAENYKAWRGFDAPPL HDPCAMAYVIDPTVMEVVPVPINVETKGALTAGMTVCDFRRRAPEGCHTFAALKLNVPQF WEMLISSVKAIG >gi|319805383|gb|ADMF01000010.1| GENE 82 95851 - 96723 734 290 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302860911|gb|EFL83986.1| ## NR: gi|302860911|gb|EFL83986.1| hypothetical protein HMPREF0189_01349 [Burkholderiales bacterium 1_1_47] # 1 280 1 273 282 145 34.0 4e-33 MRRFSQEWFDALSRCRFAGQWPDWSGPRAAPVMPWITAPIHPYLRKAFDHMGEVRKLNPG DWLYPHVQVRSYMLVEAGLTGRIVATVDGQSGAGAMALSTPMRNAAGNLNWLTHRSAIGR YQALSHVRLREIPHSEALAFLMQADKDFYLALYAQMELINLSDRFGFAILALLPAIDRFK ALLIAWSLFYGEVSEGPRGLRIRVPIPGRKNHIAQVIRTSSVTLDGILRELKTAENWERE GDFVTFNASTLQSVHEWMRHAEGKDAYLARPARVEDMLLAAQAEAAEIIH >gi|319805383|gb|ADMF01000010.1| GENE 83 96919 - 97941 1105 340 aa, chain - ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 4 320 1 317 321 291 50.0 9e-79 MNDMKYLVKVSQFVNKTFALWVIIFGILGFIFPEIFKLVGPYVPVLLGVVMFGMGLTLST ADFREVVRRPKEVLTGVVAQFTIMPLSAYALCVLLNLPADVAVGMMLLGCAPGGTASNVV TFIARGDVALSVTVTSCTTLLAPIVTPALMYVFANQWLAIDPASMFLSIVQMILLPIAAG VVIHKLAGDKNVEKCVAALPIVSVGAIVVIAAAVVAATRAQLLNVGLLIFAAVAVQNAVG MLLGWYAARFMGMSLSKRKTLAFEVGMQNSGLAVALATLHFAAAPATALPAAVAALWHNV ASPAVASWVQKWRDAGEKESFFDRIEREVQESKTAKRSAA >gi|319805383|gb|ADMF01000010.1| GENE 84 98324 - 99031 427 235 aa, chain - ## HITS:1 COG:no KEGG:Smal_3912 NR:ns ## KEGG: Smal_3912 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 77 234 38 178 185 65 37.0 1e-09 MPVRSRRLFLTALFAVSLLSGCALKKAAEGSQTASQKTAKPLQRKPSVNSAKTIERPKPQ KPAAAAKERSFVPVFLPAIADAPQLSLDQQIVIRFSPKAAQHGAPAAVPPLRATVLSAPG SVNAVFSALSMTVWRISWDGSTITEARSPRLDERISAERLLRDLTFTLWPTQSIAAAVPS GFEFSSHRQGPTEIRELSSEGTALLRAHITQMGSRSMITIENEPEGYTLQIESLL >gi|319805383|gb|ADMF01000010.1| GENE 85 99479 - 101908 2013 809 aa, chain - ## HITS:1 COG:RSp0362 KEGG:ns NR:ns ## COG: RSp0362 COG4258 # Protein_GI_number: 17548583 # Func_class: R General function prediction only # Function: Predicted exporter # Organism: Ralstonia solanacearum # 50 804 43 798 805 192 29.0 2e-48 MTVQHRAQKILDGLLSFLEVGRGRLALGCLIVLLALSSWVLCDRFTHRAFDTSLASLIPA ELAPELPEDIEDALRARLSQDEAGNVIVLLRVKGETADSAEKLRQLTETAQAAVRNVLLA SPALSERSPERFGAGAVPKIPHAAGRLLSDADRSALRSLIGLPEPSRSERLTERAVGCLT SAVSLRILGFANDPFCTYDHWLTEELKRLPWRASSSNGRTELELKTVPPGETVRVLFFTA DENLAAAGKAHFAQTLEDAQNAAQDAVGRRASVQIEAAGVPLFTDAIAARAQRELTFIGT LSTISVFALAWALFGSPVVLLLMAGTILLGFTLALGAAFAVFGTLSLITFVFGATLIGVS IDYSSHWFALKTAGESAQARRRRMAGALLSAALSTAAAYCTLALTPLPGLRQMAVLAACG VVGTLFTVLTVLPRLERWVPKDQTRLMRMLAQALPRLPRLDASALRRPAVLFGLAIFAAA LLFGFSRMHFDAGIRDLQGAPPKLLESQLAVSRALALPSPAQAFVLQGPTLSETLEHEEA LLSAMEAIPELKSLTPSGLSMLLPSDAKQDADRDLVAAATAAAAPRLLELLGASPKGPDA QRIALNDLESSPWRELTHRFVLENQPGRAVTVLMLAGVEPKHLPFLTKAAEAVPGAYFVD ITRGMSEGLSLYRDLILMVLAAGIVLLWALLTLRFGRESWRAVLPSALGILAALAVFGWT GTPVTIFTALGLVLVLGLGVDYGIFLTGSPSDGRTSAAVLFSGVTTLLSFGLLFFSATPA LRAFGITVLVGQSIVWAATPLLRPAADKR >gi|319805383|gb|ADMF01000010.1| GENE 86 102054 - 102623 549 189 aa, chain - ## HITS:1 COG:MK1490 KEGG:ns NR:ns ## COG: MK1490 COG0778 # Protein_GI_number: 20094926 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Methanopyrus kandleri AV19 # 6 161 39 205 233 81 38.0 8e-16 MTTKTIELPAPRKLKMTLTEALKARKTIRSFTTEPISDADLSTLLWCTAGITRPDGKRTV PSCLDLRTVSVCVLRADGAWRWNASKNTLELLTPEDLRAASTMGQHAFVDTAPVTLVFVV EATPRTQMARPHWAYLDAGTMVEAAYLAGTALGLGGVARGSVAGPELGKRMKLPATYEPV FCFTCGHPA >gi|319805383|gb|ADMF01000010.1| GENE 87 102781 - 103683 1149 300 aa, chain - ## HITS:1 COG:RSc1382 KEGG:ns NR:ns ## COG: RSc1382 COG1173 # Protein_GI_number: 17546101 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Ralstonia solanacearum # 2 297 4 297 299 410 73.0 1e-114 MSTETAVDPRIAKSNDALRTPMGEFWRKFKKQPVAMAAAGFVFFLIIVAIVGPMITPFDP ENFFDYDRLNEGPSAVHWFGVDALGRDIFSRIVAGTRISLVCGFSSVFAGAVIGTILGLI AGFYEGWPDRIIMRISDVLFAFPGILLAIGIVAILGGGMLNVVAAVAIFSIPAFARLVRA NVLSLKTQTYVEAARSLGISDTMLLFRHILPGTISVILVYLSMRIGTSIITAASLSFLGL GAQPPMPEWGAMLNEARADLLTAPHAAIFPVIAIFLTVLAFNLLGDGLRDALDPKVDTNR >gi|319805383|gb|ADMF01000010.1| GENE 88 103705 - 104625 238 306 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 74 302 52 311 320 96 25 8e-19 MLRYFIKRLLGMIPTLIIVAVCVFFFIHLLPGDPARLAAGPEADEATVEMIRHSLGLDRS IPEQFVNFVVGACQGDFGTSIRSQRPVIQEIGERFGPTLWLTLTSMVWSVIFGLVIGVIS AVYRNKWPDRIGMTLAVSGISFPAFALGILLMEIFSVELGWLPTVGASSWKHYILPSITL GAAVAAVMARFTRASFVEVLHDDYIRTARAKGVTETKIVAKHALRNALIPVVTMMGLQFG FLLGGSIVVEKVFNWPGMGRLLVDAVDMRDYPVIQASVLLFSLEFIVINLVVDVLYGWIN PSIRYK >gi|319805383|gb|ADMF01000010.1| GENE 89 104675 - 106246 1964 523 aa, chain - ## HITS:1 COG:RSc1380 KEGG:ns NR:ns ## COG: RSc1380 COG0747 # Protein_GI_number: 17546099 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 10 516 13 516 517 540 53.0 1e-153 MQKRQTLTKLLPAALICAAVLSPAGAAEAKNEITVAVASTFTTMDPWNATDTLSQAVAKS FYEGLFKFDREMNVVPSLAESAESSPDGMQHVVHLRRGVKFHDGTTFTAEAVKANFDRIT TPGSTLKRFFLFENVASLKVLDPYTVRFTLKRPNSAFINRLAHPSAVMICPKSLSEKEVS IAFHPCGTGPFVMKNYNPSDVLRVEKNPNYWRAGYPKLDAITWRPVVENSTRVAMALTGE ADYAFPLPSEQVKMVKDKGTLRVDVTPSIMLRFVEMNLTKPVFKDVRVRQALNYAVNKEA LVKVAFAGYADVAEGIAPLSVDYAVKLGPWPYDPQKAKALLKEAGYPNGFEVELWSGYNH TTASKIIQFLQQQLAQVGVKVRVRTLEAGERTSFVESTPQPEQSRHELYYIGWSSSTGEL DYAVRPVLATSSFPPRGSNESYYSNPSVDQALFYALGTTDREKKSAIYAQMQETIWKDAP WIFLVSEQNIAASSKALHGFYIQPDSSFNFEEASLEPASLMKP >gi|319805383|gb|ADMF01000010.1| GENE 90 106264 - 108144 282 626 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 346 572 20 244 245 113 32 6e-24 MEAKETNITPQAELPILEVEHLRVQFTSDSGTTTAVVDESFSIRPGETLALVGESGSGKS VTSLSVMRLVEHGGGKIVNGSIKLRCRDGRVVDLRHANKSELQHLRGSEVAMIFQEPMTS LNPVFTVGAQIAESLILHRGMDEKEALKEAVHLLELVRIPDAERISLRFPHQLSGGMRQR VMIAMALACKPQLLIADEPTTALDVTVQAQILALISELQKEIGMAVLFITHDMGVVAQIA DRVAVMRYGEIVESGTAQAIFAHPQHPYTQALLSAVPRLGALKDIEHPCFFRLIDPDNGK VIEPPSDKLPPPGEKILEVKNLVKTFPVRTDFWGRPTYVVRACDHVSFDLRAGETLSIVG ESGCGKSTTGRAVLRLLDVDSGEVLHRGKSLLRMTRHELQEERRNLQMIFQDPYASLDPR QTVGYSIAEPMMIHNYCSKKEMYDRVALLLKRVGLSPDMANRYPHEFSGGQRQRICIARA LSLKPQIIVADECVAALDVSIRAQVVNLMMELQEEMGLSYIFISHDMGVVERISHRVAVM YLGQIVEMGSRRAVLGNPLHPYTQKLLSAVPIADPQERNLLKLLNLSDLPSPVRKVGDDP VIEPLVEVEPGHFVAKHVVGTMEGHK >gi|319805383|gb|ADMF01000010.1| GENE 91 108823 - 110022 1246 399 aa, chain + ## HITS:1 COG:SMb21279 KEGG:ns NR:ns ## COG: SMb21279 COG1473 # Protein_GI_number: 16264531 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Sinorhizobium meliloti # 20 397 14 389 389 266 40.0 4e-71 MQPILADKAFPELVQWADELAALRRDIHAHPELGFETPRTVDLIVKTLKGWGLEHVDPDE VKGGVVVVINGAAPGATVALRADIDALPMPDNSANPWKSQTEMRCHACGHDGHAAWLLGA LRYLHEKRASFKGRVVGIFQPAEEIGRGALRVVQSGVFEHWGIQEVYGAHDEPTVAKGQY GLCAGPAQASTDFFYITVKGRGVHAARPHLGVDPITTAGVLIGALQTIVSRKVNPIETAV LSISSVNGGNFHTPNVIPETVTLSGTVRTFNEDVRNQIEAEMARMVERVAEAENCTGEFR YDRLVPSLFNTPEAVEHIRSFITHQFGAEHAEEMPISMGGEDFAEYTFKVPGCIIRAGIR DDSHKAALHHPTFDFDDEVIPATATVLAGTVLERLAALS >gi|319805383|gb|ADMF01000010.1| GENE 92 110093 - 110995 1024 300 aa, chain + ## HITS:1 COG:RSc0570 KEGG:ns NR:ns ## COG: RSc0570 COG2962 # Protein_GI_number: 17545289 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 4 288 8 292 298 212 45.0 6e-55 MPFGILATFAAYFLWGLFPFYFHALQGIGALEILAHRIIWSLVFITIVVVAMRRTAWLKG ALMTPKVLGVFCLSALIIGANWGIYVYAIVSGRTIEASLGYFINPLVSIALGSFFLRERL RRPQQAAVVLAGIGVLWITWTTGVAPWLGLMLAVTFGLYGLIRKIAPLGSLEGMVLESLL LTPAAAAWLWFLWSDHELAFISADLTTQILLIAAGPVTAVPLLFFASGVRRIPYSTSAVI QYVSPTMVFLIGVFAFGEPFSKGMLVGFLIIWAAVALFLGEMLLFARRCRNEAREAADRV >gi|319805383|gb|ADMF01000010.1| GENE 93 111094 - 111867 1078 257 aa, chain - ## HITS:1 COG:PM1534 KEGG:ns NR:ns ## COG: PM1534 COG3971 # Protein_GI_number: 15603399 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase # Organism: Pasteurella multocida # 33 239 37 250 267 85 30.0 1e-16 MDAASLTQALYNAFCTNKPLDMKACSGVLNDYESAYAVQRKFAELKGEPTGGYKISLTSK TTQDMFGTTEPLFGEQTKSHIFAAPCTLELDHMNEPLIEVELSMIPKVDLTSSMSDEELL ENITVAGGIEVPDARFEAWFPTLNKYLVVADCAVGGCIIHGTPVDGKTLTVAGLNAIRCE LFKDGKLIKAGNSTEVLDNPIHALKWLVAALEKRGRQLKAGQVVSSGTFFVPPHLERGEY VARYTGTITEDVKLTVK >gi|319805383|gb|ADMF01000010.1| GENE 94 112069 - 112857 1012 262 aa, chain - ## HITS:1 COG:HI0735 KEGG:ns NR:ns ## COG: HI0735 COG2908 # Protein_GI_number: 16272676 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 27 235 7 216 237 174 42.0 2e-43 MDTQNQLPPPALAGLTEIAPLTNPIIISDLHLAPTKPKTIMAFVRFMKTIAPRYPELVIL GDLFDYWIGDDAHPEAQPVIALLKLHAATGRRVIVMPGNRDVMLGAAFARAAGAELIRDP IVADICGRKTLLAHGDQWCLRDVAYQKFRALTHDPRWQAMMLMKSVEERLAIAKQARAQS ESEKGEKSMADMDVVESAVAEAVKAAGVDLVIHGHTHKPAAHMQNGYERWVIPDWELDGP DGTAKSGAITFLEGARPQIQMF >gi|319805383|gb|ADMF01000010.1| GENE 95 112933 - 113424 846 163 aa, chain - ## HITS:1 COG:RSc1164 KEGG:ns NR:ns ## COG: RSc1164 COG0652 # Protein_GI_number: 17545883 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Ralstonia solanacearum # 2 163 15 178 179 231 70.0 5e-61 MIRFTTNLGVIDIELDPEHAPITCANFENYVKSGFYNGTIFHRVIRGFMIQGGGFEKGMK QKPTNAPIENEAANGLKNNKYTIAMARTQDPHSATAQFFINVANNDFLNHTAPTPQGWGY AVFGKVVAGQDVVDQIAKVRTGMVSFYGDVPVEDVVIEKAEII >gi|319805383|gb|ADMF01000010.1| GENE 96 113560 - 114141 741 193 aa, chain - ## HITS:1 COG:ECs0587 KEGG:ns NR:ns ## COG: ECs0587 COG0652 # Protein_GI_number: 15829841 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 31 191 1 162 164 178 58.0 7e-45 MKNRFRILLPLASFAAALTSLPATAAGKEELVEIDTTLGNIVVRLAPDRAPITVKNFLTY VREGFYKDTIFHRVIPGFMIQGGGFTEQLREKPTHDPIPLEARGGMKNERYTIAMARTSY PHSATSQFYINVADNDFLNADQASDGNGYCVFGTVVKGADVVDKIAAVRTTTRRGMNDVP VDVVKILDVKVLP >gi|319805383|gb|ADMF01000010.1| GENE 97 114230 - 114817 758 195 aa, chain - ## HITS:1 COG:RSc1166 KEGG:ns NR:ns ## COG: RSc1166 COG0457 # Protein_GI_number: 17545885 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Ralstonia solanacearum # 16 172 3 172 219 80 37.0 3e-15 MPIFRLRRPLRGYIFSALICSALAAGLTSASGSAMAASEMQELAATLHSAEFSPRVDQLL KAGHPAQALELADLGLEKNPRSAQLRFSRTVALERLGRTEEAAKALRSLIAEYPEIPEPY NNLAVIEAGMGSLEEAVKLLDRALLLNPNFATAQKNRGDVYLALALESYEAAAPSLSSNT ELQQRLKTLRRLTAH >gi|319805383|gb|ADMF01000010.1| GENE 98 115104 - 116510 1615 468 aa, chain + ## HITS:1 COG:RSc1167 KEGG:ns NR:ns ## COG: RSc1167 COG0215 # Protein_GI_number: 17545886 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Ralstonia solanacearum # 2 467 4 464 465 532 59.0 1e-151 MLSIYSTLTREQRPFESLEPGRVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEASGYK VTFVRNITDVDDKIIRRAAERGVTTDELTDEFARAMQEDMLALGCLAPTFEPRATQYIPQ MLNLIGKLEEKGFAYHAADGDVDYAVRKFPNYGRLSGKSIDDLQSGARVQEREGKHDPLD FVLWKSAKPGEPQWDSKWGCGRPGWHIECSAMAMDLLGETIDIHGGGPDLVFPHHENEIA QSEAATGHQFARTWMHSGPLRVRSADGKEEKMSKSLGNFWTIRDALKETNAAYGEGCGAE VLRFFLLRSQYRSPITFSSVLIEEAHKALVRLYTALKGRAADRAALDWNEPFAARFKAAM DDDFNTALAVSVLFELATEINRTGSPALVRQLLGLGRILNILGMEPEKFLQGGAEASDDA SRIEGLIEERALAKKAKNFARADEIRKSLLAEGIELQDGAAGTTWRRI >gi|319805383|gb|ADMF01000010.1| GENE 99 116562 - 117599 1292 345 aa, chain + ## HITS:1 COG:RSc1169 KEGG:ns NR:ns ## COG: RSc1169 COG0825 # Protein_GI_number: 17545888 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Ralstonia solanacearum # 3 324 2 320 322 392 63.0 1e-109 MAKKVFLEFEHDIEALEKKIDDLRELDESEAGHAVSVASEIASLQAKEDELVKKIYAELT PWQCSLVARHPQRPYTLDYIAAIFTDFHELHGDRAFADDEAIVGGLARLADINVVVIGNQ KGRTLKERSRRNFGMAKPEGYRKALRLMKLAEKFDLPVVTFVDTPGAYPGIDAEQRGQSE AIGRNLFEMAGLKVPVLTCIIGEGGSGGALALAVADMVMMLQYATYSVISPEGCASILWK DAAQAPRAAEALALTADRLSQFGLVDRVISEPLGGAHRDPKLMATSLRQVLIDELRALLK LPLNTLMERRSERLRRMGDFEVVGEPATADKSDEVEDAHEVNAAK >gi|319805383|gb|ADMF01000010.1| GENE 100 118210 - 119451 78 413 aa, chain + ## HITS:1 COG:mll4043 KEGG:ns NR:ns ## COG: mll4043 COG0582 # Protein_GI_number: 13473443 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 3 373 70 393 398 112 28.0 2e-24 MLLSEARSKATAIHARLSKGINPTPKSTTRRQAKVLQSSKKAASASKSFADVMDLWLKYR VETNYWVNDRKEPYATSNLLARHVLPHLGKVSINTITVEDIRDVLVPIWTTKTITAKKAL RNIRAILNWARAMNYRESSEDLCSLQGPLGVLMEGARKNAVRKENFAALPYDKIPAFIQA LWHIDGRSRWMLMFAILTASRMKAVRFATWGEIDFENRLWEIPPEHDKIKDLKRDRTIYL SRQAIEVLQKVRPDRPKADDLIFKTAKGGSFSDAATNALIRRMHASKKALDGTGWIDPDK SKREGKVCVITAHGTARSGFRTWAKDDRFGNNRKYDQEAAELCLLHSKASDDYHGAYDRA RLSTERQRLMDDWGGGVLLLAHIWRCSLFLKSPPKSLTFTTECVRVLPSYSRR >gi|319805383|gb|ADMF01000010.1| GENE 101 119457 - 119924 136 155 aa, chain + ## HITS:1 COG:no KEGG:Elen_0763 NR:ns ## KEGG: Elen_0763 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 1 132 1 132 310 179 67.0 2e-44 MPQVQLGKIDRIPVRDVWRHEALDFTKWLAQEENLTQLGDACSIDLELVDMESAVGSFAV DIFAKESGSDRRVVIENQLEYTNHDHLGKIITYATGKNAEVVIWVVARARDEHRKAIEWL NEHTDDECSFSLKSKYGASETRDSTWLNLLTSGHA >gi|319805383|gb|ADMF01000010.1| GENE 102 120098 - 120349 111 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSQLNCGAKLPINEITPHLGLSSYVTSLAIEADTTRFVGVIWFAFYAEKMFKFRLMSEHG FTECFVIRDANFNAASTLLDKGE >gi|319805383|gb|ADMF01000010.1| GENE 103 120638 - 122221 454 527 aa, chain + ## HITS:1 COG:mlr8165 KEGG:ns NR:ns ## COG: mlr8165 COG3593 # Protein_GI_number: 13476749 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Mesorhizobium loti # 3 423 2 469 608 84 22.0 6e-16 MNYIKSLHIEGFKKFTNLDVEFNQYMNILVGENEVGKSTILDAIKLVLNQQYKNSDKSVL KDLFNAKQIRDFECNPSIKTLPKILIEIELELDTSNRNSIRFFGEMHRDKQSHSEKFGIL FKCEYDENIDPDMEESINKGRIPYEYYSLTWTTFANNPYQTLKRPFNFISIDTSDTISSP SFNYYNKSLFASKYDDSIRMHAKNEFRSGLEKIFNEIELPPIDESRKFGIDAKKVILESV VSVFEGAIPLENRGRGMENLIKTKIALERNSKVDVILIEEPENHLSFSTLNKMLNEVSRN KDSSQIILTTHNNLIASRLNLTNVLWIAEIQVKSLKNINQDDADFFIKSDNNSFLHLLLS KKAFLVEGPTEFLLLPAFYKQLTSHTIEEDNISIISCNGISYNRYLRVVEDTDKKIAVLT DNDNDKVKISQAEEFNLKKENQHIFMGKTEQDWTWEACLYRRNKCALDKLIKPDETSEYL VHGENVGDKTLGKMLNQKVESAYKILKSDINLNIPEHICEAIEWLKK >gi|319805383|gb|ADMF01000010.1| GENE 104 122345 - 122563 150 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHMEESLKILQFQHLIHLFTIISFFHMNIPSLSSLASWISKALVLQLYLLRPQQLNQRKD ISRTHVIRVKNI >gi|319805383|gb|ADMF01000010.1| GENE 105 123100 - 123312 73 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|254993653|ref|ZP_05275843.1| ## NR: gi|254993653|ref|ZP_05275843.1| hypothetical protein LmonocytoFSL_12148 [Listeria monocytogenes FSL J2-064] # 1 69 304 370 372 71 52.0 2e-11 MNWSYSKGSTFNKVCVILTSNFENLDSNTFDYSNISPITINKLYVALTRSSGNLYLIKQS TFEKIKRIYS >gi|319805383|gb|ADMF01000010.1| GENE 106 123841 - 124335 176 164 aa, chain - ## HITS:1 COG:SPy0198 KEGG:ns NR:ns ## COG: SPy0198 COG2801 # Protein_GI_number: 15674400 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 152 6 150 268 67 33.0 2e-11 MGLSRSTFYASQKTTPAQIKTDELAEKISEVQNSCFFTIGRRRMGAVLHKRYGIEVCETA LQRVMSRRGLTARIRQVRKAKPCAGKTTRQQLPDNLLNREFQADRPMHRLVTDVTYLPYF ENDEWHWGYLSLVQDLFNRAIVAWVYPRKTHIWPMTWCSYVAIT >gi|319805383|gb|ADMF01000010.1| GENE 107 125130 - 125546 160 138 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNFATHTSAMVFYRKEHGLSQTEVARAMATTQSAVARLEKRLLTGADVTLSALQRYAEAI GLSIELKLKPVKQRYGIFPTAEAAIAAAVHTSACEGRTVPANEVEDLWKMVRGEISRQDL IKKYVAEALAKQEARDRV >gi|319805383|gb|ADMF01000010.1| GENE 108 126466 - 126837 247 123 aa, chain + ## HITS:1 COG:no KEGG:Tmz1t_0376 NR:ns ## KEGG: Tmz1t_0376 # Name: not_defined # Def: integrase catalytic region # Organism: Thauera # Pathway: not_defined # 1 122 21 139 426 70 33.0 2e-11 MVRTEALKYIQLLHERGEGSLKISKRLGLSRNTVRKYLALLDSGQPIVLRVQRARALDLY EEVIKRLFVDCRGHCPNLQRRLKEQLGLTVQLRTLQKFCQPWRKTVLTPQERAVRYEVNL PGR >gi|319805383|gb|ADMF01000010.1| GENE 109 126911 - 127819 366 302 aa, chain - ## HITS:1 COG:CAC3242 KEGG:ns NR:ns ## COG: CAC3242 COG1313 # Protein_GI_number: 15896487 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins # Organism: Clostridium acetobutylicum # 3 293 7 294 298 318 51.0 9e-87 MICNLCPRRCGADRSTPQGLKRSICRATDDVEIALVSLHAWEEPILESGNGAGTVFFSHC NLRCCFCQNYEISAGGKGLKVTTARLTDIFLEEAERGASCIELVTPGHYTRQIREALLSA KAQGLKLPVVYNSNAYELPETLRMLDGLVDIFLPDLKYFDSRLGEKYSGVPKYFEYASEA IRTMFAMTGPARIGDDGLLKRGMIIRHLVLPWQWRDSCRCLDWIHETFGDDVFVSVMNQY MPIYKACLHPEINRPLTTLEYQKVIRHADEIGITKGFMQVGKTAEAKFIPNFNGDHVLAD AG >gi|319805383|gb|ADMF01000010.1| GENE 110 128005 - 128955 832 316 aa, chain + ## HITS:1 COG:RSc1095 KEGG:ns NR:ns ## COG: RSc1095 COG0679 # Protein_GI_number: 17545814 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 17 309 19 298 310 134 34.0 3e-31 MDSVALIAPDFSIILLGLLLRLKFEYSEDFWKQAERLVFYVLFPPLLFTSISGSSLSLGE SAGFLAAGIGAMLIGVCASWCIRYLVKADPVTHASLFQCGFRFNTYIGFALALKLFGDQG FALLALLIAFWVPISNTIAVSALAGAVAKRDAALGEQTNGSMPSLMVVTGKAVVQNPLII ATVLGLCCNLLSITVPATVHHFLKGLGNASLAMGLLCIGAGLRFAALRGSWGLILTGAVQ RLMLLPLVAWGVTAACGLPPAAAGVVILFAALPTAQSCYVMTAAMHGNAPAVAAATSLQT LAAIVTLPIWILLAIL >gi|319805383|gb|ADMF01000010.1| GENE 111 129041 - 130471 1734 476 aa, chain - ## HITS:1 COG:STM1094 KEGG:ns NR:ns ## COG: STM1094 COG4690 # Protein_GI_number: 16764452 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Salmonella typhimurium LT2 # 2 460 20 475 489 452 50.0 1e-127 MCTTIVFGEKASADGSFIVARSADSSSLKAQHFVIHPARQGQTGFYSCKAHGGVNDFTYP LPENSLRYTTIPNWKTQLHGACGFNEAGMGLTGTESIFASEAALAVDPYVKETGITEDDI ADVLLCRCRTAREGAAELGRIIEAQGCGEGFGVAFVDETEVWYLETGSGHHWLAQRIPAD TYFASGNQGRFQTYDPASDDQMASKNLVEFAVEKGLYNPETDGEFNFSKAYTRDDDRDRT YNDPRVWVMQKRLNPSLEQNPDAGRSFPVFLTPERKGTIEDAKALMRDHFAGTEHDPYGH GLRGDEPWRPISVFRTYEAHVMQVRPWLPKEIGQVIYVALGMADLSVFIPFYAGLTQVPA SWSKGTDQCDTESAYWKFRRLQTLAMTDYPKLAPIVHEAFAAFEAETSAAQQRMEEEYLA LKATSEAAARSHLDAFNLKVIAEAEALAEKLLCRLFTIRTADIEALVPAKNRKNKD >gi|319805383|gb|ADMF01000010.1| GENE 112 130729 - 132636 1496 635 aa, chain + ## HITS:1 COG:CAC1050_2 KEGG:ns NR:ns ## COG: CAC1050_2 COG0171 # Protein_GI_number: 15894337 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Clostridium acetobutylicum # 331 629 1 303 310 350 55.0 3e-96 MKIGENATGFIKAAAGSPRVHPGEPLKNAAEICSVIDQAEALKADVLVLPELVLSGYTVA DLFLRAPLLEGVLTALECIKDHLKRPESEGLIVVLGAPIRADGRLFNCAVFLQNSRVLGI VPKSHLPNYQEFYEARWFSPASEAVSSTLELLGDTVPFGTDLIFESASGLAIAAEICEDL WVAQPPAAAAAAAGANVIVNLSASNETAGKAKFRRELVRLQSARSMCAYVYASSGEGEST TDLVFSGHLLAAAGGRIAAESIWQTGMISADIDLERIELERIRFRSFAQGVETKPWRRIH AAPTPSARSALWPAKVDPAPFIPKNADRRRERAREILRMQCAGLTERLRKTGIARVVIGV SGGLDSTLALLVAAAAMDELGRPRSDILGISMPGFGTSSGTRASAEALMRGLGIEFRTID IRPACRQHFADIGHPEDRYDVVFENAQARERTQILMDVANAVGGLVLGTSDMSELALGWA TFNGDHMSMYAVNAGVPKTLVQYLVRVFGEMHPELEEVLAGVLATEISPELLPPDAAGRI QSTEAALGPYALHDFFLYHVMKSGFARAKIEALAAIAFPEVDKALLSKTAATFFRRFYAQ QFKRSSMPDGPKIGSVALSPRGDLRLPSDLGPIES >gi|319805383|gb|ADMF01000010.1| GENE 113 132663 - 133310 521 215 aa, chain - ## HITS:1 COG:no KEGG:Hsero_3711 NR:ns ## KEGG: Hsero_3711 # Name: not_defined # Def: hypothetical protein # Organism: H.seropedicae # Pathway: not_defined # 52 211 25 187 203 74 28.0 2e-12 MKAAAHFIRIASGAVIPAVLAIGLGGYVHAAKGADISPATQTLQDGALSADVRALLAPLA AKRVEGTFEERRSVPGFPKPMLSRGHFTLEGESLVWQTQTPFASLMKVTPEGVFLEAAGE KQALTAAEIPAVGRICTLLTSVMGGRFDALSDLFAVSAAQSEGRVHISADPKSPELAQVV KHIQAEAGSYLEKLTMTGPQGDETVVLFSNVTVER >gi|319805383|gb|ADMF01000010.1| GENE 114 133307 - 134143 738 278 aa, chain - ## HITS:1 COG:RSp0366_2 KEGG:ns NR:ns ## COG: RSp0366_2 COG4261 # Protein_GI_number: 17548587 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Ralstonia solanacearum # 37 274 67 301 310 115 33.0 8e-26 MVNAVYWFSSPRLRAVVCDYQQRVDRAAPFLLKDFGTSAPSARSGLAQLERFSLAILEKF CALSGEDHLAALDVSGDEPFRKDAPKAGCVILTSHTGCQELLSQASPAYSSHPIVILQHT GHARRFNELLERAGARPPQVELFEIGSALSPALVMELADRASQGAYIVLAGDRTPMGSEA SQAVPFFGSPARFPTGGALLADLLGLPLRMMVCTRPKAKERRYRVKFFELAAAGRIPRKA RAEHLQNMAARYAMHLEEELKSSPLDWANYYDFWESLS >gi|319805383|gb|ADMF01000010.1| GENE 115 134340 - 135545 708 401 aa, chain - ## HITS:1 COG:Z4858_1 KEGG:ns NR:ns ## COG: Z4858_1 COG0463 # Protein_GI_number: 15803996 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Escherichia coli O157:H7 EDL933 # 68 301 10 245 246 208 45.0 2e-53 MTESTEDQLQSEPGGSPAQASQKVQTKPVGAAGIGTPAAAVAVARSGIRQSPCTASPTQR PQIQIVAVIPVYDQPAKLESVVQSLRQLALPVIVVDDGSHEPTKSLCDRLAAPQVKVIHQ PFNQGKGAAVIVGFKAAVRMGFTHVLQIDADGQLDFGAVPNLIRLAQKFPHALICGTPQF DASAPPARKWGRRVTNFWCSVNSLSMSFGDAMCGLRIYPLDSALAICENARIGRRMEFDP EILVRLLWAGVRVKNVPVAVTYPKDGVSHYAPFKDTMRISWMHSRLFLQMATRMPIILWS RIFGWTAECECPSGSRKSCCSMPKGKTVPQSKAPKTAQPAAAPVKPQAKAAPKRPPMTPE ENERARRAFHAATVAKRNADRALAQIEQEAVDRPGSSDRSI >gi|319805383|gb|ADMF01000010.1| GENE 116 135816 - 137951 2166 711 aa, chain + ## HITS:1 COG:PA5518_1 KEGG:ns NR:ns ## COG: PA5518_1 COG4651 # Protein_GI_number: 15600711 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport system, predicted NAD-binding component # Organism: Pseudomonas aeruginosa # 3 423 2 414 421 365 53.0 1e-100 MDHSLPLISTLVIAFSLALVFGFIAERVFRSPALVGYLLAGIAAGKYTPGVVADAALASQ LSEIGVMLLMFGVGLHFSLKDLWSVKSVAVPGAVLQMTIATALGACFAHWFFDRHWAEAI VLGVSLSCASTVVLLKALDVRGKLTSPDGRIAVGWLVVEDIATVLILVLLPPFANLMMPG TPGASTRLANADILWMIGQTLFNAALFVVVMLVVGRRVLPWAMGQVARTGSRELFTLFVL AAAVGVAYGASEIFHVSFALGAFFAGMVMRESRFAHRAATESLPLQDAFSVLFFVGVGML FDWHILLESPLEVLTVLLIILFGKSIGAFGLVYFMRYPLHTAMIAAVALAQIGEFSFILI GQAVELGLADMSTVNLVVAGAILSIALNPGLFWAEPHISRWLTSRFAWARRAAMRHAPYE SLPADTEAEKLQGQAVVAGSGPLLDRLAVSLEESGIPVVAVSSDEANAKALDDRKISVVL GDPSTEETWIHAHLHNAKLLVLLESGAESLRIAEAARRVSPNLPIVVAATSRGIWPEVKM EKVTFLSTVEASARLISAQTAAAMRADITLGNPVCKGDVEAAAAEAARQSEAQARAEAGP GVGMTDEMEGAAAEDAAEADAQEAAAQKSAKWSFSRLSGLNKLKGVFKRSKPAATDQPME PAKPAEAAQPADIASANAASDPAPEVGSPEPAAPQVKAEAETETLKPADKS >gi|319805383|gb|ADMF01000010.1| GENE 117 138419 - 139444 1251 341 aa, chain + ## HITS:1 COG:CAC1479 KEGG:ns NR:ns ## COG: CAC1479 COG0115 # Protein_GI_number: 15894758 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Clostridium acetobutylicum # 1 338 1 338 341 451 62.0 1e-127 MEKKNIDWAKLGFAYTPTDYRYQDEWENGAWEGGKLITDKHISLLESACVFHYSQSCFEG LKAYTTKQGKIVTFRPDMNAERMYNTAARLEMPSYPKEKFVEAVLETVRANAAWVPPYGT GCSLYIRPFMIGSGPQIGVAPAPSFLFRIFVMPVGAYYKGAVKPQKLVVSDWDRAAPHGT GDIKAGLNYAMSLHPTMDAHRAGYAENLYLDPQTRTYVEEAGGANVLFVDKDDNLIVPKS TSILPSITRRSLVYVAEHYLGLNVIERKVRFDEVKDMKECCLCGTAAVIAPVGLIHTHEG DIVLPSGMDKMGEISGRLRKTLTGIQDGEIEAPEGWIREVC >gi|319805383|gb|ADMF01000010.1| GENE 118 140034 - 144629 4735 1531 aa, chain + ## HITS:1 COG:DR0183_2 KEGG:ns NR:ns ## COG: DR0183_2 COG0069 # Protein_GI_number: 15805219 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Deinococcus radiodurans # 395 1215 3 840 840 996 59.0 0 MTNSCGLYRSEFEHDACGVGFIAHIKGQKSHSIVSQALDVLKNLRHRGAVGADPLQGDGA GILIQIPDQLYRDDMMNQGVKLPPAGEYGVGMVFLPQEAASRHACEEEIERAVAAEGQMI LGWRDVPIDRSMPMSPVVREKEPVIRQVFIGHSPDVLVTDALERKLYIIRKRSSIAIANL HLKHCKEFYICSCSARTVVYKGQLLATQVGIYYRDLQDARCISALAMIHQRFSTNTFPQW QLAHPFRYIAHNGEINTLRGNFNWILAREKHISSPVLGDDLKKLWPLIFQGQSDSASFDN AFELLTMAGYSLAQAALMLIPEAWEKNKTMNPRLRALYEYNAAMMEPWDGPAAVAFTNGR QIGAILDRNGLRPARYLETKDDLVILASESGAAVIDESRIRRRWRLEPGKILLLDLEQGR IIGNDEVKGSLAAQHPYREWIDKIRIRLDDIPQTPASAPLLLGRNELMRVFGFSREDVER ILKSMAYQGQDPVMSMGNDAPLACLSERPQMLYDYFRQLFAQVTNPPIDPIREAMVTSLV SFIGPRPDLLNIMAVNPPVRLEVEQPVLTGAQMERIRAIADFTDGKFHSKEIDITYPLAW GREAIEARLASIRAAAVDAVRSGINILILTDRKVSRERVAIPALLATSAVHQCLVEEGLR TSTGLVVETGSARSVHDFAVLGGYGAEAVHPYLALAVVESLAKNEEERAKYVDNYLHAIM KGLNKIMARMGISTYMSYIGAQIFEAVGLKKSFIDQYFTNTPSPVEGLDLFDVAGEAVTV HKRAFEAIERKVIPLAAGSQYMYRQGGEHHLWTPDAVVHLQRAVREGSWAEYQTYAGLIN NQARDLLTIRGLFEFVPGKAIPLESVESEASIIRRFSTAAMSVGAISTEAHVTMAVAMNR MKGASNSGEGGEDVRRNAPVTTETSLKAILGGDVEVDYPLHPGDSLRSRVRQVASGRFGV TTDYLAHGDLIQIKMAQGAKPGEGGQLPGKKVSKYIGMLRHSLPGVGLVSPPPHHDIYSI EDLAQLILDLKYANPHAGIGVKLVSQAGIGTVAAGVAKCKADHIVVSGHDGGTGAAPATS IKHAGSAWEIGLAEVEQTLVMNNLRGRVRLQVDGQIKTGRDVVIGAMLGADEFGFGTTPL VAMGCLMMRKCQKNTCPAGIATQDPALRRQFVGRPEHVENYFHFVAREVREIMAQLGVAK FDDLIGHVEYLRKRSGLDGLKASKLSLEKILYKLPNPKGFPLLSTEPQDHELEKAFDLRY AAELSEALKAKRPMRVQTRVGNTDRAVGTMLSGIAAQEAQGELPDDFALFELVGTAGQSF GAFLGKGVSLRLTGGANDYVGKGLSGGSIAVKKSPSFDGRPNENVIAGNACLYGATSGEA FISGVVGERFAVRNSGASTVAEGCGDHGCEYMTGGTAVILGRTGRNFAAGMSGGIAYVWD PNDELAEKMSDGAFELTHVLPAAEQGSDEPLHYGQKDEVLLKRLVERHAELTGSPTAREM LADWPAALGRFTKVFPLEYKHALASLKKEEN >gi|319805383|gb|ADMF01000010.1| GENE 119 144631 - 146118 1490 495 aa, chain + ## HITS:1 COG:RSc2964 KEGG:ns NR:ns ## COG: RSc2964 COG0493 # Protein_GI_number: 17547683 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Ralstonia solanacearum # 1 482 1 479 487 436 49.0 1e-122 MGLDGGFLKFTRLEPRHEPVEERIKHFNEFIAIYSDTEGREQASRCMDCGIPFCQHQCPL HNTMPDTQQYVSDGDWESAWRVLDSTNSFPEITGRICPAPCEEGCTLGLHRDAVSIKAIE KKIAEEAFSRGYVTPQPAAASTGCSVAVVGSGPAGLAAAQQLARMGHAVTVYEKMDKPGG LLRYGIPDFKLGKKVVDRRLDQLVREGVRFVLSIRVTGTDGETLEPGVHDDAESTISISA LQAKYDAVVLALGAEVPRDLKLPGRELAGIHFALDFLIAQNRVNSGGGVNPVQVRGKHVV VIGGGETASDCIGTASRLGAASVTQLDYHAELPLKADLMREWPDWRHIKRTSTSQEEGCM RLFATNTVSFEGKKAVESVKTVQVKWGPGRKITPIEGTESEVKADVVLIAMGYAHPSHAI VKALGLATDKRGSIAAPVDGPEAWRTAAEGIFAAGDGRFGQSLVVNALAEGRECAAAVDK WLRDKQSEAAPLWRE >gi|319805383|gb|ADMF01000010.1| GENE 120 146342 - 146656 487 104 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 103 51 153 155 94 57.0 3e-20 MAWIYLIAAGILETLWAVAMKASNGFTLLIPSLITVLAMIGSVALLALAMRTLPLGTAYV VWTGIGAVGAFAAGVVMFGESLSLMRVTAAGFIVVGLIMMKASA >gi|319805383|gb|ADMF01000010.1| GENE 121 146834 - 147358 44 174 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTSNNLEEQKDIYGNSNDQVASVFGFIRELSKIKNKKIFHVKDVDKKIWIDKIKEDQLP GIRFGDGHQTWVMQVANLPIPVCPLPPKEIAAWLREPNYDDPDWDPNTAIIPFKKLASNI LISGDETNQTEFITIQFEDDDDRVKQFHHWLGVRESWKINLSKTKKNSQMVPSA >gi|319805383|gb|ADMF01000010.1| GENE 122 150438 - 150767 144 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPVFYNIRTKSLGNYILNKAHLRRFTPHNNYAKGFSLIFRLIYTGLHEGRYCMGLFMVFI VLATNARNPLDHKRRVHRCVIIMTQRLYFSFITQSIAEFNNAWYTPKMF >gi|319805383|gb|ADMF01000010.1| GENE 123 151704 - 152264 29 186 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSDEPVDIDKHLAEGVSYIQKLRSLGWTHRQIADVVGISSGYVSQISNGITKPTAAVEA KLRKLVEKGLPIEEVTPSIQDVDKTEKINDTPSVLSNKSTNSSHKLREENYMNAVNELRV LAETKGWPVVDLIKTNHLFAVIAGEYEGKEMQRLIRSKWGVQPVFLPSGNYLTYNTSAWV LYRPRF >gi|319805383|gb|ADMF01000010.1| GENE 124 152575 - 156531 4779 1318 aa, chain + ## HITS:1 COG:RSc1722_1 KEGG:ns NR:ns ## COG: RSc1722_1 COG0046 # Protein_GI_number: 17546441 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Ralstonia solanacearum # 13 993 9 1040 1046 1075 56.0 0 MASIAGIVFNLEGPRALSDFREERLLRALEKVNSAVEAVSSRFIHFVHAEKELDAASVDR LQALLNYGPTPSKVLENTFDVLVVPRLGTISPWASKATDIVGNCGVAGVLRVERGTLFSV QMKAGTVLTDDEKSALAALLHDRMTESAVPPDFPVQNLFVDLQGRPMETVPLLAQGRKAL EEANADMGLALSDDEIAYLADAFEKLQRDPTDVELMMFAQANSEHCRHKIFNAEWTIDGE KKTETLFGMIRATHKAAPQFTITAYADNAAIFEGRDVERLYPRPSDADPFGSTFEMKTER THTVFKVETHNHPTAISPFPGASTGSGGEIRDEGATGRGARPKAGLTGFTTSSLRLNEAP HKWEDDSDCSAGVENAQPYGAPGRIATPLSIMTEGPLGGAAFNNEFGRPNLLGYFRTFEA NVGGVRYGYHKPIMLAGGIGNIRDDQTKKLTPPAGSLLIVLGGPGMRIGLGGGAASSMNT GANSEALDFDSVQRGNPEMERRAQEVIDRCWSMGEANPILAIHDVGAGGLSNAMPELADL SGKGAQFDLSKVPVEETGMSPLEIWCNESQERYVIALDPAGLDKFDAFCRRERCPYAVIG HITEKSDLKVERPGEDDAVNMPMEVLLGKAPRMHRNVKHEDKVLTAFAEEGIELEDAAYD VMRHPTVGSKSFLITIGDRSVGGLTARDQMVGPWQVPVADCAVTTLGFTTQRGEAMAVGE RTPLAVINSAAASRMAIGEAVTNIAAADIELARVKLSANWMAACGAPGEDARLFDAVKAA SEFCIGLGISIPVGKDSLSMRTSWTDAGEKKTVTSPVSLIVSAAAPVTNAMLTLTPEIKK TPVLEDSMLVLVDLGLGKNRMGGSILAQTTQRFGDTAPDCEDPTLLGRFVTSLRKLELSG CVMSYHDRADGGLFAAAAEMQFASRIGIRLTLDSLLEAHGATVLNTLFNEELGALIQVPS DRVKEVVAEMRAAGLADCCHFVGEFIKSDALEVCANGETLAVFPREKLQSAWSEASHLIA RGRDNPACADEEFEGISAERATNLIAKTTFNVDEDIAAPFIASGVRPKIAILREEGVNSQ NEMAAAFLRAGFEPWDVHMTDLLSGRLDLSGFKGLAACGGFSYGDVLGAGGGWAATILNN DRLSAMFRTFFERGDTFGLGVCNGCQMMSRLRSLIPGASHWPQFLRNRSEQFEARLVSVE ILESPSILFAGMAGSVMPIVNSHGEGRVEFLKPEDAVLSHAAARFVDGNGQPAVYYPQNP NGSEGGLTAFTTDDGRFTIMMPHPERSHRAVQLSWHPAQWSEASGWMRMFRNARQWVG >gi|319805383|gb|ADMF01000010.1| GENE 125 156746 - 158953 2082 735 aa, chain + ## HITS:1 COG:STM0701 KEGG:ns NR:ns ## COG: STM0701 COG1982 # Protein_GI_number: 16764071 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 720 1 718 732 1025 65.0 0 MQKLAIAVSNNVSFQNFPKDRVVVKLSEAEMTETSVVLMSVEDAEVGELDRIEAHGFGIP IFIFVERGRYVPDELIGRCMGVVNDDPVEEAYFVRQLVDAATSYEEKILPPFFRSLRRYV STANEQFDCPGHQGGAFFRRHPAGREFTNFFGETIFRADLCNADVDMGDLLIHEGAAAEA EKHAAKVFNADKTYFVLNGTSTSNKVVLSSLLTPGDLVLFDRNNHKSCHQGALVLAGARP VYLETSRNPYGFIGGIDDACFDEAELRRRVAEIAPEKADAPRPFRCAVIQLGTYDGTIYN ARQVVDRIGRLCDYILFDSAWVGYEQFIPMMKDCSPLLLELGPDDPGIFVTQSVHKQQAG FSQTSQIHKKDAHVKGQARYVTHKQVNNAFMLHASTSPFYPLFASIDINAKMHSGVSGRR IWAECVKIGIEARKQLKRTCRYIQPFVPPVVIGRPWESYPTEEIARDLRFFKFEPGAKWH AFEGYGSNQYFVDPCKFLLTTPGIDTETGEYEDFGVPATILANYLRAHGVVPEKCDLNSI LFLLTPSQTTAKISSLTTQIARFERLLDANAPMKEVIPQVYRDWEERYEGYCIRELCQEM HDFSREFNIKDLQKAMFRREHFPKAVMSAQQANFEFMRGNAEYIPLAEAEGRIALEGALP YPPGVICCVPGEIWGGAVKAYFEALAVGVNRFPGFAPELQGVYLEANEDGEKRIWVNVLK ECRRRELEAAGLIRS Prediction of potential genes in microbial genomes Time: Sun May 29 19:26:32 2011 Seq name: gi|319805313|gb|ADMF01000011.1| Sutterella wadsworthensis 3_1_45B cont1.11, whole genome shotgun sequence Length of sequence - 73520 bp Number of predicted genes - 65, with homology - 54 Number of transcription units - 40, operones - 12 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 398 249 ## - Prom 418 - 477 6.1 - Term 450 - 479 -0.5 2 1 Op 2 . - CDS 495 - 1112 665 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 1312 - 1371 7.2 + Prom 1271 - 1330 3.1 3 2 Tu 1 . + CDS 1374 - 1568 137 ## + Term 1682 - 1729 5.1 4 3 Tu 1 . + CDS 2141 - 2332 179 ## 5 4 Tu 1 . - CDS 2336 - 2440 63 ## - Prom 2479 - 2538 1.9 - Term 2629 - 2670 -0.8 6 5 Op 1 . - CDS 2825 - 4081 621 ## COG0675 Transposase and inactivated derivatives 7 5 Op 2 . - CDS 4163 - 4294 88 ## - Prom 4366 - 4425 3.3 8 6 Op 1 . - CDS 4569 - 4775 97 ## COG0471 Di- and tricarboxylate transporters 9 6 Op 2 . - CDS 4845 - 5096 311 ## COG0471 Di- and tricarboxylate transporters - Prom 5309 - 5368 3.9 - Term 5462 - 5504 11.7 10 7 Tu 1 . - CDS 5530 - 7365 1893 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 7473 - 7532 2.2 11 8 Tu 1 . + CDS 7645 - 8913 1476 ## COG2195 Di- and tripeptidases + Term 8980 - 9027 6.2 + Prom 9019 - 9078 2.3 12 9 Op 1 . + CDS 9106 - 11214 1397 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 13 9 Op 2 . + CDS 11225 - 14743 1648 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits + Term 14809 - 14843 -0.7 - Term 14748 - 14786 5.1 14 10 Tu 1 . - CDS 14822 - 15022 331 ## - Prom 15113 - 15172 4.9 + Prom 15054 - 15113 2.0 15 11 Tu 1 . + CDS 15173 - 15793 580 ## + Term 15965 - 16008 1.2 16 12 Tu 1 . + CDS 16181 - 17830 1170 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Term 17861 - 17910 4.2 - Term 17844 - 17903 14.0 17 13 Op 1 . - CDS 18026 - 18940 568 ## RoseRS_3335 phosphotransferase domain-containing protein 18 13 Op 2 . - CDS 18918 - 19649 504 ## COG0637 Predicted phosphatase/phosphohexomutase 19 13 Op 3 2/0.375 - CDS 19668 - 20294 447 ## COG1653 ABC-type sugar transport system, periplasmic component 20 13 Op 4 14/0.000 - CDS 20216 - 20956 436 ## COG1653 ABC-type sugar transport system, periplasmic component 21 13 Op 5 38/0.000 - CDS 21029 - 21880 626 ## COG0395 ABC-type sugar transport system, permease component 22 13 Op 6 10/0.250 - CDS 21877 - 22782 566 ## COG1175 ABC-type sugar transport systems, permease components 23 13 Op 7 . - CDS 22806 - 23975 784 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 24172 - 24231 7.8 24 14 Tu 1 . - CDS 24518 - 25489 772 ## COG0679 Predicted permeases - Prom 25527 - 25586 4.3 - Term 25568 - 25605 1.7 25 15 Op 1 21/0.000 - CDS 25708 - 26616 691 ## COG0477 Permeases of the major facilitator superfamily 26 15 Op 2 . - CDS 26686 - 26925 203 ## COG0477 Permeases of the major facilitator superfamily - Prom 26953 - 27012 3.0 + Prom 26890 - 26949 5.2 27 16 Op 1 1/0.375 + CDS 27121 - 27780 732 ## COG1309 Transcriptional regulator 28 16 Op 2 . + CDS 27808 - 28428 708 ## COG1280 Putative threonine efflux protein + Term 28452 - 28502 11.3 - Term 28447 - 28483 1.3 29 17 Tu 1 . - CDS 28531 - 29376 981 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 29412 - 29471 2.6 + Prom 29465 - 29524 2.6 30 18 Tu 1 . + CDS 29592 - 31964 2848 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 32025 - 32080 14.7 + Prom 32018 - 32077 4.7 31 19 Op 1 . + CDS 32222 - 32656 442 ## Veis_3499 hypothetical protein 32 19 Op 2 . + CDS 32701 - 33669 1170 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 33703 - 33748 9.4 - Term 33691 - 33736 4.1 33 20 Tu 1 . - CDS 33816 - 35237 1748 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes - Prom 35376 - 35435 2.0 - Term 35380 - 35416 -0.7 34 21 Tu 1 . - CDS 35562 - 36857 1055 ## Rmet_2641 major facilitator transporter - Prom 37005 - 37064 5.0 35 22 Tu 1 . + CDS 37373 - 37732 204 ## + Term 37739 - 37767 -0.1 + Prom 37809 - 37868 2.8 36 23 Tu 1 . + CDS 38083 - 38775 172 ## PROTEIN SUPPORTED gi|154150092|ref|YP_001403710.1| ribosomal protein L32e + Prom 38874 - 38933 3.2 37 24 Op 1 16/0.000 + CDS 39127 - 40890 1577 ## COG0729 Outer membrane protein 38 24 Op 2 . + CDS 40894 - 45432 3229 ## COG2911 Uncharacterized protein conserved in bacteria + Term 45479 - 45514 7.2 - Term 45430 - 45469 5.1 39 25 Op 1 . - CDS 45519 - 46058 679 ## 40 25 Op 2 . - CDS 46093 - 46617 730 ## Tola_2807 17 kDa surface antigen - Prom 46799 - 46858 2.3 + Prom 46709 - 46768 2.5 41 26 Tu 1 . + CDS 46843 - 48078 1168 ## COG2807 Cyanate permease + Prom 48084 - 48143 3.3 42 27 Tu 1 . + CDS 48242 - 49510 1526 ## COG3069 C4-dicarboxylate transporter + Term 49562 - 49607 1.5 + Prom 49713 - 49772 9.8 43 28 Tu 1 . + CDS 49952 - 51637 1870 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 51694 - 51737 9.2 44 29 Tu 1 . + CDS 51826 - 52239 372 ## + Term 52267 - 52306 1.0 45 30 Op 1 . - CDS 52313 - 53269 971 ## COG2207 AraC-type DNA-binding domain-containing proteins 46 30 Op 2 . - CDS 53309 - 54175 692 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 47 30 Op 3 . - CDS 54192 - 55271 926 ## Pden_3235 hypothetical protein 48 30 Op 4 . - CDS 55300 - 55920 517 ## COG0716 Flavodoxins 49 30 Op 5 . - CDS 55933 - 56436 451 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 50 30 Op 6 . - CDS 56527 - 57597 1325 ## COG1073 Hydrolases of the alpha/beta superfamily 51 30 Op 7 . - CDS 57635 - 58390 698 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit - Prom 58503 - 58562 2.1 - Term 58587 - 58631 3.6 52 31 Tu 1 . - CDS 58733 - 59986 920 ## COG2814 Arabinose efflux permease - Prom 60207 - 60266 4.9 - Term 59997 - 60038 6.6 53 32 Tu 1 . - CDS 60278 - 60526 244 ## - Prom 60603 - 60662 5.6 54 33 Tu 1 . - CDS 60805 - 61332 447 ## COG3045 Uncharacterized protein conserved in bacteria 55 34 Tu 1 . - CDS 61472 - 62728 578 ## COG0675 Transposase and inactivated derivatives + Prom 62676 - 62735 2.9 56 35 Tu 1 . + CDS 62756 - 63163 126 ## COG1943 Transposase and inactivated derivatives + Term 63196 - 63228 4.3 + Prom 63265 - 63324 2.8 57 36 Tu 1 . + CDS 63365 - 64348 1217 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 64353 - 64392 -0.1 + Prom 64425 - 64484 2.4 58 37 Tu 1 . + CDS 64512 - 65675 1242 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 65697 - 65748 3.2 - Term 65688 - 65732 -0.8 59 38 Op 1 . - CDS 65757 - 66767 1077 ## COG4607 ABC-type enterochelin transport system, periplasmic component 60 38 Op 2 5/0.375 - CDS 66784 - 67746 1158 ## COG4607 ABC-type enterochelin transport system, periplasmic component 61 38 Op 3 10/0.250 - CDS 67836 - 68591 258 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 62 38 Op 4 11/0.250 - CDS 68626 - 69669 1399 ## COG4605 ABC-type enterochelin transport system, permease component 63 38 Op 5 . - CDS 69666 - 70700 1165 ## COG4606 ABC-type enterochelin transport system, permease component - Prom 70872 - 70931 2.6 + Prom 71224 - 71283 5.2 64 39 Tu 1 . + CDS 71459 - 73063 1640 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins 65 40 Tu 1 . - CDS 73086 - 73511 340 ## Ppha_0277 transposase IS4 family protein Predicted protein(s) >gi|319805313|gb|ADMF01000011.1| GENE 1 2 - 398 249 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVHRAYPNGGTSEKLLSVS QYLVSTGETVHN >gi|319805313|gb|ADMF01000011.1| GENE 2 495 - 1112 665 205 aa, chain - ## HITS:1 COG:XF0250 KEGG:ns NR:ns ## COG: XF0250 COG0697 # Protein_GI_number: 15836855 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Xylella fastidiosa 9a5c # 1 181 7 188 304 73 29.0 2e-13 MKKAFLQLHLSVLLAGWTGIFGKLITMSPGFIVLWRIIIAGTLLWGWLALRRTIEYVRPK DRLGIMAVGALLMIQWTLFYAAIKASNVSITIVTFSSMGFFTAILEPLITRTRMSIKEIG FSILTVFGISLIFHFDTQYRTGIMLSLTSAAAAAALAVFFRMYKAKYRATTVMSWQLLGG LACALVLMPWYPASRQKITQSPETK >gi|319805313|gb|ADMF01000011.1| GENE 3 1374 - 1568 137 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIPSPSQLVREGGHMTERTNGHGMYPWGRLVLFVLFLIFLAIVLKAMGWCVGGVCDVGLD ALLK >gi|319805313|gb|ADMF01000011.1| GENE 4 2141 - 2332 179 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWRRHAVPVLTEHADMLKDMDVRVLPSTSPANARMGLEDLLALWRPALDVQSNVGKTVNK IVA >gi|319805313|gb|ADMF01000011.1| GENE 5 2336 - 2440 63 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTPASYPHEESTSRVENAVGNSYFPCISGVIKVA >gi|319805313|gb|ADMF01000011.1| GENE 6 2825 - 4081 621 418 aa, chain - ## HITS:1 COG:ydcM KEGG:ns NR:ns ## COG: ydcM COG0675 # Protein_GI_number: 16129391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 398 1 392 402 343 46.0 4e-94 MIRHKSFVFKLKPDGATRRSLAKACGCVRFVYNKALDWNKEQREKDQTFRVNYPKLCALL PEWKEKFPWLGECHSQVLQQGMKDLMTAMVNFFEGRAKFPRFHKKFKDEDSIRYPQGFKV DEASRQVYLPKIGWVGYRRSRFINGKIKSVTVKRKADGWYVSILTEREIEAPVHPKAGRE IGLDAGVKKTAALSNGKIYLPVDAFRSSKDKLAKMQRRLKRMVRFSKNWKKQQKKIAKLH KKIADTRRDHLQKLTTDICKNHAVVYREDLRIKNMTASAKGTLEEPGTNVRQKSGLNAAI LDQGWGILFGLLDQKMKELGGEVFAVPPANTSRTCPKCEDVSPLNRLTQARFCCRKCGFE GNADVVAANNILRRGQRLRACGELQSTAAVQVNRPSRKRRAGQQQEPIRRDPQAPENA >gi|319805313|gb|ADMF01000011.1| GENE 7 4163 - 4294 88 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIALSVEFPQTGPEIAAHLLGGRPYGHQVLIREDGAAVFRHKD >gi|319805313|gb|ADMF01000011.1| GENE 8 4569 - 4775 97 68 aa, chain - ## HITS:1 COG:CAC1590 KEGG:ns NR:ns ## COG: CAC1590 COG0471 # Protein_GI_number: 15894868 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Clostridium acetobutylicum # 3 64 119 181 476 72 55.0 2e-13 MIIKLIGRSSLTLGYSIALSELVVSPAMPSATARGGGVFYPIVRSLSEAFGSQPGPSSRK NGAYQNEP >gi|319805313|gb|ADMF01000011.1| GENE 9 4845 - 5096 311 83 aa, chain - ## HITS:1 COG:BS_yflS KEGG:ns NR:ns ## COG: BS_yflS COG0471 # Protein_GI_number: 16077824 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Bacillus subtilis # 9 83 19 93 478 78 53.0 3e-15 MNPTLRNWLIILVVGAAIWFSPIPTGLKPDSWHIFAVFVATVLGFILHPMPIGAIAFISL TFCCFTGLLKTSQVLIGFGNGTI >gi|319805313|gb|ADMF01000011.1| GENE 10 5530 - 7365 1893 611 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 142 608 51 498 502 135 30.0 2e-31 MPNRSLPAVRLLCAAVMLAAAAMTSAAQASADAQDASNVLKMKPGAYVESAIGWNGPIEV KTTVSDNRIDSIEILKSDEVPYIADEPMKAIIQKVVSEQNLSVDVVTGASRSSEALLRAV GQAVQAAGGDLKFFTHEPVSIDPATLPEGEEAQADVVVVGGGASGLAAAASALESGARVI VLEKAPHTGGSAALSAGIVTAAGTDIQKASGLPADSAGLAKLWLEDQKRSVKGAPANLPD AAQVEALVKQSAETVDWLTKKVGMQFSANAAAADGIGAYQLLPISSDASRPAGAEEVEKL EQYVKKLGGIIRTATPAWKILTTDDGRVSGVAAADGKNRFTFRAKSVVLASGGFAADLMK VTSRQPRWAVYVERTGAAKTSTGDGLTMGLQVGAKEVSDSWLMGTQFAPAYPEMTAAMLG ERGFAGATLVNEKGLRFVKEDLPNITSEMSQQLDVWLLTDSKDPEKAKTLRNYLGFDTVV HGSTPEELGRRMGARADNVKQTIEKLNADAAAGKDTAFGRDPINFTSLTQAPYFAVKVRP VISGTIGGFVVTPDFQVLDNALKPIQGLWAAGELANRAFYNRVYEPGTSLLIAYASGRAA GTSAAKAALSK >gi|319805313|gb|ADMF01000011.1| GENE 11 7645 - 8913 1476 422 aa, chain + ## HITS:1 COG:CC3032 KEGG:ns NR:ns ## COG: CC3032 COG2195 # Protein_GI_number: 16127262 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Caulobacter vibrioides # 23 411 20 412 412 247 39.0 3e-65 MADHVPQLEPKMLERVAALRGLPAVEAAFEVCAEEVERAMAEQIRISETESPTFAEKVRG ELIMELLREYGLTDVVMDESGNVVGRRPGTGAGPVLAIAAHLDTVFPAGTDLKVTKDGAL YRGPGIGDNASGLRSMLQVLRALNRAQIATTGDILFVGTVGEEGNGDIRGAKALFDGSRQ IDGFIALDMADVNTVQNGATGAHRWRVAIEGTGGHSYLDYGMVPSAIHAMGRALNVIADF DPPSDPKTTFTVGTIKGGTTVNTIAARCEVDVDMRSVNLEELDELEKKTLDAFRLGVELE NKRWPKAGPERQLKLVLTQIGNRPAGMQPDDSPAVQAALCAMKQMDLEVKQCRPSSTDAN KPISIGVPSVCIGTGGVTHNEHSLKEFFDSTGMEKGPQLALLTTLALVGIDGVSTPMLPK LG >gi|319805313|gb|ADMF01000011.1| GENE 12 9106 - 11214 1397 702 aa, chain + ## HITS:1 COG:RSc1170 KEGG:ns NR:ns ## COG: RSc1170 COG0037 # Protein_GI_number: 17545889 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Ralstonia solanacearum # 200 630 26 436 462 176 37.0 1e-43 MSKEDVQKKASAAEAVLTLEAVSTVKGLVGPAVKPKKRAAAKETSSSAKRSGESEKTAPK AKRRTSSASPRPRRQGIRADALIRARDRQAQESSLQEGAQALEAFDDAYPLPIFEADADP EAPRTGPAKLPDLPLIEQLEAEALLNRPKQTKKKRPPTAGTALAQRLSGLVKSALTEASD HLLGRSSPEFMLVPLNPVRVIVALSGGRDSMALLDVAARIAADRRQQLIAELRAVYVHHG LEREADAWEEHCRRECEKRGVIFEAVRVRVQRSGDGIEAAARDVRYRALAQYALKSGCSI IMTAHHEDDRIETFLLQWMRGAGLEGLAAFPEVRELAAPSMEDAKAVQARKQVFLLRPWS GVLRRDIERYVKNRRIPYVDDPSNNSPKYARNRVRSEIIPRLEAIRPGFSASAARSVGLI GEALEVLKSVARADLEACRSETMPHGLSVYRLLELIPARQAWCLRAWIAAEGLRPLSKAR LDDLLRQVRETHSDATFSFHVQRKEIRRWGSDIIVRDAVTRRLGVERDAALSPSEGAHEI ALPQWGGVIEMVPCMGDEDGIARSRVTAPEAKLEVRAAVGAVKLKLWALRPGKALKDLYA QAGIPAYVRVDMPKLWLNNELLFAAGLGMDVRFADDPAKYPDRVKFLWRPDRSLWDARPM PNYAELPEAERRMREARVREAAKSSLRLRESIARERSAEKNR >gi|319805313|gb|ADMF01000011.1| GENE 13 11225 - 14743 1648 1172 aa, chain + ## HITS:1 COG:SA0089 KEGG:ns NR:ns ## COG: SA0089 COG1112 # Protein_GI_number: 15925797 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Staphylococcus aureus N315 # 731 1112 670 1030 1050 157 30.0 9e-38 MLSRAEQIDVLRYWEEIELLTPPDYRVVENERLLVCEWKSGRPAGREAQAIAKWQKERWQ EPFEYPERAPRGVVTDMMPVFMVYVGILPKRDVYRRLIDEMKAFAAFSAGRSETAASAAK TAPSGWNEEWIASSAEGGSDLRGSTLLAAFMLNPWGKYIDESIHVAGYVGALEYLRSMRT AVCAEDAPPMDFITGAQMSCAKLARQVENNIAQTLRQAAGVPGTFLNAERFKSDAALGED ANKDEQRRGENDWIRLTDPHGEAEPVPEGLIAEIGRFLIQAAGFPENSIVTVAAAVRFCR PSERRLPDDSVFMESFYLHDIRQAHSELEQAGVKPFGSPDFVHYAAHLQASSEKVGEEGL PSKNTNVETVDEEAAAPPESEAFAAPIGAPLARLLACAADEKLPRIDLLKEPFVVADLAS PRSLASGRWPTNAAHHLYLCQQAAMAGILRMGPNSAQGFGPLVSVNGPPGTGKSWLVRDL VAEIVVRRARKIAGKNYSREVFNDQQSVTFNLPGGRTETFTPFARDVIKDSFILVASNNN AAIRNITDALPRSYTRRPNVTDDRSAAGRPAYTYWRDCALGVFAHAAGIASGKKNSQKGA EAAVKRVSADAERSLQEMRNDMLGRVNRPEMVWGLVSATLGSRRNCQLIARSVLGVGGRN IFGSQIQNQIDDWVRECEFRHELPEDVWMRAREAFLELDRRVEERRQRMTERLSRMAPPP AFQKPLSEDPQQHKSSLWVDEEFENLRSELFEAALTLHAATLGAQSDWAKKGFRAVGVYL TENAPSFTAGSGIDIFEFLSFLIPVLSTTLASTSRLLAHVNPGEIAWVIIDEASQASAQS AVGLLNRAERAVVLGDPRQLMPVVSMPQPLDAFLRSRYPSVDRLWSPHVSSLQSLADQTM EVGALIHDPVAESDVWTGLPLRTHRRCQSPMFEIANTLSYGGQMVQMTPRSDDGTLVTSC WIDILGHSYEPPARRNARGRAVTSVRGDPKVIREEMAWLRHCILRLKDNAKFFGRRVYIL SPFRSVADAAARILREIGVTGANGLTAVGQKVEIRAGTVHAFQGQEADIVFLVLGSVPGI RGHAQRRWAALPANLINVAVTRAKSGLVVVGDWGEWTLERTFAIMAESLERRQVTVAPNA IVFRADQNAAQSAAQKSLFDSEKSAEPQKREE >gi|319805313|gb|ADMF01000011.1| GENE 14 14822 - 15022 331 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFTFFTIVFAIVWAVVSFILLFKVWDNIGPIVLSFSKSHIVQLLAMAIIFLIIWGVPGWL WMKIFG >gi|319805313|gb|ADMF01000011.1| GENE 15 15173 - 15793 580 206 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPQYDLIVPSGEAVLVDRATGVRLRLSAESGPLRLGSVTLDFAVEPKGLNASSGQPGEAA GAQTAPLSVPTVSQDYGLTASDPTLAAFERMQRLPPGFGANPAEAFGEGPIPTPASHSPV RVLDAPLEGLTRDEFEETLAALVRRRDDVERETEFLREIEADPLDIDDLKTELSKIDQQF SAVSKRFSDWEQLQKRIDEEHAADTF >gi|319805313|gb|ADMF01000011.1| GENE 16 16181 - 17830 1170 549 aa, chain + ## HITS:1 COG:CAC3170 KEGG:ns NR:ns ## COG: CAC3170 COG0129 # Protein_GI_number: 15896418 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Clostridium acetobutylicum # 4 546 9 547 552 633 59.0 0 MKDGVNAAPQRALLKALGLCDDEIGRPLIGVVSSKNDIVPGHMNLDKIVDAVKQGVALGG GVPIVFPAIAVCDGLAMGHVGMKYSLVSRELIADSTEAMSIAHPFDGLVLVAACDKNVPG LLMAAARLNVPSIVVSGGAMLAGHFEGRKVSYSDISEGVSRFRTNRITPEQFLDLENNAC PTCGSCSGMFTANSMNCLTEVLGLALPGNGTIPAVHSARLRLAKETGLKIMELVRRDLKP RDIMTRKAFENALAIDMALGCSTNSMLHLPAIAHECGIELDLSVANEISSRTPNLCHLAP AGHHYIEELDEAGGIRAVMAEIAKLGFLHTDCLTVTGKTVGENIAGAKIKNEEIIHTIER PVSKEGGIAVLKGNLAPEGSVVKRSAVAAEMMHHKGPARVFDCEEDALSAIYGGKIKAGE VVVIRYEGPRGGPGMREMLNPTSAIMGSGLGSSVALITDGRFSGATRGAAIGHVSPEAAV GGPIALLEEGDLIEIDIPANRISVDVTDEELARRRAAWKPRTPRVTTGYLARYAKQVSSG CTGAVLRPL >gi|319805313|gb|ADMF01000011.1| GENE 17 18026 - 18940 568 304 aa, chain - ## HITS:1 COG:no KEGG:RoseRS_3335 NR:ns ## KEGG: RoseRS_3335 # Name: not_defined # Def: phosphotransferase domain-containing protein # Organism: Roseiflexus_RS-1 # Pathway: not_defined # 5 297 4 298 300 257 49.0 4e-67 MTILLPFNEAGQWLRGSLHCHSTNSDGEVPPEQVAARYKAEGYDFICVTDHFRPEFNYPI TDLSVFNDDVFLTIPSAELHIMATSYGKLWHLTANGLPGNFQPPMTDETPAQYAQRAADA GAFVSIVHPSWYQLTLEDAETITCAHAVEVWNAGCQIMHSRGDGAYLLDGLLDRGRHLLC TAVDDMHGHLPDFALAWVMVKSSERSQAAILSALKRGAFYSSEGPEIKHMVLNGRKLVVH TSAASTILVNGQGYTNAFKTGVNITHTEIDLSDFDSPWFRVIVTARDGRHAWSNPYWFED IEAQ >gi|319805313|gb|ADMF01000011.1| GENE 18 18918 - 19649 504 243 aa, chain - ## HITS:1 COG:mlr3618 KEGG:ns NR:ns ## COG: mlr3618 COG0637 # Protein_GI_number: 13473121 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Mesorhizobium loti # 6 230 1 221 224 134 38.0 1e-31 MPALPMSWPKLLILDCDGVLVDSEPLACEADAAAVQIFGTKMLSSAQAMKRFTGKSAAYM RDVLTHEFGVTDIDGCMQKKDDILWGLYREKLHTTPGLLAALHKLREAGIALCVASNSGH QRLEHTFAVTDLAAFFGNNVFSAEDVAHGKPAPDLHLYAAARMGFKPTEALVIDDSPSGI EGASAAGIRSLGFIGTNRLGKPWETALMAAGAQDLISSFDELLLKLSLCGKFQSCTNDNT ASL >gi|319805313|gb|ADMF01000011.1| GENE 19 19668 - 20294 447 208 aa, chain - ## HITS:1 COG:AGc689 KEGG:ns NR:ns ## COG: AGc689 COG1653 # Protein_GI_number: 15887743 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 208 222 429 430 201 47.0 5e-52 MDKDGKHCGFNNDFGLNAMRLCRRIVTEGGMTMRDYEQSRQQFVAGKIGIIASSPNAARA FTDLVGSKFKLGCQIYPRMNKDHGRLPTGGNGGMILTKDPIKQRAAWEYLKFACGPEGQK IAVLGSGYMPTNKLAEKPEYLGDFYKKNPLWYTPIKQIPFAMGWQGYTGNNGFRIWTKQR DIIGLVMRGSITPEEGVRQIVSATESLF >gi|319805313|gb|ADMF01000011.1| GENE 20 20216 - 20956 436 246 aa, chain - ## HITS:1 COG:AGc689 KEGG:ns NR:ns ## COG: AGc689 COG1653 # Protein_GI_number: 15887743 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 208 1 208 430 152 39.0 7e-37 MPFNRRQMLQLMTSLAVTTACPAMAWEPESPVELELLHAMPGQDAYFRQVAEAFSVKNPK IRIRFRASPANYPEAHQSILRAAITNKLPDIYHSAWIYFEEAVRQLKKRNAICDVTDLFK AEGDAWAQENYYQSMIDIGTVDGRLYALPFAASTPVFFYNADLVKAAGGDPDNFPTEWEE IIRLGSAIKKLGNADGISFDVEVWPDDWPGRRSSLNKAEASWTRTASTAASTMTLVSTPC VCAAAL >gi|319805313|gb|ADMF01000011.1| GENE 21 21029 - 21880 626 283 aa, chain - ## HITS:1 COG:AGc688 KEGG:ns NR:ns ## COG: AGc688 COG0395 # Protein_GI_number: 15887742 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 283 10 273 273 256 50.0 3e-68 MMKMLLSRQSPASPQQLIIHALLLIAAFITLFPFYWMVITSFKTPNEVFTSAFHWLPQVW NGAENYLAAVSKAPIFTFMRNGLIVCFGVLACQLLVAIPTGWALARYDFRGKKLLFLIVL LGLAVPIQAPAIPLFIALATFDLLDTFFALMFPFFLSVFAIFLFRQAFKTFPDDIVLAAR LDGMKEWEILWRVATPSIKPQIAAFAVFSFVAHWNDLYWPLIVVTSPDMVTPPLGMAQFS DPETGTNFGALMAAATVMVIPVVLFFAVMQRHFMESVTQSGIK >gi|319805313|gb|ADMF01000011.1| GENE 22 21877 - 22782 566 301 aa, chain - ## HITS:1 COG:BMEII0113 KEGG:ns NR:ns ## COG: BMEII0113 COG1175 # Protein_GI_number: 17988457 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Brucella melitensis # 31 300 1 270 270 226 48.0 5e-59 MHIQDAPRRLRFWRPDAAAKTFTLPAWALIVLTLIAPITIVIVMSFTDYQLGNTEVRWVG LENYSTLVLGDDFLRALKNTVLYAVLTVPASVFVGLMLALLVNQVKIGSRVYRALFFLPV ASTLVAMAIVWKYLLHDAIGPINLFLRWLGFAGIPFFSSPEWSMFSLAIIGVWQLAGFNM VLFLAGLTAIPSEIQDAATLDGADSFWRRLFTVTLPLLSPTMLFVVTTSSITAFKLFDAV AVLTKGGPQGATDVLLYATYREGFENLNTAGAAAMTVVFLVIIVAASWIQARISEKRVYY K >gi|319805313|gb|ADMF01000011.1| GENE 23 22806 - 23975 784 389 aa, chain - ## HITS:1 COG:AGc685 KEGG:ns NR:ns ## COG: AGc685 COG3839 # Protein_GI_number: 15887740 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 320 3 319 381 306 54.0 6e-83 MPSAVTIKRLKKVVGGKSILKSIDLAVRPGEFLTLVGPSGCGKSTLLRVISGLTEFTSGS VLIDDKEVSELAPRERGVAMVFQSYALYPHMSVAENIATPLNMAELSSLERAPLIGRLFG AEKRRSIEDRVRAAARLVELEPYLQMKPSQLSGGQRQRVAIARAMVRRPGVFLMDEPLSN LDARLRTHMRGKIAELHQRLGATFIYVTHDQSEAMTLSDRIALMMEGEIIQLGTPDELYE RPDNIRVAKFIGSPEINLLPALVRSGRLIFNGQATALRIASPDSTVTIGIRAQRVHTADV DADGPLIQLTVHREETLGEDVLLYGETAVDGRSYPFVARASAKQTYQLRKESSSWNKPIL LEAASSGVLVFDEQGERIVSRLNGMQEAA >gi|319805313|gb|ADMF01000011.1| GENE 24 24518 - 25489 772 323 aa, chain - ## HITS:1 COG:MTH1382 KEGG:ns NR:ns ## COG: MTH1382 COG0679 # Protein_GI_number: 15679381 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanothermobacter thermautotrophicus # 5 319 3 302 302 78 25.0 2e-14 MLEAFLNSLGCVLTMSLLAGAGYYTASRGWYDQNSQQLIARLVTFLSLPCYLFASVSERL THDELLSLASAMIIPFASIWLVFFTSRAAAHIFRIERVHSGVFSSAYTASNNMFIGLPVS IALFGEEAVIPTLLYFFANTTFFWTMGNYMESIDGAVHDQRQIPKVFSLTTIKRVFSPPL CGFLLAIVLLLLDWHMPAPIMSAAKYMGGITTPLALVFIGLMIYRIGIRNIEFSKDLMVA LCGRFVICPLVCLSFTMLLPVGLPELYAKVYVIQAALPCITQIAVLAKYHHADVEYATTC VASTTLLAAIALPIWMMILTAIY >gi|319805313|gb|ADMF01000011.1| GENE 25 25708 - 26616 691 302 aa, chain - ## HITS:1 COG:ECs1866 KEGG:ns NR:ns ## COG: ECs1866 COG0477 # Protein_GI_number: 15831120 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 2 286 102 380 387 119 30.0 9e-27 MRFFEGLGAAGAIVLSRSIAADRYTGRELGSFMGVMGAIQGIAPVTAPMLGALIADAAGW RGIFWILFGMGVVLAFITLFVFVETLPRSRINSAQRSSNGTQRESIRESSAKLIADPVFC GIVFQQLLASGILFGHISSSPFIFRGHFDLSPELYGLTFGLLALGITAGAVISSRIDPLK ALGVGAVGMLVCAVLVAVCFITNLSLWAVLPFYFLLMAFLGLTLPAAMTAALTLHRQRAG FAAAVIGSVRFVGGGLVAPLTAIGEVTRTASIIFVVCGVLLVLISFWLNRRMKLIRGDEL KL >gi|319805313|gb|ADMF01000011.1| GENE 26 26686 - 26925 203 79 aa, chain - ## HITS:1 COG:BS_ydgK KEGG:ns NR:ns ## COG: BS_ydgK COG0477 # Protein_GI_number: 16077635 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 4 79 6 81 402 67 44.0 7e-12 MTASSNSRIFLLLFLATLAAFGPFVTDFYLPTLPEQTTDFHTSPAMVQLGLSNIMWGLAA GQLLVGPISDRRGRKKPLF >gi|319805313|gb|ADMF01000011.1| GENE 27 27121 - 27780 732 219 aa, chain + ## HITS:1 COG:RSc0031 KEGG:ns NR:ns ## COG: RSc0031 COG1309 # Protein_GI_number: 17544750 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 32 205 33 205 218 142 46.0 5e-34 MPVLEPAQVAPVKEVGEDPVTLRVPRSGRAVGSRRKDILQTLAKLLEDPQCDRITTALIA KKLKLSEAALYRSFPSKGAMFDALIGFIESSLLDLFAQIRDDDALTQIGRVQMMVSVMLD FSDANPGLTRVMTGQVLMKEDPKLTERMTHLYDKLEMGLRQTLREAVLAQEVPANFDSSA RAGLLMNWVLGRWLRFVMTSFAVRPNGVSAAGLDPFLKP >gi|319805313|gb|ADMF01000011.1| GENE 28 27808 - 28428 708 206 aa, chain + ## HITS:1 COG:BH3495 KEGG:ns NR:ns ## COG: BH3495 COG1280 # Protein_GI_number: 15616057 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Bacillus halodurans # 4 200 5 200 208 126 37.0 2e-29 MAFSLWLAFFGASVLLAIAPGPDNLFVLMQSAVFGVRAGMIVVLGLATGLLLQTLAAALG IAAVVAAVPALFWAIKCLGAAYLLWLAWQAWTHAKDAARGHDAVKLSGLALWRRGVVMNI TNPKVQIFFLAFFPQFVPAGVTGWPLVLQMVIQGVTFIFATIIVFGAIAWGAGALADRLR SARFQEILNRTSAVIFVGLAGFTLLS >gi|319805313|gb|ADMF01000011.1| GENE 29 28531 - 29376 981 281 aa, chain - ## HITS:1 COG:RSc1420 KEGG:ns NR:ns ## COG: RSc1420 COG1806 # Protein_GI_number: 17546139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 278 1 276 279 315 56.0 7e-86 MTDTEKAKKTRQIFIVSDGTAITAETLAHSILTQFPDLHYHQTRIPFVNSVEKAVDTARR INAVEREEGLRPIIFTTFVEPDIMRTFNELVSGHIIDLFRKFVGPLETELGMKSEHSIGQ THRIRDDEKYQRRIAAIDYTLQHDDGQTNRGLDEADVILVGVSRSGKTPTSLFLAMQFGI KVANYPLIPEDFDRGTLPEALLPLRSKLFGLSIAPERLSEIRNERRPGSRYASLPNCQQE IHDAEDLMHREGIRWLNSTTKSIEEISATIMSELGLDKRKA >gi|319805313|gb|ADMF01000011.1| GENE 30 29592 - 31964 2848 790 aa, chain + ## HITS:1 COG:RSc1421 KEGG:ns NR:ns ## COG: RSc1421 COG0574 # Protein_GI_number: 17546140 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Ralstonia solanacearum # 2 787 6 793 795 1130 71.0 0 MVQGRYVFPFSQLRMTDVDRVGGKNASLGELLSQLTSAGIRVPDGFATTAEAFRLFLKEG GLEDRIHARLAKLDVDDVKALAAAGAEIRGWIESAPFPAELEKEIREFYEWLREGRDISV AVRSSATAEDLPDASFAGQQETVLNVVGIDAVLHHMKEVFASLYNDRAISYRVHKGFTHA EVALSAGVQRMCRSDKGAAGVMFTLDTESGFDQVVFITASYGLGETVVQGAVNPDEFYVF KPTLDAGKFPIIRKTLGSKLIRMEFETDASVGRTVRTVDVDPEDRRRFAITDEDVIELAK FARIIEKHYGRPMDIEWGKDGTDGKIYILQARPETVKSQQKSVEVQTKYSLGSKGRLLVQ GRAIGQKIGQGVVRIVQSASEMDRVLEGDVLVTDMTDPNWEPVMKRASAIVTNRGGRTCH AAIIARELGIPAVVGCGDATERLMEGDKVTVSCAEGDTGNIYEGLLEVKTEQVVRGALPE IPVKIMMNVGNPQLAFDFQSIPNQGVGLARLEFIINNNIGIHPKVVLEYPNVPGELRDAV ERLSAGYPSAKAFFERKIAEGVATIAAAFYPKKVIVRLSDFKSNEYRKLIGGANYEPVEE NPMLGFRGASRYIANSFAECFAMECRAMKFVRDEMGLTNVELMIPFVRTVEEARRVTEIM EQHGLKRGVNGLRLNMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGLVAA TFDERNPAVKALLSMAIRACRAQGKYVGICGQGPSDHADLAKWLMDEGIESISLNPDTVV DTWRRLARGS >gi|319805313|gb|ADMF01000011.1| GENE 31 32222 - 32656 442 144 aa, chain + ## HITS:1 COG:no KEGG:Veis_3499 NR:ns ## KEGG: Veis_3499 # Name: not_defined # Def: hypothetical protein # Organism: V.eiseniae # Pathway: not_defined # 7 140 5 138 141 66 34.0 3e-10 MFSVSPAIAWLIAGIAVLGAEIFLGTAYLLVVAFAFGATAAGAAVGLDFTMQLVVCAAVL AGGCLSVIAVRRRNAGRKDPSAKLQHLDSGQWVTVDVVGSDGLAVVQYRGAPWVARPEGN EPLTPGRWTIARVDGTQLVLGRRF >gi|319805313|gb|ADMF01000011.1| GENE 32 32701 - 33669 1170 322 aa, chain + ## HITS:1 COG:RSc1423 KEGG:ns NR:ns ## COG: RSc1423 COG0330 # Protein_GI_number: 17546142 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Ralstonia solanacearum # 11 312 7 308 308 399 69.0 1e-111 MPIEITGFLILSLIIVLVAVVFASQGIKVVPQQTAWVVERLGKFHAVLSPGLNFIIPFID RVAYRHSLKEIPLDTPSQVCITRDNTQLTVDGVLFFQVTDPQRASYGTSNYIIAVTQLAQ TTLRSVVGKMELDKTFEERDLINKSVVSAIDEAALNWGVKVLRYEIKDLTPPAVILQAMQ QQITAEREKRAVVAASEGRKLEQINLATGAREAAIAQSEGDKQAEINKAEGQAAATLAIA TATAEALRRIAEATQAPGGATAVSLQVAEKYVAAFGELARTNNTLIVPGNMGDLSTMITS AMKIVDGAKNGAAASSGLPSKP >gi|319805313|gb|ADMF01000011.1| GENE 33 33816 - 35237 1748 473 aa, chain - ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 1 473 1 472 472 653 69.0 0 MYNPKSRRADEFINREEIEATLKWAEEHKSDRPLIESLIDKARTAKGLTHREAAVLLFCD LEDCNERIFSIAREVKEKIYGNRIVLFAPLYLSNHCVNTCTYCPYHAKNKNIVRKKLTQE EITREVVALQDLGHKRLLLEAGEHPKYNPIEYILESIKTIYSIKHKNGQIRRLNVNIAAT TVENYRKLHDAEIGTYQLFQETYHPEEYKKLHPKGPKADYAWHTEAHDRAMEGGIDDVGL GVLFGLTLYKYDFVGLLMHAEHLEAVWGVGPHTISVPRICPADDIDPHTFSNAVPDAIFL KIVALIRLAVPYTGMIMSTRESARIRSEALELGISQISGGSRTSVGGYTIADIRDIENSA QFETNDRRTLDEVVRWLLENHYLPSFCTACYRAGRTGDRFMEFAKNGAIADFCQANAILT MKEYLCDYASPKTLVEGEQVIQLELPKVKNEKFRNASVKRLERIAQGERDFRF >gi|319805313|gb|ADMF01000011.1| GENE 34 35562 - 36857 1055 431 aa, chain - ## HITS:1 COG:no KEGG:Rmet_2641 NR:ns ## KEGG: Rmet_2641 # Name: not_defined # Def: major facilitator transporter # Organism: R.metallidurans # Pathway: not_defined # 1 375 3 366 396 203 35.0 1e-50 MPQVPIRSLLKVLTITLIMHVCSTGMRFTATLDAINSGASTFWVGAMLASISLGPMCFAI PSGRWLDRGGPRGPLAGARIGMMLAGSSVLLFPAAQYGIASLFAAATLTGFSFMLTNVVV QRLTGDVSTPKTRQLAFTALSLTTATSNLASPVAAGYLIEHFSYAAVYMWALGLPLLLSI VLLFPGMRRLLNTASRRRKKFQEADGQTNKERSGSAMDFLKDPPMRAVLCASVMISIAWE VGNLLIPVYADSVGLSPSEIGWVLGSFACATFVVRFCTPILLRYVLEWHMIVLSLFLATL AFAVMPFTHNPYALMAAAFLEGLGLGASLPNMMSLVYLFAPPHRIGEAIGLRITALNAGK SIFPLFAGFLGTLIGAGGSIWVLAACTAGGFAYAACAASEVLKRMRALRIDGEYAKKPVA GDPHGHQELHR >gi|319805313|gb|ADMF01000011.1| GENE 35 37373 - 37732 204 119 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIASRVVRLYMRDVETHQYFELLRGGASDIDNAGSKDPAEYKTRSENMDMTLDGSSQSGR PAKKTGVISCRLPTELKTAAEALAAKNNVLLSHLLREFLEETVRQDDPFWWRKGEKKTK >gi|319805313|gb|ADMF01000011.1| GENE 36 38083 - 38775 172 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154150092|ref|YP_001403710.1| ribosomal protein L32e [Candidatus Methanoregula boonei 6A8] # 55 226 104 246 246 70 38 2e-11 MAIIKIKTKIELSEKELTGFRAAIEKMGLAPEEAVKLFFNEAVKLLAEKYSVTPQKKMKV EQVAAKPSKAVKAQKKAVEKAEEKSVKTPKAPAAKKTAAKEASVKKAAAKTEQTAAKPAA KAAAQTAEKKPVKPAVKKAAPKTVKALAQTEVKPEVKAAAAVKAPAKAEPAAKKPAVRKA PVKKPAVKTAAKPAATPAAKPAAKPAAAAVKTAEEKPAAKPVVKAETPKA >gi|319805313|gb|ADMF01000011.1| GENE 37 39127 - 40890 1577 587 aa, chain + ## HITS:1 COG:STM4409 KEGG:ns NR:ns ## COG: STM4409 COG0729 # Protein_GI_number: 16767655 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 2 587 1 577 577 644 53.0 0 MMPSIRLSAVFVGLFCIVLGATAVHAADAFSVKVEGLQGDLKSNVEAQLASMGIGSITIE GRYRARVRSGVRTGLRALGYYDPQLKFSWGPKPAEGSRNPRELTVVVTPGDPVKVMGAEL SLEGDAANDPDFAALRKNLPKKGSVLNHGEYEDFKKSVQSLATRKGYFQGRFTKNELGVS RELREAYWRLAYDSGPRWHFGPVSFAGGQIDTDMLEPLVPFKDGEPYAAPKLAQLNENLA DTGWFSSAVVAPNFKQADVENHIVPMSGALTPRKGNIIETGVGYSTDAGPRFTGKWEKPW VNSRGHSLSLASTVSGKEQTMDASYKMPLQKSPLEEFWLAQGGLKHTDLNDTKSMQTSLA ATRYWNMEDGWQRSIGLHWLIDNFTQGDTDATTMLIYPTIAFNRTRSRGGSMPMWGDSQR YSLDIARDLWGSDINFWAFNAQGAIIRSYAARHRLIGRYAFGWISSSSFDEVPPDMRFFA GGDRSIRGYDYKSLSPRDASGDLRGAKRLLTASLEYQFNVTGSWWGAAFVDTGEAVDRLD STHFKTGAGLGIRWQSPVGPVKLDIARPIGDPDHKGFAFYIGLGPEL >gi|319805313|gb|ADMF01000011.1| GENE 38 40894 - 45432 3229 1512 aa, chain + ## HITS:1 COG:ytfN KEGG:ns NR:ns ## COG: ytfN COG2911 # Protein_GI_number: 16132043 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 839 1512 602 1259 1259 558 44.0 1e-158 MSTKTTDPKTNVPKSAEKRRRPMLRFALWTFIGTAGVLTAAAGGAAWLAGTESGRSAALH LAVRFVPGFEAQAISGPWDDLTVKGIGWMSAGISAKIDELHLGWDWRALFEHSLHVTKLE VVGADIKVDTTALPASKDVPADDAAGLPDLQLPFSVILEQAALRQIRTEIDDLRLTVGEF TTSAELIHGELRLPEIAYNDVMIEAPAFSLSSNAFKATEFQFGGSAATVNAIHLTGGRVS LLKGSEEPPAAEAKALKADELPTASGSLAQANASSAAALQGFAQALDEMLQKPFVTKLPA VAVPLDAKLTSLVVTDWQIAGLSADQALPGLVPLVLNKAEIKNASVQKDGSLSVEAAAID SSVLSISASAEAKLADAWPLSVHLEARADAEPWGKLLDIRFKSPQSTLVMDLSGEVIGEL KLAGSAAGAVDLAFSLSADPSKPYLPFNASLTSSELLIPALAVKQTAQSAAEAKGAVPPD AASAAQSQKDKIAQLQEAGAAQASADASEALKNAFWTIRDLAFHAGGDARKYSFTLSGKP EVSASQAILAGKKTFAGVIDAALSGTLSGARIDRFVAETPLGRLEAAGSAEWPKDLDWSG TLKADNIDLGGWVVSFPLKLVAEASGKGSLTTAGNFAFSAKSQVKGAIGKQNTPLELRLA AAGENGLNWRMDDFYVLLGRNTASAAGSIEELRGVKLDMKLDAPGLLNTIPGLSGRAKGD VHVDGSLANPVILADLKAEKLAYNDIFVLEQFGLYADLRNSPNPDADVERLKLKAFTAYK RPVQKSSPSVSAAPAEASAAVKTADTSAISSRMPPGRLVPPKAGSSAAEKFDFIVRSLSE GEVVGKLLLNLKELTAPGVNMPQLEVSLQGRETAHALKLMLDGEPVSGSVALTGGFSRDT LDWTGRLTRASLTTPAGGWSNASPADMTWSTAKTQATIAGHCWKHDDAEVCAPKTLVLGR SGEAELRLTRLSMSVLKPYLRRKSDTLEGALTGGVRLKWDLDNGRMPEGMADLNGDGLAY STRWQGVRIPVELERLRAHALLSEKRVALAWDVKPKGNGSIWGEVGVIDPMKTRRLEGRF GLTGVTPSFIQPFLSKGEKAEGVVNADLRAGGTLIKPELYGSAALEDVVVNADLVPFDME PSGLELRFNGRSSTLTGEVRSLANLTGKTNSSDRTLQKIELSGSASWESLTDWHASARVK TDGLRLTLPPSIRLDVKADVKTEADPKSASASGSVEIPSALIEINELPASAVAVSDDQVM LDANLNPIAAKTESLPIRADVDIVIGEKDVRVKAYGLDASLSGKLKFMMGGGRMGLLGSM NIPRGRFRAYGQDLLIQTGEFLFSGPMANPSIRLEAIRNPESTEDDVTAGIRVTGTADEP VVQLFSTPSMSDEEALSYLLRGEGLGSEDGSSSAMMTSMLIGLGTSQGGGILSEIGDAVG LSGVGIDTAGSGESQQVVVSAYLLPGLQVKYGVGIFDSLATLTLRYRLMPRLYLEAVSGV NQALDLLYRFEF >gi|319805313|gb|ADMF01000011.1| GENE 39 45519 - 46058 679 179 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLHTLAALLASTIAAAAVAAPSTATSTLPPGVKDMSPDQIDYNLQAIDAAAKEQQELAR QKEAARAAAQAAAQEAAAKEKAAAEKRAAAAARAKAQQQAAAAKEKAARQAKLDAYEDKV RELELQMKELDVTERRAQVEGTVSDAAARSELSREKAQVELDRMKAEVEALRGQMKTAQ >gi|319805313|gb|ADMF01000011.1| GENE 40 46093 - 46617 730 174 aa, chain - ## HITS:1 COG:no KEGG:Tola_2807 NR:ns ## KEGG: Tola_2807 # Name: not_defined # Def: 17 kDa surface antigen # Organism: T.auensis # Pathway: not_defined # 3 167 2 163 170 91 41.0 9e-18 MQKKVSVIALSLAATLALAGCANDGTRYRADTYYAGQVNQVQEVNTVQIIAVNAARVAVP NDDNRDTARMTGAILGAIAGAAIGNHNNHSTSARVMGGLAGGAVGGLAGDAVGGSSSTSY TDGVQIVFRTASGKVLQSAQVGRPCEFKTGTAVMVSPTPNEARIQPNNPYGCGR >gi|319805313|gb|ADMF01000011.1| GENE 41 46843 - 48078 1168 411 aa, chain + ## HITS:1 COG:BS_yycB KEGG:ns NR:ns ## COG: BS_yycB COG2807 # Protein_GI_number: 16081100 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Bacillus subtilis # 21 398 15 380 402 145 31.0 1e-34 MTLLSDASAQKTSSQALMPALIALLLTAFVMRGPVTGVGPVAAEVVAAYGTTWSLYGMLA ALPVAAFGLCSFLAPALQARLGLCGAASAALGLLLLGTALRFIANLAAFAGGMFLLGAGI ALLNVLMPVVIKTRWPRRIGMLMGLYTGMIGLSGAVGGLTAAPLFAWGGSLSWPFGFWTA AAVLALMVWLLLMQCGTQGLSNESPCSASKPAADKQRPQGLLRRTMRMPLAWILTGVMGL QSTLIYTAAAWMPSYWRAQGMSFETTGIWIFVFLFSGLPASVMTAKFFKVCPNDRTAGAV LTLLYVLGLAGWLAGGAWLLPASVAAGAAQGAMLSAAFLLMASHTKGSQAMLAVSTLSQG IGYLAAGAGPFIFGRLLQATGGWTAPFVFFTAVILLWGLCVRLADTHQTID >gi|319805313|gb|ADMF01000011.1| GENE 42 48242 - 49510 1526 422 aa, chain + ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 7 416 8 425 432 295 45.0 1e-79 MTWSMGVALVVTIGAIAALIKRYETRLVLLSAGILMALLSLEPMTAFKQFDKSMTNATLI IAICSAMGFASVVSLTKCDVHLVALLTKPLKKLGLMLLPACMLVVSLISIAIPSTSGLVA SVGPTIIPLMIRAGFHPAIAAASVVGSITLAYLSPGVSHNAFVAKLADITIMDFIGRWMP VTVGATLASIVLMVIVCVVYRDFRREGFSQVDGAESKQSDLPENPNVLFAIAPLLPVVIL VCASIWAPQLKMSVATAMLIGAIYAIAVTRTSPAEVTKKFFDGMGRGYASIIGIIIAAGV FAAGLRACGVIDAFVNYLTHANEVAKLGAALGPYLMAIVTGSGDAATFAFNEAVTPHAAQ FGMSIDSLGYLAAISGNFGRLSSPLAGGMIIAAGLAGVSPFEIVKRTAPVMFICLVGVYF LG >gi|319805313|gb|ADMF01000011.1| GENE 43 49952 - 51637 1870 561 aa, chain + ## HITS:1 COG:PAE1423 KEGG:ns NR:ns ## COG: PAE1423 COG1966 # Protein_GI_number: 18312627 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Pyrobaculum aerophilum # 1 515 1 501 618 265 34.0 3e-70 MNGLTVMLIALVALACGYFGYARWLEKTWGIDPNRPTPAVENKSGDYAPANKWTVFAHQF TSITGAGPVTGPIIAAMFGWLPALLWMLIGGIFFGAVQDFTALYASVKNGGRSIGMIIED YIGRTGRRLFLLFCWLFTLLVIAAFCDMVANTFNGFAKDGSQIMPNAAAGSISLLYMFVA VLFGLYLKKFRPTAGIQLVVGIVLMCLMLWVGIANPIYLDSVTWRYVVFAYLFAASVMPM WLLKQPRDYLSMFLLIGMIVCGVLGVFVKNPTLNMPAFVGFEVKNLDLFPILFVTIACGA VSGFHSLVSSGTSSKMVANEKDMRLVGYGSMCVEVVLGIVALIIVCAAASNGVLPAGTPF QTFSGSVAGFLTDIFGVPTDIAACILTMCVSALALTSVDAVARIGRMSLQELFTPGPGEA MGPIQKLFTNTVFATILTLAMGYALCLAGYMSVWPLFGSANQLLSALVLTGLAVFLKATG RKGWMLYGPMTVMFVVTMTALIQACLRIFRSMADGSFVFMVGGLQLIIAVALIILALLVV YHCVMKLREPSPAADAAAKQA >gi|319805313|gb|ADMF01000011.1| GENE 44 51826 - 52239 372 137 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQFILSTLLTALPAILPVFVLMCARIWPMRFRAQKVLMAAAFLCYAEALAAFALHAAEIA GGAPAFFNAFYGSPSVMTPYAMAGYAGQCLAVFALMLIVNWRAMVGYFSDEPQTKAAKPP ETEKKAAPAENSDTGKK >gi|319805313|gb|ADMF01000011.1| GENE 45 52313 - 53269 971 318 aa, chain - ## HITS:1 COG:AGc3663 KEGG:ns NR:ns ## COG: AGc3663 COG2207 # Protein_GI_number: 15889309 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 24 299 10 290 301 188 38.0 1e-47 MTQTAEILKTPTSAAPESIEKCAELAQLVERFVDTKGEYDERIPGLHMSSLKAPISTPNC FYVLSVGMILKGSKRLLIGGKTYDYEAGSMLVTSIDLPTSYEIGAVSKDNPFVSLSLKLN PAILAELLAEDVSTLKPGEPYGFDAAPEELIEDFERLLRLLDRPAQIAARAPLLIRDIHY LALTSAAGNSLRSLYAPGSTGHRIRQAVKWMRENFRETITIEQLAGIAHMSPATFHRQFK ELTSFTPIQYQKRLRLYEAQQFLMRGDGDVNSAAFAVGYVSPQQFNRDYKRFFGDAPGRV TKSFKQSLRDRLSAETDA >gi|319805313|gb|ADMF01000011.1| GENE 46 53309 - 54175 692 288 aa, chain - ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 8 287 17 296 297 304 53.0 1e-82 MTPLQIPSATLANGVTMPRLVFGTYQIKDPKICQKAVEDALEAGYRAIDTAQSYGNEAAV GAALKACGLPRSELFITTKLWVEDASEAGARRAALRSMELLGLDYLDLYLIHQPVGDVFG AWRTIEALYREDLLRAVGVSNFSPDRLMDMALSSTIRPQVNQVEINPFCQQKDALPVMAS LGILPEAWAPFAEGRNGLFSNAVLAGIAAKHNASIAQIVLAMILKMGAVVVSKSVNPERM RENIRAAEVLLDQTDMTAMAALDTGRSQFFSHRDPEIIKWFHSRHIEH >gi|319805313|gb|ADMF01000011.1| GENE 47 54192 - 55271 926 359 aa, chain - ## HITS:1 COG:no KEGG:Pden_3235 NR:ns ## KEGG: Pden_3235 # Name: not_defined # Def: hypothetical protein # Organism: P.denitrificans # Pathway: not_defined # 29 357 25 353 353 412 58.0 1e-113 MTVFRKLRLNAVFLGISALLMGSGAAAFDPITIVDQQSFAAGGKVETAPGTFEANRPTEA GQSIHGDHAYFFCQKPADAKPLAMTFLHGAMQFSKTWETTPDGREGFQTIFLRKGWQTCV VDQPRRGNAGRALADAEIKAAKNDQTLFGMFRLGLWPKFYDGVAFKQDAAVLDQFFRQVT PNIGPFDAEIAAAGVAAGLEKTGPTVLVTHSQGGGVGWLIAMQNSNVRAVVAYEPGSGFV FPKGEAPETMSSSFGPLSADEVPLETFKKLTRIPIVVYYGDNIPRSPSPIPNADQWRVRV DMARLWVDAVNRHGGDAQLVMLPDVGIKGNTHFPFSDLNNQEVAEQLSQWLHAKHLDRS >gi|319805313|gb|ADMF01000011.1| GENE 48 55300 - 55920 517 206 aa, chain - ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 45 202 5 174 179 83 27.0 2e-16 MKELFEMLNGLSNRKLNKRSFLAACGAVAAAAAISAPSASAASPNERRIAVIYFSKTGHT QSLAECISDMTGAKLFRVETVDPYPEEYRETTEIVKAEIENDIARSIKPLQINLDEFDLV ILMTPTWWHHVARPLQTWMESAKLADRANLLILTANTHGGGGRMHTREDFEKWLPQSRLG THFTVFGGVSRKDRDVRRWLEENKVL >gi|319805313|gb|ADMF01000011.1| GENE 49 55933 - 56436 451 167 aa, chain - ## HITS:1 COG:AGl997 KEGG:ns NR:ns ## COG: AGl997 COG1917 # Protein_GI_number: 15890615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 28 157 20 149 151 129 53.0 2e-30 MKPALTRAACLLCAAFASLTAPAASAASQTILRAAEQQSAPVNPANFTGAARSDGAFRQQ APARVYGGWVTFEPGSRTHWHIHPLGQTLIVTFGAGLTQVEGGPVREIRAGDIVICPPGV KHWHGAKPNQAMQHIAIGERAENEQVQWLEEVSDEIYLQPIQATSIK >gi|319805313|gb|ADMF01000011.1| GENE 50 56527 - 57597 1325 356 aa, chain - ## HITS:1 COG:YPO2002 KEGG:ns NR:ns ## COG: YPO2002 COG1073 # Protein_GI_number: 16122244 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Yersinia pestis # 29 355 40 363 363 392 63.0 1e-109 MTTLKKIAAAVCAAACIASVSAAPDDISKLNPYGLVYQGAVKTNTAGEVNIHPVTYSLHG IKIAANVYTPANYDAKQSYPAVVVAHPNGGTKEQVAGLFAQRLAELGYITIAADAAYQGA SGGEPRHTDKPQFRTEDIHGMASYLLSYPGVDASRLGALGICGGGGYTLNAAKSDKRFAA VATISMFNTGLVRRMGYMNSAADTVQERLKAASDAHAAEMLKGEAPLSGTVDFDAISPEE AAKIPNDLYREGLEYYGRTHRHPNATFSYTTSSLMDLMTWDATDQIELINVPLLMIAGSK ADSLYMTQDAFAKASGTSDKELYEIPGATHIQTYYVPEYVDQEVAKLSEFFGRTMK >gi|319805313|gb|ADMF01000011.1| GENE 51 57635 - 58390 698 251 aa, chain - ## HITS:1 COG:XF1766 KEGG:ns NR:ns ## COG: XF1766 COG0599 # Protein_GI_number: 15838367 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Xylella fastidiosa 9a5c # 34 251 39 260 260 161 45.0 1e-39 MRYEMKPTAPSFAGLSQKCKLTCAAAAAGLLFAVSGTQAQALTPKQESIIPIAALTAEGD AARLKTVLADALNRKSMTVNEMKDVLLQMYAYTGFPRSLTGLGVLVNLLDERHAAGITDE KGREATPLPAGTNIRELGTKTQTELVGRPVKGPVYDFSPEIDTYLKEHLFGDIFSSDLLT HQERELATISALASLPAPVQLRSHLNASLNVGLSPKALREFTEILRRDVGSTEAALAQTT LDAVLAQRAAK >gi|319805313|gb|ADMF01000011.1| GENE 52 58733 - 59986 920 417 aa, chain - ## HITS:1 COG:STM0394 KEGG:ns NR:ns ## COG: STM0394 COG2814 # Protein_GI_number: 16763774 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Salmonella typhimurium LT2 # 8 391 7 390 390 242 36.0 1e-63 MIPRHVPALALGTLALGVAEFSMMSILLPVADDLGVTVPEAGHFISAYAAGVCAGVLIMA AAARKMPLKTLLLIIVGIITLGNTLTVFVDSYHLMLFSRFIAGLPHGAYFGAAGVLCTQL AEPGKASRDMCLMVAGMTIANLAGVPLASFLAWAVSWRAAFAIAAAAALITFAAIRITVP KVPALPDSGFAAQFRFLRSLEPWLVLGAIGLGNGGFFAYYSYVNPVMEHVAAVPASMMSV VITLAGAGMVLGNLFCAKISSSFSDESLAAAGQGVLLLSLASVFFLAHWSPAAIALTTLA AGCVFFISGPEQVLMIRNAKEGQLLAASLAQVSFNAGNAVGAWLGGLPIDAGKAANWAAM PGFFLAPRGLVFFLSTGLFTECAKRNAPLAASLHLKIRSSQKRLRKAHCADCSPPNP >gi|319805313|gb|ADMF01000011.1| GENE 53 60278 - 60526 244 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSVSEIRTLIKERPGISLRDLALHFRVSPGMMEMMVSKLVDRGDVETVVPTSCCGGDCG CSSEDHGKHYKLTLKAFREMEA >gi|319805313|gb|ADMF01000011.1| GENE 54 60805 - 61332 447 175 aa, chain - ## HITS:1 COG:VCA0800 KEGG:ns NR:ns ## COG: VCA0800 COG3045 # Protein_GI_number: 15601555 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 5 160 1 151 160 194 66.0 7e-50 MKSKIFQSLKTTAAVSCALFGAALLTACSDGKKVGDVSLGFLTFKNIQIDAFIDPQVPGV TCHAASIESPLTLADPSDSSVSCRQTGEITQAMIDAIDKSKDGEVIFTKSKSIFFKYMKI RRIYDAENQTLLYVSYSTKETSGSFKHSLSTVPLWGTEAYKKPLPPLGDANQQKF >gi|319805313|gb|ADMF01000011.1| GENE 55 61472 - 62728 578 418 aa, chain - ## HITS:1 COG:Z3664 KEGG:ns NR:ns ## COG: Z3664 COG0675 # Protein_GI_number: 15802939 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 EDL933 # 1 396 1 395 402 337 44.0 3e-92 MIRHKSFVFKLKPDGATRRSLAKACGCVRFVYNKGLDWNKEQREKDQTFRVNYPKLCALL PEWKREFPWLGECHSQVLQQGMKDLMTAMVNFFEGRSQFPRFHKKFKDEDSIRFPQRFKV DEVRRQIYLPKIGWLGYRRSRFINGKLRSVTVMRKADGWYVSILTEREIEAPVHPKAGRE IGLDAGVKKTAALSNGKIYLPVDAFRSSKDKLAKMQRRLKRMVRFSKNWKKQQKKIAKLH KKIADTRRDHLQKLTTDICKNHAVVYREDLRIKNMTASAKGTLEEPGKNVKQKSGLNSAI LDQGWGILFSLLDQKMEEFGGEVFAVPPMNTSRTCPDCGDVSPLNRLTQARFCCRKCGFE GNADVVAANNILRRGQRLRACGELQSTAATQVNRPSRKRCAGQQQEPIRRDPQAPENA >gi|319805313|gb|ADMF01000011.1| GENE 56 62756 - 63163 126 135 aa, chain + ## HITS:1 COG:ECs5182 KEGG:ns NR:ns ## COG: ECs5182 COG1943 # Protein_GI_number: 15834436 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 3 134 10 142 143 164 56.0 3e-41 MTSDLRRGRHCIFALNVHLVFVTKYRRSTFTDEHLMTIRASAEKVCGDFGACLREFNGER NHVHLLVSYPPKVSISSLVNSLKGVTSRILRNKFPELETSYCKGKLWSPSYFAASCGGAP LEKLKAYIESQNRPD >gi|319805313|gb|ADMF01000011.1| GENE 57 63365 - 64348 1217 327 aa, chain + ## HITS:1 COG:YPO2806 KEGG:ns NR:ns ## COG: YPO2806 COG0667 # Protein_GI_number: 16123004 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 1 326 1 328 329 375 59.0 1e-104 MKTRRLGKNGIAVSAIGLGCMGMSHGYGPARPIEAMKALIHEALDQGVTFFDTAECYGPY ANESLVGEALEGLRKQTVIATKCGIEIVDGKQRLDARPETIRRSLEGSLKRLKTDYVDLY YLHRVDPKVPVEEVAGVMAEFIREGKIRGWGLSEAGVKTIARAHAVCPLTAVQSEYSMMW REPEASVLPLLKAEGIGFVPFSPLGKGFLSGTIHADASYGADDFRSIVPRFQPENLKANE RVVDLVRQTAQVHGATPAQIALAWVLAQGDFIAPIPGTTKSARLRENIGAADVVLSPEEL AVLRSALDAMPIAGDRYPPELAKRVAD >gi|319805313|gb|ADMF01000011.1| GENE 58 64512 - 65675 1242 387 aa, chain + ## HITS:1 COG:ybdL KEGG:ns NR:ns ## COG: ybdL COG0436 # Protein_GI_number: 16128583 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 14 382 18 386 386 241 35.0 2e-63 MITLSDRSSTFTDSVIRRMSRVCAKYGALNLAQGFPDYNPPEPILERLSKVAFEGPHQYA TTWGAQNFREALCEKVKHFSGLEYDPNSEVCVTCGGTEAMMASVLATINPGDKVAIFSPF YENYGADAILSGAQPIFVPLKPPSFDFDPEELRAAFRQGAKALILCNPSNPSGKVFTREE LLKIAEIVKEFDAFVITDEVYEHIIYKPNVHTYFAALPGMRERTIVCNSLSKTYSITGWR LGYVLGPAEALDRVRKVHDFLTVGASAPLQEAAVVGLKFGDDYYEELQAEYTHRREVFLS GLDGLGLKYFRPQGTYFVLVDISEFGYDDDYQFCLDLAEKVKLGAVPGSSFFREPVHRYI RFHFAKGDDRVLEDAISRLSKIHLLQK >gi|319805313|gb|ADMF01000011.1| GENE 59 65757 - 66767 1077 336 aa, chain - ## HITS:1 COG:SP1872 KEGG:ns NR:ns ## COG: SP1872 COG4607 # Protein_GI_number: 15901700 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 31 334 41 320 321 93 27.0 4e-19 MQISRRRLLVVASTASFVGFSGFSLKALAAELTLPSVGADKKFSAVPVPADPKRLAVLEY SVIENLQVLGLSDRIKAAVQTRNLPWLTALPADCKLVKSVKSVDIETVSSAKPDLIFISG RISRNIDAFKPIAPTVCLIPNKAEGWKSFRGNFLALAEVFGKKADAEKQLKPLEKRLSAL RNKAAGERIAVIMMVNGRMMAAPAGGAAAHLGADFGFTNVKPKPAQPAAPRKAPAPGEKP AAPTPAEIAASNAKTIAELAALKPHRIFVLNKDEAIGMPEPNTLAKAVADQPEWAKLDAV KGHRVHELTHAAWYLADGGILSMDKMLADAERALGL >gi|319805313|gb|ADMF01000011.1| GENE 60 66784 - 67746 1158 320 aa, chain - ## HITS:1 COG:BH1028 KEGG:ns NR:ns ## COG: BH1028 COG4607 # Protein_GI_number: 15613591 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Bacillus halodurans # 49 316 67 328 329 166 36.0 7e-41 MNATRRTVLIAGALSAITALSFSSAVFAASDLVEVQSLNAANKPITVAVPKNPQRVAVAD FSVLDTLDHWGLGERIVALPQTTALPYLPQYFKKSKKVTNLGTLKEIDLEGLMAAEPDVI FISGRLAKKYDELSKIAPVVFMTADHEKGTFKSFSDNLMNLAKIFGKEAAAQADIDHFTG RIDRIRAASAGKTAVVGLVTSAHFNLLGNKARCALIGNEFGFQNVAQNANANHGNEASFE LLLKLNPDYIFVLDRDSAIARPGAKVAADVMNNELVARTKAKAEDHIVYLSAASWYLADG GYTSMNLQFQDIEKALGLTK >gi|319805313|gb|ADMF01000011.1| GENE 61 67836 - 68591 258 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 226 278 510 563 103 30 2e-21 MLSIKNLTKTYEDAAVVDDVTIDLPPGKVISLIGPNGAGKSTVLGMISRLIARTAGIVEF KGRDITHWESRELAKHLAILTQANFVQMKLTVRELVAFGRFPHSGSALSADDWTKVDQAI HYMELEAFANRFIDEMSGGQRQRAFIAMVLAQDTEYVLLDEPTNNLDIYHATQMMKLVRR LCDELGKTVILVLHEINLAAFYSDVICAFKDGRIAAQGTVDEVMTPENLKRIYGVDFEIH RIDGKPLAIFH >gi|319805313|gb|ADMF01000011.1| GENE 62 68626 - 69669 1399 347 aa, chain - ## HITS:1 COG:BS_yclO KEGG:ns NR:ns ## COG: BS_yclO COG4605 # Protein_GI_number: 16077449 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Bacillus subtilis # 35 346 2 311 315 207 36.0 3e-53 MTSDTFTANPLKTASSSEAAAAASSLKIQRSRRRRMLTRLGCLIGLVVLFAALYQFAFVN PKFFSYAMSIRLPRLIVLLTAGTAISAAAIIFQTIIRNNIVTPCLLGMNSLYLLIHTGVV FFLGSGSEFATNPVYAFAVDIIVMGTAASFIYYSIFQKTGGNVLYVLLIGTVLTTFFSSM QNSLTRIMDPNEYDALLNSLVASFTNVNAACIIPGIMLLALLAWWLRRDLSILDVISLGR EQAISLGVDYETTLRRLMVGVALCIAVATALVGPLSFLGLITANVARQMFTTYRHTYLIA GASLVGMLVLAAGQFIVEHVMVYSVPVSVFVTIGGGIYFLYLILTQK >gi|319805313|gb|ADMF01000011.1| GENE 63 69666 - 70700 1165 344 aa, chain - ## HITS:1 COG:BH1025 KEGG:ns NR:ns ## COG: BH1025 COG4606 # Protein_GI_number: 15613588 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Bacillus halodurans # 8 318 6 316 317 264 45.0 2e-70 MTRSTCILLVLLTLMSVLSLFVGAADITPADVLSGDIESLELMLISRLPRLLAILCTGMG MSIAGLIMQQLCANKFVSPTTGATISSAQFGILIALLFFPDSTLWSRALFAFAAAILGTW TFVWFILRMPMKDPVMVPLVGIMFGNVIGGVTNFLAYRFDMTQALSTWLVGHFSLVLRGN FELVYLVLPLIVLAWIFAKHFNIVGMGRDFSKNLGVNYTLVLFSGLTIAAMITAAIVSVV GSISYIGLIVPNLIAIFKGDDLRSTLADTALFGALFVLCCDVIGRLVIAPYELPIELIIG TIGSLLFIALIFYRLRFGRMSLDKKQLLRLFGLDRRTPACGGAK >gi|319805313|gb|ADMF01000011.1| GENE 64 71459 - 73063 1640 534 aa, chain + ## HITS:1 COG:Cj0755 KEGG:ns NR:ns ## COG: Cj0755 COG4771 # Protein_GI_number: 15792094 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Campylobacter jejuni # 29 525 25 516 696 249 33.0 7e-66 MQHHKFLAALPLALAVSAAWAADDGYTTLDTSVVSASGYAQDTREAPASITVIDAKELMT KPIGDIGTAVSDVPGVDITTTKMGTSQIYIRGFSSDYTLLMVDGRRQNSDSAMNSLNGFE AGGIFMPPPGAVERVEVMRGPASTIYGSDGIGGAVNIIMKKHVNQFTGSLSIDRTQFTDS DWDDRWSAGAYLGIPLKEGVASLLLRGRYFDREKSNLHEPSGGYASHSPSDGYTGNIGGR LNLSPNEDNDLYLDVDYTHFKGGTMSTSQAGYEAHRWFDKYAVVVGHDGRFSFGDLSTYF QFQGLDLIKTKTGPATRTDGVNPGMLATANKTTKGSLSDPLMSSKHYVFATKLKTPVSLD GYGDMVVQTGLDVDYSTFKDNFNEGTEITGKTLDQTQIAVFGESEYFINENWIATVGARV HWSDIFDFHFAPRAYLVWKPAEAFSIKGGVANGYRTPEARQLTDGAYSVSVRGAPNHTYG NPDLKPEESWNYELSSTVKLGQAASVTAGVFYTDFKNKIDTVKINYVNDSNYDP >gi|319805313|gb|ADMF01000011.1| GENE 65 73086 - 73511 340 141 aa, chain - ## HITS:1 COG:no KEGG:Ppha_0277 NR:ns ## KEGG: Ppha_0277 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 8 140 437 568 570 142 53.0 3e-33 MKSRIPSTRLKAYRSREKIEELFATYKDSFDGRKPRTWYPENLYGRQFAQFVGLGYHCFL AKRILDVKKALSEKETEGKTKEELSLEAKLLAWLNQHSLIQILDWFRCVDYVAATGNASA SKWTTETTRRDQLFLKMLGVK Prediction of potential genes in microbial genomes Time: Sun May 29 19:28:25 2011 Seq name: gi|319805303|gb|ADMF01000012.1| Sutterella wadsworthensis 3_1_45B cont1.12, whole genome shotgun sequence Length of sequence - 9167 bp Number of predicted genes - 10, with homology - 8 Number of transcription units - 7, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 338 152 ## Ppha_1041 transposase IS4 family protein - Prom 359 - 418 3.6 + Prom 320 - 379 3.4 2 2 Op 1 . + CDS 402 - 560 57 ## 3 2 Op 2 . + CDS 557 - 964 434 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Prom 1265 - 1324 7.0 4 3 Tu 1 . + CDS 1448 - 3559 2105 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 3609 - 3658 10.3 + Prom 3612 - 3671 2.0 5 4 Op 1 30/0.000 + CDS 3700 - 4125 628 ## COG0811 Biopolymer transport proteins 6 4 Op 2 11/0.000 + CDS 4128 - 4520 434 ## COG0848 Biopolymer transport protein 7 4 Op 3 . + CDS 4480 - 5484 891 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 5521 - 5572 10.8 - Term 5514 - 5554 0.4 8 5 Tu 1 . - CDS 5605 - 6534 690 ## COG0583 Transcriptional regulator - Prom 6565 - 6624 3.5 + Prom 6521 - 6580 8.3 9 6 Tu 1 . + CDS 6680 - 8521 2253 ## EFER_3637 putative arylsulfatase; possibly exported + Term 8580 - 8611 3.2 + Prom 8745 - 8804 7.8 10 7 Tu 1 . + CDS 8837 - 9167 260 ## Predicted protein(s) >gi|319805303|gb|ADMF01000012.1| GENE 1 2 - 338 152 112 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 112 1 110 570 129 57.0 5e-29 MGRPLTGKTHVGIRRETRSNGDVYVYERVTGYDPKTQKTKTLSTRLLGKILAGSTEMIPT RPKKKRSEVIEAPVQAVRTHVGLQKILEWAGHESGIDADLQRSFEIGDALKL >gi|319805303|gb|ADMF01000012.1| GENE 2 402 - 560 57 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYFTDFSIKTSFSLEYRDGFERLLGYDAQDVNFGKVTAKGSNCSSKLRLSME >gi|319805303|gb|ADMF01000012.1| GENE 3 557 - 964 434 135 aa, chain + ## HITS:1 COG:AGl1858 KEGG:ns NR:ns ## COG: AGl1858 COG4771 # Protein_GI_number: 15891046 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 135 573 707 707 59 30.0 2e-09 MSFKGGYTYTHAEIEGGVNDGLRPNSMPRHSINARADYDNGGLNVFVKALAKLDAMSEQI STGRGGSAATYSSTKYKNYTQVDIGVNYTFEKQHHFSAALNNVFDKGLEYDADGSNLYRE FFDGRNVWLGYTYTF >gi|319805303|gb|ADMF01000012.1| GENE 4 1448 - 3559 2105 703 aa, chain + ## HITS:1 COG:Cj0755 KEGG:ns NR:ns ## COG: Cj0755 COG4771 # Protein_GI_number: 15792094 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Campylobacter jejuni # 33 703 25 696 696 308 33.0 2e-83 MTYRRTSLILLPLAAAVSAAYADDGGQTAYTTLDTSVVSAAGYAQDTSEAPASVSVITEK ELASKPITDIGSAVGDVPGVDISQNKMGAADISIRGFGSNYTMILVDGRRQNTSESMVNN GFDPGRIFMPPVGAIERIEVIRGPASTIYGSDAVGGVVNIITKKHVDQFTGTISIDRTQF QNDDDYGNRWGTGVYLGIPLKENVASLLLRGRYLEREASHLKRPNAKAGENPYATHSPTD GFTGNIGGRLNLTINESNDVYADLDFTRYKGGAMNSSKKSVQTYYWWNKYNGVVGHKGVY GIGTLESYVQYNALEQVKSFSSGLQGNGPWTTKKGSPMMASRTWTAATKLVSPIELGSAG SIMLSSGLEANYETFEDANANSHTVLGGKTLDQTTLAGFMEGEYFINDEWIATLGGRVHW SDIFGAHLSPRAYLVYKPAQFISFKGGVANGYKTPQIKKLADGIYSYSEGSGNSLGSVSY GNPDLKPEESWSYELSTTLKLADAANLTVGLFYTDFKNMLDTRDIADVTIDGDTFEAKQD INHGKVTAKGLEVLLNTASFHGFRFTGGYTYTHAEIKEGDLSDRGGNWPKSKRPNELPRH SLTARLDYEWNDFSAYVKSVSKFDSEQQNTKGGPDLDKYKNYTVVDLGASYVFKKQHRFS VAVNNVFDTGFKWVPNAKGDGFANAYKEYIDGRNFWFSYAYSF >gi|319805303|gb|ADMF01000012.1| GENE 5 3700 - 4125 628 141 aa, chain + ## HITS:1 COG:Cj1628 KEGG:ns NR:ns ## COG: Cj1628 COG0811 # Protein_GI_number: 15792933 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Campylobacter jejuni # 1 141 1 141 141 162 56.0 2e-40 MEFLKESVDYAIFFILGLMGFVSIWLTIERVMFLRKVNPSDYPTKDEYDAALTNNLTTLY IIYSNAPYVGLLGTVIGIMITFYDMGQSGNINASDIMTGLSLALKATALGLTVAIPTLIF YNGLQRRINVLSTRWTERRGA >gi|319805303|gb|ADMF01000012.1| GENE 6 4128 - 4520 434 130 aa, chain + ## HITS:1 COG:Cj1629 KEGG:ns NR:ns ## COG: Cj1629 COG0848 # Protein_GI_number: 15792934 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Campylobacter jejuni # 1 127 1 127 129 108 48.0 2e-24 MIEIPKKEPLNIVPFIDIMLVLLAMVLSISTFIAKGEIQINLPKSKTADVPKEAPEQRIV QVDAMGDFFLDSQKLSFEELAQAIANLSREQPVLLRVDKDSTFDHFIQVIDLFKANNHEN FRIATEKEGR >gi|319805303|gb|ADMF01000012.1| GENE 7 4480 - 5484 891 334 aa, chain + ## HITS:1 COG:Cj1630 KEGG:ns NR:ns ## COG: Cj1630 COG0810 # Protein_GI_number: 15792935 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Campylobacter jejuni # 164 334 56 224 227 72 31.0 1e-12 MKTSASPQRRKDAERSALSFVLAACVYLPILWGVFWAAPALTYTPAGQMAAVSLSFAQFS GGSAAAEEAPEPTPATAPEPAEEAPPPEPEPEPAVEPEPEVKPDPEPEPEPIPEPEPEPI PEPEPEPIPEPEPEPIPEPEPEPAPAPEPPPPPPEPKPEPKPEPKPEPKPVEKPVEKPKP VKKAVKKTEAPKPVKAVQATVKGPEVKPAAAPAAPAGPAPVQSAGAPVSAGQEGISELVY GQTTDPFLAEVKRAVESALHYPRKARMFHIEGTAVVQFIVDSNGKLTELKIFKSAGHPLL DKAAMRAVADAESNWSQPKGTVRLRFPIQFKLQS >gi|319805303|gb|ADMF01000012.1| GENE 8 5605 - 6534 690 309 aa, chain - ## HITS:1 COG:PA4902 KEGG:ns NR:ns ## COG: PA4902 COG0583 # Protein_GI_number: 15600095 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 305 1 292 298 93 29.0 5e-19 MSSPELNHSLIRLLITLYRTGSLRAAAEALRISTPSASYVLSHARDLFGDPLFRRTNTGM APTTRMAELMPELEALAAGMDRVLAGDVKIFSPALSQMRFRIACFDNFIPLMLGPAVQRI RKAAPNLKMELTPQTEGVIEDMRRGHLDFCLRANATLPGDFHSLVAARSNFAVLAAREHP LVRRAMSGEQITRADLAPFAQLQIRVPLQTKGVTRPLSFEKDEDSVKVFLSTQSFLGPPL LLPGTDLLLVLPRPTAAFWVNFAPSLAMFDVAEFSETPFTARFFWHERVDASPQHQWLRG IFAQAADNQ >gi|319805303|gb|ADMF01000012.1| GENE 9 6680 - 8521 2253 613 aa, chain + ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 1 609 5 609 611 737 58.0 0 MKLNFHPTRAAVLVGAALLSATFAFPAMAAGGASGPKVAYMAQGNIGEVMVNPYRIAPLT AVIRSGGYVVKKASVRIVPKQNGQEIRYSVSDENVRTAGGIPVFGLYPDWLNTVEVEYDR VFNGKTEHFSDRYQLYAAPVFLRSNGTPGQTHTTFNVKVLKMDPSFKDRLYFINNLIPTP PDASRVVWNNPMGGALEWAFGPENAIVDSTGTVRWYLNPDVEMYDPDQPYKAGIMMGFEQ TADGGLLFGYGQRYAKYDMTGREIFNRRLPMGYADYSHGLDAAQNGHIFLRVSAADHRRL DGKRVHTVRDVIAEVDQDGRVVDEFRLFEILDPYRDNVIKALDQGAVCLNIDASQAGKTL SADELAAMDKNDRFGDIAGVGAGRNWAHVNSVDYDPTDDSIIISSRHQSAIIKIGRDKKV KWILSAPEGWKGDFAKKVLQPVDQNGKAIKCEDSKCEGGFDWTWTQHTAWRVDSKSSGDV IYVSAFDNGDARGMEQPALADEKFTRGVMYKIDQKKMTVEQVYEVGRKEGHAYYSPVTGL ARYMDDKDSFVVYYSTSGLSGPSGGMKGPIKPHPYLAEYKFGSADPAVLMRFENTMGYQA WPFDVQKAFNPQK >gi|319805303|gb|ADMF01000012.1| GENE 10 8837 - 9167 260 110 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMKKASNKWYFTKETNAKGLCYIYAYQTQWDPVAKKSKRSARKYVGRLAADSVVNITAKF RTEFPQYAQGTFYFGLDKTLVDETAYRRDFPDAPGPKPAEAEIDTALWDT Prediction of potential genes in microbial genomes Time: Sun May 29 19:28:48 2011 Seq name: gi|319805292|gb|ADMF01000013.1| Sutterella wadsworthensis 3_1_45B cont1.13, whole genome shotgun sequence Length of sequence - 10656 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 8, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 649 531 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein + Term 808 - 844 -1.0 2 2 Op 1 . - CDS 898 - 2241 1282 ## COG0534 Na+-driven multidrug efflux pump 3 2 Op 2 . - CDS 2281 - 3162 758 ## COG1606 ATP-utilizing enzymes of the PP-loop superfamily - Term 3250 - 3311 2.4 4 3 Tu 1 . - CDS 3380 - 4660 1268 ## COG3875 Uncharacterized conserved protein - Prom 4761 - 4820 2.6 + Prom 4833 - 4892 3.5 5 4 Tu 1 . + CDS 5033 - 5866 488 ## COG0388 Predicted amidohydrolase + Term 6032 - 6098 31.6 + TRNA 6008 - 6083 76.6 # His GTG 0 0 + TRNA 6107 - 6182 76.6 # His GTG 0 0 - Term 6257 - 6315 5.8 6 5 Tu 1 . - CDS 6338 - 6805 626 ## COG1225 Peroxiredoxin - Term 6827 - 6868 3.2 7 6 Tu 1 . - CDS 6949 - 8307 1223 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 8534 - 8593 1.6 + Prom 8443 - 8502 3.6 8 7 Tu 1 . + CDS 8659 - 10203 1695 ## COG1757 Na+/H+ antiporter + Term 10293 - 10326 4.1 9 8 Tu 1 . - CDS 10254 - 10652 525 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein Predicted protein(s) >gi|319805292|gb|ADMF01000013.1| GENE 1 2 - 649 531 215 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 1 215 372 584 584 138 37.0 2e-31 DYGSLNKTLHLHLYRFPKADEAEMEELRLQVQQVLDLKNANKQVPPEKWLTYKRFVCERT TAQGHRYWDRDDNAIEAALRYAGRFAIRTNAEANPFKALSIYRLRGQVEQDFNQFKNWVD GNRLRCTDTAYWGKLLVCTLATSLRMMAIKGAHDREQANRKIPNNSIDCLFTILKQIQAD KRQTANAWVTRTITKKQRDMLALLGLENPPRVLKN >gi|319805292|gb|ADMF01000013.1| GENE 2 898 - 2241 1282 447 aa, chain - ## HITS:1 COG:BH4045 KEGG:ns NR:ns ## COG: BH4045 COG0534 # Protein_GI_number: 15616607 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 21 440 20 441 447 211 32.0 2e-54 MQTVSETFAGTITVNRQMRLALPRMAMSLLIMSYLVADGVLISRFVGTTALSALSMSYPL TALLIAAGFMIAAGGGAVAARALGAQKHEEALRAFSTALTTNVMLGLTLGLLAWFGLDWV FELLGITPEQTEFARDYQRVLLPATPLFLAAATFEVFYTTAGRPKAGLAASAASGITNVV FDILFMGPLDMGMTGAAWATALSWLIGAACGLWYFMREKSPLKLVLHLPDLKLLRTAAGN GLQEFVSNLSYVVAIWLYNRVFISHLGTAGVAALTMCSFTVYTFNCVFHGFCAASSPILG FKVGAKEPHQVRRVFLQSYALAGLLSLASYLLTLPFARSVLGFFSNEGGEAFELAVESFP IYSLMILMLCSNMLSSSFFAAAGDGRSAAILAFARTLIFPCIGILILPELFGTAGLWMAS PATEAAALLLSCVMFFLSRRKFGLGRI >gi|319805292|gb|ADMF01000013.1| GENE 3 2281 - 3162 758 293 aa, chain - ## HITS:1 COG:alr1286 KEGG:ns NR:ns ## COG: alr1286 COG1606 # Protein_GI_number: 17228781 # Func_class: R General function prediction only # Function: ATP-utilizing enzymes of the PP-loop superfamily # Organism: Nostoc sp. PCC 7120 # 17 224 8 211 275 114 34.0 2e-25 MTPSAPVNFFTIPEIVRLKTVLEEIAPEHEICVAYSGGLDSRFLSFCAKKLGFRVNLLHI IGPQIAPDETADALKDAEELGLEPILVPAASLTLPELARAGVNRCYVCKTHLFTELIDIA RKSGCQGPICDGTNTSDLSVYRPGIKALRELKVESPLVKAGISKPRIREIGRIVGFPHPE QAARPCLLTRFPYGATPQSSQLEAIADAELLVAQDPVGRNLRFRIRMPKTGDTRLHIERA SLEKTPHAEKELERIAAILRKQFGQKLPGLRVEVLEKLSGYYDRLQQPEGIEN >gi|319805292|gb|ADMF01000013.1| GENE 4 3380 - 4660 1268 426 aa, chain - ## HITS:1 COG:MA1313 KEGG:ns NR:ns ## COG: MA1313 COG3875 # Protein_GI_number: 20090175 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 3 422 54 463 468 226 34.0 5e-59 MALQKYEFAYGRGTQSFEYDDADVLKVVRTEPQPILEDVKGHLLDMLEHPIGLPPLSEIV KPGDTVAFICNDPTRVANSFVFMPILVNELNRLGVPDANMRIVFALGTHRAMTHEEMVEQ VGEEVAGRLPMFNSIATNADDFQYFGKTTLGTPVWINKLLCDVDHVFLTGTIVHHYFSGY GGGRKAVLPGCAAMETVRMNHSHMLSDKAGLGLMEGNPCYDDQMEGVALFAKGRSLFLLN AILNAEHQFLRIFTGDYVKAHKEACKFVDEVYGSKIPREADLVIASCGGWPKDINVYQMQ KTMDNTACAVKKGGVVILLAECIEGSGSAKLEETFNRLTTPAAIKHELEENFQIGANKAF AITRPQQKAKFILVTKLNRSLAKSMHFTAAVDTVDEALKLAHELLGEHPATILMPEGSLT VPRVAE >gi|319805292|gb|ADMF01000013.1| GENE 5 5033 - 5866 488 277 aa, chain + ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 13 271 4 261 262 187 38.0 1e-47 MIVNTPQQTFRAALGQFFVKETSTENLAAARSLIERSETAGADLLVLPECIIARKLGMPE WGQKQAEPLDGPFVSGLREATRGRRVTVVCTVQAKIANESRYANDLLVIQNGELRLTYQK IHLYDAFRGKESSYAAPGDVLPQVLQIGPFKVGFLTCYDVRFPEMTRALACAGATLLVVS AAWVKGALKEMQWDICLRARALENTCYLIGVSECGPATVGSSKVVDPMGVVVAQCGIDEQ LLMVDLDPCKVEASRRVLPVLENNRFAPPELQKLPQQ >gi|319805292|gb|ADMF01000013.1| GENE 6 6338 - 6805 626 155 aa, chain - ## HITS:1 COG:PA1008 KEGG:ns NR:ns ## COG: PA1008 COG1225 # Protein_GI_number: 15596205 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Pseudomonas aeruginosa # 11 149 10 148 157 157 53.0 9e-39 MTELTAGMEAPDFTLESDAGTPVSLSALRGNGVVLYFYPKDNTAGCTTEAQGFRDHLADF KALGYEVLGVSRDSVKSHCSFRDKQNLNFPLLSDKEETVCNLYGVLKEKTMYGRKCFGIE RSTFVIDPQGKIIHALRGVKAKTHVDELLELLKQA >gi|319805292|gb|ADMF01000013.1| GENE 7 6949 - 8307 1223 452 aa, chain - ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 20 309 15 275 355 108 30.0 2e-23 MTHATALQNHRLMLGGRSFLPLMLGGMGTNISTAELALAVERLGGIAHLSDAMLMDLSDR LFGTRFTAEKAKRTASERDNMDKSAVTFNLDNVKEAARRYVSDVMSRATGHGLVLINCME KLTMNAGLETLRARLTAALDGGIDGITLSAGLHLSSMKLMADHPRFKDALIGIIVSSSRA LNLFLKKSASTGRLPDYVVVEGPLAGGHLGFGMDWANYSLADIVKDVKAFLAKSSLNIPV IAAGGIFTGGEAAEMMSDTGCDGIQAATRFAVAQESGLPYAVKQAYFNAKPEDIVVNHLS PTGYPMRMLRQSPAITGDIRPNCEAYGYLLNHGDCSYLKEWRLRQEAAANGTPASEMPAK EKCCLCTYMRNYKVWTCGTSAARLHETSVRQANGEWILPTAADVFHDYMQSTGSEILLPE AAREYLAQSRIPEMIASGAQLLSGVNRTVAAF >gi|319805292|gb|ADMF01000013.1| GENE 8 8659 - 10203 1695 514 aa, chain + ## HITS:1 COG:VC1131 KEGG:ns NR:ns ## COG: VC1131 COG1757 # Protein_GI_number: 15641144 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Vibrio cholerae # 4 478 6 497 533 309 40.0 8e-84 MEPYAAGWLSIVPPIVAIALALLTKEVLSSLLIGILTGTLIYAIGTDANIIMGTLETTFK LMGDKVDFNILIFTSLLGALVYVVGMSGGTKAYGNWAVQRVKSRRATLMSTSGLGILIFI DDYFNCLSVGTVMRPLCDRYNVSRAKLAYIIDSTAAPVCIIAPVSSWAAAVGSSLKGNAV FESDMAAFIASIPWNFYALLSIFMVFFIIFTGLDFGPMRTSEEKALQGNVGGIQGGGAEP PKANPRGTVMDMLVPITALIIFAVLALMYSGGYWGADPAYHSFAASIGNSSAAAALVWAA FGSVLVALLLYVPRRLVPFGDFMQGLVEGMKLMLPANIILVLAWTLSGVCRDLLSTPQFV ESLVSTAGGDFSVFLPAAVFIIAAFLAFSTGTAWGTFGILIPIVVPVVQGIDPTLTIVVL SATLAGSVFGDHCSPISDTTILSSAGAGCNHIEHVSTQLPYALLVAFCSAVGYLVAGLSG GNLWLSFGTSLGLLIIAVIVLHNMRRRKPKIQAA >gi|319805292|gb|ADMF01000013.1| GENE 9 10254 - 10652 525 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 2 123 453 574 584 80 32.0 2e-14 MALRTNEVPNPFKALELYRQRNAVECSYRVFKNQIEGDRMLATQTSYRGKLFVFTLATCL RTMMRVKAEAQAKEFDLKIPGNSLSQVFEILRGVTMQRWGSTDSWRINMLTRKQRECFAL FGMTPIKGTRKD Prediction of potential genes in microbial genomes Time: Sun May 29 19:29:07 2011 Seq name: gi|319805272|gb|ADMF01000014.1| Sutterella wadsworthensis 3_1_45B cont1.14, whole genome shotgun sequence Length of sequence - 17256 bp Number of predicted genes - 16, with homology - 12 Number of transcription units - 7, operones - 2 average op.length - 5.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 19 - 348 281 ## - Prom 374 - 433 7.0 2 2 Tu 1 . - CDS 881 - 1000 149 ## - Prom 1234 - 1293 3.6 + Prom 1630 - 1689 5.3 3 3 Tu 1 . + CDS 1809 - 2129 156 ## + Term 2232 - 2287 -0.7 + Prom 2143 - 2202 3.8 4 4 Op 1 2/0.000 + CDS 2320 - 3690 972 ## COG3069 C4-dicarboxylate transporter 5 4 Op 2 . + CDS 3735 - 4994 498 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 5038 - 5074 -0.2 6 5 Tu 1 . - CDS 5017 - 5826 485 ## COG2364 Predicted membrane protein - Prom 5877 - 5936 2.7 7 6 Op 1 3/0.000 - CDS 6218 - 8050 1062 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 8 6 Op 2 3/0.000 - CDS 8268 - 8834 396 ## COG4648 Predicted membrane protein 9 6 Op 3 4/0.000 - CDS 8857 - 9135 334 ## COG0236 Acyl carrier protein 10 6 Op 4 4/0.000 - CDS 9154 - 9420 385 ## COG0236 Acyl carrier protein 11 6 Op 5 . - CDS 9494 - 10288 694 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 12 6 Op 6 . - CDS 10288 - 11133 572 ## Smal_3925 hypothetical protein 13 6 Op 7 . - CDS 11183 - 12865 1822 ## Spro_0143 hypothetical protein 14 6 Op 8 . - CDS 12892 - 13995 1093 ## COG3405 Endoglucanase Y 15 6 Op 9 . - CDS 13995 - 16232 1657 ## Pecwa_0072 cellulose synthase regulator protein - Prom 16367 - 16426 8.5 + Prom 16736 - 16795 2.7 16 7 Tu 1 . + CDS 16923 - 17256 362 ## Predicted protein(s) >gi|319805272|gb|ADMF01000014.1| GENE 1 19 - 348 281 109 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRKAAVEPKWNFYLDTNKSTGIQYVQTSYNIWVPEKKQPRLGGKAYVGRLFPDGSVRPS KSFLERFPQYADKKLYYFENQLVDREGYLKLNPNAEAQWEELQSQEKTD >gi|319805272|gb|ADMF01000014.1| GENE 2 881 - 1000 149 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIILKYMAHIDEHKTAIKPVFYNHVYQETNQAIDINNH >gi|319805272|gb|ADMF01000014.1| GENE 3 1809 - 2129 156 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGTIQTDNNGLRIKLVSDGKGWAIVRPLTLLQHEKLLSKLTIYSVPSPLIERKVYILGRS NISVDLYRDIVDSLANILNSEVIPRLTEIFSPTIVKSIEVYPYTNK >gi|319805272|gb|ADMF01000014.1| GENE 4 2320 - 3690 972 456 aa, chain + ## HITS:1 COG:PM0933 KEGG:ns NR:ns ## COG: PM0933 COG3069 # Protein_GI_number: 15602798 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 3 454 1 460 462 268 39.0 2e-71 MSLLVSLLAAVVVFIAGWAVIKRYPTVIVLFAAGLIMIGLAILFGADSILPKNAKTTGLI WFDAIDIIRLAAIKQVAGIGMIIMVAGGFAKYMETIGASGALVHACISPLKALHSPYIVL GLCYLVGAAMVPVVPSHGGMAMLLLTTMYPILLNLGVSKAGAAAAIFCSGTIGMGPGTGT ALYAAKIADIEPIVYFVHYQLPVAIPMILVIAILNIFVQRYFDRRNDDVYEESIFASDKV LKVGPPTYAILPVLPIALLCIFSKFGYSAIQLNTVTALLLSWVIGVIVELIRVRNVKQVF QDAMAMIKGMGSLFSTIVALIIAAEVFATGIKLCGLITLLLDGANAGGLGITGMSAVLSG LIAVVSFLTGSGVGALTSLGSIATDVANGLGGNVTQLISSMQFTAGLARGISPVAGATIV VAAAAGVSPIAIVRRTAIPMAGAWIVMMIGNYLLLN >gi|319805272|gb|ADMF01000014.1| GENE 5 3735 - 4994 498 419 aa, chain + ## HITS:1 COG:PAB0873 KEGG:ns NR:ns ## COG: PAB0873 COG1473 # Protein_GI_number: 14521524 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus abyssi # 15 403 8 381 383 315 43.0 7e-86 MNSNNHITVDQIKNDAEVIKKELVEWRHYLHAHPELSFKEERTTHYIVNKLKNFGYTDIQ IGFGPLKTGVMVEIGSGRPCVMLRADIDALPIQEQTGVEFCSQSKGVSHACGHDAHITNL LGVAKLLKKYENSIKGRVKLLFQPAEETRVKIYEKPLSGAGYVVRSGAIDDVDAIFGMHV WGMFSKGKIYVKSGPTMMASGRFNLKVIGKGTHGASPHLGCDPITTICQIVDGIQTVVSR EVSPLEPRLITVGTIHGGTATNVVPQEAMISGTLRAASENVVKFMGKRLAEVAEGTAKAH RCSTEYDLLINGPAVVNDSEMVAIVREAAADVLGTERVCDVEMLTASEDFREYSARRPAA LYFMGMFEPEKGVGQPQHDPGFIVNDDVLVDSVAVMTSIVFTYFNKTSENHFGQSTQTI >gi|319805272|gb|ADMF01000014.1| GENE 6 5017 - 5826 485 269 aa, chain - ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 22 216 9 203 227 137 38.0 2e-32 MPPVPRQTPVGSSRRFAHLSLRLLLLLIGMFTAALGVALTTVADLGTTPISTVPYVFTVL TGYSFGTTTFFVNIFLVAGQVLLLRRRFSLWNLLQIPTVLIFGICIDLAMAIVSPHAPAG WWTGLLMSISGNFVLALGIVMQIRSKTIVQPGEGFVLAAAAVTRKSFGSIKIVNDVTLSL IAAGIGLVCAGELIGVREGTVLSAVLVGLFAKLIVKFVDRLGVFVQAGAAAIQEPQPPQP HESAITAIRTSEETNDQLTDERSSVQNRQ >gi|319805272|gb|ADMF01000014.1| GENE 7 6218 - 8050 1062 610 aa, chain - ## HITS:1 COG:RSp0367_1 KEGG:ns NR:ns ## COG: RSp0367_1 COG0365 # Protein_GI_number: 17548588 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Ralstonia solanacearum # 36 458 63 436 438 166 35.0 2e-40 MTGFLAGAAVWRSTAQHLRLPNAVLYAEDAAELLPALFGCWAAGVHVILPGDALPGTLER LSAAGLTAKNTMLGLDAAAMDESCSWSIMTPECRFSDFNRLPPCADLPLLDDKAELLSLL TSGSTGEPKLIRKRLEQCFYEPEAIHAGVIERTGQSPAAWGEFEVLGTVSAQHIYGLLFR LMWPLMEERGIAVGPRLHYPESLEAALENCAVRGRKAVVISSPAHLKRFGDESLFTPSLG TAAAVFSSTGPLDDAGAINAKCAFGHFPFEVLGSTETGGIAWRQRRFTDNEKSAVAASAW KTVEGIQAAVKVNSRYLPAGEGLIALSGRHLDHEGWIDGADRIALQDGLFSLLGRADRIV KIEGKRVALPEVEKLLLETGLVSNSKVFLETIGAESQRDALHAAVVLTPAGRELLFTKGK AALVEPLKTHLKRSLPAVALPRRWRFVDQLPADPQGKVTVACLRTLFDQRRPEWLIETDT AENGKRVLTLRFEASLQLAWFRGHFPDMPILPGVAQLLLVETAAREFTQVPPDAAPAQVK TLKFRAVIRPGAKLRLRLTLPASIPTMSDQDGSWKLGFEWRLINELPGAEDELQTSGTIE WHRAQDEPAA >gi|319805272|gb|ADMF01000014.1| GENE 8 8268 - 8834 396 188 aa, chain - ## HITS:1 COG:ECs4330 KEGG:ns NR:ns ## COG: ECs4330 COG4648 # Protein_GI_number: 15833584 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 20 183 21 190 193 103 39.0 2e-22 MALPLKAVLRAAFGTVLVLYPFWAWYGLSHWGPAAVAAGLAAVTFCRALVTRSREDWILS VIAACLCAAAAFSGLEEPMRLYPVLVNAFLLWAFGTTLLPNRMPMVERFARMKDSVLPPE AVRWCRGVTQVWCGFFILNGAAALVTVFLSRETWVLWNGCLSYIAIGVLFAGEWLLRTIV MHRRERQK >gi|319805272|gb|ADMF01000014.1| GENE 9 8857 - 9135 334 92 aa, chain - ## HITS:1 COG:ECs4329 KEGG:ns NR:ns ## COG: ECs4329 COG0236 # Protein_GI_number: 15833583 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 7 87 3 82 83 70 48.0 7e-13 MTTFTPQEEKVYAALSKILTNEFDIPAEKIRPEARLYEDFDIDSIDAVDMIVQLKPYLGN RTVKPEAFKAVRTLGDVVSVIAKIMEEPDPAA >gi|319805272|gb|ADMF01000014.1| GENE 10 9154 - 9420 385 88 aa, chain - ## HITS:1 COG:XF0771 KEGG:ns NR:ns ## COG: XF0771 COG0236 # Protein_GI_number: 15837373 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Xylella fastidiosa 9a5c # 1 85 20 104 106 86 49.0 9e-18 MDNPLISELQHLIVESLALEDVQPEDIDPDEPLFGEGLGLDSIDALELGLALKKRFGVTL TAESEESRAVFKNVRSLADYIESHREQA >gi|319805272|gb|ADMF01000014.1| GENE 11 9494 - 10288 694 264 aa, chain - ## HITS:1 COG:NMB1698 KEGG:ns NR:ns ## COG: NMB1698 COG0204 # Protein_GI_number: 15677546 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Neisseria meningitidis MC58 # 18 218 9 207 252 123 36.0 4e-28 MNAVSMHAFRRRALLPFRLAFTAFAFALFGLGGIVFGFFLTPWLKMAGGTPEEKKSLARR VVKRWFGLFVSVVTSLGLVRIEVKNPEAFQKKGAILAANHPSLIDIVCLLSIVPEATTIV KASLLKNWFTRAPILGAGYIPNDAGPEALVLLEAELSRGVSFVIFPEGTRTPIQLSEMPK MHRGTAQLALHANRPITPVRISAHPRWLTKDAVWWRLPQEPMVLTFEALPEIDVQTFQKT YNQSFRRAAVELTNAVGRALFPHL >gi|319805272|gb|ADMF01000014.1| GENE 12 10288 - 11133 572 281 aa, chain - ## HITS:1 COG:no KEGG:Smal_3925 NR:ns ## KEGG: Smal_3925 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 7 162 6 150 247 93 43.0 1e-17 MINCAQILAWSAWAPGLADRAAWLAALRTHGADFGLLSSEYAPLNAAEPKAPAALVPPML RRRLSPLGRAAAEAAAPLLAAAEDKNLPWVYASRWGDLQLAVDSLESVAAGGTVSPAAFS TSVHNAPPALLSIALGHTGNLTALAGGPFSLEAAFESAVGLLFEAPQVLLICADLKPPVQ TNAVGVTHAVGLLLGRQHETADPDQWRQACAKGPYAALTTRPLSAPETPDNRLDTMGGSS PALEVLAWLLGSDERTFTHFDRHAAHIWAKTSRLEAETRHP >gi|319805272|gb|ADMF01000014.1| GENE 13 11183 - 12865 1822 560 aa, chain - ## HITS:1 COG:no KEGG:Spro_0143 NR:ns ## KEGG: Spro_0143 # Name: not_defined # Def: hypothetical protein # Organism: S.proteamaculans # Pathway: not_defined # 19 560 1 550 550 410 40.0 1e-113 MTDKNTTPDTQPSPPTQKMPPQKTPRAAAELKLPWRGLGIWNVYFILKFALAYFSYLNLD VLWNALLLVFLLIPIPYRWLSALRGLAAIAAGAALAYSESWLPPIASLTTNAAAVKGFSL NYVIDFALDFINWQMVGWAALIFCLWYLLRNCVRITFITICYFAVMVTMPYLDAFFAPAA REAAAGGTETAEGGPAGAAADSKTIEEWYQAFLNYEKERRAELPQGLPDKDTPFDILLLN ICSLSNDDLVASQLDKHPVLEKFNIRFDRFNSATSYSGPAAIRLLTGACGQPSHQGIYGE RRPECEILNRLGTIGYRQHMMFDHSGEYDSFLPTLRNETGLTADLESLGKNLAVRYMGFD DEELTDTLALLRYWQRTLQRAKDKRTVTFMNLIALHDGNRLPRHGRAEPFKPRAQKLLDD LQTFLRELERSGRKVMVVVVPEHGAAVRGDKIQAPRLRDIPSLRITEVPTMVKFVGLQGL PDAPIHVTGPTSYLAMTTLIGRTLETNFFSKKGGAAPLESLVKDLPETNPVSENGQAKVL EYKGQEYLKQKDGDWKPYAK >gi|319805272|gb|ADMF01000014.1| GENE 14 12892 - 13995 1093 367 aa, chain - ## HITS:1 COG:ECs4411 KEGG:ns NR:ns ## COG: ECs4411 COG3405 # Protein_GI_number: 15833665 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Escherichia coli O157:H7 # 1 359 1 357 368 278 42.0 1e-74 MSKLKHFIVTGLCAAIGATAAVSAHAWDLWDAFKTASVDNARVVDRSDERKITTSEGQSY ALFFALAADDRTTFDALLSWTEQNLSGGDITKTLPAWLWGEDKASRSWKILDTNNAADSD MWIAYNLLEAGRLWKNDGYTAKGRAMLELLKKEVRTVDGLGDVILPGRVGFEKNGLVKLN PSYYPLFILKRFALEDAYWKKVYDGSLRMLVRSAPSGYAPEWAQFDKSGRLVPPKGSDYE VGSYNAIRTYLWVGMMSPLDPASPVLKKQFRPFLEIVRRMNTPPEEVSVTTGDVSGPGPA YFGACVLELLGNDHTAGLIRTTLAADPVSPDRYYGNVLNLYGLGFDDKRFAFDADGRLVL PRQSGAK >gi|319805272|gb|ADMF01000014.1| GENE 15 13995 - 16232 1657 745 aa, chain - ## HITS:1 COG:no KEGG:Pecwa_0072 NR:ns ## KEGG: Pecwa_0072 # Name: not_defined # Def: cellulose synthase regulator protein # Organism: P.wasabiae # Pathway: not_defined # 50 744 71 777 785 415 33.0 1e-114 MFAHPSFRQGAETFKAAALSAFVLLALHTPAPSAAPMQPAADFAPVWRTDATGTRTEIKP LLNLVPGGQAKSVKLTGLVKNQFFDFGVRSDDVISRADLELSFTASPSVLDTTSQLNIYL NGQLQQTAVLTKDMIGKPSKLVFSLNPKSMQTMNQVSIEFVGHIQSTCENPADDALWLNI NAQSRLVLEKQRIRLGSDMGKLPAPFIDTATGDPTVLPMVFPSAPSAAMKTAAALTASWA GRLAYWRGADFPVYFNEAPAGEHFVVFVTNTARPTFLKDFPKVEGPQISVGDAPNSLAEK MLIVAGRDDADLIAAMKALGRGSSVMIGDTFKPAAQQEPERRKAYDAPRWLDTDQKVPFS RLIEYSGQLTAKGYEMPPVHLPVRLAPDLFMVDNATLEMKVDYRASKPMKDEAGQFRALV NGRLIDSDPLPTKDGHGSRVISLPGFYGALFNNTNDALALAQTNDFTFEMHYERTYEGGS PENCKSIMVFPHQFEVEPTSTLEISGLYHYARMPNLKLFTQTGYPFTRYADLAETAVLIA DNAEPQSIRAMLNAVGRMSAATGAFGNRIAVTGNPADPILKDRDVLLVGAMPALLADINE DDALKVQEETAKAFKAGQFPKPPQQSIFAPGVGVISGFKSPLSSEHSVVALLAEGEAGAV VLADALGDAQGLAAAGGSTTVVSMDGLAAFSVGDRYAVGNLPVQHQIWMRLSQHPGWLVF FALISAALIGFAAFFLMRRWVGRRA >gi|319805272|gb|ADMF01000014.1| GENE 16 16923 - 17256 362 111 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKNTRNALDTSLSYAVIGLDLAKADCAVAAVPCADDELGLIDRMDYESLFEQAEKLGP TLFAMEPCCGYSQISLRLQNMGHEVKVISGHAVKNWIATHKSNQKTDLNDA Prediction of potential genes in microbial genomes Time: Sun May 29 19:30:26 2011 Seq name: gi|319805164|gb|ADMF01000015.1| Sutterella wadsworthensis 3_1_45B cont1.15, whole genome shotgun sequence Length of sequence - 133959 bp Number of predicted genes - 108, with homology - 90 Number of transcription units - 72, operones - 23 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 469 - 528 3.1 1 1 Tu 1 . + CDS 560 - 2029 418 ## COG0675 Transposase and inactivated derivatives + Term 2069 - 2118 0.3 2 2 Tu 1 . + CDS 2194 - 2424 195 ## 3 3 Tu 1 . + CDS 2546 - 3292 381 ## 4 4 Tu 1 . + CDS 3443 - 4069 379 ## COG0716 Flavodoxins + Term 4083 - 4117 -0.2 5 5 Tu 1 . - CDS 4078 - 6681 2351 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - Prom 6752 - 6811 3.5 + Prom 6632 - 6691 2.0 6 6 Tu 1 . + CDS 6910 - 7716 774 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Term 7720 - 7757 8.0 7 7 Tu 1 . - CDS 7786 - 8979 1164 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Term 9227 - 9275 -0.2 8 8 Tu 1 . - CDS 9330 - 9746 614 ## COG0607 Rhodanese-related sulfurtransferase - Prom 9810 - 9869 3.0 + Prom 9742 - 9801 2.5 9 9 Tu 1 . + CDS 9961 - 10776 643 ## COG0300 Short-chain dehydrogenases of various substrate specificities + Prom 10864 - 10923 1.8 10 10 Tu 1 9/0.053 + CDS 10983 - 11993 1322 ## COG2984 ABC-type uncharacterized transport system, periplasmic component + Term 12018 - 12077 6.6 + Prom 12110 - 12169 2.9 11 11 Op 1 13/0.000 + CDS 12206 - 13123 1078 ## COG4120 ABC-type uncharacterized transport system, permease component 12 11 Op 2 . + CDS 13185 - 13976 239 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 14008 - 14049 7.3 13 12 Tu 1 . + CDS 14173 - 15450 1207 ## COG0477 Permeases of the major facilitator superfamily + Prom 15453 - 15512 2.3 14 13 Tu 1 . + CDS 15655 - 16143 332 ## COG2452 Predicted site-specific integrase-resolvase + Term 16341 - 16380 -0.3 + Prom 16257 - 16316 2.3 15 14 Op 1 . + CDS 16384 - 18483 1104 ## 16 14 Op 2 . + CDS 18493 - 19044 402 ## COG0350 Methylated DNA-protein cysteine methyltransferase 17 15 Op 1 8/0.053 - CDS 19060 - 19713 641 ## COG4566 Response regulator 18 15 Op 2 . - CDS 19710 - 21593 1506 ## COG0642 Signal transduction histidine kinase 19 16 Op 1 . + CDS 22098 - 23963 2651 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 20 16 Op 2 . + CDS 24000 - 24392 380 ## + Term 24421 - 24467 14.5 21 17 Tu 1 . - CDS 24481 - 25614 909 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 25653 - 25712 1.9 - Term 25680 - 25728 9.4 22 18 Op 1 . - CDS 25751 - 28357 2563 ## COG2217 Cation transport ATPase 23 18 Op 2 . - CDS 28550 - 29923 842 ## COG0564 Pseudouridylate synthases, 23S RNA-specific - Prom 29998 - 30057 3.9 + Prom 30097 - 30156 4.0 24 19 Tu 1 . + CDS 30297 - 31601 1078 ## COG0534 Na+-driven multidrug efflux pump + Term 31648 - 31682 -0.8 + Prom 31991 - 32050 1.9 25 20 Tu 1 . + CDS 32101 - 32376 491 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 32416 - 32450 -0.8 26 21 Tu 1 . + CDS 32760 - 34097 1710 ## COG1301 Na+/H+-dicarboxylate symporters + Term 34152 - 34196 5.2 + Prom 34172 - 34231 3.0 27 22 Tu 1 . + CDS 34278 - 35048 600 ## Veis_2606 hypothetical protein - Term 35055 - 35098 9.2 28 23 Op 1 . - CDS 35152 - 36522 1420 ## COG3069 C4-dicarboxylate transporter - Term 36536 - 36580 1.1 29 23 Op 2 . - CDS 36663 - 37094 396 ## - Prom 37228 - 37287 2.5 - Term 37248 - 37288 3.5 30 24 Op 1 22/0.000 - CDS 37310 - 39691 2904 ## COG0370 Fe2+ transport system protein B 31 24 Op 2 . - CDS 39743 - 39970 344 ## COG1918 Fe2+ transport system protein A 32 24 Op 3 . - CDS 39983 - 40219 247 ## Dd703_2073 FeoA family protein - Prom 40249 - 40308 4.6 - Term 40274 - 40311 2.4 33 25 Op 1 . - CDS 40486 - 41028 512 ## 34 25 Op 2 . - CDS 41081 - 41695 569 ## 35 25 Op 3 . - CDS 41720 - 44203 2890 ## COG2217 Cation transport ATPase - Term 44281 - 44317 7.0 36 26 Tu 1 . - CDS 44398 - 44679 566 ## DvMF_1418 hypothetical protein - Prom 44874 - 44933 3.0 37 27 Op 1 27/0.000 + CDS 45290 - 46486 600 ## COG0845 Membrane-fusion protein 38 27 Op 2 . + CDS 46483 - 49803 2947 ## COG0841 Cation/multidrug efflux pump + Prom 49806 - 49865 5.8 39 28 Op 1 . + CDS 49923 - 50597 572 ## COG1280 Putative threonine efflux protein + Term 50833 - 50875 4.0 40 28 Op 2 . + CDS 50891 - 52435 1287 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 52485 - 52527 11.0 + Prom 52507 - 52566 1.6 41 29 Tu 1 . + CDS 52637 - 54454 1691 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 54511 - 54545 7.0 - Term 54495 - 54537 8.3 42 30 Tu 1 . - CDS 54557 - 55732 1025 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 55825 - 55884 2.2 - Term 55843 - 55886 6.4 43 31 Op 1 1/0.105 - CDS 55913 - 56494 717 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 44 31 Op 2 . - CDS 56574 - 57503 917 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 57567 - 57626 3.0 45 32 Tu 1 . + CDS 58025 - 58603 542 ## COG2119 Predicted membrane protein + Term 58621 - 58664 1.7 46 33 Tu 1 . - CDS 58703 - 58972 124 ## - Prom 59052 - 59111 1.8 47 34 Tu 1 . + CDS 59070 - 59609 578 ## + Term 59640 - 59693 9.4 - Term 59624 - 59682 12.2 48 35 Op 1 . - CDS 59684 - 60415 642 ## COG3527 Alpha-acetolactate decarboxylase - Prom 60493 - 60552 5.7 - Term 60504 - 60547 5.0 49 35 Op 2 . - CDS 60578 - 61894 1635 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 62105 - 62164 2.2 - Term 62134 - 62184 12.2 50 36 Op 1 24/0.000 - CDS 62252 - 62893 646 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 51 36 Op 2 23/0.000 - CDS 62887 - 63663 548 ## COG0107 Imidazoleglycerol-phosphate synthase 52 36 Op 3 25/0.000 - CDS 63645 - 64382 806 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 53 36 Op 4 18/0.000 - CDS 64379 - 64987 531 ## COG0118 Glutamine amidotransferase 54 36 Op 5 13/0.000 - CDS 64984 - 66078 1132 ## COG0131 Imidazoleglycerol-phosphate dehydratase 55 36 Op 6 19/0.000 - CDS 66075 - 67217 1094 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 56 36 Op 7 18/0.000 - CDS 67219 - 68538 1469 ## COG0141 Histidinol dehydrogenase 57 36 Op 8 . - CDS 68544 - 69443 950 ## COG0040 ATP phosphoribosyltransferase + Prom 69384 - 69443 1.6 58 37 Tu 1 . + CDS 69674 - 69934 95 ## 59 38 Tu 1 . + CDS 70103 - 71929 2523 ## EFER_3637 putative arylsulfatase; possibly exported + Term 71998 - 72044 6.1 + Prom 72008 - 72067 2.0 60 39 Tu 1 . + CDS 72176 - 73165 973 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 73263 - 73307 1.2 61 40 Op 1 . - CDS 73186 - 74811 1070 ## COG1283 Na+/phosphate symporter - Prom 74844 - 74903 4.1 62 40 Op 2 . - CDS 74910 - 76043 895 ## COG3191 L-aminopeptidase/D-esterase - Prom 76168 - 76227 1.8 63 41 Tu 1 . + CDS 76241 - 76753 400 ## 64 42 Tu 1 . + CDS 77090 - 78298 924 ## + Prom 78319 - 78378 3.5 65 43 Tu 1 . + CDS 78521 - 79705 1073 ## BB4490 outer membrane porin + Term 79897 - 79938 2.2 - Term 79535 - 79573 0.2 66 44 Tu 1 . - CDS 79780 - 80502 506 ## - Term 80575 - 80620 7.1 67 45 Tu 1 . - CDS 80687 - 82267 2004 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 82444 - 82503 2.3 68 46 Op 1 8/0.053 + CDS 82729 - 83769 869 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 69 46 Op 2 . + CDS 83788 - 84594 790 ## COG0548 Acetylglutamate kinase + Term 84612 - 84656 -1.0 + Prom 84788 - 84847 4.5 70 47 Tu 1 . + CDS 85097 - 85855 712 ## COG1246 N-acetylglutamate synthase and related acetyltransferases - Term 85693 - 85729 -0.5 71 48 Tu 1 . - CDS 85787 - 85921 78 ## 72 49 Tu 1 . + CDS 85943 - 87676 1408 ## COG4992 Ornithine/acetylornithine aminotransferase + Term 87680 - 87732 8.4 + Prom 87854 - 87913 3.8 73 50 Tu 1 . + CDS 87981 - 88901 763 ## COG0583 Transcriptional regulator + Term 88963 - 89007 3.2 - Term 88950 - 88994 10.0 74 51 Tu 1 . - CDS 89024 - 90499 2032 ## COG1012 NAD-dependent aldehyde dehydrogenases - Term 90851 - 90899 9.4 75 52 Op 1 . - CDS 90939 - 92018 1196 ## COG0500 SAM-dependent methyltransferases 76 52 Op 2 . - CDS 92072 - 93109 872 ## 77 52 Op 3 11/0.000 - CDS 93171 - 94445 1229 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 78 52 Op 4 . - CDS 94442 - 95188 206 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 79 52 Op 5 . - CDS 95231 - 95734 306 ## ACIAD0581 putative 3-hydroxylacyl-(acyl carrier protein) dehydratase 80 52 Op 6 . - CDS 95731 - 97062 594 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 97083 - 97142 2.2 81 53 Tu 1 . + CDS 97186 - 97860 448 ## COG0350 Methylated DNA-protein cysteine methyltransferase 82 54 Tu 1 . - CDS 97881 - 98690 591 ## COG1694 Predicted pyrophosphatase - Prom 98796 - 98855 2.9 83 55 Tu 1 . + CDS 98825 - 99574 675 ## COG2356 Endonuclease I + Term 99610 - 99657 12.0 + Prom 99712 - 99771 5.0 84 56 Op 1 . + CDS 99849 - 100268 566 ## RB4711 hypothetical protein + Prom 100270 - 100329 1.6 85 56 Op 2 . + CDS 100529 - 101953 1038 ## + Term 101999 - 102048 6.2 + Prom 102247 - 102306 4.8 86 57 Tu 1 . + CDS 102382 - 103710 1302 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 103732 - 103776 5.0 - Term 103718 - 103764 11.3 87 58 Tu 1 . - CDS 103817 - 104629 1184 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Prom 104902 - 104961 2.5 88 59 Tu 1 . + CDS 105073 - 105879 1339 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 105936 - 106004 18.1 89 60 Op 1 1/0.105 + CDS 106113 - 108755 3069 ## COG1138 Cytochrome c biogenesis factor 90 60 Op 2 . + CDS 108752 - 109771 1140 ## COG4235 Cytochrome c biogenesis factor + Term 109808 - 109850 5.2 91 61 Op 1 24/0.000 + CDS 110387 - 111571 1351 ## COG0505 Carbamoylphosphate synthase small subunit 92 61 Op 2 . + CDS 111623 - 114868 3851 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Prom 115047 - 115106 1.8 93 62 Tu 1 . + CDS 115135 - 118218 1921 ## COG1061 DNA or RNA helicases of superfamily II + Term 118301 - 118353 5.6 - Term 118291 - 118338 5.2 94 63 Tu 1 . - CDS 118343 - 119839 1827 ## COG0165 Argininosuccinate lyase - Prom 119928 - 119987 5.1 - Term 120084 - 120121 -0.3 95 64 Tu 1 . - CDS 120271 - 121035 789 ## Bcep18194_B0247 hypothetical protein - Prom 121070 - 121129 3.3 + Prom 121012 - 121071 3.1 96 65 Op 1 . + CDS 121232 - 122044 441 ## FN1780 hypothetical protein 97 65 Op 2 . + CDS 122079 - 124652 1292 ## COG0457 FOG: TPR repeat + Term 124663 - 124694 -1.0 98 65 Op 3 . + CDS 124774 - 125034 314 ## Ccur_12930 copper chaperone + Term 125103 - 125145 9.2 + Prom 125115 - 125174 6.5 99 66 Op 1 3/0.053 + CDS 125278 - 125949 1031 ## COG3314 Uncharacterized protein conserved in bacteria 100 66 Op 2 . + CDS 125942 - 126418 477 ## COG0700 Uncharacterized membrane protein + Term 126432 - 126476 -1.0 + Prom 126619 - 126678 3.4 101 67 Tu 1 . + CDS 126728 - 127516 593 ## 102 68 Tu 1 . + CDS 127776 - 128246 431 ## COG2954 Uncharacterized protein conserved in bacteria 103 69 Tu 1 . - CDS 128255 - 129187 725 ## COG0583 Transcriptional regulator 104 70 Tu 1 . + CDS 129174 - 129389 78 ## 105 71 Op 1 11/0.000 - CDS 129380 - 129997 240 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 106 71 Op 2 . - CDS 129994 - 130893 736 ## COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain - Prom 131015 - 131074 8.1 - Term 131153 - 131203 11.4 107 72 Op 1 . - CDS 131226 - 133457 2423 ## Coch_1325 conserved hypothetical protein, membrane 108 72 Op 2 . - CDS 133494 - 133958 333 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319805164|gb|ADMF01000015.1| GENE 1 560 - 2029 418 489 aa, chain + ## HITS:1 COG:all4675 KEGG:ns NR:ns ## COG: all4675 COG0675 # Protein_GI_number: 17232167 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 203 437 215 445 467 109 31.0 1e-23 MQTGRSFAAHFEDDASREAYLAWSAAQMLVYNAKVDESNYFWKFRCKFWSPEPLPKPDQK YAHLVNPDTVPWVKEVPSAVRGIGAYRFYQAMTRFMRGLSKRPHRKPIRNADRQLTLTRD YFSVKQVSQKWWELTFGSKKKTAGRFRFRAHRRFEMPAMVMITCTNQCLQLGFSYEDELT EFPETEEEILARLRKLTPEELAERTIGGDVGVKVRLQLSNGESLNLSEIEKTRIARKDFG LRRHQRRLARMKPGSRNYKKQTRKIAKTYAYEKNVNNNFCHQTSHKIAVMEGIEVVVLED LNVAGMVRRPKPKYDNKGRAQPNGAAAKSGLNKAVTKSHFARLRTSILYKCRRNGKVAVF VNAKNSSRECSSCGYTAKKNRPSQAVFCCGREGCGHEENADLNASRVIRKRGVKMILEGL VNKKESKKLLRVPRAKKRNIGVDRPESMPAEPSVCSCVLHGVGIVAALNQEADAARVCES RSSGLQAGE >gi|319805164|gb|ADMF01000015.1| GENE 2 2194 - 2424 195 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTIAYFAGCAASLLFFGRLSTRFGRRPMAALAALLVLAVLMLLSNLESLAALYIARLLQ GICVRTDGFRSDRVDY >gi|319805164|gb|ADMF01000015.1| GENE 3 2546 - 3292 381 248 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLQWLILLLGTAAALMLPAIYLSAETAHCRPIPLKDLLMPALKLPKRIRPIFLPFMAAV IGGWTLGAFAQAFSAPLAETLLGHDDRLAAAVVFVGFIALFAWGGFLLRGSALRALQYSL VLMLAAMTLAIGAFVCQNFLGFVLSWAGCGLFSGIGAAAAMKISMADIHADERAEMLALI YAVGYAASAIFGFMASVLANYVPLWQLLCAVFIWILSLILISLTSKHLRQYAAMVEFGAL HRKAGAAD >gi|319805164|gb|ADMF01000015.1| GENE 4 3443 - 4069 379 208 aa, chain + ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 31 205 1 175 179 144 36.0 8e-35 MPRSRIPSSASNADTIMRLQTAAASDRAAGLNQTHSARVLVVCYSRKGENYAPGGTEVLE IGHTAKMAQLISALTGGDLYEIQTEKNYPANYRETTRIAEDELRRDEKPMLAGTLPDLSK YDLIFLGHPIWWGKLPPAVNSFLSAANLSGKEVAHFCTHAGSGFGTSDRELRTRAPNAQF LESLSVVGTEVDRAKVQIENWVRRVLNR >gi|319805164|gb|ADMF01000015.1| GENE 5 4078 - 6681 2351 867 aa, chain - ## HITS:1 COG:yhjO KEGG:ns NR:ns ## COG: yhjO COG1215 # Protein_GI_number: 16131405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Escherichia coli K12 # 13 865 33 877 888 770 44.0 0 MTSFLRAVLPQTLCARFESWRKNGASTPSVLVNGLLLTLLLVIFPLEREPFRTLRSRLRD YYPQINPECPRLLDSLRVIIQSFWLLFVKPGRPSGAEAVEKVLAGLRAAGRIINRVGELW GNFCLSIIRRVKPLSEASNAGDSEKVSDRAQFSLGEKTLIAIAVILGLILAAICITQPFN LQGQVVFLTFMFFSMIALARIRARISLMLLFVISIVVSGRYLWWRCTSTVNSDTALDLFF SCALLLAELYAFAVMVLGYFQVCWVLDRKPYPLPANRKVWPTVDIFIPTYNESLDVIKPT VYAALNLDWPADKLRVYLLDDGSRDAFKAFADEVGAGYIKREEHNHAKAGNINHAMTVTD GEFIVIFDCDHVPSCDFLLSTMGWLVKDPKIALVQTPHHFYSPDPFEKNMHLDRRLPIEN SLFHDFIQKGNDTWNATMFCGSSAVMRRAALNEVGGIAVETVTEDAHTSLKLNRRGWSSA FIDRAVASGLSTETLSAHIGQRIRWARGMIQIFRLDNPLFGRGLTLPQRLCFFNAMLHFL HGLPRLIFLVAPLPYMFADIYIIYATAASIFAYVIPHMVHSAVTNQMLQRGYRYPFLSGV YETILSWYILIPTTVALIAPHVGKFNVTAKGGTIDKKYLDWDISKPYLVLIALNLIGLAI GVGKAFFSPNPEFLTLIINLGWIVYNLMILGASMAVAVEEVQTHAFPRVPLSVPVEVEAD GVVRQAELVEYSQVEVRIKNLDEALTRLSEGQAVRLHLSDGEHRFTFTAAAGVFETKGIR DFTMRFADKTEERNFNRCTFARRGMWATTPDPTIDDRFLTGFVQLWNIAVYGYRSMIEFL PGKTLPALRDGIISFLPKTPSAYKTEA >gi|319805164|gb|ADMF01000015.1| GENE 6 6910 - 7716 774 268 aa, chain + ## HITS:1 COG:RSc0774 KEGG:ns NR:ns ## COG: RSc0774 COG1179 # Protein_GI_number: 17545493 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Ralstonia solanacearum # 2 264 11 297 300 219 47.0 4e-57 MQPSAHVIDYERRFGGVARLYGRDGAEAIAKTHFCVVGVGGVGSWAVEALARTDARLITL IDLDQVAESNTNRQIQALGDEYGKAKIAALKERIALINPRAEVRLVEEFVDEDNVEALIP ADAVVLDCIDQVRAKAALIAHCRKFKQFIVTSGAAGGRVDPSQIRTGDLGRITGDPLLSS VRYRLRKAYGFPKASPDAGRPGKPMAPLFRVASVYSAEPVKKPLEAETCAVTQSSGLACS GYGSGVVVTASMGMMCASIALNEVCRRG >gi|319805164|gb|ADMF01000015.1| GENE 7 7786 - 8979 1164 397 aa, chain - ## HITS:1 COG:SMc02256 KEGG:ns NR:ns ## COG: SMc02256 COG1473 # Protein_GI_number: 15964313 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Sinorhizobium meliloti # 16 376 10 368 389 293 45.0 3e-79 MAQAIDALAELVGAEAARRIVEFRRDMHQHPEIGMDTARAADKIEAFLQTLPVEQVHRFA GNGVCAVIRGKKDGPMIGLRADTDALPIQEETSVAWKSAIDKCAHLCGHDGHTAGLLAAA ALLAQTRDFAGSVVLIFQPGEEGWAGADKMIKDGLFDRYPCREVFAIHGAPSRPLGTIAV REGAMTASVDIAYMTVEGRGGHGARPQETIDPMPAAAELILALQTIVARNINPADSAVVS CCFVQAGDPLAPTVIPQRVNLSATIRTHSPKVRDKIEARFNEITRGIGTVFGGEVKLDYQ RRYPPQINDPALVRAILPALQSVYGEAGVDTKFAPSMGGEDFAFMSEKVPGVYMQVGLGD EGHTAQLHNPGFDFNDLGLAYAARTFAAIVQERLPLN >gi|319805164|gb|ADMF01000015.1| GENE 8 9330 - 9746 614 138 aa, chain - ## HITS:1 COG:HI0679 KEGG:ns NR:ns ## COG: HI0679 COG0607 # Protein_GI_number: 16272621 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Haemophilus influenzae # 39 128 3 89 105 68 32.0 3e-12 MTQAISAAALSAALSSGAAALEPVSPQPSQPLTYANPAYAKVTPETAKKMMAEGVVVIDV REPQEFAEGHVQGAVNVPLSTFHPGMRLEAAPDFNQKVLVQCRSGVRVERAAKILIESGY KHIYNMYGTMQWPYELVR >gi|319805164|gb|ADMF01000015.1| GENE 9 9961 - 10776 643 271 aa, chain + ## HITS:1 COG:CAC2992 KEGG:ns NR:ns ## COG: CAC2992 COG0300 # Protein_GI_number: 15896244 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Clostridium acetobutylicum # 12 262 4 242 262 159 39.0 5e-39 MAQKERVAPVAVITGASSGLGAVFARIAAREGYRPVLVARRQQRLEALAAEIETASGLKP WVLALDLTEFAELSRLMDFLETRSVTPEIFINNAGFGDFGPMVDADEERISKMLRLNIAA LTGLSIEAARAMKRLGRGRILNVASTAAFQACPGFGVYAATKAYVVSFTESLSEELRGTG VSATAFCPGPTATEFGEAAGLDESAFGRISLDKWERSAAACAEAGWAAMEAGRTVKIDGC WNTVLAVSAQILPRLWVRRIAGVIFRNVPRK >gi|319805164|gb|ADMF01000015.1| GENE 10 10983 - 11993 1322 336 aa, chain + ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 11 332 20 339 344 217 39.0 2e-56 MQISSLSRRGVLALSAAVALALAGCGDKSAPAAGAAAKAELTPVGIVQLVEHAALDACTK GVVDALAERGFKDGVNIKLDIQNAQGDQSNLHNIANRFVSNKDKVIFAVATPAAQAVATV AKNTPIVATAITDFVAAKLVKSDEAPGGNVTGVSDLGPIEAQLDLLLKFIPNAKVVGTIY NSSEINSAYQVEIFKQAAAKRGVEVLEATVSNVNDIQQAVASISSKVAGLWLPTDNVLAS AIPALVKVTNPVKLPVVAGERGMTEAGCLGSISVDYYEIGRMTGQMGADILEGKKKPAEM PVQHVATGTPVFNVKAAEAIGVTIPEELKKGAVLFQ >gi|319805164|gb|ADMF01000015.1| GENE 11 12206 - 13123 1078 305 aa, chain + ## HITS:1 COG:SPy1018 KEGG:ns NR:ns ## COG: SPy1018 COG4120 # Protein_GI_number: 15675019 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 15 297 1 280 289 204 46.0 1e-52 MVLERTYKGIFMLDLLISTVGQGLQWSVLALGVFLTFRILDIADLSVEGSFPLGAAAAAT AITSGLGLPAAFVLALIAGALAGAVTGILTTKLRIPALLAGILTMIGLYSVNLHVMGKSN IGLLQDETVFTILENSLGLSVAVSGLAVGLIFAALIAVILYWFFGTELGTAIRATGFNPQ MARAQGINTNTMVVLGLVISNALVALSGATVAQANGFADVGMGVGTIVIGLASVIIGEVL FSPKSFKTSLIAVILGSIVYRLVIAFVLEMGMPPNDLKLFTAVLVAFALALPLIKEKCAG LRAHG >gi|319805164|gb|ADMF01000015.1| GENE 12 13185 - 13976 239 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 228 1 218 245 96 30 5e-19 MLELQNVKKTFFAGTANEKKALRGVSFTLDDGDFCTVIGSNGAGKSTTLNAIAGVFPIDS GSIKIDGVEISKMPEWKRASMIGRVFQDPMRGTAAGMMISENLAVADRRGRRPTLRWSDR ADRNARFAELVKMLGLGLETRMTAHVGLLSGGQRQALTLLMATLVRPKLLLLDEHTAALD PKTAAKVLEITERLVTEQKLTTLMITHNMRDALRYGNRLIMMHDGRPILDVRGEEKAKLT TVDLLKFFEKAGDGVSDKMLLAS >gi|319805164|gb|ADMF01000015.1| GENE 13 14173 - 15450 1207 425 aa, chain + ## HITS:1 COG:RSc1445 KEGG:ns NR:ns ## COG: RSc1445 COG0477 # Protein_GI_number: 17546164 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 31 415 12 392 400 292 48.0 1e-78 MTEQQKNDAAPQSAQGDLHPENEAQERKGLKVPRTVWALGFVSLLMDISSEMIHALLPLF MAGPLGASAVLIGLVEGAGEGAALITKVFSGAAADRFGHRKLLVFLGYALGVLSKPVFAL ADSVALVFAARVSDRIGKGLRGAPRDAIVAAVTPKPLWGEAYGIRQSLDAAGAFVGPALA SLFLFFWTDDLRSIFWLALIPGALCLLLILMGVEDAPEKPAAKRPAVRRWSDLAECFTVA GPAFRALLVLGILFSLARFSNAFLVLRAADSGISTAAVPLLMVGVNIVFSLACVPIGKLS DHMPAERLLALGLVFLALSDVVFAVWATPVGASLGAALWGLHLGATQGVFSKMTADAAPE EKRATAFGLFSFASGVAALAAGLVAGTIWEFVGPSATFWLGSAFAAAAFVWLLLGLHHRP VCAKS >gi|319805164|gb|ADMF01000015.1| GENE 14 15655 - 16143 332 162 aa, chain + ## HITS:1 COG:PAB2076 KEGG:ns NR:ns ## COG: PAB2076 COG2452 # Protein_GI_number: 14520623 # Func_class: L Replication, recombination and repair # Function: Predicted site-specific integrase-resolvase # Organism: Pyrococcus abyssi # 6 158 57 210 212 105 35.0 5e-23 MEHTHKKKTDGRTIAYARVSSSDQKADLEKQKEILELFCTGRGWRFEMISDFGSGMNYHK KGLLQLLNILVNEDVERLVITQKDRLLRFGAELVFAVCEAKNVEVVIVNKGSDASFDEDL AQDMLEIITIFNARLYGSRNGKNQQLIHGMHKVLRETERLNG >gi|319805164|gb|ADMF01000015.1| GENE 15 16384 - 18483 1104 699 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLPVIAYVLQPDQVIFTPTTENGPLPGIYAASDFIAKWRDWDAGTAGRPARAWHTLFDA VLKAGDRFDFFLLDEALKSYGEELFPDPQERLEWCIRTAIGLERWDEAKRLINELEGYAL PPSGSADRMPADFSSPVRRLRAEWAYARAAAGMEDDILVPTLVDELFALGETQKAEHLIA RAWPAVFSALLSFLQPEENAGKGSDAQETAQWRRTILRVGQNGTLMQQCSSALSFHQRLW RAAAFLYFSQDERDVETGLNELMSLTSLLRPAEEVLEVLALMTVMFAGEDFEVPADCLAW LSCAMDRRRAAVLPARKKAEADIRPHPAEVLTESAEACRAEADRFWLLRSLFMEGNVLDL KKRLAYARFIDRTFFEELLLRVLDVRCAAKASQRDRDALAESQYRLKGHLAVPSNAETAA VLLLVVKVIEAEVLARLSGDLLGQNAGGKAVSGTAAAQKRLMGTAPMKEALDRAARQLGI EFVRYIFGDADGPIVSLGRGAMLALYFAPRSPMNDERFILQESVGPLSPGEYRAEKLLEL WRREASPFKMPEDFLRLVVEAGRRTKPKSADVRLFKPLLIKWPEYFGDDLHQLLWHVRMA VAEQRWADAEAGLFTAAECLLDRAQDAARDETIESLWLEAASLAAWTAAGRVVLVPGIKW MKPYADNEAELIVERLRLGIPDAVKLADLFAELSDAALA >gi|319805164|gb|ADMF01000015.1| GENE 16 18493 - 19044 402 183 aa, chain + ## HITS:1 COG:BH1021 KEGG:ns NR:ns ## COG: BH1021 COG0350 # Protein_GI_number: 15613584 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Bacillus halodurans # 1 167 1 168 175 136 42.0 2e-32 MKHSHIIHHYWTSPCGILDLASIGEELVMCDWVDGWHRAATLNRLTRLTKLPMVEDASSV IDLAQVQLAEYFDQRRQVFTVPLRLIGSEFQTRVWHALTKIPYGKTISYGEIAREVNSPK AVRAVGGAVGANPLSIIIPCHRVVGANGSITGYGGGYAAKRHLLALELGLAADELPFSRG VKE >gi|319805164|gb|ADMF01000015.1| GENE 17 19060 - 19713 641 217 aa, chain - ## HITS:1 COG:RSc1597 KEGG:ns NR:ns ## COG: RSc1597 COG4566 # Protein_GI_number: 17546316 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Ralstonia solanacearum # 20 211 11 203 210 147 41.0 2e-35 MTDQKQTDGSGLKTLEDLQRTVLIRIVDDDAEVRDALSFMLSCRGWQTAAWGSAEEFLKA WRSTPPGCLLLDIRMPGMSGLELQERMKAQNLSLPIIFVTGHGDVPTAVRTLKLGAFDFL EKPVDAEALADAIEAASRVSVEASQGALPKQAVEQILAEMSPREHEITELLKEGLANHDI AERLDLSDRTVQGHRNNIYKKLRVHNLKQFLTVLEGG >gi|319805164|gb|ADMF01000015.1| GENE 18 19710 - 21593 1506 627 aa, chain - ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 34 570 29 545 592 91 22.0 4e-18 MSASDISESAHRANRTDALSSATAQIFQNRPLRVGIISLWEQPVTTEALMNTLETIEKAF APYPVEIYPRIPSPKLEHLIETGNIDVFIASSGFSMRMSPHGVLPVATLITDLQPNPNTG VATTFLVRADEENIKTIADLKDKRLSASYASAFMSYRTGLGEIAVRGYDPEHFFSDIHFT GDSENAAIASRLDTHEADVAMVRACWLEHQPPEVRSRYRVLEPREDPTLHCVHTSRTYPN IMVSVLEGSAPGAAHVIARTLLSIKEIAPGHHWGVATDLRPVNRLYRELKIENYAYLRDI SFKDWLTKNLAWCVLAAAMILGLAFHSWRVGYLVRVRTAELEASIEEERKSQFRLEEMRG RMERMQKATIVGQLSNLIAHELAQPLAAVQYYLDGMKTLLSRQPVNTAMLEKSRVGIEQG LERTKAIVAKVRGYSRNQTRRDRTVSLKTTIDNVLTAISPDLQRSVAFKCESVEGIEVLG DALELELLMRNLIKNAFEAAASAASDSTSGAQEVPTVSVRTEPDPTDKTNRSVLITIENT GLQMTNAAFNELTTPLITTKAAGHGLGVPIAIAIAEASGGRLTFFERPQGGVIAQVRLLR AGSYPSKNTAAAEFSSSSHYDIPPQAS >gi|319805164|gb|ADMF01000015.1| GENE 19 22098 - 23963 2651 621 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 496 604 358 456 484 63 38.0 2e-09 MSANLSRRSFIAGSAAMGGMMLGVSSSAEAKVPSKWDFKADVIVVGAGAAGIPAAIRAVE QGLSVLVVDANYDIGGHAIISQGNTLLGGGNAMQQKYGIEDSPETIFKDLTDWSVTLPNG FADYRFNDRDMQAMIAKESVPTYDWLVKIGVPFLDKKPDNAGAYGAGCSAPRELHFSWTK GANLEAPAGTSGTVLMRSLEDAARKVGVKFLLNFYMDELIVDEKGRVVGLKAHRTPKVLP DGTELKSFRSDGNVESKKDKIVVGAKKAVVLATAGYTDNVTFRRMVDPRLTKEFASAACE YSPQDGSGTLAAIKVGAGLWGLTNAYTERPISLTRGAVIGVRDTYLRWAPESPIFPLVKH SGVALRNWQNAIVVNWVGKRFFEETSSAGLTADSGKLTSYGTANSTRGLMNGTNGAFFKE LDKNPYVQGNWRNIDRTKYNPINFIAAALQINEGSHAPDWSAGPQWAIFDSEAIKRERMH TDEKSVDPEYFFKADTIEELAEKINTNPYMSHKMDPKILAETVAKYNSYVDAGADPDFDK PKPQYKIEKGPFYAAWTSVTLHDCYCGLHVNNACEVLDWEGEKIPGLYAAGEVTGGSSMH GLSRGLIQAYVLGDTFASLKK >gi|319805164|gb|ADMF01000015.1| GENE 20 24000 - 24392 380 130 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRTTSIITLAAAAAVLMMLSPAPEVQAAETMKPEQCLMCHGGSFDALREQTKNWKDEFGS PVQPHQYLDPNAANPHAGAKVVPECTGCHQAHPIPVPKDFKPEPASLSMCYGCHHMENFQ KCSDAGCHEK >gi|319805164|gb|ADMF01000015.1| GENE 21 24481 - 25614 909 377 aa, chain - ## HITS:1 COG:PM0932 KEGG:ns NR:ns ## COG: PM0932 COG0624 # Protein_GI_number: 15602797 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Pasteurella multocida # 9 374 3 367 379 237 36.0 3e-62 MGTTQMFCLNDYLRDLQEVVDLDCGSSNCTGVTRAAEIMKRRFDAIGFAAELVDLGSQAG RGLFAVNQPNADHYDVLFNAHLDTVYPDGTAALRPFTVDKERISGAGCADCKAGVVAIFH ALKNARSQDLNRLSIAVAYNPDEEISSVSSGAWLSSLAQKSRLAVVCEPGRPNGAFVRSR KGRAVWEVVFRGVAAHAGNNPQDGRSAILAAARFTLEVNQLQDYSGKGTSVNVGVIHGGT VCNTVPDLCKLTIDRRCCRDEDGQAIDDAIEALARRSCGDGIHVEAKRLSLSPAMPYSEK NRPLIELVNEAARLEGFEAQWADAGGGSDANRIAAAGTPVIDGAGPAGGGFHSAKEYLLI PTIEPRVRVLSRLLTLL >gi|319805164|gb|ADMF01000015.1| GENE 22 25751 - 28357 2563 868 aa, chain - ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 16 774 78 815 818 605 47.0 1e-173 MTTQDANPVCRMHFNVTGMSCAACQARVEKVVSGLDGVENVAVNLLKNTMEVTPKDASQA NELTQAIEAAVSEAGYGAQRTDPGAKNASAVPSRAETAAAEAAEVKTRLIYSIVFLVLLM YVSMGSMMGLPMPDWLGSHESGLLRGVLQLVLSLPPLFLNRVFFVRGFRALCHRAPSMDS LIAVGAGAAFIYGVWVLAEASYWAGAGQIDHALHLAHSLYFEGAAMIVTLITVGKWLEAR AKGRTTDAIEKLAALAPKTAVVLRDGKEVTVAREAVAAGDLVVLKTGASIPVDGIVTEGT GSVDESAMTGESIPVEKKPGDALTGATLVSSGRFVMKALRVGDDTALAQIIKLVDEATSS KAPIARLADRVSGVFVPVVIGIALLTLVVWLFLGRDFSFALTCAISVLVISCPCALGLAT PTAIMVGTGRGARRGILFKSAEALELLGKIDCAVLDKTGTVTAGKPQVVRIAPAAAGLET PLLMIAASLESASEHPLASAVVAAAKEKNLPTQPISEFEQTAGQGIAAKIGKKLYFAGNA RMVEAFGLTPPPAISAAAQQSAESGETPLFIGQAPQEDAPGMLLGLLGLADPIKPDSAAA IAALKKLGIEVTLLTGDNQTTANAVAKRAGIDRVIAGVLPSGKANEIARLQAMDKRVLMV GDGVNDAPALARADVGAAIGAGTDVAIASADLVLMRSRLGDVPAAVELSRAVMRNIRENL FWAFIYNLIGIPIAAGVFASQGLTLSPMIAAAAMSLSSFSVVSNALRLRFFKPKLETDAD AAPLAAAQPAEPSHKEKQMAQKIIHIEGMHCGHCTQSVEKALKALPGIDAVEVSLKEQEA RVDADLFVTDDMLRATVEGAGFKVTGIE >gi|319805164|gb|ADMF01000015.1| GENE 23 28550 - 29923 842 457 aa, chain - ## HITS:1 COG:VCA0104 KEGG:ns NR:ns ## COG: VCA0104 COG0564 # Protein_GI_number: 15600875 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Vibrio cholerae # 229 447 1 213 221 123 37.0 6e-28 MPRLLSLPLSELFTESSGAASAEYFPSPWHGAPLPIALKARQLAEDAALFSDAPGRRNVL VCRAENDDPVQRAVLLFASQSPADFVLPLPNEALPMADRIAGKTSCGAFEEAARSVEILT MAGTRTSLLAFAESDRARRPPKIARGGAAGLNLTFEHWNRALLDAVESPLAANLLAAAQA RAAGKKLTALASMEWWRGSAPIYDVKWDGMALSPKTTTKPLVEFLLEGIPFASDPRVNSP VTQSLRPRILLEHRDFIAVFKPSGLLSVPGTGGLPNALTIASEMTGTSLTAVHRLDMDTS GILLYGKTPEGIRSLMAAFREGRVEKRYRAILEGTLTAECGLIDFPITTHPLDRLRQIAA LGGRPARTQWRRLSEKNGRTLVDFLPLTGRTHQLRLHAAHPTLGLNAPIAGDPYYSRPGL LVDRPETPLLLHAAEIIFPDPQNGNPIRLVESEPFNL >gi|319805164|gb|ADMF01000015.1| GENE 24 30297 - 31601 1078 434 aa, chain + ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 1 377 25 398 468 75 24.0 2e-13 MMGLALEQLIGMTDVLFLGRYGEAELAAAGVAGIYVMLVMMLGLGYTVGSQSLMSRANGA GRAEEVGAIFRQSAIFMTACGFVIMLVSWFLIGPMFERFIAADAVRKAADDYVFWRLAGL PFAYVGLLARAYFVAVMHTRVITSASIVMVLVNCGLNSLLIFGLGPFPELGIAGAAIASA VSELAALAVYFLEFLRHSASSKLLEVSKHLWRLDWLLQHRIFMLSRWLMLQEAMAFGVWL YFFIVVENAGGERALALSNIVRQLGAVLFLFVHAFGSAAGTIAANYAGAGKPEWIRPMAS LALRLCALVLLPFFLCFALFPSLVLGILTDLPEVISDAKPSFYVMVLAYALTTPAYLYFF VIGALGFAKESFRMTVTAVAAYGVYIAVLNLFTPPTAVYWTADIVYGLTLWLGVTVVWRR ARAAGFRSAAADGF >gi|319805164|gb|ADMF01000015.1| GENE 25 32101 - 32376 491 91 aa, chain + ## HITS:1 COG:BS_hbs KEGG:ns NR:ns ## COG: BS_hbs COG0776 # Protein_GI_number: 16079336 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus subtilis # 1 91 1 91 92 89 57.0 1e-18 MNKTELTAAVAQKAGLSKSDAAKVLGAFFETVSEELSKGQAVQIIGFGNFEVADYKARTG RNPQTGAVLEIPAGKRPKFTAGSALKKAVAG >gi|319805164|gb|ADMF01000015.1| GENE 26 32760 - 34097 1710 445 aa, chain + ## HITS:1 COG:PA1183 KEGG:ns NR:ns ## COG: PA1183 COG1301 # Protein_GI_number: 15596380 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Pseudomonas aeruginosa # 9 422 3 416 436 543 71.0 1e-154 MSEAATNKKTPIYKVLYFQVICAIVIGIVLGAVWPEVGEKMKPFGDGFIRLIKMIIAPVI FCTVVTGIAGMENMKKVGKTGGLALLYFEVVSTIALIIGLVIVNVVEPGSGMHVDPATLD QSAVSAYTGPGKMQTTTQFLMNVIPSTVVGAFAQGDILQVLFFSILFGFALHKFGGRGTL VFDLIEKSSQILFQIVGMIMRVAPIGAFGAMAFTIGKYGIASLLPLAKLMGTFYATCLLF IFIVLGAICRIHGFSVMRYIAYIKEELLIVLGTSSSESVLPRMMTKMERAGVSRSVVGLV IPTGYSFNLDGTAIYLTMAAVFIAQACDVNMTIMQQVTLLAVLLLTSKGAAGVTGSGFIV LAATLSAVGHVPVAGLALILGIDRFMSEARALTNMIGNGIACVVVGHWCGEVKNEALHMY LSTPSQKAKYYAADQAEHEEALEKH >gi|319805164|gb|ADMF01000015.1| GENE 27 34278 - 35048 600 256 aa, chain + ## HITS:1 COG:no KEGG:Veis_2606 NR:ns ## KEGG: Veis_2606 # Name: not_defined # Def: hypothetical protein # Organism: V.eiseniae # Pathway: not_defined # 7 250 29 274 279 194 46.0 2e-48 MTIEITGSMAGHADRHTESSLAESFENAYFTAPWDIYEGPLKDFPKEKIRLEAEPLVLFA HGSSGIGEPLKAFGRWLASFGIGFLCPNSFVLKDRITYTSPVSRDDYERIHVMRSAELAN AAARLTEVPGFDGRYIVAGTSEGGVAAARFQAPQGQAECARMIFSWPCEDNYHVAAHRTA IPQDMPVLNEMSAADKFFSQANSWLDNPSALGHAGRTLANHTDASIVLIPGAPHTLFALP QTQSAVEGFLERVLEL >gi|319805164|gb|ADMF01000015.1| GENE 28 35152 - 36522 1420 456 aa, chain - ## HITS:1 COG:PM0933 KEGG:ns NR:ns ## COG: PM0933 COG3069 # Protein_GI_number: 15602798 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 8 456 6 461 462 240 37.0 3e-63 MNSIFPWLGIAVLILCGWAIVKKYQVNMVLLLGGLILNLLAFWGGAEIFPKKFSATGIVG FDLIELLRTISVSQVSGVGFLILISGGFAAYMQAIGASDRFVTVCAKPLSLIKNPYLILA AVFIVGHCLGLVITSAAGLAMLMVVTVYPLIIRVGCSPLAAAAVVASVLAIGYAPASGTA NFASELVHLDPIEYLVRYQLPMAVPTILAMAAAHVVTQYWFDKREGRGVVADLSELEQKR EKLEQTPAFYACLPLLPIALLLVFNKFVWGVSMNVATAMFIAWIASFFIDLITRRNIKES FDLSFAMFKGMGSILTSTVGLIFVAAFFAKGLQNIGIVALLMHGADSIGLGYTGSSVVLS AIVGVVTVLTGSGVAAFTSLGQLVPAAAQSFGENGISMMLMMHTASEMLRAMSPVAGVII IVAGFAKVNPLTMVKRTIVPCLTGYVVMLITVSVLF >gi|319805164|gb|ADMF01000015.1| GENE 29 36663 - 37094 396 143 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFKPIRSCIFAGALACALTGTVLAAGPLKPVDNPAPIAAKGIGQTQALNAVKNAAQLRKF RVVSTHGNVVKLAYPSGPRAQKFEAQFDVVYEGSKIAVKYASSRGLDAGPCQNDAKQICL HRNVNKWMANLASDITKELGRAH >gi|319805164|gb|ADMF01000015.1| GENE 30 37310 - 39691 2904 793 aa, chain - ## HITS:1 COG:VC2077 KEGG:ns NR:ns ## COG: VC2077 COG0370 # Protein_GI_number: 15642077 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Vibrio cholerae # 3 779 2 750 758 680 44.0 0 MSQHIVCVVGNPNCGKTTFFNALTGSRQRVGNWPGVTVDKKTGNFEYRNEKIELVDLPGI YSITPAASSGEDERVARDYILSGEAEAVINIVDASNLERNLYLTAQLIEMRVPMIVVVNM LDIAKQHRLEIRLEKLQEALGCPVVGIVASRETGLNDVKDTLVNFLEHPTIPPMAVEFDE KITKAIAAVSEDLKKQGVERAPWFASQFMERAPGLEEKLPNVNAANVEKIVADLDKEYDG DLDIAIANARYNLVANIAEKAIVRVGEASATLTDKIDRVVLNRWLGLPIFLFIMYVMFLF TQNLGGAFIDFFDILVGGVMVDGFSELLTNIGSPEWLTVFLANGIGGGLQTVSTFIPVVF FLFLFLALLEDSGYMARAAFVMDRLMRALGLPGKAFVPLLVGFGCGVPAVMATRTMDRAS DRIITVLMAPFMSCGARLPVYVLFATAFWPENGQNLVFLLYIIGILAAILTGFLLKHAAL PGAASAFVMEIPPYHIPTFKGVMLRTWDRVKTFLFRAGKVIVSIVAVLAFLNSLGTDGTF GNEDSDKSVLSEIGRDIVPIFAPMGVQEQNWPAAVGVFTGIFAKEAVVGTLNSLYDTITL AKAEEEKAADGAAPAEEAAPEEEEEGGWSFTDTFNEAVSTTWENLKGLGDALADPMGIKV ESDLSDTAAEAEAQEVSAGTFDTIKILFGSQSAAFAYLLMVLLYMPCCAAIAAIYREVGA AWTLFSASWCTVLGYTSAVIFYRAVNFSAAPVYATVAILLSLAAIVGMYFWMKTFAKKED DNTPKVIPIHSAH >gi|319805164|gb|ADMF01000015.1| GENE 31 39743 - 39970 344 75 aa, chain - ## HITS:1 COG:ECs4250 KEGG:ns NR:ns ## COG: ECs4250 COG1918 # Protein_GI_number: 15833504 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Escherichia coli O157:H7 # 13 75 10 73 75 62 48.0 2e-10 MFLKELPVGSKGKIIGFGKEHPEYRRRLVMLGATPGTTFEVVRIAPLGDPIEIRVRGSFI SVRRDEAMLMEVEKL >gi|319805164|gb|ADMF01000015.1| GENE 32 39983 - 40219 247 78 aa, chain - ## HITS:1 COG:no KEGG:Dd703_2073 NR:ns ## KEGG: Dd703_2073 # Name: not_defined # Def: FeoA family protein # Organism: D.dadantii # Pathway: not_defined # 7 77 5 75 82 62 45.0 5e-09 MTEPRQIRTLATLDLNEPATVARMKLPEAEVSRLSDLGMRIGSTVRVLQASEGEPLLVAV GDGRIGVNFAVAQKIYVY >gi|319805164|gb|ADMF01000015.1| GENE 33 40486 - 41028 512 180 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPFESGHPGSLPAGSHTRMPVFLFPDVRQPFSGLYFTSRTTYNAPKNLLTVMKLWLKISQ GLAALLLSAAALSLLLFAGALILGLAAASLIAAAGLFLAAPDEAKTGLKNVAAALEKLAD RFAESVNDMGQVVLACFGAQQAAPNTPHESGSGENMSSPDNTSNSTRTATDDPSGPHAAQ >gi|319805164|gb|ADMF01000015.1| GENE 34 41081 - 41695 569 204 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDPKEFVRSICHGRARIRHASLCGLSPEEVESLTTMIAGFDGITSVKLNPRVGSLLVTW DETKTNAESLLAAAQFFLPDEPAAEEAAEVFEGAQDQDAQPEAAKPPCCAGACLAEHPAK LVREAGSLVKSGAHRALDLLAPVVAPDVKAGGRTRRVTQNRLMAAGYALSLAGLAFRGAK AHLLFGALFTVLLGVHLYQHRRVL >gi|319805164|gb|ADMF01000015.1| GENE 35 41720 - 44203 2890 827 aa, chain - ## HITS:1 COG:FN1190 KEGG:ns NR:ns ## COG: FN1190 COG2217 # Protein_GI_number: 19704525 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Fusobacterium nucleatum # 256 782 199 726 735 365 35.0 1e-100 MHFYLKHAVGNRERWKTDDTLSHASAVIIANEVAAIPGVTGLVVNPRIGSVTLTVADAAA KARTLAYFESLAVNPPILRPDRAVIAAEDLEAAKRCGEMALQPLRREDLPPGIVPRTIYE IERGFTTMPLLNVFSRLRDLLGKIFPGLFMIGRTAAKAAQVGQAMGKAALTRRTGEAPAP IEDDAELDFSSLARYIFLRPFLPMVVNIGNAVLDSIPYLIEGVKNAFRGKLNVSVLDASA IFVSLLRLDFGTVGLLTLLLGLGDMLERYTRKKSLASLADQLAIKVDQVWVRLPDGQLAQ KQLKDLSKEDLVVVRSGSVIPVDGVVVSGDAAVNQATMTGEPLPVHRTVGGSVFAGTVVE DGEIDIRPTALGDASRLSQIVSFIQNSEAAKAGIQGKAERLADAIVPYNFLLAGLVFFFT RDLTRTASVLMVDYSCALRLATPLAILTAMRNGTEKGVLVKGGRYLEALSEVDTVVFDKT GTLTQSTPVLSDVIPVDGVTSEEELLRLASCLEEHFPHPVSRAIVRQAQERGVIHENEVH DTEVRYIVAHGICSSVAGRKCFLGSRHFVQDDEGIDISPAKDAIARLSSEGKSILYLAVG DQLAGVLGIEDPLRPEAKEAIAALRERGITKIMMLTGDDTRTAAHVAAKLGLDGFHAQVL PQDKAKHVLELKAQGRKVLMVGDGINDSPALSAAHVGATLRDGTDIAQEVADVVLTRNNL ADLPTAIELGRATMGRIHENFAVSVSLNTCFLAGGLTGMLMPAIGALLHNATTIGVCLNA MRPTLGKSKSFTEAVSEIQANLHGTLSKIENSAPESEKPINLPFTQA >gi|319805164|gb|ADMF01000015.1| GENE 36 44398 - 44679 566 93 aa, chain - ## HITS:1 COG:no KEGG:DvMF_1418 NR:ns ## KEGG: DvMF_1418 # Name: not_defined # Def: hypothetical protein # Organism: D.vulgaris_Miyazaki_F # Pathway: not_defined # 3 79 1 77 93 77 48.0 1e-13 MALNQATKYGLFFVGGIAVGALGMALVSRGKLNIKPLATDLLASGIDLRDKALAAVDGVK EDLADVVAEAQVKQQEKKEAQEKKEAVPAAADC >gi|319805164|gb|ADMF01000015.1| GENE 37 45290 - 46486 600 398 aa, chain + ## HITS:1 COG:aq_698 KEGG:ns NR:ns ## COG: aq_698 COG0845 # Protein_GI_number: 15606100 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Aquifex aeolicus # 71 361 62 352 374 87 24.0 3e-17 MQLAALIAAWPMKILSREYVFAAWTAAAVLILSGCSESQTTSAANNERQAPITVSVILEP AYQPQLIQAAGSVAASARIEAASRLAAYIEEIPVKEGDLLQKGDVLFKLDSKDVLAAIHA ADGKLKAAQAALKDAELDREKIDALYREGLVSNNDWRKATLKRDGARADLAQAQGFASAA HGELEYIIGKSPREGRVVRVLRRAGDMAVPGLPIVVLDSEEAPKFEFRVPQSAAQYAKPG VIGRVKLDGINEPLEVVIENASASADPLARTYFVRAGFKALASREAASVRPGMFGRIEIT AGKASRRFVPESALTRLGGLEGAFVLQTCRHADAGQNQCAYFHWLRLGTRENGLAEVLAG LEDLGNSPVRFVDRPKHQLTDGDRVTEADSRAQTGDQQ >gi|319805164|gb|ADMF01000015.1| GENE 38 46483 - 49803 2947 1106 aa, chain + ## HITS:1 COG:aq_695 KEGG:ns NR:ns ## COG: aq_695 COG0841 # Protein_GI_number: 15606099 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Aquifex aeolicus # 5 1082 2 1055 1082 523 33.0 1e-148 MNPRHTLTGQLAGGFIESKLTLVLMIAALIFGIWAVLSTPREENPQISMPAAAVQAVLPG AEPDEMEAKVIRPLEAIINQIPGVDHYWSTAVDSAAVVVVQFKVGENKEESLVKLADRIV GGRAELPADMLGPWVKSADVDDVPILAVSLVSEKYGDEGLRRIAWDVLDRLMGLEDISTV DVIGGRDRELIVEIDPARLESFGLSFASVTAAVRAAGSAGPLGTTVTKGTEARVRLANAI KSAADLKRLVVGFSPAGNPVHLEDVAKIRDGATQQAAASSRFGWGRASSQYESAAGGIVE HPSVSLAIAKRKNANAVVVADEAIARIERMKGTVIPADVDVVVTRDDGAKANDAVNTLIE HLAIAVIAVVTVTLVFLGWRAAVIVAVTVPLILAITLGVVGLSGFTINRLTLYALIIALG LLVDDSIVVIENIVRHYGLSKLSGRQDRSNRAIEAAGEIGSATLLATITVMVVFASLIPA LTGMPKQYFYPVGFTVPVALAASFLIAYTVAPWAARRWIPQPPIDSSSAGGRTLPGGRFG KLYSIPARLLIGHPRREIVFVCATAFLCIAVFIMPFGQCLIPGGLNSPTPAWGVEMGFLP KDNKNTFNVTIELPVGTPVEALDRAVRDTAAEVAKIPEVVNWQSWAGLSGVADFNSMMRM TPAKGSEIGAVRVNLTDKNSGRRSSIEIARELRTALRSVSDAYPGSTIQVVEDPPGPPLR GTIYAEIYANDPEELRWLADRTQKEFRKTYDVVEVTNTQKADQTEWRLSIDREKAVAAGV LPAAAAFELKNLASGSIIGWAHADGERSPQPIRLEIPYAEEFDPTLLSGITIAGAAGVRV PLSSIIKVEKTTAARRIEKKDGVRMAAVGGEMGSTTPTYAVLDLNNRLRGMALPEGGKLA TGNLTWSDERPDLTQSPAVLLWQGEMRMMLDSYRDLAVSLCLSLGSIFLIFVAYYRSFAL ALIALSAVPLCFIGLIPGHWLFGTQFSASSLVGVTALAGVVVRSSLLIIDFVLDYLKAGL PLKDALIDAGAVRLRPILLTTLAIILGSVILIPDPVFGGLAITFIFGTTASTLFTIFLIP ILLNVYFTRHPYRTSEEGAGMTAEAN >gi|319805164|gb|ADMF01000015.1| GENE 39 49923 - 50597 572 224 aa, chain + ## HITS:1 COG:yeaS KEGG:ns NR:ns ## COG: yeaS COG1280 # Protein_GI_number: 16129752 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli K12 # 1 220 1 207 212 155 43.0 4e-38 MFEQFGIINPWIYIAGAFMIVIAPGPNSLYVLKTSVLDGRRAGCAGLLAVLIGDAVLIFL AYLGVAAMIKSHPLAFSMVKIGGGIYLAWIGAKVIWNTFFVKRAKPAGTAAELSVSEQTK PTKGTALRAFRTALGLSLTNPKSILFYVSFFVQFIDSSYAHPGISYFILAMILESFSVMW FAVLITLGAALLRCLARVPSLRKLGNTALGSLFLFFASKLVLDA >gi|319805164|gb|ADMF01000015.1| GENE 40 50891 - 52435 1287 514 aa, chain + ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 7 511 8 510 512 457 47.0 1e-128 MRKSLLSAVCAVSLAAAATLPSGSQARGITVAVGSSFTTLDPYQATDLLSRTVAKSFYEG LYSFDKNLKPVPQLAESYEVSEDGLVYTFKLRDGVKFHDGTDFTAEAVKLNFERVLNPDN HLSRRSFFNFIGRIEVVDRLHVKFVLSRRTPGFLQRLANGSGQMICPNTIKTMDGRGIAF NPCGTGPYLLKDYNPSERLVVVKNPNYRVKGLPKLDSITWLPVAENASRAAMLRTKEAAF IQPMPVEQVKDIENDPELKLNVVPSIMMRYLSINNAHKPFDDVRVRKAISLAINREALCK VAFSGYARPATGVLPLPIPSAVDLGVPKYDPQEAKRLLAEAGFPNGFSTKLWSGYNNSTS SKVIQFIQQQLAQVGIKTETRILEAGQRVSLVEANKVPSESPNRLYYIGWSNSTVEPDWG MRPIFDSREMPPKLSNEGYYNNPKVDELFDKAVNEPDQKKRDAIYREVQEILWDEVPVAF LVFEDSTTASNVHLKNFNALPDTGMEFYEAEWVE >gi|319805164|gb|ADMF01000015.1| GENE 41 52637 - 54454 1691 605 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 19 589 20 456 484 104 25.0 6e-22 MVNISRRNVLISTAFAGMTGLSGTASAAAAPCSAAMPKKWNYEADVVIIGAGAVGLPAAI GARDAGLSVLVVDANYDIGGHAITSGGNVPLGGGTSFQKKYGIKDSPELVFKDLTDWSIV ESGGMPDYRYNDRAVQHALAFNMAPAFEFLLANGVPFVDQAPDNSGAHAVGLSARREHHT LWFKGQSAESPAGAGGTLLMRSLEASARKKGVQFLLNYHMDELYREAEGDRRVVGLKAHY SPKVNPETGKPLSSFKSEGNISETSETIVVHAKKALVIATGGNAGNVEFRRIFDPRLTAE YANAAEEYSPQDASGELAAMAIGASLWGTANQAMDRNGSLRKRPLVGVRTNYIRWTPKSP LYPLIKHSGLNIRDWQDAIIVNQVGKRFYNELESGYPNGSHEGFFKDGKPYVHGDWRNTT RKPFRPRNYIDAALALNEGSAEPDFSAGPQWAIFDAKALERENITLTPGICDPELFFEAD TLEALAAKINTSPWQKWKMDGKVLAESVARYNTFVKAGKDEDFDKPAPQYAIETGPFYAA WATFAVHDSYAGLRIDKDCRVVDLSGKPIAGLWCGGESAGGSSQHGLGRCITQGYIIGQR VAALK >gi|319805164|gb|ADMF01000015.1| GENE 42 54557 - 55732 1025 391 aa, chain - ## HITS:1 COG:BS_patB KEGG:ns NR:ns ## COG: BS_patB COG1168 # Protein_GI_number: 16080196 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Bacillus subtilis # 4 382 2 385 387 286 38.0 5e-77 MQYDFDCIIDRTQIDSVKWTAYPKDVLPLWVADSDFQSPEPVVAAVKKIVDTKVFGYPNS HSGVLERAAVSWCRRKYNFTFSESEIHYCPSMSFGLAIAIRAFTQPGGKVLMQTPIYPPF TELTKANGRVCSMNPLKFVNGRYEVDFEDFERRAADPDCSLFLLCSPHNPTGRVFSADEL NRFVEICAAHDVVILSDEVHSGFVFKGEHAFLPGLSETAARISVWGSSPSKTFNTAGLRA ASLGSKNPELNAKLKAELTASQPDRSVFSQTAFAAAWTECDDYGEQVAAYVKKNLEFAVE FFRTRIPSIKTYLPDATYLMWLDCSALGFKTQTELSEFFVKEAKVALNPGESFGPGGEQH MRLNTACPRSTLETGLERIEAAAARRCALLG >gi|319805164|gb|ADMF01000015.1| GENE 43 55913 - 56494 717 193 aa, chain - ## HITS:1 COG:YPO0670 KEGG:ns NR:ns ## COG: YPO0670 COG2249 # Protein_GI_number: 16120995 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Yersinia pestis # 2 188 3 191 194 190 48.0 1e-48 MNFLIINAGCRINGQGGTLSAAMAELAERTLKHHGHCVVVTDLNEPYVVADEVKKILEAD VLIFQTPGWWMTTPWQLIKYEDDVFVSPELCGGDGRTRSDPEKKYGSGGFLTNKRYVLST TWNAPLEAFTDPHQFFEGKGLDGLFMPFHKTMQFLGLKAYPSFMVNDVFKHPTIEADFKR WEAYLTEHFGQNA >gi|319805164|gb|ADMF01000015.1| GENE 44 56574 - 57503 917 309 aa, chain - ## HITS:1 COG:FN1038 KEGG:ns NR:ns ## COG: FN1038 COG0697 # Protein_GI_number: 19704373 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 17 305 12 290 303 177 37.0 3e-44 MSSSSSDTLFQLRQSAILLLTAMIWGATFVAQSLGMDSVGPFTFTTTRMLLGAFFLLPIV LLRRKRLAAEKPAEAARRSAPQYRRTLLMGGILCGLCLFGGESLQQFGFVHDTEVGKSGF ITALYIVFVPIISLFLGRRGSPLLWAAVALSLVGLWFLCIPPEGFTIAAGDLFVLACAVV FSLHILVIGRYVLLVDAVELSMMQFFCGSILAFFAMLALESPTWIGWQTALPAMLWAGIM SNGIAYTLQIVGQRGMNDTTSSLILSLESVFSVISGWLILNEVLSVREGLGCVLMAAAVV LAQLPGNKK >gi|319805164|gb|ADMF01000015.1| GENE 45 58025 - 58603 542 192 aa, chain + ## HITS:1 COG:RSc2100 KEGG:ns NR:ns ## COG: RSc2100 COG2119 # Protein_GI_number: 17546819 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 9 190 19 200 204 172 53.0 3e-43 MFEIFQTTLLSTGVVAAAEIGDKTMLLAVFLAARFRKPWTIILGIFVATFLNHVIAGALG ATLANFISADLLRWILIVSFIAMGIWILIPDKIDEGGNDDRLRRFGVFGTTVILFFIAEV GDKTQVATVALAARYPAEAFWVVCGTTLGLMIADAPAVFIGNKLAEKISMKLMRQIAAAV FFILAVVAYLEA >gi|319805164|gb|ADMF01000015.1| GENE 46 58703 - 58972 124 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVAAIVPSCLQKYWLSKADRGAKPFALQLYSKTTESSVDKGALDGTLPAALLSASQKSRE KSEMGLRSAGSGVFGAGSDRRLAASENDV >gi|319805164|gb|ADMF01000015.1| GENE 47 59070 - 59609 578 179 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAFRKIIKTGDPDDIRTGFAGAVWDIVKMSSLIGAFVAFFSGMVLKGKLLMLAAESWTSI SLVLLVLFLALFLSLGAVLLQLPGLIHRKREHQEAQSLSDTRLVLWVFSTFAVSWFSTFF FSVTSDITAEALRGFGMGEYLYDFPVALIFFYVVGPAVVVNVAFGSWVRGNIRRLLPEV >gi|319805164|gb|ADMF01000015.1| GENE 48 59684 - 60415 642 243 aa, chain - ## HITS:1 COG:CAC2967 KEGG:ns NR:ns ## COG: CAC2967 COG3527 # Protein_GI_number: 15896220 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Clostridium acetobutylicum # 1 197 6 197 238 107 31.0 2e-23 MPNLYQLSTLSALLLGDFEPSLSIGELKRHGTLGIGTFEGLGGELIMLDGVVWNGTHTGE AAPAADIEKTPFACVIDWQPPASAVKLPAVGSLDNLRAVLDEAAKGAENRVLAVRLQVFQ ADVTFRSFAPAPKPWKPMKDMLFSQKITAERNVQAEIIGFRFPGYLESINMPGWHLHVLT APNDSGKRFGGHLLNITADAGIEAQWMAADGLELTFPTGEAGRIYDALPLDQDLREITKA AEG >gi|319805164|gb|ADMF01000015.1| GENE 49 60578 - 61894 1635 438 aa, chain - ## HITS:1 COG:RSc1326 KEGG:ns NR:ns ## COG: RSc1326 COG0436 # Protein_GI_number: 17546045 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Ralstonia solanacearum # 1 406 1 406 413 654 73.0 0 MKQIKKSSKLDNVLYDIRGPIMDKAKQMEAEGRRLIKLNIGNLAVFGFDPPEEVMRDMIY NLPNSAGYSDSKGMFAARKAVMHYTQDKQIEGVTLEDIYLGNGASDLITMATNALLDEGD ELLVPTPDYPLWTAVTSLAGAKPVHYLCDEEKGWIPNIDDIRAKVGPRTKGIVVINPNNP TGVLYPNSVLLDIIQVARENGLVILADEVYDKILYDGIKHTSMAALSHDVLTLTFNSLSK AYRACGYRAGWMVISGDKSNAKDFIEGLNMLANMKLCANVPGQYAIQTALGGYQSINDLI CEGGRLRRQRDIAYEMLSAIPGVSVVHPCASLYMFPRLDPDVYPIEDDREFFKELLEATN VVLVQGTGFNWPKPDHFRMVFLPYEWELRDAINRIAKFLADYRKRHPGKKTFPEDSVQPK SKEEIARQAALAEAKDPA >gi|319805164|gb|ADMF01000015.1| GENE 50 62252 - 62893 646 213 aa, chain - ## HITS:1 COG:ZhisI_1 KEGG:ns NR:ns ## COG: ZhisI_1 COG0139 # Protein_GI_number: 15802505 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Escherichia coli O157:H7 EDL933 # 1 112 1 112 112 158 63.0 8e-39 MLKKEDINALNWAKAGDLMPAIVQDACSGQVLMLGFMNREAVDKTLESGKVTFWSRTKRR LWTKGETSEHWLHLVDIGTDCDRDSLLILANPNGPTCHRGTTSCFSPIEHRWNFLRELEV LLESRRGASPEESYTARLYAAGTKRIAQKVGEEGVETALAATVHDKEELKNEAADLVYHL LVLLADADLELADVIDVLKARHKDRQREHLLKC >gi|319805164|gb|ADMF01000015.1| GENE 51 62887 - 63663 548 258 aa, chain - ## HITS:1 COG:ECs2826 KEGG:ns NR:ns ## COG: ECs2826 COG0107 # Protein_GI_number: 15832080 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Escherichia coli O157:H7 # 1 258 1 258 258 436 79.0 1e-122 MLAKRIIPCLDVKDGVVVKGVKFRGHEVMGEIVPLARRYAEEGADELVFYDITASSDGRV VDKSWISRVAEAIDIPFCVAGGIRSIEDAGRLLAFGADKISVNSPALADPTLISRLAERF GVQCVVVGIDSWHDEKSGEYWVNQYTGDEKKTRVTQWRTLDWVEEVQRRGAGEIVLNMMN QDGVRQGYDLTQLSAVRAVCKVPLIASGGAGTMEHFLDAFETAHADGALAASVFHKKIIN IGELKTYLREHNIEVRTC >gi|319805164|gb|ADMF01000015.1| GENE 52 63645 - 64382 806 245 aa, chain - ## HITS:1 COG:hisA KEGG:ns NR:ns ## COG: hisA COG0106 # Protein_GI_number: 16129965 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Escherichia coli K12 # 1 244 2 245 246 320 64.0 2e-87 MIIPAIDLIDGCVVRLHQGDYGARRDYGEDPLARLQRYQASGAQLLHIVDLTGAKDPKAR QIPLLRELLSSLSIPVQTGGGIRSADDVRSLLDAGAARVVVGSAAVKRTDEVAGWMKTFG ADKLVLALDVRINKAGNAEVAVSGWQENSGVLMDDLIRAFEPAGLRYVLTTDISKDGTLA GPNTALYAKLAQTFPNIDFQASGGIGSLDDIRAVSHTGAAGVIVGRALLEGKFTLEEAIE CWPNE >gi|319805164|gb|ADMF01000015.1| GENE 53 64379 - 64987 531 202 aa, chain - ## HITS:1 COG:STM2075 KEGG:ns NR:ns ## COG: STM2075 COG0118 # Protein_GI_number: 16765405 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Salmonella typhimurium LT2 # 1 198 2 195 197 246 61.0 3e-65 MKAVILDTGCANLASLAFAVKRLGVEPLITREAADIRSADRIFLPGVGTAKAAMTALTER GLPELIREAHQPLLGICLGEQLLGRRSEETGGVGLLGLIDADVRQLNAPGLPLPHMGWNR VFPKFESPQAKLLFKNIEPGEWFYFVHSFAMPDGPAAIASCTYGEPFAAAAASENFMGVQ FHPERSGKAGARLLANFLGAAA >gi|319805164|gb|ADMF01000015.1| GENE 54 64984 - 66078 1132 364 aa, chain - ## HITS:1 COG:STM2074_2 KEGG:ns NR:ns ## COG: STM2074_2 COG0131 # Protein_GI_number: 16765404 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Salmonella typhimurium LT2 # 174 364 16 206 206 302 76.0 8e-82 MKERILFVDRDGTILEEPHDFQVDSFEKMRFVEGVLPALKALREAGWKLVMVSNQDGLGT ASFPAETFKGPHELMMQILESQGAHFDEVLICPHMPGEGCSCRKPNTGLVKQYLKRGVLD KHNSYVIGDRETDLTLAKNMGLTGLRVGPDGQSWAAIEKRLLESLPAAPAQPVRDRHSAV ERVTKETQISVEVWLDRSGENDISTGIGFFDHMLDQIAVHGGIRLHLHAKGDLQIDDHHT VEDTGLALGEALRLALGDKRGIRRFGFLLPMDEALARCALDISGRPYLTFKAKFKHRHVG DLSTEMIEHFFRSLSQTMGITLNLKAKGGNDHHVAESLFKAFGRTLRDAVRVEGTELPSS KGVL >gi|319805164|gb|ADMF01000015.1| GENE 55 66075 - 67217 1094 380 aa, chain - ## HITS:1 COG:hisC KEGG:ns NR:ns ## COG: hisC COG0079 # Protein_GI_number: 16129962 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Escherichia coli K12 # 15 367 9 352 356 376 55.0 1e-104 MADYCAEIAEAPERLARPEVQKLTPYQSARRIVAAAGGRGDIWLNANESAESVPMALQTE RFNRYPEPQPEAVVEAYASYAGVSPEQILVTRGGDEGIELLVRTFCRPGEDAVLQFPPTY GMYAVSAETNGAKVINLITAPDRGWVPDAAEASHTLDTRPEVKLVFACSPGNPTGTLIPM GVLRKLAQVAAGRALLVIDEAYIEFSPADTAVDLLKEFPHVVIIRTLSKAFALAGLRCGF LLSSPGVIGMLKKVIAPYPIPSPVADLAAQALTPAAVSAMRQRAAAAVMRRCELEVALED LPGVEAVFPSASNFLLAEFSDGPQVFKAMWDRGIILRDQNRQPTLANCIRITVGTQDEND ELLGALREVLGAGASEGDVK >gi|319805164|gb|ADMF01000015.1| GENE 56 67219 - 68538 1469 439 aa, chain - ## HITS:1 COG:STM2072 KEGG:ns NR:ns ## COG: STM2072 COG0141 # Protein_GI_number: 16765402 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Salmonella typhimurium LT2 # 5 436 2 433 434 536 64.0 1e-152 MTNFNFSDIIEWDALSEAERTDILRRPAVMAGDKITAVVSGILDEVESRGDAALRDFSAK FDRTEVKNFKVSKAEVDAAISRLSPEFIKALQTAAKNIEKFHSAEVLETVTVETMPGVVC QQVTRPIGAVGLYIPGGTAPLFSTVLMLGIPAKIAGCSRVILCSPPPIADPILAAARLCG IDEIYQVGGAQAIAAMAFGTETIPSVSKIFGPGNAYVTEAKRQVSRRPDGAAIDMPAGPS EVLVIADAEADPRFVAADLLSQAEHGPDSQVVLLTPSKTLAKAVAQAAAKELETLPRRAI AEKSLSASRLIVVKDLKECVEVSNRYAPEHLILQTRNARELVPFVQNAGSVFVGDWSPES GGDYATGTNHVLPTYGCAAAYSSLGLADFTKRMTVQEMTPQGFSELGEAIAILAHAEQLD AHRNAVLVRLEKLSKKIGG >gi|319805164|gb|ADMF01000015.1| GENE 57 68544 - 69443 950 299 aa, chain - ## HITS:1 COG:hisG KEGG:ns NR:ns ## COG: hisG COG0040 # Protein_GI_number: 16129960 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Escherichia coli K12 # 1 299 1 299 299 440 72.0 1e-123 MTENNRLRLAMQKSGRLSDDSQDLLERCGLKVRFHSQRLLAVAENMPVEILRVRDDDIPG LVMDGVVDLGIIGENVLEETVLARRSQGEEPKFRMLKRFDFGGCRLSVAIPTDETWGGLE SLNGRRIATSYPQLLKRCFDERGLTFKPCLLTGSVEVAPRAGLADAICDLVSTGATLEAN GLKEVEVVYRSKACLIAKAEPFDNEKAALVERLLVRMQGVARARECKYIMLHAPKAKLAE ITKLLPGAEHPTILPLAGSTDHVALHMVSRESLFWETMEGLKALGASSILVLPIEKMME >gi|319805164|gb|ADMF01000015.1| GENE 58 69674 - 69934 95 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVVVMAAEGEAVHDNAPTNGNVVYSEKVLHVLYGIYISAEELSSIMPRPSAVWECFRDAF GASSHCRRTSNASEQCQREFFLRRNV >gi|319805164|gb|ADMF01000015.1| GENE 59 70103 - 71929 2523 608 aa, chain + ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 3 607 4 611 611 793 63.0 0 MQLTKRAFLLSGAALAVSAASGAFAMGTPSGFAVVGFAKQGDLGEVIVNPYKISPLTAVI KNGGYELLTAHVRVVPKDGGQEIAYDVSKAQLLTHAGIPVFGLYADYSNKVEVQYSYRFD GKEVKGEHTYTIYCGPLRGIESGAAGEKNLMFDVEVKKVDPEFKDRLYFVNNFGNAHGAD TRAVWNNPEGGALTWSFIPKIAIIDMTGAIRWYLDASTIWDPESIYTKGVMMGFKQNDDG AISWGYGSTYVKYDIMGRKAFNRRLPAGYSDFSHSLDPMPNGHYLLRVASADLRRLDQKR VRTVRDMIIEVDAGGRVVDEWRLFDILDPYRSNVIKALDQGAVCLNIDPSKAGHTLTAED LAKQETSANFGDFAGTGPGRNWAHVNSVDYDPTDDSIIISSRHQSAIIKIGRDKKVKWIL GAPRGWRSPWKEALLTPVDAQGKPLKCGDAECGDAFDWTWTQHTAWRIDSKSDKNVIWVS VFDNGDARGMEQPALPEMKYSRAVIYKIDQVKRTVEQVWEYGKERGHNWYSPVTSLTEYQ PDKNSVFVYSATAGADFDLTTGAMKGLPNPYIDEFRWGEKEPAVEIQLHNTMGYQAWPFS VKKAFTDN >gi|319805164|gb|ADMF01000015.1| GENE 60 72176 - 73165 973 329 aa, chain + ## HITS:1 COG:yddG KEGG:ns NR:ns ## COG: yddG COG0697 # Protein_GI_number: 16129432 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli K12 # 5 299 1 293 293 188 38.0 1e-47 MSSAMTTQRATLIGLLAPLCWGMGVSLVRGIAEGFGLAQGQTLLYITAAVCLFFVIGIPD LRTVDRRYLIFGLPTANASSLCFTLAIFFSAGGTQTMEAAMVNYLWPALTLLFAVVFNGV RSRWWIAPGMVLAFCGIVEILAGGQGFSLEGFISRLLEHPLSYILAVGAAVTWAAFSSMT RAWGGSTNLACLIFCINASIYGVLWLCGFGTQMVGEPSAHGWISVILGGIAMGGAYAAWT QGMTKGNITVLAAASYFTPVLSCVFAVFWIGAKLDSSFWTGVAAVVVGSLLCWDATARGM KPLLALEAQGRTSAANRIWLHLTGRGSKR >gi|319805164|gb|ADMF01000015.1| GENE 61 73186 - 74811 1070 541 aa, chain - ## HITS:1 COG:PA5473 KEGG:ns NR:ns ## COG: PA5473 COG1283 # Protein_GI_number: 15600666 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Pseudomonas aeruginosa # 5 531 4 524 582 215 32.0 2e-55 MYTFLLHSASAVALLVWGAYMVKTGILRTFGEALRSWLATRLSNRFAGFAAGMGLAMLLQ SSTAASLLVASLQAGGLVSTAAALAAVLGADLGSALAARILTLNISSLIPILLIAGTFLF LRRMEKREGQFGRMLLGFAFVLLALQSIMASTQPMRDSPIILETLAHLPEHPFLAAAVGI ACAVLFFSSLAVVAVTAAATASGLLPASAALWVVLGANFGSALLAAAATAGASKAARKAP LGNFFFRVGGFAAGAAVLYFIPAAGSVFASLGDPADGVILFHVVYNTVIGAVGLSFIHPA AALIDRLVPVSVQTDDFETHLLSKENLLSSSSALVQVRHENARTAELFRKHWDALTPLIY ENPPMGELLAFKERRKLLDRRCRTVSKALNIIIRDDLSEEAVIEWQSLSAVSDALLFSLE VTNDIVDLLRKKKIRRSLFFSAQGAQELEQEHHVVSAHLQLLAQILSTSDPQEINELRNN LLSGEAASSSDAAELVSRHMERVDKGSALSIETSALHLDLLLLFRRVDSILAHGARSFAV S >gi|319805164|gb|ADMF01000015.1| GENE 62 74910 - 76043 895 377 aa, chain - ## HITS:1 COG:PH0078 KEGG:ns NR:ns ## COG: PH0078 COG3191 # Protein_GI_number: 14590032 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Pyrococcus horikoshii # 5 376 2 361 361 267 45.0 2e-71 MTNNRVRSYGIHIGILPAGKFNAVTDVPGVKVGQVTLEDDACGMHTGVTAILPHGGNVFQ EKVPAGVFVGNGFGKSAGIPQINELGTLETPIVLTNTLSVAAGIDGLLSWTLEQPGNEAV KSVNAFVGETNDGRVNDIRARFVSPDHVIEALRRAESGPVEEGCCGAGTGTVAFGFKAGI GTASRKLPESLGGWTVGVIVQANFGGFLTVKGVEVGRQLGGWSNEKLLTQTMPAGWAERV KDVAGSADGSIMMIAATDAPLTQRSLERLAERAFMGMTRTGGIASNGSGDFALAFSTAPS MRVRHEAPYGLLEGGPTVRSDDMTPLFMAAIESTEEAILNALFTAHDTAAYDGGRIAGLP REAVLQMLRKAGVLAER >gi|319805164|gb|ADMF01000015.1| GENE 63 76241 - 76753 400 170 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTNKISSASQTVRAFNVGTLGDCSAWDDNLDAATLEWLPAEEAPSFMSGTGSDEVCESGI GFAREREGCCMCSFGFDAVGVRNGDSELLESMRDRNVRHASSEIDVGKSSVGNDELDSHK QSFWVQNGIGRRFLSPDVFSDGLYTGGESFWSRLSGSSAEWLRKLGFYKK >gi|319805164|gb|ADMF01000015.1| GENE 64 77090 - 78298 924 402 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPDHNTHGVGFKRMRMAGLLPAAALILAVFAPSTVSAAEVKLAGAVVSGLFYSKAESAEH SNLVLAGVGETPDDTCFKILGREDLGNGYYVRFNLSSNVTPDTGSFSGHNGLFSSSYMSI GNQQFEVTAGRMSGLTVSGDPYSVYAATDANMTYAQLAGIAPANITFQAGALTNALAFTT HGSRFVLRGVYSNGDSNIGDSGDTEATEDWSDRRHVAQLGAMWLGDKLKTAVVYSFEMPG QLANADGSRDVRRKNTHALHLIGSWHFAGKQGPGIAGILYASRNEWRIGAVPDLSTFVGD GRIGSSQEGLDNVAVHVSAKYPVGRHLFTAAAGYLHSKWNGESTKSGYTEGSMVMGGVVY YYSLSKSTRCYAAASWADGRKLLDAAPRLNRVMGTVGLMKYF >gi|319805164|gb|ADMF01000015.1| GENE 65 78521 - 79705 1073 394 aa, chain + ## HITS:1 COG:no KEGG:BB4490 NR:ns ## KEGG: BB4490 # Name: not_defined # Def: outer membrane porin # Organism: B.bronchiseptica # Pathway: not_defined # 12 394 4 368 368 64 26.0 6e-09 MQYNHHRSHACTLLCTALALAFGCAAAHAADVKISGSVITGLYFNKVEGADNGSLKMGGM GELPDDPHLMLTAREDLGNGWYTGAQLQNRFYPDSGTFRSNGYLFDAQSRLFVGNDQIEF SFGRMAGLTVAGRPYSVYGKTNANMTFASLGGIAPANIMFQPGDLSNAIAFSTNAQSGLF VRGVYSNGDSVNGTDTETTDDWSDRRHIAQFSTGWTGDHLKTAVVYSFEMPGNVKNADGT RPEVLRKKNTHAVHLIASYDFGGPAVSGILYASQNEWRIGPVGDLSAIVGGNDVVSNSEE GLDNLAVFMSAKYPIGQHTISGSVGFLKSKWQGAETKWGHDEGTMTMAGLVYYYNFSKRT NFYGAASWSDGKKLLNGVDRFNQVLTAVGLMHRF >gi|319805164|gb|ADMF01000015.1| GENE 66 79780 - 80502 506 240 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKPRMPKELIPLLEPGILYFKCPWRFHPDPPLLEKLFVDAPVVELPAHIDHHAFGRESF VYWIDQGILATCAPRTRGPRMTALFVPRTILGGPKALLHKRPLELTIRTLSPVRLRRRDA LQFRRFLADHPGIELEYLRTLAWNHEAQLDGLLVNGLDPVPVRLARLFLSLLAIGGEESS AGLLPIEPTVDELALMVHATRAVVNRLLSDWIKRGLIERNDRKIIVRPNFRDSFERSLAL >gi|319805164|gb|ADMF01000015.1| GENE 67 80687 - 82267 2004 526 aa, chain - ## HITS:1 COG:lin0374 KEGG:ns NR:ns ## COG: lin0374 COG1053 # Protein_GI_number: 16799451 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Listeria innocua # 20 523 47 505 506 131 26.0 3e-30 MPKFNRRQFLGSTAAAAAFAAAPAIVQAAVVEKKVDLVIVGGGLAGLAAANAAVKKGVKP IVLEKEAFLGGAGLFPEGSLGVGTRYQKEHGIKTTVQQVLDAALQFHHYRCDPAVLRVLI EESRQTIDEIQDMGIEFRGIRTMYDKHESLMTWHLFVGGAAKVIELFVKSIRQGGGELRT QTSAQRLIMNNGKVTGVEARDAKGNTIILHAKKVIIATGGFAANKEMLAQNVTDSSALGM VEPIWLRGPVVDGRSGDGITMARLVGANVAGMHAVAGNAPYLPDVPPINQFSGPDELKQG RCALAQPWLWVNHEGKRFFNESRGAVFVDVYNAMTSAGGVLYTIFDQSMIDDLINKGAVL PFNAIVLAGVPLKALPKTLEMGYERGWAFKADTVKELAQQIGVPPENLESSMKRVNEFAK TGVDEEFSRKPEHLRAFNLNKGPYYALKGVRCFFLTLGGVTVTPQFEAKNPQGNVIPNLY VVGQDIGGLYDSSYDLRCEGSASSFAMTSGRVAAENAIKAIEAGRV >gi|319805164|gb|ADMF01000015.1| GENE 68 82729 - 83769 869 346 aa, chain + ## HITS:1 COG:YPO3927 KEGG:ns NR:ns ## COG: YPO3927 COG0002 # Protein_GI_number: 16124057 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Yersinia pestis # 11 346 6 334 334 367 58.0 1e-101 MTAARKIRAAVVGASGYAGSELTRFLLAHPAVELTHLYVSAASSDAGRAIAEIDGRLFGR TQLVLEPMTDPAAAAQGLDAVFLATEHIVSAALAPIFAAQGAVVFDLSGAYRLPNASDYP KFYGFEHKHPELLDRAVYALGEFVDRGKLRAARIVSLPGCYPTASQLALKPLIDAGLLAA DFKPVIDAVSGVSGAGRKAKIGNVFCEVSLSAYGVFTHRHRPEIEAHLGRPVIFTPHLGP FKRGILATVTVKLASGLGDQSQAREKIQQAYESAYAACPLVRLRPALPKLDDVVNLPFCD IGFSVDEEAGYAVVVSAIDNLIKGAAGQAVQVMNLRFGFPETQGLL >gi|319805164|gb|ADMF01000015.1| GENE 69 83788 - 84594 790 268 aa, chain + ## HITS:1 COG:VC2643 KEGG:ns NR:ns ## COG: VC2643 COG0548 # Protein_GI_number: 15642638 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Vibrio cholerae # 5 265 4 260 262 176 46.0 4e-44 MTNPFKADVLVVKLSGKALTADKALDALFAALAGSAASAERTRVVLVHGGGVEVDALMRG LGRRIDRIEGLRVSPAEDMPVIAGALAGTCSLKLRGAAQRAGLMPLGLCATDAGIGRVVP ADPRLGRVGVIEPGDSAAKRRLQALLDAGFTPVISSVGMDAAGALWNINADDAAVASAAL LGAPLIFLSDVPGVLDADKHLFEQLNEEQAETLIAEGVISGGMTVKVRAAFRAAAMTGKP VAAASVFDPMLPNKLAFGQLPGTTFTLE >gi|319805164|gb|ADMF01000015.1| GENE 70 85097 - 85855 712 252 aa, chain + ## HITS:1 COG:aq_1359 KEGG:ns NR:ns ## COG: aq_1359 COG1246 # Protein_GI_number: 15606556 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase and related acetyltransferases # Organism: Aquifex aeolicus # 105 247 15 157 181 108 42.0 7e-24 MNNASAQQKIFPLVPEHAASDMSAVLHMIPAEKAGALPPLGVKLPDDVAASFRGTPFADL YEEALNLLRSRNITADELRYLSRALTQLLAKRTTGEAAAVSPFYIRQARLSDVDALEGLV KYWAKQGENLPRKRADIIRNIDSFAICERDGRLVGCASLFVYDSGLAEIRSLGVAPDIQR QGQGRAIVEYLLERARRLDIDKVFVLTRNPKFFERVGFSLTKIDALPEKILKDCENCPKR ARCDELAYEYNF >gi|319805164|gb|ADMF01000015.1| GENE 71 85787 - 85921 78 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLQAQSLTDGSAVKLFALKASLEIVFVGKLVAPRALGTILAVL >gi|319805164|gb|ADMF01000015.1| GENE 72 85943 - 87676 1408 577 aa, chain + ## HITS:1 COG:VC2618 KEGG:ns NR:ns ## COG: VC2618 COG4992 # Protein_GI_number: 15642613 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Vibrio cholerae # 6 400 9 403 403 422 52.0 1e-118 MTQPTRAEYDQVMIPCYKPADLVMTHGKKCRLYDSQNRSYLDFGGGIAVNSLGNAPKIVR KALKAQSAKLCHISNVFTNDATLKLAKRLTSLTGFDRVFFTNSGAESNEAALKLARRTAF DDYGEQKDEIISFTHSFHGRTFFTVCVGGQDKYSSGFGPRPGAITHLPFNDIGAFEKQIS DRTCAVIFEPVQGEGGVLPVDPAFAKRVRELCDKHHALLILDEVQSGCARSGTFFAYEQI GIRPDIVTTAKGLAGGVPIGCVLTNDAVAKHFKPGTHGSTFGGNALACAVGNAVLKHISA PEFLEKVVKHGAFMKASLEALNKELHVFTEVRGMGLLIGCELIPQLRAQLGDIQKAALKA GLIILTAGGTTIRLCPPLIIKKREITEGVAILKSVLKGFLANLPKAEEPVKAVKTGSRKT RASAKEPAVKQVKSAAKAPQTRKAQPAKPAAAAPAKTVPAQAAKAEKPAARAATVSAKQP AAEQAKPAVKTPQVQSLKPAASRKPAPAQAVKTAAPAAVTPRVPAKKPAVEPVKSPAAPA AAGTAAAAVKAPQAEAAKEVKPSAPSAASAVPSKPVL >gi|319805164|gb|ADMF01000015.1| GENE 73 87981 - 88901 763 306 aa, chain + ## HITS:1 COG:STM2201 KEGG:ns NR:ns ## COG: STM2201 COG0583 # Protein_GI_number: 16765531 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 7 290 3 286 287 182 37.0 9e-46 MNRLLPITLRQLQVFLAIAKTESIGLAAESLTMSKSAVSQALSELETRLGVQLFDRNRGR IFLTAEGRRMMPQANEMLHRAEDIADLFRRGHEPCPFRVGCTRTIGTFMLADLLKSFRDA AGWMPATEIANTSRIAAKLSSFELDIALIEGPVTNNDLVTFPWMADEMVVVAPKDHPLTG RPVSYEELERASWLLREEGSSTRDFFETQLHQRLSRVNVSAELNSFDAILRSVRIGLGIT YMSKRVLTDPIFGRFLARVEIPDRWMRQLTFCHERGKYLSVDMLEWVEHCRNYARMLERR EADALR >gi|319805164|gb|ADMF01000015.1| GENE 74 89024 - 90499 2032 491 aa, chain - ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 1 491 1 491 491 637 61.0 0 MTQYLKDRYGLLINGEWVDAENGATFETHNPATGELLALCANASAKDVDRAVKAAAAAQP AWAAKSPAERANILLKIADRIDERALELATVETLDNGKPIRETTLVDVPLSSDHFRYFAG CIRADEGEATMIDENTLSIILREPIGVVGQIVPWNFPLLMGAWKIAPAIAAGNAVVIKSS STTPLSLNVLGEILNEFLPPGVVNIISGRGAQTGQAMLDHPGFAKLAFTGSTEVGYDVAE AAAKRLIPATLELGGKSANIYFDDCQQDKAIEGAQIGILFNQGQVCCAGSRIFVQEGIYD EFVAKLAEAFKKVKVGNPLCKDTQMGSQINERQLQKILGWVEEAKKEGAKVLAGGERAVV PGCEKGAFMQPTLLVDCENQMNVCQQEIFGPVACVIKFKDEAEVLKLANDSEYGLGGAVW TRDINRAFRVARGVQTGRMWINTYNELPAHSPFGGYKKSGIGRETHKVILEHYSQMKNLY ISLSEQKRGFF >gi|319805164|gb|ADMF01000015.1| GENE 75 90939 - 92018 1196 359 aa, chain - ## HITS:1 COG:Z4850 KEGG:ns NR:ns ## COG: Z4850 COG0500 # Protein_GI_number: 15803988 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 EDL933 # 9 358 10 350 352 246 38.0 6e-65 MSRSRSNFLAQLERAQFIAFSPFIFQAAAAALRTGLLETLSRSPGQNVAGAAAASGLTPY AAGVLIDILATAGILEPAPNEGLRGWKTTPVGDLLIYDEMTRANFFFTADTCWPGLDRTE EALKEGKPAGLAAFNPSWKTIYPHLPELPAMAQRSWFRFDHYHSDRAYAAAIEAIREFWA PQMPARMADIGGNTGRFTKMFLEAFPDSTAVLVDLPVEVNAIPERSELSSVQHRLSGHAI DWLTSEELTGMEDVDLFWMSQFLDCFSLDEAASILERTRRAMKPGAKLCVLEPLTDEQRH QAAALSLAASSLYFTVLANGVSRFFHGAELRELFKKTGFRIIQEKPNMGVSHTLFLLEA >gi|319805164|gb|ADMF01000015.1| GENE 76 92072 - 93109 872 345 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPNAHESTDPWPAPPQEDRSSPDPSSALQALQPLCFTQALFDNRSALEAVLAHLFTPSFE DFADFEDAELENDSDISAEPSVPAGWAATVMAIPDTLSPDLERALTALLPEETQHRLMRF THPARRLQSLFGRLLAQRLANLASHAGQSPYHLREQPPEGPQLTDFSGVSVGRFAVAHTD GCVAVSLSRRAMGIDLEQPTRAQQTKRLVSLAEFAFGARFARTIAAASAVNLTRAQEAFL AAWGIFESAQKMNGDDREPANDSPLTDEVLKKYARAREVELFWEDVLRTRAPDGSAVAQR FVRTPAGLLTLLGGGPADAPHALEWLDLTPEALLVELTAHRHAYV >gi|319805164|gb|ADMF01000015.1| GENE 77 93171 - 94445 1229 424 aa, chain - ## HITS:1 COG:ECs4341 KEGG:ns NR:ns ## COG: ECs4341 COG0304 # Protein_GI_number: 15833595 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 8 416 3 409 409 432 53.0 1e-121 MKLPQTARRVVITGMSAISPLGSSWADVRSALLHNRSGIQHMTEWEDLQGLNTRVGAPAA PFELDPEFFTRKRTRSMGRVAQMAVKTARDALRDANLLDSPEVSSPLCGVSFGSSAGQPR AVAELAHMILTKSCRGITATTYVRMMSHTAPVNISVAFGCKGRIITTSSACTSGSQGIGS AYEAIASGRQTLMIAGGCEELDATDAAIFDTLFATSTNWNDDPTHTPRPFDRRRDGLVVG EGSGALILEELEHARARGARIYAEILGYGTNADGEHITSPASEQMAAAMRLALDDAGLAP KDIDLINGHGTATDRGDLAESKATYDVFGGTVPYTTYKGHMGHTLGACGALEAIFAVHAM MEGFVSPILNLEEPDPECAPLDFVMGGVRELEQKIIMSNNFAFGGINTSLIFRKWPTDDS AASH >gi|319805164|gb|ADMF01000015.1| GENE 78 94442 - 95188 206 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 9 244 3 238 242 84 27 4e-15 MSPTAQSDRRTVLITGSTRGIGRAAALRLARDGYDVVVHGRKPSAEADALLAELREFNTA PRALFFDVADRAAAAAALSADIEAHGIYWGVVLNAGINRDGPLAGMPAQDWDQVLAVDLG GFYNVLQPLTLPMARKRRGRIVVMSSVSGISGTRGQTNYSAAKAGVIGAAKALAAELASR SITVNVIAPGLIDTAMASAEDRERILPYIPMRRLGSPDEVAAVAAFLLSDDAAYVTRAVI PVSGGLIG >gi|319805164|gb|ADMF01000015.1| GENE 79 95231 - 95734 306 167 aa, chain - ## HITS:1 COG:no KEGG:ACIAD0581 NR:ns ## KEGG: ACIAD0581 # Name: not_defined # Def: putative 3-hydroxylacyl-(acyl carrier protein) dehydratase # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 13 129 7 121 147 84 40.0 1e-15 MISTNELSFPMPAANLIAQRDPMRFVDTALYADDCAAESVTLVRADSLAADACGRFPAVA LIEIMAQTIGIYAGRLQRLAGEPPVVGLLLGTRRMSLPISFFTPGDKLFCRVQKKFESDE GLWQFDCEVMLIERASGVPCRVPAGSAALNVFNPPAGYFERLEDSTR >gi|319805164|gb|ADMF01000015.1| GENE 80 95731 - 97062 594 443 aa, chain - ## HITS:1 COG:RSp0361 KEGG:ns NR:ns ## COG: RSp0361 COG0304 # Protein_GI_number: 17548582 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Ralstonia solanacearum # 124 435 100 392 395 144 37.0 3e-34 MPFSACTQRTSFPDQLSNIAGAKKPLRPAVVIRRARLLSALGSSCEDTLRQLASAEDLCA QLAPSDVRVPESDLAEADRRIAEAARTTGLKAFTRPARSLRLAASAALPLLDEALQAGIA PADIGLIVGNTAAGTAETVSVLRSHPETEAPDKWMPIEIGAVAALTARLAGISGPAYCVS TACTAGSKAILEGARLLLTGRVRAVVAGGIDAESPLTEAGFSALGARSPGRALPFDARRT GMHLGEGGGFLLMMLAQTEQAYFGGMPDEGPEVRLAGWGETSDAHHICAPHPEGAGARAA IEAAIRNGAPHPVGFALLHGTATAQNDAMEARAMMSAAPGVSAASLKRHVGHQLAGAGAF NAAVAWSLLKGLGPTPLNFSRSSHPDPELPAAFRAALSGPENTSSDLTAKLDSPGAPGVL ASAFAFGGSNAVLFFTARQELDQ >gi|319805164|gb|ADMF01000015.1| GENE 81 97186 - 97860 448 224 aa, chain + ## HITS:1 COG:MA4322 KEGG:ns NR:ns ## COG: MA4322 COG0350 # Protein_GI_number: 20093111 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Methanosarcina acetivorans str.C2A # 77 172 44 134 156 71 38.0 1e-12 MPLILSLKKAAAAGISLRFIHVPLGEGLPLALRCWMLTADADGILGLSSVYSQGCMADEA AGTLLASQPKPASAAGEAYLAAAADRLHAWWAGDGSALNDADKLFSKQLPGTDFEKSVWA AARRVQPGSCASYGDIAGVIGVPRGAQAVGNALRRNPVLLMTPCHRVLPASALEAAKRAK RLGGAPYETVGGFSGAMTGPLTDLKRHMLMWEAERFGSAEPALF >gi|319805164|gb|ADMF01000015.1| GENE 82 97881 - 98690 591 269 aa, chain - ## HITS:1 COG:BH3997 KEGG:ns NR:ns ## COG: BH3997 COG1694 # Protein_GI_number: 15616559 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Bacillus halodurans # 34 118 14 98 101 80 47.0 2e-15 MSLPPHSAAESTAFHPKLPPPAISAETAARLLAFRDARRWAPKHNPKDLAASIVIEAAEL LEVFQWSGDDLECRDKHEQMEDELADVFAYALLLADRIGASPDQMLLKKLEKLEKKYPAE VCRRDPLFETYETLKTAERTRREMLEDPQLQRVLGFLRFLHEHSVGAWTSASDGRVFFVA YDRAAVNFWQAVEDWTSHFPAKMLENALPENFAARPSAEDIAELSFAGAAALLKKIVREE RIHDGAFLSAAESGVLKCILERLQSLAEP >gi|319805164|gb|ADMF01000015.1| GENE 83 98825 - 99574 675 249 aa, chain + ## HITS:1 COG:VC0470 KEGG:ns NR:ns ## COG: VC0470 COG2356 # Protein_GI_number: 15640497 # Func_class: L Replication, recombination and repair # Function: Endonuclease I # Organism: Vibrio cholerae # 41 244 34 229 231 166 43.0 4e-41 MSNRLLCLLLSASLFAAGAVQAAGNTTIESFNKAKKILEHQVYQDHRITFYCLASFDRDK NITLPEGFVTPEHQKRAKRVEWEHVVPAENFGRFFSEWRDGSPECVDSKGRSFKGRKCAE KASKEYRFMQADLYNLYPAIGAVNAIRSNFNYQMLPDTAATFGTCPMKVANRRAEPPEYT RGPIARSTLYMAEAYADVYKLSNQQRQLMEAWNKMYPADQWECTRAQRIQKIQKNENRFV TEACRKAGL >gi|319805164|gb|ADMF01000015.1| GENE 84 99849 - 100268 566 139 aa, chain + ## HITS:1 COG:no KEGG:RB4711 NR:ns ## KEGG: RB4711 # Name: not_defined # Def: hypothetical protein # Organism: R.baltica # Pathway: not_defined # 2 128 11 137 149 95 44.0 4e-19 MKKIFTSSPLSLDFGLLLLRVLLAAGLLTHGIAKIANFSALSTSFLDPLGIGVLPALLGA IFAEVVCSILVLIGLWTRLTVLPLIFTFIVVFFVVGGGAAFAQRELAYLYLAGWVVLFFT GAGRFSVDALRCPLKKAAA >gi|319805164|gb|ADMF01000015.1| GENE 85 100529 - 101953 1038 474 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQRIYGFICAHSRTAALAVVVILGAEAAFIGWQKAQYDEFMGSLLTPGALAEGVLAVGDR MDDGIFSRRDRVHFTIASSLYSDNPSAPPLTLDFDVTANFGPFGLTGDIFVLNATTGSAK LLKMLEGTHPRLSIRWSRSVFDAALKIAASAAPFDMRLNFVKPGVGPISWRLAAPKPVEC SLKLPKQGSLSTVCTAPALLVSLTDPAANISEVRLTRASFDGIALKTDPTMALPAADAKD ETLPADAADDSQSSERALWYVEKAELKADELDFSSGDWRGIFKVLMRKFSAQAHQDPTPA EALDGSYSAFAQKATLKVTNHKGDLERHLNAEDFRMKMKAADVPFKLFGAVDDESIEETL DAAGPMHFELTEFGFRSGPKGAQKTSASGVLEARRSGGKLPETELTLSAQLPEPVLEIVD TIVRGARPDARGQSVKRFMTPKDLPEGRVWELKMKESRRGSLTARSFTVDNVEP >gi|319805164|gb|ADMF01000015.1| GENE 86 102382 - 103710 1302 442 aa, chain + ## HITS:1 COG:HI0584 KEGG:ns NR:ns ## COG: HI0584 COG1473 # Protein_GI_number: 16272528 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Haemophilus influenzae # 20 438 3 422 423 341 41.0 2e-93 MRTAAAPDRPHLLPGWQDPVDPAALMALRREIHRTAEIGWAEFISTARLAQAFETEGFKI TYGPDFISPQFVRGRDAAEVEKGRLFAMQNGVPAGLMRRMGDYPGLIAEWDTGRPGRTLA IRVELDGIAVEEPESLAHLPYRDGFSSIRRGVMHACGHDGHQAAAIGLAKFIHANAERLC GRIRFICQPAEEGSRGAYPILQAGVLDDVDMIICGHISPELELGTVVAAPRRLLSTTKID FEFTGRASHAGSHPQTGRNALLAGAAASLAIMALPRHADGMTRVNVGQLHAGEGRNIVPS HAWMEVEVRGETGEINRDLTAEALTRAQGAAMSFGVECRKRIVGEAIDYQPEASTTQLLT VCARRARGCSKVLPTWNCDYSDDGTLLIRRVQEQGGKGGYFLVGGALSSSALKPAVDFDE AAVITLYDTWANLITAVLGNWR >gi|319805164|gb|ADMF01000015.1| GENE 87 103817 - 104629 1184 270 aa, chain - ## HITS:1 COG:AGl761 KEGG:ns NR:ns ## COG: AGl761 COG1464 # Protein_GI_number: 15890496 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 25 270 14 259 259 233 48.0 3e-61 MKRRDIALAAALLPFASIFAGSTAFAADAGNLKKLRVGVTAGPAAEILEQVVPLAKAKGL DIQIFEFQDYIQPNAALDSGDLDANIFQTIPFMEQTIKDRGYHLSVAGKGFTLPMAFYSK KVKSFAEAPKGATVGIPNDPAMGGRALFLLEKGGVIKLRKGVGYTPSVLDIVENPKDLKF VELEAAQLPHSLNDLTISAVNGNYAYVANLNPTRDGILVEDADGPYVCNIVVNTKDLGKP WVKQLVEAYQQPQIAAWIKEKYKGIVIPGF >gi|319805164|gb|ADMF01000015.1| GENE 88 105073 - 105879 1339 268 aa, chain + ## HITS:1 COG:RSc1744 KEGG:ns NR:ns ## COG: RSc1744 COG0760 # Protein_GI_number: 17546463 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Ralstonia solanacearum # 58 265 42 255 255 110 31.0 3e-24 MMKTTIAAALALVVASGAAMAEFKDFTVNGDLVTKGQQEAVATEAISNNPNPHAAIANPQ IEDQVRQMVIEYKVMSQYAKKEGLDKQQAVKDDIERMTDMVLMKHAVNEYVKKNPVTEKE LKDEYQKESDRWGKTEYRVRHILVKTQDEAKQIIDQINKGASFAKIAAEKSLDEESKDRG GILDWTSASVFTGQLSSAIMGLKKGEMDKVPVQSPAGFHVVKVEDVRPAELYPKYEARKE ELRHILLQRKVQAFIHEQVLRAEVKDAK >gi|319805164|gb|ADMF01000015.1| GENE 89 106113 - 108755 3069 880 aa, chain + ## HITS:1 COG:VC2052 KEGG:ns NR:ns ## COG: VC2052 COG1138 # Protein_GI_number: 15642052 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Vibrio cholerae # 1 642 1 642 651 542 48.0 1e-154 MTAEIGQYALILALMVSAVGGVLTLAGAELASRSWMRVGMAAAAVLAVLATIAIGALAWG FVESDFSILNVARNSNIALPWYYKLAAVWGSHEGSILFWVTTLAWWIFAVALSARHLPER VLARILGTLFIITFGLYLFILTTSNPFLRLFPPAEAGADLNPLLQDPGMIFHPPLLYLGY VGFAVPFAFAVAALLGGRLDVAWARWMRPWTTASWVLLTLGISLGSYWSYYELGWGGWWA WDPVENASLMPWLTGTALMHSLAVTEKRGAFKIWTVFLAILTFSLSLLGTFLVRSGVLTS VHAFASDPARGMFILIFLVIVIGVSFLLFAWRAGSVASAASFSGLSRESLLMGNNLLLVA GMAIVLLGTLYPLFLDAVGGGRITVGGPYFESVFGSAMVPLAFLVPVGAVCAWKSQSIDR MGRLLGLPLALALVLGLLTPVLLGAWSTVMALAAFLAYWIVFGAAADWVRYARTARAQKR SVFGQTLPWWGMHIAHLGLALLIFGAAANGIYQVERGAAMQPGQTVQVRDVTLRYDGWSE YRGPNYTAAKGVLTIVNDQGKEFEQLFPEKRNYDAVQNMTMTEAAILHRLTEDIYVSLAS PTPDGEGWVVRAYVKPFVTLIWIGTLFMALGGLLAMATRSTRAPQLREMGKRAAISAAGT AAACCVLAMLAAPASSYAAEPLMGSVTATEKSKAAAAFLDSAPSLGTVENSADAFANLKT AEAKPSEFDPAANPRVHNIASQLRCLVCANETIAESNAQLAVDLRREVAEQVKAGRTDDE VVAFMVERYGDYVLFKPPFKAKTWLLWLGPIAFVFLAFWGMVRIVRIRREDAKARRLAAS AKSLACAKAFLRGEVEYVDGGFAARQSSLKNGVQTRGASE >gi|319805164|gb|ADMF01000015.1| GENE 90 108752 - 109771 1140 339 aa, chain + ## HITS:1 COG:PA1483 KEGG:ns NR:ns ## COG: PA1483 COG4235 # Protein_GI_number: 15596680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cytochrome c biogenesis factor # Organism: Pseudomonas aeruginosa # 33 287 29 266 407 70 29.0 5e-12 MKYEVIFCIFALVLTAGVVGAFAWALLGHSKGGRAEEARTADNLAGLREEYAHLVEQQAA GRLTQAAFAEREEELALRVLEETEETKDSADPSQVRKDADNARTSLITTAAVAVMIPATA VGAYLWYGDFSALDERAVEQVRLAAQAAKSERDMQGTMASLEKAVQSNKDNLEAWELLAE QYNATGNLSQAAIAFENVVRLAPKNANAWAELADLTIALNPSDLLKAGEMAEKALAVDPW HQKGLMIGAAAAFERGDYAHAAVLFDRLRKQIPAGNEVHDALTQQIEMTLAAGGLKAIPK DDVGEKPETDLEKMMKLGGGMQQAPERGQDGVGLNPLKR >gi|319805164|gb|ADMF01000015.1| GENE 91 110387 - 111571 1351 394 aa, chain + ## HITS:1 COG:RSc1519 KEGG:ns NR:ns ## COG: RSc1519 COG0505 # Protein_GI_number: 17546238 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Ralstonia solanacearum # 9 392 6 377 378 452 59.0 1e-127 MALIAKTRPQAALVLADGTVFQGESTGAAGLTVGEVVFNTSMTGYQEILTDPSYTGQLVT LTCAHIGNVGVNPEDMESNAIHAAGLIVKAAADVPSNWRARQSLPEALKDAGVKAICGID TRALTIHLRTTGAQAGAIIAKQMGDELTDEDLQQALEAARSWGSMAGQDLAKTVTTDHVY DWTDGSWEPSREGEPAGFRRAAVFPYHVVAYDFGIKTNILRLLADRGIRVTVVPAQTPFE EAMKHQPDGIFLSNGPGDPAPCTYAIEVAQKAIAAKLPLFGICLGHQIMGLAVGAKTLKM KFGHHGANHPVENVETKRVYITSQNHGFAVDADTLPANARATHRSLFDGSLQGFELIGQP AFCFQGHPEASPGPHDIDVLFEKFAKSLAGRRAG >gi|319805164|gb|ADMF01000015.1| GENE 92 111623 - 114868 3851 1081 aa, chain + ## HITS:1 COG:RSc1521 KEGG:ns NR:ns ## COG: RSc1521 COG0458 # Protein_GI_number: 17546240 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Ralstonia solanacearum # 1 1079 1 1081 1081 1490 69.0 0 MAKRTDIQSILIIGAGPIIIGQACEFDYSGVQACRVLREEGYRVILVNSNPATIMTDPKT ADATYIEPITWETVARIIEKERPDAILPTMGGQTALNCAMDLVHHGVLRRWGVELIGATP EAIDKAEDRERFKKLMTEIGLESARSGAAHTLEEAFAIQKTVGFPAVIRPSFTLGGTGGG IAYNMDEFLEIVSRGLELSPTSEVLIEESLLGWKEYEMEVVRDKADNCIIVCSIENLDPM GVHTGDSITVAPAQTLTDKEYQAMRDASMAVLRAIGVDTGGSNVQFAVNPQNGRMIVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNEMTGGKTPASFEPAIDYVVTKVP RFAFEKFPAADDRLTTQMKSVGEVMAIGRTFEESLQKALRGLETGKCGLDPITTDRSKIL CEIAEPGPERIFYVADGFRIGMTVEEIFELSKIDPWFLRQIDELVKVEASIAGHNLNELD VDDFWALKSRGFSDKRIAKLLADCHENEVREARRVLGVEPVYKRVDTCAAEFATTTAYLY STYERSRISEADPTDKKKVIVLGGGPNRIGQGIEFDYCCVHASMALHEDGWESIMVNCNP ETVSTDYDTSDRLYFEPVTLEDVLAICEIEKPQGVIVQYGGQTPLKICRALEAHGVPIIG TTPDAIDCAEDRERFQKLINQLGLLQPPNRIAHTEDEALAKAEEIGYPIVVRPSYVLGGR AMEIVHTPERLVKYMREAVKVSPEEPVLLDRFLDDAVEMDVDAVCDGDVVAVAGVMEHIE QAGVHSGDSACSLPPYSLAPSLVAEIRRETRELAKALKVVGLMNVQFAVKNAHTEEPVVY VLEVNPRASRTVPFVSKATGHQLAKIAVRCMVGDKIADQGLTVEELEKAPKYFSVKEAVF PFAKFMGVDPVLGPEMRSTGEVMGIGSDFGEALRKSQLAAASKLPSSGLCFLSVRDSDKP KVTIAAHELHHAGFKLIATAGTARVIQAAGIPCRSVSRVHEGRPNVIDLIKNKEINLVVM SVAEHEHELDDARAIRQVCLAEQTTYYTTMAGGLAAAEGIRRSELSEKVRDLQHLQAGVV D >gi|319805164|gb|ADMF01000015.1| GENE 93 115135 - 118218 1921 1027 aa, chain + ## HITS:1 COG:MA1603_2 KEGG:ns NR:ns ## COG: MA1603_2 COG1061 # Protein_GI_number: 20090461 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Methanosarcina acetivorans str.C2A # 211 760 1 522 618 459 44.0 1e-128 MNFEAFLSAADRDKDGLCFENSSENLQKSLATSFADAAIPSEAGLRTTLLANDPIRHLKI LTAIDDELSHARSFSISVAFITKSGIAPLLLTLQRLAAEGVRGRILTTDYLYFTEPGALR QLLTLPNLEVRIFRTQGAAGFHTKGYIFHSSNNLLRIIIGSSNLTLTALTTNREWNTRIV ACERGELAQSILAEFDSLWSDAASRDAALEMEAYEREYRQLGAAQLEARKAAVNAQPTIK PGCVEPNSMQQAFLARLKALRSNGAERALLISATGTGKTFAAAFAVRDAIAQFQRTPSAH APRDREGRHSQRFRMLFIVHREQIARQALKSFRIVLGDAAGSFGLLSGNEKASECDFVFA TMQTLAKTAVLQTFPKDAFAFIIIDEVHRAGAPSYQRIMNWFRPAFWLGMTGSPERTDGF DIFKLFDHVIAHEIRLSEALEENLLTPFHYFGLSAGTEDETGEEAGQLPDFTNPNWPERI QHVIDQAEYFGSCGDRVKGLIFAGSLEEARAAAAAFTSAGHPAIALDGQTAQDEREAAIE RLTHGMGPNRLEYIATVDIFNEGVDIPEVNQILMLRRTESAIVFVQQLGRGLRRAADKEY VIVLDFIGNYEKNYLIATALSDDRSYSKEKLRRFVTTGAERIPGASSIHFDEVARSRIYR AIDSASLNSVRLLLDAYKLLKYKLGRIPELADFEKHGSIDASKFLLRKRSSYYDFLVQYE PDYSERLSDAAVKRLRWCSNRLGSALRPSEALVLQAALEGRSDLRAALIEKLSAEPYNFK ASPAHLRNVECVMTAKFERTLNDIKRNAGCEVIEAFDDVEDGKRVRRWRADPQFFCCLAD EPSFRRHLESLTHFVLNRCRACESHRWEDTFLLLGSTYTYEDVCRLLDWDRNITSINIGG YFYDEKTQTFPIFINYEKQAGAIAYADRFISPAELISLSKVNRQIDSQDAQRMTQKGQYA AIRILLFVRRSKDDDEAKAFYFLGAMHAAAAPQPVRLANGQSAFEMHWRLETPVEEGLYE YLTGRRG >gi|319805164|gb|ADMF01000015.1| GENE 94 118343 - 119839 1827 498 aa, chain - ## HITS:1 COG:MJ0791 KEGG:ns NR:ns ## COG: MJ0791 COG0165 # Protein_GI_number: 15668974 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Methanococcus jannaschii # 36 488 40 473 484 145 24.0 2e-34 MKKWILGAAAAALLPIFAQADQPRDEFFWLSEINKASCIINTEEGLLEKTMGERIAKGIS AVITNGNKENGPRPTQVIKYEPYLIKEVGMDATMLHIGRSSQDMHATYRTAIIRDNTLKL SETLTNAMEVLNTLAKNNQATIVPNYTNGVAAQPNSYAHYLMGYQAAFSRDLEKIRNFYQ RLNYCAMGTTVLNGTSWPLDRQRMADYLGFAGPVPNAYDAGQMKSVDEPVELAAIATSIA LHVGTFIQDVSVQYAQPRPWILLQEGGDNTYVSSAMPQKRNPGLMINTRAAASDVIGQAQ TVILKAHNIPPGMSDPKSVSANAKLANDTSALLKQFTRVIKALRVNPERALEELNSDWTA SQEVADVLMREYKLPFRVGHHVASHIVTYARNNNLSPTNFPYEQVKKIYAEVIKSEYPQG NPVCPMSEQEFRDTLNPTAIVANRKTEGGPQPAELTKALSAADAAIAEQREWTKQNRRHI DQSLAKLDADFQKLVEQK >gi|319805164|gb|ADMF01000015.1| GENE 95 120271 - 121035 789 254 aa, chain - ## HITS:1 COG:no KEGG:Bcep18194_B0247 NR:ns ## KEGG: Bcep18194_B0247 # Name: not_defined # Def: hypothetical protein # Organism: Burkholderia_383 # Pathway: not_defined # 4 246 4 246 258 115 38.0 1e-24 MIIFLIKLIAAPLLLALATLAARRWGTVLGGILIGLPLISGPISVFLAIENGAGFAVETA RGALAGTVALAVFTCVYAAVCPKGWLKASFLSVALYVLASWIAAELPISAVTLAVSAAAA IVLSLWIMPVPHSAAVKHRPPKHDLLMRMGMMMVLMIAITFLAPYIGPTASGIASTFPYM ALTMAVFSQIQGGPDDARRAMHGLMLGMYSGLAFNAVVWTLAAEDRLLIAYAAATAAALA AQGVVLALTLKKTA >gi|319805164|gb|ADMF01000015.1| GENE 96 121232 - 122044 441 270 aa, chain + ## HITS:1 COG:no KEGG:FN1780 NR:ns ## KEGG: FN1780 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 16 248 4 240 247 154 33.0 4e-36 MCDSISNGAARSSPRSIFLSFILLKDAAWCASAFVKRFRREWDDSIELEDGASSSTSCFI VDDVPVFIRLIPAPIPDNEALGAAEDNFLWRGDKSLVAHHRAHLIVTAPLPGKRAGRAFA KVCASLAGEASSVGIYINGVVHQPETYRDFAQCMKDGAFPTLCLVWVSVVRLESGSFAAW TEGLEALGRMEMEVPAADIDPMELFFFLADTADYVSENEVDFQDGETVSYTAGQKLPLER SPGIFLKGRDTWKIRFQPNELLAHEDEAHA >gi|319805164|gb|ADMF01000015.1| GENE 97 122079 - 124652 1292 857 aa, chain + ## HITS:1 COG:FN1267 KEGG:ns NR:ns ## COG: FN1267 COG0457 # Protein_GI_number: 19704602 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 37 194 21 181 205 86 34.0 2e-16 MTPRGIIFSDEDRAKLAAFDSGNEIRPGRILAEIDAIIDRGIMEGRFTREAADQDLECAL MRAHACLNLHQYEDCIRALSILRRAEASAAGCGIFFYRLCAVWLHLGKIEEAHQCAERAL REEPTYPWGWLEAAKLRAHFGDAEGALKAIETGLALVPGDPEFLTARREIESGSDILQLS NHLIDPDADEALQRNQMPSDELLVYTRFNNCILAKPDGLEAVFALFNFSDWQPADPPEVP FCTGTSSAAGFPLVFRFLMNVPALSHVSVGWLGDLIRAVPQLLKDHDISASDVVCINVRQ NEEIGLLIRVEDGTPDEAGEVCFRIRQTAVHMGDSAPADEETEDYTAEEEELIPKIRIWN QENEYQTIINAVEALPAAKRTLRLTSELARAYNNLAQPGEDALFLHALELLESCRAEQEN THEWNFRTAYALFYLDREGESIPYWERALEYRPGDEDTIKMLDAARRAVTIPIFRRCFNE RAAQFWDAFSEADAELRALIASGNPADALERIVKMLKSISEGWGIGFSSPTDAAGHFLLE LSPQHDYVQILPILKLLDAAPIALGAHWEFAAGLRPKPAAVELKFNKGLLFDCREIRCRL VKEENAWVLQFFAESLRGLDEEESAPVFEQLTLLIDHLIGEAASMRFIRNLTILRKPPED GGFLLSELPERIAALEPRAKNYTHREIAEERLDYWLKPEKEAELNFDIRFGWTAAPYFIN SYRSGESEVVDVLHRQGIAVGFFFFERAAAVSPEAAEALDRTIIADFRGMLSETVPGAAS VVGEAFSEKRCYVEVMLWDSDRVFEAVQNWSSQASNVRAAAFRSYRRPAGILFFKSADRS KNASDAGDAADEADEVS >gi|319805164|gb|ADMF01000015.1| GENE 98 124774 - 125034 314 86 aa, chain + ## HITS:1 COG:no KEGG:Ccur_12930 NR:ns ## KEGG: Ccur_12930 # Name: not_defined # Def: copper chaperone # Organism: C.curtum # Pathway: not_defined # 1 82 1 80 82 68 45.0 8e-11 MYKTIVGIEGMACGMCEEHICSTIKKAFEVNKVKASRSKKCAEIITELPLDEKAVRDAIA PTGYEVTSFACVEEAPKKGFFAKLFG >gi|319805164|gb|ADMF01000015.1| GENE 99 125278 - 125949 1031 223 aa, chain + ## HITS:1 COG:STM4514 KEGG:ns NR:ns ## COG: STM4514 COG3314 # Protein_GI_number: 16767758 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 15 218 84 286 294 179 45.0 5e-45 MTENNQAAASEDDQDVGHVGVGAYVALIITILFFSGLFYNIDGYKWLGSFDFTTLAGGFG KIDGLTYIGKGGFGARQGFLFALSLFPSVMLALGVMEVVTYYGAMRAAQKLMTPLLNPIL GVPGSTGLALITDLQSTDAGAALTKGMYDRGLFNKKGLIVVCAWQYSGAGLIGNYFASGS ALFAATLCPLIVPLILMIVLKFVGGFLVRCVLNTVYRKDFEND >gi|319805164|gb|ADMF01000015.1| GENE 100 125942 - 126418 477 158 aa, chain + ## HITS:1 COG:ECs5287 KEGG:ns NR:ns ## COG: ECs5287 COG0700 # Protein_GI_number: 15834541 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 9 154 8 153 153 127 47.0 1e-29 MTEKTTSTNPLDIFIVGVRKGINIALLNLTPNVLMAFVFAHMLTLLGVMDFLGQHCGPFM ALFGLPGQAITVLLAAWLSASAGAGMAASLLAQGVLDADGVTVILPAIFLMASQIQYMGR LLGVADCPKRYWPLLMLNSIVNALLSMWIMRLLMPFFS >gi|319805164|gb|ADMF01000015.1| GENE 101 126728 - 127516 593 262 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTKRALLKSLTRAVRVVTGAAARAVARMEKKAAVYFSKSWLEKMEPWLWRFSRPTLEKL LQHEEKRISDASRATAAERRRTEALRLAAKHFGDRDWQWRYWCLRLRRTGALQDGGPTSF FELWRTLPPERLARAEDEAEARRRAEASFITHLQAIAHGRTGLSVSALRQPMPSDPARAA DDEAVLRMLWLWVGYVAYDETLSESGEEAVKRFLKRAWPKYHGSRITRSLLETWVQYAKD IKYERDAQACYGGRGWDPRRRR >gi|319805164|gb|ADMF01000015.1| GENE 102 127776 - 128246 431 156 aa, chain + ## HITS:1 COG:all4694 KEGG:ns NR:ns ## COG: all4694 COG2954 # Protein_GI_number: 17232186 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 1 154 1 153 153 189 60.0 2e-48 MSKEIERKFLVNGNAWRTLAQGVLYRQGYLNSAKERTVRVRTAGEKGFLTVKGITNGVTR SEFEYEIPFADADKMLSGLAEKPLIEKRRFKIPAGSLVWEIDEFLGENAGLIVAEIELPD EDAPFERPDWLGREVSNDPRYFNSNLVRHPFSQWQV >gi|319805164|gb|ADMF01000015.1| GENE 103 128255 - 129187 725 310 aa, chain - ## HITS:1 COG:CAC3361 KEGG:ns NR:ns ## COG: CAC3361 COG0583 # Protein_GI_number: 15896604 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 8 309 8 298 312 149 30.0 8e-36 MPSNICRYLTALIAEGSFSKAAQRLGISQPSLSQFLVRLETDAQTELVDRSAKPLKLTAA GALFLRTEQQVDLLRETAAKQMLDIKGGVRGHVTVGASDYRETFFLAEVLPVFHRLYPLI EVSLTEGRTKELEQMALEGAVDFSLVITPLFHPGTLTTIELYQERILIALSEKHRLAQQH PASPSEEFPVIDFHDLDREPFIKIKKGQQMDVLFRELCRMSGASPRVVLESESMIAAATL ASAGLGAALTTETLVRRAGTAKPLRAFSVEPPVPPRIVAAAYRSERYLSKAARALIRVMT NVAASRFQNG >gi|319805164|gb|ADMF01000015.1| GENE 104 129174 - 129389 78 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLGIEELREDGAGCRNTAQKTYGLRIAKGSERRIPMALGERPGVRRRIMPRERFKAGGE DVRRQLEADYF >gi|319805164|gb|ADMF01000015.1| GENE 105 129380 - 129997 240 205 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 10 195 321 504 508 97 30 2e-37 MKTHILNTPIRDEDLEKIEIGDIVYLNGALITARDQAHHRLVKLGRKLPVDLNHKAILHA GPIMVPAEDVKSGWKVASIGPTTSMRMELFEKEFIEETGVKLIIGKGGMGPNTEAGCREK KAIHCVFPGGCAVVAAACVEEVEDHQWPELGMPESMWVMRVKKFGPLICSIDTQGRNLFK ENKKVFEERKAPIVERICALVDYQK >gi|319805164|gb|ADMF01000015.1| GENE 106 129994 - 130893 736 299 aa, chain - ## HITS:1 COG:STM3355 KEGG:ns NR:ns ## COG: STM3355 COG1951 # Protein_GI_number: 16766650 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain # Organism: Salmonella typhimurium LT2 # 1 297 1 297 299 363 55.0 1e-100 MQKEELKDQFTDLLSKFTTYFGKYLPDDVMESLKTLSSKQQSEISKIIYDVMFDDMDLAK KRNVPICQDTGVIQYFVKCGANFPLLGDLESCLREATKRATKDAPLRHNAVEIFDERNSG DNTGVRIPWIDWQIEPDSDSVEIYAYMAGGGCSLPGAAKVLMPLEGYEGVVKFVFDILCD RGVNACPPLLVGVGIAGSIDVASTLSKRALMRPVGSHNSNPVGAEFEKLLSDGLNEINIG PGGFTGTDSVMGVNVEQAARHPSCIAVAVSVGCWAHRRALIRIHPDMSYEFLSHKGVVL >gi|319805164|gb|ADMF01000015.1| GENE 107 131226 - 133457 2423 743 aa, chain - ## HITS:1 COG:no KEGG:Coch_1325 NR:ns ## KEGG: Coch_1325 # Name: not_defined # Def: conserved hypothetical protein, membrane # Organism: C.ochracea # Pathway: not_defined # 1 706 8 724 763 497 40.0 1e-139 MLAFLAVIAVIDLFVGVSNDASNFLNSALGCRIASFRTTMWVASLGVLLGATFSSGMMEV ARSGIFHPQMFSFSEIMVVFFAVMVADVILLDAFNSLGLPTSTTVSIVFELLGSAAAAAA WKLLDAGQSLGDLYTYINTSKSLGIVSGILISVVVAFISGAVIQYLARLLFSFRFEGMYK RIGAVYGAFSITAIIYFLVMKGAKGASFMRAEWLDWINANTSPILLTLFVGFTILFQICI AFFRINVFKIIILAGTFSLAFAFAGNDLVNFVGVPIAAWDSFKIWSATQSSAEAFMMGDL LKPAAASTWMLLASGLVMVFTLWFSKKAHRVIQTSINLASTQTGEQEQFGASLPGRMIVR AAVGMGTVINQIMPGVLQRGIASRFVPAPQEKGTIPLPFDYVRASINLVLSAILIASATS LQLPLSTTYVTFMVAMGSSFADGAWDRETAVYRISGVLTVISGWFITALCASSLAAVAAT IVFWGGETAAVILGLAAIAILVRSNLKKHEEESLAKQSAQRFTAPAIRTIIDSKSPANLC RTLDLLDEVVDGLLADRELALRSAKSDASEFFDQLSKDRSVYYRMAMMDKTPSKVDFNAR YCYFRAFTNMREVGRSLQSLAKQSLEHVANRHRVFKGDLADELRALTAELRRISSSVDGK PDLEELHLNAKAAIDRIDAMQSELMRAIPDGELSIRGSELYLTFLLFARDFINHYEIVSM LAARIDSLEQTPSGVTAPKEKIS >gi|319805164|gb|ADMF01000015.1| GENE 108 133494 - 133958 333 154 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 147 420 564 570 112 38.0 6e-24 KDFGIFVILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICR HVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCV ERVEVRNRVAQYRWSTETTARDQMFLELFFDESD Prediction of potential genes in microbial genomes Time: Sun May 29 19:34:02 2011 Seq name: gi|319805159|gb|ADMF01000016.1| Sutterella wadsworthensis 3_1_45B cont1.16, whole genome shotgun sequence Length of sequence - 2765 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 357 215 ## - Prom 377 - 436 6.7 + Prom 333 - 392 2.8 2 2 Tu 1 . + CDS 500 - 697 189 ## VIBHAR_02798 hypothetical protein + Term 713 - 748 -0.1 - Term 1354 - 1399 12.1 3 3 Tu 1 . - CDS 1460 - 2662 1552 ## COG3203 Outer membrane protein (porin) Predicted protein(s) >gi|319805159|gb|ADMF01000016.1| GENE 1 3 - 357 215 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEKLLS >gi|319805159|gb|ADMF01000016.1| GENE 2 500 - 697 189 65 aa, chain + ## HITS:1 COG:no KEGG:VIBHAR_02798 NR:ns ## KEGG: VIBHAR_02798 # Name: not_defined # Def: hypothetical protein # Organism: V.harveyi # Pathway: not_defined # 2 53 282 332 336 62 55.0 5e-09 MVTPGQRYRGEDAEVLRRRRETMLEARRRHPERWITGRVLNCTPIKEVWLNPENGQLEEK HAKAA >gi|319805159|gb|ADMF01000016.1| GENE 3 1460 - 2662 1552 400 aa, chain - ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 365 1 337 389 96 30.0 1e-19 MKKTLIALAAMSAFAAAGTAAAADVTLYGKADLGLHYTYNKVDGQDAVNSFDMKSGQNAG SRFGLKGTEDLGNGTKVGFILENGFNADDGTMGQDSRLFGREANLFVTGDFGTLSMGRVG ALSSGMGSYNVVYGYAAFGTGWGDYAGAKSQFNLADRDRMDNTVTYVTPNFAGVKVYAQY SFSTKGQETAGNERQNQRYAGLGVKYDLGSFSTGLVVDTVLNNYANTNSEDSLGVTWGAS YDFGVAKVYGMAQYGKNENKLGGYSTSLLNDDDGAGNTTKVLSDEGLEGYALTLGVTAPV AGGTVFAQANYTDGQTSSDVVVKLTSGSSTPSVNVDADITRWGVAAGYSYPFSKRTYVYT YAAYNEGKADLTAKLAGKPDTSGSLKDKVGEFGLGLVHSF Prediction of potential genes in microbial genomes Time: Sun May 29 19:34:22 2011 Seq name: gi|319805114|gb|ADMF01000017.1| Sutterella wadsworthensis 3_1_45B cont1.17, whole genome shotgun sequence Length of sequence - 50040 bp Number of predicted genes - 46, with homology - 31 Number of transcription units - 22, operones - 10 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 121 - 180 4.2 1 1 Op 1 . + CDS 379 - 948 327 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 2 1 Op 2 . + CDS 971 - 5956 1681 ## COG4889 Predicted helicase + Term 5983 - 6025 8.8 - Term 5890 - 5939 2.2 3 2 Tu 1 . - CDS 6079 - 7893 1130 ## COG1479 Uncharacterized conserved protein - Prom 7923 - 7982 3.1 4 3 Op 1 . - CDS 8126 - 8461 303 ## 5 3 Op 2 . - CDS 8461 - 9141 535 ## COG3646 Uncharacterized phage-encoded protein - Term 9326 - 9362 3.1 6 4 Op 1 . - CDS 9435 - 9800 72 ## 7 4 Op 2 . - CDS 9797 - 10387 375 ## 8 4 Op 3 25/0.000 - CDS 10371 - 11477 939 ## COG1475 Predicted transcriptional regulators 9 4 Op 4 . - CDS 11477 - 12283 682 ## COG1192 ATPases involved in chromosome partitioning 10 4 Op 5 . - CDS 12303 - 12839 359 ## 11 4 Op 6 . - CDS 12843 - 13493 377 ## COG1484 DNA replication protein 12 5 Tu 1 . - CDS 13621 - 14064 386 ## 13 6 Tu 1 . - CDS 14211 - 14672 -261 ## - Term 15258 - 15288 3.0 14 7 Tu 1 . - CDS 15326 - 16045 548 ## gi|302859169|gb|EFL82252.1| hypothetical protein HMPREF0189_01972 - Prom 16083 - 16142 3.2 + Prom 16126 - 16185 3.0 15 8 Op 1 . + CDS 16296 - 16559 240 ## 16 8 Op 2 . + CDS 16561 - 17262 530 ## gi|302859164|gb|EFL82247.1| putative secreted protein 17 9 Op 1 . + CDS 17407 - 17691 364 ## gi|302859156|gb|EFL82239.1| conjugal transfer protein TrbC 18 9 Op 2 7/0.000 + CDS 17699 - 18001 177 ## COG3702 Type IV secretory pathway, VirB3 components 19 9 Op 3 . + CDS 18001 - 20439 2024 ## COG3451 Type IV secretory pathway, VirB4 components 20 9 Op 4 . + CDS 20436 - 20801 366 ## 21 9 Op 5 . + CDS 20820 - 21539 636 ## XALc_2643 putative conjugal transfer protein 22 9 Op 6 . + CDS 21549 - 23219 991 ## COG3704 Type IV secretory pathway, VirB6 components 23 9 Op 7 . + CDS 23222 - 23548 202 ## 24 9 Op 8 . + CDS 23552 - 24262 793 ## COG3736 Type IV secretory pathway, component VirB8 + Term 24449 - 24500 -0.8 25 10 Tu 1 . - CDS 24276 - 24566 261 ## ETAE_1623 hypothetical protein - Prom 24698 - 24757 1.8 26 11 Op 1 11/0.000 + CDS 24637 - 25437 653 ## COG3504 Type IV secretory pathway, VirB9 components 27 11 Op 2 . + CDS 25437 - 26606 570 ## COG2948 Type IV secretory pathway, VirB10 components 28 11 Op 3 . + CDS 26623 - 27870 702 ## 29 11 Op 4 6/0.000 + CDS 27867 - 28904 722 ## COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 30 11 Op 5 . + CDS 28904 - 31180 1457 ## COG3505 Type IV secretory pathway, VirD4 components + Term 31270 - 31310 6.0 31 12 Tu 1 . + CDS 31319 - 31708 206 ## - Term 31742 - 31780 3.2 32 13 Tu 1 . - CDS 31858 - 32544 90 ## MADE_00168 hypothetical protein - Prom 32579 - 32638 1.8 33 14 Op 1 . + CDS 32851 - 33285 366 ## gi|302859130|gb|EFL82213.1| putative type II restriction modification enzyme methyltransferase + Term 33309 - 33343 3.6 34 14 Op 2 . + CDS 33358 - 33594 203 ## 35 15 Op 1 . + CDS 33807 - 36716 1395 ## COG4227 Antirestriction protein 36 15 Op 2 . + CDS 36731 - 38575 1008 ## COG0550 Topoisomerase IA 37 16 Op 1 . + CDS 38782 - 39669 87 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 38 16 Op 2 . + CDS 39749 - 40018 133 ## 39 16 Op 3 . + CDS 40015 - 40452 153 ## COG1569 Predicted nucleic acid-binding protein, contains PIN domain + Term 40535 - 40563 -0.9 - Term 40369 - 40408 0.1 40 17 Tu 1 . - CDS 40617 - 40943 313 ## COG2076 Membrane transporters of cations and cationic drugs - Term 41350 - 41398 11.1 41 18 Tu 1 . - CDS 41540 - 43681 1939 ## COG3436 Transposase and inactivated derivatives - Prom 43707 - 43766 4.2 42 19 Op 1 . - CDS 43947 - 44297 287 ## 43 19 Op 2 . - CDS 44294 - 44719 397 ## 44 20 Tu 1 . + CDS 44835 - 45287 180 ## gi|126668854|ref|ZP_01739799.1| ISChy9, transposase orfB - Term 45518 - 45561 11.4 45 21 Tu 1 . - CDS 45601 - 49029 4198 ## COG1404 Subtilisin-like serine proteases 46 22 Tu 1 . - CDS 49609 - 50040 374 ## Ppha_0277 transposase IS4 family protein Predicted protein(s) >gi|319805114|gb|ADMF01000017.1| GENE 1 379 - 948 327 189 aa, chain + ## HITS:1 COG:Cgl1671 KEGG:ns NR:ns ## COG: Cgl1671 COG1961 # Protein_GI_number: 19552921 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Corynebacterium glutamicum # 11 189 2 182 184 142 47.0 4e-34 MPNSTIVGYARVSSVDQNLDRQLVQLKAENVEKLFIDKVSGKNLDRPGFSAMMEYVREGD VLVICSMDRLARSLMDLLDVTRKLQNKGVTIKFLKEKIELSASGETSAISKLLLAMMGAV AEFERSLIRERQQQGIALAKARGVYRGRKPVDSERLEEAKRRIASGIPKTKVAKDLKIGR TTLYKYLKS >gi|319805114|gb|ADMF01000017.1| GENE 2 971 - 5956 1681 1661 aa, chain + ## HITS:1 COG:MT2082 KEGG:ns NR:ns ## COG: MT2082 COG4889 # Protein_GI_number: 15841510 # Func_class: R General function prediction only # Function: Predicted helicase # Organism: Mycobacterium tuberculosis CDC1551 # 14 1649 7 1598 1606 1151 39.0 0 MSEFANNESAFEALLESIKQASNNIKRDAGTRFETLIKDWLTQDQSYCDLFSKVETFEEW ASSHPELEQSGKDIGIDLVATLEDDPDAFAAIQCKFYDKDAVVPKSGVDSFIAASNRDYF KQRYIITTNENWSENALTEMQNVTPPIQLVRRSMLASSRINWSVYLNTGKVVQQKKRTPR KYQEEAIQRVIEGFKTNNRGKLIMACGTGKTFTSMKIAEKMEGNNGFVMFLVPSLALLSQ TLTDWKRQCAVPIHAFAVCSDATTGKADLKNVDEITSASDLSYPATTKADRLAEEVKKAR SKTAMTVIFSTYQSIEVVSEAQHKFGMEEIGLIICDEAHRTAGGHYQDESDAPFQRIHSD DFIKGKKRLYMTATPRIYGDLVKEQKNNGEVVLYSMDDEQIYGPTFHTITFSQAVALGSL VDYKVIVLSVEENILKERALSDYELVQAGGLPVKHAAKVIGCWRALSKLDLVNEVSMSDD RQPMRRAVGFAQIIEPNIKYLDRTSSKRFTENFESTIEEFKDQQFEELSKKDKNLSREAY DLAYPLKCETRHIDGSMNATEKDALLNWLREEPEENVCKILFNVRCLSEGVDVPSLDAVL FLSPRKSQVEVVQTVGRVMRVSPQTGKKRGYVIIPIVTPAGLDPSVALNNNADFDVVWQV LNALKSIDTEFGAIVDGQRNIIDSSKIEVVCVTNKKLNKKANKNPKIIKPKPTKPTPPVQ EVFDFNHDEILEQEIRARIVKRVGNRREWGDWAEDVGKICQLQIKHINDVLKDPTKTKSR EAFESFKKELKATLNDSLTDDEIVEMLGQHVVTQPILDALFTIQTSEGTSYEFSKQNPIA IAMTSMMDSLDKESMRLATKSLEDFYRSVRNRTRTIKTSADRQLLIKELFEKFFKAAFPK QQEKLGIVYTPIEIVDFINQSVADLLKKEFNCSIADDGIHILDPFSGTGTFIARLMQSGL IPTDRLPNKFEHELHANEIVPLAYYVASMNIEGVFHELCPNEVYQPNRVMIWTDTFANNR QSSIFSTTLGENNARLVELNRQDIRVIIGNPPYSVGQDNANDDNQNEHYDELDDRIAKTY AAKTEAVNKNSLYDSYIRAYRWASDRIGNKGIIGFVTNAGWIDSNSADGMRKCLTEEFSS IYVYHLKGNQRTSGERSRQEGGKVFGEGSRAPVAIVFLVKNPASTERGKIFFHSVDDYLT REEKLACLREDRSMAYTQTNVIVPDAHGDWLNQRDDSYAKFMRVDGKKTKESSIFLNYSN GIKSGRDSWVYNSSRNRLCENIKTSINYFNACVDNLLSNKDYLPIKDDAKIKWNETQDTL FQKKEYAQKFDLTKIRLSVYRPFIPSFLYFDKFWNLRQYQMTKIFPESKSKNLVICSSGV DNLVICINQNAKDAGQIALMTDHIADLHFNGDTQCFPRWLPGEQSKAAEDTLDFGEPSEM PSGFSQEALPHFQAAYPGKPITEDDLFYYIYGILHSEDYRTRYANNLMKELPRIPRVATY EQFMAFVEAGQELARLHVHFEDVAPYAGVKIEYTKVGQPSYRVTQMKWGKIKGKTGNAAK DKTTLIYNDWITVKNIPLEAQEYVVNKKSALDWVVERACVSIDKASGIVNDFNDYAAEMG SERYPLDLFLKVITVSLETMKIVKALPKLEIHQLDKEASVD >gi|319805114|gb|ADMF01000017.1| GENE 3 6079 - 7893 1130 604 aa, chain - ## HITS:1 COG:TM0991_1 KEGG:ns NR:ns ## COG: TM0991_1 COG1479 # Protein_GI_number: 15643751 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 1 379 5 364 364 293 39.0 7e-79 MFSTYSSRVAELLQKIESGEIALPDLQRPFVWEDAKVRNLLDSMNKGFPVGYVMLWDFPD DYDAKPRSSAIAKSGTRSVRSLLIDGQQRLTALLSAMDGIVVKDKDYRDRRIRISFNPLA KADDGKQIGQFEVWTSATEKDPEWVSDITEVYKLAAENPTTGVFMFCQAYYSAVNASHEK KGLALLTTEEQAVVYNNINKLLGLRNYNLPVVSIDRTASEEDVAEIFVRVNSGGQKLLEK NFIETLLAVYDNDIHWKISQFCESARVPKDKSAYNHIIKPEPSHLIRAAVALGFDRARLK YAYMLMRGRDLTTGKTTKKTQEENLTKFRDAMEKVTNLNNWHEFLNLFPAAGYINESLIS SDNAVIYSYALYLLGKYKFGISANKLRHALTRYIFTVTVNATYSGSSETMFEGQLAELKN CSTPEDFLAYIDGFIATRFTESYFEITLPDELKTSSTQAPTWCAFVASQIVLGAQVWLGT STVATLLAVGSSGSKRAFDKHHIFPKNYLNSIGIDKKVDCNQVANFVFIDYQSNIEISDR APAEYLLEYRNRLGEKAFVESCEMNAIPSAIENMTYEDFLKARRVLMAQMIKAAYLKLAG KAEL >gi|319805114|gb|ADMF01000017.1| GENE 4 8126 - 8461 303 111 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAEITNLPMFDEYAFIEQHGRELTSDELEVLSERIDNLDRHIIAFNDATIDMLHRAISD QAFEEGSVVAANLLELLAGMQRYVYRAREALAECTTDETPSELEFSFLSDT >gi|319805114|gb|ADMF01000017.1| GENE 5 8461 - 9141 535 226 aa, chain - ## HITS:1 COG:PM1774 KEGG:ns NR:ns ## COG: PM1774 COG3646 # Protein_GI_number: 15603639 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Pasteurella multocida # 20 119 35 129 239 62 40.0 5e-10 MLKVVNQGTHVPVVDVVDGVATVESTNIAEVFEKRHDHVLRDIENILISLPSERRDNFIE IQLDRINNFGATVQSKAYRLTRDGFTFLVMGYTGEKAARFKWAYIDEFNRQQTLLESKAL PPTQSERTMFAGDSLAENVLRGLSGQMDAETVGDKLVTIGTVLQVVGTIQKVPASGPQLQ AALNAFQQALEESCDADELEKQRRRSLKARNAARARWDRIRQGGAE >gi|319805114|gb|ADMF01000017.1| GENE 6 9435 - 9800 72 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKREALLALAAGFRESNPKLAEHGFVTIYKGTVTGWKRTLNRPGTEVPGAYAVGADASIF RACGGDEEHGAHAFLLATGECLHADDESSECSQACSECSEHRSNDCGASIQANGLDNASS R >gi|319805114|gb|ADMF01000017.1| GENE 7 9797 - 10387 375 196 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDKTNDSAVLSLRLQGAALAELTERAQYVGKTRSRFARELIMKALAVPAPARTIFRTVDA EELTKPYALKLLLKESENAALTRISTAQGMSRQQLVIGLIRMAAASEAQFTKDETQTLYA ATWELRKIGVNINQIARRLNEEAKAGRLHGTEAAQFLKLSTALTNRMEHVVGKVGDLIKA SRARCKLVEVARENQS >gi|319805114|gb|ADMF01000017.1| GENE 8 10371 - 11477 939 368 aa, chain - ## HITS:1 COG:SP2240 KEGG:ns NR:ns ## COG: SP2240 COG1475 # Protein_GI_number: 15902043 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 29 172 7 146 252 84 36.0 3e-16 MALDVSRLKAMTEGYSSLGHQPGNSVLEIALDKIERDESQPRKNFDEDTLRDLAESIEAY GLLQPIVIRKKPNALDRYIIVAGERRYRASQLLKARTIKAVLLETNPDDAELGYLQVIEN IKRDALTTAELADFIAARIAAKETAVSIGKKLGISKPQMTRYAAWAEMPESIRELVRLQK VPSIKIAYELYRKWKETPEAVEAAISEAADDFEWTMAAVKRIGSAPEAEVVDIEAEERFE AGQEPDGGETPEEPQVVETKDTEVQWDVGADEDDEPVASEGSTDFEEEGGVAEVSFEEAA VETTDARSANTRLPRVVVSIDGREAALILKHTADGFATVKFLDGGDVEVVDVEVERVCLL RVDDGQDE >gi|319805114|gb|ADMF01000017.1| GENE 9 11477 - 12283 682 268 aa, chain - ## HITS:1 COG:XFa0060 KEGG:ns NR:ns ## COG: XFa0060 COG1192 # Protein_GI_number: 10956770 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Xylella fastidiosa 9a5c # 2 231 8 228 254 92 31.0 6e-19 MNEKGGVGKSMVACQFAFYAALKRGLRVLVLDFDQQGNTTNTLTHSGKCCVATVSTGKLL VNAEVPSAEELDAPFVLMPADNYLVQLERTGVTNHQTFILNLNNALETLDDQFDLCVIDT NPSPDVRATAAMANATHVLAPLELKQESLDGVFELLNKVRGVQESLNPELQLLGLLPNLV EKKPYQIAGLNALLTGAGKFLFMLPSGKPAAIPNAAAIAEAQGDGRPLWEGPRTKVERVS GICRQVWEAMADQMGLENRAEQQPQEKA >gi|319805114|gb|ADMF01000017.1| GENE 10 12303 - 12839 359 178 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNSLRKPTRLTTRIEKATLVAIELLHPNLEHELAPISSRQLLDSVQHSMPNDQVTESEL LIAMNKLHQKGHLAELQIQAAPEDGSLVFIVRGSGYAERSRGYKQSWRRKYTAYGLKYTI AFLTPEQAELVQRLHSANLARCKAAIARDANAKLAAAVQPVEDAATQALKSAVMAIGG >gi|319805114|gb|ADMF01000017.1| GENE 11 12843 - 13493 377 216 aa, chain - ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 29 197 87 253 282 64 27.0 1e-10 MLQKLEEARGRAWSYRQLFGEWLPKAFDFPLESFEVLDAAMGDVYCVAEEYVRNFYRYRS EGRGLFFTGTAGTGKTKLACGVLKSLFPDVVGCYVTLSDLGDRVRQTWRNASGENTPFTE AQLLNAVYRAPLLVLDEIGTIAKPQDGELLFKVINTRYSNLLPTIGISNLSLTDLCSLYS DRLSRRMEERNQTIVFDWKPWQERKKQNENGFFSGR >gi|319805114|gb|ADMF01000017.1| GENE 12 13621 - 14064 386 147 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQLQVVADRVIANKPGDFAYAVRYLLTACTNELAAAKAGPPATAKAPGGLVKVAPVMAP QKTEEEEVAALERFLQQGANPFCLPDQKLPAVQRLLERARDDWLMAGKAVEGISPAGKPV RDPRVAKQIKYYGVEDAKARIAKQRRN >gi|319805114|gb|ADMF01000017.1| GENE 13 14211 - 14672 -261 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAALPPSNPPGLSRKLTRNSLILPSSARMRKKKTTQFSKLLPSKAQMLPSIRRSCKHGAS IPSMRKHGLRRKTCPLTRDRRARRAQARSMKACSRGLSPRKATRMHKESLKPAKLPSIPP RRRKARSTFPKNPAHSPKLLHKHSRARMYARRI >gi|319805114|gb|ADMF01000017.1| GENE 14 15326 - 16045 548 239 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859169|gb|EFL82252.1| ## NR: gi|302859169|gb|EFL82252.1| hypothetical protein HMPREF0189_01972 [Burkholderiales bacterium 1_1_47] # 6 239 4 230 230 84 29.0 6e-15 MTEKSIYDIRRENLNILIDVYGSIARINQLTGRPRTDSSLSQIRNQTVNTVNHNVRRMGK NLARSLEKQLRLGEGWFDVEHPDGNSVAVINVPFGQDDDDGTIKISPIEKPVGTGGSSPL NPKKDFIEMGNRFFDKIIGAPGGATHDPSGLRFHEADSDAFAEIPRDTILIVDTNVRQFT KPGFYLIRVNGNDLLVKIRQGIDGQFLISADDSLHEEKPSLDGVAIVGQAIYGWKGFRL >gi|319805114|gb|ADMF01000017.1| GENE 15 16296 - 16559 240 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRSTGYRKEPLEARMAETSLSSISFLTAKQVAQIFGVTPKTIYAWVRADRGFPKPVRQR KRYTRWDSRDILAELNRRPLEPRTSEG >gi|319805114|gb|ADMF01000017.1| GENE 16 16561 - 17262 530 233 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302859164|gb|EFL82247.1| ## NR: gi|302859164|gb|EFL82247.1| putative secreted protein [Burkholderiales bacterium 1_1_47] # 41 233 1 195 195 173 46.0 9e-42 MIKGILAATILSSLMAGPVIAAVTGPVSTNSDALYPADQLMTGDDRWGCELLLCLANPNG WKSVSECHPPVEKYIDCSTKRHNPCSMPGCPQSGEGNYAQRNDGRYDPCMLLGEGYEEAP RGYLLQGVLSSSEFSRSGGRYYAKKRSKYNYDGEYESCDSDGHCTTVHSKACVKSADYQG VAYERYSCKNSDGYSRTCYRQVRVYSAISWQNAQPPRAIDVYIEGKLYNRVHY >gi|319805114|gb|ADMF01000017.1| GENE 17 17407 - 17691 364 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302859156|gb|EFL82239.1| ## NR: gi|302859156|gb|EFL82239.1| conjugal transfer protein TrbC [Burkholderiales bacterium 1_1_47] # 1 94 1 92 92 67 43.0 2e-10 MKLNRFQKILPLALLTAVAAEPTLAAAGTQSVTNFFNTIQGTLQTVSLVVVTISVMWAGF RVLFMGNAFQEVAKPLLGGIMIGSAGWIASLFVG >gi|319805114|gb|ADMF01000017.1| GENE 18 17699 - 18001 177 100 aa, chain + ## HITS:1 COG:BMEII0027 KEGG:ns NR:ns ## COG: BMEII0027 COG3702 # Protein_GI_number: 17988371 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB3 components # Organism: Brucella melitensis # 2 100 16 114 116 63 40.0 7e-11 MRTSPIFKGATRPACVMGIPIKPFVAVCGLGLLLGFWLWMPLILLVPVALRIMSQITAKD DQAFRQLWISWQTRHVGQLNKRLWGSVASLAPTDYKRKER >gi|319805114|gb|ADMF01000017.1| GENE 19 18001 - 20439 2024 812 aa, chain + ## HITS:1 COG:BMEII0028 KEGG:ns NR:ns ## COG: BMEII0028 COG3451 # Protein_GI_number: 17988372 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Brucella melitensis # 3 806 5 820 831 691 43.0 0 MFTEKAAQMRRERAIDKFITLSSVVDDGIVMSRNGSLIATIRVEGIPFETADDEFLDRRA DQLNVLLRMIAADDTAIQVHRIRRFVRDRLSEPSAPGFARDFTLAYNNLVDQKPLMATEL YVTLIERDLAPRSKARSVEVVEEALMERLKNFRNRVETLLQSLGKYGPRHLKETEVEGVR FSEQLSFYNFLLTGCWQSVRVPSSPLYQALGNVQVFVGSDVLELQSLEGRKFAQSVEIKD YALETFSGILDDLLYQKSATRSQSAHYPFIETQTFAFLSKAKGLKALQLQQKQLLSSKDA GRTQILQMSAAMDGVANGIFVMGEYSYSLLVFGDTEAEARSYAQRAVNSLADSGLLPFIS THALVGSYLSQQPDAWSERPRLATLTSVNFSHLAPLHNFPQGKRNGNPWGEALALLRTPS GQPFYFNFHTSKPGENAFDKKTLANTTIIGTSGSGKTATLNVLLALAQKYRDSDHPLTTI YFDKDRGAEIAVRALGGGYLTIRNGEPTGFNPFQLEPTPANIQFLNRFIRLILSMDGLPV TPEDEEKIAGAVAAVMSMRKEHRLFRVLLENMTEGATREEIARSVPKRLKKWVVGGELAW VFDNETDTLDFNTHPNFGIDGTEFLDNRSIRSPIAFYLLHRLEEVIDGRRMFFIMDEFWK WLLDEAFSDFAFNKLKTIRKQNGFGVFATQSPSDVLTSPIAKAVIEQSATQIFLPNPKAS REDYVDGFKVSDVEFEIIRALPEDSRTMLIKQGTTSVLCLMDLGPIGWSLKVLSGSTDAI HFAENLRSTVGESPTAWLPYFLGQKQLSSDSL >gi|319805114|gb|ADMF01000017.1| GENE 20 20436 - 20801 366 121 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQAFRTFTLTIGCLLFAAVSLATAATLPHKYDRSQVEAFVDSLAVDELGCSMNASADFS ALTEDWLMEDYFEKDAQAIWEKWATFQGRCKAKFGKSNTGWNKAYRYRFHKESRWNKLRG Q >gi|319805114|gb|ADMF01000017.1| GENE 21 20820 - 21539 636 239 aa, chain + ## HITS:1 COG:no KEGG:XALc_2643 NR:ns ## KEGG: XALc_2643 # Name: not_defined # Def: putative conjugal transfer protein # Organism: X.albilineans # Pathway: Bacterial secretion system [PATH:xal03070] # 7 220 11 220 239 78 31.0 2e-13 MKKRLCTLATLFVISNAMATGIPVFDGAAATNFITQWTQMLKDYQMLTQQYNQAVQIYDQ AVSTYDSMTGSRGFGMLHHSQNWIRLMPESLQENFNRTFSDGYSALSSRGRSIYESMNLE ARCADWDGTALEGCRNEQAVTAEYMASLQEIDNVTSQILTEVQGLMGEINRTSDMKGASE LQAQIQAKMASLNAARTQASVQLAQMQSMQREAARRETERLHRSSFSEVSEDEIEALCR >gi|319805114|gb|ADMF01000017.1| GENE 22 21549 - 23219 991 556 aa, chain + ## HITS:1 COG:XFa0011 KEGG:ns NR:ns ## COG: XFa0011 COG3704 # Protein_GI_number: 10956722 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB6 components # Organism: Xylella fastidiosa 9a5c # 2 290 11 284 348 69 23.0 1e-11 MYFASFGEEVLSAISSFASQASSALIDEIRIPLLTCLTIYFLIKGYLITYGRIDSPLSDF ILTAGKILLVTYFGLNALNYVNDVIPAIRGLENMLVGILRLPGAGNVDTQGAWTAIDDMW KQLMLVTNVALSTAGKVSVVSAFGTWLSLFFLGLLMAAISVALTFAATGVLIINEISLTL ALAFGPLFICCLMFPAVRSWFDGWIKAVVTYVFCSVLVAAVILLVTNIFHSFATDLLNSL RAYESGRPLISVWLPVLKFSVLGLALTSLVKLIPSIAAAIVGGVALQAAGLGQMMNDTWR GTRDITGGFVNGLGKGSGSTDLQNYSRSHLMSRDGFGEHGTVGAAAFGAALGGTYRLGRT LLSVMQNETAVQSMASNSQNTTTTAAPRTTATNQQAAQARTVAVSAGVAASAGVAASSSS SASAFTRQETPEETLARMNAAAATRQSERVAQFAAQDAAFRAEEYASVSATTTAPQAATP ATGFTTQSQEAAATPAGHSASASMAERVAASTPAATTSPTSETASSQEPPVERHQAPNED VARTNADILRDRLPKS >gi|319805114|gb|ADMF01000017.1| GENE 23 23222 - 23548 202 108 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSPLQICCALALTSLFLTGCGAPKPPLPSGERIPVNTVPHSQTVNRSRLADEPPSLDPF EKPAVAPVVVPLADFLPPDAASESAPVVLQAAPAENLSPSPDDQSAKE >gi|319805114|gb|ADMF01000017.1| GENE 24 23552 - 24262 793 236 aa, chain + ## HITS:1 COG:BMEII0032 KEGG:ns NR:ns ## COG: BMEII0032 COG3736 # Protein_GI_number: 17988376 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, component VirB8 # Organism: Brucella melitensis # 1 235 1 235 239 170 41.0 2e-42 MSGQKKKNQATTAKAPKTDAKYADAIGWESSRLSLAEKSEARAWLTAKILGATNIALVAA IVIMMPLKETLPYVIEVDKSTGMSTILSVANAEEIPVSEVMDKYWLSEYVQAREAYDYRT LENDYIKTRELSMPNVFEPYSRQFGTDKNSMEQTIGDTKRILVELLSVVPNGNGIATVRF RKKLVDTQTGQPEGADVWTARIGYEYVPTFKVEEAKRLINPFGFKVTTYRVDQELK >gi|319805114|gb|ADMF01000017.1| GENE 25 24276 - 24566 261 96 aa, chain - ## HITS:1 COG:no KEGG:ETAE_1623 NR:ns ## KEGG: ETAE_1623 # Name: not_defined # Def: hypothetical protein # Organism: E.tarda # Pathway: not_defined # 4 96 9 102 102 70 46.0 1e-11 MKATKTWRDMLSKSLSDPNFRKEWEEANAELAELDKIIAARASAGLTQADVAAHMGTTQS AVARLESNLMRGRLPSGRTLTRYAKALGKRVVISFV >gi|319805114|gb|ADMF01000017.1| GENE 26 24637 - 25437 653 266 aa, chain + ## HITS:1 COG:BMEII0033 KEGG:ns NR:ns ## COG: BMEII0033 COG3504 # Protein_GI_number: 17988377 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB9 components # Organism: Brucella melitensis # 37 261 3 238 247 144 37.0 2e-34 MALFACKSALALDTPTVSKLDRRLYTTAYEENQVYPIYAVNGLVTSIVFAEDEKVDVHTS GFSTAWEFAARGNHFFLKPRAKEGSTNLVVVTNKRTYHFDLRLGWNRKTATYELAFTYPK EEATKRAAASEKERVEVRLKTSATKPASVAEAPASNRDYTMNFGEAKSSRSIAPMEAFDD GRFTYLRFGKSSDFPSVYRVVDETETLLNAHVEGDWLVVHGIYEALRLRAGQAVVGLYNE NYTGGGADTEAGVSVPGLRRVSVGGQ >gi|319805114|gb|ADMF01000017.1| GENE 27 25437 - 26606 570 389 aa, chain + ## HITS:1 COG:BMEII0034 KEGG:ns NR:ns ## COG: BMEII0034 COG2948 # Protein_GI_number: 17988378 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB10 components # Organism: Brucella melitensis # 168 384 43 260 265 211 47.0 3e-54 MFDKKKEETAAPEPSDLAAGIPSVAGKRSTGSKQSAFLLFAACVVVGFIGIAAWQFKGTL LGSDEAEVVPENDLNVYTSSKSLTVPPVPPKRAEPKPEPDPVVKEEPEEKPPLPTTPPPL PVQPVAVAQPVQPQKQEPTLEERRFAAPLMSANSDGPSAAPVQGAPDDMDSAPRGDGGRL GSMLSAVDTPGVRARRMPNRTFLLPKGTFIDCILETKVDTTVPGMTSCVIPRPLYSADGK VLLIERGSKVIGEYKGAVENGLNRIFVLWTQLQTPTGVRINLDSPGTDEMGGSGLSGHVD YHWWKRFGNALLFSLIQDGFEFAGNQASDNNGGVNYYQNSQDGMEEIVREAMRQSGNIPP TLTRNQGSRIGIFVGRDLDFSSVYGLALR >gi|319805114|gb|ADMF01000017.1| GENE 28 26623 - 27870 702 415 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTPRYIREYLTAHPDAHRDEVIDRLGYDFEHETVRGPVYDSWGESVMDEHNCLELREEL QELLASFKTEDSKAAYEIARLGLNPQQLTEYRTSISSFVTSCLDAYEPKLTDFIVEAVDP EEEVRPAGSLRVQFLDGYGDRLVGTYVRLAPAAANSSPDQPLRMELSREMVIENSEGYES PDMLPSVRHAVQRHLLTHYDQIREEAIAVTEERSSELEAGNEPATAEMPPLHYAVRDAAG DLAARTPDLAALYRESFPDYQLDGNSTLEDVRNTVQQRQVTDELRFTERLVHGHGFSWEA AERVETPNPSEHLFLCNAQGDVVMKVNPETTQAEVDREQAWAKEREPVVAVLAESYRKAG RPEKFVSEFAKRLDEALKSAQIDGKTFSLNVYDRNAPSKNAVTIELKQSSKERTR >gi|319805114|gb|ADMF01000017.1| GENE 29 27867 - 28904 722 345 aa, chain + ## HITS:1 COG:BMEII0035 KEGG:ns NR:ns ## COG: BMEII0035 COG0630 # Protein_GI_number: 17988379 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis # Organism: Brucella melitensis # 4 344 17 350 361 360 56.0 2e-99 MSARNTSVNHFLEPLRPFLSDKAITEIVVNRPGQVYFETRAGWKAKDVPQLTYEHLIKLG VAVAKFAGENVLFQSTVPILSAVLPGGERAQFVMSPACRADTVSLTIRKPSFDVRTLDTY ISDGFFDRIQAANRLNTADGELLERYKHIHDMPQANERRAEFLQRCVELGKNVVIAGETG SGKTTFMKALMQCIPTSERIITIEDVPELVYGLPNHDNQVNLFYPSEGGADATVTASSLL RSCLRMKPDRILLAELRGGETFDFLNVCLSGHGGSITSCHAGSCAGVFEYLALKVLQSDT GKTLPYDVIRKLLYLTVDVVVHIHNDRAIGRHITEIWFDPSVKRF >gi|319805114|gb|ADMF01000017.1| GENE 30 28904 - 31180 1457 758 aa, chain + ## HITS:1 COG:XFa0016 KEGG:ns NR:ns ## COG: XFa0016 COG3505 # Protein_GI_number: 10956727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Xylella fastidiosa 9a5c # 14 556 2 542 656 410 41.0 1e-114 MSQKSTKIARTVFILLGIAIVIIGIPWASGVTFLHVNGADPALAGPFSIIEYWKLYAHSS EKFVRVSVQLCAIGPWALLAGFIGWAVIAKQNRPLHGAARFANTAEIRKAGLLDPKGGLD KTILVGKKNGRYLTYGGYQFVILAAPTRSGKGVGIVVPNCLNYSDSLVVLDIKGENFDIT SGFRAKHGQKVYLFAPFDEAGVTHRYNPLEYISDDPAQRLGDIDAIGTALYSGGNQNDKF WSENAKDLFRGLCLFVLERKDLPKTFGEILRQASGKGKPLKEYIFEELKKAQDTGHPFSN ACIDCLNRVLSNSENTLAGIVATFGTPLLIFQNPRVDLATSANDFDLREVRRERMSIYFK MPPNKLKEGSVLVNLFFDQLLNLNTRVLPSQDKTLKQQCLVLLDEMTSIGKVAMIAQAVS YMAGYNMRLLTIIQNKSQLEDVFGKAGALTLLSNHALMVMYAPSPTVQSDAQEYSEMLGY ETVKSRSRTSSMQSSSTSTSDQRRALMLPQEIRELGQTREIVSLENCKPILCDKIRYYED PDFTCRAHLPPPSIPKQDIDTFIAKIENRTRPMTAGEMAAPSEAAAKVVLEGLQELPQSA VAWGQDEVESFVDFDVQAALSSLTFAPRTEVPRGISSDGIADQETKDALVADIFDVTDTD SNETSESLQNSGPATVADAITDLADHLTASEDEVAESSDELDTDTAAEDSADADTADLQR TLESIDALMNPTDATKAELPIEKFYSKTAVRDTRRVGS >gi|319805114|gb|ADMF01000017.1| GENE 31 31319 - 31708 206 129 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRPLLTLFLVALLSGCSAAIQYHPFVGDAQVLKGSGGACDNVEGVEIWVKGAPSKPFTV VGYIDGQYTEDIGEEVALKRLIVKKVKEVSGSGVIRTSCSSGRGDSYFVGNVLITDTDIK DEYVVFRYQ >gi|319805114|gb|ADMF01000017.1| GENE 32 31858 - 32544 90 228 aa, chain - ## HITS:1 COG:no KEGG:MADE_00168 NR:ns ## KEGG: MADE_00168 # Name: not_defined # Def: hypothetical protein # Organism: A.macleodii # Pathway: not_defined # 1 210 1 206 344 103 29.0 4e-21 MSRDQIKYDEVSQALSGARLGTYLRYSKNDVAGAFQLHHVNAQLAASFWEPLELFEVVLR NRLADCLTQTFGSNWPVQPVFARVITKEARSILEEGIQDAQRAKGEAVTTDDIVSSLKFA FWEKILNKKLHNLIWKSTLPSRYPLFGRDAEALRMELQTATHQIRCFRNRVAHHEPIINE DLWRQYKRIHRILRYSFPGLASWLNSCQTVQQGLDQLKSVLAGLSKSL >gi|319805114|gb|ADMF01000017.1| GENE 33 32851 - 33285 366 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302859130|gb|EFL82213.1| ## NR: gi|302859130|gb|EFL82213.1| putative type II restriction modification enzyme methyltransferase [Burkholderiales bacterium 1_1_47] # 1 144 1 142 142 91 37.0 1e-17 MSDFQDISTSVVVHGAPKVEKFTPMSGQNAGKEQTVLNFRAYHPNFQRQEDGSFKMLDSD WYDVKYNGKAIEQVQGLLKDGMTLEVRGSMRERVWKDRDGNDRTSHEVFAKSLGLSLTQP GLTGVEFQKPDRNRQAQAEPTKER >gi|319805114|gb|ADMF01000017.1| GENE 34 33358 - 33594 203 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEETLTPQERRALIENIKDTAIERSVLHHYGLSEKEAETFGAFEEASLTTEETDDLVKEF FEEACKDPAVLRSSGDRP >gi|319805114|gb|ADMF01000017.1| GENE 35 33807 - 36716 1395 969 aa, chain + ## HITS:1 COG:XF2061_1 KEGG:ns NR:ns ## COG: XF2061_1 COG4227 # Protein_GI_number: 15838653 # Func_class: L Replication, recombination and repair # Function: Antirestriction protein # Organism: Xylella fastidiosa 9a5c # 1 227 279 511 522 210 49.0 1e-53 MTFKQITDAGGHVKKGSRGVPCLYWADKWLDAEGKPLSAKEVRELPPESRQRILIPCRFV VFNAEQTEGLNLPEWKAPEVTWDPNERAEKILKASNAVIHHKLGNAAFYSPSTDSITLPE RGQFANASDYYDTALHELGHWTGHESRLNRDLSGRFGTPDYAKEELRAEIASMMLASEIG LPHNTQQHAAYVASWIKILKEDPAEIIRASADAQKITDFVKNLEQERYYVVDYEKNAVLR LTHPEWVAGVRKVLNDKPKALAKFESFLVPVQGNTLSPEHLERNACNALLNPTDPRSQIL LPITLHRGAVATSDPHHFIGLAKLQPGLEDKAFRFLQRIDGNDVADKARADWAQEEARNS TTALAFGLNSHNYWKALEKITAKEKTPLETAAEKFPAAAPEEQKLVAREALAAVKAEKRF YLIDFEANDASVVTHRELMAKAGAILQENPGAKQEFEEAFVTETKAGKIVRNSDPNRKER QVLRRLLDPTLPWSNLEKCPVNHAGLFYTDNPLRAVAAASFYSPDLAQKATALVARVDSG ITVDDVHRQLQAPEIAESLTPQRLCAERYWKTLESERTKAAFPKSIETLEPSSSGKKFYV LDFERNGVQRLTHAEYMQKARDILEKNPRAKAEFESAWGIALQRGKMTQERERNLVGMVL DPADAWSFLHGVYADHQGLFVTDRPALAVQVAKLKSDDFGNLVFKEAAKASRGFSLQTLQ VESIQPKFLGEMSTIRLHCGKHWAILAEKRLLRGSLEANYLQEPLREKLERLPQSDRDEF KQMAVAAICQEDKERYERNNTYYAVDFKTRMVHRWSHEQVMRQGLYIIRDNPKALARFEM EKKEAVLKDGTSPEKAEASALRERVSPASKDWMVGIDRGHPGFFFSKDPAESMAAAAKVS PDIARRIEMRVRLAEGETAASLAKVRATALEKSPAFQANWAIQPSPGKAAEVDLKNTAAE PQRPRTLER >gi|319805114|gb|ADMF01000017.1| GENE 36 36731 - 38575 1008 614 aa, chain + ## HITS:1 COG:XF2059 KEGG:ns NR:ns ## COG: XF2059 COG0550 # Protein_GI_number: 15838651 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Xylella fastidiosa 9a5c # 1 611 1 614 685 610 52.0 1e-174 MRLFIAEKPSVAKAIVAELGCVTRGDGFITCKDGSVVTWCFGHLLEQAEPDAYLPDDVPR TKKGSKVWRFEDLPIYPKNWKLLPKNDKGVKKQLATIGKLLKKASLVVHAGDPDREGQLL VDEVLEHFRYTGRVQRFWVSAQDSASIRKGLTNLRDNETFDGMRLAALGRSRADWLLGMN LSRAYTLARQAQGKKELIAVGRVQTSTLALVAKRDVAIRDFKPVPYFVIKARLGGGKPFT AVWEPEESQAGIDEQKRLVDRCIAAALQQRLKAVGQATVVRCSRTPKKIAQPKAFSLADI QLGASNQFGFSAEKTLNLCQSLYETHKATSYPRTDCSFLPESQYADAKNVLAAIAKTMPP LAGLVAKCDCSIQSPTWNDKKITAHHGIIPTQQAADGSKFSDDERKIYRLIAERYLSNFL PAHEYLACSIELRIATERFSAKGRLVTKPGWKVVTSAADEDKADDEGQALPELKSGLQLP VSGIDCEEERTKPPAAFTEGTLIRAMENIHQAVNDPQSKKFLKEGDGIGTPATRAAIIAE LKRKKYLEVKGKKIVATELGLHLLQVVPDVMKNPVLTALFERILREVEAGNVPLDVFIEK QKQLVINELRRLRK >gi|319805114|gb|ADMF01000017.1| GENE 37 38782 - 39669 87 295 aa, chain + ## HITS:1 COG:XFa0047_1 KEGG:ns NR:ns ## COG: XFa0047_1 COG3843 # Protein_GI_number: 10956757 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Xylella fastidiosa 9a5c # 1 229 59 270 279 92 29.0 9e-19 MKAAADYISRNGKLEIEDQDGFTHGSKEQVQAVVRQWGLQSQIPQEESSNDRRAHGRRII LSMPAGTPPEGFKAACRKWAQDTLSGYDYLMAFHTPENDRRTTQPHCHILLRTIGHDGRR FHIDNTRREEMREHFAVCLRKQGIEANATQRWQRGVTRRSLGQPEFHNARKVQTNKERAR KHAIARKKKTLLLKTMQNRLMDVERSVRSRKPIPDPPGIVKAKAKRQELTDLLNDVINEL NAGSSQDKMLARAAKEHLQKLPPVKSAAQETVSSLTDKARHAMQAEVKRTPIKNR >gi|319805114|gb|ADMF01000017.1| GENE 38 39749 - 40018 133 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQSATRIANVKWNISVPPDFDEATRIYLASQGGKKGSLSSLVQKAVSRYILSSLTGEAK EKVRASGLSQNELDKIIADGIAWAKDQSR >gi|319805114|gb|ADMF01000017.1| GENE 39 40015 - 40452 153 145 aa, chain + ## HITS:1 COG:XFa0022 KEGG:ns NR:ns ## COG: XFa0022 COG1569 # Protein_GI_number: 10956733 # Func_class: R General function prediction only # Function: Predicted nucleic acid-binding protein, contains PIN domain # Organism: Xylella fastidiosa 9a5c # 1 138 1 139 139 124 48.0 5e-29 MKVVLDTNVLISALISPHNPPDLILQSWLAGDFELLTSEDQLEEIRRVSRYAHLQPFLQP HRVGVLVNRMRSLATIVRPESLISEEALDPDDNFLIAICEAGSANNLVTGDQRAGLLERR HIGATEILTAAQFAERYLGWRVQRS >gi|319805114|gb|ADMF01000017.1| GENE 40 40617 - 40943 313 108 aa, chain - ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 4 108 52 155 155 64 36.0 4e-11 MLSTWALLMIAVVTEIAWGCSLKALSYYSLDRIFALVPIALTCANMYLLARVMKTLPSGL TYAVWTTLGAAGVLIAGAFLFNESLNKGQIFFISVCIVGVVGLHLSSH >gi|319805114|gb|ADMF01000017.1| GENE 41 41540 - 43681 1939 713 aa, chain - ## HITS:1 COG:SMa2171 KEGG:ns NR:ns ## COG: SMa2171 COG3436 # Protein_GI_number: 16263632 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 189 664 83 521 545 72 24.0 2e-12 MSVDFSRLPREKLIALLLESRKQADAAKAEAAVALQHAAEVEVRLDLSEKKYAAAAVFLS EVAPLIHGMRLDVERNIGADPEANKQLFEDLLKCVRQLVAEARNAEKFKELAFGKGGEKL NPELAKLLKHKRNIQNDIKALEDGLRQAERAQAALAEIQKEQNKALAGKEASSDNAEGKK DPVALMATISNARTPKKPEDEKSADGKKRNLRGWQKSKNEVLRIPETADAGVCPTCHFKL KELGVQVARLAAVLQSLRDRFVNAEYKIPLCYCEKCRTVHPLFPKDMQFPVKPERTIPMT CLAEAAKLLNNGLPINRVEVMMFSRLKLGSNTLFENLCDWANIYIEPLMKHIVQKCGDRV FLADETRYDILEGEARGAYAEKEKTSSQTYVLSVGTKTNSSTPFVWFSALGSRKAEDIGE LLESLQLTMDALVADGYAGYDALSDTVPSGVRRQSCLVHARREAYGTVTSKLFLSELNKL TPQERAERIRAQALAGTTEARMLSILSGCQLLFQYEKEVAERLENESDEEHGARILKHRR EYSAPVFDAMDELYKGLAETLAKEKNGKYVKTIDTAAAGAVVYWMNRRESLRQFLEDGRI PLETNTVERSIRPVAMLRKNQNFMQTLDGMNAVATCLSAAETARLNGIDLEEWLNDYSAA AYKHAYAKGWTQAYREGKDPNKKIQKWPMEKLLEDFDRTPWLPWEWKKRQSAD >gi|319805114|gb|ADMF01000017.1| GENE 42 43947 - 44297 287 116 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIIDFKARRTTLVASPVDGRSGIPTLTTLAESLLGIPITKGEDYVVFVSRSRKVCKIVFW DERGACMVVRRLNDGRFARFLMRASGPAAAPITPDELAAYLDGEDLQAERRGMLKN >gi|319805114|gb|ADMF01000017.1| GENE 43 44294 - 44719 397 141 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDSIWRRAYDAWQKSGLTRRAFHQTHISTFFPEQPPCIWTLYKKFQQIERLIEAEAVSR IQNAGTVAVVELPAVPVHASKPSRISTIPKKPVPIVRPQRCSNRSAREVRLKLPNGTLLE FTSESPELLAIGMMQTAGGSS >gi|319805114|gb|ADMF01000017.1| GENE 44 44835 - 45287 180 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|126668854|ref|ZP_01739799.1| ## NR: gi|126668854|ref|ZP_01739799.1| ISChy9, transposase orfB [Marinobacter sp. ELB17] # 2 100 358 463 485 84 43.0 3e-15 MGKFVEHLKRKAESAGCEVIELNAYKLKMSQYDPPTDAYRKKPLKERWHRWGNTGTLVQR DAMSAFLACHATEKGHDRALLLEKWTTAEALLSGSGLCRHEPCSDPEVSKGASGLTKPNC ESKAERERGLPHTLCTDGDVQAALPPERAV >gi|319805114|gb|ADMF01000017.1| GENE 45 45601 - 49029 4198 1142 aa, chain - ## HITS:1 COG:PA3535_1 KEGG:ns NR:ns ## COG: PA3535_1 COG1404 # Protein_GI_number: 15598731 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Pseudomonas aeruginosa # 21 512 3 407 453 253 36.0 1e-66 MNRVFKTKWSVAHQEYVVTDEKHTTKTKSTKSAVALAVAAMMFAAGTASASFVDTSFVAD NPFVFQQAKKSFETAEYQKNWGLSAMKASSAYALGYHGQGVKVGMMDSGFLTTHQELSGD RWHTVKAEGNYSQSGERYPQYAYGSKPKDPVKYNKGDKFSVDGAYNPDFNDNHGTGCAGV YAGNRDGVGMHGVAWGSEFYSANTGGTDDTNYGPFPDYNFFKAGYDALVASGVKIINNSF GTNLKQVDENGNILDYYHSGPELTTVNDIEYEYFLFKKQYNNNDADPELKGKSFVDAAWD AVKDKDVIQVFTNGNNDRANPYHRALYPYFNPEAEAQWIAIAGLRQMDKNTDPDNYKLEA NFNEAGYAKYWTLSGPGQNGYTANKAGNNVYGSYSGTSMAAPFISGAFGVLASRYQDMSA VQVREVLLTTANHKNADGSDMIGWANADGKTPAEGEVSDRMGWGVPDLEKGMYGLGQFLG HFDYNLKKGHTDVWSNNITQVALEQREREDIAWLKSALKNADQFKFDGSERIDLSKLKFN ISNDPADYKLTNTSTGEANKDGKEHNYDLAGIKDKNISLEDAKKWRLEYYTKRAEAIINK INGGLYDGSLTKSGEGTLVLTGDNDYDGKTTVAGGTLLAFSESIGTDHTVTVGDKGTFGV LSAYNDTFTQKGLLNSQNKDEDKLNIVIKDGGTLYIDGASDVKVQGVTFEGAKNVKFGLA GADHNKLIQVYNGEGSSVAGSFASDSALALEQSDLKKGEDFVDSLFFTVDSATLSTDKKK IEVSMKRDEGVTFQSFANGANQNSIASAIAASGNTLMGELLAASDKSQLEYVYSTLDDDF YVTARNALVTNATQVTRAVIDQASGMGEGRRAEFDEGRAHVWATGMGRWGEADGNAHSLD VDFTVGMVGAEFNVCQATKLGAFFGYGDTDYSGAQGKIDGEDKHFGIYGLTDIGNISMTY GIAYTDEDRDTTRHLGGVATSHSENASVLQGFVEGAYNFDLGVAKVSPYVGFTWARVETD DVVDGALDHNFKTEGVKDDIQIATIGARTSMPFTMGTMPVAVKADLGYSHFFGDSDGVAR VQMGEGGQFATIEGSDLKGQVNFGLGIVGKVAKHATVGVSYTGAWGSDVDSHGIMGNLRI NF >gi|319805114|gb|ADMF01000017.1| GENE 46 49609 - 50040 374 143 aa, chain - ## HITS:1 COG:no KEGG:Ppha_0277 NR:ns ## KEGG: Ppha_0277 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 142 428 568 570 150 52.0 1e-35 VSNEIKDPFDALKAYRSREKIEELFATYKDSFDGRKPRTWYPENLYGRQFAQFVGLGYHC FLAKRILDVKKALSEKETEGKTKEELSLEAKLLAWLNQHSLIQILDWFRCVDYVAATGNA SASKWTTETTRRDQLFLKMLGVK Prediction of potential genes in microbial genomes Time: Sun May 29 19:37:36 2011 Seq name: gi|319805017|gb|ADMF01000018.1| Sutterella wadsworthensis 3_1_45B cont1.18, whole genome shotgun sequence Length of sequence - 129993 bp Number of predicted genes - 102, with homology - 90 Number of transcription units - 64, operones - 26 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 333 145 ## Ppha_1041 transposase IS4 family protein - Prom 354 - 413 3.6 + Prom 315 - 374 3.4 2 2 Tu 1 . + CDS 471 - 1790 1274 ## COG1178 ABC-type Fe3+ transport system, permease component + Term 1814 - 1860 10.2 3 3 Tu 1 . - CDS 1881 - 2486 654 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 2545 - 2604 2.2 4 4 Tu 1 . + CDS 2683 - 4152 559 ## PROTEIN SUPPORTED gi|225093729|ref|YP_002662469.1| ribosomal protein S15 + Term 4282 - 4323 -0.6 - Term 4148 - 4190 3.0 5 5 Tu 1 . - CDS 4327 - 4791 -96 ## - Prom 4944 - 5003 3.1 6 6 Op 1 3/0.067 + CDS 5111 - 5779 1260 ## COG0526 Thiol-disulfide isomerase and thioredoxins 7 6 Op 2 . + CDS 5798 - 6448 788 ## COG1495 Disulfide bond formation protein DsbB + Term 6497 - 6535 7.0 - Term 6539 - 6581 6.1 8 7 Tu 1 . - CDS 6618 - 7406 749 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 7637 - 7696 2.6 9 8 Tu 1 . + CDS 7740 - 9143 1665 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 9175 - 9217 12.5 + Prom 9210 - 9269 2.5 10 9 Op 1 . + CDS 9394 - 12021 3366 ## COG0013 Alanyl-tRNA synthetase 11 9 Op 2 . + CDS 12021 - 12287 154 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 12323 - 12374 8.2 + TRNA 12484 - 12560 87.5 # Arg ACG 0 0 + TRNA 12622 - 12698 87.5 # Arg ACG 0 0 - Term 13011 - 13054 5.9 12 10 Op 1 16/0.000 - CDS 13082 - 13591 414 ## COG0262 Dihydrofolate reductase 13 10 Op 2 . - CDS 13631 - 14431 793 ## COG0207 Thymidylate synthase - Prom 14497 - 14556 2.8 - Term 14566 - 14606 6.1 14 11 Tu 1 . - CDS 14682 - 16511 2612 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 16666 - 16725 2.9 15 12 Tu 1 . + CDS 16447 - 16581 76 ## + Term 16766 - 16811 4.2 - Term 16706 - 16752 -0.3 16 13 Op 1 . - CDS 16806 - 17333 637 ## 17 13 Op 2 . - CDS 17479 - 17886 192 ## COG5319 Uncharacterized protein conserved in bacteria - Prom 18096 - 18155 80.3 18 14 Tu 1 . + CDS 17885 - 18073 124 ## + Term 18103 - 18169 30.0 + TRNA 18065 - 18155 63.2 # Ser GGA 0 0 + Prom 18500 - 18559 3.7 19 15 Tu 1 . + CDS 18788 - 19765 227 ## COG3177 Uncharacterized conserved protein + Term 19829 - 19862 4.1 20 16 Tu 1 . + CDS 19965 - 20189 108 ## + TRNA 20424 - 20498 61.0 # Gly CCC 0 0 + Prom 20426 - 20485 77.9 21 17 Op 1 . + CDS 20577 - 21317 1010 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 21346 - 21388 7.7 + Prom 21497 - 21556 2.8 22 17 Op 2 31/0.000 + CDS 21668 - 22423 1131 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 22430 - 22476 2.2 + Prom 22489 - 22548 3.3 23 17 Op 3 . + CDS 22629 - 23294 991 ## COG0765 ABC-type amino acid transport system, permease component + Prom 23328 - 23387 5.5 24 18 Op 1 26/0.000 + CDS 23449 - 23712 342 ## PROTEIN SUPPORTED gi|149927536|ref|ZP_01915790.1| 30S ribosomal protein S15 25 18 Op 2 . + CDS 23979 - 26102 1954 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Prom 26244 - 26303 4.6 26 19 Op 1 9/0.000 + CDS 26375 - 27112 802 ## COG0149 Triosephosphate isomerase 27 19 Op 2 . + CDS 27167 - 27526 381 ## COG1314 Preprotein translocase subunit SecG + Term 27711 - 27777 31.6 + TRNA 27596 - 27680 57.0 # Leu GAG 0 0 + TRNA 27686 - 27763 71.8 # Gln CTG 0 0 + TRNA 27807 - 27891 57.0 # Leu GAG 0 0 + TRNA 27900 - 27977 71.8 # Gln CTG 0 0 - Term 27979 - 28014 6.0 28 20 Tu 1 . - CDS 28230 - 29192 1254 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Prom 29498 - 29557 1.7 29 21 Op 1 . + CDS 29704 - 33801 3787 ## Ent638_0501 outer membrane autotransporter 30 21 Op 2 . + CDS 33888 - 34454 332 ## 31 22 Tu 1 . - CDS 34466 - 36106 245 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 36203 - 36245 9.1 32 23 Tu 1 . - CDS 36270 - 37691 1851 ## COG1055 Na+/H+ antiporter NhaD and related arsenite permeases - Prom 37862 - 37921 1.8 - Term 37920 - 37973 14.8 33 24 Tu 1 . - CDS 38145 - 39341 1781 ## COG3203 Outer membrane protein (porin) - Prom 39523 - 39582 6.0 + Prom 39545 - 39604 5.2 34 25 Tu 1 . + CDS 39714 - 40229 552 ## gi|238796288|ref|ZP_04639798.1| Transcriptional regulator + Term 40239 - 40281 4.4 - Term 40227 - 40269 11.4 35 26 Tu 1 . - CDS 40306 - 41508 1125 ## COG1488 Nicotinic acid phosphoribosyltransferase + Prom 41610 - 41669 4.5 36 27 Tu 1 . + CDS 41786 - 42409 697 ## COG2860 Predicted membrane protein - Term 42399 - 42447 12.3 37 28 Op 1 . - CDS 42479 - 43885 1939 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 38 28 Op 2 . - CDS 44117 - 45169 998 ## COG1472 Beta-glucosidase-related glycosidases - Term 45182 - 45225 8.2 39 29 Op 1 9/0.000 - CDS 45266 - 46042 1083 ## COG0854 Pyridoxal phosphate biosynthesis protein - Prom 46082 - 46141 2.6 40 29 Op 2 16/0.000 - CDS 46196 - 47251 756 ## COG1381 Recombinational DNA repair protein (RecF pathway) 41 29 Op 3 18/0.000 - CDS 47337 - 48419 1375 ## COG1159 GTPase 42 29 Op 4 13/0.000 - CDS 48416 - 49096 718 ## COG0571 dsRNA-specific ribonuclease 43 29 Op 5 14/0.000 - CDS 49152 - 50042 1053 ## COG0681 Signal peptidase I 44 29 Op 6 . - CDS 50148 - 51941 2154 ## COG0481 Membrane GTPase LepA - Term 52255 - 52300 4.0 45 30 Tu 1 . - CDS 52354 - 53595 1323 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase - Prom 53741 - 53800 4.9 - Term 53794 - 53827 6.1 46 31 Op 1 22/0.000 - CDS 53924 - 54163 462 ## COG0236 Acyl carrier protein - Prom 54212 - 54271 1.9 47 31 Op 2 26/0.000 - CDS 54290 - 55057 230 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 48 31 Op 3 14/0.000 - CDS 55099 - 56031 934 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 49 31 Op 4 4/0.067 - CDS 56095 - 57090 914 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III - Prom 57119 - 57178 4.1 - Term 57234 - 57273 7.5 50 32 Tu 1 . - CDS 57440 - 57622 239 ## PROTEIN SUPPORTED gi|187477616|ref|YP_785640.1| 50S ribosomal protein L32 - Prom 57740 - 57799 4.2 51 33 Tu 1 . + CDS 57774 - 57953 63 ## - TRNA 57854 - 57929 89.0 # Gly GCC 0 0 - TRNA 57976 - 58051 89.0 # Gly GCC 0 0 - TRNA 58087 - 58162 89.0 # Gly GCC 0 0 - Term 58300 - 58346 8.3 52 34 Tu 1 . - CDS 58362 - 59714 466 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 53 35 Tu 1 . + CDS 59713 - 60084 165 ## + Term 60198 - 60236 2.1 - TRNA 60233 - 60321 70.8 # Leu TAA 0 0 - TRNA 60372 - 60447 89.0 # Gly GCC 0 0 - TRNA 60459 - 60532 65.7 # Cys GCA 0 0 - TRNA 60538 - 60613 89.0 # Gly GCC 0 0 - Term 60714 - 60759 11.4 54 36 Op 1 . - CDS 60789 - 62141 1937 ## COG2704 Anaerobic C4-dicarboxylate transporter 55 36 Op 2 . - CDS 62355 - 63752 1629 ## COG1027 Aspartate ammonia-lyase - Prom 63841 - 63900 2.0 56 37 Op 1 36/0.000 - CDS 63960 - 64811 1110 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 57 37 Op 2 . - CDS 64831 - 66816 2828 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 58 38 Tu 1 . - CDS 67876 - 67968 58 ## - Prom 68153 - 68212 1.7 + Prom 67909 - 67968 2.4 59 39 Op 1 1/0.200 + CDS 68022 - 68414 597 ## COG0251 Putative translation initiation inhibitor, yjgF family 60 39 Op 2 1/0.200 + CDS 68435 - 70567 1996 ## COG1200 RecG-like helicase 61 39 Op 3 . + CDS 70618 - 71562 1008 ## COG0583 Transcriptional regulator 62 39 Op 4 . + CDS 71601 - 72830 1263 ## COG0628 Predicted permease 63 40 Tu 1 . - CDS 72890 - 74254 1357 ## COG1760 L-serine deaminase - Prom 74357 - 74416 3.1 - Term 74428 - 74456 -0.3 64 41 Tu 1 . - CDS 74492 - 75760 1751 ## COG3069 C4-dicarboxylate transporter - Prom 75808 - 75867 6.9 65 42 Tu 1 . - CDS 75900 - 76484 580 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) + Prom 76444 - 76503 3.6 66 43 Op 1 1/0.200 + CDS 76712 - 78304 1198 ## COG0501 Zn-dependent protease with chaperone function 67 43 Op 2 . + CDS 78297 - 79244 865 ## COG1162 Predicted GTPases + Prom 79304 - 79363 2.4 68 44 Tu 1 . + CDS 79406 - 80575 1047 ## COG2896 Molybdenum cofactor biosynthesis enzyme + Prom 80584 - 80643 3.1 69 45 Tu 1 . + CDS 80858 - 82348 1906 ## COG0591 Na+/proline symporter + Term 82394 - 82429 6.5 + Prom 82436 - 82495 4.7 70 46 Tu 1 . + CDS 82639 - 84243 2072 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 84276 - 84320 10.5 + Prom 84324 - 84383 4.1 71 47 Tu 1 . + CDS 84439 - 85698 1351 ## 72 48 Tu 1 . - CDS 85913 - 87406 1570 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 87429 - 87488 2.8 - Term 87491 - 87529 0.2 73 49 Op 1 8/0.000 - CDS 87533 - 88198 649 ## COG4566 Response regulator 74 49 Op 2 . - CDS 88179 - 90152 1015 ## COG0642 Signal transduction histidine kinase - Prom 90274 - 90333 2.0 75 50 Tu 1 . + CDS 90334 - 91920 1001 ## COG2272 Carboxylesterase type B + Term 92008 - 92051 6.1 - Term 91997 - 92036 9.1 76 51 Op 1 . - CDS 92079 - 92945 966 ## - Prom 93027 - 93086 3.0 - Term 93078 - 93125 1.3 77 51 Op 2 . - CDS 93241 - 95859 1774 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 95954 - 96013 2.1 - Term 95959 - 95998 8.1 78 52 Op 1 21/0.000 - CDS 96047 - 96508 452 ## COG0314 Molybdopterin converting factor, large subunit 79 52 Op 2 2/0.067 - CDS 96510 - 96767 373 ## COG1977 Molybdopterin converting factor, small subunit 80 52 Op 3 4/0.067 - CDS 96810 - 98015 1402 ## COG0303 Molybdopterin biosynthesis enzyme - Term 98027 - 98071 1.1 81 53 Op 1 . - CDS 98088 - 98612 362 ## COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein 82 53 Op 2 . - CDS 98639 - 100069 1277 ## COG0498 Threonine synthase - Prom 100166 - 100225 2.7 + Prom 100314 - 100373 6.2 83 54 Op 1 . + CDS 100466 - 102388 1555 ## COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH + Prom 102413 - 102472 3.3 84 54 Op 2 . + CDS 102527 - 103312 942 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 103341 - 103385 11.1 - Term 103211 - 103246 1.2 85 55 Op 1 . - CDS 103465 - 104700 758 ## COG0477 Permeases of the major facilitator superfamily 86 55 Op 2 . - CDS 104750 - 106243 1143 ## COG0165 Argininosuccinate lyase - Prom 106267 - 106326 2.1 87 56 Op 1 . - CDS 106387 - 107598 905 ## COG3203 Outer membrane protein (porin) 88 56 Op 2 . - CDS 107629 - 109014 1196 ## Amet_1883 amidohydrolase 89 56 Op 3 . - CDS 109045 - 110328 1261 ## COG3069 C4-dicarboxylate transporter - Prom 110415 - 110474 1.7 + Prom 110475 - 110534 5.4 90 57 Tu 1 . + CDS 110628 - 111584 535 ## COG0583 Transcriptional regulator 91 58 Op 1 13/0.000 - CDS 111756 - 113972 1338 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 92 58 Op 2 8/0.000 - CDS 113984 - 117559 2066 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 93 58 Op 3 . - CDS 117568 - 121248 3132 ## COG1330 Exonuclease V gamma subunit - Term 121373 - 121404 1.1 94 59 Op 1 . - CDS 121476 - 121985 660 ## COG2839 Uncharacterized protein conserved in bacteria 95 59 Op 2 16/0.000 - CDS 122033 - 123430 1617 ## COG0305 Replicative DNA helicase - Term 123550 - 123601 11.5 96 60 Op 1 27/0.000 - CDS 123648 - 124097 471 ## PROTEIN SUPPORTED gi|221068652|ref|ZP_03544757.1| ribosomal protein L9 97 60 Op 2 . - CDS 124117 - 124389 366 ## PROTEIN SUPPORTED gi|163857367|ref|YP_001631665.1| 30S ribosomal protein S18 - Prom 124624 - 124683 3.2 98 61 Tu 1 . + CDS 124394 - 124681 200 ## + Term 124780 - 124833 6.0 99 62 Tu 1 1/0.200 - CDS 124724 - 125110 471 ## PROTEIN SUPPORTED gi|17546026|ref|NP_519428.1| 30S ribosomal protein S6 - Prom 125171 - 125230 5.4 - Term 125158 - 125201 8.1 100 63 Op 1 7/0.000 - CDS 125251 - 126222 362 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 101 63 Op 2 . - CDS 126277 - 128637 674 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Prom 128858 - 128917 80.3 + TRNA 128830 - 128916 77.6 # Leu CAG 0 0 - Term 128911 - 128942 1.1 102 64 Tu 1 . - CDS 129038 - 129931 744 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein Predicted protein(s) >gi|319805017|gb|ADMF01000018.1| GENE 1 3 - 333 145 110 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 109 1 107 570 127 57.0 2e-28 MGRPLTGKTHVGIRRETRSNGDVYVYERVTGYDPKTQKTKTLSTRLLGKILAGSTEMIPT RPKKKRSEVIEAPVQAVRTHVGLQKILEWAGHESGIDADLQRSFEIGDAL >gi|319805017|gb|ADMF01000018.1| GENE 2 471 - 1790 1274 439 aa, chain + ## HITS:1 COG:mll3625 KEGG:ns NR:ns ## COG: mll3625 COG1178 # Protein_GI_number: 13473127 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Mesorhizobium loti # 12 429 136 554 567 132 28.0 1e-30 MQKRGLLEQLLPPAGAVTPAFFSLGGLVFVMSLHALPFMTTIMKNALIRVPGNLEEAAAV SGAGFSKRLKQVLLPLVTGNYAIAMLLVFVKTLAEYGTPSTLGRRIGFDVFTTKIHAYAT TAPVNFGAAATLSLILITICMAMWMLQSWITANRSFRLVGAKGARPAYWKLSGWPRRAAA LYIGIVLLLAVGVPWFSVIATSLIKIRGYGLALGNFTLMHYVELFTENPKGLDAFVTSLM LALSVGLIASFLGTVIVWLIRHSGRMGRLLEGIGLLPEMLPSIVMAIGLMLFWNQIYTWI PLYNTMGFMVLVYVILFLPYAIQYTTSAWMQVSPSLREAGSVCGGSPFFVLTRITLPLIA VGIVQGFIMIFIIVLRELVAASLISPPDVLVISTFIVNEFEQGSASVAMAMALICVLVSA IMLFALRMLLSRMKHISAV >gi|319805017|gb|ADMF01000018.1| GENE 3 1881 - 2486 654 201 aa, chain - ## HITS:1 COG:RSc2047 KEGG:ns NR:ns ## COG: RSc2047 COG0494 # Protein_GI_number: 17546766 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Ralstonia solanacearum # 8 191 7 193 205 160 45.0 2e-39 MSRIPLIQLPAPRAERPNDPLEEKTFKEEVLFNSSFVKMVRDDIKLPDGGLSKRLYLTHG GACAMVALGDDGTILLERQWRHPLKRSFWELPAGKIDPNEEEIACAKRELIEECGVKAQE WTKLGVINNAIGYSNEHIAIYLARGLTEVEQKLDEGEFLEVYRVPFGEAWEMAVDGRITD VKTISGIFWLKAWFERNGLEP >gi|319805017|gb|ADMF01000018.1| GENE 4 2683 - 4152 559 489 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225093729|ref|YP_002662469.1| ribosomal protein S15 [gamma proteobacterium HTCC5015] # 1 469 3 487 497 219 33 4e-56 KMSRTIMNLEESRELEARCAVRMGLDTLMRRAGTFAAKWLDERLPCPHVTVLAGPGNNGG DAIVCACELKRLGHTVQLVMPGGEPKTELAREMLADWIALGGTVISDPYMTEKADAVVDG LFGTGLKRPITGDYLDAILWFNERQCFRLALDVPSGLHSETGHWVGTMPGVTADATVTFL SAKSGLYMNEGVDAAGAVVVSELDVSVPLTRLGLIEYSDFDHICQPRPKFSHKGTFGHVA VVGGAEGHIGAALLSARAALRMGAGTVTVELLTPNAMMVDPVAPELMFSSTPLDFSRFTA AVIGPGLGQSAAAKARLEAALASNIPLVLDADALNLIAGDKALLTTLLHRTVATVLTPHE AEGARLLKVTPQIIQSDRVNAVRDIALQTGAITVLKGPGTLIAMRSSRTWLSPYATASLA TAGSGDVLSGMIASFLGQRYDTVESVLGAVMLHGYAGKERVAGLTASEIASIAVEPLETY RRTNARPYW >gi|319805017|gb|ADMF01000018.1| GENE 5 4327 - 4791 -96 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTLGGGSRRVWGCLQEWLAISSEPVFTHPQTKKSLAGVFPSPARLNPQFSQPKVRRNYS GNLFSHQNSAVRKLYLENTSAGFTECSRGATKGDASFDMLMTAANEGRRLFAAKDCSAAG RCRVTGFQRPFEQQKKPRRRFPVAREVQPSIFST >gi|319805017|gb|ADMF01000018.1| GENE 6 5111 - 5779 1260 222 aa, chain + ## HITS:1 COG:STM3193 KEGG:ns NR:ns ## COG: STM3193 COG0526 # Protein_GI_number: 16766493 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Salmonella typhimurium LT2 # 5 222 8 222 223 194 52.0 1e-49 MLRRTFIASAVLFATAAAAPAAFAFTEGKDADYITLEKPLPGGEGKLVKVWSYDCPFCFK FDVGVDPKMVPLAEKATGLKFDMVHIETKGKYGRAGSELFAWCQLRDKAAGITDWEDPKS IFKKAKDAIYKAYHRQGERWASGEAAFLKTGLDAIGATAEEFEAARKTPEVQQLADSWKP SYDVAKIQGIPAYVVNGKYLIMTKSIRSVQGLVDLITELSKK >gi|319805017|gb|ADMF01000018.1| GENE 7 5798 - 6448 788 216 aa, chain + ## HITS:1 COG:STM3194 KEGG:ns NR:ns ## COG: STM3194 COG1495 # Protein_GI_number: 16766494 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Salmonella typhimurium LT2 # 5 202 16 213 225 204 46.0 8e-53 MNTLLDRIGLFSQTRWPWLVIAILSAGLVLIAHNVFQVWLYMKPCEQCVYIRFAFLCMTF GCLFTLAWPKALIMRIIAYVCGVYGCIYGIMCSVKLSSIHHAIHSEDLDALFGMQGCSLE PHYPFGLPLEKWAPDWFLPTGDCGYDNSDVPLGTVLSPLQESIIQMYSDAGGWYLIPSMK FMSMAQCCLLGFAVALLIYVILFVGDMKHTFGKPAA >gi|319805017|gb|ADMF01000018.1| GENE 8 6618 - 7406 749 262 aa, chain - ## HITS:1 COG:NMA2107 KEGG:ns NR:ns ## COG: NMA2107 COG0664 # Protein_GI_number: 15794981 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Neisseria meningitidis Z2491 # 16 255 1 239 244 258 54.0 1e-68 MTPQDRTTHQDEEEVVALNNPAMLLRSTCSNCNLRESCLPTGLTLKEIERLEELVTGNRR RIKRGESLFRAGDRFDTLYAVRLGFLKSTVMSSDGREQVTNFFMAGEMIGFDGISSGVHS CDVTALEDTEVCVINYDKFEEAATSMRSMGAHVLKMLSREIVRQHGVMLLLGSMHAEERL AAFLLSLSQRFEQRGYSRSEFVLRMTRAEIGSYLGLKLETVSRVLSRFSHDGLIEVNQKH VRIFDAEGLRAIVSGVPLSEQR >gi|319805017|gb|ADMF01000018.1| GENE 9 7740 - 9143 1665 467 aa, chain + ## HITS:1 COG:NMA2108 KEGG:ns NR:ns ## COG: NMA2108 COG0635 # Protein_GI_number: 15794982 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis Z2491 # 1 465 6 471 473 489 52.0 1e-138 MTNSETSGVELPDMDLLKKFDVPAPRYTSYPTADRFNAEFTAEDYARALAGRGTAKEPAP LSLYVHVPFCNDVCFYCGCNKIVTRDHSRSAAYIDLIGQEADLVKAHLTGSQELEQLHFG GGTPTFLTEDELELMMDTLTKRFPLAKTGGEFSIEVDPRTCGPSKVKKLREIGLNRMSLG VQDFNPDVQKAVNRIQPFEMTKETMDAARAEGFHSINMDLIYGLPKQTRETFAQTIDQVL ELSPDRIALYHYAHLPNHFKPQRRILPADLPDTVTKVHIMFDAIKRLTANGYRYIGMDHF AKIDDELSRAQIEGTLQRNFQGYSTKAECDMVALGVSSISKIGSAYACNPRELDDWAAAI KEGRLATNRGYHLNEDDELRRYVIMKIMCNFELKKKDVEDKFGIHFDEVFAYELGKMKPY VHHDLVELYPDRLVVLPKGKIFVRAVAMQFDRYLRESNRAGGYSRIA >gi|319805017|gb|ADMF01000018.1| GENE 10 9394 - 12021 3366 875 aa, chain + ## HITS:1 COG:RSc0797 KEGG:ns NR:ns ## COG: RSc0797 COG0013 # Protein_GI_number: 17545516 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 875 1 884 884 1012 58.0 0 MKVADIRRTFLKFYESKGHTIVASSPVVPGNDPTLLFTNAGMNQFKDVYLGFDHRPYKRA TTSQKCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKDAIHFAWELLTEHFHLP PEKLWVTVYAEDQEAYDIWHKEVGIPADRIVRIGDNKGARYMSDNFWMMGDTGPCGPCSE IFYDHGPSVQGGPPGSPEEDGDRYMEIWNLVFMQFYRDEKGEMHKLPRPSIDTGMGLERI ATVLQGVHSNYDIDLFKNLLAAAKAAVESVSTVPADINSPSLKVIADHIRACAFCVADGV VPGNEGRAYVLRRICRRALRHGYKLGARGPFFYKLVDAVRKEMGEAYPELMNHEIEKVIE AEERRFLQTLSKGMDILDAAIAENKTGVLPGDVVFKLHDTYGFPADLTADVCRERGISVN TAEFDAAMERQRAAARASAKFKMAQGLDYTGADTVFTGYETLTEKDAEVVALYANGEPVD RVEAGSECVVVFNRTPFYAESGGQVGDQGEAKNATAILKVLDTFRVKAAVTGLQCHVAEG HVAVGDKFDLAVDEARREATARNHSVTHLMHFALRTVLGDKVAQKGSLVTPESTRFDFSY GKPVTAEQIAEVERIVNAQILKNTPVQTRVLPIEEAKKTGAVMLFGERYGEVVRVLDIGK STEFCGGTHVKATGDIGFFKVVSESGIAAGVRRIEAVTGMNALSWVQNTESLLAATAREF KAPVSEVPVKAADAIATIRTLEKGIDQLKSQMAAKAGDALIAEACDVKGVKVLLARLDGA DAKALRETMDKVKDKLGSAVAVLASVTGEDRVQLAAGVTKDLTGRVKAGELAGFVAGLLG GKGGGKPDLAMAGGSDVKKLPEALEAARAWIEGKL >gi|319805017|gb|ADMF01000018.1| GENE 11 12021 - 12287 154 88 aa, chain + ## HITS:1 COG:NMA0882 KEGG:ns NR:ns ## COG: NMA0882 COG0425 # Protein_GI_number: 15793851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Neisseria meningitidis Z2491 # 12 72 4 64 74 70 57.0 7e-13 MTNVHNEPQSVETLRLPGLSCPMPVLRAKKALAKMTPGAVLAVWSTDPHSTPDLSDFCRQ TGHGLLKQEEVDDDGRHWFVSEIQRRAD >gi|319805017|gb|ADMF01000018.1| GENE 12 13082 - 13591 414 169 aa, chain - ## HITS:1 COG:RSc0946 KEGG:ns NR:ns ## COG: RSc0946 COG0262 # Protein_GI_number: 17545665 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Ralstonia solanacearum # 1 133 3 129 167 121 45.0 5e-28 MIELIAAAARTGVIGAENKLLWRIPEDFAFFKKTTMGSPVVMGSRTWASIGRALPGRLNV IVSRRLQPADISAKNVVVVKSLNEALSLAQARSRTGRVFVIGGGEIYRRTIAIADRVWLT KIDHDFEGNTYFPTIPRGRFRGECFRTLLPSAKRPWRVDFECWTKRSGA >gi|319805017|gb|ADMF01000018.1| GENE 13 13631 - 14431 793 266 aa, chain - ## HITS:1 COG:ECs3684 KEGG:ns NR:ns ## COG: ECs3684 COG0207 # Protein_GI_number: 15832938 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Escherichia coli O157:H7 # 5 266 3 264 264 436 73.0 1e-122 MSSNQYETLLKDIYERGAHKSDRTGTGTRSLFGCQMRFPLADGFPLVTTKKLHLRSIIYE LLWFLSGSTNIKYLHDHKVTIWDEWADENGELGPVYGRQWRAWPTSDGRTIDQISEVLER IKKNPDSRRLLVTAWNPAEVDKMALPPCHCLFQFYVADGRLSCQLYQRSCDMFLGVPFNI ASYALLTHMVAQQCDLEPGDFVWTGGDCHIYDNHLEQTALQLSREPRPYPKLVIKRRPAS LFEYEYEDFEFEGYDPWPGIKAPVAV >gi|319805017|gb|ADMF01000018.1| GENE 14 14682 - 16511 2612 609 aa, chain - ## HITS:1 COG:CAC1669 KEGG:ns NR:ns ## COG: CAC1669 COG1966 # Protein_GI_number: 15894946 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Clostridium acetobutylicum # 7 586 1 578 592 548 52.0 1e-155 MESLNGVNAITIVFAALCIFAIAYRFYGLWVAQKVLNINAARETPANRFEDGKDYVPTNK YVLFGHHFAAIAAAGPLLGPVLAAQFGYLPGLLWILIGCVLAGGVHDMVVLFCSVRHRGK SLAYIASQEIDTTTGRVAAWAVLAILLLTLAGLSIAVVNAMHNSLWSTYTVFCTIPIAVL MGLYMQVWRKGDVRGATIMGVVLLFLCILSGPWVASHPEYFGWLDIDKPEMSLIIPAYGF LASVLPVWLLLLPRDYLSTFLKIGTIGALAIGIAFVMPTFHMPAITEFIHGGGPIIGGPV IPFLFITIACGALSGFHATIGTGTTPKMINNEKDVLFVGYGAMLMEGFVAVMALVAACVL VPADYFAINAPAEKFAKLGMDVVELPTLEAEVQENLMHRPGGSVSLAVGMAHIFSKIPAM ESLMAYWYHFAIMFEAVFILTAVDAGTRVGRFFLQEMVGKVWPRFADKDWWPGIIITSAV FTGAWGYLVYSGDIGSIWPLFGICNQLLASVTLLIGTTVIIRMNHVKYAWTTGAPGILMT FITFWAGIWLIINQYLPSGQYLLAFLSALVMCLMLFVIVGVLRRWMVLLNIHTTVKDKYG VEVKTIVEE >gi|319805017|gb|ADMF01000018.1| GENE 15 16447 - 16581 76 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKMHSAANTMVIAFTPFSDSMTIFLKWVDDALELPWILMSLKT >gi|319805017|gb|ADMF01000018.1| GENE 16 16806 - 17333 637 175 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEQFPAAKETQPHGPADLTDQSTVFLMLEELGIASMQRDWLEANAPESDDCKDAAEQAEE FFDDIANLFLGQGGDDRVAPNGWAGSALTKNLREAVCAYAGHDVFENVDDETVVRRTLDA YLTSLKLLTQQQEELARSGTKMSPAEYITLMIAWSGVFSGSRKSLELSAPYRPTF >gi|319805017|gb|ADMF01000018.1| GENE 17 17479 - 17886 192 135 aa, chain - ## HITS:1 COG:RSc2046 KEGG:ns NR:ns ## COG: RSc2046 COG5319 # Protein_GI_number: 17546765 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 3 126 1 142 153 69 34.0 1e-12 MSLKIFDYRCENHHVFEAWLRSEVDAGPSACPVCGSLVLSRLPSAPAVRAAEASASPQSA APAASLSDLLTALRHAAMKARDVGEDFPETVRAMASGAAACESVRGKCTPREEAELRAEG IDVLALPKDWFEPMN >gi|319805017|gb|ADMF01000018.1| GENE 18 17885 - 18073 124 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLISSENTRREISTFAVFFIQSLVTNLSFFGIFLLLGFGYLPNLQKSLHHGAAAHSRAHH AS >gi|319805017|gb|ADMF01000018.1| GENE 19 18788 - 19765 227 325 aa, chain + ## HITS:1 COG:SMa2105 KEGG:ns NR:ns ## COG: SMa2105 COG3177 # Protein_GI_number: 16263601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 1 318 85 395 406 258 42.0 1e-68 MYVRREALFSSQIEGTQATLDDILDPTIDRNANRDVTEVIDNVEAIFFAVEQMKDSNPKG LPLCMRLLRETHQVLLTHSRGRDKNPGEFRSSQNWIGPTGCSLTSASYVPPNLEDMHQAL SDLEKFFHQEPPRLDPFINAALIHYQFETIHPFLDGNGRIGRLLILLYLIHAKVLTSPLL YISYFLKLHRGDYYAHMMAVRQDGNYEAWIKFFLIAASAALTDTISSIQKLRDLHDNDSQ TVVNATTRKSTQQRLLNFLEYLEHKPIIEIKTTAQQLKLSFPTASKLILRFVELGILQET TGKHRSRVFAYENYLAILRKDGEPL >gi|319805017|gb|ADMF01000018.1| GENE 20 19965 - 20189 108 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLPVPWALPRTRLQTLFASVKTKNLPREHAGAIVPDRTEMLELKNIRFNAALGEMTAVE FADHLRIAFGAITH >gi|319805017|gb|ADMF01000018.1| GENE 21 20577 - 21317 1010 246 aa, chain + ## HITS:1 COG:PA1816 KEGG:ns NR:ns ## COG: PA1816 COG0847 # Protein_GI_number: 15597013 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Pseudomonas aeruginosa # 6 236 2 243 246 214 44.0 8e-56 MASPNRLITLDTETTGLDAQNGDRIIEIGCVAIEGRMMRSTDEHHLQIFVNPEREVPEEA VAIHGITTEYLQDKPKFAEIADKFIDFVKGSTLVIHNAAFDTGFLDMELGRCGRGKISDY CQVIDTVKLAKKLLPGRAVSLDSLCRYYEIDNSNRTLHGALLDAELLAEVYLSLSRGQDT LTLVNEDIDNLPPMPAFDASIVIKASPEELAEHERILDIAEKKAKATPAWRKTAEPAEKS DAAASA >gi|319805017|gb|ADMF01000018.1| GENE 22 21668 - 22423 1131 251 aa, chain + ## HITS:1 COG:sll1270_1 KEGG:ns NR:ns ## COG: sll1270_1 COG0834 # Protein_GI_number: 16330176 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Synechocystis # 25 251 40 267 275 155 36.0 8e-38 MQFKKIVLCACAAATLAIGSAAAQARDLLRVGTEPTFAPFEFLDTQTKDYTGFDMDLIRA VGQKAGFDVQILNMGFDALIPALMTGNVDVVAAGVSITPERQKRVDFTTPYYTSGLSMLI HRTDAEKFKTFDDLKNQRLAVQIGTTGADKAKDIQGAKVSSFNTTSEAFMDLLSHNASAV VLDRPVLAYYLKNQPKAAQQLTIPPYIADAEEFGFCVKKGNTALLDKLNKAYAELKASGE VDKIYKKWFQE >gi|319805017|gb|ADMF01000018.1| GENE 23 22629 - 23294 991 221 aa, chain + ## HITS:1 COG:TM0592 KEGG:ns NR:ns ## COG: TM0592 COG0765 # Protein_GI_number: 15643358 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Thermotoga maritima # 5 216 5 215 216 200 50.0 2e-51 MEFDFSLIIHSIPLLLRGAGLTLEITALAVGLGLLIGLVASLAQLSKSPLLRLPAKVYVD CIRGTPLLIQIFIIYFALPNIIGHRIDPFIAAVTACSLNSGAYIAEIFRGGIQSISQGQF RAGLSLGMTYGQTMRYIVLPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRSGQLII AETYGTLEIWTCVAIIYLTLTLTISRFVAALEKRFRKSDDR >gi|319805017|gb|ADMF01000018.1| GENE 24 23449 - 23712 342 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149927536|ref|ZP_01915790.1| 30S ribosomal protein S15 [Limnobacter sp. MED105] # 1 87 1 87 87 136 77 6e-31 MSELTKSEIVAKFQRAEGDTGSPEVQVALLTARINHLTEHFKVHAKDHHSRRGLLRMVSR RRKLLDYLKRTDLNAYRKLIDTLSLRK >gi|319805017|gb|ADMF01000018.1| GENE 25 23979 - 26102 1954 707 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 3 705 1 700 714 757 57 0.0 MTMFNKTTQSFRFGDHDVTLETGEIARQATGAVICRMDDTVVLATVVCKKEAKPGQDFFP LTVDYIEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPDGFFNEVQVIIHVL SADPAVDPDIPAMLGASAALAVSGIPFRGPIGACRVGYIDDKFVVNPTTEQLKTSRLDLV VAGTQRAVLMVESEADILPEKTMLDAVVFGHREMQVAINAINELVAKAGKPAWDWQPAPK NEALIARIVEIADKGLHEAYAIRSKQPRTEKLREVYALVEQTLAADAEAAGTEAPDANEV NGILFELEAHLVRSQILAGEPRIDGRDTRTVRPIEIRQGVLPRTHGSALFTRGETQALVT TTLGTKQDEQIIDGLCEEQHDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALKA VLPSPEEFQYTLRVVSEICESNGSSSMASVCGGCLSMLDAGVPLKDYVAGVAMGLIKEGN RFAVLTDILGDEDHLGDMDFKVAGTENGVTALQMDIKIEGITPEIMQAALAQAHDGRQHI LSRMHEMAGGGAKELSDFAPRMISFKINPEKIRDVIGKGGSVIRALTEETGTTINVEDDG MVTISSPDMARVAEARRRIEEITAEVEAGQIYEGTVTRLLDFGAIVQLLPGKDGLLHISQ IANERVNAVSDYLKEGQKVRVKVIEADEKGRVRLSMKALLREEGENK >gi|319805017|gb|ADMF01000018.1| GENE 26 26375 - 27112 802 245 aa, chain + ## HITS:1 COG:RSc2064 KEGG:ns NR:ns ## COG: RSc2064 COG0149 # Protein_GI_number: 17546783 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Ralstonia solanacearum # 2 244 4 248 248 230 52.0 2e-60 MRDRIVIANWKMNGSREANARWTDEFLSSPQPACRTVVCAPFVYLGELALRALGTHLEVG AEDVNENPAGAFTGEISAGMLHDIGMSCAIVGHSERRTLYGETDNRVAMKALALVKAGLK PVVCVGETLEERETGATPSVILRQLNAVLTIVRPEDLLAVAYEPVWAIGTGKTATPEIAQ SVHALIRTRLVEVSPKGGASTPILYGGSVKPENAHELFAQPDIDGALVGGAALKASSFLA IANAF >gi|319805017|gb|ADMF01000018.1| GENE 27 27167 - 27526 381 119 aa, chain + ## HITS:1 COG:RSc2063 KEGG:ns NR:ns ## COG: RSc2063 COG1314 # Protein_GI_number: 17546782 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Ralstonia solanacearum # 1 90 1 90 115 76 65.0 1e-14 MHFLLSIALVLQIISAVVVIVLVLMQHGKGADLGAAFGSGASGSVFGATGSANFLSRSTA IAATVFFCSTIALTLASGAFNKRSAQPEGGVLSTIEQPASQEQGMAGDANKSPVNQIPR >gi|319805017|gb|ADMF01000018.1| GENE 28 28230 - 29192 1254 320 aa, chain - ## HITS:1 COG:SMc02344 KEGG:ns NR:ns ## COG: SMc02344 COG0715 # Protein_GI_number: 15966325 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Sinorhizobium meliloti # 4 314 11 328 344 117 28.0 4e-26 MKLKNLFAAAAVTAGLCLTGMSAVQAAPKMPESISITYVKSPFNLQNIVMKERGMLEDAF KAEGVKINWRVINSGAIQGQAMASGDLDFSAVMNTASVLMAAGAGNPIRIASGVGHPQKI FAIIGKPGTDYSIKELKGKKVVGPKGTVLHQLLVAALKKEGMTIKDVDFISMDPAKAMTA VLSGSADAGLVAAGLIIKANAEGAKTITTCEGLVEPNLVMAVRQAFVDQYPEAYERVVAT NRAALKWIREHKAEALAMGAKEQGISIENAEKLYDWSGFYDVLTEADVKGLAADQQFLID NGMMEKAVDVRSLILPGAMK >gi|319805017|gb|ADMF01000018.1| GENE 29 29704 - 33801 3787 1365 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0501 NR:ns ## KEGG: Ent638_0501 # Name: not_defined # Def: outer membrane autotransporter # Organism: Enterobacter_638 # Pathway: not_defined # 1056 1351 1036 1358 1371 95 27.0 2e-17 MNRTYKVAKSLTRGVVVTSEKASSYQGKAVKTVVAAAVAALVAGTAIAATDAEGVLKVQE NKTLLEGASYSQISINDAKENTKVSGTTLTLTKQGTAVDSQPDSALFSNVKGGTFEFDSV SVKGAYAHGLYVNTTAGGNSETATLDADIKSYDFQSDWKNTTNGETSSAIHTMGGEIKAT FDSLTGTAGHLVSAENQWATGTNDNKFDMTATVTVNKTLNFNATDSAVLATVRNTNQAAK VTVKAEDVDVVLNSSGDVLSSVIGSKDGTSYSGTAEVTVNAKSAVLTGKTSAIEAVGSNT ENSAKVTLNTTGAAVLKATDGSTILQSGASNVALSAKTLTINEAGTTSKAISLKDSSQLS ITATDDATIYGAVVGTSGTAISADTNTLTLEDASGFLGTFNQIDGTTSITGAKYFGGKVN VQGGSIETDDVVLTDTTTIGKSDAQSGNASFKAKSVTLGKATTNDATAKAGTFKTEKNGV ATIDTLTFATTDSSLNNAGTLVVNTVDSGDLKTVSVSNTGTIETSIANLIKSSTDEEGDV TYSATAFGSAATTGTGNTGALIDTNTTDTYSLSDYITISSKLGNKFNFTNANIVSVDAEG KQSKLKLEEIGSSTATGPTNFGRSDVIASYNSGNPDFNGNQFLARPLTIGSLEVAKTATN ENELKSLTIGNATTNTLTLRGNAKGEVIIGAKEGDKLVDVTFRRVDLGAEDTDFGTIDNA VTFAAQSTITGAFTFTNEAGTTVAANGGELTVNGTMTTNGLTNNGQISVNGDLDTAWYEQ ASTNAVVITDGTFAILGNKPAATTTQAEGDEEAPKAFENAVKVQTVSFTSSSTGEEPNLG VLSVGASTAAANAAVADAYGEIDADKSVIYIAKQAVFGDGTAALTVGGDQQATDLLVDIQ GVAGTAGYAAKDGVLQNAISTTNGATVTLVGVKNAPAAAFEGENGAKTLKLAASATGTLT VDYGTMFYGTSTDHTSQGTVAADGTISFARNKAYDDLLNDTYQGGNAKADLDAVSFGHNQ LSDAVVWGLTDYIADVKASEGYSVAQDQSQYLKNKISDYLDSVNTASVMALAGGAFNTAL DVNDQVTAALERRTSLASLNAPRTTGVTPWVDVFGTTNEGKRLYGEGYGYEADIYGAVLG LDYTASCGATIGLAFNVGQADSNSVGDGIKVDNDSDFYGVSLYAAQQLGDFNLRADVGYT KLKNDLSTNTVFGQVKESEDADVFTFGVGTEYLAKFGALNIVPHAGIRLTRIDMDDSKFG ADYDTMTVYQMPLGVAFSGTFDTNGWKVAPMVDLSVVPTFGDKDVKYTFVGASDSNRVFD SNPIRATIGVEAQKDAWTFGLNYGLTAGSDDRLNNAFNANLRYSF >gi|319805017|gb|ADMF01000018.1| GENE 30 33888 - 34454 332 188 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKEGSRGLIPLSGDNCTHSPSEGMSSLSLAPVCRSRGDGSFLRSASTVDEQQEYLMSENL LPDELSESPPGRYRPPGYASADKRRRAIALFEAGIGYTKASRILDLPSTTLRDWAEAWKS GKFSVEISPNLYRYSDAVRTKAIAMRLSGSTWKAIRAATGAPPATVRRWIDAHCAQTKRK PSKPEPFK >gi|319805017|gb|ADMF01000018.1| GENE 31 34466 - 36106 245 546 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 322 512 20 216 245 99 34 1e-19 MPKAFRNPPNDQNDRSAPPGAERRSGLRRFLPVLLPAVILLGWWLVTSSGAVPALLLPGP GAVAKRFLSLLDSGELLTHAAVSMGRVFAGFLLSASAALGLALLLYRRPLWESALSLVLE ALRVIPPLSLVPLLILWLGIDEAPKLAIVVLASFFPIYLSALTALRSVSSKYKELAQMLG LTESARVQEILLPGAAPGILTGLRLGFGYAWRALVGAELIAAASGLGYLIEDASSLARTD VVMVGILTIAGLGILCDQLFRRGAEGWTKSRLNRRRKIDGGQTALETGSSSTAEPERSLW GIAFEGLVVSYPGLTQPPVNHLTLSIAPGSVTAVLGRSGCGKTTLLKAAAGLLLPQAGAV RFTSPDASGGTYPKVAMVFQEPLLLPWKTVRENAALALSARTGEALSEACKSAAVTQALT LAGIADLAERFPAELSGGQQQRAGLARALSAEPDVLLMDEPFGALDALTRLELQDETRAL FNRRRMTVLMITHDVREAVRMADRAVVLRGGSAAADHSLLMPFPRRFSDPAVGAAEEGLL AELLHH >gi|319805017|gb|ADMF01000018.1| GENE 32 36270 - 37691 1851 473 aa, chain - ## HITS:1 COG:NMA0753 KEGG:ns NR:ns ## COG: NMA0753 COG1055 # Protein_GI_number: 15793728 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter NhaD and related arsenite permeases # Organism: Neisseria meningitidis Z2491 # 14 472 4 468 473 414 51.0 1e-115 MTLLSSARMSAAILALGALTAVPAHAAGIDGSSLGLTWAVPFAGILLSIALCPLFLPHFW HKNFGKVAVFWALCCAVPLCAVLGFSVGTDAIVHVLLADYVPFIIFVGSLFVVAGGIHVR GSFVGRPIVNVAFLGLGAVLANFMGTTGAAMLLIRPLIEANAGRTRKMQTFIFFIFLVAN VGGALTPLGDPPLFLGFLKGVGFFWTAEHLMLPWLLCSGVLLFIYFLIDSACFKKDVADG FKAPAETKAFAIEGGINVLLLAGIIGAVLYSGFSRSGIEFTFLNVHFALESIVRDLCFLA LAGLSLMLTAKATREANHFTWDPILEVAKLFFGIFVCIVPVLEMLRAGHDGAFASLVALV TNADGSFNNTFFFWLTGSLSAFLDNAPTYLAFFNLAGGDPAVLMTTDAQTLMAISMGSVF MGAVTYIGNAPNFMTVAICNERGVKMPSFFGYMLWSVGILFPVFFLMDMVFLT >gi|319805017|gb|ADMF01000018.1| GENE 33 38145 - 39341 1781 398 aa, chain - ## HITS:1 COG:RSc2933 KEGG:ns NR:ns ## COG: RSc2933 COG3203 # Protein_GI_number: 17547652 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 26 280 22 263 379 99 34.0 1e-20 MFKKTIAALAVAGAFGTMAAGAVYAADVTLYGVVDLGLKYSHVDADQSGVDAVDKLEMKS GSQSGSRFGIKGAEDVGNGLKVGFQLENGFDADTGSLGYNSRLFGREARVYLSGDFGEVA FGRMGTLGSGNGTYGLLGGMTPFGTSWGGSVENGTYFVGNARADNTVTYKTPTFAGFTAY AQYSFDMNTKQDTPLGQTEGKASANRYYALGANYKVGSLDVTAVVDSYNWSNKINTYGGS DVDDALTVTLGGSYDFGVAKAYLSGQYFDNMLANDATVAADQKDTMDTYASFGSYFNGKA FKGYSILAGMDAPVLGGKALFAVGYTDAKDADGSDALGKTELSRYGASVGYTYDLSRRTN VYAVAAYYKDSVDKDASSSHQDHDPSTATIYAGIRHTF >gi|319805017|gb|ADMF01000018.1| GENE 34 39714 - 40229 552 171 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238796288|ref|ZP_04639798.1| ## NR: gi|238796288|ref|ZP_04639798.1| Transcriptional regulator [Yersinia mollaretii ATCC 43969] # 1 168 4 166 170 92 38.0 1e-17 MELQYAQPPSHEDILRVIRRNLNTEPSCEKVSCIEMSFLLQMVDLERRNMVFSNLTKSTG VTEGKFALLMVLHDAGMPLPVGELAARLRVSTPTASTMLQRMLVSPEKLIVKTPSATDAR STLIALTDAGQKYLTDLLPGHFQRVEAFASVLSPEERLELIGLLRKLLVRR >gi|319805017|gb|ADMF01000018.1| GENE 35 40306 - 41508 1125 400 aa, chain - ## HITS:1 COG:XF1097 KEGG:ns NR:ns ## COG: XF1097 COG1488 # Protein_GI_number: 15837699 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Xylella fastidiosa 9a5c # 2 387 4 388 394 521 63.0 1e-148 MIIESLLDTDLYKFTMQQCVLHQFPAAEVSYRFKCRTPNIDLSPFIDEINAEIDHLCSLY FKDDELEYLGNLRFMKSDFIEFLSLFHLKRKYITVERDPSRPFGIDIRIKGPWLHTILFE IPVLAIVNEVYFRRTYPGLSDAEGRRRLDAKIDLLLNEPHAEDLHISDYGTRRRFSREWQ RAVIERLSERLGSRLSGTSNVLFAKELGLVPLGTMAHEYLQACQALGPRLRDTQVFGFEQ WAKEYRGDLGIALSDVYGMKPFLEDFDMYFCKLFDGARHDSGDPFLWGEKMIEHWSRNKC DPRTKLLIFSDGLNIPRVLELWRRFNGRVRLGFGIGTNLMNDRGPEPLNVVIKMTQCNGQ PVAKISDSPEKSMCEDESYVRYLRQVFHMDDPTAAAKGLK >gi|319805017|gb|ADMF01000018.1| GENE 36 41786 - 42409 697 207 aa, chain + ## HITS:1 COG:RSc2344 KEGG:ns NR:ns ## COG: RSc2344 COG2860 # Protein_GI_number: 17547063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 4 179 6 181 207 151 43.0 6e-37 MQSLTIIAEVADGIGMFGFAVAGLFASAGRRIDPVGVFVSVFTTAFGGGIIRDILLDLRP FYWLSHPQWIWMTLGLTILAPVIVRRVQRFWQRRILLWADAVGLAFFAVGSCATSDRLGH PLIVSVLIGVVTGVFGGMLRDVFCAKLPSVLSNEEPYASVAFAGCWVYLGLVHAELVPAD IALWGCCALIMIVRMTSFRIPWMKVRY >gi|319805017|gb|ADMF01000018.1| GENE 37 42479 - 43885 1939 468 aa, chain - ## HITS:1 COG:ybbX KEGG:ns NR:ns ## COG: ybbX COG0044 # Protein_GI_number: 16128496 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 2 95 3 96 453 71 43.0 3e-12 MYDLLLKDAHVVDPLNGVNGVNDVAVEGGKIAAVGPDLTGPAREVIDVSGWVLQPGIIDS HVHLGSMWGSPYGPRMLAMNGVTTCLDMAGPLDDILEKTPQYGAGLNTAILQFASPPFTF KTNAPSKAEMVELIDKSLAEGALGVKLLGGHYPLTPEVSSTLIKTALERRAYVAWHAGTS AHGSNLEGMIEAVQMADGYPLHLAHINAYCRGAIKNEIDEARTAVELLNANPNIFSESYI SPKNGTRLTCGPDGKIQSQVTGNCLRHFGFTEDRDGVRKALLAHKAFAVYDAGGYSDLMT GEDAVKLWESHNTDVGGSFNINPPIPRILLAQVKRPDGAFVVDAISTDGGCIPRNVILSQ GLSLVKLDVLTLTEFAQKTSLNPARMLRLKDKGHLSVGADADITIYDYAAQTPKMSFVEG RKVLFKGEVLGKNANIICTERGQKAIEARGLKAIVVDPGLPVDRVKAL >gi|319805017|gb|ADMF01000018.1| GENE 38 44117 - 45169 998 350 aa, chain - ## HITS:1 COG:RSc1068 KEGG:ns NR:ns ## COG: RSc1068 COG1472 # Protein_GI_number: 17545787 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Ralstonia solanacearum # 14 342 12 350 350 278 48.0 9e-75 MLTPKKLALAHTLGPVVVDIAGTVLTEHEIRRLEHPMTGAVILFTRNFTSAEMLRALCGA IHAVRPGILITVDHEGGRVQRFREGFTEVPSMAACRAAGDQAQARLAAAGYVLASELRAA GVDMTFAPVLDIDYGRSAVIGNRSLGSDRDEVERNARALMSGLRLAGMANCGKHFPGHGW AEADSHVACPTDNRSEAEIRRDLSIYRGLALELESIMTAHVAYQCFDGEVATYSPRLLKT ILREELGFSGLIFSDDLSMKGACGDEPPLVRAQKALAAGCDMVLHCNHPEEADEILAGLE WSRTPAFDERLARLLPDEAESVLSMEALRAEPRWQRAEELLADIEGFRAA >gi|319805017|gb|ADMF01000018.1| GENE 39 45266 - 46042 1083 258 aa, chain - ## HITS:1 COG:XF0060 KEGG:ns NR:ns ## COG: XF0060 COG0854 # Protein_GI_number: 15836665 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Xylella fastidiosa 9a5c # 3 248 4 253 260 214 48.0 2e-55 MIRTQLSVNLNKVALVRNSREGNWPDPVFFGRIALEAGAAGLTVHPRPDERHIRRTDLAP LKALVEAYPGREFNIEGNPFENLMPILKEIRPHQATFVPDAADQKTSDHGFEFNNPEVRE KLAAVVAEAQSYGCRVSLFMDPEPEFTRWAKETGADRIELYTEGYAAAYGTALEDDILQP YVDSALLCDELALGVNAGHDLSLDNLEKLLTACGNIKEVSIGHALTVEALQFGFAETIRR YNELLDRVAAKPRVFPQE >gi|319805017|gb|ADMF01000018.1| GENE 40 46196 - 47251 756 351 aa, chain - ## HITS:1 COG:RSc1065 KEGG:ns NR:ns ## COG: RSc1065 COG1381 # Protein_GI_number: 17545784 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Ralstonia solanacearum # 82 351 14 272 272 154 37.0 3e-37 MDAVGGADALAEGGMLTSAGADDGDAPSPSLDAEQAEGRWGDDALLDLPRLPDGKKEVLA SSKSATVEGVVARGRAAEAILEELARTEALGASGGRSGVRRRQRPQREPGFVLHARPWSE SSMVVDVLTAHFGRVFLVARGAKRPGSNLRGLLTPFSPLALTWTGKKEAKVLTQAEWLGA LAALRDEALLSGFYVNELVLRLTEREDVHPGLFQSYVHVLSALADEDPAVRQTGLRSFEA ELLAHCGWGLALEDRDLQKGAEWFLLTPEGALKGVEGTPEDAANLPFASMLWPKTVAAAA ACGSAERKSHIAALSPREMKRLRELLKTAIDLHLEGRPLRSRRLLADLKKL >gi|319805017|gb|ADMF01000018.1| GENE 41 47337 - 48419 1375 360 aa, chain - ## HITS:1 COG:RSc1064 KEGG:ns NR:ns ## COG: RSc1064 COG1159 # Protein_GI_number: 17545783 # Func_class: R General function prediction only # Function: GTPase # Organism: Ralstonia solanacearum # 60 360 1 298 298 288 50.0 2e-77 MTDDLKNFEKAPEADTPQTEDPTTLEMPTDDLEADIEPGKPDDDFERMLAQAGALSSAKV PEGFRCGYVAVVGRPNVGKSTLINAIVGEKVSITSKKPQTTRNRVLGVLTTDQAQFIFVD TPGFQTKVKNQLTRRMNRSVRSTLSEVDAVVMVIESNGWKPGDLEVLRLLPTEASNVILA VSKTDLSKDRNALLPLMADSMRRYPFAAIVPVSAEKHRQLDDLLREIEKLLPESIPYFDP DLYTDKSPRFLAAETIREKAFRLLGDELPYGTAVTIDKWKEETDDKGVRRADIVATLIVD RESHKPIVIGEKGAKLREISRLARADIEEQLGCPVHLEVWVRVRRGWSDDVKALKTLGYD >gi|319805017|gb|ADMF01000018.1| GENE 42 48416 - 49096 718 226 aa, chain - ## HITS:1 COG:RSc1063 KEGG:ns NR:ns ## COG: RSc1063 COG0571 # Protein_GI_number: 17545782 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Ralstonia solanacearum # 2 221 1 220 256 218 54.0 6e-57 MLSLEALEERIGYVFQDKKLLRRAVTHRSFAQEHNERLEFLGDSVLNCVIGYALFLRDKH FNEGELSRVRANLVCEKTLHEIALKIDVSSFLYMGEGEVKTGGAHRASILADAMEAIFGA VFREAGFDTAQRVILKLYDPILTGLTPEQMSKDPKTRLQELLQGDHLPRPEYAIVAATGA AHERRFECECRIERLKIVTRGTATSRREAEQAAAELALTAAKEALK >gi|319805017|gb|ADMF01000018.1| GENE 43 49152 - 50042 1053 296 aa, chain - ## HITS:1 COG:RSc1061 KEGG:ns NR:ns ## COG: RSc1061 COG0681 # Protein_GI_number: 17545780 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Ralstonia solanacearum # 1 296 1 305 305 310 50.0 2e-84 MNFALILFILTVITGIFWIFERTVFLPQRRRKAEEAASAFEAANREALGRGDAAVGEDLR RLKATALRQPWWLEYTAGLFPVILIVFLLRSFLFEPFRIPSGSMLPTLHIGDFILVNKYD YGIRLPVLNTKVLEVGAPQKGDIIVFRYPMDESVDFIKRVVATPGDRVEYRDKVLYVNGV EQAQSRPRDFVDDSTMVTLEERTENLSGLEHSIAVDHRRPSWVPMQAVMKKESTCSYNDR GFVCTVPEGKYFAMGDNRDNSEDSRFWGFVPDENLVGKAVCIWANFSDMGRIGSIY >gi|319805017|gb|ADMF01000018.1| GENE 44 50148 - 51941 2154 597 aa, chain - ## HITS:1 COG:RSc1060 KEGG:ns NR:ns ## COG: RSc1060 COG0481 # Protein_GI_number: 17545779 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Ralstonia solanacearum # 1 597 1 598 598 902 77.0 0 MQNIRNFSIIAHIDHGKSTLADRLIQRCGGLSDREMSEQVLDSMDLERERGITIKAQTAS LRYKAKDGQIYELNLIDTPGHVDFSYEVSRSLSACEGALLVVDATQGVEAQTVANCYTAI DLGVSVIPVLNKMDLPSADPTAAAEEIEDVIGIDATDAIPCSAKTGMGVDDILERVVRDV PPPKGDPQAPLQALIIDSWFDNYVGVVMLVRVVNGTVRPKDKITLMATNATHLVEQIGVF TPKSKMRESLSAGEVGFIIAGIKELKDARVGDTVTLAQKPAEEPLPGFKAVKPQVFAGLF PVESNQYDALRDALTKLQLNDAALRFEPESSQALGFGFRAGFLGLLHMDIVQERLEREYN MDLITTAPSVVYEVLMTDGEVVQVENPSKLPPVDKIDEIREPIDTVTIFVPNEYVGAVMK LCQDKRGVQTNLAYHGRQVHLTYDLPLAEIVLDFFDRMKSLTRGYASMDYEFKEYRAADV VRVDILINGDKVDPLSAIMHRSNAVFRGRELVQRLRTLIPRQMYEVSIQAAIGANIIARE NVKALRKNVLAKCYGGDITRKRKLLEKQKAGKKRMKQVGSVEIPQEAFLAILEVDEK >gi|319805017|gb|ADMF01000018.1| GENE 45 52354 - 53595 1323 413 aa, chain - ## HITS:1 COG:RSc1054 KEGG:ns NR:ns ## COG: RSc1054 COG0304 # Protein_GI_number: 17545773 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Ralstonia solanacearum # 1 409 1 408 410 487 64.0 1e-137 MMNRRVVVTGLGLISPLGNDLASSWAAALEGKSGIARITGFDASEFGCQIAGEVKGFDAG KYLDVKEVRRFDKFVHFGVGAGLMALEDSGLEVTEENAPMIGVAIGAGIGGLPSICANND AMVSRGPRRISPFMIPGCIINMTSGQLAIMKGLKGPNIAHVTACSTGLHAIGEAAYIIAR GDADVMLAGGTESTVCKLGIGGFDAMHALSRRNDAPEAASRPFDKDRDGFVMGEGAGVLV LEDLDHAKARGAKIYAEIAGYGLSGDAHHITTPSTDGPVRCMRMALRHAGMNPDEIDYLN AHGTSTSVGDANEVKAIREVFGDHAARLAVNSTKSMTGHLLGGAGGIESVFSVMAIRDQV SPPTINLDNLDPECAGVDIVGKTARQMKIRAAMKNSFGFGGTNSTVIYKAFAD >gi|319805017|gb|ADMF01000018.1| GENE 46 53924 - 54163 462 79 aa, chain - ## HITS:1 COG:RSc1053 KEGG:ns NR:ns ## COG: RSc1053 COG0236 # Protein_GI_number: 17545772 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Ralstonia solanacearum # 1 77 1 77 79 79 68.0 1e-15 MDDIEQKVKKIIAEQLGIKEEDIKNESSFIEDLGADSLTTVEMSLALEDAFDIEIPDTEQ ENLRTVQQAIDFVKAAVAK >gi|319805017|gb|ADMF01000018.1| GENE 47 54290 - 55057 230 255 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 17 254 7 242 242 93 29 6e-18 MEKMIFAADALAGQICLVTGASRGIGRAVFEAFLQAGAVVIGTATSEAGAAALDEAGKAF EGRGRGIVLNVCDAEASKKAVDDIVAEYGRIDVLINNAGITKDGLVMRMKDEQWETVIET DLTAAFRLARACVRPMMKQRSGRIISMSSVVGAMGNAGQVNYAAAKAGLVGMTMSLAREI GSRGITVNCIAPGFIDTDMTKDLPEEHKTALIGQTALGRLGQTDDVANACLYLASPAGAY VTGIVLHVNGGMYMG >gi|319805017|gb|ADMF01000018.1| GENE 48 55099 - 56031 934 310 aa, chain - ## HITS:1 COG:RSc1051 KEGG:ns NR:ns ## COG: RSc1051 COG0331 # Protein_GI_number: 17545770 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Ralstonia solanacearum # 1 308 1 308 309 297 59.0 1e-80 MRIAFVFPGQGSQSVGMLSGFADNAVVADYMARANAALGEDLVKLIAEGPAEVLSLTVNT QPALLAASAAFYEAWIAAGGRRPDVMAGHSLGEYSALTSAGTFAFEDAVKLVRFRAQAMQ EAVPVGVGGMAAVIGLDDEAVIEACREASAVGPVEPVNFNSPGQVVIAGRSDGLAKAVEL LKARGCRRAIPLAVSGPFHSSLLAPAGERLAKHLAEVKVSAPSVPVYANVTAQLHTTPDE IRALLAQQVSSAVQWTKIVKAMEASGVTDIVECGPGKVLTGLVKRIAPEIRLHGISSEAT LEATLEALAA >gi|319805017|gb|ADMF01000018.1| GENE 49 56095 - 57090 914 331 aa, chain - ## HITS:1 COG:RSc1050 KEGG:ns NR:ns ## COG: RSc1050 COG0332 # Protein_GI_number: 17545769 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Ralstonia solanacearum # 4 328 3 326 326 333 55.0 3e-91 MSAKYSRIISTGSALPAARITNEDLARRLAADGIETSDEWIRTRTGIEARRFVNGTTETT TTLAAAAAQKALEGGGVDPKTIDLIIVATTTPDQVFPSTAAAVQRLIGAAGCAAFDVQAV CAGFIYALNAADAMLRAGPYQRALVIGAETMSRVIDMKDRATCVLFGDGAGAVVLEASAK PGILAARMYADGSYDENVLGLTARIDHGELCGRPYINMDGRQVFKLAVDGLTSSAQEVAV LAGVDPQDVDVYIPHQANLRIMTMVAKKLGIPDERMIKTVSEQGNTSAASVPLALDEAVR SGKISDGSLVLLQAVGAGMAWGSAIVRWRSE >gi|319805017|gb|ADMF01000018.1| GENE 50 57440 - 57622 239 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|187477616|ref|YP_785640.1| 50S ribosomal protein L32 [Bordetella avium 197N] # 1 60 1 60 60 96 71 5e-19 MAVQQNKKSVARRGNRRAHDFLKNPPTAVEATTGEVHRRHHISPTGFYRGKKVIATKQDE >gi|319805017|gb|ADMF01000018.1| GENE 51 57774 - 57953 63 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQKASFFRFEEFSPIKKEGSCPPSRKSGAGDESRTRDLNLGKVALYQLSYSRTLRLVFP >gi|319805017|gb|ADMF01000018.1| GENE 52 58362 - 59714 466 450 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 2 444 3 444 458 184 28 2e-45 MKFDAIIIGFGKAGKTLAGFLAKKGEKVALIERSEKMYGGTCINIGCIPTKTLVHSAHLA RRDVSWKEKQEYFRAAMEQKDAVVSFLREKNYEKLADDPNVTIFLGVGSFAGKNAVEVRG KDLAVTLEAPKIFINTGSETVIPDLPGVTGNPRVFTSTTLLDLKELPQRLTIVGGGYIGL EFASMFASFGTQVTVLEKGPQVLPREDRDIAAAVQGILEKKGVQFKTHVNVTQIDGGTVV YEDRAAQKEVRLEGDAVLLAAGRRPNTEALALEKAGVEVNARGAIVVDEHLRTTNPQVYA LGDVKGGPLFTYISLDDFRIVCSSLYGTGDRRISDRDPVSSTVFIDPPLAHIGLTAEEAQ SLGRHIKVNTLPVAAIPRARTLNQAEGLFKIVVDADTQEILGCTLFGPEAGEVINTVAVA MKTGQKYTFLRDFIFTHPSMSEALNDLANF >gi|319805017|gb|ADMF01000018.1| GENE 53 59713 - 60084 165 123 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVFSVFARGRWFDGIHRRRNYCWTLMIIKRADGASSAQIVTVFVSRALVDILTLPNHVTD IALIITPSSFLWTTAQHGAPRNAMGWNTPAHFRFERNFSFNFGLTQPLTSRPIGRKVALL IHS >gi|319805017|gb|ADMF01000018.1| GENE 54 60789 - 62141 1937 450 aa, chain - ## HITS:1 COG:Cj0088 KEGG:ns NR:ns ## COG: Cj0088 COG2704 # Protein_GI_number: 15791476 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Campylobacter jejuni # 6 445 1 439 445 487 70.0 1e-137 MPGGIMDIMLILQIIVLLGAIFLGVRLGGIGIGYAGGAGVLVLGLILGMKPGNIPWDVIL IIASVIAAISAMQLAGGLDYLVQIAERILRSNPKYINYLAPVVTYVLTIFAGTGHTAFSM IPVIVEVAKEQKIRPCCPLSIAVVASQIAITASPVSAAVIYMSGVLEPFGWSYPALIGIW LVTTFAGCMLTAFVMTKIQNMDLDSDPVYKERLAKGLVKIGQGAAQTELKPFAKRSVGIF LIGVLFVVLYASAISPAIGLISPVIVPRDAAIMSLMLLVATLITICCKVDISDIASESSV FKSGMVACVCVLGVAWLGDTFVSGHTAEIKTFAADTVVAYPALLAVVFFFAAMLLYSQAA TAKAITPAIVAALGITAANPGDSGMLVASFAAVSALFVLPTYPTLLGAVQMDDTGTTRIG KWVFNHAFFIPGVLAIVFSVALGFLAISIF >gi|319805017|gb|ADMF01000018.1| GENE 55 62355 - 63752 1629 465 aa, chain - ## HITS:1 COG:Cj0087 KEGG:ns NR:ns ## COG: Cj0087 COG1027 # Protein_GI_number: 15791475 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Campylobacter jejuni # 2 464 3 465 468 483 50.0 1e-136 MSRIENDFLGSLEIPDDVYYGVQTMRGKQNFHITEMPMSQEPFFAIAFAYVKKAAALTNK ELGTIPADVADALVWACDQLIAGKYNDQFVTDWLQGGAGTSTNMNCNEVICNLACEHLGL AKGDKKVSPNDHANFGQSTNDTYPTALHLSLILRSNVLVKAVEDLVASFYKQAEKTKDVL KMGRTHLQDAVPMSFAQEFHGWGTTIGDEIKTIREAQEHLKVVNLGATAIGTTVTCHPEY PAKAVKRLAELTGIPFVNSDDLIAATSDCGAYVALSSACKSLAVKLTKVCNDLRLLASGP RTGLGEIVLPQLQPGSSIMPGKVNPVIPEVTNQAAFLAIGLDTSVMLAASAGQLELNVME PVISFALYMQMKVLTNSCNALREKCIDGIVVNAKHCEDLVMGSLGIITVLKPHFGYKPCA NIAREGFLTGKSLHELIVDEKKMLTQEQWDKVFTHDNLINPKFEQ >gi|319805017|gb|ADMF01000018.1| GENE 56 63960 - 64811 1110 283 aa, chain - ## HITS:1 COG:HP0191 KEGG:ns NR:ns ## COG: HP0191 COG0479 # Protein_GI_number: 15644820 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Helicobacter pylori 26695 # 25 261 6 242 245 298 56.0 1e-80 MTQEAQKTPAAPAAPAAPAAKKQHRMLKISILRYNPQDPDSVPHMQTYELQESDSMTLFI ALNDLRNEQDPTLQFDFVCRAGICGSCAMLINGKPGLACRTLTKDLPTEFTLAPLPAFEL IGDLSVNTGKWMRNMSERMETWVHMKNEEIDLRKKEVPMDPQLAEDIYVLDRCVECGCCI AGCGTVRVRPDFIGAVGINKIARFRLDPRDERNDADYYEVVGDESGVFGCMSLLACHDFC PKDLPLKTQIAFIRRKMAEQGMGNYDKVLPTQKKSIPIKPIMQ >gi|319805017|gb|ADMF01000018.1| GENE 57 64831 - 66816 2828 661 aa, chain - ## HITS:1 COG:Cj0409 KEGG:ns NR:ns ## COG: Cj0409 COG1053 # Protein_GI_number: 15791776 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Campylobacter jejuni # 1 655 1 658 663 836 61.0 0 MKIIYTDVLVIGGGLAGLRMAVAAKRRGHDSIVLSLVPPKRSHSKAAQGGMQASLGNVIK GLGDNEDVHFGDTVRGSDWGADQEVVRMFVNTSPKAVRELAAWGCPWSRITPGDRQVIIN GEKVTITERKEAAGLANQRDFGGTKKWRTCYVSDCTGHAMLNVVSDRLIAEKVPVIERVE ALRLIHDGKRCYGAIVRDLITGELMAYVAKATAIATGGAGRIYRVTTNAVICDGVGYDLA LTTGVASLSNMEAIQFHPTGIFPAGILVTEGCRGDGGLLRDVDGYRFMPDVEPEKKELAS RDVVSRRMEERIAMGKGVKTKYGEHLWLDITLLGEHHIKHKLREVYEICHYFLGVDPTKE WIPVRPAQHYTMGGVRTNPTGESPQLKGLFAAGEAACWDMHGFNRLGGNSVAETVVAGMI VGEFIADFCEKPENGIDIPTSIIYESLAKVQNELNGFIKCTGNEDAVKLRTRMQEVMTTK IGIFRRGKDMEEAVTELEELYKRSFNIPVKDVVGNNPELVYAYRTRSMLRVALTVAYGAL NRQESRGAHYREDFSVRDDVKWLNRTIATWKDGDTLPTLSYQPLDISKMELPPGFRGYGV KNYIENPESAKRQAEVDAIRQKMEAEGKDRWAIQDAIMPYQHLLPKRLLGRNERIDEPLN D >gi|319805017|gb|ADMF01000018.1| GENE 58 67876 - 67968 58 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDSIDFGELIEVLVMNVVKHKLFMTHDAI >gi|319805017|gb|ADMF01000018.1| GENE 59 68022 - 68414 597 130 aa, chain + ## HITS:1 COG:lin0837 KEGG:ns NR:ns ## COG: lin0837 COG0251 # Protein_GI_number: 16799911 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Listeria innocua # 1 124 1 124 125 116 51.0 1e-26 MANRIVQTDYAPAAIGPYSQGAFTQIALYCSGQLGIDPATGKLADGIEEQATQAFKNLRA VITEAGLTMADIVKVTIFLTDMANFDAVNKAMKTFVPAPFPARSCFAVAALPKGGLVEIE AIVDRIGQPF >gi|319805017|gb|ADMF01000018.1| GENE 60 68435 - 70567 1996 710 aa, chain + ## HITS:1 COG:NMA0675 KEGG:ns NR:ns ## COG: NMA0675 COG1200 # Protein_GI_number: 15793658 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Neisseria meningitidis Z2491 # 41 704 19 674 680 633 54.0 0 MPPRPYARPAAESSSAASERRGGSRPAGEIKSGKLDPLPVRLKRLGLVSDWDFVLHLPLR YEDETRIDPIGLLRAGETAQIQGEVVRSSTISTARGPQLVAELADQTGRVTLRFIHYYPT TRSLLTIGTTLRAFGEPRPAYSGGLELIHPKLKKPVAGEDALPSSLTPVYSLGEGIQQTW LRKRINRALLDLMGMDDPLPAEVAAALQLPGLKASLEYLHHPPADAPHEPLMNRTDPHWQ RLKFDELLAQQITLKQLRAAVGQESAPALTDSAAKLTTAFLNALPFALTRAQTRVWDEVA HDLAEPRPMHRLVQGDVGCGKTVIAAMAALRAIEAGRQAALMAPTEILADQHLEKIARWL EPLGVKIVRLTGRLKASEKTAALAAAASGEAQLVIGTHALIQEGVAFKALGLAIVDEQHR FGVEQRLALTRLMPDGRRPHLLMLSATPIPRTLAMSYFADIDVSVIDELPPGRTPVATKL VRLDRRDAVLAVVNDTVSKGRQVYWVCPLIEESEMLDLTPASRCAEELAARLPHVRVGLL HGAMSAAEKEAVMSDFAAGRIELLVATTVIEVGVDVPNATLMIIEHAERFGLAQLHQLRG RVGRGGGAAACVLLFDGNLSETGKERLKIIRESNDGFEIARRDLELRGPGEFLGEQQSGM PMLQFADLDSDAELVETASRTADLMLKQYPEQAARHAARWFSAKAELLKA >gi|319805017|gb|ADMF01000018.1| GENE 61 70618 - 71562 1008 314 aa, chain + ## HITS:1 COG:RSc2690 KEGG:ns NR:ns ## COG: RSc2690 COG0583 # Protein_GI_number: 17547409 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 307 4 310 317 349 56.0 5e-96 MTLTELKYVIAVARERHFGRAAESCCVSQPSLSVAIKKLEEELGVTLFERRSNDIAVTPI GSQVIAQAQKVLEESRRIIDIAHSGQDPLSGPLRLGVIYTIAPYLLPELISAMTVATPKM PLFLEENFTSELLNKLRSGQIDVAVTANTLSDTGFMTQEIYEENMVVAVPAHHPWVNRSY VGPDELKDQTMLLLGTGHCFRDQILGICPTMARFQASASTVQRTVEGSSLQTICHMVAQG LGITVLPSSAVPYLAGLSNTVKIIPFKNPTPTRRVVLVWRKSFTRMAAVDALREQMKKLR LNGCVPLNEPALLR >gi|319805017|gb|ADMF01000018.1| GENE 62 71601 - 72830 1263 409 aa, chain + ## HITS:1 COG:SMa0447 KEGG:ns NR:ns ## COG: SMa0447 COG0628 # Protein_GI_number: 16262687 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Sinorhizobium meliloti # 61 381 24 346 373 179 38.0 1e-44 MTDDQQPAPGAAERRRSTARSAAAKRVRGDFVAQIPKRFSEGFTERIDLIIRIVFMVVVA VGCYLVLEPFLTAILIAAVLAVVTWPVFNKLRSGMRQSSTAAASVMVLSIVVLVLIPLSF LLVALAQQVPRGVQAAAAWLKDPLPILQAVQSIPYAGDWLYGELVSAIDPQTFAHTMQRI LEPLSTWVLNAAVNVGSGVMQLAFVTFIVFFFYRDGSWFADRISAVVERVSGGIAEEITK ILVNTTRSVVFGIVGTAIGQGLVAGIGFWIAGVPGVLILSFAVCVLSVIPIGPPLIWLPA AVWLWSKGELGMAAFLVLWGTLAVSSVDNFIKPLLIARGTSMPIALIFLGVFGGVLAFGF LGLILGPLLLAVGIALFSAWLKRPVIALANAAEQASAAEQPAAADSEKL >gi|319805017|gb|ADMF01000018.1| GENE 63 72890 - 74254 1357 454 aa, chain - ## HITS:1 COG:ECs2523 KEGG:ns NR:ns ## COG: ECs2523 COG1760 # Protein_GI_number: 15831777 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Escherichia coli O157:H7 # 1 454 1 454 454 610 66.0 1e-174 MISAFDIYKIGIGPSSSHTVGPMKAGAAFLSELVEKNLLEQTARIQVDVYGSLSLTGRGH HTDLAVILGLEGYLPETVPLEEIASIIKRVEQDERIDLGRRHEAAFLRASGLVFHAEFLP KHENGMKISAWDDAGRLLYSNTYYSIGGGFIVDDAHFGLEPQAEKPVPYPYKNAAELLAA CERTGLSISSLAMENELVFHTREEIYAHFARIREVMEEAIARGIHTEGLLPGPLRVQRRA PSLNRALESTARLSVDPMAVLDWINMFALAVSEENAAGGRVVTAPTNGACGVIPAVLAYW AKFIGEPKPEPCLRFFLASAVIGGLFKRNASISGAEVGCQGEVGVACSMAAAGLAEVMGG SPSQVAMAAEIGMEHSLGLTCDPVNGQVQVPCIERNAIFAVKAVNAARMALRRTSAPRVP LDEVIKTMYETGKDMNAKYRETSRGGLAKILRCE >gi|319805017|gb|ADMF01000018.1| GENE 64 74492 - 75760 1751 422 aa, chain - ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 7 422 8 432 432 350 52.0 4e-96 MGITEWVAVLVIFAVVYCLIKRYETRLVLIGSGLLLCLISWNLVGGLNAFAKSMTNASLV MAICGSMGFAFVAKYTEADRSLVHYLSAPIRGLGIFLVPVCTAITFFVNIAIPSAAGCAA AVGSTLIPVMLRAGIKPAGAAAAVLAGTIGSYLSPGTSHNPYVANMAHIDVMEFIGFHAP YSIMIGAFGVIGTLIMCILLGDGKGDKNAKIDESKAQKTDDFTPNPIKALVPLVPITILV VGNLWCPFIKMGVAQAMVLGAVIALAVARPNPETFTKEFFNGCGKGYADVMGIIIAAGVF AAGLREAGLIDVFVQSLKESNEIARWGGSIGPFIMGVITGSGDAATLAFNETVTPHAEDF GMSIQGLGGLAFLAGAAGRTASPLAGVTILVSGIAMVSPIEVIKRTALPMLAATIVCALI MV >gi|319805017|gb|ADMF01000018.1| GENE 65 75900 - 76484 580 194 aa, chain - ## HITS:1 COG:VC0341 KEGG:ns NR:ns ## COG: VC0341 COG1949 # Protein_GI_number: 15640368 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Vibrio cholerae # 15 194 2 181 181 216 57.0 2e-56 MTTEPCANAIERDPSYADDNLIWIDMEMTGLQPEVNRVLEVAAIITDKNLNILHEGPVVA IHQPKAVLDGMDAWNTETHTKSGLVARCLESTVDEEKCAQIFTEVFRRYVPEGKSPMCGN TIGQDRRFMARWIPGMERYFHYRSIDVSTIKELCRRWAPEKVWVGTCVNKHQALADIAES IHELSWYRQEVFRI >gi|319805017|gb|ADMF01000018.1| GENE 66 76712 - 78304 1198 530 aa, chain + ## HITS:1 COG:RSc0941 KEGG:ns NR:ns ## COG: RSc0941 COG0501 # Protein_GI_number: 17545660 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Ralstonia solanacearum # 11 423 7 415 418 121 27.0 3e-27 MQLSANNIEHILLISCALYVFVECFACARQVIAAERGIGKVPTGFRNKLSLAAHQKAAAF TSESAQSRLVLAFVSAAFAVLMTTGHGLTYLTALFETLTDNTLLVQWSLLVSIMGLMVVV SLPLEWLIRYRLRERFGYQRRSRKEWFKRTVGISTAGLAAALPATALLLILCEVTGPYWW LLLWMLYLAWLFWRWRLSLMRGQLWSRASRPIQNEALRRKVRSLLAEEGFRMEDLVIMTR PPAWKYAHVLLPGSGELRRVVVFADTAAKLTEDELLAVIASQAARIKFHHGPWRIALSAA GGFITCAVLGWAANTPVFFEGLGFSPILTVMQPGTHAGFAMAAAVIAFPIVFFPLRALNN FIIRQLRYAADRCGAAKMGGDTLARALAKLHRDYTNTLTPSRFYSVLHYDHPHAAMRVAH LLKYMRARKLEPHLADPAPALPTVLSQEQAITRALRRERTSFNAARREAEEALTQELLTQ HDWVDDDGFEDDPSKTGKSERPTPKASISMPDVPHIAAVTPAASSPSQHG >gi|319805017|gb|ADMF01000018.1| GENE 67 78297 - 79244 865 315 aa, chain + ## HITS:1 COG:RSc0940 KEGG:ns NR:ns ## COG: RSc0940 COG1162 # Protein_GI_number: 17545659 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Ralstonia solanacearum # 4 303 8 305 318 228 42.0 8e-60 MAKRNSSGRRPASAAQPETLLFGRVTAGHGRHYVVTLDTGEQLVAHRRGKKGDVAVGDRV GCTPPVSGIAAIETIEDRRTLLYRSDEWRVKTLAANADLCAVVFAPRPTFNPWFIWKALL AAHQAGIPAVVIRNKLDLSDGRAAADQQTALLRSIGAQTIEISASERPDEARAKLLEVFT GKTVLLVGQSGMGKSTILNLLVPEANAQTREFSEALDLGKQTTTAAAWHAAPEWQGAVID TPGFQEFGLAHLSLSDILRAMPDIAEHAVGCRFFNCRHLHEPGCGVKAALEAGLIDPARY AFYEAAAKDADPLPR >gi|319805017|gb|ADMF01000018.1| GENE 68 79406 - 80575 1047 389 aa, chain + ## HITS:1 COG:RSc1039 KEGG:ns NR:ns ## COG: RSc1039 COG2896 # Protein_GI_number: 17545758 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Ralstonia solanacearum # 45 389 25 373 373 399 57.0 1e-111 MITDPTLSSTHPKPSAPKATKVIRITPRPALPIPQSGPVMRAPRPDGLPGTRWIDRLGRP LTDLRISVTDHCNFRCRYCMPKEKYAQNHNFLAMTELLTFDEILRVSRIAVANGIEKIRL TGGEPLLRKGIENLVAQLAALRTPAGKPIDLAMTTNGSLLIKKAQALKDAGLGRITVSLD GIDEDIFQSFNDVGYPAAKVLEAIDFARQVGFKVKVNTVVKKGVNEGEILKICEVFRGTG VTPRFIEYMDVGNANDWRMDEVVPSREVVARIAQRWPVESLSPTAPGETAARWRYLDGGG EFGVISSVTRAFCRTCSRVRLSMEGRLYLCLFASIGCDLRTMLRGGCTDSELETAIGRIW SAREDRYSELRSMGAAPSRQKVEMNYIGG >gi|319805017|gb|ADMF01000018.1| GENE 69 80858 - 82348 1906 496 aa, chain + ## HITS:1 COG:PA0783 KEGG:ns NR:ns ## COG: PA0783 COG0591 # Protein_GI_number: 15595980 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Pseudomonas aeruginosa # 3 493 4 495 506 589 65.0 1e-168 MFSNPTAVTFIGYLIVMVGVGVFAYYYTRSYTDFILGGRSLGGFVTALSVGASDMSGWLL MGLPGAVFLFGVSQSWIAIGLILGSWLNWRFAAARLRVYTEKAHNSLTLPDYLTHRFEDK SNALRIIASAVILIFFTIYCASGVVAGARLFENTFHMEYETALIIGAAATILYVFIGGFL AVSWTDTIQAAIMCVALVVTPIAVMYDAGGFSATTARLAEINPSMLNMMEGQTVIGVISL LAWGLGYFGQPHILVRFMAAKSIKVIPNARRVATLWMLFCLAGAVGVGFFGAAYFSLHPD VAGLVKENHERVFIVLSSLLFNPWIAGLLMSAILAAVMSTLSCQLLVCSSTLTQDFYRSF LRPKATQRELVWVGRAMVLAISVVSVWMASDPSSLVLSLVSYAWAGFGAAFGPVILISLW WKRMTRMGALCGMVVGAATVLIWNHFAWFGLYEIIPGFLFASIAIYLGSMLDRKPDGEVT ETFDAVEAEVKAAGVR >gi|319805017|gb|ADMF01000018.1| GENE 70 82639 - 84243 2072 534 aa, chain + ## HITS:1 COG:ECs0909 KEGG:ns NR:ns ## COG: ECs0909 COG0747 # Protein_GI_number: 15830163 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 24 533 10 512 512 434 45.0 1e-121 MAVQYFSRSARTRTIRLSSVFAIIAAAGIAAAGSINVQARDLTAAVNSNFSSLDSWDTID NLSRAVSGSIYEGLYRFDTNLTPQPQLAESYTVSDDGLVYTFKLRPNVKYQDGSDFTAET VKMNFDRGMNPASKLSRRTFFSFVDKVEAVDPLTVRFTLKHPTAGFIARLSNGTASMICP SLLKKAAAAGDAAAAKKVTAYEACGTGPYMLKHFEPTEVLEVVKNPNYRVAGLPKFDSLR WVPVAENSTRAMMLRTGEAQFIWPVPAEQVKALEADDKLSIQKTPSVVTRYISMNETKKP FNDVRVRKAISLAINRNALIKVAYNGLAVPSTGYLPPQIEGAVNYGAFPYDPKAARELLK EAGFPDGFHATLWSAYNDGKTLKTLQFLQQQLAQVGIHVETRALEAGQRSLIYSAQTPAD SQHQLYLIGWTNSAAEPDRGLRPLLDSRSAPPVLNNDSYYKNPKVDELFDKAAAEPNPQK RVALYKELQDTVNADSPWAPLVFEMMTAGAVKPLKNFAVLPDGSFDFYQADWQE >gi|319805017|gb|ADMF01000018.1| GENE 71 84439 - 85698 1351 419 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNTNPLVAQLIKLLPFLGRNVCYSDRELAMKRFRRMLAEQPNAFLDAYDAAIAEIRKIY PHESADLIDSAALSELEDQAVAETKSDGTTIAVYAAGFFAYGLENQSLASELLEPEDGEK LRELLYREYFDESNAQIRIYEHLIPLNHLIIANPDESQRFLEVMATAKSHFVPTAPSVDY PGVSANYDEEDDSDIAARFRVVLFTVKQKDASKPMQKTPFRFNGFAVPKGENISLSNDMI LATPWGAEFSALISRRCGRGLRYAVTEPYLLNDTVRQLDYVVGLKRVMVAFTRTALDANV NPEDLIVSFGAFTDPVRGYSELRVAFALPSAPDELINGVPIPLPSPMTEQSAEELAKLVR ASFEFEGIRFRHPVGELCPLLVAEPDSMDRLYNSIHNLQRPLIKPDSTPKPSIPSMLLN >gi|319805017|gb|ADMF01000018.1| GENE 72 85913 - 87406 1570 497 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 7 491 9 477 484 232 34.0 1e-60 MNEKTISRRSLLKLASASTVTAAAVLPSAVRAAQTDQWDETYEIIVVGAGGAGMAAAVKA AQKGAKHVVVLEKLNFPGGNTLISQGFINAADPVRQPKQGIKDSWQHHAEQTLEAGDFRG QKDRVDVLCRNAYPTIEWLESLGMQFKPKVIQIFGALYPRSHVPALPKGQGYGTVLSKAA KELGVEVRTGMGVEEIIREKPFEGDVLGVVAKNAKGEIKRIRATRGVVLAAGGFSANKYL RELHDPRVAGLGTDNLPGATGEVAMAAVRVGGYLVGMDFIQSTPGAPAGKKMKLLLNFNV NGSIYVDKRGARIVNEGARRDVIRDAVLGTPERYAYTVCDNENFTSYDEVNRAAIMKGIE AGEAWTAPTIRELAQKMGVDPDGLEKTIKRYNDVYVKNQKDEDFGKTAVNLTKRIDQGPF WACYTGMTVHHTMGGLNTNVKAQVLDWTGAVIPRLYAAGEITGGIHGTNRVGGNAVLDCF VFGQIAGENASQETIAA >gi|319805017|gb|ADMF01000018.1| GENE 73 87533 - 88198 649 221 aa, chain - ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 208 10 202 218 130 38.0 2e-30 MTQSLPDAAEQVAAAEKESALVRIIDDEIDVREALALMLRIEGWTAKTYPNARAFLIEDD VRRPGCLVLDVRMPLMTGLELQNEMLRRGLMLPTIFLTGHADIDVAVSSLKRGAVDFLIK PVNDEILLESIAAAVHCDFLRRAGVAGGEGVRERLRLLSARELDVLGYFLNGETDEQVAD KLSLSERTVEGHRARIYRKFGIHTAKELALLMPDIKAVWQR >gi|319805017|gb|ADMF01000018.1| GENE 74 88179 - 90152 1015 657 aa, chain - ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 54 634 29 577 592 103 21.0 7e-22 MPLTKRLVFLSLVFSTLLGFPDIDAVAADSILSDRVDAVSGDPTASSSGTKVRLGLLDFE FESSYLSRVEDIQATVLKHLQASTPGIVIEPRYYKTKDLAEAVRKGEVEFFLGSSGFFVE MRPYGVRDIGTIVSSSFPDPNQCVAGVIFVRNSRTDLQTIADLEHRTASATDPRNFMTYQ IGMGEIAKAGYDPDSFFRRTIFTDSKPQKVVENVLSGKADVGFLRACMLEAMERRNPQWQ GKLRVINERTGPRAERLGCRYSTDMYPGWTFAVTSHTPPILTRHVATALLSLDPKSTPSG FEVSFATDYARVNDLLKTLRIGPYAYLREWTLRGFLKVSWPFLMLAAALAFAWILHWLRL ETLVRQRTAELEKAWDRERIAEVQARKAADKLDRMHCVSVVGELSSIFAHELGQPLSVMR YLTRSLGVLMKKPDPDRKLVEECVGGLQKQITHAAEILERVRKYAKQGAKRGQNIDLTAV VRDALSELEESRRLTHAAVLDAPDPVMIQGDPVELRILVRNLLKNADEALCAMPDDERES LLLRLSRLGIAPIRITVKRIAVQERAELSVENSGSVLSSEALSRLTESGRSEKENGLGLG LLICRSIVERHLAKLSFEAIAAEAGGGLKVCVSFAVVDMTHQIHHHSENQKNDAVAP >gi|319805017|gb|ADMF01000018.1| GENE 75 90334 - 91920 1001 528 aa, chain + ## HITS:1 COG:BS_pnbA KEGG:ns NR:ns ## COG: BS_pnbA COG2272 # Protein_GI_number: 16080492 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Bacillus subtilis # 47 525 11 483 489 188 31.0 3e-47 MQRRRFLENSALASLPLFSSLALLPGCAVYERNIHSDDRPSADAPAGRFRGVRQPDTGIQ VYLGIPFMKNPYEPVRRFLAPQPMERIADTLDCVKHGALPLQPGPDGVVIGGDGPLCLNI WVPRDATPRSRFPVMVWVPGGGSIRCAQNDERFDGTHFAAHGCILVTLAYRVNIDGFLKI RGGDSNLGVRDIIMGLRWVKDNIAAFGGDPQVVTAFGQSAGGTHLVDVVASPYAQGLLRG AIIQSPSAVAQWRSDAQADRAAEFVAQGLGAEPTRESLAKVPFEKLSDLPKIAGRLAADP EWAKFTDGNVSLFKGWIDQDVIPELPVDALRKGAARKMAFIVGSTSSEWRYYIVPNGAIA KKNRSSAAALIAGANRPETVLEAYARVNRGKTWGDCFAQIQSDLIFRMPCVKLAESLAAG GAQVWTYDFAWKSPVKGKSGASLGAAHTVDVPFVFQNLSAPRAVRTIGERPPQALAQAMH SAWLTFAKTGCAPWTPFSLDTRRAMRFDAKSQEVSDPWAFERLTLPAR >gi|319805017|gb|ADMF01000018.1| GENE 76 92079 - 92945 966 288 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLRRPIVKFLVSALAAAGAALTLLPSAQAADSQLLTALSTCRATYFDAIAKDKNIPESL KIRDGNRAYLKVEKQPLDVVMFEKPFKDSGLTVTGYVFNDEIIRYVGVPDMHTHFWGLIV KEDWKSVVDKLKGIDWEAVDSRHMSAHANRMLRKNDEKEWKAYTHPQNYEYPDLGASERA FHVQPYENQTMVFCGMLSAGAPEEAIIADVRPDLLYGEQKVPIREEQIVKDSEKAKAKTP IEPGAQMPANHPKIDMENLPAGHPKIDGKQELPAGHPDISGAQKPAAK >gi|319805017|gb|ADMF01000018.1| GENE 77 93241 - 95859 1774 872 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 850 5 798 815 687 45 0.0 MRQDKLTTKFQDAIGSAQSIALAHDNQFMEPLHLLAALLADTEGSTRSLLERAGVNVGRL ERDVKDAVDRLPKVTGQGGDVQISRDLMNLLNLTEKEAMKAGDEYISTEMALLALTEDKT EAGRLAKEAGLTRRAMEEAIKAVRGTDKADNPDAENQREALKKYTIDLTERARQGKLDPV IGRDDEIRRTMQILQRRTKNNPVLIGEPGVGKTAVVEGLAQRIVNNEVPDTLRNKVILSL DMAGLIAGAKYRGEFEERLKKLLQEVTAQEGKIILFIDEIHTVVGAGKTEGSMDAGNMLK PALARGELHVIGATTLDEYRKYVEKDAALERRFQKVFVDEPSVEDTIAILRGLQEKYEAH HGVEITDPAIVAAAELSHRYITDRYLPDKAIDLIDEAAARVKMEIDSKPEALDKLDRRLI QLKIEREAMKKETDDASKKRLAAIEAEIEKLSREYADLEEVWKKEKSEALGEKSVRDEID RVRRQMDEYRRQAQYEKLAELQYAVLPKLEEKLKRAEKAEKDTEKTEKGGPKLLRTSVGA EEIAEVVSRATGIPVSKMMEGERQKLLHMADALEKRVIGQDEAVKRVTETILRSRAGLSD PNRPYGSFLFLGPTGVGKTELTKALAEFLFDTDEAMIRIDMSEFMEKHSVARLIGAPPGY VGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNCV IVMTSNLGSAEIQEMQGEPQDKIKSAVMQEVRAHFRPEFVNRIDEIVVFNSLDAANVRKI AEIQLEQLRKRMTAQQIGLDVTEAALDEIAKVGFDPQFGARPLRRAIQDRIENGIARLLL EGKAAPGDTVKVGTAGEDFTFDVEKAKAEQSA >gi|319805017|gb|ADMF01000018.1| GENE 78 96047 - 96508 452 153 aa, chain - ## HITS:1 COG:RSc1332 KEGG:ns NR:ns ## COG: RSc1332 COG0314 # Protein_GI_number: 17546051 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Ralstonia solanacearum # 6 151 4 149 176 174 58.0 4e-44 MAITDIRVGEADFSLDEELSRIMRESPSAGGVASFVGLVRNKNDGAAVSRMTLEHYPGMT EKSLAKIAAAARERFHLVDVIVVHRVGELKVGDRIVLCLTSAEHRGDAFAGCEYIMDWLK TEAPFWKKEQTPDGERWVDARESDDKARERWLV >gi|319805017|gb|ADMF01000018.1| GENE 79 96510 - 96767 373 85 aa, chain - ## HITS:1 COG:BMEI1253 KEGG:ns NR:ns ## COG: BMEI1253 COG1977 # Protein_GI_number: 17987536 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, small subunit # Organism: Brucella melitensis # 1 85 1 85 85 78 49.0 4e-15 MKVKVIFFASLRDAVGTGTETVELAGDAASVAQVREALIAKGEVWAHAFRNLKRIRAAVN QELAGDDAVVKEGDEVAFFPPVTGG >gi|319805017|gb|ADMF01000018.1| GENE 80 96810 - 98015 1402 401 aa, chain - ## HITS:1 COG:RSc1330 KEGG:ns NR:ns ## COG: RSc1330 COG0303 # Protein_GI_number: 17546049 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Ralstonia solanacearum # 20 397 32 416 419 379 52.0 1e-105 MITYAEALRLLLSEAKPIEDTETIPLMYSTGRVLAEDIASPIDVPGWDNSQMDGYALRVE DIASASQDAPVRLPVAERIAAGKIGGPLLPGTCARIFTGAPLPPGADTVVPQEDVSREGD VVAFSQTPQIGAWVRRQGSDVAAGSVILHVGDRLTPGAIGMAASIGRAYVTVFRKLRVGV FFSGDELVQPGEPLPPGGIYNSNRFMVRSILQLLGCEVTDLGSVPDSLEATKRAFEHAAE TSDVILTTGGMSVGEEDHIKPAVEALGRIDLWRVKLKPGKPLAFGEVKGVPFVGLPGNPV SGFVVLLMMARPFLLRRMGLKEVDLTPMKIRADFDWLKAGDREEFVRVRRNAEGGLDIYH TQNSQVLSSCAWADGLVDIPSGAVIHRGDVVHYYPFAQFFA >gi|319805017|gb|ADMF01000018.1| GENE 81 98088 - 98612 362 174 aa, chain - ## HITS:1 COG:HI0851 KEGG:ns NR:ns ## COG: HI0851 COG1763 # Protein_GI_number: 16272791 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein # Organism: Haemophilus influenzae # 1 161 15 168 178 115 42.0 6e-26 MGFIGRSGSGKTTLAAAVLRILAARGWRVCAVKDAHHHIDLDTPGKDTWRYRESGASRVI LRTPERWAVLTETPEGAPGIDELLKETGDADIVLVEGFKHEGSFPKIEVRRQAAADRPPL VREFGGRINLAAAASDFDEPDFAGVPKLDINRPEETADFIEGLALAAGAKKSAR >gi|319805017|gb|ADMF01000018.1| GENE 82 98639 - 100069 1277 476 aa, chain - ## HITS:1 COG:NMB1046 KEGG:ns NR:ns ## COG: NMB1046 COG0498 # Protein_GI_number: 15676932 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Neisseria meningitidis MC58 # 1 467 1 461 469 357 40.0 3e-98 MLYISTRGAADGKTFADITFEGLARDGGLYVPENYPKFTADELAQLRGRDFSSVALEVLS RFWTQLPQKDLWQLCRDAWQPSIFPNGLDMFKAHDVAPITWLQDGVGIYELSNGPSLSIN DFSLQFLSQVHEKHWDKGPRSITLLGATTGDMGASAEAAFGGHSDVKVVMLSPKDRMSKF QAAQLYSNKDKNVLNIEIDGTFDDCQALVRELLSDEAFCKEAHLGAVNSYLWLRIAVHVA AFFYGYIQATSFNTEPVVFVVPAGNFGNAFAGWVARAMGLPILRILVATNENDAIDVFFR TGVYAPRPVSETVATSSPSMDISRAASFERFLFEVLGRNGERIAELMTELETNGRFELTK EEFNKIRRSGLAAGTSDHPNRLEMIESLWVTNHRMIDPQTADCLYTGTYLHPVGVKTLCW ETVQAVKFPRITKQATGETVPLPERFNDIFERKQKKTPLPADIAAVREAVAAFAKE >gi|319805017|gb|ADMF01000018.1| GENE 83 100466 - 102388 1555 640 aa, chain + ## HITS:1 COG:RSc1316 KEGG:ns NR:ns ## COG: RSc1316 COG1875 # Protein_GI_number: 17546035 # Func_class: T Signal transduction mechanisms # Function: Predicted ATPase related to phosphate starvation-inducible protein PhoH # Organism: Ralstonia solanacearum # 62 640 2 572 572 572 54.0 1e-163 MPLPKAPAHPAEILEDYGTPATPESERKLPDVKIVNAMESHPAAAVKTGKRRNVKAARSA EPLPATPASKTAKTAQAPLTEPLSKKSVSKKLKAAQKSELAASPAIADVSAKSSAKPKRA AAPAKPALAPKAADTAKKAKSAPQKAIKTPAPSTKTQPDYAADRRRSGNAGRRGRAQMPD NLPKLFVLDTNVLMHDPLSLFRFAEHDVFLPMTVLEELDTHKKGLTDVARNARSVSRALD QLIEANGGRIQEGVELSLLGNTEATGRLWFETKPLAEELPAELPSFRGDNSILATVRGVA KAFPKRAVVLVSKDINMRIKATTLGIPAEDYFNDKVLDDTDMLYSGKLALPSNFWESIDS TLKSWQDQNATFYSFESEHPEDFILNACVTVEGDANFMALVAARQGRTVTLRLMRDYRSK SHIKVWGIQARNAEQNMALNLLMDPDIDFVTLLGQAGTGKTLMTLAAALTQTIDERRFSE IIMTRATVSVGEDIGFLPGTEEEKMAPWMGALEDNLEVLHGSSSGGDWGRQATMDLIKNR IRVKSMSFMRGRTFLQKFVIIDEAQNLSPKQMKTLITRAGPGTKIVCLGNIAQIDTPYLT EGSSGLTYVVERFQGWQHAATLTLTRGERSRLAEFAAEAL >gi|319805017|gb|ADMF01000018.1| GENE 84 102527 - 103312 942 261 aa, chain + ## HITS:1 COG:RSc1744 KEGG:ns NR:ns ## COG: RSc1744 COG0760 # Protein_GI_number: 17546463 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Ralstonia solanacearum # 29 238 20 226 255 117 35.0 2e-26 MIKSKLVLALALSVGLVGSAAAALTDMTVNGEKVPASRLEAVYNNAVKAGAKAGPELEAR VKRDVTEEVVLLQEAAKAKIDRTKEYRDAIDRVGKQLKVELLVADYAKKNPVSDKEVRAA YDNAKKVYGDTEYQVRHILVKTEQEAKNIIQRLNKGEKFDALAKSESLDPKSGPAGGLIG WLSPSNVEPNFGNAFKILSAGDVAQAPIQNQFGWHVIKLDAKRSQKNFPTYESQKDSLRA QLSQLNAKRHFAELVQKAKVR >gi|319805017|gb|ADMF01000018.1| GENE 85 103465 - 104700 758 411 aa, chain - ## HITS:1 COG:lin2274 KEGG:ns NR:ns ## COG: lin2274 COG0477 # Protein_GI_number: 16801338 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 1 405 1 399 407 192 34.0 7e-49 MTLDQKRWLLLLVSCIINLFAGSIYAWSVFASPLAERIGSLLQTSLTSADLAIAFSIANA LGPIPMIFGGLINDRFGPKFVIAAGGISMGFGLYASGNAESVSELIVFYGLFFGTGLSLV YGCTINNTLKFFPDHRGLVGGLATAAYGISSVLVPPIATQLISVYGITNALEIMGVFIGG VIVIGGFLSMRCPVGFTPSMAVEKQCVEIGRNYTWREMLRDARFLPMITLLTCGATAGMM VISQSFFIARHQIALDVASAAMAVSCMALANTFGRLCAGTASDYLGRLPTLGAGLGIAII GLILLALGSPANTLPFYCGLIALGFSFGCFMGVYPGFTAQVFGARHNGVNFGIMFTGFAL AGILGPTLMQLLSAMGFSETGHYCAAGTISALGFVMMFLYRKAERLRIRSK >gi|319805017|gb|ADMF01000018.1| GENE 86 104750 - 106243 1143 497 aa, chain - ## HITS:1 COG:SA0821 KEGG:ns NR:ns ## COG: SA0821 COG0165 # Protein_GI_number: 15926549 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Staphylococcus aureus N315 # 33 385 40 393 459 132 24.0 2e-30 MLGMHMGRVPAPSAREESGEIHRLDTYDWLQMINRASIVSNVEEGLLEKPLARRILTALN TLRDEAAKPNAVRPGLYITFEPEVLKLVGMEASVLHVGRSSQDILATANAGLNIARLMRL LDAIHEVDCALLEVARREDGALVPAYTNGVQAQPTLYSHYLLAQHQVFMRDAARIFECIR RYDVSPMGACVCNGTGWPLNVERMAQLLGFSRPLTNAFDVGQCAGNDLPLEMSQIISAVM LHVNAFLADFMVQYADPHPWIRWESANGLYCSSAMPQKRNPGLINDCRRDAGLVIGEAQG VMLRIQNLQLGMADVRDAQVLEALADDACITLRTFAGIVRELVVDRKRALAELNADWTCT QELADRLVRCRVDFRNAHHFASHLVTRARAAGTTPPELDYEEAKSLWLEWRSTLQNACDI PDSFPLSEKAFLGALDPAGIVAARATVGSANPELVAKGILRAQQEAARIKAEIDALVDHA KKTAFVLEEALARVLAD >gi|319805017|gb|ADMF01000018.1| GENE 87 106387 - 107598 905 403 aa, chain - ## HITS:1 COG:RSc1084 KEGG:ns NR:ns ## COG: RSc1084 COG3203 # Protein_GI_number: 17545803 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 80 378 53 327 364 64 27.0 3e-10 MKNHRIQRVLIAAFCSTVFSASASDIQMFGFFDQGLAYLHEDLNAGMGGPAGQSINAPQY VDKDGYVAEAQTKRSFTQGSGNVSTWGIKGSEQINADVRVLFHLESGFLADDGTLYGGSV KPLFERESSIGVESKTWGLVKFGRMPALSTGSGTTGILNSKVNPFGAGWGNMTGGWKFAG TLAAARHDNMIHYISPSFSGVRLHAQYSFKSAPDNGREGSSETNRWWAVGASMEGGKYYL AATVDCLDAASSAPKPEATYANDAYKVFVGGHYNFDVFRLFGTVQYLKNMPWIGGYSTKE VAPLALGSKGPQKGFEAWAFSTGVDFRAVGGKIMTSVGYATAKNQNLESQNKLNRVNFGL GYQYSLSKRTSLYGIGGYFWQDADWQKKEISAHEFIVGMMHRW >gi|319805017|gb|ADMF01000018.1| GENE 88 107629 - 109014 1196 461 aa, chain - ## HITS:1 COG:no KEGG:Amet_1883 NR:ns ## KEGG: Amet_1883 # Name: not_defined # Def: amidohydrolase # Organism: A.metalliredigens # Pathway: not_defined # 1 451 1 458 471 303 37.0 8e-81 MHDILLRNALIADPEADSLRTGDVAVEGGCIVEAIGSACTTIDCSGLVLQPGIIDTHVHL GINPLSYGMVARAGVTTALDMSGPIEKLLDEFSCANVGINVAALNAILPGRNISGNNPDR EQLRNFINLSRRSGALGVKLLGGHFPLTPEASHRMVETADDSHCYMAWHVGTTEKGSDIE GLLEAAEIAAGHPLHLPHVNAYCRGRVRPVLEECSIAEKVILEHPEFTTESYLSARNGAP LDCDAAGKPRSAITAGTLTRFGFESSASGIEAAIRAGRLAVLFPNQSEITLLTGTDAVAY LRAHREHCDGSFDGVNPLESRVFFASQKRPDRTFLVDAISTDGGGIPRNVILQNGLSLVE LGALTTIEFARKTSLLPAQMLGLKNKGRLLAGMDADLTIYDPTSHQAVYTIVNGRFVLLN RVLQTGTGTLLTTYEGTQAAQNRGLKTQVVSGIVPLLHRSL >gi|319805017|gb|ADMF01000018.1| GENE 89 109045 - 110328 1261 427 aa, chain - ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 7 427 8 432 432 257 41.0 4e-68 MTWQIWLAIASIVFIVFGLVKRLETRMLLIVAGFILCCASGAPMKAFGAFVKGMTNITLV PAICSAMGFAFAVQASKCDQHLVAAVAAPLKKLGGLLIPAATILTFLINIAIMSAAGTAA TAGATFIPLLLRAGIRPAAAAAAVGGGTMAGLLLNPGCAHDIYVAKMAEMDLMAFIIWAA PYIVGLVLLSVIVNSAIMIVKNKDHLAGAEAKDAAAKSDAGQQESAFKVQPLKAVAPLVP LIVLLVASISFPKAGIDVVAAMLIGLVFISAVTLMNPGEISKAFFKGCGTGYAQVIGLIV AAGVFAAGLQATGAVTAFIEFLKGSNEFARWGAAFGPFLMALGTGSGEAAIWAFNQSITP EAAHFGMQSHSLGLLAILAGQFGRTASPLAGAIIIVAGMASADPLAVAKRLIPGMLVALI ASAFILV >gi|319805017|gb|ADMF01000018.1| GENE 90 110628 - 111584 535 318 aa, chain + ## HITS:1 COG:PA2877 KEGG:ns NR:ns ## COG: PA2877 COG0583 # Protein_GI_number: 15598073 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 5 300 2 291 297 122 29.0 1e-27 MARTDDLNVWRIFCEVVQAGGVNAACDVLECEPSTVSRALKAIETEIGAPIFLREGRHLK LTELGARAYDKAIKLLNVHELMIQNLKGDQNALSGTIRLASHSGISSIEITPHLIEFRKT YPDITLELHDLTKQIPEIFHLADTPPIHLAAGYGPNRPIDGLVARYLGEMPFLCCASPLY LERFGAPHHPSECVNHIGILINSPTRVATQELIRDGIAYPLRWKSSMSFKNLMAVRTAAV LGAGIVPDLPLFHAVEALRSGQLKTILEGWRCPPASCFIYATQEAYEKRRVRILFDWLAE CEQKTLDKLRQEFPQFYG >gi|319805017|gb|ADMF01000018.1| GENE 91 111756 - 113972 1338 738 aa, chain - ## HITS:1 COG:ZrecD KEGG:ns NR:ns ## COG: ZrecD COG0507 # Protein_GI_number: 15803338 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Escherichia coli O157:H7 EDL933 # 152 728 106 601 608 172 31.0 2e-42 MDKSMMPNADSTYELPQGGIAGLGAVLLRAAERIGTVTEAARQAMMGLTLAFANAERQGS VCVRALDAVKGLMPDAAEAAEGPEETEMRLAQAFDVLKTGLKDLQALGLAQNFQDFISAA GTRLGKTSDETAPTQPIAPLIVDEAPTFAQTRIYFARLALEELLLARTLARFAAADEAFS VSESGQPDDALIAEVTGRAHADEQQRLAVSTALKRRLMVVSGGPGTGKTTTVAQILECLL RKNPTLRIALAAPTGKATGRMQQSLESSANNAAKGLSALRAVLQHDALLLDAEKQIRSRT IHKWLASPTTAGSAPGIGNPIPADVLVVDEASMVDIHLAVRLMRAVSPEARVILLGDKHQ LAAVGPGAVFAEISDGKGALARMGAVVELVKSWRFGKDTPIGQLAAAINHQGANAGLPEA EVFQNVLAAFASAGANADKSLQSASLHTAGLMELQKGVFTSKATDEQKREREIFSRTGLT APVRSWLNRELEGYASVLSECRAAYLAGTTKEQWESLRQKLWLCLSGFRALAAQRHGAMS VQAVNDYADQRIRSVWPLSEGAFGGGHYPGEVIIVRRNDEGLGVHNGDVGIVLPKLLELD TPTSDLEDSSAVVGDEDAGDSPERQDRPDRQGPAVSFTVYFGDTNLELPVALLPQFDVAW AMTIHQSQGSEFERVAVLLPVKRTSELATRELLYTAVTRTKRTVDVFGSEAVLRRAVEKP TVRDGSLGRRLELFCEMQ >gi|319805017|gb|ADMF01000018.1| GENE 92 113984 - 117559 2066 1191 aa, chain - ## HITS:1 COG:STM2994 KEGG:ns NR:ns ## COG: STM2994 COG1074 # Protein_GI_number: 16766296 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Salmonella typhimurium LT2 # 285 1189 332 1174 1181 298 30.0 4e-80 MAKKDKALCAEIPAEHLTAETDWTQLCAEAESVSADEQTAAYLEADEMDFASDAGEAPAA DSSDDSSFDMLRAPLMRPTLLEASAGTGKTFSIKHLVLRFVAEEDVSVSRMLIMTFTRAA TAELKARIQSHLSAMHGLMTGTFADSAVDAVLLEQRALWAEQGRDPAVIVSRLRESLAQF DNAGIFTIHGFCQKVLEDRAFTSGSSIGFELVENVDDLVEEVVNEFIRTSLLQLSEREDR AAISDPEKWIEILKQLMAAPEDLVPSTIVSLPESPELAAAFQNFVKEAPKRLAQKKCEAR VKTFDDLLIELYERLRGDPADAESRAQAQRLAESIRSAFSVVLVDEFQDTDPIQYAVIKR LFLRKREPHPVWFVGDPKQAIYRFRGADLETYLRARRDVEALYQTAGSGRFRGVYALTTN YRSSPDLVRAFNAFWRTAPNPFLREDLAYLEVKSSPKNLPLMQKRPDGAIMDAVPFEWVS SWQETPAQTAAERRQQQGIVLTDRITAMIEAGRRGELLVPCADEEASLAVAEKDGKRLRG VLPGDIAVLVRTHDEGLTAAEVLKHRGVRVQIRCDQNVCNTIEACEIGMILSAFAAPGDL KLLRAARTTRLIGDDLACLDDQERDETRRIALRGEFEYGARNWGTVGPAAALERLMTFCR TAERLLPQANGERTLTNYRHLLELLHGAARIIPTPAGLAAWLAAEAKRPVSDFNRERLES DANLVLVETIHSSKGLQYPIVFLPYTQSGSIGTHARCTSRTDDPKRSAQRCLEVRFEAEK PDQRVNQAEYEEKVRVMYVAMTRAARHLCIIGEQRIKSAVNPDQWHSSTAQAHLFRALTG QLTPSRADILPAVERLAGLQSSSGTPLFRFTELGAAAAGAQSSLLTQGTVGESYTTAQSQ TRRSEWRTSSFTGITRMAEDDGPGFSTWYGQAEKPPLVDDILSFPKGAQAGTCLHEMMER ADFSLMASDDEKAAAARLALTVREVEKHLSLPEKEAASAAAGAAAMIRDLLNAEVAPGVT LKDVPKSARSAELEFLIPISASLTAERLVSELKAMDPKYDFGTLRPEDLKGFLTGFIDLA FSAGGRFYVLDWKSNKISPEASGYTEKAMSAEMDVHLYRLQYLIYWVALRRFLQVRLGAH WRDEMIGGAIYVFLRGVRAGTTTAANPQGIVFDPVRPEVIRRMDDLFAGRA >gi|319805017|gb|ADMF01000018.1| GENE 93 117568 - 121248 3132 1226 aa, chain - ## HITS:1 COG:VC2322 KEGG:ns NR:ns ## COG: VC2322 COG1330 # Protein_GI_number: 15642320 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Vibrio cholerae # 48 967 35 876 1148 172 25.0 5e-42 MIHTIYSNSYEVLRAVLLNNIDALRLRPEAESLRADECFAGVFDRVPVIIPSKAVETDLV RAIAKQESVCASMRFMFLSEWLGFFSREPLANVIGNEARWMIWRELRATGPGSLREAVRT RTTRLEDSLKNRSDHDLLLLAQRIAGVFVAYSSYRLDWILAWLGLHQGRLHPTPQAKREA AALAEDEDAVWQRELFRRLARSKRWRGRGFLEHLPESLQALADAPANARTLVLGDGREVS LPNALHVFVPFVVPPLMLPVLKAYAHSGREVWLYLLNPSSEYWFDLVPRRLYDWKHRDET AGQAEVGHPILADNGRSTRANIDRLWRFTQERGDLTEFDEDDDDARKRRQLPVETHSRKL LDERDFLRQYLSDPKDLRADLTLDTQSIYIEANEPTLLRRVQDSILNLSPDLLSLTARQQ AADAGAPELFDEADDSLRFVGAPSAARELEGLVDWLQAQFQADPTLTPSDVLVVTPDISA AAPLIDQVFGSLAPERRIAYRVCGAVSADSDVPLAVLIGLKNLLIGGFTREKFVEWLSLP IVSEKFDLESDDLAILNRWLAAAGFEVGLNPAHLDAQRDAQAADPRQTQVYAPAALHELT LERALERLAFGWMLPQDEDAAPYGDVLPVVGTELGGWDATGEKSGLLLKLANLYAVLETL RLKTAEGEKLTDGTSAHFWTLWIGEMLQKCFPAETPQRDWLAIRRAAADLADEIAQARDE AERIPDVSFEIFIAALEERLKRGETGAGRPGNTVVFSGMRQLRGLPYKVIVLWGLNEDSS FPGASHAEEFDLMKRFPRRSDRDSRTDNRNIFLDLLLAARSKFLISYTEGANPAQWKEPS VVAQELREWLLTFAQEPSDRLRASAILTHHLPLNAFSPKSFSAEEKQWQSTNRKMLEAVD KAAAANWNGPAAPWANALTARAEGGRLPVKELYRWMRNPAEAFLKRHGIRLSTGEEIDPA PILQRDKDLPKWQRIHTLLHVMLSAGAEGADQAVETLGARWAVDPRMGAQGLRDWRYSDD VVCARTAASLYWKLTSQMTALAPQEAAAAVPGFPWTLTHAASNLWRDASGAVHWINVVPG KITGSGAIQSLFIWALLRAAGAAAEGQIIVTDVEKKASPLIGAPQWTPQEAQTFLGYFLK LYEAFQLGRLPFAVPPYQPKSRGAEAEQMPAERALPNAIVWRGLDQAQAEAYAERLEKAL EGLYKAEDLSALESVVQEMLTDAGSL >gi|319805017|gb|ADMF01000018.1| GENE 94 121476 - 121985 660 169 aa, chain - ## HITS:1 COG:NMB0932 KEGG:ns NR:ns ## COG: NMB0932 COG2839 # Protein_GI_number: 15676826 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis MC58 # 18 167 9 158 162 80 34.0 2e-15 MEWLTSLDWFALSCWFGAIVLIVLGFAGTIVPAIPGLPMIAAGGWLIGWADHYEKVGFWT IAVLIVLAVIGVVVDSVAQTAGAQRAGASKAGIVGSIVGTVVGIPMGLFGIFVMPLVGAA VGEFWAKRDLMHAGRVGVATWVGMIVGTAVKVALAFTMTGYLFFIYLMN >gi|319805017|gb|ADMF01000018.1| GENE 95 122033 - 123430 1617 465 aa, chain - ## HITS:1 COG:RSc1311 KEGG:ns NR:ns ## COG: RSc1311 COG0305 # Protein_GI_number: 17546030 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Ralstonia solanacearum # 7 452 16 460 473 488 56.0 1e-138 MAEENIDEAAQAVRRPPSSVLSEQAILAGLMIDNSALDSVVDIIRPEDFYRRDHRIIFEE IVQLLQEGHPADYLTVFESLKSKGIENDAGGLPYLTELVGSSPSAANIRRYAEIVHDKSV LRQLITVGDRIVTNALAPEGRETREILDEAEKEVLAINERNARTQRGFQPLVTLVRDVSA RVIELYNTKSTSEVTGVSSGYPNLDHVTAGLQRGDLIIIAGRPSMGKTSFALNIAENVGV DQELPVAVFSMEMGADQLAQRMISSVGRIDAQKLRKGQLDDEDWDNFTAALHRLEEKPIY IDDTPGLTISELTSRTRRLVNQAGPLGLVVIDYIQLMSGQRRSNQDNRAQELSEISRGLK SLAKELGVPVIALSQLNRSVDSRTDKRPVMSDLRESGAIEQDADVIMFIYRDVVYNKETV DKNLAEIIVAKQRNGPIGTLRMTFLGGNTRFEPSADAGYWGGIEE >gi|319805017|gb|ADMF01000018.1| GENE 96 123648 - 124097 471 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|221068652|ref|ZP_03544757.1| ribosomal protein L9 [Comamonas testosteroni KF-1] # 1 148 1 148 150 186 63 6e-46 MQVILLEKITHLGDLGDIVKVKDGYGRNFLIPQGHAKRATKQAIAEFEARRAELEKAQAA RVAAAEELAGKLNGAEVTIASKCGVDGRLFGSVTNADIAEAVDKLGFQIKKSQVRTPLGA IKATGEYVITIGLMTDISADVTVKVVAEE >gi|319805017|gb|ADMF01000018.1| GENE 97 124117 - 124389 366 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163857367|ref|YP_001631665.1| 30S ribosomal protein S18 [Bordetella petrii DSM 12804] # 1 89 1 88 90 145 82 1e-33 MAFGAKGKGKPRRSNQQNSLFKRRKFCRFTAEHVEQIDYKDVDTLRDFIQENGKIMPARL TGTQAHYQRQLDTAIKRARFLALLPYTDNQ >gi|319805017|gb|ADMF01000018.1| GENE 98 124394 - 124681 200 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTPLFEFCDVYRQTAGSHRLGSQKPLELDFCANLHSVQSSGKCPVGHRVEVELKLADLAR FDHFRAMMQDGFENFDARGSKPHRFPLYQCSGKID >gi|319805017|gb|ADMF01000018.1| GENE 99 124724 - 125110 471 128 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17546026|ref|NP_519428.1| 30S ribosomal protein S6 [Ralstonia solanacearum GMI1000] # 1 121 1 121 122 186 70 6e-46 MRHYEICIVVHPDQSEQVPAMIERYKTLVAEQGGKIHRIEDWGRRPLAYPIEKLVKAHYV LLNIECGHETILEIENGFRFNDAVLRHLTVKTKHAETAPSPMMKVIEKEEARKVAAEAAA AQEEAAEA >gi|319805017|gb|ADMF01000018.1| GENE 100 125251 - 126222 362 323 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 87 313 23 251 255 144 34 3e-33 MLLIVPFRGALIFTEAFSVKHYDDNSQDEHYEGSGRVRRSRGRGEDFGRERSDRTERSRP ARIRTEAGTVVLAGFHAVAARLKLDPESIQQVYVDPERRDKRMREMREKLFAAGVRVMNA DAARLDGLSPDVPHQGIAAIAAERENTLDFADLLDQITDRTLLLILDGVTDPRNFGACLR AADAAGVQAVIVPRDRSARMTPAAAKAAAGAAETVPVVSVTNLASAIMELRDNGVFVAGT AGETDTTIYDVAQARAFAWVLGAEGEGLRQLTRRRCDVLAAIPMVGSVESLNVSVASGIC LFESLRQRIAAGLVQPGSPDERL >gi|319805017|gb|ADMF01000018.1| GENE 101 126277 - 128637 674 786 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 259 766 229 705 730 264 34 2e-69 MSKKKSKQLPITEVQLTPEQIAQAKEILAGLQKDIQYAAAKKNLVRMMPCVKSVANALVM KLSEEGFEGGEEHWFRHPDAPTATGVVQGARRPSDMKVTPQSVDGTEFSLTASAQVVPGD VVELRQTISGWRPAGLVSRPQRRWVCRCVTDAAAKETEWLLFKPISAFAPIELQVNVQEV PPEVDLERDAVELEISADAPFFAKRREDAYWGSDEEWQIFPAHFVRKVGVMNDPLGEMAI ASAQFGVPIDFSPDTLAEAEKLPEKVDRRSLLHRVDLTDLAFVTIDGEDARDFDDAVYCE ETPEGWRLLVAIADVSHYVRPGTSLDRDAQKRATSVYFPSSVVPMLPEKLSNGLCSLNPG VDRLTLVCDALVNRKGETTAYQFYPAVIHSHGRLTYTAVWSALQGEAWGLNTVGPRLGEL KRLYALYGVLRAARSERHALDFETEESAADFAADGEIIGFHVRDHNDAHRIIEECMLVAN VCAAQFAIAKKQTTLFRVHGEPEQTKLNDLKSILAGFGISFKLKGSENLAPVLAKLIEDT KDKPYLQTAILRTMQRACYQPENIGHFGLQYPAYAHFTSPIRRYPDLLLHRTIKGILSKR SYTPAVEFDDAELMTGYHARKLGSNPEAKPSGAAKPLSRQEAKKAVWTRLGIICSAAERR ADDASREVMKFLKCQYLLSADQKPFQATVTGMCPAGIFVTLSDMPIEGFVHISQLGWGYF VYDPAKQTMTSHEEMTEIRLGDQLTVRLEDVDLKERRINFTLLSNQSRRHPAKGGGRRRF DDDFWY >gi|319805017|gb|ADMF01000018.1| GENE 102 129038 - 129931 744 297 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 5 297 294 584 584 201 37.0 3e-50 MKDAGFDFSKVILVTDRGYQSLINIQKQIDLEVKFIQGIRLSEDIVKRSFDRYDASLHNQ RFYDTGERVYAHSATEAWKQYTDYGSLNKTLHLHLYRFPKADEAEMEELRLQVQQVLDLK NANRQVPPEKWLTYKRFVCERTTAQGRRYWDRDDNAIEAALRYAGRFAIRTNAEANPFKA LSIYRLRGQVEQDFNQFKNWVDGNRLRCTDTAYWGKLLVCTLATSLRMMAIKGAHDREQG NRKIPNNSIDCLFTILKQIQADKRRTANAWVTRTITKKQRDMLALLGLENPPRVLKN Prediction of potential genes in microbial genomes Time: Sun May 29 19:39:58 2011 Seq name: gi|319804966|gb|ADMF01000019.1| Sutterella wadsworthensis 3_1_45B cont1.19, whole genome shotgun sequence Length of sequence - 43055 bp Number of predicted genes - 47, with homology - 35 Number of transcription units - 23, operones - 11 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 699 516 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein - Prom 735 - 794 7.3 - Term 750 - 793 2.0 2 2 Op 1 . - CDS 973 - 2424 1935 ## COG1457 Purine-cytosine permease and related proteins 3 2 Op 2 5/0.000 - CDS 2476 - 3429 1041 ## COG0524 Sugar kinases, ribokinase family 4 2 Op 3 . - CDS 3447 - 4460 1144 ## COG1397 ADP-ribosylglycohydrolase - Prom 4560 - 4619 3.5 + Prom 4527 - 4586 2.2 5 3 Tu 1 . + CDS 4684 - 5208 526 ## + Term 5331 - 5361 1.8 - Term 5138 - 5188 -0.6 6 4 Tu 1 . - CDS 5231 - 6205 784 ## Psta_0517 metallophosphoesterase 7 5 Tu 1 . + CDS 6298 - 6474 91 ## - Term 6316 - 6376 12.0 8 6 Op 1 1/0.000 - CDS 6412 - 6942 717 ## COG2236 Predicted phosphoribosyltransferases - Term 7013 - 7044 -0.8 9 6 Op 2 . - CDS 7050 - 8348 1736 ## COG0104 Adenylosuccinate synthase - Term 8594 - 8622 1.4 10 7 Op 1 . - CDS 8697 - 8900 344 ## 11 7 Op 2 21/0.000 - CDS 8904 - 9782 1026 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 12 7 Op 3 . - CDS 9808 - 11484 1396 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs - Prom 11596 - 11655 1.8 + Prom 11740 - 11799 2.6 13 8 Op 1 . + CDS 11889 - 12365 565 ## COG0700 Uncharacterized membrane protein 14 8 Op 2 . + CDS 12438 - 13553 1069 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 13601 - 13640 7.2 - Term 13588 - 13626 6.1 15 9 Op 1 16/0.000 - CDS 13645 - 14772 690 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Term 14804 - 14859 8.1 16 9 Op 2 . - CDS 14879 - 15130 359 ## COG1923 Uncharacterized host factor I protein - Prom 15304 - 15363 2.3 + Prom 15466 - 15525 2.0 17 10 Tu 1 . + CDS 15582 - 16400 1015 ## COG5266 ABC-type Co2+ transport system, periplasmic component + Term 16445 - 16487 1.1 - Term 16433 - 16473 5.3 18 11 Op 1 7/0.000 - CDS 16502 - 17857 1584 ## COG1160 Predicted GTPases - Prom 17928 - 17987 1.9 19 11 Op 2 9/0.000 - CDS 17995 - 19143 1204 ## COG1520 FOG: WD40-like repeat - Prom 19237 - 19296 1.6 - Term 19247 - 19287 5.2 20 11 Op 3 12/0.000 - CDS 19375 - 20013 925 ## COG2976 Uncharacterized protein conserved in bacteria 21 11 Op 4 11/0.000 - CDS 20068 - 21366 1648 ## COG0124 Histidyl-tRNA synthetase - Prom 21431 - 21490 2.0 22 11 Op 5 . - CDS 21499 - 22752 1131 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis - Term 22782 - 22822 -0.9 23 12 Op 1 . - CDS 22867 - 23970 886 ## Msip34_1717 hypothetical protein 24 12 Op 2 11/0.000 - CDS 23998 - 25200 1270 ## COG0820 Predicted Fe-S-cluster redox enzyme 25 12 Op 3 . - CDS 25200 - 25625 585 ## COG0105 Nucleoside diphosphate kinase - Prom 25648 - 25707 1.7 26 13 Tu 1 . - CDS 25782 - 26912 1070 ## COG0287 Prephenate dehydrogenase 27 14 Tu 1 . + CDS 27132 - 27725 678 ## + Term 27744 - 27786 4.2 - Term 27730 - 27773 7.2 28 15 Tu 1 . - CDS 27806 - 29281 1468 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 29369 - 29428 1.6 - Term 29377 - 29425 11.0 29 16 Op 1 2/0.000 - CDS 29496 - 30437 883 ## COG0739 Membrane proteins related to metalloendopeptidases 30 16 Op 2 . - CDS 30461 - 31258 739 ## COG0496 Predicted acid phosphatase - Prom 31490 - 31549 1.9 31 17 Tu 1 . + CDS 31257 - 31361 60 ## + Term 31372 - 31413 1.8 - Term 31729 - 31761 5.0 32 18 Op 1 40/0.000 - CDS 31767 - 33191 1397 ## COG0642 Signal transduction histidine kinase 33 18 Op 2 7/0.000 - CDS 33208 - 33978 739 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 34010 - 34069 2.1 34 18 Op 3 32/0.000 - CDS 34126 - 34836 760 ## COG0704 Phosphate uptake regulator 35 18 Op 4 41/0.000 - CDS 34886 - 35692 320 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 36 18 Op 5 38/0.000 - CDS 35737 - 36588 1046 ## COG0581 ABC-type phosphate transport system, permease component 37 18 Op 6 39/0.000 - CDS 36589 - 37476 1152 ## COG0573 ABC-type phosphate transport system, permease component - Term 37495 - 37544 12.1 38 18 Op 7 . - CDS 37559 - 38377 1140 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 38431 - 38490 2.5 - Term 38690 - 38734 6.6 39 19 Tu 1 . - CDS 38836 - 39255 216 ## - Term 39320 - 39358 0.5 40 20 Tu 1 . - CDS 39374 - 39526 170 ## - Term 39553 - 39590 6.8 41 21 Op 1 . - CDS 39628 - 40065 431 ## COG3772 Phage-related lysozyme (muraminidase) 42 21 Op 2 . - CDS 40062 - 40553 323 ## 43 21 Op 3 . - CDS 40557 - 40781 232 ## - Term 40788 - 40828 7.9 44 22 Op 1 . - CDS 40832 - 41107 219 ## 45 22 Op 2 . - CDS 41116 - 42222 580 ## 46 22 Op 3 . - CDS 42248 - 42571 281 ## gi|299146038|ref|ZP_07039106.1| conserved hypothetical protein - Prom 42671 - 42730 2.6 + Prom 42627 - 42686 6.1 47 23 Tu 1 . + CDS 42706 - 43054 163 ## Predicted protein(s) >gi|319804966|gb|ADMF01000019.1| GENE 1 3 - 699 516 232 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 17 232 20 241 584 114 34.0 5e-24 MKKASDKWYFTKETNAKGLCYIYAYQTQWDPVTKKSKRSARKYVGRLAADSVVNITAKFR TEFPQYAQGTFYFGLDKTLVDEAAYRRDFPNAPGPKPAEAEIDTALWDTRSMGFTWALEQ LAAQSQVLEHLREIFKEDARSLLNLAIYKLDGGNSMAAMEDWRASVYLPHGPALKSQRIS EVLSRVTPKDFARYFHLRHQSKIERMSGTDCVHYALDNTTISSYSATIADVA >gi|319804966|gb|ADMF01000019.1| GENE 2 973 - 2424 1935 483 aa, chain - ## HITS:1 COG:BS_yxlA KEGG:ns NR:ns ## COG: BS_yxlA COG1457 # Protein_GI_number: 16080922 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus subtilis # 6 476 2 441 457 110 25.0 5e-24 MSDASKIETNGVNPVPDNERYGRPFDLFPVWFSWNISIFGITLGIYVFGLGLSVWQAMLA GVIGYFLSCALVGILAVGSVRTGLPTLVQSRLAFGYHGNKLPTFFGYLANMGWKVTLLSM ATTTLADLVANLVPGLLNGKGMPVAGCTLGCFAVVLLLTMSGAIYGHQLIIKIEKAIAWL TGIFTIVYLFFFIPNINFSALSSAPSGSFATFVGGIVLSMTMVGLGFLNYGGDYARYLPR KTPARGVIFWTTTGIAVPVSVLLILGVMLAVGNPALLEKANHEPLAALTGILPFWFYVPF SLIVIISLISAGMTGIYSSGLALLALGVPMTRLATTILNGVIIALGAYYLLFISDSFVST FQSFLALISVVMGTWGAIEMVDLLRQKRIGWDCKLALAPGEGGESVRWTAFGSLIFASLI GLGTITSSDPYIAHAVSFLLPAGSETSVFARANIGLVAAMIIGASLYAVLTFVLQKGSHL KAE >gi|319804966|gb|ADMF01000019.1| GENE 3 2476 - 3429 1041 317 aa, chain - ## HITS:1 COG:ECs2903 KEGG:ns NR:ns ## COG: ECs2903 COG0524 # Protein_GI_number: 15832157 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Escherichia coli O157:H7 # 7 313 9 318 321 207 40.0 3e-53 MRSIIELIDALDVRKRILIIGSAFVDVIVHVPRLPLSGEDVEGSSRQQVVGGCAYNAADA VAKLGIDFDALIPVGEGMIADRVRETFHARGFTVREFRGIGDNGWCLSFVEPDGERTFVS MSGVEKCFKPEWLDEIDLQCADLIYLSGYQADARNAGFIEALLAEKRPDAQILFDPGPCS GSIPEEMFSAILSANTILKVNAQEAKTLAPSATPREAAAALSLLTAQSVIVTDGARGAYA AQASKVSHLQGFPVHVVDTIGSGDAHAGGVLAGLASGFTLAEAVLLGNAVASWVTAQEGA ATAPQAAELRARHLLDI >gi|319804966|gb|ADMF01000019.1| GENE 4 3447 - 4460 1144 337 aa, chain - ## HITS:1 COG:ECs2902 KEGG:ns NR:ns ## COG: ECs2902 COG1397 # Protein_GI_number: 15832156 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Escherichia coli O157:H7 # 6 332 4 328 334 222 40.0 9e-58 MSQLQDRIAGALAGMVLGDAFGVPGELWPRAKVRERFGRITEFLDGPADNIVACYFKAGH YTDDSAQAFVVLNAIEAAGTVPPVQTLAKDLIAWVESMNGFEINLLGPSSKASLLAWVKG EDALPVTKLSLTNGAAMRIAPVGCLIEAGEHEKIAEAAARVSRVTHSTDVTIAGAAMVAQ AVASGVAGRSWEQTLADVKTIFPIASAKGEPTWAASILARLEVFEELVLKRREAYDDEAV SRFIYDVIGTGTMTSESVTAALALAFWAQNPKKAAEIAANMGGDTDTIGCMAAAICGAHC GIGGIAAETVEFLEKTNGLHFGELAQGVMKTRAVFTL >gi|319804966|gb|ADMF01000019.1| GENE 5 4684 - 5208 526 174 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQIPVRFRYRIERRQARWNVVFPELSSANFTADSPAQARTEAPEKALTALARLLLKGSEA VPVCQRAHAGEGEAVLPLFAQGKARFIERAWALQVQAADVARALGITRQEAARLFDLAHP TKIDALSKALEVLGAQLDLSLSLLPQGPSPLLNEKPRRGRTPKSAAAADDTASA >gi|319804966|gb|ADMF01000019.1| GENE 6 5231 - 6205 784 324 aa, chain - ## HITS:1 COG:no KEGG:Psta_0517 NR:ns ## KEGG: Psta_0517 # Name: not_defined # Def: metallophosphoesterase # Organism: P.staleyi # Pathway: not_defined # 39 292 46 271 303 134 35.0 6e-30 MQRRVLLQSSMGLLMLSPWGFVRSGETLPSDAEVISSFGWATDVHHCRKSPDFWDEEGVA HHEYFDLSLEKFRKAVAFMNKRRPDFAIELGDFKDCTKTGSRAETVGLLDEVEAAFRQFP GPRFHVAGNHDFDKISLEDFLAHTENSDEMKGLTHYAFTKGGIKYIVLDACYNTMAGEHY SDGNLKWSVSMVPDFEVEWLRKVLAEGSEPVIVFIHQLLNFWDSSHGKIAGKIPDGYFIR NAAEVVDVLEQSRRVLAVFSGHYHSGWYSERRGIHYIVGKGMVENDAAHNAAGVVKIDKN LNIFIEGLEDEPSRNLTKSAFTSL >gi|319804966|gb|ADMF01000019.1| GENE 7 6298 - 6474 91 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRCGALVFKMQKSGRRRLFRLLPPLFDQARTDQLALAVLLQAAERLTRFNGFNERLGA >gi|319804966|gb|ADMF01000019.1| GENE 8 6412 - 6942 717 176 aa, chain - ## HITS:1 COG:RSc1227 KEGG:ns NR:ns ## COG: RSc1227 COG2236 # Protein_GI_number: 17545946 # Func_class: R General function prediction only # Function: Predicted phosphoribosyltransferases # Organism: Ralstonia solanacearum # 7 157 14 165 193 176 56.0 2e-44 MSDITYSWNEYIRLNEELVYKVAKSGWQFDCLICLSRGGMRPGDFFSRIYGKPLAVLATS SYREAKGTVQSNLDIADCMTGLAELKGKVLLVDDMVDAGKTIQEVVAHLKKRYPAITEIR VAVLWWKAHSVLKPDWHCVYFEDSPWIHQPFECYDDLGAEAFIEAIESGKTLGRLQ >gi|319804966|gb|ADMF01000019.1| GENE 9 7050 - 8348 1736 432 aa, chain - ## HITS:1 COG:RSc1226 KEGG:ns NR:ns ## COG: RSc1226 COG0104 # Protein_GI_number: 17545945 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Ralstonia solanacearum # 2 432 9 446 446 579 65.0 1e-165 MGKNVVVIGAQWGDEGKGKIVDWLTEQASGVVRFNGGHNAGHTLVINGKKTILRLIPSGI MHATSTCYIGNGVVFSPEAFFREVDELNAVGVPNVEKRLRVSGNCPLIMPYHIALDQARE AALGAKKIGTTGRGIGPAYEDKVARRTVRVADLYHPERFAEQVRAVMKLHNFILTQFLGA EALDPEKVIADTLVYAERLKPMVCDVSETLHEQMDEGRQFLFEGAQGSMLDIDHGTYPYV TSSNTVAGSACAGAGVGPEKLNYVLGITKAYCTRVGEGPFPTELLDETGELLRRKGNEFG AVTGRPRRCGWFDGAALRRAVQINGITGLAVMKLDVLDGLDTIKLGVGYKMDGKELKVMP SGADAVAKCEPIYEEFPGWTESTFGLTEWDELPESARQYLSRLSEVAGAPIALVSTGPDR EQTILHVNPFAD >gi|319804966|gb|ADMF01000019.1| GENE 10 8697 - 8900 344 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGWEVLLLSLGWVLVFEGISPLIAPERWLAMLAELTKADPRVIRAAASVLVALGLVIIW SFLGKVS >gi|319804966|gb|ADMF01000019.1| GENE 11 8904 - 9782 1026 292 aa, chain - ## HITS:1 COG:RSc1223 KEGG:ns NR:ns ## COG: RSc1223 COG0330 # Protein_GI_number: 17545942 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Ralstonia solanacearum # 1 289 1 289 304 302 52.0 5e-82 MKSITSIAVGVVVAAGLAQTCLYTVGEREYAMLFALGELKTVVTEPGLHFKLPAPLQNVV YLDKRILTLDASGADLVQTSEKKNLMIDTFVKWRIGDARRYWVSFQGSERAASDRLAMLL RDVLNIAVNKRTVNQITSSEREKAMAEISELLQARVKALGIDIVDVRMKRVDFTPEISES VYSRMEAERKRVASEERSKGAAQAERIRAGADRQSEVILAEAYRDAQKTKGEGDGEAARI YADAFGKDPEFARFYRSLEAYRRSFSQKSDVMVVDPSADFFSYLKKEGGEQN >gi|319804966|gb|ADMF01000019.1| GENE 12 9808 - 11484 1396 558 aa, chain - ## HITS:1 COG:RSc1222 KEGG:ns NR:ns ## COG: RSc1222 COG0330 # Protein_GI_number: 17545941 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Ralstonia solanacearum # 180 558 69 444 447 285 48.0 1e-76 MSLNDPHWGRSSDEEKKNDRGDNEQRSDGVGEDGEEQNARQNPNAQDDRNPADSSADGSR RTSRDAREDDEQRDRRSQGLLSDDDLENLWSNFQQAANKIMGRQGRSNQEDLRSRLKSRD DFSRDDEPNDAAPRQKGDDYPDDGGTHGGQKRQGLFAELDRLRNQFEEDDQRQQQRRESG ARNGGNGRGGNGGGLFGGGRGARAGGFSVSVLAVCAVIGWSVSGFYIVPEGQTGVVTTFG AYSKSTMPGINWHLPAPIQDVELVDVSSVRTAEIGMRGTTDRLREALMLTDDENIVDVQF NVQYRIKPETGAKDYLFNTRAPDASVTQAAESAMREVVGRKAMDSVLFESKAEIAEAVRN SMQAMLDRYSTGIEVMSVAIQNAQPPQQVQAAFNDAVKAGQDRERQINLGEAYMNAVIPK AQGTASRLKEEAEGYKARVVETARGDADRFTSVYTEYAKAPQVTRDRIYVDAMRDIYQNV TKVYVDQKSGSNLLYLPLDKIVASTQAAAKSEADSAVPASSAAAASTSAPNTAGTNSAGS ATYSTDIDPREMIRSRLR >gi|319804966|gb|ADMF01000019.1| GENE 13 11889 - 12365 565 158 aa, chain + ## HITS:1 COG:VCA1012 KEGG:ns NR:ns ## COG: VCA1012 COG0700 # Protein_GI_number: 15601765 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Vibrio cholerae # 8 155 8 155 155 161 62.0 5e-40 MNHPAPAKPMVTDVFVKGAVQGWNICVTSTIPNVLMAFVIIKILNHSGLLALIGQIFSPI MGIFGLPGEAATVLLGGWMSMGGGVGVAVALFDNGVLNGTQLAIVCPAIFLMGSQIQYLG RCLGVIGIKGSKIPLIMAIPVLTAFVSLFVMRILMLGN >gi|319804966|gb|ADMF01000019.1| GENE 14 12438 - 13553 1069 371 aa, chain + ## HITS:1 COG:PM0932 KEGG:ns NR:ns ## COG: PM0932 COG0624 # Protein_GI_number: 15602797 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Pasteurella multocida # 3 365 2 364 379 250 37.0 3e-66 MALLDDYIKDLAPLVNLDCGTCNTAGVTRAAEIMKGYFESIGFTCELIDLGPKAGRGLLA RNKPHADHYDVLLNGHLDTVFADGTAAARPFSIDGDFAHGPGCADCKGGILAAYYACKTA RPKDLERLSICCAFNPDEEIGSTSSHEWLASIGARSKCALIVECARAGGELVRSRKGVAD LKVVFRGRSAHAGNNPQDGANANVAAMRFSLACYELADPAKGTTVNPGIIAGGTATNVIP DSCEVRFDLRYCFDKDGSDLENQIFELAERSWAPGVSQTVELLGFTPAMPLSDDAKALTA KITEAAKMTGFEAKFVDAGGGSDGNRIAKAGIPVIDGCGPAGACFHTEREYLRLDTVEER VKMLTNFFSLL >gi|319804966|gb|ADMF01000019.1| GENE 15 13645 - 14772 690 375 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 9 324 43 362 425 270 47 1e-71 MRLLVSSDGLEPVGLMQAKREKPDPATFLGSGKIEELGILAKEAEVDVVVFDIALSAAQE RNIERLIGIPVLDRTELILDIFRQRAKSREGRLQVELARLEHLSTRLVRGWTHLERQRGG LGKTGGPGEKQIELDRRMIGTRMKQLRDQLKRLARQRGTQRRARSRGDSITVSLAGYTNA GKSTLFNKITRAETYAADQLFATLDTTARKFWLSDEETVVATDTVGFIRGLPHQLIEAFK STLDETVHADLILHVVDASSPVREEQIAEVNSVLADIHADDVPVILVYNKIDVTGQAPEI VRDQNGRPKAVFVSALTGAGLDELRQAVSEFSAAWREEHPNEPRELEDWELERTDEALPR RKTPAEELAELESLL >gi|319804966|gb|ADMF01000019.1| GENE 16 14879 - 15130 359 83 aa, chain - ## HITS:1 COG:RSc1220 KEGG:ns NR:ns ## COG: RSc1220 COG1923 # Protein_GI_number: 17545939 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Ralstonia solanacearum # 3 80 2 79 79 122 82.0 2e-28 MPSNKVQLLQDPFLNMLRKEHIPVSIYLVNGIKLQGQIESFDQYVVILRNTLTQMVYKHA ISTVVPSRAVSMTAQPAGDATEN >gi|319804966|gb|ADMF01000019.1| GENE 17 15582 - 16400 1015 272 aa, chain + ## HITS:1 COG:BMEI0641 KEGG:ns NR:ns ## COG: BMEI0641 COG5266 # Protein_GI_number: 17986924 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Co2+ transport system, periplasmic component # Organism: Brucella melitensis # 18 258 15 247 252 166 39.0 4e-41 MLHRTFSAALFAGTIAASLPAAAHFGLILPDPAMVLEQSKTAFKLDVSFIRPMEASTMTM VKPAAFYVVEDGRKTDLTPALHPGKLFGRDDWTLEYKFEKPGVYQFVVEPLPYWEQSEDK FYLHYTKVIVPALGAGLGIDPKDDDWSKPVGMKTEIVPLTRPYGNYAGTLFQGRVLVDGK SAPNTTVKVEFLNESDLYQPRNSYYTTQVMKTDDNGIFTFAAPWAGWWGFAAVRDASYTL KVDGVDKPVEMGAVLWTEFGKPMVRKIRQPGL >gi|319804966|gb|ADMF01000019.1| GENE 18 16502 - 17857 1584 451 aa, chain - ## HITS:1 COG:RSc1219 KEGG:ns NR:ns ## COG: RSc1219 COG1160 # Protein_GI_number: 17545938 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Ralstonia solanacearum # 1 449 1 447 447 556 64.0 1e-158 MLPVIALVGRPNVGKSTFFNRLTRSRDAIVADFPGLTRDRQYGQGRVGPGPYIVVDTGGF EPVRTEGIVQAMAGQAELAIEEADVVLFLTDARAGLTPQDIRIAQHLRRADRPVVLLVNK AEGLTETAKAEFYELGLGEPHLVSGAHGQGVRDALDLAFSCLPEDFPFDEPEAEEDDDGP RRIKVTLAGRPNAGKSTLINALVGEERVIAFDMPGTTRDAIKIDFEYDGRPYELVDTAGL RKKGRVFEAVEKFSVVKTLQAIEDANVVILVVDAKEGVSEGDAHIAGYVLEAGRALVVAV NKWDLLDSYERERFNLDLERKLHFLRWARMIRISALKRNGLNHLMRAVDEAHAAAYAKLP TPKLTRALLEAVQRQQPPRAKGGRPKPRYAHQGGSNPPVIVIHGNALEDIGESYRRYLEG YFRDTFNLAGTPLRVEFRTKANPYVDEQKKR >gi|319804966|gb|ADMF01000019.1| GENE 19 17995 - 19143 1204 382 aa, chain - ## HITS:1 COG:RSc1218 KEGG:ns NR:ns ## COG: RSc1218 COG1520 # Protein_GI_number: 17545937 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Ralstonia solanacearum # 12 372 22 382 388 211 35.0 2e-54 MTHKSSFTALAAALAVLPLAGCGIFSSSSTHDPHDYPDFKQTNLARVVWRTNVGDAAERN LAPAVTDTAVYAAGSNRVVRLDRQTGSIVWRTTTDGDVTAGVGTDGSHVAVGTSTGKVQV FDAEGKLSWEAKLSSDMEVPPLVGANRVIVKTSDTRITAFDLITGQRVWHYQGQAPALTL RAFSQMAWSPAGILVGQANGRLMALNPNDGRVVFDAVIGQAKGITEVERLIDVVGRPWVD QELMCAAAFQGNVVCMNVQNGRLVWNAKVDAVTGPVADGRLVYEVDDASRIHAFNRQNGR EAWVNESFLYRSASAPIRVGTSLAFGDYEGNITFLDPATGTPVARTKLSGAVTTPAAQYG YGAVFQTVEGDVAYVVEGADSE >gi|319804966|gb|ADMF01000019.1| GENE 20 19375 - 20013 925 212 aa, chain - ## HITS:1 COG:RSc1217 KEGG:ns NR:ns ## COG: RSc1217 COG2976 # Protein_GI_number: 17545936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 211 1 211 211 126 40.0 4e-29 MAYDLEEQESIDQMKAWWDRWGTPVTSVVCVCCLAFAGWNGWNWWQRNQAAKASQIYAAL QNAVATHDLKNVQSLSAGLISEYSSTLYAPLAAFASAQSASDAGDLADAKAKLNWVIEKS GRPEYDTVARVRLAGVLFDEGKLDEAAAVLAAAKPAEAQKVLVLDRQGDIWAAKGDLQKA RDAWTQAQAALNSQDPLNRVLELKLAALPSAS >gi|319804966|gb|ADMF01000019.1| GENE 21 20068 - 21366 1648 432 aa, chain - ## HITS:1 COG:RSc1216 KEGG:ns NR:ns ## COG: RSc1216 COG0124 # Protein_GI_number: 17545935 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Ralstonia solanacearum # 4 429 2 429 432 526 59.0 1e-149 MAKEKFTGVKGMNDMLPQDAPIWQYVQKTCVDVLSSYGYQEIRTPILENTRVFTRGVGEV TDIVEKEMYSFTDSMNGDQLTLRPECTSAVVRAVNEHNLLYGTTQRLWYCGPMFRHERPQ RGRYRQFHQLGAEALGMAGPDIDAEIIMMLARMWKALGVGPVKLEMNTLGAQEERQKHRE ALIAYFEAHKDQLDEDALRRLYTNPLRILDTKNPDMQGLVDAAPKLLDYLGEESRAFLSR LEELVSSAGIEYSINPRLVRGLDYYNHTVFEWITDKLGAQGTICGGGRYDPLVEMLGGRP APGVGFAMGMERVIELMREVGQVPKASQTDVYVLHHGGESQAKAMLLAETMRDRGIRVVT HPGEASIKSQMKKADASGAEFAVFATEDELAQGTVGIKALRAHEHAPFAEQTLVATAEAA DKVAEALAALHR >gi|319804966|gb|ADMF01000019.1| GENE 22 21499 - 22752 1131 417 aa, chain - ## HITS:1 COG:RSc1215 KEGG:ns NR:ns ## COG: RSc1215 COG0821 # Protein_GI_number: 17545934 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Ralstonia solanacearum # 9 413 17 421 431 489 63.0 1e-138 MPTVNACGLNRHWTTPVDVIWGPTTVTIGGGRPVVVQSMTNTATADAEASYRQTAELAEA GSELVRLTVNTPDAARAVVTIREKLDAAGIHVPLVGDFHYNGHKLLTEIPECADCLSKYR INPGNVGKGTKAEENFAMMIEVAKRTGAAVRIGVNGGSLDQALLARLMDENRQSEHPESP QAVLREALVRSAVESAEAAQSLGLPANRLVLSCKVSEVQELIALYRTLSRRTKAALHLGL TEAGIGSKGIVASTAALAVLLEEGIGDTIRVSLTPAPGASRTEEVIVAQEILQSMELRSF TPLVTSCPGCGRTSSDLFQRLAQETQQFLRARAPEWRRIAPGSEAMKVAVMGCIVNGPGE SRQADIGVSLPGSGESPVAPVYIRGEKAGVLKGADIAKQFQDIIEKFVRENYAKQGS >gi|319804966|gb|ADMF01000019.1| GENE 23 22867 - 23970 886 367 aa, chain - ## HITS:1 COG:no KEGG:Msip34_1717 NR:ns ## KEGG: Msip34_1717 # Name: not_defined # Def: hypothetical protein # Organism: Methylovorus_SIP3-4 # Pathway: not_defined # 40 367 2 336 336 84 29.0 6e-15 MAESNFTTPEQKNAADRSSGSASEKLEPSLNTLQGETAQTQAEPTIPVREEASAAPKGFG AVLRAAREAEGISVGDMAVQCRLAVTQIRALEEERLENLPEPVYVRAFIRGYAHALKIDP APLVDDYMMRCGRRGAAVEVGQLPNRSPSREAVFHEPPKNRTLKAVLFVVLAALVGGGIW AVYTDQFASLHTSSEAQKVESGANEAKETKTPAAEPAERAAAPSDAAPESQPAQPSAPAA AQAQPAAAAPAAQPAPSAAPAPAAQTASAAPAQPAPAASAQPPAAAPVLHKVEFRLGAGA SWVQVIAPNGRNVVASEMRPQSVQAYEIPKGSRFTIGNAGVVSLTIDGEVYPLDGVVRNG IARFTIE >gi|319804966|gb|ADMF01000019.1| GENE 24 23998 - 25200 1270 400 aa, chain - ## HITS:1 COG:RSc1212 KEGG:ns NR:ns ## COG: RSc1212 COG0820 # Protein_GI_number: 17545931 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Ralstonia solanacearum # 25 382 5 360 383 481 65.0 1e-135 MSETLVNPDKREEAASAPAEAAARVNLLDFDAAGLKAWCESIGEKPFRARQLTRWVHRHL VCDFNEMTDLAKTFRAKLLKLAEIRPPEVIHEKKSSDGTRKWLFAVGNGNAVEAVFIPED DRGTLCISSQAGCAMGCLFCSTGKQGFNRNLTTAEIVGQLWTAERELCRDRGITDPNDRV ISNVVLMGMGEPLQNLDAVIPAIKIFLDDDGYGLSRRRVTVSTSGLVRQIDKLAEAAPVA LAVSLHAADDGLRDKLMPINKKHPLGDLMAACRRYLRVAPRDFITFEYVMLGGINDSLAD ADHLAALVRREHVPCKFNLIPFNPFPQSDLEKPDREKVLAFCRRLNELGYVTTVRKTRGD DIDAACGQLAGEVRDRTRRAERLAQQKAEAAVILYRPQHS >gi|319804966|gb|ADMF01000019.1| GENE 25 25200 - 25625 585 141 aa, chain - ## HITS:1 COG:NMA1521 KEGG:ns NR:ns ## COG: NMA1521 COG0105 # Protein_GI_number: 15794415 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Neisseria meningitidis Z2491 # 1 141 1 141 141 203 75.0 8e-53 MAIERTLSIIKPDAVAKNVIGKIYSRFETNGLKIVAAQMRQLSQAEAEGFYAVHRERPFF ADLVKFMTSGPVMIQVLEGENAILKNRELMGATDPKKAAAGTIRADFAESIDANAVHGSD APETAAVEIAYFFPTLAIHSR >gi|319804966|gb|ADMF01000019.1| GENE 26 25782 - 26912 1070 376 aa, chain - ## HITS:1 COG:VC0696_2 KEGG:ns NR:ns ## COG: VC0696_2 COG0287 # Protein_GI_number: 15640715 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Vibrio cholerae # 81 346 1 265 275 292 53.0 6e-79 MVMTTVGLLEGSTEALYDNEAELRRLIGERLILLGAAAEPGQSEALADIILGRIAREAGR LVKAAEPEAADSAKTPQHKPVVIVGGAGGMGRQLHRAFERSGWPVRILEQGDWPQAAEIL KGAGTVVVSVPIDKTISVIEALTGLLPREALLCDVTSVKAGPVEAMMRVHRGPVAGLHPM FGPDVASFAGQVFVYAPGRDAAAAEPLLEQIRRWGAKVVTCSAEEHDRSMGIIQALRHFT TFAYGVFLSKLNPDLSVILQLSSPIYRLELEMVGRLFAQDPRLYADIILANPRNTQLIRG YVESLAPELAMIEARDRDEFIRRFERVRLYFGDLAPAFMKESGRMLNLIQTERAERADVM SLKDAPESDGNTSSQV >gi|319804966|gb|ADMF01000019.1| GENE 27 27132 - 27725 678 197 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAANLTIDKIFADNLGTAFGGCVRDQSLNLFSPEIARSAGANWNPLPFFGRAEKVRFRAR WAALLQGIGLWAALVVIPELKADPKLSRKITSQMEAYTDALLKAPILDHLSPDEIRDYTL LRQRFMRLGAAASTVPDKDAFARAFLSALTGKAPNEAAPARVSAMALHVGLAYGLFAKLA EISRSEPLSYQRDPKKR >gi|319804966|gb|ADMF01000019.1| GENE 28 27806 - 29281 1468 491 aa, chain - ## HITS:1 COG:RSc1209 KEGG:ns NR:ns ## COG: RSc1209 COG2265 # Protein_GI_number: 17545928 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Ralstonia solanacearum # 17 454 7 448 450 456 52.0 1e-128 MGRRGRSKERTPEYFTVDVERLDQEGRGIAHLDGKVVFIQGALPGERVTYERLRSKSSFD IGRTSAVLTQSWARVAPRCPKFGFGPGSCGGCTMQHIEPNAQVAFKERILMDTLWHIGKV KPENVLPPIRGPFWNYRHRARLTVRDVAKKGGVLVGFHEKASSYVCDMHACPILTQNVSD MIDPLRELISVLDMRQRMPQIEVAVGGDGRTALVFRHLDPVSPEDMEKLLAFGRAHGADI WLQPKGPETAHAVNPEDEKKLGLELTEFGVRIAFKPTDFTQVNHALNETMVGRAVRLLGL EPDHKVADFFCGLGNFTLPLARCSQRVIGIEGSEGLVARARQGAAENGLAEKTTFRARNL FTWSEQDWEELWQTMGGIDRVLIDPPREGALALARVLAATEKRPARVVYVSCNPATLARD CAILQHEGGWHIRAAGIMNMFPHTGHVESIAVLEPGPKPEKLDEEAERIEARIAAQHEDN VKMTLTDGSEG >gi|319804966|gb|ADMF01000019.1| GENE 29 29496 - 30437 883 313 aa, chain - ## HITS:1 COG:PA3623 KEGG:ns NR:ns ## COG: PA3623 COG0739 # Protein_GI_number: 15598819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Pseudomonas aeruginosa # 8 309 22 295 297 139 33.0 7e-33 MKAFPLRACGMAVGAAVLLGGCSSLPLGDVPIVDRSVPTSGEHTTAGSQSSSFAPLGDVR DSGRTHTVTVGDTIYNISVRYGVTPSALMQLNAVTDPTQLAIGRVLHIPESTAAPREVTM PEGVRVNRIEHVAPIEAAAVSPAAGSSSSGDQTSTGSVPTPTAPTSAAAAPAADPAPAAK AAEKPAAAVVPGTRMIWPVRGTVLSDFAKNGKGLDIGAAAGSVVVSAGAGEVIFVGSGVK GYGQLVIVRHTPTLVTAYGHNSKIVVQTGDKVKAGQKIAESGNTEAERPMLRFEVRDRGQ PVDPMKFLPPLRN >gi|319804966|gb|ADMF01000019.1| GENE 30 30461 - 31258 739 265 aa, chain - ## HITS:1 COG:RSc1204 KEGG:ns NR:ns ## COG: RSc1204 COG0496 # Protein_GI_number: 17545923 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Ralstonia solanacearum # 1 254 1 248 251 303 59.0 2e-82 MNILISNDDGYRAPGIEALARAMRRFGRVTIVAPDHNHSGASNSLTLNRPLTVEHMQGTD LYVLSGTPSDCVHVALTGLLDEKPDLVVSGINCGANMGDDTMYSGTVAAAIEGYLFGVPS IAFSQIDKGWAELESAAKVASAVVERFIERRDAEIEAGKTADEPVLLNVNIPNMPFESLR GILGTRLGRRSSAEPVIAEMSPRGFPIYWLGAAGKPIDAAEGTDFWATSHGYVSVTPLQV DLTSFKQVEAASRWVGGAFAAQADL >gi|319804966|gb|ADMF01000019.1| GENE 31 31257 - 31361 60 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQVKKAAGARLSDGFIAQRTGATADTADFGIFGL >gi|319804966|gb|ADMF01000019.1| GENE 32 31767 - 33191 1397 474 aa, chain - ## HITS:1 COG:RSc1535 KEGG:ns NR:ns ## COG: RSc1535 COG0642 # Protein_GI_number: 17546254 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 134 467 92 428 443 231 41.0 2e-60 MAEKTEDALGGIAAPKAEEAKSAAKTYETPLKEAYEAGDLPAPESAVGGTGNGSGVRPAD PNGPEERIARLRRQSAWLAAAFVFLFVFMMVVWMNDVSRAVIFWMWVVGTVGIFILSVRL WLALVREDEKKAKRIRDRDVRYRKTLALLPEGVAILGEGWRIDWVNARGAEHFGIAPEMI GRSFFDVVTDERLRHWLFERNFAGRCNYTSKAGLDLDVSVVAPDSRHMMIVTHDVTERLR IDEMRRDFVANVSHELRTPLTVISGFLDIESQGKVPANVMQKHRELMLDQARRMQSLLDD LLLLSGLENRDETDSDDAEVISMTKLLEDVVNEGRALSLGRHVITLEACRASLVGEPSDI RSAAMNLVSNAVRYTPEGGRIDVRWFRTSSGAVLSVKDTGIGIEEKHIPRLTERFYRVDK GRSRSTGGTGLGLAIVKHVCRSAGGQLKIESTPGKGSTFSMVFPKSRIFDDESV >gi|319804966|gb|ADMF01000019.1| GENE 33 33208 - 33978 739 256 aa, chain - ## HITS:1 COG:STM0397 KEGG:ns NR:ns ## COG: STM0397 COG0745 # Protein_GI_number: 16763777 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 6 243 5 225 229 193 45.0 2e-49 MSAPLLLIVEDELAIQELIVFVCEAEGFRTTRAGSIAEARSALAAERPDLILLDRMLPDR PGEEWLRELRSDAKTADVPVIILTARGNESDRVAGLDAGADDYVVKPFLPRELTARVRAV LRRRGAAVIAGRLSPMPSEETASTADEERVIVCGPLKLNEARFEATAAGKPLKLSAKEFK LLSLFAAKPGRVFSRANLLDAVWQSAFVDERTVDVHMLRLRKALAGSAAEDMIETVRGVG YRFRDPQTALNTPASE >gi|319804966|gb|ADMF01000019.1| GENE 34 34126 - 34836 760 236 aa, chain - ## HITS:1 COG:PA5365 KEGG:ns NR:ns ## COG: PA5365 COG0704 # Protein_GI_number: 15600558 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Pseudomonas aeruginosa # 6 235 10 234 242 90 28.0 2e-18 METKAHTVKRFDAELEELNNNVVKMASAVEEQLGRLGDALVNLNADEAAKVMAEDHVINS WEAELDDYLETIISRRQPQAVDLRLLLGYYRMTTDFERMGDEIRNAAKGVRKLSELVKPL SEPALANVSTLFSLHALLRVMGDDMIACVRLLDPERARALVARRTIVSAEVDEALSDTVE RLKTGELKLADGLEFIRINRSLERVAAHMQNVGETVVFMTEGVDIRHAGKTQPQQN >gi|319804966|gb|ADMF01000019.1| GENE 35 34886 - 35692 320 268 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 22 263 2 239 245 127 35 8e-29 MPLIHPEHLDQLAVREMPEPKILISDLNVYYGNFHALKNVSLPIPKGCVTAFIGPSGCGK STLLRSLNRMQDLYPEQRAEGSIRMGDLEILDPSIDVTALRSRVGMVFQRPTPFPMSIYD NVAYGVRLREKIAKADLDERVEWALRKAALWDDVKDKLTQPGTSLSGGQQQRLCIARGIA VKPEVLLLDEPCSALDPIATARIEELIDELKKDYTVVIVSHSMQQAARISEYTAFMYLGE LIEFGDTKTIFTHPQKKATEDFITGRFG >gi|319804966|gb|ADMF01000019.1| GENE 36 35737 - 36588 1046 283 aa, chain - ## HITS:1 COG:MA0889 KEGG:ns NR:ns ## COG: MA0889 COG0581 # Protein_GI_number: 20089773 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 8 283 28 303 307 241 50.0 2e-63 MKSAALRRFYEATGFTVMRAAVLINIAALLGIIGLIVVNAWPAMTWEFLTEPPRDLMTKG GILPCIIGTFCLALGALVIALPLGVASAVYLKEYSQPSVWVTLTRLSIANLAGVPSIVFG LFGLTFFVVFCGFGVSLLSGILTLAVLSLPIIINTTEAALSQIPQDWREASLALGASQRE TTLKVVLPNALPGILTGSILALARAAGETAAIMYTGSVFFTPKEGVSLFDPVMALPYHIY VLATSGTSIEATRPLQYGTALVLLILVLLMSSAAIVIRERRRR >gi|319804966|gb|ADMF01000019.1| GENE 37 36589 - 37476 1152 295 aa, chain - ## HITS:1 COG:MA0888 KEGG:ns NR:ns ## COG: MA0888 COG0573 # Protein_GI_number: 20089772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 17 290 15 291 296 218 48.0 1e-56 MALPAKLQADVNFRRGLAAAAGVSVLALAAIVIFLLSQALPIFAHVSLKDFLFSTEWYPT DDPPVFGIGALIAGSLACAALTTLIAVPFGVLTACAIHAGMPPALTRIVKPLIELMAALP SVVIGFIGMIILAPWLQDMFGIATGLNLFNASIMLAFMCVPTIASISEDALRNVPSGLRE ASLALGATRWETLLKVELRWAMGGIATAVMLGISRVIGETMVVLMVAGGAAIIPESIFDP VRPMTSSIAAEMAEAAVGGEHYHALYATGLVLFIITFAFNLCAWYAARRFGLEKK >gi|319804966|gb|ADMF01000019.1| GENE 38 37559 - 38377 1140 272 aa, chain - ## HITS:1 COG:MA0887 KEGG:ns NR:ns ## COG: MA0887 COG0226 # Protein_GI_number: 20089771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 24 270 66 316 317 177 42.0 1e-44 MTKNMIAVLGALAGFAAAAAVHAETVTVNGSTTVLPAMQLTAEGFMKANPNITVTISGTG SGNGIKALRDGMTDVAMASRDMKDKEVKDFADHNIKTVRYTVAHDAIIPVVNPNNAVKGL TMAQLKDIFAGKIRSWDEVGGAKAPIVVVGRDSSSGTFECFQELVMGKTRVSPRALIQAS NGGVVQAIAQNPNAIGYIGVGYMDKQTHPLTMNNVKPGIESAKDKTWPIARDLYLFTADN VKAEAKKLIDFMLSAEGQKDVEKAGFVPVAAK >gi|319804966|gb|ADMF01000019.1| GENE 39 38836 - 39255 216 139 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNWLKYAAVTMLVFVVFAAGYQLASARGDAALKSYQLEAAVARAEQGKKDYAKLVSAVD QVVAADVDIERIRSDTDRMRRAYESRLRKASAAACNAEQAAVARCEKLLRESVGLIEEGR SLLLRNAAVHDALVSTNIK >gi|319804966|gb|ADMF01000019.1| GENE 40 39374 - 39526 170 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSKEQLMKLDKTITFWKGFASGFATAVIGVAGLVALINYLVQITQAVKS >gi|319804966|gb|ADMF01000019.1| GENE 41 39628 - 40065 431 145 aa, chain - ## HITS:1 COG:XF1564 KEGG:ns NR:ns ## COG: XF1564 COG3772 # Protein_GI_number: 15838165 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Xylella fastidiosa 9a5c # 9 138 44 177 203 73 36.0 1e-13 MNFDSYSYELAMPFVKAEETLRLKAYKCPKGVWTIGWGHTGGVKEEDTCSREQAEAWIRS DLQSAQTGLAKYINVPVSANQFIALLSLAYNMGAEGVVQKCPKMLRALNAGDYETAANEF LDVTNGGLAGLVARRRREAELMRQG >gi|319804966|gb|ADMF01000019.1| GENE 42 40062 - 40553 323 163 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLHDLLPKTVEGALAVLGGWLGLIWSATLQNVAPLAWWFAIFVIADLITGVWAGIKTTGF SSKTLYSGMVKKGIAFFIIILAHGLDVSFWYVLKDLPVFQSVTLCAYCCGEFGSIVENIE RAGYGDALPPALRKIFMTLEERLTNAVDKKLDAVGLEDKEDKK >gi|319804966|gb|ADMF01000019.1| GENE 43 40557 - 40781 232 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISEDLKKMLASLGVSAEELKDAALYRAQAWLDDQKTSLDTETRRKCRMFWGAVCIVSSA LCCIAGWYLHAFVG >gi|319804966|gb|ADMF01000019.1| GENE 44 40832 - 41107 219 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDAAYDAGDLLVKAAAFMAAARALGSTSEEINLAVERIAAEFKTVRSEISSGSNYADRI NALETAVTELTQNQAQIANALAKLGGQTQPF >gi|319804966|gb|ADMF01000019.1| GENE 45 41116 - 42222 580 368 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVYLIDKIKPKNNGTFGMADTVDIDHSDGRRLDVVLDEIAEKADGGGTAVTALTKRVET AEGKIAAAENALAKKVEINDADTSATATYSSTKIEDAITAAKQAVKDELLDGAGDKFDTL KELQDAITTNKDAITALNEVAGAHIRYDQAQTITDAQKKQARDNVGAASDSDLVTGLASK LDATVLKAPAAEGEKVALSSLTAEGEYIVTSPTERPTNFSADPLLVSVRRKGSVIVQLVG GIDDSRYQLYGRIGTITAAAGDTPESITWTDFSEIGAQPDLSGYATKTELNTVQSTADAA QTAAATNASTIASVKTTVDGHTSKLSTIENQVDTNTAAIQANASDISTLRTALGASTDFV ATFEAALK >gi|319804966|gb|ADMF01000019.1| GENE 46 42248 - 42571 281 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|299146038|ref|ZP_07039106.1| ## NR: gi|299146038|ref|ZP_07039106.1| conserved hypothetical protein [Bacteroides sp. 3_1_23] # 1 106 385 488 491 77 40.0 2e-13 MQVLNGCYYGVGTVDVDGADKAFVAGLTKVLSGSRARTIDVTAGEGEFIYYAIPHRLGTP SFTVGGFEGGFSLLKTFDYENPAGYTESYDVYKSTNANLGATKVVIA >gi|319804966|gb|ADMF01000019.1| GENE 47 42706 - 43054 163 116 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPKVEPPRSC Prediction of potential genes in microbial genomes Time: Sun May 29 19:42:13 2011 Seq name: gi|319804905|gb|ADMF01000020.1| Sutterella wadsworthensis 3_1_45B cont1.20, whole genome shotgun sequence Length of sequence - 88351 bp Number of predicted genes - 65, with homology - 54 Number of transcription units - 36, operones - 16 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Tu 1 . + CDS 675 - 821 61 ## + Term 872 - 920 -0.8 3 3 Tu 1 . + CDS 1205 - 2647 1888 ## COG0114 Fumarase + Term 2721 - 2782 17.1 4 4 Op 1 . - CDS 2849 - 2962 58 ## 5 4 Op 2 2/0.250 - CDS 3057 - 4151 802 ## COG2721 Altronate dehydratase 6 5 Tu 1 . - CDS 4278 - 4580 295 ## COG2721 Altronate dehydratase - Prom 4729 - 4788 3.7 - Term 4871 - 4913 8.1 7 6 Op 1 . - CDS 4971 - 5309 248 ## Glov_1004 hypothetical protein - Prom 5385 - 5444 1.6 - Term 5310 - 5345 4.7 8 6 Op 2 . - CDS 5454 - 7001 2012 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 7089 - 7148 2.3 + Prom 7117 - 7176 1.9 9 7 Op 1 8/0.125 + CDS 7203 - 9209 1438 ## COG0642 Signal transduction histidine kinase 10 7 Op 2 . + CDS 9252 - 9905 398 ## COG4566 Response regulator 11 7 Op 3 . + CDS 9902 - 11575 1124 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 12 7 Op 4 . + CDS 11554 - 12279 692 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis + Term 12303 - 12346 3.5 - Term 12291 - 12334 10.0 13 8 Op 1 . - CDS 12387 - 13922 1723 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 14003 - 14062 3.0 - Term 14011 - 14051 6.5 14 8 Op 2 . - CDS 14083 - 17592 3588 ## COG1530 Ribonucleases G and E + Prom 18760 - 18819 2.1 15 9 Op 1 3/0.125 + CDS 19054 - 20073 170 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family 16 9 Op 2 . + CDS 20070 - 20741 588 ## COG0546 Predicted phosphatases 17 9 Op 3 . + CDS 20841 - 22472 1197 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 22512 - 22567 11.6 + Prom 22511 - 22570 2.5 18 10 Tu 1 . + CDS 22644 - 23357 336 ## + Term 23497 - 23525 -0.2 + Prom 23455 - 23514 2.5 19 11 Op 1 . + CDS 23601 - 24749 1322 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase + Term 24817 - 24862 11.1 + Prom 24753 - 24812 2.6 20 11 Op 2 . + CDS 24892 - 26508 1401 ## COG0405 Gamma-glutamyltransferase + Term 26518 - 26570 11.5 21 12 Tu 1 . + CDS 26719 - 26898 162 ## - Term 26787 - 26821 -0.9 22 13 Tu 1 . - CDS 27001 - 28296 1242 ## COG1301 Na+/H+-dicarboxylate symporters 23 14 Tu 1 . - CDS 28445 - 30013 1527 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 30090 - 30149 2.8 24 15 Op 1 16/0.000 + CDS 30680 - 33790 3899 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 25 15 Op 2 . + CDS 33825 - 34736 974 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 26 15 Op 3 . + CDS 34746 - 35465 1015 ## Elen_1680 hypothetical protein 27 16 Op 1 . + CDS 35803 - 36777 1091 ## Elen_1679 formate dehydrogenase accessory protein 28 16 Op 2 . + CDS 36835 - 37719 1039 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity + Term 37752 - 37792 2.3 + Prom 37737 - 37796 2.0 29 17 Op 1 28/0.000 + CDS 37906 - 39294 761 ## COG0420 DNA repair exonuclease 30 17 Op 2 . + CDS 39269 - 42622 2316 ## COG0419 ATPase involved in DNA repair + Term 42630 - 42673 6.5 - Term 42613 - 42637 -1.0 31 18 Tu 1 . - CDS 42730 - 44046 1512 ## COG0477 Permeases of the major facilitator superfamily - Prom 44111 - 44170 2.9 32 19 Op 1 3/0.125 + CDS 44370 - 45443 932 ## COG0787 Alanine racemase 33 19 Op 2 . + CDS 45448 - 46836 1179 ## COG1066 Predicted ATP-dependent serine protease + Prom 46907 - 46966 2.5 34 20 Op 1 . + CDS 47034 - 47969 431 ## gi|163750634|ref|ZP_02157871.1| peptidyl-prolyl cis-trans isomerase SlyD 35 20 Op 2 . + CDS 47833 - 48087 58 ## 36 20 Op 3 . + CDS 48106 - 48315 107 ## gi|238789863|ref|ZP_04633644.1| Transcriptional regulator 37 20 Op 4 . + CDS 48251 - 49069 286 ## COG0583 Transcriptional regulator 38 21 Tu 1 . - CDS 49056 - 49289 69 ## 39 22 Tu 1 . + CDS 49249 - 51066 2388 ## EFER_3637 putative arylsulfatase; possibly exported + Term 51100 - 51139 7.4 - Term 50965 - 51000 1.0 40 23 Op 1 . - CDS 51091 - 51339 200 ## 41 23 Op 2 . - CDS 51245 - 51649 276 ## plu3215 hypothetical protein 42 23 Op 3 . - CDS 51646 - 52065 248 ## HS_0537 hypothetical protein - Prom 52244 - 52303 5.5 - TRNA 52656 - 52740 72.2 # Leu TAG 0 0 43 24 Tu 1 . - CDS 52785 - 53330 497 ## - Prom 53385 - 53444 1.7 + Prom 53344 - 53403 4.3 44 25 Tu 1 . + CDS 53597 - 54958 1841 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 55036 - 55081 8.1 + Prom 55047 - 55106 2.5 45 26 Op 1 24/0.000 + CDS 55286 - 55876 743 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Term 55953 - 56007 12.7 46 26 Op 2 18/0.000 + CDS 56072 - 57406 250 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Prom 57437 - 57496 3.4 47 26 Op 3 2/0.250 + CDS 57520 - 59982 2800 ## COG0466 ATP-dependent Lon protease, bacterial type + Term 60018 - 60074 1.0 + TRNA 60104 - 60179 96.3 # Val TAC 0 0 + TRNA 60421 - 60497 93.0 # Asp GTC 0 0 + TRNA 60686 - 60762 93.0 # Asp GTC 0 0 + TRNA 60828 - 60904 93.0 # Asp GTC 0 0 + Prom 60830 - 60889 79.3 48 27 Tu 1 . + CDS 61050 - 62951 2646 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 63023 - 63076 5.4 - Term 63011 - 63064 9.2 49 28 Tu 1 . - CDS 63091 - 64650 1820 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 64676 - 64735 2.8 50 29 Tu 1 . - CDS 64967 - 65305 97 ## - Term 65934 - 65978 6.2 51 30 Op 1 . - CDS 66015 - 66527 157 ## WS1617 hypothetical protein 52 30 Op 2 . - CDS 66589 - 66885 212 ## gi|302859663|gb|EFL82742.1| CRISPR-associated protein Cas2 53 30 Op 3 . - CDS 66898 - 67911 746 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 54 30 Op 4 . - CDS 67908 - 72176 1587 ## lpp0160 hypothetical protein - Prom 72210 - 72269 6.1 + Prom 72961 - 73020 5.1 55 31 Op 1 24/0.000 + CDS 73241 - 75208 1649 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 56 31 Op 2 1/0.250 + CDS 75285 - 77993 2642 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 57 31 Op 3 . + CDS 78053 - 79948 1887 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 58 31 Op 4 . + CDS 80016 - 81374 782 ## GFO_3330 NlpC/P60 family protein + Term 81504 - 81542 7.7 + Prom 81398 - 81457 4.3 59 32 Tu 1 . + CDS 81602 - 83419 2308 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 60 33 Op 1 1/0.250 - CDS 83535 - 84257 668 ## COG0177 Predicted EndoIII-related endonuclease 61 33 Op 2 . - CDS 84350 - 84991 386 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 62 33 Op 3 . - CDS 85008 - 85757 741 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 85908 - 85967 2.2 - Term 85935 - 85964 1.1 63 34 Tu 1 . - CDS 85977 - 86309 423 ## COG1146 Ferredoxin - Prom 86382 - 86441 3.5 - Term 86470 - 86521 10.1 64 35 Tu 1 . - CDS 86608 - 87498 1035 ## COG2984 ABC-type uncharacterized transport system, periplasmic component + Prom 87971 - 88030 7.0 65 36 Tu 1 . + CDS 88056 - 88350 195 ## Predicted protein(s) >gi|319804905|gb|ADMF01000020.1| GENE 1 3 - 375 221 124 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPERWNLREAALCL SVLG >gi|319804905|gb|ADMF01000020.1| GENE 2 675 - 821 61 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFMCFTQFDMPHNLESLHLTARIAKRGFAAQLTGFREVESFSMTKISH >gi|319804905|gb|ADMF01000020.1| GENE 3 1205 - 2647 1888 480 aa, chain + ## HITS:1 COG:Cj1364c KEGG:ns NR:ns ## COG: Cj1364c COG0114 # Protein_GI_number: 15792687 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Campylobacter jejuni # 3 468 2 461 463 622 65.0 1e-178 MDQFRIEKDSMGEVKVPNEKYWGAQTERSYENFKIGIEKMPVQIVRAFALLKGACAEANR AFGKLDDRRADAIIQATDEAFEGKLDGNFPLVVWQTGSGTQSNMNMNEVFANRAIEILGG NFRDKKDLPKDQLVHPNDHVNMSQSSNDTFPSALSIMAVVETTNYLLPRLEELEKALYAK SEEFKDLIKSGRTHLQDATPLTLGQEFSGYASMLTHSRENLVAALEPCRELAIGGTAVGT GINAPEGFGAKVAECLTKKTGLTFKDAPNKFHALTSHDAVCFLEGALAGLAADLMKIAND IRWLASGPRCGLGEINIPANEPGSSIMPGKVNPTQCEAVTMVAVQVMGNAAAINFAASQG NFELNVFKPVIAYNLIQSIRNLADVMKSFEVHCVVGITANEQRLHDLMTRSLMLVTALSP LVGYDNAAKIAKYAHAHDMSLKEAALDLKLCTAEQFDQYVDPSKMIHPTPVCCNKKCCNK >gi|319804905|gb|ADMF01000020.1| GENE 4 2849 - 2962 58 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALSIFSDLDTPLWCIEVFLISIYKKMDTDKIPADEL >gi|319804905|gb|ADMF01000020.1| GENE 5 3057 - 4151 802 364 aa, chain - ## HITS:1 COG:STM0650 KEGG:ns NR:ns ## COG: STM0650 COG2721 # Protein_GI_number: 16764027 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Salmonella typhimurium LT2 # 20 364 62 390 390 210 35.0 4e-54 MTRNTRHFEIPAETGRTEVDREVIARTLISLMNNANVGGIVLLAVKSGAGSAYKNMCAER FEEEARKTGKPFRIVYLTNVGGSYNMLGETLRLTREVLLEVSDFRRENCPLSALTLGVKC GTSDATSGIAGNPCVGAAFDQLIRAGGTAFFSETTEIIGAEDLVAKRAVNESVAKKILSA AKHWEDKAKATGEDIRKINPIPANIAAGISSLEEKSLGAIAKSGTSPIQDVLKYAEMPKG SGLYFVDSWMSSLSLPLCLTACGATIMLYQMGGGKIAQHPMMPSINPTVVSPFLYLTGNA IAYSRAPDNFDFDASPIMTEGASIPEMGTKLLEHLSAIASGTMTKMETLNYAEQLELYME GPVL >gi|319804905|gb|ADMF01000020.1| GENE 6 4278 - 4580 295 100 aa, chain - ## HITS:1 COG:STM0649 KEGG:ns NR:ns ## COG: STM0649 COG2721 # Protein_GI_number: 16764026 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Salmonella typhimurium LT2 # 12 97 27 111 113 69 41.0 1e-12 MEKRVKVLKLTPHDNVGTALQDLKKGDTFQIILDGKVIGEDTAKTEIPFGFKAALGNIPA GTNIVKYAHVIGRASIDIQSGELVHVHNIEGTRGRGDLNQ >gi|319804905|gb|ADMF01000020.1| GENE 7 4971 - 5309 248 112 aa, chain - ## HITS:1 COG:no KEGG:Glov_1004 NR:ns ## KEGG: Glov_1004 # Name: not_defined # Def: hypothetical protein # Organism: G.lovleyi # Pathway: not_defined # 38 112 88 165 165 76 51.0 3e-13 MKKTLIALAFALAALPFAGDAAAKGFADYHTETLKLPCTTCHATKDEMPTTDTCIKCHPK DKLVASTKNVKPTNPHTSPHYNADLDCVNCHVGHEPSENYCAQCHNFDFKVP >gi|319804905|gb|ADMF01000020.1| GENE 8 5454 - 7001 2012 515 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 33 513 28 477 484 192 34.0 9e-49 MLLKEKKMVELNRRTFLSGSVAAGAAALFGTEAAHAAGAVKLPAKWDETADVVIVGSGFA GLAAAIEAKKAGASVVVLEKMATVGGNSIINGGILTATGCPQQKKHGIKDSPELLAHDML VAGLYLNNPEKVKLVADNALSNYEWTVNELGVEYNPDAIGQEGGHSVPRYVFTKNGSGSG IVSKEVEKLEKLGVKVRTRTYVKHVLRDDTGRVLGLEVLEGYRFPKTGTGKTKFIRAKKA VILCYGGFSRDVEYRTMQDPKLTAALDSTNQPGATSELWRETSRIGCAQVQNDWIQCTPW NNPKEKGMGIGWTFAQSGAAEYGLWVATDGKRFVNELANRKVRADAIMVLKGEGKSAVAI CTKPNLKAFEEARPGMLQKLLEQQIIKEYKSLDEIAADYKMPVDTLKATVAEFNKAVETK SDPAFGRYINNEQTPLAEGPWYAAEMSPKVHHCMGGLVTDLQCRVIDVVDGKPVPGLFAA GEATGGVHGAVRLGSCAILDCLVNGRIAGQQAAKA >gi|319804905|gb|ADMF01000020.1| GENE 9 7203 - 9209 1438 668 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 95 630 51 569 592 109 24.0 2e-23 MPYAIRLPLVLKTVVVHLLLPAALAISLGAAGGVVHADVLPPQMQDASESAAAAEAELTQ GAGDRTLHPVIRLGVLTHSPPWYDGSFVDESVRWLAWKLPQFRFETDYLGTGDLMRRMEA REIDLAVAPASFFFFAQRPLMNRFVASIVSDAAVDAEESAAAAVIVRRDREDLKTLADLK GRSVSLVRDEVSPGELELKREVVRIGLDPDHFFGQELREPRLRMRAVVTDVLSGRTDAGI LRACFLEELERSGLRGAYGELRVLDERKDDGLHCRHSTPAYPGWMLASTASLSQEAARAI TAVLLTKPANAWGQHWTVSPNVEAYDDLFRTLRIGPYAYLREWTLARIWSEWKAAIIIVL ISIVGLCVHGFVLEKLVGLRTRELKEAWKKQQETEREAREASARLESLLRAGAVGQISSI VAHEMKQPLGVIQNLSRGTLRLIEDEPETLDEVAQAVESINDEAVRAAQIIDRVRSWSQG RVNRQVLEADQGVKRAVQSFMLTNRSRGISIRTGVLQSAKVWMDPLELELIVVNLLSNAA EAARKSDHPTVMIDLQTARESLPGDVAAVVLTITDNGPALSDQTFAALGCTALQTTREGG LGLGLMIVRTLAENNVGRLTFERLAPHGLAVHVTLPVWMPEIKKADIDLREKTRAADDSK DPSSHSAL >gi|319804905|gb|ADMF01000020.1| GENE 10 9252 - 9905 398 217 aa, chain + ## HITS:1 COG:mll0990 KEGG:ns NR:ns ## COG: mll0990 COG4566 # Protein_GI_number: 13471106 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 1 212 1 212 212 122 33.0 4e-28 MNFDKTTTAETPLIRIVDDEERMRESLAFMLKHEGFECCVYPTAESFLKGDTPSRPGCLL LDVQMDGMTGLELQEEMIRRGITLPIVFLSAHGDLDMAVDAMRRGACAFIQKTADRARLL QAIVDAMAKSRGAVGDSTPGALVAAWNTLTDREKEVAKLVAEGLLNREVGERLGGIAVKT VQVHRSEACSKLGVKGAAGLAQAVRAVEMALKVRQTP >gi|319804905|gb|ADMF01000020.1| GENE 11 9902 - 11575 1124 557 aa, chain + ## HITS:1 COG:YEL047c KEGG:ns NR:ns ## COG: YEL047c COG1053 # Protein_GI_number: 6320788 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Saccharomyces cerevisiae # 57 525 6 466 470 127 27.0 7e-29 MKSKHDVRAQQSRRRFLADTALGAAGLGLGAAGMESAQAQTKWEKMIKGLQTVTTDVLIV GSGAAGTAAAIEARRSGASVLVIEKMGSLGGSSIISRGALAVPRSPMQRAMGIDDSPEHF ADDLMSSAYCGHPGRIECLALEALLTFEWLTNEIGVRWVMDAVGSEIEQSVPRSAIVAGD GAAALMMPLLDRARTLDAEFEVNEKLLHLITRETYDGVAVTGAVVENTRTGLRRCINVRR GVVLAAGGFAADAPFRQRYNQRLSEHVGTATQPGSTSEVLREAARIGAWLVHLQYITCIP DANPVEKGWGTSWQFSRWCAGAQGLWVERQTGRRFVNEMSSTAERTNGVFDVLNADRDVV AIADARAVRHPGSMVFTASDVELLVSRGFVQKYETLALLAQACGIPLSNLKVEVELYNRA ITAAREGRTAGSFTDRLGRPIAPEAELMEEGPWYCAPLLAKVLMCSGGLAIDLKSRVLSV VDDRPIPGLFAAGEITGGLNGKGDAGACGLMDAIVFGRIAGREAARIPKDYSDWREMNPL VFHQLIDMERLWTSSAT >gi|319804905|gb|ADMF01000020.1| GENE 12 11554 - 12279 692 241 aa, chain + ## HITS:1 COG:mlr2151 KEGG:ns NR:ns ## COG: mlr2151 COG1985 # Protein_GI_number: 13471997 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Mesorhizobium loti # 3 236 5 227 232 132 38.0 8e-31 MDIVCHMITSLDGCILLERWSKPAERVDFTQVYEATAKRLQGDGWMVGRITMAEYGQGVV EGEPAGMRGRGESVPRAYVGDRQDRPLAVVFDPKGRLQFSKNGLPTGEHVVAVLDPKIDE AHLARLRRAGVSYVFQGDGAECTEREKLSAALAALEETFGVKRLLLEGGGVLNGSFLAAG LIKEISVLVCPTVDGRSESAKLFSWAGSEELSPAEGVRLKLLEAEPLANGVVWLHYLNTL A >gi|319804905|gb|ADMF01000020.1| GENE 13 12387 - 13922 1723 511 aa, chain - ## HITS:1 COG:STM0849 KEGG:ns NR:ns ## COG: STM0849 COG0747 # Protein_GI_number: 16764211 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 12 511 12 512 512 562 57.0 1e-160 MNRKQYTALAFALVGAAALSAQAVVAKDLTVAVYSAFTTLDPYDASDTLSQNVAKSFYEG LFGFDKDMKLVNVLAESYDVSKDGLEYTIKLKQGIKFSDGEPFNAAAVKANFDRVTNPEN HLTRYQLYRNIESVEVVDDATVKFHLKEAFSAFINQLAHPSGVMICPKTLALSKKEVAFN PCGTGPYILEKYNPAEYLVVKKNPSYWQKGLPKLDSISFRPVLEDATRVAMLRTGEAQFV DVVPPEHVERLKETPNIVVDAAPSIVQRQIYLNNTKKPFNDLRVRQALNYGLDKHAMVKV LYKGFSAPATGVAPEGIDYAKQFGEWPYDPKKAKELLTAAGYPNGFTATLWAASNSSANQ KMLQFLQQQYARIGVKLQVRALEAGQRVTLVQSVRPEKSTSQMFCWGWSASTGELDWVLR PLLATSSFPPANSNYAYYSNPKLDSLLTAALKTTDRAEKTKIYDEAQELIWKDAPWVFLV VDQGISARSANLTGFYSLKDGGFNFLEADLK >gi|319804905|gb|ADMF01000020.1| GENE 14 14083 - 17592 3588 1169 aa, chain - ## HITS:1 COG:RSc1040 KEGG:ns NR:ns ## COG: RSc1040 COG1530 # Protein_GI_number: 17545759 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Ralstonia solanacearum # 1 1002 1 896 1014 661 48.0 0 MKRMLFNATHPEETRVGIVDGQKLIDIDIETAGREARKSNIYMGVVTRIEPSLEACFIDY GEERHGFLPFKEISRSYFAEGVDVRLATIKEAIHEGQELIVQVEKEERGNKGAALTTFIS LAGRYLVLMPNNPRAGGVSRRIEGEERQELREAMDRLKLPNGMSTIARTAGIGRTTEELQ WDLNYLLKLWEAITDAARPVYEYPTENGHTKLLPEAQINGKKGKRANPAPFLIVEESNLV VRAIRDYFQPEIGEILVDTDDIYEQARQFMAHVMPDMVDRVKRYRDDIPLFTRFQIEQQI ETAYSRTVPLPSGGAIVIDHTEALVAIDVNSARATRGADIEETAFKTNCEAADEVARQMR LRDLGGLIVIDFIDMAEAKNQRAVEQRLKDAIRYDRARVQTAKISRFGLMELSRQRLRPS LSEGSHITCPRCNGVGVIRDTESCAIQVLRILQEEAMKEGTGSVRAQVPVDVATFLLNEK RNDITKLEARHRVPIVLVPNTSLETPHYHIERIRQDDERLEVQEPSFKLAETIETVADDP YAQKSQEEKPLRPKQVPVIKNLIERDPAPVQTAESKKAEQKANAGRVKQLQPVEPKKSLF KRIIGFFLGTSDNKAEQSEKSAKTNKSSQKKDRDGRADERRRARGARGDRQERGDRRRAA RGERLERTDRLERQEAAEKTEKTERQERTRRQRPERAERTERTERVERTDRQDREDRRRS RKSAQQQSTDVTPEKLTLTQPAVDPELAAAEAAPSQDVDAVVTEAVQAEAPAAQQPQDEE RRSRRRRQRRRPADETTETAAAPETPETSEAPEAPTAEAPEAAVPEVQKTEAADSQEGLE TPEADEAAESDAADGSRRRRPRRRRRGSRGEGEAAEGSDAAAETEAPKSADAAQAFAEAA QPTWTPAPEALVQIETKPNAVSEAVHGAFADAVPAADEAAPEKKPARPRRSRKPRAETVK TEVQPEASASSIEPAETLVQIETKVPTKAAPAEVPAVVTPAPVPVVRAEALPQVPVEILE QVETKVQPTKPIEETKAVIEAIEAAEPAEAVETVEVTQAYEAHEAKVDADTPAVGEGLAA NLSAAGLQQVETKEPSAATGYVPVIQPGRAVAASAVVEDEGPLEQVHTRPELVKPVDYAP QAAAGRKVETPVDNTAQEHLVQVETTKHE >gi|319804905|gb|ADMF01000020.1| GENE 15 19054 - 20073 170 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 103 320 75 279 287 70 28 4e-11 MSISLIGEITPTPSAELKTVPADRVSYVLIGEDADGQRLDNFLFRIAKGVPKGHVYRVIR AGEVRVSKKRAKAETKLMLGDVVRIPPMRVAQKPAGTPPAAPLAQGVLPVLYEDRHILIV LKPAGIAAHGGSGISYGLIERLRATRPEEPMLELCHRLDKETSGAIVIAKTRKALVRMHD LMKEGGVEKHYKLLVKGDWVNERQHVKVPLERYLLPSGERRVRASSEGMSAHTIFTVLER FGSVTYLDAELKTGRTHQIRVHALSQGFPLAGDDKYGDFAFNRECTHGLLGAPLKRMFLH AWKLRFAHPVTGELVDITAPLPEELSAVISALESKKAAQ >gi|319804905|gb|ADMF01000020.1| GENE 16 20070 - 20741 588 223 aa, chain + ## HITS:1 COG:RSc1042 KEGG:ns NR:ns ## COG: RSc1042 COG0546 # Protein_GI_number: 17545761 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Ralstonia solanacearum # 14 222 8 216 219 172 46.0 6e-43 MTQTQQIKTFHPKLVVFDWDGTILDTTAAIALSIQYACEKIGLPVPSTSLAKSVIGLGWR DAIRIVAPTCPEEDYSTFGSFYTERYRPAETEVHLFPGIVELLQKLKNSGIELAVATGKS RRGLNRVLAQTGLADCFSTTETVDENPSKPNPAMLEAISVAMGRSAEEMVMVGDTTHDIY MAHAFGCPCIAVSYGAMTTKMLEPAQPDAICASVAELAQSLGM >gi|319804905|gb|ADMF01000020.1| GENE 17 20841 - 22472 1197 543 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 64 510 40 452 484 161 30.0 3e-39 MDYYSRVRVVRFFTFFDNPFIPKGVVPDNGHRRRKMKQVWKFTAAAAAVLCFAGGALAAD RVMDADIVIVGAGAGGMTAGAAAVDNGLKTIVLEKNAVVGGGGNYMEGTFAVGSTLQKAD NIGINPERQFKRVMDFHHWRINAKALNHWLKQTGPTMDWLADHNIHFEAVKTAFIDGTRT WHMYKGGHGTVLIQEFTKQIKEKGGQILTSTPATELIIDNGIIKGVRARTADGSTLTINA SATIIATGGFSGNKEMVQKYLPYAGYESAGSPGRTGDGVKMLESAGAKLVNMNVCMQAGL WLKDVPTDLQFGKDGVTNAHYVRLLAALFQPYLKTSLRGDRVADETLPLEYISNAYEEVG GEGFAVFDNATREEMINEGLVRGYFGMVTPGTKFSNFDELFARGEKDGFCFKAATLEELA AKTGMDPQRLTATASRMNELVKLGKDEDFYKDAQWLREVKTGPFYAIKGSLRMYATTGGA SVNENFQPLNADGEPIPGIYAIGQDAGGLYSDSYDMHIAEGTASSWAINGGKLAVEHFVK TRK >gi|319804905|gb|ADMF01000020.1| GENE 18 22644 - 23357 336 237 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSLNLLPVCPWFVPAAPASLRLGVEALRSEIELYAPRQIVQREEEPYSEIRVVHSGLLS QAVINRRLSKPLAMNLYAESSMMGFLNLFTGVQAPRLVTCEKRAKATVVNRQLVLAAVKT NSQFLLEFSAYCEIAAKSELIGMEALFSLPLEERLQLFYAAALLRSGAHPLESSAEYLRM PYPITRAALERVIYVSRASLDRLLAAASKSGMILLQGGERFVRRRDIAAMTEWILER >gi|319804905|gb|ADMF01000020.1| GENE 19 23601 - 24749 1322 382 aa, chain + ## HITS:1 COG:CC1071 KEGG:ns NR:ns ## COG: CC1071 COG0079 # Protein_GI_number: 16125323 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Caulobacter vibrioides # 2 366 10 376 409 149 33.0 1e-35 MAIQRRRMLTAALGGAFSASLLTAGRVDAAPAPVFEKPTADNPIIACYNENPLGLSAAAR KAVADSAAVANRYPFVRCEVLRKACAQLIGGKPEEIVLSQGSAEAIRASVEAHNGPGASL VTAELTYSDGQMAAVRNNIPVIKVKMGLNWSMDIPAMKAAAAEAAKKGTAIVYFVNPNNP TSTIADTNALFDWIRGKPANTVFILDEAYAEFVEDKSYRSAAELVREGLDNVIVLKTFSK IFAMAGLRLGFAYAAPERVKKVHDHIAYDFFQNTPAIEAALAEMNDKAFLKQSLEETLES RRIMEEVLKELQLEYLPSQTNFVFFNLKKPLKVFADAMKAENIMVGRPFPPATTWCRVSY VRPAEMKYVADVMRALRTKGVI >gi|319804905|gb|ADMF01000020.1| GENE 20 24892 - 26508 1401 538 aa, chain + ## HITS:1 COG:BH0867 KEGG:ns NR:ns ## COG: BH0867 COG0405 # Protein_GI_number: 15613430 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Bacillus halodurans # 3 538 2 539 539 586 55.0 1e-167 MQAIPFDPLDYPHPSRRTVVYARNGMTCAGNPTAASVGLQVLLKGGNAVDAAVAMAAVMP LAEPTGNGLGSDAFVMVWKDGKLYGLNGSGPSPKAASIEALRAKGCEKIPAYGVLASDVP GAVGAWAAVHERFGQLQFADVLAPAIEYAENGFPVSPTVADLWRRAVKLYSGMRSDAQFE PWFTHFAPQNRAPDPGESFRSPDMAATLKRIAETKGEAFYRGEIAEKIAAFFAAHGGLLT ADDLAAWRPEWVEPLSVNYRGYDVWEMPPNGHGITVLMALKTLSGMQLGAPLTAETMHQQ IEAMKLAMSDTAEHVTEPSAMRVTTDELLSDAYAAKRRALIGEEALLPKAGDPRGSSTVY FCTADRDGMMVSFIQSNYRGFGSGIVIPGTGISMNDRMENFRFDPAHANCLEGGKRPYHT IIPGFLSKEGKAVGPFGIMGGFMQPQAHVQVVENLIDWHLNPQQALDSPRWQWIGGKKID IEADVPPAEVLKLIRRGHEVTVKADLTAMGRGQMILRAPDGTLCGATEKRSDGQIMSY >gi|319804905|gb|ADMF01000020.1| GENE 21 26719 - 26898 162 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVSEFITDAPSAMPAEASVLPLEPIKVDEVLRRIAVGIVFTIGVGALLTIAAAFAMRL >gi|319804905|gb|ADMF01000020.1| GENE 22 27001 - 28296 1242 431 aa, chain - ## HITS:1 COG:CPn0289 KEGG:ns NR:ns ## COG: CPn0289 COG1301 # Protein_GI_number: 15618209 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Chlamydophila pneumoniae CWL029 # 55 421 37 395 395 254 39.0 2e-67 MSTTPNNDAPASEALAAKSQQSGISGRMLAIFYLIAIVLGIVNGIWGSSATQSFADFIAT MFIRLFKFVAIPIIAVSIISTLSSISKSRSSGRIFRHTIFYTLFTTILAATLAALLYEVF SPENVSASISGAAAAPLSSVANAGGAGYLKYIESVIPDNILAPFLSANVLSVLLISAAVG IALAQMKPSKAQETLVSLFAGLQEVLFRIVSWIIKVLPIGIFGFFSVLAADLASGVELGG LGVYFAAVLTANFVQMLVILPLVLLARGLNPLKVAKAMLPALTVAFFSKSSAGTLPVTMA SAENRLGVRRPVSRFVLPICTTINMNGCAAFILLTVVYLMQNAGADITLGTLIVWILIST LAAVGNAGVPMGCFFLSASLLAGMNVPILLMGVILPFYAVVDAIETALNVWSDSCVAAMV DHDLKDETFDA >gi|319804905|gb|ADMF01000020.1| GENE 23 28445 - 30013 1527 522 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 39 480 60 498 502 220 32.0 7e-57 MLLATAAGTASAAVLLPREVRADATADADSTGFCPFYCDVAVVGAGAAGLTAAVTAAQTG ARVLVLEKMRMVGGNSILAEDALTAVDDQRGKQWSDDAKREILAEKHALLAEMRRRGRTI NAELDEELIDDSLAAVQWLQSIGCDLETSETRPGSRHVREYRAKEGLSLGSEVIGELLAR AEVAGVPVITNARVVQLTQEPSMHIDLEALTMSGRRIKVHAKTVILATGGYAGSLDVVRR NCPNCPQLLTTNVAGATGDGIWLAENLGAAIVDRDAVMLHPTTHALTGTLISKPLRKAGA ILVNSKGKRFTNELDVPENVARAVLAQPGGWAWLIGDSSHFDSVLFERLTATASITREYS IARLADSLNIDLSDLGETLEYCRITGATSGPFARPLPATKFVTPPYFAIRIRPAIHGSLG GIRVDANAHVLDRQGRVIPKIFAAGDTVGGIYGRVRFDNFGLIGAIVFGRLAGKNAAAEA LAPSQTAPAVQRAETPAQTSHQQASADPQLDANNTETETNGG >gi|319804905|gb|ADMF01000020.1| GENE 24 30680 - 33790 3899 1036 aa, chain + ## HITS:1 COG:fdnG KEGG:ns NR:ns ## COG: fdnG COG0243 # Protein_GI_number: 16129433 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Escherichia coli K12 # 1 1035 1 1015 1015 796 42.0 0 MELSRRSFLKRGLILGTTPVAAGLASTAAMAASSTKKPYKLANVQEYFNICCYCAGGCGT IVSNRNGELINIEGDPDHPVNLGGLCPKGATLWGLRQVVTPDRKVKPNPNRFLYPMVRRP GSKEWERISWDEAFDGIARHVKKTRDETFVQTEDGYTVNRAEGFAFLGGSQINNEECWLL QKFCRTLGSIAIDNQTRVCHSSTVAGLGPSFGRGSMTSHWCDFANADVILTAGSNNVENH PLSSRWVQRAQDKGATWIVIDPRFTRSAKNADIYGRIRPGTDIAFWGGLISYIINNKLYQ EEYVLNYTNAACILTKDYDFDPKTGLFTGFDEASKSYSAESWGYDVERFEQWDTTPTGKY AWVKKPGTPNFVPPELEILKRDMTLENPLCVLNVMKRHYDRYTPEMVAKVTGMDPDVMMK IWQVYAGTGKPGKAGALLYALGQTQHTYGGQNCRAMSIVQLLLGNIGVPGGGLNAMRGEP NVQGATDVACTVPDLPGYLKWPTAKKHRHLADYLHAETYADGYYSNKPKFMVSFLKEFFG ENATVENDYGYEMLPKIGPRLPASAWTTMGTFHMMRDGRIKGYFAWGMNPAHSTPNAKFA RNAMANLDWLVCADWFPTETATFWKAPDMDPAKIQTEVYFLPAALIYEKIGSISNSGRWV QWRQQGVLPPGEAKSDFEIIEVLFDRIRSLYQKEGGVYPDPILKANMDYKVDGKYDLRAV CWAINGYTVQDGKLLPGYAQLQADGSTACGMWIYSGYYNNEADKLDPMKQPTARRSKEDP SGMGLFSGWSFAWPANRRVLYNRASCDMKGRPWNPEKVFVEWKGDKWLQYDVGDFVTANP PDNKAFFMTWEQNARLFSYAMPDGPMPEHYEPFESPTKNLLNDSVQAPCALFTEDKDNRR GTSQDYPYVCTTYSVTEQWQTGAQTRSIPWLNELISCNFIELSEELAKEKGIKNGDTVRV WNNRGSVKVRAMVTIRMQPMQINGKLTHVVGMPHHFSWAGSFATGDNVNDLTPNVGDPVS FIPEYKAFLVNIEKAA >gi|319804905|gb|ADMF01000020.1| GENE 25 33825 - 34736 974 303 aa, chain + ## HITS:1 COG:HI0007 KEGG:ns NR:ns ## COG: HI0007 COG0437 # Protein_GI_number: 16271982 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Haemophilus influenzae # 6 260 34 281 312 190 41.0 2e-48 MADNKEVAMLFDSSHCTGCRGCQVACKQWNVLPASLELNANEKNFNGTYQGPLDLNGDTR LIMTFDEKPSGDKFHPVNWSIGRRSCYHCTDAGCVKACSSGALSKDERGVVKLDTDKCNG CTFCQAACPFDVPRFRPMDGRIDKCTLCIDRLDNGGIPACVKTCQPEALRFGPREEMLKK AHERVEFLKKKGFTKAEVYGENECGGLHVIHVCAYGHEAYGLPTDPKPKAVLNGIDIIKP VTAVGTAAVIGALAVSFLANLGYRRREVTLEEAKAHWTPEQRALAEREAREALKKVQSGK DAH >gi|319804905|gb|ADMF01000020.1| GENE 26 34746 - 35465 1015 239 aa, chain + ## HITS:1 COG:no KEGG:Elen_1680 NR:ns ## KEGG: Elen_1680 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: Glyoxylate and dicarboxylate metabolism [PATH:ele00630]; Methane metabolism [PATH:ele00680]; Metabolic pathways [PATH:ele01100] # 3 236 30 253 255 234 53.0 3e-60 MTRYIQRHSLLTRVTHGVAAITCILLAVTGLFVFWPELGGSIMGGEFTYWMRMLHRVFAI PFILVPLYAVFKSPKGAAHLFKEDIFGKWDKDDYKWAMLFPFYLFAPSKIHMPPQHHVKS AQRLADGALVFFCIIMALTGLVLWLNTGLLPNGGMKVAFSNEVLLWARMLHDIFFCLTVI VGIAHIYLGAGIFQPYRGTARIMFGDGKVSESDALYHWGYWANEELTTGKNVTIEKRAE >gi|319804905|gb|ADMF01000020.1| GENE 27 35803 - 36777 1091 324 aa, chain + ## HITS:1 COG:no KEGG:Elen_1679 NR:ns ## KEGG: Elen_1679 # Name: not_defined # Def: formate dehydrogenase accessory protein # Organism: E.lenta # Pathway: not_defined # 1 291 1 283 300 95 29.0 2e-18 MNPKSIERALDRYRAFKDEDVRRRLAIFGPLILEAAAISNELDDEDVVVEREPTADETIA ASKPNGTPLLRAGFVRINADSFCRCAKHLGSVLLKSLELDEKLGSAAQHFDFAPYCTEAL VRTASENPHGYLEAVVKLWDSGDADEALLDIFVLPVLGETLRAYLTRFAEKASGLLERSE EQKPSYSRTNTCFCCGSEPDIAAVVETTLRGNVKKLFCSTCGASWLYERIRCVRCGNDVV SELTYISDETDDMHRMHVCSKCGGAMPTLFAMGDELTFSADIEAIVLTGLEEAYDAAVRE GTVPKPILKPVDSTQVGRAPGRQN >gi|319804905|gb|ADMF01000020.1| GENE 28 36835 - 37719 1039 294 aa, chain + ## HITS:1 COG:YPO4060 KEGG:ns NR:ns ## COG: YPO4060 COG1526 # Protein_GI_number: 16124174 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Yersinia pestis # 48 287 35 273 274 300 60.0 2e-81 MTQMIPTDNAAFLNAFGMIVGGDTGLNASARRVEIVRIAQSTSGSDVDYVAEEVPIALVY NGISHAVMMATPAQLEEFGIGFSLAEGIVADLSEIYGVEVTEGCRGGKNIELTIASENFW KLKEFRRSMTGRTGCGICGVESLEGAVRPTPRVPFTQTFDLQHYERALNYLHEIEELGRL TGATHAAAWVNVDGSLAGGAEDVGRHVALDKLLGLRAKQGWTEGALVISSRASYEMVQKA AMTGVEIIFAVSAPTALAIEVAQKAGITLAAFCRCGRANVYTHPERLIGLGEQT >gi|319804905|gb|ADMF01000020.1| GENE 29 37906 - 39294 761 462 aa, chain + ## HITS:1 COG:YPO3206 KEGG:ns NR:ns ## COG: YPO3206 COG0420 # Protein_GI_number: 16123367 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Yersinia pestis # 15 320 1 299 414 152 31.0 1e-36 MPSSVDAPVEKRRAVRIFHTSDWHLGRQTADVDRTEDFRSFLTWLLGQISERRPDVLLIA GDIFDTTMPSSDAQRLYYDFLTKASQTALRAVVVTAGNHDSLRFLRAPEVLLSTIRTIVA GNTPETEAVVIRDAAGVPMLGIAAVPYLREGDVRLSGVSDSETDRRRAWENGVRAHYDAV HQKLVEWVGPEVPLVAMGHLFVAGSSVGGAAESVSASSDEADASVYVGSLRNVSAAAFGE GWRYIALGHIHRPQAAAGSNGTAWYCGSPLMLDFGAISDKQQILEVVITDHGVEKHAIHV PQPRILTRISGTLEALQLRLLEVGREAPGAVVEVFFTGAATDANTVVQTLQRSAEHAGVH LAAVRIGTPEGLRGWDMPERRLDDITPEEVFRSVLERSGADDIVREELEPLFAEALEAGR ELMREADARRAEIVSDLAGRGTHQENEIDAKETGHAALETQN >gi|319804905|gb|ADMF01000020.1| GENE 30 39269 - 42622 2316 1117 aa, chain + ## HITS:1 COG:STM0395 KEGG:ns NR:ns ## COG: STM0395 COG0419 # Protein_GI_number: 16763775 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Salmonella typhimurium LT2 # 1 308 1 292 1046 138 34.0 5e-32 MRLLKLRIENINSLAGRYEIDFTNRDYIESGIFAIVGPTGSGKTTILDAVTLALFGKTPR METRTSTSKKTDRGCMVLTEGRKQCSASVVFESMGKFWRSRWSVRLKRTGEPRDAQVELV RLPDGSAETGEIVAEQKLAWNAKVPEVLGMDYETFTRSALLAQGAFTELLRAQVDDRAAI LEKITGTKLYSTIGQWVFERCRDENNKVKRLLVHLEGAEMLAEDARKALETALETTADEA KHVRFRRSELEADLRWIRQTTAARARLKDAEQSFVQAEKAAQASQALKREAAAARLAVEP LAERRRMLDCLASAEAHRREAAQYEAAQVQAQAHQAQAQGAADAARRAALQAAENEAKKI PELEQMEEKDKCLAIADAEAQASSAALADAQARSLRADAEVQKCAAALKSAEDERRRALG ALEMLQGDRELAVHLPAAAAAAEAYVDAKKHSLNAKSAAALGEKKIAADKVKADEAHDAA VKAQAAMEAAALRLQDAQRLQAAVYQEGSIEAKLVEMRRFTGRAWAAQWLLECGELLALL SEMPSGDKTSRMRGVLTQRIAALRSAYPQDFAEALTPQRAAGFNTVLDAIEAWSKNAEAA DKGLALVRAEEVKAVNAFHEAQAADVRASARLRAAQESLEQLQAQQRESAERLQVRRDAF LLAAKHCFAADTDSKSVLAEPQSFLNEAEARRQRYAAAEVSAQKTQEKLSAASAAANAAA AQKRGADEAQAAASERAQAAHQAAQDVRKDRENKFGQRSAQAERRELAYRVRSSREKERD AAQASAQAAQHLKTIEATLSAEKKAAQEFAQKTEDAKARFSELLASAAFADEAALLAAAR DPARIRELEQTAEAAGQAYAAAESNRATAQSDLEALLQMPRRDVQEAEAAAELAQAEERA SEAERRLGSLRQQLEADDAVRRKAALIEAELKTARTSADKWAKLSGLIGSADGKTFRLAA QSLTFALLLHEANVILSRMQSRYQLIPAGSQKLDLAVRDLELAGLERTSFNLSGGETFLV SLALALALSRVSSSRMQVDTLFLDEGFGTLDPDTLEKALNALEMMLQQKTGKLIGIISHV RAVRERVGVHIVVKPRGTSGESEVSGPGVRFEAQPAA >gi|319804905|gb|ADMF01000020.1| GENE 31 42730 - 44046 1512 438 aa, chain - ## HITS:1 COG:RSc1370 KEGG:ns NR:ns ## COG: RSc1370 COG0477 # Protein_GI_number: 17546089 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 1 438 1 438 438 446 62.0 1e-125 MKRGFYTIMAAQFLSSLADNALLIAAIALLASLGAPEWQTPLLKLFFVVSYVLLAAWVGI FADSMPKGRVMFLTNFLKAVGCLLMLFGGHPLLAYAIVGIGAAAYSPAKYGILTELLPAE KLVIANGWIEGLTVGSIILGVVLGGVLIKPEIASPILSLFHLNAIGLTSFAEAAIFAITF VYVAASIVNLAIPDTGARYPKQKFDPIDSIRGFMTSCRLLWHDRLGQISLSVTTLFWGAG AVLQFLVLKWCDHALGMSLSEGAVMQAVVSLGIAVGAVLAAARVPLVKSLSVLPMGIIMG ALVMCMAFFTRADAPAGGIELFGQSLSWAVIIASIGMIAVGICAGFFVVPMNALLQHRGH VLMSAGRSIAVQNFNENLSILTMLGVYSLLIKLDLSVPATMLTFGGFVMVSMALVILKHH RNQREFDSTHLIGEDKRH >gi|319804905|gb|ADMF01000020.1| GENE 32 44370 - 45443 932 357 aa, chain + ## HITS:1 COG:dadX KEGG:ns NR:ns ## COG: dadX COG0787 # Protein_GI_number: 16129153 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Escherichia coli K12 # 1 354 1 354 356 296 46.0 6e-80 MPRPISAEIDLEALRHNLGVMRSKAAGRALWAVVKANAYGHGLDNAVTAFADADGLATID LCDAEIVRRCGWHKRILLLEGFFDAADIEPLQTLKVETVVHSPWQIAILRAAKPKDVRVH VKVNSGMNRLGFRPSEAPAAAAQLAAIPGVRVMDYVTHFANAEQSAVHAPVTVDDQLAAM GGLAREQACLANTGAILFHPEVQGQAVRAGVALYGVSPDEAVTSEALSLIPAMTLGAEII ALQQVRPGESVGYGSRWTAQRPSRIAVVACGYADGYPRSMPDGAPVWVEGSQAPLAGAVS MDMLTIDVTDIPEADVGSKVELWGRHIAVNDLARRCGTIGYELLCALARRVPLVLKG >gi|319804905|gb|ADMF01000020.1| GENE 33 45448 - 46836 1179 462 aa, chain + ## HITS:1 COG:NMA0992 KEGG:ns NR:ns ## COG: NMA0992 COG1066 # Protein_GI_number: 15793949 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Neisseria meningitidis Z2491 # 1 458 1 453 459 558 61.0 1e-159 MAKKDRIEFVCSECGGTTAKWMGQCPHCKAWNTLKEFRVATGAAARYGADSRSGRGFVDT TGALQDLSDVAAEDAPRIVTGLSEFDRVMGGGLVKGGVSLIGGDPGIGKSTLLLQVMARL AAAGLSCIYVSGEESAAQIALRAQRLQLPTTGLKLMSEIELEHIEAVINEKRPEFVVIDS IQTLFSGALDSAPGSVSQVRECAARLTRAAKTSGASLFFVGHVTKEGSLAGPRVLEHIVD TVLYFEGDTHSNFRLVRAFKNRFGAVNELGVFAMTDHGLRGVTNPSAIFLSEYKSNVPGS TVLVTQEGTRPLLVEVQALVDETHLPAPRRLAVGFDGQRLAMLLAVLHRHAGVALFDQDV FVNAVGGVKISETAADLAILAAICSSWRNRPLERGLVVFGEVGLAGEIRPAARGQERLRE AAKLGFSKALIPRANMPRQPVEGLDIIPVDRLSDALEVVLGG >gi|319804905|gb|ADMF01000020.1| GENE 34 47034 - 47969 431 311 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|163750634|ref|ZP_02157871.1| ## NR: gi|163750634|ref|ZP_02157871.1| peptidyl-prolyl cis-trans isomerase SlyD [Shewanella benthica KT99] # 180 290 148 250 272 67 43.0 1e-09 MSTLTKLLPANAAPAQTLLDKAHALPLTSAQRAELPQVIHTPEGEVELGVPADQLRPVEV NDVFVDEKGGFWAVRPAVEKVLNVTGDVNVLREAAGALVNRGVRIAQIEEGFAVLPLPNL AKMLQMVGLEVTEAESPFDPIQFKAAHGGCGCGCHDDEDSCGCGHHHHHHDHDGECCCGG HGHEHKHGEGECCCGHDHHEHDHEEGECCCGGHDHEHKHGEGECCCGHDHHEHDHEEGEC CCGGHGHEHKHGEGECCCGHDHHEHDHEEGECCCGGHGHEHKHGEGEGCCGHHHESNEEK KPGGCGCGGKH >gi|319804905|gb|ADMF01000020.1| GENE 35 47833 - 48087 58 84 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKVNAAAADTATSISTVKAKAAAAIITRATRKRSRVAAAAAASTKLSLVLGQLRREKYS PQSEFTKSGVCGCRLFYCRYRLTA >gi|319804905|gb|ADMF01000020.1| GENE 36 48106 - 48315 107 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238789863|ref|ZP_04633644.1| ## NR: gi|238789863|ref|ZP_04633644.1| Transcriptional regulator [Yersinia frederiksenii ATCC 33641] # 1 69 1 69 318 71 47.0 2e-11 MQRPNIDTDALFLFSAIFRTGSLTKAAQECAMSVGGASRTLAKLRELLDDDLFLRTNRGL VPTPRAREL >gi|319804905|gb|ADMF01000020.1| GENE 37 48251 - 49069 286 272 aa, chain + ## HITS:1 COG:mlr6182 KEGG:ns NR:ns ## COG: mlr6182 COG0583 # Protein_GI_number: 13475165 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 43 255 90 295 301 59 24.0 5e-09 MTIFFFELIEVWFPRRALVNCELNGGVAELLVNYGRLFEKEVFRPSDVRRIFRILCVDNA IFTFLTPSVSALLEKAPSIGVEFRPIRADFGRLLSSGEADFAIFPFVPSDPNLHSLRLAD DVFVLVCGRHHPLVKLAQERTLTRKDFKAYRQIRVMTGPLNDLDDPWFDAEADIPLMAEN IAVWSPFFIPIAQILCQTNLWGALPLQLAVQLQKLMPDLIILGRPKNAVVYGPTLIWHNR TRQDPASVWVRSVIVSAPKTLADVNSIHFIED >gi|319804905|gb|ADMF01000020.1| GENE 38 49056 - 49289 69 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAAATARAIHFIFITKSPFSECRNKRNCIVEIVPFQAERDETQYEELAEITKSGLAQDCV ADLEDRFLQKEKTVSPQ >gi|319804905|gb|ADMF01000020.1| GENE 39 49249 - 51066 2388 605 aa, chain + ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 1 602 5 611 611 888 70.0 0 MKMKWIALAVAAAIPAAAMAIGGASGPKIDYEVQGHIGEVMGNPYGIAPLTAVIRDGGYT LADVTVHIVPKQGGQKISYKVSRSQLLTHGGVPVFGLYPDYLNTIRVDYTRIDTTGKKEK FSDEYKLYAPPVYFEPAGNTMERMMPFEAEVKKADPEFSDRLYFVNNFGQKSSIGTRAVW NNPTGGALEWNYWPQNTVIDTKGEVRWFMFANPIYDLNSLYSAGVMMGFKQNADGLLTWG FGQRYVKYDILGREVFNRRLPMRYGDFSHSMDDADNGHYFLRVSSSNWKRADGKNVRTVR DVIAEVDQNGNVVDEWRLAEILDPYRDNVMKVLDQGAVCLNIDASQAGKTLTAEEIAKLD ASDKFGDIVGTGPGRNWAHVNSVDYDPEDDSIIISSRHQSAIIKIGRDKKVKWILSSPEG WKKGWAEKVLTPIDANGGKIKCSGSKCEGEFDWTWTQHTAFKIDEKSKGDIIYVSAFDNG DARGMEQPPLPEMKYSRSVVYKIDQKKMTVEQIWAYGKERGHDWYSPVTSLTEYQADKNS IFVYSATAGASFDMASGAFTSAPNPYIEEFKWGAKEPSVEIQLKNCTGYQAWPFSVEKAL SQEVK >gi|319804905|gb|ADMF01000020.1| GENE 40 51091 - 51339 200 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKFSDAFSLDLKNPNTRKQILRSYCVNFHKNNSNKLYRKKLRGFASDLDPPKLVCGSWGL IIVHTGLTQTKTGAKFIAPVFD >gi|319804905|gb|ADMF01000020.1| GENE 41 51245 - 51649 276 134 aa, chain - ## HITS:1 COG:no KEGG:plu3215 NR:ns ## KEGG: plu3215 # Name: not_defined # Def: hypothetical protein # Organism: P.luminescens # Pathway: not_defined # 9 130 8 129 133 93 37.0 3e-18 MTEFCPNAKATILAIAGKIDHLHIICTKQFFYKDTGAQSVLAVNVSSIREKGTYDGTCVL RAGDHPFITHDSYIRYKDAVVMRVEKLISAVNSGEITVMENVSDEVFGRILAGFEKSEYT KTNIKKLLRKLSQE >gi|319804905|gb|ADMF01000020.1| GENE 42 51646 - 52065 248 139 aa, chain - ## HITS:1 COG:no KEGG:HS_0537 NR:ns ## KEGG: HS_0537 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus # Pathway: not_defined # 3 131 53 185 195 94 38.0 1e-18 MVSMPYGPVLSATYDCFMGDREYWDSWIINPGNYDLALNSSIKVDPADPLDTFDELSVAE KTVLDSVYSKFGASNRWDLVKLLHDPDYCPEWENPQGSSYPIHIKSLLMKNGKTKEETDA ILEKIREEEDLQVVTQRLS >gi|319804905|gb|ADMF01000020.1| GENE 43 52785 - 53330 497 181 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYKTAALFVVLVTSLVGCSTTLAPQRNASGTSTETVRPIHQQEDEAEPQSYRERIEVVV QRMRAACVAQDNQPYYRKTACLPSGITDEMTKDSTRITAAQKRAAEAVFAFTHELNEETR RIMRETQDPALAARAELSQRLRDPQINTLQEDLLSGKITWGEYNTARRALAEAVRSDLEN E >gi|319804905|gb|ADMF01000020.1| GENE 44 53597 - 54958 1841 453 aa, chain + ## HITS:1 COG:RSc1710 KEGG:ns NR:ns ## COG: RSc1710 COG0544 # Protein_GI_number: 17546429 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Ralstonia solanacearum # 28 448 11 441 449 263 37.0 5e-70 MTEEKTEQAVEQAAAPETKKEEAPAVSLERTLELSVPSAQVRELAQKHLRGYAKDARMPG FRKGHVPMKQVEAMYGMRAFDEALNELVGQAWSKAAQASGLQIAGAPKVEAVEGANGDEE TMRFTAKFEVFPEITYPDFKALNLKRYTSTVDDAAVEETINVMRKQRVTYTEAAADRAAQ KDDRVTVNFTGTKEGIEFPGGKAEGFQFVIGSGRMLAEFDAAVAGMKAGESKTFDLTFPK EYGPADLNGATVQFLVEVTKVEEPHFPTIDDEFAQSLGVKDGVAAMRADVKKNLEREVSY RLEQRTAAEVFSALDKVLTFPVPAAVVEEERRAMAQQYAQAMRSRGLEAPKDIPDSMFQE PAVKKARVGLFISEVVQREKLTATDEQITARAQSIAASYENPAEVVQYLTTDRQSRVNVA MQVQEENVTNWLLGQATTEEVPVEFDKVMKGEF >gi|319804905|gb|ADMF01000020.1| GENE 45 55286 - 55876 743 196 aa, chain + ## HITS:1 COG:RSc1711 KEGG:ns NR:ns ## COG: RSc1711 COG0740 # Protein_GI_number: 17546430 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Ralstonia solanacearum # 1 194 23 216 217 280 69.0 2e-75 MSLVPIVVESSGRSERSFDIYSRLLRDRIIFLTTEVNDQTASLIVAQLLFLESEDPDKDI SLYINSPGGSVSAGMSIFDTMRFIRPKVNTICLGMAASMGAFLLAAGEKGKRYALPHSRI MIHQPLGGAEGQASDVEIRARQLLLIKRQMNELMAGFTGRSYDELVRDTDRDNFMSAQEA LEYGLIDRVLTSRADL >gi|319804905|gb|ADMF01000020.1| GENE 46 56072 - 57406 250 444 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 181 425 267 455 466 100 32 2e-20 MAKRYCSFCGRDESQCSSLFQGLHGELLCGDCVRLMASELTGATTGGKPAEEPAAETPQA TAPAKIPTPRELYELLDNYVIGQERAKRTLSVAVFNHYKRLNTLGDKKLKALEDKVELQK SNVLLIGPTGSGKTLLAQTLARALDVPFAIADATTLTEAGYVGEDVENIVAKLVQAAGGD IERAQKGIIYLDEIDKIARKSENPSITRDVSGEGVQQALLKLVEGTIASMPVKGGRKNPG KAMMEVDTSQILFICGGAFDGMERIVRHRTEKSEIGFSGTVVGKKDHNLTDVFRQIETGD LVKYGLIPELVGRLPVITVLEELNEEALIEILTKPKNAIVRQYQVLFAMEDVDIEFTPEA LKAIAHQAIERKTGARGLRSIIEALLLDTMFEIPSRTDVAKVIVTEAVVTAKAKPEYVLR TAEQIEALKAEKAAAQAAPQSSQV >gi|319804905|gb|ADMF01000020.1| GENE 47 57520 - 59982 2800 820 aa, chain + ## HITS:1 COG:RSc1713 KEGG:ns NR:ns ## COG: RSc1713 COG0466 # Protein_GI_number: 17546432 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Ralstonia solanacearum # 19 789 14 776 806 825 57.0 0 MNDNKTPNNEATAAAAGPLPVIPLRDMVVIPNSMTTVFMGRQISVLAAEAAMRVHSGRVI LLTQREKSIDSPKPEDFWDVGVLGEVDQLLRLPDGSVKALVHGTQRCRVTSWTDASGFYK ATAEELPTEDVSEDLAAYQRTLNRQLLDYAQNVKKLTPEHLRPVTEETDPVRACDVAASF IPLTTAERLDFLRASNPVRRYEILIGVLDRELESGQVEKRIQMRVKGQMEKNQREYYLNE QMKAIKKELGLDPETAEAEEEEAKLERQVRDAQMPKEAEEAALTEIKRLKTMPPSSSEAS VVRSYVETLLELPWKKKSRVNRDIERARRVLDEDHWGLEKVKERILEYLAVQKRVGKVKS PILCLVGGPGVGKTSLGRSIARATNREYVRMALGGVSDEAEIRGHRRTYVGAMPGQVIKH MIKAKVKNPLFLLDEIDKIGANHRGDPAAALLEVLDPEQNNAFEDHYVETPFDLSDVLFV ATSNSYDIPPALLDRMEVISLSGYTEDEKVHITMRHLIPKQMRVNGVKENEVVVEESAVR DIIRYYTREAGVRSLERAVGKILRKIVLTELEAPKDKRPTELPIRVTAETLEKYLGVRRF SITSAQREPQVGIVNGLSWSEVGGDILMIEAVAFPGKGQVLRTGMLGDVMKESVEAARSV VRARAKQLGLKSDIFANTDWHIHFPEGAIPKDGPSAGAAIVTAMTSALTGIPVRSDLAMT GEITLRGEVLPIGGLKEKLLAAQRGGVKTVLIPQENMKDLTEIKEDALKGLEIVPVKHIE EVLARALVRQPTPLTDDAEATLMPPKMSSAPNTPAAQPSA >gi|319804905|gb|ADMF01000020.1| GENE 48 61050 - 62951 2646 633 aa, chain + ## HITS:1 COG:RSc1715 KEGG:ns NR:ns ## COG: RSc1715 COG0760 # Protein_GI_number: 17546434 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Ralstonia solanacearum # 1 611 1 623 648 350 35.0 6e-96 MLQAFREHKRWLMVIAMVFIIPSFVVTGIYSYNRMTQSDNSIVKVGEVSITPENFDLAKR QQLERLRQEMGESFHASLLDTPQAREDLLRMLMDEAAINQVVAKNHISVSEAQAVALIKN ADALKVDGKFSAERYEQFLRSQGKSDQQFVMEIRNDLAKEAVVSGVSATYPVPKALTEQF YEILTEERSVRTLVLPADDYLDKVAVTDEEIKAYYNAHLKDFLSPEHIKAQYVVFSPDAF SNQKASLDDLKTFYEQNKQRWTVPEERRASHILIEFGDDKEAARKKAEELANEVKADPSK FAELAKANSVDTGSAEQGGDLSFFGRGVMTKAFEDAVFNAKKGDIVGPIETEFGWHVIYV TDIHPAAVEPFEDVKSEIEREYAQQQAIREFSTHADEFTNLVYEQSDTLEPAAAKFGLKV ETADFVTRNGVTDPELSQIITEHVAESLFGTEALKEKRNTSAIEVSGNRLVSARVVEYFP EAERPLDEVKGLITDALKRQKAGAMAIEAGQAKLASVQQAKSVDGFGDEMWISRRAPQNQ EVTVVNAALAVPTAKLPIYTNAVLADGSYVVIYVKEAKKHEAKPEDLAGITRELSSVYGE SDRRGYLDALEHSLGVVVQRPDFVKGEAKQTEE >gi|319804905|gb|ADMF01000020.1| GENE 49 63091 - 64650 1820 519 aa, chain - ## HITS:1 COG:BS_gntK KEGG:ns NR:ns ## COG: BS_gntK COG1070 # Protein_GI_number: 16081058 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Bacillus subtilis # 1 501 1 495 513 146 25.0 8e-35 MGKLYMGFDAGTQSVKVAVYDEQFRLVTSRSLPTSLTYPQPGWVEMDVNTYLDNCVVCMA ETTSELRRLGFDPKDVSAIMGDGIICGIVGIDENADPVTPYINYLDSRTMADVETINAKK LDIWSRETGNPEASPMFPAMFARWFIANSEAFRTKGVKFVHNAPYILMRLAGLKGKDAFI DWGAMSGWGLGYDVQKKCWSEEQLHILGIDPQYMPTIRKPWDIVGGLCEAMSVRTGLPAG IPILAGAGDTMQSMLGSGVFEANQGVDVAGTCAMFCVSTSGIVPELSKPGMGLIFNSGTL PDSYFYWGFVRTGGLSLRWFKDHVARHEGDGSYYGTLSEGAAKVPAGAGGVQFLPYLTGG YGEEKEASGCFLNMTMDDNQFVMWRAVLEAIGYDYMGLADSYRAAGVPLKRITVTEGGSR DGLWNQIKSNMLGAEVVRFENPGGAVLTNCVFGAYAAGDLEGVDDVKAALGSVIKRSGVY KPEAALTRRYRELFENRQKLVREDLKAAFSRLVKMRAIH >gi|319804905|gb|ADMF01000020.1| GENE 50 64967 - 65305 97 112 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSFSGCQPILAKIITLRAIALKRIIWIICIASFNIAKIITLRAIALKHHSFNGLEATCF AKIITLRAIALKRCVCVCLFRQLLGSEDHNATSYSTETVSTGGKTELHMRRS >gi|319804905|gb|ADMF01000020.1| GENE 51 66015 - 66527 157 170 aa, chain - ## HITS:1 COG:no KEGG:WS1617 NR:ns ## KEGG: WS1617 # Name: not_defined # Def: hypothetical protein # Organism: W.succinogenes # Pathway: not_defined # 4 170 29 193 193 103 30.0 2e-21 MRGIQPVGPMWLQQGLNHHVREEMLAKRRKLSRFGISPQSFRFLEDIKLYNDSLGLHGIC DGAIFTAKEVIPLEFKLSEVSPPMGARLQLAAYAMLLEYQEKRKISRRFVLYGQKGHTLE VIVDIKLRAEVHTVANLIREACKKAIVPHTAATESQCAQCEYQNFCADRF >gi|319804905|gb|ADMF01000020.1| GENE 52 66589 - 66885 212 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859663|gb|EFL82742.1| ## NR: gi|302859663|gb|EFL82742.1| CRISPR-associated protein Cas2 [Burkholderiales bacterium 1_1_47] # 3 98 1 95 95 88 44.0 1e-16 MSIYAKYLVCYDVSSNSRRKKFSDALKDLGLVSMQGSVFYGDLKPAEVRALARKAAELLD PKEDKCFWFPCRLEVKNIQKCIGYDDWSFAEVDGHGTI >gi|319804905|gb|ADMF01000020.1| GENE 53 66898 - 67911 746 337 aa, chain - ## HITS:1 COG:alr0381 KEGG:ns NR:ns ## COG: alr0381 COG1518 # Protein_GI_number: 17227877 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Nostoc sp. PCC 7120 # 1 269 39 293 374 105 30.0 9e-23 MRYLTVSSFGTALGLSGERLVVHEADGRTWETALSRLRTIRIEKKGISVSTNLMLACAAR GIRLFLVDWRGVGVVALSGLHQHAVVSIREAQFLAIHSSQGRTIAAEMIIAKIRNQRTVL LYFWKYLNKSAPEKAEKLREAADTIAKIVTKTKAEIENLQTWNEGIWSTILMGYEGAAAT LYWQALRTAELVPETFLTREGRGSVEIVNAALNYGYAILQSYIWSALDNAGFELYAGFLH RRRPGKPSLVLDVMEEYRAWVVDRNIIKLRSMLKNSKRGLTQEIKSAIVNAIDETMANAV SWQGKSVRLENALQRQAYRLAGTVVDGKRYKSIRFRW >gi|319804905|gb|ADMF01000020.1| GENE 54 67908 - 72176 1587 1422 aa, chain - ## HITS:1 COG:no KEGG:lpp0160 NR:ns ## KEGG: lpp0160 # Name: not_defined # Def: hypothetical protein # Organism: L.pneumophila_Paris # Pathway: not_defined # 12 1358 10 1317 1372 444 29.0 1e-122 MTQSERRFSCSIGIDMGAKYTGVFYALFDREELPTNLNSKAMTLVMPETGPRYVQAQRTA VRHRLRGQKRYTLARKLAFLVVDDMIKKQEKRLTDEEWKRGREALSGLLKRRGYSRPNAD GEDLTPLENVRADVFAAHPAFSTYFSEVRSLAEQWEEFTANISNVEKFLGDPNIPADKEF IEFAVAEGLIDKTEKKAYQSALSTLRANANVLTGLRQMGHKPRSEYFKAIEADLKKDSRL AKINEAFGGAERLARLLGNLSNLQLRAERWYFNAPDIMKDRGWEPDRFKKTLVRAFKFFH PAKDQNKQHLELIKQIENSEDIIETLCTLDPNRTIPPYEDQNNRRPPLDQTLLLSPEKLT RQYGEIWKTWSARLTSAEPTLAPAAEILERSTDRKSRVAVNGHEPLPTLAYQLSYALQRA FDRSKALDPYALRALAAGSKSNKLTSARTALENCIGGQNVKTFLDCARRYYREADDAKVG LWFDNADGLLERSDLHPPMKKKILPLLVANILQTDETTGQKFLDEIWRKQIKGRETVASR CARIETVRKSFGGGFNIAYNTAQYREVNKLPRNAQDKELLTIRDRVAETADFIAANLGLS DEQKRKFANPFSLAQFYTLIETEVSGFSATTLAVHLENAWRMTIKDAVINGETVRAAQCS RLPAETARPFDGLVRRLVDRQAWEIAKRVSTDIQSKVDFSNGIVDVSIFVEENKFEFSAS VADLKKNKRVKDKMLSEAEKLETRWLIKNERIKKASRGTCPYTGDRLAEGGEIDHILPRS LIKDARGIVFNAEPNLIYASSRGNQLKKNQRYSLSDLKANYRNEIFKTSNIAAITAEIED VVTKLQQTHRLKFFDLLNEHEQDCVRHALFLDDGSEARDAVLELLATQRRTRVNGTQIWM IKNLANKIREELQNWCKTTNNRLHFQAAATNVSDAKNLRLKLAQNQPDFEKPDIQPIASH SIDALCSFAVGSADAERDQNGFDYLDGKTVLGLYPQSCEVIHLQAKPQEEKSHFDSVAIF KEGIYAEQFLPIFTLNEKIWIGYETLNAKGERCGAIEVSGKQPKELLEMLAPFFNKPVGD LSAHATYRILKKPAYEFLAKAALQPLSAEEKRLAALLDALRYCTSRKSLMSLFMAANGKS LKKREDVLKPKLFQLKVELKGEKSFKLNGSLTLPVKQDWLRICDSPELADAFGKPCSADE LTSKLARIWKRPVMRDLAHAPVRREFSLPAIDNPSGGFRIRRTNLFGNELYQVHAINAKK YRGFASAGSNVDWSKGILFNELQHENLTECGGRFITSADVTPMSEWRKVVAEDNLSIWIA PGTEGRRYVRVETTFIQASHWFEQSVENWAITSPLSLPASFKVDKPAEFQKAVGTELSEL LGQPRSEIFIENVGNAKHIRFWYIVVSSNKKMNESYNNVSKS >gi|319804905|gb|ADMF01000020.1| GENE 55 73241 - 75208 1649 655 aa, chain + ## HITS:1 COG:RSc0976 KEGG:ns NR:ns ## COG: RSc0976 COG0187 # Protein_GI_number: 17545695 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Ralstonia solanacearum # 1 655 1 661 661 812 62.0 0 MAKKEEYGVEAIRVLKGLEPVKQRPGMYTLTDNPLHIIQEVIDNASDEVLAGYGKRISVE VAADGSVTVEDDGRGIPTGMHPEEHAPVLEIVFTRLHAGGKFAKADGSGPYTFAGGLHGV GVSVTNALSKHLVVTVWRDGQEATMGFRDGFVSEPLEIKKSSRPKSRTGTRVTVWPDPKY FDSPVIPEPALVRLLRSKAVLLPGCEVDYVNKMTGTEAHWKYSGGLKEYLLSEIKGESLI EPFEASGFADEDSESFSPGEGASWVVVWTAEGPLTRESYVNLIPTPQGGTHEAGLKDGLF QAVRAFMDAHGLQPKGVKILAEDVFSRVNFVLSTKSLDPQFQGQTKEKLTSRDAVKLVGG FVRPQFEFWLNDHADEGKKLVEHIISQAQARQRQAAKYERRRASTVAVLPGKLTDCESSD ITRNELFIVEGDSAGGSAKQGRDKEFQAVLPLRGKILNTWEVEGGELFRSDTIHDIALAI GVDPHHRDGEPDLKGLRYGKICILSDADVDGSHIQVLLLTLFFKHFPKLIELGHVYVAMP PLFRVDAPKKGRKPDRKIYCLDERELSRTLESLKKEGFTEEQLSISRFKGLGEMKAEQLA ETTLAPDTRKLLPVAFGSISEADTRTVMQTLMGERQVTGRRLWMEAYGDRAELDV >gi|319804905|gb|ADMF01000020.1| GENE 56 75285 - 77993 2642 902 aa, chain + ## HITS:1 COG:RSc0978 KEGG:ns NR:ns ## COG: RSc0978 COG0188 # Protein_GI_number: 17545697 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Ralstonia solanacearum # 101 850 10 762 781 777 55.0 0 MKKDDFEHDSLFGDLNADVPELDPSKQSQGAQAIQEKAADNDAAEAPETPEAAKEPNGSE PPETDELDADDAAPSPDDALEESPEEAATEEMAVGAATVGPAEEDGALTLARYASQAYLE YAMSVVKSRALPEVTDGQKPVQRRILIDMYRMGLKFEGRSVKSARIVGDVLGKYHPHGDQ SVYDALVRMAQTFSLRYPLLVAEGNFGSRDGDSAAAMRYTETRLTPISQLLLEEVDLGSV DFQPNYDGNFQEPVELPAKLPFVLLNGSSGIAVGMATEIPPHNLGEVAAACVRLLENPDA DLNEILELMPAPDFPCGGQIITPKDEIRAIYRSGRGKLRVRARWHFEDLARGQWQLVIDE LPPAASARSILDRIEQISNPRPKKDKKTLSAKQQQAKSAMLSLLDNVRDESGKSVDVRLV FEPKTSKVDRDEFVNYLLSETDLESNVPVNLVMLGLDGKPRQKGLLEILQDWIAFRLAVV RRRSEARLEKVLDRIHVLEGRSLVLLNIDRVIAIIRNADDPKADLIKEFGLTDRQADDIL EIRLKQLARLAAIAIEKELAQLAKERAGLEKILGSDGALKRQTAKEIEAAAKSFADPRRT VVEEAEQAAHEVQTADEPVTVVISRKGFLRARTGHGHDCSLMSFKTGDGLEATIECRSSS QISFLDQAGRVYTLAVSALPGGRGDGSPLSAFVDLPKGAQPAGWISADPNAAAVIVTSGG KGMVLKASDVSTRLKAGRDFVTLGEGESLLPPIELPLKAAQGEQLIACLSSSNRLLVFPL KEVRVTASGGKGMSFMTLETGESLVSVALVDERGAIVTGTGRGGKAREAQISKRILGGAT LHRARRGKVLALSWKAEHIAGLPLESTDSADGSDTAGGAPSDSVKTDDGLTLEVVDEDPT LL >gi|319804905|gb|ADMF01000020.1| GENE 57 78053 - 79948 1887 631 aa, chain + ## HITS:1 COG:RSp0979 KEGG:ns NR:ns ## COG: RSp0979 COG3850 # Protein_GI_number: 17549200 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Ralstonia solanacearum # 8 629 3 635 637 359 35.0 8e-99 MFILKYFKSLSARLLVLTLLWVSFVSGSIAWTMLVNWELEASASAKYAVGELRLHAYRAA YFSQTGSSRLDFDKELQAMLDGFKNVRSGDSWKPLLLPREPDIADKLDLLEGRWRGSIEP MFVRARELGKPVDEYALSGFLDEATNLAHRIEEWRSGYLWQLRYLQMLLIVLAIGSLFAI MLLLWRWVIRPINELGEGINRLSGGDLTARVTPRSEDEIGRIAQGFNRMADRLEDLYNNL EQKVAEKTASVEEKNRHLAQLYEITSFFSQQRGMEELTEGFVERIVRYTEADACLVTLVD AKQGAVNIAAASGLRPSDIHEAAEMAFEDSISRTVLQKNYPVRVRLENDQRPLAVVLARA GFSTAYCFKVRSVSESIGVYMLLFRDAPELSSQMIQLLESFSTHLGVAIDNQRLIERERQ FAVVQERQLLAQGLHDSIAQALSYLNLQVQFLSEAIKNKDDALRDESLSAIQTGVQECYQ DVRELLLNFRERVHSEGFLQGVQTVIDRFEGQSHVSARLRATGDGPKLTPRQKLQVIFII QEALSNVRKHAQATSVTVTIQNNDDLKVSIVDDGVGIDNDVVEARKGQHVGLSIMAERAA RIGAEVKVERASPIGGTRVTLLLPAAAREIS >gi|319804905|gb|ADMF01000020.1| GENE 58 80016 - 81374 782 452 aa, chain + ## HITS:1 COG:no KEGG:GFO_3330 NR:ns ## KEGG: GFO_3330 # Name: not_defined # Def: NlpC/P60 family protein # Organism: G.forsetii # Pathway: not_defined # 53 383 23 347 407 79 22.0 2e-13 MAFASNRSSADSCFILGGLLLTLSLAVWGSESACAAAQPSVSADYAVNVPAPGEAPSEER AAALWKNFADAEALDYRVDLLALQFGPAVSRLPGAAAVTGISAEPALLAKFFAAAARQGL SFESAVDQVPEPKSLDLMTWGIVKVGSAELMDLDPKTAGRTERTVRIVVLGERVRILKRT SATASEAPGWALVQCLDGRLGWISESWLALKNDMAFVSWNRQNAAVMRRPNTELCPENGD ALVFAGAGIQLYQLEHQPDYWEVLLPDGRKAKASGTALEDVSAWQQREEELRRSSPSAYL KALAASAEGLVGSKAEVLGAPLPVVVLRMHDLLAPGDIDRLARLGAPLSGGRDGAELKAG DLVFFGEHDEPQSAGIWLGEGRFAAVDPQTDRVAVLKLSDLRQNAKKTKTLGAFLWAVRL KPQELQNPCLLSSRSHPFFQTPPAELKRCQLR >gi|319804905|gb|ADMF01000020.1| GENE 59 81602 - 83419 2308 605 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 104 603 1 478 484 279 39.0 1e-74 MRKSMQLKAVAFAAVAALMGVSGLASASEAAQTAPSTFKPGTYTAQVNGHNAPLTVQVTV GKNRIEKIDYSKNLETIGVGRVALDIVSKKILDHQSVGVDAVTGATISSFALMQGVKDCL KQAGGDMTALTKHVEQHPAVEAQYQADVVVVGGGGAGLAAAISAYQAGAKHVLVLEKLGF LGGSTNVSEGALNAVDPVRQGRQGIEDSVAKFYDQTMKGGHNKGTPALVHYLTENSMNSV DWLEDLGVKFKDEIGTATGALWQRSHYPATPSGNTYIRTFEQVIGETNGAIKVMTDTKVT DLIKADGRIKGVMAENFGRKITVDAGAVVIATGGFGANIKMRQEFNTGVWKDVKLDKSIG CTNLAKAAQGDGLVMGKKVGAALIGLDDIQIHPCGTPGTGLMENIRTSGRNRIFVNLEGS RFVNEGAARDVLAKAIFAQPKGTYWIVVNHERYPSEDWVDANGATIRNMLALGSVVAAPT LDELAKKTGMDPKKLEASVAGYNAVVEGKAKDPLGFVANNKDDKTLTGGPWYACRKVPTV HHTMGGLEINTKAQVIGVDGKVIPGLYAAGEVTGGIHGSNRLGGNAIADVMVFGRTAGTN AATLK >gi|319804905|gb|ADMF01000020.1| GENE 60 83535 - 84257 668 240 aa, chain - ## HITS:1 COG:PM0381 KEGG:ns NR:ns ## COG: PM0381 COG0177 # Protein_GI_number: 15602246 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Pasteurella multocida # 8 201 17 210 210 269 65.0 4e-72 MAALAALNPNPKSELNYSTPFELLVAVMLSAQATDKGVNLATAKLFPVANTPQKILDLGL DGLIPYVQTINLYRTKAQHLIEACRILIDRFHGEVPRTRDELVSLPGVGRKTANVVMNVA FGEPAIAVDTHIFRVCNRTGFAPGKNPTEVEEKLLKVVPKDYLLNAHHWLLLFGRYICKA RNPECVRCPVAEYCSAPEKTEALAKAAEEAADLKPGSPAKKPRAKKKPTLPEAKSNDRSV >gi|319804905|gb|ADMF01000020.1| GENE 61 84350 - 84991 386 213 aa, chain - ## HITS:1 COG:RSc1006 KEGG:ns NR:ns ## COG: RSc1006 COG2878 # Protein_GI_number: 17545725 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Ralstonia solanacearum # 10 213 9 225 268 135 42.0 7e-32 MTLPPLRPSAQAIDDLLPQTECRQCGFDGCAAYAQAVADGLAPINRCAPGGARGIAELAK ATGLPVVALDPEYGTEMPFARAQIRAEECIGCSWCVRACPTDAIGGSPKHLHAVLEARCT GCSLCAPACPMDCIDFVEVGREWTREDARKAKLHHEEAWSRRVRQAALEDARLARRREAA SNIPAEAAAAAAAAAKKNFMADILAQARARSRQ >gi|319804905|gb|ADMF01000020.1| GENE 62 85008 - 85757 741 249 aa, chain - ## HITS:1 COG:PA4615 KEGG:ns NR:ns ## COG: PA4615 COG1018 # Protein_GI_number: 15599811 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 6 249 13 258 258 180 44.0 2e-45 MQTIKLLSRRKAAPTLFVLEFERPADYSFRAGQFARLGMELEPGAAPVIRGYSIASAPEA PTLEFFITAVKDGQLSPKITALEPGQSVLLDGPAEGSLTPDRIPGGSTLWLLATGSGLSP FASMLRSEAFWAAWKDVVLVLSVRQIEEAVLARELVAALPLERRPKLIVTTTRETDPARF GDLTGRIPTLIASGALEAAAERQITPEESRVLLCGNPDFIAAARAELKLRGLVSPRFGKP GQLVVENFW >gi|319804905|gb|ADMF01000020.1| GENE 63 85977 - 86309 423 110 aa, chain - ## HITS:1 COG:RSc1114 KEGG:ns NR:ns ## COG: RSc1114 COG1146 # Protein_GI_number: 17545833 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Ralstonia solanacearum # 1 107 1 108 108 129 67.0 2e-30 MPHVVCEACIGCKRTDCVDVCPVDCFREGPNFLVIDPDECIDCAVCIPECPEAAIYAEED VPEDQKEFIELNAELAREWPSITHRKPYADDADEWRGVPNKIKFLKKTWD >gi|319804905|gb|ADMF01000020.1| GENE 64 86608 - 87498 1035 296 aa, chain - ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 292 56 339 344 186 39.0 6e-47 MQLVEHEALDATVKGFIDELAARGFKDGENIRIDHQNAQGDQATLANIGTRFVSNKSQLI FASSTPAVQAMARATKTIPVVATAVTSFEAAKVVKSDAAPGGNVTGVSNLSPIAAQLDLL VEIAALTPNTAKTKPIGVVFNPSEVNAQFQVDRFKAAAEKLGIEVLTASASSVNDVPQAL NSLKGKICGFWFPTDNVIASAAATVAKVAAEAKLPVVASDSALVRAGSLASISVDYYELG RMTGAMGADILEDKKTPGEIPVGFQTAQKPFINLKVAQSIGLELPQALLERSNVQK >gi|319804905|gb|ADMF01000020.1| GENE 65 88056 - 88350 195 98 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRKAAVEPKWNFYLDTNKSTGIQYVQTSYNIWVPEKKQPRLGGKAYVGRLFPDGSVRPS KSFLERFPQYADKKLYYFENQLVDREGYLKLNPNAEAQ Prediction of potential genes in microbial genomes Time: Sun May 29 19:44:23 2011 Seq name: gi|319804896|gb|ADMF01000021.1| Sutterella wadsworthensis 3_1_45B cont1.21, whole genome shotgun sequence Length of sequence - 6306 bp Number of predicted genes - 5, with homology - 3 Number of transcription units - 5, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 87 - 368 427 ## + Term 476 - 515 3.1 + Prom 440 - 499 2.0 2 2 Tu 1 . + CDS 603 - 1721 1028 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Term 1792 - 1829 -0.4 - Term 1698 - 1742 1.2 3 3 Tu 1 . - CDS 1768 - 2583 883 ## CtCNB1_0918 hypothetical protein - Prom 2628 - 2687 2.4 - Term 2654 - 2695 3.1 4 4 Tu 1 . - CDS 2732 - 3163 554 ## - Prom 3251 - 3310 2.9 5 5 Tu 1 . + CDS 3392 - 6250 2746 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains Predicted protein(s) >gi|319804896|gb|ADMF01000021.1| GENE 1 87 - 368 427 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLATQTSYRGKLFVFTLATCLRTMMRVKAEAQAKEFDLKIPGNSLSQVFEILRGVTMQRW GSTDSWRINMLTRKQRECFALFGMTPIKGTRKD >gi|319804896|gb|ADMF01000021.1| GENE 2 603 - 1721 1028 372 aa, chain + ## HITS:1 COG:SMa2355 KEGG:ns NR:ns ## COG: SMa2355 COG0389 # Protein_GI_number: 16263727 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Sinorhizobium meliloti # 14 349 27 362 379 330 52.0 2e-90 MHTADPLFQNDLTRRIVHVDMDAFYASVEQRDRPELRGKPIAVGHADRRGVVATASYEAR PYGVHSAMPSSKAKMLCPHLIFVEGRMSRYREVSAEIRAIFHRYTDLVEPISIDEAYLDV TDNKLGIETGTEVARRIKADILRETSLTASAGVSYNKFLAKIASDWRKPDGLCTIHPDRA QSFIDALPIEAFWGVGPATAKRFRGIGVTNGWELRQLSFRRLTDQFGAAGSIFYKFARGI DLRPVRPFRERKSVGCEETFADDLKHPDRLAAALYEIAVELEKRRDKNGFIGRTLTLKIR FADFTTKTKSRTDLMPFVGAERLAAAGLELLRAIEVPAAGVRLLGLSVSGDGGSAAAARE ETLFAELEKNEA >gi|319804896|gb|ADMF01000021.1| GENE 3 1768 - 2583 883 271 aa, chain - ## HITS:1 COG:no KEGG:CtCNB1_0918 NR:ns ## KEGG: CtCNB1_0918 # Name: not_defined # Def: hypothetical protein # Organism: C.testosteroni # Pathway: not_defined # 8 269 28 291 293 71 30.0 3e-11 MSSAFSLGFSWFKDSCRTLKLQPLAYTGIVVFSLLMSGLLSSLPLIGTLLASLWMPFASV LTGFAARDVLAGRTPVYFTLIAIFRDKASRWPLLAVGILASIWMELDMLVFQMMGQADLA QWKITAEGVDVESIAAHFPVGAFLTAFALYLPLLLMTLFAPLLIVHNRQSVIKSLFYSFF GTLRSLVPCLVWLVCVAALAFVIFLTIESISIAAGGLMFFTFMAPILIALISAVCQAGIW VMFRDIFASSRPDGEMPTDLDSDQAPPANGI >gi|319804896|gb|ADMF01000021.1| GENE 4 2732 - 3163 554 143 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKLIIPGALALLLAGAAAAAPGLDAPPPYGGDAQAVQAEPPARKLPQKGAQEDMSIAPT QADMEKARRDREAGQIPPKNNDKRTKIEAVRDPNNHVTEYVVTPGSTKIPYRIENQADRP IDTTPGKNPSGTLGTPKFIEFGW >gi|319804896|gb|ADMF01000021.1| GENE 5 3392 - 6250 2746 952 aa, chain + ## HITS:1 COG:RSc2230_2 KEGG:ns NR:ns ## COG: RSc2230_2 COG0749 # Protein_GI_number: 17546949 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Ralstonia solanacearum # 352 952 31 651 651 538 49.0 1e-152 MSKLLLIDGSNYLFRAYHALPPLTTSRGEPSGAIKGFLGMLANVARLSKADRAAVIFDAP GKTFRHEMYPAYKANRPPMPEELRTQIEPLQGIVRALGWPLLIVPGIEADDVIGSLSAMA ARAGVDTVVATGDKDMAQLVDDHVVLLNTMNSKFYDREGVIEKYGVPPESMIAYLALMGD KVDNVPGIKSCGPKTAAKWINEIGGIDAIRAAAPTMKGKIGENLRAGLPFIDEAVALVTI KRDAVISGAETLADIKAVPAEESALEAFCARWEISRRTLDRAQALAAMGLAPAVTAEGAA ASNAAARSASLFGVPDAPVKSAAAKGDVPAAALLDRRSEKLEVPREGPAPEDLENPDETV CREVAGTEDLEALADRLQAAEGVDEPAAVTLLWDGVPRHADLGGLAFAFTPLDVWVVQPT IELSSAKIFEAVKPWFESNAPKLFHDAKAAIHVLAAQHIAVNGQIDDAMLMDYVLEAHLS HDLVRISARELRRRIPTRDEVSGKGAKRVGWRETPPEDAARFLAESAAALRAAGSVLKAR LLADEKLLRVYEDIERPLVGVLARMESAGITVDASLLAQESKELGVEVEQLVEEAHAAAG HPFNLSSPKQLAQILFAEQGLPVVKKTASGTPSTDEEVLSELALNYPLPKIILEHRRLTK LKSTYLDKLPTLIDRDGRIHTTFGQAVAVTGRLSSMDPNLQNIPTRTPEGRRIRTAFTAR RGWSVIDADYSQVELRIMAHLSQDAGLLSAFSRGEDIHRSTAAEVFHTPLDQVTPDQRRM AKVINFGLIYGMSAFGLAQQMGLDRQVAAAYVDEYFHKFPGVKRYMEKTRAQAAEDGYVE TAFGRRLWVPDITAPRPMVRAAAERAAINAPMQGTAADIIKRAMIAVDAWLRTEKLQAKL LLQVHDELIVEAPAEEVELVKQKLPELMAGAAKLSVPLIADVGVGASWNDAH Prediction of potential genes in microbial genomes Time: Sun May 29 19:45:02 2011 Seq name: gi|319804830|gb|ADMF01000022.1| Sutterella wadsworthensis 3_1_45B cont1.22, whole genome shotgun sequence Length of sequence - 77109 bp Number of predicted genes - 62, with homology - 50 Number of transcription units - 41, operones - 14 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 29 - 487 436 ## gi|302859242|gb|EFL82324.1| glycoprotein/polysaccharide metabolism - Term 631 - 674 8.1 2 2 Tu 1 . - CDS 733 - 1965 1653 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 2152 - 2211 3.8 + Prom 2779 - 2838 4.0 3 3 Op 1 . + CDS 2928 - 3233 339 ## 4 3 Op 2 13/0.000 + CDS 3287 - 4228 1112 ## COG0142 Geranylgeranyl pyrophosphate synthase 5 3 Op 3 . + CDS 4337 - 6205 1792 ## COG1154 Deoxyxylulose-5-phosphate synthase + Term 6340 - 6369 1.9 + Prom 6321 - 6380 1.6 6 4 Op 1 . + CDS 6425 - 7459 921 ## COG0812 UDP-N-acetylmuramate dehydrogenase + Term 7500 - 7530 -0.9 7 4 Op 2 . + CDS 7631 - 8326 976 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 8382 - 8427 13.5 - Term 8368 - 8416 8.1 8 5 Tu 1 . - CDS 8475 - 9983 2073 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 10111 - 10170 4.8 - Term 10315 - 10360 11.5 9 6 Tu 1 . - CDS 10428 - 10691 277 ## PROTEIN SUPPORTED gi|163856989|ref|YP_001631287.1| 30S ribosomal protein S20 - Prom 10872 - 10931 4.2 + Prom 10649 - 10708 2.7 10 7 Tu 1 . + CDS 10949 - 12496 877 ## PROTEIN SUPPORTED gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 + Term 12606 - 12638 -0.1 11 8 Tu 1 . - CDS 12608 - 12922 407 ## 12 9 Tu 1 . + CDS 13252 - 14472 1470 ## + Term 14500 - 14546 5.5 - Term 14488 - 14534 4.5 13 10 Op 1 . - CDS 14597 - 16537 2107 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 14 10 Op 2 . - CDS 16613 - 17545 812 ## PROTEIN SUPPORTED gi|186476110|ref|YP_001857580.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific - Prom 17652 - 17711 5.3 + Prom 17902 - 17961 2.1 15 11 Tu 1 . + CDS 18012 - 21584 3434 ## COG1196 Chromosome segregation ATPases + Prom 21590 - 21649 1.8 16 12 Op 1 8/0.000 + CDS 21718 - 23685 1550 ## COG0642 Signal transduction histidine kinase 17 12 Op 2 . + CDS 23692 - 24363 643 ## COG4566 Response regulator + Term 24422 - 24451 -0.3 - Term 24299 - 24342 5.9 18 13 Op 1 . - CDS 24354 - 24893 649 ## COG0242 N-formylmethionyl-tRNA deformylase 19 13 Op 2 . - CDS 24923 - 25675 782 ## COG0005 Purine nucleoside phosphorylase 20 13 Op 3 . - CDS 25678 - 27912 2081 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Term 27964 - 28021 9.9 21 14 Tu 1 . - CDS 28051 - 29280 1222 ## - Prom 29319 - 29378 4.8 22 15 Tu 1 . + CDS 29602 - 32007 3252 ## COG1048 Aconitase A + Term 32061 - 32117 6.1 23 16 Op 1 . + CDS 32340 - 33818 2170 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 24 16 Op 2 . + CDS 33840 - 34187 518 ## Sfum_1444 fumarate reductase flavoprotein subunit precursor + Term 34237 - 34288 2.2 - Term 34290 - 34327 7.4 25 17 Op 1 . - CDS 34353 - 35057 850 ## COG2186 Transcriptional regulators - Prom 35077 - 35136 2.0 26 17 Op 2 . - CDS 35152 - 37848 2765 ## COG0249 Mismatch repair ATPase (MutS family) - Prom 37937 - 37996 2.1 - Term 37940 - 37972 -0.3 27 18 Tu 1 . - CDS 38010 - 38900 1108 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 39000 - 39059 5.8 28 19 Op 1 . - CDS 39631 - 41166 75 ## CHAB381_0630 hypothetical protein 29 19 Op 2 . - CDS 41191 - 41583 178 ## - Term 41604 - 41653 12.1 30 20 Tu 1 . - CDS 41826 - 46727 5409 ## Ent638_0501 outer membrane autotransporter - Prom 46885 - 46944 3.1 + Prom 47286 - 47345 2.4 31 21 Op 1 15/0.000 + CDS 47410 - 47955 486 ## COG2825 Outer membrane protein 32 21 Op 2 18/0.000 + CDS 48090 - 49193 1154 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase + Term 49223 - 49278 8.2 33 21 Op 3 . + CDS 49357 - 49788 548 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases + Term 49851 - 49902 11.0 - Term 49430 - 49476 5.0 34 22 Tu 1 . - CDS 49667 - 49993 91 ## + Prom 49910 - 49969 4.1 35 23 Op 1 11/0.000 + CDS 50092 - 50880 1070 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 36 23 Op 2 11/0.000 + CDS 50918 - 52096 1235 ## COG0763 Lipid A disaccharide synthetase + Term 52137 - 52182 6.4 37 23 Op 3 1/0.222 + CDS 52206 - 52943 661 ## COG0164 Ribonuclease HII 38 23 Op 4 . + CDS 52940 - 53764 627 ## COG0566 rRNA methylases + Prom 53799 - 53858 3.4 39 24 Op 1 . + CDS 53948 - 55114 1217 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 40 24 Op 2 . + CDS 55145 - 55456 260 ## + Term 55474 - 55520 12.4 - Term 55461 - 55508 11.3 41 25 Tu 1 . - CDS 55554 - 55988 485 ## gi|237745902|ref|ZP_04576382.1| predicted protein - Prom 56032 - 56091 2.9 42 26 Op 1 1/0.222 + CDS 56184 - 57170 744 ## COG0590 Cytosine/adenosine deaminases + Term 57174 - 57210 -0.9 43 26 Op 2 1/0.222 + CDS 57230 - 58261 1081 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 44 26 Op 3 . + CDS 58258 - 60327 1512 ## COG0642 Signal transduction histidine kinase + Term 60399 - 60445 1.4 45 27 Tu 1 . - CDS 60373 - 60909 543 ## COG1959 Predicted transcriptional regulator - Term 60927 - 60974 11.2 46 28 Tu 1 . - CDS 61028 - 62245 1689 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Prom 62193 - 62252 2.3 47 29 Tu 1 . + CDS 62330 - 62527 123 ## + Prom 62872 - 62931 2.0 48 30 Tu 1 . + CDS 63015 - 63503 340 ## - Term 63540 - 63582 11.0 49 31 Tu 1 . - CDS 63672 - 65315 2255 ## COG2759 Formyltetrahydrofolate synthetase 50 32 Tu 1 . + CDS 65344 - 65595 94 ## + Term 65657 - 65718 7.1 - Term 65549 - 65589 3.0 51 33 Tu 1 . - CDS 65610 - 66233 765 ## COG4566 Response regulator - Prom 66306 - 66365 3.8 + Prom 66328 - 66387 1.6 52 34 Op 1 . + CDS 66413 - 66952 448 ## COG3467 Predicted flavin-nucleotide-binding protein 53 34 Op 2 . + CDS 67003 - 67494 669 ## + Prom 67560 - 67619 2.4 54 35 Tu 1 . + CDS 67835 - 69529 1408 ## COG0422 Thiamine biosynthesis protein ThiC + Term 69649 - 69688 2.1 - Term 69561 - 69599 4.2 55 36 Op 1 5/0.000 - CDS 69672 - 70139 412 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 56 36 Op 2 42/0.000 - CDS 70186 - 71055 721 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 57 36 Op 3 . - CDS 71048 - 71737 602 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component - Prom 71826 - 71885 4.7 + Prom 71555 - 71614 1.7 58 37 Tu 1 . + CDS 71850 - 72779 1034 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 72829 - 72869 1.1 + Prom 72830 - 72889 1.7 59 38 Tu 1 . + CDS 72970 - 73806 1219 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 73820 - 73852 4.0 - Term 73923 - 73961 -0.8 60 39 Tu 1 . - CDS 73987 - 74847 974 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 75063 - 75122 2.4 + Prom 75131 - 75190 3.0 61 40 Tu 1 . + CDS 75224 - 76597 870 ## + Prom 76699 - 76758 8.2 62 41 Tu 1 . + CDS 76782 - 77109 190 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein Predicted protein(s) >gi|319804830|gb|ADMF01000022.1| GENE 1 29 - 487 436 152 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859242|gb|EFL82324.1| ## NR: gi|302859242|gb|EFL82324.1| glycoprotein/polysaccharide metabolism [Burkholderiales bacterium 1_1_47] # 18 152 7 138 138 74 34.0 3e-12 MLKKMLPALCCAALAAGCASTATTGSSAEPLSGEKPAQLADRSFMWVDGASEDCELPPSI RFGADGRISGQAGCNRMLGSWKQDGKTIDLGQIATTMRLCGPAFMEVEKKFLSLLGAAKY ITAAADGEGIVLWNDKGEKLVELLPERAGKCD >gi|319804830|gb|ADMF01000022.1| GENE 2 733 - 1965 1653 410 aa, chain - ## HITS:1 COG:DR0656 KEGG:ns NR:ns ## COG: DR0656 COG1301 # Protein_GI_number: 15805683 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Deinococcus radiodurans # 8 401 5 406 431 275 42.0 9e-74 MASKPKISLAWQMMIGLALGVVVGAFVDSAFAQTYLQPLGQLFIRLIRMVVVPLVIATII AGCAGIADTSKLGRVAGKVLLVYAITTALSVLFGILFANWIRPGIGLDLSTDSLVAKAVT APSLTTTLLEIVPINPMEAMSKGSMLQIIFFAVIFGFGLSALGERGKPVLTFFELVGDVM IRVTNMVMLYAPIGVFGLIAFTVARHGLSVLLPLFSLVLTSFLATFCLVFIVLVPMVALL GRTPPVKFLKGIFEPWLIAFTTCSSAAALPANLKAARKLGASKSIASFSIPLGNTVNMNG TAVYMGVCAVFAAEVFGIPLSITDQATIVLMGVFAAVGTAGVPGAGLIMTTIVFTQVGIP LEAVALIAGIDRILDMIRTSINVVGDVASALVVTNLEGDLNKEPYQEGEA >gi|319804830|gb|ADMF01000022.1| GENE 3 2928 - 3233 339 101 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSNAAAPEDVEKLSFEDALDELERITAEMASGNATLDQSVKSYERGAQLLKRCRAELNRA RQSIERIRVEDGEVKRQTSDASPSEASIPSADTLNENDLPF >gi|319804830|gb|ADMF01000022.1| GENE 4 3287 - 4228 1112 313 aa, chain + ## HITS:1 COG:NMB0261 KEGG:ns NR:ns ## COG: NMB0261 COG0142 # Protein_GI_number: 15676185 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Neisseria meningitidis MC58 # 47 313 1 259 259 225 52.0 7e-59 MSTIPTTSAAELEFQRWMKERVSHFEWFAEKMLPQTGIGAKRLVGAMRYSLLGGGKRIRP LLCYAAGAVSGAPEEVLDRAALALEMIHSYSLVHDDMPSMDNDTLRRGRATTHVRYGEAM AMLAGDALQTEAFTVLSSPSVPPEAAQRLVQTLARAAGVWGMCGGQALDLEMVGQKPGAA ELSRMQAMKTGAMIMAAVLMGAQSGIWTALGDQAKAGLAAYADALGVAFQVVDDILDCTQ DTMTLGKTAGKDAKDDKPTWVSLLGLDGAKARAKALEEDAEKALQLLAADPAVPAGAEAR LREIALYVVRRTH >gi|319804830|gb|ADMF01000022.1| GENE 5 4337 - 6205 1792 622 aa, chain + ## HITS:1 COG:RSc2221 KEGG:ns NR:ns ## COG: RSc2221 COG1154 # Protein_GI_number: 17546940 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Ralstonia solanacearum # 1 619 1 625 636 698 57.0 0 MDYPVLDKISAPEDLRKLPESSLPELARELRHFIVDSVSKTGGHLSSSLGAVELAIALHY VFNTPYDRIVWDVGHQAYAHKILTGRRAGMAKLRQLGGISGFPKRSESEYDAFGTAHSST SISAALGMAVAAHLAGERDRWAIAVIGDGALTGGMAIEALNDAGVWKKGVKLLVIVNDND CSISPPAGALSKNLAKIVSTRAFNCAREISKRVLKPVPHLWEVAKLMERQTIGFFSPQAA LFSTFDLNYYGPVDGHDIFALVEVLKNLRQMDCPMVLHTATIKGKGYAFAEADPTLYHGV SPFNPKVGIVKSGKPSAPTYTQIFSRWVNSMAARDHRLYAITPAMREGSGLVEFEKNFPD RYRDVAIAEQHAVTYAAGLACGGLKPVVAIYSTFLQRALDQLIHDVALQNLPVMFAVDRG GIVGADGATHQGVFDIAELRSVPNMTVMTPSNERETRLLLNTAFAMDTPAAVRYPRGKGP GTDPGEDFETVEIGRALKRRTGTRTAFLGFGSMTNVLEKAAQNLDGTLWDMRFVKPIDRE AVIEAARTHDLIVTAEEGVLAGGAGDAVMEVIAEAGLTTPVLCFGIPDEFIEQGTQAEIY EMLGLTPEAVEAKVVERLAQLS >gi|319804830|gb|ADMF01000022.1| GENE 6 6425 - 7459 921 344 aa, chain + ## HITS:1 COG:HI0268 KEGG:ns NR:ns ## COG: HI0268 COG0812 # Protein_GI_number: 16272226 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Haemophilus influenzae # 10 339 4 328 341 239 40.0 5e-63 MLKIEYDKPLAALTTFHLRANAEAWVEVASLEDIRDALSVAKGRDWQTTILGGGSNVVPM PLVPGLVIHPVFRGIHEAQSESGSLVVVVGAAEALDDLVRYTVGKGLGGLENLAAIPGSV GGAVVQNAGAYGVEMAERIAWVRVYDPDIDDFRTLTPTECDFGYRTSIFKSKAGSRLIIT EAAFVLPQVWQPVTAYKGLSSLFADRDPASVTPAEIETAVRNLRAQKLPDPSQTGSAGSF FKNPVVTKLKARELITLHPNLVSYPLAGGRAKLAAGWLIEAAGLKGLSSGDAAVWPAHAL ILINRGRATGEDVLKLGREIAERVERRFGVVLEPEPIFLGKDFR >gi|319804830|gb|ADMF01000022.1| GENE 7 7631 - 8326 976 231 aa, chain + ## HITS:1 COG:STM3049 KEGG:ns NR:ns ## COG: STM3049 COG1272 # Protein_GI_number: 16766350 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Salmonella typhimurium LT2 # 19 224 11 216 219 174 49.0 1e-43 MQEKKKVSSSSAVNAVGTYSLGEEIANAVTHGLAVLLSIAGLVLMIIFAVRQSAGALAIV STSIFGASMIILYTVSTLYHAIPNLRAKRVLQVLDHSAIYILIAGSYTPFCLITLGGTTG IVLCSVVWTIALFGACFQPLLLRAADWLNCVLYLALGWCIVFVAEPLIESLPTGGLWLLA AGGITYSLGIIFYLWEKLPYNHAVWHVFVLAGTMLQFFAVLFYVIPHGTAA >gi|319804830|gb|ADMF01000022.1| GENE 8 8475 - 9983 2073 502 aa, chain - ## HITS:1 COG:lin0374 KEGG:ns NR:ns ## COG: lin0374 COG1053 # Protein_GI_number: 16799451 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Listeria innocua # 26 497 46 506 506 170 32.0 5e-42 MNSLNRRDALKSGLFGAAAAAGTMLGAGAAEAKPASQAKDYKFDFVVVGAGCAGLSAALE AADQGATVAVLEKMGMPFGNTIYAGGIFNATNTYVQKEQGLTDTVDAFYEDMMKVSQGRG DPQLTRVYADESAGAVQWLHDRVGINFKKIVKEVWPGLVRGHVVDGPKKPGGAQLITQLL EQVKKNPKIKFFTNTKVIELLKTPTLECTGVRAVSKTEGEVVFHAKGGVLMATGGFHANK EMVCKYMGGGVAWMPLRGSPYLMGENVELTRPFFPYYMNMDQFHGGPIHAQTQANPSTLV NYGVIVGTNGDRIINEAKTYVEMAKELPVITRNNLAYIVIDSAVLENDTVATRLDRYRAK KAPVYQADTYAELAKQMGVDPEVFTKTMEGYNEAVKSGKAAALTPGNTLKEPRLVVKAPF LALPFSGGMTATFGGPKINAKGQVLNAEQQPVPGLYAAGNAIGGLFYWNYIVGSQLTAAV IFGRHAAQDAAARAKAKGAKKA >gi|319804830|gb|ADMF01000022.1| GENE 9 10428 - 10691 277 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163856989|ref|YP_001631287.1| 30S ribosomal protein S20 [Bordetella petrii DSM 12804] # 1 87 1 87 87 111 66 1e-23 MANTKQARKRARQTVARNLHLAAQRSQYRTAIKKVRKLVAAGDKAAAQEAFKAAESTIDK MARKGVLHGNAAARHKSRLAAEIKALA >gi|319804830|gb|ADMF01000022.1| GENE 10 10949 - 12496 877 515 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 [Vibrio campbellii AND4] # 1 511 1 516 520 342 35 4e-93 LSMSLFKSAATISALTLASRITGVIRDMLIARYFGATAATDAFYVAFRLPNMLRRLFAEG AFQQAFVPMLSDVHANSSPEAEKRFIDHVFTVLAAAVLLASVLGVLAAPLLVWLIASGLR ETPEAFDLAAALTRVMFPYIAFMSLVALAASILNTLKKFAIPAATPILLNLSFIVCSVVL APRLEEPIWALAAAVVLGGVLQLAAQILALARLGVFVRPRSLKESLGDSAVRRVLALMAP AVFGVGVAQLSILINTNIASWLGHGAVTWLNYADRLMEFPTALLGVALGTVLLPSLSAAY AKGNEVRYNALLDHGLRLVVLVGVPAAVGLWLTAELLVSFLFQGRSFTPTDVHQTAIAVV GYAVGLIGLIGLKIIAPAFYARKDIRTPVRAAMASLVAVQAINLVVVPLFAHAGLALSVG LGSLVNSGILLCVLRRRGIYSPAAGWLKIWLRTAAAVALMGAAVWWGQQGIDWTALTWKV RGLGVCAVVAGAAVIYFGSLFALGWRPRELRPVKE >gi|319804830|gb|ADMF01000022.1| GENE 11 12608 - 12922 407 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEVSAPWLHATLADAAESLAAALEKLEAHTDEETASELLRRDLVEVYAKLNYAVNTAYL GSEALNVLTEDELVAWPAEMPFATLEELDAAEEEEEQKALNADV >gi|319804830|gb|ADMF01000022.1| GENE 12 13252 - 14472 1470 406 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPQSKTHSSRAKKLAKRRADQQRRAVPQTYVVMLDQLRAVLNKRFYEEQGFPHLEILAER YKGPVTTGHLSNYFELQHFFIGMGAAMANALSAERKFSMEQREDHCAAVAYAIAATILDL REDFRDVSGWAGPRALEILRSRWGQSKMAYAGITDTAKFMDDRSMACYFGMDFVMTFLDL TGELAQFGSENVFSVTTCKDEVISAFTSYLTSDPALGGSRLVDLQEIIEDNTVTAEFKSD YPNWRPESADAFNTMLVGYNALSPADTAYLEELVADPHFKHDMRALYVRAEPSDSEQGMR EEIVMGYALRYGPRSKAAFAAGRDPTEEEMDQDAEVINLLVMTTFTYADPAFVPGVDDDP AGSEARGDDEGDSHVYRMTAAPQVEDVFKSWKAGVLTAGKPKDTAE >gi|319804830|gb|ADMF01000022.1| GENE 13 14597 - 16537 2107 646 aa, chain - ## HITS:1 COG:RSc1376 KEGG:ns NR:ns ## COG: RSc1376 COG0488 # Protein_GI_number: 17546095 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Ralstonia solanacearum # 1 641 34 676 676 555 48.0 1e-157 MLRLLNLALMRGTRLLYAHANLIASPGERIGLVGPNGCGKSTLFAAILGDLAPEDGELET PPHERIAHVAQSFTVEDISCIDCVLSGHAPLMNAKAALKRAEASGDEMALAAAHSELAEV NEGAVVAQAKAILAGLGFAEADSCRKVHDFSGGWRNRIQLARALMRPADLLLLDEPTNHL DIDSLIWLENWLRRVEATVIIISHDREFLDRAVNTIWSVEDGTICRYAGNYSQFELARIE KLRAQESARRAYETQAAHLTSFIERFRAKATKARQAQSRIKMLEKLQAVEPVRAKREWRF NFLKPLRLPEHLVDGENLKIGYGDKVVLSGVSFSIRSGERIGILGVNGAGKSTLVKAIVG ELTPMSGELRRGQGLEIGYFAQHQLDQLRMDETPLEHLRHLAPDAREQELRDFLGTYRFS GDFAEAKVAPMSGGEKARLALALIAWKKPNLLVLDEPTNHLDMETREALTMALSTYEGAV LLVSHDRHLLRAVTDELWLVHEGRKEVFEGDLDDYAKIVLDHRRVTAAEARAEHQADKAA RNEAQPVNNKEARRLAAQERARIAELRKPLKKELEKVEREMNALSEKLKALDTQLADPAF YNGADQGKVAQTLREHGELAPKVEALEMHWLELSEKIEALGTAASA >gi|319804830|gb|ADMF01000022.1| GENE 14 16613 - 17545 812 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|186476110|ref|YP_001857580.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Burkholderia phymatum STM815] # 13 302 3 292 295 317 51 1e-85 MYEIAPLLDDPIHNLKTIRDLYRWAVTELETSDLSFGHGAPSALEDASFLICRALKLPFE NFDMFLDAALTHNELVRIVHLIDRRVHDKTPTAYLLKEAWLTEHRFYIDERALIPRSYIA ELLEEDLAPWAADPEAVQSVLDLCTGSGCLAILAQGAFPNAKVTGSDISQAALEVAKINR RDYDMEETLELVQSDLFENLQGRRFDIIISNPPYVTTDAMERLPSEYRHEPALALAAGAD GMDVVRRILAEAADHLTEEGFIVVEVGDGLEAVEAAFPGLPITWLSVSGGDDQVFLAQRA DLAQYFKIQH >gi|319804830|gb|ADMF01000022.1| GENE 15 18012 - 21584 3434 1190 aa, chain + ## HITS:1 COG:NMB0545 KEGG:ns NR:ns ## COG: NMB0545 COG1196 # Protein_GI_number: 15676451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Neisseria meningitidis MC58 # 1 1175 1 1159 1161 473 33.0 1e-133 MHLRQIKIAGFKSFADPVVIELRDPLIAIVGPNGCGKSNIIDAVRWVLGEGRIGELRGSS SMSELIFAGSTGRAPLGRASVELVLDNADHQVKGPWGQYEELSVRRVVTKEGVSAYYINH QQVRRRDVQEIFMGTGLGARSYAIISQGMIASFIRAKPEELRVYLEEAAGVSLYKERRRE TENLLKSTRENLERAADLQAVRAEEITRLQAEADTAARWQALSDKKVQSESLWYFLQYED AKRESDAARAAIAQLENEITAKRRDLETLESHSEDLAAAERSADAAHRNASDAFRESEKE LARLEGEMSRIVERRRLAERTFAEAEAALKEKRALAEELEVRIESAAQKEERLAAELEEL DELNAARDEALEGAQSAEEESRMRAESAGAQLARARTEVEVAEAGLQSARERAAEVADRM ARLETDAADTSEAHPDEETLAELAESLAEVREELEETAAAREDAAAAAEETRERAKDAAE AYFAALSQVKALRAKLETLEAVQQKALESDSFTEWLQDQGLDGLPELIHEINIDDVWTTA LEAVLEHRARAFLLRDLRSAAGFASAKARPPARLAFAAPAETAAHPYPEWAAKRLRSVIQ TDNPAAAAAADVWTAGVGLASSLETALAARADIPPGCALVTPQGDLVNAASVTFWAAEDP RLAILSREREIAELTHQVEALDEAAAAADDARTAAQKAEADARGRAEVLQREVVELERRT AKLVLEEREARSAWEVWQRREADLRRSREEMEIEAERAQERVEAALGAVETKTEALDEIQ HAAGEAAAAHDRLHDRLIDLKRAAAESIHREAMKKLEASQARESRTEAERRLAETQSDIA RESKRLEETREVLDAREDERLQSGTSELLEKNASLEKALAAAQTELEAARSKREDEQRQI KRLNESILPLTEEIARLRVEAEQKAGLLGQFSGRMQELGADWTELSKLAQERGVKANTVR NEVTRLMNEIAALGPVNHAALAHLEAAQEAIRLAEAQMQDLRQAIETLEAAIRRIDAETR ARMRETFDKVNEKFNDTFRGLFGGGRAALRMEGDEILSAGVEVSAQPPGKRNQTVRLLSG GEQALTATALVFAMFKLNPAPFCLLDEVDAPLDEANQGRLARLCTEMSVDTQFLIITHHR VTMEYAKALIGVTMKEPGVSRVVSVDIAEAVGYAQQANESEPAGSAGALS >gi|319804830|gb|ADMF01000022.1| GENE 16 21718 - 23685 1550 655 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 102 609 66 558 592 107 24.0 6e-23 MNPRLFSLQPGADAIKKLGALLVLGACGLFCPLSGSAAAAPSQPDALTAASFSSDFPTEH MPLKVGVVKYVRPSPYEPIVEATIGALKRVFGTANVIVTHYDLAGLSQAIREGEVDLFLS SSGFYVRMERYGARAAATVASNSYPNPNHNDGSTIVVSAARKSLNKLSDLKGAKLVLSSP QAFTGRQLAEHVLLKAGLNPETLFSSRVYLGDGKRLEGAIPMILSGEADVGIFRLCYLED WLASHPNAKGQLKVLNRLDSAERPEPCMRSTALYPSWTVATTPATNPRVSRLVLRTLFEM PPTFERGLYWSAATDYSSVDQVFHDLRIGPYAYLRDWTVRRLIDEYGTWILVFALLLLGL IFHSVRVSQLVRVRTAHLQEALHEQKRLQSNARAAAERVEHMSRVGAVGQLSTIFAHEMR QPLAAISLYVFGLKRLVQSGSLTPEKIEAIAGKLETQTARADAIVNRVRAYAKSDKPVRE AVSLVEAARKALRELTTTGRWHAAVSIAAREDVQCLADPLELELVAMNLIKNALEAVEGF PAGMVNIAVSEHNGKAELTVLNNGPAVPSELVDRLNDRAASGSSSKKSGLGLGLSIVRSI LERLGGRITFTALAGGGLAAVATLPTLARALSLHQAAEGPADAPEAKEIGNSSKN >gi|319804830|gb|ADMF01000022.1| GENE 17 23692 - 24363 643 223 aa, chain + ## HITS:1 COG:mll0990 KEGG:ns NR:ns ## COG: mll0990 COG4566 # Protein_GI_number: 13471106 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 24 203 16 196 212 133 37.0 3e-31 MRPSQKQITPEQLAFAQAHALVRIVDDEADLREALSFVLDMEGWKTVTYGRAEDFFTGDS PSEPGCVVLDVRMPGMSGIEAQHEMRSRGIALPIIFLTGHGDVDMAVGAVQDGAFDFLLK PVDNERFLNSVACAAWASAAAAAGLPGEDSLERLAALTKRERSLAELIALGLTNREAAER SGIAQRTMEVHRANILRKLGVKTPEDIRRLLEMAAAEKSVVHR >gi|319804830|gb|ADMF01000022.1| GENE 18 24354 - 24893 649 179 aa, chain - ## HITS:1 COG:RSc1399 KEGG:ns NR:ns ## COG: RSc1399 COG0242 # Protein_GI_number: 17546118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Ralstonia solanacearum # 1 175 1 171 177 216 57.0 1e-56 MVLEVMRLGEPVLMKEALPVRDFGSPRLRKLVADMWDTMHAEGGVGIAAPQVGVSERIIC FGFEASSRYPDAPAVPQTVLINPTVELLLEGTADDWEDGWEGCLSVPGMRGVVPRARRIR YTGFGLDGETIEREAEEFHARVVQHEFDHLKGIVYPMRIKDWTHFGYSDVLFPELKDQR >gi|319804830|gb|ADMF01000022.1| GENE 19 24923 - 25675 782 250 aa, chain - ## HITS:1 COG:PA3004 KEGG:ns NR:ns ## COG: PA3004 COG0005 # Protein_GI_number: 15598200 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Pseudomonas aeruginosa # 3 211 5 213 245 218 55.0 1e-56 MLALIGGTGFDRPGIIEDPEEIDMETPYGRPSAPLIFGRLGSRPIVFLRRHGVHHEYAPH RVPYRANIWALQRAGVEGIIGVATVGGIGEALLPGDLMVPDQLIDYTWGRECTYYDSPDA GVKHIDFTMPFDQALSALLISAARRLGKTIVADGVYACTQGPRLETAAEVARYARDGANV IGMTAYPECALARELELPYAAICPIVNSAAGLRESKRAIRFEALKDAADRAAKGAVDVVE EAVRILDVRA >gi|319804830|gb|ADMF01000022.1| GENE 20 25678 - 27912 2081 744 aa, chain - ## HITS:1 COG:ECs3283 KEGG:ns NR:ns ## COG: ECs3283 COG0272 # Protein_GI_number: 15832537 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli O157:H7 # 59 732 7 669 671 624 51.0 1e-178 MTSLFNDNEEAAPVKAKPQRTRKTGKAAAAPASGAASPAQASFFGGDAAALSPDQAPARM HQLETELERWNYEYYVLDEPSVPDAEYDRAFNELKALEARFPELKSRTSPTLRVGGAVRT GFKKVRHDVPMLSIHTETDFSAAGAAAFDERVRSALGLSPEDPPVEYDCELKFDGLATNL RYEKGVLTEASTRGDGVEGEDVTANVRTIRTIPLRLNGKVPDILEVRGECIMHKADFLAL NARQEAAGEKPFANPRNAAAGSLRQLDSSVTAQRTLHFYGYSLGEVSEPFAETQSGVLDR FAELGFPVAHMREVVKGPEALAAFHDKVAAARASLPFEIDGVVYKVNSLELEEELGFIAR EPRWACAHKYPPEEVLTQVLGIDVQVGRTGRLTPVARLAPVYVGGVTVSNATLHNEDHVV KDLDLRVGDTVVLRRAGDVIPEILRVVKERRPAGTKVFEMPHVCPICGSAVIRDEEEKDM RCTGGLVCPAQMKLSIVHFAARRAMGIDGLGEKIVDMLVDEGLVKTPADLFGLTLEALTA PTTATAGSEKPEKRMGPKAAANLLASIQASTHTTLARFVFALGCRHVGEATALGLANHFG TLSAIENASMEALTGVPDVGEVVAESIYAFFREPHNRTVIDALIARGIRWPAVEKTAPSL VSGKTFVLTGTLPTLSRDEAKDRLTAQGAKVAGSVSRRTWCVVAGADAGSKLSKAEELGI PVIDEAKLLMLLDGTLPAELEKKD >gi|319804830|gb|ADMF01000022.1| GENE 21 28051 - 29280 1222 409 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSLEIIIPIIVVAAVCAVYIILRGRRDERRAREAGEKLRPIPMDDPLVAGGAAMRPAPD APAPKPAASAAAPMEPVFNPDAAKPSEESELFEPQSPSDEPPIYRQLEAEEEAQRAADEA EAQAAAQAAEPESSERHPAEPPVDSMIEWILDIAPREGMQFALGGVQSLKLEVDRLQLPL LVRIWAQSSRDGLYYDSGELTGPARHVVAAVVLANRAAQLDDVAASRFFQVLEQSAAQNE VALRREMEPEDAVKRSADLKRFIKYYDRAVEVRIVPRGEAEENFSLEAVGAAASAAGFAA ASGRWELRLAVDDIDPVMTLAFGPDQTKSLTLALSLPLANLARGDLKRFFAIANSLAAAL NGIWTDCAARPIDAGGAMQIAEKIASQAKLMSAGGVTPASERAKLLFSH >gi|319804830|gb|ADMF01000022.1| GENE 22 29602 - 32007 3252 801 aa, chain + ## HITS:1 COG:SPAC24C9.06c KEGG:ns NR:ns ## COG: SPAC24C9.06c COG1048 # Protein_GI_number: 19114943 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Schizosaccharomyces pombe # 52 792 41 776 778 781 52.0 0 MKTPALSRRSLLKTAAAAGAAASVPTLASSASLKPAAETGHIRNFDMIEAFYREYPKKLA AVRGHLGRPLTLAEKILYTHLYHPEEMREFKRGADYVELRPDRAGTHDIGGPMAIIQFLS SGKDRIALPAAIVCDHLVMANAGAIPDLKVADKSNYETYDFLARAAKRYGFDFWPAGAGI CHQVFLENYNFPGGMMLVTDSHTPTAGGLGMLAIGVGGADLVDGLMGMEWELKMPKLIGV KLTGRLQGWASPKDVILKLTGILSTKGGTNAIIEFFGEGTESLSATGKATICNMGAETGA TTSIFPFDAAMERYLVSTGRQAVVDLARGVAKDLKADPEVAADPAKYYDRVVEIDLSTLE PHINGPFSPDAAMPISTVAAKAKEKGFPQKLEVALIGSCTNSSYEDITRAASVAKEMIDK GIEVKTPIMVVPGSVRIFQTLERDGLLDVFRKLNATVLATACGPCIGQWHRTTGDMTRPN SIIESFNRNFAGRNDGSTKTNAFLASPEIVMAMAAEGDITFNPLAGTLRSRTGQNVKLAE PKGEELPKQGFVKEVAGCVLPTYEKIDMAVSPTNERIQLLSPFKPWDGKDFVALPLLIKV KGKCTTDHISPGGKWLPYRGNIDRISDNLLERGINAFNGQAGKVWNTETKAYDTPAKVAR YYKNHHVASVIVGDDNYGEGSSREHAAMEPRYLDVAVVLAKSLARIHESNLKKQGILALT FSDPADYDKIREKDRISVLGLSEIAPNKTVVIELTHEDGSKERFEARHSYNAKQLAWWRA GSALNWVVAQEKAEQSGARKA >gi|319804830|gb|ADMF01000022.1| GENE 23 32340 - 33818 2170 492 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 20 490 18 481 484 160 28.0 4e-39 MSDMDMSRRGLLKTSLFGAAAAGMTGIAAAAEAKSSKKAPVYDAIVVGAGPAGLIAAITA HDLGAKVVLFEKRDRPDGNAIYALGSVCGWGSRHQKEQGIEDTAEAFYAMMMDVSKQMGD KALNRTYTDNISEGIDWLEKEGVKFGKIKPMPYPRLGRTCRVLGEGLTGGSRLVQTLLAA AKKRGIEILYEHKVIELLHDDHFSVTGVKTLSDEGQKEWLSKGGVCLTTGGFSANPEMVD RYIGGWATRMVLRGSRSTTGENISLALPLYAKFVNMDQFHCGPIVGITHVNPADVLNSGY GVQVNTSGKRFMDENNTYVVKARTTALQTLDNQAWVIVDSECPVLDKVIAKFDRLHSPYG KADTIEELCKQVNLPEKNVVKEVKAYNDALAAGKLEEMVPPCTYKKPHPVAKAPFYAVPF QGGMTATFGGPLINTKAEIQSLDGGSIPGLYAAGNAAGGIFFFNYAGGAQLGAATVYGRI AGRELANRAKQN >gi|319804830|gb|ADMF01000022.1| GENE 24 33840 - 34187 518 115 aa, chain + ## HITS:1 COG:no KEGG:Sfum_1444 NR:ns ## KEGG: Sfum_1444 # Name: not_defined # Def: fumarate reductase flavoprotein subunit precursor # Organism: S.fumaroxidans # Pathway: not_defined # 16 114 15 114 114 82 45.0 4e-15 MTKTKFLGLAMALCFGAAFSTASIAGDFTADFHLAHGQKCETCHKTAPKAGAKVKKQVCQ GCHSYEQLAKQTAKVEPNPHYSHLGDVNCTDCHKGHKKSELMCNSCHQFDLKVPH >gi|319804830|gb|ADMF01000022.1| GENE 25 34353 - 35057 850 234 aa, chain - ## HITS:1 COG:AGl3126 KEGG:ns NR:ns ## COG: AGl3126 COG2186 # Protein_GI_number: 15891681 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 36 225 30 219 238 76 31.0 5e-14 MGATALESNYLSDRPVDEETLFRDIHKHILRQAKSGGRIDTEAEIAERFNVTRYKVRKAL SVLSQMGIVDRAPKRGMTVNALGPKNLSSQIQVQMDIANFDIREFIEARLLIEVNIIPLC VRRMTPALLGRLDNAICRIEANAGNTQEADRWDREFHLILLESCGNRVLQVFSAALITYF EKTTSHLPQNDPSFFMMIAQQERELLRAIQRGDEEGAKALLSKHLKEQVDLLPA >gi|319804830|gb|ADMF01000022.1| GENE 26 35152 - 37848 2765 898 aa, chain - ## HITS:1 COG:RSc1151 KEGG:ns NR:ns ## COG: RSc1151 COG0249 # Protein_GI_number: 17545870 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Ralstonia solanacearum # 18 828 22 830 882 707 50.0 0 MTDAASESPDFSNQALFTPAMRQFIEVKNRYPNTLVLFRMGDFYETFFKDAVIANRLIGI TLTKRGKLTDGTPIPMAGIPAVSLDTYIARLVRQGESVVIVEQKGNTPGAKGMIEREVSR IVTPGTLTDTSLLPEKSDSILLAASFPKKKTAPIGLVWLTLSNGDFRAEEVTPDSFEAAL ARIRPSELLVDEDMKREMRTAHPEIAVSTLPDWHFDAKRGASNLCATFGMSALDAWDVTN RTTVLAAANALLDYIRETQVDLVPFIEPLKLVEESQFIVLDPSTRRNLEVDESLSANGEG PTLFSVMDHCATAMGSREMRRWLREPLRSMEDTSARHDAVEAIMGDEPSREHFFAVLDAL PDVERIASRVSLGTVRPRELASLRDTLPTLSALGASLADSPLDLIAGIGRSMTLNSEIWE RLEQSLVAEPPGMLRDGDTIASSCSPELAELRHFRDDTSRILLEMEERERAATGINTLRV QYNKVSGFYIEVTKGAADQVPMHYQRRQTLKNCERFITPELKSIEDRALSSKERSAALEK ELYDKLVAETAKHTPELLAAAKAAAQLDVLCAFARHAAENRWHRPKLSSRPGLDIRKGRH PVVETAIENYVPNDSRLEDGRRMLIVTGPNMGGKSTYMRSVALIVLLTWAGSFVPAAAAE IGPIDRMHTRIGASDDLAHGRSTFMVEMTEAAFILSHATDRSLVLMDEIGRGTSTFDGLS LAAAIAQELVQKTRSFTLFATHYFELTRLAQELREVANVHVAAAQGSAGIVFKHEIKEGP ASKSYGIAVAQLAGVPAPVVRRARGFLAKLEAQANAQTSNLPDLFAEPMLPAEDDAWEPD PLDAPLQSEPSPADLARQSLTHDLMHADVDNMTPKAAMELLYKFRERAAGIESLEKSE >gi|319804830|gb|ADMF01000022.1| GENE 27 38010 - 38900 1108 296 aa, chain - ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 8 263 1 257 261 263 49.0 2e-70 MPTPTSSLNAFVATATKAARLAAREITRTAQDRDQLEITDKARNDFVTSADKAAEAAIVR ELMEAYPQHGILTEEAGRLGPKSDFLWIIDPIDGTTNFIHGFPQYAVSIALTYCGEPIAA VVYDVAKNELFTAAKGQGAKLDSRRIRVSENDEMRRSLIGTGFPFRPGADIEGYLKGFKN VAERSAGIRRPGSAALDLCWVACGRYDGFWEFSLKPWDVAAGGLIVLEAGGLITDLTGGE EWLETGNVCAGNPKIFAQLLPLVGKLPVNTQTEAPQSEKAQAKNDKARRTLSTKKA >gi|319804830|gb|ADMF01000022.1| GENE 28 39631 - 41166 75 511 aa, chain - ## HITS:1 COG:no KEGG:CHAB381_0630 NR:ns ## KEGG: CHAB381_0630 # Name: not_defined # Def: hypothetical protein # Organism: C.hominis_BAA-381 # Pathway: not_defined # 1 503 1 505 513 520 58.0 1e-146 MKIKSVKIKNFRGYRDEICVDFDNLTVLIGKNDIGKSTILEALDIFFNEGNGIVKWDKSD LNVQAIENGENETIISVCFTELPENIVIDSTVQTDLSSEYMLNAAKDLEIIKKFKASKPA VFIKALHPTNPECCDLLLKKNDDLKNIADILDIECENLSTNSKIRKAIWEHFNSNLNLKE VEINIAKEDAKKICENLSSYIPQYSLFQADRRNSDDDSEVQDPLKVAVKEILTDQEIKDK LNSVADTVKERLQEVADRTLKKLNEMDSGIASTLHPVIPIDKLKWSDVFKNVSISGDEEI PINKRGSGVKRLVLLNFFRAEAERRAKESRHAGIIYAIEEPETSQHNNHQRMLITALKEL SVQPHTQILLTTHSAVLVKELDYNNIRLLNKNTLGETEVTKVEQSALKYSSLNEVNYLAY EEITEEYHNELYGYLEASKLLYAYKNAHPDPKLKYFNTNNNKTYDSILSRYVRDQIHHPE NQENVRFTQEQLKQSTIMMRNFIINLKNQKS >gi|319804830|gb|ADMF01000022.1| GENE 29 41191 - 41583 178 130 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSRAETSGTLSGEFADRVRPPYASDEKRRQAAELFEHGIGYQRASRILDLPANTLRDW ARAWRAGKFRTTISPHLYRYSDAVKRKAVRMRQKGHTWHEIAEATGVGASTCKRWMEKLR KSEAQISSEF >gi|319804830|gb|ADMF01000022.1| GENE 30 41826 - 46727 5409 1633 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0501 NR:ns ## KEGG: Ent638_0501 # Name: not_defined # Def: outer membrane autotransporter # Organism: Enterobacter_638 # Pathway: not_defined # 979 1633 707 1371 1371 115 22.0 2e-23 MNRNFKVVFSKARGALMVVNEATSSVQAKGTKTVIAAAVAALSLGAGVASAAQTFTDVTL DAGDSLTVTSKDGATVYTPAGTVTGTTNATSDNTNKTFAATGDTLGSGADVYLNGGELVL TGTSTDAVVKADDAANNKTTSGTITLNSVASAGAGTPVTYDAIEGGTFSKLDLNLNVFNA AAGGTAGNVSIGNVANDLKIKEGTLKTGTIEGSSTDANKVSGTATITGKDLAFGVAPDPV GDKGETSVTNPGSAYDFDNAADVTLNVTGAGTVAFNKGTITNAGKMTVTGKTGVTVGKEV SIANTGDLTFKDDAKVDFKADYTATAGRLFIESVDNTISGNITADSLKFGDANTDLTKET NQVVITGSTSNTIAYGSTVDVKALTVEDAATTINGTLKAATTAVTDATPAGLTVADTAKT VDQNTITQYAAVSLGDITVGSDKSGATGGITFTLTNNAENAVEASSLTVVKNSTVNTFTL ANGDFSVGKLTNQGNVTLTGGEFSLTGEGSNASGAVITLASSKDDASLVVAEGASLQNQG SITAADDQGKIYVGGTLTNLPKIAATNTTAEVPAGTIKAAAVEVDGVLSTALDAATYDVA ETTINTAGELQTSYNARLDGEAVADQKPANALEIANTIDLAGKITVAGTEVQDYIVNATG GAFTIKEADKTFNTVQVKAGEFKTDDADVTLSVLEVKEAGKATVDSGTLNVTTLKTAAAT NTVTVEDGTLATSLTGLGLKYDATAGFSNVAAAAQVANGSIVLGTSSLLDLDLGSVTEVT SAQLTGLKSLVNDSTSKGLIDIGATQIKEVKESITDGKIEYSKLNAIAGVTNDTIKSLTV TKVGASISGKDAIYGTIEQTDDTSELKIDGVSLTLTGTGNLVSYPDTSVNPKVTKLSNIT FDATNGGTLVTTGEGAQIGQVGDNDQYGSLYVKSGDLTANGNVTVKSLEVESGAKLSLAN DKDGKGYAVTTGAEKVLISGDLAAANSDVTFGSTATATYADGAYSFDYVNKVTGKLAAKT LTLSGDMLVNQGGTVEAATLSGQTVYVGDSASAGSLSVGELTAGSIYADPTWKEDGSAAA VSLVAVKKAAATGASVEADRSSIVSVGTNDVTAGTAAFAKTGFTLAKTDSDKKEYSINTK TVNSVVYAEGAQYAGAVLADGNGTKGTVTSGVYIDGNSMLLIDATKVDATGEKSVFAQGV RMAENSVLYVDNVKNGDKISLTATIAGTSINNADLVHEGDLVMRTNKADREKGVLSFEME NQADLAKSGITGAGFGVIYAMYENGENVGNDNAVFFRNLVSTQTSAAYQQFSNGEYEWNT QTLNTILNDVAAIGATTGAQAVTMDAVNQMADTVAARTSILTQRAQGVNVWVDVNGGRFE GKKVMDGAGYSSDIYAGTLGADYQFANGAVLGAALTIGTADTDSEGTTAKTSMDSDLVGF SVYGSKTFADIWNVAGDIGYLQASNDVTESGYGFGDFSEDVNAFTLGVRGEVLTKAGSVN IVPHLGLRYTRLSTDGFTAGFNTEIDDPNIFQMPVGVTVSADFETSGWTIAPKFDLSVVP TFGDKDADLKLGITGVSASDDLSVRVIDSNPVQATLGVSATNGAWGFGLNYKLGVGSDDR MNNSFNANVRYAF >gi|319804830|gb|ADMF01000022.1| GENE 31 47410 - 47955 486 181 aa, chain + ## HITS:1 COG:RSc1413 KEGG:ns NR:ns ## COG: RSc1413 COG2825 # Protein_GI_number: 17546132 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Ralstonia solanacearum # 29 179 34 184 184 86 38.0 3e-17 MTHSLRLFSAAALTAAVCAVGIASASSAAAAAELKIGVVNMERILRESKTAIEASDRLNA EGQRRQEEIEGISRRFKSRLERFEKDAPAMDETTRLQERRALAEMERDVTRRSREAREEF NQRRNEEVLLLQNRAGRLVQDLAKREKFDLVLYEYFYASDRIDLTKRVIDLLDASSDARK K >gi|319804830|gb|ADMF01000022.1| GENE 32 48090 - 49193 1154 367 aa, chain + ## HITS:1 COG:NMA0087 KEGG:ns NR:ns ## COG: NMA0087 COG1044 # Protein_GI_number: 15793116 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Neisseria meningitidis Z2491 # 23 353 14 341 347 234 40.0 2e-61 MMQTAQMLLSELVDKVSKCSKNRLEMQMVGADVAVSRFMSPAEAGEGDMSFLTDPRYAEA MKATKAAAIVLRERDAKALFGEELPNRTMLLCDDPYAFFAFASQIFYPVKRTPGIHPRAY VEESALVDPTASIEPMAVVQAGAKVGANTLISAGAYIGEDCDIGRDCVIYPNAVLQAGTV VGDGSVVQPGAVLGGDGFGFAPFKGEWIKIPQRGRTVLGTDVEIGANTTIDRGAIDDTFV GEGTKLDNQIQLGHNVRVGKHCVMASCVGIAGSTTVGDHVMVGGAAMINGHIEIPSGSAV GPATAITGWGKEPKQLTGFFPALTKRDFVRAAALTARLPEMREELKNLQKQVAQLAELIQ KAEAADR >gi|319804830|gb|ADMF01000022.1| GENE 33 49357 - 49788 548 143 aa, chain + ## HITS:1 COG:VC2249 KEGG:ns NR:ns ## COG: VC2249 COG0764 # Protein_GI_number: 15642247 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Vibrio cholerae # 1 136 19 152 153 152 52.0 2e-37 MLPHRFPFLLIDRVVELSDELDRVVAIKNVTMNEPQFTGHFPQAPVMPGVLIVEAMAQAC AIIALSRIPEEVRKKSLFYFAGIDNARFKRIVQPGDQLVIEGKFIRSKMGMGWFEAVARV DGQVACQASMMCACREPPKHANE >gi|319804830|gb|ADMF01000022.1| GENE 34 49667 - 49993 91 108 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLRTTTVSRDYTDKALGETEGPAIGHKCRKNEKTAQCSFHWETAQRRRVEMFRPHSPFE ANLPPEPFFIRLHVWAVHGKRTSSTPDRPPDRPHGRPPQTNPYPSSNE >gi|319804830|gb|ADMF01000022.1| GENE 35 50092 - 50880 1070 262 aa, chain + ## HITS:1 COG:VC2248 KEGG:ns NR:ns ## COG: VC2248 COG1043 # Protein_GI_number: 15642246 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Vibrio cholerae # 3 262 7 262 262 254 51.0 9e-68 MTQIHPSAIVDSQAELAEDVVVGPFCLVGPKVCIGAGTVLRSHVVVEGSTTIGARNVIYA GASIGCHPQDKKYRGEDTRLVVGDDNVIRENCTMSIGTIQDQGLTTVGSRNLFMANAHVA HDCQVGSDVILANNVALGGHVIVGDHAILGGQSAAHQFVRIGAYAMVGGAAGVLQDVPPF VMAHLNPAKAAGLNLVGLRRAGFTDEQLRALRKAYGHFYREQLTVKEAVPLIEALKSDYP GASDALQLFIDFVTTTQRGCVR >gi|319804830|gb|ADMF01000022.1| GENE 36 50918 - 52096 1235 392 aa, chain + ## HITS:1 COG:RSc1417 KEGG:ns NR:ns ## COG: RSc1417 COG0763 # Protein_GI_number: 17546136 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Ralstonia solanacearum # 3 384 2 380 390 297 47.0 3e-80 MGTRPTPAIDKNGIAWLAGEASGDYIASLVLPEVEKRFPGTPQYGVGGPRMRAENFHAWH DIRELSVRGYVEVLMHLPRLVQLRGELVRSISESSPRVFVGVDAPDFNLGIEQKLRRRGI PTVHFVSPAIWAWRPERIHQIRRAVDHMLLVFPFEQEIYKRAGIDATYVGHPLAGVIPMK PDTEGARRDYGLMEDSLPVVTVMPGSRIDEVKGCAPAFFGAIEKLLHRFSDMHVLIPAAD EAARERIIFIAGQYARLAQRMIVRVGESHRMIEAADAVLCASGTAALEAALYKKPMVVGY LMPALTGLIMQRKGLIRCVSLPNILMGENVVPEFLQYYCRADQISWALQDALTNDAKRKE LVERFTALHESLKADTPSLVAEVLESRALRRW >gi|319804830|gb|ADMF01000022.1| GENE 37 52206 - 52943 661 245 aa, chain + ## HITS:1 COG:PA3642 KEGG:ns NR:ns ## COG: PA3642 COG0164 # Protein_GI_number: 15598838 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Pseudomonas aeruginosa # 35 224 13 196 201 205 61.0 7e-53 MPRRRASLASASPEAALRDNLFFCDGEGEAHLPLLTAGVDEAGRGPLAGPVCAAAVILDP ENPIEGLADSKKLSAKKREALAPIIRERALAWGIGWATVEEIDRVNILNATYLAMERAVA TLKSRSGSVTPEYILIDGNRRPPHLPCMSDTIVKGDDKVPAISAASILAKTARDHRMAEL DQKWPAYGFAKHAGYGTAQHLDALKRLGPCPEHRTTFEPIKSMLSEKRRSILPMQQRILS AKRES >gi|319804830|gb|ADMF01000022.1| GENE 38 52940 - 53764 627 274 aa, chain + ## HITS:1 COG:NMA1351 KEGG:ns NR:ns ## COG: NMA1351 COG0566 # Protein_GI_number: 15794273 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Neisseria meningitidis Z2491 # 9 272 4 261 261 134 36.0 2e-31 MTSSQHLFIESDANPRLKRWRRLALEAKAVRREGATVLEGIHLLQTVLEHPEVKINAVML PEGRTTAEAKALAERAAQTLGTRLYVLSDRLYDAISPVENGVGVMCEIALPAAPAPEKWA AADALYLDGVQDAGNVGTLIRTAAAAGVRVVVAGPGTAGLWTPRVLRAGMGAHFAVDLAE GISIEKFRADYRGRLLAADARGGVNLFEASDYTAAGPICWLMGAEGPGLSVKALELADER YWIPISRSVESLNVGAAAAVCLFDAARRRLAHRH >gi|319804830|gb|ADMF01000022.1| GENE 39 53948 - 55114 1217 388 aa, chain + ## HITS:1 COG:BS_yugJ KEGG:ns NR:ns ## COG: BS_yugJ COG1979 # Protein_GI_number: 16080189 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Bacillus subtilis # 1 386 1 385 387 260 38.0 3e-69 MLNFSYANPTRLVFGRSAEHEVGRVMTSILGRPGKVLVLFGGGSAHRTGILGAVENSLQE SGFAVIEMGGVQPNPRMGFVRDTIDWVRDQGIRAVVAVGGGSVIDTAKAVAAGLEYEGDA WDFFAGRAQVERALPVFAVLTIPAAGSEQSIRAVITHHGTKTGIGSEHIRPKAAFINPER FSTLPAIHISAGVCDMLSHICERYFSNTAATDFVDGQAEAALRTIIAFGPKVLADPSNYD AWCQIGLAGSFAHNGIFGLGREEDWACHAIEHEISGWNESIIHGCGLAVVMPAWMQQVCH VNPKRFADFARRVMGVGQDADDAAAAALGIEAFKAWLKTMKLPLTLQELGAVDCPIEALA RHCCRKGAVGHFKPLEKADVEALLRAVQ >gi|319804830|gb|ADMF01000022.1| GENE 40 55145 - 55456 260 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAQQNKGKGRSRRSGSGSTKGQNTLQHPGAVLAQILEDTPTALAAKWFSLSEAELLAVLE GRAPMTAAMAQQAGAVFGTGSAPWLEMQSAWDAAHAETNAPQH >gi|319804830|gb|ADMF01000022.1| GENE 41 55554 - 55988 485 144 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|237745902|ref|ZP_04576382.1| ## NR: gi|237745902|ref|ZP_04576382.1| predicted protein [Oxalobacter formigenes HOxBLS] # 10 138 4 132 154 82 35.0 1e-14 MLRSQPALFKFCLCALLSTCAAGTACAASAADELADCLYANTSAQDKTTFLQWAYVALGR TEAAKSVQTIPAAKIKTVEKKAQTTLTQLVMKSCPKPAMNLLLSDPKKGLEKTLTSLAGK LVQAEVEKRTSPLLSMTITDLLKR >gi|319804830|gb|ADMF01000022.1| GENE 42 56184 - 57170 744 328 aa, chain + ## HITS:1 COG:HI0906 KEGG:ns NR:ns ## COG: HI0906 COG0590 # Protein_GI_number: 16272843 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Haemophilus influenzae # 158 316 6 165 173 154 51.0 2e-37 MYRLIDSSYTLADIGRFTELSIRRGIPLASVVKTEPRDRRVVVGAALLFVPTVAFSEETL LQRFEGFLQGAGSWLKAEPAELLASALEEGLLEAAEDPQDGAPARWRSRLEPLPGVTANR LADELEAAQEILKLRRARMRETLQAKNREVNRPPEPPVDAEADRSFMRMALEEAQEAGMA GEIPVGAVVVADGKVIARGGNETLRSGDPTAHAEIVALRAAAAALANHRLTNTTLYVTLE PCPMCAGAIAEARCRRIVYGAGDSRRGALEGAFRLFDIPGVNHRPLVTGGVLALEGEKLL TDFFAKRRGEQAAQKAAESSDPPQNCAQ >gi|319804830|gb|ADMF01000022.1| GENE 43 57230 - 58261 1081 343 aa, chain + ## HITS:1 COG:RSc1452 KEGG:ns NR:ns ## COG: RSc1452 COG1619 # Protein_GI_number: 17546171 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Ralstonia solanacearum # 49 332 15 293 308 166 41.0 6e-41 MTTPDFGASHWLNAQYDAVPETSLAAYRGRRIVIPAPSYQFLTKTGEIDHARREAALGNL EALGAVPTLMAGALTQDGRYAGPDEVRAADFQAALTRDPAEADLVMPIRGGYGMTRLLPL LDWEAIGRAAVPMVGFSDFTAFNLALLAKTGRASWHGPMLGSFDNPDPYMVERFAVVFGA ELDPIEWEADPHLLGKWADQSEQRATGLLWGGNLCLIESLVGTAWMPPKEMLEGGILFLE DVGEYAYRVERMLLTLLDAGILARQKAVLLGAFTNADDSIRFSGDHSLADSLAYIRRRLP ASIPMVTGLPFGHIAKKATLPIGVMAELTLHAGRAALSWKEMP >gi|319804830|gb|ADMF01000022.1| GENE 44 58258 - 60327 1512 689 aa, chain + ## HITS:1 COG:SMb20164 KEGG:ns NR:ns ## COG: SMb20164 COG0642 # Protein_GI_number: 16263912 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Sinorhizobium meliloti # 228 587 352 707 747 154 30.0 7e-37 MTAEPDREARTTGQTTTRRSVILFLKTFLSLPASRSITARTLIKLFLTSMKLMPVALAAQ CFGMAGIDAVMRTKPEMFELLLVWSFFGFAQLIASLAFVRSLWRDARRVERVRLWIRRWT ILASCAGLLWGAAGAVIMVPLAGVQQLVAVAVIVAVTFASWPVYSCWMPSLTAFTLLSLT PMTISVAAQYGVSQAIMALVLITVTGFILYSGRRLNEMLLSSILNDDENQRLVQRLKVEV NRTEAARLKTQHESERRAQFFAAANHDLRQPLQAMGIFLEMLKRRSTPQTLPIVEQLGRT SSTISTLVEQVLEVTRMEFGRLELHPEVIWLPELMEELSHDFTAIAAEKGLSFRVKSVPA AVCTDPLLLKRALKNLITNAIRYTDKPGAEVVVGARRLGSSRVSIGVYDAGPGLTTEDKA RIFETFYRGSAGKKSTSEGFGLGLSIVKRICRQLGIEFSMGTKLGRGSVFRLVLNLTEGE QVEMLERPGAPAVINSRLGGTTALLEDNPFVNEALSAKLSLWGTDVVAAPAFSEDFVKRV QASAGKTGRLVLLTDYNLGAGELTGLEASTELSSRLGMNVPTVLLTAVAGDLIEADWTQA RKKGKAGRMPEVLPQILQKPADDVALNSALVRAGRNAAYWRSEEPVESDLEAAEDPGGDE GKTDGGAASEGAASSSSGTPEPNEIVRGI >gi|319804830|gb|ADMF01000022.1| GENE 45 60373 - 60909 543 178 aa, chain - ## HITS:1 COG:ECs5154 KEGG:ns NR:ns ## COG: ECs5154 COG1959 # Protein_GI_number: 15834408 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 132 1 131 141 97 35.0 9e-21 MHITRFTDLSLRVLMYLCARPSQDRTTVTEIAERIGWTRNHVVKVVHRLSQEGWLATQRG RTGGLGLDPQARKLRLGNVIRTLEGDDCLINCKDPPCNFGRGCPLIKVLNDAQNVFYEAL NAYTLEDVAQHSVLAHLFAPSSTGKVVPIIPAGVLPNKDQSRTSDDAGLLKLVNEGGI >gi|319804830|gb|ADMF01000022.1| GENE 46 61028 - 62245 1689 405 aa, chain - ## HITS:1 COG:SMa1191_2 KEGG:ns NR:ns ## COG: SMa1191_2 COG1018 # Protein_GI_number: 16263102 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Sinorhizobium meliloti # 152 400 1 246 252 181 40.0 2e-45 MLTPHQIELVKATVPVLQAHGVDLTKHFYARMLSKNPELRNVFNQAHQARGAQQQALAAA VLAYAQNIEHPENLLGAVKQIAQRHCSLGIRAEQYQIVGHHLIESIKEVLGAAATPELID AWTAAYGMLADILIKAEQDIYNQQTAAQGGWSGWRPFECVNRVQESEDVVSFYFRPTDGG PVPSYLPGQYTTVRVFSKAMQIAQPRQYTLSQAAGSGMLRISVKLVLGTQGAPDGLVSSI LHNRVKVGDVVELSAPTGGFALEDAKSEHPLVLIAAGIGITPMVPMLETLAVENPLRKVH FLYTTQNLAHYPLKKEVDAAIKGMPNAAKGIFFTQPGQADHLGVDYDAAGRITPANIRNF CQDPDADFFICGPIGFMQDVSKALKDIGVIPARIHTEVFGTGSAD >gi|319804830|gb|ADMF01000022.1| GENE 47 62330 - 62527 123 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSWGHSSTLAAKKMYFQYIFLLQNVYASFQCMTQEMKIGFSKCAIGKFPQYIPSAVIDGC ILAIY >gi|319804830|gb|ADMF01000022.1| GENE 48 63015 - 63503 340 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRFFSRSGCGKFSAVISAGLSAAALLMISGCSVVQVNGTERTADDALCLVRPQIADPALH KLLKDLLTRKRFKVTELAPGTSPNVCRQTLVYRWGVEQYYVPALVKQYPVAFDFYESGVK VANASFDPTRNLISPHVKFVRSSRYWARTLDKLFPGRPLVGD >gi|319804830|gb|ADMF01000022.1| GENE 49 63672 - 65315 2255 547 aa, chain - ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 546 1 555 556 540 49.0 1e-153 MKTDIEIAQETKLIPINELAHSAGLADSEFEPYGRDKAKVTLDPSRQEKGRLILVTATSG MPAGSGKTTTSIALAQGLKRLGKNAALALREPSLGPVFGMKGGAAGGGYSQVLPMEAINL HFTGDLHAITAANNLLAALLDNARHQGQVQLREIYWRRVLDVNDRMLRNIITGLGGPANG IPTEAGFDITAASELMAVLCLANDLEDLRSRIDRIVLGLRPDGTAYTCGELGATGSLLAL LFEAFKPNLVQSIEGNLAFVHGGPFANIAHGCNSVAATRAAMKLADYAITEAGFGSDLGA EKFFNIKCRAAGFAPAAVVIVTSTKALKWHGGVPLPEIGEPNLEAVKCGIVNLDAHIANL KQFGPNIVVALNHFHTDTEAEIEVIRARCAELGVRFAVSDGFAKGGEGAEALAREVVAAA EDFHPLVHTYEADAPIVDKLNAIVTKVYGGDGVKLAPAALKDLKRIEELGFGKLPVCVAK TPFSLTADPKALGAPKGFTLPIERLILNAGSGFVVAMSGSIMRMPGLPKKPAAMSIDVQN GRITGLA >gi|319804830|gb|ADMF01000022.1| GENE 50 65344 - 65595 94 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEFDMRRRRVVLSVYIEGAQQQSWSRHPPMVSDEETSRKAARSAAFDAPLRGCAAVCLKS RENRGQQAPKMEKAPPKQIGRCL >gi|319804830|gb|ADMF01000022.1| GENE 51 65610 - 66233 765 207 aa, chain - ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 207 14 213 218 158 41.0 5e-39 MESNNNKPLIRIIDDDAGVRSSWSFLLSGENYECVEFSDADTFFSANDFRRPGCILLDVR MPNMSGLELQNKLKEIGCDLPIVFVSGHADIDMAVNAVKNGAFDFLEKPAKESRLIDVIE AAVARNKANRRDQAEVADFKARLEQLTQREREVIRMVAQGYSNKEVAAEFGISEKTVQVH RGSAYRKLELHNAAEIARLLLLSGDPL >gi|319804830|gb|ADMF01000022.1| GENE 52 66413 - 66952 448 179 aa, chain + ## HITS:1 COG:CAC2475 KEGG:ns NR:ns ## COG: CAC2475 COG3467 # Protein_GI_number: 15895740 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Clostridium acetobutylicum # 9 164 3 153 154 78 30.0 6e-15 MTISAQPQRPMRRRDRELPREEALRAARAAGHAVLSFIHPDTGVPQGVPISPVVTPEGIV YWHSTNEASLKGEGLKKDPRASLTFIAYAEDLPEEYTVDYASTVMTGRAHIVTDPQERRQ AMLEICRRYAGADRDATSTEYFDHAGSQIDVWRFDPEMVSGKSRSWTEKVSHILAKQGF >gi|319804830|gb|ADMF01000022.1| GENE 53 67003 - 67494 669 163 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMLKRASLFAVLLCAGIAAAGCASSPKSPAEPADESAQFAPVNYLDICLLENNEVKSPKL VDAIESGFRKAGANVKRLRAGSGPDACSFVVTYEVPNKQGSVNVIRYQTYEHGIPRVDAT GSAPQGRALTVQAVEAYSAELLSKLAHKKAGVEGGQSAVPSKE >gi|319804830|gb|ADMF01000022.1| GENE 54 67835 - 69529 1408 564 aa, chain + ## HITS:1 COG:PA4973 KEGG:ns NR:ns ## COG: PA4973 COG0422 # Protein_GI_number: 15600166 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Pseudomonas aeruginosa # 52 563 40 597 627 515 50.0 1e-145 MSTSSTDPSARTPIPPVLPAEDLSGASGDLGLFAGRLPGVREYSRSACGELVPFRRVDLD PTPASFGGGVQPAIYLCDVTGPFGEGDGSQKPRLRNRPSPGTPTQYESARAGVVTPEMAF VAERENLNRKVFLESLAKLGNPKVRALYQRAAEAPFWTPEDVRSLVARREAVIPLNFNHP EAEPMAIGKAFSTKVNANIGTSSTSKDWHEEIGKLRESLLCGADTVMDLSTGKSIVETRE ALLRRSPVPLGTVPVYEALERAGSPEALDWEIFRQTMEDQAAQGVDYMTIHAGLLKSHVA LTRERLTGIVSRGGGLLALAMKLTGEENFLYTHFDEILAIAKHYDVTLSLGDGLRSGSTH DGTDAAQLAELKTLGELNRRAAKAGVQVMIEGPGHIAIPRIRLNQELEEVWCDNAPFYTL GPLVTDMGAGYDHITAAIGGAIIGAAGTAMLCYVTPKEHLGLPNEADVREGMAAFKIAAH AADLARGIPGADLRDLAISAARFEFRWNDQFRLAVDPARAAAFHDETLSGSGAREAHFCS MCGPKFCPMKLARDLFDDEPSSGA >gi|319804830|gb|ADMF01000022.1| GENE 55 69672 - 70139 412 155 aa, chain - ## HITS:1 COG:MT2428 KEGG:ns NR:ns ## COG: MT2428 COG0735 # Protein_GI_number: 15841871 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Mycobacterium tuberculosis CDC1551 # 8 138 8 130 130 58 31.0 5e-09 MPRSTRYTTRQRAAVLACLKERTGQYLGVQDVADAVKKLGVSVGLTTIYRNLDTLVEEGA VRKFVVDKNSAAVYEYLDDPHTEEFHVKCRACGTLFHLRCSEIERMAAALSGHLLEDHGV ELDFQSSVIQGLCKDCRAKADAAKAAAADQTIEND >gi|319804830|gb|ADMF01000022.1| GENE 56 70186 - 71055 721 289 aa, chain - ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 5 259 1 255 268 201 46.0 9e-52 MFESLFEALQMSFMQRALAATLAMSLLCPVMGLFLVLRRSSMTGDALSHSSLAGAAAALA LGVNPVVGTFVFTAVCGLMIEALRSVFRHYGDLVLTIVQALSVGIALTLITMGLVKGNAE SFLFGSILTISQTDLWCILAITAAALLWVGFGLSTLTVIAFDEDSARAAGVKTRRWSYAF SLLTASAVAAAIPMVGVLVLSSMIALPAATALQLKVGFKRTLIAAIVISIIDAFLGLIFA YLLDAAPGGVTALASVAVLLLVLICRAAIRRFRHDCAAAAAVKKSTEIV >gi|319804830|gb|ADMF01000022.1| GENE 57 71048 - 71737 602 229 aa, chain - ## HITS:1 COG:CAC2877 KEGG:ns NR:ns ## COG: CAC2877 COG1121 # Protein_GI_number: 15896131 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Clostridium acetobutylicum # 1 195 1 196 220 174 44.0 2e-43 MVSIFDLCFSYTEEPPYLLNHLSLDIPAGAYWSVVGPNGAGKSTFIKLVLGLLKPTSGRI EISAQGVGYVPQMSAPAAASFPITAEEVLDSWRRMRGIRSKDSIDHALSSVGMSAARHTL FGDLSGGQRQRILIARALLGDNDLIVLDEPSTGLDRAGRDEIYDLLTHLNHKHGTTIIAV EHNLEAVYKCSSGVLEIENGQWALHAPAEYQKRIETEERAYVSSEAEHV >gi|319804830|gb|ADMF01000022.1| GENE 58 71850 - 72779 1034 309 aa, chain + ## HITS:1 COG:CAC1593 KEGG:ns NR:ns ## COG: CAC1593 COG0803 # Protein_GI_number: 15894871 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Clostridium acetobutylicum # 34 308 24 298 298 267 47.0 2e-71 MLSQKVFTAAASSVLCLSAGAAAAAPADDLVCKDAAAQGKIVAAASFNAMAEFTRAVGGD YVCVETLIPGGTEPHDFTPTVRTVEALKKADLLILNGFGMEPWAEKTAAAAANDHLTIVT ASAGASPVELTDPEEVKEHGANDPHLWLSLSGASLEAKNIAAALAKRDPKHAQTYEQNAE RFAADLDVLKKQFIKDTADAKRRAFVTGHAAFGYLARDFGLEQKSIEDLFAEGEPTMKTL AELAKYCRKNNVKTVFAEELVSPAASKTLAEEAGAKVVAIYTMESNESGLSYLERMKRNL TEIAKSLKE >gi|319804830|gb|ADMF01000022.1| GENE 59 72970 - 73806 1219 278 aa, chain + ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 3 278 1 260 260 264 52.0 2e-70 MQLKKLFAALAVSGGLVFTLAGCGDKAPAEKTAAPAQTAAVELKIGVSPVPHADIINFVA PTLEKEGVKVKVIEFNDYVQPNLALSEKELDANFFQHKPYLDTFSKEHKLNLAVLTAVHL EPMGVYSKSIKNVADLPDGAKIAVPNDPTNGGRALKVLETAGILKVRPEAGILASPADIV DNPKHVKIVEVEAAQLPRALDDVDAAVINSNYALAAKLNPTKDAIAIESKDSPYANVVVV RAGDENRPELQKLKNALLTPEVKKFLEEKYQGAVVPAF >gi|319804830|gb|ADMF01000022.1| GENE 60 73987 - 74847 974 286 aa, chain - ## HITS:1 COG:CAC1958 KEGG:ns NR:ns ## COG: CAC1958 COG0656 # Protein_GI_number: 15895230 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Clostridium acetobutylicum # 11 286 8 274 274 249 41.0 5e-66 MTATQPLTETTVLANDVKMPTIGFGTWQIPINENFDSTIQTAIQLGYRQFDTAQIYNNAQ RMGEAIRASDVPRSEFFLTSKIWASHRSYESAREAYEMILTQMQTDYLDLLLIHWPAAQG EPMVWQAQNAGAWRALEELYTEGRVRAIGVSNFLPHHLVPLLARARVKPMVNQLEIHPGY AQPAAVNFCRAKGIQVQAWSPLGRGTLLRHALLEKIAAAHGKTPAQVALRWCIERGIAPI PKSTLFAHQQENLNVFDFSLTPEEVNELTAMPQTSFSGLHPDTVTF >gi|319804830|gb|ADMF01000022.1| GENE 61 75224 - 76597 870 457 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQHIDPELFTWLFIGAVGLVAGVWGLTRAASRRRGEAELSRLGKTSAAAPRRRERIAARR PDVPKAVKKETVESKAPQHGPGRPAAFLLKSADGRTIVLQRAPEAECREGLERLYACAGD AAALEDEQNKLDAAAQQLALRGGALEWSVDSDLAHNAFVLCCAKTQEAPATASAAALGTG GLLMGNSSAIDGAEPLFAAVEEGFRIAAAPEGVLLRSLNDCLESAEKHLSRLEKLSPQRT EDWLQTADKIKALGEEAQRLTINGNWADWDTALTLEVIDALTQSVDERILKIDAALEAAG ESDALTALESADTALKRAYGLLLERISAVLLLEALAASNVLYSTDYCRGMHSASRIAWRA EAFPSTQKITNAVHALILQTAETSGRTMTPQELDLLGAVKQDAKMLEALESASSTELQNG IKALQRVMDRRLLAEHPIARLMICMDGDGAAHFTRPL >gi|319804830|gb|ADMF01000022.1| GENE 62 76782 - 77109 190 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 18 106 21 109 584 92 49.0 1e-17 MSSSPKPWSFSTYTDADGRTYVYGYRNRWDPEKKQSRIEKRCHVGRLDPQTGQVHLGRKF LTNNPEYAGKFWLYDNNQLIEQEPFEQPDTDNEPQPSWRGEDVELGLTW Prediction of potential genes in microbial genomes Time: Sun May 29 19:47:46 2011 Seq name: gi|319804780|gb|ADMF01000023.1| Sutterella wadsworthensis 3_1_45B cont1.23, whole genome shotgun sequence Length of sequence - 45148 bp Number of predicted genes - 44, with homology - 35 Number of transcription units - 25, operones - 13 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 14 - 418 185 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein + Term 507 - 541 -0.7 - Term 441 - 479 5.5 2 2 Op 1 . - CDS 499 - 1173 671 ## Dd703_0256 hypothetical protein 3 2 Op 2 . - CDS 1184 - 2818 2183 ## COG1297 Predicted membrane protein 4 2 Op 3 . - CDS 2917 - 3852 1293 ## Dd703_0255 protein of unknown function DUF1177 5 2 Op 4 . - CDS 3889 - 4563 608 ## COG4126 Hydantoin racemase 6 2 Op 5 . - CDS 4585 - 5535 893 ## Moth_0211 hypothetical protein 7 2 Op 6 . - CDS 5575 - 6120 522 ## COG1846 Transcriptional regulators - Prom 6179 - 6238 5.0 8 3 Op 1 1/0.167 - CDS 6457 - 8073 1653 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 9 3 Op 2 . - CDS 8166 - 9581 2026 ## COG0531 Amino acid transporters - Term 10010 - 10039 1.2 10 4 Tu 1 . - CDS 10096 - 10635 542 ## - Term 10744 - 10788 7.4 11 5 Tu 1 . - CDS 10829 - 13693 3279 ## COG2217 Cation transport ATPase - Prom 13745 - 13804 2.5 + Prom 13724 - 13783 4.5 12 6 Op 1 . + CDS 13896 - 14366 292 ## COG0789 Predicted transcriptional regulators 13 6 Op 2 . + CDS 14441 - 14980 671 ## + Prom 15000 - 15059 2.5 14 7 Tu 1 . + CDS 15166 - 16317 1287 ## VV2_1131 isoaspartyl dipeptidase + Term 16424 - 16459 5.0 + Prom 16763 - 16822 2.0 15 8 Op 1 . + CDS 16872 - 17039 240 ## 16 8 Op 2 . + CDS 17057 - 18592 1891 ## COG1495 Disulfide bond formation protein DsbB + Term 18659 - 18710 15.5 + Prom 18655 - 18714 2.9 17 9 Op 1 . + CDS 18935 - 19939 945 ## COG1295 Predicted membrane protein 18 9 Op 2 . + CDS 19879 - 20169 182 ## 19 10 Tu 1 . - CDS 20166 - 20351 138 ## 20 11 Tu 1 . + CDS 20263 - 21006 956 ## COG0790 FOG: TPR repeat, SEL1 subfamily 21 12 Op 1 23/0.000 - CDS 21080 - 21778 766 ## COG4149 ABC-type molybdate transport system, permease component 22 12 Op 2 . - CDS 21824 - 22558 937 ## COG0725 ABC-type molybdate transport system, periplasmic component 23 12 Op 3 . - CDS 22574 - 23239 210 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 23281 - 23340 3.6 - Term 23378 - 23428 12.1 24 13 Op 1 . - CDS 23518 - 24372 999 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 24479 - 24538 2.0 - Term 24459 - 24501 7.2 25 13 Op 2 . - CDS 24555 - 25337 1268 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 26 14 Tu 1 . - CDS 25441 - 26046 564 ## COG2917 Intracellular septation protein A - Prom 26114 - 26173 2.1 27 15 Op 1 . + CDS 26465 - 29221 3483 ## COG0612 Predicted Zn-dependent peptidases + Term 29244 - 29288 11.7 28 15 Op 2 . + CDS 29297 - 29719 419 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 29969 - 30005 2.4 - Term 29780 - 29816 1.3 29 16 Tu 1 . - CDS 29892 - 30773 626 ## COG0560 Phosphoserine phosphatase - Prom 30815 - 30874 1.9 - Term 31043 - 31075 1.2 30 17 Tu 1 . - CDS 31094 - 32518 2128 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 32689 - 32748 3.6 31 18 Tu 1 . + CDS 33036 - 33872 612 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Term 33902 - 33943 10.1 32 19 Op 1 . - CDS 34016 - 34360 466 ## Sputcn32_3388 hypothetical protein - Prom 34550 - 34609 2.7 - Term 34506 - 34554 1.9 33 19 Op 2 . - CDS 34649 - 36199 2233 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 36503 - 36562 3.8 34 20 Op 1 8/0.167 + CDS 36751 - 38634 1480 ## COG0642 Signal transduction histidine kinase 35 20 Op 2 . + CDS 38631 - 39281 493 ## COG4566 Response regulator 36 20 Op 3 . + CDS 39278 - 40759 1228 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 37 21 Tu 1 . + CDS 40810 - 41577 645 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 41618 - 41652 -1.0 + Prom 41890 - 41949 6.8 38 22 Op 1 . + CDS 42135 - 42686 523 ## 39 22 Op 2 . + CDS 42716 - 43288 496 ## 40 23 Op 1 . + CDS 43423 - 43815 389 ## 41 23 Op 2 . + CDS 43818 - 44129 412 ## gi|302861030|gb|EFL84105.1| hypothetical protein HMPREF0189_01468 42 24 Op 1 . - CDS 44158 - 44304 76 ## 43 24 Op 2 . - CDS 44309 - 44614 442 ## BDI_1714 putative permease 44 25 Tu 1 . - CDS 44732 - 45049 290 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319804780|gb|ADMF01000023.1| GENE 1 14 - 418 185 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 2 134 450 584 584 102 40.0 7e-21 MGNFVIRTNVVQDPFIALSIYRARNIVEQSFQQFKNQTAGDRLYATSSTYMGKLFVQILA QSLRLMMRMACRRNETATNRLPSNSLTKAFMQLRYLKANKPTDRNAWKTKEIPKKIRDLF TLLGLPLPPRVFRD >gi|319804780|gb|ADMF01000023.1| GENE 2 499 - 1173 671 224 aa, chain - ## HITS:1 COG:no KEGG:Dd703_0256 NR:ns ## KEGG: Dd703_0256 # Name: not_defined # Def: hypothetical protein # Organism: D.dadantii # Pathway: not_defined # 3 213 5 215 226 231 54.0 1e-59 MKKFATLTIGQAPRPDLAPVFNAIAPAGTEVVHAGCLDGLTKAEVDKQFAPVGSEGLLTS RMLDGTAVVLGKSAVRKALQEKIHQLEKAGCSPIVLLCTGEFEGLTTEKVRLIEPDRLLP PVFAALLNPLQVGVMVPLIEQAQSELNKWKGLDKPPVFAAASPYTASKEELQEAARKLAH QGAEVIVLDCMGYSKTLRDICAEAVDVPVIASSTMVAELTANLL >gi|319804780|gb|ADMF01000023.1| GENE 3 1184 - 2818 2183 544 aa, chain - ## HITS:1 COG:PH1047 KEGG:ns NR:ns ## COG: PH1047 COG1297 # Protein_GI_number: 14590884 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 9 538 4 522 527 466 48.0 1e-131 MSEIETPPLQQHPKVWDPATLVLLVILCVFGAIIGVQLLVSLGVTPNTAIIGAMAAMIVA RVPLKFFGHYRSVHVQNLAQSATSAATFGAANSLLLPIAIPWLFGRPDMVVPMFIGVALA MLLDGFLLYKLFNTKLFPATGAWPHGVAAAESIKAGDQGGKQAVLLGIGIFLGALGSFFK FPTAALGTAFIGNVWALGMLGIGFLLRGYSSPVFGIDINALYIPHGIMAGAGLVALIQII FLMRGKKDDAHDERAAAEKAHAAKHGVEMPEHKDEQIGRTIGIGSIGFALISVLIAFGSG MYHHMSVGWLIAFMFYAAFAAFVHEMIVGLAAMHSGWFPAFAVALITLLVGILIGFPPEA LAMLCGFAAATGPAFADMGYDLKAGWILRGNGKNPAFELDGRRQQFLAASMAFLIAIPVV AFVYQDFFSQGLVPPVAKVYIAAIQAGVSFDIAKSLLIWAIPGALIQFIGGPSRQMGVLL ATGLLINNPMAGWAVLIGLGIRIAVLKIKGPDARGPLEVLAAGLIAGDALLSFFSSIIPG LRHK >gi|319804780|gb|ADMF01000023.1| GENE 4 2917 - 3852 1293 311 aa, chain - ## HITS:1 COG:no KEGG:Dd703_0255 NR:ns ## KEGG: Dd703_0255 # Name: not_defined # Def: protein of unknown function DUF1177 # Organism: D.dadantii # Pathway: not_defined # 1 306 1 306 313 378 60.0 1e-103 MSFKQVIELADLLDDGRVTGEDVVKYVTAEGNVKATCTTVTGAKGSTDFVKFLIPGKNGK TKGGTAPTLGIVGRLGGLGARPERIGFTSDGDGALAASAIAAKLARMTVRGDELEGDVIV GTHICPDAPTLPHKPAPFMDSPVTMDVLNKEEIDPAMDAILSIDTTKGNQIICHNGIAIS PTVLDGYILRVSEDLLYIMSVTTGKLPATFPITQQDITPYGNGLYHMNSILQPSVAAHMP VVGIAITTETVVPGCGTGATHLVDVDDAVRYSIEVAKAFTQNECSFYDKKEFELITKLYG SMTHFQGSGQH >gi|319804780|gb|ADMF01000023.1| GENE 5 3889 - 4563 608 224 aa, chain - ## HITS:1 COG:PH1054 KEGG:ns NR:ns ## COG: PH1054 COG4126 # Protein_GI_number: 14590891 # Func_class: E Amino acid transport and metabolism # Function: Hydantoin racemase # Organism: Pyrococcus horikoshii # 6 207 8 211 228 154 42.0 1e-37 MTHPKTLAVIRVFSSTDQKVLEKHAKIIEKLYGIPTRTYCIPNQPEGIANEEIAKDCVER IVEQCLRAEKDGADAVLVSCAIDPGVEAARKVCRIPIFGAGSCAAAMALTMGSRVGVLSL IAGDVPSVPRSILGDRMVAAVGIDGVKDTRDLLTDWGRAGAKKCVEELAKKVDVIMFSCT GFSTMGIAHWFPDLNVPIIDAIEAGGAAVDRYFAVSSVQGPLDL >gi|319804780|gb|ADMF01000023.1| GENE 6 4585 - 5535 893 316 aa, chain - ## HITS:1 COG:no KEGG:Moth_0211 NR:ns ## KEGG: Moth_0211 # Name: not_defined # Def: hypothetical protein # Organism: M.thermoacetica # Pathway: not_defined # 1 311 1 309 312 364 64.0 2e-99 MTFRSVIDLLELLDDGRTTGAQVAEYLSALGSAKVSVKRVEGDKPGTFTDFIRCEIAGTR GKISSGSAPTLGIIGRLGGVGARPARKGFVSDGDGALAALAAAAKLIKMQPRGDRLEGDV IVTTQVCENAPTRPHEPVPFMSSCVDQYVKNRYEVDPAMDAILSVDTTKGNRIINKRGFA LSPTIKEGYILRMSEDLLSLMSVTTGKLPAAFPLTQQDITPYGNGLYHMNSIVQPAFAAK VPVVGVAITTESSVPGCATGATHVEDVDDVVRFLVEAAKEFTAGRLHFFDEAEFALLTRL YGTLERFQTAGNPSAS >gi|319804780|gb|ADMF01000023.1| GENE 7 5575 - 6120 522 181 aa, chain - ## HITS:1 COG:SMc00380 KEGG:ns NR:ns ## COG: SMc00380 COG1846 # Protein_GI_number: 15964053 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 15 168 6 160 164 87 34.0 2e-17 MTDQNRTAETEQARDLVDTFQLEWDASYPGMHFKCVPSVTRLVRMGEYIARAVDETLAEF DLNRGEAEVLFALVRNPHIDITPKVIQTRILVSSGGLTRRLDRLEEKGLISRLPDPNDRR GTVLKPTKDGIVLALRAHKAHTEKEARLVATLSENEKKTLEKLLKKLILSQEDAISPGGL Q >gi|319804780|gb|ADMF01000023.1| GENE 8 6457 - 8073 1653 538 aa, chain - ## HITS:1 COG:FN0649 KEGG:ns NR:ns ## COG: FN0649 COG1574 # Protein_GI_number: 19703984 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Fusobacterium nucleatum # 1 533 1 539 542 249 30.0 7e-66 MSSILIRNARVYVDRGHFEEALLSVDGIIRAVGSNESVAAQAPADAQIYDARGRLVVPGF NDSHQHLLNTGIALTDIRLQNASGIADVKRIAREYIAKHQPAAGAVLHGMGWNQDYFTDE NRLLTRADLDDISTDYPLIFERACGHLLTANSAALALAGIDDTFVPPEGGSAERDANGHL NGVFTENARAKLTALFRNRTVEQNVHLIRAAMKHAAESGVTSVQTCDLRSGSWPTVLEAY NRVEADHPITRVYHQSSFQNLDEYREFLAAGHVTGQGSPMNRFGPLKLFVDGSLGARTAL MRSPYHDDPSTCGIATLTVDELQGLVNEAVDHKCSVIIHAIGDAAIERVLNAYDAVCTEG KNPYRLSVNHVQITDTPLVERFTKNDILAAVQPIFLHYDTKIVDARVGAALASTSYAFGT MKKLGIHMSFGTDSPIEDMNPIDNLYCAVTRRRLDGQPEGGWHPEECVDIYDAVDAYTAE SAYAEFEEGVKGRLKPGFYADLVVLSKNIFEMDPLELRSTKIDATMVDGKFVFERPGA >gi|319804780|gb|ADMF01000023.1| GENE 9 8166 - 9581 2026 471 aa, chain - ## HITS:1 COG:BS_ykbA KEGG:ns NR:ns ## COG: BS_ykbA COG0531 # Protein_GI_number: 16078351 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 15 459 3 436 438 219 32.0 9e-57 MAASSTPSAASGGSTETIGLRREVGLFGGISVLAGIMIGSGIFYIGGIVLERSGGNLGLA LLVWAVGGLITLLSGICFAELGAMMPKAGGYYVYLREAYGERVAFMCGITNFFLSSAGSI SALALAFAAAISSMVPMGELAQKAIALGSILLLTLINIRGIRQGSMVQNIFMVLKLLPIA LIIICGLAMGNESPNWFSFPEGVETPSIGTILSMMAFAVLATLWAYEGWTNLNTIAEEIK EPKRNIPLALIGSIIGVAVLYVLFNFAVYKVVPYDLIQKMISERNFYLGTVAADTLFGTW GMVIVGAAMMLAIFNSLNGCIMVFPRMYYAMARDGALFEFLGKLHPTYRTPINAQIASMV MAMILVCSRSLSELTSLVAICGLIFHGLTFLSVIVLRRKYPTLERPYKVWLYPFSIILVL IFMLSLIVNTIWQDPVTAALGLIVPLIGLVIYEVLFRRRHDALERAKKNLQ >gi|319804780|gb|ADMF01000023.1| GENE 10 10096 - 10635 542 179 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSDPLNLEPKNGDFVDYIESLQASSQKNLDGITPPMTADHHIGLPPNAAGRADDGISLK DLIAAFRRKTGMPKASPQDSSREAALARMESSANPNAPEPVIAKPKKLDPAAKFAVSICW MLGFMGTAIGVNEDQPAVLMFAAFVFFVGVILAVKFNSTAQNGGQSAFGKRRINRAGRK >gi|319804780|gb|ADMF01000023.1| GENE 11 10829 - 13693 3279 954 aa, chain - ## HITS:1 COG:PA3690 KEGG:ns NR:ns ## COG: PA3690 COG2217 # Protein_GI_number: 15598886 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Pseudomonas aeruginosa # 231 925 46 737 740 504 44.0 1e-142 MKTLTLHFPDMCCPVEFGPVEHALAALSSDIRAVPDYSVRRVKINVPDRSPLEKNAILAA VSKTGQSFDVAASSGWSDDPSFDRVRITVPEMDCPVEAGEIERELKKAGITDYQIDIMNR RILTSPAAASGVMAAVRSAGYEGSIDAADTAADNRVRIAVPEMDCPVEAGEIERELKKAG IADYEIDIMNRRILTSGDAAHGVLAAVKAAGYDGTLEAEASASTAKGQTLLSVPEMDCPV EAGEIEREFNAAGIKGYEINVMNRTIAVPAAAAAAAQAAISAAGYESTVMKAREQETVFE DRTPWKRYILALIIALGCEFFEVAADNGYITLDEFLVKGITLALAVLAIFMVGLTTFKKG IQSVMKGTLNMNTLMAVAVTGGVLIGAWPEAAMVLVLFEISEAIEQLSMTRARRSIRDLM SVAPEKALVAQGSGKYVEMKVESVGPGAQVRIAPGDRVPLDGKIVEGTTTLDQSMVTGES MPAEKGPGATVWAGTVNLTSTIEVTVTAAASQSLTARIIEAVENAQSSKSPVQRFVDKFA AVYTPIVFVVALCVAIVPPLFLGDWLGWLYKALCLLVIACPCALVISTPVTIVSALATAT RCGLLIKGGLFLEEARKLTNIGLDKTGTLTKGEPEVAGITLLGGADRKQVLSLAASLGAM NKHPLSAAIVREAKKEHAEIQPVADFTALPGEGVTGRIGTGRASLLNLAALDKRGLSSDE VADAFNRASENGMSSVALADTFGVLAVFVMADEIKADTRSGLAQLKAEGITPWLLTGDNE RAAHALAGKLGLENVNADLLPEAKLARIRELQGQGLTAMVGDGINDAPALAQADIGIAMG VRGTDSAIEAADIAVMDDRISSVATLVRLSRMTHSVLVQNIAFALGIKIIFTILAISGFA TMWMAVFADTGTCLIVVANGMRLMRVKPKLDRMAAEVDRAAGTAPQTHVQTAAA >gi|319804780|gb|ADMF01000023.1| GENE 12 13896 - 14366 292 156 aa, chain + ## HITS:1 COG:PA3689 KEGG:ns NR:ns ## COG: PA3689 COG0789 # Protein_GI_number: 15598885 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 137 1 135 156 108 49.0 4e-24 MRIRELAELTGNTPETIRYYEKQGLLPEPRRESNNYRQYGQIHVNRLDFIRHCRNLDIGL SEIRELLGALDEGSREGAELAHKLIHQHMEAVDRRLKDLRELRRHLLDLEAHCQGKHCDA RTCGILAELQQPEPDCPGHATALPGRRNSDASESLR >gi|319804780|gb|ADMF01000023.1| GENE 13 14441 - 14980 671 179 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGMGLMVLIPVLLALFFWVIGRVVPPARRPAGRPAGLGGLLCVVLLILSVKAALSLFELG RQAGEAANVLAVSIDFVGPVLKSLIPATVNAIAILLALFLLAFGRRRLTLFTALVCVWIA GPASDGLNAVILGVPYNMSSGFYGISFFTILVTLYLLFSERSANTYGLHGRTAPENPKA >gi|319804780|gb|ADMF01000023.1| GENE 14 15166 - 16317 1287 383 aa, chain + ## HITS:1 COG:no KEGG:VV2_1131 NR:ns ## KEGG: VV2_1131 # Name: not_defined # Def: isoaspartyl dipeptidase # Organism: V.vulnificus # Pathway: not_defined # 6 382 4 378 378 328 46.0 3e-88 MTQAVLIRNADLYAPEHVGMRDILIAGGKIIAVEPHLENVNIPGMGTVDAAGRRVTPGLI DQHIHVTGGGGEGGWASRCPELNFSSLVKGGVTSFMGVSGTDSMSRSIENLLAKVRGLTV EGASGWMWTSNYAYPPATITGSVKGDLFAIPECLGVKIAMGDHRSSFPTDQEVLRLLSEI RVAGMLTGKTGFLHVHCGDWGDAIFDPLEAAIPKGIPAKHMRPTHVARHPQVFERACRFA KMGGFIDITTGGGCWMGSAADALIAALEKDVPLDRITFSSDGQGSMPRFNEAGEMVGFGV GSIDCDLEAVRSTAEKIGLDKALRPMTATIADALGLAAKGRVQPGKDADLLIFGDELELA DVFMKGRRMMQDGKVIVKGAFEA >gi|319804780|gb|ADMF01000023.1| GENE 15 16872 - 17039 240 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEFVELVILLIAVLLIWFRPEHEKLAWRLTIVGWLMVVLMYVGHVSTSILGVLNL >gi|319804780|gb|ADMF01000023.1| GENE 16 17057 - 18592 1891 511 aa, chain + ## HITS:1 COG:Cj0017c_1 KEGG:ns NR:ns ## COG: Cj0017c_1 COG1495 # Protein_GI_number: 15791416 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Campylobacter jejuni # 12 137 3 128 132 187 65.0 5e-47 MVDYSKPITDGDIKKAKTWYDIVCWGGLLIVLLPVGIANLILGYLMGDSPCTLCWGQREQ MAFIGVVALFMVRYGFKPKYLATMLVMAAVGLWSSFRHLGNHAARDVGQGFGLEIMGLHT QMWAEIVFWCVVMLFGLALFLAPRFDALIAEFKGKRWRPTTGFMQIAFGIVSFILASNAF QAAWTTGLPPNWGQGDPWRFSWNPKYIVWSSDSWEGMFSGFNFLGKRDVKEPDFAYAPNA ERLGIKFEHNAANAPVALNGSLKIEETRAVPGISAKLNTIAKIRGEYVVASKYDFWFLNA DLSPKFHAAMDPWFSANVLDLVGITALDKDAYVLMGSNKSLLRVRQNPEADDVQGWPNFT AGRSHIEAVGGLGRARIDTERAKFSYIHSSATDGRYVFMATVPDNKNKKQFVISKALMKD WMLSGEFVPTAEMLKKDRSLGELYVTGMVYEDGKLYAVSKNWNVLVVIDVAQEAVVEAWG LPEELTDIRGLVKDGSTFEVIDANRVVKLTM >gi|319804780|gb|ADMF01000023.1| GENE 17 18935 - 19939 945 334 aa, chain + ## HITS:1 COG:RSc1559 KEGG:ns NR:ns ## COG: RSc1559 COG1295 # Protein_GI_number: 17546278 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 1 321 39 360 441 176 35.0 5e-44 MTLTTLLSLVPLLAVSLAAFAAFPSFSETRAALEEAVMSVLPLSYSEVIMKYLKVFSDHA SGLGAFGLAGLALTALLMIDKFFVTVNRIFRVRRMRSWAQRAMIYWALLTLGPIAIALSI TLSTQAIRIAAGAAGTGGLPGWLFALIQIILQTIGYAILFKLVPNCRVPFTHALTGGAAV ALAGQVFREAFEYYITAGTLSSIYGAFVAFPVFLLWFYIAWMLVFAGAAITATLPQLTSG RFADSYKLGNDFLTGLALLRELTSARASGSPCVSELALSRAVDSYPQGIERILVKLSEKG YCAPVVLDEKRRETGWALLCDPEKKRWPMPLPCC >gi|319804780|gb|ADMF01000023.1| GENE 18 19879 - 20169 182 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGAFVRSGEKTLADAFAVLLIDPCNGLVQPAQPNVNKPEGPLFAWYREFLRDPMIDQPVA ELIERLPVTDEKMPTEPRSHEPVLLADGRSSESRSA >gi|319804780|gb|ADMF01000023.1| GENE 19 20166 - 20351 138 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGPAATSAETIKSEEQSAALKAARAKFWVIKMLLNTIGGTLAHLRPYAAHFLLHANLASQ P >gi|319804780|gb|ADMF01000023.1| GENE 20 20263 - 21006 956 247 aa, chain + ## HITS:1 COG:STM1760 KEGG:ns NR:ns ## COG: STM1760 COG0790 # Protein_GI_number: 16765101 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Salmonella typhimurium LT2 # 45 227 299 483 509 73 32.0 2e-13 MTQNFARAALSAALCSSLLMVSALVAAGPIEDGVKLLEAQRYAEATKLFQKEAAKDNPRA MYYLGDMLNQGLGTHRQPLSATAWWEKGAYLGDVDCQLALASAYRAGLGVKLDPRQALIW DRVAAKHGSSEAMRNIGDYFAQGNGQEVDFKEAAKWYWRGANGGFPGAQRALAQLLMTGD GVDKDLAAAYVLMRAASQAQKNYAPDRNAAADARVLRHELSADQLAKAEKLTKESVLESL KALGAGD >gi|319804780|gb|ADMF01000023.1| GENE 21 21080 - 21778 766 232 aa, chain - ## HITS:1 COG:MA3902 KEGG:ns NR:ns ## COG: MA3902 COG4149 # Protein_GI_number: 20092698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 18 228 12 222 222 102 32.0 8e-22 MTESWLSALKSPELIFAVMLTAKTCLVAGAGFLVLAPPLAWLFARREGVGVRALSFFVTL PLVFPPVALGYLLLLLIGRSGPLGGMLDAVGISIVFTPWAVYLAAFIAGLPLVIRPIQGA LASEQLKALEFAARVHGAPPLTVYRKVTLPLVRGQILSGLLLGISRASGEVGITMMVGGN ISDRTNTLSLEIWNAVSRADFDVATTLCLLLSAFTLLIFIVLDRLQRRAGAL >gi|319804780|gb|ADMF01000023.1| GENE 22 21824 - 22558 937 244 aa, chain - ## HITS:1 COG:aq_1609 KEGG:ns NR:ns ## COG: aq_1609 COG0725 # Protein_GI_number: 15606725 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Aquifex aeolicus # 23 241 18 236 240 74 31.0 2e-13 MKLFTSTLITAALTLAGAAQAQVTVTTGGGYIKMVEALTAQYEKDTGAKVEKAFGGNIGQ MLAQVESGSPVTVVISDATSLKKFTKALNADAGVRLGDTPLILIWRKGLTLASPEDLTSD AVKRVAMPDPKAAVYGRAAKEYLDGSGLAEKIAGKLNVVSMVPQVMSYVSRAEMDAGFVN LLAARQGKDKIGGFVAVKEGYEPIRMTAQPVKGAAGEADDVKAFLTWLGSPKADAVLEKF GVSR >gi|319804780|gb|ADMF01000023.1| GENE 23 22574 - 23239 210 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 211 1 219 245 85 30 5e-16 MLKAQIRKRLGELSLSIDLSVAKGITVLRGESGSGKTTIANLLSGALKPDEGEIELEGRS VFSTARGINLAPEARGIGFVFQTARLLPHLSVEENIRFPQTAGRRRPRVDFAEVVEILGL ERLLHRHPGSLSGGEGQRVALARALMGTESLLILDEPLSSLDPERRSLLMGFIERAAQTL DVPILYITHSEEEMRRLARRAFLLQSGRLREMDLRTAASHN >gi|319804780|gb|ADMF01000023.1| GENE 24 23518 - 24372 999 284 aa, chain - ## HITS:1 COG:L66233 KEGG:ns NR:ns ## COG: L66233 COG0656 # Protein_GI_number: 15672250 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Lactococcus lactis # 7 284 4 281 281 277 50.0 1e-74 MHFQHATDAFTLKNGVKIPCIGFGTWQSADGPTAENAVREAIEAGYRHIDTAAIYRNERS VGRGIKDSGIKREDIFVTSKVWNTCRGYQTTLEAFEKTLSDLQLDYLDLYLIHWPASPSR FANWTELNLETWRALTELYKAGRIRAIGVSNFRPAHLEPLMQTEVQPMVNQIEYHPGYLQ REIVDYCRAHEILVEAWSPLGCGRVLTDPRLVALAERLGITTAQLALRFCLETGTLPLPK SVTPERIRANLNVFSFALPADVIAEIQAFPEFGFSGQDPDKVTF >gi|319804780|gb|ADMF01000023.1| GENE 25 24555 - 25337 1268 260 aa, chain - ## HITS:1 COG:RSc1744 KEGG:ns NR:ns ## COG: RSc1744 COG0760 # Protein_GI_number: 17546463 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Ralstonia solanacearum # 28 255 20 246 255 138 36.0 1e-32 MDKKAIALGAALLIAAGAANAELKAFKVNGETVSVAEQKAVYDRAVAQGQPAGPELESQV KNLLIQQTALLQEAKKAKIQQNADVQRAIDNARNQILIQGLAQDWAKKNPVSDADLQKAY EADKASYGDTEYQVRHILVKTEDQAKNLISRLAKGADFGKLAQEFSEDTANKAQGGLLGW VVPRSFVPAFGAAFSALKPGEVAQAPVRTQFGFHVVKLEAKRKAELYPSFDSQKAVIHNA LANQKVQQHFQELIKRAVVK >gi|319804780|gb|ADMF01000023.1| GENE 26 25441 - 26046 564 201 aa, chain - ## HITS:1 COG:RSc1746 KEGG:ns NR:ns ## COG: RSc1746 COG2917 # Protein_GI_number: 17546465 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Ralstonia solanacearum # 1 199 1 176 186 144 44.0 1e-34 MKFLFDIFPVILFFAAFKGAEYFPDGALSLASSFMGDGVTATTAPVFIATVTAILATILQ VGWLKLKGAKVEPMLWISLAVIVVFGGLTLWLKNEMFIKWKPTILYWIFAAVLGYGTYSG RSFIRMLMKDAVEMPDAAWMKLQWMWIVFFIVVGILNLVVAYLCSTDVWVNFKLFGLISL TLIFTIAAAVWMTKQAPGRQN >gi|319804780|gb|ADMF01000023.1| GENE 27 26465 - 29221 3483 918 aa, chain + ## HITS:1 COG:DR1598 KEGG:ns NR:ns ## COG: DR1598 COG0612 # Protein_GI_number: 15806606 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Deinococcus radiodurans # 42 903 80 948 951 577 37.0 1e-164 MHWINNVLFAAAVAAAAVGGGSAMAGEENKNMNELPTPYVTVEGITEYRLANGLKVVLYP DASKPTATVNMTYLVGSRQENYGETGMAHLLEHLMFKGSKNYPHPTAEFTRRGFRMNGST WLDRTNYFVSFNATDDNMKWAIGWQADAMVNSFIAQKDLDTEMTVVRNEYEMGENKPISV MMKRMQSVMFDWQSYGRSTIGARSDIENVEIKNLQAFYHLYYQPDNAVLTISGKFDRDQV LAWVNEAFGVIPKPTRVLPKEWTVEPTADGEREFFIRRKGEQQLVAVGYRIPSALADDYE ATAMAADILADAPTGRLYKALVDTGMASQVFGWPVAAAKPGFVMFGAMVKKGDPIEPVKK KLIEEIENAFARSGVTEEELNRQKADQEMMFERTLSDPEEFGVELSDYIALGDWRLFFVD REQVKNVTPAQIDAAAAKYFVRDNRVVGLFVPDDHPKRAEIAQAPSAEELISRFTFKETG AEVEAFDSSQDNIDKRTQIIEVGGVKTALLPKQTRGNTVVVKMRFNVGNNKELARSAIPM LSGAMLMRGTKTMTRDQIEDAFTANKMDGSPFSFTTDREHLAAALKLVGELFTQSSYPEK EFETLKSQTIAGLKARSDEPATLGRDAITKHFNTYPQGDARYSETSAELIADLEKVTLAD VKRYYNDVFGLGLGYIAVVGDFDAAEVTAELKADVIDQKAAKIPFERIVAEYRPVEPARF VIDTPDKENAMLFARVDLPANLSDADMPALITADWIIGGSDGLSNRIVNRLRQKEGLSYG SGSNITLPSFGNRAKWSVGAIVAPQNLAQAEKSLKDELARAYRDGITEAELAEAKRGIIG SRAVNRAQDGMVASNWVNNLETGRTWQFSKETEAAIEALTVEDVNKALRRFCDVSKLTFA LAGDLAKAKAAGKDFTQP >gi|319804780|gb|ADMF01000023.1| GENE 28 29297 - 29719 419 140 aa, chain + ## HITS:1 COG:SA0906 KEGG:ns NR:ns ## COG: SA0906 COG0454 # Protein_GI_number: 15926640 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Staphylococcus aureus N315 # 17 140 14 140 144 108 46.0 3e-24 MQIHIETGDWKTLQHPCERIRLMVFVAEQGVPKAEEIDDLDPVSTHFVAWDEHHMTLGCA RMTPDGKIGRLAVLKPFRGRGVGRVLMEAVLNYAKKEGLQTVRLNAQTHARTFYEALGFK AEGDVFEECGIPHIKMSAAL >gi|319804780|gb|ADMF01000023.1| GENE 29 29892 - 30773 626 293 aa, chain - ## HITS:1 COG:ZserB KEGG:ns NR:ns ## COG: ZserB COG0560 # Protein_GI_number: 15804959 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Escherichia coli O157:H7 EDL933 # 37 275 77 308 322 146 40.0 6e-35 MQDLLLVGPALQPSDFLDLCRAAKPESVLFHPETTALRIKAINAAAADQLEAQAQGKAVD CLRLSAELSIQNVRLIALDMDSTLIANECIDDMAAIAGCGPEMARLTREAMEGLWPFSKN LVERVRLLKGADAGIALQASENIRFSPGAQRLMRFMQAHRVDRWIISGGFSQIARPAAAK LGMTGVICNELVIEDGCLTGEVVGPAGGRILDADGKRRALEVLSSAAKAELCETIAVGDG ANDVQMIRAAGNGFAYHAKQAAAQAARLRINHAGLDAIAACYSEYWTDAQVLI >gi|319804780|gb|ADMF01000023.1| GENE 30 31094 - 32518 2128 474 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 26 467 42 483 484 396 50.0 1e-110 MKKILVAAAVMACFGTAGAAEDITVDVAVIGAGGAGLSAAVQAHELGANVVVVEKMAMVG GNTVRAAGGLNAVGTALQQAKGTKDSVEIMFYDTMKGGHWLNDPALVRTLVTKSASSVYW LLAHGGDLRDVGLMAGASQPRTHRPTGGALVGPEVVRTLYTAAKNLKIDVRTNTHAEQIL TDKSGRVVGLKVKGKDGTYTIHSKALVDAAGGFGANNEMVAKYVPRLKGFATTNHPGATG DGLLLAEKIGAQLIQMDQIQTHPTVVPNVGEMITEAVRGNGAVLINKEGKRFYNELETRD KVSAAILKQKDGVAYLFFDSDMQKSLKATNNYIKQKYCLNGATLDEVAGKMGVPADTLKA TMDAWKAGKAANKDAFGRADMPRDLDKGPFYAILVTPAVHHTMGGIKIDPLTQVYNTKGQ VIPGFFAAGEVTGGVHGGNRLGGNAQADIVTFGRIAGEQAYIFAKQLDAAQAKK >gi|319804780|gb|ADMF01000023.1| GENE 31 33036 - 33872 612 278 aa, chain + ## HITS:1 COG:mlr0689 KEGG:ns NR:ns ## COG: mlr0689 COG0758 # Protein_GI_number: 13470875 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Mesorhizobium loti # 39 227 81 254 377 111 42.0 1e-24 MSKLSPETFKALLALESAFGQVESVSELKAELSATFPDGARALRFGSEDYPSVLEDLADP PKVLCARGDLSLAERQLRVSIVGSRDASSDRCEAAELVAADLAARGAVIVSGLARGIDAA AHRGALSAWTPEKRAGRTIAVLGTPLSFPWPPENARLADEIAESGLILSECPQAEGRRFD PEARARSLKRRNRLVAALGTGTLVMAARPGSSTLIEVQAALAIGRPVILWQACTQESWAE DLLKNAPKDAEGRSLVAAAGSAREVEALLSPWARVWWL >gi|319804780|gb|ADMF01000023.1| GENE 32 34016 - 34360 466 114 aa, chain - ## HITS:1 COG:no KEGG:Sputcn32_3388 NR:ns ## KEGG: Sputcn32_3388 # Name: not_defined # Def: hypothetical protein # Organism: S.putrefaciens # Pathway: not_defined # 16 114 15 116 116 86 47.0 2e-16 MNRTLTALCLAAALAFAGTASAGEKLAEQHIAKGLQCQTCHGPDMKNPQMPEMATCTGCH NVDQLVEKTKNVKPVNPHVSPHYGKTLECTNCHLMHQESENYCNQCHEFNFKVP >gi|319804780|gb|ADMF01000023.1| GENE 33 34649 - 36199 2233 516 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 13 515 28 496 502 177 30.0 5e-44 MSEMNLCRRNLLKAGAAAAAGIMASAAANAGIPAAKVEKYDEEYDVVIIGSGFAGMACAL KAGRAGKKVLMLEKMPVVGGNSAICGGNVACPVNPVQKAQGIKDSRELFIADCLKDGLGL NHVELLSKIVDRCNDTIKFVEDCGAEFVPNHMLFEGGHSVPRSYEIKAGTGSGYIHPMYD QIKKLSNVTVKTRAKFDDFIMDGDAVVGVTYREGYRFNAKLQSDDLENKTGKTKTVRAKL GVMLAAGGFSRDIWFRQIQDPRVVPTTDSTNQLGATAGVLVKSLGIGAAPVQLCWLQFLP YTNPREKGFGVSVNFTNHACMDFGIVVDRKTGKRFMDEHAGRKIKSDALFNVIGKDENYP IAIASEEIVKAINPSFVKLPIEMGTVKKFNTLEELADHFKINKAPFLEQVERFNGFVAKQ EDPEFHRILKFQNGLNLAKGPYYGIEVAPKIHHTMGGVMINPDSQVISATTHAPIKGLYA GGEITGGVHGASRLGTVAVIDALTFGMIAGEHFAAM >gi|319804780|gb|ADMF01000023.1| GENE 34 36751 - 38634 1480 627 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 46 576 47 553 592 103 24.0 7e-22 MHFREDTGIEGVSRLEASTTIGPDDFVFAVEETDRNESYIRMLASLAEGLRVAFPDRRTH IRQIPSRGFIDVVRAEKIPFVFATAGTMVALVNESGAVPLAARERLNTHAEESSQSAAGG LLVVDAKRRDLGSLESLEGARIAVESSVAFGPWQWLAGRLLADHHDPRKFFSEAVWRPHD VPEVLNAVLSGRADAGLISVCTFEALAAEGMIDPKAFRPAAVLERTPGACLSSTPLYPDW TLGYMAWADGNQVRRVAAVAFSLPENDGWRWGLRVDLSSVRSLMEALHFGPYSYLDEQTV AGFMKSHAEWFAALVAVFLFVLFHALRSRYLVRVKTQALRTALEEKERMENEARVSREQL SAIERAGMLSQMSSMFAHELKQPLSSLSNYVGGLKLWNAHRQTNDADRALADDALSAMAE EANRITAIVNRVRGYAKASTEPLKPTDWTAVVRRAELIVERHDARRVPIYTAPGQYLAAD PEDDRPAWVLGDALELELLVLNFIRNAAHAAQKNPKGFVSVSLAREGDNYVLHVTDNGPK LSPEGFARLTGYGDSVKQEGMGIGLSICRGIADRHGGQLKFYQLPTEGICAEAVIEAAEP PEGTHETDKGSSQSSSAAAEKGNGGVQ >gi|319804780|gb|ADMF01000023.1| GENE 35 38631 - 39281 493 216 aa, chain + ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 204 8 210 218 139 41.0 4e-33 MTKALDTPLVRIVDDDAEQLKSLAFLLRMGGWEVMTYQSAAAFLEMDDPRRSGCLLLDHR MPNMTGMELHETLVERGSLLPVIFLSAHGDIPMAMQAVHRGAMDFLVKPAAPEVLLAAVE KAVKKNLADIAAEAGQVDLAQKAALLTERELEVARLVAQGLLNKQIADRLSISLPTVKLH RGNAARKLGVRSAVAMAKALEMAGLLAETGKAGGSS >gi|319804780|gb|ADMF01000023.1| GENE 36 39278 - 40759 1228 493 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 20 487 20 480 484 209 32.0 1e-53 MTISRRKLVGAAGLLPPFAAALTLSSAVKASEPETSDAESCSVAVIGAGAAGLAAAIAAK EAGAVRVVVLEKTALAGGHMMVSSGMLNAVDPEGQKRSGRTDSVEHFFRDTYEGGGGLGD PDLIATMVRSSADVFAWLKSLGVEFDPTLYEAYTGVYPRAHRTIQARSGMAYSRALMRRA RKLGVEVRYRQRVEALVMHNGRVLGLELTDMDADSPQHKTLMAKSVVIASGGFGANRLMR ARWAPWISMDLGTTYSPGRIEEDPATGDGIRMAEAAGAGLVGMEYVLAIPFWGGRVLDYP GAEIFLTARGERFTDETASWDTVLADLTAAGGSDFWVITDSRSRKGSTFATKVQQGLVES AASLKELAKKMNISSAQLSEVFARYNEAARTGTDPDFGRTRFLQELKEPPFYFGRERFEV HYTCGGIAINPKAEVLYAGSQKRPVLGLYAAGEVTGGVHGKFRLGGSGLLDAFVFGRIAG RNAAQTSLIDAMR >gi|319804780|gb|ADMF01000023.1| GENE 37 40810 - 41577 645 255 aa, chain + ## HITS:1 COG:PH1936 KEGG:ns NR:ns ## COG: PH1936 COG1011 # Protein_GI_number: 14591678 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Pyrococcus horikoshii # 9 207 6 186 217 76 31.0 5e-14 MFYERSCFIFDLDGTLIDSLGVWSQVDQELMRRLSNGRVMLSEDEAGTLRIRAMKTYGEG SDAYFKYMADLKRAFDLPGTPEEIHFQRYSLAQEFLRTRVHYREGAAELIKYLKALGKKL AIVTTTRRRNIDVYASQNESMIAAAPLSEIMDLIVTRDDVAHVKPDPEGFYKVLDALKAE PGECIMVEDALPGIRGAKAAGIDSVVIEERHNADDRVQLEAAALARFASPAALLKEIQAE IEAAAGGIHCMRSSS >gi|319804780|gb|ADMF01000023.1| GENE 38 42135 - 42686 523 183 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTQEDPNNSMQTHPPEEALSGALSIRPSLADPTAAAELFGCAASDFLHAVYGQHAGMESE GESDERIAAIVFGLAALFEDQSGIVELPAGFSTAKAGARLRQQLSRRLNAMSAEDRKLFD DDAQIVTLAVNVFFEELLMMADAWFQTTDREPDEAAFHDFLSQETLHAWMLGWAEKILGI KAR >gi|319804780|gb|ADMF01000023.1| GENE 39 42716 - 43288 496 190 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEKTLINQAVKNAVGQESCENTSVQEAEKTDPAALSAREFEDFLASIVTGVIQNVVDVRA GKLKPDEASSRDDATVRTLAQILMGEHERIRLMLAPGTPKPGPELVAAMKANLPALFRDL PQGVDAGNPRALMVHASRVFLREIYTMLKAAAAEGGELTPERLKVRIERTAFVWGERFLG DTLNETEGMR >gi|319804780|gb|ADMF01000023.1| GENE 40 43423 - 43815 389 130 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKRLSMLRTGEMTPEELDAANEKLVFWLASIFSGENRHFETVDEWHPYGLSDELERIFG DHLSIEGGQGDDRTIARAARLFVREGEAMLTEALEAGLPASSAAETEPAVIFAARWANLF AGQLAEWPED >gi|319804780|gb|ADMF01000023.1| GENE 41 43818 - 44129 412 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302861030|gb|EFL84105.1| ## NR: gi|302861030|gb|EFL84105.1| hypothetical protein HMPREF0189_01468 [Burkholderiales bacterium 1_1_47] # 19 99 6 86 87 75 44.0 9e-13 MSGELDPRLKAELENRLREEALGRIFRGLSPEAMRTLRAVSEMRNRSPQDVLRDELEGYI LEKLPPVDVEGIIQSMGSKFYQLGWMCGKAKNFIRAWNRSRED >gi|319804780|gb|ADMF01000023.1| GENE 42 44158 - 44304 76 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCWGPARLGLCSLGCHGMGRSFSQFTGIGLGFSKADAPSAGIVTVASP >gi|319804780|gb|ADMF01000023.1| GENE 43 44309 - 44614 442 101 aa, chain - ## HITS:1 COG:no KEGG:BDI_1714 NR:ns ## KEGG: BDI_1714 # Name: not_defined # Def: putative permease # Organism: P.distasonis # Pathway: not_defined # 1 71 45 115 115 93 70.0 3e-18 MYILQIQSLEKISAFTVNLTYNLEPIYSIILAMILFGEAKDLGLSFYIGLAFIALSVGLQ TWSVMRIQKRVAALDKLTAEDSDKKPHPVFIEPIGSRKERE >gi|319804780|gb|ADMF01000023.1| GENE 44 44732 - 45049 290 105 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 3 98 471 564 570 74 36.0 9e-13 MTSVRGKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMT LKQLLDWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD Prediction of potential genes in microbial genomes Time: Sun May 29 19:50:14 2011 Seq name: gi|319804635|gb|ADMF01000024.1| Sutterella wadsworthensis 3_1_45B cont1.24, whole genome shotgun sequence Length of sequence - 166293 bp Number of predicted genes - 143, with homology - 127 Number of transcription units - 67, operones - 32 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 99 - 416 290 ## Ppha_1041 transposase IS4 family protein 2 1 Op 2 . + CDS 450 - 845 129 ## COG1484 DNA replication protein - Term 965 - 1024 9.2 3 2 Tu 1 . - CDS 1137 - 1607 400 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 1637 - 1696 2.0 + Prom 1596 - 1655 3.6 4 3 Op 1 . + CDS 1791 - 2210 487 ## COG2913 Small protein A (tmRNA-binding) 5 3 Op 2 . + CDS 2214 - 2429 180 ## 6 3 Op 3 . + CDS 2454 - 2843 442 ## + Term 2856 - 2891 8.1 + Prom 2901 - 2960 3.7 7 4 Op 1 . + CDS 3207 - 3719 411 ## COG2947 Uncharacterized conserved protein 8 4 Op 2 . + CDS 3754 - 4569 965 ## COG0730 Predicted permeases + Term 4596 - 4654 16.3 - Term 4592 - 4633 10.4 9 5 Tu 1 . - CDS 4660 - 5451 606 ## COG0682 Prolipoprotein diacylglyceryltransferase - Prom 5480 - 5539 3.0 + Prom 5427 - 5486 2.5 10 6 Op 1 6/0.083 + CDS 5628 - 6431 757 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 11 6 Op 2 . + CDS 6428 - 7078 454 ## COG0352 Thiamine monophosphate synthase 12 6 Op 3 . + CDS 7089 - 8768 896 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 13 6 Op 4 . + CDS 8765 - 10153 603 ## CAP2UW1_0180 hypothetical protein 14 6 Op 5 . + CDS 10207 - 11673 1230 ## CAP2UW1_0179 GTP-binding protein HSR1-related 15 7 Tu 1 . - CDS 11689 - 13710 160 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 13836 - 13895 5.9 - Term 13889 - 13936 -0.9 16 8 Op 1 31/0.000 - CDS 13972 - 14904 1111 ## COG0341 Preprotein translocase subunit SecF 17 8 Op 2 25/0.000 - CDS 14923 - 16818 2149 ## COG0342 Preprotein translocase subunit SecD - Term 16940 - 16988 5.7 18 8 Op 3 15/0.000 - CDS 16995 - 17342 428 ## COG1862 Preprotein translocase subunit YajC - Prom 17407 - 17466 3.1 19 8 Op 4 17/0.000 - CDS 17470 - 18603 1282 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 20 8 Op 5 . - CDS 18627 - 19676 846 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) - Prom 19714 - 19773 6.4 + Prom 19706 - 19765 3.0 21 9 Op 1 1/0.208 + CDS 19787 - 20347 658 ## COG3028 Uncharacterized protein conserved in bacteria 22 9 Op 2 . + CDS 20378 - 21799 1569 ## COG0521 Molybdopterin biosynthesis enzymes + Term 21816 - 21865 13.6 - Term 21803 - 21853 13.0 23 10 Op 1 . - CDS 21878 - 22393 343 ## 24 10 Op 2 . - CDS 22397 - 22867 560 ## - Prom 22988 - 23047 2.8 - TRNA 23356 - 23439 69.2 # Leu CAA 0 0 - Term 23307 - 23349 10.1 25 11 Op 1 7/0.083 - CDS 23462 - 23956 207 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 26 11 Op 2 1/0.208 - CDS 23956 - 25410 1196 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 27 11 Op 3 3/0.125 - CDS 25427 - 26113 514 ## COG0560 Phosphoserine phosphatase 28 11 Op 4 . - CDS 26121 - 26861 675 ## COG0593 ATPase involved in DNA replication initiation - Prom 26915 - 26974 2.0 + Prom 26994 - 27053 3.7 29 12 Tu 1 . + CDS 27165 - 28193 1063 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase + Term 28223 - 28273 16.0 - Term 28216 - 28255 8.5 30 13 Op 1 12/0.042 - CDS 28274 - 29311 655 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 31 13 Op 2 . - CDS 29236 - 31263 1361 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) - Prom 31480 - 31539 2.2 + Prom 31345 - 31404 3.8 32 14 Tu 1 . + CDS 31490 - 32155 748 ## COG0586 Uncharacterized membrane-associated protein + Term 32185 - 32228 12.5 + Prom 32280 - 32339 4.2 33 15 Tu 1 . + CDS 32370 - 34790 2496 ## COG0855 Polyphosphate kinase + Term 34808 - 34854 10.2 - Term 34798 - 34839 10.5 34 16 Op 1 . - CDS 34863 - 36116 1378 ## COG2195 Di- and tripeptidases 35 16 Op 2 26/0.000 - CDS 36263 - 37465 1344 ## COG0126 3-phosphoglycerate kinase - Term 37482 - 37531 2.2 36 16 Op 3 5/0.125 - CDS 37633 - 38643 1246 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 37 16 Op 4 . - CDS 38696 - 40705 2052 ## COG0021 Transketolase - Prom 40782 - 40841 6.9 + Prom 40747 - 40806 2.8 38 17 Tu 1 . + CDS 40917 - 41666 639 ## COG1385 Uncharacterized protein conserved in bacteria - Term 41669 - 41715 -0.9 39 18 Tu 1 . - CDS 41743 - 42642 838 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 40 19 Tu 1 . + CDS 43197 - 43484 360 ## + Term 43520 - 43551 1.1 - Term 43505 - 43539 3.0 41 20 Tu 1 . - CDS 43554 - 45098 1671 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 45176 - 45235 1.6 - Term 45280 - 45320 7.3 42 21 Op 1 . - CDS 45345 - 47369 2135 ## COG0557 Exoribonuclease R 43 21 Op 2 1/0.208 - CDS 47453 - 48082 340 ## COG3150 Predicted esterase 44 21 Op 3 . - CDS 48085 - 49467 1352 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Prom 49523 - 49582 2.3 45 22 Tu 1 . + CDS 49612 - 50214 605 ## + Term 50414 - 50451 -0.3 + Prom 50360 - 50419 3.2 46 23 Op 1 27/0.000 + CDS 50568 - 51041 503 ## COG0511 Biotin carboxyl carrier protein 47 23 Op 2 3/0.125 + CDS 51061 - 52422 1421 ## COG0439 Biotin carboxylase + Term 52453 - 52497 5.1 48 24 Op 1 . + CDS 52521 - 53417 777 ## PROTEIN SUPPORTED gi|33603362|ref|NP_890922.1| ribosomal protein L11 methyltransferase 49 24 Op 2 . + CDS 53460 - 54302 777 ## + Term 54324 - 54365 8.1 + Prom 54313 - 54372 2.2 50 25 Tu 1 . + CDS 54395 - 55354 776 ## COG0524 Sugar kinases, ribokinase family 51 26 Op 1 . - CDS 55364 - 55912 492 ## COG0762 Predicted integral membrane protein - Prom 55932 - 55991 3.6 52 26 Op 2 . - CDS 56002 - 56718 446 ## COG3023 Negative regulator of beta-lactamase expression 53 26 Op 3 . - CDS 56694 - 56960 125 ## 54 26 Op 4 . - CDS 56970 - 57782 960 ## COG4137 ABC-type uncharacterized transport system, permease component + Prom 57798 - 57857 3.3 55 27 Op 1 . + CDS 58056 - 59477 1793 ## COG0541 Signal recognition particle GTPase 56 27 Op 2 14/0.000 + CDS 59506 - 60111 480 ## COG0817 Holliday junction resolvasome, endonuclease subunit 57 27 Op 3 29/0.000 + CDS 60108 - 60689 770 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 58 27 Op 4 . + CDS 60763 - 61815 1070 ## COG2255 Holliday junction resolvasome, helicase subunit - Term 61768 - 61803 1.2 59 28 Tu 1 . - CDS 61944 - 62378 301 ## - Term 62402 - 62449 7.0 60 29 Tu 1 . - CDS 62621 - 66907 5115 ## Ent638_0501 outer membrane autotransporter 61 30 Tu 1 . + CDS 67122 - 67622 -20 ## - Term 67832 - 67878 0.5 62 31 Op 1 . - CDS 67955 - 68755 443 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 63 31 Op 2 44/0.000 - CDS 68767 - 69846 703 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 64 31 Op 3 49/0.000 - CDS 69806 - 71230 1172 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 65 31 Op 4 38/0.000 - CDS 71279 - 72256 1230 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 66 31 Op 5 . - CDS 72256 - 74517 1839 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 74581 - 74640 2.1 + Prom 74709 - 74768 2.5 67 32 Op 1 13/0.000 + CDS 74849 - 75274 508 ## COG0824 Predicted thioesterase 68 32 Op 2 30/0.000 + CDS 75310 - 75981 955 ## COG0811 Biopolymer transport proteins 69 32 Op 3 . + CDS 75999 - 76430 450 ## COG0848 Biopolymer transport protein 70 32 Op 4 . + CDS 76453 - 77715 1464 ## COG3468 Type V secretory pathway, adhesin AidA + Term 77746 - 77788 10.1 - Term 77730 - 77780 16.0 71 33 Op 1 . - CDS 77833 - 79581 1985 ## COG0442 Prolyl-tRNA synthetase - Prom 79639 - 79698 4.0 - Term 79626 - 79671 -0.6 72 33 Op 2 7/0.083 - CDS 79707 - 80834 1180 ## COG0263 Glutamate 5-kinase - Term 80858 - 80895 -0.7 73 33 Op 3 14/0.000 - CDS 80923 - 82020 891 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 - Prom 82055 - 82114 3.5 - Term 82061 - 82099 6.0 74 33 Op 4 32/0.000 - CDS 82178 - 82441 332 ## PROTEIN SUPPORTED gi|226946115|ref|YP_002801188.1| ribosomal protein L27 75 33 Op 5 . - CDS 82480 - 82791 328 ## PROTEIN SUPPORTED gi|53803715|ref|YP_114664.1| ribosomal protein L21 - Prom 82923 - 82982 2.9 + Prom 82995 - 83054 4.4 76 34 Tu 1 . + CDS 83120 - 84118 884 ## COG0142 Geranylgeranyl pyrophosphate synthase + Term 84161 - 84228 30.2 + TRNA 84139 - 84215 83.4 # Pro CGG 0 0 + Prom 84141 - 84200 79.8 77 35 Op 1 . + CDS 84296 - 84922 499 ## COG0237 Dephospho-CoA kinase + Term 84985 - 85017 4.0 78 35 Op 2 . + CDS 85040 - 85807 616 ## COG4582 Uncharacterized protein conserved in bacteria 79 35 Op 3 . + CDS 85880 - 86134 191 ## Maqu_2688 hypothetical protein - Term 86098 - 86133 8.1 80 36 Tu 1 . - CDS 86171 - 86896 804 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 81 37 Tu 1 . - CDS 87003 - 87800 571 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 82 38 Tu 1 . - CDS 87920 - 89068 445 ## - Prom 89092 - 89151 4.2 83 39 Tu 1 . - CDS 89200 - 91995 3083 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 92023 - 92082 2.0 + Prom 92036 - 92095 2.6 84 40 Tu 1 . + CDS 92340 - 94718 1748 ## + Term 94722 - 94762 0.1 - Term 94708 - 94750 3.0 85 41 Op 1 11/0.042 - CDS 94779 - 95726 851 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase 86 41 Op 2 35/0.000 - CDS 95740 - 96897 1287 ## COG0206 Cell division GTPase 87 41 Op 3 25/0.000 - CDS 96974 - 98212 1134 ## COG0849 Actin-like ATPase involved in cell division 88 41 Op 4 18/0.000 - CDS 98284 - 99465 621 ## COG1589 Cell division septal protein 89 41 Op 5 11/0.042 - CDS 99489 - 100448 1013 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 90 41 Op 6 26/0.000 - CDS 100474 - 101871 1201 ## COG0773 UDP-N-acetylmuramate-alanine ligase 91 41 Op 7 31/0.000 - CDS 101913 - 103049 936 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 92 41 Op 8 25/0.000 - CDS 103046 - 104218 1059 ## COG0772 Bacterial cell division membrane protein 93 41 Op 9 28/0.000 - CDS 104239 - 105765 1390 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase - Term 105775 - 105803 -1.0 94 41 Op 10 28/0.000 - CDS 105813 - 106949 1340 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 95 41 Op 11 26/0.000 - CDS 107001 - 108422 1173 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 96 41 Op 12 26/0.000 - CDS 108508 - 110040 1307 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 97 41 Op 13 . - CDS 110074 - 111888 1667 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 98 41 Op 14 . - CDS 111885 - 112307 302 ## 99 41 Op 15 29/0.000 - CDS 112311 - 113258 647 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 100 41 Op 16 . - CDS 113370 - 113786 470 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 113885 - 113944 2.8 101 42 Tu 1 . - CDS 113960 - 114148 113 ## + Prom 114453 - 114512 1.6 102 43 Tu 1 . + CDS 114665 - 115834 1472 ## plu2784 palmitoyl transferase + Term 115867 - 115904 6.3 + Prom 115886 - 115945 3.9 103 44 Op 1 . + CDS 116087 - 117370 1503 ## COG0001 Glutamate-1-semialdehyde aminotransferase 104 44 Op 2 . + CDS 117484 - 119736 1566 ## COG4232 Thiol:disulfide interchange protein + Term 119790 - 119836 11.1 - Term 119769 - 119830 3.3 105 45 Tu 1 . - CDS 119832 - 121463 951 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) - Prom 121484 - 121543 3.2 106 46 Op 1 41/0.000 + CDS 121679 - 121966 579 ## COG0234 Co-chaperonin GroES (HSP10) 107 46 Op 2 . + CDS 122022 - 123659 2025 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 123734 - 123774 12.1 - Term 123775 - 123813 7.1 108 47 Tu 1 . - CDS 123834 - 124466 606 ## gi|302860694|gb|EFL83771.1| hypothetical protein HMPREF0189_00849 - Prom 124604 - 124663 3.4 + Prom 124722 - 124781 3.6 109 48 Tu 1 . + CDS 124818 - 125639 1056 ## COG0284 Orotidine-5'-phosphate decarboxylase + Term 125661 - 125702 11.2 110 49 Tu 1 . - CDS 125658 - 126083 410 ## COG4925 Uncharacterized conserved protein - Prom 126152 - 126211 2.2 - Term 126172 - 126217 8.0 111 50 Op 1 . - CDS 126241 - 127503 1014 ## - Prom 127534 - 127593 3.8 112 50 Op 2 . - CDS 127618 - 129045 1313 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 129136 - 129195 7.0 - Term 129064 - 129103 7.1 113 51 Op 1 2/0.208 - CDS 129212 - 129754 497 ## COG1546 Uncharacterized protein (competence- and mitomycin-induced) 114 51 Op 2 12/0.042 - CDS 129784 - 130311 325 ## COG1267 Phosphatidylglycerophosphatase A and related proteins - Term 130320 - 130360 2.1 115 51 Op 3 11/0.042 - CDS 130371 - 131378 732 ## COG0611 Thiamine monophosphate kinase - Term 131559 - 131601 6.5 116 52 Op 1 17/0.000 - CDS 131633 - 132154 603 ## COG0781 Transcription termination factor - Prom 132232 - 132291 2.5 - Term 132234 - 132279 6.5 117 52 Op 2 . - CDS 132303 - 132794 651 ## COG0054 Riboflavin synthase beta-chain - Prom 132890 - 132949 3.5 118 53 Tu 1 . + CDS 133244 - 135007 2259 ## COG1785 Alkaline phosphatase + Term 135057 - 135097 6.2 + Prom 135043 - 135102 1.6 119 54 Op 1 . + CDS 135126 - 135578 381 ## RHECIAT_CH0004388 hypothetical protein 120 54 Op 2 36/0.000 + CDS 135660 - 136433 214 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 121 54 Op 3 . + CDS 136447 - 137736 816 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 137768 - 137814 7.4 - Term 137756 - 137802 8.2 122 55 Tu 1 . - CDS 137832 - 138923 1008 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family - Term 138989 - 139029 4.5 123 56 Op 1 16/0.000 - CDS 139049 - 139666 850 ## COG0307 Riboflavin synthase alpha chain 124 56 Op 2 14/0.000 - CDS 139670 - 140917 744 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 125 56 Op 3 . - CDS 140917 - 141546 548 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 141577 - 141636 2.8 126 57 Tu 1 . + CDS 141581 - 141739 72 ## - Term 141656 - 141707 14.2 127 58 Op 1 . - CDS 141764 - 143029 1466 ## COG0112 Glycine/serine hydroxymethyltransferase - Prom 143135 - 143194 2.2 - Term 143060 - 143101 2.4 128 58 Op 2 . - CDS 143211 - 143813 551 ## COG1881 Phospholipid-binding protein 129 58 Op 3 1/0.208 - CDS 143888 - 144343 323 ## COG1490 D-Tyr-tRNAtyr deacylase 130 58 Op 4 . - CDS 144343 - 145608 354 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 145813 - 145872 2.7 + Prom 145801 - 145860 3.6 131 59 Op 1 1/0.208 + CDS 145903 - 147483 1114 ## COG0739 Membrane proteins related to metalloendopeptidases 132 59 Op 2 . + CDS 147480 - 148616 520 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases + Term 148642 - 148679 6.0 - Term 148629 - 148667 7.0 133 60 Tu 1 . - CDS 148718 - 149110 592 ## COG0316 Uncharacterized conserved protein - Prom 149212 - 149271 2.9 - Term 149283 - 149330 7.7 134 61 Op 1 59/0.000 - CDS 149403 - 149795 554 ## PROTEIN SUPPORTED gi|152980472|ref|YP_001351985.1| small subunit ribosomal protein S9 135 61 Op 2 . - CDS 149811 - 150239 599 ## PROTEIN SUPPORTED gi|94309355|ref|YP_582565.1| 50S ribosomal protein L13 - Term 150369 - 150407 3.5 136 62 Tu 1 . - CDS 150559 - 151161 492 ## COG2095 Multiple antibiotic transporter - Term 151189 - 151229 4.0 137 63 Op 1 5/0.125 - CDS 151286 - 153238 1564 ## COG0578 Glycerol-3-phosphate dehydrogenase 138 63 Op 2 . - CDS 153240 - 154733 997 ## COG0554 Glycerol kinase - Prom 154802 - 154861 1.6 - Term 154738 - 154783 11.1 139 64 Tu 1 . - CDS 154915 - 155631 787 ## BB0209 putative ATP-dependent RNA helicase - Prom 155674 - 155733 2.8 140 65 Tu 1 . + CDS 156307 - 156606 375 ## gi|302859045|gb|EFL82129.1| ribosomal subunit interface protein domain/'Cold-shock' DNA-binding domain protein + Term 156650 - 156702 12.6 - TRNA 156769 - 156844 54.7 # Glu TTC 0 0 - TRNA 156855 - 156930 86.4 # Ala GGC 0 0 - TRNA 156971 - 157046 54.7 # Glu TTC 0 0 - TRNA 157055 - 157130 86.4 # Ala GGC 0 0 - TRNA 157211 - 157286 54.7 # Glu TTC 0 0 - TRNA 157297 - 157372 86.4 # Ala GGC 0 0 + Prom 157391 - 157450 5.3 141 66 Tu 1 . + CDS 157551 - 163280 3041 ## COG0178 Excinuclease ATPase subunit - Term 163292 - 163326 4.1 142 67 Op 1 22/0.000 - CDS 163345 - 164478 961 ## COG0795 Predicted permeases 143 67 Op 2 . - CDS 164475 - 165614 787 ## COG0795 Predicted permeases - Prom 165692 - 165751 3.7 - 5S_RRNA 165852 - 165923 94.0 # LTTRR5S [D:1..117] # 5S ribosomal RNA # Leptothrix discophora # Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix. Predicted protein(s) >gi|319804635|gb|ADMF01000024.1| GENE 1 99 - 416 290 105 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 3 98 471 564 570 74 36.0 9e-13 MTSVRGKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMT LKQLLDWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD >gi|319804635|gb|ADMF01000024.1| GENE 2 450 - 845 129 131 aa, chain + ## HITS:1 COG:MA2079 KEGG:ns NR:ns ## COG: MA2079 COG1484 # Protein_GI_number: 20090925 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Methanosarcina acetivorans str.C2A # 1 58 189 246 257 72 51.0 3e-13 MSWRYETKSTIITTNRPIAEWGLVLGDPMAATAIIDRLMQHCTAIAINGDSYRLKEHKLK NCLTDNLQAAKELKPEWHNCRGQDLSTRGSTYLTVDIQESLRRADGTVREEPTGVGLTSK SRLLLFGTQML >gi|319804635|gb|ADMF01000024.1| GENE 3 1137 - 1607 400 156 aa, chain - ## HITS:1 COG:NMA0064 KEGG:ns NR:ns ## COG: NMA0064 COG0735 # Protein_GI_number: 15793093 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Neisseria meningitidis Z2491 # 10 152 8 144 144 162 58.0 3e-40 MKENQQQQSADLKTMGLKVTVPRLKILDLFQKLSESHEAGKRHLSAEEVYKLLLEENSDI GLATVYRVLTQFENAGILVRRHFDEGRATYELQEGRHHDHLVCVRCGNVEEFVDPEIERA QRQVAARKGYELTDHSLVLYGICGDCRKKEQKNDEI >gi|319804635|gb|ADMF01000024.1| GENE 4 1791 - 2210 487 139 aa, chain + ## HITS:1 COG:RSc2746 KEGG:ns NR:ns ## COG: RSc2746 COG2913 # Protein_GI_number: 17547465 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Ralstonia solanacearum # 2 99 41 139 219 87 46.0 6e-18 MDTATSYVPYILKPYRADVHQGNLVTSEMALQLEKGMTDAQVQFLLGVPLIKDPFHENRW DYTYYLRRGNGEEQVRSLTVFFNEDRRVDHWTSDPLPDEQQADQLILGTIDTFEPRLPKT DIPAAAPKTSTEPSPSSAE >gi|319804635|gb|ADMF01000024.1| GENE 5 2214 - 2429 180 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPTIQQEVERLRSLVTQLINRLQNERDQRQQLAHQLEVRDAELKRARQQLHEMKKKVDEM LSQFRDAGSAS >gi|319804635|gb|ADMF01000024.1| GENE 6 2454 - 2843 442 129 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSEVNVTIFDRNYRLAVTTGEEKMLEDCARQVNEQMLAVRAAGRVIAIDQIAVLTALELA YDAKKREHDAKKTAAAPPQPVQQQTPAAAVPTAASTPNEADSALFAEIHSLCSLCEEALF RDAKMGSLF >gi|319804635|gb|ADMF01000024.1| GENE 7 3207 - 3719 411 170 aa, chain + ## HITS:1 COG:RSc2403 KEGG:ns NR:ns ## COG: RSc2403 COG2947 # Protein_GI_number: 17547122 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 5 165 5 163 168 171 53.0 6e-43 MAIDPKTAAVCAEASGFWLMKTEPSECSIDDAFAATNHAVSWFGVRNYQARNFMRDQMKV GDAVLFYHSSCPNPGIVGIARIASKPYPDTCQFDEKSDYFDPKSTKDAPRWVAVDVEALV KFPVIPVSILRAQPELADMLILRRGNRLSITPVEKKDFLFIVEHLAKPQS >gi|319804635|gb|ADMF01000024.1| GENE 8 3754 - 4569 965 271 aa, chain + ## HITS:1 COG:PA0340 KEGG:ns NR:ns ## COG: PA0340 COG0730 # Protein_GI_number: 15595537 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 12 257 9 252 267 176 44.0 5e-44 MEIQIILALAALGCCTGFLAGLLGIGGGMVLTPFLTLLLGYAGIPIEHIVHVAIATSMGT ILFTSLSSVRAHAKRGAVLWNVVFSMAPGILVGAVVGAQVSGALPTFWVALIFAVFVYTS AAKMFLNAKPTPSRHLPGPAGMFGAGTAIGVISALVGAGGGFISVPFMTWCNVKMHNAVG TSAAFGFPIAFAGTIGYIISGWHLTGLPGWPYTIGYIHLPALVCVAATSIFFAPFGAKVA HSIDTKPLKRIFASVLFLLATYMLYKAISAF >gi|319804635|gb|ADMF01000024.1| GENE 9 4660 - 5451 606 263 aa, chain - ## HITS:1 COG:RSc2410 KEGG:ns NR:ns ## COG: RSc2410 COG0682 # Protein_GI_number: 17547129 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Ralstonia solanacearum # 1 261 1 289 303 283 53.0 3e-76 MLIHPQFDPIAFSIGPLGVHWYGLMYLLGFLAFWLLGRRRAQDYWRGVTPDDVENLLFWG VFGVVLGGRLGYCLFYQPAWYLTHPLQIFSVWQGGMSAHGGLLGVLIVMALYVRRHGMRF WQLTDFVAPLVPLGLFFGRIGNFINGELWGRPASPDLPWAMIFPQAQDGGISRHPSQLYE AGLEGLALFVVIWLYSRKPRPVGRTAALFALGYGAARFVSEYFREPDAFLGLQALGLSRG QWLTLPLILAGLTLWVWAGRRRT >gi|319804635|gb|ADMF01000024.1| GENE 10 5628 - 6431 757 267 aa, chain + ## HITS:1 COG:ZthiM KEGG:ns NR:ns ## COG: ZthiM COG2145 # Protein_GI_number: 15802579 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Escherichia coli O157:H7 EDL933 # 1 259 1 259 262 219 50.0 5e-57 MSVQTVSSTAVAHALTALRANRPLVHCLTNEVVQEITANVLLAAGASPAMVVAMEEAPVF TAISGALLINTGTPYPERVAVMKACAQAANDHGVPWVLDPVAAGATPWRTQAIRELLALK PTILRGNASEILALAGSGKGGKGVDSTDDSRTALSAAQRLAEETGTVVCVTGPVDYATDG KRTLSIAGGNVMTTLVVGTGCSLSSLCAAFAAVEKDPVNAAISACTLAKYAAGTAAKHAK GPGSFHDEYLDALYLVQPEALTVGDAA >gi|319804635|gb|ADMF01000024.1| GENE 11 6428 - 7078 454 216 aa, chain + ## HITS:1 COG:BH1431 KEGG:ns NR:ns ## COG: BH1431 COG0352 # Protein_GI_number: 15613994 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Bacillus halodurans # 32 197 27 192 211 131 41.0 1e-30 MTVKPLNLTLYLVLDPDLCSQSVGIVETALAAVQAGAGIVQLRAPTWKKRRMTECARSLK SALTPFHVPLIIDDHADVMLAANADGLHVGQQDLTPADARQLIGSNRILGLSLGSLEDCR PDELALVDYVGIGPTFVTQSKPDAGAAIGLTALQSIAAKAQKPSVAIGGIHINNAAQVGA AGVDGIAVISAICGQPDPYAASVSLLKAFQSNRKQS >gi|319804635|gb|ADMF01000024.1| GENE 12 7089 - 8768 896 559 aa, chain + ## HITS:1 COG:ECs4884 KEGG:ns NR:ns ## COG: ECs4884 COG2194 # Protein_GI_number: 15834138 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 # 15 535 15 542 577 155 27.0 2e-37 MPFPSVFGSLWTPHRAAAWTALFLFLLTASAYFCGVNAKRALQHAVFIVPFIALWLLSLP ARSNESRSGWQKVCLAAAVVGLLLAFIDAALRAFLYQTYSAEPMSTFVLESAANTNLDEA LGFLATEWTGALLGTLLCLAALTVALFVMHLASKTSSDNAMASGWGQWLWRFWMLLFASV CILSWAKPSWRIHYPPVFWSKWMESVAGMQSIWMKADQHEAAEITEARSVLLDASPAPRT IVLVIGESTTRDDWSLYGYSRDTTPKLKALESKDSNLGTFRQAWSVDASTIAAFRSMFTF PVPQSAGDGRINLFALFSAAGWTVHWISNQDDIAIQTQYAVFASEAQFINRMTGRSSASM DLNVLPTFKQALADPAPRKLIVVHLIGAHPHYALRFRDSDEIDWGHDHVMQNLNHLDRSP WVVAARNQYDWAMRYQDEVLSELFHLSKNAQASAKSPLDWIFLSDHGQELGDTANRAGHS QTAPSSYRIPFLIWSSERSFNPYENRPFRADFLSPLMLELAGINWKGEDPRQVLIADDYS WIKPHLPIQDPQMPSSDNP >gi|319804635|gb|ADMF01000024.1| GENE 13 8765 - 10153 603 462 aa, chain + ## HITS:1 COG:no KEGG:CAP2UW1_0180 NR:ns ## KEGG: CAP2UW1_0180 # Name: not_defined # Def: hypothetical protein # Organism: A.phosphatis # Pathway: not_defined # 33 445 25 447 483 89 26.0 3e-16 MKESTPPVLKVSLPEAEELLQAEALEAHPPMGWSAAESDAASRDALAVAGKSDIQAFLLT RAKLVLSRMTKHDPSLKRPRLPQTGWLIKSISLGIIFLGFFSGAVTDQLTSAGAQLNLLS PPLLTVFAWNILAMLAAIAGLVISFRRSTSPAGLSAALARILGSAAHVMRFVAIGKPTDK TYFNKLLPLLLPQTAWRFRAVLHWAALAFGIGLAASLLVRGIGTAYWAVWESTWFADKPD VVAAILQGLYGWLPDFLPGLSPLPDASALSALRVDGSAPSAAVLSAGAPWLARMIWSIVG LIIVPRAVLAAISMFCAARAAQTLIVPIDSSRTEQLLQTAANHSVKTWLLNGSNHPAANQ GTPLLSVNPWSAPDFPELAAFTPQAGDRTVLELDPSATPEEDVHGLLIDAIRKRCANTVL HLDFSELQTRFADVPERIQSRRALWEHFAAQHDIPLEVNGLR >gi|319804635|gb|ADMF01000024.1| GENE 14 10207 - 11673 1230 488 aa, chain + ## HITS:1 COG:no KEGG:CAP2UW1_0179 NR:ns ## KEGG: CAP2UW1_0179 # Name: not_defined # Def: GTP-binding protein HSR1-related # Organism: A.phosphatis # Pathway: not_defined # 9 438 5 430 484 341 46.0 5e-92 MADQQDSLRIHLSLVSHTNIGKTTLARTLLMRDVGEIADRAHVTETTDDYLLARGQDGSE FILWDTPGFGNSVALAKRLEGRSNPLGWFLSEVWDRFTNKSFWLDQKAVRHIRDISSVVL YLVNIAETPDKTPYIQAEMQILSWIGKPVIVLLNQMGKPQAPDIEHAQVEAWKTALKPWP FVKKVLAMDAFARCWVQEEMLFNAIGDVLPAEDEAAYKVLQSVWRRGRQAAYANSIEAMA RHLQQAVSAHVSLPTPTLRERAVSVGRRLGLFRDERDVIADAQAAMASQAADSFYALTSK LIADNGLSGTGVSKEIFQRMKTDWDLAVYSVDPQSAAAVGTSIGAASGAAAGLAIDLSAA GLTMGLSTLVGGLIGAVSGMGAAHAWNLQKKKSGAELFWSEKALTGFLLETVLLYLAVAH YGRGRGDWKESESPEFWKDAALRAIQEEKFSFEPLRTEDIDTSISTLINAIDHIIKNIFK TLYPSDEY >gi|319804635|gb|ADMF01000024.1| GENE 15 11689 - 13710 160 673 aa, chain - ## HITS:1 COG:Cj1055c KEGG:ns NR:ns ## COG: Cj1055c COG1368 # Protein_GI_number: 15792382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Campylobacter jejuni # 75 578 83 569 657 156 27.0 1e-37 MLKVASDRWVEKCINSLVFVISSTFVLSLIRIFFFHHYKSPDLVWSDFYPALIMGMRVDA KWLLIFIAAAWVLLLLSYWRPYFWRYTIAVGVVGQAIMVGLSLGNYGFYGFYGTPFSPLV FGLFQDDTEAILVTLWKDWPIFSYLIAWVLLTIIPIIIVFSVRKIISSAASFGVGCVQKK DSLFIYIVIALIGTISVVGVIRGSLGKFPLRQQDFSVSTNAFINATVPGGAAAFYEAWKG QNAIKFNGGSQMALVEMGFKNKGEAEAAISKIRITGSVIEEKRHSADHVVVVIMESMGRD IFDTQNLPKNDVLGELANQLERAVVFRNGVSINNGTFPSLEGILFDTSISPLTQSRYDKK RFPFSNYLPFKEAGYKMVFLTSGSEAWRMINDNLPIQGFDEIVGSVALSKEFPEAEVGTW GIGDKWMFDKAVDILKEADEKREKICLVILSTTNHPPFRVPDGILVNPVDPNLLPSFVKD ERSKCIPSFETYQYAANALGVFVKSIYSEGLSNNTVVVATGDHNARLQYDSIDYLPHMRG VPLLFWLPDSWDDVRAKADTTRWVSHRDIFPSILGMVLGVPPKIHEGRDLFSNETFDLAL SFTTFGDKGFAIGSWGAVGLNNGGQVTCMRWNGDRLDLLDVCTGEFKLMADAARAQRAIS DYQVREGVLAAPK >gi|319804635|gb|ADMF01000024.1| GENE 16 13972 - 14904 1111 310 aa, chain - ## HITS:1 COG:RSc2716 KEGG:ns NR:ns ## COG: RSc2716 COG0341 # Protein_GI_number: 17547435 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Ralstonia solanacearum # 1 302 1 308 322 351 60.0 1e-96 MEFFRIHRTIPFMHYRHVLNAISFVSFIVAVYWIFTHGLALSIEFTGGTQLEVKYPSAAN TEQIREDLGQVSKEVLVQTFGTASDVVIRVPTKEGQTSGQVAAEVMKVLQAKTPDVQLKS TEFVGPQVGDELARDGGTALALVVVGIMIYLAFRFEWKFSVAAIIANLHDIVIVVGIFSV MHWEFTLPVLAAVLAVLGYSVNESVIIFDRVREHFRTMRRADSMEIVNSAITATISRTVI THTSTLCMTLSMFFFGGPALHYFSLALTIGILLGVYSSVFVAAAIALYLGVKREDLVKQR KRDEVEEMVP >gi|319804635|gb|ADMF01000024.1| GENE 17 14923 - 16818 2149 631 aa, chain - ## HITS:1 COG:RSc2715 KEGG:ns NR:ns ## COG: RSc2715 COG0342 # Protein_GI_number: 17547434 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Ralstonia solanacearum # 1 631 1 625 626 739 60.0 0 MNRYPLWKYILIGIVLIIGLVYTLPNFYGESPAVQVTSGKATVKVTEQTLSQVETALANA NLKPNGLFFEQGAQQNTIRVRFDPTQTEEQLRAREVIEKTLNSDPKDPSHIVALNLVPNT PRWLLSINALPMYLGLDLRGGVHFLLQVDMRAALTKRADAIAADLRTQLRDKRIRHTGIS RIGNDVEVSFATAEERDRANDLLRNTQPDLLLTLPEASKAPYVIHAELSQKAIQNVQNYA LKQNISTLHNRINELGVAEPVIAQQGADRIVVQLPGVQDTAKAKDILGRTATLEVRLVDD SPEALAQLAQGTVPFGDERFTDRDGRPILVKRRVILTGENLNDAQPGFDSQTQEPTVNLE LDNRGARIFQEVTRENVGRRMAILLFEKGKGEVVTAPVIRQEIGGGRVQISGQMTTMEAT DTALVLRAGSLAAPMEIVEERLIGPSLGEANIEAGFRSTLYGFIVIAVFMAVYYQVFGVV SAISLICNVMMLIAILSMLQATLTLPGIAAIALTLGMAVDSNVLINERVREELRIGRQPQ TAISEGYERAFATILDSNVTSLIAGLALLIFGSGPVRGFAVVHCLGIGTSIFTSVIVSRA LINLIYGRQKKLTSVHIGQIWRPDPAKVQAK >gi|319804635|gb|ADMF01000024.1| GENE 18 16995 - 17342 428 115 aa, chain - ## HITS:1 COG:RSc2714 KEGG:ns NR:ns ## COG: RSc2714 COG1862 # Protein_GI_number: 17547433 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Ralstonia solanacearum # 5 114 2 107 109 85 47.0 2e-17 MLFPISDALAAGEAASAGGMESFLVQVVPLIVIFVVFWFFLIRPQQKRQKEHAKMCDALA KGDEVMTMGGISGRIESVDEQSMALQVASVDGKPVVIRMQRSAVQMVLPKGSVKF >gi|319804635|gb|ADMF01000024.1| GENE 19 17470 - 18603 1282 377 aa, chain - ## HITS:1 COG:RSc2713 KEGG:ns NR:ns ## COG: RSc2713 COG0343 # Protein_GI_number: 17547432 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Ralstonia solanacearum # 3 358 2 364 383 582 74.0 1e-166 MAFSFTVKTRCGKARRGTLELNHGIVETPIFMPVGTYGAVKSMAPYELKEVGAQIILGNT FHLWLRPGLEVIGAHGGLHGFGRWDKPILTDSGGFQVFSLGELRKITEEGVRFANPINGS KLFLTPEISMQIQHTLNSDVTMVLDECTPYKIGDRPATEAEAAASMRMSLRWAKRSKDEF DRLENPNTLFGIVQGGMFNHLREESLEGLKDIGFHGYALGGLSVGEPKEEMLRILDEVAY KLPEDHPRYLMGVGTPEDLVDGVSSGIDMFDCVMPTRNARNGWLFTRFGDLKLKNSRYRN DLRPLDPSCTCYTCRNFSRAYLHHLHKVGEILGARLNTIHNLHYYLTLMGEIRAAIENGT LEAWKVQFRTDRARGIE >gi|319804635|gb|ADMF01000024.1| GENE 20 18627 - 19676 846 349 aa, chain - ## HITS:1 COG:RSc2712 KEGG:ns NR:ns ## COG: RSc2712 COG0809 # Protein_GI_number: 17547431 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Ralstonia solanacearum # 6 346 10 349 362 381 58.0 1e-105 MQEQHLSDFDFELPPELIAQYPLADRAASRLLHITEEVIEDCTFRDIEKFLRPGDLLIAN NTRVIKARLLGAKATGGAVEALIERVTGEFTAIAMVRASKSPKPGSKLFFAASGTDLKAE VEVTGRAGEFFELKFAEPVLQVLEAFGRVPLPPYIEHAPEKADESRYQTVYARHPGAVAA PTAGLHFTDDLLNRLKAKGVDIEYVTLHVGAGTFQPVRVENLSEHHMHSEWFSMPEDVAA RINEAKAQGRRVIAVGTTSLRTLESAADRIGHVEAGARDTRLFIMPGYKFRIVDALVTNF HLPKSTLVMLVSALVGRERILEAYAHAVREHYRFFSYGDACFIEKARGA >gi|319804635|gb|ADMF01000024.1| GENE 21 19787 - 20347 658 186 aa, chain + ## HITS:1 COG:NMA1049 KEGG:ns NR:ns ## COG: NMA1049 COG3028 # Protein_GI_number: 15794000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 11 165 24 178 191 113 40.0 2e-25 MRPNQIEDDEEEEFRGPSKSHLKRVQNELQELGRVMTGMGDETLKKIGLPEAVYDEIIEY RRMRNFGAQRRQLQLIGKKMRDMDPAAVREAIARATGESRAAVALQHRCEALRDRFLADD EAVKNFIDEHTDIDIRRLRELVRSARREREQAKPPKSARELYRLLYAYFDEPLDLMMAEE IEIEEN >gi|319804635|gb|ADMF01000024.1| GENE 22 20378 - 21799 1569 473 aa, chain + ## HITS:1 COG:ECs0009 KEGG:ns NR:ns ## COG: ECs0009 COG0521 # Protein_GI_number: 15829263 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Escherichia coli O157:H7 # 9 206 2 195 195 263 69.0 5e-70 MKPPRSADNELILGLVSVSDRASQGIYEDKGIPALEAWCRKAVKTPVKIHKRLIADERFD IEKTLRELVDIVGCDLILTTGGTGPARRDVTPEATLAVATREMPGFGEQMRAISGHFVPT AILSRQVGVLRETPDHAALILNLPGQPKAIAETLEGLKDESGKSLVNGIFAAVPYCIDLI GGPYIETNEDVVKAFRPKSARRTVSQSADSVKEAAAAAPEAESKAEHKPAAAAAPQSAPQ PQPKTPAFAPKDILTVMPRSGARPRLTCVWLHGMGVDNSDFAPFADEIEHVGGPACRFVL PNAPMRTLSRSPDYPPLRAWYDIPGRNIDDAEDEFGIRASSARVAQLIDELEAEGVPRHT IVLGGFSQGAAISLFTGLRLARPIGGICALSGYLPLAGRLFSEAAPAARRTPIFIAHGDF DSVVPAVMAERSAEVIAQIDPTLITRTYPIDHEVCANEMRDIAAFLNSIAQHA >gi|319804635|gb|ADMF01000024.1| GENE 23 21878 - 22393 343 171 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQRRTFMTAALATAVLSLAGCAAQTRADTDMPAEAFTPEGARRYLAKCRTAREAIQVYGD PERTMKSNTRPSQKGFVWEWVGVRPSFLADKDKRSSCTPTVKRELHVWCGSGGEIVDIEV VGFFYTQVKLPALSPIFAELRALNADELQSLKVPVASGEVLEEYNAYYARQ >gi|319804635|gb|ADMF01000024.1| GENE 24 22397 - 22867 560 156 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQIRVIFAAVAAVAILAGCAAGNDRLRNLNSQQIAEQIVDTQTNRQDVVALLGEPNTTQQ EADGTKVLEYTWVRSRPSAKNFIPLNPIDEFPTTKKSLRVWIDDNDRVVKHEYSGVFYVY RKPLIGSNSTHSMRPLTQEELDGLADPTEEAAADKE >gi|319804635|gb|ADMF01000024.1| GENE 25 23462 - 23956 207 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 3 139 121 255 278 84 42 3e-15 MPRAWISLGANLGRPQATLTAAAKALEQSEGIAHLRLSSFYSTSPVDSSGPDYVNAAAAV DTNCSPEALLKLLQRIEYAHGRVRPAGVRNAPRTLDLDLLAYEGEVRSTDGLTLPHPRMY ERLFVLVPLAEIEPNWRSPAGLPIAELIEQVIRKDSTQHIRKIS >gi|319804635|gb|ADMF01000024.1| GENE 26 23956 - 25410 1196 484 aa, chain - ## HITS:1 COG:RSc2627 KEGG:ns NR:ns ## COG: RSc2627 COG0617 # Protein_GI_number: 17547346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Ralstonia solanacearum # 23 423 49 472 514 397 50.0 1e-110 MFDSIVSRVRSFLGTSANVEPQREPRIIPKEVHGIDPELVAWQAKRCCEALQRRGYRAYI VGGAVRDLLLGVAPKDFDVATDATPEEVKRAQKRAIIIGRRFRLVHVIFGQEIIECSTFR ALEGAGVRKDSSGRVISDNVFGEMWEDAARRDFTINALYYDPATEEIYDYHHGFEDLGKK RLRMIGNPEERYREDPVRMIRAVRISAKLGFAIEPATERPIARMAKLLSNVPSARLVDEA LKLLTCGHAVECVSRLRKEGLAEAVLPTLNRLLATPDGEAFLMLALRRTDERLAIGKRIS PFFLFATLLWPQVRLRWQHNEEVRGLPRLAALHDAAVEVLETESHSLAIQRRFQSDMHDL WVLQARLERRTGKSPYSVINHPRYRAGYDFLLLRAQMGEVPEALPAWWDHFVQADSDERA EMVKAAQIEARQTGEDARRGRCAALQAGSDAPAGEERERRRPRRRPRRSRSRRPVDHVGS GSSE >gi|319804635|gb|ADMF01000024.1| GENE 27 25427 - 26113 514 228 aa, chain - ## HITS:1 COG:RSc2626 KEGG:ns NR:ns ## COG: RSc2626 COG0560 # Protein_GI_number: 17547345 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Ralstonia solanacearum # 1 226 1 224 224 152 38.0 7e-37 MKLAVFDLDHTLLPIDSGDAWSHWLVRKAGLDEEKIGAQIEAYAQAYRTGHFVPLSFIRF QFGLLAAQKRQDLEAWRASFIDEVIRPAVRPEALQLVAQRRLAGYEVVLATGTHRFVTAP IAALFGIQHLIAATPEIGSDGEFTGELVGLDSYGEGKLALIKNWMANHAPSGGFEAFEGW SDSINDKPLLEFAAGFQPHGRAVAANPDPQLARLALERGWEVASVFRK >gi|319804635|gb|ADMF01000024.1| GENE 28 26121 - 26861 675 246 aa, chain - ## HITS:1 COG:ECs3358 KEGG:ns NR:ns ## COG: ECs3358 COG0593 # Protein_GI_number: 15832612 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Escherichia coli O157:H7 # 22 218 30 244 248 95 31.0 7e-20 MQPIAQNPDQYLLDLPELQGRDRPTFENFVVGSNSEAAAALARMAADEGPKFLYLYGPRG AGLSHLLEAYLPGTAAALYPVPIYQPGVKRYAVDDIDALDEGYARQLLQLQNAVYVDPDA RLVCAGRLPPKELKLPAGVINRLLGGLCYAVEPLNEEDRIRELARQAALRGILLTPDIGQ WISAHLPRDMRSLTRVMDVANQIALHAQRKVTLQVIREAARAAGMAEDESIAQQGEAPTA LFGTGH >gi|319804635|gb|ADMF01000024.1| GENE 29 27165 - 28193 1063 342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 4 329 12 337 356 414 62 1e-114 MSQLSYAAAGVSIDAGDELVERIKPAAKRTLIPGVLGSIGGFGALFEVSRDYRNPVLVTG TDGVGTKLMLAFQLGRHDTVGQDLVAMSVNDILVQGAKSLFFLDYYACGKLDVDVAERVV KGVAKGCELAGCALIGGETAEMPGMYPEGEYDLAGFAVGVVEKDEIIDGTTIKPGDVVLG LASSGPHSNGFSLLRKVVEVAGADWSMPFDGATLADRAMEPTRIYVKQVLSVMKKVQIKG MAHITGGGLIENVPRVLPEGVQCCIDGSSWTRPAIFEWLEEKGQIDSHEMYRVFNNGIGL VVIVSAEDADRAMEAFKAEGEKAFRIGEISTLPAGEAPCVVL >gi|319804635|gb|ADMF01000024.1| GENE 30 28274 - 29311 655 345 aa, chain - ## HITS:1 COG:NMB0935 KEGG:ns NR:ns ## COG: NMB0935 COG0324 # Protein_GI_number: 15676828 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Neisseria meningitidis MC58 # 39 327 4 295 313 286 54.0 3e-77 MQSRQADMDNAFHDGSRSTVYAGPLMTDQPMNMGQAAAPQAFLLLGPTASGKSALALELA RLLPVEIISIDSALVYRGMDIGSAKPTSVELQAAPHHLIDIRAINEPYSAADFVADASRL VREIRARGRLPLIVGGTMLYAKAIREGIDEMPSTSPEVRSAVAAEGAAKGWPAMHAELAK IDPAAAERLAPNDKQRIGRALEVFRMTGKPLSHFHRKAPHPAFPMLTAALVPEDRAALHE RIEERFDAMLAAGLLDEVRQLMAEPGFDANSPAMRAVGYRQAVQFLEGRTNYAAFRLAGI AATRQLAKRQLTWLRSMPDVIKIEPFAPDAFETLLKLAQPLVPAG >gi|319804635|gb|ADMF01000024.1| GENE 31 29236 - 31263 1361 675 aa, chain - ## HITS:1 COG:RSc2563 KEGG:ns NR:ns ## COG: RSc2563 COG0323 # Protein_GI_number: 17547282 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Ralstonia solanacearum # 5 675 9 636 636 474 44.0 1e-133 MQPNRPIAELSSQLISQIAAGEVIERPASVVKELVENAVDAGADRIEVRIDGGGLSRILV SDNGCGIPKAELPLAVKRHATSKVATLADLEAATTLGFRGEALASVDSVAELIIESKAAG AGEAWRIQRGAVEPAGGMTGGTRVEVTDLFYKTPARRKFMKSESTETAHVTAQMERIALA NPQAAFSLYANGRRAMQLEAESAEDRIKALMPKDFKEACRPVSAESDGWKLTGLVGLPTI SRTRADGQYLFVNGRFIRDRVMNHAVRAAYADVLHGQAQPLYCLFLTIPPEEVDSNVHPT KTEVRFRDSSRVHSFILHAVEAALAPPLAQAAGGAAVVPLADASLGSVPARREAALFGRS SLAEPQEAIATKVPADHPNALWGAPPTGTGFERADSERPASAASGKPVLQRFPAAYGERP KAPSPVAVAAAMKFYDPNSSSEEAPEPKSLEPQKLPQMEQEEHPALFTPLQAQSDGRGFL GRALAQVAGVYILAENASGLVIVDMHAAAERVLYERMKRAMAESKLAVQELLMPLVVRVT PAQYAAFEEFEKGEVFPALGLICTGADEGAVALRGVPAMIAEAPLGELEALLREVLDDLA EFGASEAMDVLKNRILSTMACHNAFRANRKLSLPEMDALLRDMEKTERADQCNHGRPTWT TLSMTDLDRLFMRGR >gi|319804635|gb|ADMF01000024.1| GENE 32 31490 - 32155 748 221 aa, chain + ## HITS:1 COG:RSc2559 KEGG:ns NR:ns ## COG: RSc2559 COG0586 # Protein_GI_number: 17547278 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Ralstonia solanacearum # 1 212 1 211 218 172 40.0 5e-43 MDLFGLIVELFTNADHFLVSIATDYGTLIYIAMFVIFFLETGIVVMSFLPGDSLLFVAGT VAAAGTASPWLIMLAVILGAIFGNSLGYATGKWLGNRIYDGSIHWIDAKKLEHAHSFYLS HGGKTVVLARFVPIVRAFAPLVAGAARMDGLRFELFSGFGAILWAVSIVGAGYLFGNIPF IQQNLSKILILGVVAAAMGPILVGYVWKTYQKMHEKREHKF >gi|319804635|gb|ADMF01000024.1| GENE 33 32370 - 34790 2496 806 aa, chain + ## HITS:1 COG:alr3593 KEGG:ns NR:ns ## COG: alr3593 COG0855 # Protein_GI_number: 17231085 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Nostoc sp. PCC 7120 # 114 798 12 710 736 625 46.0 1e-178 MSDKPTLSRKAASALQTEGAETAAKESTARTDKPAAVQPAGIDAKPAEAEVKSEHTAVKK TAVRRSTASKKTITKTVKSAKSVKTVKAVKVSASSTASLESAPPPLPPVEGVPDLSDPLL YINRELNWIEFDRKVLEEACDLSVPLLEQLKFLAIFHNNLDEFFMVRVANIIRQYKMGAA STSADGLPPVKQLAEIRRRVLGMLARAQNHWKNKLAPELAKKDIAIRRWKNLSAKQKTFL EGYFDNEIYPILTPQAIDAGHPFPTISNLSLNFIVELEAADGSMRYARLKCPNNMPRFIF VPRTKESAYAELGFNSSGRDDDIILLEDLIREHLGKLFPGHKVVKSGVFRITRNTDIEIE EDEADDLLAAVKDFVDQRRFGDVIRLEIEAGTDAALTNFLMDKLELLPFQLFRIKGPMAM SEFMALSGLDRPALKDAPYKGLEPLLFSEGDIFGTIKTRDVFLYHPYESFSGVLDFIRRA AADPQVVAIKQTLYRCGSNSPIVAALIDARRRGKQVTAVVELKARFDEERNINWAEEMEK AGVNIVYGFAGLKIHAKLCLVVRREADGMTRYVHISTGNYNPSTAKIYTDYALFTANAAI CADVSDLFNVMTGYSDQTTYRRLVVSPHSTRSSIVAAIEREAAEHQKTGKGEIIFKCNQL VDRAVIQALYAASQAGVKISLIVRGICCLRPNIPGISDNIQVVSIVGRFLEHARAYWFRN NDDPFLLIGSADLMPRNLDGRIEVLVPVLDPAIRSRIKATLDLQLADNVQSWKLQSDGTY VRLAPPRHGKAVDSQEVLAKHYGRVE >gi|319804635|gb|ADMF01000024.1| GENE 34 34863 - 36116 1378 417 aa, chain - ## HITS:1 COG:YPO1009 KEGG:ns NR:ns ## COG: YPO1009 COG2195 # Protein_GI_number: 16121311 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Yersinia pestis # 2 414 3 408 410 429 51.0 1e-120 MINRANELLERFMRYAAVTTQSEAGAKTVPSTAGQRVLAQMLAEELKALGLSDVEVSEYA VVTGRLPSNLPAGTQAPKVGWCAHLDTVDAGLSPDIHPQVVKNYQGGDICLNAEKNLWLR VAEHPEAERYVGDDLILSDGTSVLGADNKSAIANIMTALHIIVEEGRPHGDIYVAFVPDE EIGLCGAKKIDFSKFPVDFAYTIDSCELGEIVWQTFNAGSAWVDIQGITAHPMSSKGQLL NPILVAHDFIGMLDRGQTPEFTEKTEGFVWVNGIQGGPAKCRVSLKIRDHSLKRYEEKKT LIRAIVDCLRVRYPRAKINLTIEDVYGNIADAIKPENSACIDMLRRAMEIEQVTAKDIAM RGGTDGSFISTQGIPTPNYFTGAHNFHSACEFMPMSSWLKSLAVTLRLVELAAGVTK >gi|319804635|gb|ADMF01000024.1| GENE 35 36263 - 37465 1344 400 aa, chain - ## HITS:1 COG:RSc0571 KEGG:ns NR:ns ## COG: RSc0571 COG0126 # Protein_GI_number: 17545290 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Ralstonia solanacearum # 3 400 20 414 419 461 65.0 1e-129 MQVKTLDSLAASGVLKDKRVLIRSDLNVPRNDEGAITNDARIVASLPAIKTALLAGAAVM VTSHLGRPKEGVLRPEDSLQVVADRLGELLGREVPVVQDWVDGVEVKPGELVVLENCRCN VGEKKCDEALSKKYAALCDVYVNDAFGTAHRAEATTVGVAKYAPIACAGPLMAKEIEALS KALGSPSRPLAAIVAGSKVSTKLTILSNLAEKVDRLIVGGGILNTFLLAAGRPIGKSLAE PDLVDECRKVLEILEKKGAKLPMPVDVVAAKAFAADAPYRVCSVDEVADDEMILDVGPKT AEHLAHELRSAGTIVWNGPVGVFEMKPFAKGTEALAYAIAEATDKGAFSIAGGGDTVSAV NAFGVEDRISYISTGGGAFLEFLEGKTLPAIAVLEERADQ >gi|319804635|gb|ADMF01000024.1| GENE 36 37633 - 38643 1246 336 aa, chain - ## HITS:1 COG:NMB0207 KEGG:ns NR:ns ## COG: NMB0207 COG0057 # Protein_GI_number: 15676134 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 334 1 336 343 440 65.0 1e-123 MTIRVAINGFGRIGRNVLRAHYEYAKQHDVEIVAINSPGDLAVNAHLLKYDTVHGRFATP VETDGKDMIVGGDRIHVFKTRDPRELPWADLGVDLVMECTGAFNSKEASMVHIESGAKKV LLSAPGKTADATVVYGVNQDVLKATDLVVSNASCTTNGLAPLVKPLQDKIGIEHGLMTTI HSYTNDQVLTDVYHKDLRRARAATHSMIPTKTGAAKAVGLVLPQLKGRLDGFAVRVPTIN VSFVDLTFMAERATSIEEINAILKEASEGELKGILGYNDEPLVSIDFNHDPRSSIYDSTL TKMSGDRLVKVMAWYDNEWGFSCRMLDTACAMMAAK >gi|319804635|gb|ADMF01000024.1| GENE 37 38696 - 40705 2052 669 aa, chain - ## HITS:1 COG:RSc2750 KEGG:ns NR:ns ## COG: RSc2750 COG0021 # Protein_GI_number: 17547469 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Ralstonia solanacearum # 1 668 9 671 675 824 64.0 0 MSQVSPQTMANAIRALAMDAVQKAKSGHPGMPMGMADIATALWTRHLRFNPQDPKWSGRD RFILSNGHGSMLQYALLHLTGFDLSMDDLKAFRQLGSRTPGHPEVDITPGVETTTGPLGQ GIANGVGMALAEKLLAAEFNRDGFPVVDNRTYVFLGDGCLMEGISHEVCSLAGVWKLNKL IALYDDNGISIDGDVRGWFRDDTRGRFEAYGWNVIGPVDGHDINAVDQAIAQAKESAEKP TLIICRTTIGKGSPNRQGTAKVHGEALGDEEIAATKAALGWTYGPFEIPQDVYAAWDHRA EGAKVEKEWQQTYAGYKAAYPELAKELERRLAGDLPDQWDAAVMDAVCQAAEAAETVATR KASQKALNALAPVLPELLGGSADLTGSNLTNWSGSTSLNTGDFHARHISYGVREFGMSAI LNGIALYGGFIPYGATFLTFSDYSRNALRMSALMNLRAINVFTHDSIGLGEDGPTHQSVE HIPSLRLIPGMDVWRPCDTVEAVVAWASAIERRDGASCLIFSRQNAAFIDRDEVDADAIA MGGYVAAEAPLGEGEAQVVLLATGTEVGLAMDARAKLAALNINARVVSMPCTNRFDRQST EYRQSVLPPGLPVLAIEASKTDLWWKYFTGRGDVLGVDSFGESAPAKDLWIKFGFTVDNV VAKVEALLQ >gi|319804635|gb|ADMF01000024.1| GENE 38 40917 - 41666 639 249 aa, chain + ## HITS:1 COG:PA0419 KEGG:ns NR:ns ## COG: PA0419 COG1385 # Protein_GI_number: 15595616 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 245 1 239 240 147 41.0 2e-35 MPTPRFFIDAPTDAFQLGGRFELPPKTARHAGRSLRLAAGEIVELFNGTGAAWSGPVGFS DASAWVELEHRTDRTAESPLAITLLQSLVAPEKADWIVEKAVEAGISEIIFMPAERSVTK LAGERLEKRLARLTDIARSAAEQCGRNVVPLVRAVPSLEAGFKTVSGDVKFVLAPGADAS AASSMLPGLLSVAFAVGPEGGFSAREIELAAAHGWRPQLLGPRVLRTETAGLAAAIWAQT LVGDLPRAC >gi|319804635|gb|ADMF01000024.1| GENE 39 41743 - 42642 838 299 aa, chain - ## HITS:1 COG:RSc0709 KEGG:ns NR:ns ## COG: RSc0709 COG0741 # Protein_GI_number: 17545428 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Ralstonia solanacearum # 83 226 157 299 362 122 51.0 1e-27 MGAVGSAAVAAAVWLTAVGLAGPAGVQAATQTEIVAIEEADVHESLNRFLEEKEANAVAL VEDWERKSPASEASLSEAGDASEESVAAYINRSYRVPLEEARQLTAWALEIGQGFDVDPL LILSVAATESSFNPKAKNGSGAEGLMQVMTSVHTEKFKAFGGAKAAMEPYPNMVVGASIL ARLIDRTGSVSQGLKHYYGAGNQSSDNGYAAKVFKERSRLQVAAAGDSDRAVELSRANRT GPAYNAKHRPRNLGYGEWMQLLETRAQQGGSVKRLAPESDAVAENRRSSDSAEGSSTES >gi|319804635|gb|ADMF01000024.1| GENE 40 43197 - 43484 360 95 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRIPIHRGGITSAGYDRTRRWLDVEFDTKRVLRAENVGSEIADRFLHSSAPHEYWKEEI EDVYTVREISAKESDEEKPAAKKSIDDLKRLFGDL >gi|319804635|gb|ADMF01000024.1| GENE 41 43554 - 45098 1671 514 aa, chain - ## HITS:1 COG:PA0913 KEGG:ns NR:ns ## COG: PA0913 COG2239 # Protein_GI_number: 15596110 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Pseudomonas aeruginosa # 86 513 56 481 482 461 56.0 1e-129 MNREDQTEAPNEEIAGAPTLDSDEASRALARVQQVLDSDEDRARALEKAREKAEKAARAK SGGSEKPDEDDKDDEARPLTPEAAQQLRDILEPLHPADIAWVLEALPLDDRLAVWNQVQS ESDGDILLEVNEGVRETLIEAMDRDELVDAVETLDTDQIADLVDDLPPDVMAEVQEGLSH EERAQLRAAMSYPEDSVGARMDFEMVSIREEVTIDMVLRYLRRFKELPDHMDQIFVVDRL GRLKGALAVAQILTSDPAKQVRRIMQTETFTLNPLDDASDAAQAFERYDLVSAAVVDEAG RLVGRLTVNEVVDVIREESDEDAFSAVGLDDEQDLFGSVWGAAKSRWLWLGVNLCTAFFA SRVISAFDGTIERVVALAALMPIVAGMAGNSGNQTLTLLVRSLATGQVTLANTIDIWKKE LAVAVVNGLLWGAIAGLCAWALYWDSPQGHTLGLVMALAMFLNIVQGAAVGLAVPLILNK MGRDPAMGGSVLLTFTTDSGGFLIFLGLATIFFR >gi|319804635|gb|ADMF01000024.1| GENE 42 45345 - 47369 2135 674 aa, chain - ## HITS:1 COG:RSc2779 KEGG:ns NR:ns ## COG: RSc2779 COG0557 # Protein_GI_number: 17547498 # Func_class: K Transcription # Function: Exoribonuclease R # Organism: Ralstonia solanacearum # 1 623 1 635 693 531 48.0 1e-150 MYLYFEDDGAFKAGTVLSQAGSAYQVELTTGRRSKIKASHVFFPFETPSASELIARIPEA AAELDPAFLWEAAPAEEFSFKDLAQEYWGEKPSPVELAALLTVLHANPVYFYRKGRGVYR KAPAEILSKALEALERKRRMEEQKKAWTAEMVEGKLPEAIGRQALTLLLSPDKNGIEWKA LSDAAAETRQTPLRLMLALGGIASPWRWHVDSFYTANFPHGRGFPAGLPEPPADTWEELP IADVDAFSIDDSTTTEVDDAASIEHLEGGITRVGIHIAAPALMIQKDSPLDTVAKTRMST VYAPGLKTTMLPENWIKASSLDEGHLVPCISLYVWVKDDTFAVERTETRLERIALKANLR YDKIDDLVTEEAIAADALTIPYAHEIAWLWHFAKRLQHGREEVRGRPEPTGRVDWYFALE GDGEDAVIHVKGRRRGAPLDLLVAELMIFANSTWGLWLEEHGTPGIYRSQRMGRVRMSTS PGPHDGLGVERYAWSTSPLRRYVDLVNQRQMIAVLRGETAPYGRTDVDLFTIVSQFEAIY GLYSDFQTRMERYWSLRWILQEKLTSIEAIVVKGDLVRIDGLPFMQRVPGLTEDLPRGRK VELRILGCDLVDLVMDARLVKVLDEAITPEEEAALEESLNEASEAAEAAEEVKEAKAAEH AAQADAAQVLSASN >gi|319804635|gb|ADMF01000024.1| GENE 43 47453 - 48082 340 209 aa, chain - ## HITS:1 COG:RSc2781 KEGG:ns NR:ns ## COG: RSc2781 COG3150 # Protein_GI_number: 17547500 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Ralstonia solanacearum # 9 161 5 156 210 82 37.0 6e-16 MERSAVDRVVYLHGFRSSPASAKGRELAAAAAEWNADFSAPDLNLSPREADALVGSLLSP LSAQARRCTLLVGSSLGGFYALRAARAYGCPTAVVNPCLMPWDFVPQQVGLQTIFGTNRT IMVKPGFADEFRELAAEMPAAPLDPADALVLLSTADETLDWHIADRALRDSPKVLSTEDD HRMQRFAECLPAVRGFFMRRKIVPAFDAR >gi|319804635|gb|ADMF01000024.1| GENE 44 48085 - 49467 1352 460 aa, chain - ## HITS:1 COG:RSc2782 KEGG:ns NR:ns ## COG: RSc2782 COG0773 # Protein_GI_number: 17547501 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Ralstonia solanacearum # 1 450 1 453 461 502 60.0 1e-142 MHIHILGICGTFMGGIAQIAREAGHQVTGCDKNVYPPMSDALRANGITITEGYGAEQLAV APDLWVIGNAVSRGNPLLEAILNAGLPYTSGPQWLSENILTGKKARTVLAVAGTHGKTTT TSMLTWILREAGLHPGFLIGGVPCWGEQSAALGDPQAPFVIEADEYDTAFFDKRSKFVHY RPRIAILNNLEYDHADIFENLQAIETQFHHLVRTMPSEGTIIANAKAPALDRVLARGCWS KLERFDTPFGTPDGWTLAEDGSASLGAEVFGAVKIHMPGRYNELNALAAVAAARAAGVLP QAALKALESFPGVHRRQEVKGEADGCLVIDDFAHHPTAIHETIDGVRGRWPGRRLLAVLE PRSNTMKLGTMKDRLAGALADADAVFCYAGPGVAWSPEEALKALGSHAWATHDFDALVTQ VVNAARPGDVILCMSNGGFGGIHGKLLAGLKAKAESRAGA >gi|319804635|gb|ADMF01000024.1| GENE 45 49612 - 50214 605 200 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MREYTRQEQEAAAVAAKLIAAEGRTWARAFRDAQRSVGIRPDPNLTASEIRRWFALFAPH EHQALLAAKRHAALHVMRSVPELNCRLIGVVLSGAAVETSPAELVAIGTGEKEAFLALLN AGFLPEPLDAPYPTAFARRVGEKCLDSLLLDVRGEPVLVRIVPEHTPLPALTRPDEFQAE WEAAGALPSDALAQVLSDTL >gi|319804635|gb|ADMF01000024.1| GENE 46 50568 - 51041 503 157 aa, chain + ## HITS:1 COG:RSc2786 KEGG:ns NR:ns ## COG: RSc2786 COG0511 # Protein_GI_number: 17547505 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Ralstonia solanacearum # 1 157 1 155 155 139 60.0 2e-33 MDLRKLKTLIDLVSESGVAELEITEGEDHVRIVNRPTVSAAPVVQAPAAVTVAAVPQAAP APAAAPAAAPAPAQDAAQAALPTITSPMVGTFYRAPSPGAAPFIEVGDTVKKGQVIGIIE AMKLLNEVEADKDGVVQAFAAENGQPVEYGQPLVILG >gi|319804635|gb|ADMF01000024.1| GENE 47 51061 - 52422 1421 453 aa, chain + ## HITS:1 COG:RSc2787 KEGG:ns NR:ns ## COG: RSc2787 COG0439 # Protein_GI_number: 17547506 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Ralstonia solanacearum # 1 444 1 444 456 703 76.0 0 MFGKVLIANRGEIALRIQRACRELGIKTVVVHSTADADAKYVRLADESVCIGPAASSHSY LNIPAIISAAEVTDAEAIHPGYGFLSENADFAEQVESSGFAFIGPRPESIRLMGDKVSAK QAMRDAGVPCVPGSDGALSEDPQEIIQTARKIGYPIIIKASGGGGGRGMRVVRTEAALLT SVNMTREEARVAFGNPTVYMEKFLENPRHIEIQVLSDNFQNAVYLGERDCSMQRRNQKVI EEAPAFGIPRRAIEKLGSRCVEACRRIGYRGAGTFEFLYENGEFYFIEMNTRVQVEHPVT EFITGVDIVAEQIRIAAGERLSFKQRDIEIRGHAIECRINAEDPFTFVPCPGKVTAWHLP GGPGIRIDSHVFAGYTVPPYYDSMIGKLIAYGDTREQALARMRVALTEFACEGIKTNVKL HRLLLSDERFARGGTSIHYLEEKLHSHSSSGVN >gi|319804635|gb|ADMF01000024.1| GENE 48 52521 - 53417 777 298 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|33603362|ref|NP_890922.1| ribosomal protein L11 methyltransferase [Bordetella bronchiseptica RB50] # 1 298 1 307 307 303 52 3e-81 MREYRILADERSAEDLSDLFLEKGALAASLEDADADSTDEAPLYGEPGLEPETCAWPRSI ISVLTADDCHFKNLLDDCVKELGCEAPELLSVSDVEDQDWVRITQAQFQPSHVSPRLWIV PSWSEPPVADALNVRLDPGVAFGTGSHPTTRLCLNWLDENIKSADRVLDYGCGTGILAIG AKKLGAAEVCGTDIDPQAVEAARDNAIRNDVEAQFWLPADMPEGTFSIVVANILANPLKL LAPALLGRVAAHGALVLSGVLARQADEVIAVYKAADPTLVLSVWREEDGWVCLAGRRA >gi|319804635|gb|ADMF01000024.1| GENE 49 53460 - 54302 777 280 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MARIIRCPSCGALWRLEGAAEENYLCSACGREFSAASAQTVEVDDQALDAALAELKAKKS EAAQAAPRQPMTEPRFATKVAQELNTPTTAEKNEPPAQFDEKEAGRGAPMPAIYRTKKSG LGSFLLFVCILLCAAVGAACAFLMMHQFVLSQAPYVRPVYEKVCRSLPCPGFVWADASAF KAKATLAPDETLGLAKPTAVVELTNTSEYPQMLPVIELKYLDPAGSTLLQRVLEPADYGF PQKPAILPAGESLTAQIKMEGTLSFAATAAQVKPVVDAGR >gi|319804635|gb|ADMF01000024.1| GENE 50 54395 - 55354 776 319 aa, chain + ## HITS:1 COG:RSc2791 KEGG:ns NR:ns ## COG: RSc2791 COG0524 # Protein_GI_number: 17547510 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Ralstonia solanacearum # 1 314 1 307 311 186 35.0 4e-47 MSVLITGSIAYDAVFSFAGAFGEQITRPVEPGFNTTFLTRAMRRDFGGCAGNIAVAMKRM GGEPLIWGAVGRDGGDYLEHFGREGIRTDGIGVFSNAYTAQCLIITDHTGAQIAAFHPGA AERTPEVRWPTDADGKEAQPAIAILSPGGRETTLFAAQACRAREIPYFFDVGQELPLFSA EELLDLAHHAVGIIYSDSEAEAFEQKTQQSDADLAESGLIVVRTLGSRGARVWLPGERHA AFVPTVPIQKVRSPVGAGDAFRGGFLYALERGFSPVEAAQWGAVAAGRKVAGAGAQDYEL TPQAAQLDFDQWFGKQSRK >gi|319804635|gb|ADMF01000024.1| GENE 51 55364 - 55912 492 182 aa, chain - ## HITS:1 COG:RSp1385 KEGG:ns NR:ns ## COG: RSp1385 COG0762 # Protein_GI_number: 17549604 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Ralstonia solanacearum # 4 158 5 161 183 102 39.0 5e-22 MLHLLQYILGIIFSCFGAILLLRAWLHYWALSPRHPLCEFVRRITDWLVVPISRVVPTRG GVHWSALLSALAVAVVAVLVHRTIGHLPATPIGLIIAPFAMMARWALEMISWGAIIWAVL SWVNRESPMTYTLAVLLDPFMRPIRRVLPTFRGIDFSPLVLILITNLLLIVIVPFSRGFI IL >gi|319804635|gb|ADMF01000024.1| GENE 52 56002 - 56718 446 238 aa, chain - ## HITS:1 COG:RSc2806 KEGG:ns NR:ns ## COG: RSc2806 COG3023 # Protein_GI_number: 17547525 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Ralstonia solanacearum # 34 217 22 190 200 168 50.0 7e-42 MPRCRQIVSEDTFITQEGRLKGVPSSPLYSSSFHPSPYWDERPQLTKSGAAGDPVDLIVL HFISLPAGTFGGDAVDRLFMGTLNPDRRDWPQDPAWEPLKTLKGLHVSTHFFIRRNGEVI QYVPTVKRAWHAGLSNFRGRNACNDFSVGIELEGTGEVPFTAAQYQALGELLPAICRRHP VKWVTGHEFIAPGRKSDPGPFFDWGRTAQLLPAGVALAIDETDCDREALARRMAEHSN >gi|319804635|gb|ADMF01000024.1| GENE 53 56694 - 56960 125 88 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRILFFLGIFIVIAVAWSISRRRSELTIKERDELEELRRTQKGRTPAAVGEPMERCAHC GTYFPKRDAVHRGGKSYCSAECRDADKS >gi|319804635|gb|ADMF01000024.1| GENE 54 56970 - 57782 960 270 aa, chain - ## HITS:1 COG:RSc2810 KEGG:ns NR:ns ## COG: RSc2810 COG4137 # Protein_GI_number: 17547529 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 39 269 64 298 303 100 34.0 4e-21 MSVLLISTGFAALLYLVSGIAIMSAMKKGAEAKASSLLRWPVLLGLVLHGYAVGQEMFTA EAVHFGFGYAVSVMFFFAVVTLLIESWVHRIHALFGIILIAAAFGALFPVFFQGQVVPAA DWTLAFRWHLVFALAAYSFMMIAFVQAVLMMLQNTRLRAKGLSANDDLLDSLPGLVVMER VFFRIVATGFFCLTLVLILGAVVTKELQGVYFLFDHKAVLTWISWLVFGVLLLGRTVWGW RAKTALRLFWAGFVVFAVAYFVYSFVLEVF >gi|319804635|gb|ADMF01000024.1| GENE 55 58056 - 59477 1793 473 aa, chain + ## HITS:1 COG:RSc2811 KEGG:ns NR:ns ## COG: RSc2811 COG0541 # Protein_GI_number: 17547530 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Ralstonia solanacearum # 1 445 1 459 476 543 67.0 1e-154 MLDNLSQRLSKIVKTMRGQARLTEANTKEMLREVRLALLEADVALPVVKEVLSRIKEKAM GEEVVGNLNPGQALVGVVQRELTAIIGGDLPPEERSLNFRVQPPAVILLAGLQGAGKTTT AGKLARWLVHDEKKKVLTVSCDVYRPAAIDQLKAVTEQAGADWFPSHTGEKPLDIAAAAV SEARRRFYDVLIVDTAGRLAIDEVMMQEVADLNTFLKPAETLFVIDAMLGQDAVNTAKAF NDRLPLTGIVLTKADGDSRGGASLSVRYVTGKPIKFIGTGEKLGGFEPFDPEAMASRILG MGDIVGLVKDVTKSIDMAEAAKLAEKIRTGDKFDLTDFRAQLQQMAGFGSFSSLMEKMPA QLQQAASKVSDEDVQKNLRRTLGIIDSMTLQERRKPELIKASRKKRIAAGAGVPVQEVNR LLKQFEQTQDMMKRMKRGGLSKMMRMLGGMKLPGMGGGFPGGFPPGGFPGMPR >gi|319804635|gb|ADMF01000024.1| GENE 56 59506 - 60111 480 201 aa, chain + ## HITS:1 COG:RSc0503 KEGG:ns NR:ns ## COG: RSc0503 COG0817 # Protein_GI_number: 17545222 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Ralstonia solanacearum # 5 154 1 151 181 127 46.0 1e-29 MAAAVRILGLDPGLNHTGWGIIDTTGAKSIWVASGVFDIPKGETAARLAHIAREIEAVIK THLPTVAACERVFVNVNPQSTLLLGHARGAAICAASLAGLAVEEFTPSEIKQAVTGSGSA DKKMIQAMVERLLPIPHHPRTDEADALACALCLASSLKLRALEKSGGTNRTYATARRGLG SYGRGARSAWTALVEKKDPKK >gi|319804635|gb|ADMF01000024.1| GENE 57 60108 - 60689 770 193 aa, chain + ## HITS:1 COG:NMB0265 KEGG:ns NR:ns ## COG: NMB0265 COG0632 # Protein_GI_number: 15676189 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Neisseria meningitidis MC58 # 1 191 1 192 194 192 57.0 3e-49 MIGRLHGKLLEKNPPQILIDVSGVGYEVDVPMSTFCNLPEVGGELTLHTHFVVREDAQLL YGFATLAERAVFRALIKISGVGPKIALALLSGITVDQLKDAVDRGETGLLTKVPGIGKKT AERLVLELKGKLAGTGAATAAAAVPTSGARADVAAALIALGYSEREAAAATKKLPEDCTV NDGLRLALKSLTH >gi|319804635|gb|ADMF01000024.1| GENE 58 60763 - 61815 1070 350 aa, chain + ## HITS:1 COG:RSc0500 KEGG:ns NR:ns ## COG: RSc0500 COG2255 # Protein_GI_number: 17545219 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Ralstonia solanacearum # 5 336 13 344 357 475 75.0 1e-134 MSEDSSDRLIAGGCANPNEENVDRALRPTRLADYVGQKAVREQLQIFIEAARRRGDPLDH LLLFGPPGLGKTTLAHIVAEEMGVNLRQTSGPVLERPGDLAAILTNLEKNDVLFIDEIHR LSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTNPLRARFGI VNQLQFYTTEELITIVRRSARLLGVSIDPEGAAEIASRSRGTPRVANRLLRRVRDYAEVR HDGTITREVASAALTMLDVDPVGLDFIDRRFLLTILEKFSGGPVGIDNLAAAIGEDRDTL EDVVEPYLIQQGFLQRTPRGRMAAHRAWEHFKLTPPANQGGAVMRDATLF >gi|319804635|gb|ADMF01000024.1| GENE 59 61944 - 62378 301 144 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTQPDHEEQTEVIAEGRYRPKECASRQKRRAAAELFAAGIGYTKASRILDLPVNTLRDWA KAWKAGKFTEDISKHLYRYDDEVREKAVRMRLTGHTWRAIQNETGASAVSVRRWIEQYTS KGGRKKRLSLGQGDLEPSIRDRDA >gi|319804635|gb|ADMF01000024.1| GENE 60 62621 - 66907 5115 1428 aa, chain - ## HITS:1 COG:no KEGG:Ent638_0501 NR:ns ## KEGG: Ent638_0501 # Name: not_defined # Def: outer membrane autotransporter # Organism: Enterobacter_638 # Pathway: not_defined # 1123 1414 1036 1358 1371 97 28.0 4e-18 MSVVFAHSPARVQFHLAWVYKINLGVKTMNRTFKVAKSLTRGVVVTSEKASSYQGKAVKT VVAAAVASLVAGAAIAAKTPVDDIKLGADGALVKDSTNVTAVVTGTATVTYKDGSNIKTD KWDADKYNHTGTTTVTLDGGKIVVDATGYTDSQDFTMGKGSVTGNGTIAVTAGTKAAKLF LNKNSDGTGGALTLKKADITLAGTTAAAALEAQSTVTIEEGSLNFTIAGDAKTGTGSLIS GGAITLGKAADKENAATAVAINVAKDVTATVKSTDVIKLTNAAFANAGKLTLKGSQIALD SDFDDSTNAGTTVFDGATTLSKNFTGSVVEMADAATAAKDAKQVFTGDVTVGAGAAFAAD KLTISKDSTLSTTAAVTGENAKAAGSLNVSEAIVKTGTQHSFSGTETFGKLTIGDAAATT PTAAKITVAAGTLDVSDTLTVKGNAVKNESASTDGTATLALTGGVTTLKTASIGDFGVLS VTSTAKLNVTDTLTVAGSAANKTAAVTLAGENAAIANLVVNANGTVTASSRDKDLTITNL TVGNGGSFTVNGSYAMVEKLSVAKADTTNNKAAGTFTLTSGTLETTGDQIFTVDNTKTTL AEKLSLKDGLTTDSFTGGELVLVDETYNGKAIQYTLSDWQTVKAELGSSTDLVLLYGTLV GATGDDGVTAKASFNEAQTVGYTGKSAVLWKYGQAAAAATVSGKDLTVGSIEFTKADGYT GNLDSVSIKAGSGKTVSLLSDADQQVFIGALDKDGKPVAVTLENESTDSKGSFAFGDEGD YDNVGVVTNKVIAKTGVTVYDDFTFDAVELDGGFITVAGRMAAKDITSKANEVTTVQESG TLVLAGTAADPKKGEFGQQVAANVTIGGAEEGNSTAQNGALFVVGTADDEQAAQVYQAAH HLDNTLWVGQAVKFNGSVSFAQQNASGTWNGRDGVPGEKTVAIDLAALAQSGYTHSDKAV ITGLTVTPEKLVLANLQQVSKDTLGYNDYREQYFLNVGTAVSTRVDFGTEFYQESAANVI NGNAYFVVDEDTVKEVKALGLNSFGAVESAVRNLEFGQNEIADTVIFDLYGSVRKNAYLL AADEAYDKYREELQKAGKYPTGTSEDDAVARYKLEQEFYAPYVAELVKAEHAATNMAALG GAFTTALDINDQVTAAVSRRTSAQRVEGFTPWVDVFGTTNEAKRLYGNGAGYEADIYGAV LGFDYTAACGGTLGVAFNVGQADGNSVGSGAKVDNDADFYGVSLYGAQTFGDFNVKADLG YTQVSNDLSTNNVLGSYKESLDANVFTFGLGTEYLAKFGALNVTPHAGIRLSRIDMDDSK YGADYDAMTVYQLPLGVAFSGNFDVNGWKLAPMVDLSVVPAFGDKDAVATYTGGIQSVTR VVDTNPIQATLGVSAQNGAWTFGLNYGLTAGGDDRMNNAFNANLRYSF >gi|319804635|gb|ADMF01000024.1| GENE 61 67122 - 67622 -20 166 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAGCSRSEETVKTLTTKKSPRRSRCPAQAPEPMTTADGTVPARAFSRSANESSSRPILRS AKPKSLPASRCNQPKTHSKPDRHSKQIWESSAAPDSNAVRIIMFAEYPAEEPLAENPPKR LSAQALLPLRVKPHRALQSALDLLRSLGESRQSIFRQTGDNGGLSC >gi|319804635|gb|ADMF01000024.1| GENE 62 67955 - 68755 443 266 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 5 265 9 267 329 175 41 1e-42 MLELQHAAVRTAPKGFTQSLAAFVGRAVGRTILPDCTLRLHRAETLALVGESGSGKTTAA LTALGLLGNGLLAEGTVRCGGISMPVAGPRSPVFRRKVQIVFQDPFSSLDPRMTVGQILE EALVSLRPDLTPAERLLRMQALLKETGLAPESLECLPHEFSGGQRQRIAIARALSVEPEV IVLDEPTSALDVSVQAQILNLLGSLQRERGLAYLLITHNFAVVEHAAHRVAVMQGGRIVE EGAAAAVLTHPKAAYTKRLLASVPRL >gi|319804635|gb|ADMF01000024.1| GENE 63 68767 - 69846 703 359 aa, chain - ## HITS:1 COG:TM0501 KEGG:ns NR:ns ## COG: TM0501 COG0444 # Protein_GI_number: 15643267 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Thermotoga maritima # 42 298 13 271 327 277 50.0 2e-74 MPLILVPRAVATLDGGVLMNIQSEPSLLSVDRLTIDLPLSGGVLHPVRGVSFTVRRGEAL ALVGESGCGKSLTAMALMRLLPEDAQVPSGTVTLEGRELLSLTEKEMERVRGAGIAVIFQ EPATSFNPVMTVGDQVAEMIRTHLTCGRTEARARAVEWLRRVGIPRPEEAYDAYPHELSG GLKQRAMIAMALSADPKVVVADEPTTALDVTVARQVLELLNDLKRERGLTLIFITHDLAL LPGIADRVALMYAGEIVEMAPTEAFLAHPEHPYAQALLGALPRPDGAPLQPVEGSVPNLW GRSRAALLRRAVHGPSQSALNMRLLLSLGAMGWALCGASSRATRRPPNAGRSLRPKRRP >gi|319804635|gb|ADMF01000024.1| GENE 64 69806 - 71230 1172 474 aa, chain - ## HITS:1 COG:BS_appC KEGG:ns NR:ns ## COG: BS_appC COG1173 # Protein_GI_number: 16078205 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus subtilis # 228 467 80 300 303 132 32.0 2e-30 MLPVFLPTDFVAWGLFVLLILAVRHVRRSPELARRWRMVFARPSAAASAAVLAIFLLTAL MDSIHWRDALPPADASDAASAVQAYSPEVKSLLDVVILERLKAAGDERSYSMPFALREFD KTTVFKDGHAVRDFQPLKNAGKLFGHRTRTFELVKGTLIAAIAGGVTAFLAWIFTALAIA RRRNATFTQTLMVMRNRDGRFPWRPAMLVFTVAWLLMVWLILIWPNWHVFGTDAVGNDVL YEAVKSVRTAVVIGSLATLATLPFALTLGIAAGYFRGWVDDVIQYVYTTISSIPSVLLIA ASVLMVQVFLDKHPELYQTSLERADLRLMLLAVIIGMTGWATLARLLRAETMKLSTLDFV SAAKALGVKPFAVMRRHILPNVMHIVLIVTVLDFSGIVLYEAVLSYVGVGVDPTMHSFGT MINSARSELSRSPMIWWNLLASFLFLVTLVLSANIFASAVRDAFDPRAAGRGHA >gi|319804635|gb|ADMF01000024.1| GENE 65 71279 - 72256 1230 325 aa, chain - ## HITS:1 COG:MA3462 KEGG:ns NR:ns ## COG: MA3462 COG0601 # Protein_GI_number: 20092275 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Methanosarcina acetivorans str.C2A # 1 323 1 308 313 129 30.0 1e-29 MINYLLRRVVYGILILLGVNLITFVLFFAVNTPDDMARLNLGGRRVTADAIEAWKAARGL DKPLFINTAAEGVQKITDTVFFERSVPLLFFDFGRSDSGRDIGYEISTRMWPSLALAVPT FLLGLIVMVAWSLLVVLFRRTRVEAAAIGLSVFLMSISSLFYIIVGQWLFSKLMRLFPIS GWADGWGCTAFLVLPVLIALFSRLGSDTLLYRAMFLEEIGRDYVRTARAKGLSEGAVLRR HVLRNAALPIITSSVAVIPMLFMGSLIMESFFGIPGLGSYTIDALGAQDFSVVRTMVFLG TFAYIIGLIATDIVYAWVDPRIRLA >gi|319804635|gb|ADMF01000024.1| GENE 66 72256 - 74517 1839 753 aa, chain - ## HITS:1 COG:PAB0091 KEGG:ns NR:ns ## COG: PAB0091 COG0747 # Protein_GI_number: 14520360 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pyrococcus abyssi # 242 707 150 556 556 91 25.0 5e-18 MTAKTDPAHSLFSRRAVWAAAAAVLVFAALLFTLPDVTNNPRPLAEYGEKTLFTAFGGRS PRTLDPQRSYSSDETAYTYSIYEPPYQYAYLKRPYELEPRTVEKVAEPKYFDKSGKELPA DADPEAVAESRYVLKIRRGIFYAPHPAFAKDEKGAFRYHHLDADLAARVRSPFDLPEAGT RELTAADYANGIRRIASPQVVSPIYGTMSSRIVGFPDFKKRLDAKWRAMREAGASEETFF DLMAEPLEGVQVIDDHTLEIRIHGKDPQFAYWLAMTFFAPMPQEAERFYAQAGLRANNVS LDTWPVGTGAFRMQTFRENRLHVLERNPLYKHGFYPCTGEPDDEKKGLLKDCGKPLPLVD RVVFEVEKEAMPLQSKFLAGYYDSPFIDRVDTGLGYLVAMDDDPDKAALYGGRGLKFPKT VMAGLWYLGFNWLDPVVGGGSTPEEAERHRALRQAISIAVDWEENIAIFQKNQGMPAHGP IPPGLFGWRADGPEAFNPVVYEKHNQQVIRKPIERAKELLAKAGWPDGRNAQTGEPLVLF FDYQNAAQGSSAYLEWYQRQFKKLGIQLEIRATDYNRFQEKMSKGAAQIFFWGWNADYPD AENFLFLFYGPNGKVAHEGENAANYENPAFDQAFREMRLLEDGPQKAALIDRMVEILQQD APILFGYFPPAAAAYQSWVENAKPSGLVQNALQYYDVDADLRLAKIREWNRPVLWPLAVL ALGIGLLVWGALAVLARRQARRLRPLKSNGRSR >gi|319804635|gb|ADMF01000024.1| GENE 67 74849 - 75274 508 141 aa, chain + ## HITS:1 COG:RSc0731 KEGG:ns NR:ns ## COG: RSc0731 COG0824 # Protein_GI_number: 17545450 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Ralstonia solanacearum # 7 135 5 132 134 112 44.0 2e-25 MPEFTAEFPVEVYWEDTDAGGIVYHSNYLKFMERARSNLLKELKVAQANSLTDPDGVLFV AVSVAIRYRRAAKLEDHLTVRTRIKTLRRASIVFEQNVYRGSELITEGEVRVGAVSRRTM APAAMPESLYEKIRALLDLAD >gi|319804635|gb|ADMF01000024.1| GENE 68 75310 - 75981 955 223 aa, chain + ## HITS:1 COG:RSc0732 KEGG:ns NR:ns ## COG: RSc0732 COG0811 # Protein_GI_number: 17545451 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Ralstonia solanacearum # 1 223 4 230 230 226 56.0 2e-59 MNTTADLSILTLIANASLVVKAVLAILIVLSLASWTVIFQKFFVVRRAMRQTDDFESRFW SGTELTKLLDTANRSRDTSGMEERIFAAGMNEFMKQRQTAGAADTVNSVSRAMRAVFTRE MDRLENGLPMLASIGSTSPYIGLFGTVWGIMNAFTGLSSLENASLAVVAPGIAEALVATA IGLFAAIPAVAAYNYYNNRVGRLSNRVDGFSEEFLNILERQSR >gi|319804635|gb|ADMF01000024.1| GENE 69 75999 - 76430 450 143 aa, chain + ## HITS:1 COG:RSc0733 KEGG:ns NR:ns ## COG: RSc0733 COG0848 # Protein_GI_number: 17545452 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Ralstonia solanacearum # 15 137 16 144 144 79 45.0 2e-15 MALSSKSRRRGLMAEINVVPYIDVMLVLVVILMVAAPFVNPSVVNLPSVNKASKAPEKVV EVVVYPDGRLSLRAGKEMQPTDMPGLVAAVRSAQAGDAKVPVVIAADKDVRYEDVVNVMK LLQSAEVERVGLSLKVERPTAAR >gi|319804635|gb|ADMF01000024.1| GENE 70 76453 - 77715 1464 420 aa, chain + ## HITS:1 COG:NMA0905 KEGG:ns NR:ns ## COG: NMA0905 COG3468 # Protein_GI_number: 15793871 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis Z2491 # 87 312 966 1218 1773 80 33.0 7e-15 MSIKPPISGFNREHQADRRDMFPAALLSVAVHGALFVGLFTAFQWNTSEEAVYAELWAPE EISGGNDPSGVAEKLPEVKSKDTEEQQEQKAAAPEPNPPAEPPPTAQPEPAQPTPEDIAR EKAQEAQRIEEEQIARAAQEELEARRQEAERIAQERARAEEIERMRQEAIEAEQRRLAEE ARREEEERIAQERLAEQAKRAEEERQAEEARRQEAARLAEEARKAEEAKKAEEERRAAEA EAKRIAEELKREEAERQAQEAAQKAAAERQAREAEQAKRRIAQQARERELARLAAKIDPN AQRSGTTRGDQRNFRRSLTGSALATWSNRVRACIRPNILFDVPVNTPRGRYVAEYQVRLQ SDGKQIGSPELKKSSGLSAYDTNVLRAIRLCNPFPQPTGGEAIPSVLTITFDPVDDTAGK >gi|319804635|gb|ADMF01000024.1| GENE 71 77833 - 79581 1985 582 aa, chain - ## HITS:1 COG:RSc2816 KEGG:ns NR:ns ## COG: RSc2816 COG0442 # Protein_GI_number: 17547535 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 559 1 553 574 758 67.0 0 MRARSFFISTLKEAPADADVISQQYMIRSGMIKKLAAGVYTYMPLGLRVIRKIENIIRDE MVRAGSIELLMPMVQPAELWQETGRWEKYGPELLRIKDRHMRDFVLQPTSEEVITDVARQ EIKSWRQLPVNFFHIQTKFRDERRPRFGVMRGREFTMKDAYSFDRDEAGAGLSYDKMYAA YQRIFTRIGLVFRAVRADTGSIGGSRSHEFQVIANAGEDVIAYCPDSDYAANIELADASS VLDGRKAPTAALEKRATPGKEKCELVAEYLGLPLLSCIKSVVLAADRTNEKGEPLPAKIV LVLLRADHELNEVKAGHIPELKDGFRFATDAEILAAFGSKPGYLGPVGVKSDIAVYADKT AADMSDFCCGANEEGFHYSGVNFGRDLPEPVVMDLRNVVEGDKSPDGKGVLRLQRGIEVG HVFFLGTRYSEPMHATFLDENGQPKPMQMGCYGIGVTRVAGAAIEQRHDDKGIQWPDAIA PFEVVICPMNYAKSEDVRKAADALYEDLKARGVDVILDDRDMRPGVMFAEWELIGVPHRV VIGDRGLKNGEIEYAERTNLAEKTMVPVADAAAFIVGRIKRD >gi|319804635|gb|ADMF01000024.1| GENE 72 79707 - 80834 1180 375 aa, chain - ## HITS:1 COG:RSc2819 KEGG:ns NR:ns ## COG: RSc2819 COG0263 # Protein_GI_number: 17547538 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Ralstonia solanacearum # 6 375 5 374 374 421 67.0 1e-117 MVGQESLLKEARRIVVKVGSALVTNDGRGLDVRAIERWAGQIAALRAMGREVLLVSSGAI AEGVLRIGWETRPTRVCELQAAAAVGQMGLAQAYEEHFGRHGIKTAQVLLTHANLADREQ YLNARMTLIELLGLGIVPVINENDTVVTEEIKVGDNDTLGALVTNLVEADVLVILTDQRG LFTADPRSNPDAEFVQFAQAGDPALEKMAGGAASTLSKGGMITKILAAKRAARSGAGTII ASGREENVLVRLAQGEAIGTHLSPASSVLHAKKQWIADHLRAAGRLVLDSGAVRALKRDH TSLLPVGVKAVEGEFKRGEMVVCVDEAGCEIARGLVGYSSTEARRICRAHTDEVMQILGS MDAPEMIHRDNLVVL >gi|319804635|gb|ADMF01000024.1| GENE 73 80923 - 82020 891 365 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 347 1 339 345 347 53 2e-94 MKFVDEANIEVQGGKGGNGAASFRREKFIPKGGPDGGDGGRGGSVWAEADRNINTLVDYQ YTRKFFAPNGENGRGADCYGAGGKDVVLRMPVGTIIRDTDTGEIVADLNVHGARQLLAAG GKGGLGNLHFKSSVNRAPRQFTPGEPGQYRSLELELKVLADVGLLGMPNAGKSTLITAVS NARPKIADYPFTTLHPHLGVVRVGPEQSFVLADVPGLIEGAAEGAGLGHLFLRHLSRTKV LLHVIDAAPLDDTVDPFEQAHALVAELEKYDPELAAKPRWVVLNKMDLVPEEERDALVEK FRSAFAREGEPVFAVSAATREGLTTLLNALAQKVDEDRRAERAFLDDERFDEERENAEPY DPAAH >gi|319804635|gb|ADMF01000024.1| GENE 74 82178 - 82441 332 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226946115|ref|YP_002801188.1| ribosomal protein L27 [Azotobacter vinelandii DJ] # 1 84 1 84 85 132 76 1e-29 MAHKKGGGSTRNGRDSKAKRLGVKVFGNAAINAGSIIVRQRGTQFHAGNNVGTGKDYTLY ALVDGTVKFEVKGAFGRHYVHVEPTAL >gi|319804635|gb|ADMF01000024.1| GENE 75 82480 - 82791 328 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|53803715|ref|YP_114664.1| ribosomal protein L21 [Methylococcus capsulatus str. Bath] # 1 103 1 103 103 130 58 3e-29 MYAIIKTGGKQYRVNVGDTLKVELLGQDAGSQVTFSEVLAVSGEEGLKVGAPLVEGATVT GTIVALGRHDKVRIFKFRRRKHSMKSGGHRQHFAEVRIDAINA >gi|319804635|gb|ADMF01000024.1| GENE 76 83120 - 84118 884 332 aa, chain + ## HITS:1 COG:RSc2823 KEGG:ns NR:ns ## COG: RSc2823 COG0142 # Protein_GI_number: 17547542 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Ralstonia solanacearum # 17 330 6 320 322 297 53.0 2e-80 MTQTASSTDPKVLVQRLLAPIADDMKAVDDYIRAELASDVSRMHEISEYITSAGGKRMRP ALLILISRALGYKGDLCCYLGATIELLHTATLMHDDVVDESNLRRGRPTANARWGNGAAV LVGDFLYTRSFQMMVRAGNLRVMQALADAANRLSEGEVVQMVNAHDPSVDETRYFRVIER KTACLFEAGARMAAAIAECSKEQEEAVAQYALALGNAFQIADDILDYTGVAADIGKNLGA DLREGKMTLPLIYTRELTTPEGRALIDEAVRKGDGPFDKITKLVVDCGALDRCSLRAEAE LERGRQALAKLPPSIFNESLLELLSFTVRRDR >gi|319804635|gb|ADMF01000024.1| GENE 77 84296 - 84922 499 208 aa, chain + ## HITS:1 COG:RSc2828 KEGG:ns NR:ns ## COG: RSc2828 COG0237 # Protein_GI_number: 17547547 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Ralstonia solanacearum # 6 188 3 190 204 127 42.0 2e-29 MQMCWILGLTGGAGSGKSTAADIFRELGHPIIDADRISRAVTAAGGAAVPAIRQAFGPEM IEISGAMNRARMRELVFRDPEARKKLEAIVHSAMKQVLDDEFACAKRSGAPFAVYDCPLL IESPQARARVDRILVIDVPEYLQVERLGTRSGLAPDAALRLIRAQTSRRNRLQAADDVLV NAGTREDFACRVRHYALRLWGAAEKHLL >gi|319804635|gb|ADMF01000024.1| GENE 78 85040 - 85807 616 255 aa, chain + ## HITS:1 COG:RSc2829 KEGG:ns NR:ns ## COG: RSc2829 COG4582 # Protein_GI_number: 17547548 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 6 254 1 250 252 186 40.0 4e-47 MPDTGLILYEFPCSEKIRFYLRLEALKQRLDWFLTLDGKAAHQAAINALFDLSDVAARSD LKNELLKALLQQRRDIEALPANATVDGQPAKTVLALVSEAANSVSAAVGRTSQILRDNEW LQLIRNRQRLPGGTCEFDLPQLHYWLSQPAEIRRQELLSLAQTLLPITNAAQLILDHLRA QTIISDAVAEHGTMQIPTSGSPYQLARIWMPQESQCIPDMSANRHTLWLRFSTPDAKHRL HAVHETLSFRLGLCI >gi|319804635|gb|ADMF01000024.1| GENE 79 85880 - 86134 191 84 aa, chain + ## HITS:1 COG:no KEGG:Maqu_2688 NR:ns ## KEGG: Maqu_2688 # Name: not_defined # Def: hypothetical protein # Organism: M.aquaeolei # Pathway: not_defined # 1 66 1 61 62 67 51.0 2e-10 MKVPCPVCHTLTEYSSANPWRPFCSERCKMIDLGEWANDGYRIEGEPGSADRMSPEELDA AADRARELEERQRSAKTNGARRRR >gi|319804635|gb|ADMF01000024.1| GENE 80 86171 - 86896 804 241 aa, chain - ## HITS:1 COG:RSc2831 KEGG:ns NR:ns ## COG: RSc2831 COG0494 # Protein_GI_number: 17547550 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Ralstonia solanacearum # 19 116 24 121 153 119 60.0 7e-27 MRAREPRANYWRFSVSDNIVEVAVGVLIREDGRMLLSSRPEGKPYAGYWEFPGGKLEKGE TVHQALARELNEELGLAVSYSTPWFVKEHRYPHAHVRLHFRRSHDFAGTPVPKEGQQCGF YAADERTPGLMLPVDQVIVNRVELPEVFEESDNLLTLTREALAATVVRDRRYRWVGARAE TMDEVLKCVAMDYDFVIVPPEKFESLLLNGEPRLPMYVDGAAAADLETWQAKGAHGVKPL I >gi|319804635|gb|ADMF01000024.1| GENE 81 87003 - 87800 571 265 aa, chain - ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 89 265 74 249 250 153 42.0 4e-37 MEAEMTNFSRRQVLSLPMAASVVGAGAAGAAYAADSNSKVNAPDFDAIEDRMTLLTKRGA SLSIRQKHLAVLSVAAGLGFEDLGERTAAAALADGLAPGDIEEAVFHASPYAGMARTRAV LAGVHTAMTAAGIALPLESRTVVSDENRLQKGIAVQTEIFGEQITRMHQTTPAERRSLMI DDLSGWCFGDFYTRKGLSIAERELATFCTIAALGGCEAQLSAHAAANLRCGNTKDNLIDA LQCAVVYLGFPRTLNACAVVDKVNP >gi|319804635|gb|ADMF01000024.1| GENE 82 87920 - 89068 445 382 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNSAASHHQLPRFALPGAVWRSAGDFWCAEFTPPARWTVATGAMLGSAYPDDGAAERLVQ AAQKVWTGAGSRLLITAGSGCAGRGDLSTAAAQGFAHAAAERLGIAESNLLFASAGPVFM HFPVGEELRRLERAMSAQKTISPEGPGADSVSIPFRLTDGAVAVSAARFFAPNPGFGSMV WMAGIDADVGRPVLEDMARPLWLAGPEALRARTGPVPGDVLLLFSTAAHHDNPVMRWEDP RRAPLEAALSAALGVLARRAGAAIGALPCVLEGADSAQEAVHAARRLAPALVVFRCELLE LAESDRPRVLSEFLRSVLLTTGIAGFERTPVSVRIANALLYEGLRQPEQSGANIEAVHAW LEGSEELSIHLGRGRLGFRFWA >gi|319804635|gb|ADMF01000024.1| GENE 83 89200 - 91995 3083 931 aa, chain - ## HITS:1 COG:RSc2834 KEGG:ns NR:ns ## COG: RSc2834 COG0653 # Protein_GI_number: 17547553 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Ralstonia solanacearum # 14 930 1 933 934 1151 64.0 0 MTADAATQNSSENMFDELLTKIFGSRNERLIKQYRRQVAAINKLEPAMEALSDAELQAKT QEFRDRIAKGATTDELLTEAFAVVREASKRVLGMRHFDVQLIGGMVLNDGKIAEMRTGEG KTLTATLAVYLNALAGKGVHVVTVNDYLASRDADWMGRLYNWLGLSVGKILSQQDTAVKK EAYAADITYGTNNEFGFDYLRDNMEYDVSARRQRGLYFAIVDEVDSILIDEARTPLIISG PADDNTDLYLRINEIPPLLTRQQEEKGEGDYWVDEKAHQVYISESGHVKLEKILAERGLV GPGESLYSPKNIILMHHLMASLKAHTLFKRDQQYVVQDGEIVIVDEFTGRLMPGRRWSEG IHQAVEAKEGVRIQHENQTMASITFQNYFRMYEKLSGMTGTADTEAYEFQDIYGLETVVI PTHRKMIRIDEQDKVYRTVAEKYQAIVEDVKACHAKGQPVLLGTTSIENSELLSQLLTKE GIEHNVLNAKQHEREAQIVLDAGRPGMVTIATNMAGRGTDIVLGGGINKAVGAIEADETL SAEEKAQRIAEVKSQWQKLHDEVVAAGGLRIIGSERHESRRIDNQLRGRAGRQGDPGSSC FYLSMEDQLLRIFGGDRMRAIADRLKLEPGVAIESKMLTRMIESAQRKVEGRNYDIRKQL LEFDDVQNDQRHEIYGLRNEILEATDCSELIKNLREGYFTDLFRSFVPADTVEEQWDLDA LNDKLKSGFGIEIDFKKMLDADTATTDEDLLKALIDRANEIYEAKETLVGHDAFAAFGRS VLLQVIDQLWRQHIAALDALRQGIYLRGYAQKQPKQEYKREAFTMFEQLLDSIRETTTTV LMRVEIKQPEEAQAAAQDNLARGEARADASHLADADASQGLNAPNDQGSSLDQLSADENA RLQAAFRHCGRNDPCPCGSGKKFKDCHGRLR >gi|319804635|gb|ADMF01000024.1| GENE 84 92340 - 94718 1748 792 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPRLRSLPAGFTLRNRGFRSPEKSLAESSASGKLLAEYELACRAGKAIMPLIDQLRLPLD FSSGRGVRINTQGTITFITDSAAQQSRLRNLSKRILENLITAGVPVVAVDFRNRGRRSTL NEAEKPEPIRTPSLIAAAELESSAARLINPDLKHQILALAAVLRPRPEEMPLAVETALEG TIERIDRLIGRTDRIKTLLPSAPDAKLIPDEASAKANPVLAAVRSRQRARLARRTLAETE TNQIAEEARQALALLKTAREKLMPPAAEEAAAELPFELSSKVLDDAGQSAVSAALKIAGW TARLNQVEDRLTLPLEEAVQTLAAKGTPPAAASPSLPNAGTPEELSPAVLRSELKRKIKV LQSKLSETLSQIRHIGVRMPELPDILAADSRLAQEAADLARAREKGDSQALAVALSAESS RKLLSWESRLEVKSRLDTLEQTLAAMSKRFLADRPWLLAPRSKYADERPETMETLRKIDR RLINEEEALSSMSAEIETLAEKVEILRGDLPDDALSGINPLEGALLESLKIVFARLRSLE AVLGGRLNESIIPSEAEAEADPQLAAIRARQLARLKTWDNRAALLAAAEQSAAAVDRVLT APRGEGLSPELAAMLERAAAEVVERFEAARAAIDPDAKPLELPDLFGAPIPADEKSESAA PHASQTARAAEDAVQAAAEAEEAQQLELRTKLEELLTIIPIWADRLPRMPDPKLIPNEAE CAGNPQLSELRSRMLSRRSRREDLQARLSSLHEAALKLRERLGNPLADAAETGRYAAALM RDADRFSADLGK >gi|319804635|gb|ADMF01000024.1| GENE 85 94779 - 95726 851 315 aa, chain - ## HITS:1 COG:RSc2837 KEGG:ns NR:ns ## COG: RSc2837 COG0774 # Protein_GI_number: 17547556 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Ralstonia solanacearum # 1 299 1 299 305 333 59.0 3e-91 MFCQCTLAESVAAVGIGLHSGRKIRLVLHPAPEDSGIVFRRVDLNPPVDIPAAPMNVNDT RMATTVNVGRAAVATIEHLMSAFSGLGVDNCLVEVNAPEIPVMDGSGAAFVYLIHSAGLV EQKAPRRFVRILKPVEVREGSKLARLEPHEGFRLSFRIAFGHPAIDATDQYADIDFSKVN YEQAVSRCRTFGFVQDVEMLRKIGLAQGGSLSNAIVMDEFRVLNPGGLREQGEFVKHKIL DAMGDLYVLGAPLLAHYIAEKSGHGLNNQLLRALLADPSAFETVTFEHAKDCPVDFWPQP AAVRPEAPDDGKLPF >gi|319804635|gb|ADMF01000024.1| GENE 86 95740 - 96897 1287 385 aa, chain - ## HITS:1 COG:RSc2839 KEGG:ns NR:ns ## COG: RSc2839 COG0206 # Protein_GI_number: 17547558 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Ralstonia solanacearum # 14 384 14 395 400 295 50.0 1e-79 MPFEVLPEFDPLKTVIKVIGVGGGGGNAVEHMITHGAKSIEFIAANTDHQALQRSKAHVN IQLGSTGLGAGARPEIGAAAAQEKREQVAEAIRGANLLFITAGMGGGTGTGAAPVIAEIA KELGILTVAVVTKPFSFEGARRMRTAEQGIENLKSKVDSMIVILNEKLEEECPPNATMKE CFETSNEVLYKACVGIAEIIHTPGTINVDFEDLKTVMSERGSAIIGLATASGPDRARKAA EAAIACPLLEGANLQGARGMLVYFTGNESLTLAEIREAMGVLNTFVTKQANVIFGSAMSE EMGDEVRVTVVATGLDRPIDPTTTVDTTSPAAAPAIGQPASAAEASQPSSDEPPTIFGTP KTEKKTDEEAAQTGAPKFSIPKYLS >gi|319804635|gb|ADMF01000024.1| GENE 87 96974 - 98212 1134 412 aa, chain - ## HITS:1 COG:RSc2840 KEGG:ns NR:ns ## COG: RSc2840 COG0849 # Protein_GI_number: 17547559 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Ralstonia solanacearum # 8 412 6 410 410 183 31.0 6e-46 MKSQDHGREFFAALDIGTDKVLCIVARPGAEPGSMRVIGMGNARSSGVQEGCVVDVQEAV QSIRKAVQEAQYTAEVQLSGVWAAIGGKYLQSANCVGQTVLRGQEVSREDVEQAESNARL AAMREGKGSTVIKLIPQGFRCGDVMTARPIGLVGPKLEAYVHALYGSKTNADNLKRCIQR AGVEVINYEPHPWAAAQAVLSETEKTCGAAVIDIGAQTTSIIVMAEGRVQFTDVRPWGAE IFTRDLAMVLGISLEEAEELKRNSGECRLSQVIAGEVVQFESHGALSRLYSRDLLVKTLA ARAQEYFHLYRQLLIDARAFDHVELVVLTGGGAMLPGIADAAAAEMGKRVRIGLPRRAEG ESALLQRPDSVVAAGLVQCAIDAGALGVENAWGVRRRQGFRERLKTFFIGDY >gi|319804635|gb|ADMF01000024.1| GENE 88 98284 - 99465 621 393 aa, chain - ## HITS:1 COG:STM0131 KEGG:ns NR:ns ## COG: STM0131 COG1589 # Protein_GI_number: 16763521 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Salmonella typhimurium LT2 # 83 314 23 255 276 81 27.0 3e-15 MDVPQTERTDAAGNPLRQIPLPQDSLGRQEPTLAARGKRAAADNLHVGSRTPEFADELPP VPRERLGAAERMRYGLRRWGLPAARVAGLLTVLILGALVVREAADGRIFMLQRLEMTGDV QKVPLARLKEAVEPAAAGKTFFTVDLKAVRDAAETVPWVQYAAVRRVWPDALMIDVTVYE AAAVYEDGRLVSGEGQLFSANPDEGSETAGAPTFRGEAQAVPEMLRRWRRFSGLTEHIPA KITELELSDRGSWTLTIESPTIPPTKIELGRDANGAAVEERLRQVVEAYPRIVEIMGGPP ASLDARYRRAIAAGKVNREQVAEYLASVQAVSAQSSARPSLGDADGAADAAAEAEASSSK DSVDDIEAASAADDAADAASSESHETEGGAAAR >gi|319804635|gb|ADMF01000024.1| GENE 89 99489 - 100448 1013 319 aa, chain - ## HITS:1 COG:RSc2842 KEGG:ns NR:ns ## COG: RSc2842 COG1181 # Protein_GI_number: 17547561 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Ralstonia solanacearum # 9 318 17 322 331 245 46.0 1e-64 MTQAEEPRLERVVVLEGGISSEREVSLLSGRGVKEALASKGLEVESWDPAVDSVGGLEEG AYDAAFIALHGTLGEDGSVQGLLNCIGLPYTGPGVTASAIAMDKELTKNIWRANGISVPA GVRLTAAASDAELERAIAEFGADGVVVKPGHDGSSIGVTKLDRDALSLHSLRAALNAAAE RDAAEVLVEEYIHGREFTVAILDGKALPVIEICAPEGSYDFQNKYYTDVVRYECPAKLPE ASAKALAAACEKAFAVLGCRGWSRVDALERADGTFALLEINTSPGMTPHSLVPMAARAVG LSYADLCLRVLGLARTDIA >gi|319804635|gb|ADMF01000024.1| GENE 90 100474 - 101871 1201 465 aa, chain - ## HITS:1 COG:RSc2843 KEGG:ns NR:ns ## COG: RSc2843 COG0773 # Protein_GI_number: 17547562 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Ralstonia solanacearum # 1 464 1 465 483 556 64.0 1e-158 MKFLVNHLHFVGIGGAGMSGIAEVLLNLGYVVSGSDIAASPVTERLQSLGARISLGHDKK NIRGADAVIVSSAVKADNPEVTAARELDIPVVPRAVMLAELMRLRRGIAIAGAHGKTTTT SLTASLLAAGGLDPTFVIGGKLNSAGANARLGTGEFLVAEADESDASFLNLTPVIAAVTN IDEDHMDTYGHDFEKLKSAFVDFLGRLPFYGVAVLCMDDDNVRSIRPRVTKPVIGYGLSH DATVRAIDVTADGTRMRFTVLRPDHPPLPVVLNLPGVHNVRNALAAVAIATLAGVKDEDI KRGLAEFKGVGRRFAQWGDIPIQDADGRITGTFTLIDDYGHHPHEMAATLAAVRGAWPGR RIVVAFQPHRYTRTRDCFNDFVKVLEDVDGVVLANVYPAGEAPIPGADSHHLAEAIKASG RSEPVVVDVDQVPDAVRSLVEPGDVVVTMGAGSIGRAAPKLAGRL >gi|319804635|gb|ADMF01000024.1| GENE 91 101913 - 103049 936 378 aa, chain - ## HITS:1 COG:RSc2844 KEGG:ns NR:ns ## COG: RSc2844 COG0707 # Protein_GI_number: 17547563 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Ralstonia solanacearum # 14 372 11 365 365 256 42.0 5e-68 MTADNKQQTAADGRTLVIAAAGTGGHVMPGLAVARVMADRGWKIVWIGTTTGMEKGLVER QGIEFHPLNFQGMRGRGITGMITGGIKMLKAIWDARKLLKKLRPTAVFSTGGYIAVPVCF AAQNLKRPIVLMNCDADLLMSTNTVLPFCDALACGFAGGARTFAGIKGHTTGNPVRAEIA ALPAPAERFAGRTGPLKLFIFGGSLGAQVLNDVLPQALAMIPESERPIVLHQTGRDRDAA VREAYAKAGVAAEVVPFIDDMAARYRESDLVLCRSGATSCSELCAAGAAAVLVPFIAKTT KHQLGNAKYLADRGAAWLVNQADFTPQAVAKLISGMTRESLLEHAQAARAIAAPDAAAKV ADLIEEVVARRAPKIPKA >gi|319804635|gb|ADMF01000024.1| GENE 92 103046 - 104218 1059 390 aa, chain - ## HITS:1 COG:RSc2845 KEGG:ns NR:ns ## COG: RSc2845 COG0772 # Protein_GI_number: 17547564 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Ralstonia solanacearum # 26 390 48 413 413 358 50.0 1e-98 MRRLDSDWGADQRSSPGLNWEVIICTTALVCFGTVMVFSATSSMGAGGLGDSANFGEVKR HLMSILLALCAAAVVYRVPMNFWYRHSTWLLPVGLLLLASVFLPVIGKSVNGARRWLQLG PLSIQASEMVKLCALIYAAAFTVKRQEYMHSFSKGFFPMAIVMVIIAFMLMQQPDLGATV VVSVVIMGVLFLGGLSMKIFLAVGTVIVAFVALMIFMTPWRLSRVLAYLDPWSDEYVLGQ AYQLSHSLIAFGRGELFGVGLGGSVEKLNYLPEAHTDFIMAVVAEETGLVGVILILFIFY WLIRRTFEIGRQAIKLERFFPGLLAQGVGLWFGVQAIINIGVASGAFPTKGLTLPFVSFG GSSMLSSMIAIGLLLRVDRENKILMRGGQV >gi|319804635|gb|ADMF01000024.1| GENE 93 104239 - 105765 1390 508 aa, chain - ## HITS:1 COG:RSc2846 KEGG:ns NR:ns ## COG: RSc2846 COG0771 # Protein_GI_number: 17547565 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Ralstonia solanacearum # 24 495 59 539 546 330 46.0 3e-90 MLEAEDKSFITLNAAEGAGRSAWVLGLGASGRAAAQYLNDHGWRVHAFDTREAPAGLDAF CKAVPGCEMTLGGFPETTAPGVELVVMSPGVSPYFGAAASVCASARKAGIPIVGEIELFA QELAYLKRTQGYAPKVIGITGTNGKTTTTTLTTKMAAAAGLYAVAAGNIGPNAVAELSKA EAAGALPDIWVLELSSFQLETTHTLNCTSAALLNITEDHLDWHGSIEAYAHAKGRIFAPD TVRVVNREDPLVMAELEKVDDREHSAARCFTFGATKPQKEGELGLMMAAHASQGYWLGLR DQMEVDVLFLPEFELLIRGRHNAMNALAALGLITGAGIETRPAIGVLRTYRGEPHRVELV RTIEGRDFIDDSKGTNVGAVAAAVCGLAAQGRRILILMGGDGKGQDFTPLAKELKGRVAF AALIGRDAAKIREAVSPAGVATETFKTLEAAEDWLWEKSRPGDQILLSPACASWDMFRDY AERSERFKAEAAKIADHVVPKADEAVQG >gi|319804635|gb|ADMF01000024.1| GENE 94 105813 - 106949 1340 378 aa, chain - ## HITS:1 COG:RSc2847 KEGG:ns NR:ns ## COG: RSc2847 COG0472 # Protein_GI_number: 17547566 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Ralstonia solanacearum # 3 377 12 388 389 405 60.0 1e-113 MLNFLFSSPADSLALRALLAFLTALVIGLACGPALIRELKKLHFGQAVRTDGPKTHLAKD GTPTMGGALILAAITLSTLCWADLGNRFIWVVLFVTLGYGAIGWIDDYRKIVHHDPHGMS AREKFSWQSVIGLAAAFYLALALAVEPGGTFAEAIGAWYDARFPLDVTANIHLYLPLWTD WAFPLGLIGFIVFVYIVIVGSSNAVNLTDGLDGLAILPTVLVGSALGLYAYAAGNPDFAG AAYAAAAPHIPGAEELAVLAAALAGAGLAFLWFNAHPAQVFMGDVGALALGGCLGTMAVV ARVELILAVMGGIFVVETLSVMIQTTYFRFSHGKRIFLMAPIHHHFELKGWQETQVVVRF WIITFILTALGLSVLALH >gi|319804635|gb|ADMF01000024.1| GENE 95 107001 - 108422 1173 473 aa, chain - ## HITS:1 COG:RSc2848 KEGG:ns NR:ns ## COG: RSc2848 COG0770 # Protein_GI_number: 17547567 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Ralstonia solanacearum # 37 467 27 460 482 236 41.0 7e-62 MQAETEVIPSEHESFKWLLEALCDELVEVHGDPANEDASWIRVVTDSRIVRAGDVFVALS GERTDGHRYLLQAAESGAFCLVVEHVETGLNVPQLVVENSRRAYGLIARAWRRRFGIALT AVGGSNGKTTTTQMMKAILAAHWGVQNIHATEGNFNNDVGVPHTLLGLHCGCRAAVVEAG MNHRGEMARLADWIRPTVVLMTNAQREHQAYLETVAEAAFENGLLIAALPNDGVAVYPAD DPCADVWASYALARGVRTLTYATAEGVAADVRGELVPGKGLRLLAYGIDRVIGLQVQGAH NIHNAVGAAAAALAQQIDVDAIAEGLAAFKALPGRGARMASPAGFTLIDDAYNCNPDSAI ASIAMLAEEKPARIFLFGDMGELGRDAELWHAEVGGAAKTLGIDYFWAAGPLSKHAAEAF GIDGVRGRWFADRDELIAHLPELPLKGATVAVKASHSSGFGKVVETLKHFPAF >gi|319804635|gb|ADMF01000024.1| GENE 96 108508 - 110040 1307 510 aa, chain - ## HITS:1 COG:PA4417 KEGG:ns NR:ns ## COG: PA4417 COG0769 # Protein_GI_number: 15599613 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Pseudomonas aeruginosa # 22 500 21 479 487 324 44.0 3e-88 MDQTIKDSVAWLKDLAHPGAHLRLDSREVKPGDIFCAVPGEKVDGRTFIRVAAARGAAGV IYEAETSQRPEHYPLPAKPVEHLRERLGEIAARFYDEPSAHMTGVAVTGTNGKTTTTFWT ASLLTALGSPSGIIGTVGVFFAGRQIPAPHLTTPDAASLQGILKDLEETGAKSFVMEASS VGLDQGRMKGTHFKVGVFTNLSRDHLDYHQTMEAYGEAKGLLFAWPGLKAAVLNASDAWS RKYADAAQKNGSEIWVTGLEGEAASFGQAFGAAHVLEAKQIEPSHRGMRFTLVCDKREFP VELHALGTFNVDNALEAAAAAAACGHPIEKVVRALEALTPPPGRMQIFESDGMPLGVVDF GHTPDALEKAIECLIPNARARGGRLWTVFGCGGDRDAGKRPIMGEIAARLSDQVIVTSDN PRTENPQAIVDAIMQGVQAVPGADQRTMAVVDRREAIHRAVFAADAKDIILVAGKGHECE QILNDGPHHFVDGEVLREAFNECRAVRSRK >gi|319804635|gb|ADMF01000024.1| GENE 97 110074 - 111888 1667 604 aa, chain - ## HITS:1 COG:RSc2850 KEGG:ns NR:ns ## COG: RSc2850 COG0768 # Protein_GI_number: 17547569 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Ralstonia solanacearum # 25 589 11 574 595 510 48.0 1e-144 MTNFMKRAADAVVDKLLELMQRDRAAQEAKPKSAESPLIVIPIPKWRTYFALAFITVFFL GLVCRAVWLQAVTTDFLQDQGEARYARTLTIAGERGEILDRNGVVLAASQPVRSIWADPA FAKKLSADDFKKLADVLQMKPKEVRDKIFKAKSKNFTYLARTQDVRTAEAVRLLKLPGIG VSPEVLREYPDGPAVAHVVGFTGRSDHGQEGIELARDKDLTGVPGARRVIRDARGRIIDD IWQKEAVPGHDVVLSIDSRVQFLAFQALKAQVEKSEALAGAAVVADVQTGEIIALVNVPS YDPNDRSTMLFEQMRNRVLTDQFEPGSTLKPFAIAKALDMGIVGPKTTIQTAPGKLTIGD RTIGDTHDYGLLTVSEIVAKSSNIGTVKIALEMSPQTLWDMYTALGFGRAPAMGFPGAAS GRLRPAKTWRPIEQATIAYGHGISVSLMQLVRAYTALARTGDVIDLTLYKRPEGELPKGE QVYRPETVRLIRAMMMKTMAAGGTASTIKVAGYTVAGKTGTANKVKNGRYTNDTVASIVG IVPAVNPRFIVAVMIDEPKKGSRFGGRAAGPVFSEIAESTLRMLMVSPDRESVSGGGFLA KIRN >gi|319804635|gb|ADMF01000024.1| GENE 98 111885 - 112307 302 140 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRPVTRAELLWTVVLGIVLVGSAFCLVDLHFQMRQLFVAHEHEMDVHRRLLDDQAELEMK VRRASLPGSISAGAAMLDLSGATGADTVTLVEAPDGRIDFLPEVRRELDALTTNGDAQKS KADPKNAQPSVRGAGAGGRS >gi|319804635|gb|ADMF01000024.1| GENE 99 112311 - 113258 647 315 aa, chain - ## HITS:1 COG:ECs0086 KEGG:ns NR:ns ## COG: ECs0086 COG0275 # Protein_GI_number: 15829340 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Escherichia coli O157:H7 # 1 309 2 311 313 296 53.0 4e-80 MSAFVHLPVLSREAPEALVARPDGLYVDGTFGRGGHSRLILERLAQQGRLIAFDRDPEAV AAAAAIKDPRFQIVHAPFSAMKERLGDLGIRQVDGIFLDIGVSSPQIDDPSRGFSFRFEG PLDMRMDTSCGETAAEWLARASVEEIAEVLADFGEERFAHRIARAIVEARSRAPITTTGA LAKLVEAAVPKNRRDAAQHPATRTFQAVRIQVNHELDELKTTLESAGALLAPAGRLAVIS FHSLEDRIVKRFFEKRLHPDRDLDPRLPMPAGFNAQPWFCDVIRILPTKSEAESNPRARS SVLRVGTRTARLWED >gi|319804635|gb|ADMF01000024.1| GENE 100 113370 - 113786 470 138 aa, chain - ## HITS:1 COG:RSc2853 KEGG:ns NR:ns ## COG: RSc2853 COG2001 # Protein_GI_number: 17547572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 133 1 135 142 115 45.0 2e-26 MFQGTTLITLDDKGRLALPKRARDEAAADGVIVAARHPDGCLVLYPPSAWAPKRDALLKL PFSARGFVRLVLGSAEELKVDRAGRVLIPAGLRELAGLEREAALVGWGDHFELWDRARLT AAEAQAVAQTVEDLDFTF >gi|319804635|gb|ADMF01000024.1| GENE 101 113960 - 114148 113 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDRRRGPIGLRATESGLQENFRRIAATASAVPILVGQYIHPDPLMRVFSYAFPQTPKQV CG >gi|319804635|gb|ADMF01000024.1| GENE 102 114665 - 115834 1472 389 aa, chain + ## HITS:1 COG:no KEGG:plu2784 NR:ns ## KEGG: plu2784 # Name: pagP # Def: palmitoyl transferase # Organism: P.luminescens # Pathway: not_defined # 10 198 10 200 207 86 32.0 2e-15 MQHPQLFRPTFLARAVFAAAVSFACTAQADLWEAVVDTTPAGYARQSSERPGDWASFWSD TKEGTKRIFEEGNSVWIVPTYTNHPTWAWKKRHEENGYPFGMGYARQVIDNRGNERLLFA VNFVDSNYRIEPMVGYSWLARWPIGSTGLHVGAGYLAGITMRGDYMWAPLPLPLPVAKIG TDTVSFYGTYIPFTNVFFFYSTITVDDAKGRKMPLASDSPWVKSPNLLYGSYGWQYVDNG EEYSKSLMKNDTIWNVGLRRYSGRSWQTDLKYSRAQHDVAYADGSGKQSIDFRTYTLTIS YNIDVTKSLRLFAGAGVGYGKAEGPYNSDTSIFPALTLGGTWALTDHFWLTGSMDTNFPR YKGVLADRDSEYVLKSMPTAFTLGLGFAF >gi|319804635|gb|ADMF01000024.1| GENE 103 116087 - 117370 1503 427 aa, chain + ## HITS:1 COG:NMA0592 KEGG:ns NR:ns ## COG: NMA0592 COG0001 # Protein_GI_number: 15793583 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Neisseria meningitidis Z2491 # 1 426 1 426 427 563 66.0 1e-160 MDLNQALIERAQHVIPGGVNSPVRAFGSVGGAPRFIERAKGPYMWDVTDKRFTDYVCSWG PMILGHNDPEVVEAVHAAVDRGLSFGAATRAEVEIAEMITNILPAMEEVRLVSSGTEAGM SAIRLARGYTGRNRIIKFEGCYHGHSDALLVKAGSGLLTFGNPSSAGVPASVTEHTMVLE YNNPEQLEDAFAKYGDEIACVIVEAFAGNMNLVRGTQEFIDTMRRLCTKHGALLIVDEVM TGFRVALKGAQSLFNVTPDITMLGKVIGGGMPVAAFGGRREIMEKIAPCGPVYQAGTLSG NPVAVACGMATLKKIQAPGFYDRLGAQTKRLVEGLQAAAQAAGVPFTADSVGGMFGLYFL PQRPQGFADVMKADKNAFNTFFHGMLDRGHYFAPSTFEAGFVSITHTDEVIDKTIADARE VFTSMAK >gi|319804635|gb|ADMF01000024.1| GENE 104 117484 - 119736 1566 750 aa, chain + ## HITS:1 COG:CC0217_2 KEGG:ns NR:ns ## COG: CC0217_2 COG4232 # Protein_GI_number: 16124472 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Caulobacter vibrioides # 361 750 1 401 405 260 43.0 8e-69 MSLLSAFLKHAKFSVAFGRLGTAFVIAAALSAGALTSNCALAASDDGWFSAIDAGRGEKK AGPHVTVDIIAEKTSLTPQAVNRFAVRFRHQEGWHTYWKMPGDAGLPPEFTFTLSPSELK ASAPLFPLPERTVTSGLITFGYGGETLFPFNVELPRGASGRAQIALHVEYLACKDMCVPE SADVKFSIPIDIKGKDSDDAAAVAAAVRAIPERVQNDGSIKATIDGNRIRIDVAGNAIVG RSLDFLPSEKNVIDLRQAPQTAVGITQGNEPPSASLWLAATERFAKTPQPALEGVLVADG GPAKGGWAIDTSVPLQTGSVAPPPAVNPAAASSQADAVSAAADLNNSSQMTAGTGAALLF AFLGGLILNLMPCVFPVLSLKLLDLVQGAHQSQRLVGHGLAFTGGVLLSMVLLSGTLMAL RTAGHAVGWGFQLQSPWVVAALILLFGAITCNLLGLYEFTFGSRAADLKVVRSLPQSGIT SSFFSGILAVIVASPCTAPFMGAGIGYALTQPAAEAMLVFLSLGLGMATPWLLLCLFPAW AKKLPKPGPWMNTFKKVMAVPMLLALLWLAWVLTKQVDYRGLLIVLLGLAALAAFCWLLG RRQFGRSSSTIVMAALGTLTAASLALTACGIFDRHSVSTEEGWSTWSAEAVQSASSAGRP VFIDFTAAWCITCQANKLAVLDREEVVSRMSALGYVRFLADWTNKDPAITKELAKYGRTG VPLYVLIYKDGTVKVLPELLTTGTVLDALK >gi|319804635|gb|ADMF01000024.1| GENE 105 119832 - 121463 951 543 aa, chain - ## HITS:1 COG:RSc0584 KEGG:ns NR:ns ## COG: RSc0584 COG2027 # Protein_GI_number: 17545303 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Ralstonia solanacearum # 58 535 61 509 514 236 31.0 1e-61 MCAGKCLSESAKLTLNRRVQLFAAKALTAAALLSFTIALPTASAATSAAGRTASQSQLPA PLAAAAKRLRINPDDIVISVVPVESPKTAVLAWNDHRIDRPASVAKVVTTLAALETLGAN YHWYTGFYTLGEPTTKGLLKGGLFIRGGGDPSFVVEDFSMAVDKLAQTGIKRIEGNIVID RSYFNIPQVDPGAFDGRSSRPYNLQPDPALINFRNLSFEFIPDKETQTARIVTVPKLAGI SFPETIPLGRGGCGDWKTLIGFQLKDLGKGRKRVTFTGKLPAACGPKNFNVIALEPNEYL ERLFRALWERDGRTWTGHVVSGNVPKDAQRRFSRVSQPLGEVVALTNKWSNNLMARHIFL SLGADRVREAFNEAQKNEPSTGKLKSAGKAATRAELVFPRGATLEDARAALDEWLQSKGI TSQEIWIDNGSGLSRETRVTGRAMTQLLAAGWSGPYMPEYLASMPISGRDGTMAKRKVAE ERGRIKTGFLSDVRSIGGFIQAQNGQRYAVYASVRGAKNVPNGIPFLNIVIDWVYDYSEN KMR >gi|319804635|gb|ADMF01000024.1| GENE 106 121679 - 121966 579 95 aa, chain + ## HITS:1 COG:RSc0641 KEGG:ns NR:ns ## COG: RSc0641 COG0234 # Protein_GI_number: 17545360 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Ralstonia solanacearum # 1 94 1 94 96 135 75.0 2e-32 MQIRPLHDRVIIKRLEAETTTAFGIVIPDTAGEKPDQGEVIAVGPGKRDEAGHLVAMDVK VGDRVLFGKYSGQTVKVDGEELLVMREEDIMGVLE >gi|319804635|gb|ADMF01000024.1| GENE 107 122022 - 123659 2025 545 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 545 1 547 547 784 72 0.0 MAAKQVLFGDDARTKMVRGINILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI ELKDKFENMGAAMVREVASKTSDNAGDGTTTATVLAQAIVDEGMKFVAAGMNPMDLKRGI DKAVAAAITELKKLSKPTTTNKEIAQVGAISANSDEEIGQIISEAMDKVGKEGVITVEDG KSLKNELEVVEGMQFDRGYLSPYFINQPEKQAAVLENPFILLHDKKISNIRELLPVLEQV AKAARPLIIIAEDIDGEALATLVVNSIRGILKVVAVKAPGFGDRRSAMLEDIAVLTGGTV ISSNVGLSLDKATLAQLGSAKKVEVTKENTTIIDGAGDAAAIENRVKNIRTQIEGASSDY DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALI RAKLAIKDIKGDNDEQNAGIRIVLRAMEEPLRQIVANAGDEPSVVVNTVAQGEGNFGYNA QSAKYGDMVEMGVLDPTKVTRTALQNAASVASLILTTDCMVADLPADDKAVPAGMDGMGG MPGMM >gi|319804635|gb|ADMF01000024.1| GENE 108 123834 - 124466 606 210 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302860694|gb|EFL83771.1| ## NR: gi|302860694|gb|EFL83771.1| hypothetical protein HMPREF0189_00849 [Burkholderiales bacterium 1_1_47] # 1 204 1 192 196 129 37.0 2e-28 MTGLCSRRTLLTIAGAAAVSSITAAHAADGKTSKPAKRTWPDMPTVPTDFNAERCFVELQ DAGDGVVFQGPKNGPVVRLAFDTQCPWCVWQYEQLKPFLKQVTFIWHPVAVLNPWSELQG AAILSAKDRKAKFLEHEAHFHDKDFRGLDVRNVELPFDARKKVWDYSKAFRRACGISVPF GVLKTTDGRYIPVPQVTTEEFAKLSGLKPE >gi|319804635|gb|ADMF01000024.1| GENE 109 124818 - 125639 1056 273 aa, chain + ## HITS:1 COG:RSc2773 KEGG:ns NR:ns ## COG: RSc2773 COG0284 # Protein_GI_number: 17547492 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Ralstonia solanacearum # 1 271 18 287 288 335 61.0 5e-92 MKFTEMLRARWRNADTLLCVGLDPDLARLPEELAGKPDAIYSFCTGIVDATADLVCAFKP QIAYFASEGAEDALNRVVAYIHSNHPGIPVILDAKRGDIGSTAKHYAEEAFDRYGADCVT LSPYMGGDTLDPYLAYAEKGAFVLCRTSNKGGDDLQMIDLGGGERLFERVARLVSHEWNR TGELGLVVGATYPDELAAVRRIAPDIPLLVPGIGAQGGDINAAVKAGMDTEGAGMVINSG RAILYASSGADWREAARRSAIATRDAINSAREL >gi|319804635|gb|ADMF01000024.1| GENE 110 125658 - 126083 410 141 aa, chain - ## HITS:1 COG:RSc0630 KEGG:ns NR:ns ## COG: RSc0630 COG4925 # Protein_GI_number: 17545349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 31 121 8 97 118 61 39.0 5e-10 MHKPVKHLVVAAASIVVAVGSPAAQTIDMVVDSAIYTIELNASAAAENFAKRLPMKVVWE DFGKLERIARLSERLDVGRDPVVKSPVRGTFAYYVPWENLCLFRIGGNAPSRDLVELGGV DETALQAVIQSGGREVELRAR >gi|319804635|gb|ADMF01000024.1| GENE 111 126241 - 127503 1014 420 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGAKVWGTAAVVIAAAAAAGAGIITWEGRVWDEHAQDLASYKEAPVKTVIFTETARTWRT RAFTVEVELLNGLKMVWQGGAEFGLGTKTKASLDLTQGIGAQIAADKSVEGFGDELVIET SMTGTVKPVVWRLNPITYRAPENAFVCQAEAASITGEKIGQDIVARFVLGGWSCRTAEEI AANAPSTESMKDLRAEIRVGEKPIADFTFTSGPFVSGELSGDGTRAAFISARSAGPAPEG KDGKAAQCWDERVELSVTNPKAGGESASEIGLDLTITNLSEAFLTELQTATQETAVNPDA AFRVLGIWSRAFTKDGIALNLTDARYVRGKDAAHLKGAFAYKAADPNAQGQELARGASWG SFELAIPQALIAKQTAAVYTASGDLRLIDGVYQSKLEIFENACFVNGNYKGNPIALLSLF >gi|319804635|gb|ADMF01000024.1| GENE 112 127618 - 129045 1313 475 aa, chain - ## HITS:1 COG:alr5216 KEGG:ns NR:ns ## COG: alr5216 COG1253 # Protein_GI_number: 17232708 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Nostoc sp. PCC 7120 # 5 425 6 427 442 340 44.0 3e-93 MSSWLDVALLAVLIVLNGVFAMSEISLVTSRRARLQRLIDDKVAGAERARELNADPNRAL STIQVGITSIGILSGIVGESALARPMEAFLVMVGLSPETAKAIGLFVVVVLITYFSIVMG ELVPKRIGQISPERIACRLAPPIHCLSIIAAPFVKLLSASTHLLLKRLGISETQGSSVTE EEIHAMIEEGQESGVIETAERNMVRNVFRLDDRQVASLMTPRANISWIDLEAPDEENIEL IRTSKRSRLPVCVGSLDNVKGVCSTKMLLQQILDSGKPDFANNLMPVSYVPESLTGMELL EHFRKTDVPLALVVDEYGEVLGLVTPRDVLEAIAGEFKPEQPDDSWATRREDGSWLLDGI IPIPEMKDVLSLKHVPEEEAGRYSTLAGMVMLLLGRLPKEGDAVEWLGWRFEIVDMDGRR VDKVLASRLRAAHGMAEVVPKGEELNPQIKMGVVDNPHDGADSKTIKSVDKSVGN >gi|319804635|gb|ADMF01000024.1| GENE 113 129212 - 129754 497 180 aa, chain - ## HITS:1 COG:RSc2770 KEGG:ns NR:ns ## COG: RSc2770 COG1546 # Protein_GI_number: 17547489 # Func_class: R General function prediction only # Function: Uncharacterized protein (competence- and mitomycin-induced) # Organism: Ralstonia solanacearum # 12 171 11 165 166 135 48.0 5e-32 MSTLLEQAELAADLLGAAAHENGRIVCTAESLTGGMVSELITSVAGSSAWFDRGYVTYQI SGKEEMIDVPAEVIAEFGVVSEPVAEAMARGALACSHADLSVALTGVAGPSGGTAQTPVG TVCIGWAERDPSGAIATSVRTIHATGDRRTVRLAASLTALQGLIALIRGGDPMRMPSPFD >gi|319804635|gb|ADMF01000024.1| GENE 114 129784 - 130311 325 175 aa, chain - ## HITS:1 COG:PM0728 KEGG:ns NR:ns ## COG: PM0728 COG1267 # Protein_GI_number: 15602593 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Pasteurella multocida # 22 167 11 157 161 119 43.0 2e-27 MFEKYAPDAPANRVRITRNFVLSHPAHWIATFFGVGALRPAPGTWGTLAGVLVYGLLDPF MTRECWVALTAGLFMLGAWACERSGRDIGVVDHGGFVIDEVVAVWAVCIMLPAGWGWWLA AFLAFRLFDIVKIWPGSWFDRRMKSGLGVMLDDIAAAVYAWALIVLLSAAWQRWA >gi|319804635|gb|ADMF01000024.1| GENE 115 130371 - 131378 732 335 aa, chain - ## HITS:1 COG:RSc2768 KEGG:ns NR:ns ## COG: RSc2768 COG0611 # Protein_GI_number: 17547487 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Ralstonia solanacearum # 6 331 16 330 332 269 50.0 5e-72 MSEAGEFQIIEQFFTYPSFGAWKSQGVGDDCAIIDTGAGRLAVTCDMTALGTHFFPDADP EDVGYKALAVNLSDLAAAGAVPRAFFLSIGLPRRDDGWLADFSRGLMALAHESGCALLGG DTTRTPEIDGRHAPATISITAMGDLPAGMGLTRSGAQPGDDIWVSGTVGDAYAALMCRWG RWQVMPDAEPRLFARMDRPTPRIALGQALLGAATACADISDGLLADLDHILTRSGVSAEI EWERIPLSPVLSTLTVARQHEAALAGGDDYELIFTAPPAAAERIFEAGLLSNTPVSRIGR ILEREETAVVVRTADGLPVAVPSTGYDHFNAEDPE >gi|319804635|gb|ADMF01000024.1| GENE 116 131633 - 132154 603 173 aa, chain - ## HITS:1 COG:RSc0711 KEGG:ns NR:ns ## COG: RSc0711 COG0781 # Protein_GI_number: 17545430 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Ralstonia solanacearum # 1 166 7 159 161 102 38.0 3e-22 MTEAHKPGRQAHAPRHLARVFALLGFYQWIADPTLKAQKIEENLPALLADDEEGTPVEDL GLTSEDWARCDRELLTTLLSGAIGEHAALEAEFSSFVDRDLKRVSLVERAILFIGTYELL RCPQTPYRVVLNETIELAKHFGSGYRFTNAVLERVAAKVRAAEFEADHAQKKA >gi|319804635|gb|ADMF01000024.1| GENE 117 132303 - 132794 651 163 aa, chain - ## HITS:1 COG:RSc0712 KEGG:ns NR:ns ## COG: RSc0712 COG0054 # Protein_GI_number: 17545431 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Ralstonia solanacearum # 7 163 7 163 164 174 59.0 9e-44 MAVDIIPTSTDGTDLRIGIVVSRFNEYAGRGEFEACMDELRKLGVMDEDVTKVSVPGALE IPFALMKLAQTEEYDALIALGAVIRGETYHFELVSNESGAGITRIGLDYEIPIANGVLTT ENDEQCQERIEMKARDCARCAVEMANLAKEFVSADDFEENPED >gi|319804635|gb|ADMF01000024.1| GENE 118 133244 - 135007 2259 587 aa, chain + ## HITS:1 COG:DRB0046 KEGG:ns NR:ns ## COG: DRB0046 COG1785 # Protein_GI_number: 15795180 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Deinococcus radiodurans # 31 585 21 582 588 360 40.0 5e-99 MQKFILSTASAALAAVGVLSALAAAPVSAAQIYPVDQARFMTNAKFDFKIELDKKADRKN VVVEINGADYKKVLKGSEIWVPEEIDSEGSALIMRDVEIKKPGKYTVVVKSPEGEMRADW DLYSTPKKAAAKNVIILLADGLSVGHRTAARILSKGVKNGMYQAPLAMDNMPHMALLGTS SVDTIAADSANTASAYMTGHKSSVNALGVYADRTKASQDDPRQETIAELLRRKTGKAIGV VSDAEIEDATPASVVAHTRRRSDKADIVGMFYEVRPEVILGGGSAYFLPQGTPGSKRKDS TNYLELFQKDGYKFVSDRTELLAAVDGKAPQKLLGLFHTGNMDGWIDRHQWKGNTVKKFP NQPDLTDAFDAAVKVLGQNKEGFFLMLEAGLVDKFSHPLDWTRSVGDTIAFDKVVERAQK YVDEHPDTLLIVTGDHTHSISVAGTVDDNKPGKDMREKVGVYADAGYPNYVDADKDGFPD DFAPSKRLAVFFGAHPDYYETYRAYPDKTFNPAVKNEKGEYVADETYKSVEGGHFVEGNL PRNESQGVHTVDDLVVTARGPKSEEIKGFMNSTEIFRVMAEALALGH >gi|319804635|gb|ADMF01000024.1| GENE 119 135126 - 135578 381 150 aa, chain + ## HITS:1 COG:no KEGG:RHECIAT_CH0004388 NR:ns ## KEGG: RHECIAT_CH0004388 # Name: not_defined # Def: hypothetical protein # Organism: R.etli_CIAT652 # Pathway: not_defined # 1 150 9 153 153 167 58.0 1e-40 MHRRTVLTAGILFPTLYSLASSAALAADLPQLAFPEMYSGVSVLGLTFSDKLKSLAGKRV RMQGFMAPPLKADAHFFVLTESPVSLCPFCSTDADWPDNIVVVFLSDKQEFVQANRLIEV VGTLEVGSRMDEETGFVSLVRIVNARFEVV >gi|319804635|gb|ADMF01000024.1| GENE 120 135660 - 136433 214 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 63 234 36 208 223 87 31 5e-16 MNSASPTADVGRKCSSDTGCCADPQPFDLSLETVRLDVPDGTGVRTIFSCFDFKLPQGAM LGIRGPSGAGKTSFLKCLSGIITPTEGVVRWGTLALSQCTESVRDRWRGQHCGFLFQDFR LFEDLTALDNVLLPLTFRGTIAAHDRETAREMLAARGIRTNTRAGDLSRGEMQRTALVRV LMGRPAVILADEPTANLDEARGDIVVDDLMSAAQSLSASLILVSHSDRVLKRLPLTAEIR AGRFITPDELTPSRSIP >gi|319804635|gb|ADMF01000024.1| GENE 121 136447 - 137736 816 429 aa, chain + ## HITS:1 COG:VC2554 KEGG:ns NR:ns ## COG: VC2554 COG0577 # Protein_GI_number: 15642549 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Vibrio cholerae # 5 429 9 414 421 88 25.0 3e-17 MNIALLLKSELRRSAGILAGMALIIALALSIAVAAGICERMVKASAAQSADDFDLLIGAR GSSSALLLGTVFLRDEMLPIVPASAWANIREAQTAKSSIRWAAPVAFGDRTPSGRTIVGT TRSFLDRGKSREPAAGRFFTKPTEAVAGASSGYVIGDKFSPMHGRVHGAGHAHEGIAYEV VGILPPTGTPWDRAVMVPIESVWAAHADAHDDHDHDHEAEEAHDREQPSAHLFESWMLSN KTHLEELPGFSAVIVKPASVSSAYRLRQRFNEIDAAGHDGKIVPLMGVFSAEVLVNLYAA FGGASQALAFVCLLTSIVALAAVLLASVLLGRLRLPTILLLRTLGAPRRYAAALTWSIVM TAATAGILGSLILGWGAAELCAGALELETGARITPSFSMREIWLALTALAAGAVCALLPA WLAGRMKLS >gi|319804635|gb|ADMF01000024.1| GENE 122 137832 - 138923 1008 363 aa, chain - ## HITS:1 COG:PA3723 KEGG:ns NR:ns ## COG: PA3723 COG1902 # Protein_GI_number: 15598918 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Pseudomonas aeruginosa # 3 360 2 354 368 313 47.0 4e-85 MNTMLFTPISIGPVELPNRIAVPPMAMYSARSGVVQLFHKMHYGHLAASGAGLVCIESTA VSPDGRITNYDLGLWSDECEQGLKELVDLMHEIEPECRVMVQLNHAGRKASSVRPWRGPA RTLPPMEGGWRVRAPSPIPFSDTYTTPREIEFGDCRQIAEDFGAAAARAARAGVDAVEIH MAHGYLIHQFLSPLSNHRIDEYGGALDNRCRFAKEVMNAVKAAVPANVAVGLRVSATDWV PEGWSIEDTIHLVNLAKKEGCTFVDVSTGGNTPDAPIPVGPGYQVPFASRVKAETGMTTF AVGLIRDAWQAETLLREGAADVIDIGRAMIDDPHWGWHAANRLHVEKVPKLVVPPQYLRG LSY >gi|319804635|gb|ADMF01000024.1| GENE 123 139049 - 139666 850 205 aa, chain - ## HITS:1 COG:RSc0714 KEGG:ns NR:ns ## COG: RSc0714 COG0307 # Protein_GI_number: 17545433 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Ralstonia solanacearum # 1 197 1 201 217 210 58.0 2e-54 MFTGIVQAVGKVREPEKLGNGVRLTILAPDLGLNEVKVGDSIAVNGACMTVIEVGEREFK IDVSAESLSKTTGLDTFGEVNLEKAMRLSDRIDGHIVSGHVDGVGQVESMEPVAESWRLV VRVPRVLSPYVAYKGSITINGVSLTINKVEDTALDTLVTINLIPHTLEVTTLKHLKAQSY VNVEIDTIARYVERIMSLKNEDSLF >gi|319804635|gb|ADMF01000024.1| GENE 124 139670 - 140917 744 415 aa, chain - ## HITS:1 COG:RSc0715_2 KEGG:ns NR:ns ## COG: RSc0715_2 COG1985 # Protein_GI_number: 17545434 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Ralstonia solanacearum # 199 415 1 217 221 176 48.0 9e-44 MTTSASSLSEDNAQNTSSVLPAIETLVDPERLACAQKLEAHAAVSNSEAARSAADDAWMD LALAQARKAWRISPPNPSVGAVIVRNGRLVGAGHTQRTGGPHAEVMALRSAFERGLSVEG ATVYVTLEPCSHYGRTPPCALALIQSKVGRVVAAVGDPNPKVHGRGIRMLLEAGIPAELG VREAEAREVNIAFLTRMTRGTPWVRMKTAVTLDGRTAFPDGRSQWITGEAARADVQFWRG RAGAVLTGIGTVLADDPQMNVRLPDQERQPLRIVIDPRMETPPAGKLLTSKGGKVFIAAA AEYPTRRAALEAAGAEVWVLPDAAVPGRVDLRELMRELAKREVNEVHVEAGPRLSGALFA AGLIDEMLFYYAPCLFGAGMGPAAVPLPAEPGAAYRWRLQSLDQIGGDFRVLLRR >gi|319804635|gb|ADMF01000024.1| GENE 125 140917 - 141546 548 209 aa, chain - ## HITS:1 COG:RSc0728 KEGG:ns NR:ns ## COG: RSc0728 COG1327 # Protein_GI_number: 17545447 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Ralstonia solanacearum # 1 146 1 146 149 151 48.0 1e-36 MRCPFCRHPSTSVVDSRAPKPGFVIRRRRQCPACGKRFTTFERVAIAMPWIIKRGGGRVE YNRAKLRGSMQLALRKRPVSSERIDAAVGAIEHKLSAMGEREVRSSKLGELVLEALRGMD TIAWIRFASVYLNINDPKAFAEMIEQALREAPAAADEDAAGLETGEFYGVPETDESVEVA DSPIELSDDSDPKGQLASSDPDGYIRKYR >gi|319804635|gb|ADMF01000024.1| GENE 126 141581 - 141739 72 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILADLWYAPRSDELCTPNEKNDQQPNNKKQKGLHLWLQTLLLYVDGTRGID >gi|319804635|gb|ADMF01000024.1| GENE 127 141764 - 143029 1466 421 aa, chain - ## HITS:1 COG:RSc0729 KEGG:ns NR:ns ## COG: RSc0729 COG0112 # Protein_GI_number: 17545448 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Ralstonia solanacearum # 12 418 13 414 415 572 71.0 1e-163 MFNLSECPAKRDPELWQWIDAEAKRQEQNIELIASENYASPAVMAAQGSCLTNKYAEGYP GKRYYGGCEFVDEVERLAIERAKKLFCEPAGVEMAVNVQPHSGAQANSAVFFAVLKPGDT FMGLSLADGGHLTHGMHLNFSGKYFHCVPYGLNDKEEIDYDEVERLAKENKPKLIVTGAS AYSLKIDFKRFAEIAHSVGALLMVDMAHYAGLIAAGVYPSPFGHADIVTTTTHKTLRGPR GGMIFVRPDLEKAINSAVFPGMQGGPLMHVIAAKAVALGEALQPEYKTYQEQVMKNAHVM AEQLMARGLRIVSGRTESHVMLVDLRPLKITGKTAETVLHSVGITVNKNAIPHDPEKPFV TSGIRLGSPAMTTRGFKEDEARLTANLIVDVLEAPEDQAVLDRVRGEVAKLTAKFPVYVH D >gi|319804635|gb|ADMF01000024.1| GENE 128 143211 - 143813 551 200 aa, chain - ## HITS:1 COG:XF2170 KEGG:ns NR:ns ## COG: XF2170 COG1881 # Protein_GI_number: 15838761 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Xylella fastidiosa 9a5c # 1 196 1 201 204 132 41.0 5e-31 MDISSRTFSEGEMIPERCAYGRMGEGGQTVRSANLSPELSWSGAPAGTKSFAVLCIDDDV PTDLKARDASGELPVDQPRRRFVHWVQIEVAADVSNFPEGVFAQKNVPAAYGRPGLNDYC RGEGKPEADGTGLGYDGPCPPFFDARRHYYRYQVLALDLETLDLDKHFTLEDFEKTAKGH VLATAEVVGRYTLNPRLRSA >gi|319804635|gb|ADMF01000024.1| GENE 129 143888 - 144343 323 151 aa, chain - ## HITS:1 COG:TM0730 KEGG:ns NR:ns ## COG: TM0730 COG1490 # Protein_GI_number: 15643493 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Thermotoga maritima # 1 149 1 143 149 141 51.0 4e-34 MIVLLQRVLEAQVVRRAEGGQAEEPLGAVGRGLLAFVCAEPGDSAAVIAKAARKTARLRI FEDENGRMNLSAADIGGGVLAVSQFTLAADCTSGSRPSFSNGASPAEAQKAYLAYVEALR AEGLKVETGSFGAHMHVRLTNDGPATFWLKF >gi|319804635|gb|ADMF01000024.1| GENE 130 144343 - 145608 354 421 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 59 419 41 416 418 140 30 3e-32 MTQNNSQAAEAQKQFPVTDDIREAMALIARGTDTFLIQSEFEQKLARSKATGEPLRCKLG LDPTAPDIHIGHTVVLNKLRQLQDLGHTVIFLVGDFTAAIGDPSGRNTTRPPLTREQIEA NAQTYLNQAGMVLDLDKTEVRYNSEWSNALGATGLIQLASRYTLARLLERDDFAKRFKEE LPIAMHELLYPLMQGYDSVALKADLELGGSDQRFNLLVGRELQRQYGQEPQCILTMPLLV GLDGVQKMSKSKKNYIGITDPANDMFGKVMSITDDLMWNWYDLLSLRSNAEIAQLKKECA EGRNPRDAKVLLAREIIERFHDKAAADAAEAEFNARFQKGAVPNDIKDVTVAAPTGEIGI MQLIKVAGLAPSNAEAGRNIDQGGVRIDGESVRDRTLKIQAGAEFVLQVGKRRWARVKVT A >gi|319804635|gb|ADMF01000024.1| GENE 131 145903 - 147483 1114 526 aa, chain + ## HITS:1 COG:PA0667 KEGG:ns NR:ns ## COG: PA0667 COG0739 # Protein_GI_number: 15595864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Pseudomonas aeruginosa # 99 457 83 435 447 196 32.0 1e-49 MPAQTLVAGALARLGRAALTFARSIAVRLGLKPEAVRSRALAAGLLTVGTALSVSLLAAL GPALAPHTVEAHPMEIAVAAPDLSGEIGAVSRLGTYTPKHYEISSSDTIFSLFAKLGIHD NQARDYIFTQQRLTPFLAPQPGQHVTAGVSNAGQLEYMRLYLDGAREDNSRTIEVSRIGR ELISNVLPFTFSTMETLVSGDAVGNLDTTARELHIPESVTDQLRAVWVGADDPVEHLTAG SSLRLVYEKKYADGRFVRNGQLLAAQIVDASGVHEAFWFSDGRGAGSFYTLDGRSASQTF LRVPLDFKDVSSEFAPLRRHPVTGVLRPHNGTDFRAPSGSRILAAADGRVTRVAYEARGY GHYVQIDHGLNRTTLYAHMRRVAKGIRPGVIVKKGDEIGYVGMTGLATGPHLHYELQIDG VQINPATADLPDTENLSAYQLAQLRASAQPLIERFERAALDEGRPSPQALMAKQAQKSAA ERDEEADQAANAAGRVRLRPVKIDDLTDSSHQEVGRASIVRTGGHS >gi|319804635|gb|ADMF01000024.1| GENE 132 147480 - 148616 520 378 aa, chain + ## HITS:1 COG:PA0666 KEGG:ns NR:ns ## COG: PA0666 COG2377 # Protein_GI_number: 15595863 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Pseudomonas aeruginosa # 5 377 6 363 363 291 46.0 2e-78 MIVAGVMSGTSLDGIDAVAVNFSDDGSMRVVGQTSLPMPSALRSELLALALGTDHEIERM GDASVALAHLYAWTLQDLQQRLGQPIAAAGVHGQTIRHRPERGFTLQLNHPALVAELSGI DIIADFRSRDVAAGGEGAPLVPAFHAACFRSAKCSTAVLNIGGIANFTLIPQDFAADVLG FDCGPGNMLLDHWMQTAQGLPYDSDGSYARSGSIDQALLALMLTDPYFDRPIPKSTGREY FPPSWLDEKLHASGEFRRAADMPDERRRSIAATLTELTARSAVDALIRWLPDVQRLYLCG GGALNSFLCERIRIALDAAGSHCVALCSTAACGIDPMAVEGAAFAWLAHQWFLKQPGNLP AATHAAGPRRLGCLYPAS >gi|319804635|gb|ADMF01000024.1| GENE 133 148718 - 149110 592 130 aa, chain - ## HITS:1 COG:RSc0494 KEGG:ns NR:ns ## COG: RSc0494 COG0316 # Protein_GI_number: 17545213 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 16 130 8 124 124 168 73.0 2e-42 MTEATTTAPVETKNEAVPELMPDPITFTDAAVAKVKSLMDEEGNPDLKLRVFVQGGGCAG FQYGFTFDETQNDDDAVMQKGGVTLLIDSMSYQYLVGAKIDYKEGLSGEQFVIDNPNAVT TCGCGSSFSV >gi|319804635|gb|ADMF01000024.1| GENE 134 149403 - 149795 554 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|152980472|ref|YP_001351985.1| small subunit ribosomal protein S9 [Janthinobacterium sp. Marseille] # 1 130 1 130 130 218 83 2e-55 MIGNYNYGTGRRKSSVARVFIKRGTGKIVINGRPLDQYFQRETGRMIVMQPLQLTENVET FDIMVNVVGGGESGQAGAVRHGITRALIDYDEGLKSVLSNAGLVTRDAREVERKKVGLRK ARRAKQFSKR >gi|319804635|gb|ADMF01000024.1| GENE 135 149811 - 150239 599 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|94309355|ref|YP_582565.1| 50S ribosomal protein L13 [Ralstonia metallidurans CH34] # 1 142 1 142 142 235 76 1e-60 MKTFSAKPLEVKRDWFVVDASDKVLGRLASEIALRLRGKHKPEFTPHVDTGDFIVVINAD KLVLSAEKAGKKTYYRHTGYPGGIIETTFAQMQEKHPGRALEIAVKGMLPKGPLGYAMIK KLKIYAGAEHPHTAQQPKVLDL >gi|319804635|gb|ADMF01000024.1| GENE 136 150559 - 151161 492 200 aa, chain - ## HITS:1 COG:RSc2813 KEGG:ns NR:ns ## COG: RSc2813 COG2095 # Protein_GI_number: 17547532 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Ralstonia solanacearum # 1 198 1 197 197 153 45.0 3e-37 MEYSFWGGLMLMVLMADPLGNIPITISCMKNVPNKRRTFVLFRECMIAMGMLLLAMFFGR PFLAAIGLSDAALSIGGSVIVMLMAIRMVFPTQEGVFGQTPGGEPYIVPIAIPAIAGPST LATIMMLAASEPNRLFEWGAVVVITCVVSFFVLASADWLERHMGEKLTLAFERLTGLLLA MMATQMFLGGVEAFLAKLPH >gi|319804635|gb|ADMF01000024.1| GENE 137 151286 - 153238 1564 650 aa, chain - ## HITS:1 COG:DR1019 KEGG:ns NR:ns ## COG: DR1019 COG0578 # Protein_GI_number: 15806042 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Deinococcus radiodurans # 28 509 23 518 522 333 43.0 9e-91 MAAAEVKPTVKGLNRTEALASIMQDPVWDVVVVGGGATGAGVALDAASRGLKTLLLEAQD FSAGTSSRSTKLIHGGVRYLKNPRDWGLVHDALVERKRLIDNCPQLVHAEPFVLPCFKKW EREIYMAGLGFYGAMAGKDQIGRTRMLKPEEAEKVLPGVKTEGLLGGVEFFDAQFDDARL NIALIRTAATHGAVCLNYMPVVGLERIGGLIQSVTVEDKHTGESHRIRTKMVFNCAGVWA DQIRRLADPQAAQLLRFSRGTHVVVDRSFLPGDAGMLIPKTRDGRVLFAIPWHNAVLLGT TDVEVREAEFDPQPSEDEIAFILETASGYLAKPLYRSDVLAAFAGLRPLLRVPAGQSSTA QASRSHSVISEFGNMITIAGGKWTSYRRMAEDAMLEATLRHLIEPRLCITKDLPILVDET FNPEVIEEAACQGPENDAKVIEYALYARDFEGACTAEDILWRRLRVGVLNAARAQELLPK VAAALEGREYAAPAASVANEAETHAEEAAVQCSGKAADEVAEVSTEPSSKSVKPEVSAEA LETPTAAEEVVKSAEADAEVLAGPSSKSETPEVSVKALETPTAAEEVVKSAEADAEVLAE PSSKTETPEISVKALETPTAAEEVVKSADADAEVLAEPSSNRKSKRFWHR >gi|319804635|gb|ADMF01000024.1| GENE 138 153240 - 154733 997 497 aa, chain - ## HITS:1 COG:DR1928 KEGG:ns NR:ns ## COG: DR1928 COG0554 # Protein_GI_number: 15806927 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Deinococcus radiodurans # 3 495 5 495 501 618 63.0 1e-176 MPQYILALDQGTTSSRALLFDAAGEVAALAQQEFRQSYPRPGWVEHDAREIWSAQYAVAR RALEHAGVDVKSVAAIAITNQRETTVLWDRFTGEPIAPAIVWQDRRTADRVEALEAQGLG PLVSGKTGLRLDAYFSATKIEWLLDHVPCARQRAEKGEILFGTMDSWLIWNLTRGAEHVT DTTNASRTLLCDLRSGQWDDELLDIFRIPRAMLPRIEPSSGVVGCTHPSLFGAAVPIAGV AGDQQAAAFGEACFAPGSVKNTYGTGGFLLMNVGGEPRPSENRLITTAAWKLGCAPTQYA LEGSVFIAGAVVQWLRDQMGFIKSASEIEALAREVPDSGGVWFVPAFVGLGAPYWDPDAR GMLIGLTRGTNRAHIARAALEAIAFQSAEVLTAMAKDATRPVRELRVDGGAARNDLLMQM QADIAGVPVIRPAQTETTALGAAFLAGLASGFWQSTDEIASLWRAERVFEPVMNEDQRGF LMNQWARAVGRARKWNQ >gi|319804635|gb|ADMF01000024.1| GENE 139 154915 - 155631 787 238 aa, chain - ## HITS:1 COG:no KEGG:BB0209 NR:ns ## KEGG: BB0209 # Name: not_defined # Def: putative ATP-dependent RNA helicase # Organism: B.bronchiseptica # Pathway: not_defined # 23 140 435 569 574 67 42.0 6e-10 MDRKPWQDKGLRRSFDGDEGGERRRFGRFDRFDREERSDRREFGDRPRRDFGDRKPFGDR PRFDRFDRSDRSDRFDRSERRDFGDRPRRDFGDRPRFDNKKPFRNRFDGPRQDFGTRSGP RARAYDTRRFAERSEFARNAMVKIDSDIADFFGSPEAVNQALRLLIDAARTVKFPQAAAE TPNAELEPATAAQIFGETDIDDDDVEDSEYGDGAADSADDADTEDSGEVSVEEDKADK >gi|319804635|gb|ADMF01000024.1| GENE 140 156307 - 156606 375 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302859045|gb|EFL82129.1| ## NR: gi|302859045|gb|EFL82129.1| ribosomal subunit interface protein domain/'Cold-shock' DNA-binding domain protein [Burkholderiales bacterium 1_1_47] # 4 97 6 101 103 70 42.0 2e-11 MTAQIVFHGINRSAAVEAAVNEKLEGLAKFDNQIGPCKVTVTQEGHQTMGPFTIRVDLVA SGRNLIVTRTNQDVMAALTESFDTIRRSVVEEADKRRQH >gi|319804635|gb|ADMF01000024.1| GENE 141 157551 - 163280 3041 1909 aa, chain + ## HITS:1 COG:RSp0994 KEGG:ns NR:ns ## COG: RSp0994 COG0178 # Protein_GI_number: 17549215 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Ralstonia solanacearum # 24 1887 6 1919 1945 1771 50.0 0 MPQQTSKPAVPPTTAAAADAAPAIRIRGAAQNNLKHLNLDIPIGSFTVVTGLSGSGKSSL VFDTLYAEGQRRYVETFSPYARQFLDRMDRPKVDAIDGVPPAIAIDQNAVIRTSRSTVGT MTEINDRLKLLFAQKAEVYCPHDGAHVANFTPAKIWEDFRNRINAEGLLEAKAAVAFERR VPHSMPLEEALAALSAQGFTRILAQKETPDAVTLTVAADRFRPSTVERARAMEALETALE KGAGEVIFWVEKEGIWTPVGRWRRGRICPECGEKFHAPRPSDFSFNSPVGACPVCRGFGR VITTDLNLVIPDRTKSLLEDAVKPFSTPTFRECKEEMLNACRLNNIPLTQAYEDLSEDAR RFIEEGDPHWSGDWQHQWYGIRRFFEWLETKNYKMHVRVLLARYRSYHTCEACGGARLLP EALVWRLGTIDDRQNAAAALGSDMPSVEPIVTGQQLSPAAYNRLPGFNFHELMLLPVSEL RHFLERLAGRPHDEAEDLVLREALSRTQFLCDVGLGYLTLNRQGRTLSGGEVQRVNLTTA LGTNLVNTLFILDEPSIGLHPRDMDRVNAILRRLTSAGNTLVVVEHDPQVMLAGERLIDL GPGAGANGGQIIYEGSTRGVLCAATETGAYLSGKKRISRKALPIDDQTPFFCIAHAKLNN LKDISVRFPVGRLIAVAGVSGSGKSSLIAETLVPLMARTLGTANSAASSAGEDAGDISSA VLSGDLPSSVEFVDQSSLGRTARGNPASYTGVFTSIREFFGTSSEAAEAGASPADFSFNS GKGRCPHCAGTGWEHVEMQFLSDIYLPCPVCRGRRWQDWILAVRPELDDGVRRSIDEVLD LTVEEAAAAFANHPAIIKSLSLLSLTGLGYLKLGQPLSTLSGGERQRLKLAARIAEGIPQ KHRRSDAAWNGQLFVFDEPTTGLHFADTAKLVDIFDRLTHLGATVIVIEHNLDVIGAADW VIELGPDGGAAGGSLIFAGTPADMTAQGTLTGKALSAWRRAQNGDQSREDFFNLPPLNPT RNADTLAREASAIVIEGAKEHNLKNLSVDIPRDVFTVITGPSGSGKSTLAFDIVFAEGQR RYLESLNAYARSMVQPPPEPDVSSIRGIPPTVAIEQRTTRGGLRSTVATMTEIYHFLRLL YVKLGTEYCPNCGIPVETQTPGLIASRLKTQFREGRVALLTPIVESRKGIFQKELLTLRQ KGVTTVRADGRFLTLDPELPKLARNSLHTIEALAGFVDAAAPAADIEETLQAALNLVGAT HLCVVRAELVAPTPAGAPALTIPAADTAFYSLDRACPKCGLSLPELDPRLFSYNSEMGAC PKCSGYGIITDAIRKAIRKGEAMGSEMHAADETEIICRACGGTRLNPIARNVRWAGKTIP EVCAMTAQEASSWFKNLELDDRSRTIANDALLEIRSRLNFLTEVGLEYLTLDRSAPTLSG GETQRIHLASQLGTNLRGVCYVLDEPTIGLHPRDNAMLLSAIERLTHKGNTLLVVEHDEE TIRRADHIIDIGPGAGIRGGRLMGQGTVEDLEANPDSPTGRMLAHPLPHTGTPQRRVKLN DPELKTLVFRGVHARNLQIDEITVPLQRFTVVTGVSGSGKSTFCREVLFANLSRRLKDAQ APLVGTDQLTGFDNVGRVLEVDQTPIGKNSRSCPATYVGIMTAIRDLYAATNEAQARGYD ASRFSFNKAVGACPVCAGQGLRTVEMNFLPDVKVLCEACAGKRFNPETLEVLWRGKSIGD VLEMEIDEAVDFFASMPSIAYPLKLMQDVGLGYLTLGQPSPTLSGGEAQRLKLVTELAKV RTDGSFAARAPHTLYVLDEPTVGLHMTDVNRLSKVLSRLVDAGSTVVVIEHNLDIAADAD WIIDLGPEGGAKGGKVIAQGSPKMVARKNTATGIVLKAFLAEHKPVKSA >gi|319804635|gb|ADMF01000024.1| GENE 142 163345 - 164478 961 377 aa, chain - ## HITS:1 COG:RSc2417 KEGG:ns NR:ns ## COG: RSc2417 COG0795 # Protein_GI_number: 17547136 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 1 376 7 400 401 226 34.0 5e-59 MSVISRQFAKDILLSTIFVLIVLIALFAFFDLIGQLDDLGADYTIGRAFLTTSLTLPSRA YEVMPLAVLLASVYTMSKWASTSEFTVLRASGCSPWRLARSLLIPGVICVLATYGLGEIV APAAQRFAQEVRSGTNASLSIRGFASGAWVRDVINSPEDGRVERYINVRNLSASDRQLTG AWRMFEFNRDDGRLLRLVRAESGRWTGTGWELTNAVIIHYPAVTATKDAPQQGSVTTEHV DALKLTSTVNPDILSVMTTKPDRMSMDELNRFIEHLDQVHQDTEHYVSVFWSKAFYPFIC LVMLAVAMPFAYMNARSGGMAVKIFCGVLVGIAFYALNNIFLYLSVLSSMPPALMAALPS ILMCFAAALSLWWLERR >gi|319804635|gb|ADMF01000024.1| GENE 143 164475 - 165614 787 379 aa, chain - ## HITS:1 COG:RSc2416 KEGG:ns NR:ns ## COG: RSc2416 COG0795 # Protein_GI_number: 17547135 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 1 327 1 326 372 222 39.0 8e-58 MIFKRSLIAELANLAGAVFTVLFTIVLAVAMVRFLNMAAGGSIEHGTVVQLVLYNALVNL PPLLAASLFIATLMTLMRSWQDNEMVVWFSSGGRSILSWIEPTVKFALPIVVVIALLSIV ISPWARAETDRLRNSVSAREDVNAIAPGRFIEAMGGKRVFFVESAEEGGNQVRNVFMAEG DWGKESVVTAEKGTIEVNAEGDRYVVLGNGRRYEAQTDSGKTRIVEFGSYGVRLDIRIDR AFASTKTSSMPIALLIASPTPDHQAELLWRFSWPAAALLLALLAIPLSCTSPRAGRSLNL LMAALVFILYLNALSIVETKIEQQALTFWSGYTVLNGSLLILTVVLFIRRTWMTRWLPSW CSAWRLREMLAHRSKGGEA Prediction of potential genes in microbial genomes Time: Sun May 29 19:54:30 2011 Seq name: gi|319804496|gb|ADMF01000025.1| Sutterella wadsworthensis 3_1_45B cont1.25, whole genome shotgun sequence Length of sequence - 163060 bp Number of predicted genes - 142, with homology - 116 Number of transcription units - 74, operones - 34 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 425 347 ## Ppha_1041 transposase IS4 family protein - Term 486 - 516 -0.7 2 2 Op 1 33/0.000 - CDS 556 - 951 521 ## PROTEIN SUPPORTED gi|194288942|ref|YP_002004849.1| 50S ribosomal protein L19 3 2 Op 2 30/0.000 - CDS 1022 - 1786 559 ## COG0336 tRNA-(guanine-N1)-methyltransferase 4 2 Op 3 12/0.000 - CDS 1797 - 2375 650 ## COG0806 RimM protein, required for 16S rRNA processing - Term 2392 - 2420 -0.9 5 2 Op 4 . - CDS 2601 - 2873 312 ## PROTEIN SUPPORTED gi|71908679|ref|YP_286266.1| SSU ribosomal protein S16P - Prom 2986 - 3045 4.4 - Term 2937 - 2989 2.8 6 3 Op 1 29/0.000 - CDS 3097 - 4035 1045 ## COG2025 Electron transfer flavoprotein, alpha subunit 7 3 Op 2 . - CDS 4050 - 4799 872 ## COG2086 Electron transfer flavoprotein, beta subunit - Prom 4968 - 5027 6.9 - Term 4990 - 5034 1.1 8 4 Op 1 . - CDS 5077 - 5520 566 ## COG1238 Predicted membrane protein 9 4 Op 2 . - CDS 5546 - 6355 867 ## COG0345 Pyrroline-5-carboxylate reductase 10 4 Op 3 . - CDS 6389 - 6544 100 ## - Prom 6606 - 6665 2.8 + Prom 6661 - 6720 2.1 11 5 Tu 1 . + CDS 6769 - 7599 853 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 7610 - 7654 12.4 - Term 7507 - 7545 1.5 12 6 Tu 1 . - CDS 7661 - 8377 460 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 8544 - 8603 4.1 13 7 Op 1 . + CDS 8958 - 9671 357 ## XCV1224 hypothetical protein 14 7 Op 2 . + CDS 9728 - 11005 653 ## 15 8 Tu 1 . + CDS 11269 - 11934 398 ## COG1636 Uncharacterized protein conserved in bacteria - Term 11878 - 11924 2.2 16 9 Tu 1 . - CDS 12091 - 13923 2470 ## EFER_3637 putative arylsulfatase; possibly exported - Prom 14017 - 14076 5.0 + Prom 13925 - 13984 2.3 17 10 Tu 1 . + CDS 14106 - 15029 655 ## COG0583 Transcriptional regulator 18 11 Tu 1 . - CDS 15058 - 15252 57 ## - Prom 15329 - 15388 2.2 + Prom 15053 - 15112 3.5 19 12 Tu 1 . + CDS 15209 - 16603 1745 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 16751 - 16787 6.1 + TRNA 16666 - 16740 62.1 # Glu CTC 0 0 + Prom 16667 - 16726 78.5 20 13 Tu 1 . + CDS 16896 - 17219 330 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 21 14 Op 1 . - CDS 17293 - 17619 323 ## 22 14 Op 2 . - CDS 17651 - 17878 109 ## - Prom 18049 - 18108 2.5 + Prom 17598 - 17657 2.7 23 15 Op 1 . + CDS 17762 - 18271 652 ## COG0691 tmRNA-binding protein 24 15 Op 2 33/0.000 + CDS 18314 - 19447 1271 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 25 15 Op 3 35/0.000 + CDS 19471 - 20529 1084 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 26 15 Op 4 . + CDS 20543 - 21325 414 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components + Term 21517 - 21557 -0.9 + Prom 21497 - 21556 4.7 27 16 Op 1 11/0.000 + CDS 21632 - 23287 1685 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 28 16 Op 2 10/0.000 + CDS 23534 - 24622 1489 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 29 16 Op 3 30/0.000 + CDS 24639 - 26039 1540 ## COG0065 3-isopropylmalate dehydratase large subunit 30 16 Op 4 . + CDS 26050 - 26664 663 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 26683 - 26715 3.0 - Term 26745 - 26784 5.1 31 17 Tu 1 . - CDS 26846 - 28342 2102 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 32 18 Op 1 8/0.000 - CDS 28445 - 29092 623 ## COG4566 Response regulator 33 18 Op 2 . - CDS 29089 - 30885 1152 ## COG0642 Signal transduction histidine kinase 34 19 Tu 1 . + CDS 31384 - 32109 599 ## COG1280 Putative threonine efflux protein + Term 32291 - 32331 1.0 35 20 Tu 1 . - CDS 32130 - 33416 982 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 33481 - 33540 2.0 - Term 33656 - 33701 12.8 36 21 Op 1 . - CDS 33746 - 34921 1349 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 37 21 Op 2 . - CDS 35049 - 36254 1263 ## lwe0497 membrane protein - Prom 36341 - 36400 4.1 38 22 Tu 1 . - CDS 36537 - 37295 658 ## COG2071 Predicted glutamine amidotransferases - Prom 37355 - 37414 3.5 - Term 37385 - 37430 9.2 39 23 Tu 1 . - CDS 37456 - 39714 2123 ## ZPR_0612 membrane protein - Prom 39837 - 39896 6.4 40 24 Tu 1 . - CDS 39928 - 41514 1013 ## COG0477 Permeases of the major facilitator superfamily - Prom 41728 - 41787 4.3 - Term 41835 - 41876 0.4 41 25 Tu 1 . - CDS 41886 - 42443 355 ## + Prom 42610 - 42669 1.6 42 26 Op 1 . + CDS 42729 - 43352 575 ## gi|302860851|gb|EFL83928.1| hypothetical protein HMPREF0189_01007 43 26 Op 2 . + CDS 43359 - 44489 589 ## COG0790 FOG: TPR repeat, SEL1 subfamily 44 27 Tu 1 . + CDS 45213 - 45494 323 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 45545 - 45589 9.9 45 28 Op 1 . - CDS 45622 - 46416 503 ## COG1180 Pyruvate-formate lyase-activating enzyme 46 28 Op 2 . - CDS 46450 - 46650 152 ## Rpal_2641 hypothetical protein - Prom 46688 - 46747 3.7 47 29 Tu 1 . - CDS 46785 - 48833 1558 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 48925 - 48984 3.9 48 30 Tu 1 . + CDS 50568 - 52427 1646 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 52435 - 52482 11.0 + Prom 52510 - 52569 3.3 49 31 Tu 1 . + CDS 52638 - 54479 1256 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 54491 - 54535 7.9 + Prom 54714 - 54773 4.2 50 32 Op 1 13/0.000 + CDS 54803 - 56272 2024 ## COG0516 IMP dehydrogenase/GMP reductase 51 32 Op 2 . + CDS 56476 - 58041 1729 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 58083 - 58119 4.2 - Term 58656 - 58695 1.1 52 33 Op 1 . - CDS 58778 - 60490 819 ## 53 33 Op 2 . - CDS 60494 - 61120 384 ## 54 33 Op 3 . - CDS 61104 - 61610 338 ## 55 33 Op 4 . - CDS 61607 - 62401 721 ## 56 33 Op 5 9/0.000 - CDS 62434 - 63327 936 ## COG2064 Flp pilus assembly protein TadC 57 33 Op 6 8/0.000 - CDS 63346 - 64224 538 ## COG4965 Flp pilus assembly protein TadB 58 33 Op 7 . - CDS 64221 - 65495 1063 ## COG4962 Flp pilus assembly protein, ATPase CpaF 59 33 Op 8 . - CDS 65486 - 66655 1087 ## Meso_0608 TadE-like 60 33 Op 9 . - CDS 66671 - 67273 463 ## 61 33 Op 10 6/0.000 - CDS 67299 - 68864 1243 ## COG4964 Flp pilus assembly protein, secretin CpaC 62 33 Op 11 . - CDS 68921 - 69793 560 ## COG3745 Flp pilus assembly protein CpaB 63 33 Op 12 . - CDS 69811 - 70212 275 ## 64 33 Op 13 . - CDS 70235 - 70429 277 ## 65 33 Op 14 . - CDS 70452 - 73070 1934 ## - Prom 73101 - 73160 2.5 66 34 Tu 1 . + CDS 73720 - 74676 619 ## COG0583 Transcriptional regulator + Term 74681 - 74736 6.2 + Prom 74718 - 74777 2.6 67 35 Tu 1 . + CDS 74838 - 76676 1864 ## SEN3775 possible transferase 68 36 Tu 1 . + CDS 77247 - 77942 600 ## COG0288 Carbonic anhydrase 69 37 Op 1 21/0.000 + CDS 78326 - 79372 1189 ## COG0547 Anthranilate phosphoribosyltransferase 70 37 Op 2 13/0.000 + CDS 79405 - 81015 873 ## COG0134 Indole-3-glycerol phosphate synthase 71 37 Op 3 37/0.000 + CDS 81066 - 82301 1286 ## COG0133 Tryptophan synthase beta chain 72 37 Op 4 . + CDS 82359 - 83186 384 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 83217 - 83265 5.3 73 38 Op 1 . - CDS 83288 - 84811 1052 ## COG4145 Na+/panthothenate symporter 74 38 Op 2 . - CDS 84808 - 85170 268 ## - Prom 85316 - 85375 3.9 - Term 85319 - 85349 0.3 75 39 Op 1 3/0.000 - CDS 85400 - 86302 556 ## COG1573 Uracil-DNA glycosylase 76 39 Op 2 20/0.000 - CDS 86347 - 86868 264 ## PROTEIN SUPPORTED gi|91774768|ref|YP_544524.1| SSU ribosomal protein S18P alanine acetyltransferase 77 39 Op 3 . - CDS 86910 - 87659 815 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone - Prom 87714 - 87773 3.9 + Prom 87773 - 87832 2.9 78 40 Tu 1 . + CDS 87878 - 88498 354 ## RHA1_ro06009 TetR family transcriptional regulator 79 41 Tu 1 . - CDS 88559 - 89029 190 ## - Prom 89128 - 89187 1.8 + Prom 89438 - 89497 2.8 80 42 Op 1 40/0.000 + CDS 89521 - 90243 852 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 90280 - 90309 2.8 + Prom 90311 - 90370 3.6 81 42 Op 2 . + CDS 90410 - 91978 1226 ## COG0642 Signal transduction histidine kinase + Term 92003 - 92049 13.1 - Term 91990 - 92035 14.8 82 43 Tu 1 . - CDS 92125 - 92418 273 ## + Prom 92984 - 93043 3.6 83 44 Tu 1 . + CDS 93085 - 94617 1557 ## COG0471 Di- and tricarboxylate transporters + Term 94647 - 94683 4.6 - Term 94690 - 94724 -0.9 84 45 Tu 1 . - CDS 94754 - 96187 1414 ## COG0513 Superfamily II DNA and RNA helicases - TRNA 96372 - 96448 84.5 # Met CAT 0 0 - Term 96567 - 96603 8.8 85 46 Tu 1 . - CDS 96658 - 98997 2675 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Term 99623 - 99666 10.1 86 47 Op 1 . - CDS 99691 - 102444 2726 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 87 47 Op 2 . - CDS 102615 - 102887 124 ## 88 47 Op 3 5/0.000 - CDS 102945 - 105545 2106 ## COG0358 DNA primase (bacterial type) - Prom 105637 - 105696 2.1 - Term 105635 - 105689 11.0 89 48 Op 1 9/0.000 - CDS 105779 - 106228 238 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 90 48 Op 2 . - CDS 106292 - 106504 327 ## PROTEIN SUPPORTED gi|171058469|ref|YP_001790818.1| ribosomal protein S21 - Prom 106536 - 106595 2.9 + Prom 106604 - 106663 5.5 91 49 Op 1 8/0.000 + CDS 106704 - 108590 1050 ## COG0642 Signal transduction histidine kinase 92 49 Op 2 . + CDS 108583 - 109278 423 ## COG4566 Response regulator 93 49 Op 3 1/0.056 + CDS 109278 - 110705 907 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 110707 - 110766 1.6 94 49 Op 4 . + CDS 110824 - 112314 1264 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 112324 - 112387 15.4 + Prom 112502 - 112561 3.0 95 50 Op 1 . + CDS 112659 - 112916 392 ## + Term 112950 - 112983 4.5 + Prom 112931 - 112990 1.8 96 50 Op 2 . + CDS 113068 - 114132 672 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase + Term 114148 - 114190 5.6 - Term 114208 - 114263 14.3 97 51 Op 1 16/0.000 - CDS 114297 - 114464 234 ## PROTEIN SUPPORTED gi|217969673|ref|YP_002354907.1| ribosomal protein L33 98 51 Op 2 . - CDS 114481 - 114714 361 ## PROTEIN SUPPORTED gi|91789646|ref|YP_550598.1| 50S ribosomal protein L28 - Prom 114920 - 114979 3.1 + Prom 114928 - 114987 1.7 99 52 Op 1 . + CDS 115076 - 116095 413 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 100 52 Op 2 . + CDS 116201 - 116692 635 ## COG2606 Uncharacterized conserved protein + Term 116716 - 116757 8.1 - Term 116704 - 116744 6.3 101 53 Op 1 1/0.056 - CDS 116776 - 118251 1634 ## COG0144 tRNA and rRNA cytosine-C5-methylases 102 53 Op 2 . - CDS 118317 - 118973 636 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN - Prom 119153 - 119212 3.6 + Prom 119041 - 119100 2.0 103 54 Op 1 16/0.000 + CDS 119270 - 120268 354 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 104 54 Op 2 16/0.000 + CDS 120442 - 123312 3285 ## COG0060 Isoleucyl-tRNA synthetase 105 54 Op 3 . + CDS 123313 - 123864 501 ## COG0597 Lipoprotein signal peptidase + Term 123917 - 123960 8.6 + Prom 123905 - 123964 5.4 106 55 Op 1 . + CDS 124063 - 124896 264 ## gi|260888440|ref|ZP_05899703.1| putative glycosyl transferase, group 1 107 55 Op 2 . + CDS 124958 - 125170 68 ## + Prom 125182 - 125241 3.4 108 56 Op 1 5/0.000 + CDS 125274 - 126515 1115 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 109 56 Op 2 . + CDS 126533 - 126979 540 ## COG0756 dUTPase + Term 127012 - 127060 11.6 - Term 126998 - 127050 13.3 110 57 Op 1 . - CDS 127108 - 127755 740 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 111 57 Op 2 . - CDS 127800 - 129044 496 ## COG0675 Transposase and inactivated derivatives 112 57 Op 3 . - CDS 129055 - 129258 107 ## - Prom 129330 - 129389 3.4 + Prom 128992 - 129051 2.9 113 58 Tu 1 . + CDS 129073 - 129480 105 ## COG1943 Transposase and inactivated derivatives + Term 129513 - 129545 4.3 114 59 Op 1 5/0.000 - CDS 129535 - 130731 1312 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 115 59 Op 2 . - CDS 130862 - 131485 636 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 131591 - 131650 5.3 116 60 Tu 1 . - CDS 131689 - 132258 653 ## - Prom 132288 - 132347 2.8 117 61 Tu 1 . + CDS 132378 - 133331 384 ## PROTEIN SUPPORTED gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 + Term 133357 - 133399 5.5 - Term 133345 - 133387 8.5 118 62 Tu 1 . - CDS 133446 - 134027 783 ## COG0605 Superoxide dismutase - Prom 134053 - 134112 3.3 119 63 Tu 1 . - CDS 134185 - 136125 1110 ## COG1570 Exonuclease VII, large subunit - Prom 136270 - 136329 2.8 120 64 Op 1 . + CDS 137077 - 138147 923 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 121 64 Op 2 . + CDS 138210 - 138485 299 ## 122 64 Op 3 . + CDS 138482 - 139243 728 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase + Term 139277 - 139315 6.2 - Term 139265 - 139303 6.2 123 65 Tu 1 . - CDS 139313 - 140443 774 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 140692 - 140751 2.9 + Prom 140375 - 140434 1.7 124 66 Op 1 . + CDS 140502 - 140693 60 ## 125 66 Op 2 . + CDS 140718 - 140840 58 ## + Term 140881 - 140927 7.0 126 67 Tu 1 . + CDS 140997 - 142601 1918 ## COG0747 ABC-type dipeptide transport system, periplasmic component 127 68 Tu 1 . - CDS 142705 - 142845 96 ## - Prom 142873 - 142932 2.7 + Prom 142859 - 142918 4.3 128 69 Tu 1 . + CDS 143026 - 143679 952 ## COG0563 Adenylate kinase and related kinases + Term 143719 - 143759 6.1 + Prom 143771 - 143830 1.7 129 70 Tu 1 . + CDS 143862 - 145373 1381 ## COG0277 FAD/FMN-containing dehydrogenases + Prom 145423 - 145482 3.4 130 71 Tu 1 . + CDS 145518 - 146753 973 ## gi|302860473|gb|EFL83550.1| conserved hypothetical protein - Term 146770 - 146821 17.2 131 72 Op 1 . - CDS 146833 - 147876 220 ## PROTEIN SUPPORTED gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase 132 72 Op 2 . - CDS 148041 - 148493 191 ## PROTEIN SUPPORTED gi|90021194|ref|YP_527021.1| ribosomal protein L20 133 72 Op 3 1/0.056 - CDS 148459 - 150303 2349 ## COG1217 Predicted membrane GTPase involved in stress response 134 72 Op 4 26/0.000 - CDS 150339 - 151241 1021 ## COG0130 Pseudouridine synthase 135 72 Op 5 32/0.000 - CDS 151255 - 151617 505 ## COG0858 Ribosome-binding factor A - Prom 151692 - 151751 1.7 136 72 Op 6 20/0.000 - CDS 151774 - 154623 3664 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 137 72 Op 7 32/0.000 - CDS 154818 - 156362 982 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 138 72 Op 8 1/0.056 - CDS 156370 - 156930 693 ## COG0779 Uncharacterized protein conserved in bacteria - Prom 156959 - 157018 3.0 - Term 157357 - 157395 2.2 139 73 Op 1 12/0.000 - CDS 157448 - 158650 1251 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 140 73 Op 2 . - CDS 158583 - 159320 411 ## COG1386 Predicted transcriptional regulator containing the HTH domain - TRNA 159524 - 159614 68.5 # Ser CGA 0 0 - Term 159649 - 159703 12.1 141 74 Op 1 8/0.000 - CDS 159730 - 161028 1599 ## COG0172 Seryl-tRNA synthetase - Term 161080 - 161116 0.8 142 74 Op 2 . - CDS 161161 - 162447 888 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Prom 162598 - 162657 2.7 - 5S_RRNA 162703 - 162774 94.0 # LTTRR5S [D:1..117] # 5S ribosomal RNA # Leptothrix discophora # Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix. Predicted protein(s) >gi|319804496|gb|ADMF01000025.1| GENE 1 3 - 425 347 140 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 5 133 438 564 570 101 39.0 9e-21 SPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYRFVLQSMM ERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRNRVAQYRW STETTARDQMFLELFFGESD >gi|319804496|gb|ADMF01000025.1| GENE 2 556 - 951 521 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|194288942|ref|YP_002004849.1| 50S ribosomal protein L19 [Cupriavidus taiwanensis] # 9 131 1 123 130 205 85 1e-51 MTMATELKMNLIEILEKEEMARLTAGKTIPAFRAGDTVIVSVNVVEGSRKRVQAFEGVVI ARRNRGLNSSFTVRKISSGEGVERTFQLYSPMIAGIEVKRHGDVRRAKLYYLRERSGKAA RIKERLVRKEA >gi|319804496|gb|ADMF01000025.1| GENE 3 1022 - 1786 559 254 aa, chain - ## HITS:1 COG:RSc0935 KEGG:ns NR:ns ## COG: RSc0935 COG0336 # Protein_GI_number: 17545654 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Ralstonia solanacearum # 1 240 1 242 262 259 54.0 4e-69 MRFDVVTLFPEIFSAVRDCGITARARMRGLWSINCWNPRDTATDLHRTIDDRPFGGGPGM VMMAEPLAQTIDAVRASGNCGRVLSFAPNGARLTDARVREIAAAKEPIVLVCGRYEGIDE RFLESYVDEVVSLGDFVLSGGELPACALIDAVVRQLPGAIKDLSASDESFATGLLDAPHY TRPEVWRGMPVPDVLLSGHHKNIGKWSREKSLALTLRTRPDLIRIADSSGLLTREDVKFL RTMGAKNISEGRRS >gi|319804496|gb|ADMF01000025.1| GENE 4 1797 - 2375 650 192 aa, chain - ## HITS:1 COG:RSc0934 KEGG:ns NR:ns ## COG: RSc0934 COG0806 # Protein_GI_number: 17545653 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Ralstonia solanacearum # 21 187 12 180 184 81 33.0 1e-15 MTSDSTLIHDAELPADSTDAPDEWVELGRTAGAYGFKGWVRIAPLASGEVLEHTRNWELV DTAGVRTPVRVKGLRRHGAGLIAKWDGCESKESADALRVKVGVLRSNFPQAGENAVWAID LVGCTAVNKDGVKLGTILSIGTNGAQDLFEIEYVDAAGVVKRFFIPNVKDVYVVEMKPEE KRVVFDWDPAWR >gi|319804496|gb|ADMF01000025.1| GENE 5 2601 - 2873 312 90 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|71908679|ref|YP_286266.1| SSU ribosomal protein S16P [Dechloromonas aromatica RCB] # 1 84 1 84 84 124 70 2e-27 MVIVRLARGGSKKRPFFNIHVCDSRTRRDGRFIERLGYYNPVAAGQATRLVVDLERLAFW QSNGAQLSDTVARLVKEFKAQPAAEAPAAE >gi|319804496|gb|ADMF01000025.1| GENE 6 3097 - 4035 1045 312 aa, chain - ## HITS:1 COG:SMc00728 KEGG:ns NR:ns ## COG: SMc00728 COG2025 # Protein_GI_number: 15966397 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Sinorhizobium meliloti # 1 312 1 309 309 220 48.0 3e-57 MTALLIADHDNVKLRPATACAVTALLQMTEAVDVLVAGNGCEAVAEEAAKIAGVRTVLLA QNAKLAQELPEVLAYTAAHEAPGYSHIFFCATALGKAAMPRVAAQLDRSAVSDVVAVKGP KTFVRGIYAGALLATVEVDEDVVVGAVRTTAFEPAGEADMPVRIENITVPEEAVNWDASQ FVRFTETESDRPDLVSAKVVVAGGRGLIDEAGFSSLEKLADKIGAAVGATRTAVDMGLCP NDWQVGQTGKMIAPDLYIGFGISGAIQHTAGIKDAKVIVAVNNDPEAPIFETADYGLLAD AAETCRALAAKL >gi|319804496|gb|ADMF01000025.1| GENE 7 4050 - 4799 872 249 aa, chain - ## HITS:1 COG:BMEI0096 KEGG:ns NR:ns ## COG: BMEI0096 COG2086 # Protein_GI_number: 17986380 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Brucella melitensis # 1 243 1 243 248 244 58.0 2e-64 MKILVAVKRVVDAKVKVRPLPDRSGPDTKLARMAINPFDEIAVEEAVELKEAGKVQEVVA VTIGGAKSVDVLRTAMAIGADRSIHVSTDEMMEPLAAAKILAKIAEREKPDLILMGKQAI DDDAAQTGPMLSELLNLPLAAFASEIELADGRLIVTRETDGGTQTISVTLPAVVTADLRL AEPRYVTLPSMAKARKKPVETVELASLGINTAPRQKLLGVEPPPARKAGVMVANVDELIQ KLRDEVHLL >gi|319804496|gb|ADMF01000025.1| GENE 8 5077 - 5520 566 147 aa, chain - ## HITS:1 COG:VC0553 KEGG:ns NR:ns ## COG: VC0553 COG1238 # Protein_GI_number: 15640575 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Vibrio cholerae # 21 139 24 146 153 100 50.0 7e-22 MEAWVAWLMELFRSEHIEFALFAAAFISATVLPGGSEAVLAGAVAGTPSRVVEFVLIAML GNALGGMTGWCIGRFIPERKKEGKALAWLHKYGYWALLMTWLPLFGDALPIAAGWLRLKA LPCFLLIALGKGLRYAVVACAVLPLAA >gi|319804496|gb|ADMF01000025.1| GENE 9 5546 - 6355 867 269 aa, chain - ## HITS:1 COG:RSc2684 KEGG:ns NR:ns ## COG: RSc2684 COG0345 # Protein_GI_number: 17547403 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Ralstonia solanacearum # 2 268 5 271 274 163 44.0 4e-40 MLTIGFLGGGNMAGALIGGLLAGGPRSDLKVHVTDLHEDKLARLAALGAQTHSGVGEWAA SCDLMVFAVKPQGMKTALASLMPFLNPDGAALTIAAGIEAAAYADWLNGYPLMRAMPNTP AMVGMGVSGLWIPAGISDTAANAARQVLAAAGKVVEVKTEADIDLVGAIPGSGPAYVFRF MEALEKAGIKRGLPPEAAHALALGTVLGAAVLADKSGEAFSKLRENVTSKGGTTAKALEV MNNRDIDGMMDEAVNAALKRTAEMKALFR >gi|319804496|gb|ADMF01000025.1| GENE 10 6389 - 6544 100 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLEGLAIGFASELSSAELFWNGGCWESLVQSLIVRTLTVDIPSSVEGLDFS >gi|319804496|gb|ADMF01000025.1| GENE 11 6769 - 7599 853 276 aa, chain + ## HITS:1 COG:mll3861 KEGG:ns NR:ns ## COG: mll3861 COG0834 # Protein_GI_number: 13473306 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Mesorhizobium loti # 27 274 19 266 267 219 43.0 5e-57 MNSRNQFFFQRRTLLSAALGAVAFSAIGTPLTVFAAAESDPAQQLDRIKKAGVIRIGTEG VFVPYSYHDEQGRLTGYDVELARAVAAKIGVQAQFIESSWDSLLAGVDAGRFDIVVNQVE ASAARRAKYDFSVPYTYDHTAILVRSDNNDIKGFDDLRGKRAAESATANSSRIAEAHGAV IVGVQDFSQAVELVVSKRADTALNSELSIADFLRKMPDVPVKVVATSTEAEEMCVLMPKG SQALKAAIDEAIESLRADGTLSKLSKQFLGRDVAVK >gi|319804496|gb|ADMF01000025.1| GENE 12 7661 - 8377 460 238 aa, chain - ## HITS:1 COG:VC0461 KEGG:ns NR:ns ## COG: VC0461 COG0325 # Protein_GI_number: 15640488 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Vibrio cholerae # 8 237 4 233 236 253 55.0 3e-67 MSELQPGLEKRLAHVKQMLSEAEEKAGRPQGCVKLLAVGKTFNQEALLECARAGALAFGE NYAQEGCTKIDWFRTNHPELHLEWHFIGPLQANKSRMVAERFDWVQTVDRLRIAERLSAQ RPDNLPPLNVLIEVNVDAEASKSGISPEELPALAAAVSELPRLRLRGLMSIPAPAETYEG KMKPLLAMASLFKAFQEKYPQADTLSMGMSADLTEAVEAGSTMVRIGSAIFGPRSYSV >gi|319804496|gb|ADMF01000025.1| GENE 13 8958 - 9671 357 237 aa, chain + ## HITS:1 COG:no KEGG:XCV1224 NR:ns ## KEGG: XCV1224 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris_vesicatoria # Pathway: not_defined # 27 178 44 193 217 70 38.0 5e-11 MTFPFAARTNAPNTRAASMEPLEVLLSTHNPQVDKLLGGGFPCKGFVELLTTGERRGEIS LLIHALTHVKRVVWILPPQGFTPYAPAFEAAGIDLSRQLFVVPASPEEAFRCAEAAVTSG EADAVVAWLAPFARDEDRRAVSRLALACTSRNVVLFGIRPASLACLPLTADLRVQFSPVH KGPEILSRIRTLRRRTFINASASAEIPLFAQAAEPAKPYDRQSTPLQHSLFPELIPA >gi|319804496|gb|ADMF01000025.1| GENE 14 9728 - 11005 653 425 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIPASEQWTALFLPQLLFAADPERLHSRGPTPTALLIEDRIAARNREAVRLGVRRFMNA KEALLQTPALQLERSGQLIGQELSSILLSIAQSFGAALLLQAPNSGAAAIIVNTDQSAAQ LLLDTVLRLKFEAFGGSGSSPLNALNAAVEEAKSVHADYDAQALLMHTVLKENLIAKHAP ETFRLRIGVPSFNFKLQLERLEAAFAAWTKNVKTNAVSCTIRAYDPVGRILHTSSVLGGN LLIPIGKSAAAGRIRLHKLLYKAVLEEQAANLELEVVPFRQTAGGETATSPLVRSLTQIV GHSRVYQLALTGDLRPEAAQQRVPALNLSGSAHQREPLPAYAHILQASAADLPPIEIFPE IQSLPTSGGLPIFNGPLELLDGPKRLSSAAKDPRRYYRARSATGELLWIFQDLQNRRWFL QGRFA >gi|319804496|gb|ADMF01000025.1| GENE 15 11269 - 11934 398 221 aa, chain + ## HITS:1 COG:XF2273 KEGG:ns NR:ns ## COG: XF2273 COG1636 # Protein_GI_number: 15838864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 8 181 19 192 236 175 46.0 8e-44 MTEAIHPVLLHSCCAPCSSAILEWLTQNGYAPTVFYFNPNIFPAQEYLTRKNECQQYCRK LGIPFVDGDYDHALWREAVKGLEHEPERGLRCRACFGVRMLATAKCAQRLGIESFTTTLA GSRWKRLDQIREAAEEAARLTPGTRYWDMNWRKGGLQQRRGELLAQEGFYNQLWCGCEFS MGHLTMRAPEELPSYVRDFVKQLGSAKNKDETLPASPSPVQ >gi|319804496|gb|ADMF01000025.1| GENE 16 12091 - 13923 2470 610 aa, chain - ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 5 606 8 609 611 810 64.0 0 MRISKTAIAVSVLSLFAATMVPATSMAAGGASGAAVKYAKQGQIGEVITNPYKIAPLTAI IRSGGYALSDVSVRIVPKPNGSEIKYDVDRSEVLTHGGIPVFGLYPDYVNTVEVSYTRTD LKGEQKKISESYQIYAPPVYTEGNGTVSQKSTMFDTKVVKMDGEFKDRLYLVNNLLVSPP KGSRVVWNNPSGGALEWCFYPQNAIIDATGAVRWYMNVDSIYDMENVYHGGVMMGFQQGA DGALTWGYGQRYVKYDIMGREIFNRRLPAGYADFSHSFDQAQNGNYLLRVAANDVKRPDG RNVRTVRDVIVEVTPAGRVVDDWRLWEILDPYRDVVIKSLDQGAVCLNLDADSAGKTLSS ADLAAMDKEEHFGDITGVGIGRNWAHVNSVDYDPTDDSIIISSRHQSAIIKIGRDKQVKW ILGAPDGWQAKWSDKVLTPVDKDGKPLKCQQGKCEGTNFDWTWTQHTAFRIDSKSDKRFV YVTAFDNGDGRGLEQPALPEMKYSRAVVFKVDQEKRTVEQLWEYGKERGHSWYSPVTSLT QYEDDKDSIMVYSATPEMVLVKGKAVGAPSPYLQEFKWGSTEPAVEIRINGSMGYQAMPF RVQKAFNHAK >gi|319804496|gb|ADMF01000025.1| GENE 17 14106 - 15029 655 307 aa, chain + ## HITS:1 COG:PA2551 KEGG:ns NR:ns ## COG: PA2551 COG0583 # Protein_GI_number: 15597747 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 23 306 22 298 310 95 27.0 1e-19 MQLDRTPPYSSLLLLKTLCEKRNLAAAAEVLGLSASSASRHLSEMRELFDDKLFTRFPGG LVPTRRALEIAAQSEPILDGYAALMRPARFNPAEMTREVRIGCADNAPFSLFPKFADCLL QQAPNITISFLPLAEDRFLQLSSGELDFVVSPVMAVPPGLRSIVIGRNEYVLAAGFGSPL AAESRTSPLSTERVLQESFADVCFRTQPGAPYTTLREIAFPDWREARSSLRTTNFLSAVT TLSSSRLIMVLPKKTADTLANAGLVAIVETQAKSVVQTPHLIWHHRTDQDLAMQWVRSVL LSSAQET >gi|319804496|gb|ADMF01000025.1| GENE 18 15058 - 15252 57 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPVGLGAMRVRISFMVVLLEEDGLYCRSAHEATDYDTQAASGGSMGETSYFRLSQDYRAQ LSPV >gi|319804496|gb|ADMF01000025.1| GENE 19 15209 - 16603 1745 464 aa, chain + ## HITS:1 COG:RSc1179 KEGG:ns NR:ns ## COG: RSc1179 COG0008 # Protein_GI_number: 17545898 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Ralstonia solanacearum # 2 460 38 499 500 488 54.0 1e-137 MKEIRTRIAPSPTGMMHLGTARTAIYCWAVARHFGGKFLLRIEDTDQVRSTKEAVQVILD GMKWLNLDYDEGPVYQMDRLARYQEVVDEMLADGRAYYCYATPEELDALREQQRAAGLKP RYDGRWRPENCVGRPIPEGVKPVIRFRNPDEGSVTWNDAVYGPITVSNAELDDLIIMRNG IPTYNFAVVVDDWDMKVSHVIRGADHINNTPRQINIYKALGAEIPVFAHLPLICGQDGQK LSKRHGTVSVLEYEKQGYLPEAIFNYLARLGWGHGNMEKFSREELAEVFDLSDCSRASAR IDWKKLEWLNGQYMKEADDDRLAKLVASRIEARGGIIANGPDLASVCGLLKSRSATLEKL AEAALFFYAENAVNAEEAAKVLADGGREALELFAQKLKALDAETPENVYHCIQEVMAERS IPMKILANPLRVLVCRANRTPQIDRTLCLIGRDKVLARIAEGLA >gi|319804496|gb|ADMF01000025.1| GENE 20 16896 - 17219 330 107 aa, chain + ## HITS:1 COG:SPy1581 KEGG:ns NR:ns ## COG: SPy1581 COG1917 # Protein_GI_number: 15675470 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Streptococcus pyogenes M1 GAS # 2 106 4 108 112 102 52.0 2e-22 MIKNLEKSTVIKLKDQVPYLAGQVVSKTLAQNDSLSLTVFSFDKGEEISTHQSGGDAMVT VLEGTGRFTIDGEPHLVKEGETIVMPAKHPHAVYGEERFKMLLTVVF >gi|319804496|gb|ADMF01000025.1| GENE 21 17293 - 17619 323 108 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRITLCEIWAEGGATHAKERELDLEDGVIAEEALAQAGRKLASGEGLSVFGRRADVMTVL HDGDRLEISAPLLVDPKEARRRRAERQGDVRVVTAGRHGGKHRLDKEE >gi|319804496|gb|ADMF01000025.1| GENE 22 17651 - 17878 109 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEDEPCFVALLNGVVVGCALIQNARLGIFGCFFIAVGGHDGLLFQSISAADLTPASWAGW AAPKLGGIALRAARL >gi|319804496|gb|ADMF01000025.1| GENE 23 17762 - 18271 652 169 aa, chain + ## HITS:1 COG:RSc1424 KEGG:ns NR:ns ## COG: RSc1424 COG0691 # Protein_GI_number: 17546143 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Ralstonia solanacearum # 19 161 6 148 148 159 55.0 2e-39 MAANSNKKTTKNTQPRILNKRATYDYAIEERYEAGLVLHGWEVKSVRAGRAQINLAHIYI RDGELFLCNAHMNPADQACTHETLETNRTRKLLMHRREIMKLIGRVERQSYTLVPLNLHF KNGRVKVDLALARGKREYEKRDDESKKEWKREQERIMKKDARGRHILNG >gi|319804496|gb|ADMF01000025.1| GENE 24 18314 - 19447 1271 377 aa, chain + ## HITS:1 COG:FN0305 KEGG:ns NR:ns ## COG: FN0305 COG0614 # Protein_GI_number: 19703650 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 28 358 5 325 336 167 31.0 4e-41 MRLKNTFAKPSGVASGLLLSGLLALNGVEARLVSDDNGTSVDVPEHISRIVVTNILPLAS AVTMYLGDGSRIVGMHPASMSAAKSGLLGELHPEVLQADTHFIQGANLNLESLMALKPDL VLVNASDRRMLDRVRAAGLTAFGISAVKWHYDVEATYEGWMRSLKALFPDAKANSAAMAE KFRHYRTLIAERTSNLSDAQRRTVLFIVRTDARQLVVSGEKFFGEYWAKAVGAKNAAHEL KAENANAVVTMESIYAWNPDIVLLTNFTPLQPNDLIEGRDAGRDWTSVKAVKDGRVYKMP LGLYRSFTPTADTPLTLLWLAKTIYPERFADIDLQAETEHFYRDVFGLSLTEAQIKTIYA PQARASVGLTGSVRSSR >gi|319804496|gb|ADMF01000025.1| GENE 25 19471 - 20529 1084 352 aa, chain + ## HITS:1 COG:MA1234 KEGG:ns NR:ns ## COG: MA1234 COG0609 # Protein_GI_number: 20090098 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 43 346 30 337 343 234 43.0 1e-61 MHESVVDPQPAPNSADLAAENRRRTALKLLGIAAVIAAAAVFSLCAGRYGLSIADILDAL LHPNAGTAASNVVWHVRLPRILLALLAGGGLALSGAAFQALFANPLAAPDTLGVATGASF GAVLAILFGLPAAGIQMGAVLSGAAAILLVMLVSRTRPGESGSILMIVLSGMVVGALFTA FVGIVKFAADPQDALPSITFWIMGSLTGAGLPQILACLPLLVIGSAVLLLLRWRLNILAL PADEAASFGVNTQALRWTVILAATVVTASVVSICGLIGWVGLLVPHAARMLFGSANERVL PACLLLGGLFLLLIDTAARSLSEAEIPVSILTAIVGAPVFILLLRRTGGRFG >gi|319804496|gb|ADMF01000025.1| GENE 26 20543 - 21325 414 260 aa, chain + ## HITS:1 COG:FN0307 KEGG:ns NR:ns ## COG: FN0307 COG1120 # Protein_GI_number: 19703652 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Fusobacterium nucleatum # 1 243 4 242 264 199 41.0 3e-51 MQIEVRNGAFHYPNGKSVLQSVNFSFDGRGVFAVLGPNGAGKTTLLKCLLGLLPWSSGAS FFNGRDRREWSTREFWRRTAYVPQARASAFAPLTLRELVVLGRSARIGAFSQPSRTDWTA CDHAMELVGIRVLAERLTTEVSGGQLQLAYIARALAAEPELLVLDEPESSLDFKNQAAVL NVIDQLTSSGLGVILNTHFPAHALARAASGILVPQGKPPIFGTAAELFSEAKLSALFGID VRIRTLDFDGRQTPVVAAVS >gi|319804496|gb|ADMF01000025.1| GENE 27 21632 - 23287 1685 551 aa, chain + ## HITS:1 COG:Cj1719c KEGG:ns NR:ns ## COG: Cj1719c COG0119 # Protein_GI_number: 15793022 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Campylobacter jejuni # 1 513 1 509 511 659 63.0 0 MADNRVIIFDTTLRDGEQALPQSLSMRQKLQIALALEELGVDVIEAGFPVSSQGDFESVQ TIAQTLKRSIPCGLSRAILKDVECAGEALKVAEHFRIHTFIATSSIHVKDKLRKSFDDVL AMGVAAVKCARQYTDDVEFSCEDAGRTPIDQLCRMVEEAIEAGATTINIPDTVGYTVPME FGGIISQILNRVPNIDKAVLSVHCHNDLGMATANSLTAVQMGARQIECCMNGLGERAGNC SLEEVATAIRLRGKVLGGVETGIVSKNIARTSMLVSKICHEPVPAHKAIVGSNAFSHSSG IHQDGVLKNRETYEILTPESVGFASNTMLMTARSGRHMIQDCLRKLGYADDEYDLNDIYA RFLKLADRKGQVFDYDLEALLFFTKLDEEDDLYHLDQMNVMSGSNGSIPTATVRLRVGRR TRTESSIGNGPVDAVFNCITHLTGVKFTLKSYEISANGSGMDALGQVDVTIESEDGRIFH GMGLSTDVIESSCLALLRAINNIERAKRIQSEKKRPGHTAKFYKAEAESLGDDADKPAKP VRKPRTRAPKA >gi|319804496|gb|ADMF01000025.1| GENE 28 23534 - 24622 1489 362 aa, chain + ## HITS:1 COG:HI0987 KEGG:ns NR:ns ## COG: HI0987 COG0473 # Protein_GI_number: 16272925 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Haemophilus influenzae # 3 361 2 358 358 498 68.0 1e-141 MTRNHRIAVLAGDGIGPEVMREALRVLDAAASKFGFTVERTEELVGGAAIDACGTPLPEK TIAACDAAEAILFGSVGGPKWDHLPHKQRPEAGALLPLRKRYKLFCNLRPARIFPGLDSL SPLRADISARGFDMVIVRELTGGIYFGTPKGRTGEGEDEKAFDTEVYSRREVRRIAKAAF EAAKGRRKHVTSVDKANVLATSVLWRETVDEVARDYPDVKLEHVYVDNATMQLIRDPSQF DVMLCSNIFGDILSDECAMITGSMGLLPSASIGEGGFGLYEPAGGSAPDIAGKGIANPIA QILSVAMMLRYSLNEPQAADAIEAAVTDTLAAREVTADLARAAGTKPLNTREMGDAICRR LA >gi|319804496|gb|ADMF01000025.1| GENE 29 24639 - 26039 1540 466 aa, chain + ## HITS:1 COG:Cj1717c KEGG:ns NR:ns ## COG: Cj1717c COG0065 # Protein_GI_number: 15793020 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Campylobacter jejuni # 1 466 3 468 470 619 63.0 1e-177 MEKTLYEKVYDAHVVMQKPGELPLLYIDRHIIHEVTSPQAFAGLRAAGRKLRRPDLMLAT MDHDISTRKPTLDACMPLAKKQVTTLMANCQDFGVTLYGLGNPGQGIVHIVGPQSGFTLP GTTLVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTLKQQRLKTMRIRCDGRLRPGVYA KDLILAIAGKLTTAGGTGYAVEFAGDAVKALTMEGRMTLCNMAIEMGAKVGMVAPDEVTF EYVKGRLFAPKGAEWDEAVAYWKTLATDEDAQFDKEVVLDAAALEPQVTWGTNPGQEGAL TGCVPTLESFDNPVARQSAEAALAYIDLKPGQKLIGTPIDTVFIGSCTNGRIEDFREAAR VAKGRKVAPGVRALAVPGSMAVREMAEAEGIAKILSDAGFEWRLPGCSMCLAMNDDRAEE GSRVASTSNRNFVGRQGKGSRTHLMSPASAAAAAIAGAIADPRDYL >gi|319804496|gb|ADMF01000025.1| GENE 30 26050 - 26664 663 204 aa, chain + ## HITS:1 COG:leuD KEGG:ns NR:ns ## COG: leuD COG0066 # Protein_GI_number: 16128065 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Escherichia coli K12 # 2 198 3 199 201 252 61.0 4e-67 MQKFTRFTSKAVPLNRANVDTDQIIPKQFLLAVDRKGFGHHLFHDHRWLDAEETKPNPDF VLNFPVYKGAGILVAQANFGNGSSREHAPWALLEYGFRCVIAPSFADIFKNNALGNGLLP VELKQSEIDQLFQVLEANPGMEITVDLEKQTVDAGSLHFTFTVDPFRRWMMLEGLDAIGL TLQDEDKIAAYEASMPAWRVHALH >gi|319804496|gb|ADMF01000025.1| GENE 31 26846 - 28342 2102 498 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 27 490 60 490 502 136 27.0 1e-31 MKQVLIAAAVAMTFAPAWAADQTYNVDVVVVGAGAGGTVAAVSAVEGGLKTLMLEKNAFA GGAGNFMEGSFAAESFMQKEKGVKLTKIQAFNEMAAYHHWRINAPLVKAFVDLSGDTIQW VYDHGVHWKEVKTAWRDKADLTWHIYPSAGSLPKAMVETFKAKGGTLLLSTPAEKLIYKD GKVEGVVAKNAKGDTITVNAKNVILATGGYNFNVDMVKKLTGIDMIPVGAPGRTGDGIKM AMDVGAIGDNMGPMMINGAFMPAEGEAICNGANKEVRALFRQGLLYVDSTGSRFFNEELT IDWPQASNAIARTGEWTYIVFDEATKREFSTEGKGYPNPCGNFILRHQAATQLDALLKAN EAKGNVFIGNTIEEVAKKAGMDPATLKASADMMTKFAKQGRDDQFGKDKYYLRAVSEGPF YVVRGKLNTLTSLNGVKVNADLQVLDKNDHVIQGLYAIGHDAGGVYGDSYDLKVGEGTAS AFAINSGRMAVRKILADK >gi|319804496|gb|ADMF01000025.1| GENE 32 28445 - 29092 623 215 aa, chain - ## HITS:1 COG:SMa1686 KEGG:ns NR:ns ## COG: SMa1686 COG4566 # Protein_GI_number: 16263379 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Sinorhizobium meliloti # 4 212 1 209 213 121 36.0 9e-28 MKSMKPQEPLIRVVDDEEEVRDSLKFMLECEGWLVSAYASGFDLLKDFDRSRPGCILLDV RMPDLSGPELQEKLNLMGSRVPIVFITSYSDIHAAIATLKAGADDFLLKPVDTEKLLEVV AHTVERSQLLAAGAVLPENLAASAASLTERPRRVLDLMMDGMNDAAIAERLNLSERTVQV YRAQIYKAYGVHSVKQFALLIPRLKAALSSADADS >gi|319804496|gb|ADMF01000025.1| GENE 33 29089 - 30885 1152 598 aa, chain - ## HITS:1 COG:PM0724 KEGG:ns NR:ns ## COG: PM0724 COG0642 # Protein_GI_number: 15602589 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pasteurella multocida # 142 575 168 571 571 125 26.0 3e-28 MLAYGENNYQPGETDIRRPLVAHLRRMMPDVHFQFVEYELPALSEAVKRHEVDYALMSAG QYVELRSYGAYALATVYTARFPDPNRFTAALFVTTADHPEIQTIADMKGARAVFNSQANF INYQLPLAAIANAGFNPDRFFFKQHFTNDKPQEVLRLLLERKADIGVFRVCEYETLIAKW PQLKQSFRPTALVSGGNQSCLRSTELFPGWTVALTTDNMAPQLTKRMVETILAMPIDPSS GMGWSVATEFSRVNDVFHVLRIGPYAYLRDWTLSRIWRDFWPLIAAALALLAGFVFHSVS VERLAQSRARELNDAYVRQREIEDKALKTEERLAALSRLGVVSQLSSIFAHEMGQPLSAI RYRARALKTLLAAPTERRDLMNDCLKTIDAQSAKAARILQKVRAYAKGETSREAPVRLDL LVETAAADLRRSGRLTVPTRVKTVEVEIRGDELELGLAVLNILKNAAEAAAGGINGEDGA SVRVNLSANGRCARLQVINTGRRLAPGELERHMAPMSSEKKEGIGLGIVIIQSIAEAHGG SFSLRALEAGGAEAVLELPLKFEGEAADREIQETCDVKKSMPSGLAPNTLDNKEEPKK >gi|319804496|gb|ADMF01000025.1| GENE 34 31384 - 32109 599 241 aa, chain + ## HITS:1 COG:PA5249 KEGG:ns NR:ns ## COG: PA5249 COG1280 # Protein_GI_number: 15600442 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 29 226 9 194 209 83 30.0 3e-16 MDGVLLYTCCPLSHPHSTVRFLMNDLPLYFTLTFITILSPGAGVLFTVTSALRSGFQDAW QAPLGNVLASACVAVACAAGIGAILTASPLVFSIVQGLSALVLLYLAWRSWHAPANGFAS LADPAAAVHHPSAPPAKQPHGASLFTSAFLLQLTNPMLYVFQVSFLPQFITPSDPYVPQA ALLIAIFAGNGIVIHFAYSYAAAWARKFLASPRAAQLINRISALLFCCFGVSVLLKALIG S >gi|319804496|gb|ADMF01000025.1| GENE 35 32130 - 33416 982 428 aa, chain - ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 32 424 26 410 414 165 30.0 1e-40 MHDLNWAQTDFTEQSQAFAEKIFADVRLLSQSPAPLTGVTRTSYSSEEGRVLKYLSDVCC GLGLQVETDPAGNVWGTLRGSDPELPAVVSGSHCDSVPDGGNYDGLAGIVAALCTARWMQ YLGFSPKRDFRVVIMRGEEEGLLGSLGMLGQLTEDDLSRRMRSGSAGPTLRELLTGIGVD PAAVSSGKHCVDFAKIAAFIEVHIEQSARLDNAVTDRVGVVTGIRGLIRHRTIQAIGETA HAGAVDFPYRKDAALACARFSSRLYDFWQHELSLGRDLVATTGVIRTSPSASMNKIAGEC IVSLDARSLSAAELNLFEKKVEAILQETAEETGVIFKTDPLMRIAPVEADEGVMKKLETS ADILKIGTQRMPSGAGHDAMNFAAAGVPFAMLFVANRFGSHNPNEYMAMDDFLNAAGILA RTVMDFDR >gi|319804496|gb|ADMF01000025.1| GENE 36 33746 - 34921 1349 391 aa, chain - ## HITS:1 COG:lin0542 KEGG:ns NR:ns ## COG: lin0542 COG1473 # Protein_GI_number: 16799617 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 3 386 5 388 393 316 42.0 4e-86 MTLQDLIAKYSDYQVEMRRYFHQHPEESAKEFKTAERIRAELDKLGVQWRPCGMGTGTLA RISGKQPGRTILLRGDIDALSVKEETGLPYASTNPGVMHACGHDCHISMLLTAVHMIHDI QDQLKGTVVFAFQPAEEIGRGAQSMIAEGALEGVDACFGMHVWSDVAAGKVAMRKGAMMA SGDRFKVKVIGKSGHGAQPQRAVDAVVMGAAIVQNLQSLVSRELDPIDTAVVTVGKFTGG TRFNVIAGTAELEGTTRAFNPEVRNSFAERITRIAKSTAEAMRGTAEVEYEYLVPVTIND PKMIDVAAGAAKKIFGEDGVLEAPQMMGGEDFSYYQEKIPGAMVLLGVRNEALGAVWPQH HGCYRVDESVLVKGAALHVQTALDFLGVELH >gi|319804496|gb|ADMF01000025.1| GENE 37 35049 - 36254 1263 401 aa, chain - ## HITS:1 COG:no KEGG:lwe0497 NR:ns ## KEGG: lwe0497 # Name: not_defined # Def: membrane protein # Organism: L.welshimeri # Pathway: not_defined # 8 401 4 396 396 270 40.0 6e-71 MTMAYNFMSAFVACLVIILLGEWLAKLTKGWIPSVFISAVIILCCFWTFLPKTVVADSKL LPVGSSVAIFLLIAHMGTLFSLKRLLEQWKTVVICLAGLAGMCGLAWVVCPLFMDKALVI TGLPPLAGGIVATTIMQKAANDLGLTSAAVFAISMYCIQGFAGYPLTAVCLKREAQRLLK DYREGRVEGTSKDATKIVAESIALPDGGTRAGLLATPASWNTPFFILLKLAIVGWIAFVL GMLTPVNGAIWALVMGVVFCRLGFLEPDVLSHTGSKDFLFLALIMFVYSGLADCTPSMLF DLIGPMLTLIVVGLIGMGIVAAIVGRILRISPYLGFANCLTALYGFPFDAIMTEKICNDE GATKDEVDYLMSRLFPSMIVGGFITVTITSVLLAGFFVKLL >gi|319804496|gb|ADMF01000025.1| GENE 38 36537 - 37295 658 252 aa, chain - ## HITS:1 COG:CAC1764 KEGG:ns NR:ns ## COG: CAC1764 COG2071 # Protein_GI_number: 15895041 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Clostridium acetobutylicum # 12 249 2 241 241 156 36.0 4e-38 MMPQATQTISRRPLIGVTGGLNEKGFLNIRNGYMQSVVRAGGIPVLLPLDAPEEILRDAF ERMDGVLISGGADIDPALYGEETLPECGALDPARDRQEMLMAKWSRSAGKPALGICRGCQ VMNVAAGGTLVQDIASTYHISKDVHSQPEDYAVTTHWVDLVPGTLAADVMGCEEVRVNSR HHQCVKDLAPGMVLDGRSRDDGIIESFHDPKHPFYLAVQWHPEMLSADRPEALALFEALV RKSQKIRDQQSA >gi|319804496|gb|ADMF01000025.1| GENE 39 37456 - 39714 2123 752 aa, chain - ## HITS:1 COG:no KEGG:ZPR_0612 NR:ns ## KEGG: ZPR_0612 # Name: not_defined # Def: membrane protein # Organism: Z.profunda # Pathway: not_defined # 1 722 9 752 762 487 41.0 1e-136 MELFVYTLLGLLAALACCDLFVGVSNDASNFLNSAVGSRTAPFWVILAVASVGVILGATF SSGMMEIAKTGVFVPEMLSFKEVMVIFCAVMVTDVLLLNTFNSLGLPTSTTVSIVFELLG GTIAVACWKIWANGYPLTDLGLYVNSGKALAMIMGILASVIIAFFTGLILQYFLRLLFTF NYEKIYRWLGGTLGGIALTSILYFLVVKGARGASFMQPEWIEWIETHTSIILISSFAFFT VIFQALILFFRMNIFPVIILAGTFALAFAFAGNDLVNFVGVPVAAMDSVMLWKAQPGMDP GMMMGGLRDVKVTPTVILGASGLIMCLTLWFSKKAHRVIQTAVNLSSATRGGKEQFGSSL PARLIVRSAIQMNEVIHQMLPKSVFSAIDSRFVKRKLPPGEVEPPFDELRASVNLVLAAI LISTATSMKLPLSTTYVTFMVAMGSSLADRAWDRESAVYRISGVLTVISGWFMTAFSAAT ACGFVATLMCWLGSPMMILGMITAFAIIVRTNLLSKQPEAVVEEAKHVYKGDQNSIRELL TTSVNHNLDLTLTLYSEGLEAFLREDYERLGELKNQAVTLYDEIMLRRGDYYSMALQGGG AKRDYDARNFYYRAFTSMKEVGHALRDQLGVAENYVANSHSPFRGQMRENTILLAKDLQL VRDNFTPQACTRILGMLDEAQQSFLVQIGTEQISLRKSELYLGYLLFAREVLNRYMMVKL LQTELEAATAKTAAVEAANAKLADRALEEGRK >gi|319804496|gb|ADMF01000025.1| GENE 40 39928 - 41514 1013 528 aa, chain - ## HITS:1 COG:lin2884 KEGG:ns NR:ns ## COG: lin2884 COG0477 # Protein_GI_number: 16801944 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 127 514 3 391 402 224 33.0 4e-58 MEEKKESVNVSPDPSEQRAPLSPSADEAQAASAGSAPMDPAKCGAHEIHCIEQEAELAEA RVRERVRTEAAEAERALDNAAHCASTEQKSVLAEEQPDKAQNTRLSSAKSPAPSDEQAVL EAQNSANWKMTLVILTTASVLMSLSYTMLIPFLPMYLLEELHVAQEDVNLWSGLVFSVSF LISGVMAPIWGALADKRSKKMMAVRAAALLAISYGLGGIVQNEWQLLAMRAFQGFAAGLW PACLAILSSSVPKTKLGFALGTMQGGLTAGGVIGPLVGGILAEAFGMRATFFLGAAALLT ITVLIIFKIKEPQKRRQPQSGTNSPRQKTNLLRIPVVQRMLITAGVVQMTILFQQPIMPL YVAELQGSMDRIVLVTGILFSAVGLSGVFASPVWGIAGQKWGYRPVLYSALLGTTIFGVI QAIPNDLWQFGFWRFIGGLAFAGIFPAINAVLTNSTEPEDRGRIFGLSYAAQQIGSVIGP IAGGALGMWLGLKFVIFFSGILLLPMLIWLYLKRPKVEASTAGNAKSL >gi|319804496|gb|ADMF01000025.1| GENE 41 41886 - 42443 355 185 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSIIRRAFAVGFCACIFLLGGCTTNVQQPADLSARSHDPRGLISGLPAAGEAVCLTAASD HSPTIDIAVRQALRDRGYKAVMLSAQESPRPKQCRFLVAVSGRGAMLPGDPPSMVALDYR DLYTGETQRAVWKLDRAATAWRRASADSNGVPYRTDVQNLLVTPAVGDFELILRDLVDQL FPAVR >gi|319804496|gb|ADMF01000025.1| GENE 42 42729 - 43352 575 207 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302860851|gb|EFL83928.1| ## NR: gi|302860851|gb|EFL83928.1| hypothetical protein HMPREF0189_01007 [Burkholderiales bacterium 1_1_47] # 8 138 11 141 157 78 33.0 2e-13 MSPSRPKLYNPKLVCACALLFTPIFGALLQARNWEEMGIPENARASRVWVRSTVWLIVVY LVLQALFRNEEIANWLGPYFLIVLWGSWMLTNGWRQLAFVNQTYGKNYDSLPIGRPMILG AAGWLFYGLISFTMALGLSLAGIEPLNQSAPENGVVIRIPEGSDKPVIEPLPAPDDKNAT TAPEHQDTTSPAAAPAPAADTTNPSHS >gi|319804496|gb|ADMF01000025.1| GENE 43 43359 - 44489 589 376 aa, chain + ## HITS:1 COG:mlr0590 KEGG:ns NR:ns ## COG: mlr0590 COG0790 # Protein_GI_number: 13470794 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Mesorhizobium loti # 24 331 141 454 577 84 30.0 3e-16 MPKQPDERFPIPQPQAFTEPVLDLLGGVARPRPLSGEEAIRRLNEMEARARAGDPESQAE LARRLLTEAPNARKNRRALILLRHAAAAGSATGLHLLALLHLRGQGLSQDLTKGVELLES AAYRGSKAAQADLAHALLDGIGTSVNTAKALYWLRLAAAQGDEQSALEAARILRDGESPS VHSENKQTLNESTALSPQNTHQAIFNTDHRQAEKYFTEAAKAGIPEAQYELAELLRRREV SERDPAAARKWMREAAFSGIVDAQFRIGVANWSGIGGKVDQREAVRWLCRAAEGGSAKAA AMLAGFLMTGNGLAYSPARAWALFMRAAKMGNENAAATAKILERQLPLQEKRVQRSLLRI KDSKTFLEKLIPRSER >gi|319804496|gb|ADMF01000025.1| GENE 44 45213 - 45494 323 93 aa, chain + ## HITS:1 COG:asr3935 KEGG:ns NR:ns ## COG: asr3935 COG0776 # Protein_GI_number: 17231427 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Nostoc sp. PCC 7120 # 1 93 1 93 94 74 44.0 4e-14 MNRLELVDRVAARNTASKAEVDRIIVSALEEIISAVRCGESVTLIGFGTFKAVDCAPRTG RNPSTGESIRIPGTKKPKFVPGTSFKELINETK >gi|319804496|gb|ADMF01000025.1| GENE 45 45622 - 46416 503 264 aa, chain - ## HITS:1 COG:RSp0965 KEGG:ns NR:ns ## COG: RSp0965 COG1180 # Protein_GI_number: 17549186 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Ralstonia solanacearum # 34 260 31 243 246 190 45.0 2e-48 MAELYSSAPQSRPVVEIFPQDSDTGHTSAEALRIAAITPFTTIDYPGKLSAVAFVQGCPW RCIYCQNPWMQPKDFDPSLSHDSWHRLEELLKRRRGLLDAVVFSGGEPTVDPALPDAVAR VKAMGFKVGLHTGGIIPARLARVLPMLDWVGIDVKAPPTDAVLYERVTGRSHAALHFLEA FRMLQKAGIPFECRTTAHPDYLPNTKLLELAVWLKSERVDTFALQIYRRPRGIFATLPAV GSDYPNELVVSALKGAVKTFIERR >gi|319804496|gb|ADMF01000025.1| GENE 46 46450 - 46650 152 66 aa, chain - ## HITS:1 COG:no KEGG:Rpal_2641 NR:ns ## KEGG: Rpal_2641 # Name: not_defined # Def: hypothetical protein # Organism: R.palustris_TIE-1 # Pathway: not_defined # 2 53 9 60 63 79 69.0 4e-14 MTEAKNTIELKDSERQPCEVWTRVMGYHRPVQSFNIGKKGEFEERVCFTEGAATHHGEIH RPCCGK >gi|319804496|gb|ADMF01000025.1| GENE 47 46785 - 48833 1558 682 aa, chain - ## HITS:1 COG:RSp0963 KEGG:ns NR:ns ## COG: RSp0963 COG1328 # Protein_GI_number: 17549184 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Ralstonia solanacearum # 11 667 5 657 683 1019 71.0 0 MCVMTESLPLHLIKRDGAVRDFDAEKIVQAVVKAGLATQEFDAARAREIVQTYVLPRLMK HDAARTPTIEWVQDAVEHGLYEAGCFPTLRAYIVYRESRAKARDAKKSWVNVESSINEYL DRQDWRVHANANQGYSLGGLILNVAGKVVANYWLNFVYPPEVGRAHREADIHVHDLDMLS GYCAGWSLRTLLQEGLNGVAGKIEADPPKHLSSATGQIVNFLGTMQNEWAGAQAFSSFDT YLAPYIRKDNLPYREVLQSIQELIYNLNVPSRWGTQTPFTNLTFDWTCPEDLRQQHPVIG GETMPFTYGELQPEMDMINRAYIEVMMKGDAKGRVFTFPIPTYNITPDFDWESENSLQLF DMTARYGLPYFQNFINSELKPNMIRSMCCRLQLDLRELLKRGNGLFGSAEQTGSVGVVTI NCARLGYLFKHDKEHLYERLSYLLELAKTSLEIKRKEIQRHIDGGLFPYTKRYLGTLRNH FSTIGVNGINEMIRNFTDDKEDITTEAGHAFALEFLDYVRAKLVSFQEETDHMYNLEATP AEGTTYRFAKEDKKRFPQILQAGTPSNPYYTNSSQLPVNFTDDPFEALERQDDLQRKYTG GTVLHLYMNEAVSSPQACRELVRRTLTNFRLPYITVTPTFSICPKHGYLSGRHDFCPKCD AELIAKKRSEYQKAEKERAVAS >gi|319804496|gb|ADMF01000025.1| GENE 48 50568 - 52427 1646 619 aa, chain + ## HITS:1 COG:VC2484 KEGG:ns NR:ns ## COG: VC2484 COG1022 # Protein_GI_number: 15642480 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Vibrio cholerae # 50 618 33 601 601 275 29.0 3e-73 MEKLSPKEAGLERIRDLDVLSTIPEMLALQVEKRPDAVGWKSWDPVKKSWRDWTFRQGYD EVQRWRHAFAGLGLTRGTRVAMLLPNCIEAVLFDQAALANALTPVPLHAIDTPKSSAYIL NDSGAEVLVTNKKLKWRLVREAAELPNLKLVVITDDDFADDPDADIPMLSLETWLAKTPD APLPPGPRSTDLAALVYTSGTTGNPKGVMLTHRNVLSNLRGVLQSLQPYADETLLSFLPL SHTFERTASYYLAVGTGLTLAFNRSIATLADDLKSIRPTILMSVPRVYDMIYGKLRDGLA KKPAYVRYLFNWAVEVGWRRFCRENGLPIEPSGRAWLDPLVAGFLDKKIGKQLRSVFGDR IHLYISGGAALNPAVAKVFLGLGVPIFQGYGMTETSPIIAVNKVGQNHPSTVGPKLDNIE VKLGDGGELLVRGPSVMQGYWHREEATRAILSDDGWLSTGDVAEIYQDGCIRITGRIKEI IVTSTGEKVPPADLEAAVETDPLFAQTLAVGDDRICIALVAVVNPDEWQRLCAELKLDPE DPKSLDSREAQQAALKRIKKAAADFPNYGVPRLVKLVREPWTIENGMLTPTLKLKRSIIT RRYASDIDALYEGIAPKKK >gi|319804496|gb|ADMF01000025.1| GENE 49 52638 - 54479 1256 613 aa, chain + ## HITS:1 COG:VC2484 KEGG:ns NR:ns ## COG: VC2484 COG1022 # Protein_GI_number: 15642480 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Vibrio cholerae # 39 611 30 599 601 304 32.0 4e-82 MTRSTLARLFDCVTIPALRRRTVSLWPDREAFRQFDYADNRWISLTWKAFEAQVLRWRHA FYASGLKPGDRAAMLLTNSIEAVIFDQAALAAGLIPVPLHAVDTPGSSAYILHDSGARIL VTSSRARWNALHAAAGETLPMLEQVVLLNELDDEVIDGVRISGVETWLARGNGTPSEALP PEPSPDDLAGLIYTSGTTGRPKGVMLTHANLVANVAQISDAVDITESDIYLSFLPFSHTF ERTVAHYAALAHGASMAFARSVQHIENDLADVQPTIMCTVPRVLERLYQKQQLELAKGSE VEQHRSQWAAEAGWRRFCRDNGLPVEPSAREALDETVLPVLDEDVGRKVRGLFGGRMKAI LCGGASLNQSVARYFCAMGVPLRQVYGLTETSPIVSLTRAEMNHPACVGQPVAQTQVRLG DRDELQVKGPQVMQGYWNKPAETKHAFTEDGWFHTGDQADLSDGGRVRIKGRIKEIIVTS TGEKIAPVDLEFAIQEDPLFEQVFVCGENRPFISAVLVLQPDLWKALCAEMELSADDPQT LHDRSMLRYLVKRVRAAAKDFPSYGIPRSIAVVDEPFTAENGLLTPTMKLRREKILSRWK DLIDGLYSGHPAA >gi|319804496|gb|ADMF01000025.1| GENE 50 54803 - 56272 2024 489 aa, chain + ## HITS:1 COG:RSc1429_3 KEGG:ns NR:ns ## COG: RSc1429_3 COG0516 # Protein_GI_number: 17546148 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Ralstonia solanacearum # 199 485 1 287 290 427 74.0 1e-119 MRLLQTALTFDDVLLVPAYSEILPRDTQLQTQLTRGLSLNIPMVSAAMDTVTEAKLAIAL AQEGGVGFIHKNMTADQQAAEVAKVKRHESGVVSEPITIGPEMLVGDVIALAREHRISGL PVVAEDGTVLGMVTNRDLRFETRMSVPVREVMTPRERLVTVHEGASLEEAKNLMHRHRLE RVLVVTKDFRLAGLMTVKDITKATDHPFAAKDAQGKLLAGAAVSVGQGTEERVEKLVDAG VDVIVVDTAHGHSKGVLDRVKWVKQHYPNLQVIGGNIATGEAALALVEHGADGVKVGIGP GSICTTRIVAGVGVPQISAISNVAEALQGTGVPCIADGGIRFSGDISKAIAAGANSVMMG GMFAGTEEAPGEVILYQGRNYKSYRGMGSLGAMGKGSADRYFQDNNQGNIDKFVPEGIEG MVPFKGSISAIIYQMIGGLRSSMGYCGCRTIDEMRTRARFVQITAAGMRESHVHDVKITK EAPNYRQAN >gi|319804496|gb|ADMF01000025.1| GENE 51 56476 - 58041 1729 521 aa, chain + ## HITS:1 COG:RSc1431_2 KEGG:ns NR:ns ## COG: RSc1431_2 COG0519 # Protein_GI_number: 17546150 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Ralstonia solanacearum # 203 521 1 338 338 499 73.0 1e-141 MSHDRILILDFGSQVTQLIARRVREAHVYCEVHPNDVSADFIREFAPKGIILSGSHMSAY EESNDQASQAVFEAGVPVLGICYGMQTMAQQLGGKVESGTKREFGYAEVRARNHSKLLEG IEDFQTEAGEGMLKVWMSHGDKVSELPPGFKVMASTPSCPIAGMFDEARGFYAVQFHPEV THTVKGREILQRFVLDICKCKPDWIMGDYAKEAVEKIRAEVGDEEVILGLSGGVDSSVTA ALIHRAIGQRLTCVFVDNGLLRKNEREQVRETFEKNMGLKLIVVDAIDRFMNALAGISDP EQKRKIIGREFVNVFQEEAAKIKNAKWLAQGTIYPDVIESAGAKTKKAKVIKSHHNVGGL PDTLHLKLLEPLRSLFKDEVRELGIALGLPAEMVYRHPFPGPGLGVRILGEVKREYADLL READAIFIEELRKADLYDKVSQAFVVFLPVKSVGVMGDGRTYEWVVSLRSVETSDFMTAK WSELPYDLLGRVSNRIINEVRGINRVVYDVSGKPPATIEWE >gi|319804496|gb|ADMF01000025.1| GENE 52 58778 - 60490 819 570 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSQHRCGLQRVLPHLKTRVRHFITDRRGAAAMFLGLGILPAMALGTGAVLVNREFMNLS AMQSAVDTSSIALAKIQSIGADSYLTTAVAQQWVDENSKLFAETLEVKSVLPTFAEKSIS VSAQYASKPRLTGAIGSLFSKKKELSVQAIAQFFPSSLEVVFTIDNSADSPAGQQVASGM EKVLNKLFEGKSYDKTIHVSVFAVGTHMNLGTKYADIISMESRALPKPGSKYFGSTETQY KHQKEILEGISPALVNDLLNPGGPGFDAGVALVARPDIAEDGIDGYLARLDYPPESEDEK FRLIVSDNRKLKEGNNDISYLTDYLAGFGRGLGGWWSTSSTVDAKDFFCVPDNWWTMGNH ADTRYAGWFSGDPNSWSGWRFSDLGEIGDGVVHFPMMGPLMPLLANSSTVSEITERVKQS IAVNTGSVDEHFTWSYRLLSPNWAKVWSDDGTYPAPYGSGTLKHAWINVGRPTGGGYSSP EDFDYDQPNILPGIFAKFAERKIVLHLILDDPPEGTMKDIEDAMDRYGKTLGWETIDLSD GKGSDLYERIAQNIQRPASMVRLVAKLTDN >gi|319804496|gb|ADMF01000025.1| GENE 53 60494 - 61120 384 208 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDPRSKHNSAMHQFLTSGRGAVAVEFAFVLPIILLIIWAFWQMSESYRLQWTLNRQTASL ADMLINQPEQLNFGGGTESVTLPLEQQFPVLIASANEMLKNAISKDAAGIRTGLTVEYAT GKITNDGVPVIYTFANGARCGGIPGTLPLVSLLGDGGGALTPPSRSSNAGIRVLRVQSCM QRKEAPAYLTLVAPKEFQSRYTTLRKED >gi|319804496|gb|ADMF01000025.1| GENE 54 61104 - 61610 338 168 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNALAFRSAFSAFLRSRLGAAGVEFALLLPMAAFVLAVALESARLSIAYALIERAVEEG IHEAKLNRGAEAETLVKAALEKWRFGVFDPSDLKLTFTSSSSMIDLLAGANPGAGTGGDS VHLKVDARLGVLEKVLPEGNPMKGKVEIHFFYINEPEKDKGAANGSAL >gi|319804496|gb|ADMF01000025.1| GENE 55 61607 - 62401 721 264 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRSFFPASLSLLLCSALLSGCVVTNDYIAFDSKAAPSPQIKRYDGNEWASERAVMVAAE KTNNWQTVISVGNDVIAKNPTNVEARIYLARAFTKMGDPRQALRVLSFISGVDTAELRIE RARALIALTDFEEAVKLLKPLTDGSDLQKLSAEDRRSAKSLAAVAYSMSKNYAAADKLYE ELLAELDNPIIRYNYARSLYLEGRAEDSLAQLQPIIDQVPAAKPAAVAALMKLGRENDVR RLLKGELDDEKIEELISAIKEKTK >gi|319804496|gb|ADMF01000025.1| GENE 56 62434 - 63327 936 297 aa, chain - ## HITS:1 COG:SMc02822 KEGG:ns NR:ns ## COG: SMc02822 COG2064 # Protein_GI_number: 15963899 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadC # Organism: Sinorhizobium meliloti # 130 297 159 327 327 107 37.0 2e-23 MNQTIIFALFVMAMLIVVCVGYSASQAWRSLLVEQRLNQIKGSGDSRLVRWEDLLTLIAR PLRRSRDLAAVERSMQQAGFIKPWQTDLFLLFRALVLIAAAVGGWLAIDIDPTHLVQKPL PPLAYLFLLFVAGRAPGWFLSELAERRQNRIRLFIPKAVDLLTICMSCGMSLEEAFDRVA SEIARRAPEVAKEFRMTRYEMLVVNRTVALKRLEARSGVREMKILANSLLQSIQYGTPLT EALQSIAAEARAGQLSELEQKAGRISAVIGVPLIVLVLFPVIALIIAPAAIELARAF >gi|319804496|gb|ADMF01000025.1| GENE 57 63346 - 64224 538 292 aa, chain - ## HITS:1 COG:SMc02821 KEGG:ns NR:ns ## COG: SMc02821 COG4965 # Protein_GI_number: 15963898 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein TadB # Organism: Sinorhizobium meliloti # 84 286 131 331 336 104 32.0 2e-22 MTKEFAALIFIGLLVLVVLVYAVFSARERSGAVEARLAAMSGLGGANNRLAKNAQLAAFL RQPECQATILVMMGALLLGWFLKLSIAAEVLLLVMVGAASWIIVRRWRLDRARRAFLSRF PEAVDNFTRSIQAGIPVDRALKILGEAYDDEFGRRVLKLCREMKVGLPFREALGNFADEL DDPDVDFFCEVLALNRETGSALSPMLASLSMMLRERRAIDRKLKALTSESRASARVLCLL PVFILGLQAFLNPSQLLFLVNDPAGRIVAGCALACMLAGFIIIQRMSRSLNG >gi|319804496|gb|ADMF01000025.1| GENE 58 64221 - 65495 1063 424 aa, chain - ## HITS:1 COG:SMa1568 KEGG:ns NR:ns ## COG: SMa1568 COG4962 # Protein_GI_number: 16263305 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Sinorhizobium meliloti # 19 371 82 434 497 348 49.0 1e-95 MEVVEQVNVDQGVYARLRSLIVERIDAEAALHMKPEELEEQVARTIANAVQTERLFLNGH EQRLLTREIVNDMIRLGPIQGAIDDPEVTDVLINGPDQVLVERRGKLELTSIRFRNAEHL LNLAQRITSAVGRRIDESSPMVDARLADGSRVNIIAPPLCLNGICISIRKFSRLVMSLDE LAARGAMTGEIAQFLKIAARARLNILVSGGTGSGKTTMLNALSQHIARDERIVTIEDAAE LRLDQPFVVRLETRPASLEGKGEVTQRDLLKNALRMRPDRILVGEVRGVEAFDMLQAMNT GHDGSLSTIHANSPADALLRLENMLNMGANQMSSSLIRRQLASALDLLVQVERDGRGMRR ITAVSEITADETGRDVIALPFFSFKHAADGAGGQYYRASPREPGFVEKLKVSGEYDQACE VLGL >gi|319804496|gb|ADMF01000025.1| GENE 59 65486 - 66655 1087 389 aa, chain - ## HITS:1 COG:no KEGG:Meso_0608 NR:ns ## KEGG: Meso_0608 # Name: not_defined # Def: TadE-like # Organism: Mesorhizobium_BNC1 # Pathway: not_defined # 72 302 88 320 580 78 29.0 5e-13 MTNTILNRRGVPAGLFVSDPRTAEALAAKLAENGIDVVQQTHGAFVWANIIQNTNFAQLK TVVIELPASGDLIEAVKALAKHLDAGTSLILLGRESSVVFYHQLKRAGATDYYPLTTAPE EIAYGVKASLEPQQEQEAPDGGRVIAVFGAGYGIGAGTTATVLAAELAQKAPVIVVDAGL LMPSVGSYLGVDVPGSLPKMLQAQDRLDAVLVNQSLVEPRKGLKLLDGYEPFGSGQRVTD CSRLVRELARQAPWQIWRIPVSTPYARSLAAQADFILPVAANTFTSMRCAQTISTLLADV KPEGKVWWIFNHRNASDTVKTEEAAKYLNTKFAAEVPFVKSLGENLIEPLRWLSGNNAFK KTLTPVTAALQSGAELNAAGASFWSRLWK >gi|319804496|gb|ADMF01000025.1| GENE 60 66671 - 67273 463 200 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNRIRNIQILFLLGAAALLSACTSVTTTVPSGRAPAFEARADQVVVIDPADVAAELHTQV EPLLAETAGRDRVIVVSYSLAPGDETLRSVLDFIKMRTAPGDVVKVERDFIAHLGLAVTV RDPKVSAYRWWNAQAVSDNFAHATARNLAQQAAVPSDLETPRALGDPNPQAAIGAVDRYQ RGSVRPFGDVSLEAGGGKSK >gi|319804496|gb|ADMF01000025.1| GENE 61 67299 - 68864 1243 521 aa, chain - ## HITS:1 COG:mlr6335 KEGG:ns NR:ns ## COG: mlr6335 COG4964 # Protein_GI_number: 13475294 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, secretin CpaC # Organism: Mesorhizobium loti # 34 457 15 395 432 183 31.0 8e-46 MPPFSRLRTCVLASAFLLTAAGALTAAPQQHAPDAHMSVSLYQGKALSFNEQIGAVFVAQ PSIASYQVVGNRKVVVFGSYPGKTSLMVLGTDGRTLYNGLVEVAYDVSSMEMALKSSFPK LKLQLVALNDGVAVRGKVETAQEAANVVAFLDAMLQVNPQQAQMAAADVSAAGQEGQQEK SGAATGTGTLGARIGKIINQLTVTTPNQVTVRVRFAEVNRKLSDQLGFKWKGSYSGSRGG ITFGSADNPIISNPNNSLGHLFDPATMAARFTFGSLFDAMASEELVSILAEPNLTVVSGE TASFLAGGQIPFQSSDGDGGFDIEFKDYGVLLSITPTILSGNRISLRLRPEVSERSDSNG IQFMGSTQPGFIVRRAESTIELASGQSFAIAGLLKNDFSNTVNKIPGIADLPIIGALARS KAFERGETELVIVATAYISTPSGEPYTIPNEEMYVPTIFERYFMDADPQVSSGTALKTAR KPSFVSEKYRLDSAPVVKPQPSAAAPSGKTSPADLVSEFIY >gi|319804496|gb|ADMF01000025.1| GENE 62 68921 - 69793 560 290 aa, chain - ## HITS:1 COG:SMc04112 KEGG:ns NR:ns ## COG: SMc04112 COG3745 # Protein_GI_number: 15963893 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein CpaB # Organism: Sinorhizobium meliloti # 1 249 8 234 269 73 27.0 4e-13 MVGVVIVALAVAAGIMLLPTKAVQKEAAAPVVSENKAQVSVARAAANLSPGSFLSARDIE WTAVAQSAAKDTFVQNESQDLSGALVLKPIKAGEVISPSALLARTDPEFVAAVLAPGMRA FTIEVDMVTGGAGLLRPGNRVDVILAAQTDPQKSRAFASQKNFDVARTLLHNLRVIAVDH TIEPKGFGADPQSSDPRMVRSSTPANINRKGTVTLEVTPKDVELLTVARSNGQLSLSLRN SQSGEAVQTGLPEKELTKLAEIIPSRSDKTPPAAVKVKTFYGASTEPPQQ >gi|319804496|gb|ADMF01000025.1| GENE 63 69811 - 70212 275 133 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVLVWASWSDLTKREIPNAAAVLLGLTAVVDAWIGGSPLQAGWLGCISILLVGFPVSAY LGLIGAGDIKLLAAAALWTSARTLDLLLITAWAGGVLALLYLCLNLVRTRRTTEIPYGVA VSLSLLLMLTHMV >gi|319804496|gb|ADMF01000025.1| GENE 64 70235 - 70429 277 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTFIERIRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLPT QGGK >gi|319804496|gb|ADMF01000025.1| GENE 65 70452 - 73070 1934 872 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLKFLSPIPATDSVVSGLTRLSIAVSAALFFSTIASSAAAEVFTVEAGKAGVLFGDDNRS EYDAYQKIKDGDDFSYSAIDLSQTSERKIYIRGKTVNLVSDGGQFIIGTDDAVITSYGGG TLNAGTESGTRGKLKAKSLEARHGGEAYLTNMDAALSDTLGANSELHLKNAVVTTKTTEV EGTLVLENSTLNTDYFLGGTPDEIKIIKSRINNPVKKQTIIDDDGKPFEAYDYRVTQIRE TNVAELTLTDSSAEFALSSWWLGSVALETSLAEQHGSFAHFHFTASNLDGTAIEGNGFGS NVNFKLADYTTLALSHLTYTANDRFKKGGNWPQYGTEADYADEALVKERITASVATLKTK PKAILYTSVPMRFQTVGSNQILVGSDATADGNAIVFGSSSLFLVDMEVAGSYWRIQGEEN EPFFSTLDGNPIKLSVADTSQLYIKGLTKDTQNLKVVDDHVKADKLWKVENIFTDNPLYG FKFDDDGKTIIAQIQTPKAIFGDAMMSAAMFEEAYRKPEADRADTERYLVEVLNALGNNK SFTTFTKEQIAEVGNKADMLLNPAGAAAVYSTAFDASDEVIQTVQRSMASVKDPESHAWA ALLGGKAKIDELPASVSRAGASSSTRGVTQRVKRDAYGVAVGFDTPVASGVRVGLAGGFS SGNTKNDSVGVKDEFDAWTLMAYARYGMGPFTLDGHAAATLLQSEVSNNYSRSKADMSTW VYNLGGRASVGVLLGETIVYPFVGAEFFHLKGEEYDAGPGIKARPGATSSTVMVPVGLNW EGNYKTWWGIASPVLGFSWARVFGDRTLDASSSALGETTNYTFTFADRTLMRIDLGLSLK GDNYDYSLYGTYVDGSQDRQAYKLSTSASYHF >gi|319804496|gb|ADMF01000025.1| GENE 66 73720 - 74676 619 318 aa, chain + ## HITS:1 COG:RSc0144 KEGG:ns NR:ns ## COG: RSc0144 COG0583 # Protein_GI_number: 17544863 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 22 302 25 303 321 104 27.0 2e-22 MEKIDSELLTILRSLVMTGSQTKTALSLSKSQSTISRTLSRARTLFHDPLFVHNGSMLVP TNRMLEIYGHLPKLLGEMEALFAKEIFHPESLNLHLRVAAIDYAAQYIILPAFHAMKRIA PRISIELQQLNADTFRRLSLGLVDMAMRLECTAPNELHSLELYEAKLLALVRKGHPAFDL LRHKGSLHFDDLLQWEFVQVNRTFTGLEWTTSLHPGALNHPAVMVPYSSLLAPTILETDW IALASARYALDAVKRWPVAILPIRLDCVKRMRTLYWHDRTHLDPAMQWVRSMIAAYGKPS SAEIAEYEIAIQDTGNGS >gi|319804496|gb|ADMF01000025.1| GENE 67 74838 - 76676 1864 612 aa, chain + ## HITS:1 COG:no KEGG:SEN3775 NR:ns ## KEGG: SEN3775 # Name: not_defined # Def: possible transferase # Organism: S.enterica_Enteritidis # Pathway: not_defined # 21 612 22 607 607 766 60.0 0 MIQRRTLVKAVIAALAPLSMTSAYAAGGPSGAHIGYQHQGQLGAVDMNPYKIAPLTAIIR DAGFTIQNIHVRIVPKANGQEIAYKVTNQKAKTYGGIPVFGLYPDYVNTVEVSYTKVAGD KREDIKESYWIYAPPVYFYATGARDQKNMDMNPEVKKVDPEFKDRLYFINNQILNSWKTG QFTWNNPQGGALEWGGGAQNAIIDTTGEVRWFMNTDPIHDQYSVLESGPMLGFEQNKDGA YTWGFGQRYLKYDIMGRKIWNRRLPQSYIDFSHALCAAENGNYFLRVAAAAYARPDGKTV RTVRDVIVEVDESGNVVDDWRLWEILDSYRDNVIKTMDQGAVCLNIDFSKEGQTLSAADL AAMDKSDRFGDIAGVGPGRNWAHVNSIDYDPTDDSIILSVRNQSAVVKIGRDHQVKWILA SPEGWRSPWKDKVLKPVNASGQMLKVEGSTCEGGFDWTWTQHSAFRVDEKSTKDVIYVSV FDNGDGRGMEQPALPNMKYSRAVVYKIDQKKMTVQQVWEFGQERGNDWYSPVTSLAKYQA DKDSVMVYSGSAGLFGKPSAMKPEELAKMTKGVHPYLMEFKWGEKEPAVEIKLNDAMGYQ AFPFNLQEAFEQ >gi|319804496|gb|ADMF01000025.1| GENE 68 77247 - 77942 600 231 aa, chain + ## HITS:1 COG:SMc04083 KEGG:ns NR:ns ## COG: SMc04083 COG0288 # Protein_GI_number: 15967071 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Sinorhizobium meliloti # 7 214 22 222 227 136 34.0 4e-32 MGSFHELIAGFHNFQESYLLKEKEFFDQLAHGQKPKSLVIACCDSRVDPAILLGGKPGDL FVVRSIAALIPPVGLSSPRDAVMSALEYGVKHLDVDHLIVMGHSACGGIHAALFPEKIEK EFFLSRWVQMAHPVSEELRRELTAEPTSEVLPDPSAPDFVRRVEEGAVLQSIENLLSYDW IEAKVQEGTLSLHALYYDLKSGTLYVWNAEKEDFEPSQEHHCPKEASLCHF >gi|319804496|gb|ADMF01000025.1| GENE 69 78326 - 79372 1189 348 aa, chain + ## HITS:1 COG:VC1172 KEGG:ns NR:ns ## COG: VC1172 COG0547 # Protein_GI_number: 15641185 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Vibrio cholerae # 7 326 27 342 353 296 53.0 4e-80 MTTFNFNTLCAGRSLTTEESQALFTQVFEGKIDPALLAGILTALKIKGETPEEIEGAARA MVAAAAHFPRPRGVEVGEIVGTGGDGMKTINVSTTTALLAAAAGLKIAKHGNRGVSSPTG ASDLLTALGVDIRLTPDESAQLLDTTGFCFCFAQLYHPAMRFAGPVRAALKTRTIFNILG PLTNPAHPDYALIGVYSPDLLETVAQTLRLLGVKRACVVHGSGLDEAAVHGTTELAELKE DGTIERSTLTPADLGAKRLYSIEEIKGGAPADNALITEAILAGKGTEAQQAFVAANLALL LKIGGLAKSLPEAVELARRTMASGKGLEVLNAHRAYAASHTASSQKAA >gi|319804496|gb|ADMF01000025.1| GENE 70 79405 - 81015 873 536 aa, chain + ## HITS:1 COG:VC1171_1 KEGG:ns NR:ns ## COG: VC1171_1 COG0134 # Protein_GI_number: 15641184 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Vibrio cholerae # 23 299 1 268 268 177 40.0 6e-44 MQFDLFRNAQATEAVAALNHASMASTVLEKIAASSVQRAAALPAVTRAEFDAAELERRQH FAAVGIDGNALVQRYGVFSAALRLPGRRVILEIKAASPSKGVMKTAIDLDDYAKVYGTYA DAISVLTEPEFFRGSFERLAAVRERTTRPLLAKDFIVSDRQLLAAYRCGADAVLLMLSVL APDGYRDLAAKAKALGLEVLTEASSVEEARMALELGAKIIGINNRNLRTLEVDVNRAPNV ASELTGDLPEDVVLVAESGYTSFTAIAKAVAAAPRLNAFLCGSALSQASNLSLAVRELLF GHSKVCGITRPEDAMAAAEAGSSTVGIILAARSKRCVVLSEAKRLAKAIRDNAQRFQLPV AICAVIDAAELSQIPTILQTFAPERIQIHGTLSAEALENLVHSHPNTAFVPVIGVSIQCR RADETDAHLLRAVRSLLDAGAANVLLDAANASGSGGTGTTFDHTVLEGLQTDPQVLAQIL LAGGLSPVNAAEAAFTDAAGFDFNSGVEEAPGIKSAEKIHSAFAALRGIPAPKPHH >gi|319804496|gb|ADMF01000025.1| GENE 71 81066 - 82301 1286 411 aa, chain + ## HITS:1 COG:HI1431 KEGG:ns NR:ns ## COG: HI1431 COG0133 # Protein_GI_number: 16273336 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Haemophilus influenzae # 3 389 6 392 397 583 72.0 1e-166 MKLNPYFGRFGGQFVPEILIPALDQLEEAFIAAKDDPTFQQELHTLLTDYAGRPTPLTKC RNLTQGTKTTIYLKREDLVHGGAHKTNQVLGQALLARRMGKTRIIAETGAGQHGVATAIA CALLGFKCRVYMGAKDVERQKPNVFRMELMGAEVVPVHNGRSTLKEACNAALRDWAGSFA DTHYMLGTAAGPHPFPTIVREFQKIIGEEARAQFAKLEGGLPDAVIACVGGGSNAIGLFT DFVPHKSVKLIGVEPAGRGLDTPDHGATLEKGTPGIFFGARSYNMQTPDGQIEESFSISA GLDFPSVGPEHAYLQEIGRAEYHGITDREALSAFIELSQREGIIPALESAHALAYALKLA RQNPEREQKFVVNLSGRGDKDIFQVSQRLEDEGLFVNGRLAADAAQAVLEG >gi|319804496|gb|ADMF01000025.1| GENE 72 82359 - 83186 384 275 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 6 259 3 251 263 152 34 9e-36 MTQSDRFAARFAVLAQKKEGAFVPFVNLCDPTPEISSQILEALAAGGADALELGIPFSDP CADGPVIEASAQRALAAGSTTAKCLGIIKAFRAKHPDIPVSLMLYVNLVTAPGVENFFAA AKDAGVDAVLIPDVPISMREAESEWDAAAKAHGIHLIAIAPPNGTPDLYKEVAQRSTGYV YLLSRAGITGTDKTAGRPGEAEIAALRAAGSAPLLLGFGVSRPEHVRAALEAGADGAIAG SAVAQVITENLSNIPVMLERLTAFVKEMKAATALS >gi|319804496|gb|ADMF01000025.1| GENE 73 83288 - 84811 1052 507 aa, chain - ## HITS:1 COG:FN0685 KEGG:ns NR:ns ## COG: FN0685 COG4145 # Protein_GI_number: 19704020 # Func_class: H Coenzyme transport and metabolism # Function: Na+/panthothenate symporter # Organism: Fusobacterium nucleatum # 37 501 32 482 484 315 39.0 2e-85 MTSRTILIFIPILLFFAALAVTAVWTERRRSREREKQRFADEYFLGSRSLSGVVLAMTLV ATYGSVSSFVSGPGIAWKLGLGWVVFAAPQIIAGFFILGLLGKKMALASRASGAITVTGL LEVRFGSRALTVLLSLALLICFCAMMTGQFIGGAAIFAEAAGIDPVLGLLLFGLLTVFYT TFGGFRAVAWTDFVCAVLMIVGMVMLGWAVIGEAGGLTAAMERAAAAQLADPSADLSSSP IFSPNANGALPWTLLFSAWILVGFGTAGLPQSAVRCMSYQSSADLHRAMIVSTIVCGALM IGITVIGVFARGLPDFDLAGASTDHVVPRLITQHLTPIEAGITLIGPLAATMSTVSSLLI AASSAVVKDLLLAARPELEHQPKVLLRISRWATLVLGLAAMAAAARPFDLIAWINMGSFG GLEVAFLFPLVLGLFWRRATAKGCVASISVGLMLYAGLLLFKPNLWGFHAIVPGLFVTAV VFALVSLLTKQHPNAKLRYFFPKPRGA >gi|319804496|gb|ADMF01000025.1| GENE 74 84808 - 85170 268 120 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSSNDVFPRKADPRGVPSTPTYDEALRICGREAAVTFIAALGLFAFFWGSIALFKDVHE RFWGLPLWFWVAVCGGYVLSVLVVMFIVKRYFKAMPLDMVPEERAFAGDHEDSSAEKAAQ >gi|319804496|gb|ADMF01000025.1| GENE 75 85400 - 86302 556 300 aa, chain - ## HITS:1 COG:RSc1369 KEGG:ns NR:ns ## COG: RSc1369 COG1573 # Protein_GI_number: 17546088 # Func_class: L Replication, recombination and repair # Function: Uracil-DNA glycosylase # Organism: Ralstonia solanacearum # 1 289 7 290 292 163 36.0 4e-40 MLDAMGLGPVWLLRDSMDPLVPTGALRPAGRTQSPSPKRSAVPARAELTAAKMGSLPQAP QSARAAQTSAASPTVPQAVAQPAVGMSTELLSKIASADWQALQTLSQHCTACALSAMGRQ HVVFSDGGPGPKLVVVGEAPGAEEDLQGIPFVGKSGKLLTAMLDSLGLVRRRDCVILNVL KCRPPRNRNPQPEEIVCCGHWLARQLELIKPDVLFLAGRFAISSLLKPADEMFSISKMRG RIHLAQLPDGRQVPAVATYHPSYLLRSPAAKSKAWEDLLLLKAAMKQAGLTLPVREKHWD >gi|319804496|gb|ADMF01000025.1| GENE 76 86347 - 86868 264 173 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|91774768|ref|YP_544524.1| SSU ribosomal protein S18P alanine acetyltransferase [Methylobacillus flagellatus KT] # 9 153 11 149 153 106 42 8e-22 MSGRSDLIVRAMRPDDVETLTLLEGRVEESPWSAGNFLDSLNTGHLCLVVQSASASASEA GLAAWAVASLVLDESELLIIGTAPSMQRQGIGRALLAELEAELARRGASSLYLEVRESNI PARRLYEQHGFVVVGRRRGYYRHLSGREDAVLMRRELPGASKAPAALIVEEAL >gi|319804496|gb|ADMF01000025.1| GENE 77 86910 - 87659 815 249 aa, chain - ## HITS:1 COG:RSc1367 KEGG:ns NR:ns ## COG: RSc1367 COG1214 # Protein_GI_number: 17546086 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Ralstonia solanacearum # 6 243 1 229 243 133 40.0 3e-31 MTDTLIPHILALDTAQEDCGAAILLADGSLFMHVEHVGSRHSERLLPMVRDLIHEAGIEK TDLGLIAFGEGPGSFTGLRVACGAAQGLAWALEVPVAQVSNLEALAEWLRETHLEAARPG TRIAVLNDARMHECYAGMWRVPAAAEDRLERLDGPVLVAPEDAQTYLERFKADMLCGSGS KVYSEAMKIRSDGGIRMVNAADSHPDAIARIARRMALSGGTIRPELAHPVYVRNRVALTM AERAAGERL >gi|319804496|gb|ADMF01000025.1| GENE 78 87878 - 88498 354 206 aa, chain + ## HITS:1 COG:no KEGG:RHA1_ro06009 NR:ns ## KEGG: RHA1_ro06009 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 13 183 6 175 212 72 30.0 1e-11 MTPSCETSSTRPRTRLSPQERRQAILAAARRCCVRNGAFDLSLADVAQEAGISRNLVYHY FKNHESLLEALLVAEGEILAARAAEIKPLTGEAPRETLRRLICAFLDFTAERADGFSLLH NAPDIKPLLRERFNASASLFSGRILDLLKLPDTPASHAAVEAATGFLLRFAYIERNALAH KRDAAADLCLAVIEAAANGVKKFEEV >gi|319804496|gb|ADMF01000025.1| GENE 79 88559 - 89029 190 156 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLHHHSCSALVLACCLAASGAASAWPDPANLGSKTAGSDGCEPASTPCLQLWSEMSAQER AKLWPYLDEASKTSYWRGLSNEERNELRSYMSARDQEALRRRFSLDARGDGGQVKHPKLC REDMRLMREQIMEVHMQHLGSADRRHGAKDLNAPGH >gi|319804496|gb|ADMF01000025.1| GENE 80 89521 - 90243 852 240 aa, chain + ## HITS:1 COG:RSc1648 KEGG:ns NR:ns ## COG: RSc1648 COG0745 # Protein_GI_number: 17546367 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 7 238 7 238 240 323 76.0 2e-88 MVERTPKILIVDDDPRLRDLLRRYLGENGFNVLVSENGEAMKRLWVREHFDVLILDLMMP GEDGLAILKRLRAEKDMTPVIMLTARGEDVDRILGLELGADDYLGKPFNPRELLARIHAV LRRRPRQDAPGAPSMENEVVKFGDFELDLGTRVLKKNGEIVPLTTGEFAVLKAFARHPRQ PLSRDKLMEMARGREYEAFDRSLDVQVSRLRKLLEPDPSKPRYLQTVWGLGYVFIPDGHA >gi|319804496|gb|ADMF01000025.1| GENE 81 90410 - 91978 1226 522 aa, chain + ## HITS:1 COG:RSc1647 KEGG:ns NR:ns ## COG: RSc1647 COG0642 # Protein_GI_number: 17546366 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 13 437 19 439 453 327 42.0 3e-89 MAWISQLKTRRPSLFWRTFLLLCGLLFFSVIGWLQSFRVLSELPYSQGVAQHIISTVNLT KYALVMADPLYRVDLLKTLAVREGVLISPRDPTDTITKMPSESFNGLIDQMVKSSLGPET ILATSVNGNPGLWVTFDIDGDQYWLQTKDDVLDPPYGTAWLWWAVAAGLASLFGATLLAR HVVQPLAKLSDFANQVSKGIKPEPLPEDASTSEIQAVNVSFNRMVEDLAHMEADRELLLA GVSHDLRTPITRLRLEIELASHLPEDSREAMVSDLEQMENIVNQFLAYARRSNEEQVMVN FSEAVQTAIHNARIDADPTMEVTTQLAPDVFVMAHPLELSRAVQNLIVNAQRYGRSDDGK LRLTMTVKKSADNQTAELDVADQGTGLPESQRARVMRPFERGESARSGVTGSGLGLAIVD RIVRRSGGTVVLGDALPHGLLVKVQFPLIQRSTLKKALKEQDKAALKLEKEEEKSQETLP QSSEQTNGQTPQETAQSAGSLSSSESITAQHEPSSSDKNQQS >gi|319804496|gb|ADMF01000025.1| GENE 82 92125 - 92418 273 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNRLTIKGQVTIPKAVRDFLGLQEGGSSVEFTINDDGSVTVRKACAAAEHTTAESVQTA SASPVRSRLQRPTRGFRASAPRAASHCGVLALLAGGI >gi|319804496|gb|ADMF01000025.1| GENE 83 93085 - 94617 1557 510 aa, chain + ## HITS:1 COG:Cgl0226 KEGG:ns NR:ns ## COG: Cgl0226 COG0471 # Protein_GI_number: 19551476 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Corynebacterium glutamicum # 52 501 70 517 527 313 42.0 4e-85 MPLQSSSVSIDAMSNQTKIWAFILGPILAVVVYYLMPDQFVNTSGQTVPFTHAGKACAAV TTLMAVWWFTEAIPIAVTAMIPIVLYPLLEVATPVNTMRHYASGTIFLFLGGFLIAAAIH RWHLDRRIALATISIFGTKPKQIIFGLMISTAFLSAWVSNSATAAMMVPIAIAVMGVIRS TQESPEITPDEKNFGVVVLLSIAYAASIGGMATLVGSPPNGIFARFVADRYHTEVSFLDW MQVALPVTLLLLPATFLLLNVLFPVKMDGIPGGREWIRNELRKLGPMSRGEKIVLCVFAG TALLWIFGPFLRGLEIGGATPLKPLTEEVIAMLAGVLLFIIPVDPKRGIHALDWNSAKDV VAWDVLLLFGGGLSMAAAIQSTGVAALIGAQAQVFEGIGELPMMFGVSTIVTFVSEVTSN TALAATMMPVIDAAAGSLHFNPEPILFATVFAASCAFMMPVGTPPNAIVFGTGRIRIGDM VKAGIWLNFIAVIIGVLVSYFFGRGIVPMT >gi|319804496|gb|ADMF01000025.1| GENE 84 94754 - 96187 1414 477 aa, chain - ## HITS:1 COG:RSc2211 KEGG:ns NR:ns ## COG: RSc2211 COG0513 # Protein_GI_number: 17546930 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Ralstonia solanacearum # 3 477 16 493 495 475 57.0 1e-133 MSSFDQFGLDPRILSAIERMGYTQPTPIQEKAIPVVLMGGDVMGAAQTGTGKTAGYGLPL IARILPKANTSMSPARHPVRALILAPTRELADQVSDNLVKYCADTPLRAGVVYGGVDIRP QADMLRRGVEILTATPGRLLDHVQQRSVNLSQVEIVVLDEADRMLDMGFLPDISRILQLL PQHRQSLLFSATFSPEIKKLAKSFLKDNPTVIEVARENSTAETVTQELFAVNDREKTDVL IDMLKTRGPEGTPLTQVLVFVNAKITCRRLARTLERVGINADAIHGDKTQEERQVALEGF KNGAIHVLVATDVAARGLDIKELPFVINYDVPYSAEDYVHRIGRTGRAGAKGVATMLATP EDKRLVEAIEALTKQTFKPISISPMPRTRRGSGAPYRRDDRSSYAERVDTPEDERLARER ARAYMPPAQRHRDPIFDMPYLENPRATSSAQKADAPVFLERQEKRRPVAALLGGRGR >gi|319804496|gb|ADMF01000025.1| GENE 85 96658 - 98997 2675 779 aa, chain - ## HITS:1 COG:YPO0643 KEGG:ns NR:ns ## COG: YPO0643 COG0568 # Protein_GI_number: 16120968 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Yersinia pestis # 181 777 3 610 612 361 37.0 3e-99 MNVAECTMAKTTKKTTEDTEAAAELTTADTKKVKSEPADTAEKKPARTKRVKKAEGDGAL DEAPAKPKRTRKSKAEKTAEGADGAESAAKPKKPRKTAASKSKKVKAAEEVPFDTDADDV DDEVDGELSSDAVLADDDDGMVDEEVAELDAWQPEGEDAENIDAADGSEDSDEDDQDADN RTPRNGYGELVRLGRSRGWVTLADINDYLPESALRTSENLQEVTEQLGRLGIQVFEAPPD EDDILINGMGGDNSDDIDEDDAAVMLTPEESVGLSKDPLRAYLRGVGSHKLLTRAGEIEV AKSIEQFTIKLVATIVEYPIAVEEILRLGEALKDENTAVDTVVDGFNDAAAEENANSSAD EIATDIGAAAMTVDQLAEMRARVLSLFELARKSLDRVRETYGDPKREKEYRKALADMSAA LSPIRFSVKLVTQMTDHISQHMDEVNNTLKKMRATLANQCRMPQVQVVELLKSDGVTDPE CFEKISAAGKPWSDAVSHSMAVLKEEQAVLISAEREGLLKLSEQRELGRAMKLAQTNLMQ AKAKMIEANLRLVISIAKGYVNRGLAMTDLIQEGNLGLMKAVDKFEYRRGYKFSTYATWW VRQSVTRAVADFGNTIRIPVHMTESYNKLRRQKQKFLQQHGRQPTEQELAELADLPLQKV NLLTQAMRGVESIDAPIGDEEDATKLDFVRGNERDDPGVAFQDRSMIDCIQKSLNELNPR EAQVLRLRYGIGTNQDHTLEEVGRTLGLTRERVRQIESAAIRKLRTPDFTERLRDYLQS >gi|319804496|gb|ADMF01000025.1| GENE 86 99691 - 102444 2726 917 aa, chain - ## HITS:1 COG:RSc2215 KEGG:ns NR:ns ## COG: RSc2215 COG0568 # Protein_GI_number: 17546934 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Ralstonia solanacearum # 262 913 79 753 755 613 57.0 1e-175 MAVAKKAKKDGVEVKIETSNDAQKDKKHSKRKIKTATLETSGLTLSIESVEPEKTSRKAV KAKKVKGEKTPKTAELQAVPEESPVAAAEPVKPTRLRKSAKKVVAKADADDLNTPSPAAD VKTKPVRKTRAAKKTEPSEETLPVAEASAAAEGKKAVRVRKVKTVKAQAPAEELSTEQAE AAPVKTPKSKAAKPKAAKSTAKSKGRKKSAKSVDADSEDFDFDDDGGEDIAGVIDDEDAD YEDIPELDEVEDIEAVEDVDEEADEDGAADAESAPSEAEPEAAPKKTRRSKKSRAARDKA LMEAMKHGYGAAEESTEDRRSKLIKLISLGKERGYVTYSEINDNIPNTLLDEDAIETIVN ILGNLNIAVHEVAPDEEQLLIQGGAEGVSDEDAEAEAEAALSTVESEFGRTTDPVRIYMR EMGSVELLSRQDEIEISKRIEDGLKHMVLAIARCPVTVHEILESAERIRSGETPIDEVVD GIVTPDDQKNVVGAVEDETDMGASAMTVGQLEDLKEKSLAVFDRVEAHFRSLVETFDGKG PHAPELEGLKDQIQRELMEIRFTAKTADRLCESLRRTIGIVRGSERTVYDEYVRHLHLPR EWFLANFISNATRIGWVDEVAAAYPDKAQVILHMRATVEEEQRRLAQLERESHMTVAELL DTYKQMATGESKARNAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNVGLMKAVDKF EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINRMNRITRQELQETGVEPD SRRLAELMEMPEDKILKIMKIAKEPISMETPIGDDDDSHLGDFLEDTQTVAPAEAVQNAS LSDTVKQVLDSLSPREAKVLRMRFGIEMQSDHTLEEVGKQFDVTRERIRQIETKALRKLR HPSRADKLKSFLDETDN >gi|319804496|gb|ADMF01000025.1| GENE 87 102615 - 102887 124 90 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNANTAHYGNVLQLETQKRLAYLAILGLSQRFVRGIFHPVWHYLILISPLCSGSASGPLI EKACQPRLNPKDIGSICLQAALFLLSFNAE >gi|319804496|gb|ADMF01000025.1| GENE 88 102945 - 105545 2106 866 aa, chain - ## HITS:1 COG:NMB1537 KEGG:ns NR:ns ## COG: NMB1537 COG0358 # Protein_GI_number: 15677389 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Neisseria meningitidis MC58 # 1 440 1 448 590 410 48.0 1e-114 MIPEGFISSLLERADIVDVIGRYVTLKKSGRNFMACCPFHKEKTPSFSVSPSKQIFKCFG CGKAGNAIGFLMDIEHLEFPEAVRRLADIYGMQVPEDNSPHRQEERARAKTLGEYMKEAA DFYSETLKATPRAIDYLKQREITGETALRFGLGFSPDGWHGLQAIFPGEKYLAKELLEVG LVLEKNGSRYDAFRGRIMFPIRSPKGLVIGFGARTMKGDEQPKYLNSPETPIYHKGSELY GLYEGRSAVIDRARAIVCEGYMDVIQLSQAGFREAVAALGTSITPEHIKKLFKLTDTVYF SFDGDSAGRKAARRALEAALPVIQDGQAARFVLLPPEHDPDSLIKAEGAEGYEREIEKAL PLTEFLKSLLVEGKSLTYAEERVKLTAEAKPLILSMKQAPVLRLALMREIARLARLQLED LEREWNTGAPERTVLPPMDISTDFGPAGQRWNSGPTAAGRFSRWGGAGSYGRGWQPRRQS YFEPRVRAKDVRERMLQCFLAYPALLSDFTPQIEDEFVTSESASSQYIVEVWRAAAHEDG SVTNTAALLACLEKSPNYDHYARLLAEEMTIETPQEAARLELKRGFLELELDQVKDRLLK LSEEPATADTLAKMKPLAKRSRDIEALISEAAEEEKDWRRRAEEQSRTAAFAQSEKGRAD VAYSNNPKVRALQEHLFGKAAMDEAAKTALSVREPTAAQTSVAAVAARNGAPATHPPRSA GKSENTHISSTQTSAVAARAARVFGSFGAPPPSGGALGVHPLNAGVSAPAAAVPVQSARS RRDEIAAALMAQAEKRTGRTLQTNDEFMSEESSPGPMPEPPKGLTDLPSDAELAGWSDDW SEAEEAQAEPQIPADMPPSGLGRKAR >gi|319804496|gb|ADMF01000025.1| GENE 89 105779 - 106228 238 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 4 147 3 146 147 96 34 8e-19 MVMIKERIREDMKAAMRAHDADRLSTIRLLLAAVKQREIDEKIEATDAQVTEVIAKMVKQ RRDSIQQYRAGGREDLAQKEQAEIDVLSGYLPKQLSDEEIGAIIDEAIAQSGLSGMAAMG KVMGAVKAKVAGRADLGKVSALVKARLTA >gi|319804496|gb|ADMF01000025.1| GENE 90 106292 - 106504 327 70 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|171058469|ref|YP_001790818.1| ribosomal protein S21 [Leptothrix cholodnii SP-6] # 1 70 1 70 70 130 92 4e-29 MPTIRVKENEPFEVALRRFKRTIEKSGLLTELRAREFYEKPTAERKRKKAAAVKRHYKRL RSMMLPKKLY >gi|319804496|gb|ADMF01000025.1| GENE 91 106704 - 108590 1050 628 aa, chain + ## HITS:1 COG:PM0724 KEGG:ns NR:ns ## COG: PM0724 COG0642 # Protein_GI_number: 15602589 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pasteurella multocida # 76 602 54 564 571 123 25.0 1e-27 MNGIALSPLTMIRLPFLLGFFLLLTGSAPFADAASSGQEQGDGGVVHIGIQETLDPEFFV DTLGPTMRHLRKRFPHLRFHAETFSIAELSQAIQTKSISFFIADSGLFTFLASTEHADDL ATRQNRFSSDPAKSTGAVLFVRADRNDLQTLSDLRGRKIAAQNPNDFTSWLTFQGELVRA GFDPKKFWGAELFTEYEYPNVLDSVSAGETDAGLLAACALEEQTALHGYRLEDFRVLHEQ TSNALRCRRSTALYPGPVFASLPHADPALTKQITLALLTEPPSENGSAWSISTDNSEALN LYKLLKTGPYSYLNDTNWSALWANYQEWIFAAFGLLMLLIIHTLRVDRLVERRTAELQAS IAERDALEKANQANAQMLAQMERAGIVAQLSSMVAHELRQPLMSIMNFVGGLSLYMRKTY PADPIVAQTADVIVEEAERASAIVDRVRGYDKTAHAQKIPIAAKDLIASAVRAFSHSALS SGVTVRTDCRTNACVLGDPLELTLVILNFLKNAADAMADASEKVIHLSAQQSGGDIVFRV RDYGPPLTNEVFETLSHPTVSHKPHGLGLGLSLAKSIAERHRGHIDFVRAQPNGLIAVLE LPCLLNTSPSEAGTTVLQDSGQRKTHHE >gi|319804496|gb|ADMF01000025.1| GENE 92 108583 - 109278 423 231 aa, chain + ## HITS:1 COG:mll0990 KEGG:ns NR:ns ## COG: mll0990 COG4566 # Protein_GI_number: 13471106 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 12 196 12 196 212 132 40.0 6e-31 MSNELLDPRLPPLVRIVDDDDRVRQSEAFVLRLEGFDVREYSSAEDFLHFDDVSRAGCIV LDIRMPGMNGLELQSELLRTGRSLPILFLTGHGDVAMAVDALKRGAADFIQKPVKAERLA ALTHELVAWHQQYTQRLTQRRHAIEKLKALTPKELEVCRLAASGLSNKAIAKELGIAEQT VRIHRWSAAKKLGGSSAVAFSRAIAAAESESDTDHPLFRHPNDSTFHKENS >gi|319804496|gb|ADMF01000025.1| GENE 93 109278 - 110705 907 475 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 16 472 23 477 484 238 34.0 2e-62 MRRFSRRMFGSLLLSTLAVPAVQAAQRVWDVIVVGAGGAGLSAAVSAAEAGAKVLLLEKM PHIGGNTRISGGFYACVDLVRQKRQGIEDSEQLFLSQMLESGGGHANPKLAAILVHNATP ALKWLEKLGMRFQPTVSEAYGSRWPRSHKPLMPNGEGYIRTLSTAAVKLGVIIKTSTPVT TLLTDNDGRVCGVQIAENNIRQNIFSKRGVIVASGGFGANPAMIARYAPQFSGLTTNNMP GSTGEMLLAAQKAGAELVDMEDVLCNPGLPPGRVMRARFHMLVDQFILVNQTGRRFIRED ASRAAVTRAILALPGKVAYTIIDSKGMKNLSILMQKEAVLAVESGDAWTADTIEDLARLM KLPAANLQATIDDYNTGMKTGQDPLGKVASRGDFSLDHPPYWACFAGMSIHYTMGGIRIN ELAQAMRADGRPVAGLWAAGEATGGIHGKERLGGNGINDAVVFGRIAGQQAARDL >gi|319804496|gb|ADMF01000025.1| GENE 94 110824 - 112314 1264 496 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 39 492 42 477 484 220 34.0 6e-57 MAFPLNRRQLLGAGLAAAIPSAHAFIPVKVPQKWDETVDVLCVGTGFSGLAAAIEAHNAG ASVLVIDKMALPGGNSILAAGGFAAPGNDMQKKAGIKDSPELLLADMLRAGGHLNHVECA KVVAYGAYDTYRWATDYLGVKWDRLGFQGGHSVARSCSFMNGTGADIIGPMLTKLSTLKV PVRLRTKLLNFVTDDNGAVIGVEVRANYQFPKEETGETKFIRVKRGVVLATGGFSQNVQM RTMHDPRLTAALDSTNSPAATGEGLQAAQRVGAGTCLMDWIQLGPWTSPDEKGFGVCPKF VEASVGYGLMIDPKTGKRFINETGNRKVRADAILAIGHPAIILISETNMKKHVPMSTVKA GLDNGSIKRFASLEELAQNYGIDPKLLKESVDRWNDAIAKKTDPDFKAKIFDDTEANEGT FFACRLWPRVHYCMGGLTINAKAEVIDTDFNILPGLFAAGEVCGGVHGMVRLGTVSIADC IVYGRVAGKAAANRKA >gi|319804496|gb|ADMF01000025.1| GENE 95 112659 - 112916 392 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLTRKLSAETPELSSVAAECRRTGEPVCVTENGRPAFVMMDMASFEAREARLSAREAALA MTSAKATQAAAANGTLLAMGVVAAG >gi|319804496|gb|ADMF01000025.1| GENE 96 113068 - 114132 672 354 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 2 317 518 840 860 263 43 4e-69 MIVLGIESSCDETGAALISDTKGLLADALHTQIDMHRAYGGVVPELASRDHIRRVIALTD EVLYKANLKRSDISAIAVTEGPGLAGALLAGNAVAHAMGFGLGIPVIGVHHLEGHLLAAR LADPAPQFPFLALLVSGGHTQILKVASFGSYELLGETLDDAAGEAFDKTAQLLDLPYPGG PAVSALAEKGTPGAIELARPMIHAPNLSMSFSGLKTSVLTAVRSAPDPKDEQFRADLARG FVDAVVDVLAAKLVRAIKMTRLNNVVVAGGVSANKQLRARLTQEVERRRGKIFFPPMRLC TDNGAMIAAAGIARMESMTEAERKALIEKISFGVRPRWPLEMLPKAALPERLTV >gi|319804496|gb|ADMF01000025.1| GENE 97 114297 - 114464 234 55 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|217969673|ref|YP_002354907.1| ribosomal protein L33 [Thauera sp. MZ1T] # 1 55 1 55 55 94 78 2e-18 MAKGVRDKIKLVSSAGTGHFYTTTKNRKTTSGKMEISKYDPVARKHVVYKETKLK >gi|319804496|gb|ADMF01000025.1| GENE 98 114481 - 114714 361 77 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|91789646|ref|YP_550598.1| 50S ribosomal protein L28 [Polaromonas sp. JS666] # 1 77 1 77 77 143 87 4e-33 MARVCQVTGKAPMVGHQVSHANNKTKRRFMPNLQYRRFWVESENRWVRLRLTNAGLRTVD KLGIDAVLADLRARGEI >gi|319804496|gb|ADMF01000025.1| GENE 99 115076 - 116095 413 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 282 1 275 632 163 34 4e-39 MQVLLAQPRGFCAGVTRAIAIVERALAIYGAPIYVRHEIVHNRTVVEGLRARGAIFVDQL SDVPEGATVVFSAHGVPKSVAREAEERGLRIFDATCPLVTKVHKEVGRMRREGRMILMIG HAGHPEVEGTMGQVEDGIRLIEKPADVANLSYTDQDALAYVTQTTISADDSRSVIEALKS RYPHIHEPKRQDICYATQNRQEAVKQLAQAGVDLVLVIGSATSSNSNRLREVAEREGVHA YLVDSAEHVDPKWFKGADKVGITAGASAPESLVQGVVEWLREHLGADNVRTMPGEEENVA FPLPKGLWESDLEAARDAGKTQERKEPFDESLSNKPSGS >gi|319804496|gb|ADMF01000025.1| GENE 100 116201 - 116692 635 163 aa, chain + ## HITS:1 COG:RSc2545 KEGG:ns NR:ns ## COG: RSc2545 COG2606 # Protein_GI_number: 17547264 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 162 1 162 163 223 65.0 2e-58 MSKEKHQSLTPATQWLKEHKIPFEERSYEYEEHGGTALAASACGIDHHHVIKTLIMEDEN AKPLVILMHGDCEVSTKNLARQIGAKHVSPCKPEQAQRNSGYFVGGTSPFGTKKHMPVYV ESSILELDKIFINGGRRGYQVGIDPKVLTDVLGAKPVNCANPD >gi|319804496|gb|ADMF01000025.1| GENE 101 116776 - 118251 1634 491 aa, chain - ## HITS:1 COG:RSc2453 KEGG:ns NR:ns ## COG: RSc2453 COG0144 # Protein_GI_number: 17547172 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Ralstonia solanacearum # 75 489 6 415 417 369 50.0 1e-102 MAENHPKRRAFEFQKKPRRQQEEPRRKRTERQIAADKRRQAERAAEGFKKHSGEKTPERR MAAANGRVRITGLIVDELSRALKVILKFDGPADVLMKLFFKSNPQLGMRDRGLIAEGIYD ALRRYGTLRAAMRPVHPDRAPRLAALTVLARQHGIDALSPSSIGSEEGPLKNVLAFDVSK APAHVQAELPQWLFDLIEAQYPDSQALYAAMKEGAPLDLRVNLLKATREEVLAELAKNGV EAYPTPLSPDGVRLPTKPGLTRWPIYQDGLVDVQDEGSQLIARLLTPRRREMICDFCAGA GGKTLALGALMRSTGSLYAFDVNEKRLAGLAPRMRRAGLSNVHPVAIKSEADPRVRRLAN KFDRVLVDAPCTGSGTLRRNPDLKWRLSPEELDRINDIQKRVLESASRLVKKGGRLVYAT CSLLKRENQDVVEAFLAEHPGWRLVPVKEVFEQQGIHFEPGQLERFEGYMQLLPHVNNTD GFFAAVLQRDE >gi|319804496|gb|ADMF01000025.1| GENE 102 118317 - 118973 636 218 aa, chain - ## HITS:1 COG:RSc2454 KEGG:ns NR:ns ## COG: RSc2454 COG0299 # Protein_GI_number: 17547173 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Ralstonia solanacearum # 1 209 1 205 216 213 53.0 2e-55 MKNIVVLISGRGSNFEAILRTARSEDWEGRFGLKIAAVISNRPLAKGLDTARREGIDAVA VDHKAYPTREAFEEALAAAIEPYKPAVIVLAGFMRILTESFVARWEGKILNIHPALLPLF PGLDTHQRAIDAGCRVHGSTVHFVSSVLDGGAIIGQSVVPVLPSDTDETLAARLLPYEHK LYPQCVKAVALGEVKLIDGKAVMSDEVAHHLAIFWRKD >gi|319804496|gb|ADMF01000025.1| GENE 103 119270 - 120268 354 332 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 17 322 8 309 317 140 32 3e-32 MDFTSSPRSNSSHIAMHVFRGLPSPLQRIPSAVAIGNFDGVHTGHQALLAGLVDAARERG LVPSVLTFEPHPREFFPHLDPVPRISTLCDKVKRLLDCGIERIYMMPFNEHIAREGAEAF VTNVLVNGLDARWVTVGEDFRFGSGRAAGAHDLERLGKEHHFETWISPLLFHGTAKVSST RLRAALSEGDFYEAEMMLGHPYTMSGRVIHGQALGRTLGYPTLNIAPIPPGSRARPALAG VFAVKVSGLGPAEQCGVASLGLRPTVSSARRWLLETHVFDWKGDAYGRPVTVRFIERIRG EKKFSGLEELQAAIAADARRARQILGLAPNGE >gi|319804496|gb|ADMF01000025.1| GENE 104 120442 - 123312 3285 956 aa, chain + ## HITS:1 COG:RSc2458 KEGG:ns NR:ns ## COG: RSc2458 COG0060 # Protein_GI_number: 17547177 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 953 1 957 960 1148 58.0 0 MAKAEKASQDAQKKYPLNLPDTPFPMRGNLPKREPGWVREWDEKKIVYRILDKRRDAKKF ILHDGPPYANGAIHIGHAVNKILKDMIVKEKTLEGYQAPYVPGWDCHGMPIEVQIEKLHG KNLPVEKMQSLARAYAMEQSNLQLADFKRLGVLGLWDNPYRTMRHDTEAAEITALRKIME KGYVYRGLKPVNWCFDCQSALAEAEVEYMDRKSPMLDVAFALTDEDHQRVEDIFGHKIEK PCSVVIWTTTPWTIPANQALNMHPDLTYALVDVGDRYLILGEGLVEEALKRYGLTGSVVA TAKGALFEGVRFKHPLYDMHEGYRRYSPVYLADYVEATSGTGIVHSAPAYGVDDFVSCKK HGMSNDEVLNPVQGDGTYASWLPFFAGMNIWQANPKILDTLRVAGALLSSGEMTHSYMHC WRHKTPLIYRATAQWFVRMDAPDEDTKSVLGLPAAEKTLRQAALEGVKATKFFPEWGINR LYSMIENRPDWCISRQRNWGVPLPFFLHKETGHLHPDTFEIMKKVEALVAEGGIEAWTKA TPEELIGEDAKNYVKSTDILDVWFDSGTTHYTVMRGSHKDILGWPADLYLEGSDQHRGWF HSSLLTGTMLDGRPPYNQLLTHGFCVDEKGEKMSKSKGNVVRPQEINDKYGAEILRLWVA STDYSGELRLGPTIINRVVESYRRIRNTLRFLLANTSDFSMEKDAVPVEDMLELDRWAVA YAADFQKRVLVEYGSYRFHNVVTLLQTFASTDLGSFYLDVLKDRLYTTGAQSFARRSAQT ALYLITAMLLRLIAPILSFTAEEAFKLFSPNADETIFTETFLKLPEVKDADALLAKWAQI RAVRADVQKAIEDERTSGTIGSSLQTTGEICAASPLYEVLASLGDELRFVMIMSEVKLTK AVDGAETTVSVKPSTEKKCERCWHYVPGVGSNAEHPTLCPRCVSNLFGAGEKRLFA >gi|319804496|gb|ADMF01000025.1| GENE 105 123313 - 123864 501 183 aa, chain + ## HITS:1 COG:RSc2459 KEGG:ns NR:ns ## COG: RSc2459 COG0597 # Protein_GI_number: 17547178 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Ralstonia solanacearum # 6 175 5 168 173 153 49.0 2e-37 MAKSVSSAKTARSTARSGGRTGASPARFSLWIAFGFLILILDQATKFWFERHLDPGDFVP VIDGFFNLTLAHNYGAAFSFLASMGGWQRWLFSAIALAVIVVALRLLWKHSRQTLFALSL TLILSGALGNLIDRSLWGYVIDFLDFYLGTWHWPAFNIADTAICLGAAGIIIDELIGVSK ERS >gi|319804496|gb|ADMF01000025.1| GENE 106 124063 - 124896 264 277 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260888440|ref|ZP_05899703.1| ## NR: gi|260888440|ref|ZP_05899703.1| putative glycosyl transferase, group 1 [Selenomonas sputigena ATCC 35185] # 2 260 26 289 391 124 30.0 7e-27 MANAFVERGHDVKIVFLQNAAGEPAYPLDLSVELENCAKNPVPWRRRKKVLRIRSWFIRD KNRRKAFRSHRMDQARACQISPAILNFRPDIIIAFQPESACCITQYFMDRPPIITMMHAS SAAFLKHPQTAFLAESDLTVVLLPEYVEQVRQLYGVTHAISIPNAIEEQPPSLYESIKKE KTIICAARISRSEKRQHLLIEAFAKLQSKFPDWKVEFWGDTSIDADYISELKGLIHRLGL ERQIRICGQTNTVSAVIARAWDFCASFSQRRIPAGTL >gi|319804496|gb|ADMF01000025.1| GENE 107 124958 - 125170 68 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRDHENGLLAEDSADSFALSLETLMQDEALRQQLGRQGIEDMKAYAPEKIWNQWESVLDS VIGQHESHQP >gi|319804496|gb|ADMF01000025.1| GENE 108 125274 - 126515 1115 413 aa, chain + ## HITS:1 COG:VC0215 KEGG:ns NR:ns ## COG: VC0215 COG0452 # Protein_GI_number: 15640245 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Vibrio cholerae # 2 389 4 390 399 319 48.0 6e-87 MLQDKRITLIVSGGIAAYKSCETARALMRAGAHVRVVMTEHATKFVTPLTFEALTGSPVL TTEWQPGPKGPMPHIDVNRESDLLLVMPATANLIAKAARGIADDLASTLICARRTPIAFV PAMNAAMWRNPATRRNIEFLRREGALIFGPAEGLQACGDTGAGRMLEPAEVVDMMEMVFS PKHLAGKCVLITAGPTYEAIDPVRGITNRSSGLQGFSIARAARDFGAEVTLIAGPTHLTE PVGVKRIDVVSAREMDEAVQIELDRQRFDLFVSVAAVADWRPGAVSEKKIKKDPTGGILL SDLNWVENPDILARVGERPDKPLTIGFAAETAEGASLTAFAREKCFRKHAAFIVANDARQ ALESKANCIQLVSLTSAIPFGPADKFACAQFILTEAAKQLSGNAGGTAAPSEK >gi|319804496|gb|ADMF01000025.1| GENE 109 126533 - 126979 540 148 aa, chain + ## HITS:1 COG:RSc2463 KEGG:ns NR:ns ## COG: RSc2463 COG0756 # Protein_GI_number: 17547182 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Ralstonia solanacearum # 1 146 1 146 148 196 65.0 9e-51 MNIELKILDPRVSENLPKIATPGSAGADLRALLDTPLVLAPGETKLVHTGIAIHIGNLHY AAVILPRSGLGHKKGIVLGNLVGLIDSDYQGEIMVSLWNRSGTPCTIEPMERIAQLVVIP VVQPEFTVVDAFADSKRGTGGFGSSGTK >gi|319804496|gb|ADMF01000025.1| GENE 110 127108 - 127755 740 215 aa, chain - ## HITS:1 COG:Cj0264c KEGG:ns NR:ns ## COG: Cj0264c COG0243 # Protein_GI_number: 15791635 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 3 211 630 835 838 184 44.0 1e-46 MLFDVREKDRKFVAFEDFRKDPKAHSLDTESGLIQLYSPKIAGYKYADCLGHPSYFVPSE GVNTKTQDTPLALMACKSRYRMHSQLDGTTSHHFANIEDREPCWINPADAKTRGIESGDV VLVRNKRGALLAGAYVTDRVMPGVVVVHHGAWFAPMDINGRRIDVHGNSNTLTMDVPTSS LACGNIASTALVEVEKWKGELPRVYVYDQPERVLV >gi|319804496|gb|ADMF01000025.1| GENE 111 127800 - 129044 496 414 aa, chain - ## HITS:1 COG:ydcM KEGG:ns NR:ns ## COG: ydcM COG0675 # Protein_GI_number: 16129391 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 394 1 392 402 333 46.0 3e-91 MIRHKSFVFKLKPDGATRRSLAKACGCVRFVYNKALDWNKEQQTFQVSYPKLCALLPEWK REFPWLGECHSQVLQQGMKDLMTAMVNFFEGRAKFPRFHKKFKDEDSIRFPQGFKVDEAR RQIYLPKIGWVGYRRSRFINGKLRSVTVMRKADGWYVSILTEREIEAPVHPKAGREIGLD AGVKKTAALSNGKIYLPVDAFRSSKDKLAKMQRRLKRMVPHSENWKKQQQKIAVLHKEIA DTRRDHLQKLANDICKNHAVVYREDLKIKNMTASAKGTLEEPGKNVRQKSGLNAAILDQG WGILFGLLDQKMKELGGEVFAVPPANTSRTCPKCEDVSPLNRLTQARFCCRKCGFEGNAD VVAANNILRRGQRLRACGELQSTAAVQVNRPSRKRRAGQQQEPIRRDPQAPENA >gi|319804496|gb|ADMF01000025.1| GENE 112 129055 - 129258 107 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIALSVEFPQTGPEIAAHLLGGRSYGHQVLIREDGAAVFRHKDQMNIECENTVSSTSQIR CHDADQK >gi|319804496|gb|ADMF01000025.1| GENE 113 129073 - 129480 105 135 aa, chain + ## HITS:1 COG:ECs5182 KEGG:ns NR:ns ## COG: ECs5182 COG1943 # Protein_GI_number: 15834436 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 4 134 11 142 143 164 56.0 5e-41 MTPDLRRGRHCIFALNVHLIFVTKYRRSIFTDEHLMTIRASAEKVCGDFRASLREFNGEC NHVHLLVSYPPKVSISSLVNSLKGVTSRILRNKFPELETSCCKGKLWSPSYFAASCGGAP LEKLKAYIESQNRPD >gi|319804496|gb|ADMF01000025.1| GENE 114 129535 - 130731 1312 398 aa, chain - ## HITS:1 COG:HI0643 KEGG:ns NR:ns ## COG: HI0643 COG0243 # Protein_GI_number: 16272586 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Haemophilus influenzae # 2 398 214 609 825 373 46.0 1e-103 MVLNHSERVILWGADPLVTNDIDWLTTLHNGAGYFRALKAKGTKTISINPIATDTAEYLG SEWIAPRPGTDCAMMLGMIHELVRTKKTDEAFLAKCTYGWPELRDYVMGKTDGIEKTPAW AAQECGVPAEKIVELVHDMQSHRTMIMMGWGIQRIQYGEQSHWMGFALAAALGQIGLPGG GIGTNYAYSNGGTPMAYGPFLGGISSSVKSAKVSTLPWKGSKVIPVARFADCFVNPGKVI DFNGTKVTYPEVRLVMWAGGNPFAHQPDTMNLERAWKKPETVIVTDTVWTATARHADIVL PAATAFEHADITNIGTYSNDGIVAMQQAIEPQWESKSDYWIFSQLAERLGCREAFTEGLD EMGWIRRLYGDAQKMGERIGVKLPNFEDFWKTGYQNEP >gi|319804496|gb|ADMF01000025.1| GENE 115 130862 - 131485 636 207 aa, chain - ## HITS:1 COG:PM1793 KEGG:ns NR:ns ## COG: PM1793 COG0243 # Protein_GI_number: 15603658 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Pasteurella multocida # 75 207 29 161 823 114 40.0 2e-25 MNRLNIALTRRGLLAAGAAGTAAAAGISSAASAQTASSATASNARKGFDAAAKNSAKFAP EPLPIQDAQGLKLTHTFSLGESTLAEYGFITAARWGVVRGHVKGGKIMDLTPFEHDYAPS INLDGLRELPYTPSRIRYPMVREGFLKNGPASRDKRGEEKFVRVSWDTAFDLVAKEMNRV YDNYGPSAVFGRSYGWMSTGKVNAAIN >gi|319804496|gb|ADMF01000025.1| GENE 116 131689 - 132258 653 189 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQPRDLEDVEVDEDMELDDELCRDIQMKLPDCLWQLDYVGRYAAGKFNEDFASLDSGERF LFGVIEVPFTEEAGSFTWGVWAEVAPADHDAYLLSFQSEMAEGRVMAGRIANDIPGSPDA AGARVELVLHADRRPEIRVLEGSLAKLQARGMSLAEHEALDKVLFPEDDIEEETGEEWPE EGTLRPTLQ >gi|319804496|gb|ADMF01000025.1| GENE 117 132378 - 133331 384 317 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163794676|ref|ZP_02188646.1| 50S ribosomal protein L13 [alpha proteobacterium BAL199] # 10 311 7 309 312 152 27 9e-36 MQLFLHHVALCAPLFLLVALGWGSVKIGLFTSEVTKALGRFTFRLLMPVMLFKLMSGFAD MPPVDWRILIAFFASCTIIYAMGRSFFKHVFKTDAAATTVLAMAGIFGNNVQLGVPIVQV SLGNDAIPAISLIIIFNVLLLWTVAIASVEFGRTGSVGNWRSAAAPMLRVFKNPIVLGIL IGSAWSFTGIKLPDFLEKSIELVAMSTTPMCLMVVGMGLAQHSFRAALTKGSVITAVKLV LQPLLVWIIAKILGLGTLETNAVVLMASLPVAINIYLMAQDFKAEEGAASNSIFVSTFLS ALTVPLTLTLLGAAPQF >gi|319804496|gb|ADMF01000025.1| GENE 118 133446 - 134027 783 193 aa, chain - ## HITS:1 COG:YPO2386 KEGG:ns NR:ns ## COG: YPO2386 COG0605 # Protein_GI_number: 16122609 # Func_class: P Inorganic ion transport and metabolism # Function: Superoxide dismutase # Organism: Yersinia pestis # 4 193 3 191 192 250 64.0 1e-66 MTEFQLPKLDFAPDALAPAMSAETIEYHYGKHHASYVANLNALLKGSAFEGKPLEEIIRG AEGGLFNNAAQHFNHSFFWKCLTPNGGGRPEGALLAAIEKTWGSFDAFVAAFSKSAAGNF GSGWTWLVKKADGTLAIVNTSNAGTPVKQGDKPLLTLDVWEHAYYIDFRNARPKFIETFF TKLVNWKFAESQF >gi|319804496|gb|ADMF01000025.1| GENE 119 134185 - 136125 1110 646 aa, chain - ## HITS:1 COG:NMB1363 KEGG:ns NR:ns ## COG: NMB1363 COG1570 # Protein_GI_number: 15677228 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Neisseria meningitidis MC58 # 139 644 10 445 451 227 34.0 7e-59 MTAKHSGSAGGPPPDFFDDPAFTASLYAEADRRAGGADRSARSSRESQVGRSKAPKASVQ NFSTAQPSKRVPAFAKPNPPYSGMPPVSWSDADSELKPRIEPIAKRFSTRAAWGPQTAAS AASGVVLSPAAAPRREEPLSVSAALRRMTNALEGVLDGIWITGEVAEVSLSSLGHLYFSL KDEVALLSCAMFRSALGRGPIFQKGDRIELLGRVDIYAPRGRLQMVGTRWRPAGVGSLYE AFLKLKAKLEAEGLFAPERKKPIPRFVRRVALVTSAQAAAYGDVLRTLERRTPWVKIMHV DSLVQGADAPASLISALIAAQALTPDVILLVRGGGSYEDLQAFNDEELARTIAALSVPVI CGVGHEADFTIADFAADLRASTPTAAAESIGPDRDAWLRRLDKCADMLERAAERAYQHAA QRFDSAAAHLPAEDRLLQPWEQAMINARVRLCNAAQGRLADAERAAEGAGLRWRTAADFI TPRQIRLERAARFLAEPDLCLRAPVQHLTAAAERFRRLGLAAEERRGTEVERQTKALSFF AHHALEAAAARLDRALRLRPDPMREINAAQRRVELAANALSLADPNRPLRAGYARIVTDA DLVVSHAAELRRGSAVRILFADGFAAAEVQEITMNTESSETGEQMP >gi|319804496|gb|ADMF01000025.1| GENE 120 137077 - 138147 923 356 aa, chain + ## HITS:1 COG:RSc2530 KEGG:ns NR:ns ## COG: RSc2530 COG1663 # Protein_GI_number: 17547249 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Ralstonia solanacearum # 6 343 7 341 349 212 44.0 1e-54 MSSHPRIEAWLHRVWSHRGPTACLLYPLSLIYGAISASKRKSTKPQHLPVPVVVVGNIYV GGTGKTPVTIALVRELRARGWTPGVISRGFGRQADEVKIVSPESDAREVGDEPLLIARDS MAPVAVGRARYQAGLALLHAHPGVNIILSDDGLQHTALARDVELAVIGAGGLGNGWLLPA GPLREPVSRLDKVDALILNTTTDVEVESRTPRFAVSSCFGACRRLSNGDIRDIDEISHDL KASQGKALAAAGIASPGRFFAMVRAHDIDCAELELGDHYDFAKNPFAGRKESIILITAKD AVKCARIPEIKNDDRIWVIGLEVVLDAYLVDIVDQKAAAAAQRMGRHPETRNDKIE >gi|319804496|gb|ADMF01000025.1| GENE 121 138210 - 138485 299 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSFIPEFLVCPNCRGRLFASVPEEQANDAEGDKELICPHCGLAFAVKDHIPMMVPHDAR KLSEAETLSWQSKARALSGQGPNAEAAGDLS >gi|319804496|gb|ADMF01000025.1| GENE 122 138482 - 139243 728 253 aa, chain + ## HITS:1 COG:PA2979 KEGG:ns NR:ns ## COG: PA2979 COG1212 # Protein_GI_number: 15598175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Pseudomonas aeruginosa # 2 251 4 253 254 262 57.0 4e-70 MSFTVIIPARMKSTRLPEKPLKDICGKPMIVRVAEAASRTGASRIAVATDHEAIYEACRT AGIECVMTRADHPTGTDRLAEAASLLGLAADEIVVNIQGDEPLMPAEAVNQTAALLADRP ECAVATAAHTLTSIEDFFSPNVVKVELDSRGNALTFSRAPIPWPRDAFRKDQPQLPEGFR PLHHLGLYAYRVGFLKKFPTLAPAPIEEAESLEQLRALWNGEKIAVLVLHQALPAGVDTE EDLERVRAVFASR >gi|319804496|gb|ADMF01000025.1| GENE 123 139313 - 140443 774 376 aa, chain - ## HITS:1 COG:XF1739 KEGG:ns NR:ns ## COG: XF1739 COG2220 # Protein_GI_number: 15838340 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Xylella fastidiosa 9a5c # 39 373 32 368 385 275 42.0 1e-73 MSAAHNSVRRRLLLGGATVAGLTAAGAAAGSAVMARADFGALPTGERLKRIQASPHWQDG SFHNLVPMELSASGRSRLEIMRDFLLDRNPQRFPSAPVPHIKTHFAAVPDNHMVWLGHSG FFIHWAGLKVLIDPALHQAFPVPGFYKPFPGTDCWEPADLPAADLLLITHDHYDHLDYRT VLDLKNRVRRVVCPLGVGAHFEAWGWEAERITELDWQESAKVGGLTVSAVPAQHFSGRSF TPNPTLWCGYMLEADGMRIYHSGDTSFGPHFAQIAQTFPKIDLALIEDGQYDADWPGVHL MPDAWRQAAAQLNPQAIVAIHNSKFCLSHHKWTDPMNTAKQSAKVLGIALATPLIGEPMP LDPARRRSFDDWWLKV >gi|319804496|gb|ADMF01000025.1| GENE 124 140502 - 140693 60 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHRGFFLKILPNFRKFIFARLDGFICALGVLPNRRLFPKRPKQVIIVGSGVAAACRSSRF SHI >gi|319804496|gb|ADMF01000025.1| GENE 125 140718 - 140840 58 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQALSSSAELKSPLAAALCTAMSGICSSSLSKLPQRWWRV >gi|319804496|gb|ADMF01000025.1| GENE 126 140997 - 142601 1918 534 aa, chain + ## HITS:1 COG:RSc1380 KEGG:ns NR:ns ## COG: RSc1380 COG0747 # Protein_GI_number: 17546099 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Ralstonia solanacearum # 21 527 10 510 517 446 46.0 1e-125 MTNAAFLTLSHCEHLLKYTKRAAALTAAAASAALILAASPAAQAKHITVALSAAFTTLDS YDSPDTITKAVARAVYEGLFTFDKDMNPVPLLAEGYERSADGLTYTVRLKKGVQFHDGTE FDAEAVKLNFDRVLRPNSGLTRRAIYTFIDTVKVVDKYTVQFTLKYPHGGFIRRLAMNNT MMVCPSLIKAAGGNKTGLALKSCGTGPYIQEEFNPSEKFVVKKNPNYRIKGLPKLDGITF IPVPENSTRAAMIRTGEADFITTVPLEQIKSLEADETLNVTAIPSIMQKHLDLNNFFKPF SDKRVRQAINYAINKDALVKVAYNGYAVPQYGILASQYPGAVKLGPWPYNPQKARELLKE AGYPNGFSTILWSGYNDTTSGKVVQFLQQQLAQVGIKVETKLLEPGVRTELILHVKGAAD SKSRLFYIGWSDGSFDPDQVLRPILHSTQQPPVYMNTTYYANKHFDELIDKALVEPNEAK RNQLYEDAQKTAWEDAPWAFLLFEMSTGASNKHLKNFNMMVDQSFEFYNAEWVE >gi|319804496|gb|ADMF01000025.1| GENE 127 142705 - 142845 96 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSALATLLIAALSKDHTDAVDVLERRSAFLEAFLLFAVLPGLLPAL >gi|319804496|gb|ADMF01000025.1| GENE 128 143026 - 143679 952 217 aa, chain + ## HITS:1 COG:RSc2533 KEGG:ns NR:ns ## COG: RSc2533 COG0563 # Protein_GI_number: 17547252 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Ralstonia solanacearum # 1 217 1 221 222 309 71.0 3e-84 MRLILIGPPGAGKGTQAKFICERFGIPQISTGDMLRAAVKAGTPLGLAAKAVMEKGQLVS DDIIIGLVKERLAQPDCANGALFDGFPRTIPQARALIDAGIPIDYVLEISVPDAEIVERM SGRRVHPASGRTYHIKYNPPKVAGKDDVTGEDLVQREDDHEDVVLKRLKVYHDQTEALVD FYSKLAQSGSEHAPKYRSISGLGAIDAITARVFDALK >gi|319804496|gb|ADMF01000025.1| GENE 129 143862 - 145373 1381 503 aa, chain + ## HITS:1 COG:BMEI1527 KEGG:ns NR:ns ## COG: BMEI1527 COG0277 # Protein_GI_number: 17987810 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Brucella melitensis # 28 488 13 470 470 350 43.0 4e-96 MTECVDCAFCAPLTDAERDQIFQALLEIVGPRGLVTAPDEIAAASLDSRRRRQGSALALV RAASTEEVSAVVRLAGEWGLCIVPQCGNTSTVGGATPEPESPANRRTIILSLSRMNRILS VDPVNAAMTVEAGVILAKAAEAAREAGYLYPISLAAEGTAEIGGTLAANAGGVHVVRYGM ARRSCLGIEVVLADGRVVSLMRSVRKDNTGYDLRDLFIGSEGTLGIITKAVLDLSALPAG RLTVWAPLGSLEAVEKLFQTVEKFAGPALTAFELMSEASLDFVYAEGRTSPTTAKSDWTV LFDLALTGRDDPDNMTEGLIEALEPLFDSGDVLDAVLAKNEDEAQALWQLREEIPTAVRS SGGNIKNDISVPRGSLCRFIRETFAEFEEKTPWLAPAVFGHYGDGNLHFNLGNRPELGKG FWKQHEREVHRMVNDAVIRFGGSVAAEHGVGAKAALLERTKDPVELELMKTIRAALDPKG ILNPGRVVRWPDNVWRNPAEAWD >gi|319804496|gb|ADMF01000025.1| GENE 130 145518 - 146753 973 411 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302860473|gb|EFL83550.1| ## NR: gi|302860473|gb|EFL83550.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47] # 15 391 6 350 350 104 25.0 1e-20 MHQFKLQRSTIAVGLACAAVLTLSGCAATSITGSTAVPAAEASAKKMKAEPVKISMPVVD AFRGSGIFFFDDNVRSRLYISDTIAVNGRLPLKEEAPRGVAKGFTWGAGAATILRNGEPQ PLTSPQALSVEKSGNVRLHYPPLKAKNAKPMSLSIKLIAYDLSGLPIGPYLKTRAGKSTP AGWLIANRYVFPEGSVGYRTVASVDETEVLVPTQKAFTGSAQIEDFSQRFAKDIPYCLRF IPNRDAEPLGLRFPKAIVKQTKTVKLTRGRTRTEEVAQAGEAMLYPVKKNTLFCAAEGSQ TAAAQWNLQYVNGTRVISFTFPDEVSPANYGFLKTHRDALRLAFAEERVKQRGKTTTQVR PAALWLAGKPVLDEQWRFNAVAADAVSDAIRLTADQRAAWEAEQKAQSRAK >gi|319804496|gb|ADMF01000025.1| GENE 131 146833 - 147876 220 347 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] # 24 325 41 334 353 89 26 1e-16 MNDNATPSLTPNTPSEASPWLFCVAPMLDWTDRPCRFFERLLTRRGRLYTEMVTTGAIRF GSRDALLGNSRVAGPTALQLGGSDPKELAFAVEAAAPYGYDEFNLNCGCPSPRVQKGSFG ACLMLDAKLVAECVRAMRDATDKPVTVKHRIGVDERSDYGFVRDFVGEVYDAGCRTFIVH ARAAWLQGLSPKENREVPPLMRSRAWELKRDFPDAVIVLNGAVKTTAECRALLDEVHDGV RIDGVMVGRAAYQTPWMLSEVDSVLYGESCRTLTREAVIAAVEAEVEQYYAADEHVIRAF ARHLNGLCQGLSGARVWRRTLADPKIIKAEGPNLYRRAWREAFGTDF >gi|319804496|gb|ADMF01000025.1| GENE 132 148041 - 148493 191 150 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90021194|ref|YP_527021.1| ribosomal protein L20 [Saccharophagus degradans 2-40] # 19 147 1 133 134 78 39 2e-13 MLLVPKAKNLPKAKSSLSVGLCPCGSGRRFADCCGVYLSGGSQALGAPTPEALMRSRYSA YACGDDAYVLATWAPETRPSRLFEPGEARPKWMKLKVLGHSTAADGQSGEVHFRAVARTA NGALKMEEHSHFRRDEEGHWLYVSGEVLGT >gi|319804496|gb|ADMF01000025.1| GENE 133 148459 - 150303 2349 614 aa, chain - ## HITS:1 COG:RSc1296 KEGG:ns NR:ns ## COG: RSc1296 COG1217 # Protein_GI_number: 17546015 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Ralstonia solanacearum # 3 610 2 605 606 916 73.0 0 MTRAIRNIAIIAHVDHGKTTMVDRLLQCAGTFRANQQVEERVMDSNAIERERGITILAKN CAVEYEGVHINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQG LKPIVVVNKIDRPGARPDWVLNQTFDLFDKLGATEDQLDFPVIYASALNGYAGTTDNVEE LKKIGNMRAIFDAVIKYVPVRDDNPDGPLMLQICSLDYSTYVGKIGVGRVHRGRIYPNSE VAIMDGPDGTPRRAKINQILEFEGLERKEVNEAQAGDIILVTGIEELNIGTTITDKDHPE ALPMLTVDEPTLTMNFQVNTSPLAGREGKFVTSRQIRERLERELKSNVAMRMRPTADETV WEIAGRGELHLTILLENMRREGYELAVSRPRVVIKEVDGVKMEPYELLTVDVEEEHQGAV MEELGRRRGDLQDMEPDGKGRVRLEYRIPARGLIGFQSMFMTMCRGTGIMSHVFDDYGTI KTGDVGERRSGVIISQDDGAAVAYALWKIQERGRLFVNPGDELYEGMIIGEHSRENDIVV NPIRGKQLTNIRASGSDEAIRLVPPVKLTLESAVEFINDDELVEITPKTIRLRKRYLKDF ERKRAARAEGKEFA >gi|319804496|gb|ADMF01000025.1| GENE 134 150339 - 151241 1021 300 aa, chain - ## HITS:1 COG:RSc1291 KEGG:ns NR:ns ## COG: RSc1291 COG0130 # Protein_GI_number: 17546010 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Ralstonia solanacearum # 8 296 17 312 314 244 52.0 2e-64 MKKKGDPIDGVLLFDKPEGLSSNAAMQIVRRLANAQKAGHTGTLDPMATGLLPLCFGNAT KYSADLLNAEKGYEARVQLGAETDSGDRTGTVTQTFDASGVTADMVREAAAAFLGEIEQI PPMHSALKKDGQCLYTLARRGEVVEREPRRVTIHELSISDFADGAFTMKCLVSKGTYIRV LAEDIGRRLGVGAHLIGLRRTRVGYLMIDNATTLEDLRTLGTPEAVRAKLLPADTLILSL ARVDLDEAGESRFLCGQRLALGLTTRGRTRVYGPRRGLLGTALVGDRGVLEPERLVTVEH >gi|319804496|gb|ADMF01000025.1| GENE 135 151255 - 151617 505 120 aa, chain - ## HITS:1 COG:RSc1290 KEGG:ns NR:ns ## COG: RSc1290 COG0858 # Protein_GI_number: 17546009 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Ralstonia solanacearum # 7 120 10 123 123 136 61.0 1e-32 MKNVKPGRAQRIGEQIARDLAELIPQEVRDPRVGLVTITGCEVTPDYAHAKVYFTVLGSD PAASAAGLNAAAGMLRSILFKRLHIHTVPTLHFAHDQSTVRGFEMDALIKQAVAKSGDAD >gi|319804496|gb|ADMF01000025.1| GENE 136 151774 - 154623 3664 949 aa, chain - ## HITS:1 COG:RSc1289 KEGG:ns NR:ns ## COG: RSc1289 COG0532 # Protein_GI_number: 17546008 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Ralstonia solanacearum # 317 949 329 964 964 804 72.0 0 MTSMTVKEFALELKLPVKTLLAQLRAAGVSKDAENDVLSDADKSRLLDSLRIERTQTSQR KITINRKEKSVIKQTDASGRAHTIQVEVRKKRVFMKNPQIQAEEEAKIEQAAREEAARRE AEAKRQAEEEARRKAEEERRAAEEAARREREEAERRAAAERAAEAKRLAEEAKAREEAAK KSADEAALKAARREAEKAKLDAEVAQATAARMEADAKRRDDARRQAEEEARRIREMMSRK AGVLTAKKPVKEEKPKPEAKPAQKTEDGQSRQNAGEKKQQPRRSNATRPAAAPAAEKKGH GDKKGSRNNANRSNGAWDEENRSHRSIKTRGDSGDESTGWRTARGRRSQDRHRQNEPAPQ PAENVVREVQVPETISVADLAHKMSVKATEVIKTLMTMGQMVTINQMLDQDTAMLVVEEM GHKAIAAKADDPEAYLGELETKEEYPARPRPPVVTIMGHVDHGKTSLLDYIRRAKVAAGE AGGITQHIGAYHVKTPRGIITFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTL EAISHARAAGVPLVVAINKIDKPEANPDRVKQELVNAGVLPEEYGGDVPFCPVSAKSGQG VDELLENVLLQAEMLELKAPNEGPARGLVIESRLDKGRGPVASILVQSGMLHRGDVVLVG AEFGRVRAMLNEFGKAQQSAGPSIPVEIQGLSGVPQAGDEVIALSDERKAREIALFRQGK YRDVKLAKQHATNLANLFSDVGEGEAKTLPLIIKADVQGSQEALIHALTQLSTSEVRVSV VHAAVGGISESDVNLAAASKGVIIGFNVRADAQARKVAEAEGVDIRYYNIIYDAVDDVKA ALSGMLSPEKRETALGLVEIRQIIRVPKVGNIAGCRVLEGVVRRNANVRLLRDNVVIWTG ELASLKHFKDDVREVKAGQECGLSLKGYDDIKVGDQLEVFEVTEVARTL >gi|319804496|gb|ADMF01000025.1| GENE 137 154818 - 156362 982 514 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 2 512 6 529 537 382 42 1e-105 MNSRDMLELVDVLASEKNVAKDVVFGVLELALASAVKRARFPGEDADIVVRVDRTTGEFS AVRRWLVVPDEEGLQEPDHQEMYSDIHDEFPDLQPGDYIERPLENVDVDSAGRRFAQDAK QVILQRLRDAEREQILAEFLERHETIVTGTIKRMDKGDAIVEVGRLEARLPRNQMIPREN MRTGDRVRAYVDHVGDTPKGRTVILSRTSPEFIKKLFELEVPEIEEGIIEIKAAARDPGA RAKIAVASHDQRVDPIGTCIGMRGSRVNAVTTELSGERIDIVVWNADPAQFVVGALEPAK VRSIVMLEDSHTMEVVVDEDNLAVAIGRGGQNVRLASELTGWQINILTAQEASEKRAAEV NRIREEFMKSLDIDEAAANVLIDEGFSSVEEIAYVPEKELFSIEAFDHETIEELRQRARN KLLADAITREENLRKADPKMLALEGMDNDLANKLVARGVKTLDDLGDLAVEELVEMTGLD EERAKKLIMGARAHWFGDGESADQPAETKAEEQK >gi|319804496|gb|ADMF01000025.1| GENE 138 156370 - 156930 693 186 aa, chain - ## HITS:1 COG:RSc1287 KEGG:ns NR:ns ## COG: RSc1287 COG0779 # Protein_GI_number: 17546006 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 7 186 3 154 162 111 40.0 9e-25 MNSSGALSALVKKTVEGLGYELVDVERLQRGLVRVTIDIERDGGISLEDCERVSDQLTHL FTVEDVSYERLEVSSPGVERPLKRARDWERFTGELAWVELFAPLKAEGFPEAGRRKLEGR IVGISGESGAEQIEFDYFEVDIARTPRAAALRARKKQTVEAAPVRVVFPLSEVEQAHLLV ELNFKG >gi|319804496|gb|ADMF01000025.1| GENE 139 157448 - 158650 1251 400 aa, chain - ## HITS:1 COG:RSc1286 KEGG:ns NR:ns ## COG: RSc1286 COG1187 # Protein_GI_number: 17546005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Ralstonia solanacearum # 36 275 209 446 598 257 63.0 3e-68 MKKPRFPKPRDPNPLTAQIKAAEGDFQGAFAAIDRAEAPTEKLQKALADAGMGSRREMER LIESGIVTVNGNPAKLGDRVSAEDVIRVEGRLVRRLSPEAADTPRVLLYHKPAGEIVSRD DPEGRPSVFNHLPRVPGGRWIAVGRLDFNTEGLLLFTTSGSLANRLMHPRYEMEREYAVR TVGELTPEDEAKLLAGVELEDGPAKFETLTDEGGKGLNHWYVVTIREGRNREVRRLFESV NLTVSRLIRVRYGAVELPPGLVRGKREEMDPADVRRWIAELDRMDRASSPEEAAAKAAEV KALKAAARLKWRERLEREAAEAERAPRRGAPGKSDRTGVPFSESRDLSDRRTQRAYGKSN ASSRTRNEEDGQRSEGVKRTPFGKRGSGGASGRGPRGGRL >gi|319804496|gb|ADMF01000025.1| GENE 140 158583 - 159320 411 245 aa, chain - ## HITS:1 COG:RSc1285 KEGG:ns NR:ns ## COG: RSc1285 COG1386 # Protein_GI_number: 17546004 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Ralstonia solanacearum # 7 171 7 170 304 168 54.0 8e-42 MAEFTTQTVLEAALLAARKPLSIREMRRLFSDELSAKTVRQELESLRVFWENRAMVLEEL SDGTWRFRTAEGAMTWLVRIEEERPARYSRAAMETLAIIAYRQPVTRGDIEEIRGVAVNP AILRQFEDRGWIETVGWRETPGRPALLGTTKHFLNDLGLKSLTELPSLMDSAPEEFALGI NNPSNHLLDDPSDAAPTQEELNFDQDHDAQKSAGKKENAVSRTDEEASLPQAARSESSDG SDQSR >gi|319804496|gb|ADMF01000025.1| GENE 141 159730 - 161028 1599 432 aa, chain - ## HITS:1 COG:RSc2337 KEGG:ns NR:ns ## COG: RSc2337 COG0172 # Protein_GI_number: 17547056 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 431 1 438 438 568 63.0 1e-162 MLDVTMLRKNLPEVVARLKTRNFDFPVDAFNELEERRKSVQKKTEELQARRNSLSKDIGM MKKNGEDASELLAQAAAIPGELKALEDELEEIREKLHDLMLRVPNLPSPTTPIGKDETEN VEVRRWGTPRTFDFPVKDHVDVGAPLGLDFDTAAKLSGARFAFMRGEVAHLHRALAQFML DVHTREQGYTECYTPYIVTASTMTGTGQLPKFEEDLFAAKKGGAYSDLEQMYLVPTAEVT LTNSVSGQILKAADLPIFLTAHTPCFRSEAGAYGRDTRGMIRQHQFDKVEMVKIVRPEES YDQLESLTHDAEVILQKLNLPYRVMALSTGDIGFGSCKTYDLEVWIPAQNCYREISSCSN CEDFQARRMSARFKDENGRTRYVHTLNGSGLAVGRTLVAVLENYQNADGSVTIPEALRPY MNGKEKIVPAAK >gi|319804496|gb|ADMF01000025.1| GENE 142 161161 - 162447 888 428 aa, chain - ## HITS:1 COG:RSc2338 KEGG:ns NR:ns ## COG: RSc2338 COG2256 # Protein_GI_number: 17547057 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Ralstonia solanacearum # 1 419 20 439 449 491 63.0 1e-138 MRPQTLDEVIGQKKLLGPGAPLRVAFENRRPHSMILWGPPGVGKTTIARLMANAFDLPFI AISAVLGGVKDIREAVDAAKQTLAATQRPTVVFVDEVHRFSKSQQDAFLPHVESGLFIFV GATTENPSFEVVNALLSRATVYQLESLSKEETGELIDRAMTREFSELTLNPEARGILIEL ADGDARRCLNALDVCCTMARERRIGTIDAAFLRKTTPATLRRFDKGGDNFYDQISALHKS VRGSDPDAALYWLMRMLDGGCDPRYIARRLMRMSVEDIGLADPRAMDVAVNAAEIYERLG SPEGDLALGEAAVYLACAPKSNAIEVAMKELKDFIRSDGSRPVPMHLRNAPTKLMKDLGY KEGYRYAHDEPGAFAAGEIYLPEGLEGRRWYHPTDRGTEARIAEKLRGLAELNQAAWKAG KGRRRGQG Prediction of potential genes in microbial genomes Time: Sun May 29 19:59:15 2011 Seq name: gi|319804486|gb|ADMF01000026.1| Sutterella wadsworthensis 3_1_45B cont1.26, whole genome shotgun sequence Length of sequence - 9681 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 6, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 455 338 ## Ppha_1041 transposase IS4 family protein - Term 609 - 656 5.5 2 2 Tu 1 . - CDS 738 - 1853 1255 ## COG1816 Adenosine deaminase - Prom 1878 - 1937 2.6 + Prom 1934 - 1993 1.8 3 3 Tu 1 . + CDS 2071 - 3432 1755 ## COG3069 C4-dicarboxylate transporter + Prom 3649 - 3708 2.4 4 4 Op 1 . + CDS 3803 - 3883 88 ## 5 4 Op 2 . + CDS 3932 - 5173 1167 ## COG0534 Na+-driven multidrug efflux pump + Term 5235 - 5272 3.1 6 5 Tu 1 . - CDS 5284 - 6531 435 ## COG3344 Retron-type reverse transcriptase - Term 7086 - 7127 12.2 7 6 Tu 1 . - CDS 7181 - 9625 2235 ## COG3468 Type V secretory pathway, adhesin AidA Predicted protein(s) >gi|319804486|gb|ADMF01000026.1| GENE 1 3 - 455 338 150 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 2 143 425 564 570 107 38.0 1e-22 IFVILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVAL GYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVE VRNRVAQYRWSTETTARDQMFLELFFDESD >gi|319804486|gb|ADMF01000026.1| GENE 2 738 - 1853 1255 371 aa, chain - ## HITS:1 COG:SMc04120 KEGG:ns NR:ns ## COG: SMc04120 COG1816 # Protein_GI_number: 15963885 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Sinorhizobium meliloti # 31 344 7 315 324 134 30.0 4e-31 MRSTNPGFVPDSPFTRELTAKQLAFFSAFPKAELHCHLLGTTSRETFIDLVRDSDAPISM AEIEGFYTRGEKPVGVLRIFRALESSILKKPEYLKRITLEHLERTAAQGVRYIELFWNWT GLKHFMTYAEGQDAIVAGLIEGEEKYGIVGRLVPSIDREALPEDAVELVREMTAHRSPWV IGLGIDYRETLHEPENFWKAYRLARDAGFKLTAHAGEFGEHWRNVETAMDLLECERIDHG YTITDNPELAERAADRGIPFAVVPTNSYYLRTFTDEEWAVKHPIRRMVELGLKVFPNSDD PTMHHISISESWLLMMNWLGFSLADLRGFLANSIDAAWVDDETKIVWRQLWLPEFDRLAR EAFGADCLPAA >gi|319804486|gb|ADMF01000026.1| GENE 3 2071 - 3432 1755 453 aa, chain + ## HITS:1 COG:dcuD KEGG:ns NR:ns ## COG: dcuD COG3069 # Protein_GI_number: 16131117 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Escherichia coli K12 # 1 452 1 454 455 227 33.0 3e-59 MFATIFAILILVLAGWAIAKNYDAKVVLFAAGFLLMYAALIMGSDVLTGKDASGLAWADP FKAVKDLFIKQYANAGLIILTLFGFAAYMSKIGANDKVIELLSRPLAAVKSPYILVPLVF WLGTLLSIIIPSAASLAVILMATLYPVLKAAKMTPLTAAGVIATTATIVPTPLGGDNVVA ARVLGFDHVVDYVFYHHAVISIPAIIVMGIVHYFWQKHLDRTEGAIKAAVDESELRQVNA DAPAWYAVFPVLPLGLTIFFWAFFKHAKVGLVEITLFSFALAFIAETIRRRDVKAAMKDV STFFNGMGDGFSKVVVLIVAASTMVAGLKAMGLIDAISGLVTGVENAGAGLMLVFSGITA LITFVSGSGNAVFYSFIELIPQIADKAGIDPIMVALPMQLTSNVIRAASPVAAVVIIVAA VVKVNPLMVVKRTCVPLLSGFAAVLLLSLIRYA >gi|319804486|gb|ADMF01000026.1| GENE 4 3803 - 3883 88 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSGSIWDKMILFALPLAFTGVLQQL >gi|319804486|gb|ADMF01000026.1| GENE 5 3932 - 5173 1167 413 aa, chain + ## HITS:1 COG:FN0667 KEGG:ns NR:ns ## COG: FN0667 COG0534 # Protein_GI_number: 19704002 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 2 358 56 411 426 173 29.0 5e-43 MAAVGNNVPIIGLIVSLCMGLALGANVVVAQALGMRDEERASSGVHTAFYVAVVFGVVMA IAGEIGADWIIACLEVPKSVQADSELYLRVYLLGMPFIAVYNFLAAVYRSQGDTQTPLWA LCFATIFNIAGNLFFVLVCDMGTGGVAFATVLANALAAGILFWRECRMTGPLRLELRRLL KPDAVSLRSIIRIGWPAGVQGAVFSFSNLIIQAAINSLGADVMAGSVAAFTIEINVYCFI NAFGLAATTFVSQNYGAGNLARCRRATWVSMGLNFCASVMMIAVVLIFERSILSLFTHSE AVMEIAITRILLVVLAEPISVVMETVSDAMRGYGYSMPPAMVTLFCICSIRIVWVYTVFA ADPTFDTLMIVYPISWAVTTAALTWLYFRHQKMLTAKHAHSRATSPEALPFTD >gi|319804486|gb|ADMF01000026.1| GENE 6 5284 - 6531 435 415 aa, chain - ## HITS:1 COG:BH0039 KEGG:ns NR:ns ## COG: BH0039 COG3344 # Protein_GI_number: 15612602 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 4 382 2 381 418 364 50.0 1e-100 MITLDQVLSGRNILRAIKQVVSNKGAPGIDGMTVDQYEAHHRRHWRSIAEHIRAGSYIPA PVRRVDIPKPNGGTRMLGIPTVQDRVIQQAIAQILVEAYDPHFSNSSYGFRPGRSALEAI EQASRYIKEGKNWVVEMDLEKFFDTVNHDRLMARLAKRIKDKALLKLIGRYLRNGIMQNG LVSPREEGTPQGSNLSPILSLIVLDELDKHLEGRGLSFCRYADDCNLFVSSRQAGERVLE KTIKFIEGTLKLRVNRSKSGLFRPSKSKFLGYTFVGTSGAPRVAKASFARLMYKLRPILR RGRGRSLLGTIKALTMILRGWRTYYALDDRKEVFERIDIHIRRHLRKLVWRAWKRPTTRE RELRRRGLPSEQAWKSSVNGRGRGGTPTPLTCSKHFPTVSFDEWGFTVSCQRPDH >gi|319804486|gb|ADMF01000026.1| GENE 7 7181 - 9625 2235 814 aa, chain - ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 518 814 341 638 638 76 22.0 2e-13 MQVLQFKTVHLAVIGAIASAFGMAAGNVNAEPLLTYESNKVVDGALSDAIVGTQGFLSPN KTAETYTGQNPTADILSFVNKDTGTNSLVYLTGDGSSLTVSKLSELNFSTEERLFGQAGK DANNVAILVSYKGAFAVTDVQQVNFGTQNKRFQGDQAINSWGGGKLDFSGIKTLAFYTDG GQAINMQSTSSLSIKEVDTLILDNYRSQEGDPERIYSAIQLMVMAGDDNDASTVQPTIDV DVGNLVIKADSKYTQSAGISVTDQTTDYQGTSSIKGSFTAKNISIDGGTYGIRSNRSTEN SRDSVLDVTAENSLVVNGGKNAVWLNNEAGHGITFNAEAANATFTGGEEGVLSENGTASI KADSLTVSGDKSALNFDKGSSLTLANKTDSQTANTTLNGNVTIAGSATFKNQDINQTAGT FHVSTLDASNSKLTFNTTENGGVTVGTLTGDLKLEAGASVTEKLGSAEKVAGALDSIIGG GAASTLKDNFVGGEASDMTGAWKYDAATGDVSYEGSRLSPTLTAVTHANAANLAQWRYEV NHLSERLGDVRSQNGALGAWARVYGTDAKVSDSVSTKFTNNTIQVGGDAKVGDTWIVGAA FGYTDNSTDFSNGSADSDGYTLSVYGTAVLPTGSYLDLISRVGRISTDIDVSTVTPFKAS YDNTTVGLSAEVGHRFDLSQIFYVTPQAELAYGRVFGDDYTGSNGMKVSQDDFDTLIARI GFQAGANFADNRGSIYLTASVNHDFLGDTEATASKAGAQDQKLKEDLGGTWFSYGVGAQF STTNNLSFYGSLTRANGSDYQEDYHYSVGARYVF Prediction of potential genes in microbial genomes Time: Sun May 29 20:00:02 2011 Seq name: gi|319804371|gb|ADMF01000027.1| Sutterella wadsworthensis 3_1_45B cont1.27, whole genome shotgun sequence Length of sequence - 144089 bp Number of predicted genes - 131, with homology - 98 Number of transcription units - 83, operones - 30 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 109 - 168 7.1 1 1 Tu 1 . + CDS 308 - 1339 705 ## COG0583 Transcriptional regulator + Term 1509 - 1545 -1.0 2 2 Tu 1 . - CDS 1475 - 1633 58 ## - Prom 1803 - 1862 2.5 + Prom 1448 - 1507 3.2 3 3 Tu 1 . + CDS 1560 - 3386 2348 ## SeAg_B4211 arylsulfotransferase + Prom 3468 - 3527 2.4 4 4 Tu 1 . + CDS 3589 - 4746 1172 ## Bpet0464 outer membrane porin protein precursor + Term 4764 - 4805 3.6 5 5 Op 1 4/0.000 - CDS 4986 - 6881 1798 ## COG2217 Cation transport ATPase - Prom 6970 - 7029 2.9 - Term 7043 - 7073 2.7 6 5 Op 2 . - CDS 7112 - 7387 328 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 7438 - 7497 3.2 7 6 Tu 1 . + CDS 7813 - 9198 1577 ## COG0733 Na+-dependent transporters of the SNF family + Term 9257 - 9298 9.5 8 7 Tu 1 . + CDS 9517 - 11430 1406 ## COG1835 Predicted acyltransferases + Prom 11901 - 11960 8.8 9 8 Op 1 38/0.000 + CDS 11998 - 13602 2123 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 13620 - 13665 3.3 10 8 Op 2 49/0.000 + CDS 13709 - 14653 1061 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 11 8 Op 3 44/0.000 + CDS 14655 - 15479 901 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 12 8 Op 4 17/0.000 + CDS 15479 - 16315 406 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 13 8 Op 5 . + CDS 16305 - 17207 443 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 14 8 Op 6 . + CDS 17230 - 18117 779 ## COG3608 Predicted deacylase + Term 18175 - 18226 -0.8 - Term 18164 - 18213 8.4 15 9 Tu 1 . - CDS 18261 - 18665 271 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Prom 18603 - 18662 2.2 16 10 Tu 1 . + CDS 18774 - 18899 72 ## - Term 19162 - 19201 7.1 17 11 Tu 1 . - CDS 19223 - 19549 535 ## COG2916 DNA-binding protein H-NS - Prom 19584 - 19643 5.7 + Prom 19924 - 19983 2.7 18 12 Op 1 2/0.000 + CDS 20032 - 20946 456 ## COG0583 Transcriptional regulator 19 12 Op 2 . + CDS 21164 - 22555 2057 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 22615 - 22657 4.2 - Term 22662 - 22699 -0.9 20 13 Tu 1 . - CDS 22759 - 23106 310 ## - Prom 23352 - 23411 1.8 21 14 Op 1 . + CDS 23198 - 24202 842 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 22 14 Op 2 . + CDS 24216 - 24542 487 ## gi|238021460|ref|ZP_04601886.1| hypothetical protein GCWU000324_01360 + Term 24571 - 24609 6.8 + Prom 24585 - 24644 3.6 23 15 Op 1 . + CDS 24780 - 25631 854 ## Amuc_1797 hypothetical protein 24 15 Op 2 2/0.000 + CDS 25665 - 26855 1031 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 27006 - 27052 2.8 + Prom 27351 - 27410 1.8 25 15 Op 3 . + CDS 27438 - 28580 1546 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 26 16 Op 1 31/0.000 + CDS 28775 - 29605 1146 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 29606 - 29645 -0.8 27 16 Op 2 34/0.000 + CDS 29807 - 30472 716 ## COG0765 ABC-type amino acid transport system, permease component 28 16 Op 3 . + CDS 30488 - 31249 635 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 31262 - 31321 16.2 29 17 Tu 1 . - CDS 31348 - 32079 514 ## - Prom 32101 - 32160 4.8 + Prom 32061 - 32120 2.6 30 18 Op 1 8/0.000 + CDS 32360 - 34402 1428 ## COG0642 Signal transduction histidine kinase 31 18 Op 2 . + CDS 34443 - 35099 635 ## COG4566 Response regulator 32 18 Op 3 . + CDS 35120 - 36607 1467 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 33 19 Tu 1 . + CDS 36810 - 37607 905 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 37683 - 37728 7.1 + Prom 37993 - 38052 4.9 34 20 Tu 1 . + CDS 38090 - 38536 430 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 39029 - 39088 1.7 35 21 Op 1 . + CDS 39211 - 39558 346 ## Sputcn32_0810 flavocytochrome c 36 21 Op 2 . + CDS 39564 - 41108 2017 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 41133 - 41183 6.1 37 22 Op 1 9/0.000 - CDS 41246 - 42490 1035 ## COG0842 ABC-type multidrug transport system, permease component 38 22 Op 2 . - CDS 42541 - 43674 1197 ## COG0845 Membrane-fusion protein - Term 43700 - 43740 1.0 39 22 Op 3 . - CDS 43772 - 44272 502 ## gi|238796288|ref|ZP_04639798.1| Transcriptional regulator - Prom 44327 - 44386 6.7 + Prom 44364 - 44423 7.0 40 23 Op 1 . + CDS 44454 - 44936 291 ## gi|212702518|ref|ZP_03310646.1| hypothetical protein DESPIG_00536 41 23 Op 2 27/0.000 + CDS 44991 - 46172 1228 ## COG0845 Membrane-fusion protein 42 23 Op 3 . + CDS 46186 - 49323 3173 ## COG0841 Cation/multidrug efflux pump + Term 49365 - 49417 12.1 - Term 49351 - 49404 16.1 43 24 Tu 1 . - CDS 49475 - 50509 1128 ## COG2008 Threonine aldolase - Prom 50557 - 50616 3.5 + Prom 50542 - 50601 3.2 44 25 Tu 1 . + CDS 50665 - 51570 887 ## COG0583 Transcriptional regulator 45 26 Tu 1 . - CDS 51533 - 51778 119 ## - Prom 51921 - 51980 3.9 + Prom 51632 - 51691 3.7 46 27 Tu 1 . + CDS 51777 - 52784 876 ## + Term 52969 - 53009 -0.7 - Term 52704 - 52752 4.5 47 28 Tu 1 . - CDS 52946 - 53620 318 ## Bcep18194_B1191 TetR family transcriptional regulator - Term 53698 - 53740 7.0 48 29 Tu 1 . - CDS 53753 - 55702 1868 ## COG2936 Predicted acyl esterases - Prom 55742 - 55801 3.6 - Term 56120 - 56163 10.0 49 30 Tu 1 . - CDS 56236 - 59604 2491 ## COG1404 Subtilisin-like serine proteases - Prom 59709 - 59768 4.3 - Term 60301 - 60353 12.6 50 31 Op 1 . - CDS 60554 - 61666 1258 ## COG3203 Outer membrane protein (porin) 51 31 Op 2 . - CDS 61723 - 63525 1289 ## COG1164 Oligoendopeptidase F 52 31 Op 3 . - CDS 63558 - 64949 1511 ## COG3069 C4-dicarboxylate transporter 53 32 Tu 1 . + CDS 65232 - 67022 1232 ## COG1164 Oligoendopeptidase F 54 33 Op 1 . - CDS 67007 - 67369 98 ## 55 33 Op 2 . - CDS 67282 - 67635 194 ## 56 33 Op 3 . - CDS 67607 - 67963 247 ## COG4737 Uncharacterized protein conserved in bacteria - Prom 68021 - 68080 4.0 - Term 68164 - 68206 3.9 57 34 Tu 1 . - CDS 68235 - 70367 1539 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 70403 - 70462 3.9 58 35 Op 1 . - CDS 71126 - 71350 92 ## 59 35 Op 2 . - CDS 71313 - 71435 119 ## 60 36 Op 1 . + CDS 71460 - 71639 62 ## 61 36 Op 2 . + CDS 71672 - 71734 73 ## + Prom 72336 - 72395 3.7 62 37 Tu 1 . + CDS 72472 - 72762 73 ## + Term 72769 - 72805 9.4 63 38 Tu 1 . - CDS 73467 - 73661 66 ## - Prom 73839 - 73898 3.5 + Prom 73528 - 73587 3.4 64 39 Op 1 . + CDS 73676 - 73921 91 ## 65 39 Op 2 . + CDS 73964 - 74086 92 ## 66 40 Tu 1 . - CDS 74521 - 74655 103 ## - Prom 74887 - 74946 4.4 67 41 Op 1 24/0.000 - CDS 75738 - 76772 1277 ## COG0208 Ribonucleotide reductase, beta subunit - Term 76789 - 76823 -0.4 68 41 Op 2 . - CDS 76825 - 78600 1833 ## COG0209 Ribonucleotide reductase, alpha subunit - Term 78671 - 78710 -0.5 69 42 Tu 1 . - CDS 78722 - 78883 57 ## - Prom 79065 - 79124 2.7 70 43 Tu 1 . + CDS 79089 - 79421 517 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 79483 - 79523 5.3 71 44 Tu 1 . + CDS 79597 - 79971 502 ## COG3169 Uncharacterized protein conserved in bacteria - Term 80009 - 80063 14.7 72 45 Tu 1 . - CDS 80106 - 81239 1123 ## COG1929 Glycerate kinase 73 46 Op 1 6/0.000 + CDS 81543 - 83192 1098 ## COG1479 Uncharacterized conserved protein 74 46 Op 2 . + CDS 83251 - 85350 1592 ## COG1479 Uncharacterized conserved protein 75 46 Op 3 . + CDS 85448 - 85930 420 ## COG2606 Uncharacterized conserved protein - Term 85938 - 85987 3.1 76 47 Tu 1 . - CDS 86074 - 87063 838 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Prom 87108 - 87167 6.9 - Term 87139 - 87182 9.5 77 48 Tu 1 . - CDS 87205 - 88071 843 ## GYMC10_2909 hypothetical protein - Prom 88218 - 88277 5.4 + Prom 88363 - 88422 7.8 78 49 Tu 1 . + CDS 88595 - 89731 1542 ## COG3203 Outer membrane protein (porin) + Term 89785 - 89827 9.5 79 50 Tu 1 . - CDS 89895 - 90407 600 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 90469 - 90528 6.5 80 51 Op 1 . + CDS 90806 - 94099 2316 ## 81 51 Op 2 . + CDS 94096 - 94419 266 ## + Term 94449 - 94489 1.9 + Prom 94559 - 94618 4.5 82 52 Tu 1 . + CDS 94757 - 95950 1463 ## COG3203 Outer membrane protein (porin) + Term 95994 - 96043 14.3 83 53 Tu 1 . + CDS 96414 - 97589 1178 ## COG3203 Outer membrane protein (porin) + Term 97656 - 97692 8.2 - Term 97524 - 97568 4.0 84 54 Tu 1 . - CDS 97602 - 97829 93 ## + Prom 97640 - 97699 2.0 85 55 Op 1 40/0.000 + CDS 97828 - 98511 866 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 86 55 Op 2 . + CDS 98528 - 100153 1347 ## COG0642 Signal transduction histidine kinase + Prom 100243 - 100302 2.5 87 56 Tu 1 . + CDS 100328 - 100891 585 ## Nmul_A0609 phosphate-starvation-inducible E + Term 100955 - 100995 7.4 - Term 100936 - 100989 17.6 88 57 Op 1 . - CDS 101034 - 101243 364 ## Ssed_1546 TOBE domain-containing protein - Prom 101294 - 101353 2.2 - Term 101260 - 101291 4.8 89 57 Op 2 . - CDS 101355 - 102158 669 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 102259 - 102318 3.5 - Term 102892 - 102927 -0.2 90 58 Tu 1 . - CDS 103065 - 103523 111 ## 91 59 Op 1 . + CDS 103320 - 104201 587 ## COG1403 Restriction endonuclease 92 59 Op 2 . + CDS 104229 - 105629 858 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Term 105570 - 105608 -0.1 93 60 Op 1 34/0.000 - CDS 105648 - 106382 470 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 94 60 Op 2 31/0.000 - CDS 106372 - 107223 906 ## COG0765 ABC-type amino acid transport system, permease component 95 60 Op 3 . - CDS 107309 - 108190 888 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 108343 - 108402 7.5 - Term 108702 - 108736 -0.5 96 61 Op 1 . - CDS 108854 - 110179 614 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes 97 61 Op 2 . - CDS 110160 - 110471 150 ## - Prom 110503 - 110562 2.7 98 62 Tu 1 . - CDS 110641 - 111636 830 ## COG0582 Integrase - Prom 111762 - 111821 3.3 99 63 Tu 1 . - CDS 111942 - 112568 317 ## gi|229164928|ref|ZP_04292744.1| Tn7-like transposition protein B - Prom 112715 - 112774 7.4 + Prom 112872 - 112931 3.3 100 64 Op 1 . + CDS 112960 - 113310 452 ## 101 64 Op 2 . + CDS 113371 - 114003 580 ## COG1335 Amidases related to nicotinamidase + Term 114079 - 114125 -0.6 + Prom 114123 - 114182 2.2 102 65 Tu 1 . + CDS 114232 - 114537 432 ## COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides + Term 114681 - 114716 6.1 103 66 Tu 1 . + CDS 115260 - 115478 131 ## + Term 115488 - 115520 3.6 - Term 115476 - 115507 3.4 104 67 Op 1 . - CDS 115555 - 115860 284 ## COG3093 Plasmid maintenance system antidote protein 105 67 Op 2 . - CDS 115934 - 116140 130 ## - Term 116205 - 116257 -0.5 106 68 Op 1 . - CDS 116301 - 116879 430 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein 107 68 Op 2 . - CDS 116934 - 117560 562 ## - Prom 117623 - 117682 5.8 + Prom 117717 - 117776 3.5 108 69 Op 1 17/0.000 + CDS 117803 - 118852 1072 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 109 69 Op 2 24/0.000 + CDS 118856 - 119686 585 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 110 69 Op 3 . + CDS 119686 - 120435 859 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 120627 - 120665 1.1 - Term 120535 - 120568 1.0 111 70 Tu 1 . - CDS 120580 - 121533 307 ## COG0583 Transcriptional regulator 112 71 Op 1 . + CDS 121591 - 121671 57 ## 113 71 Op 2 . + CDS 121668 - 123032 470 ## COG2079 Uncharacterized protein involved in propionate catabolism 114 71 Op 3 4/0.000 + CDS 123070 - 124377 1229 ## COG2704 Anaerobic C4-dicarboxylate transporter 115 71 Op 4 . + CDS 124428 - 125870 1330 ## COG1027 Aspartate ammonia-lyase + Term 125895 - 125938 -0.5 - Term 125872 - 125938 5.4 116 72 Tu 1 . - CDS 125988 - 126749 601 ## COG2364 Predicted membrane protein - Term 126775 - 126823 7.2 117 73 Tu 1 . - CDS 126889 - 128424 1791 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 118 74 Tu 1 . + CDS 128537 - 128743 122 ## + Term 128801 - 128844 -0.8 - Term 128735 - 128777 5.1 119 75 Tu 1 . - CDS 128956 - 129744 577 ## gi|302860184|gb|EFL83261.1| putative cyclic nucleotide-binding domain protein - Prom 129793 - 129852 1.9 - Term 129825 - 129871 13.5 120 76 Tu 1 . - CDS 129916 - 131760 2586 ## EFER_3637 putative arylsulfatase; possibly exported - Prom 131991 - 132050 2.3 + Prom 131781 - 131840 3.0 121 77 Tu 1 . + CDS 132039 - 132965 676 ## COG0583 Transcriptional regulator - Term 133070 - 133119 6.4 122 78 Tu 1 . - CDS 133122 - 133259 58 ## + Prom 133177 - 133236 3.3 123 79 Op 1 . + CDS 133401 - 133664 139 ## + Term 133665 - 133698 2.0 124 79 Op 2 . + CDS 133764 - 134000 74 ## 125 80 Op 1 17/0.000 + CDS 134447 - 135091 642 ## COG0765 ABC-type amino acid transport system, permease component 126 80 Op 2 34/0.000 + CDS 135072 - 135749 572 ## COG0765 ABC-type amino acid transport system, permease component 127 80 Op 3 16/0.000 + CDS 135752 - 136519 278 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 128 80 Op 4 . + CDS 136649 - 137482 1178 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 137604 - 137648 4.2 - Term 137861 - 137894 1.4 129 81 Tu 1 . - CDS 138021 - 140426 1934 ## JJD26997_1041 autotransporter beta-domain-containing protein - Term 140494 - 140541 7.2 130 82 Tu 1 . - CDS 140553 - 143408 2068 ## Dvul_2968 outer membrane autotransporter + Prom 143702 - 143761 6.7 131 83 Tu 1 . + CDS 143781 - 144087 226 ## Predicted protein(s) >gi|319804371|gb|ADMF01000027.1| GENE 1 308 - 1339 705 343 aa, chain + ## HITS:1 COG:PA2551 KEGG:ns NR:ns ## COG: PA2551 COG0583 # Protein_GI_number: 15597747 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 9 316 1 302 310 84 24.0 3e-16 MPTTNTAHLDLDRIDLRILRLVLILSNTQSLTKTAAAMKLSVSQASRLLADARAIFGTEI FSRHGPQMVPSPQLLELLPRLQNVFKALDSLLGGASTLNILESSEVIRIAAVDNTAMVFI MPFLKELHQRAPKLGIEIVPLGNQSAAGLGSGAVDFMYACDPHLPADPSLRQRLLLAAPH CVLVRKDHPLCEVPDGIVGPEELARYPMVIPTVSQPSGLNAMIMPFHEISSQRFLQSPFF LANAWSLLDSDGYTIHPIPLAEILTERLPLAALKPKDIVIPPWVPHLYWSVRTDADPLRQ WVRSFLISCARQRWSRYCSDDEAGWREAMASLEAASICSVCSE >gi|319804371|gb|ADMF01000027.1| GENE 2 1475 - 1633 58 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGVEMDSIMAAAATAAQIGTIFFICFSLIDPITLPETMFRNESKFRKPNKV >gi|319804371|gb|ADMF01000027.1| GENE 3 1560 - 3386 2348 608 aa, chain + ## HITS:1 COG:no KEGG:SeAg_B4211 NR:ns ## KEGG: SeAg_B4211 # Name: not_defined # Def: arylsulfotransferase # Organism: S.enterica_Agona # Pathway: not_defined # 1 607 1 606 607 720 57.0 0 MKKIVPICAAVAAAAMMLSISTPAMAMGGPSGPHVTYPVQGNIGEVIVNPYKVAPLTAVI RDAGYDLSDVTVRIVPKTNGQEITYKVSRTELKTHAGIPVFGLYPDWQNTVEVSYTRTFQ GKSEKFKDTYRFYVPSVYTVSTGMPNQVKPFEVKPVHVDPDFSDRLYLINSQLMSTMPVG SRFVWNNPSGGAVEWAFNSNIGIIDTKGEVRWWLLDQEIGDNENPWKSGYFMGFQQTKDG ALTWGYGQNYCKYDLIGRKVYDRRLPSGYSDFSHSFDNAQNGHSFLRVGSADYRRADGRR VHTVRDVIVEIDQDGRVVDDFRLMEILDPYRDNVIKTLDQGAVCLNIDASKAGQTISAAE LAEMDKSDNFGDVVGVGAGRNWAHVNSVDYDPTDDSIIISSRHQSAAIKIGRDKKVKWIL GAPDGWKKGWAEKVLQPVDKDGKPIKCENGKCEGNFDWTWTQHTAYRIDEMSDADTLILS VFDNGDGRGLEQPALAEEKYTRGVIYKIDQKKMTVQQLWEVGKDLGHEYFSPVTGITKYM ADKNSVVVFYSTAGLLGPSAGPNVKEEPAHPYLTEYRWGETKPAVELKINSVMGYQAFPI SVEQAFTH >gi|319804371|gb|ADMF01000027.1| GENE 4 3589 - 4746 1172 385 aa, chain + ## HITS:1 COG:no KEGG:Bpet0464 NR:ns ## KEGG: Bpet0464 # Name: not_defined # Def: outer membrane porin protein precursor # Organism: B.petrii # Pathway: not_defined # 6 385 1 372 372 84 27.0 8e-15 MKLKPISKAILAAAAATSIMPFAAQAADVNVYGLVATGLYYQKTEGADNGNVGMAQYKQT PTDSHFGITGREDLGNGLYVGFQLENGYSTDSGAMWENNRLFNRVARLYAGNSQIEVSMG RISTFTCASDPYSVFRKLRANMTASGLPGMAPATMVFNVGEMDNAIAFRTNGDDGFFVQG FYSNGSSSEETEYGWSNNNHVIQAAFGWTGQSLRIGTVLNWERPSHHTDGTKPRKNETTG IHILGSYDFGGPAVSAIFYKGSNDWRIGGAPDMDNMIKGVGGLTNYADSEDGMDLTVGFV SVGYPMGAHFFSAGLGIINADWKGISTNMKETKGTAYQASLMYYYNLSKRTQLYSGVSYS DGDKLLDTVDRFNQIFGTVGLQHRF >gi|319804371|gb|ADMF01000027.1| GENE 5 4986 - 6881 1798 631 aa, chain - ## HITS:1 COG:MA3632 KEGG:ns NR:ns ## COG: MA3632 COG2217 # Protein_GI_number: 20092432 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanosarcina acetivorans str.C2A # 115 627 134 644 647 369 38.0 1e-101 MKYFVSKLVDGLEYLLGLGGMKRDIAFLIISGVALLLSLFDAPLPFSAAWVAIILCGVPI VTEAFIGIITKFDIKADLLVSLALIASVIIGEDFAAGEVAFIMQLGSLLEELTVAKARAG IEKLVHLSPQKARLITPENEQIVPAEAVKVGDLLRVLPGETIPVDGVIISGHTSVNQAVM TGESLPVDKEPGDEVSSGTVNQFGAFDMRAAKVGEDSSIQRMIRLVQSADAGKAKIVGIA DRWATWIVVIALTSAALTWFFTGEIIRAVTILVVFCPCALVLATPTAIMAAIGNATKHGF LVREGDALERLAAVTKITFDKTGTLTYGAPKVVHVESISADFTADDLYAVCAAAEQFSEH PLGKAVVRCFKSDVRAAIDPCEAFEMLPGRGVSASVNGHAVLAGSRELLAEHGGAVPEEA EAAVQTHLSQGHTIVYIAVDQKMVGYAALADTVRNEAAQMIRALEGLHVSPVLLTGDHHS AAQAIAGELGIRDVHANCRPADKLNWISTYQKRLENVCMIGDGINDAPALKKANVGVAMG GIGSDIAVDAADIVLVDDDVKELPHLIALSKRMLTTIKVNMSFSMILNFIAIILAMLGIL NPVFGALVHNAGSVLVIINSAFLLKWKRRAA >gi|319804371|gb|ADMF01000027.1| GENE 6 7112 - 7387 328 91 aa, chain - ## HITS:1 COG:BH0558 KEGG:ns NR:ns ## COG: BH0558 COG1937 # Protein_GI_number: 15613121 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 90 12 100 100 63 39.0 1e-10 MRQCMDAENLHRRLKKILGQVQAIDRMIDEDVPCEDVLAQINAAKSALHGCGRVVLEGHI KHCVRDGIEHGDADRTIDSFTKAVERFANMT >gi|319804371|gb|ADMF01000027.1| GENE 7 7813 - 9198 1577 461 aa, chain + ## HITS:1 COG:Cj0601c KEGG:ns NR:ns ## COG: Cj0601c COG0733 # Protein_GI_number: 15791961 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Campylobacter jejuni # 3 442 2 431 447 488 62.0 1e-138 MEQRQTWSSRLTYILTVAGATIGFGATWRFPYLVGQNGGGAYVLMFILVMLFVGIPIILV ENVIGRRGQANSIDAFLPDSSKYSPLWKFFGYTGILGAFGILSYYMPLGGWVITYIYHLI LGLFGIEGGLDLSSPVTKELTSTFYHANIEQAPLMITICTAVFVLINWVILRKGIIAGIE RSVKFLMPLLFLCLIVMVARNLTLDGAWEGVRFYLMPDFSKLSGKLLLDVLGQVFFALSL GFGVMITLSSHLKKDESMVKTAVITGIINTLIAILAGFMIFPSLFSAGLSPDSGPSLVFK TLPIAFSHMAFGNFFAIVFFLLLVVAALTTSITIYQVIISVLHEKFGFLYVNAINTALIF TFIFGNLPCILSDGPLADVRILNRSVFDAYDFISGNICFVVTALGAAVYVGWVMKNRALD EITNGGKLHGSVYNIWYQFVRFVIPVVILAIFIYGLIPLFS >gi|319804371|gb|ADMF01000027.1| GENE 8 9517 - 11430 1406 637 aa, chain + ## HITS:1 COG:XF0778 KEGG:ns NR:ns ## COG: XF0778 COG1835 # Protein_GI_number: 15837380 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Xylella fastidiosa 9a5c # 4 608 10 689 706 311 34.0 3e-84 MTTMTAASRPKLWRNDITGLRALAVLPVLIFHAFPSLIPGGFFGVDVFFVISGYLISGII FRGIASSSFSYLDFYEKRIKRIIPNLILLLTFVAAAGWFILLPDEYANLGMHIDASTLFI QNFQLLSEIGYFTEDALRKPLLHLWSLAIEEQFYIVFPLICTLIWRLSRSVKMIGIAAAL IALGSLAACLSSSDRNFAFYFPLTRFWELGAGILLSYSETFIGFSTSRFSQNVRNGLSIA GILMIVLPMAFVTESTAHPGLITLIPVLGAVLVIAAEPDALFNRTLLCWRPMTFVGLISY SLYLWHWPLLAYLFIAVPDATPSVLIAALALSFVIAALVYFYVENPIRRCRNSGKAVLLL LAGLVLMLALGETIRQTDGFPQRPLKFEDKVISVRAENEWDGFEKAPRFKYEGVDIATPN PNAFPSLIFIGDSHMAQYYLRAQRLSEREHVNFGMIAKAGWFLFNDQRMGDYARAVKAIV ADKRVHTLVIGSMWGEIKEEEFYQVAATVRPLLETRKDLKVYVMLDYPWTPNVGGQQGIY DPLKHVNRITGDAVGMVQPFPAADDWKRGNEEIQRILGDAAEYIDPTPIVCPGQKCNLQA WYRDDDHLQPKRIEADGIWVDRIFEHAAAAESKERSR >gi|319804371|gb|ADMF01000027.1| GENE 9 11998 - 13602 2123 534 aa, chain + ## HITS:1 COG:BMEII0487 KEGG:ns NR:ns ## COG: BMEII0487 COG0747 # Protein_GI_number: 17988832 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Brucella melitensis # 53 531 41 521 526 416 43.0 1e-116 MKPFRLTRRALGSAVCMTLLAGTVLFTSPTPVHAAAQGKDTLVFVNYRDLRDLNPHLYAG EMFAQEMVFEGLVTLGNDGKYHGAVAESWDISPDGRVYTFKIRPNLKFTDGHVLDAYAVK ANFDALIDNKTRHSWLEMMRLLEGVEAPDANTFVIKMKEAYYPMLTELAVTRPFAFVSPN VMKDGKTKNGLTAFIGSGPYVLKEHVVDEYSVFEANPDYWGKKPAIKRIVVKVIPDNQTR ILALEKGEIDLIWGKNMIDADALNKYRDSKKFSIAVSSPTSTRQIVLNTTNDILKDKKIR TAIQHATNKSVISQGVFHGFEPGADTLYSTSIPYCDIDLKPYKYDMKEAAKLIEEAGYKR DGKRAPAVKDGKPLALGLLYNSNSVSEKTIAEYLQSEFGKLGMQISIRGEEEQSYRDNMK NGKFDMVFNICWGTPYDPQSSLAAMRQRVYGDYEAQLGLPDKHEIDAAITKILTSTDEKE RRELYRYVLTHLHEDAVYLPISFETNKALFNAELGGVGFLSNQYEIPFADMYWK >gi|319804371|gb|ADMF01000027.1| GENE 10 13709 - 14653 1061 314 aa, chain + ## HITS:1 COG:BH2075 KEGG:ns NR:ns ## COG: BH2075 COG0601 # Protein_GI_number: 15614638 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 1 310 1 308 310 275 46.0 7e-74 MRQYIIRRLLATIPLLFVISFFCFIFINLIPSDPAEVALRVRQTPVITPEAIAQVRAELG LDRPFFARYVDWVWNCLQGDFGVSYTNPSRTVLGELGRCLPATLSLAGLSLVYVIVLSLP IGFLSAVYKDSWFDRIMRGIVFATTAMPAYWVGLLLIWFVSIKLDLLPTSGSGTFAHLIL PAFTVALTYISTYIRLIRNNMLENMREDYVLYARVRGLKEGSILVKHVLKNSLQSCVTAI GMSIPQLIAGTIVVENVFAWPGLGKLCITSIFNRDYPVIQAYVLMMGVLFVIFNLLFDII QCAVDPRLRKQETA >gi|319804371|gb|ADMF01000027.1| GENE 11 14655 - 15479 901 274 aa, chain + ## HITS:1 COG:BH2076 KEGG:ns NR:ns ## COG: BH2076 COG1173 # Protein_GI_number: 15614639 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 1 270 3 272 293 264 48.0 1e-70 MLRVFLRNPVTQFCLVVILLTVFAGVFAPLLAPHDPYENNILMKFASPSWEYPLGTDQLG RCVFSRMLYGIRPTFFLSLLTMAGTIGLGLLMGVLAGYFRGPIDEFIMRVVDVMLSFPSQ IMILAVVALMGVNIENVIIANIFIKWAWYARMIRTAVVKCTESNFILYSKSIGSGNYFIL THHMLPCIATELAVLASLDTGWAILNISTLSFLGLGVQAPMPEWGAMLNEAKNVMISNPE QMLVPGIAVVVLVGAFNLLGDSLRDALDPKEVRL >gi|319804371|gb|ADMF01000027.1| GENE 12 15479 - 16315 406 278 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 2 255 4 258 563 160 33 2e-38 MSQQSVLDVQDLYVTFHQDKKSAELVKGVSFSVAPGECLGILGESGSGKSMTAKAMLGLL DRSFEVRGKVFFQGESLLEKDADALRRLRGSRICMVLQNPMSCFDPLYRIGAQMAETFQE HTDWSSAEIRTKSIEVLKLMKIRDPEDVLRKYPHQMSGGMLQRVMIGLALALKPSLIICD EPTTAIDSISQYAIMQEFLRIKTSRSAAMIFISHDLGVLSLISDKLVVMHRGLAVERGLP EEIFEHAKDPYTRELIDRHLSVMSTFSRAIRGEKVHAA >gi|319804371|gb|ADMF01000027.1| GENE 13 16305 - 17207 443 300 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 27 280 36 276 329 175 38 1e-42 MLLEAKDIRVSFRKENQTRLFGRERQEVLHGLSIDLKEGECLGIIGESGSGKSTFGRVLC GLLAPDSGTVRLDGLDLYGRLPRVDKARIQSSISIVFQDYTTSANPRFRVQGIIGESFRA LRLKGANISRETQRKETIELLERVGLDESFLTRYPHELSGGQLQRVCIARAVALKPRFIL LDEAISSLDAATQIQVMDLLKDLRRELNLSYVFITHDLTAITYFCDRVRFLHNGSFVEAV DDMSRIGDIRNAYARDLLRAVMGIGIHGAPDPEAEARMERDEEIGTPHGDVMHVQGQVLY >gi|319804371|gb|ADMF01000027.1| GENE 14 17230 - 18117 779 295 aa, chain + ## HITS:1 COG:mlr6093 KEGG:ns NR:ns ## COG: mlr6093 COG3608 # Protein_GI_number: 13475087 # Func_class: R General function prediction only # Function: Predicted deacylase # Organism: Mesorhizobium loti # 24 268 44 297 331 91 28.0 2e-18 MIELFEIEGGVTLRGYRTSGSRPGPHVLITAGIHGSEYPGILAARKLRAFLSQADIAGTV TVLPLCNPTALKERAKAIFPEDGKNLNRMFPGNPEGSASEKTAWAITQLQDEADFYIDLH GGDLFEKLTPYVYVPGNCAPEVTTTARAAAQVLSVPVRVLSQASTGAYNSAALRGTPSIL IERGACGLWEPEEIEAYFEDLKALFAHLGIIDGKAPVNTAQREAPFATYLSHSEFGLWFP RVKAGDDVLKGDLLGHLEDFDGAVLAQIHAPHDGRILYMTATLSAPAGCDLVALG >gi|319804371|gb|ADMF01000027.1| GENE 15 18261 - 18665 271 134 aa, chain - ## HITS:1 COG:MA0402 KEGG:ns NR:ns ## COG: MA0402 COG1917 # Protein_GI_number: 20089297 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanosarcina acetivorans str.C2A # 21 134 24 140 141 138 59.0 3e-33 MNEQNINPGIFGLGNPNNAYSQYFSGRSWLKMLTVERLVTANVTFEAGCRNNWHVHHKGG QILLVTAGRGWYQAYGEPPRSLKPGDVVNIPPEVKHWHGAAKDSSFAHIAIEVPAEGSSN EWLEPVSDEDYAKL >gi|319804371|gb|ADMF01000027.1| GENE 16 18774 - 18899 72 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLIFDQIFQNDCSIPSKVLPITIRTWNAMIHLFAAQPIIRY >gi|319804371|gb|ADMF01000027.1| GENE 17 19223 - 19549 535 108 aa, chain - ## HITS:1 COG:RSp1098 KEGG:ns NR:ns ## COG: RSp1098 COG2916 # Protein_GI_number: 17549319 # Func_class: R General function prediction only # Function: DNA-binding protein H-NS # Organism: Ralstonia solanacearum # 10 97 8 99 102 65 41.0 2e-11 MSDDKFVNELTQIEEEQRALDARRAAIKKQVVERVKVMIRTYHLTTDDITVPAPGEQDDD GRMVKYRDADGNTWTGRGRKPKWLIAAINAGAKLDDFRTYADRSAEEL >gi|319804371|gb|ADMF01000027.1| GENE 18 20032 - 20946 456 304 aa, chain + ## HITS:1 COG:RSp1267 KEGG:ns NR:ns ## COG: RSp1267 COG0583 # Protein_GI_number: 17549486 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 277 1 270 294 102 29.0 1e-21 MPLHYELSDLRLLLILMRTRSLSASGEAAHLTTSAVSLRLRKLEDGIGAQLFTRTGKGLV PTEAGTALAEAAVPILAESAALDARLNPFSKHDPEPLRIFSNSTGLQNFLCRIAADYLRE NSSFRAVLTEQRSSLTPEAVLTGEADLGLIGGIRELSPAYRTKLELVQFVEDRHVVILPR DSSAAQQFKNRPILFAELLNLRFAALTDASPMTAAMKERALAAGFRFEPIIEAPSFSLLV ELVARGPLAAVVPASAVPPNAPVEVRELEDSWAARPLAFVLPKARPALPSAIDFVEFALR TQKR >gi|319804371|gb|ADMF01000027.1| GENE 19 21164 - 22555 2057 463 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 22 463 42 484 484 387 49.0 1e-107 MKRTFIAAALALSVGAAFANPDAVVIGAGGAGLSAAVTLHDLGREVVVLEKMPMIGGNTV RAEGGINAAETPQQKKAGIPDTIDQFYADTMKGGHNLNDPALVRTLTTHAKDAVAWLVSL GADLNTVGRAGGAKYPRAHRPTDGSAIGPEVIRVLWKAAKDRKMDVRTQTRATEIIMKDG RVAGVKATTKDGKVYTIDAKAVVLATGGFGANQDMLVKYQPKLKGYATTNQPGATGDGII LAEHAGAALVDMKQIQAHPTAAPDGTLISESVRGDGGILINAEGKRFTNELLTRDVVSAA ELKQPGRFAWVFWDDATRKSAKLMDSYISMGLAVKGNTVAEIAKAMNVPAAELEATLKAY AAGKAAGKDAFGRADMPQAMQTAPFFAVKVQPAVHHTMGGVKIDTKAEVLNPAGHTIPGL FAAGEVTGGVHGGNRLGGNAQADIVTFGRIAGQSADAYLKTAK >gi|319804371|gb|ADMF01000027.1| GENE 20 22759 - 23106 310 115 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSVVLLFEAQVQPGRLEAYVHYALEAQRDLAAADGCLSTEQLMAVDEARRIMVKSIWRDS ASAQAWNRTNGALLAERAARLSLFEDYSVSLLCPAEFTPSAAPAPKIREAAAAAS >gi|319804371|gb|ADMF01000027.1| GENE 21 23198 - 24202 842 334 aa, chain + ## HITS:1 COG:BMEII0517 KEGG:ns NR:ns ## COG: BMEII0517 COG1296 # Protein_GI_number: 17988862 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Brucella melitensis # 103 330 15 239 246 165 41.0 9e-41 MLSGMPSARSADGQMVLGQLLPHLSDALMGMPEPHALFRCAEVLESIFQRIKFPFCPMTK PTEGALSAKDGTSSERVQTDAESADSEALSSSKAVSQSDHEDAWSDFWAGARSTLPIMIG ILPLGFILGTQGAQHGLSAIGMAIMCAFNFAGGSEFAAVALWSSAPSFIVIVCATWLINC RHIVLGAALTPFMQSAKVSTPRSLLAFFVMCDETWALSMQEVHRRRKAGRPAAELFSFSY HMGVGVTLWTSWFMVAAIGAAVGGSLGDLTRWGFLMAFPATFIGLVAAMRPALSKSGPMA ASALVAAGSSLFVPLHWSILLGTITGLVLAAVSE >gi|319804371|gb|ADMF01000027.1| GENE 22 24216 - 24542 487 108 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238021460|ref|ZP_04601886.1| ## NR: gi|238021460|ref|ZP_04601886.1| hypothetical protein GCWU000324_01360 [Kingella oralis ATCC 51147] # 13 104 3 94 99 63 42.0 4e-09 MSDTLRTIFALPSLQEFIVICGMLLATYSTRLIGWLVLRRHPVSPRMQRILDAAPCCVMI SIAAPAFMTTNIVTLVTLAATVVVALKTNLAITIVFAVAFNALLQTFF >gi|319804371|gb|ADMF01000027.1| GENE 23 24780 - 25631 854 283 aa, chain + ## HITS:1 COG:no KEGG:Amuc_1797 NR:ns ## KEGG: Amuc_1797 # Name: not_defined # Def: hypothetical protein # Organism: A.muciniphila # Pathway: not_defined # 2 283 4 285 290 363 60.0 4e-99 MQILQNVEYGGERPLFALRSAELDHVVIHPGESALKHVENITARECLFEGKYPFWHAKHV VLEGGRFSPGARAAIWYADDVRMKHTRIDAPKMFRDMENIDLEQVELSDAMETLWNCRNI KLRHVSADHADYLFMHSANIDIADYVHHGNYAFQYCRNVVIRDAEIHAKDAFWNSEDVTV YDSEIDGEFLGWHTKRLKLVNCRIKGTQPLCYAEDLVLENCTMDPDCDLGFEYSTVNADI RSPVTSIKNPIHGLIRCESLGKLILDEHRRSGSDCIIETGTAQ >gi|319804371|gb|ADMF01000027.1| GENE 24 25665 - 26855 1031 396 aa, chain + ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 4 389 2 383 384 321 39.0 2e-87 MKAFNFDEPTERRGTGSYKWDSADADVIPLWVADMDFRTAPCIIEALSDRVRHGVFGYEK VPDAWYEALQGWFARRHGWQIRREEVLCTTGVVPAVSAVIKAFTRPGDGVALMTPAYNCF FSSIRNNGCFAAETSLLMGDAGWTIDFAALEKTLADPRVKVLLFCSPHNPVGRVWTADEI RRTAQIAHQAGVLFVCDEIHGEFVFGGNRYLPAAQVEGVDPLRTVILTSPTKTFNLAGAG IAAIIAADPKVRAKIDRAVNDNECCDVNVFGVAADIAAWNQGEEWLEALLSYLQGNLAAA QAFFAEKLPLCRLSKLEGTYLLWADMRPMLGADLDTDAFCESLKTHEKVWAAAGSHYGRD GEGFVRINIATQRALLLEGLTRLAAGAERWQNREKE >gi|319804371|gb|ADMF01000027.1| GENE 25 27438 - 28580 1546 380 aa, chain + ## HITS:1 COG:CAC0930 KEGG:ns NR:ns ## COG: CAC0930 COG0626 # Protein_GI_number: 15894217 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Clostridium acetobutylicum # 1 380 1 381 381 343 47.0 3e-94 MKISTIAVHGGLTDTSHYAAAFPVYLTSTFIQKGPTEFREYGYSRTANPTRSDVEKHAAD IEGAKHGIATATGMAAVSLVFETLNAGDRVLISNNVYGGTWLYATELFKKRGVEFTVVDD FNTYDFETAPADVKLVYIETPSNPLLEVTDIAHVAKAAKARSWLLAVDNTFLTGVNQRPL DLGADVVIYSATKYYGGHSDLLAGLVVLNDDKLYEKLKLYSKALGGVLDPFDSFLLERGI KTLPLRLARHEENTHAIARYLSAHPGVEAVFYPGLESDPGYAVNRRQSKGAGGVLSFRFN EEAYDLEKFVKALKLFQFAVSLGSVESLISIPATMTHESYAPELQKKLGITPNLIRVAVG IEDIEDLIADFEQAFAAAKR >gi|319804371|gb|ADMF01000027.1| GENE 26 28775 - 29605 1146 276 aa, chain + ## HITS:1 COG:SMc03891 KEGG:ns NR:ns ## COG: SMc03891 COG0834 # Protein_GI_number: 15967027 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Sinorhizobium meliloti # 39 274 21 256 257 246 50.0 4e-65 MTHSISASAHSFSLRAVSRRWTLGAALALTAAFGFAANAAHAEDLDDIKARGVLTIGTEG VYAPYTYHDEKGRLTGYDVEVGRAIAKKLGVEAKFVETPWDALIAGIDAKRYDIGINQIG LSPERLAKYDFTKPYVSIKGVLLVRSDNEKIKGFEDLKGVRMAQTITSNWGKIAVNAGAE IVGVQDFAQSVQLIAQRRADAVVNSELAWVDYRKAQPNVPVKVVATTKEGIDVAIPVRKG NPKLLAALNQALDELRAEGVLKALSIKFLGIDVSTK >gi|319804371|gb|ADMF01000027.1| GENE 27 29807 - 30472 716 221 aa, chain + ## HITS:1 COG:mll3859 KEGG:ns NR:ns ## COG: mll3859 COG0765 # Protein_GI_number: 13473305 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Mesorhizobium loti # 6 219 5 218 226 214 56.0 1e-55 MDQRIIQILSDSFTQLLIPGICVTIPLTLISFAIGLVVAVAIALIRTAKTPVLEPLARIY VWIFRGTPALVQLFVIFFGLPSIGIVIDAFPSAVIAFSLNVGAYASEALRAAISAVPKGQ LEAGLCVGMSWTQTMFRIVLPQAFRTAFPPLFNEFISLVKNTSLASSITVYEMFMSAQRI AARTYEPFWLYLEAAVIYLAFTTILSRIQVWGEKKLQHYDY >gi|319804371|gb|ADMF01000027.1| GENE 28 30488 - 31249 635 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 241 1 241 245 249 47 7e-65 MLELKNIKKSFGGTEVLKNVGLSVSKGDVVAILGPSGSGKTTLLRIANFLETADGGEMNF EGEVLDLPKVSHRDAARIRRKTGFVFQNYNLFRNLTALENVTEGLRVVHKLSAAEAERIG RECLEKVGMGDRADHYPSQLSGGQQQRVGIARAIAANPDVIFFDEPTSALDPELVGEVLA VIKKLAEEGRTLVIVTHELDFARHVATKVTFMDKGVVVEEGAPEVFFTNPKEPRTRQFLS RYLASIGTPDYVI >gi|319804371|gb|ADMF01000027.1| GENE 29 31348 - 32079 514 243 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTFVSVPTYLEKTTHSTPADPQIRSANAPDARHGDALADAGIVVRPLAAADFQAVMDAYY QQWGMEDDGDPVVSGWWTAALFEKASFGCLAWKGDELFGAAVGHARSMKKLELGSSWKSS VVWAQEAVDKLGGEAMALLDEISICNRRLAQRAQADGRRFAAELDFLWVSPKARGMGLSK RLLTEVHAVMRAHGAQEYALFTDNYCDYSFYQRKPWEKIGEMIWPSPKWAGSSRSFMFAR RIA >gi|319804371|gb|ADMF01000027.1| GENE 30 32360 - 34402 1428 680 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 62 642 45 577 592 94 21.0 1e-18 MSFTLRPFASAALLLSMAGLCAGTLLAAEQTEPSEASAVRARPLVLGVVETAEPSFDDNT VRPVLKAMQSAAPGTQIDVVRLSSATFEVAVAQLKPDLVISPAADFLRIVDSIGAHPIGT RKTKYAKHPSKSAGGAVIALASRTDIQKLTDLRGKYIAATLPTSVDGMLAVRMELAERGF DSRQFFRSVRYLGYSMPNVIESVLSGHFDAGVVPVCTLERIEAEDLIERGALRVISPKSD DDTVCAHTSELYPDLVAATFSWTDPELTRLTTSALLASKSADAEFNWYGTSDFHRIRALE ETLQIGPWAYLQEMTPEALWRRWRFALFAVLAGLGLLLLNEWRLRRLVAKRTGELKRSME ERDRLAQRERAVRDRLSSLERMGAISQLCAMIAHELKQPVGAVINYVAVVKLKLGLQTVP GLPGETALNTSERPVDPLLLRALAGAEGEAHRIAAIVDRVRSYARRQHADPVPVDIVREA QNALRSLKAELRPFVVIRPPFSLTADDASKRRLIMRGDPLEIELLLLNVMKNAAEAVQGL PDGAVLVKFRRETLPSPLAENPSPSPAAPSAEAVIVEVEDNGPRLSDEAFERLTRVSQSV KDEGLGLGLGIVRSLVEENGGRIAITRREDLSGRGLRVTLCFDLDAEGLKAQSAPHTDPA DKSAAQAFQRSHEPAAKTAK >gi|319804371|gb|ADMF01000027.1| GENE 31 34443 - 35099 635 218 aa, chain + ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 197 14 206 218 146 41.0 3e-35 MTAKPLIRIVDDDEALTASSAMLLEAMGWDVAVWHSGGAFLDEADLMRPGCLVLDVRMPG LTGLDVQAELERRGSNLPILFLSAHGSIQMAVHVMRHGAVDFLEKPVEPMTLVQRVAQCV TASLSAKADDAAADEVRRRFDRLTPREREVIDGVLKNAPNKIIARTLGIELSTVKMHRAN AFAKLGVHSPGELLKMAYEAGIVSSAASAAESSDAQAF >gi|319804371|gb|ADMF01000027.1| GENE 32 35120 - 36607 1467 495 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 29 488 26 480 484 194 30.0 4e-49 MLRRTLLSSLLQTALLGAAGGIGSAPGKAAARNNARSAPVEECEADLVIVGSGAAGLSAG LAALEAGVRKVVILEKAAIAGGHTMLASGSVSAVFGADVDKLIDAMLTAGAGENNPALVE TLARQSGAAFEWLAEHGVNWMKTPYRAVGSPGAWSYSTGSAQAGYDYVQCLNRAYHRLGG RILYRTSASSLLFAAAESLDGHARSAVAGIFAERPEGPMLLIRTPAVIIAAGGFTANRAM IAAFRPDIDPQTPTTANPRGELLDGSTGDGILMAQAAGAKLVDMSAVEVVPFTGGRLTDF VGGDVWLNAEGRRFVSEGETFDVIRSAVEAQPEGRLWVVSDVKSNKGATLPVKLMSGTVA SAESLEALAKALQVPFTTLRASIDRWNQSVKSGWDQDFNRPMPAQAQTIDTPPFYYGEER FSIHYTSGGIAINPKAQVLDRDDHPIPGLYAAGETTGGVHGRTRLGGCALTDCFVFGRIA GKEAALRSHKSLRPR >gi|319804371|gb|ADMF01000027.1| GENE 33 36810 - 37607 905 265 aa, chain + ## HITS:1 COG:STM0830 KEGG:ns NR:ns ## COG: STM0830 COG0834 # Protein_GI_number: 16764192 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 4 259 2 247 248 169 40.0 4e-42 MHKRRLIQFALAGLAGLTIHPLAAAAASQAADEDLPLLVAGMDAAYPPFGFKDSKTGEFV GFDVDIIRAIGRTAGFRVKVENIPFDGLIPALKTRTIDIAINDIGITAERAKSVDFSDRY YIAGMGIVVAKGYQGIQSAKDLEGKRLAVTIGSTGEIAAKRIPHAQVRVFNTLSDCFLEL INNGVDAVLNDIPTNDYYAVTAGAGKVDSLSISLAAEDLGIAVKKGRKDLLEKINKGLAS LKASGEFTAIYKKWFGREPSPELLR >gi|319804371|gb|ADMF01000027.1| GENE 34 38090 - 38536 430 148 aa, chain + ## HITS:1 COG:CAC3445 KEGG:ns NR:ns ## COG: CAC3445 COG0454 # Protein_GI_number: 15896686 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 148 1 147 147 149 55.0 1e-36 MELVKIKDDRKTLYMDLLLIADEDVRMIEKYLSRGEMFALCDGDLKALCVVTEEGPGVYE IKNFVTVPKYQRQGYGQRLISLIADHYKHLGKELYVGTGDSPATLLFYEKCGFQKSHTVK NFFRDHYDHPIYEDGKQLADMIYLKRSL >gi|319804371|gb|ADMF01000027.1| GENE 35 39211 - 39558 346 115 aa, chain + ## HITS:1 COG:no KEGG:Sputcn32_0810 NR:ns ## KEGG: Sputcn32_0810 # Name: not_defined # Def: flavocytochrome c # Organism: S.putrefaciens # Pathway: not_defined # 6 109 4 107 589 72 38.0 4e-12 MALTPKLTALFAAGVLAAFAAGAASAAGMPSKINGPHAKLPCSTCHKNEMTAPPKETCLS CHGSYDKLAERTAKLTPNPHFSHRGEEDCTNCHSLHGKSRLECNDCHSFNLNFKW >gi|319804371|gb|ADMF01000027.1| GENE 36 39564 - 41108 2017 514 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 28 511 26 482 484 169 29.0 2e-41 MNAQNFSRRSFLGAAAAAAAAAAPLAHAASVKQEIPAQWDMEADVVVLGAGGAGLMAACQ AHDRGAKVVVFNKGGSSYHTGTNLCGGLFTACGSRMQKADPKIKDDWKAFADDIIAYGEH MSLKEPVYGFTKHSGEAFDWLEDHGLAAHHLEPYAGHTNVRAHRQDSFKGRDYIDVLEKE IKARKIEVHHRMPVVKMYFDEAANRVVGVQCGREGNFINCRAKMGIVMATGGITGTPESL DRWVPSVAGKGVAIGGEGNDGSAMMVAVRDVGTPLSHMQYIASNPCGIVVNGRSGPYCRW WFITGQGGILINKNGARFITEREGICHVTPKLAGNPDGCHYVLADQATWERTLKKIKLSA LVGLPSWSEERVLAEFKKQENLWKCDTLEELSKESGVSLEGLKKQIEIWNKAVETKVDNQ FGRTDQEWQIGAGPYYMIRMFPWNNLSCGGVRVTEEFQVLGWDMKPVNGFYAAGETVAGV HGAFYCGGNACGFAHTSGFMAGKYVTGFKETKEA >gi|319804371|gb|ADMF01000027.1| GENE 37 41246 - 42490 1035 414 aa, chain - ## HITS:1 COG:RSc0165 KEGG:ns NR:ns ## COG: RSc0165 COG0842 # Protein_GI_number: 17544884 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Ralstonia solanacearum # 12 368 33 378 381 61 21.0 3e-09 MFSGRFPPYHKMGIAVALITIVAFSIILSHDVVFEAPVAVIDLDQSRWSAELIEKLNASP YIQVERVVHSPADPRRMTAHDRVQAVIFIPKDAQASLLRGAQTVRLGTYLDDSNTAQNGE LISQLNKITAELSAERAASRPGGVSALGQTTAGTEALLSPLRMGFRYLANPTGQGATGTV INFLLFFSLMFHGLTSLMIIGRLRVTGVWNASVLSGGLVSLLLRGVPYALIYTTVVTIAI SILTTFGQLRFAGSIWQFVPALFLGAMANTWVAYLLSWNCKNPGEGAGCLIFLVPVGFIL GGATMAVGFLHGWVKFASFGIPLVWIFKFWRDIGLRGIDWAGMADLWGCFFGYLTFIALL VGIRFWREEVKMMVDRKDAWETLRDVENAPAEPDPFPDPDGRRGEPIALRPTAK >gi|319804371|gb|ADMF01000027.1| GENE 38 42541 - 43674 1197 377 aa, chain - ## HITS:1 COG:PA3402 KEGG:ns NR:ns ## COG: PA3402 COG0845 # Protein_GI_number: 15598598 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 63 372 48 316 323 68 25.0 2e-11 MNLSKKQLRDITRTALGFTGVLCAAAALIWLGNRNDAVTNAESLKAGILTAHQVKAAFET VSGRLVDRPIEEGMTVEAGAKLLAIDGTDIGLSIRQTEALIHQADAQIAAEEEGIRLALA EANTEEQTLWRQIEASEAARKSASAEWLRAEADWKRAQRLLPQGALAQSDFDALKAAAVS AREGLSSAERALDAACVGAREEDRQKLSHTGSAEGMRLDAVVNARQAAENRRISLESLKA GREASAAALEQLKVNQSRLTLKAPEKAKVLEVLYEKGELVSPNAPAVLLESERLYFDSYV AENKVKGFQEGAKVTCWSPALNQNVRGTVLSVTAAPDFADLKMVRERGQADLTLFKVRIN VEPAEGLLTGMTLEVKL >gi|319804371|gb|ADMF01000027.1| GENE 39 43772 - 44272 502 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|238796288|ref|ZP_04639798.1| ## NR: gi|238796288|ref|ZP_04639798.1| Transcriptional regulator [Yersinia mollaretii ATCC 43969] # 4 163 9 166 170 118 44.0 1e-25 MPKRLMPTRDNLRRSHGALNASENDIAGVELMLYLIRASDVIREEIYGALRRDTGLTEGK FALLMILYDISEPVPLVELSVRIGVSPSTTSIMVTRMLQTEEPLVAKTVDPVDARSALIS LTPAGRRLLESAMLPHFNRVSDFAKTLSSAERETMIALLKKLVAGH >gi|319804371|gb|ADMF01000027.1| GENE 40 44454 - 44936 291 160 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212702518|ref|ZP_03310646.1| ## NR: gi|212702518|ref|ZP_03310646.1| hypothetical protein DESPIG_00536 [Desulfovibrio piger ATCC 29098] # 1 157 1 151 153 117 42.0 2e-25 MSWTDLPDLTELLLRLGCAREQSRDARHKPEKIDGFIPTAPGKILHQLQLVHPEGLGVKA LAQAVSLSPGAVSQTVQTLVDVGLIDRSTAPNDRRAVVIRLTDEGIRQIHRHEAMMNALL ESLIAEAPPEDRAAFHRTLELGLAKARSEWSERSTAASSD >gi|319804371|gb|ADMF01000027.1| GENE 41 44991 - 46172 1228 393 aa, chain + ## HITS:1 COG:mll6731 KEGG:ns NR:ns ## COG: mll6731 COG0845 # Protein_GI_number: 13475614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Mesorhizobium loti # 2 385 16 401 402 145 31.0 2e-34 MKRSSIRLITLAALSTACLAASLFGTVQAAPAPNAKLPVVAVQAVEMLPQTVSRRLAGRV TALHRVNITARVSGEIKEVAFADGALVKKGDVLYRLDDVQYQAALQSAKAAVMQAQAESL YAERDYKRQQALYEQKASSRDVLDAAERTAKTSAAALASAKAALITAEDNLKHCVIAAPM DGRMSFTNYSAGNYVTAAGSASTTLATLVSVSPVRVRAALSMKDIAGLFGSIAELQKSAA VQAELSDGSVLSEIGRITAVDNAADEKTDTLYAAAEFKDPLGRLVPGSTVTITITLSKPD SLFPAVQPSALQHDAEGAYVWVVNAPQDGAPKTQKRRVEVGRAVNGLQLITAGLQKDDVV VVEGMQKAGEGKTVKVLQAAAQSAGNTSEQPSN >gi|319804371|gb|ADMF01000027.1| GENE 42 46186 - 49323 3173 1045 aa, chain + ## HITS:1 COG:BMEI1629 KEGG:ns NR:ns ## COG: BMEI1629 COG0841 # Protein_GI_number: 17987912 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Brucella melitensis # 3 1040 2 1033 1051 796 42.0 0 MFSKFFIEHPRFAAVVSLVITISGLISLWNLPVEEYPEISPPTLFISATYAGASADVVTQ TVAIPIENEINGVEDLLYFSSTSSNSGTYNCQVTFKTGTDSDIALVNLQNAVKRADAQLP SEVTKTGVSVEKRGSDTLGMFVFRTNGASMDLNELANYVDKTLKDDLARVDGVSSTSMMS ESEYAMRIWLDPVRMAGMGIGTSDVTNAINAQNIQAAPGNVGSEGSSDSVTYKVNVTGRL ADPAEFGAIILRSDAASGRVVRLSDVARVELGSSSYTGGTTINGEPAVGLALYRSPDANA LATMNRVKAKLAEWEPRLPEGVTVSPAYDPTKFIQTTMEEMVVTILSALLLVILITWAFL QSWRATLIPAAAIPVSLIGTFTVMAALSLSINTLTLFGLILVIGSLVDDAIVVVENTERL IAQGLSPHDAAVKSMQEITGAVIATTLVTVACYLPLAFYGGMVGAIYRQFAVSMCVALSI SAVVALTLSPALCALVLRPGDGAADAEQASRGFSAKFFKPFNRFLSASRESYVRGSAWLI RRSLIAAVGMIAAVGVTWFLYGRIPTAFIPSEDKGVIFANIELPADATQNRTEAVMETVL ERLRTIPGVQTVMQNVGMSMLSGSGEYAGMAVLDLKPWNERTTPETQLSAIQAEIAKRTQ NIAAAEIVSFTPPAIMGLGGTGGASFEICGVGTVDTAHLSDAVNRFKSALGDRPETLFAM SSYSADTPQLRFTLDREKAELLQVPASDVYSTMQTLLASYYVNDFTMNGSNYEVIVQADS KYRGSNLSLEEIPTTSSDGNIVPLSALGSLSWEVGPQQITRFNKMTSAGVNAQSAAGVSS GAFYKAIEDTAAASLPKDYHIEWTGLSYQERQNAGQIVTLMGLALLFAYLFLVAQYESWT IPLSVMLSVLFAVMGALLGLELTGGDMSIYTQLGMVMLIGLAGKNAILMVEFAKTARESG LSIIEAAKQGASIRFRAVMMTAWSFLFGVLPLVFATGAGSASRRAIGITTFAGMLTATLI GIFFIPFLFTLFETLREKFHAWRRS >gi|319804371|gb|ADMF01000027.1| GENE 43 49475 - 50509 1128 344 aa, chain - ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 1 343 1 340 341 328 48.0 8e-90 MLNFACDYLDAAHPKVFEALMKNNFVKTGCYDESESDCFCNAAREKIRAACGVPDAEVRF LSGGTQTNKVVISTMLKPWQGVIAARTGHIAVHEAGAIEASGHKVIEIAEQQGKISAEAV DKVFRAWHGDGNRLHMVEPGMVYITQPTEYGTVYSLAELTALSKVSRRWGAPLYVDGARL FYALGSAANDVTLSDLARLADVFYIGGTKCGLLFGEAVVFPKAGTVPGFFTLMKQYGAML AKSKVLGIQFDALFTEELGLELGRHAVLQADRIREALTKKGCELLFGSTTNQIFLRLTNA EADRLGQSVAMSFWERLDDEHVVKRIATSWATDPKDVDALIALF >gi|319804371|gb|ADMF01000027.1| GENE 44 50665 - 51570 887 301 aa, chain + ## HITS:1 COG:BH2117 KEGG:ns NR:ns ## COG: BH2117 COG0583 # Protein_GI_number: 15614680 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 1 285 1 287 290 147 30.0 3e-35 MNLEKVHYLLTAIECGTFSLAAEKLGMTQSGLNRQISSLETELKTTLLLRGRRGVVPAKG AEPIIARLRDLMTAERCVYEEIAAVKGLLTGSLTIGSYFSISTTWLPQLLKQFSDAYPAI TLSTVEGADAELIERLRNGSLDCAFLSQHSYDGDFFPLMETEFVALLPPGHPLIQADCVT VRQIAEEPFIYPRLHHNSDIDDFFTRHKIEPKIHLQTNDPYSAYAMVNAGLGVSVNNRLQ SINLKGNVVLKPFHPQERVALGLALPSLETASPALMRLVSMAREIAETFPKGPWGAALPA E >gi|319804371|gb|ADMF01000027.1| GENE 45 51533 - 51778 119 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTGGFKDWAKFFLGENCSVCQSAISIDTIAANHTANVYESNICNAEPREAFEIISNNRCF SRSEGKNEGFIRRGVPLPMDL >gi|319804371|gb|ADMF01000027.1| GENE 46 51777 - 52784 876 335 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQNKSALLLSLTAAAAAAALSGCVSTGPVDPERAAKHTPEYQYQKKLSRANNLATEFGVK HIMDRPAPKDVKLTSDGSMLLDGAVWGALHGTVAGSGILSGTADWNIGFGLWLAQSLLLP STDPTPDSLVGYVRAEEAQDRKAAVNAFVARAIPAIAESLKKQDQFKDYQISYHIDKTGT GNNEAGIEVVNEELGCKPWKDTLLGMGQCGIEIVNFGLWTFAPQISTPRFTYPQIQVWYI QGKDVQLKFRDAVLKPKFDWAKAMMAAAPDLPEYVYAYINTRKGPAPEKALNPPFFVEKD RVNFFIIPQNDETEEPSSEEEKKSLQDQTQTTAAK >gi|319804371|gb|ADMF01000027.1| GENE 47 52946 - 53620 318 224 aa, chain - ## HITS:1 COG:no KEGG:Bcep18194_B1191 NR:ns ## KEGG: Bcep18194_B1191 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: Burkholderia_383 # Pathway: not_defined # 1 194 1 187 219 86 32.0 5e-16 MGSSARPTQTEGTARRRGRRPASEVSGRSILLETAQRHFSRCGFGGTSLRAIARDADVTP ALVCQLFGSKEGLYDALLEKLALDQQTQLAELVRLADLAERYPKAAFERWVQMLVQIGPA ISDVPALLMHEVDPMPEEHDNGESRIPRITEKLVRPFKRASMPILRKALEAGIIRGTSPD LVFSLLMGAVSATLLAPQISGESPAANMDFRERAAENLLLLVLK >gi|319804371|gb|ADMF01000027.1| GENE 48 53753 - 55702 1868 649 aa, chain - ## HITS:1 COG:L61341 KEGG:ns NR:ns ## COG: L61341 COG2936 # Protein_GI_number: 15673217 # Func_class: R General function prediction only # Function: Predicted acyl esterases # Organism: Lactococcus lactis # 75 647 33 571 572 335 35.0 1e-91 MQRRTLLTSAVGAAVAATFSTTAGAVQNRVTGSLPNVIDKKIRIYGNDAYPVPHRRAMEI GAVRARMPHDFVPGRRFLLKKGEIRTPGGAPLESDVVLEENMALKMRDGTTIYTDVFRPN DDGRHPAIVAWSPYGKTVGGQRLDDVPKRSGVPQNAVSGLEKFEGADPAFWTAQGYVVLN PDPRGVGHSEGDISYWGRQLAEDGYDFIEWAAAQSWSNGRVGMAGNSWLTVSQWFIAAEN PPHLAAIAPWEGFCDHFEEPGTRGGIPEPGFPEVIIKTFAGPNYIEDQPRMIATHLVKDA YWENMAARLEKIQVPAYVVASYTNPVHTHGSFAGFMRIASKDKWLRVNNTNEWYDLYSPK YRAELLAFFDRYLKGMDNGFEKTPRVRYSVLDSGGTAERVDVPAENWPLPETTLKRLYLA EDGRLTESLAANASSLQYDSASGSVKFRYVFPENADVVGYMRAKLWMETPESDDMDVEVV VRKVSPTGEALHRPIPEFIAPDAVATGRLRASMRELDLKRTTELEPFYVYKHPKKLRPGE RVPLDIAVWPMGEHYRKGEVLELEVRGVKIVPTTFEMGFGRHPIPVPAAGGTYDPLHPPV MEVLGGDVPVPPSVSAATVPTPASANHGAHIVHFGGANDSWLQIPILKI >gi|319804371|gb|ADMF01000027.1| GENE 49 56236 - 59604 2491 1122 aa, chain - ## HITS:1 COG:PA3535_1 KEGG:ns NR:ns ## COG: PA3535_1 COG1404 # Protein_GI_number: 15598731 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Pseudomonas aeruginosa # 21 517 3 424 453 248 35.0 7e-65 MNRIFKTKWSDSHKQYVVTDENHSNKGKTAKSAVTMAVSALMLVAGAASATYMEPGFKAQ DAAQMGQAKTSWETAEYQKNWGLSALKASTAYALGFHAQSVKVGMMDSGILTTHKELSGD RWHTVAASGEFTHDGERYPQYAYGRTPQDTGKYKKGDKFTVDGAYKAGVNDNHGTGCAGV YAGNRDGSGMHGVAWGSDFYSANTGGSDDMNYGPFPDYGFFKAGYDALVNSGVKIINNSF GTNLKQVDERGNIVYYYYSGPELTTVHDIEYEYFLFKKQYNEGPSFVDAAWDAVKGKDVI QVFTNGNNDRANPYHRALYPYFNPEAEAQWIAIAGLKQVDSLNAPSNYKLEVKFNEAGYA KYWTLVGPGQNGNTANIAGDDKYGRYGGTSMAAPFVSGAFAVLASRYQDMSALQVREVLL TTANHKNTDGTDMEGWANVSGDAPAEGEVSDRMGWGVPDLEKGMYGLGQLSGKFEYNLKA GNLDVWSNDISQIALDQRAREDLAWLKSATEDGTTDGKVVVSNVLTDYKLTNTSTASANQ DGREHNYDLAGIKDKNISLEDAKKWRLEYYEKRAAAIRTKIANGLYDGSLVKNGDGTLVL TGNNTFRGGVTLNEGSLYGFNDSFGITETAAGKANGLVTVNGGKFGVVNKYDDKLTLKGT ITDGASDHSVDAVINAGGTFLVMAGQDVEMGTLTFKDGAGYSVSSTDIDVLKAAYEGNAQ TGTVKLDKLTGLDAAAANPDYALFKTELTFDETSSILTGTLSADKSLSLANYGSGNGRKI GQAIDAERTGALFESLLSASKAQVESTYASLGDDFYLNSRNASIVNGLTLTRAVKDQAAG IGEGRVVEMADGNGRLWATGIGAWSSIDYGSSDMDSNFYAGLIGAEVDVADSTKIGVFFG AGTTENKAGSFKVESNDIHVGLYGLTNVEDIASIHYGFIYTHQSADANRTLTVKDLAGYN KWSGDADVTQIFAEAAFKGFNTAAYSVEPYFGLAWIHAESDGYSESVGGMTFTTNPEDQD LQVSSLGIRAGVPFSFGAAKVTLKGDLAWNHFFGDTEAEARMNLAGSGTALIKGGELSDM ATVGLGVEAQLSKTATFGLSYTGAYDGDVTMHGLRANLRFAF >gi|319804371|gb|ADMF01000027.1| GENE 50 60554 - 61666 1258 370 aa, chain - ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 117 1 127 389 63 37.0 6e-10 MKHTALHLAVFGVLAGAALAAQAADVQIYGRVDAGFLYEHKKGEDTFTQKAGGRAHNRIG FNVVEDLGNGVKVKAYLENGFYIDNGQFDDSKVLFNRRSILALQGSLGEIGFGRMGTVQS TVAPYTMGLIKYDPFGTSYGNASIGSTFSNTSRTNNTVTWVSPTLNGFRVGASYSLGDKS DDLYANLADRRHTGALAVDYTGKDVYFSLNYGNVDYGNQEAKSKNSNGQAISFGGWYRFI PEARVFFGAQYSTHWEKGAGLSSAKVTVATAAEQNDGWEGYSLLLGTDYVIGSHKLIGGV QYYDGELSGNSDYNFRRTVFSAAYEYKLAKKVWLYFAATHSVGGGDLKAAADKEGLTKTT QVFTGLNFNF >gi|319804371|gb|ADMF01000027.1| GENE 51 61723 - 63525 1289 600 aa, chain - ## HITS:1 COG:BH0871 KEGG:ns NR:ns ## COG: BH0871 COG1164 # Protein_GI_number: 15613434 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Bacillus halodurans # 14 599 7 589 589 245 29.0 2e-64 MTKDLQSILQAPEWSMDDAYGSVGSEKWNQSIERAAALLNALHSMERPVAREALADHFKE FDEANTLISSLAAFAKCQGAKDAGDEEASAAAGAVGTLQVKLEAAALPLFEAAEALPADD ALWQSSPLADWRFVICERKNEWHRKLSPSDREWLSDFEEKCFLPLGAVFKTLQKGVDFEA ENSQGESERIRAAKLVSVIKGAPDRTLRRNVNIGLAKSYGERAELYAALLNELHGFRLAA FGRAGVDAVDVSLAQNRMSRGALFAMREAIVRHLDEIREAVRLRAPYFEKGARRLAVYDL MAPAPQQGKNAVPALIPYAEGIDIVKKALGAVHPEMSDFIELMLRNRWVDAAPSDKKIGG AFYSRFNEFRIPRVFSSYMGTITTVLQQGHELGHAFHYWIMRDLPVVQTEFPMTLTETAS TFNEALVRRYLLEHAASDAERFSMLWQELRSAANFLLNTMVRFDFECAFIEQRKAGVVPA KRCVELMREAWGNWYGDSTEGADDYLWAYKLHFYKTDQLLYNYPYTVGYLLSSGLLAELD KRGPDFMPFYRAMLRDTGRDTVDGIVRRHCGADAANPAFWETAMQAPLAAVKAFAALSSK >gi|319804371|gb|ADMF01000027.1| GENE 52 63558 - 64949 1511 463 aa, chain - ## HITS:1 COG:PM0230 KEGG:ns NR:ns ## COG: PM0230 COG3069 # Protein_GI_number: 15602095 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 4 452 3 437 449 259 40.0 7e-69 MAGIIFGCIILVLVGWAIVKGKYAPFILIASGVAMLAFSVFFDTGTFMPKKALPTGNDYL NIIEFIRYMFSTRLAGLGLLIMTMVGFASYMTHIGANDAFVNIAIKPLSIIKSPYALVFL AFLLGKAVSMVITSAVGLGVLCLALMGPALAALGMNKKAIGAVFVTSGAASLVLIGGSTA AAAKACSLSILDYVFVFKIPAALPTVLVMGLAHVFWQKYLDRREGWNPQEHMGEQLVFEG EDVKKPSTAAPKFYAILPFLPMIFVVVFSRYCIDSIKLDITTLMFFCVAIAMICEAVRWR GSIEKLGAGLKAFLMSMGKAMSGVVALVIAAGIFAEGFKALGMVDAIVNLSSSVGAGAIG MSILFVVITTLVTIITGSNGASFYPLIEMVPKIAKDMGVNPVMLVLPMHQASTIARPLSP VAGVVVAIAAMLKMSPLELVKRASVPSVAGLIAHHIFAFWLSL >gi|319804371|gb|ADMF01000027.1| GENE 53 65232 - 67022 1232 596 aa, chain + ## HITS:1 COG:BH0871 KEGG:ns NR:ns ## COG: BH0871 COG1164 # Protein_GI_number: 15613434 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Bacillus halodurans # 179 578 178 575 589 131 25.0 4e-30 MKQTNALPSWADDGAANVRSAKFQELSFSLDVTLGALAGATAAAAERPGTYPEVLQLFAR GQDLVKTLRTICRAHLGLSAADTAAVKARGDIGHKAAELNKLVEPIFRDLAERASNDPIF SAHPELRLWKEARRLRGTILDDLPPDKVAFANDVSASVLEPVRALHTHLTSTMALNVKDS DGHSRIQGFGASIAVLKNADDPVLRRTTFEAMNAWFASHSPSFLDVLNAHTGFHLALLKL AGEELFPYVMRSERMDLRVYRALFNALEARLPRIRLAVSLRQRAFGDGPMRVWNLLSPSP DALYTKGRFFWDAIEDLKRAFAQLDPEFTKFLDTAAHSGWIDAHGQSMKTGGTWCDDLPA LDAVRILANYLPTLSGEAALSHLLGAAWHMQVLHQAPAPARVPMLAMTELAGNFSETILS RSLLRAAENTPEEKLHRWQMLKRLTNCLLTIPARHRLLKHILLERQKGLLSLETVNKLSV ESWHHYFGDAAVGEDRYVWAYKTHFYRTQPVFYDWQYTFGFLLSQVLADQFEQHGSSASG ANLKSVWIDSATLPANDFAAKHLHADLASQAFWLRAVDRALLPVTRLENKPDYFSS >gi|319804371|gb|ADMF01000027.1| GENE 54 67007 - 67369 98 120 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGMREKSNNSIGYRFNECIRQAWSSCFDVNLTLENLEANRLKIPFVILLRAWDILKSLNS DLQGVWNRRIMQEYCLDYSSAESRTAIHSMCYSLEKPITAISPPALVSSPAGRVTVYEEK >gi|319804371|gb|ADMF01000027.1| GENE 55 67282 - 67635 194 117 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLRQLKEFKMSVKMSDALRESINDINEILYAQKLIDKKEYERVSAQFSMAAVSTEMDGR QFAQIRRKLNLSQAALGQILGTSVSTISKWECGKNPIIPSVIVLMNVLDKHGLAVLM >gi|319804371|gb|ADMF01000027.1| GENE 56 67607 - 67963 247 118 aa, chain - ## HITS:1 COG:SMc01995 KEGG:ns NR:ns ## COG: SMc01995 COG4737 # Protein_GI_number: 15966221 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 2 110 16 124 128 62 35.0 1e-10 MRKLHCSDEMMAAACAEIAAGLTDADLGSNLYKKRIPIEGRGKSGGLRTIIASRFNGRWF ILAIWVKSDLVNIPSDQLRCLKQQTVLLLELEDAAIEKLIANGSLVQILDEPSTTQGV >gi|319804371|gb|ADMF01000027.1| GENE 57 68235 - 70367 1539 710 aa, chain - ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 435 710 362 638 638 80 24.0 1e-14 MTNETIGQADVVGVIARKGKTTVVNTSGDLSITASGTAKEGTDPIPVHAYGGTIEIYAGG NIKLLSSDGNAIMSQPTVNDGGKFSSSVSLTAGGDIVIESDGAAILAGLIQEGLSDKSSS VTINAANVSITSKKGVAVKIYDQDQTWNPNDPRSGNAFVELHADKKLALNGATYGIDQVR NGAESTIGSTSKFSAGEEIVINGDSAGIRATNKEGIHSPNNLNIYAPKINVTGASSAAVI ADSGANIQFAGDEKGTTKTNVTLSGNQDAVQTVETSTVGFTNAAVDVTKGNINSNGKSES NGKLELNNSNVIMHGGNFKANTLTGTGTSSITLNDAKSTVSVSDNQSKNLSVTAGSTLND TFNSVEEAAAALKNVTNITNNNQKGGSYSFAGQSGALSDTWTADNDGNITSRTTNQSLDA FGNYNAMTLVQWRNEVNHISQRLGDVRDSSTTIGAWARVYGYDSSYDDNVSIDFKANSIQ AGGDYRINNTWLVGGAFSYTDGEGKFSNGSADSDGYSLAAYLSGFFDCGAYVDFVGRIGR LSTDITAYSDASEFKGSYNNTTFGLSAEVGYHWKLNDTFYVEPQAELAYGFVKGDDFTGA NDVRVEQDDFQTLVGRLGARIGASFADGAGTVYAHASVNHDFLGDADYTASLGSVSRDLS VDIGGTWVSYGIGAQFNTSKNLNFYGTLERANGSEYQEDYRYSVGMSYRF >gi|319804371|gb|ADMF01000027.1| GENE 58 71126 - 71350 92 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRGNTKRLTRKVNFSSRRSLAAVTFFLAPAVHQRADAVLARIAILTQRAKGVNVWANFET KDIGVGPKGQSDCQ >gi|319804371|gb|ADMF01000027.1| GENE 59 71313 - 71435 119 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGLNTTALGYLALLFIVIASVAIGLKLVYERKHETSDKEG >gi|319804371|gb|ADMF01000027.1| GENE 60 71460 - 71639 62 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVCAVNKFVTIATSKNTRAVWLNDQRQSLSQTFIGTVNGDALLTQSTAASVAAIPFCRY >gi|319804371|gb|ADMF01000027.1| GENE 61 71672 - 71734 73 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHMKHPYVPSNDWLASNVP >gi|319804371|gb|ADMF01000027.1| GENE 62 72472 - 72762 73 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVACMPPPAHPYLPRPGKEFMAQAVDGAPAKGVKTTKPACRRAKSMMQGTVMTHQTLASC LIIPQHLSIAIDGGVHLDGLSLVIVIVLWIMIRKKP >gi|319804371|gb|ADMF01000027.1| GENE 63 73467 - 73661 66 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSSKHLMLKPRRKKKSIVNNESIFCIILKPRNRMTLSSQSLPLWFGALELNNPLLAKNN GSGR >gi|319804371|gb|ADMF01000027.1| GENE 64 73676 - 73921 91 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCKEYWRFFASQQMPSEQTFLQIYYRCSSIAFTNSSAACCVQFLLRQCRTVGQMIPRVFH SEMDPSNQKKSLVVKPGHRTG >gi|319804371|gb|ADMF01000027.1| GENE 65 73964 - 74086 92 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGWRYETKSTIITTNRPIGPIAQLGLVLGDPMAATAISTV >gi|319804371|gb|ADMF01000027.1| GENE 66 74521 - 74655 103 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDASLSSWEIMAHTILVCTGDIHVDGVLAAVLVIAWYLTTTRR >gi|319804371|gb|ADMF01000027.1| GENE 67 75738 - 76772 1277 344 aa, chain - ## HITS:1 COG:RP512 KEGG:ns NR:ns ## COG: RP512 COG0208 # Protein_GI_number: 15604372 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Rickettsia prowazekii # 26 342 3 321 324 348 53.0 9e-96 MEDEKINQPMTELAGEAAKAERAGGLLESRDYYKPFQYPWAYEAFMQSEQMHWLWTEVPM LEDVKDYQQKLTDSERDFLTKILRFFTQGDIDVSGAYVNSYLPRFKQPEVRMMLSSFAAR EAVHIAAYSHLIETLGLPESIYNEFLQYEAMAAKHDFFNEVCRDKGDLAAQIAAFSAFTE GMQLFSSFVMLLNFTRCGTMKGMGQIIAWSIADETLHTESMTKIFREYITENPELWTDEL KAKIYGIAEVMVDLEDKFIDLAFGVSEMKRLTREDVRSYIRYIADRRLMGLGLKGIFKST TNPLPWVDAMLGVTHTNFFENRVVDYAKGALTGSWSQVWGSVKP >gi|319804371|gb|ADMF01000027.1| GENE 68 76825 - 78600 1833 591 aa, chain - ## HITS:1 COG:RC0647 KEGG:ns NR:ns ## COG: RC0647 COG0209 # Protein_GI_number: 15892570 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Rickettsia conorii # 3 590 11 607 607 553 46.0 1e-157 MAVQMNFERDKLFDELGLMRLRESYMRSSEKSPQERFAFVAETFGSNPEHAQRIYDYASR HWLSFSTPILSFGRSKKGLPISCFLTYMEDSAEGLVDTLSEVNWLSMLGGGVGIHVRIRS ADEKSVGVMPHLKVYDAACLAYRQGSTRRGSYAAFLDIDHPDIIPFIEMRKPTGDQNMKA LNLHHGVNLSDAFMEKIEASMRDSSYDDTWELRHPSTHEVVAKVSARDLWQRILEMRMHT GEPYLVFIDTANRALPSWLKDKGLSIHGSNLCTEIFLPTSHDRTAVCCLSSLNLEYFDEW KNNQQFITDAMELLDNVLQYFIDHAPDQIARARYSAMRERSVGLGALGFHAYLQKKGVPF ESAAAKSINKQVFRMIRTACAEADKKLCAERGACPDAADSGVSRRFSHWMSVAPNASSSL IMGGTSPSIEPYRANIYRQDTISGAYIMKNRFLKAKLAELGLDTEEVWADLIAHDGSIQH RDDIPQDVKDVFKTAPEIDQRWIVELAADRQEFIDQGQSVNLFFPPDVSIAYLHACHFLA WKKGLKSLYYNRSDKLRKADRVGVKAERKRIEDEIDMRAVADNSTCLACEG >gi|319804371|gb|ADMF01000027.1| GENE 69 78722 - 78883 57 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGAKTLSRFHDYRLCVDAGVCGFSPPKAKIPKLFGTTYNHKIWWFFDDKTLL >gi|319804371|gb|ADMF01000027.1| GENE 70 79089 - 79421 517 110 aa, chain + ## HITS:1 COG:HP1458 KEGG:ns NR:ns ## COG: HP1458 COG0526 # Protein_GI_number: 15646067 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Helicobacter pylori 26695 # 1 106 1 99 104 78 39.0 3e-15 MAEILNVDEKNYDEVVLKNEKPVILSLGASWCGDCRRARPFYERMAQDYEGRLVFASADS DACPNLKKELGVQHIPTMVIFKNGKPLDGRLVEVKTPSELKAFIDAGLAA >gi|319804371|gb|ADMF01000027.1| GENE 71 79597 - 79971 502 124 aa, chain + ## HITS:1 COG:VC1574 KEGG:ns NR:ns ## COG: VC1574 COG3169 # Protein_GI_number: 15641582 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 7 122 17 123 127 84 49.0 4e-17 MLSKGFLTIGLLIISNVFMTLAWYLHLKLQAAKVISFWPVWAVVLFSWSIALFEYSFQVP ANRIGFDGNGGPFSLLELKVIQEVITLTVFTLFSMLLFGLKLQWNHLAAFFCLVMAVWFT FQKP >gi|319804371|gb|ADMF01000027.1| GENE 72 80106 - 81239 1123 377 aa, chain - ## HITS:1 COG:STM0525 KEGG:ns NR:ns ## COG: STM0525 COG1929 # Protein_GI_number: 16763905 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Salmonella typhimurium LT2 # 1 377 1 380 382 231 43.0 2e-60 MKILLLPDSFKGSLSAQRAADILCAAANEVLPDAEVVKLPAADGGEGTLEAVKAAVGGAY LPLPVTGPCGQSVQARYLSVGDTAVIELAQAAGLGQRLPGFSPMRTTTYGVGQLISHALQ VGHRRIVLGLGGSATTDMGCGMAAALGTQFLNAKGQPFLPVGETLHLVKGVRLNGFFFQK KAPRIEALCDVENPLYGTNGAAYVFGPQKGADADEVKRLDAGLRVVAGLFEKQGAKVNSL PGGGAAGGAGAGVACFLNGRIASGIDALLDLMKFDDLVKTADLIVTGEGSVDGQTAGGKA VQGIARRAAGKPVIVFSGSAKLDPASWEKLRASGVAAVFPIVQEPCTLAEAMAKASENLR VTALNVFSLLKLQQTAG >gi|319804371|gb|ADMF01000027.1| GENE 73 81543 - 83192 1098 549 aa, chain + ## HITS:1 COG:jhp1430 KEGG:ns NR:ns ## COG: jhp1430 COG1479 # Protein_GI_number: 15612495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori J99 # 15 263 6 254 282 63 22.0 1e-09 MQIIESSSVAGVIKRSFDRPGRNWIKHIVFPDFQRPYCWSLNDIQKILDDIDELRYSPDE ERYREEDEYYLGAICIMPLRDSDSPEHAHDMALLDGQQRLTSLMILARVLYERAMRSKTD VLRSYGANIAWIMGRDLVWKRAFLYQEPATLRHIRQIYFALDREYRQLEADAALDDAQNA GALSFYEETLLRDLRRFRYILLSGRLAVNVLQSLKEAEQYFQGENNRGLPMSLLDILKAY HMRFETAPDRQKEIRRIWSAFNESPPSESDRETLDDEDSKAAAARLAQRKYAVEAHVIPA LLMRCDIEPWPECANNPQNADLLKGIIGTHRRDRIVDGKLSASTNQHLFDLLEPVQTGIG FFRMLDQYRRIDEALDELEQRAFNPASGLKLNNDQRLILRLALIAWTDRFAPRTAFKSSI SSQALAAALAADAEFRTFARHFARFLNRLRNADKQIPGAFNRLDKAALLRCLRYWNTRTN LIFLPHRSATPAACKRSLLQAMTPEAMAPYIKNTTWIERYRLAYDMEAALEASAADTEQK TTDGAFDHE >gi|319804371|gb|ADMF01000027.1| GENE 74 83251 - 85350 1592 699 aa, chain + ## HITS:1 COG:PM0595 KEGG:ns NR:ns ## COG: PM0595 COG1479 # Protein_GI_number: 15602460 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pasteurella multocida # 11 218 23 212 633 74 27.0 6e-13 MGSLGIDQSRYVIPVYQRPYAWTSVQVSQLMQDLLDFCRSPDIQSTYSLGTIVCDEETPG VFSILDGQQRLTTIDLLLEEISRRLDRPANEKHKRIISAYRYLSGMEANCESPLPACTEQ RNRIAGALTEFIERQGLREDLAAQTFLRALEACIHDRVSIRRVVIPLSDKVENEAPAMFE IINMRGQQLSALDILKSRLLSRFSEKDRFGRTFFTHLWRSTDERLVSPTEAAKGYDLKGW HSGQVSPSGSKDETDDTPISAALTIDEIIADADEAPLESGDQKGRADDPPKRKTDQPPAE DEGSREQFVPPIDMMNMLVIANELFKYDKARTADAENGPLPAYEALATTNFDRRFDHIVQ AEAPGTADVWRLMGALSLVLQTVGVWGRYRQRENEAFEGAPDAFNQLIQTFMAASGFSAS GQYWLLVLSATALEMSLGTDGKLPDSPEAFLAMKKPAFAKIRKIAQLRLLAWAYRAAEAG QARGAEGVFKLTAETPSENTAQTQLLAAQAAVEAAAPGWHYHDGTLSQFDLFLTDYVLWV DGHTGGNRPFAALKRAMDAFAEKAQSPEETELAGAFRAFNWRAFEEKARTLRIVARSDIE HWLARNRADLGKDADAAREELLRRHGFGNLALINESDNSSLGNGSPAGKAELVLKRMSNP TPKLLWLAVLSQQFPNLDGQHVEGLTELWASYIGEFSFG >gi|319804371|gb|ADMF01000027.1| GENE 75 85448 - 85930 420 160 aa, chain + ## HITS:1 COG:FN0673 KEGG:ns NR:ns ## COG: FN0673 COG2606 # Protein_GI_number: 19704008 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 153 1 153 154 107 39.0 7e-24 MSFDAAYAALKAQHLEGRVRRFPGSSATVALAAQELGTAEGAIAKTMALLGPDGPILVLA AGDRKIDGGSFKRTFHFKPKFVPGTDVEALVGHAPGGVCPFGRRDGIPVWLDRSLLSHAE VWPACGDDASGVRLTPEELYRAAGAVGWCEVTKSALAKAA >gi|319804371|gb|ADMF01000027.1| GENE 76 86074 - 87063 838 329 aa, chain - ## HITS:1 COG:AF0088 KEGG:ns NR:ns ## COG: AF0088 COG0715 # Protein_GI_number: 11497708 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Archaeoglobus fulgidus # 35 326 20 299 300 138 31.0 2e-32 MATDFVLMNRRTFGIRTAALCFAAGMMVSPFSLAAEEPLLKIGVLPAADSVLLYAAESEG FFESRGLRIQLLPFKSAIEIGAAMRAGELAGHYGDLINVFTQNAAGAPQAVAATVTYANP AERNFALVTRPGSNLTSLEDIKMHPGADTAMSASTIIDYLLDRMEATTGLPPSAMKRVEV RQIPIRLQLLLAGKMETALLPEPLCSLVESKGGRALWDDRTLAEPLAVVAFRKAAVTPQT AAAFRAALADAAKAIESDPEKFRALMVKKSLLTKAAASAYKMPTYAHFGTADGLPPLPSA ADVKRTADWMIGKGMIKAMPKLEEVVFVP >gi|319804371|gb|ADMF01000027.1| GENE 77 87205 - 88071 843 288 aa, chain - ## HITS:1 COG:no KEGG:GYMC10_2909 NR:ns ## KEGG: GYMC10_2909 # Name: not_defined # Def: hypothetical protein # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 1 249 104 351 374 118 29.0 2e-25 MTDKAPSQLSEHPQSEVHASAFKPAEHPVTALALLRVPAWEPERLAAQLDLDWNIKAEPV PTDFREPWLFRVNGSLVVIGFEGHPVPGNAADEQAKNCPDWPDAQEMASTHLAYLALAVV AEEATLVENARTAMKILGSLTRQPNVSAINSAGRLFEPERFRSDVLTMQHSETAFPIFNM VFFGLWQREEDAPLSGYTLGLDRFACPDLEILESPDAPAVIRAQMIAAAMVQITRGAALK DGEVLTLSGTFFKAELKASSAVPGAVTTHLTAIEKAPESEAPKKKKRF >gi|319804371|gb|ADMF01000027.1| GENE 78 88595 - 89731 1542 378 aa, chain + ## HITS:1 COG:RSc3091 KEGG:ns NR:ns ## COG: RSc3091 COG3203 # Protein_GI_number: 17547810 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 378 1 376 376 85 29.0 2e-16 MKKTLAALAVLGAFAGSAAAADVQLYGVVDEGFIYTNTKVTDEKSDNQFQLGSGLNLGSR WGLKGTEDLGNGYKVGFKLESGFNADTGTLQENRLFRREAGLTLYGPFGSLGFGRFGGIA SAAGTYDLIGYVDSFDGGDNNVWGFAASSRYDNVVAYQTPRFAGLQLTAQYSFKTDSTAK NDTPTGFSGDEGTSAAKRYASIGVSGDYGAAQFAAGYELTKYGANASGVREVADKDGSLV FVGGNYNFEVVRVYAEAQYFEGLSGIKNAYNDEFTKGDPSSDGLKGYGLHLGAKAPIAAG TLTAGLYYVDGKQDFTSTADQDFKYYGVSARYVYPLSKRTSVYGGAGYGQTSVDNAAANG SDEDTKLVQAYVGLSHTF >gi|319804371|gb|ADMF01000027.1| GENE 79 89895 - 90407 600 170 aa, chain - ## HITS:1 COG:FN1079 KEGG:ns NR:ns ## COG: FN1079 COG0783 # Protein_GI_number: 19704414 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Fusobacterium nucleatum # 4 141 5 142 144 124 45.0 1e-28 MKSEKINAYVATLAVWNVKLHNIHWNVEGHLFKGIHEYTESLYDRAAEQYDETAEILKMR GEMPVATVAESLQASVIEELPSRVFSCCEAVAVVQADMEKVAKLAREIRDEAAEADDFLV QGTFEGYLAGFAKDLWFLRAMRSDAHAGEACDAKAEEKAAGAKRCCRKKA >gi|319804371|gb|ADMF01000027.1| GENE 80 90806 - 94099 2316 1097 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTNTTFNKDAEERLNDPADQPNTRANACLETRKALLAATPERFAVGSRAVKLSEAARLM RSLNALPFHDIEPTIRAAGITEQEALSGCDELSAALGGVLHAAAKRTIELPEWSAGQFAR LCSSADCAQKSSAEPAVSGASLTVAGNIDIEGLTTKAAMELPEQPCLRSAAPVKSLLEGG ALLSAVAHAGEFLGLLSPDAPGRSIMGGHPVNALNGEWRTGGAAAAAANLVAAGASAGAL VLGRPSDAGESAIRAGVSAFRPAQSLFNSQEGFASSWRFDGWSGIARRARDAFAIAWTAS AHEGVDPDSGMGRWQYPGFIPTLMSKPAVAKWRQAVLEPRRIQKAVIAVSDEWQSPKWVN KGRELAAALEKRGVAVELSPSLPEDAAIVDWMTWLELEPQLEDFLTRRYALTGTFDLAQL LMMLTLSDRLKRDGWSRRRMVQLIKRNVFLISPYGAQIARTALPPVRDLLMPEFTGTDKA DVLIWLGAPKPVDASGWPFAALPLKADPAAKCVRGAFVIGLPGEEAAVLAGAELLESVRE EVFGAEDFHISTEPAPEDLPAARLPTDSDQTGEHQDAGAAASAQEEKTNTRLFDDLAAAD LGALAHAAWDAEKQGAKVSVLDAETGAPLTIEDFEAKLNELIETFRKAAADADDDDDASD DADNDEETPQQAQSDDAADNLIEIASPASLALAANEINAIKAAETDAERSAAAEHSGEAD AQAAEPSAAPAQPVLSAEDRAWLDAFFPGAAAKAPDLAKVGFLRRFLKEPMPDLWRPSDN QWIIAWVKFWLFRHDAKKVERAIDRIPEVHQTFETREQRVLGLFLKSDIKAAAAAAQAIE PQNAEEAAVKEWMLGMSAQRQDDDDAAIEHYQRARALSSTMTAANFPLAQALLKKYGSDH PQYQEIRKALESEAPTGLQLLLSEEERVRRASNFEKELLPALKPGVFSAELLLAPAQLVF DKKLFSEELWRAWNLAVTDRTPDDPDCFTLRIGTLEGSIRLIHERLNSTSLATAARKSPF TRSAETLLLCHAGYFAVELRGNPTEAVEAATFFAQILAALCRTAEPLGVFALESLQNRVF TLKRHSPPNTVKYPSSP >gi|319804371|gb|ADMF01000027.1| GENE 81 94096 - 94419 266 107 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRAGVSTDFGEDYIATYGLGAFSQPELEVDLGSFPTQAGAMLTFGIIERILSGHFTTEA SSVRFGVDQDNLEQRNILRAPGRVVEGEALRLVLPGEPTNDSELPQA >gi|319804371|gb|ADMF01000027.1| GENE 82 94757 - 95950 1463 397 aa, chain + ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 3 222 2 210 389 99 36.0 2e-20 MFKKTLAAAALLGAFAGSAVAADVTLYGVVDYGLQYTHVDSDKANTDAVDNFQLSSGNQS GARFGLKGSEDLGNGVKAGFHLENGFSADTGSLAQNSRLFGREARLFVNGAFGEVAFGRM GTLGSANGTYGLLGNLSPFGASWVGAVEYSTYYVGGIRADNTVTYKTPTFAGVTVYAQYS FETNTKQEENLKATEGKASANRYYALGATYKAAGFDLAAVVDSYNWSSTFTKKDADLDDG LSVTLGGSYDFEVAKVFLSGQYFDNMIGNDKSQPNSDPVDAGKSDSFYSFSSYFGNQNPI EGYALQAGVSAPVAGGTAMFAVGYTDAEEANSEADQAKVEFKRIGTSVGYTYSLSKRTNL YGVAAYYRDSVKNEGHEAGADRDPSTVTVYAGIRHTF >gi|319804371|gb|ADMF01000027.1| GENE 83 96414 - 97589 1178 391 aa, chain + ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 3 384 2 360 389 97 28.0 5e-20 MFKKSLAAVALLGAFAGSAFAADVTLYGVVDEGFLYTHKDTDVAGSDAVDKLELKSGIQA GSRWGLKGTEDLGNGLKVGFILESGFNADDGTQGVSGTMFNREASLSVMGPFGQLSLGKI GAITQGTSSWGKVGAVSAFGTSYGPANVANATNVFSAPTSVADNMIAYQTPKFAGFTVYA QYSMGNSKTKTATTATQVENKSSTDRYYALGATYANGPANLYFAVDSFNYASYFDVVTSS TPKDVKDSLTVAFGGSYDFSVVKVFAGAQYFDEVGAGTIGGLKATGVGLNDSGKLEGYAL QASVSAPLAGGTGYFGVGYLDASEADSVAAADGVDVKYYVASVGYKYDLSKRTNVYSVLS YAKGDRDWAAAGEEDTKPSTVGFGIGLRHNF >gi|319804371|gb|ADMF01000027.1| GENE 84 97602 - 97829 93 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSPLGKLFFKAIVGPHGLAADEGTAEENDLAGELQSDLNDLEKYAGCKKPAVGTQAGFQ SQIGRKLSHEQQSFG >gi|319804371|gb|ADMF01000027.1| GENE 85 97828 - 98511 866 227 aa, chain + ## HITS:1 COG:RSc3404 KEGG:ns NR:ns ## COG: RSc3404 COG0745 # Protein_GI_number: 17548121 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 1 220 1 218 221 223 62.0 3e-58 MRILLVEDDPMIADAVKSALADEAHAVDHVSSGRTALTQLGLSDYQLVLLDLGLPGLDGM SVLRTLRGEGSAKNDIPVIILTARDALEDRLNGLDAGADDYLVKPFHMSELLARMRAVMR RRNGAAANVLSNGDLSLSEAAKTVERAGQTYTLTKREYALLSALLARPGAILSRRALEDR IYAVGEEPDSNAVEYLIHALRKKLGADAVKNVRGLGWMVAGRDAKPE >gi|319804371|gb|ADMF01000027.1| GENE 86 98528 - 100153 1347 541 aa, chain + ## HITS:1 COG:RSc3403 KEGG:ns NR:ns ## COG: RSc3403 COG0642 # Protein_GI_number: 17548120 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 183 539 102 441 446 187 36.0 4e-47 MARIPRRFSAAVSQVQDKLGGFSERFTASKKPQSATESGAGDSAPESCLTSERGANPWRS AKSWFAKFFRPDNPSITLRVSLSGALVVLLFSLTSGAITFAVSYEQAQEAQDERLEEVVG MLARTKAAFSRQPPSFQAFFMDDDVFERQWLLDEDDPRAGLPAGSDVIIQTLHKNGRAVH ARFRNFLPDGYHTMTLRRHQEYRILLRTLKNGAHVIAAERTSAVFNAATANSFNLVIPLT LLSLFLGFAIGWIVWRTMRPVKTLAREIGERSGQTYAPVSECGVPNEILPLITAFNGLLK RVDALRGQEARFVADAAHELRSPLTALSLQAEALEKTNLSAEAREKVQTLRSGIDRAVRQ VSQLLALKRAQSGAAAPNAEAANAAPPHASIPQTIGKAVESVYWEAERLGITIEVEGLED LPANADPSFTMKPDDLFTILRNLLENAVRYSPKGGTVTVKLAQIEPPVLCVMDEGPGIPE EDRARVLEPFYRRLGTNVSGTGLGLAIVKTICDRWELNLTLSDARPENQEAPGLCATLKQ S >gi|319804371|gb|ADMF01000027.1| GENE 87 100328 - 100891 585 187 aa, chain + ## HITS:1 COG:no KEGG:Nmul_A0609 NR:ns ## KEGG: Nmul_A0609 # Name: not_defined # Def: phosphate-starvation-inducible E # Organism: N.multiformis # Pathway: not_defined # 65 179 4 120 149 73 36.0 2e-12 MTFPNEKTPAAASKTAAAPADAAAAHSKTGADAPAACAGCVHDDPHADRTSTPCTTATRR LADVSRTFNQWLTYGQAAALIAIAVAAIGGIGQAGWEMIAARSISLGDLLMLFLYVEILS MVKGAALGTREIPIHTPIALAIVAVARYIVVDVEHISPNYMLFTSSSILVLVLALWLIRK APNNTNS >gi|319804371|gb|ADMF01000027.1| GENE 88 101034 - 101243 364 69 aa, chain - ## HITS:1 COG:no KEGG:Ssed_1546 NR:ns ## KEGG: Ssed_1546 # Name: not_defined # Def: TOBE domain-containing protein # Organism: S.sediminis # Pathway: not_defined # 1 69 1 69 69 63 66.0 2e-09 MKISARNTLVGKIVEIHEGPVSTEVTIETAAGEKIVSSITTTSAKNLGLKVGGKAYAVIK ASSVMVAVD >gi|319804371|gb|ADMF01000027.1| GENE 89 101355 - 102158 669 267 aa, chain - ## HITS:1 COG:ECs1678 KEGG:ns NR:ns ## COG: ECs1678 COG1974 # Protein_GI_number: 15830932 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 149 259 24 131 139 103 49.0 4e-22 MGSSEISDQNDGLEGFNELEPTLPPRRKGSLRKAALEAAAEHGERDEDAPKRKRGRPKAD NPFSVVFTLRMRPSMAELCRQKGGSSFVRELVEQHLLQPRPVRCANKSTIEADGIDASLI RPEDFGQIYRPAASPARFRMKRIGMRAACGFPSPAADYESEDIDLSAWLVRKPNSTFIVE ASGDSMIDAGISDGDMLIFDRDAQPRGGDIVLALYDGNITVKRLRIVDGRPELHPENAAA RYKVICPKSTEQFEIEGVLRGLCRRYS >gi|319804371|gb|ADMF01000027.1| GENE 90 103065 - 103523 111 152 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVDVEQHAFGAAIDALPAELLKKVFAYLILKERALLILDPRDLRVLELLRIELHQLRRDA AYRQVPAHPPHERKGRFHAVPQRRREPPLGLDAVQKAWRPTAEILRPAAATKCASRLERV ADGAAPMLDDEERERMMPLLPVIPHDGGARLP >gi|319804371|gb|ADMF01000027.1| GENE 91 103320 - 104201 587 293 aa, chain + ## HITS:1 COG:all7277 KEGG:ns NR:ns ## COG: all7277 COG1403 # Protein_GI_number: 17233293 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Nostoc sp. PCC 7120 # 6 282 150 426 427 288 50.0 8e-78 MCRYLPVSGIATELVKFDSQKLQNPEVSGVEYQQGTLFKYEVREYLLEKFGRKCVYCGAE GVLLNIDHVVPRAKGGSNRVSNLVLACMSCNQKKGARSLEDFLKGKPKVLARVRRELKTL LRDAAAVNATRWVLFNELKATGLPVETGSGALTKLNRHAFGVEKEHWLDALCVGRLNGVV TRKGLNVLEIRCMGRGSRQRTRLTKYGFPRGYLMRQKCVHGFATGDMVEANVPKGKKAGL WRGRVAVRVSGSFNIQTPKGVIQGVGWKHCRLISHNDGYGYAWLGHAPHSSPA >gi|319804371|gb|ADMF01000027.1| GENE 92 104229 - 105629 858 466 aa, chain + ## HITS:1 COG:ECs1679 KEGG:ns NR:ns ## COG: ECs1679 COG0389 # Protein_GI_number: 15830933 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Escherichia coli O157:H7 # 5 441 1 421 422 294 39.0 2e-79 MTAPVFALIDCNKFYASCERVFQPELRGKPLVVLSNNDGCVVTLTAEAKALGIRRGMPAF QIAHLLKSGQCAWRSSNYELYASISRHVMKIIAGMTPAIEVYSIDECFADLSGLNEPLTD LGRRIKDRIWQWQRIPTCVGIGETKTLAKLANHLAKEWAAFGGVLNWTELAPSRREKAMS ITPASEVWGIGGRTAQKLTGMGIHSVFDFYCMDASFVRRTFGVVLERTWRELHGVPCIPL DPSSRPKLEISRSRSFGHPTSDLNQLISAVSTHLGEAARQLRRQKSLAGELTVFFQTNFF RPDLPQHNAAPTAQLPHPTADTLELTQAAANLVKAHFRRDCAYQRAGAVLQDLRPASGTV SAPTTADLLFDEADTSDTACGRLTSSELRRTELMQTIDALCRRYSCDIVKTASSSLAAGW EMRRGNLSPCFTTRIDEVWKVNYVDQREEQMDAAGERPAVRKPAAS >gi|319804371|gb|ADMF01000027.1| GENE 93 105648 - 106382 470 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 239 2 242 245 185 42 9e-46 MKVELEHLVKRFGGENVIDDVSFSVETSALALIGSSGGGKSTLLRMLGGLLPATSGSIRM DGRLVPKTERECIAFRRTLGYVFQQGNLFQHLSAQENIALVLREVHGWTKEAADARAFEL LAHFGLAEHADKHPSELSGGQQQRAAIARAVAPRPKLLLLDEPTSALDPEYTAEVLDLTA QLRGEGIEFVIVTHEMGFARRACDATAFLHQGRIVEAGPSEALFAHPQTPELQRFFGRLL EWHA >gi|319804371|gb|ADMF01000027.1| GENE 94 106372 - 107223 906 283 aa, chain - ## HITS:1 COG:Cj0940c KEGG:ns NR:ns ## COG: Cj0940c COG0765 # Protein_GI_number: 15792269 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Campylobacter jejuni # 66 278 46 258 261 177 43.0 2e-44 MGAERTRSGFNARCLWSWLLADEDEQCGQPDASDVRRHPWKEAASFAAAAALVVAFFWYS LAQIDYRPDFSFLPDFRIRIWDGFLLTIGVSAAAMVLSLLLGILSAAAKLSRVLLLRDLS SLYVVFIRGTPLIMQIYLFFYLVGTAWGVDDRFWAGVIILSVFEGAYISEIIRGSYLSID PAQIESAKAVGFTRLQQLRFVIVPQMAARTLPALAGQFASVIKDSSLLSMISVVELTQAM REVSAVNLKLVECYLFLGVLYLILTLPVALVSRLLEKRFRYEG >gi|319804371|gb|ADMF01000027.1| GENE 95 107309 - 108190 888 293 aa, chain - ## HITS:1 COG:Cj0817 KEGG:ns NR:ns ## COG: Cj0817 COG0834 # Protein_GI_number: 15792155 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 43 285 13 256 256 253 54.0 5e-67 MPLFAARRTVLSAAAAAAFLVLTGCSKSDDAKSSASSASASSADTLEKPTLVVGMELAYP PFEGKDEQGNPAGVSVDFMKDFAKSAGKEIKIENIAFDGLIPALLTGKVDMVMSSMTITD ERRKTVDFSDPYANAMLGILTHKGSGIKSVEDLNQKGRRIAAKIGSTGYLYAQNNLKNAA VTALPDESACVMEVATGKADGFIYDQLTIYRNWQKNPETTEAVFIPFQKVEPWGVAVRKG DAKLLNALNAFIADYRKQGGFDRLTEKHLKAEKAAFDQLDFKWFFDMTPAQNQ >gi|319804371|gb|ADMF01000027.1| GENE 96 108854 - 110179 614 441 aa, chain - ## HITS:1 COG:CC2735 KEGG:ns NR:ns ## COG: CC2735 COG3550 # Protein_GI_number: 16126968 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Caulobacter vibrioides # 38 413 41 408 444 79 26.0 2e-14 MMPSGSELQVLLGNVVVAQLSGDLSQPVLNWTSEWRQGGFLLAPSLPWEVNGLPPSGAAV RNFFENMLPEGTAFDHLLEYAQISRSNSIGLALHLGNDLPGAIRLRTENQLLQGHPDVFR IIAEDELDDRIGRMSAVPIDVWDGKPRLSVAGMQPKLNLLELNGHLGLCDGDRLASDRIL KFSSAARPLLLLNECMTMRLAAAAGWPTAKAGMRQVGVHQALEIMRFDRQAVAGTDGNMV VKRRHVIDGCQALGLPSAYKYERNYGDGRDVRHIREGANLLKLFGLASDADNPQAFINNL YDWVLFSIVVGNADAHAKNISFFVGPNGIRPAPWYDLLSVVLVPDVSRQLAMSVSDEFEW DQLHALQLLELADEIGRPRSWAQRRLERLLDHLAKALPQAAAAVIPQNAEESDFQQTWMK FIDERIQYWRNEASLMPKIKI >gi|319804371|gb|ADMF01000027.1| GENE 97 110160 - 110471 150 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRVFMRFDALTPQAIGEAVRLRRKALGNTLDDLAEASGISKRTLIKLEQGQDVRFSTLT TVLSWLGLSLDFSAASKKVLEAAEHDKLKDGRREEAADDAQWF >gi|319804371|gb|ADMF01000027.1| GENE 98 110641 - 111636 830 331 aa, chain - ## HITS:1 COG:alr7203 KEGG:ns NR:ns ## COG: alr7203 COG0582 # Protein_GI_number: 17233219 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Nostoc sp. PCC 7120 # 36 327 20 309 319 157 36.0 3e-38 METHFEVVSPLPNEGGRSESRQNSLLQEPLDSSGDTVNAAAAYLAELHSGDSRRAVRSRL NIAARWLGAADAFSCEWGRLRYVHVLGFMHALADKEGLAAASVNAYLSALRGVAETAWRL RQIDLTTYAEIKAVKQLRVHREPTGRALQADESQKLLAAVDEDTGPKAVRDRALIALLLG CGLRRAEVTTLRMENLERSSGTLRVIGKGNKERKVFLTPEVAQKVNAWLDLRGTEPGWLF GRLTKVGQLILTNPLDPASIGRVVKHAQDLAKIAPITTHDLRRTFATRLLAKNVDIVAVK NLMGHANVSTTAKYDRRSEEALQQAAQLAEL >gi|319804371|gb|ADMF01000027.1| GENE 99 111942 - 112568 317 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229164928|ref|ZP_04292744.1| ## NR: gi|229164928|ref|ZP_04292744.1| Tn7-like transposition protein B [Bacillus cereus R309803] # 25 203 31 208 673 63 27.0 8e-09 MDADDLNDGLLKGTVLLKKDPWIDIQYRKLTDVMLKTAKENYELIKSIISTPDLYKLNGR KRLVQAYSKGDKHLERRMNMLIGNYWRRGQSIYSLVPDYGKNTGRTSSGAKRGRKGKSDS EGASLTDELLGNMEKASIKYRESDGELTLREVYEWMCLNINKGDDDRTHSSAEQMNDKDA AADSKPELPTYHQFYYYYRTRYGTLSNK >gi|319804371|gb|ADMF01000027.1| GENE 100 112960 - 113310 452 116 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTDEILNKVANHRQKQRELEEEWGQLREQALQECLRLIETFEFSASELNFGKDGRQAKP VIKNVGAPKFQNPDGPETWTGRGKRPAWYIKAKEAGFTDEDMFIQPAAADTEAQPA >gi|319804371|gb|ADMF01000027.1| GENE 101 113371 - 114003 580 210 aa, chain + ## HITS:1 COG:RSc1760 KEGG:ns NR:ns ## COG: RSc1760 COG1335 # Protein_GI_number: 17546479 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Ralstonia solanacearum # 4 180 7 181 210 205 59.0 6e-53 MCQDALLVIDLQNDFLPGGALAVPEGDRVIEPIRGLMTLPNWRAVVLTQDWHPADHVSFA SSHPGRKPFESIALSYGRQTLWPDHCVAGSEGAAFPPHFDTSPARLILRKGMNAALDSYS AFIEADGKTPTGLDGFLKNLNIERVFVCGLALDYCVKFGVLDALQAGFETIVIPDACAAI AVGHEADILNEMRTKGARIMTASEVAARAS >gi|319804371|gb|ADMF01000027.1| GENE 102 114232 - 114537 432 101 aa, chain + ## HITS:1 COG:SMc01518 KEGG:ns NR:ns ## COG: SMc01518 COG2329 # Protein_GI_number: 15966175 # Func_class: R General function prediction only # Function: Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides # Organism: Sinorhizobium meliloti # 1 100 1 101 104 79 40.0 2e-15 MYVTMNRFKIKPEFADAYIQVWKDAGVRTKDVDGFLEFKFFRLDSKEEGYVLFSSYAVWE SKEKFLAWTKSEHFRKSHATGVANREMYVEHPHLECFDVLF >gi|319804371|gb|ADMF01000027.1| GENE 103 115260 - 115478 131 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIALLHDFLPRGAKRVLIAVAGIFGAAFSFAFVDMMPFLIWMLIFVAADFATVLYAARST STYQSSASCRRV >gi|319804371|gb|ADMF01000027.1| GENE 104 115555 - 115860 284 101 aa, chain - ## HITS:1 COG:yddM KEGG:ns NR:ns ## COG: yddM COG3093 # Protein_GI_number: 16129436 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli K12 # 1 93 26 117 120 82 40.0 2e-16 MARMFNPPHPGRMVAETLEYLGISAREFARHIGVAPSTVTRIIKEKSPITPEMAVRISAA ISGPSPEAWLAMQADYDAWQAEHSIDISHITRISEPKKNHL >gi|319804371|gb|ADMF01000027.1| GENE 105 115934 - 116140 130 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIVSWIHKGLKDFFLKRILWLAFGPRTLDVGQSACKLLIKQKSYKTTICRLIACINLRVI VQGYGRLA >gi|319804371|gb|ADMF01000027.1| GENE 106 116301 - 116879 430 192 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 4 192 398 584 584 118 37.0 1e-25 MEELRLQVQQVLDLKNANKQVPPEKWLTYKRFVCERTTAHGRRYWDRDDNAIEAALRYAG RFAIRTNAEANPFKALSIYRLRGQVEQDFNQFKNWVDGNRLRCTDTAYWGKLLVCTLATS LRMMAIKGAHDREHGNRKIPNNSIDCLFTILEQIQADKRRTANAWVTRTITKKQRDMLAL LGLENPPRVLKN >gi|319804371|gb|ADMF01000027.1| GENE 107 116934 - 117560 562 208 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSFTWEWALAIFVFLFANLFLGVQLLKLFWPLRMLKLTAKMRKEAVDPQSWLGLAADENA VRAALPIREAIFLLQKGTLSEDEMKYRKLWLRSWVYTIATLVLVYVQPQLASGSEAAMSL TLVLCQSLAAYAQGLLIKALADFRRTRIQKVLDAGARSPEKTDHGEQSESGVLNHDSKPT DADATKAESAGEPEKADREGRPEDSRRS >gi|319804371|gb|ADMF01000027.1| GENE 108 117803 - 118852 1072 349 aa, chain + ## HITS:1 COG:AF0088 KEGG:ns NR:ns ## COG: AF0088 COG0715 # Protein_GI_number: 11497708 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Archaeoglobus fulgidus # 56 338 23 291 300 102 26.0 8e-22 MPATTIKPAAPATVLSASAQTISRRRLLTAAGSAALLTAGAALTPKPVRAAAVASKTLRI AALPAIDALILYAAEADGIFKAEGLNIEILPFKSSVEMTAAIRAEKIIGQYANILGTIAQ RANGIGLSLAATTWHTSPAQRAFGFAVSPKFADQITSIEVLKGLTGVSSTRSRGTIIDWM IYRMKNAINLPEKTLDQIEVAQIPIRLQMLLTGKMQTALFYEPLLTLIESKGGRVIWDDR QLNEPLSEVALTTPYLTPDFVLPFRAALAKAAKAIDQDPQKYVPILSKKGLVPPAVANTY KLPKFSGFATPDGLPPLPTDALVQEAADWLVKVGILNQAPDITGTICRL >gi|319804371|gb|ADMF01000027.1| GENE 109 118856 - 119686 585 276 aa, chain + ## HITS:1 COG:mll8572 KEGG:ns NR:ns ## COG: mll8572 COG1116 # Protein_GI_number: 13477071 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Mesorhizobium loti # 11 262 2 257 257 170 40.0 2e-42 MTIAPEARTCAAELNVKDLAIGHNGKTLLKHLTFSVPAGSSLAIVGESGCGKSTLLTTLA GLLPALDGELSWRDAKGSAIKHPNSSFVWQQLGLLPWETVEKNLTLPLLLSQHKIPAADC AHRAAAMIEELGLSGLENRWPATLSGGQRQRLALGRALIAQPAVLFMDEPFSALDALRRE RLQDFLAGMRRRRPTTMIFVTHDIGEAAFLASDILLLGAGPSRLLEHYANPAWRSSEQCA DRDSPEFVESVYHIHNVLRQCAAHNAASYEPAGSAA >gi|319804371|gb|ADMF01000027.1| GENE 110 119686 - 120435 859 249 aa, chain + ## HITS:1 COG:AF0086 KEGG:ns NR:ns ## COG: AF0086 COG0600 # Protein_GI_number: 11497706 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Archaeoglobus fulgidus # 9 245 11 243 244 146 38.0 4e-35 MKASIFIRYFCGSVAVLLLWQLGSVTLGSDILPDPLRALGGFWDALKDPEFIGHIGLSLY RLLTALALAIAVSFPLGVLLGHSKAADWLGAPVTFITLPLPKIVLLPVFFTILGLGDSSR ILLIALATGYQILVIVRESALALNPSYELAMRSMGASTAERVLHVYIPAALPSLFMALKA ASSTAVAVLFLAESFATDAGLGWYIMNAWGLGDMDGMFVGILGMCVLGVALYAGIGLLER LACPWALQK >gi|319804371|gb|ADMF01000027.1| GENE 111 120580 - 121533 307 317 aa, chain - ## HITS:1 COG:BMEI0116 KEGG:ns NR:ns ## COG: BMEI0116 COG0583 # Protein_GI_number: 17986400 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 5 308 4 308 308 108 29.0 1e-23 MGIRNLGSLEVFVALADTQSFTEAAKRLGMTTSAASQALRALEEELAVSLISRKSRPVML TGAGRNLLDGARALLRDARELETAVTASSPILPLLRLGLAESVSCTVGADIVGALFPCTK QLSVRTAMALQLSEQFKNGDFDLLISPVSFPDMDGVTEEAVVAESFFLVTPASNTKTVST PADLLQLARDLPYFSYTTAASDKLISERILRSAGISPQRSVLVESSTTMMGLVAQGLGWA LLLPSNIWMGRDFCDDLRFTQLPFVSAQRRQYAAIRSRGFCRAAKQAVEALQNGLRKRVI PQLADIHPMLAEGMTIV >gi|319804371|gb|ADMF01000027.1| GENE 112 121591 - 121671 57 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLEQLLRNDTVVRSESISRSCETEA >gi|319804371|gb|ADMF01000027.1| GENE 113 121668 - 123032 470 454 aa, chain + ## HITS:1 COG:AGl2924 KEGG:ns NR:ns ## COG: AGl2924 COG2079 # Protein_GI_number: 15891572 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 374 15 373 448 150 33.0 4e-36 MNQPTLLSAIARWIVSADFPDLPDGEIAAARAALTDFVAVAAAGSGTSVVRNAAAYAAQN ERAGGCVQQLGRSVRFSPRTAAFLNGTAAHALDFDDVSWTTIGHPTVGIAPTALSLAVAQ GLSGRKFLTAYVVGAECAHQIARWTMPQLSEHGWHTTLANGVFGAAAAAAWLLKTDVLTT TNALAIAASLASGIRVNFGSQTKAIHAGLSNLHGMMAVELAAAGITGKDDALEASDGYAA CFAARLPREKCTVDLGCRWDLMENGLVFKQYPCCSGTHPALDVWGEWADKVHPKLEDIEA VHLGVSLLGPRELISHCPRNAVEAKFSMEFALASRLVYQRTGIEEFTDDKVLDCRIQALM KKMTMEIDPDLAKLGFIGTAPVRIRIKTKSGVVCLANDLAKGNPEKPLSESDRKAKFSSC VSPIAGSETAARWWNELTTLELLSPNQLSLLGAL >gi|319804371|gb|ADMF01000027.1| GENE 114 123070 - 124377 1229 435 aa, chain + ## HITS:1 COG:ECs5119 KEGG:ns NR:ns ## COG: ECs5119 COG2704 # Protein_GI_number: 15834373 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Escherichia coli O157:H7 # 37 435 36 433 433 264 41.0 3e-70 MHWLEILLLVGIIAYSAKLGGIGVGMAGAVGMIAATAVFGLKPGFIPVDVMLIIMTVILA ISVMQRAGGLAFMVKCAEKLLRNNPKYINALAPAVCFMLTTLGGTGYMAMSVLNVIQEVA KENNVRPAQPLTSSVIASQIACTASPISAATAAMFAVVEPMHVSFAAVLLVIITTSAFAA AICAVISSLQGKTDLSQDPIFLERMKKGLVSMQSKEEKTKPATHEAKLSVLIFLSGVSVI VLLLLFKNQIGHTLSSRDLIVMIMMFCAWLMYLFCKVDLATIKDAPIFKSGAESLIVVLG IVWFSSTIINAHLQEVKESAVALLEQYPYLLAVVFFLASSVLFSQGSTAALICPVAASLG VDAATIVGSFVACSALYITNVYPTTAFAISCDDTGSFMGRRWNGSFVINHPFFIPGCISL AAAVPFGLMLARMLL >gi|319804371|gb|ADMF01000027.1| GENE 115 124428 - 125870 1330 480 aa, chain + ## HITS:1 COG:jhp0594 KEGG:ns NR:ns ## COG: jhp0594 COG1027 # Protein_GI_number: 15611661 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Helicobacter pylori J99 # 4 462 1 460 468 363 42.0 1e-100 MTNMRIERDCLGEMEIPNDRYYGIQTIRNMKVSGAAGFPVVAYPDMHKALCQIKKACAKA NAEIGAMKPEIAQAISAACAKVIAGGYEKEFPLDMWQGGGYTCVNMNVNEVIGNLANEIL TGHKGQDMVHPNTHVNMAQSTNDTIPSATHLAIAPRLDKIVCEAEKLADAFDAKAKAFEH IVKVGRTCWQDALPVTLGQEFSGFASAIRRQARALKALRPSCFELIMGGNAVGTGLGAQP GYMEAFYKAISAELGEPVRPNLNLFDGFQNSDFILTVSGAVKTIAATLSKICKDLRLMSS GPRAGWMEINLPACAPGSSIMPGKINPTVPEMVIQIGHQVCGNDVAITMAIDEGELDLNV WDATFYKCLFENLQLVGEEIVILRRDCVEGITANESRCKEEAESSIALSTVVAATFGYPQ GVEVAHYCEKHRCNVKDAVVAMELMTQEQAEILVDPSLMANPEKMAPIVARFKKELGILI >gi|319804371|gb|ADMF01000027.1| GENE 116 125988 - 126749 601 253 aa, chain - ## HITS:1 COG:CAC0198 KEGG:ns NR:ns ## COG: CAC0198 COG2364 # Protein_GI_number: 15893491 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 10 205 4 199 227 133 37.0 3e-31 MTTIRRQRFKHIIGRTVLLIFGMFLAAFGIACTTTAGLGTTPISTVPYTASAITGLSFGT CTVILNFFFVAGQIVVLRSRYSPFNLLQIPIGFIFGAFIDLSMHLVGDVQMPNWFLAAML SLFGNLILALGTVIQIRSKTIVQPGEGFVIAIAALVKSSFGSMKIANDISLTAVAALMAL LEMGHLIGIREGTLASALMIGLFAKWIDQLINRRTVKVQPAEPHEVPLDTAVQTGIEKTA EVSMPEVKQEAVS >gi|319804371|gb|ADMF01000027.1| GENE 117 126889 - 128424 1791 511 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 26 471 26 445 484 134 28.0 6e-31 MWIISRRILSAALAAGFVCTAVCGPAIAAQKTLSTDIVIVGAGSAGLTAAVQAAEKGANV VLLEKNFFVGGASNFAEGIFAVESELNRLRSDTLTREEAFKHAREMHMYEVNVPMMRDYI YGSADNVDWFMKHGVKFDVIRMTPWEEATWHVIGEYKGKNHGAALVANLKDQCDKLGVTT LTGTPAESLITDKSGAVVGVKAKSKTDDYTINAKAVILASGSISDSNEKVAEWAHRDAKH WHSSVNVNKTGDGISMAVAAGAQRGPVSFVAHLSSEGKGIKLLSNVYTTAWQPAALWVNS DGSRFVNEDVAMSFSQAANAVYTQLGHTAWSIFDESQVDYMIEKGVDSGVGVLVPVGAKL TKLKEEIKTALDEGSDSFFAASSVSAMAKKLGVPAKNLEAAVTAYNRGCAEGHDGEFFKD VKYMRPINTKKLYAIRLTSAFFTAFGGLNVNRDFEVLNTKNQPIKGLYATGLEVSRMIGH TYTTWTSGYAFGFSCYSGRHAALNAVEKMDL >gi|319804371|gb|ADMF01000027.1| GENE 118 128537 - 128743 122 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLLGLAHSKFHFIRKGPVVERSTIRAFFCGMLLTASSALLNTQELPFKAVNKANLAVLQN EARFIRSI >gi|319804371|gb|ADMF01000027.1| GENE 119 128956 - 129744 577 262 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302860184|gb|EFL83261.1| ## NR: gi|302860184|gb|EFL83261.1| putative cyclic nucleotide-binding domain protein [Burkholderiales bacterium 1_1_47] # 1 227 1 227 230 125 32.0 4e-27 MRQVFRMRPWIFPPEPQAIQEIFVRYGVIRDFAKGAVMEHGGKGDAAQVGFLTKGLATFS CLDVQSQTHIFALLAPGRALGDLDALNPHRVAVQVDFIRPSSVLIVPRARFLESLRASVE MMEIYADLAILKQESALEGMLANFTLDLEARLRVFLLSAITSFAELQRGGWNLCPLGLTI TELSRILSADRSWVSTKVNDWIKLGDARKDGRKLYLHGRLFDSVWDWGCGNQNLRSSPEG LKAEPKPIEHYAELRRKRAGLS >gi|319804371|gb|ADMF01000027.1| GENE 120 129916 - 131760 2586 614 aa, chain - ## HITS:1 COG:no KEGG:EFER_3637 NR:ns ## KEGG: EFER_3637 # Name: not_defined # Def: putative arylsulfatase; possibly exported # Organism: E.fergusonii # Pathway: not_defined # 15 614 15 611 611 808 63.0 0 MKNITIGRRSFFLGAVAAAVSSALPATAAHASGGSSGPHVSFATQGHIGEVIVNPYSIAP LTAIIRNGGYELTEATVRIVPKPQGQEIKYKVSRSELLTHAGIPVFGLYPDYMNTVETTY TRKFHGKTEKFTDTYKIYAAPVYHEVSGSPGLHHNMFETKVTKVDAKFSDRLYLVNNLMQ QYAKATRAVWNNPMGGAMEWNFYPQNAIIDTKGEVRWYMHVEPIYNVETIYHSGVMMGFQ QDEDGNITWGYGQRYVKYDLMGREIYNRRLPVGYSDFSHSLDNAQNGHSFIRVASSDHRR ADGKRVHTVRDVIAEIDQNGKVVDEWRLWEILDPYRDNVMKVLDQGAVCLNIDASQAGKT MSAADLAKLETSDKFGDIVGTGEGRNWAHVNSVDYDPTDDSIIISSRHQSAIIKIGRDKK IKWIFSSPEGWRDGWKEKLLTPVKDGKPIACHGSTCEGDFDYTWTQHTAFRIDEKSDKHV IYVTAFDNGDARGMDQPALAEMKYSRAVVYRIDQDKKTIEQVWEYGKERGFPWYSPVTSL TKYCADKDSIMVYSATAGMGRRPSELKPGEKAGSASPFIEEFKWGETEPAVEIQLIDSMG YQAMPVSLDKAFNQ >gi|319804371|gb|ADMF01000027.1| GENE 121 132039 - 132965 676 308 aa, chain + ## HITS:1 COG:RSp0692 KEGG:ns NR:ns ## COG: RSp0692 COG0583 # Protein_GI_number: 17548913 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 305 18 318 321 102 28.0 8e-22 MLDLKINHLQLLAQIVSTGSLTEAAQNLGLSAAAASRMLKKLQTEMNDPLFIRVWRGLTP TDTTTMMLPVVRELLDQMERLEYQKSFTPAKLSATITIGAADNSVISILPPVVRAIREQA PKVNFRILPLESRQFQKLADGGMDFLLYPTQNLPDLPTHFFGLNLFRIERSVLMNRAHPL IKAYAAGQTLKPEDFRKYPRLLVKLQDSSRGAIYDVTVPDPRLGEAFIELPYFLGAPYFL EGTEYTLVLPTRTAKSFEKQFPNLAAVPYPGEYSENFARLIWHERSDKSLVMQWVRSMFA QHAGEFDR >gi|319804371|gb|ADMF01000027.1| GENE 122 133122 - 133259 58 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKESLLASCQIIPQQVSIAIEGGVHIDGLFLAAVVLMLVLIRMRR >gi|319804371|gb|ADMF01000027.1| GENE 123 133401 - 133664 139 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSVPLRVGVHYCTRTYTTAQSFLGPSYENDPCDLTPHADQHQHQDNRSEEETINMDSAL NCDRNLLWYDLTRSKGTFFHIAPCLLT >gi|319804371|gb|ADMF01000027.1| GENE 124 133764 - 134000 74 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNGRPACFQSRFVPTRITAHERIRLCSPFLGPLPLRLFPAAALLDLPEFAALLLRTLMTA ESQVISGSVVLCGASKDE >gi|319804371|gb|ADMF01000027.1| GENE 125 134447 - 135091 642 214 aa, chain + ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 16 214 1 199 206 200 55.0 2e-51 MGKVLPLYYEGALLTLRVGAIGILLALAVGMVTAVARYWRIPILNTAAVIYTEFSRNTPL LVQLFFLYFGLPKVGIRISGEWCAIIGLAFIGGSYMAEALRAGLESVSTVQTESARVLGL TPFQTMMLVVLPQAFAVSVPPLVANIIFLIKEISVVSAIALPDLMYVTKDLIGNSYKTDE SLILLVSAYVVLLLPISLLGYWLEKKVRYAGFGN >gi|319804371|gb|ADMF01000027.1| GENE 126 135072 - 135749 572 225 aa, chain + ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 224 1 224 225 242 58.0 4e-64 MQDSGINVFFQGINSLLLLKGLWTTLHISLLSAGLSIPLGILLGIFMTLKNPIARVVSRI YLEIVRIMPQLVLLFVVYFGFTRAFGWNLSAYWSAIIVFTFWGTGEMGDLVRGALISIPK TQYESAQVLGLSKLQTMRLVVLPQAVRQLIPPSINLITRMIKTTSLVVLIGIVEVLKTGQ QIIDANRFEYPTAALWVYGAVFLLYFLACWPVSLAAKALEKKWKA >gi|319804371|gb|ADMF01000027.1| GENE 127 135752 - 136519 278 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 7 220 5 219 305 111 33 2e-23 MANDIVLETRGLVKKFGDAVILNGIDFTLHDKEVAVILGPSGCGKSTFLRCLIGLEPIQV GSILLKGKPLEFGSTLRSGIGMVFQSYDLFPHLTVLENILLAPLHVAKRSREDALAQAET LLKRVKLWDKRDFYPRQLSGGQKQRAAIVRALSMNPSVMLFDEVTASLDPEMVREVLDVI VELADSGLSMVIVTHEMEFARAVADRIVFLENGHVVEENSPEAFFTTPKTKRAAEFLKTF TYTRHKRSDETPSPK >gi|319804371|gb|ADMF01000027.1| GENE 128 136649 - 137482 1178 277 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 12 277 11 279 279 254 52.0 9e-68 MSIIQNFTKKIAAVAVAAAALSAATAAVEARPLDVIKQSGEVVIGVFSDKAPFGYVDSQG KYAGYDVYFGDRLAKDLGVKVKYISVDPASRVEFLVTGKVDIILANFTVTKDRAEKVDFA LPYMKVALGVVSPESAVITDVKQLDGKTLIIAKGTTAEPYFEKNHPKVKLQKYDQYTDAY NALLDGRGDAFSTDNTEVLAWALVHKGFKVGIPSLGDLDTIAPAVQKGNKGLLDWINQEI VNLGKENFFHQDYAATLAPVYGKTSNPDDLVVEGGKL >gi|319804371|gb|ADMF01000027.1| GENE 129 138021 - 140426 1934 801 aa, chain - ## HITS:1 COG:no KEGG:JJD26997_1041 NR:ns ## KEGG: JJD26997_1041 # Name: not_defined # Def: autotransporter beta-domain-containing protein # Organism: C.jejuni_doylei # Pathway: not_defined # 122 799 403 1082 1084 135 25.0 5e-30 MKYGKLTPLAFALGMLFAGQSLAAGADTIVWDKNSALSRPSDLGKNLSIELSSGNNLWRP ADYTMNGLDKLDTTKLIWKTVTTKEGAKYSLWVSGNTVMYIDEFIDRADGVRRFGSSHAQ EASLTNSYVRETGTGDLYMYNNTIKQVSIKAGAELTQLLFEKLTFPHLGDHNTIESVENS GTIQEIQVMADGIDSNAASKIGEIKNHGKIGNISSINIGTLSSDAGSIKSITMPTFQIDK IDLKGTALGDATASRADGANGILVTGTGKIGTGQGDAITIDANSSIAGFSIESLTEADGT VKQGVIDGDINIAGKVHEIDQGTGAENLTAGIVNLGTINGALKYSGADELTLINHGTLKK TAANDQANLVLSGTGTVRVKEWYVHIDGENVTQDTAMVVNGVDHLRVDKLVMTSIQNVVT EPGDPKFNLNYAVLDANNNLKELDEFNPNEIARPKEVEFSDELKDYGLGGRYEQNTGWYR AGVDVDRTGSSVLGQTLVNQLARRQVFVDASLADVYASSLYHQREYGQEQMWFVKPYFAQ EKSSLMGGATVKGHTTGVMAGGSKKLEDNKFSVFLGYESYEGTSHNLDLDMDTLYVGGNY IRSFAQADTHDFYGKADLLGAYSSTKLARTLPEMQASGTAHTLAYNAAVHVGMNYYLPQQ SVLSPEIGLGVMGGRTGAFDVDGSQAQSLEERFDATHVNIGYGDISLKWHQNWEPVLGTS LIKTLMAGGVRYNFNHSMDVGANIAGIWGSDSVDLPRTYQYFNTSLILEFNKHTSITFGY VGIYDSTGHSHNATAKFAYAF >gi|319804371|gb|ADMF01000027.1| GENE 130 140553 - 143408 2068 951 aa, chain - ## HITS:1 COG:no KEGG:Dvul_2968 NR:ns ## KEGG: Dvul_2968 # Name: not_defined # Def: outer membrane autotransporter # Organism: D.vulgaris_DP4 # Pathway: not_defined # 724 951 492 721 721 78 27.0 1e-12 MKYGKLTPLALAVGLALISQVVQAAETNGSTIKATSTNYTKPFNNATDTYTSNDTELETV LGVNGRTLTVKGNDLTLINSYSGNDQTSSVINAEAGTVKFTGTKLTLKKDLPSTLTANTG NQAFIRIVPRFSTVPAGTVTFDTAVRMEGSVPYGMLLKGTATFNQGYDMVIDRTGMAGLN DVRGVFLQAGGSLHVTGQPISMTITAGEKDTFLQGMTLSDGDELSTKALTMTLTGNKLLM DFRGIVDIGKTEGRTTAKIDGPLSVTMKTGDRAVGLDLQGNRNNFVIGGDTTVNISDVAT VFGLNTTETVDFQGNVNMTLGATGNSWGIFADSQTADVKLKNAVIKFTGTDTTVDQTAIH LSDQARLEADSLETNGKQALFAGGGSSINVKGGLIAFERESAIDAAGDGSSIVVNADGKG KVQFWGSTGIVGNSTLEMTVGSGADEDSYWSVSQESRLTKLSVASNAALNFLVTPDMVNS LTNKAIVTSTGTDPVLLHSDSKIALAGTGFDLDQGLNIPLIYSDAGIALDTLNNLLKADR KLPDALKTDLTLERLKSQARIETNQLSKDKYDLLMDADAKTLVAEFAPQQNPDPDKPNPD PDKPGTDPDQPGTNPDNPGTNPDNPGTNPDNPGTNPGQPGTTERVNEQTDSLMQSSLAAA STLFAADELLIDSTIKSRQGVRQTGPFAAAKVGKYDLDVPGSADSTVISGLLGYAFNVQG SEVGGFMEMGHGTYDTKTADVGSPFGVAAGDGKHNYVGFGVYGNYATPVDWLHVTGYLKG GWLRSEYAVALGGVDEDFDRTSNYWGAHLGVYGEFAVADKFKNRTFLNYFYDGREGENYR SNAGVEYHLDSLNTHRAQVGTVFEYAATPTVRPYAAVTYEYAFKAEAKGKFTDQDGTMNL NAADLEGSTGIASVGLTYQNDAKSFEFDVGLNGYVGKRQGVSAQAQAAWKF >gi|319804371|gb|ADMF01000027.1| GENE 131 143781 - 144087 226 102 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESS Prediction of potential genes in microbial genomes Time: Sun May 29 20:05:34 2011 Seq name: gi|319804309|gb|ADMF01000028.1| Sutterella wadsworthensis 3_1_45B cont1.28, whole genome shotgun sequence Length of sequence - 62651 bp Number of predicted genes - 61, with homology - 47 Number of transcription units - 33, operones - 14 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 374 224 ## - Prom 394 - 453 6.1 + Prom 474 - 533 3.9 2 2 Tu 1 . + CDS 576 - 857 64 ## 3 3 Tu 1 . + CDS 2226 - 3287 165 ## + Term 3313 - 3357 0.5 + Prom 3327 - 3386 6.9 4 4 Op 1 . + CDS 3515 - 3787 227 ## 5 4 Op 2 . + CDS 3787 - 4113 215 ## + Term 4335 - 4378 1.0 6 5 Tu 1 . - CDS 4007 - 4219 83 ## 7 6 Tu 1 . + CDS 4556 - 4948 286 ## - Term 4959 - 4994 4.0 8 7 Tu 1 . - CDS 5028 - 5339 91 ## 9 8 Tu 1 . + CDS 5333 - 6334 486 ## COG4643 Uncharacterized protein conserved in bacteria 10 9 Op 1 . + CDS 6736 - 8340 884 ## COG5519 Superfamily II helicase and inactivated derivatives + Term 8355 - 8395 10.2 + Prom 8381 - 8440 1.7 11 9 Op 2 . + CDS 8502 - 8708 258 ## + Term 8729 - 8769 10.2 + Prom 8755 - 8814 1.7 12 10 Tu 1 . + CDS 8876 - 8977 87 ## + Term 9201 - 9238 3.3 + Prom 9033 - 9092 2.8 13 11 Op 1 3/0.000 + CDS 9252 - 9671 317 ## COG3536 Uncharacterized protein conserved in bacteria 14 11 Op 2 1/0.000 + CDS 9695 - 10459 412 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 15 11 Op 3 . + CDS 10543 - 11535 736 ## COG4395 Uncharacterized protein conserved in bacteria + Term 11630 - 11677 9.4 + Prom 11597 - 11656 10.1 16 12 Tu 1 . + CDS 11821 - 13332 1061 ## COG0591 Na+/proline symporter + Term 13363 - 13403 10.9 + Prom 13350 - 13409 2.1 17 13 Op 1 9/0.000 + CDS 13433 - 14797 812 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 18 13 Op 2 . + CDS 14819 - 16639 865 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 16657 - 16710 8.0 19 14 Tu 1 . - CDS 16713 - 17360 471 ## COG2095 Multiple antibiotic transporter - Prom 17463 - 17522 3.2 + Prom 17502 - 17561 3.0 20 15 Op 1 27/0.000 + CDS 17612 - 18835 979 ## COG0845 Membrane-fusion protein 21 15 Op 2 9/0.000 + CDS 18854 - 22009 2425 ## COG0841 Cation/multidrug efflux pump + Prom 22014 - 22073 1.7 22 15 Op 3 . + CDS 22104 - 23531 535 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 23 15 Op 4 . + CDS 23528 - 24217 388 ## AZL_025900 HTH-type transcriptional regulator + Term 24239 - 24284 12.3 - Term 24227 - 24272 8.5 24 16 Op 1 7/0.000 - CDS 24305 - 25729 1153 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 25830 - 25889 2.4 - Term 25751 - 25796 -0.3 25 16 Op 2 40/0.000 - CDS 25911 - 27257 581 ## COG0642 Signal transduction histidine kinase 26 16 Op 3 . - CDS 27272 - 27928 568 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 27 16 Op 4 . - CDS 27925 - 28473 501 ## - Prom 28522 - 28581 1.9 28 17 Op 1 . + CDS 28522 - 29034 302 ## COG3671 Predicted membrane protein 29 17 Op 2 . + CDS 29079 - 29636 389 ## COG4681 Uncharacterized protein conserved in bacteria + Term 29650 - 29690 9.6 - Term 29638 - 29677 9.4 30 18 Op 1 . - CDS 29692 - 30084 306 ## COG2346 Truncated hemoglobins 31 18 Op 2 . - CDS 30097 - 30390 208 ## gi|302859907|gb|EFL82984.1| putative cyd operon protein YbgE + Prom 30043 - 30102 3.0 32 19 Tu 1 . + CDS 30335 - 30532 147 ## 33 20 Op 1 31/0.000 - CDS 30540 - 31679 1174 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 34 20 Op 2 . - CDS 31700 - 33250 1642 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 35 20 Op 3 . - CDS 33300 - 33506 125 ## - Prom 33668 - 33727 4.3 + Prom 33608 - 33667 2.4 36 21 Op 1 . + CDS 33695 - 34978 717 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 37 21 Op 2 . + CDS 34975 - 35886 136 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 35902 - 35939 6.7 - Term 35888 - 35927 7.1 38 22 Tu 1 . - CDS 35954 - 36472 484 ## gi|302859911|gb|EFL82988.1| arylesterase-related protein - Prom 36536 - 36595 4.9 - Term 36485 - 36534 9.6 39 23 Tu 1 . - CDS 36608 - 37105 273 ## Bcenmc03_4854 hypothetical protein - Prom 37134 - 37193 2.8 40 24 Op 1 4/0.000 + CDS 37532 - 38110 405 ## COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 41 24 Op 2 23/0.000 + CDS 38103 - 39368 982 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 42 24 Op 3 . + CDS 39371 - 40435 613 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 43 24 Op 4 . + CDS 40461 - 42098 808 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 42128 - 42176 14.0 + Prom 42102 - 42161 1.6 44 25 Op 1 8/0.000 + CDS 42182 - 43984 593 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 45 25 Op 2 . + CDS 43981 - 44661 333 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 44699 - 44736 -0.9 - Term 44638 - 44687 8.1 46 26 Op 1 4/0.000 - CDS 44732 - 45082 369 ## COG3043 Nitrate reductase cytochrome c-type subunit 47 26 Op 2 7/0.000 - CDS 45079 - 45951 489 ## COG0348 Polyferredoxin 48 26 Op 3 10/0.000 - CDS 45948 - 46748 237 ## COG1145 Ferredoxin 49 26 Op 4 . - CDS 46752 - 49496 1905 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Term 49538 - 49568 0.4 50 26 Op 5 . - CDS 49573 - 49809 278 ## gi|302860148|gb|EFL83225.1| NapD protein 51 27 Tu 1 . - CDS 49948 - 51168 777 ## COG0477 Permeases of the major facilitator superfamily - Prom 51257 - 51316 3.4 + Prom 51245 - 51304 4.3 52 28 Tu 1 . + CDS 51482 - 52723 950 ## COG3633 Na+/serine symporter + Term 52777 - 52830 12.3 + Prom 52781 - 52840 4.0 53 29 Tu 1 . + CDS 52871 - 54700 1074 ## COG0514 Superfamily II DNA helicase 54 30 Op 1 2/0.000 - CDS 54705 - 55478 377 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 - Term 55502 - 55543 8.2 55 30 Op 2 . - CDS 55562 - 56203 615 ## COG0526 Thiol-disulfide isomerase and thioredoxins 56 30 Op 3 . - CDS 56257 - 56802 383 ## gi|302859919|gb|EFL82996.1| sporulation related protein 57 30 Op 4 . - CDS 56820 - 58580 1435 ## COG0018 Arginyl-tRNA synthetase 58 30 Op 5 . - CDS 58614 - 59420 578 ## COG1469 Uncharacterized conserved protein - Prom 59643 - 59702 4.7 + Prom 59591 - 59650 3.2 59 31 Tu 1 . + CDS 59712 - 60137 300 ## + Term 60152 - 60190 6.6 - Term 60145 - 60172 1.5 60 32 Tu 1 . - CDS 60181 - 61647 522 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 61797 - 61856 80.3 + TRNA 61771 - 61856 72.8 # Tyr GTA 0 0 + TRNA 61924 - 61997 79.0 # Gly TCC 0 0 + TRNA 62005 - 62079 85.2 # Thr GGT 0 0 61 33 Tu 1 . + CDS 62143 - 62649 678 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|319804309|gb|ADMF01000028.1| GENE 1 2 - 374 224 124 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVHRAYPNGGTSEKLLSVS QYLV >gi|319804309|gb|ADMF01000028.1| GENE 2 576 - 857 64 93 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTGAEPGKLILSWEFWEFWERLLPVRFTGNSVLGILGIFRKHIATCIVATWKERNCLIL LYITVGGLSLASEAAAGMNLPNARDGKARSVVR >gi|319804309|gb|ADMF01000028.1| GENE 3 2226 - 3287 165 353 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKYAEAFFKQANDSGEQKTISPFDRLTLEGAKTWLNRDKWTVKEAASLLCGIDPSALAI TDYYPWPEDLSDDARKMVREGERVLVYLENAIDRISSNSAVCFPTLNGFATKYRDDGNFY NDRGEFEFPIRAYFVSALSIANNDGMGIDIPCFGIFHDEEKEIEAVRLRGDTSAVYEPIL PELFSLLRNRSILQSKDLNVSEWPRTSIDEGEDCECVADGTKPIPTYDDWRQLVEQTPAP NVDEALNACMPDAPEAVKSVLVASTACIPSGAPLTIDHIRALLDQEHPRYQPELAAAVET WCSFEVDPMVKDRTPKDEIKSRLKDWDKGKPLSTTALKRIAIVVNWEKTPAKN >gi|319804309|gb|ADMF01000028.1| GENE 4 3515 - 3787 227 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEHKVSAHIQAEPAEIPDSMKADLDRFAGRFVLSAADGCKALGISKTKWLELRKTDPTFP RPIRIGAAVRYRVADLIDWTNSQANISEVA >gi|319804309|gb|ADMF01000028.1| GENE 5 3787 - 4113 215 108 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKPRSIPTVDDTVIRHVQIADGICRLSLFSWARANGLKYAGVTRSFHRLMLRIPSLSEHV ESVRRANIYSGPIFKDYLLDAVACLVWLYWRENGRRLPWVLLEGTAHA >gi|319804309|gb|ADMF01000028.1| GENE 6 4007 - 4219 83 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGVMLMSEAGFRGAIVRRLSTDTNESTINGLFWFVIKHEPSPLIKPREGACRSHANRAKQ GKLQRLASSL >gi|319804309|gb|ADMF01000028.1| GENE 7 4556 - 4948 286 130 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADQSSPARCAEALAHHTFKSSDFLKGSDFAANRSLGFILDALSSNDPEGVDAIDSDLRA LVNDVADGMNYIASVLEAPADASQKVDSLSPEQSRGLGAIVGLLADTLLLVSAASVQRED ARAHLLKNRG >gi|319804309|gb|ADMF01000028.1| GENE 8 5028 - 5339 91 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSPSLLTQRELGYGMHRMESVGNVLKLLHERVHMRFCGRYGGRFGASLGAELHQHSTQC RHLNIKTPQAWSHRNNCGEVLRETCVDAVNQCKPFDSIEVNGA >gi|319804309|gb|ADMF01000028.1| GENE 9 5333 - 6334 486 333 aa, chain + ## HITS:1 COG:RSc2483_1 KEGG:ns NR:ns ## COG: RSc2483_1 COG4643 # Protein_GI_number: 17547202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 36 329 34 292 359 66 29.0 8e-11 MAQKLYSTPLDACTAAGVEYPSRGLLPGPWNVSKAFDGKRWKQGAGRVRMFSDGNGGVVW NWITGEAALWFDDAGKKLTKAERDSLMKRAVMERRKWNEEQARRWAEVAAFASQLLKQAA PVIEHPYLNRKHIKAVSGLFVMDAVDINREFERFYQETPRRLMDCKTHQPMTGSVLMVPL YRSVHATVPSSIECISENGGKYALPEAQAKGAFWLPESVRLSNQSVGRIGIAEGIATALS ISQVLGFPCVAARYCGNLSAVAQTLRNYFPGAHIEVCGDRGNGEEDARRAAEAVGGKLRI PSFSSVLIQKFKAITGGNQPTDWNDLFIAAEEL >gi|319804309|gb|ADMF01000028.1| GENE 10 6736 - 8340 884 534 aa, chain + ## HITS:1 COG:STM2745 KEGG:ns NR:ns ## COG: STM2745 COG5519 # Protein_GI_number: 16766057 # Func_class: L Replication, recombination and repair # Function: Superfamily II helicase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 5 425 192 598 689 149 30.0 1e-35 MKSPAQVVAYLADNGLEIRHAINSQGGSAYIVNFLNRFPVRARVLGVDHHGWVNHGEAFS IPRLGIIGKSETSGIIYTGDPKSEPVYAEKETLTDWQEKIGKPAMFSSRIGFAICLGFAA PLLEFTSEESGGFHFYGESSKGKSTCARALCSLWGPANERGEMGTWRTTDNGLESAAAAH THLPLILDEIGQASPALLASIIYMLRNERGKGRATKGLEARRVLTWRLLFLSTGEETIED YAAKAPGKKGALKEGVKMRMADIPAAAGGPEFGVFDGEFDPTKTKDERLALAAQYANQIN TASKSEAYGTAGPAFIRALIAHIVAIGVSQFESNLREQMSDWVNKHCGTKDTQIVRVARR CALIAKAGELAIRFGVLPWTAGMPSEFAAKCFKAWRAEYKTAEMQDRERVLYVVEKISAN RGRFALQRPGSETLIQAASALPCMGVLKVTIEDIPTEAFINRTLFDAEFCPVGDVPKVVL SALAKQGLLKQNDRSHPHMFKASGPIGKMIAPHLSGARCVYVVMPVVESSGNSA >gi|319804309|gb|ADMF01000028.1| GENE 11 8502 - 8708 258 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSLRQVCLDKGIHMIEEQKMKPPAGFERLEAVQEAYEERAAILEFDAGMSREEAEKEAR KITGYEGW >gi|319804309|gb|ADMF01000028.1| GENE 12 8876 - 8977 87 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSLRQVCSEALEMGISWLVVKIDDSHHEHVDD >gi|319804309|gb|ADMF01000028.1| GENE 13 9252 - 9671 317 139 aa, chain + ## HITS:1 COG:RSc0457 KEGG:ns NR:ns ## COG: RSc0457 COG3536 # Protein_GI_number: 17545176 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 4 116 11 123 138 134 53.0 7e-32 MKVPVQVLVHQKTRTLELIYQNNARAVFPFEFLRVFSPSAEVQGHSPDEAVLQVGKAEVG LKGVEPVGQYALRLLYDDGHDSGVYSWDYFEKLDHERDVLWQKYLEELEKVGASRDPHDP RNAPFVTKNRPPHGGCGHA >gi|319804309|gb|ADMF01000028.1| GENE 14 9695 - 10459 412 254 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 35 253 1 221 221 163 40 2e-39 MTDKSKKNVSEAEKQIDFGFTKVEEAKKEEKVREVFDSVAPKYDLMNDILSFGMHRGWKH RCIREAEVTRGMKLLDIASGTCDLAIAFAHRTNAENITATDINYEMLSYGRQRLEQLGLN CQVIQADAEHLPFEDNAFDRVTVSFGIRNMTHKDRALAEMLRVLKPGGKLLVLEFSKCAP LLKPFYDFYSFHFMPWLGGKIAGDADSYRYLAESIRMHPDQPTFANLMRSVGFSRVKWHN LTFGVCALHIGIKP >gi|319804309|gb|ADMF01000028.1| GENE 15 10543 - 11535 736 330 aa, chain + ## HITS:1 COG:RSc0459 KEGG:ns NR:ns ## COG: RSc0459 COG4395 # Protein_GI_number: 17545178 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 2 323 8 354 356 103 32.0 3e-22 MKNLIAALVVCVALATTSFDADAAKRFGGGASFGKAAPTFSQRAPTAAPAAPSAQPRANQ AQPKAAPAPTPAQKPSMMRSVLGGIAAALGITALLSLLGINGAGISSLITGLLLAVVVFF VVRMFLMRRRPQTAGGPAGSNPFDQQRQTDMEQTMQRESNSAPQQNWQQSQGGVRSGSLM DQLMGGAASESSSTAESSGLVDVTPVDFDREGFLKTARDNYLKLQQAWDTGNVIEISDFT SNEIFTAVTHQLRERKGEVYHTEVKSLENELLGIAQQDGTYYASVRFFGSLVVSGEPETF DEIWVLEKPVTGTGGWLLCAIRQNESSAQA >gi|319804309|gb|ADMF01000028.1| GENE 16 11821 - 13332 1061 503 aa, chain + ## HITS:1 COG:RSc0463 KEGG:ns NR:ns ## COG: RSc0463 COG0591 # Protein_GI_number: 17545182 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Ralstonia solanacearum # 3 464 2 463 479 387 48.0 1e-107 MTLTGFVLLYIAATIAIGVIAATRVKNTSDFALAGRSLPLPMVITATFATWFGSETILGL PGRFIESGIAGVIEEPFGSGMALILVGTFFAHKLYKQNILTLGDYYRDRYGRSVELLCSV AIVISYLGWVGAQVTALGLVINLITEGAVSMTTGMVIGAAVVLAYTMVGGMWSVAMTDFV QMIVIVVGLVAILWFATDLAGGMDKVVDYARGRDLFHAFPEPTTTGWLFWISAAMTMMIG SIPQQDVFQRVMSAKNLPTAVAGPILGGSFYILFAFVPMFIVVAAILVMPDAAEKMLSED PQQLLPTLVRDYMPMWLRVVFFGAVLSAVMSTASATMLAPSTIFVENVLRHFMKIDDRNM LRAMRLSVAVFAVCVLSYSIALEGAAIYDMVAMAYQFPVVGAFWPLVCGLYWKKATRQGC YISIFLGSVVWVVLTWSALGEVFPNVLGGFIAAGFGMVVGSLLPTADNKKFLAERHRNLM SRPVDAEVGRGRLPAVVTASASI >gi|319804309|gb|ADMF01000028.1| GENE 17 13433 - 14797 812 454 aa, chain + ## HITS:1 COG:RSc0177 KEGG:ns NR:ns ## COG: RSc0177 COG1207 # Protein_GI_number: 17544896 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Ralstonia solanacearum # 1 453 1 451 455 511 58.0 1e-144 MNVVVLAAGKGKRMHSSLPKVLQALAGRPLLDHVLDATADLADHPRVVVIGHAAGIVRKH YEGRTDIVFALQQEQLGTGHALMQALAAINPEDPMTLVCLGDVPLLSPKTLMTMAEAGAD GSLVLLTVELSDPTGYGRILRNASGAVVSIVEEKDASSEEKRICEVNTGIMCLPTAHLAD WLSRLKNQNAQGEYYLTDVIGLAFNDGVSITTVHPEHAWEVEGINSKSQLARLERVWQRV QAKRLLEAGVTIIDPDRFDLRGELICGQDVEIDVNVVFEGRVVIGSNVKIGANCVIKDAQ IADGVQILPFCHIDGASVGTGSRVGPYSRLRPGAKLLGENHIGNFVEVKKSVVGLSSKVN HLTYIGDASIGERVNIGAGTITCNYDGVNKFRTEIGDDAFIGSGTELVAPVLVGAGATVG AGTTVTRSVPAGKLVVGRARQIVVEGWTRPVKKN >gi|319804309|gb|ADMF01000028.1| GENE 18 14819 - 16639 865 606 aa, chain + ## HITS:1 COG:RSc0178 KEGG:ns NR:ns ## COG: RSc0178 COG0449 # Protein_GI_number: 17544897 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Ralstonia solanacearum # 1 606 1 612 612 779 66.0 0 MCGIVAAAARRNVVPLLIEGLRRLEYRGYDSCGIATVGDDGLRRARSTQRVAELARQAKE LNAPTGIAHTRWATHGAPEVCNAHPHFSRGLIGLVHNGIIENYESIRERLKNLGYDFTSQ TDTEVIAHLIHSNYQGDLLEAVKKSVLELAGSYAIAVICKDEPHRVVLARQGSPLVVGLG NGEMFAASDAMAVAGITDRILYLAEGDVCEITPDAVDVFARNGSEFISVERPVRTVQAYS HAVDLGPYRHYMQKEIFEQPRAISDTLEGVAGITPKLFGSEAETVFTGVKRLLFLACGTS YYAALTAKYWIEAIAGLHCDVEIASEYRYRISVPDPDTLVITISQSGETADTLAALRHAA ELGMTKSLTICNVATSAMVRESRLAYVTRAGVEVGVASTKAFTTQLTAIYLLALTLAKLN GRLTPEDEERELKALRHVPAALGAVLALEPQVIDWAERFARKEHALFLGRGMHYPIALEG ALKLKEISYIHAEAYPAGELKHGPLALVDEDMPVVTVAPNDRLLEKLKSNMQEVRARGGE LYVFADGDSNITSEERVHVIRLPENYGMLSPILHVVPLQLLAYHAALVCGTDVDKPRNLA KSVTVE >gi|319804309|gb|ADMF01000028.1| GENE 19 16713 - 17360 471 215 aa, chain - ## HITS:1 COG:STM1521 KEGG:ns NR:ns ## COG: STM1521 COG2095 # Protein_GI_number: 16764866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Multiple antibiotic transporter # Organism: Salmonella typhimurium LT2 # 22 212 20 217 221 115 36.0 6e-26 MFEALHFQYFLGGLVSLITITNPPSKMPLFISLTQGMSEERRRQQANWAGIYAAAIMLVS LVCGNVLLAFFGISYGAMRIAGGLVVAAIGYQMLFGGNSPNKAPIVRRDREDYAFFPIAM PGIAGPGTIAVVIGFSTEIAELPGYIDMAIAFAWTALAILCATSLSWFIMRYSDVISNRL GPSGTLVIGKLMGFLLICIGVQFVGSGIRTFIAGG >gi|319804309|gb|ADMF01000028.1| GENE 20 17612 - 18835 979 407 aa, chain + ## HITS:1 COG:YPO3132 KEGG:ns NR:ns ## COG: YPO3132 COG0845 # Protein_GI_number: 16123294 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 24 405 14 388 395 313 48.0 6e-85 MDQSSRVELRMLLKQKTLHAAIGLALSAVVLLTGCEKNTFVSSAIAAEHQMPPQEVVVVT AKAEPLHIATVLTGRTNSYTVAEVRPQVNGILQKRLFKEGQEVKAGDPLYQIDPAIYEAQ LKSSEASLAQARAQLTQATADAKRSRELVKTNAVSKQSDDAAQAAMKTAQAAVKAAEAAV LTAKINLDYTKVRSPISGRVSRSEFTEGALLSAYQTTALTTVQQLDPIYVDVTQTADDML RIQREIAAGTLKTDTQGAAEVELILSDGSKYAQKGKLTFTDVQVDESTGSVRLRAEFANP DRLLLPGMFVRANLVEGLRPDGILVHMQSVMRDTRGNTYVYVVDKDNKVERRNIVATQTQ GTFWIVDSGIQAGDRVIFEGFQRTAPGAVVTPKEYDPKSAPEGKPLF >gi|319804309|gb|ADMF01000028.1| GENE 21 18854 - 22009 2425 1051 aa, chain + ## HITS:1 COG:PA0426 KEGG:ns NR:ns ## COG: PA0426 COG0841 # Protein_GI_number: 15595623 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 3 1034 2 1030 1046 1162 57.0 0 MFSRFFIDRPVFSWVIAIIIMLAGILSISTLPVSQYPQIAPPQVSITATYPGASASTIEN TVTQVIEQNLTGLDGYLYMQSTSDSAGRVSITVTFETGTNPDMAQVQVQNKISTALTSLP QVVQQLGVTIQKTSANFLMVVGFVSKDPSIKTADLGDFLTSNIQEPLARVSGVGEAQVFG ASYAMRVWLDPDKLVKYKLNPSDITSAISAQNMQVSTGSLAAQPTDGKQEFTATISSSSL LETPEDFRNILLKVTEEGANVYLRDVAEVKLDQKDYIALGTFNGYAASGMAIKLASGSNA LETQAAVLKRVEELKSLMPQGVEVVVPFDTTPFVRAALHEVVKTLIEAIILVVCVMFLFL QNWRATIIPTIAVPVVLLGTFGMLAATGFSINMLTMFAMVLAIGLLVDDAIVVVENVERV MREDGTDPHTATVKSMGQITGALVGIAMVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMV LSVIIALTLTPSLCAKILKPIDHDEHMGKGGFFGWFNRGFEALTFAVRDGVGGFIHHPLL LVVCYALVVGGMVWGFLKTPTAFMPGEDQGVALMQVQLPQGATMERTDHEVTRIQKFLEK TESRDIDSFFTVRGFSFAGSGQNMALGFVKLKDWSARPNDDQSVLAIQRRTMGAFMMSPE FKNASTFLFPLPAVPELGVADGFDFYIQDEKGAGHAKMMELRNKFLAAANQDPRLTMVRH NGMDDTAQMHLKLDNEKLSAYGLDIATVNSALSTALAGSYVNDFLDRGRIKEVWVQGVPS SRMQPVDLNRWHIRNSKGEMVPLSTIAEVEWNYSSPRLERFNGLAALNIQGSPAAGVSSG EAMQAIEEIAAKVFPEGYSIAWNGVSYQERQAGSQEAALYAISLLVVFLCLAALYESWSV PIAVLLVIPCGIVGALGLTLFLGMNNDVYFKVGMLTTMGLVSKNAILIVEFAKDLVAAGE DVVKAALHAVELRLRPILMTSLAFGLGVLPLAIAHGAGSGAQNAIGVGVLGGMITGTILC VALVPAFFVFVTRIAHRISGGPNAPVKTVQA >gi|319804309|gb|ADMF01000028.1| GENE 22 22104 - 23531 535 475 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 10 460 8 455 460 210 31 1e-53 MKKMLSLMPLAAALALAGCVNLAPDYERPEAPVAQAWPEGESYANSELKREELPKWQNFI QDDRLKKVIELALSNNRDLRIAALNVEKARALYGVQRADLFPTVAAAASNATTHRESTDS TTHAYSADLAMASYEIDFFGRVRNLTEQALQSYLQSEDAQRTTQGTLVSEVTLAWLTLGA NREQLALQKETLASQEESFRLVGESYKYGAASRLDYEQARTTVASARAAITTYVRAVAQS QNALELLVGSKVPDELQPSGVELAATLPATMPAGLPSEVLLNRPDIISAERGMISANANI GAARAAFFPSISLTANAGSASAHLSDLFGANTGLWSFTPSISIPIFTGGRNLANLRSAEV QEKIAVATYEKSIQTAFQEVADALATEGTVERELKERREFADAASQAFELSSARYKHGAA AYTEVLDAQRTKVSAQQAVITAELSRASSLVTLYKVLGGGTELPEPAKTIEGAEK >gi|319804309|gb|ADMF01000028.1| GENE 23 23528 - 24217 388 229 aa, chain + ## HITS:1 COG:no KEGG:AZL_025900 NR:ns ## KEGG: AZL_025900 # Name: not_defined # Def: HTH-type transcriptional regulator # Organism: Azospirillum_B510 # Pathway: not_defined # 1 204 2 205 209 84 24.0 4e-15 MSPVADQERTERLAEQHRREIVDAAERLVKGNGLHQLKLRDIAKESGKSLGNLYNYFQNK EAIIEALVEREKSRFLMVVSQKIEPLPGEDYKSMLRRHLEQMADAYLDPDSLLLAISVAG EALVNPGVHKIMVAANRRIVEHVVALIHQDPSCSMDNVPRELLEARVICIRTFFESLRGA VAFYPDVNREMLKQVTIERLLLIWMWECSKALGMSLEAFEKSMASDYCP >gi|319804309|gb|ADMF01000028.1| GENE 24 24305 - 25729 1153 474 aa, chain - ## HITS:1 COG:RSp1552 KEGG:ns NR:ns ## COG: RSp1552 COG0265 # Protein_GI_number: 17549771 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Ralstonia solanacearum # 45 469 59 487 490 374 50.0 1e-103 MQILSKTSLAAALCAAFALTSAALPVQATESSTPTQQQTQGQLPDFVKLVEDNGAGVVNI SVTKNARTVAVPNFGFPGMDEQGAEIFRRFGFPMPFGGGEQEIPEQRGTGSGFIISTDGL ILTNAHVVEGADKIVVRLTDKREFEGKVLGTDKQTDIAVVKIEAKDLPALKMGDSNQLKV GEWVAAIGSPFGLDNTVTAGIVSALSRNLPTDQYMPFIQTDVAVNPGNSGGPLFNMKGEV VGINSQIFSTSGGFMGLSFAIPIDIALQVKDQLVKDGKVTRGYVGVYIQQVTQDLAESFG LKTPEGALVTKIEKGSPAEKAGLKAGDVITALNDRKVTSSSSLPMLVSSLRPGTKAELTV IRDKKEIKLDITIGTNSAADNSASSADTHRLGIEARVLTDAESKDAETTGLLITKVSKFA QQSGLMAGDIIVSANGKLMKSASDLREACRSDQVLLLVQRDGGRIFIPVRFPKK >gi|319804309|gb|ADMF01000028.1| GENE 25 25911 - 27257 581 448 aa, chain - ## HITS:1 COG:RSp1553 KEGG:ns NR:ns ## COG: RSp1553 COG0642 # Protein_GI_number: 17549772 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 1 437 1 433 438 251 39.0 2e-66 MTSIRRKLLFTLLAALLAAGFSAAAATFFSAQAEFNDFLDAHLRETAESLADSVRSSMPM HAPEHLTIIGDAPSYRIIVQVYDSANNSLWQRENTPALPLPDGPGFGLSKVDGRDWRTYS VAVGPLVITAGQDLAVRTSLAATASFRILQPLCLLLPFIAIAVWIVVGSGLAPLERTARS IARRSPTSLQPISTKGLSSELASLVNAINSLLARLGESLSAQQRFASDAAHELRTPLTAL KLQVQLAQRAKTPEAQDKCFARLNEGINRATRLVQQLLTLARLDPDASKKPMSTIHLDAL IASIRDDMAPIAEQKDIIITASASPAQIDGMEDAIRLMITNLTDNAIRYTPQGGRIELSS SIVNGRSVVRVSDNGPGIAPDERARVFDRFYRALGTKTSGTGLGLAIVKRIVDIHHGTVT IEDGLDGRGTSFVLSFPPLGASCPEESV >gi|319804309|gb|ADMF01000028.1| GENE 26 27272 - 27928 568 218 aa, chain - ## HITS:1 COG:RSp1554 KEGG:ns NR:ns ## COG: RSp1554 COG0745 # Protein_GI_number: 17549773 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 1 216 4 228 246 240 54.0 2e-63 MRILLVEDDDMIGESVMAGLETEGHAIDWVRDGNSALLALNTTPYSLVILDLGLPGKDGL QVLKEMRGRRDPTPVLVTTARDTVDDRIKGLDSGADDYLIKPYDLDELSARIRALLRRSA GRADPVIERGELKISPATREVTYKGEPVILSSKEYALLAALAERKGVVWSRAQLEEKLYN WDNTVGSNAIEVHIHHLRKKLADSAIKTVRGVGYMLET >gi|319804309|gb|ADMF01000028.1| GENE 27 27925 - 28473 501 182 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVEFFISWHAALVFLAALASPGWGAATAGLFIGIEADSWTLPLWAAVGGCLRDAALYAWT AAGHWALIRLPKSIQTQLHQAPVATAVGLQSFHLFRWDLAAAAGAGGQPRLRFLAWLTVA SAICAYLGAVAAWGLFILLCPGGLGLFEARQSLPGLILLALLAAETLRIVLERLIERFGN PS >gi|319804309|gb|ADMF01000028.1| GENE 28 28522 - 29034 302 170 aa, chain + ## HITS:1 COG:RSc2943 KEGG:ns NR:ns ## COG: RSc2943 COG3671 # Protein_GI_number: 17547662 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 41 167 15 120 124 75 37.0 6e-14 MTEFNSGRGGRDDDIVDLEAQPVNATGNSAEGSSREPIKQEPLSGTVTVAHIVYCLHSIS ILIGLLTAGLSIAGAFVFSAPSILAVIINYIFRSDASGTWLESHFSWQIRTFWYALLWLV VLYLVSLPLVFFGIGIFVFIAGMLVLGIWVAWRILSGWRRLASHREMPLS >gi|319804309|gb|ADMF01000028.1| GENE 29 29079 - 29636 389 185 aa, chain + ## HITS:1 COG:YPO1065 KEGG:ns NR:ns ## COG: YPO1065 COG4681 # Protein_GI_number: 16121366 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 1 176 1 177 182 144 40.0 1e-34 MALGATVYKAQLSISDLDRNWYGEPVLTLARHPSETETRLMLRVLAWCMRAGEKLEFGRG LSTDGDPALWELDDTGAIIDWVELGVPDLRTVRKAAGKSEHVLVLAYDEARSAPWWESLK GDFSKISKLAVVLIHDDEAKALGSMATRNMKLAVTIQDGVFWVSNDHSSLQIDPEWLKRE DERWT >gi|319804309|gb|ADMF01000028.1| GENE 30 29692 - 30084 306 130 aa, chain - ## HITS:1 COG:SMc01520 KEGG:ns NR:ns ## COG: SMc01520 COG2346 # Protein_GI_number: 15966172 # Func_class: R General function prediction only # Function: Truncated hemoglobins # Organism: Sinorhizobium meliloti # 2 129 4 130 130 83 35.0 1e-16 MPIEKTLYDSVGGDAGLDRLTAAFIRVLLADPQLEELRSIYAGRDLAHYEARLKEFLSGW LGGPPLYLERHGMPMLREGHRRLVITQNARYQWMSAMRSALAETVSDPEVRLRLEGAFAK MAESLVNTDR >gi|319804309|gb|ADMF01000028.1| GENE 31 30097 - 30390 208 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859907|gb|EFL82984.1| ## NR: gi|302859907|gb|EFL82984.1| putative cyd operon protein YbgE [Burkholderiales bacterium 1_1_47] # 16 95 1 80 86 67 47.0 3e-10 MTNTKPAASSRGSTALRIISFLGALACAAVVVLYPRAIAEDATGVPHGALVGMLFGMSIL WVDGFGFTPQHRIFRYLLSPLLGWILLLGFGWIVFCR >gi|319804309|gb|ADMF01000028.1| GENE 32 30335 - 30532 147 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRKAVDPREDAAGFVLVIVAGHRSFDDSGKYNGKAKSHDPIEVAHEELLESRWSALQMH LQRTV >gi|319804309|gb|ADMF01000028.1| GENE 33 30540 - 31679 1174 379 aa, chain - ## HITS:1 COG:STM0741 KEGG:ns NR:ns ## COG: STM0741 COG1294 # Protein_GI_number: 16764111 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 379 1 379 379 429 58.0 1e-120 MIDYEILKAIWWLFIGVLLVGFTIMDGQDMGVGTLLPFLGKNDSERRIMINSVAPHWDGN QVWFVTGGGAMFAAWPLMYAIAFSGFYWAMLVILAALMFRPLAFDYRSKVPAERWRSSWD WLLFVGSAVPPIICGVAFGNLLQGVPFEIDSTMRPVYTGSFFGLLNPFGLFCGIVSIVMV IFHGANYLALRTEGSLHQRAVSIASISGVLTAVLFALGGVWTYLGIDGYVAVAGLAPAGP ANPLAKTVELQASAWFSNFAAYPVLWLVPALGIFGALGGALMIRAGRGWPAIICSSISLL GIVLTPLVSMFPFVMPSSTMLNAGLTLWDCTSSQLTLEIMFFVTLIFLPIVLLYTTWAYR VMSGKLNAEYIEKNTHHLY >gi|319804309|gb|ADMF01000028.1| GENE 34 31700 - 33250 1642 516 aa, chain - ## HITS:1 COG:STM0740 KEGG:ns NR:ns ## COG: STM0740 COG1271 # Protein_GI_number: 16764110 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Salmonella typhimurium LT2 # 5 515 3 513 522 633 61.0 0 MIPSDLVDLSRLQFALTAMYHFIFVPLTLGLSFMLVVMELAYVISGKQMYKDMTRFWGKL FGINFAIGVATGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGW DRLSRGKHLLVTFLMALGSNLSALWILVANGWMMNPIGAEFNFETMRMEMTNFWAVFTSE WAQAKFVHTIGGGYMTGSFFVMAISAYYMLKRQDVKFAASSFRLAAAFGLVAAALTLHMG DESGYLVTRDQPTKIAAMEAIWDTHEAPAPLSLFAIPDQEAQKNHMEVSVPWLFGLMGTR SLSTEIPGIKQLTADAETRIVNGQKAVSTLEALRKDPKNEALQTEFKAVEKDLGFGLLLK RYTEDVTKATPEMIKQAAADTIPQVAPMFWSFRVMIGCGLALLLLYIVGLYFSVKKTLDT KTLYLRATLLALPLPWIACEVGWFVAEYGRQPWTIYNILPTHLSVSSLTSGDLIGSILGF VVLYTLMLIAEMWLMVRFCRKGPSSLGTGRYHFEQQ >gi|319804309|gb|ADMF01000028.1| GENE 35 33300 - 33506 125 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEPRPAPKRRPQLIVEIALVIACKLCIIFCLWWLFFSPEHRTTVTPDKMGDAIFSSAPSE VQTPPAKR >gi|319804309|gb|ADMF01000028.1| GENE 36 33695 - 34978 717 427 aa, chain + ## HITS:1 COG:hydG KEGG:ns NR:ns ## COG: hydG COG2204 # Protein_GI_number: 16131834 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Escherichia coli K12 # 118 415 130 439 441 153 35.0 5e-37 MAVNTALQGILDALGEPRLLIRPDYSVAYANRAFRRRFGIEDFEGRRCHELVFHEFRPCS ACGRICPMERAGLSGQPERTIERDFVPGGERFVELEVVPVPAPDGAAVYFMEQVLVRDDP QSVREREGIVMHSAAVQQTVAAIGRVAASDVPVLFCGPSGSGKSRYARLLHENSRRAVHA FIKIDCTTLNDERFENELLGRLNTVGSSRTGGLSASSGGTLYFDEVTALSMGMQRRLLTL LETGFVREAGSEHSVAVGWRVVCATSALNPAALVGAGQLRADLWLRLCVARIRVPALAER IEDIEELAQLILKRLPRAERTALKLSPEGLMVLRRRPWPGNIRELESVLERASLLSDSGE IGPDSLDDPLGGNGLQDVMPKWGETTDSAVSVDGKTRRELARALGISERTLYRRLRERRD SGNGEIL >gi|319804309|gb|ADMF01000028.1| GENE 37 34975 - 35886 136 303 aa, chain + ## HITS:1 COG:mlr6787 KEGG:ns NR:ns ## COG: mlr6787 COG0596 # Protein_GI_number: 13475663 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mesorhizobium loti # 44 268 34 242 278 65 28.0 2e-10 MSTLSPAVHLLFPLVAGETRLVIPLEETVLSAALKPASDRSQRLIVFVHGAASNASRWEE FVDTTALSQRWTLVRFDLRGHGASPARRPGRLENYADDIAAMIGAAGAHGPIVVVGHSLG AAAALVLARRFPHIVNGLILIDPLLEGCLTPEALCMRRRAPLLHLLEICGRIAGLCGLSR RLAPCRLRTMDEEARQKIAQGGAALLAFKKSYSSVWNDLKHEHLDVFARDLLEVGRPTAS LAELGLPLLVLGADSGTFTNAAAMQRETEEAGGRFELLHCLHWPLTECRPAVEAALIRWA QQF >gi|319804309|gb|ADMF01000028.1| GENE 38 35954 - 36472 484 172 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859911|gb|EFL82988.1| ## NR: gi|302859911|gb|EFL82988.1| arylesterase-related protein [Burkholderiales bacterium 1_1_47] # 1 149 1 150 282 148 57.0 1e-34 MVPAATTVGGYLQSLPNDRRVSMARVCSMIRRSARGVRESMRFGLAFYELDGPIFAVKSH DKSLTLYYAEKDAAAAGVGRWKGLDVEHRCVEFRDLNCLPLDVVENIVRASLKLRRGRPI EDLPTQAELLEVWGIREEDAAVAPPIVRIVVPHDEEAEPNSENKTEKSAAAN >gi|319804309|gb|ADMF01000028.1| GENE 39 36608 - 37105 273 165 aa, chain - ## HITS:1 COG:no KEGG:Bcenmc03_4854 NR:ns ## KEGG: Bcenmc03_4854 # Name: not_defined # Def: hypothetical protein # Organism: B.cenocepacia_MC0-3 # Pathway: not_defined # 34 165 41 172 172 63 30.0 2e-09 MRLASACLLITSVSALLVGCALAPTKSVLEQQKAVAVYSWEAQGQMVFRCTYDERGFFWA FLYPQGKLLDDKGREQAVLGSDFSVTARDGSLVKGHIIEQGPQESARNLRTAVIAVESTN HGLLSGVRYYARRQPEGGMPLASCSASQRGHLLRVPFRARYVFYR >gi|319804309|gb|ADMF01000028.1| GENE 40 37532 - 38110 405 192 aa, chain + ## HITS:1 COG:MJ0269 KEGG:ns NR:ns ## COG: MJ0269 COG1014 # Protein_GI_number: 15668443 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit # Organism: Methanococcus jannaschii # 1 186 1 176 178 157 45.0 1e-38 MFQIRLHGRGGQGVVTAAEMLALAGFMEGHKAQAFPSFGSERTGAPVVAFARLSSVEIRL REPIQEPDVVLIQDRTLLESVPVFSGLQPEGYVLINSSRSPEELGLEDLIKQLPKGHVMS VPATNYALESLGRPLPGAGMLAGFAAITGSMKLESVQKAYAVKFAGRIAEANAEIARLAY EAVLSQKEKIHA >gi|319804309|gb|ADMF01000028.1| GENE 41 38103 - 39368 982 421 aa, chain + ## HITS:1 COG:MA0032 KEGG:ns NR:ns ## COG: MA0032 COG0674 # Protein_GI_number: 20088931 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Methanosarcina acetivorans str.C2A # 5 386 14 403 403 359 46.0 6e-99 MLKQIEGSQGVAQAVALCRPDVVCAYPISPQTHIVENLGLLCRKGVLQDCEYINVESEFA AMSVAIGASVAGGRAYTATASQGLLYMAEAVYNASGLGLPVVMTVANRAIGAPINIWNDH SDSMSQRDCGWIQLFAETNQEACDLHIQAFRIAEELSIPVMVCMDGFVLTHAFEAMDIPD QADVDVFLPPYSPRQVLDPDHPYSIGAMVGPEAFTEVRWLAHEHMLAAIPVIERTQKAFQ KIFGRNSGGLLSNYYMEDAELAVFSMGALTGTIKDAVDEMREAGQKIGVVTLKCFRPFPF AAVREALRHVSRVLVIERMMSAGGAGAVSLEVMKALKGTAVDQKTVYAGLGGRSVSKASF KKVFGAALRNELQEDEFFLDLDRELLSRQLEREKTSRHIGPLPEALNRHVNERKLARGEE I >gi|319804309|gb|ADMF01000028.1| GENE 42 39371 - 40435 613 354 aa, chain + ## HITS:1 COG:MA0031 KEGG:ns NR:ns ## COG: MA0031 COG1013 # Protein_GI_number: 20088930 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Methanosarcina acetivorans str.C2A # 37 330 10 295 296 290 51.0 3e-78 MTQLVHFYQTGTFTAGNRLLDPEDRSIQSSMERFNSLTSGHRACQGCGEALGARYAVDAA MRAVNGRLAAANATGCLEVFSTPYPETSWQLPWFHSLFGNTAAVATGMAAAFRMRAKKTG KPMTRVIAQGGDGGTTDIGFGCLSGMFERNDDVLYICYDNEAYMNTGVQRSSATPPAART ATTQIAGSEPGNAWGQGKDVPLIAMAHGIPYVATATVADLRDLERKVEKAMSIHGARYIH IFVPCPLGWGAPSGKTVEIARLAAETGLFPVFEAEYGEVTHARKIRRLRPVEDYLKMQKR FAHLFGKKGDPATVARIQAVADRNIERFGLLDGEEDKEMIIPVPAQADARTQAR >gi|319804309|gb|ADMF01000028.1| GENE 43 40461 - 42098 808 545 aa, chain + ## HITS:1 COG:PAB1214 KEGG:ns NR:ns ## COG: PAB1214 COG0493 # Protein_GI_number: 14521926 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Pyrococcus abyssi # 36 423 51 471 475 232 35.0 2e-60 MRVKPFAITLDVGTSLANRTGSWRTLKPVYVDRLPPCNAKCPAGEQCQAWLFHAQSGNYE NAWKQIIEDNPFPAVMGRVCYHTCQGACNRNGIDEPVGINAVERFLGDYALEKDWQLPVP AADTGKRILIVGAGPAGLSAAYQLRRLGHAVHVVESAEAAGGMMRYGIPKYRLPREVLDQ EIARIAALGVEFEFGREVKDLNAEMKSAGYDAAFLGAGASLAHRAYIPAGDAAHILDAVS VLRSMEAPAQGEETPMLGRRVVVYGGGNTAIDVARTVKRLGSEPIVVYRRTRDRAPAHAF EIQEAIEEGVSMKWLSTISEAEAGEIRIEKMKLDESGYPQPTGEYETIAADSVVLALGQD TNLGFLAAMPNLQVDRGSVVVDADMMTSVPGIFAGGDMVQGDRNVTVAIGHGKRAARAID AWLKGVTATEEKPVGSASFDRLNPWYYADAPQKIRPQLDIVRRQTTFEEVLQGLTEENAL FEARRCMSCGNCFECDNCYGVCPDNAVIKLGPGKRFRFNYDYCKGCGICANECPCGAIDM VREDI >gi|319804309|gb|ADMF01000028.1| GENE 44 42182 - 43984 593 600 aa, chain + ## HITS:1 COG:narQ KEGG:ns NR:ns ## COG: narQ COG3850 # Protein_GI_number: 16130394 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Escherichia coli K12 # 11 592 3 554 566 250 30.0 7e-66 MTTSFLNAETLRRSLYAQFKCVFWLITIFVVLAAGPAIVLTEQSTGSGGAINVSGSLRMM SYKLTVAVSNPYATYQERDKATRDAVKEFGTRLESPSLTASVPLDAKNHIRELYELVHKR FSDEVSPLAFESIDSEAARRVFLLKVPGFVDDVDRFVFALEESLSWRLTLLKVCLLIMLA GAIALTFIMLSVMRRKVFAPLEELEATAERVRQKNFTARSKSADSSNEIGRFAKSFNFMV SDLERLYGSLESEVARTTADLHRRNRGLEFLARASEDLMVDGPSLAGAVSEVLKGAVELA EARSAVFYVAKNREQGWTSETGYLFAKTIGWADAIGSSEFAAHGSSMTLVGMMKVEFGEV PDAWRRNFFEMTASLIGRAVEAVLRVTDEQRLAVLEERSTIARELHDSIAQSLSFSKIQL LRLRRALMPGAPQGMAQEVLLELDHGISTAYRQLREVLSAFRLQLSGAGFPGAVNTAVDA FRNRTGLEITVKNALIGVELSSNDQIHFIQILREALANVEKHARATKVEVCIERAPDGAC TMQVVDNGVGIPEHAEKENHFGLSIMRERAAALGAVLSISRRPEGGTIVFMSRPPQKSAL >gi|319804309|gb|ADMF01000028.1| GENE 45 43981 - 44661 333 226 aa, chain + ## HITS:1 COG:PA3879 KEGG:ns NR:ns ## COG: PA3879 COG2197 # Protein_GI_number: 15599074 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 217 1 215 219 196 50.0 4e-50 MTTMNPITPVEQHTVLVVDDHPLFRRGVCELFSLDPTIRVVGEAGTREEALDLAEKLSPD LIVLDLNMKGSSGVEILTTLKERDPSQRVVILTVSDSGEDFFSCIRAGADGYFLKDMEPE KVLYCVRESLEGRLTVDPAMVRYLTDLLRGKAPKVEETVSLTDREEDVLSCIARGMTNKM IGRELKISDGTVKGHVKHLLKKLGFNSRVEAAVWAAERTEKQKRQT >gi|319804309|gb|ADMF01000028.1| GENE 46 44732 - 45082 369 116 aa, chain - ## HITS:1 COG:Cj0783 KEGG:ns NR:ns ## COG: Cj0783 COG3043 # Protein_GI_number: 15792121 # Func_class: C Energy production and conversion # Function: Nitrate reductase cytochrome c-type subunit # Organism: Campylobacter jejuni # 36 105 69 145 174 57 36.0 8e-09 MTRSPLISVSVSAAAAAVLMALAMPASAVDSEIYGAPGLVPHPVKDYLPITVNKNMCVMC HKEQKGDVRVKGEIPKSHFTASGKLAGERYECLLCHAESSNAKPLAPVDPNDSTAP >gi|319804309|gb|ADMF01000028.1| GENE 47 45079 - 45951 489 290 aa, chain - ## HITS:1 COG:STM2257 KEGG:ns NR:ns ## COG: STM2257 COG0348 # Protein_GI_number: 16765585 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Salmonella typhimurium LT2 # 3 274 11 275 289 190 38.0 2e-48 MNKAFAVNGFVRRYRWTLLRRATELLVLICFTGTARWGWEVFGKPLLVGDLSSSRILGVI PLDDPLALFERLCAGIIPTASAAIGALLITLFYGLLGSRTFCGWVCPMNFVVETAAWLRR KLNLPADAVRLPRLTRYATLAGVLLASILTGSAAFETVSPQAFLWRDIIFGTGLSALSAV LTVFALELGLMKDGWCGHLCPLGAFWSLAGRASPRPIIQIAFIDEHCTRCADCLKVCPEK QVIRFKELAQTGRIPSGDCLNCGRCIEICSENALHFRLGSQKTKPTGDPL >gi|319804309|gb|ADMF01000028.1| GENE 48 45948 - 46748 237 266 aa, chain - ## HITS:1 COG:napG KEGG:ns NR:ns ## COG: napG COG1145 # Protein_GI_number: 16130142 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Escherichia coli K12 # 1 228 1 231 231 203 48.0 3e-52 MSRQPPSLGRRAFLEAALASGCAAAAGTFLLSMVPSRESAAAWRPRPPGASLESDFLAAC ARCGQCVVACPYGTLRLAGMFDPAPAGTPYFTPRSIPCEMCRDLPCVKACPTGALNPKLE DVRNAKMGVAVVDPNACLSWQGLRCEVCFRECPEAGRAITIETHPRELSKHAVFVPIIHP DACTGCGLCEKGCPTDEASIRVADPRGVLGTIGSHYRLSWLSEDDPKNTRRETTPEKSIS KNDPNPASDSAESAPGLDYLNSGDVP >gi|319804309|gb|ADMF01000028.1| GENE 49 46752 - 49496 1905 914 aa, chain - ## HITS:1 COG:Cj0780 KEGG:ns NR:ns ## COG: Cj0780 COG0243 # Protein_GI_number: 15792118 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Campylobacter jejuni # 10 914 2 924 924 966 52.0 0 MTSECPITFHRRAILKTGLAASAAMALGIPVTSTAAAEAAKLDNDIAWHKGVCRFCGTGC GLQVGVRNGRVVATKGDPDAPVNRGLNCVKGYFNAKILYGKDRLTRPLMRMKDGKFDKNG RFEAVSWETALTEMTKQMKRAYKDKGPAGISIIGSGQYTIPEAYTASKFMKGGLRSNNID PNARLCMASAVVGFYQTFGVDEPANCYADIEKADLFLLWGNNMAEAHPVLWSRVANRRLT HQATRIVQLTTHRSSTSNLSDLVIIFKPNTDLAILNFVIREIIHRGKVNQEFVDAHCIFC AGVTDIGYGLRQTDKYAWPAEKDIMAKQLSIKLDKWEAIGQGRKEGEVVPQKNTGATAGK HWRISFEDFKKGVEPYSLDFVAELAKGDNAESLADFKKKLMELADYVCDDSRNIMSYWCM GVNQHQRGVWVNEQIYDLHLLLGKHALPGNGAFSLTGQPSACGSAREVGAFSHRLPADML VANPKHREKTEKIWNLPAGTLNPKVGADLMAILRGVEDKSIDFLWTQVVNIIQSAPNNTH WIEACRRPDAFVVVSDIYPTFSARCADLILPVAGHFEKWGLYGNAERRTQGWHQLVQAPG EARTDVWTLMELAKRFTIGETWCEQTLKGVPGDKLPNVLDKAAELGYKPTDTLFDVLFAP TGKRAEAVWPDPLYPNELNATGDALGLKYFPEKALFNEYRQFTVGNGHDLADFDTYQSAK CRGLIWPVVNGKETLYRFNLEYDPYAKADNLFYGMLMKPVATGDLYGVTNPEAKAYKGTA KIFFRPYAAPVEQPDGQYDLWLCTGRILEHWHTGSMTGRVPELHRAAPSALLYMNPDDAQ KRGLKRGDLALVTSRHGECKAVVETQVRNIMPAGSTWLAFFDEKVRTNAVVIDSTDPISL EPDFKKTAVRVTRA >gi|319804309|gb|ADMF01000028.1| GENE 50 49573 - 49809 278 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302860148|gb|EFL83225.1| ## NR: gi|302860148|gb|EFL83225.1| NapD protein [Burkholderiales bacterium 1_1_47] # 1 76 1 76 86 70 47.0 4e-11 MNYSAILVIALPGRFQDVITAINRIEGVEAHISDPDSDRLICTIEAPTTDDEVRLFHRVA ELDGVNDVSLIEHRLDLA >gi|319804309|gb|ADMF01000028.1| GENE 51 49948 - 51168 777 406 aa, chain - ## HITS:1 COG:CC1281 KEGG:ns NR:ns ## COG: CC1281 COG0477 # Protein_GI_number: 16125530 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 3 392 180 571 586 219 35.0 7e-57 MSRLPAVGFILACVFLDALGIGLIIPVLPRLIGTLAANADAQTSWYGSIMVSYGLMQFLS APAIGALSDRIGRRPVLLTGILGLAVMMFVPAFTDSLWLILASRLVGGIMSSNIVVAQAY IADVTEASKRVAAFGRIGAIFGIAFILGPALGGMLGEVDPRIPFLCAGVICIINFFYGLF VLPESLREPSEAPFSLAHANPFASLSALSREPVVLPILLVITLYTLSQSLVQCTWALYTE FRYGWTPRTIGFSIFLLGAAITFTQGWLLPRLTNHFSAGHLITGGLLIGLTALLGIGLSP TGGPALILLAAFAFMGIVGPTLQSIISRTGSRTTQGIRLGAASSLNSFTGAVSPVIGTPL LFCTTQNAPNDIAAGTPYFLAAFLVAAALLLSQRLGIGKAITDNQQ >gi|319804309|gb|ADMF01000028.1| GENE 52 51482 - 52723 950 413 aa, chain + ## HITS:1 COG:PA2042 KEGG:ns NR:ns ## COG: PA2042 COG3633 # Protein_GI_number: 15597238 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Pseudomonas aeruginosa # 13 407 14 406 409 404 61.0 1e-112 MKRVFKFAMPFLQASLVKQILVGLILGMALGLTFPDAAKSVGFLGTVFVMALKGVAPILV FVLVMSSIANQSDISQGNMHVKPIIVLYLVGTFLAAVIAVGASFLWPTEITLQAAQDTVA TPGGIAEVFGNLILQAVDNPVHAIASGNYISILVWAIAMGAVLRQSHSSTREVLLDAAKT VEFIVRLVIRFAPFGIFGIVASTLATTGLEVFAGYLKLLAVLVGTMFFIALVVNPILVWL MIRRNPYPYTLMTLRESGVAAFFTRSSAANIPVNLEICRRLNLPESTYSISIPVGATVNM QGAAITITVLTLAAAFSLDVQVSTATAIFLSFVAALCACGASGVPGGSLMLIPLACGLFG IDQNTAMQVVAVGFIIGVVQDSCETALNSSADALFTIAACKRADRLAGKDISD >gi|319804309|gb|ADMF01000028.1| GENE 53 52871 - 54700 1074 609 aa, chain + ## HITS:1 COG:RSc3025 KEGG:ns NR:ns ## COG: RSc3025 COG0514 # Protein_GI_number: 17547744 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Ralstonia solanacearum # 5 606 20 631 637 658 55.0 0 MHRYSSPKEALKQVFGYDAFRGFQEEVVRAVVRGEDVLVLMPTGGGKSLCYQIPALLRDG VAVVVSPLIALMQDQVDALEELGVSAAYLNSTLTPEAAADVRRRLRCGELDLLYVAPERL LMSSMQALLSEVKISLFAIDEAHCVSIWGHDFRPEYGALSILREHFPNVPRIALTATADP KTREEIVNKLLVHPKEFVASFDRPNIFYRIVDKKNVRSQLAQFIKTEHPGECGVVYCIAR QTCESICEYLCSKGIHALFYHAGLSNEERAERLAAFQREDDIVMVATIAFGMGIDKPNVR FVAHADMPKSIEGYFQETGRAGRDGLPSDAWMAYGLADVVNQRYFIDKSGADDLHKQIET EKLDAMLGLAEACTCRRVQLLAYFGEKSTPCGNCDNCVDPPQMMDATIAAKMIISCIWRI QQKSNMSFGTLHVIKVLLGESTESTKRHDHEALSTWGIGKELTLEQWRSVMRQLIARHVL WIDSANHNVVRLGALANNVLRGAMKIEVRRTVMAKAQKQSRFSSPERDEMLAQLSVQERQ IFEALRVWRRDLAKELGKPPYVLFIDRTLVAIAKLKPACIDDLLGIPGVGRRKVERYADS ILEIVGNEL >gi|319804309|gb|ADMF01000028.1| GENE 54 54705 - 55478 377 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 4 245 7 248 259 149 37 3e-35 MLNVFITGASTGIGAALARQYASRGAVVGLVARNRDKLEALADALPGGRDRNIVLPCDVT VREEVFAAAEEFERLSGGTTVVIANAGMSHGVKTEYLEDLDMLEDIYRLNVFAMAYTFHA FIGPMKARGNGQLVGIGSVAGIRGLPGSEAYCASKSAVITYCESLRVEMQKYGIRVSTIC PGFVRTPLTAENPYKMPFIMEPEDFAREAVEAITARDRYRVIPWQMGVLAKIMRCVPDGL WDKILANRKQKPRTTAQ >gi|319804309|gb|ADMF01000028.1| GENE 55 55562 - 56203 615 213 aa, chain - ## HITS:1 COG:RSc0285 KEGG:ns NR:ns ## COG: RSc0285 COG0526 # Protein_GI_number: 17545004 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Ralstonia solanacearum # 29 212 30 217 218 125 37.0 8e-29 MITRRQFVLGAAALPLSDQLFAAQSFTAGKEYLVVTPSAPTSRDKIEVVLFFAYTCSHCL QFEPHFAKWAKTAPADVAIRICPVAWQPKLDPFTQTYFSLEALGLVDKLSMPFFESVIYQ EHPYNFENPSADISDFMAKAGVDRQKWEQTMRSFSVMNKTRQARQLWNAYQIDSTPMIGV GGIYATGPHLVGTREGTPACIDYLIEQVRAQRK >gi|319804309|gb|ADMF01000028.1| GENE 56 56257 - 56802 383 181 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859919|gb|EFL82996.1| ## NR: gi|302859919|gb|EFL82996.1| sporulation related protein [Burkholderiales bacterium 1_1_47] # 5 177 8 176 180 75 32.0 1e-12 MAKSGFASGFAGFLIGVVTGLGVAAGAMLVIAKSPVPFVDKVDKVTADVDPAAKLAGAVD PNARLNQTAGEDPTGETGRVQTVTVVDKDPKLKSATPPTANTRAATPAATFWVQVGAFRQ KADAINSSAALGMQGIIAQVQEGGPAGWRVRVGPFDSRPDAREMLDRLTDQGLSPTIVEQ K >gi|319804309|gb|ADMF01000028.1| GENE 57 56820 - 58580 1435 586 aa, chain - ## HITS:1 COG:RSc0287 KEGG:ns NR:ns ## COG: RSc0287 COG0018 # Protein_GI_number: 17545006 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 576 1 600 600 577 53.0 1e-164 MLDQQKDAIQNLIVRALAALDVADVVPQLEKPKDPTHGDVACTVAMQLARRLKQNPRAIA ETLVAEMKADEAFATLLETVEIAGPGFINFRVAQNARAAIVSQVLQEGEKFGRSNEFAGK SVLLEYVSANPTGPLHLGHARQGALGDVLANLLDSQGWKVSREFYYNDAGVQIGNLAMSV QVRCRQLQGESLELPENAYHGEYIVSIARDFLDKKPVIPHGGEPIESTGDYGDTDLIRRY SVAYLRNEQDDDLSALGVRFDNFFLESSLYTTGAVQKTVQAIIDAGYTYEADNALWLRTT AFEDLGNGLRDDKDRVMKKSDGTYTYFVPDVAYHLNKFSRGYTKAVNIQGTDHHGTIARV RAGLQAASKTLGVTIPKTFPEYILHKMLSVVKGGEVVKMSKRSGNYVTLRDLVDWAGRDA ARFFLVSRKADAEFVFDVDLAKKNSDENPVYYLQYAHARICSVFTNALEQGYEIPNREAL ATMDLSPLNSKAAEALIGAVAEYPNTLRLAARDHAPHILCYYLKGLAAAFHAFYNAERVL VDDAVERNARLALLAAARQVLANGLALLGISAPERMARRDDEADAQ >gi|319804309|gb|ADMF01000028.1| GENE 58 58614 - 59420 578 268 aa, chain - ## HITS:1 COG:RSc2220 KEGG:ns NR:ns ## COG: RSc2220 COG1469 # Protein_GI_number: 17546939 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 9 264 10 265 268 252 50.0 6e-67 MEAPQTNSLPDIQSSGDPRNIRINRVGVRGVELPVTVADEADVQHTVARLTMSVALPPDH RGTHMSRFIGILEAQTEPYTIEVVQSTIRAMLAELQAQEGTFEIRFPFFLRKAAPISRLE SVMNYECAWTATISPAAFELRQETITPVTSLCPCSKEISRYGAHNQRSRLTSSIVLASPM SLREQIALSEAAGSAPLWARLKRADEKFVTEYAYDNPKFVEDIVRDMAESLNKDSRVTAY RVESENFESIHNHSAYAWIEHDKRTKTN >gi|319804309|gb|ADMF01000028.1| GENE 59 59712 - 60137 300 141 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPMFIFPQPGGSPLLSLLVGLAAIAIVIGLIIFFLPLIAGIFLAAVVLIGAVILWGWIKR KFGLESSDERRFREAMEAAQRTAREQFRSGMKPSGTVYEREEVLVTKIGQPQRRRMQDVE DIEENPPQPNEKETHGGKPDA >gi|319804309|gb|ADMF01000028.1| GENE 60 60181 - 61647 522 488 aa, chain - ## HITS:1 COG:VC1670 KEGG:ns NR:ns ## COG: VC1670 COG1502 # Protein_GI_number: 15641674 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Vibrio cholerae # 3 488 4 484 484 318 36.0 2e-86 MPVFDNLSLISILLMAVQFFIVVSVVIRVILTRHPPGSSFAWILLTVVLPYVGFFLYLML GERPIGRLRARLLRHATHYWGRLSQVRSPPLGPLPYHLVRHRTYIHLASKLAGMPVMGGS AVSLKASAAETIAALQKDIQNARYSIEMEFYIWEEGGSVDVIIDALFAARRRGVSVRLLV DDFGSRNFLRSNARRDLEAAGVEIASAMPMRLLQLFDLQRADIRLHRKTVVIDGSIAYTG SFNMIEPHSYAEAKVIGSWIDAMVRIEGPGAKMLEAVWRFDWALQPDGTPLDFDGDFSQM RIPSMGSATLVAVPSGPYQSGDRNLLLILETISHAEHSLSITTPYFIPTESVVSALLNAA LRGVDVRLIVPIEADNAFVNWAMRRYFDDLLQGGIRILRYQGGLLHTKSIVVDDEFAVFG TLNIDNRSLHLNFELMMVIFDDEFVASLKQLHRTYEAKCIEVSPQEWRQRPLSNRLKEGA AYLISPLL >gi|319804309|gb|ADMF01000028.1| GENE 61 62143 - 62649 678 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 169 1 179 407 265 72 4e-70 MAKEKFERTKPHVNVGTIGHVDHGKTTLTAAICTTLAKHFGGEAKAYDQIDAAPEEKARG ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLARQVGVPYIIVYLNKCDMVDDEELLELVEMEVRELLSKYDFPGDDIP Prediction of potential genes in microbial genomes Time: Sun May 29 20:07:44 2011 Seq name: gi|319804291|gb|ADMF01000029.1| Sutterella wadsworthensis 3_1_45B cont1.29, whole genome shotgun sequence Length of sequence - 17227 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 2, operones - 1 average op.length - 12.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 14/0.000 + CDS 3 - 494 713 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 617 - 654 3.1 + TRNA 531 - 606 83.5 # Trp CCA 0 0 + Prom 531 - 590 78.9 2 2 Op 1 46/0.000 + CDS 777 - 1160 423 ## COG0690 Preprotein translocase subunit SecE 3 2 Op 2 45/0.000 + CDS 1177 - 1716 538 ## COG0250 Transcription antiterminator + Term 1731 - 1779 5.9 + Prom 1752 - 1811 2.5 4 2 Op 3 55/0.000 + CDS 1848 - 2279 668 ## PROTEIN SUPPORTED gi|145588231|ref|YP_001154828.1| ribosomal protein L11 5 2 Op 4 43/0.000 + CDS 2280 - 2975 887 ## PROTEIN SUPPORTED gi|221069401|ref|ZP_03545506.1| ribosomal protein L1 + Term 3077 - 3114 3.1 6 2 Op 5 47/0.000 + CDS 3410 - 3940 554 ## PROTEIN SUPPORTED gi|149925887|ref|ZP_01914150.1| 50S ribosomal protein L10 7 2 Op 6 28/0.000 + CDS 3989 - 4366 460 ## PROTEIN SUPPORTED gi|187476526|ref|YP_784550.1| 50S ribosomal protein L7/L12 + Term 4391 - 4427 6.4 + Prom 4474 - 4533 2.8 8 2 Op 7 58/0.000 + CDS 4650 - 8819 3961 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 9 2 Op 8 5/0.000 + CDS 8837 - 13222 4189 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 13273 - 13316 3.5 + Prom 13310 - 13369 2.6 10 2 Op 9 56/0.000 + CDS 13514 - 13891 594 ## PROTEIN SUPPORTED gi|17547743|ref|NP_521145.1| 30S ribosomal protein S12 11 2 Op 10 51/0.000 + CDS 14055 - 14525 663 ## PROTEIN SUPPORTED gi|94312257|ref|YP_585467.1| 30S ribosomal protein S7 12 2 Op 11 30/0.000 + CDS 14596 - 16698 2358 ## COG0480 Translation elongation factors (GTPases) 13 2 Op 12 . + CDS 16750 - 17226 633 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|319804291|gb|ADMF01000029.1| GENE 1 3 - 494 713 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 163 245 407 407 279 81 1e-74 VERGVIKVGDEIEIVGIKPTTKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQ VLAKPGSITPHTHFKGEVYVLTKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMV MPGDNITMTVKLICPIAMEQGLRFAIREGGHTVGAGVVAQILE >gi|319804291|gb|ADMF01000029.1| GENE 2 777 - 1160 423 127 aa, chain + ## HITS:1 COG:RSc3040 KEGG:ns NR:ns ## COG: RSc3040 COG0690 # Protein_GI_number: 17547759 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Ralstonia solanacearum # 1 123 1 123 126 92 47.0 2e-19 MSNQEVETSSSKSDLLLVTLAALLAIAGVVGFALLSEEALAIRLGVLGGGLVLAVIIAWF SPSGKRFLNYGQQSWEELRRVVWPTRKETLNTTGLVMAFVVIIAFFLFICDKLIEWGLYD VLLRISI >gi|319804291|gb|ADMF01000029.1| GENE 3 1177 - 1716 538 179 aa, chain + ## HITS:1 COG:RSc3039 KEGG:ns NR:ns ## COG: RSc3039 COG0250 # Protein_GI_number: 17547758 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Ralstonia solanacearum # 5 179 19 194 194 182 50.0 2e-46 MADGKMNWYTLHVYSSMEKSVKNALEERIAQSGELRSSFGEVLLPTEKVHEVRNGRKVTS ERRMYPGYVFIQMEMNDATWHLVNSTPRIIEFLGNNNPVPLSPTEVANILSAAENSSDKP RPKIEFEIGEMVRIKSGAFKDFTGRVDGVDYDKSRLNVFVSIFGRDTLVDLGFNEVEKI >gi|319804291|gb|ADMF01000029.1| GENE 4 1848 - 2279 668 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145588231|ref|YP_001154828.1| ribosomal protein L11 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] # 1 143 1 143 143 261 90 2e-69 MAKKIVGFIKLQVPAGKANPAPPIGPALGQRGLNIMEFCKAFNARTQGVEPGLPIPVVIT AFADKSFTFIMKTPPATILIKKAAKIQKGSARPHTEKVGKITRAQAEEIAKTKAPDLTAA DMDAAVRTIAGSARSMGIVVEGL >gi|319804291|gb|ADMF01000029.1| GENE 5 2280 - 2975 887 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|221069401|ref|ZP_03545506.1| ribosomal protein L1 [Comamonas testosteroni KF-1] # 1 231 1 231 231 346 75 7e-95 MAKLTKRQQAFQGKVEAGKVYPAVEALNLVRQNATAKFDESVDVAIQLGIDPRKSDQAVR GAVVMPEGTGKTVRVAVFTQGAKADEARAAGADIVGFDDLAHKVKAGELDFDVVIASPDA MRVVGQLGQILGPRGLMPNPKVGTVTPNVAQAVKNAKAGQVQFRADKAGIIHAPIGRASF EAERLQKNLAAIIDQLNKLKPASAKGQYLCKVSVSSTMGPGVRVDAGSINA >gi|319804291|gb|ADMF01000029.1| GENE 6 3410 - 3940 554 176 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149925887|ref|ZP_01914150.1| 50S ribosomal protein L10 [Limnobacter sp. MED105] # 1 176 1 176 176 218 62 3e-56 MGLNREDKATVIAEISEVVSNSSAMVIAEYRGLTVQAVTKLRAEARKNGVTVRVVKNTLV RRAVEGTGFAGLADQFTGPLVYGFSADPVAVAKVLVNFAKDNEKLVIRGGAMADYVMDVD AVKQLASMPSREELLAKLMATMNEPIAKFVRTLNEVPARFVRTVAAVRDAKEQAAA >gi|319804291|gb|ADMF01000029.1| GENE 7 3989 - 4366 460 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187476526|ref|YP_784550.1| 50S ribosomal protein L7/L12 [Bordetella avium 197N] # 1 125 1 126 126 181 80 2e-45 MALTNEEILDAIASKTVLEISELIKMMEDKFGVSAAAAAVAVAAPGAAAAAPAEEKTEFD VVLEAAGSNKIATIKAVRELTGLGLKEAKDLVEGAPKAVKEGLPKADAEAAKKKLEEAGA KVALK >gi|319804291|gb|ADMF01000029.1| GENE 8 4650 - 8819 3961 1389 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 1 1386 3 1387 1392 1530 56 0.0 MSMSYSFTEKKRIRKSFASRPSVLEVPSLLDIQLRSYEDFLQVNVKPAARSNNLGLQAAF TSIFPITSHNGFARLRFAGYELAEPEFDVAECQLRGLTYSSRLRAKIRLEIYDREAAQPE TIKEIRENDVYMGEVPLMTEKGSFIVNGTERVIVSQLHRSPGIFFEHDKGKTHSSGKLLF SARVIPYRGSWLDFEFDAKDILYFRVDRRRKMPGTILLKAIGYSVEDILARFFAFDSFTL LKSGAKLPVVPERLKAQTMSFDIVDAEGKVIVPHDKRITAKHLRDLNKANVTTITVPDDY LLGRVLGKTIIDQETGEVIANANDEITETVLAAMRAARVRKFDALFTNELDHGAYISNTL RLDDTPDQFSARVAIYRMMRPGEPPTEEAVESLFDRLFFDPDAYDLSRVGRMKVNARFGR PSAEGERTLTKEDIVDTMAMLVALRNGQDNVDLVNEKGEVRTCVVNGVDDIDHLGNRRVR CVGELAENQFRAGLVRVERAVKERLNQAESDGLTPQDLINSKPISAAIREFFGSSQLSQF MDQTNPLSEITHKRRISALGPGGLTRERAGFEVRDVHSTHYGRVCPIETPEGPNIGLINS LALYARLNEYGFLETPYRKVVDGVATKEIHYLSAIEEGKYIIAQANAEMDDNGRLTQELV SARDNGETILASPERIQYMDVAPAQIVSCAAALIPFLEHDDANRALMGANMQRQGVPCLR PEKPVVGTGIERTVAVDSKTAVQARRGGVVDYVDANRVVIRVNDDESVAGETGVDIYNLQ KFTRSNQSTNINQRPIVVKGDHVAVGDVLADGASTDTGELALGQNMLIAFMPWNGYNYED SVLISERVVADDRYTSIHIEELSVVSRDTKLGPEEITRDISNLSESQLARLDDSGIVFIG AEVKAGDVLVGKVTPKGETQLTPEEKLLRVIFGEKASDVKDTSLRVPSGMTGTVIDVQVF TRDGVKRDKRAESIIADALKRYRRDLDDQLRIVERDSFDRLRRQLAGHKVVSTMKFDGLP ADGVLTPEFLASVQGYDLFGLRMEEEVAQHFIDLTKQAIEHTREDNARKYEIKNDKLTRG DELPPGVLKMVKVYIAERRRLQPGDKMAGRHGNKGVVSKICPVEDMPYMADGRPADIVLN PLGVPSRMNIGQVLEVHLGWAAKGLGWRIEKMLKTETARQIRAFLNEIYNRTGKHEDLDS LSDEELMRMARNLQNGVPFATPVFDGANEEQIRMMLDLAFPDDEAQRLQLTSSKTQATLY DGRTGDAFERPVTVGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEM EVWALEAYGAAYVLQEMLTVKSDDVNGRTKMYENIVKGEHKIEAGMPESFNVLVKEIRSL GIDIDLVKN >gi|319804291|gb|ADMF01000029.1| GENE 9 8837 - 13222 4189 1461 aa, chain + ## HITS:1 COG:RSc3033 KEGG:ns NR:ns ## COG: RSc3033 COG0086 # Protein_GI_number: 17547752 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Ralstonia solanacearum # 4 1379 3 1379 1409 2113 78.0 0 MNSALNDILNQVNKDEHFDAIRIGLASPEKIHSWSYGEVKKPETINYRTQKPERDGLFCA KIFGPVKDYECLCGKYKRLKNRGVICEKCGVEVTLAKVRRERMGHIDLASPVAHIWFLKS LPSRMGMVLDIPLRDIERVLYFEAYIVVDPGLTPLSRGQLLTDEEFIQKTAEFGDDFKAM MGAEAIGELLRTIDIDAEVLRLRDELSTTNSEAKIKKYAKRLKVLEAFQRSGIKPEWMIM TVLPVLPPDLRPLVALDGGRFATSDLNDLYRRVINRNNRLKRLLEIKAPDIIVRNEKRML QEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGP ELRLHQCGVPKLMALELFKPFIFNKLVQRQLAPTPKAAKKMVENQEPVVWDILEEVIFEH PVMLNRAPTLHRLGIQAFEPKLIGGKAMQLHPLVCAAFNADFDGDQMAIHVPLSLEAQLE ARGLMMSSNNVLFPANGDPSIVPSQDMVLGLYYATREKINGRGEGMFFADIPEVQRAWDS GVVELQTRCTVRIKEYSLNRETGEKTPKIVRYETTVGRALLSEILPEGMSFKELNITLKK KEIAKLINRCFRLCGLRATVIFADKLKDNGYRLSTRAGISICVGDMKVPVQKEQLVRAAE QEVKEIEAQYTSGLVTQGERYNKVVDIWGRTSDQVGKVMMQELSTEPTIDRHGKKVSQES FNSVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHG ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTRGVEMRALVEGGEVIQALRDR VLGRVTAVDVINPDTHEVVIAAGTLLDERLCDKLDEVGIDMVKVRTPLTCDTRYGLCAKC YGRDLGRGTLVNAGESVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSIEAKSAGTV GFNEAMRFVKSSKGELVVISRSGEIIVMDHGRERERHKVPYGASLLIQDGQTIKAGQQLA TWDPMTRPIITEYAGRVKFENVIENVTVMNQVDEVTGLSSLVVIDPKKATKSGKSSSAGI LRPLVHLIDENGDEVKIPGTDHAVTIQLPVGAFVVVRDGQDIGMGEVLARIPTESQKTRD ITGGLPRVAELFEARSPKDAGMLAEVTGTVTFGKETKGKQRLIITDQEGNSHETLISKDK TVLVHDGQVVQKGEEVVDGPVDPHDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIE VIVRQMLRRVQITDPGDTHFIQGEQVERSEMLDENDRVTALGKRPATYENVLLGITKASL STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAYHQAHKAMEL AERLERATQAFEEPPVTEQMTTASAAEPAEDADSEEEVRPMVDPFAFIDHKAPVEADPKL SVKPSDAAAPSEPDADSKGAE >gi|319804291|gb|ADMF01000029.1| GENE 10 13514 - 13891 594 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17547743|ref|NP_521145.1| 30S ribosomal protein S12 [Ralstonia solanacearum GMI1000] # 1 125 1 125 125 233 92 7e-61 MPTINQLVRKPRELTHDKSKSPALKNCPQKRGVCTRVYATTPKKPNSALRKVAKVRLTNG FEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDTQGVKDRKQARSKYGAK RPKAA >gi|319804291|gb|ADMF01000029.1| GENE 11 14055 - 14525 663 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|94312257|ref|YP_585467.1| 30S ribosomal protein S7 [Ralstonia metallidurans CH34] # 1 156 1 156 156 259 82 7e-69 MPRRREVPKREILPDPKYGSVEITKFINVIMLDGKKAVAERIVYGALAQIEEKTGQSAIE VFNNAINNVRPLVEVKSRRVGGANYQVPVEVRPVRRLALAMRWLRESAKGRSEKSMPQRL AGELLDAAENRGGAVKKRDEVHRMAEANKAFSHFRF >gi|319804291|gb|ADMF01000029.1| GENE 12 14596 - 16698 2358 700 aa, chain + ## HITS:1 COG:RSc3022 KEGG:ns NR:ns ## COG: RSc3022 COG0480 # Protein_GI_number: 17547741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Ralstonia solanacearum # 1 698 1 700 703 1136 80.0 0 MARQTPISRYRNIGISAHIDAGKTTTTERILFYTGVSHKLGEVHDGAATMDWMEQEQERG ITITSAATTCFWRGMEMQWPPYRFNIIDTPGHVDFTVEVERSMRVLDGACMVYCAVGGVQ PQSETVWRQANKYHVPRLAFVNKMDRTGANFFKVYDQMKKRLQGNPVPVVIPIGAEDTFA GVVDLLKMKAIIWDDKSQGMKFTYEDIPAELVDSANEWREKMIESAAEANEELMNKYLED GELSEEEIVKGLRQRTIACEIQPMLCGTAFKNKGVQRMLDAVVQFLPAPTDIPPVEGFDL DDKPVTREASDDAPFSSLAFKIMTDPYVGQLTFLRVYSGMLNSGDTVLNSVKDQKERIGR LLQMHANERKEIKMVECGDIAAAVGLKSVTTGDTLCSLEHPIILERMEFPEPVISQAVEP KTKADQEKMALALNRLAQEDPSFRVRTDEESGQTIISGMGELHLEILVDRMKREFNVEAT VGKPQVAYRETIRSTVENAECKFAKQSGGRGQYGHVVLKLEPLPPGKGFEFVDAIKGGVV PREYIPAVEKGVEDTLKAGVLAGFPVVDVKVTLHFGSYHEVDSNENAFKIAASMAFKDGM RKADPVLLEPIMAVEVETPEEKMGDVMGDLSSRRGVIQGMEDMVGGGKNIKAEVPLAEMF GYATQLRSLTQGRATYTMEFKHYAEAPRAVAEAVIADKTK >gi|319804291|gb|ADMF01000029.1| GENE 13 16750 - 17226 633 159 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 158 1 168 407 248 73 2e-65 MAKEKFERTKPHVNVGTIGHVDHGKTTLTAAICTTLAKHFGGEAKAYDQIDAAPEEKARG ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLARQVGVPYIIVYLNKCDMVDDEELLELVEMEVRELLS Prediction of potential genes in microbial genomes Time: Sun May 29 20:09:42 2011 Seq name: gi|319804223|gb|ADMF01000030.1| Sutterella wadsworthensis 3_1_45B cont1.30, whole genome shotgun sequence Length of sequence - 48809 bp Number of predicted genes - 66, with homology - 63 Number of transcription units - 24, operones - 12 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 16/0.000 + CDS 2 - 517 753 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 519 - 564 2.2 + Prom 538 - 597 6.3 2 1 Op 2 40/0.000 + CDS 637 - 948 488 ## PROTEIN SUPPORTED gi|91785466|ref|YP_560672.1| 30S ribosomal protein S10 + Term 954 - 988 0.6 + Prom 963 - 1022 3.8 3 1 Op 3 58/0.000 + CDS 1114 - 1770 779 ## PROTEIN SUPPORTED gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 4 1 Op 4 61/0.000 + CDS 1782 - 2402 689 ## PROTEIN SUPPORTED gi|124268626|ref|YP_001022630.1| 50S ribosomal protein L4 5 1 Op 5 61/0.000 + CDS 2399 - 2698 314 ## PROTEIN SUPPORTED gi|187476541|ref|YP_784565.1| 50S ribosomal protein L23 6 1 Op 6 60/0.000 + CDS 2698 - 3525 1156 ## PROTEIN SUPPORTED gi|209521382|ref|ZP_03270095.1| ribosomal protein L2 7 1 Op 7 59/0.000 + CDS 3538 - 3816 405 ## PROTEIN SUPPORTED gi|163859269|ref|YP_001633567.1| 30S ribosomal protein S19 8 1 Op 8 61/0.000 + CDS 3817 - 4152 398 ## PROTEIN SUPPORTED gi|171060664|ref|YP_001793013.1| ribosomal protein L22 9 1 Op 9 50/0.000 + CDS 4173 - 4955 916 ## PROTEIN SUPPORTED gi|187476545|ref|YP_784569.1| 30S ribosomal protein S3 10 1 Op 10 . + CDS 4958 - 5374 609 ## PROTEIN SUPPORTED gi|119899699|ref|YP_934912.1| 50S ribosomal protein L16 11 1 Op 11 . + CDS 5391 - 5585 213 ## PROTEIN SUPPORTED gi|124268619|ref|YP_001022623.1| 50S ribosomal protein L29P 12 1 Op 12 50/0.000 + CDS 5582 - 5851 301 ## PROTEIN SUPPORTED gi|115350331|ref|YP_772170.1| 30S ribosomal protein S17 + Term 5933 - 5982 8.2 + Prom 5873 - 5932 6.0 13 2 Op 1 57/0.000 + CDS 6096 - 6464 552 ## PROTEIN SUPPORTED gi|171060609|ref|YP_001792958.1| ribosomal protein L14 14 2 Op 2 48/0.000 + CDS 6478 - 6801 368 ## PROTEIN SUPPORTED gi|163859260|ref|YP_001633558.1| 50S ribosomal protein L24 15 2 Op 3 50/0.000 + CDS 6810 - 7349 744 ## PROTEIN SUPPORTED gi|149928562|ref|ZP_01916788.1| 50S ribosomal protein L5 16 2 Op 4 50/0.000 + CDS 7362 - 7667 361 ## PROTEIN SUPPORTED gi|161523442|ref|YP_001578454.1| 30S ribosomal protein S14 17 2 Op 5 55/0.000 + CDS 7684 - 8079 545 ## PROTEIN SUPPORTED gi|121603249|ref|YP_980578.1| ribosomal protein S8 18 2 Op 6 46/0.000 + CDS 8095 - 8628 611 ## PROTEIN SUPPORTED gi|186477572|ref|YP_001859042.1| ribosomal protein L6 19 2 Op 7 56/0.000 + CDS 8644 - 9012 418 ## PROTEIN SUPPORTED gi|171060603|ref|YP_001792952.1| ribosomal protein L18 20 2 Op 8 50/0.000 + CDS 9027 - 9545 640 ## PROTEIN SUPPORTED gi|167587755|ref|ZP_02380143.1| ribosomal protein S5 21 2 Op 9 48/0.000 + CDS 9561 - 9743 215 ## PROTEIN SUPPORTED gi|171060601|ref|YP_001792950.1| ribosomal protein L30 22 2 Op 10 53/0.000 + CDS 9761 - 10195 536 ## PROTEIN SUPPORTED gi|187925597|ref|YP_001897239.1| 50S ribosomal protein L15 23 2 Op 11 3/0.000 + CDS 10226 - 11551 1314 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 11598 - 11645 9.1 + Prom 11602 - 11661 4.3 24 3 Op 1 . + CDS 11786 - 11899 184 ## PROTEIN SUPPORTED gi|16272740|ref|NP_438958.1| 50S ribosomal protein L36 25 3 Op 2 48/0.000 + CDS 11912 - 12277 508 ## PROTEIN SUPPORTED gi|187476571|ref|YP_784595.1| 30S ribosomal protein S13 26 3 Op 3 36/0.000 + CDS 12289 - 12690 519 ## PROTEIN SUPPORTED gi|237747388|ref|ZP_04577868.1| small subunit ribosomal protein S11 27 3 Op 4 26/0.000 + CDS 12796 - 13422 787 ## PROTEIN SUPPORTED gi|73542839|ref|YP_297359.1| 30S ribosomal protein S4 + Term 13498 - 13535 7.1 + Prom 13548 - 13607 2.8 28 4 Op 1 50/0.000 + CDS 13696 - 14703 946 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit + Term 14740 - 14775 3.3 + Prom 14705 - 14764 6.3 29 4 Op 2 . + CDS 14888 - 15292 508 ## PROTEIN SUPPORTED gi|187476575|ref|YP_784599.1| 50S ribosomal protein L17 + Term 15342 - 15386 0.5 30 5 Tu 1 . + CDS 15399 - 15779 176 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Term 15770 - 15821 12.0 31 6 Op 1 1/0.286 - CDS 15841 - 16854 1105 ## COG0113 Delta-aminolevulinic acid dehydratase 32 6 Op 2 . - CDS 16916 - 17584 354 ## COG0218 Predicted GTPase - Prom 17613 - 17672 3.3 33 7 Tu 1 . - CDS 17704 - 18750 737 ## COG0516 IMP dehydrogenase/GMP reductase - Term 18795 - 18834 3.6 34 8 Op 1 . - CDS 18859 - 20262 1249 ## COG0019 Diaminopimelate decarboxylase 35 8 Op 2 . - CDS 20259 - 20465 179 ## - Prom 20542 - 20601 3.0 36 9 Tu 1 . + CDS 20464 - 20778 243 ## COG1965 Protein implicated in iron transport, frataxin homolog + Term 20835 - 20866 4.1 - Term 20818 - 20859 12.0 37 10 Tu 1 . - CDS 20895 - 23267 1904 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 23291 - 23350 8.5 + Prom 23390 - 23449 2.3 38 11 Op 1 . + CDS 23522 - 24016 150 ## COG0824 Predicted thioesterase 39 11 Op 2 23/0.000 + CDS 24029 - 24844 292 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 40 11 Op 3 16/0.000 + CDS 24841 - 25620 874 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 41 11 Op 4 1/0.286 + CDS 25636 - 26106 578 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 42 11 Op 5 5/0.000 + CDS 26109 - 26867 456 ## COG2853 Surface lipoprotein 43 11 Op 6 . + CDS 26878 - 27546 634 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 44 11 Op 7 . + CDS 27633 - 27818 105 ## 45 11 Op 8 . + CDS 27837 - 29090 1075 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Prom 29130 - 29189 1.8 46 12 Op 1 2/0.143 + CDS 29234 - 29569 354 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 47 12 Op 2 16/0.000 + CDS 29585 - 29836 172 ## PROTEIN SUPPORTED gi|90022866|ref|YP_528693.1| ribosomal protein L25 + Term 29851 - 29885 0.4 48 12 Op 3 28/0.000 + CDS 29945 - 30589 667 ## COG1826 Sec-independent protein secretion pathway components 49 12 Op 4 . + CDS 30600 - 31409 848 ## COG0805 Sec-independent protein secretion pathway component TatC + Term 31432 - 31475 7.0 50 13 Tu 1 . + CDS 31964 - 32257 117 ## Gura_0183 RNA-directed DNA polymerase (reverse transcriptase) - Term 32402 - 32439 3.1 51 14 Tu 1 . - CDS 32487 - 33719 721 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 33767 - 33826 3.4 52 15 Tu 1 . + CDS 33749 - 34501 560 ## COG0327 Uncharacterized conserved protein + Prom 34572 - 34631 9.5 53 16 Op 1 . + CDS 34661 - 35395 329 ## PROTEIN SUPPORTED gi|68250027|ref|YP_249139.1| stringent starvation protein A 54 16 Op 2 . + CDS 35461 - 35883 484 ## Veis_3931 stringent starvation protein B + Term 35934 - 36000 30.0 + TRNA 35912 - 35987 90.2 # Thr TGT 0 0 - Term 36136 - 36175 6.7 55 17 Op 1 32/0.000 - CDS 36232 - 37062 425 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 56 17 Op 2 9/0.000 - CDS 37099 - 38175 1002 ## COG0216 Protein chain release factor A - Prom 38227 - 38286 1.7 - Term 38270 - 38320 13.7 57 17 Op 3 . - CDS 38339 - 39628 1012 ## COG0373 Glutamyl-tRNA reductase - Prom 39728 - 39787 2.2 + Prom 39668 - 39727 1.6 58 18 Op 1 . + CDS 39823 - 40344 414 ## Sca_0703 hypothetical protein 59 18 Op 2 . + CDS 40341 - 41099 517 ## COG0603 Predicted PP-loop superfamily ATPase + Term 41263 - 41307 4.1 - TRNA 41338 - 41413 95.0 # Phe GAA 0 0 - TRNA 41497 - 41572 95.0 # Phe GAA 0 0 + Prom 41610 - 41669 3.5 60 19 Tu 1 . + CDS 41765 - 42505 598 ## COG1651 Protein-disulfide isomerase + Term 42527 - 42570 7.0 - Term 42516 - 42555 1.4 61 20 Tu 1 . - CDS 42573 - 43790 670 ## COG2821 Membrane-bound lytic murein transglycosylase 62 21 Op 1 9/0.000 + CDS 43922 - 44611 660 ## COG0036 Pentose-5-phosphate-3-epimerase 63 21 Op 2 . + CDS 44608 - 45312 326 ## COG0546 Predicted phosphatases - Term 45251 - 45288 -0.1 64 22 Tu 1 . - CDS 45384 - 45752 131 ## 65 23 Tu 1 . + CDS 45755 - 46456 409 ## COG0692 Uracil DNA glycosylase 66 24 Tu 1 . - CDS 46453 - 48207 913 ## COG3975 Predicted protease with the C-terminal PDZ domain - Prom 48347 - 48406 3.6 + 5S_RRNA 48627 - 48684 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|319804223|gb|ADMF01000030.1| GENE 1 2 - 517 753 171 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 171 237 407 407 294 82 6e-79 RGTVVTGRVERGVIKVGDEIEIVGIKPTTKTTCTGVEMFRKLLDQGQAGDNVGILLRGTK REEVERGQVLAKPGSITPHTHFKGEVYVLTKDEGGRHTPFFKGYRPQFYFRTTDVTGTIE LPEGVEMVMPGDNITMTVKLICPIAMEQGLRFAIREGGHTVGAGVVAQILE >gi|319804223|gb|ADMF01000030.1| GENE 2 637 - 948 488 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|91785466|ref|YP_560672.1| 30S ribosomal protein S10 [Burkholderia xenovorans LB400] # 1 103 1 103 103 192 92 3e-48 MQSQRIRIRLKAYDYKLIDQSALEIVDTAKRTGAVVRGPVPLPTRIQRFDILRSPHVNKT SRDQLEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVKIKVQ >gi|319804223|gb|ADMF01000030.1| GENE 3 1114 - 1770 779 218 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 [Bordetella petrii DSM 12804] # 1 218 1 227 233 304 67 6e-82 MEKTMSEKLGLVGRKIGMTRIFTDDGVSVPVTVLDVSNNRVTMVKTQDTDGYTAVQVAFG TKKPSRVSKPLAGQFAKAGVEAACTLKEFRIDAEKAAEFKPGQTISVEIFTEGQKVDVTG TTIGKGFAGAIKRHHFSSNRASHGNSVTTRAPGSIGNRQDPGRVFPGKRMAGHLGDVQRT TQNLVVARVDKERQLLLVRGAVPGAKGGEVIVRPAVKA >gi|319804223|gb|ADMF01000030.1| GENE 4 1782 - 2402 689 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|124268626|ref|YP_001022630.1| 50S ribosomal protein L4 [Methylibium petroleiphilum PM1] # 1 206 1 206 206 270 63 2e-71 MELNVLNEQGKTVEAADAVFGREYNEALVHQIVVAFQANARLGTRAQLNRRDVHHSTKKP WRQKGTGRARSGMTSSPLWRSGGRAFPNTPDENFSQKLNKKMFRAGMASIYSKLVADARF VVVETIKADLPKTKAFASQLKTLGLTARTLIIVDESELDDNLILASRNLKDVLVVTPRFA DPLCLIYFDKVVATKAAVAQIQEMLA >gi|319804223|gb|ADMF01000030.1| GENE 5 2399 - 2698 314 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187476541|ref|YP_784565.1| 50S ribosomal protein L23 [Bordetella avium 197N] # 1 96 1 96 98 125 64 5e-28 MNQERLMKVLVGPIVSEKSTMIGEKHNQYSFVVVPDAKKSEVKAAVELLFKVQVSSVQIL NLKGKQKRFGRFMGKRNDVRKAYVSLAKDQEIKFEQEVM >gi|319804223|gb|ADMF01000030.1| GENE 6 2698 - 3525 1156 275 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|209521382|ref|ZP_03270095.1| ribosomal protein L2 [Burkholderia sp. H160] # 1 275 1 275 275 449 76 1e-125 MALVKLKPTSPGRRHAVKVVNKELHKGKPWAALVEKKNRGCGRNNDGHITCRHKGGGAKR AYRIIDFKRDKDGIPARVERIEYDPNRSANIALVLYADGERRYIIAPKGMTVGQEIFNGP ESPIKAGNTLPLRNIPVGSTIHCIELLPGKGAQLVRAAGTFGQLIAREGEYAQVRLRSGE VRRVLIECRATIGTVGNEENSLRELGKAGAKRWRGVRPTVRGVAMNPVDHPHGGGEGKTG TGRAPVTPWGQLTKGYRTRNSKRTDSMIVQRRNSK >gi|319804223|gb|ADMF01000030.1| GENE 7 3538 - 3816 405 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163859269|ref|YP_001633567.1| 30S ribosomal protein S19 [Bordetella petrii DSM 12804] # 1 89 1 88 91 160 87 1e-38 MSRSLKKGPFVDGHLMKKVETAQATRDKRPLKTWSRRSTILPEFIGLTIAVHNGRQHVPV YINENMVGHKLGEFAHTRTFKGHAAGDKKVGK >gi|319804223|gb|ADMF01000030.1| GENE 8 3817 - 4152 398 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|171060664|ref|YP_001793013.1| ribosomal protein L22 [Leptothrix cholodnii SP-6] # 1 109 1 109 109 157 74 9e-38 METTAIVRGVRLSAQKGRLVADLIRGQQVGRALSILEFTQKRAAGIVRKCLESAIANAEH NFGADIDALVVTKIHVEKAATLRRFGARAKGRGTRINKQTSHIYITVADGE >gi|319804223|gb|ADMF01000030.1| GENE 9 4173 - 4955 916 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187476545|ref|YP_784569.1| 30S ribosomal protein S3 [Bordetella avium 197N] # 1 260 1 264 264 357 68 7e-98 MGQKINPTGFRLPVTRNWTSRWYANGRDYPNTLQEDLKVRSFLLKKLRNASVARVLIERP ANNARITIFTSRPGIVIGKQGADIEALKTEVQKMMGVPVHVNIEEVRRPELDAQLIADGI TQQLEKRVMFRRAMKRAMQNAMRLGALGIKVQSSGRLNGADIARDEWYREGRVPLQTLRA NIDYATSEAHTTYGVVGVKVWVYKGDNFGAEEPVEAPREDRRGRRGDRPGKPGARRPNGG RRNDMKQDRAPRKPAAKDGE >gi|319804223|gb|ADMF01000030.1| GENE 10 4958 - 5374 609 138 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119899699|ref|YP_934912.1| 50S ribosomal protein L16 [Azoarcus sp. BH72] # 1 137 1 137 137 239 82 3e-62 MLQPNRRKYRKDQKGRNYGLATRGANVSFGEFGLKTLERGRITARQIEAARRAITRHIKR GGRVWIRIFPDKPISSKPAEVRMGNGKGNPEYWVALVQPGRVLYEMDGVEESLAREAFAL AAAKLPVKTTFVVRQVGM >gi|319804223|gb|ADMF01000030.1| GENE 11 5391 - 5585 213 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|124268619|ref|YP_001022623.1| 50S ribosomal protein L29P [Methylibium petroleiphilum PM1] # 1 60 1 60 66 86 75 2e-16 MNAKELRAKDEAALKQELQDLLNTHFKLRMQKATQQLQNTASLRQTRRDIARVRTILTEK ATTK >gi|319804223|gb|ADMF01000030.1| GENE 12 5582 - 5851 301 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|115350331|ref|YP_772170.1| 30S ribosomal protein S17 [Burkholderia ambifaria AMMD] # 1 89 1 90 90 120 62 2e-26 MTETTKEALTRTLDGVVTSNKMDKTVTVLVERKVKHPLYGKYVVKSKKYHVHDELGCGEG DKVEIKETKPISKTVSWVVTKILEKAEVL >gi|319804223|gb|ADMF01000030.1| GENE 13 6096 - 6464 552 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|171060609|ref|YP_001792958.1| ribosomal protein L14 [Leptothrix cholodnii SP-6] # 1 122 1 122 122 217 90 1e-55 MIQMQSRLDVADNTGARSVMCIKVLGGSKRRYANIGDVIKVTVKEAAPRGRVKKGEVYNA VVVRTAHGVRRADGSTVTFDGNAAVLLNSKLEPIGTRIFGPVTRELRTEQFMKIVSLAPE VI >gi|319804223|gb|ADMF01000030.1| GENE 14 6478 - 6801 368 107 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163859260|ref|YP_001633558.1| 50S ribosomal protein L24 [Bordetella petrii DSM 12804] # 1 106 1 106 106 146 68 3e-34 MQRIIKGDQVVVITGRDRGTKGTVLSRVDDRHIIVEGVNVVKKAVRPNPALGVEGGIVDK TLPIDQSNVMLVNPETGKGERVGFKEVDGKKVRVFKSNGAVVGAKAE >gi|319804223|gb|ADMF01000030.1| GENE 15 6810 - 7349 744 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149928562|ref|ZP_01916788.1| 50S ribosomal protein L5 [Limnobacter sp. MED105] # 1 179 1 179 179 291 75 7e-78 MSRFSSLYHDTIVPELMKKFGYKTVMQVPRITKITLNMGVGEAVNDKKFIEYAVGDMTKI AGQKPIVTHTRKAIANFKIRENQAIGCMVTLRGERMFDFLDRLVTVAFPRVRDFRGVSGR AFDGRGNYNIGLKEQIIFPEIEYDKIDSIRGMNISITTTAKTDEEAKALLAGFSFPFRN >gi|319804223|gb|ADMF01000030.1| GENE 16 7362 - 7667 361 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161523442|ref|YP_001578454.1| 30S ribosomal protein S14 [Burkholderia multivorans ATCC 17616] # 1 101 1 101 101 143 71 2e-33 MAKLALINREAKRRATVAKFAAKRAALKAIINDASRSMDERLDARAQLEKLPRNASPVRL RNRCAITGRPRGNFRKFGLCREMIRDAAMRGDIPGLQKASW >gi|319804223|gb|ADMF01000030.1| GENE 17 7684 - 8079 545 131 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121603249|ref|YP_980578.1| ribosomal protein S8 [Polaromonas naphthalenivorans CJ2] # 1 131 1 131 131 214 77 8e-55 MSMSDPIADMLTRIRNGQMVDKAAVVMPSSKLKVAIAKVLKDEGYIENYEVAANNGKPEL NVTLKYYAGRPVIERLERVSRPGLRIYKNHDSIPQVMNGLGIAIVSTPKGVMTDRAARAA GVGGEVICYVA >gi|319804223|gb|ADMF01000030.1| GENE 18 8095 - 8628 611 177 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|186477572|ref|YP_001859042.1| ribosomal protein L6 [Burkholderia phymatum STM815] # 1 177 1 176 176 239 66 2e-62 MSRIAKIPVTIAKGVTVAITEADVTVKGPVGEVKMHILPLVKVTEENGHLHFEQLDESRD ANMNVGTMRALVNDMVKGCSAGFEKRLTLVGVGFRAQAQGDKLNLQLGFSHPIVHHMPAG IKVETPSQTEIVIKGADKQKVGQTAAEIRAYRAPEPYKGKGVRYANEHVVIKETKKK >gi|319804223|gb|ADMF01000030.1| GENE 19 8644 - 9012 418 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|171060603|ref|YP_001792952.1| ribosomal protein L18 [Leptothrix cholodnii SP-6] # 1 122 1 121 121 165 70 4e-40 MINKKQSRLRRARATRARILLQKVDRLTVHRTNLHIYASIISADNGRTLVSASTVEPEVR AQLASVSGRGGNVAAAKIVGARIAEKAKAAGIESCAFDRSGYRFHGRVAALAEAAREAGL KF >gi|319804223|gb|ADMF01000030.1| GENE 20 9027 - 9545 640 172 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167587755|ref|ZP_02380143.1| ribosomal protein S5 [Burkholderia ubonensis Bu] # 1 172 1 172 172 251 72 8e-66 MAKVQAKNAVEEQDDGLREKMIAVNRVTKVVKGGRILAFAALTVVGDGDGSIGMGTGKSR EVPQSVSKAMERARHTMKRVPLKNGTLHHAVEGRHGASRVIMMPAPEGSGVIAGGPMRAV CDAVGIRNVVAKAYGSTNPYNLVRATLNALDNLRSPAEIAAKRGKSVEELLG >gi|319804223|gb|ADMF01000030.1| GENE 21 9561 - 9743 215 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|171060601|ref|YP_001792950.1| ribosomal protein L30 [Leptothrix cholodnii SP-6] # 1 59 1 59 60 87 71 1e-16 MSEKKTIKVTLVKSPIGTNADHRATVLGLGLKKIRQTRELEDTPAVRGMINKIAYLVRVE >gi|319804223|gb|ADMF01000030.1| GENE 22 9761 - 10195 536 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187925597|ref|YP_001897239.1| 50S ribosomal protein L15 [Burkholderia phytofirmans PsJN] # 1 144 1 144 144 211 70 9e-54 MRLNTIQPAEGSKHAHHRVGRGVGSGWGKTAGRGHKGQKSRAGGFHKVGFEGGQMPMYRR LPKRGFTSLSRKFVEVVRLSDLERLGLEEVDLSVLKEAGVVSTLALNARVILSGAITRKV TVRGLGVTKGARAAIEAAGGSIAE >gi|319804223|gb|ADMF01000030.1| GENE 23 10226 - 11551 1314 441 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 15 437 19 444 447 510 58 1e-144 MATSPSSKQQSGLSKYGDLKGRLIFLALALVVYRIGAHVPVPGIDPDMLNQLFNQQQGGI LGLFNMFSGGALSRFSVFALGIMPYISASIIFQMLSYVLPSLEAIRKEGEQGRRKITQYT RYGTLALGLFQGFGIAVALETQPGLVIDPGFLFRITTTVSLLTGTMFLMWLGEQITERGL GNGISIIIFAGIVAGLPNGASGLFQLVSTGAISPLAAIFVIVIVLGVTAFCVFVERGQRR ITVNYAKRQVGNRIYGGQSSYLPLKMNMSGVIPPIFASSLILFPATLAGWFTSGDSTRWI RDLAAALSPGQPLYTLLYAALIVFFAYFYTALVFNPKETAENLKKSGAFIPGIRPGEQTA RYIDRVLLRLTLGGAIYLVFVCLVPEFLNLRFNVPFYFGGTSLLIVVVVTMDFMSQVQAY MMSHQYENLLRKTSFRGLTRK >gi|319804223|gb|ADMF01000030.1| GENE 24 11786 - 11899 184 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16272740|ref|NP_438958.1| 50S ribosomal protein L36 [Haemophilus influenzae Rd KW20] # 1 37 1 37 37 75 86 6e-13 MKVRASIKKMCRNCKIIKRKGVVRVICSDPRHKQRQG >gi|319804223|gb|ADMF01000030.1| GENE 25 11912 - 12277 508 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187476571|ref|YP_784595.1| 30S ribosomal protein S13 [Bordetella avium 197N] # 1 121 1 121 121 200 80 2e-50 MARIAGINIPPQQHAEIGLTAIYGIGRSRSRLILEQCGIPCTKKVQDLTDAELERIRDAV SKFTVEGDLRREVQLSIKRLIDLGTYRGMRHRRGLPCRGQRTRTNARTRKGPRKVGVTLK K >gi|319804223|gb|ADMF01000030.1| GENE 26 12289 - 12690 519 133 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|237747388|ref|ZP_04577868.1| small subunit ribosomal protein S11 [Oxalobacter formigenes HOxBLS] # 1 133 1 133 133 204 73 8e-52 MAGNSKNASARGRKKVRKVVTEGIAHVHASFNNTIITITDRQGNAIAASSSGAQGFKGSR KSTPFAAQVAADVAGKIAIEHGLKNVEVRIWGPGPGRESSVRALNALGIRVTSIQDVTPI PHNGVRPSKRRRV >gi|319804223|gb|ADMF01000030.1| GENE 27 12796 - 13422 787 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|73542839|ref|YP_297359.1| 30S ribosomal protein S4 [Ralstonia eutropha JMP134] # 1 208 1 207 207 307 75 7e-83 MARYLGPKLKLSRREGIDLNLKSARRSFESKVKDVGSKPGQHGKISGARTSDYGNQMRET QKAKRMYGVLERQFRRYFAEASRLRGNTGEKLLQLLESRLDNVVYRMGFGSTRAESRQLV SHGAIEVNGRKVNIPSYSVRAGDVITIREKAQKQVRIAEALELAQQNGFPAWVEVDAKKF TGTFKNAPARDEIAPEINEALIIERYSR >gi|319804223|gb|ADMF01000030.1| GENE 28 13696 - 14703 946 335 aa, chain + ## HITS:1 COG:RSc2993 KEGG:ns NR:ns ## COG: RSc2993 COG0202 # Protein_GI_number: 17547712 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Ralstonia solanacearum # 4 331 3 324 326 436 70.0 1e-122 MANTALLKPTSVDVSVDESNPNRAVITLEPFERGYGHTLGNALRRILLSSMVGFAPTEAQ ITGIVHEYSQIDGVLEDVVDILLNLKGVVFKLEKRDEVTIMLRKDGDGVVTAADFDLPHD VTVLNPDHVIAHLSGGRLEMQVKIEKGRGYQPGDVRAFRDDYSKSSIGRIIMDASFSPIL RVAYQVMAARVAQRTDLDKLEMTIETNGAIGPEEALRESVRILQDQLAVFGAIHPEQGTD GIKPEDAANNPPPLDPILLRPVDDLELTVRSANCLKAESIYFIGDLIQRTENELLKTPNL GRKSLNEIKEVLAAHGLTLGSKLENWPPAGVNVER >gi|319804223|gb|ADMF01000030.1| GENE 29 14888 - 15292 508 134 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187476575|ref|YP_784599.1| 50S ribosomal protein L17 [Bordetella avium 197N] # 1 129 1 125 131 200 78 2e-50 MRHHHGYRKLNRTSAHRAAMLRNMACSLITHEAIRTTLPKAKELRRVVEPLITLAKEPTV ANKRLAFNRLRDRDVVVKLFNQVGPRFANRQGGYTRILKMGFRNGDNAPMAYMELVEHAV AVEEVPAAEEAKAE >gi|319804223|gb|ADMF01000030.1| GENE 30 15399 - 15779 176 126 aa, chain + ## HITS:1 COG:NMA1348 KEGG:ns NR:ns ## COG: NMA1348 COG1188 # Protein_GI_number: 15794270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Neisseria meningitidis Z2491 # 4 123 10 129 133 95 45.0 2e-20 MDEMRIDKWLWAARFFKTRSAAQEEVSLGRVLVDGSRAKPSRSIRPGNLLEIRRGEEVFK VYVEGLSNTRGPAAVAQKLYRETQESKTMREARAAAAKIAFEPSVVRKGRPTKKEGRELR RFKDSL >gi|319804223|gb|ADMF01000030.1| GENE 31 15841 - 16854 1105 337 aa, chain - ## HITS:1 COG:RSc2989 KEGG:ns NR:ns ## COG: RSc2989 COG0113 # Protein_GI_number: 17547708 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Ralstonia solanacearum # 4 332 2 330 331 444 65.0 1e-124 MQTLGAYPMVRMRRMRHDDFSRRLMRENVVTPNDLILPVFVMEGKARREPVPSMPGVDRL TIDELLKVAGECVELGIPMIALFPHIEDALKTPDGREAANPDGLIPRSVKALKAAYPQLG VMCDVALDPYTTHGQDGLIDETGYILNDETIEMLVRQVMAQAKAGADVVAPSDMMDGRIG IIRKALEDEGLIHTRIMAYSAKYASSYYGPFRDAVGSASNLGRSNKAVYQQDPANGNEAL WEVGLDLAEGADMVMVKPGVPYLDVLWRVKQEFGAPTFAYHVSGEYAMIKFAAAAGAIDE KKITFETMVCFKRAGADGILTYCALDVARWIKEGYNY >gi|319804223|gb|ADMF01000030.1| GENE 32 16916 - 17584 354 222 aa, chain - ## HITS:1 COG:NMB1806 KEGG:ns NR:ns ## COG: NMB1806 COG0218 # Protein_GI_number: 15677644 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis MC58 # 1 206 3 198 211 167 44.0 1e-41 MSLFDSARFQISAAKLSGLPTELEPEIAFAGRSNAGKSTTINVLTRQTRLAFASKTPGRT QLVNFFELSRKIDGGRNRVVVGRLVDLPGYGFAKANEAVRSSWSDLVGGYIAGRRQLRGL VIVMDSRRPFMPTDEWLIEFMKQRPEVKMLWLLNKCDQIKTQERRTTLRAVEKRAAEFGD RVTVQFFSGLKREGVDELAKTLETWLNPATTAMPPTPAAAKQ >gi|319804223|gb|ADMF01000030.1| GENE 33 17704 - 18750 737 348 aa, chain - ## HITS:1 COG:STM0141 KEGG:ns NR:ns ## COG: STM0141 COG0516 # Protein_GI_number: 16763531 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Salmonella typhimurium LT2 # 1 344 1 344 347 444 65.0 1e-124 MHIENTLRLDFKDVLIRPKRSTLTSRSEVDITREFKFRHSPIRYKAIPIIAANMDTTGTF EIARALGRHDLSTALCKHYAVDEYVAFFSELEAKHTAFYSLGITEADWEKFLIVRSRCPK NAIQYLCIDVANGYTETFVSFVKKAREACPDSVIMAGNVVTGDMTEELILAGADIVKVGI GPGSVCTTRKMTGVGYPQLSAIIECADAAHGLSGRICADGGCTVPGDIAKAFGGGADFVM LGGMLAGHDESAGELVEVDGKPYKRFYGMSSKNAMDKYAGGVAKYRAAEGKSVLIPARGP VEDTVQAILGGVRSACTYVGARRLKELTMRTTFIRCSMQTNDIYGQAL >gi|319804223|gb|ADMF01000030.1| GENE 34 18859 - 20262 1249 467 aa, chain - ## HITS:1 COG:PA5277 KEGG:ns NR:ns ## COG: PA5277 COG0019 # Protein_GI_number: 15600470 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Pseudomonas aeruginosa # 19 432 6 410 415 382 49.0 1e-106 MTAETHIRPDSLSNGTGFYRNASNELCCEDTLLSDIAHRWGTPTYVYSRAAITERWNAYE TAFGTAPHQICYAVKAASTKGILEVLAALGAGFDCVSGGEILRVLAAGGDPKKIVFSGVA KTPADIAFALTAGIKCFNIESPAELDRIANTARNLGLKAHISVRVNPNIDAHVDHHVATG LGDSKFGVKLTDVIALYQKAAELKEIEIEGISCHIGSLVESTVPYMSEIEVLSVFVNELL DRGIALKHFDIGGGAGVAYKADEKTLEPSELIPAVVAQIRSLVKIPDIEILIEPGRSIIA QAGVLLTRVEYLKSGLFERNFCVVDASMTELVRPAMYGSHHEIEPVSPRSDIEPERLNIV GGVCESSDILGSDRELAVAPGDLLAIRTAGAYGMSMASTYNSRPLPMEVLVDGAAIRPLR RRMTALDLLSDEYDLGLVQACIPADEVKTLFTQAQTYSDHPEDHDNK >gi|319804223|gb|ADMF01000030.1| GENE 35 20259 - 20465 179 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTPTHLKTRRTTGNQRSIRAKAARTVVLAAAAVQIMLALSGCGLKGDLYMPNDEPMPTAP SHSSEMAR >gi|319804223|gb|ADMF01000030.1| GENE 36 20464 - 20778 243 104 aa, chain + ## HITS:1 COG:NMB1978 KEGG:ns NR:ns ## COG: NMB1978 COG1965 # Protein_GI_number: 15677807 # Func_class: P Inorganic ion transport and metabolism # Function: Protein implicated in iron transport, frataxin homolog # Organism: Neisseria meningitidis MC58 # 6 99 2 103 107 79 42.0 2e-15 MVKLSMTETEFLERADAEINRLQDLIENDYEDADCTRSGNVLSIELESGAQIVVNIQTPM QEIWLASHLGGMHFEPTTQGWINPRDGRTLEASARQAVEALLAH >gi|319804223|gb|ADMF01000030.1| GENE 37 20895 - 23267 1904 790 aa, chain - ## HITS:1 COG:RSc2976 KEGG:ns NR:ns ## COG: RSc2976 COG5009 # Protein_GI_number: 17547695 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Ralstonia solanacearum # 50 768 54 756 801 749 54.0 0 MTAVQKKRPAQRSGGGLWSAVKWTIAIGAAGALSGVFLLIFVFAYIYQQLPSIDVLTDYR PKVPLRVWSAEGRLIGEFGEERRDFVRIADVPKHVKDAILCAEDDGFYEHHGIEVMGIAR AAIINVLTGRRGQGGSTITMQVARNFFLTTERTYTRKLYEIAMSFKIENELTKDQILEIY MNQIYLGQRAYGFEAAAKTYFGRPLAEISVGEAATIAGLPVAPSAYNPIVNPTRATMRRN YVLRRMYDLGRIDELTYQTEKSLPMEVRRAVEPNAVKTSERADSDVVTAHYAAELARMLV YDIFGNETYSRGLNVYTTIRIDQQRAAVESVRRHLITYDRRYGYRGPEDKIELGSADNQP KAIRRALATTASSPFMLPAVVLEANPKKIVAAISPNESVELDAESLKFGRRHLAAKPAKG IEPIVPGSIIRVMHPLSGKDADQKWTLAQVPKVETAFVSANFMTGAVEALVGGFDFNLNM FNHVTQAWRQPGSSFKPFIYSAALDKGFTATTVINDAPIMIDPKLTGNKLWEPKNYDGKF AGPMQLHSALEQSKNLVSIRILQSITPAYAQQYIARFGFAPKDHPANLPMALGAGSVTPW QMLAGYMVFANGGYRVQPYLIDRVTDAEGATLMQATNRTAGDASIRAIDERNAFVMTSLL QRVAEYGTARRAVRELKRHDIAGKTGTSNDSQDAWFCGFAGSTAAVGWMGYDTPKPLGSR ETGGGLVLPIWIDYMRIALKNEPETLRVQPDSVVERDGLYFYRDPVQGGPGEFGMTPDTA VQDLVRDQIF >gi|319804223|gb|ADMF01000030.1| GENE 38 23522 - 24016 150 164 aa, chain + ## HITS:1 COG:CC2506 KEGG:ns NR:ns ## COG: CC2506 COG0824 # Protein_GI_number: 16126745 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Caulobacter vibrioides # 8 134 12 136 139 63 36.0 1e-10 MTDQRRIYQEVFTVADASIDVQGHVNNREYLRWMEGVATRHAALLGWDFETLKVRNRSWV AREHWIEYLQPCFAGDELTITTWVQSLRGPASLRRYVMQREGMPVMAGATEWVFIDLARR RPAFLDPDIEATFTLIEPGNAELKALGVDRSPRWKPAPSLLGED >gi|319804223|gb|ADMF01000030.1| GENE 39 24029 - 24844 292 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 219 1 219 223 117 33 2e-25 MKDFLSIKNVTFGYGSRTILEDVSLRFGSGQVVAIMGGSGMGKTTLLKLIGGLLTPQAGE ICIAGCRVDTNDQKALYRLRRRMGMLFQFGALFTDLSVFDNVAFPIREQTNLDEETVRDL VLMKLNAVGLRGAAPLMPSEISGGMARRVALARTIALDPALILYDEPFAGLDPISMGVTA RLIRSLNDALGATSLMVTHDVEQTFEIADYVYMISSAKVAAQGTPAALRASDDPFVRQFI NGLPDGPVHFQYPAPDYATDLGFPNHKGDQA >gi|319804223|gb|ADMF01000030.1| GENE 40 24841 - 25620 874 259 aa, chain + ## HITS:1 COG:RSc2961 KEGG:ns NR:ns ## COG: RSc2961 COG0767 # Protein_GI_number: 17547680 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Ralstonia solanacearum # 5 257 1 255 255 261 63.0 1e-69 MIVNLLAQLGSWVLSLLSSVGRFGIFSGRVLARLGGAGLSPIISQIHFIGNYSLLIISVS GLFVGFVLGLQGYYVLVTYGSEEALGTLVALSLVRELGPVVTALLFAGRAGTALTAEIGL MRSGEQLAAMEMMGVDPIRRVFAPRFIGGFISMPILALIFSAVGIIGAWMVGVLLIGTDN GAFWSQMESAVDVFSDICNGFVKSVVFGAAVTLIALYQGWASRPTPDGVARATTTTVVVS SLLVLGLDFIMTAWMFTTV >gi|319804223|gb|ADMF01000030.1| GENE 41 25636 - 26106 578 156 aa, chain + ## HITS:1 COG:RSc2960 KEGG:ns NR:ns ## COG: RSc2960 COG1463 # Protein_GI_number: 17547679 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Ralstonia solanacearum # 7 150 6 148 173 179 68.0 3e-45 MHSNRKLEAAVGLFIVLGFLAALFMALQAANLGSFTFGQKTYAVTADFDNIGGLKARAAV KSAGVVVGRVRSIVFDPETFQARVVMDMDARYPFPDDSSAKILTAGLLGEQYVGIEAGAD EANLVEGSKIRRTQSAVVLENLISQFLYSKAEDGGK >gi|319804223|gb|ADMF01000030.1| GENE 42 26109 - 26867 456 252 aa, chain + ## HITS:1 COG:RSc2959 KEGG:ns NR:ns ## COG: RSc2959 COG2853 # Protein_GI_number: 17547678 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Ralstonia solanacearum # 10 239 16 240 269 180 45.0 2e-45 MQKLLTSLAGTTVAAVLLAGCAQVPPNAGENPSDPYERVNRNIYAFNDSIDRALFRPVAE TYVEWTPEWVRTRVSNVVDNLGDPGNAVNNTLQGKVDRGIESLMRFLVNSTFGIAGIFDV ADEIGLKRHSEDFGQTLGVWGVGSGSYLVLPILGPSSTRDWTRWPVSIATDPLTYALWNE EWYWSAGATTVALVDGRARLLKLDALRASTIDEYAAVRDAYLAKRASDVRDGAVEDEAEE LQMLTPLPVDNE >gi|319804223|gb|ADMF01000030.1| GENE 43 26878 - 27546 634 222 aa, chain + ## HITS:1 COG:RSc2958 KEGG:ns NR:ns ## COG: RSc2958 COG2854 # Protein_GI_number: 17547677 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Ralstonia solanacearum # 47 213 42 207 211 134 38.0 2e-31 MQRRTLMIAGVALTSVAFMPAALAADGLPYDAKGDPFAFVVDLSNAVLDRIRSSEALKSG NVDSLRKLVDEIVLPATDFTMMTRMTVGPKWRTATAEQKKALESGFETLLLRVYAGGLTA VKDQKCELRPTRVKKAQPEMVIRTLLKSSGAEPIALDYRIYRAKDDTWKIVDVNIEGIWM VENYRSQFASVLSQDGVEGLIKLFNEKGEELARQVKNSGGKA >gi|319804223|gb|ADMF01000030.1| GENE 44 27633 - 27818 105 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLAGVSGGDSSLLSVLLSGRRIAPDLQILNLSPALAQLAQLYGVADLLGLPKSASETEV N >gi|319804223|gb|ADMF01000030.1| GENE 45 27837 - 29090 1075 417 aa, chain + ## HITS:1 COG:RSc2953 KEGG:ns NR:ns ## COG: RSc2953 COG0766 # Protein_GI_number: 17547672 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Ralstonia solanacearum # 1 416 1 420 421 481 64.0 1e-135 MEKLKIRGARRLVGEVRVSGAKNAALPILAASLLTAGDLELKNVPDLADVRTMLKLLAGM GVKVERSGSNVTLNAGAITSTEAPYDLVKTMRASILTLCPLTARFGAARVSLPGGCAIGA RPVDQHIKGLRALGAAVEIDHGYVVVESARLKAAHIATDMVTVTGTENLMMAAVLAEGTT VIENAAREPEVVDLANCLNAMGAKISGAGTPTLVIEGVERLHGAKHAVIADRIEAGSFLC AAAATDGDVLVANCVPGDLEAVILKLREMGAMVDVGSDWVRLKMAGRPKPVKIRTTPHPG FPTDMQAQFMAVLARADGVSEITETIFENRFMHVPELARLGASINVVGRTAVVKGVPRLE GAAVMATDLRASASLVIAALAANGESTVDRLYHLDRGYERMEEKFRGLGADIERVRS >gi|319804223|gb|ADMF01000030.1| GENE 46 29234 - 29569 354 111 aa, chain + ## HITS:1 COG:PA0656 KEGG:ns NR:ns ## COG: PA0656 COG0537 # Protein_GI_number: 15595853 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Pseudomonas aeruginosa # 3 104 2 103 112 132 56.0 2e-31 MSDCIFCKIAAGDIPSSKIYEDDDVIAFKDIHPQAPVHFLIVPKKHIVSLAETQSADEPL LGKMLGLVRKLAKEQGCDNGFRVIINTGRDGGQEVPHLHIHVLGGPRPWKN >gi|319804223|gb|ADMF01000030.1| GENE 47 29585 - 29836 172 83 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022866|ref|YP_528693.1| ribosomal protein L25 [Saccharophagus degradans 2-40] # 1 83 3 82 83 70 46 1e-11 MGSLSVWHWLIVLAIVVLVFGTGKLKNMGKDLGGAIKGFKEGMREADDKPTDQTAAKEIP QQQTAEAKQADTIDVDAKEKPKA >gi|319804223|gb|ADMF01000030.1| GENE 48 29945 - 30589 667 214 aa, chain + ## HITS:1 COG:NMB0600 KEGG:ns NR:ns ## COG: NMB0600 COG1826 # Protein_GI_number: 15676505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis MC58 # 1 92 1 92 228 89 47.0 6e-18 MFDFGFSEMIIVGVVALVVLGPERLPVVARTAGEWIGKAQRFVAQVKSDIDRETELSELK KIQDEAKALANDVKSTVEKTAGEIETNVSSVAGEAQSAVKDAQSAVESAKADAAETVSTK TTGVSADDISSVYGWGDANTDSEIMTPASAYGGWSEPKVFPKRYHSGPSVDDLAAEIERL RRELGMREANMGGASGRRRALAPRAKNLRTRIYR >gi|319804223|gb|ADMF01000030.1| GENE 49 30600 - 31409 848 269 aa, chain + ## HITS:1 COG:NMB0599 KEGG:ns NR:ns ## COG: NMB0599 COG0805 # Protein_GI_number: 15676504 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Neisseria meningitidis MC58 # 18 242 11 235 256 251 58.0 1e-66 MSQDNPQLEAPDDPANEQPLVAHLIELRNRLMKSVIAIIVVFACLSPFMKQIFDFLSQPL MVALPQGAKLLATGVVAPFFVPLKVTLFVAFLIALPVVLYQAWAYIAPALYRSEKRLAFP ILISSIVMFAIGMAYCYFIVFRMVFQFIAGFSPDSVNFAPDIDSYFSFVLTMFLAFGMTF EVPIIVVVLNRVGIATYSKLTKARPYVIVGAFVLAAIFTPPDALSQILLALPLVILYQVG IWCVKIAGVSDEEVEELKEKKKEEMAKGI >gi|319804223|gb|ADMF01000030.1| GENE 50 31964 - 32257 117 97 aa, chain + ## HITS:1 COG:no KEGG:Gura_0183 NR:ns ## KEGG: Gura_0183 # Name: not_defined # Def: RNA-directed DNA polymerase (reverse transcriptase) # Organism: G.uraniumreducens # Pathway: not_defined # 21 95 342 416 467 75 50.0 8e-13 MGTSGAPRVAKASFARLMYKLKPILRRGRGRSLLGTIQALTMILRGWRTYYALDDRKEIF ELIDIHIRRHLRKLIWRAWKRPKTRERELRRRGLSSE >gi|319804223|gb|ADMF01000030.1| GENE 51 32487 - 33719 721 410 aa, chain - ## HITS:1 COG:RSc2932 KEGG:ns NR:ns ## COG: RSc2932 COG0265 # Protein_GI_number: 17547651 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Ralstonia solanacearum # 22 387 2 385 403 256 42.0 8e-68 MAIPAQEASVTQSTKQNHPGTLRRLWLLFAQTATVIMGVALGLKAAGILPDDASQKVDPL FLELSAISRQSDFSGAVERAAPSVVNIFTRKSAAAHSSDAIGVNWDGDPETHMKALGSGV IVSEHGDILTNYHVVDGISNLSVALADGRTFEAKLRGKDVETDLALLQVKAEGLTAAVLG DASKLKVGQTVLAIGNPFDVGQTVTAGIISALGRHGFGLNSYEDFIQTDAAINQGNSGGA LINLQGELIGINSAIFSPDRTEAFVGIGFAIPSSIINNVLPALLAGRNIERGYLGLVPRQ LSQELAQDLSLGVSSGVLIKRVLPNSPAAHADLRSFDVILEVSGTPVRRANQLLQIIARL KPGTPVEVKILRSGRVLTKRILPTKRPRGSLEKEALVPPPTIEGVDMSGS >gi|319804223|gb|ADMF01000030.1| GENE 52 33749 - 34501 560 250 aa, chain + ## HITS:1 COG:RSc2931 KEGG:ns NR:ns ## COG: RSc2931 COG0327 # Protein_GI_number: 17547650 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 250 1 248 248 213 48.0 2e-55 MRIQELTEYLDTYLRAGEFHDYAPNGLQVEGTREVKHIVLGVSASLGLIDEAARRGADVV LVHHGWFWKGESPRIAGVKGCRIRHLMQSGMHLVGYHLPLDAHETVGNNAELARVLGLTI ESRHGEYGLLHVGEIISGAMLAADFAQRVNAALGRAPLLVGDAQKIVRRIGWCSGAAQDE LAAAAALGCDLYLSGEIREHTTFEAIESGVPYLAAGHTATEQFGIQALGRHLQKVFPGLE IEYVPQDNPV >gi|319804223|gb|ADMF01000030.1| GENE 53 34661 - 35395 329 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|68250027|ref|YP_249139.1| stringent starvation protein A [Haemophilus influenzae 86-028NP] # 38 238 9 203 212 131 35 9e-30 MCWGGFFLWSPQCSTQTSRAIHCACSTNGPVTEGYAHSMMILYSGPSCPFSHMSRIVLNE KGCEFEIKSIDYEGVGPSEADLAVVKMSPYGELPVLTERDLFLYDVYVVNEYIDERFPHP QLMPSDPVGRARTRLFLHVLARELFPHVRTLENSAAPAEKKAHARKRLSESLGVLAYRVG DTKFLLSDEFGMVDVVLAPILWRVPFWGIELPSTAAKLEIYAQRLFARQSFIDSMTPAER SMRQ >gi|319804223|gb|ADMF01000030.1| GENE 54 35461 - 35883 484 140 aa, chain + ## HITS:1 COG:no KEGG:Veis_3931 NR:ns ## KEGG: Veis_3931 # Name: not_defined # Def: stringent starvation protein B # Organism: V.eiseniae # Pathway: not_defined # 7 110 8 108 176 68 38.0 8e-11 MTQPLRSIRAKLIESVREYCAEHFLRPYIWVDVDDACLVPFEYVTEGMIILDVDDEAVRG LELTDELLTFEARFGDSVEPMQVVVPLNRIVHAAPAETPEEGASFMVKPTHPDLRAEILG EEKPAETVSAPQPHRPMRIK >gi|319804223|gb|ADMF01000030.1| GENE 55 36232 - 37062 425 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 8 275 17 291 294 168 41 6e-41 MADVQIGPSIRAQLGKASPVIGRFEAMILLGFVIGKPREYLIAHDEAELTEDQILQFDML VDMRAAGTPVPYLTGSQEFFGRHFHVTDAVLIPRPDTEVLVEQALLVVAGNPKVLDLGTG SGCIGITLALEISGAQVTATDASEAALEIARGNAAELAAKVEFREGFWWDALVPNSQFDL IVSNPPYIRPDDDHLRNLEYEPLQALTDGINGLECLQAIADGAIAHLTPGGWLLLEHGYD QGAEVRAMLEQAGFAAVRTKKDYGGNDRVTMGRRAK >gi|319804223|gb|ADMF01000030.1| GENE 56 37099 - 38175 1002 358 aa, chain - ## HITS:1 COG:NMB1686 KEGG:ns NR:ns ## COG: NMB1686 COG0216 # Protein_GI_number: 15677534 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Neisseria meningitidis MC58 # 5 358 4 357 358 442 69.0 1e-124 MLTDNVRSKLSALSRRLEEIDRMLAAPETAADMNLFRDLSRERGEIEPIVGRLHAYERAE SDLAAAQELAADPEMKAFAAEESAAATHELERIEQELRIALLPKDPNDDRNIFLEIRAGT GGDESALFAGDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRIIGRGAYSKLKFES GGHRVQRVPATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDVFRASGAGGQHIQK TDSAVRITHLPTGMVVECQDERSQTQNKARAMAVLASRLYAQQVAEQHEREASERKNLIG SGDRSERIRTYNYPQGRVTDHRINLTLYRLEAIMNGDLEEIITALTTEHQAAALAELA >gi|319804223|gb|ADMF01000030.1| GENE 57 38339 - 39628 1012 429 aa, chain - ## HITS:1 COG:RSc2900 KEGG:ns NR:ns ## COG: RSc2900 COG0373 # Protein_GI_number: 17547619 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Ralstonia solanacearum # 1 407 1 413 435 418 55.0 1e-116 MQLLALGLNHTTAPLAVRERVAFSPDEITDTIAHLLERCGAASQGGIHEAAVLSTCNRTE LYTACEDPAAARASVLSYIANKKGVPLSELEPHIYAFQQEEAARHTFRVASGLDSMVLGE TQIVGQMKKAEKLAHDCRGLGVMLNHLFQSTFTVAKEVRTATAIGANSVSLAAAAVRLAL RLYGNLKDENVLFVGAGEMIELCAAHFAAQSPKSITIANRTMEKGQTLARTVHAEAIRLA DLPETIGRYDIVISCTASALPIIGLGMIERAITERRHRPMFIVDLAVPRDVEPEVDRLDD VYVYTVDDLGKVVSEGKQSRQAAISQAETIISLRVGDFVDWLHLRAAVPTIQSLRDRANF IRDDELSRALRHLHHGDKPEEVLEMLAHGLTNKLLHDPTILLRNGEGLSNDDRDLVGRML DRFYRRHDR >gi|319804223|gb|ADMF01000030.1| GENE 58 39823 - 40344 414 173 aa, chain + ## HITS:1 COG:no KEGG:Sca_0703 NR:ns ## KEGG: Sca_0703 # Name: not_defined # Def: hypothetical protein # Organism: S.carnosus # Pathway: not_defined # 18 160 38 179 186 107 37.0 2e-22 MNKPAASGDIAAETALSLARRAREARRLVRRRATLSAAAAVLPIPGLDIAVDLAAFADML NQINRSFALSPGQIERLHTDERIAMLSALSQVGAVFAGRYVTNAVVLTAVKQLGARWAAG RAAKWVPIAGQGAAAALSFWAVVRLGDAHIAECLRVREQVRALLTAPSSSEIP >gi|319804223|gb|ADMF01000030.1| GENE 59 40341 - 41099 517 252 aa, chain + ## HITS:1 COG:CC3160 KEGG:ns NR:ns ## COG: CC3160 COG0603 # Protein_GI_number: 16127390 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Caulobacter vibrioides # 15 248 8 241 242 285 57.0 4e-77 MTQFTEYASVGREMAALVLFSGGQDSTTCLGWALERFGRVETIGVDYGQRHQAELECRVR VREKMAQLKPQWGERLGDDHLLKLPVLGEIADCALTDERRIAFEASGLPNTFVPGRNLLF FTLAASLAYRRGLRVLVGGMCETDYSGYPDCRDNTLKSLQVTLDLGLDMPFIIETPLMRL SKAETWALAEHVGGDPFVELVRNDTHTCYMGDHQHRHVWGYGCGECPACKLRAQGWASWS EHARFADASTVV >gi|319804223|gb|ADMF01000030.1| GENE 60 41765 - 42505 598 246 aa, chain + ## HITS:1 COG:RSc2892 KEGG:ns NR:ns ## COG: RSc2892 COG1651 # Protein_GI_number: 17547611 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Ralstonia solanacearum # 1 235 7 239 248 154 39.0 1e-37 MAAISSLRALAATALPLLTIAAAQVQAAAIDAEAVREALMKNTGLKAESVQPSPIPGLWE VFIQDRLFYVDDKVGYVFSGSIIDTKTKTNQTQERLREFARENWSKWPRQDAVKQVFGKG QREVIVFSDANCTYCRSMERVFETVGNLTVWTFITPLIRGEQNNYEIVCAKDPSKAWADW MRRGITPPAAPQNCDSSVLTRNLKLAGRYSIGGAPTFFFPTGDRMTGAVSAEQFEGILAE QPTNGS >gi|319804223|gb|ADMF01000030.1| GENE 61 42573 - 43790 670 405 aa, chain - ## HITS:1 COG:PA1222 KEGG:ns NR:ns ## COG: PA1222 COG2821 # Protein_GI_number: 15596419 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase # Organism: Pseudomonas aeruginosa # 22 390 20 379 385 263 41.0 3e-70 MIPAQYLFARKIAGAALATVVALLTACTTTPPPSEPIPPPAKKGITFTRSDYANLPAVDG HRWEAALTAFRQSCSRIRIDAVWSGLCSTALSLPNSAPAAESFFRSNFTPWGVEIPAKKG RTSTGLMTGYYEPLLYGSRVRQPPYVHPIYGIPDNLLTIDLGELYPDLKGRRLRGKLDGR RVVPYDKRGAIQEKEAEMARWAIAWVSDPVDAFFLHVQGSGRIVLPDGSFMRVGFADQNG WRYHSIGQWLITHGHLSAHELSMQRIRSWAKANPSKVKAALAQNPSYIFFEERKSDTELG PIGAAGVPLTPEASVAVDQKYWKLGTPFIVSISQERPALAFTQPVIAQDTGGAIQGALRF DYFWGFGDDAGAAAGRQKSAVAAWLLVPNGLAPEEVLPNGAHAPR >gi|319804223|gb|ADMF01000030.1| GENE 62 43922 - 44611 660 229 aa, chain + ## HITS:1 COG:RSc2879 KEGG:ns NR:ns ## COG: RSc2879 COG0036 # Protein_GI_number: 17547598 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Ralstonia solanacearum # 5 225 11 237 242 298 67.0 8e-81 MRTCRIAPSILSADFARLGEEVRDVAAAGADWIHFDVMDNHYVPNLTVGPLVLKAIRPYV SIPIDVHLMIEPVDALVPSFIEAGADIITFHCEATKHVDRTLQLIRKGGVKAGLVFNPAT PLDYLDYELDQIDVVLLMSVNPGFGGQSFIESTIEKLARVREKLDAYKAQTGREIALEVD GGVKPANIARIAAAGADTFVAGSAVFGAGSAQGYAEVIRSMKSAVAVLA >gi|319804223|gb|ADMF01000030.1| GENE 63 44608 - 45312 326 234 aa, chain + ## HITS:1 COG:PM1620 KEGG:ns NR:ns ## COG: PM1620 COG0546 # Protein_GI_number: 15603485 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Pasteurella multocida # 7 202 9 206 224 102 34.0 5e-22 MIRAALFDLDGTLVSSLPELAKGVEMLSRELGAPVPPEAVVGDMIGGGVRVLIDRLFLWW QGAGAKELPDFESTLQRLVAIWSGMSGDLIREIPGAFAGVQSLKEAGISVWLVTNKERGL TEAFLRERGIDALFNGLVAAGDCAHPKPAPDMLIKAITSAGAEASEAVMVGDSRNDALAA RAAGIRAMLVESGYNEGVPLKEWARTAGFNEVFPSVKEVCEELLAQQGSRKCGN >gi|319804223|gb|ADMF01000030.1| GENE 64 45384 - 45752 131 122 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARFRQMTIRKNACSESIPIDLTGKLGIIFNQPAAFRHRAHEITFTLYECIKALPRYDEL IPTSTPPRRLVPRFCKRSDLLSNGLVLTLGIRKIELEAAVLLRRICIRFRPTGLNICCCR WL >gi|319804223|gb|ADMF01000030.1| GENE 65 45755 - 46456 409 233 aa, chain + ## HITS:1 COG:Cj0086c KEGG:ns NR:ns ## COG: Cj0086c COG0692 # Protein_GI_number: 15791474 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Campylobacter jejuni # 41 223 47 228 231 180 45.0 2e-45 MKPDFSTESLTGVWRTTVEHFMASPEGQNLVDRISSCTSDVFPPHPFRALEETPFEQVRA VIFGQDPYHTPGKACGLAFSVPAGEKLPPSLKNIFKVMAASNEIRRTRGDLSDWAAAGVL LLNTILTVEAGKPLAHAGWGWETLTDRLVAQLSSGRNGLVFFLWGKPAQRLRPMIDERRH LVLASSHPSPLSATRGDDAFMKSDCFHKANAWLEARGEAPIDWMGAAQHPVLF >gi|319804223|gb|ADMF01000030.1| GENE 66 46453 - 48207 913 584 aa, chain - ## HITS:1 COG:RSc2890 KEGG:ns NR:ns ## COG: RSc2890 COG3975 # Protein_GI_number: 17547609 # Func_class: R General function prediction only # Function: Predicted protease with the C-terminal PDZ domain # Organism: Ralstonia solanacearum # 2 576 4 591 621 266 31.0 7e-71 MLHYLITPHVNRHRYSVQLVLPVPYDNLLKLELPTWTPGSYVLREYAGRLTNLRAYWAEN ELPVRQVSKAQWVVDTAEAPVSATLRIEWEIFAYSVGIHDAYLDDDRGFINPSTLFLHPF NTNEPAEVFFDAPGWNVQCALPLRANAWQARNLDELLDSPYTLTPKDGHGAHIWTVEACG VSHQIVITGANSLNRDRVSSDLRKIFETTIAFWDPDEKKPPFERYLLQMHLGAGLYGGLE HAAGTMLLEDPKVLPAEGEIKPPKDYIEFLTLAAHEYFHAWLVKRLKPSCFLPYDLSKEV YSHDLWVFEGFTSLYESIIPLRAGLIDEATYWEQFGRRFNNALGREGFDQMTLAESSFNA WIKLYRQTKDSPYSQTSYYAKGALAAFLISDTLEQRSNGEWSLEHVLQSWFRTVRSKITD RTWSGLLDGGFAELVFELTGISIADVIEHWVSKPNVDRCEWIAAFSTALEHHGKKLTLDA NQNQAYALSGLKLRHSGADHELDYVPSASPAFKAGLFAGDVPIALDGMRITFERFDRMVE ACAGRIVEIVFFRGDRLTVRQLDLASPRSNAFLMLLPQRVIDLS Prediction of potential genes in microbial genomes Time: Sun May 29 20:10:43 2011 Seq name: gi|319804109|gb|ADMF01000031.1| Sutterella wadsworthensis 3_1_45B cont1.31, whole genome shotgun sequence Length of sequence - 117816 bp Number of predicted genes - 122, with homology - 83 Number of transcription units - 63, operones - 29 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 384 100.0 # DQ797278 [D:1..1400] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + Prom 835 - 894 3.0 1 1 Tu 1 . + CDS 934 - 1767 525 ## 2 2 Tu 1 . - CDS 1764 - 2159 79 ## - Term 2299 - 2344 7.4 3 3 Tu 1 . - CDS 2373 - 3428 1237 ## COG0167 Dihydroorotate dehydrogenase + TRNA 3665 - 3741 85.4 # Met CAT 0 0 + Prom 3667 - 3726 80.2 4 4 Tu 1 . + CDS 3946 - 5988 1436 ## COG0247 Fe-S oxidoreductase + Term 6010 - 6048 8.5 - Term 5992 - 6040 15.6 5 5 Op 1 . - CDS 6091 - 7209 668 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 7382 - 7441 2.3 6 5 Op 2 . - CDS 7444 - 11979 3162 ## COG1643 HrpA-like helicases - Prom 12081 - 12140 2.6 + Prom 12129 - 12188 2.1 7 6 Tu 1 . + CDS 12303 - 12590 362 ## COG2924 Fe-S cluster protector protein + Term 12616 - 12668 17.3 8 7 Tu 1 . - CDS 12676 - 13353 721 ## COG0120 Ribose 5-phosphate isomerase - Prom 13424 - 13483 2.2 + Prom 13412 - 13471 4.7 9 8 Op 1 8/0.000 + CDS 13505 - 15985 2286 ## COG0642 Signal transduction histidine kinase + Prom 15987 - 16046 2.4 10 8 Op 2 1/0.100 + CDS 16073 - 16936 977 ## COG4566 Response regulator + Term 16985 - 17025 10.2 + Prom 17029 - 17088 2.2 11 9 Tu 1 . + CDS 17158 - 18021 1100 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Term 18044 - 18091 9.6 + Prom 18512 - 18571 1.6 12 10 Tu 1 . + CDS 18664 - 20718 2244 ## COG0339 Zn-dependent oligopeptidases + Term 20841 - 20881 5.0 - Term 20829 - 20869 7.1 13 11 Tu 1 . - CDS 20939 - 22786 2392 ## SC3878 putative cytoplasmic protein - Prom 22827 - 22886 2.5 + Prom 22791 - 22850 2.9 14 12 Tu 1 . + CDS 22999 - 23934 645 ## COG0583 Transcriptional regulator + Term 23973 - 24007 2.0 - Term 23918 - 23970 13.0 15 13 Tu 1 . - CDS 23998 - 25002 1167 ## COG0078 Ornithine carbamoyltransferase - Prom 25172 - 25231 2.9 16 14 Tu 1 . - CDS 25390 - 25713 193 ## + Prom 25778 - 25837 1.6 17 15 Op 1 . + CDS 25913 - 26722 843 ## COG0708 Exonuclease III 18 15 Op 2 . + CDS 26771 - 27544 767 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 27590 - 27638 2.0 19 16 Tu 1 . - CDS 27635 - 30190 2175 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 30277 - 30336 2.8 + Prom 30643 - 30702 3.4 20 17 Tu 1 . + CDS 30745 - 31743 1266 ## COG3181 Uncharacterized protein conserved in bacteria + Term 31808 - 31845 3.3 + Prom 31864 - 31923 4.7 21 18 Op 1 . + CDS 31980 - 32483 514 ## Pnuc_1720 hypothetical protein 22 18 Op 2 . + CDS 32501 - 34012 1881 ## COG3333 Uncharacterized protein conserved in bacteria + Term 34056 - 34100 15.3 23 19 Op 1 . - CDS 34106 - 34747 585 ## 24 19 Op 2 . - CDS 34744 - 35922 531 ## COG0820 Predicted Fe-S-cluster redox enzyme 25 19 Op 3 . - CDS 36022 - 36705 345 ## 26 19 Op 4 14/0.000 - CDS 36711 - 38516 1516 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 27 19 Op 5 5/0.100 - CDS 38574 - 39731 879 ## COG3852 Signal transduction histidine kinase, nitrogen specific - Prom 39760 - 39819 3.3 - Term 39785 - 39826 8.8 28 20 Tu 1 . - CDS 39938 - 41350 1691 ## COG0174 Glutamine synthetase 29 21 Tu 1 . + CDS 41255 - 41434 174 ## 30 22 Tu 1 . - CDS 41457 - 41645 65 ## - Prom 41690 - 41749 2.9 31 23 Op 1 13/0.000 - CDS 41926 - 43095 766 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 32 23 Op 2 8/0.000 - CDS 43128 - 43745 354 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein 33 23 Op 3 . - CDS 43753 - 44571 767 ## COG0689 RNase PH - Prom 44768 - 44827 3.3 + Prom 44655 - 44714 3.2 34 24 Op 1 8/0.000 + CDS 44798 - 45700 1005 ## COG1561 Uncharacterized stress-induced protein 35 24 Op 2 25/0.000 + CDS 45713 - 46372 651 ## COG0194 Guanylate kinase + Term 46438 - 46482 5.4 + Prom 46374 - 46433 2.1 36 24 Op 3 18/0.000 + CDS 46492 - 46692 393 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 37 24 Op 4 . + CDS 46863 - 49220 1997 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 49268 - 49308 9.2 - Term 49256 - 49296 9.3 38 25 Tu 1 . - CDS 49322 - 49879 502 ## COG0782 Transcription elongation factor - Prom 50110 - 50169 3.2 - Term 50004 - 50042 7.1 39 26 Op 1 . - CDS 50227 - 50643 186 ## 40 26 Op 2 . - CDS 50658 - 50810 171 ## - Term 50836 - 50874 7.0 41 27 Tu 1 . - CDS 50956 - 51210 150 ## 42 28 Tu 1 . + CDS 51106 - 51297 63 ## - Term 51314 - 51343 0.5 43 29 Op 1 . - CDS 51367 - 51816 354 ## COG3772 Phage-related lysozyme (muraminidase) 44 29 Op 2 . - CDS 51816 - 52316 232 ## 45 29 Op 3 . - CDS 52321 - 52545 358 ## - Prom 52574 - 52633 2.9 + Prom 52585 - 52644 5.3 46 30 Op 1 6/0.100 + CDS 52669 - 52947 148 ## COG3549 Plasmid maintenance system killer protein 47 30 Op 2 . + CDS 52947 - 53270 205 ## COG3093 Plasmid maintenance system antidote protein 48 31 Tu 1 . + CDS 53409 - 54497 361 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Term 54626 - 54658 1.3 - Term 54376 - 54418 1.8 49 32 Tu 1 . - CDS 54524 - 55117 408 ## Bcenmc03_0189 hypothetical protein - Prom 55139 - 55198 1.8 + Prom 55019 - 55078 1.9 50 33 Tu 1 . + CDS 55116 - 56279 240 ## COG0582 Integrase + Prom 56768 - 56827 2.7 51 34 Tu 1 . + CDS 56993 - 57130 127 ## + Term 57300 - 57336 1.5 - Term 57286 - 57323 -0.3 52 35 Op 1 . - CDS 57397 - 57840 56 ## COG5301 Phage-related tail fibre protein 53 35 Op 2 . - CDS 57917 - 58516 203 ## 54 35 Op 3 2/0.100 - CDS 58513 - 59118 336 ## COG3778 Uncharacterized protein conserved in bacteria 55 35 Op 4 4/0.100 - CDS 59120 - 60145 521 ## COG3299 Uncharacterized homolog of phage Mu protein gp47 56 35 Op 5 . - CDS 60147 - 60560 294 ## COG4381 Mu-like prophage protein gp46 57 35 Op 6 . - CDS 60571 - 60705 123 ## - Prom 60736 - 60795 4.0 - Term 60757 - 60804 11.0 58 36 Op 1 . - CDS 60821 - 61453 469 ## COG4384 Mu-like prophage protein gp45 59 36 Op 2 . - CDS 61512 - 61760 257 ## 60 36 Op 3 4/0.100 - CDS 61793 - 62947 210 ## COG4379 Mu-like prophage tail protein gpP 61 36 Op 4 . - CDS 62944 - 64230 1004 ## COG4228 Mu-like prophage DNA circulation protein 62 36 Op 5 . - CDS 64239 - 66005 619 ## mma_2719 tail length tape measure protein 63 37 Op 1 . - CDS 66138 - 66410 197 ## Ent638_2590 putative bacteriophage protein 64 37 Op 2 . - CDS 66407 - 66766 376 ## SG0718 hypothetical protein 65 37 Op 3 . - CDS 66770 - 68263 1067 ## COG4386 Mu-like prophage tail sheath protein gpL 66 37 Op 4 . - CDS 68260 - 68715 309 ## Ent638_2594 putative bacteriophage protein 67 38 Op 1 . - CDS 68823 - 69287 85 ## 68 38 Op 2 . - CDS 69244 - 69630 221 ## SeSA_A4468 putative phage head-tail adaptor 69 38 Op 3 . - CDS 69627 - 69962 264 ## LHK_01771 hypothetical protein 70 38 Op 4 . - CDS 69975 - 71138 970 ## Bphy_3394 HK97 family phage major capsid protein 71 38 Op 5 3/0.100 - CDS 71152 - 71775 389 ## COG3740 Phage head maturation protease 72 38 Op 6 2/0.100 - CDS 71823 - 72743 403 ## COG4695 Phage-related protein 73 39 Op 1 . - CDS 73061 - 74761 762 ## COG4626 Phage terminase-like protein, large subunit 74 39 Op 2 . - CDS 74751 - 75209 187 ## XALc_2630 hypothetical protein - Prom 75234 - 75293 2.4 + Prom 75570 - 75629 1.7 75 40 Tu 1 . + CDS 75698 - 76054 207 ## + Term 76092 - 76133 -0.0 76 41 Tu 1 . - CDS 76073 - 76423 337 ## - Term 76497 - 76530 0.3 77 42 Op 1 . - CDS 76566 - 76877 191 ## 78 42 Op 2 . - CDS 76955 - 77194 135 ## 79 43 Op 1 . - CDS 77332 - 77613 149 ## 80 43 Op 2 . - CDS 77610 - 78173 170 ## COG1484 DNA replication protein 81 44 Op 1 . - CDS 78582 - 79277 176 ## 82 44 Op 2 . - CDS 79295 - 79525 110 ## - Prom 79555 - 79614 4.9 + Prom 79517 - 79576 3.0 83 45 Op 1 . + CDS 79646 - 80344 351 ## COG2932 Predicted transcriptional regulator + Term 80349 - 80391 10.2 84 45 Op 2 . + CDS 80439 - 80795 230 ## COG3657 Uncharacterized protein conserved in bacteria 85 45 Op 3 . + CDS 80792 - 81052 132 ## + Term 81091 - 81127 3.1 + Prom 81537 - 81596 4.4 86 46 Op 1 . + CDS 81632 - 82105 148 ## AZL_011870 hypothetical protein 87 46 Op 2 . + CDS 82102 - 82422 298 ## + Term 82441 - 82486 8.1 + Prom 82453 - 82512 2.6 88 47 Tu 1 . + CDS 82582 - 83013 307 ## + Term 83145 - 83204 3.6 + Prom 83122 - 83181 4.0 89 48 Op 1 . + CDS 83324 - 84178 639 ## COG3617 Prophage antirepressor + Term 84199 - 84237 7.0 90 48 Op 2 . + CDS 84246 - 84407 117 ## 91 48 Op 3 . + CDS 84419 - 84694 316 ## 92 49 Tu 1 . - CDS 84673 - 84849 109 ## 93 50 Tu 1 . + CDS 84886 - 85143 156 ## 94 51 Op 1 . + CDS 85359 - 85898 348 ## COG5377 Phage-related protein, predicted endonuclease 95 51 Op 2 . + CDS 85986 - 86339 122 ## 96 51 Op 3 . + CDS 86361 - 86603 226 ## 97 51 Op 4 . + CDS 86600 - 86860 256 ## + Term 86862 - 86911 2.1 98 52 Tu 1 . - CDS 87302 - 88903 996 ## COG5421 Transposase - Prom 88941 - 89000 4.0 + Prom 88872 - 88931 5.4 99 53 Tu 1 . + CDS 89081 - 89239 99 ## + Term 89242 - 89288 2.5 - Term 89233 - 89273 5.3 100 54 Op 1 . - CDS 89279 - 90142 359 ## HS_1527 hypothetical protein 101 54 Op 2 . - CDS 90139 - 91485 369 ## COG0582 Integrase - Prom 91519 - 91578 3.9 - TRNA 91717 - 91793 81.0 # Pro GGG 0 0 - Term 91788 - 91823 2.1 102 55 Op 1 13/0.000 - CDS 91836 - 92180 497 ## COG0776 Bacterial nucleoid DNA-binding protein - Term 92193 - 92244 -0.1 103 55 Op 2 40/0.000 - CDS 92257 - 94677 2453 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 104 55 Op 3 . - CDS 94693 - 95709 1233 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 105 56 Tu 1 . + CDS 95751 - 96011 116 ## + Term 96091 - 96129 0.1 - Term 96077 - 96117 6.1 106 57 Op 1 . - CDS 96144 - 96494 460 ## PROTEIN SUPPORTED gi|17546299|ref|NP_519701.1| 50S ribosomal protein L20 107 57 Op 2 . - CDS 96516 - 96713 237 ## PROTEIN SUPPORTED gi|114332289|ref|YP_748511.1| 50S ribosomal protein L35 - Term 96829 - 96868 5.9 108 58 Op 1 16/0.000 - CDS 96878 - 97351 543 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 109 58 Op 2 1/0.100 - CDS 97446 - 99356 2589 ## COG0441 Threonyl-tRNA synthetase - Prom 99377 - 99436 3.3 - TRNA 99526 - 99602 87.7 # Val GAC 0 0 - TRNA 99674 - 99750 87.7 # Val GAC 0 0 - Term 99659 - 99714 -0.3 110 59 Tu 1 . - CDS 99860 - 102034 2277 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 102174 - 102233 1.8 - Term 102222 - 102273 6.2 111 60 Tu 1 . - CDS 102301 - 104907 1332 ## - Term 105194 - 105238 9.0 112 61 Op 1 . - CDS 105275 - 106648 1748 ## COG2848 Uncharacterized conserved protein 113 61 Op 2 . - CDS 106705 - 107301 668 ## Ddes_0621 amino acid-binding ACT domain protein 114 62 Op 1 1/0.100 - CDS 107536 - 108420 632 ## COG0084 Mg-dependent DNase 115 62 Op 2 23/0.000 - CDS 108435 - 109148 284 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 116 62 Op 3 . - CDS 109141 - 110397 1357 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component - Prom 110556 - 110615 1.7 + Prom 110381 - 110440 3.1 117 63 Op 1 . + CDS 110636 - 111733 862 ## gi|302859479|gb|EFL82558.1| hypothetical protein HMPREF0189_01053 118 63 Op 2 . + CDS 111730 - 113421 1768 ## COG0608 Single-stranded DNA-specific exonuclease 119 63 Op 3 . + CDS 113453 - 113698 139 ## 120 63 Op 4 8/0.000 + CDS 113676 - 114740 1182 ## COG1186 Protein chain release factor B + Prom 114778 - 114837 1.9 121 63 Op 5 . + CDS 114857 - 116386 2019 ## COG1190 Lysyl-tRNA synthetase (class II) 122 63 Op 6 . + CDS 116393 - 117301 536 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 117462 - 117497 9.2 Predicted protein(s) >gi|319804109|gb|ADMF01000031.1| GENE 1 934 - 1767 525 277 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTEHSQALPRSVVLLRLLRRILSVTAVACAAAGMIASADALISGFGDGGDKLSVAADNS TVITGSISSEQGNRGLQVRIEPPEDGLTASDIRVSNSFFPSRMNWSALLYAAPSALGKNF TVTAGSPDTPPHELDVLFVQVLPNATAVRANSSSFLMRIWGWEPLNAAFAALIVAATACL LYFGLIYFGSAWLAKRGFVRVYHTRQEGDDTMLYCLDPQSSLNEAQTYPVLSAAGKLMGT AEVTSRGARYCILKLTAAQARTGCLVALPIEAEAADI >gi|319804109|gb|ADMF01000031.1| GENE 2 1764 - 2159 79 131 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFLGEATPDTAKKVATALAKVPQTAVCWRFSGLGVFSRQQILWAGLAETDRFNALAEQV RSCLDDMGQHYDRKPFRAHITLARQWQGPQPQALSSPLANYSFAVSPVCVRLYASERDAS GRICYRVLSSY >gi|319804109|gb|ADMF01000031.1| GENE 3 2373 - 3428 1237 351 aa, chain - ## HITS:1 COG:RSc1619 KEGG:ns NR:ns ## COG: RSc1619 COG0167 # Protein_GI_number: 17546338 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Ralstonia solanacearum # 3 343 5 343 344 355 54.0 6e-98 MLLYKIARRILFSMNPETAHAVTLANLDWAVNFGVTNLITHMPDDDPVEVMGLRFPNTVG LAAGMDKDGKHVTAFGGLGFGHVEIGTITPLAQPGNPKPRLFRLIPAGGIVNRMGFNNEG VDKVLENLRSADAFRLRGGILGINIGKNAVTPIENALSDYEKCLDKVYDAADYIAVNISS PNTKNLRQLQGKGELDHLVEGIVKKREELKAARNGKHVPIAVKIAPDLENDEILRCVDTL IANGIDGVICTNTTIGRKGVEGLDHANETGGLSGAPLRERSTEVVRLVADHVKGAIPIIA SGGVMTGADAVEKIEAGAQLVQLFTGFIYNGPKLVADSVEAVAAWRAKQGR >gi|319804109|gb|ADMF01000031.1| GENE 4 3946 - 5988 1436 680 aa, chain + ## HITS:1 COG:APE0101 KEGG:ns NR:ns ## COG: APE0101 COG0247 # Protein_GI_number: 14600449 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Aeropyrum pernix # 23 669 36 709 716 348 33.0 3e-95 MTAPLPADFPIRPGFWNVPLWGEIGVYVAAVITIALCAWGVCKNIEVWRRRKDEKLPSDP SRRDRLLKEAVLEEKVRQTSAGRMHAVLVVGFFLLFLGTATATLDWDVGHYVFGKQFLRG NVYLAYKLILDVAGAAVLVALAFAAWRRWGTANELPKDGRFVLAYASLAFIVITGFVIEA LRLAVQQPAWMHFSPVGSALAKVFLAMGISTAALETAHIWLWVIHGIAALAFIAAVPLTY YAHIYRVPTAIAVRKPAPNGALPKIENIEEQEHFGISSITDLSWTDRAQLDACVECGRCN DVCPAVRAGTPLKPRTVVLKLRDRVRAAAAGADDANADDLAGGVVTKDELFSCTTCGACA AVCPADIQTPDFIVGLRRHLALEQGEFPEGAAEALENTASVGNPWGLDPYERMDWAQGLD VPVAEEGEDYDILYWVGCAASYDRRARRIARAMVKILKTAGVKFAVMAEERCHAEFARRL GEEYLYQTAAQENIENFSRFKFKELLTACPHCFNTLKNEYPAFEGGSFAVIDHSSFISRL FAEGKLPRSAMQSERVVWHDPCYLARQNGIVRAPREVLASVGSAEFDPAECGANTLCCGA GGGQMWTDQKTQKKRINVIRLESLQNTASQCGASKIATGCPHCLTMLESAKPMVNGAQEL QVLDIAEVVAAKLPDEASPT >gi|319804109|gb|ADMF01000031.1| GENE 5 6091 - 7209 668 372 aa, chain - ## HITS:1 COG:RSc1609 KEGG:ns NR:ns ## COG: RSc1609 COG1686 # Protein_GI_number: 17546328 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Ralstonia solanacearum # 99 354 82 338 375 202 47.0 9e-52 MFLPFRQVALVFALGASLIALPLESACAAEAAGKKAVLVPIKAGSTAAKARTAQTKNVKS KQASVKKVSIKTAAKNTRQAAAKKPKPKQKARRVVRRTGPSQATLAGLRQTDDPLQLGSS VAYAMDQDTGEELVVKNADVELPIASVTKLMTALVIAESDVDLDEKVRITREDYVRSTAH SKLISGMRLTRESLLKAALMSSDNRAAAALARTYPGGRKAFVAKMNERAAAIGMTNSFFA DPTGLDNRNHSTARDLGKLVAAVYQHQEIRDASTTSMARISTGRRQVNLATTNRLIGDPS WRIGIQKTGFTTAAGRCMVVQSDVGERRLVMVVLDSPNNAQRADDMRTMRAYVQSESDFS RDFEHVAPYEIF >gi|319804109|gb|ADMF01000031.1| GENE 6 7444 - 11979 3162 1511 aa, chain - ## HITS:1 COG:RSc1251 KEGG:ns NR:ns ## COG: RSc1251 COG1643 # Protein_GI_number: 17545970 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Ralstonia solanacearum # 235 1510 25 1331 1331 1348 55.0 0 MADNRALMAAFQKVRADVDQALEQTRRKEEAARAAEEAKRAQERREKRQGSAAAKQSGIA SAGEANSARESKSEQSMVKTARVTPLQASSSAAKQASARVSENTAVRAPRTYSPKGAFGA VLAGAAQASGAVFRESPALQGESAGKRSKAPLTNKAASADKTVQNGKREILHPRFESASA AKANAGHREDRSGRADRPLQTAAGRSAKADSRQNRQLRPRRPNLPESGQVRTENGRQDTR ALSGGRSERSARPKLSWAERRNPIPPFELMPGLPVSERAADVVKAIKENQVVIVCGETGS GKTTQLPKICLMAGRGETGRIGHTQPRRIAASSIAKRIAEELKTPLGDVVGYKVRFTDQT ASGATIKLMTDGILLAETQGDPLLKAYDTIIIDEAHERSINIDFLLGYLKRLLPKRPDLK VIVTSATIDAERFANHFAVNGKPAPVLTISGRTYPVEIRWRPVEDRDEDDDRTMLAAIDD AVSECEMSGRGDILVFLPGEREINAAAEELRRSRIGKAEILPLYARLSAADQDKIFKPSG NMRRIVLATNVAETSVTVPGIRYVVDTGYARIKRYSYRSKVEQLLVEPISQASANQRSGR CGRVAEGICIRLYSEEDFARRPAFTDPEIMRSNLAAVILRAKALRLGDVREFPFVQAPPP KAFADGFAILQELGAISEDNELTEVGRSLSRLPIDPKLGRMLLEGARRGALRELLIVASG LSVQDPRERPAEQQQAADEAHKKLADERSDFLSYVKLWDWAEAARASKESNRKYDQELKR RFLSPRRLREWREVMGQLKALVDDLDWRLNTAPATYEEVHRALLSGLLGNIGSKTVESDR RAPPYAGARGIKFWIWPGSVRAKKSGRWILAGQIIETSKLFARCVADIEPEWIEAAAGPL IRRSWSEPHWEKSRGEVVALERGTLYGLTVYQQRRVSFAKHDPKLSRELFIREALVGGEF DGKLSFYHHNQRLVREIEDLEHKTRRPDVLVDDEMIFAFYDRELPQDVCSTKTLEVWLKA AEKENPKVLRLSREELMRHEASAAADAWFPKTMEMAGIDMTLSYQFEPGSPRDGVTMTVP LFALNQLDPVRAEWLVPGMVKEKAQALLKMLSQKIRRNCVPLPDYAAGFLTRTQNGTPQS IGFVDALAADVRSETGLPCQPSDFKTEGLPQHLILNFKVIDEHGRQLALGRNLAQLRAEL GEEAQATFRNVAQQDAAVAKDLGGEVTNWTFGELPELMEIQRRGETLIGHPALVDVGEAC RIEVFDDPLEAQKAHRKGLRRLFRLTLREQVKFIERSLRDLGRVQMQASVVPGLDKNFES IDDLENDVVDCVLDATALVDPLPMNEEAFQTRREDARGRLSLVAGEVSRLLTEIVAQAAP AALKLKRIENEALSADVAEQLKRLFPPHFLLSAPLSQLMNYPRYLKAVLYRLEHYSSDPA RDVARQADVERLTLPWVRAVAARRGQPDSHLEEFRWMLEELRVSLFAQQLRTPMPVSVKR LERIWQSITRL >gi|319804109|gb|ADMF01000031.1| GENE 7 12303 - 12590 362 95 aa, chain + ## HITS:1 COG:RSc1235 KEGG:ns NR:ns ## COG: RSc1235 COG2924 # Protein_GI_number: 17545954 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Ralstonia solanacearum # 1 90 1 89 91 119 63.0 2e-27 MARMVNCVKLHKEAEGLDYPPFPGELGVRIWKNVSKEAWADWTRLQTMMVNEYGLNLADA SARKHLMTQCERYFFGDGEAVAVPGYKPHPEEDQK >gi|319804109|gb|ADMF01000031.1| GENE 8 12676 - 13353 721 225 aa, chain - ## HITS:1 COG:STM3063 KEGG:ns NR:ns ## COG: STM3063 COG0120 # Protein_GI_number: 16766364 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Salmonella typhimurium LT2 # 7 221 1 216 219 249 60.0 4e-66 MTQSRPLSQSELKRLVARAALDYVESGAVLGVGTGSTVDQLIDQLPEIRDRIPACVSSSE RSTKRLEALGFKVLDMNEVDSIGVYIDGADEIDGHFAMIKGGGGALTREKIVASISRRFV CIADASKKVDVLGRFPLPVEVIPMAAREIKRRLEALGADVKLRDFVTDNGCSILDAAGLE IRDPQGLETEINSWPGVVTVGLFAARGADVLLLGTSEGVKTFKRG >gi|319804109|gb|ADMF01000031.1| GENE 9 13505 - 15985 2286 826 aa, chain + ## HITS:1 COG:RSc1598_2 KEGG:ns NR:ns ## COG: RSc1598_2 COG0642 # Protein_GI_number: 17546317 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 584 809 1 227 230 175 43.0 4e-43 MPADQSEHLISDAFRHLNAANKELPAKLPAFSEHGLWAAWAALLLVAAFLTGVAWLVIDS DREAETIRLKQTTDLVAQSIEAQVLGVSEILQKMSLRLVRGQQGDFASASLDLAAQTLFI DRREVTELALVTEKGEVRRVWSSSTARAPSLFEGINQINDAHLLRAVRLAKRFDRSLSTP FYVGPYSQRIFVNIVTPSAIPDTLLMARIDLTRLLLLAQQRYADTGSYLLSFALNGRSIP APVGSRGPSKPPVDQPELTEPIIYATDITLLDAAPEEEMSLVAKSYDHALFANNRVQYFS VGGLALMLLAAIGLVFYYQRQQVRSHRTLMAEYSLRRVMSESAVVGLRVTDLKGRMLYVN DTFPKIVGYPAKELIGQKPPYPYWAKNYVAELTERLLSATNHPEAEETLPVVTRFEAVRK NGEEFWAELRISPLLDDDGKPFGSIGALFDVTNSVLAQSRVEAANERFTLVVESMASAIA VLAEPNRDVLFFANRSYRTLFNDRPNGAAKLLARLEKAPPTVQSDGIFDEETSRWFDVRS QRIVWTRGETAVMVIATDITKRRELDLAREAQLRRAESTHRLVTMGEMASSLAHELNQPL AAIANYANAAATMLANGTLSKEREAQSYARIENQAQRAGRIIQRIRGFAKKTDAKLEPVA VETVIQETLELANIQARKLDSRIKLVIAPGLPLMMGDSVMLEQLLLNLLKNAMEACASSN IPMEERTIELHADPWEKNPERLQFQVVDHGPGIPEESRSKLFDAFYSTKSEGMGMGLNIC RSIAELHGGELRMDPTPGGGSTFSFTVPFVKEAVTHAPSIGENSSQ >gi|319804109|gb|ADMF01000031.1| GENE 10 16073 - 16936 977 287 aa, chain + ## HITS:1 COG:RSc1597 KEGG:ns NR:ns ## COG: RSc1597 COG4566 # Protein_GI_number: 17546316 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Ralstonia solanacearum # 16 211 11 207 210 187 54.0 2e-47 MMPNYDYSKDLTSDNKNGLVYVIDDDADVRESIKWLLESTNYRVEDYGSGETFIAQFNES VPSVILCDLRMPGMSGADVQDHLMRRRIDAPFIFITGHGDVPQAVQAFKKGAMDFIQKPF QQPQLQKLVDRAMRTAKELFARRQTLAANRALIEKLTPREQQVLERIVNGRLNKQIADDL GISIKTVEAHRASIMDKTASGTVADLMRVVVKSELYPKISSTLAEAVAALPSRLAETGLP HTEEHVEHLRRLDHELRESEAERERREAEAAVTGINSSMNGSSNSLL >gi|319804109|gb|ADMF01000031.1| GENE 11 17158 - 18021 1100 287 aa, chain + ## HITS:1 COG:SP0825 KEGG:ns NR:ns ## COG: SP0825 COG0190 # Protein_GI_number: 15900713 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Streptococcus pneumoniae TIGR4 # 4 286 3 282 285 287 57.0 2e-77 MTARIIDGKALAREVEAQARARSEALASRPGGRRPGLAVVLVGEDPASCVYVKNKTRACE RAGVISTEYRLPAETTEKELLELIEKLNNDPAVDGILVQLPLPKQINPDAVILSISPEKD VDGFHMLSAGALLTGRRNRGYRPCTPAGVMKLIEASGVNPEGLEAVVIGRSNIVGKPQAV MLLDAHATVTVVHSRTTNLADITRRADILVCAAGRPKMVKGDMVKPGAVVIDVGIHRDEN GKLCGDVDQLSVEPVAGALTPVPGGVGPMTIAMLIDNTVLAAERHLA >gi|319804109|gb|ADMF01000031.1| GENE 12 18664 - 20718 2244 684 aa, chain + ## HITS:1 COG:NMA0054 KEGG:ns NR:ns ## COG: NMA0054 COG0339 # Protein_GI_number: 15793085 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Neisseria meningitidis Z2491 # 7 677 2 673 678 673 52.0 0 MPTSDTTPNPLLSITDLIDYASVRPEHVVPAVKSLAAQVEAALEKADAPSTPASWENTVE PLEKAVLAFGRAWGAVGHLQSVVDTPALRDAFNEALPIATDLFLRLSQDEKLCDKYRELA ASPEFEELAPVRRRIVERELRDFRLSGASLPKVQRERVKAIGQELSQTSQKFSENLLDAT NAYELIIEDEKRLAGIPEETLALYRASAEAAGKKGFRLTLQYPSYLPAMKYCADRGIREA LYRAFSTRASEFDGGKFDNTPLIKRILELRAEEASLLGFKNYGELSLATKMAKSPAEVLD FLRDVARRSKPRAEDDVAQVDAYARDELGIDKIEPWDRAYAAEKLREARYSYSDAEVKRY FTQRAVFKGLFGLVEKLFGIEIEEAQASVWHPDVKYFEVKRNGEKIAAFYADLYAREGKR SGAWMDGERTRRIEDGKLITPIAYLVTNFAAPQAGREATMTHDEVTTLFHEFGHTLHHIL TAQTEPQVSGINGVEWDAVELPSQFLENFAWEHEIVKSISTHVETGEELPDELFDKMIAA KNYEAGAFCVRQVEFALFDMLLHSAFNPKTDSVQALLESVRREVAVVFPPAWNRFPQSFS HIFAGGYGAGYYSYKWAEVLSADCFSAFEEEGVLNPDTGRRYLKEILERGSSRDAIDNFV AFRGRKPELDPLLRLSGIIESQKH >gi|319804109|gb|ADMF01000031.1| GENE 13 20939 - 22786 2392 615 aa, chain - ## HITS:1 COG:no KEGG:SC3878 NR:ns ## KEGG: SC3878 # Name: not_defined # Def: putative cytoplasmic protein # Organism: S.enterica_Choleraesuis # Pathway: not_defined # 13 613 7 605 607 778 61.0 0 MSKQKAHQKLNQLTAVLMMAAAAALAAPAVQAGAGPSGPGYTYEVPGQLGAVAVNPYKIA PLTAVIYNGGYVLKNVSVRIVPKQNGQEIAYKVGDNQAKTYGGIPVFGLYADWRNTVEVE YDRWQGDQMKHIKETYRIWTAPAYVETDGYGARDTGFFNPEVKKVDPEFKDRLYFVNNLG QLDARSTKTVWNNPVGGALQWNYSPQNTIIDTTGEIRWYMLPETIYSFDNIWYGGTMMGF RQEADGAMSWGYGQRYAKYDIMGREIFNRRLPTGYADFSHASKKIESNGHYLLRVASDGY KRPDNKIVRTVRDVVLEVDGDGNVVDDFRLFEILDPYRDNVLKAIDQGAVCLNIDPAKQG KTLTAEELAKQDQNDHFGDIVGSGAGRNWAHVNSVDYDETDDSIIISSRHQSAIIKIGRD KKVKWILGSHEGWKTPYQDKLLQPVDKNGKPIKCEGSKCEGDFDWTWTQHTGWKVRSELS KGDVIYISAFDNGDARGMEQPALPEMKYSRAVVYKVDQKKMTVEQVWEYGKERGHAWYSP VTSLTEYYGDKDSIMVYSATAGAEFDWKTFSYTKFPSPVIDEFKWLAKEPSVEIILHGAE GYQAFPFDVKKAFHP >gi|319804109|gb|ADMF01000031.1| GENE 14 22999 - 23934 645 311 aa, chain + ## HITS:1 COG:PA5189 KEGG:ns NR:ns ## COG: PA5189 COG0583 # Protein_GI_number: 15600382 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 299 1 289 302 82 26.0 8e-16 MHIDKLAIEELRLLVLLYKTHSLKDSAVRLNVSTPTASRMLARLRAAVEDELFIRSASAM TPTHACRRLFPRVERILAEMDALTHEPQVFRPSHIKRIFRVMLHEQLFLAHFADVFREVR RLAPGVSIVIEAVSDAGHEALKTGELDAMIFPMTDNVSPDIKAQFLATCDFDILMRTNHP WLTEVNRDGTPDWSALKRYEKIETTIDSFGTRAPGGLDHWIFKGKLPEQHTALWCPYVQA ATELLPESDLTMVVYSPLARELCRRGGLTALSLASLGCGYPLGFLRHGRRDDDPALEWLR AVFVSCFNQKH >gi|319804109|gb|ADMF01000031.1| GENE 15 23998 - 25002 1167 334 aa, chain - ## HITS:1 COG:HI0596 KEGG:ns NR:ns ## COG: HI0596 COG0078 # Protein_GI_number: 16272539 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Haemophilus influenzae # 1 334 1 334 334 475 67.0 1e-134 MPMNLRGRSLLSLVHHTPAEIDYLVDLAIDLKKAKRMGNEVQRLKGKNIALIFEKTSTRT RSAFEVGAHDQGAGTTFFESHSSQIGHKESIKDTARVLGQIFDAIEFRGFKQETVEELAA YAGVPVYNGLTDEWHPTQMLCDLMTMKESCGKAWKDISFAYLGDARFNTGNSLLMIGAKM GMDVRIGAPKAYWPSAEIIALAEELAAVSGAHITITEDPNEAVAGVDFIHTDIWVSMGEP AEVWAERIALLKPYQVNAALMAASGNPQVKFMHCLPAYHNDETKVGANVIAEHPELADGV EVTEEVFESPASIVFEQAGNRMHTIKALMVATLA >gi|319804109|gb|ADMF01000031.1| GENE 16 25390 - 25713 193 107 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTQPKVMPKLSAGDPASVILPQSKPTTGRSKSLSRLPSKLQPADQRSRRRLGGAEESSGA SVCIVARVTREQREFFRAVGGARWAREVVNACIAEAERRGIAIPAKD >gi|319804109|gb|ADMF01000031.1| GENE 17 25913 - 26722 843 269 aa, chain + ## HITS:1 COG:RSc1593 KEGG:ns NR:ns ## COG: RSc1593 COG0708 # Protein_GI_number: 17546312 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Ralstonia solanacearum # 4 267 1 266 269 234 47.0 1e-61 MSRLRLASWNVNSLKVRLPQVLDWLESAKIDALVMQETKTTDDVFPQAAFAEAGFDVFFL GQKTYNGVALCSRQTTVKTSDVVLGLPGWPDPQKRFISALLSPLAAPEQPPIRFCGGYFP NGQAVGSSKYLYKLDWIAVLERTLKTYLADTPRLVLGGDFNIAPADADVWNPEAWRGKIL CSEPERKALERLFALGLYDSFRLFTQPAERFSWWDYRQSGFERNHGLRIDLLLVSEALKG AVESASIDDGPRGNPQPSDHAPVMLDLSL >gi|319804109|gb|ADMF01000031.1| GENE 18 26771 - 27544 767 257 aa, chain + ## HITS:1 COG:YPO3343 KEGG:ns NR:ns ## COG: YPO3343 COG0834 # Protein_GI_number: 16123493 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Yersinia pestis # 6 176 34 202 256 121 38.0 1e-27 MNAKPKLRIGIPGDYLPFGIINEDSPLGFAGHDVDLAAELCREAGLAPLFVLTTWPTFMT DLAEGRFDIAAGGVSWVPERARLTDALPRYAPFAKVALIRRDSIERFQTPEDLNQPDVRV IKNPGGTNERWVDANLTRAQVATVADNATIPARIANEVGDVMITDSFEAHWYASRDVRLT LAMNGRHLTPTAWKTMLVRRGARRPVLPGREHTAAASEPLAPILFSAWGRLERAGVLQTL AAKWLGAGKPSDGNAQH >gi|319804109|gb|ADMF01000031.1| GENE 19 27635 - 30190 2175 851 aa, chain - ## HITS:1 COG:HI0643 KEGG:ns NR:ns ## COG: HI0643 COG0243 # Protein_GI_number: 16272586 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Haemophilus influenzae # 81 847 49 824 825 634 41.0 0 MTNISRRHLFKTATAAGLAVGIPATQKAQAQVSDIRKIPKEFTAGLQSKMVYEPVPAAGI DLNTTGTFEQAASILNEGESINASHWGIMRTVVQGGRITRVKPFEFDYAPSFVLEGLAEL PYSEARIHYPMVRESYLKDGPASRERRGEDRFVRVSWETALDLAAKEIQRVYDTYGPSGV YGSSYGWKSTGKLNQATVIVNRLLNLMGGFSRRRNSYSQAAHASIMPYVVGTSNPRMTTY EVILKHTERIVFWACNPLVTADVNAATPLHNHAGYFRALKKKGIKTYSVNPLVTDTAAYM DSEWIAPNPGTDCALMAAMMYELEVTGKADHAFLAKYCSGWEEMKKYLLGEEDGVKKTPE WAAEITGVPAQKIRAFAQDLAAHRTMIMFGYGMQRAQYGEQTSWMVVTLAAVLGQIGLPG GGFGTRYQSASAGSPVSNGPIMSGLPGSPKPVRPVLPWKSTKLLPVAAITEVLERPGATV DFDGQKCTYPDIHLVMWGGGNPFCHHPDTFRLERAWKKPDTVIVADYVWSATARHADIVL PACTTFEHNDITNIGAETNDGLVAMKQVIKPQYESRSDYWIGTQLAKRLGIEEAFTEGRT EMQWIEKFYNDCRNNGARKGIVMPEFKDFWEKGYLFFEVEEKDREFVSFKTFREDPKANS LGTESGLIQIYSPKLASYGYDDCKGHPSYFEPIEGTAKATKEYPLAFVSPKSRYRMHSQL DNVNTARRGSVEEREPVWMNPADAQVRGLKNGDVVLVKCRRGACLCGLQVSDRIKPGVVS IQHGAWFEPENTPAGRIDVHGNANTIAIDVITSKIARGNVSSTGNVEVSLWKDEVPPVRI FNQPRRVNAVK >gi|319804109|gb|ADMF01000031.1| GENE 20 30745 - 31743 1266 332 aa, chain + ## HITS:1 COG:AGl312 KEGG:ns NR:ns ## COG: AGl312 COG3181 # Protein_GI_number: 15890266 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 332 7 329 329 196 40.0 6e-50 MQRRTMLGAIGAVALATAASFPLTAQAALKGEGGNPIRIVVPYPPGGPLDVSARAIADAV SPVLGTVVVENRPGAGGNVGMSYVSHAKGDGHTLVMGAVATLAINPSLYKKLPYDPKGDF KPVTLVATAANVLVITPAFSEKTGVKSVADLIAYAKAHPGKLNYASGGNGSAGHMAGELL KNKAGIDIVHIPFAGASPALLSVISGQTDLIFDNLASAAANIHAGKLIALAVTTEERTPL LADVPTMKEAGVPDFDIYTWFGLMVPGSTPDDIVDELNAAIVPVLRDPATVKKFQSFGAL PAPNTPAEFSAMVEREAEKYKMLVKISGARVD >gi|319804109|gb|ADMF01000031.1| GENE 21 31980 - 32483 514 167 aa, chain + ## HITS:1 COG:no KEGG:Pnuc_1720 NR:ns ## KEGG: Pnuc_1720 # Name: not_defined # Def: hypothetical protein # Organism: Polynucleobacter # Pathway: not_defined # 16 167 3 151 152 81 36.0 9e-15 MRSAAQHEEMVATAMIKNQKDFAAGLFYIVIGLFGATTLGENEIGSLSRMGPGYFPLIIS TGIILTGLAIAVKSLLLTPALPSEGRIELGRPFSGLLILGSVALYAATLLTLGFVLSISL MVIAASCAHPLFRLRDAVISAVILTTLSALLFVGGLGLIVPMWPTFF >gi|319804109|gb|ADMF01000031.1| GENE 22 32501 - 34012 1881 503 aa, chain + ## HITS:1 COG:RSc0793 KEGG:ns NR:ns ## COG: RSc0793 COG3333 # Protein_GI_number: 17545512 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 502 1 500 500 592 64.0 1e-169 MDLLNHLLIGFENAVTWTNLLYCFVGVTLGTLVGVLPGMGPVATVAMLLPITYALDPSTA LIMLAGIYYGAQYGGSTTAILVNIPGEASAVVTCLDGHRLALAGRAGAALGIAAIGSFIA GCFATVVIAAFAEPLTQVAFQFGPREYFSLMVLGLVGAVVLASGSLLKAVGMILIGILLG CVGMDVNSGALRYVFGIDELMDGFDFVALSMGVYGFAEIIRNLDVLGDREAKPVPVGRVL PSKNDLKISAGPITRGTLIGSFLGILPGGGALLSSFASYTLEKKLAGEKANPPFGHGNIR GVAGPESANNAGAQTSFIPMLTLGIPSNAVMALMIGALMLHDIAPGPQVMTNNPSLFWGL IVSMWIGNVFLVILNIPLIGLWVRLLRVPYRLLYPAILVFCAIGVYSINNNPFDIWITIG FGIFGWVVNKLGCECAPLILGFILGPMLEENMRRALLLSRGDLSTFVTGPISGSLLAVSA LLLLIVILPAVRSGREKAFAEED >gi|319804109|gb|ADMF01000031.1| GENE 23 34106 - 34747 585 213 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAQSASKETTLDLVDRQVETPVCAARRRRYWLVWWLWAVFGAAVSFRGMPAGGLLIAAA VLTAPFWVLFAVWPILWLRDHRRSKTLWAEETAVLLAPNPQQSASDSSADAQGGIALPVI LGHERESSGEGILIPMLGWEAAFPTLEPKRMGLHLVAADTLPGVHLPALDAGDLLAFSGW NQSAQSFGASEDDWQAARRWTEHLRTVLAGKVF >gi|319804109|gb|ADMF01000031.1| GENE 24 34744 - 35922 531 392 aa, chain - ## HITS:1 COG:PA1839 KEGG:ns NR:ns ## COG: PA1839 COG0820 # Protein_GI_number: 15597036 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Pseudomonas aeruginosa # 33 377 10 346 346 322 52.0 1e-87 MTQTERTDASIRSNPSSGSPLAYPSLAAFEAHLGALGAKPAHLRRICRAWLGSPSAAWPD ALGAEAEQPARSRAARLPAVLMAALANIRSRLDAVLTVRSRHPGADPESERLLLTLADGQ TIEEVLLPRRGVCVSTQMGCAVGCVFCMTGKGGLVRQLSDMEIAAQAALARRLRPETKKV VFMGMGEPSHNLDNVLRAAEFLALYGGFGHKDLVISTVGDERLFEALNRMSARPALAVSL HTTDDAKRRTLLPRGAKMTVKALTEAAEAWARKTGYPTQYQWTLIQGVNDGEEEVNRLIE LLTGHYAIVNFIPVNAVDGSVYSRPDREHAAHLVRRLKSAGIVATLRDSAAQDVDGGCGQ LRARVLSAESKARAEQAVRRTATPFDDRNSNA >gi|319804109|gb|ADMF01000031.1| GENE 25 36022 - 36705 345 227 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLEGLMGSKAKFSQRIDVPGTADTPENLQGGVLLVFPPGFGPTLSPGLDASAQALERQK LSRPRGRITARQVDRGPEVPQLLKWLERAGFPVAQEAARFSIFTWPQRWEADRPLDRRVL KAAAADAARLAEEVKKRRPLLLFFVSAQLLDAANLPEVLEALEPVLAHPAEPVRRITDLR LRVTAQRWVKALCFGLPMPRKTFTPETEETIAAGIAAIFRREELLPS >gi|319804109|gb|ADMF01000031.1| GENE 26 36711 - 38516 1516 601 aa, chain - ## HITS:1 COG:RSc1261 KEGG:ns NR:ns ## COG: RSc1261 COG2204 # Protein_GI_number: 17545980 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Ralstonia solanacearum # 39 576 2 501 502 550 57.0 1e-156 MVDDLYGTSDYGTTQPAAGGSTGKPPLRELRGAHDAGREPVWVIDDDRAIRWVLDRALAR AGIGCRTFERGQDALNALEAAKTVGGELPLVLVSDIRMPGLSGVDLLTKVKELVPELPVI IMTAFSDLESAVSAFQGGAFEYLTKPFDVLKAVELISRAMEDARRRGLHAAAGQAGAAAQ GAASAASPIDEPSAPVPDLIGQAPAMQEVFRAIGRLSQSNVTVLLTGESGAGKEVVARAI WKHSRRSRAPYIAINMAAIPRELLESELFGHEKGAFTGAVATRLGRFEQAKGGTLFLDEI GDMPMELQTRLLRVLSNGYFYRVGGHQPIKADVRVIAATNQNLEERVKSGQFREDLYHRL NVIRLRLPPLRDRVEDIAPLSAHFLAAGARELGVEPKTLTPEALNVIRAFPFPGNVRQLE NLCRWLLVMAPAQEIRVEDLPYEIRHKEAAAAAHPEALNAVNTHGAVGNPAEEGFKTETP EAASAQSHSAPLRSKPHAAAASSTDAEGDWKALLAAEAERILEAGEPQVWETLAHEFERT LIRTAMSATRGRRIEAAERLGLGRNTLTRKIAELGLTDELASRLPPVRKKDQVKSLDDGA A >gi|319804109|gb|ADMF01000031.1| GENE 27 38574 - 39731 879 385 aa, chain - ## HITS:1 COG:RSc1260 KEGG:ns NR:ns ## COG: RSc1260 COG3852 # Protein_GI_number: 17545979 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Ralstonia solanacearum # 34 368 34 360 361 253 46.0 4e-67 MTEKESLTDAVGTSFDLFDALAEAVFLLDDEGRITSANAAAETLIGRTRRALSGVDVAEF LPEAAGWFRRRAAAPGAVEAASFMLPAVEFLRGLLPSVRVRASFSSLSPKPLNAPSGTTA LLEVVDLDDALRAERDAIAEAGRAANSELLRNLAHEIKNPLGGIRGAAQLLESELVRDED RECTNVILEEAARLQELVDRLLMPYRTPAAAGPVNIHEVLEHVRSLIGLEFAQGLTIERD YDISAPAVFGDRGRFTQVFLNLARNAAEAMTEGRAHGTAVIIFKTRIARDVMLAGTRTRT ALRIDVVDNGPGVPEHLKERIFFPLVTGRAEGSGLGLALVKTFVEEAGGSITLESRPGRT DFTVLLPLEGREARENREAKNGKGA >gi|319804109|gb|ADMF01000031.1| GENE 28 39938 - 41350 1691 470 aa, chain - ## HITS:1 COG:RSc1258 KEGG:ns NR:ns ## COG: RSc1258 COG0174 # Protein_GI_number: 17545977 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Ralstonia solanacearum # 3 469 4 470 471 725 71.0 0 MTSAADVLQMIKDNDCKYVDLRVTDLLGKEMHLTIPADKIDEDTFELGQPFDGSSFVGWR GIESSDMLLQPDPSTARMDPFREANTLVLNCDVLEPTTGKGYERDPRSLAHRAEAYLKST GIGDTAYFGPEPEFFIFDSIQWDHQSGSSFFKIGSEEAPWSSGLDFEGGNLGHRNRAKGG YFPVPPCDSLTDMRSEMCTLLEQQGVPVEIHHHEVGGAGQCEIGTRFSTLVQRADWTQIL KYTVWNVAAAYGKTATFMPKPIEGDNGSGMHVHQSIWKDGQNLFSGNGYAGLSEMALYYI GGVIKHARALNAITNPGINSYKRLVPGFEAPVKLAYSSRNRSASIRIPFVNSPKARRIEV RFPDPLCNSYLGFSALLMAGLDGIQNKIHPGEAADKNLYDLPPEENAKIPTVAPNLEVAL DSLDRDREFLTRGGVFTDDLIDAWIAEKRKDVLRAEMAVTALDFDLYYSH >gi|319804109|gb|ADMF01000031.1| GENE 29 41255 - 41434 174 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHFLAEQIGDAQVHVLAVVVLDHLQYISSGRHIHLSYFDGGSVLEPFQTNGFRRGSLAG >gi|319804109|gb|ADMF01000031.1| GENE 30 41457 - 41645 65 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGQGFHESFGESRKYVNGAVFGYWRRRIVWHMFSIWHGPCFSYEYAFFKAAASESASGG PL >gi|319804109|gb|ADMF01000031.1| GENE 31 41926 - 43095 766 389 aa, chain - ## HITS:1 COG:NMB0665 KEGG:ns NR:ns ## COG: NMB0665 COG0635 # Protein_GI_number: 15676563 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Neisseria meningitidis MC58 # 1 389 15 391 391 381 48.0 1e-105 MPPLSIYLHWPWCVRKCPYCDFNSHRLPASTADRLAFESAYAAGVLQDLEAWCRQAPEIA DRPIVSIFVGGGTPSLMSGETVERLLTGIRSRFRLTEDCEITMEANPGTAESEKFKAFRA AGVNRLSIGVQSFSDEKLRRLGRIHTADDARAAIDMARRSFENFNLDLMYALPGESIADL QMELAEALSSGATHLSCYQLTIEPGTAFEKRLPEDLPDLDETAEMGDVVEAILAQAGYTR YEVSGYAQPGRQCRHNLNYWMFGDYLAAGPGAHGKLSVVNAEGFSILREARRVNPRKWLE ALEATGSGAEESHFVPPEDRPFEFMLNALRLLNGVPASLYAERSGLPLESILPQLERLRR DGLLSADPDRIAPTRRGLDFLSDVQEAFL >gi|319804109|gb|ADMF01000031.1| GENE 32 43128 - 43745 354 205 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 1 197 1 201 207 140 41 2e-32 MTKNDPILVLASGNAGKIREFQAMFSHLNVHVESQKTFGVKPCPEPFHTFIENCLAKARH AAKETGRPAMADDSGLCVDALGGAPGVYSARFAGEDATDEDNNRLLMEKLHGVKNRQGHY VCVLVAVRSPDDPEPLIAEGTWEGVIAEAPKGSGGFGYDPYFYLPEAGATAAELSPEAKN ASSHRGKALVKMARLLKERWGWGAA >gi|319804109|gb|ADMF01000031.1| GENE 33 43753 - 44571 767 272 aa, chain - ## HITS:1 COG:RSc2159 KEGG:ns NR:ns ## COG: RSc2159 COG0689 # Protein_GI_number: 17546878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Ralstonia solanacearum # 30 264 2 236 238 296 63.0 3e-80 MMNIDAQISASNALMLEKMMTTPKEAFVPRPDGRAVDALRPVEITRRFTKYAEGSVLMCA GDTHVLCTASVTVGVPNFLRGKGEGWVTAEYGLLPRSTGTRTDREAARGKQTGRTQEIQR LIGRSLRAVVDRKKLGEHTIQIDCDVLQADGGTRCASITGAWIALRDAVDWMLAKGMISE DPILAQVSAVSVGMWSGEPVLDLNYAEDSASDTDMNVVMTSAGKYVEIQGTAEGDPFSEG DLAKLLALAKKGNAELAAFQRKALTEKAEAKQ >gi|319804109|gb|ADMF01000031.1| GENE 34 44798 - 45700 1005 300 aa, chain + ## HITS:1 COG:RSc2156 KEGG:ns NR:ns ## COG: RSc2156 COG1561 # Protein_GI_number: 17546875 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Ralstonia solanacearum # 20 300 29 311 311 204 45.0 1e-52 MPSIASMTGYFAADGMTPAGTVTVECRSVNSRFLDLTLRLDDTLRFAEPAIRERLQKRLT RGKVEVRMSLSADESALPAQINESALKRLLELQSAVLRHSPEAAELSVSEILEMPGIAHT AQTDKDELLQAVLAVLDKTLDGFIAAREREGAALAKVINSYMDKMTSVVEEVRAAIPQIL AQLQAKLAARLEDALSQTLTQQGTLTKEEITERIRQEVTLYAMRMDVDEEMNRLTTHIAE VRRLLAAGGAVGRKLDFMAQEMNREANTLGSKAAAIEMTQASLSLKITIDQMREQIQNLE >gi|319804109|gb|ADMF01000031.1| GENE 35 45713 - 46372 651 219 aa, chain + ## HITS:1 COG:RSc2155 KEGG:ns NR:ns ## COG: RSc2155 COG0194 # Protein_GI_number: 17546874 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Ralstonia solanacearum # 16 217 19 220 221 250 62.0 1e-66 MPEVSISEHARKTRHPGRLFLVTAPSGAGKSSLVNALLARQPNIKLSISNTTRDPRPGEV NGREYHFVTEDMFLEMKSRGEFLESAYVHGHYYGTSRPWIESQMARGNDVLLEIDWQGAR QVREKFEGTVGIFILPPSIEALEWRLHHRGTDSPQTITRRLMGAGAEIAHAPEFEYVIIN EEFDTALAQLEAIVTASRLTYDQQALRHRDQFANLGVPV >gi|319804109|gb|ADMF01000031.1| GENE 36 46492 - 46692 393 66 aa, chain + ## HITS:1 COG:RSc2154 KEGG:ns NR:ns ## COG: RSc2154 COG1758 # Protein_GI_number: 17546873 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Ralstonia solanacearum # 1 65 1 65 67 92 72.0 1e-19 MARITVEDCLKKIPNRFQMVLVAAYRARQLSQGYAPKIDAKDKPGVIALREIADGLIGTD MLKNVR >gi|319804109|gb|ADMF01000031.1| GENE 37 46863 - 49220 1997 785 aa, chain + ## HITS:1 COG:RSc2153 KEGG:ns NR:ns ## COG: RSc2153 COG0317 # Protein_GI_number: 17546872 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Ralstonia solanacearum # 67 772 11 730 735 686 48.0 0 MALDNLPAFPDDMYDTAHDGAVPQPVTPRKPISPFSFTKHLTRTPVPVAVVPEDLPDADL PLFTPQPPVGVVTAQALVDTCRSYLSNADVEKIREAYRYADNAHLGQFRKSGEPYITHPI AVASILASWRMDAETIEAGLMHDVLEDTGTSKREMAEKFGIEVAELVDGVSKLDKLRFSS NEIAQAESFRKMLLAMARDVRVILVKLADRIHNMRTLGVMRPEKRARIARETLDIYVPIA HRLGLNNVFRELQELSFANRYPFRYKVLYANVLKTRQARREFLEKMMEDTRTALLKAGIP CRILGRDKTIYGIYNKMREKHQSFSDALDIYGFRLVVKNLDDCYLSLGALHRRFKPVHSR FKDFIAIPKSNGYQSLHTTVIGPDGTPVEFQIRTEEMHRIDENGILVHWLYSSSEDTSDL QSRTAAWLQNLLEIQRTSTDSTEFLENIKVDLFPNRIYVFTPKGKIISLPKGSTAIDFAY EIHTDVGNHTQAVRINGEAKQLSTALRNGDLVQVETSPDAHPSPEWLEYVHSGRARAEIR QYLRSCQFDESTKLGRLALEALANEQKIDFTTIPISIEEKLLKEFGADSLASLYAMIGLG KALPAAVLHRLRSLMREENLDSSGEELPAVIINGNEGIAQHLAVCCHPIPGDDITGYNRP GLGLTVHREDCPHAARGKQADPNRWMHLEWGPTKQGAHFSVPLEVRVKDAHAGLATVAAA VAEANSSITAVTLDDSQGEHIVHVTVLVRDKNHLIHVMRTIRQNDVVIKVKRSLEEGVST KKKIN >gi|319804109|gb|ADMF01000031.1| GENE 38 49322 - 49879 502 185 aa, chain - ## HITS:1 COG:RSc2152 KEGG:ns NR:ns ## COG: RSc2152 COG0782 # Protein_GI_number: 17546871 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Ralstonia solanacearum # 3 178 9 182 187 203 61.0 1e-52 MADSDDEEVKLPGLPPNTKNYMTPACYRRLLDEREHLVNVERPDVVNVVAWAASNGDRSE NGDYLYGKKRLREIDRRIRFLNKRIESAEVVDPAVHPETDQVFFGATVLYCNQRGEERKI RIVGIDEADAEHGDVSWISPIARVFLRRHEGDEVKLPTPATSTHPAGVDTLEILEVTYTD QQPVP >gi|319804109|gb|ADMF01000031.1| GENE 39 50227 - 50643 186 138 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNWLKYAAVTMLVFVVFSAGYQLASARGDAALKSYQLEAAVARAEQGRKDYAKLVSAVD QVVAADVDIERIRSDTDRMRRAYESRLRKASAAACNAEQAAVARCEKLLRESVGLIEEGR SLLLRNAAVHDALVSTHD >gi|319804109|gb|ADMF01000031.1| GENE 40 50658 - 50810 171 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSKEQLMKLDKTITFWKGFASGFATAVIGVAGLVALINYLIQIAQAVKS >gi|319804109|gb|ADMF01000031.1| GENE 41 50956 - 51210 150 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVMQGIWNDGLDQSGISGTCYRRVYRGSKLVAFHWYYVRHYRLLGRPCCVRVSLGWKLF SSYESGRKHHTCYANPIKGWHIRQ >gi|319804109|gb|ADMF01000031.1| GENE 42 51106 - 51297 63 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEGNKLRASVYAPIARAANTALIEAIVPDALHHRHKGCPASGTTTTTEANSRFLAQKKAG SVR >gi|319804109|gb|ADMF01000031.1| GENE 43 51367 - 51816 354 149 aa, chain - ## HITS:1 COG:STM2612 KEGG:ns NR:ns ## COG: STM2612 COG3772 # Protein_GI_number: 16765933 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Salmonella typhimurium LT2 # 13 146 8 149 150 110 46.0 6e-25 MKKTFGEYPPDLAVPLVIEYEGFRSKAYLCPAGVWTIGYGHTGGVHPDDRIDMENARHVL ASDLQDVQNRLIEYLNVSVTSGQFIALISLAFNVGVRAVSMSKLLRKLNEGDEEGAADEF LDWTKAGGKELAGLVKRRREEREYFLRGY >gi|319804109|gb|ADMF01000031.1| GENE 44 51816 - 52316 232 166 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIHDLLPKTVEGALTILGGWIGLIWSATLQSVAPLAWWFAIFVLTDLITGVWAGVKTTGF SSKALYAGMFKKGIAFAIIILAHGLDVSFWYVLKNLPVFQSVVLCAYCCGEFGSIVENIE RAGYGDALPPALRKIFLTLEKRLENAVDSKLDSIGLDDAPKDKKEM >gi|319804109|gb|ADMF01000031.1| GENE 45 52321 - 52545 358 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTIEEVKKMLEALGIKTDELKGAALEKAQAWLDAQKAQMDTETRRKCRVFWGCVTGVMTL VGGVAGFYIAHLIG >gi|319804109|gb|ADMF01000031.1| GENE 46 52669 - 52947 148 92 aa, chain + ## HITS:1 COG:XF0721 KEGG:ns NR:ns ## COG: XF0721 COG3549 # Protein_GI_number: 15837323 # Func_class: R General function prediction only # Function: Plasmid maintenance system killer protein # Organism: Xylella fastidiosa 9a5c # 1 92 13 105 105 89 47.0 2e-18 MIVSWIHKGLKDFFETGSMAGIQAEHAKRLRVRLEILNAIRSLDEMNYPSFRLHALQGDR KGIWSITVTKNWRITFKFEDGNVYIVNYEDYH >gi|319804109|gb|ADMF01000031.1| GENE 47 52947 - 53270 205 107 aa, chain + ## HITS:1 COG:yddM KEGG:ns NR:ns ## COG: yddM COG3093 # Protein_GI_number: 16129436 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Escherichia coli K12 # 1 93 26 117 120 80 39.0 1e-15 MTRMFNPPHPGGLLAEGLEYLGFSARQFAKHIGVAPSTVTRILKEESPITPEMAVRISAA ISGPRPETWLAMQADYDAWQAEHSVDISRITRISEPQKNHPQVACYA >gi|319804109|gb|ADMF01000031.1| GENE 48 53409 - 54497 361 362 aa, chain + ## HITS:1 COG:SP1771_1 KEGG:ns NR:ns ## COG: SP1771_1 COG0463 # Protein_GI_number: 15901601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 24 248 6 223 259 108 32.0 1e-23 MCPYQICINIVTPPPVSEQHRTAKVAVVFPVYNTARYLRECLDSILAQSYKNFVVFAVDD GSTDTSSQILDEYAAKDQRIVVNHQKNGGVARARNVALDAIENDGSFFYVAYVDSDDYVA SDFLRTMVKHMDNAKADYGVCASEMFDKNGFIKLDYAMPPYAVMDQDGIAEQFFRNPTPS KGKHDPTVRRWLSTRVFRLKAISGSRFDTKLRCGEDQEYFLRNLRQLKIGVQVPELLHFY RLRGSSLSHSTRATAYDLSIYESFNFDNKDFTNFAKVGLEQLLIDAWWQETRRIYQTRGT KEERQNVRRVFNRLASTPLLTPPSSKTKRRFLFFKLGDWFLRLYFGLRKNKNVEANKYTY FE >gi|319804109|gb|ADMF01000031.1| GENE 49 54524 - 55117 408 197 aa, chain - ## HITS:1 COG:no KEGG:Bcenmc03_0189 NR:ns ## KEGG: Bcenmc03_0189 # Name: not_defined # Def: hypothetical protein # Organism: B.cenocepacia_MC0-3 # Pathway: not_defined # 112 188 52 141 142 64 45.0 2e-09 MASIFKQIPSVDEDGYFEDMTVVQELEGVELPDHCVDIAAPKDPAHFFYKLNDDRKGWTA EKKPTTAAECVACGVVSHESQTERCGELRNLFQTLAEGSTECRVKRGEDLSWAVEKIPEK TEAEKLAEAEEQVRAQRDSLIAATDFLMASDYPISDEDRAAVAAYRQALRDVPQQEGFPH EVVWPEAPTVFKNTKNQ >gi|319804109|gb|ADMF01000031.1| GENE 50 55116 - 56279 240 387 aa, chain + ## HITS:1 COG:VC0847 KEGG:ns NR:ns ## COG: VC0847 COG0582 # Protein_GI_number: 15640863 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 6 378 11 405 422 177 33.0 2e-44 MNNSLKKIAAILPKEKRFTVTDSHGLCLRVYPSGIKSWYLRLSYAGRVTDIALGRWPEVT LKQARQEARKRRKALGLEHPRGYVLADAFKLWCNLKRGRIVSYTDEKRRLERYIIRPIGG RQIDEITAPLVIHTVKSIEAAGHQATLKRVLMRTREILDLAVCAGYIQHNPIDRVSRVFA APIVKPMPAPPWRELPIVMETIKDAPARMRVLFLFSLCSMLRPGENAKLRKSWIEADVLT IPAIEMKKGRAHRVPITSFMQTLINAEQRLSPHPRSDFIFAAKQAGKHVSPQALAKYLHS TELRGHLVAHGLRSIARSWLADHETPFEVAEACLSHVSGTAVSRAYQRSDYLAARTLVMA RWSTFVEDCARKARLIDGLLEPARHES >gi|319804109|gb|ADMF01000031.1| GENE 51 56993 - 57130 127 45 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDPKFSPISVEIVARCGKKFFRVKVAISVAALIVLVSTVSKYLR >gi|319804109|gb|ADMF01000031.1| GENE 52 57397 - 57840 56 147 aa, chain - ## HITS:1 COG:RSc1921 KEGG:ns NR:ns ## COG: RSc1921 COG5301 # Protein_GI_number: 17546640 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Ralstonia solanacearum # 4 61 401 460 554 67 58.0 9e-12 MPTGMLGHFYSVPDGWLLCNGAAVSRSTYAALFAVIGTKHGSGDGSTTFNLPNLANRFVE GTTSIGSVGTFKSAGLPNITGGINVARGWGGIADTGALYRRGETQAPGGGAANGINLYLN ASKLSSVYGSSSSVQPPAVALLPCVKI >gi|319804109|gb|ADMF01000031.1| GENE 53 57917 - 58516 203 199 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAGYWQASAIDSPPSLSTLSSKGYPTSGNPKTGTPATKPGAAWFYLIDQMRISVIDACG MTQVEPPSITQFLEALQSFKWTKDGALDGAALKAGSVKELHLAERAVTAKKLATPLDFQV GGVAIQIKGYTTAELAQIIPADREVVLNTETWILYAGDGTTTGGRPIGGTTAQEVESLKI IVTQLTQAVAKLGGETVNI >gi|319804109|gb|ADMF01000031.1| GENE 54 58513 - 59118 336 201 aa, chain - ## HITS:1 COG:ymfQ KEGG:ns NR:ns ## COG: ymfQ COG3778 # Protein_GI_number: 16129116 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 199 1 194 194 90 30.0 3e-18 MALTEKHYAHQVESLLPRGPIWHRRQDGMLDAILYALAREAARVDERANAVLEEADPRSS IEELERWFDEWGIPSECLAAIADPSREQMRQELLAKITSNLGLTAAFFESLAGTLGYQAK VTTFTEHTVDSTVDDALWDEQWTTVMTLGITIRSDGNAEYFDVTWGVDEHLARWGNALLE CMIRALAPAHVYVIFIYEEEA >gi|319804109|gb|ADMF01000031.1| GENE 55 59120 - 60145 521 341 aa, chain - ## HITS:1 COG:YPO1250 KEGG:ns NR:ns ## COG: YPO1250 COG3299 # Protein_GI_number: 16121536 # Func_class: S Function unknown # Function: Uncharacterized homolog of phage Mu protein gp47 # Organism: Yersinia pestis # 1 341 1 378 378 155 30.0 1e-37 MSFERPTLSQIIKRVQADAESRMGKKAMRWSLVPVLVRVISGVSHGLHGFIAFVLRQCFT TTAEGAYLERRASEYGIYRKAASAATGKVSFIGAGTVPVGTQLQAEDGSVYVTTAASIDG KAPIEAAVAGASGNSEAGMELTLVSPIAGIMSVATADELTGGAEAEDDESLRERLLQRQK SPPKAGTKADYVAWTLAVSGVTRAWCYPQELGQGHVTVRFMTDGMTSNGIPTETMVKRVD EYITSQMPVTAILHVVAPVPKSLDITLDILPDDEAVKAKIESAIESVVLAEAVPGGAVLR TSIDRAISGVSEVKSYRIVTPTDDVSTVVGEIYVPGTITWV >gi|319804109|gb|ADMF01000031.1| GENE 56 60147 - 60560 294 137 aa, chain - ## HITS:1 COG:YPO1249 KEGG:ns NR:ns ## COG: YPO1249 COG4381 # Protein_GI_number: 16121535 # Func_class: S Function unknown # Function: Mu-like prophage protein gp46 # Organism: Yersinia pestis # 15 127 26 135 151 85 46.0 4e-17 MELILNGKDADLSDFEADELAQAVLISLFSWRKSAADDGPVAPYRQGWWGDTFAQETGDR IGSRLWLLQRQKMLPQMLRRAEAYAKEALKWLTEDAVVARIEVTAERSDIDQLTLTVVCF KPDDTQALAARFQNVWS >gi|319804109|gb|ADMF01000031.1| GENE 57 60571 - 60705 123 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MILLKDPHPILTVRILRATLCLASLITLVGLAGYVLHLLIEWFA >gi|319804109|gb|ADMF01000031.1| GENE 58 60821 - 61453 469 210 aa, chain - ## HITS:1 COG:NMA1321 KEGG:ns NR:ns ## COG: NMA1321 COG4384 # Protein_GI_number: 15794248 # Func_class: S Function unknown # Function: Mu-like prophage protein gp45 # Organism: Neisseria meningitidis Z2491 # 10 209 26 221 222 101 33.0 1e-21 MGRLDDVLARGTVSAADGTKKMRVVQVRLLADEVRDDLEHVEPYGFTSEPLDDEQPEAFA AFFGGDRSHGIVFCIADRRYRLTKLKAGEVALYDDQGQKVHLTRDGIVVHTDKQLEATVG GTLTATAGGAATLKAPSVKIDSQMVEITGQLKVAQLITGTGGMAISGGSGAAVTGDIKVS GGDVTADGISLQSHTHGGVQGGSGTTGKPQ >gi|319804109|gb|ADMF01000031.1| GENE 59 61512 - 61760 257 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQASFAGAFVCEKYINKYGLLSDRNCVYHSELNPNIVTPHKDGDIKRIQVQDDRVFVER YGRDGQEEEWHESSKGEWVRMH >gi|319804109|gb|ADMF01000031.1| GENE 60 61793 - 62947 210 384 aa, chain - ## HITS:1 COG:YPO1247 KEGG:ns NR:ns ## COG: YPO1247 COG4379 # Protein_GI_number: 16121533 # Func_class: R General function prediction only # Function: Mu-like prophage tail protein gpP # Organism: Yersinia pestis # 3 364 2 343 351 109 24.0 8e-24 MTDNKVEVRIGGRRFGGWKSVRIETGIEQLSRAFALEVTEKFPGSTDFGFFRNGDLVQVY IGDDLVCTGWISSTPIQYDGKSVKVQIQGKSRTVDLVECCPPSAAYVATGSKNAWVGVKG KSGTAITTTSTNPATSWKNQSVSQIIADLAKPYGVTVKDEVGIGKTLTNHTVNPGEKVFE SINRLITKENLVVMDDEQGNLVITEPGSAGQAADALELGVNILAGSSAFDFSKRYSHYIA VGQHAGIDTDFGRSAAEDKGTATDSDVGRFRLLVLKDSGQSGGQMCAARANFEAAYRRGV SLKASYTIQGWRQSDGTLWRPNQFIRVEDEILKRSDLMLVTKIIFQLSASGMITTLEVSL PSAFKRDVLSQSNVVTKNAWKGVK >gi|319804109|gb|ADMF01000031.1| GENE 61 62944 - 64230 1004 428 aa, chain - ## HITS:1 COG:HI1515 KEGG:ns NR:ns ## COG: HI1515 COG4228 # Protein_GI_number: 16273417 # Func_class: R General function prediction only # Function: Mu-like prophage DNA circulation protein # Organism: Haemophilus influenzae # 11 418 9 445 455 110 26.0 4e-24 MSKFSDQLQPASFRGIPFEVTASGLKIGRRTVVHEYPQKDQPFVEDLGRATRQITLTAFV IGDDYIAQAQSLMAELEAPGSGTLIHPWLGEMEVTITSISELKFDAALGVASVVITATEA GILEFPTISVDAESEAFDVADAVEESAIDRFVTSIDLKTINEYIDSALQGDILDCLGIIS NSELSKIFDFAEGVAETASKAMSLLSTDPKIFATKLAGALGLSRWATTVSAWRGVAKQLE NLVGHDKLSSGTKAYRKVVEEGTTLSDVQKTVMKNRAAVETLTRQLLIAQMVGVSALVGS DKDSSAPGTTLPTRDDLSEMTVHVRSYDELIETRTVLTEALDTELLLETNDEMYKKIEDA RVAVFEVLTSRADLQQRLITVTPTDVVPAVVLAYDYHDDATRDSEIALRNGVRHEGFCPA SPLRILSE >gi|319804109|gb|ADMF01000031.1| GENE 62 64239 - 66005 619 588 aa, chain - ## HITS:1 COG:no KEGG:mma_2719 NR:ns ## KEGG: mma_2719 # Name: not_defined # Def: tail length tape measure protein # Organism: M.massiliensis # Pathway: not_defined # 53 276 25 242 901 122 34.0 5e-26 MAGKDFRLTAVLAIRDVASPVVKAFSARWVGLAKVIQSTKFTGLQKQLRLFNRSVMDVAE NAKNLGSIVGGPLAAAAGSVGFSMQQAVSSFTATGDGLDKMSQRVGVGVERLQEWGYAAV QAGASQETLEDALKDFGKHMTEIATGMDTTSKAATLFDALGIKMKDAAGNMRSVEDVFRD FADAIQRNEDPTLRASMAMAVFGEGGRKLLPMLTAGAAGLDDMSAEAHRLGIVMSRDAVK SASDLSTGFTNLHLVVASVGNTIASSLAPTITHMTGRIQTMIVANREAFSEKFAQVAERF AQSLESIDFEGIVSGILAFADYAIRAFNAVGGFNTVLYTLGAIMAGKTIMAVVALGSSVM TMIQTFSTLATIARTVGVAMAGALGPVGFVISAVAIAAGLVIANWDRIWPAIKEGAQACA DFVAAAWDRLTDRFAAVGSSILSTAKAVFRGDFPAVLRSIDDVIKSVFNLLPDSWAKACT GWYESVKKSVQNVGRIIRDFFANFDFASLVPDFVKNWFSSDSKTSGSTQSATVQRVEPVN LTASQQVSGRVAVDVTATGGASAAITDAQGGGGLDILGSVGYADRYSY >gi|319804109|gb|ADMF01000031.1| GENE 63 66138 - 66410 197 90 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2590 NR:ns ## KEGG: Ent638_2590 # Name: not_defined # Def: putative bacteriophage protein # Organism: Enterobacter_638 # Pathway: not_defined # 4 85 5 86 89 68 39.0 8e-11 MKYELKHPIEHAGEKISELDLKEPTTKMCKQLGMPYTVDLDGMPHLNTAVCAAYISKLAG LPPSVIETLALKDFNVLCWMVMGFFGEGAE >gi|319804109|gb|ADMF01000031.1| GENE 64 66407 - 66766 376 119 aa, chain - ## HITS:1 COG:no KEGG:SG0718 NR:ns ## KEGG: SG0718 # Name: not_defined # Def: hypothetical protein # Organism: S.glossinidius # Pathway: not_defined # 3 116 6 119 122 119 50.0 4e-26 MGKRLAGTCYFKVDGQQLELQGNLEFPMAKVTRETMASTGGPVGFKETIATPYIAGDFIV TSDFPTETLMESESMTITAECANGMVYTLSDAWLVGDAAFKPVDGTISLRFEGLDGDLA >gi|319804109|gb|ADMF01000031.1| GENE 65 66770 - 68263 1067 497 aa, chain - ## HITS:1 COG:YPO1242 KEGG:ns NR:ns ## COG: YPO1242 COG4386 # Protein_GI_number: 16121528 # Func_class: R General function prediction only # Function: Mu-like prophage tail sheath protein gpL # Organism: Yersinia pestis # 1 495 1 501 502 384 44.0 1e-106 MSISFNTIPSGIRVPLFYAEMDNSAAYTPTNTSQSLLIGQKLESGTAEEGVPVTVSTVAM AKKLFGRGSMLARMVDAYRTVDSFGQLVCIPLADGQSAGAAAGKVEITGTALEAGTLSFY IGGERLQVAVKEGDTGAQIAIALSDSISLSKDLPVTAGAADGICTIAARTKGTIGNGIQF ALNLRGLINGEATPSGISVTTTPMSGGTVDPEIDQAIEAMGDEQYDFIGCPYSDAVVLDA FKTEMNDTSGRWSPFRQIYGHVYTAKRGTLEELKTFGAARNDQHMTIVGVEPSMPTAVEE VLAAYVARTAVFISADPARPTQTGALTGVMASPTQNRFILTERQTLLENGIATLTTVSGT VQIERAITTYQRNSMGDADASYLDSETLHTSAYVLRRLKSIITSKYARHKLASDGTRYGA GQAIVTPSVIRGELVAEYARLETAGICENRDLFKKYLIVERNADNPNRLDVLFPPDYVNQ LRVFALLNQFRLQYAEE >gi|319804109|gb|ADMF01000031.1| GENE 66 68260 - 68715 309 151 aa, chain - ## HITS:1 COG:no KEGG:Ent638_2594 NR:ns ## KEGG: Ent638_2594 # Name: not_defined # Def: putative bacteriophage protein # Organism: Enterobacter_638 # Pathway: not_defined # 1 151 38 184 186 99 38.0 3e-20 MPFAYVAPLREDAGAQESNNGYYQVITNTFGVIVVVPNCADERGQDAGRWLEVLRPEIFR AILSWHMKPKDEFSEIVYEGGVLIYIDAARAAYQFEFSFETYIDTSDTYQKVELDALSPF DGMDVDVDCIDPSMQKDQPDGRLEGHIKVDL >gi|319804109|gb|ADMF01000031.1| GENE 67 68823 - 69287 85 154 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVQTRVDPGFRTIDYDSKELRKPLRKAGNDVRKLARKLISRRSVSDAGDFPGRDSGEMQ RSLRVKVSRSGYSVSVYPTKTQRMPVYYPAFVVYGHRGPGSETLEQSRRHKKRPGEKVAK PRKNFVPAAAEQYSGTFHETMANALANAIKPGIV >gi|319804109|gb|ADMF01000031.1| GENE 68 69244 - 69630 221 128 aa, chain - ## HITS:1 COG:no KEGG:SeSA_A4468 NR:ns ## KEGG: SeSA_A4468 # Name: not_defined # Def: putative phage head-tail adaptor # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 3 112 17 120 137 65 37.0 4e-10 MNLPQIGELNRRVKIFFTVHLPDDRLGFSKATAHEDEVWGKIEPVGSIIYWGAKQVDSGV THRITVRRIKGRTRPQDFAGVVELEVDGIRYRVQRVADLGGFNRFTVLDVEEKANVGSNT RRSWISND >gi|319804109|gb|ADMF01000031.1| GENE 69 69627 - 69962 264 111 aa, chain - ## HITS:1 COG:no KEGG:LHK_01771 NR:ns ## KEGG: LHK_01771 # Name: not_defined # Def: hypothetical protein # Organism: L.hongkongensis # Pathway: not_defined # 12 110 5 98 99 67 40.0 1e-10 MTIDTSTAVGAVSLEAAKEHLRVDWHGDDDLIRSLVLAATQMAEHELQRGLITRDGVEGF GTNAEDIPAGIRQWILVQVAHFYEQRQAATAGELKPLPFVNALLDPYRVWL >gi|319804109|gb|ADMF01000031.1| GENE 70 69975 - 71138 970 387 aa, chain - ## HITS:1 COG:no KEGG:Bphy_3394 NR:ns ## KEGG: Bphy_3394 # Name: not_defined # Def: HK97 family phage major capsid protein # Organism: B.phymatum # Pathway: not_defined # 4 385 8 384 397 187 33.0 5e-46 METKDIMEAIDRIEEKMAATSESNKAELKRLGEEQTKLARQLLDVQQKGVKVQEAVRMKS AGEMFVESENFKAMVTGRAGRARFDLDEQVDTKAEAQNPITTPAGGVVQAYRRPGILPGA YRPLTIESLFPTIPITTNAYEYVMEDETKLVNGAAFVPEGGQKPFGSTGYALKQGTIQTI AHMARVSKQLMADGPALAAYINQRLVYGVDLVVEDELVSGDGSTNHLLGIFAAGQYTPHD ATTDDLPAKSATLFDLILHAKTKVEQAFFRPNVILLNPVDWSRLQMEKNSSGDYYLGHPA SIAPKALWGLPIWPTPAIPQKKFLVGDFTQAATLWPRQGMTVEMFEQDMDNVQKNLVTVR AERRLGFGVERPKALCGGDLVLPVSTK >gi|319804109|gb|ADMF01000031.1| GENE 71 71152 - 71775 389 207 aa, chain - ## HITS:1 COG:AGc1747 KEGG:ns NR:ns ## COG: AGc1747 COG3740 # Protein_GI_number: 15888296 # Func_class: R General function prediction only # Function: Phage head maturation protease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 9 141 28 160 190 87 41.0 2e-17 MMEGSTRKFRGYASVFNGKDSYGDVILPGAYKKSLETYGMPKMFFGHRWDLPIGKWTFAA EDEKGLLVEGELTPGNPQSDAVLAALKHGTVDGLSVGFSSRGAECRELDGGGREYKSIGR LLEISIVSYPADDAARITDVRSEDLDEIDSIRNLENFLRDAGGFSKSMATAIVAKSRKLF LDQREAEAEEKASKDLLERLKKLAESI >gi|319804109|gb|ADMF01000031.1| GENE 72 71823 - 72743 403 306 aa, chain - ## HITS:1 COG:mlr8522 KEGG:ns NR:ns ## COG: mlr8522 COG4695 # Protein_GI_number: 13477030 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Mesorhizobium loti # 1 275 107 388 410 114 29.0 2e-25 MTVNRLLRGNAYARIERDSSGEPIALIPVSPDQMEVSVVGGGEVYTYYQDGAISVWAPEN VIHWKGIGNGFMGLSKLEFMRASMNEAVHAQENANALFGKGSKPTGVLYTDSALNENQLK NLMSRFKVQMTSSTGGLIIADRGLKYTQMSLSPADAQLLETRRFSVEEICRWFGVPSVLV GASGVTTWGSGIEQITKGFHTYTIGPLCKQLEQALERRLIGVDQTELTIEFKTDAFLRTD QQTRAAFYSQMAQNGVMSRNEIRKLENLPPVPGGDDLTAQSNLVPLHRLGKVQPANSPVN GEPVRQ >gi|319804109|gb|ADMF01000031.1| GENE 73 73061 - 74761 762 566 aa, chain - ## HITS:1 COG:ECs1598 KEGG:ns NR:ns ## COG: ECs1598 COG4626 # Protein_GI_number: 15830852 # Func_class: R General function prediction only # Function: Phage terminase-like protein, large subunit # Organism: Escherichia coli O157:H7 # 12 550 6 534 553 296 33.0 8e-80 MVSKNYCGIARQYMEGVLSGVIVACEWVKLACQRQKEDLERFAASGLYIFNEAKGNEVCR FIELLTHTKGALAGKRIVLEPWQIFILTTSFGWRRRADGGRRFRRVYIEVPRGNGKSSLS SGVGLYCLVADKEPGAEVYSFATTRDQAKIVFGDAKQMAKQNEPLRQRFGLEVLANALYV PSTNSTFQAKSAEGSTLDGLNTHLAVIDELHAHKTRDVYDVVETSLGKRLNSLLWVITTA GFDTSGICYEVRMMVTRVLGKEISDETQFGVIYGLDDGDDWTTEEALMKANPNWGVSVMP EMVLSLQKKAIALPSAMNNFKTKHLNVWCSASTAWMDMQAWKRCEVPEMSITDFEGRKCF IGLDLGSKSDLTAKVLIFPGEDDEGRTTYAVFCQCYLPRRAVEQSTNSQYVGWAEEGYLI VTEGAMTDFNVVEEDLRLDLSRYEVSAIVYDPWQATQLATSLAEDDAPMIECRNTVQNMS DPMKSLEALVLDHRICHDGNPVLTWMMGNVVAKVDAKDNIFPRKERYEEKIDGVVALIMG LGNAIVDDNDRWAGFVESSDQTFFSW >gi|319804109|gb|ADMF01000031.1| GENE 74 74751 - 75209 187 152 aa, chain - ## HITS:1 COG:no KEGG:XALc_2630 NR:ns ## KEGG: XALc_2630 # Name: not_defined # Def: hypothetical protein # Organism: X.albilineans # Pathway: not_defined # 2 150 3 147 154 90 38.0 2e-17 MGRPRKPDAEKKALGTFQPCRSLEVQAKTNTELSSQPPKCLTKEAREAWRIAVENAPKGL LAVTDFTVLERWARNYALYRKLAKAVDHDGTTIVTEKADGTVRRELNPDAKLLVQIQTVL LACERELGFTPSSRARVNVATKDEPVNEFDGF >gi|319804109|gb|ADMF01000031.1| GENE 75 75698 - 76054 207 118 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDQLEDLVKDFQTPKVAKVNLKALRDRDEASGRLVVDAFTPRFVDLEQRLDRLERNSRKT FRRTVLAGIIGGFGAAALWAAASYLLKRYVITPDTTPATTPTTTAHKSHNASNDMATP >gi|319804109|gb|ADMF01000031.1| GENE 76 76073 - 76423 337 116 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLLVLTAVAALVATTAVEARGGFGGARGFSGGRSFSKSAPARVYAPSRTTVIKKNTTI IQSAPSSSSGGGFWSGVAGAAVGSMAGSAVYDALTDDKKEEVATPVQAPQPAPQVP >gi|319804109|gb|ADMF01000031.1| GENE 77 76566 - 76877 191 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARLIAEAGAMSGIFESDSPVDIAKAVQVNRAWQGMPCTTHSDRCIKALIAALYAYPVSR EHMLSLIWRHFKLRMRYRDVDNFLTRGRTVIRNRLEKILHRPL >gi|319804109|gb|ADMF01000031.1| GENE 78 76955 - 77194 135 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGQPATLKSGTRLNVQLIIQPPDRRRRDESNMVERCKSFYDGIADALGFDDCLFHHREQV WLSPKKPGTIVIAIDWEEE >gi|319804109|gb|ADMF01000031.1| GENE 79 77332 - 77613 149 93 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTDLFSALKVYGTCPVVCLSCVHFAGAAYDQGGFLLAKKSGYCSLRIKKGDWNVLQRIDS PRQCKNFDEAPDEVKKQRLKALDYYGRKFRGDS >gi|319804109|gb|ADMF01000031.1| GENE 80 77610 - 78173 170 187 aa, chain - ## HITS:1 COG:pli0001 KEGG:ns NR:ns ## COG: pli0001 COG1484 # Protein_GI_number: 18450287 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Listeria innocua # 36 146 15 117 164 67 28.0 1e-11 MTVTSWQTFNAKMEEVKSAVLAWGEDIETSVNRGKSLIFVGKTGTGKTHLGTAIVMGALR KGFVAKIVDCSLLLSEIYETYGKDDAGRAKGEAAKLIRAYIDLDVLVIDEIGRSPISSHG ADRLFEIIDGRYKQCRPTIAISNLPLVGKDIQDASLRTVLGDAAISRLSDGGQCFAFDWK DYRWRTK >gi|319804109|gb|ADMF01000031.1| GENE 81 78582 - 79277 176 231 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLALNYVKKNLRAGGFAQAVLAYLADCMNEADGKCFPSRETIAEYFSSEDDPCTVKRVDR ALARLRELGFIKSECVPHRKQPAKGIEGGWHNEYSFPGLSGGAPKTDATHRNGVDPIAGV SPTVGRGSPQIGQGVAPTVERGSPHRGVEKQKETEVKQKLNRRETVVAHTHAKNLRLTTN FSTRQHELYPKSKQLLKALLRKNRRSHERLALRLRLSRGLTIFPSNFGRTG >gi|319804109|gb|ADMF01000031.1| GENE 82 79295 - 79525 110 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTLREIKRASPEQSCLYIDQMGGTGAVSRICEVSSAAVSQWRRYGIPHARLQFLRERLK NQKLLEQAQALIAEVK >gi|319804109|gb|ADMF01000031.1| GENE 83 79646 - 80344 351 232 aa, chain + ## HITS:1 COG:NMB0910 KEGG:ns NR:ns ## COG: NMB0910 COG2932 # Protein_GI_number: 15676805 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 25 226 23 232 238 74 28.0 1e-13 MAPVDSTLSARLASLFDKSTGKTQAALARYCGVSTSAVNQWTKSGKIFDSNLRKVAEFFG VSQRWLQTGEGEKTAQVLSYGVGDKIPDGFVAIPEYRLEFSAGSGSEPTWELIHDSEDCW YRESFFQKRHLLPSQCKRAKVCGNSMEPELQNGDTILFESFTETRPGCVHISDGGIYVLT IDGEYRIKYLSKIKNGLLVSSENSAYRPEEYVGDECDRLKILGRVLEVNRSL >gi|319804109|gb|ADMF01000031.1| GENE 84 80439 - 80795 230 118 aa, chain + ## HITS:1 COG:XF1703 KEGG:ns NR:ns ## COG: XF1703 COG3657 # Protein_GI_number: 15838304 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 21 112 5 97 102 80 47.0 6e-16 MPKPILTPKTLSALSQGNFYKIITTEEYSTWKAGLRDAVALRAIRARETRIAAGLWGDVK RIGKISELRVDVGPGYRIYFTIRGTEVILLLLGGNKRTQQADIAKAQSMADMDIEEEQ >gi|319804109|gb|ADMF01000031.1| GENE 85 80792 - 81052 132 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTNTIKVKPYNPVNELHSDDEIIDFLVDCYKEDSEGLTLARGMAFAMDSIGEPKTALLMI YVGMRLGREAAAQDKRINFSRSAPAI >gi|319804109|gb|ADMF01000031.1| GENE 86 81632 - 82105 148 157 aa, chain + ## HITS:1 COG:no KEGG:AZL_011870 NR:ns ## KEGG: AZL_011870 # Name: not_defined # Def: hypothetical protein # Organism: Azospirillum_B510 # Pathway: not_defined # 5 128 2 137 172 64 30.0 1e-09 MTNENTTFRPLDSLQVMAYIVDMCRKQHIEVNVTKLQKLLYCCYGVALAQLGIRLTKESP QAWQYGPVFPKTLEYFRKHPIESLTDSSVLESTASDELKKLLIGTLTYFGQFSASQLSTW SHQIGSPWYRSSNGGANLREEIDDTSIKCYFRNEVLA >gi|319804109|gb|ADMF01000031.1| GENE 87 82102 - 82422 298 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFPKFKESLKPQIDSKSEVTPDTDLLLIQVAHQKDEENNRHKIKIYALRLFAGLGGTMI IVYIYHLLMPSWARWLSPSEMAAIKDLALSIMTGVSVSLAIKFTTK >gi|319804109|gb|ADMF01000031.1| GENE 88 82582 - 83013 307 143 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRDLKTLVTLLERIEDDNLEQFIDHPLGEDVDERKLGKLISNKRQILLGHLLLLKEAGY TGHLTVTVNEGEDGLELCCSIPRLTMKGHDLLAMLRSKTLYQRMKEILDGTGLPLTSDTL DLIQHEASDELIREWASKKKLQS >gi|319804109|gb|ADMF01000031.1| GENE 89 83324 - 84178 639 284 aa, chain + ## HITS:1 COG:XF0684_1 KEGG:ns NR:ns ## COG: XF0684_1 COG3617 # Protein_GI_number: 15837286 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Xylella fastidiosa 9a5c # 4 110 254 362 388 108 53.0 2e-23 MSDVIAFSFENNKVRTLGTPETPLFIAADVCAALKHSNPRQALRDNVDPEDQIKVEIETN GGRQTVNAVNESGLYALIFGSKLDTAKRFKRWVTSEVLPTIRRTGRYEAPKPEYITVEHR WAIQKAVGRKARGQSVNYQTVYRALKDHFKVEKYTHILEADFDAAIAFIESLPPMQLPPL NAPAPRQLSAAPQKEPRKFLVDEKYLERQRTFIYNWRYLYKDSLELILELLYRMQSPLAP ALWEAIHDMYLWKAERDLAKLGYDVKELDCYKSWASHQPKRLTA >gi|319804109|gb|ADMF01000031.1| GENE 90 84246 - 84407 117 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLKKLLGHNERTGFSDTAIIFCAFLTGAGISALGISLCLLMQWAVLNGYVLF >gi|319804109|gb|ADMF01000031.1| GENE 91 84419 - 84694 316 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVKVITTALQHLVGGAALNVALGARLELATQEAIAASGREAIIVYQWYSRCVKDPSLED FESWLSKKISKNKEFSQLVQDWHNFYKSRGA >gi|319804109|gb|ADMF01000031.1| GENE 92 84673 - 84849 109 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVFECVGGCAAFLAFFARADRVLIALRTSRLNSCLGRRCGWEGMLIMQAPHYAPRDL >gi|319804109|gb|ADMF01000031.1| GENE 93 84886 - 85143 156 85 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKPVYFFGTRAKELAKKLHPVTNTRCLDLWTDGAEHYYLRTMRACGNRWRLHSFLLLPDW RIKAKNNHAQKPHHLDSLCLHRSAP >gi|319804109|gb|ADMF01000031.1| GENE 94 85359 - 85898 348 179 aa, chain + ## HITS:1 COG:BH3544 KEGG:ns NR:ns ## COG: BH3544 COG5377 # Protein_GI_number: 15616106 # Func_class: L Replication, recombination and repair # Function: Phage-related protein, predicted endonuclease # Organism: Bacillus halodurans # 53 161 104 200 320 75 39.0 7e-14 MIQRVYHQLASNLDHYIGTSTPTQWALANIDGAVINHRISAAVRLTNPASIWNVQKLMLT TDTLLECKTANALMAEHWGLSQEAEIIKREITSKHKIPLYYETQVQWYMAVTAAKLCYVA VLIGGQDFRIYAVDRNESIIQMIATRCFDFWMKHVRAGVPPEPIIDDDVKNLLQKYLDV >gi|319804109|gb|ADMF01000031.1| GENE 95 85986 - 86339 122 117 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSNYPLSSLRTLTQYAKDAETSQSDALREYMYAMLLVTQFSVLQMKAAVRGKKTADTGL WTILAEMLTRMAIFIHEGDHRREVSRKSCARSIAIAATELYRRELDRKRGNKKKPEL >gi|319804109|gb|ADMF01000031.1| GENE 96 86361 - 86603 226 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIFSELTIDELRDKANWCRSYLPFADIEKCKEKAKEMIDEGENLQNIISYLALIEKQIKK LEDEGTESSSCCYEQKEITK >gi|319804109|gb|ADMF01000031.1| GENE 97 86600 - 86860 256 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRARNTTDISPIGVLMLDVKQVAASCGIGTSTVWKLVKLGTFPRPVYFGPKVARFKAEDI QKWVANLEPAATPLIGSHTEQVKETA >gi|319804109|gb|ADMF01000031.1| GENE 98 87302 - 88903 996 533 aa, chain - ## HITS:1 COG:TVN0161 KEGG:ns NR:ns ## COG: TVN0161 COG5421 # Protein_GI_number: 13540992 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Thermoplasma volcanium # 6 517 1 451 459 152 25.0 2e-36 MLCKEMTEKPDYILTFDRPKNTEIKKIGNNWYLYERFSKYDPTIKRSRKVSGRCLGKITP DGLIATKRRLTPAERPAAVLEETVEVGASLFMWKRTEDLRKRLQVHFPDQWQQIYVAALL RLLREPRFKRLQLHFENSILSHVFPKLSFTASDNAAMLRTLGKKRQAISSFMREDIDKKS AFILFDGHRLITSSKTMPFAELGYDSKQRYMPQINLLYIYSLDENRGAPVYYKQFIGSTP DVSAFADVLTESTLRHSDCTIIADKGFASESDFGLLDSKNLKYVIPLRRGSRFVKSKLPL TPMSYENMFPFNGRAIQALKIAEAGFNVFVFFDAQLYANELADAVERGEKTNNTNAVKLD SEMKRRAKGTPRLTNEELQSLQPHDLMEIHSEIPEMGTVTIRTNRTDLNCMQVYRVYKQR QAIEQFFRTYGASLDFEASYMRTQATQEAWLFLNHLSSMMGMDCITDIAAMNEDKNISLE DLKQTLGKIMATRVQGEWLVAPVKRSVAKLLDKFDFNPSPELIEELLAEGTPN >gi|319804109|gb|ADMF01000031.1| GENE 99 89081 - 89239 99 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLALVFTPSSDPTFPQPIYFGPKVARFKVEDVRRWVKQLEAGKPTEDPLAA >gi|319804109|gb|ADMF01000031.1| GENE 100 89279 - 90142 359 287 aa, chain - ## HITS:1 COG:no KEGG:HS_1527 NR:ns ## KEGG: HS_1527 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus # Pathway: not_defined # 1 276 1 278 288 287 55.0 3e-76 MKGKIQLFEDHQVRSAWDDQKEEWFFSVVDVVSVLTGSSEPKRYWSDLKRKLKKEGANQT YENIVRLKMTAPDGKGRLTDAASIEQILRIVQSIPSPKAEPFKQWLASVGKERIEETVDP EQAIVRAKMTYQAKGYSPAWINQRIQGIQVRNELTDQWKTHGVQEGLQYATLTNIIHSGA FGISVKDHKKLKGMKGGNLRDNMTTLETALTMFAEATATEMTKSQNPQTFEENKMVAQKS GGVAGRARRDAEKQIGHSIVSKKNAQDLLAETSSDEIIEAEDLKKLK >gi|319804109|gb|ADMF01000031.1| GENE 101 90139 - 91485 369 448 aa, chain - ## HITS:1 COG:AGl2007 KEGG:ns NR:ns ## COG: AGl2007 COG0582 # Protein_GI_number: 15891121 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 448 1 391 396 89 26.0 1e-17 MPRVAVKMTDKKLRSVTSETACGVVPGLYVRPRSRSDGSIVKYFVLRDRRTKRCFNLGSY PQLSLSEAFMMAADWRRMLDDGIDPSEVKKQKAEQLTRLLESPREPSVKDIVYSWIRFNE ERGRWKNALKPKELVWDGYCRNHLSASLLSMSAKDLTAERVHEEIGEKWRTMIDTPERIL SDMRNAYDWAMRQEMIPAMLNPCQVKNGKLGDLLALDRPDGGHEPALHPKRMPAFFAELM KLVPQSQTARCLAFAILTSARNTTAREATWDEIQQDDDGHWLHVIPRGRMKMKSDKIPFD RKTPLSPQATALLDSAPRFPDDEKGFIFPNINKGRLSAFSRDSVRALLKRMHVKQKKIDG VGWVDLDEKTRDGQPRIVTLHGLARATFNTWAKDAKGYGHKAFPRDLRESCLDHRNESYQ CAYDREQALGDMRDVYEAWGEFCWKEMK >gi|319804109|gb|ADMF01000031.1| GENE 102 91836 - 92180 497 114 aa, chain - ## HITS:1 COG:RSc1583 KEGG:ns NR:ns ## COG: RSc1583 COG0776 # Protein_GI_number: 17546302 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Ralstonia solanacearum # 14 104 3 92 104 95 56.0 3e-20 MTEEFELTAAEIYTLNKASLAEALVDHVAGLDRPHAKLIVETFFELVAEHLEKGDTVKIP GLGNFSVRDKVARPGRNLKTGETVTITERRVVTFHPSGTLNSRVTTNLIAGGED >gi|319804109|gb|ADMF01000031.1| GENE 103 92257 - 94677 2453 806 aa, chain - ## HITS:1 COG:RSc1582_2 KEGG:ns NR:ns ## COG: RSc1582_2 COG0072 # Protein_GI_number: 17546301 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Ralstonia solanacearum # 140 806 1 665 665 652 52.0 0 MIFTEEWLRQYVNPALGTDELADALTMAGLEVEEVRTIAPAFSGVVVGEVLSCRDHENSD HLHVCEVNAGTGETLQIVCGAPNVRAGIKVACATIGAVLPGDFRIKKSKLRGVVSMGMLC STRELGINEDHNGIWILPDDAPVGVDIRQYARLDDAKIELKLTPNRGDALSVVGVARDVH AITGAPLTLPAMDPVAATCSCTLPVDVQAPDLCGRFTSRILRGLNAAAPTPDWMKARLER CGMRSISALVDISNYVMLELGRPTHFYDLKKIPADRLTVRWAREGESVQLLNGETVALDP WYGVICAGDEPECLAGIMGGESSSISTETTDLFIESAFWFPKAIQGRCRKLNFSTDAAYR YERGVDFASTAEHLEYITRLVLGICGTPETTVGPVADVQTALPTRAPVKMRVDRCRKVVG VEIPVESMETSFKRLGFDFTYDDGVFTVVPPSFRFDIEIEEDLIEEVARLYGLEKLPDRP PLARSAMKPSREERRDQHALRREMAEQGYQELINFSFVPEDWERVFAGNDSPIRLLNPIA SQLSVMRTQLIGGLVDILKYNLNRRAERVRVFELGRVFFPDPSIEEGPWTVKGVRQPQHI AGLAYGDADDKQWGKPARRVDFYDVKGDLERLAAPMKLRFVKEAFPALHPGRSAAVYLGS KRIGFIGELHPKAAQAYELPHAPVVFEVEVPALLDRPLPNYVPVSKFQSVTRDLAVVVPA EMEVEKLFDAVAAAKKKDLRLAPLANFKLFDLYRPQDAVDTVAEKSLAFAIELSSRTEEA LTDEQADGAVRAILEALEGVGAHLRA >gi|319804109|gb|ADMF01000031.1| GENE 104 94693 - 95709 1233 338 aa, chain - ## HITS:1 COG:RSc1581 KEGG:ns NR:ns ## COG: RSc1581 COG0016 # Protein_GI_number: 17546300 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Ralstonia solanacearum # 3 337 4 343 344 474 67.0 1e-134 MQELSELIESAQREFAEANAAAALEDAKARYLGKTGSLTMLMKELGRLAPEERRARGQEI NRAKQQVEAALNARREALAEEALAAKLAQESIDVTLPGRMDAKGGIHPVMRTWMRIEEIF RSIGFDVADGPEIESDWFSFTALNNPPNHPARSMQDTFYVDRNDDEGRPLPLRPHTSPMQ VRYARTHQPPIKVISPGRTYRVDSDATHSPMFHQVEGLWLDTDISFTDLKGVYSDFLRCF FETNDLVVRFRPSYFPFTEPSVEVDMMFTSGPRKGKWLEISGAGEVHPNVVRNYGLDPEK YIGFAFGSGLERLTMLRYGVDDLRLFFEGDLRFLRQFN >gi|319804109|gb|ADMF01000031.1| GENE 105 95751 - 96011 116 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVQDLRREKERLSIEGCKKDALLRRSFFFPAQSLLRALQAQIPVSQRLPTGSRPFSHLQ FSAAAVEPPKAENVNTKNGFRSMSAS >gi|319804109|gb|ADMF01000031.1| GENE 106 96144 - 96494 460 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|17546299|ref|NP_519701.1| 50S ribosomal protein L20 [Ralstonia solanacearum GMI1000] # 1 114 1 114 118 181 78 1e-44 MPRVKRGVTARARHKKIFTLSKGYRLRRNNVFRVAKQAVMRAGQYAYRDRRDKKHVFRRL WIARINAGSRANGLSYSVFMNGLKKAGIALDRKVLADMAVNDKDGFAALVAQVKNA >gi|319804109|gb|ADMF01000031.1| GENE 107 96516 - 96713 237 65 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|114332289|ref|YP_748511.1| 50S ribosomal protein L35 [Nitrosomonas eutropha C91] # 1 65 1 65 65 95 70 8e-19 MPKMKTKRAAAKRFKPRASGSIKRAHATKRHILSHRTTKNKRHLRGMVTVHESDIKSVKR MLPYA >gi|319804109|gb|ADMF01000031.1| GENE 108 96878 - 97351 543 157 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 1 156 3 159 159 213 66 3e-54 EVRLTGVDGAQIGIVRTSEALRMAEDAGVDLVEVAPNAVPPVCRLMDYGKFRYQEQKKAQ EAKAKQKVVQIKEVKFRPATDENDFQTKLRSLKRFLEDGDKAKITLRFRGREMAHQQFGT QLMDRVREELVDIAQVEHAPKLEGRQMIMVLAPKKKR >gi|319804109|gb|ADMF01000031.1| GENE 109 97446 - 99356 2589 636 aa, chain - ## HITS:1 COG:RSc1577 KEGG:ns NR:ns ## COG: RSc1577 COG0441 # Protein_GI_number: 17546296 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 630 1 630 635 857 65.0 0 MASVTLPGGSKREYEGPVTVAQVAASIGAGLAKAALAGRVDGKLVDLSHVIDGDAAVAII TARDPEGLEIIRHSTAHLMAQAVKELFPEAQVTIGPAIENGFYYDFSYTRAFTPEDLKAI EARMDELVKKNIPIVREEMPREEAIDFFKALGEHYKAEIISSIPAGEVISLYRQGDFVDL CRGPHVPSTGCLKVHHLMKVAGAYWRGDSKNEMLQRIYGTAWATKDEQKAYLEMLAEAEK RDHRRLGRELDLFHLQDEAPGMVFWHAKGWALWQVIEQFMRRVYQDNGYEEVKAPQLLDR SLWERSGHWAKYRDNMFTTESENRYYALKPMNCPGHIQIFNSKLRSYRDLPLRIGEFGQC HRNESSGSLHGLMRVRGFTQDDGHIFCTEDQILAECEAFTALVQKVYKTFGFTDIAYKVA TRPAMRIGEDAVWDKAEHALMASLDALGIKYEVLVGEGAFYGPKIEYHLKDCLGRSWQCG TVQVDFQMPGRLGAEYVAEDNSRKIPVMLHRAILGSLERWIGMLIEEFAGAFPVWLAPIQ CAVTSITDNQGAYAKDVAAKLHAAGLRVQTDLRSEKINYKIRELSLQKLPYILVVGEKEA QTGTVSVRARGGENLGVMSLDAFIERISTENRERTR >gi|319804109|gb|ADMF01000031.1| GENE 110 99860 - 102034 2277 724 aa, chain - ## HITS:1 COG:RSc1576 KEGG:ns NR:ns ## COG: RSc1576 COG0317 # Protein_GI_number: 17546295 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Ralstonia solanacearum # 30 723 43 745 746 652 48.0 0 MDATQLTKTADPAAARSSVEPLYYGRTLSTGESVMAHADGVANILRAIRNDPELISAAYL FSVPTLVQKPDEWIEKSFGENVAGLVRELGKMNDLSKRARSENKESSAAVQPEALRRMFL AMSQDLRVVLLKLASRLQTLRWFVSSQAPGAVEFGEETLAVYAPLANRLGIWQIKWELED LSLRFTHPAEYHQIAAELDESREERLEFMALAVKKIQALMISHGIQAEVSGRPKHIYSIW KKMQRKHLRFDQLFDVRAVRIIVETVEQCYEALSIVQEHFTVLSKEYDDYIANPKPNGYQ SLHTVITDQLGRPIEIQIRTRAMHEFAELGVAAHWRYKEAGNSNGASIAEEQRVAWLRQL LAWRSDVGGGAAEQSAQAPNAEAGQKGQPAAPAVEDDHVYCLTPQGRIVELPAGATPVDF AYQIHTQLGHRCRGAKVDGMMVPLNTKLKTGQTVEIIAAKVGQPSRDWLNPELGYAASPR TRNKVRQWFNAEQLAQQIAEGRDRLDKELARLGKTAVKLDDLAKRLGFGTVDELCVAFAK EEITLTALAQAVQPPKPAPAPAPEHDLVLRGASSAASKGKVLVVGMDSLLTQLARCCHPV PPDEIVGYVTRGRGVMIHRADCPNLKNMVDQDHDRLIEVSWGRAGDDALYPADVLVIASD RSGIMKDVTEVMQREKVHVTALNTQILKGDQHMRFSLEVKGGNAMQVLLKGLRAVHGVLS ARRL >gi|319804109|gb|ADMF01000031.1| GENE 111 102301 - 104907 1332 868 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTTECTSECARGVGRSVHSTFVFPHHLGVRLVSRGGMRSGGLPCLSALSLSLMTAGFLF CGAASPVLANSVYGDISDPYMVSDHVVLEDYYADHSATNVTQSGHLELLDTNFYTDNLEV SGQLTVGSGAYLENVYGPAEEFAGTAELHSGARLQVEVDGYAELWEVVSRGGSLILSAAA TEASDVISNAEVHIQKLTADMERTLVTVGEDNAQADLFSTLMIEELSVSSGGHLDIRVGS GGAFVWTHAAFDDGNEAGTDPIENFFFTPAAAPQGAVRVQKNASLTRGMSIAVGGSSTER EAASNRWNLWVGSGGVLSIEGEHTTLTLEDGTKARFDAGSTLLLSSLIRTDEDDALQDAE DGADSPAPSQSADRKAASGVPAAGTTFKVEGLDLSRAEVSGLENLTLKVEGLLETGGLYF DASGTVVGVLGRPTFEGPLAAMLQELYENRTSLLVPTFYRTLFTNTSDVVEGTMMAVATA ASSTGTNERLMQNAVSTSMRLASAARMAEAQAARAAEIRSLEAQRAASRKAAADSEKADP DWTERLKAWRTNLQEHLPAIVQDVPVFIGASAGSTKVEVSTPVSKPFTVKSEDTTFDAAV IFGREDWRVGLMGSFTTRSLDTLYKQGAAAELGVDSESDEASASFFVRRRLGSGWGTVDL TWLEADDRYRMGAAREYLEMEKLKRRIYSSGFLYEQPLFAGSALSGSGPDRSWVISGFAG LRYLRVDTAEGTWRSPAGAVLTIREASAQAVAATAGGVITGALHFAPGAGYWGQVKPRRL DVSLTAALNSTVGGDRDVMVQGPAGGSTSSATVMTAAEPERFQWNAELAAGIEWRDSRLD FSGFASRAGSSVRSAGGSVKMSWRLNLL >gi|319804109|gb|ADMF01000031.1| GENE 112 105275 - 106648 1748 457 aa, chain - ## HITS:1 COG:MA1691 KEGG:ns NR:ns ## COG: MA1691 COG2848 # Protein_GI_number: 20090543 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 3 457 15 464 464 494 58.0 1e-139 MLTDREVLSTINMLRSEHLDVRTVTMGINLFDCASSDFDTFAYKVRSKIFRYAEKLVETC DLVGDRYGIPVVNKRISVSPIGTVGASFSRDEMVAACRVLDESAKEVGVDFIGGFGALVD KGMTPGEKNLIDALPEALAVTDRICSSINVGSTKAGINMDAVRLMGQRILDVAEATRDRD AIGCAKLVVFCNIPQDVPFMAGAYLGVGEPDVVIDVGVSGPGVVKKALDRAFKAKGEFLT ITDAAEVIKHTAYKVTRVGEIIGNEVANRLNLPFGVADLSLAPTPAVGDSVGEIFQSLGL SSIGAPGTTAILAMLNDQVKKGGVFASSHVGGLSGAFIPVSEDSAIEAAARSGALTLEKL EAMTSVCSVGLDMIAIPGDTPASTISGMIADESAIGMINGKTTAVRVIPVPGKTVGDVAH FGGLLGEASIIRVPGGDASGFVKLGGRIPAPIHSLRN >gi|319804109|gb|ADMF01000031.1| GENE 113 106705 - 107301 668 198 aa, chain - ## HITS:1 COG:no KEGG:Ddes_0621 NR:ns ## KEGG: Ddes_0621 # Name: not_defined # Def: amino acid-binding ACT domain protein # Organism: D.desulfuricans_ATCC27774 # Pathway: not_defined # 16 195 1 184 187 125 39.0 7e-28 MTEAQPAQTTEINDGLHRTNVAVFGLDRPGIVAVVSNALTRRGVNLEQVNQMALHGQFAL MCVIQKPAGLSNEQIQQELEAEIARRKFDLAVMVIDFKAPTPQPESEPYVVSVWGTDRND IIANFSRIFAEQKINIESLRAFPIEDGMSLQVFEVSIPLNVDRRALHRVMIDRARAMNLR CNLQHRDIFEAIHRVKVE >gi|319804109|gb|ADMF01000031.1| GENE 114 107536 - 108420 632 294 aa, chain - ## HITS:1 COG:RSc1119 KEGG:ns NR:ns ## COG: RSc1119 COG0084 # Protein_GI_number: 17545838 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Ralstonia solanacearum # 8 283 2 269 271 147 36.0 2e-35 MTARAIQFIDTHSHLQVERLDGHRAQWLAQAREAGLENILLCAGAPEDWERTLSAAHEWG LGAMLGIHPLWLDSTTPAELVGLRELAESLLDDPHFIGLGEVGLDGFEPGLDQHKAEQVF LEELKIARDLDLPLSIHVRRTASKTLGLLRRVYGSPGKTGFQPVRGAVHAFNGSDAEREA FLAFGLVLGFGGACTYDGSKRIRRHLSELADGAWVLETDAPDMPPSSRRDAFALGHSTLD TRPADILEAARTAAQLRGTTLAAAAASARAAAIAAFPRLETLLRLPESFGRQTE >gi|319804109|gb|ADMF01000031.1| GENE 115 108435 - 109148 284 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 32 212 20 199 223 114 39 3e-24 MNNAQNHPQRSVVLEASHVVKSYREGTSELPVLKDVNLRIHAGEAVAVLGASGSGKSTLL HVLGGLDGLDAGRVAIAGEDLAALKESELDRLRNRSLGFVYQFHHLLPEFSALENAAMPL FIRRLPKREALSRAQQALEAVGLGDRLEHLPSQLSGGERQRTAIARALVTQPACVLADEP TGNLDHETASQVFTSLLELAHTQGTAVVIVTHDRELARRCDRAVELKGGVIVDADRF >gi|319804109|gb|ADMF01000031.1| GENE 116 109141 - 110397 1357 418 aa, chain - ## HITS:1 COG:RSc1117 KEGG:ns NR:ns ## COG: RSc1117 COG4591 # Protein_GI_number: 17545836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Ralstonia solanacearum # 1 418 1 416 416 445 55.0 1e-125 MQTPFEFMIGLTYTRRGRRGRRKDGFMSFISGMSVASIALGVAALIIVLSVMNGFQKEVR DRMLSVIPHVEIRASKGALTDVEGVEKVLQAQSDVVAVAPFVEGQGLFSSGAVVRGAVVK GIDPAKEPGVSELAQSVSGAELSDLKPKAFQVILGQALARQLRVHIGDKVALLVPEGNMT PAGLIPRMKQLTVAGYFSSGHYEYDSTYALVNIEDAAALYRTGGPQGLRVKTTDMDRAPQ IAAKLVSVLPSGLYATDWSRQNRTWFAAVQVEKRMMGIILFLIVLVGAFGLVSTLVMTVK EKQSDIAILRTLGASRASIMSIFVVEGTIVGLVGVLSGVAAGLLIAENVGAIVSAIESML GVEFLPQEIYFISSMPSDPRMSDIVPIAVLSFLLSLAATLYPSWRASKIHPAEALRYE >gi|319804109|gb|ADMF01000031.1| GENE 117 110636 - 111733 862 365 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302859479|gb|EFL82558.1| ## NR: gi|302859479|gb|EFL82558.1| hypothetical protein HMPREF0189_01053 [Burkholderiales bacterium 1_1_47] # 1 296 1 283 347 84 26.0 1e-14 MTTCFYLLPGARLPEAAARETAAVLAKSDPASLEAWTALGTGREPPGLQRLAEPLHDRSP HQAWLWKVLTHRSGAPITAPYEWIASGGPVLDQEFWKLTPWQRNSMGQLEAVELHESEMP AAACALDPIAAHAGMRLMISGTTLFLCRRKPWAFSAAPFRDLADCVGAGASLAACMTGSD KPEAENLLEAFTAAAQTAAGKLPSIEGFWLSGGGAYTPIFPPSTYRAVACDDPVVRAWAA AAGIPRTALMPVRSGEREQERWGKAFVDAPIGERIIVIEHLLEPWRRSDWSAWREALPTA LGELARWRSREKAAGIDDAVFVLFGNAGAATLLPTPKSFNPLKRFKRSVLPLESWFIDNF AGEVP >gi|319804109|gb|ADMF01000031.1| GENE 118 111730 - 113421 1768 563 aa, chain + ## HITS:1 COG:RSc1115 KEGG:ns NR:ns ## COG: RSc1115 COG0608 # Protein_GI_number: 17545834 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Ralstonia solanacearum # 1 563 1 565 565 554 53.0 1e-157 MTRILSRPYDQHAADRLALSGFLPPIARALAARGIQVPSDLEQEWAGMLPPAMLEGTREA AERLALARERHQAVTIVADYDCDGATACAVGIRGLRMLGITANYFVPDRVLHGYGLTPNV VDIVAARTPKPDLIVTVDNGISSAAAVDRARELGIDVIITDHHLPGAELPRAQAIVNPNL TGSTFPSKNLAGVGVIYYVLLALRSLLRERGVFDAKTQPRLDALVDFVALGTVADVVKLD KNNRILVSQGIRRIRGGRTHAGLEALFAIAGRDIRTAGVRDFGFAVAPRINAAGRLGTME NGIECLLSDDPAAALDFAESLNSINTERRELESEMQQLAEAALANIDLDHHATFTIFNPS FNEGVVGLVAARLKERIHRPVIAFAPTENGELKGSGRSIPGIHLRDALDLTAKALPGVVL RFGGHAMAAGLSIKPEGFKDFQAAFEEVIRSRCDASVFERVVLTDGGLAPDEITEALCQE IDEQIWGQGFEAPLFANEVHVLSQTLLKGTHLKMMLELGGSRFDAIFFRRKEPLASLTRI AYRPSVNEFRGRRTVQLVVEAAE >gi|319804109|gb|ADMF01000031.1| GENE 119 113453 - 113698 139 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRDAQQHVRRPEAVYNFRFPVFSGRVGDFVLQKFSKPDALFSTTNTLYPHRSEMEAERI NQIEASIDDLTRRLNELRGYL >gi|319804109|gb|ADMF01000031.1| GENE 120 113676 - 114740 1182 354 aa, chain + ## HITS:1 COG:ECs3763 KEGG:ns NR:ns ## COG: ECs3763 COG1186 # Protein_GI_number: 15833017 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Escherichia coli O157:H7 # 5 347 23 365 365 431 63.0 1e-120 MNFGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIA DAGELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGG TEAQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGI HRLVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTE SAVRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIG WGHQIRSYVLDQSRVKDLRTGVETGNTGGVLDGDLDQFIEASLKGGVNAVPAAE >gi|319804109|gb|ADMF01000031.1| GENE 121 114857 - 116386 2019 509 aa, chain + ## HITS:1 COG:RSc1028 KEGG:ns NR:ns ## COG: RSc1028 COG1190 # Protein_GI_number: 17545747 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Ralstonia solanacearum # 8 507 4 510 510 672 66.0 0 MAQAQQNPQTVQAPAEDENHIIAERRAKLAALRAAGVAYPNDFKRTDLFGDLTAKYGAMT TEELEAAAPEVACSGRIMLKRIMGKASFCTVRDFTGTMQYFVQQNEVGPDAYAAFKTFDL GDIVAAKGVLFRTHAGDLAIRVKEIRLMTKSIRPLPDKHKGLQDTELCYRQRYVDLIMNE ESRNRFLTRSKAIAAIRAFMLNHRFLEVETPMLHPIPGGANAKPFITHHNALDMDMYLRI APELYLKRLVVGGFERVFEINRNFRNEGVSVRHNPEFTMMEFYATYWTYRDQMDFTEELL RTVAKEATGSMVLQYQGHEIDLSKPFHRLTPLAAIKKFAPNYTDEELNNPDFIRAELKRL GGEIPVDAGLGALQMALFEETAEAKLIEPTFIIDYPVEISPLARASDADPEITERFELYI AGRETANGFSELNDPDDQAARFRAQADKKSHGDDEAMYYDADYIRALEYGLPPTAGCGIG IDRFMMLLTDAPTIRDVLLFPHMRPENTK >gi|319804109|gb|ADMF01000031.1| GENE 122 116393 - 117301 536 302 aa, chain + ## HITS:1 COG:NMB2041 KEGG:ns NR:ns ## COG: NMB2041 COG0494 # Protein_GI_number: 15677864 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Neisseria meningitidis MC58 # 41 286 16 262 291 101 33.0 1e-21 MQGSFIPAFGSSSSRPFGSAHFKARREALTRVLTAGFVLPDASGSWSSAALCAHPGLIPI RLSSGVLIGRTAPEWADKISRMPGITQHQTGLRLDAAHLLDFGIAMRAAHLSQGWREELL DLFSLSESAQGAASVRLERALYRPLGALTRAVHLSARLRDPVDEFDPVYILGQRSRTKRV GPGLWDGLAAGMVGAGETPAEALLREAQEEASLLAADAQNARYLGSFLISRAVSGGWMLE ASYTHDLVLPAGFEPCAADHEVERFARFSAREVLDLIEARKVMHEAASSLLFSMAATPSA AD Prediction of potential genes in microbial genomes Time: Sun May 29 20:16:24 2011 Seq name: gi|319804031|gb|ADMF01000032.1| Sutterella wadsworthensis 3_1_45B cont1.32, whole genome shotgun sequence Length of sequence - 89125 bp Number of predicted genes - 76, with homology - 61 Number of transcription units - 52, operones - 19 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 436 349 ## Ppha_1041 transposase IS4 family protein 2 2 Tu 1 . - CDS 461 - 661 59 ## + Prom 575 - 634 2.4 3 3 Tu 1 . + CDS 660 - 1424 832 ## COG0730 Predicted permeases + Term 1462 - 1512 3.2 - Term 1333 - 1375 0.2 4 4 Tu 1 . - CDS 1432 - 1866 295 ## - Prom 1896 - 1955 2.4 + Prom 2702 - 2761 6.3 5 5 Tu 1 . + CDS 2869 - 3747 966 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 3822 - 3860 4.6 - Term 3763 - 3806 4.0 6 6 Tu 1 . - CDS 3864 - 4901 1539 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 5110 - 5169 1.9 7 7 Op 1 . + CDS 5240 - 5392 67 ## 8 7 Op 2 . + CDS 5367 - 6008 483 ## Psyr_0778 type III effector HopAG1 + Prom 6140 - 6199 2.7 9 8 Tu 1 . + CDS 6224 - 7615 1882 ## COG0137 Argininosuccinate synthase + Term 7738 - 7776 -0.4 + Prom 7628 - 7687 4.8 10 9 Tu 1 . + CDS 7835 - 8938 955 ## COG1230 Co/Zn/Cd efflux system component + Term 8967 - 9001 -0.9 + Prom 9118 - 9177 4.5 11 10 Op 1 3/0.133 + CDS 9222 - 10886 2080 ## COG0504 CTP synthase (UTP-ammonia lyase) 12 10 Op 2 3/0.133 + CDS 10975 - 11832 1083 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 13 10 Op 3 . + CDS 11965 - 13254 1940 ## COG0148 Enolase + Term 13350 - 13394 10.1 + Prom 13320 - 13379 3.4 14 11 Tu 1 . + CDS 13433 - 13867 358 ## COG2919 Septum formation initiator + Term 13887 - 13935 -0.4 - Term 13875 - 13918 9.1 15 12 Tu 1 . - CDS 13950 - 14855 1009 ## COG1281 Disulfide bond chaperones of the HSP33 family - Prom 14890 - 14949 3.9 16 13 Tu 1 . + CDS 14854 - 15852 934 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) + Term 16033 - 16064 -0.3 - Term 15875 - 15924 14.5 17 14 Tu 1 . - CDS 15947 - 17872 2177 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 17914 - 17973 4.7 18 15 Op 1 . + CDS 17994 - 19034 959 ## COG0583 Transcriptional regulator 19 15 Op 2 . + CDS 19037 - 19252 209 ## + Term 19375 - 19433 3.9 - Term 19331 - 19369 7.5 20 16 Tu 1 . - CDS 19427 - 20965 981 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 21 17 Tu 1 . + CDS 21219 - 21422 58 ## + Term 21475 - 21503 -1.0 - Term 21230 - 21269 2.1 22 18 Tu 1 . - CDS 21431 - 21985 519 ## - Term 22012 - 22049 5.1 23 19 Tu 1 . - CDS 22103 - 23086 1141 ## COG0039 Malate/lactate dehydrogenases - Prom 23143 - 23202 3.0 24 20 Tu 1 2/0.133 + CDS 23471 - 24124 945 ## COG0778 Nitroreductase + Term 24181 - 24216 2.0 25 21 Tu 1 . + CDS 24247 - 24906 731 ## COG0778 Nitroreductase + Term 24924 - 24963 7.1 + Prom 24958 - 25017 2.3 26 22 Op 1 . + CDS 25056 - 26006 663 ## 27 22 Op 2 . + CDS 26016 - 28217 1759 ## COG1199 Rad3-related DNA helicases 28 23 Op 1 . - CDS 28294 - 29784 1079 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 29 23 Op 2 . - CDS 29784 - 30254 316 ## 30 23 Op 3 5/0.133 - CDS 30288 - 31625 1813 ## COG0733 Na+-dependent transporters of the SNF family 31 24 Tu 1 5/0.133 - CDS 31728 - 33074 1519 ## COG0733 Na+-dependent transporters of the SNF family - Prom 33104 - 33163 3.2 - Term 33083 - 33136 7.2 32 25 Op 1 5/0.133 - CDS 33205 - 34524 1621 ## COG0733 Na+-dependent transporters of the SNF family - Prom 34610 - 34669 2.0 33 25 Op 2 . - CDS 34755 - 36110 1048 ## COG0733 Na+-dependent transporters of the SNF family - Prom 36243 - 36302 3.1 + Prom 36154 - 36213 1.6 34 26 Op 1 . + CDS 36322 - 37074 838 ## HCH_00529 periplasmic/secreted protein 35 26 Op 2 . + CDS 37100 - 37819 748 ## COG2013 Uncharacterized conserved protein + Term 37855 - 37895 -0.6 + Prom 37900 - 37959 3.4 36 27 Tu 1 . + CDS 37989 - 38636 793 ## COG0688 Phosphatidylserine decarboxylase + Term 38649 - 38682 1.6 - Term 38676 - 38714 4.1 37 28 Tu 1 . - CDS 38760 - 39989 869 ## Ajs_0810 hypothetical protein 38 29 Tu 1 . - CDS 40155 - 41021 1029 ## COG1183 Phosphatidylserine synthase - Prom 41120 - 41179 2.9 + Prom 41062 - 41121 2.0 39 30 Tu 1 . + CDS 41323 - 42072 817 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Term 42147 - 42194 5.1 - Term 42139 - 42178 9.1 40 31 Tu 1 . - CDS 42208 - 43245 1330 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 43292 - 43351 1.9 - Term 43620 - 43671 3.5 41 32 Op 1 . - CDS 43833 - 45128 895 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 42 32 Op 2 . - CDS 45206 - 46567 1040 ## COG2951 Membrane-bound lytic murein transglycosylase B - Prom 46597 - 46656 2.2 43 33 Op 1 . + CDS 46713 - 47810 756 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein 44 33 Op 2 . + CDS 47859 - 49187 1442 ## COG2270 Permeases of the major facilitator superfamily - Term 49334 - 49374 6.2 45 34 Tu 1 . - CDS 49396 - 50151 998 ## COG4105 DNA uptake lipoprotein - Prom 50210 - 50269 3.5 + Prom 49973 - 50032 1.6 46 35 Op 1 11/0.067 + CDS 50183 - 51274 1033 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 47 35 Op 2 . + CDS 51296 - 52108 679 ## COG1496 Uncharacterized conserved protein + Term 52170 - 52216 6.1 + Prom 52141 - 52200 3.7 48 36 Tu 1 . + CDS 52258 - 53604 563 ## PROTEIN SUPPORTED gi|229207303|ref|ZP_04333755.1| SSU ribosomal protein S12P methylthiotransferase + Term 53629 - 53666 4.3 49 37 Tu 1 . - CDS 53640 - 53792 61 ## + Prom 53634 - 53693 2.4 50 38 Op 1 . + CDS 53863 - 56124 2255 ## 51 38 Op 2 2/0.133 + CDS 56124 - 56933 645 ## COG0101 Pseudouridylate synthase + Term 56987 - 57032 -0.6 + Prom 56989 - 57048 4.1 52 39 Op 1 15/0.000 + CDS 57072 - 57944 910 ## COG0777 Acetyl-CoA carboxylase beta subunit + Term 57989 - 58048 6.3 + Prom 58096 - 58155 2.0 53 39 Op 2 . + CDS 58176 - 59519 1157 ## COG0285 Folylpolyglutamate synthase + Term 59651 - 59685 1.8 + Prom 59588 - 59647 2.2 54 40 Tu 1 . + CDS 59765 - 60151 406 ## BF4304 hypothetical protein + Prom 60217 - 60276 2.8 55 41 Tu 1 . + CDS 60303 - 61676 1105 ## + Term 61811 - 61842 -0.9 + Prom 61709 - 61768 5.9 56 42 Op 1 18/0.000 + CDS 61871 - 62374 624 ## COG1286 Uncharacterized membrane protein, required for colicin V production + Term 62413 - 62464 6.3 + Prom 62457 - 62516 4.5 57 42 Op 2 . + CDS 62551 - 64062 1770 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase + Term 64114 - 64162 13.2 - Term 64102 - 64150 12.4 58 43 Op 1 . - CDS 64159 - 64716 377 ## 59 43 Op 2 . - CDS 64713 - 64811 58 ## 60 43 Op 3 7/0.133 - CDS 64902 - 67490 2168 ## COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC 61 43 Op 4 . - CDS 67487 - 73291 4973 ## COG2373 Large extracellular alpha-helical protein + Prom 73530 - 73589 3.8 62 44 Op 1 8/0.067 + CDS 73800 - 75572 601 ## COG0642 Signal transduction histidine kinase 63 44 Op 2 . + CDS 75569 - 76201 409 ## COG4566 Response regulator 64 45 Op 1 . + CDS 76355 - 78187 1552 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 78213 - 78254 5.7 65 45 Op 2 . + CDS 78263 - 78613 207 ## Glov_1004 hypothetical protein + Prom 78776 - 78835 6.1 66 46 Tu 1 . + CDS 78876 - 79067 145 ## + Prom 79101 - 79160 2.3 67 47 Tu 1 . + CDS 79240 - 80592 1410 ## COG0015 Adenylosuccinate lyase 68 48 Op 1 . + CDS 80777 - 82183 1243 ## COG0471 Di- and tricarboxylate transporters + Term 82208 - 82261 7.4 69 48 Op 2 . + CDS 82280 - 83044 526 ## COG2188 Transcriptional regulators + Term 83139 - 83179 2.0 - Term 83106 - 83131 -0.8 70 49 Op 1 . - CDS 83152 - 84321 1060 ## 71 49 Op 2 3/0.133 - CDS 84321 - 85196 801 ## COG0313 Predicted methyltransferases 72 49 Op 3 . - CDS 85262 - 85849 504 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Prom 85872 - 85931 2.4 73 50 Tu 1 . + CDS 86019 - 86522 592 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein + Term 86546 - 86590 11.0 - Term 86534 - 86578 -0.2 74 51 Op 1 . - CDS 86600 - 87226 268 ## COG4566 Response regulator 75 51 Op 2 . - CDS 87210 - 88199 596 ## COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - Prom 88371 - 88430 2.5 76 52 Tu 1 . - CDS 88677 - 89123 354 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319804031|gb|ADMF01000032.1| GENE 1 2 - 436 349 144 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 9 137 438 564 570 102 39.0 5e-21 NLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYRFVL QSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRNRVA QYRWSTETTARDQMFLELFFGESD >gi|319804031|gb|ADMF01000032.1| GENE 2 461 - 661 59 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAADSQYLERFDHNHSQTPLHTRLDLLHPHQLKSVECLFVRASFHRRIFKKTIFAARSSG HDLCRN >gi|319804031|gb|ADMF01000032.1| GENE 3 660 - 1424 832 254 aa, chain + ## HITS:1 COG:FN1706 KEGG:ns NR:ns ## COG: FN1706 COG0730 # Protein_GI_number: 19705027 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Fusobacterium nucleatum # 1 253 1 253 254 148 35.0 1e-35 MELDLITFLIVCPLVFLGGLVDAVAGGGGLIALPAYLIAGVPAHLALGTNKLSSAMGTVV SAFRLWRAGFLNIRKSLPAIVCSLLGSAAGAHLALLVPERVFELILVGLLPIAAFFVLSK RAVMSNDEGIITARKQLVILCIASLICGAYDGFYGPGAGTFMLLAFTLWAKMGVRSASGT MKAVNLASNIAAFATFALSGEVIWLLGLTAGIFGIAGHYIGAGLVLQNGTKIVRPIIGAV LAVLFVKTAWELLS >gi|319804031|gb|ADMF01000032.1| GENE 4 1432 - 1866 295 144 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPKLKFADDLPQPASVNAPLQCQICFESPAETAAEATPEEPSLFAECDDTNERDQQAAPQ QQAHCPPAKTALSDHGRQRYSLEKKREALELFNRDYGYKRASIVLGVPAYTVRDWNRLYK ENRFLQSGSTLDTKSLWEETADEG >gi|319804031|gb|ADMF01000032.1| GENE 5 2869 - 3747 966 292 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 6 292 3 290 290 298 48.0 6e-81 MTPARKSTRRIAAVHDLSGVGRVSLMVVIPILSTMGFDVCPLPTVILSNHTQYPEYSFLD LTDEMPKMIAGWKKLEIEFDAIYTDYLGSPRQIQIVSGFIDDFRREDTLIVVDPVLGDNG RLYAGMTKEMVIEMRVLARRADVLTPNLTELFALLDRPYQHECSDELLKEALKALSAQGP DTVIITGVPVVGRPDLTSVVASSRSDGRAWKVTCPYLPAHYPGTGDAFTSVVTGALLQGD SLPVALDRAAQFILQGIRATFGYQGDNREGILLERVLPNLNLPIQSSTYELL >gi|319804031|gb|ADMF01000032.1| GENE 6 3864 - 4901 1539 345 aa, chain - ## HITS:1 COG:ECs3833 KEGG:ns NR:ns ## COG: ECs3833 COG0252 # Protein_GI_number: 15833087 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 2 345 4 348 348 369 60.0 1e-102 MFKQTLLALSLAAASTAALALPNIAVLATGGTIAGAGASSTGSAYKAGAVSVNHLVDAVP QLAKIANVTPIQVTNIGSQDMSDEVWLKLAKTLASDCGKYDGFVITHGTDTMEETAYFLQ LTTACKKPVVLVGAMLPSTGLSADGPRNLYNAVLTAATPDTAKQGVVVAMDNVVIGARDV FKSNTTQPETFQAMNFGKVGWIFNDKVTYEAVGLRAQLKAPFDVTKLDQLPKVGIVYNHA GVEGYQAEALVKAGYKGIVSAGVGNGNIHKAVWPVLEKAAQDGVVVVRASRVPTGSATKD AEVDDEKMHWVAAQSLNPQKARVLLQLSLTKTADWKEVQQYFDKY >gi|319804031|gb|ADMF01000032.1| GENE 7 5240 - 5392 67 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCKYIQTCTIKYFIFRAAKTTARHPSPQLGRLLGSGLNEKNNDDDFSSSA >gi|319804031|gb|ADMF01000032.1| GENE 8 5367 - 6008 483 213 aa, chain + ## HITS:1 COG:no KEGG:Psyr_0778 NR:ns ## KEGG: Psyr_0778 # Name: not_defined # Def: type III effector HopAG1 # Organism: P.syringae_B728a # Pathway: not_defined # 5 202 505 703 716 115 36.0 7e-25 MTIFHPQLDENGEPVAVSRPTRSSHVSAWGDSGAAATFSITDPTLLPAVLNGIALTHAPF ECLDWVRFAHELPAVAEPPFPATDKRRTSGLVIIEPDQRIWLVHPTNQFGGVEATFPKGR LEPGLTLAANAVKEGWEESGLDARPLEWLCDIERTKTITRYYLAFRAAGTPADMGWESQA VSLVPADQLAAFLNRPNDRKVLPALQTALKRLF >gi|319804031|gb|ADMF01000032.1| GENE 9 6224 - 7615 1882 463 aa, chain + ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 20 450 2 433 447 720 80.0 0 MCPSRIRVEYEQISLRVKKNMSQTILQSVPVGEKVGIAFSGGLDTSCALRWMKTKGALPY AYTANLAQPDETDYEAIPRRAMEYGAEKARLIDCRAQLVNEGIAAIQSGAFHISTGGQLY FNTTPLGRAVTGTMLVAAMREDGVNIWGDGSTYKGNDIERFYRYGLLANPSLKIYKPWLD VTFIKELGGRAEMSAFLQKEGFNYRMSAEKAYSTDSNMLGATHEAKDLEHLDSNVKIVDP IMGVAFWRDDVKIEPELVKVSFKDGVPVAINDKTFSDPVALMMEANRIGGRHGLGMSDQI ENRIIEAKSRGIYEAPGMALLFICYERLVTGIHNEDTIEQYRINGIKLGRYLYQGRWFDS QAIMLRESAMRWVASAITGEVTLELRRGNDYSIMNTVSPNLTYEPERLTMEKGDSMFSAE DRIGQLTMRNLDIVDTRQKLGIYSKEGLLAGTDMTPLLGKNAN >gi|319804031|gb|ADMF01000032.1| GENE 10 7835 - 8938 955 367 aa, chain + ## HITS:1 COG:lin2720 KEGG:ns NR:ns ## COG: lin2720 COG1230 # Protein_GI_number: 16801781 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Listeria innocua # 58 325 24 293 303 217 40.0 3e-56 MTKIETQTPATAGIQNEAILEADTNNPTALESPSEFFSHGEGDSPRSHAAEKTRLSVLGF AVLLTLSFSVIELVGGWWANSLALIGDAGHMVTDSMSLLFALVANRLAMKGADEAHSFGH GRVEVIAAFVNGLTLLGVTFWLFYEAIERIREPAAVAGGSVMVIAFAGLLINVAVAWSLS RDRQNVNTRAALLHVLGDLLGSVAAIAAGGIIWAGGPAIVDPLLSMFVGLLLLRATWKVL SESVRILLDGTPEQTNFDAVGEYIRSVPGVDEVHDLHIWTITPGHDALQCHVRIASYQCW PRILHAVREGIKGRFNIDHVTVQPEWEGMGPCWNCEGTERVIRRADCSNCSGCRHAAPAP QPAALRA >gi|319804031|gb|ADMF01000032.1| GENE 11 9222 - 10886 2080 554 aa, chain + ## HITS:1 COG:RSc1126 KEGG:ns NR:ns ## COG: RSc1126 COG0504 # Protein_GI_number: 17545845 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Ralstonia solanacearum # 1 554 1 554 554 795 71.0 0 MTKYVFVTGGVVSSLGKGIAAASLAAILESRGLKVTMIKLDPYINVDPGTMSPFQHGEVF VTEDGAETDLDLGHYERFISSKMHKPNNFTSGQIYESVLKKERRGEYLGKTVQVIPHITN EIQEFIARGAASAHGGKPDVCVVEIGGTVGDIESLPFVEAVRQMSFRVGRNNTCFIHLTL CPWIKSAGELKTKPTQHSVQKLREEGVYPDVLLCRAECMIPENERAKISLFSNVPMENVI SVADASTIYEVPLMLHAQHLDEIVCKKLGLETKPADLSAWADIVHKLKNPIHNVTIGMVG KYVDYADSYKSLNEALTHAGIHTSTKVSIRFIDSTKIEENGTDCLKGLDGILVPGGFGKR GTEGMIQAIEYARVNMIPFLGICLGMQCAVIEFARHVCGLGGANSTELDPGTPHPVVALL TEWKDHSGAVQRRDESSDLGGTMRLGRQEVPVAPNTLAHKIYGDVVAERHRHRYEVNNSY VPQFEEKGMVISAKTPLEHLPEMMELHNHPFFFAVQFHPEFTSNPRFGHPLFKAYIEAAV KHREAAEEAEKAEA >gi|319804031|gb|ADMF01000032.1| GENE 12 10975 - 11832 1083 285 aa, chain + ## HITS:1 COG:RSc1127 KEGG:ns NR:ns ## COG: RSc1127 COG2877 # Protein_GI_number: 17545846 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Ralstonia solanacearum # 1 283 1 283 284 400 74.0 1e-111 MQLCGYEVGNRRPFFLIAGPCVIESEAMALDIAHQMKEITAELGIPYIFKASYDKANRTS GKSFRGLGMEKGLEILAKVRAEVGVPVLTDVHTEAEVPAVAAVVDVLQTPAFLCRQTDFI RACAQSGKPVNIKKGQFLAPGDMANVIAKARAAAQEAGLDPDRFMCCERGASFGYGNLVS DMRGLAIMRATGAPVVMDATHSVQLPGGNGTSSGGQRQFVPVLARAACAVGVAGFFMETH PNPAEALSDGPNAVPLNRMKELLAELVEIDRLVKAHPYLEESFAS >gi|319804031|gb|ADMF01000032.1| GENE 13 11965 - 13254 1940 429 aa, chain + ## HITS:1 COG:RSc1129 KEGG:ns NR:ns ## COG: RSc1129 COG0148 # Protein_GI_number: 17545848 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Ralstonia solanacearum # 1 428 1 427 427 573 69.0 1e-163 MSAIIDVIGREILDSRGNPTVEAEVWLESGVVATAAVPSGASTGVREAIELRDKDPARFG GKGVLKAVENVSGEIANAVLGAEASDQVYIDRLMIDLDGTENKSRLGANAMLAVSMAVAR AAAQETGLPLYRYFGGMGAVTLPVPMMNVINGGAHANNNLDLQEFMIVPVGAPTFREALR CGAETFQALKKLVNARGLSTAVGDEGGFAPVIESHEEALDLILDAIAAAGYEPGRDVCLA LDCASSEFFDNGRYVMKKSTGDSLTAEDWIGVLADWCGRYPIVSIEDGMAEGDWEGWAKL TAALGDRIQLVGDDLFVTNPKILKEGIERGIANSILVKVNQIGTLSETFEAVNMAKCAAY TAVISHRSGETEDSTIADIAVGLNAGQIKTGSMSRSDRMAKYNQLLRIEEHLAGAAVYPG RTAFKALRG >gi|319804031|gb|ADMF01000032.1| GENE 14 13433 - 13867 358 144 aa, chain + ## HITS:1 COG:PA3634 KEGG:ns NR:ns ## COG: PA3634 COG2919 # Protein_GI_number: 15598830 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Pseudomonas aeruginosa # 4 88 9 92 94 60 38.0 1e-09 MVRLFICILLLGIGAAQYQLWLGRASWSRLSELRVILNTQREENESLRRTNEALQAEFNS LANNQDAIEERARRELNMVKPNEILFRIETTEEVARKSDAAASMPDVDAPDIAAGAKPTF TPKKSDLYSAPKNQRAPKARDRRQ >gi|319804031|gb|ADMF01000032.1| GENE 15 13950 - 14855 1009 301 aa, chain - ## HITS:1 COG:RSc1132 KEGG:ns NR:ns ## COG: RSc1132 COG1281 # Protein_GI_number: 17545851 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Ralstonia solanacearum # 2 299 3 328 338 174 33.0 3e-43 MDALQKLLFPRANVRGETVVLGDALEQAVVNQNLPVAARRLAGEMAAAALLTAGALQFDG TVALQIEGDGPVRRALAEVRPGYAFRVMVELAAGTDPAKLDPNAKLKDLVNVSGRGRCAF ILDRAHRPADEAPYQGVVALEGDTLAQALENYFRHSEQVDTKLVLASDDKTAGGVFLQKM PAEGGKLPADYDPEGWQRLTMFAGTVKSAELLTLSPEDINRRLFWEESPLVTHEAAPHFA CTCSKARFDDLVRSLGREEVEAIIREKGALDVACRFCGAKAHYDAIDAAALFTPGVQTQK A >gi|319804031|gb|ADMF01000032.1| GENE 16 14854 - 15852 934 332 aa, chain + ## HITS:1 COG:RSc1140 KEGG:ns NR:ns ## COG: RSc1140 COG0613 # Protein_GI_number: 17545859 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Ralstonia solanacearum # 26 322 2 284 286 226 40.0 5e-59 MTMTKPINEKPEVQYFSGAAKSINFLDRNASASIEAKRVQSFKSFVVTIDLHMHSNASDG ILPPAEVVRLCAGNGVKLMSLTDHDTMKGIEEARAEAERLGIAFVPGIEISTRWGQKSIH VAAYNLNPNTEAFKAFFKGVDKKRIERGERMGKLLAACGCKGAFEGAMALAVHPGSLSRT HFAQWLLDAGYVDNYAQAFDKYLKPGKPGYVQIEWPEIRDAVRFVKSEGGTASLAHPGRY NLKEGWMIDELLTAFQGAGGEAIEVASGSQTRDDDALFAAKAKQYGFLASTGSDWHSPRS PRPTPGSQPQVPADLTPIWTKFGFPKDFCGQH >gi|319804031|gb|ADMF01000032.1| GENE 17 15947 - 17872 2177 641 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 94 633 1 473 484 220 32.0 8e-57 MIHPSEPVLSAAAAAVLLTFAAASAAAMTPGVYSAAVPARNGELAVEVQVSADRIESVKV VRQQETPGIGSLAVEALPAAIVAQQTSSVDVVSGATMTSNAIIKAVSEALKQAGADASFF KKKTEAKSSDKALPLETQADVIIVGGGGAGMVAAATAVERGAKVIVLEKMAMLGGNTARS EGNMSAMDPNPEKLLDMTQAVRDIVTKYTSMKPCNKAVSDLQETVKKQLAAHDAAGKKYI FDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQSDMTWFHVPRHWIDVGIGG LYPRGQWPRQADGKTPISTYDAYIAPLAKKVKAAGSTIYTSMKVTEIERDPSGRVTGVKA VDVKGAPHIFSGKNVILAAGGYGANLQMVKKYNNISVIATSNQPGTTGEVLEAAVKAGAA LEGMQWIQIHPHGNPKNGELESAIAGRPQDTPYVNKLGLRFVDETGRRDEISHGILEQPG QVVYSIFDQETINQKKVRDDLMQIALSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNA AAAAQDTKGLSVPKILIGMPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPG LYAAGEITGGIHGGNRLGRNALTDLLVFGHIAGLEVTAHQN >gi|319804031|gb|ADMF01000032.1| GENE 18 17994 - 19034 959 346 aa, chain + ## HITS:1 COG:PA2551 KEGG:ns NR:ns ## COG: PA2551 COG0583 # Protein_GI_number: 15597747 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 38 342 6 302 310 93 26.0 7e-19 MSEPVLSRKRQGAQDAVDTLEAFEAFDKHGLPAFVRGVDAEALYFFLALFRTGTLPRAAE QLGISLSSANRMLAKLRTYWDDPLFVRSGFLMQPTTAAKRRYDKVLSLMHVLEDLRRDDE LDPRTLSRTVRTACYDNAFALCIASIFADFTARMPHVRPRATQADEHLFDYLREDLLDLV FFARQGLHPDIHSAALLTTPYVCLVRRGHPLSERAAAFGPLEREDLEAFPQVLINAQPDR YRAPNSPGNGWFNPKNPDRIALVTPFFLAASLCLEETDCYAIVPKATAELALDPRRTAML TLSDAAPKLTVRLGWHERTHADPGSQLIRAQLLALIQKRFGRPAGE >gi|319804031|gb|ADMF01000032.1| GENE 19 19037 - 19252 209 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLHSLWILAATFFTVLTYVFVKWVPPQYEIWDIFFVRSCYMAFFAVLMAAVAKTPLKILT RNSSLSPPSAS >gi|319804031|gb|ADMF01000032.1| GENE 20 19427 - 20965 981 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 9 446 6 440 456 382 46 1e-105 MEMDDFTQLVQSVNGLLWGMYCLIPLLVGTGIYLTIKLRFIQIRRFGQAFRKVFGGITLF GDKAGKDGMSSFQSLATAISAQVGTGNLAGVATAIAMGGPGAIFWMWLAAFFGMATIFAE ATLAQVFRARDAHGQIMGGPAFYISRGLNNKPLAAFFAVSIIIALGFIGNMVQANSIADG FHKAFEIPQWATGIFVFAIAGFIFIGGVRRIASFAEKMVPLMAVVYILGSLTIIFSNYDM ILPAFKEIIVGAFDPSAATGGIIGASLKEAIRYGVARGLFSNEAGMGSTPHAHALAQVKH PCEQGLVAYVGLFFDTFIVLNMTALVILTTGVLDGKSTGIVLTQAAFTAGLGDIGPGFVA ICLFFFAFTTIVGWYFFGEQNVKYLLGLRWVQSYRVLVLCFLMLGSFLHVTLVWELADFF NGIMVIPNVIALLALSGLVAKVLKDYDTKFMLGETPEYGALSPSGGEPFSLEPSPRKGRR FSRLKLRLRRKKTPPVNLDEMDQLKERGLDRF >gi|319804031|gb|ADMF01000032.1| GENE 21 21219 - 21422 58 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPRKAKNRQFESALPSCSQTCMMRFSPQILADLMAARIIRILIWLCLAACAFWIINAVVS MIWYVFR >gi|319804031|gb|ADMF01000032.1| GENE 22 21431 - 21985 519 184 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFPPELYAAVKRIEASAAPLLRSSAERIVILDTHVVLECTLWRDESESDSPLGCALKAGR IVPAASHETLLELAGVAARPVKQMLEAEAAARALTMLERWGKLIRMPSKDMLTEAAQALD SENVRCRDPEDQKFLILTKAAANICGVGSTALITRDKLLRKAAKKLRAAERGGAMLLLPE DFTE >gi|319804031|gb|ADMF01000032.1| GENE 23 22103 - 23086 1141 327 aa, chain - ## HITS:1 COG:XF1211 KEGG:ns NR:ns ## COG: XF1211 COG0039 # Protein_GI_number: 15837813 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Xylella fastidiosa 9a5c # 1 326 8 334 335 385 61.0 1e-107 MKKPIRVAVTGPAGNIGYSLLFRIAAGDMFGPDQPVILQLLDRASPESQQKVTGVMMELD DCAFPLLAGLENSPEATTAFRDADVALLVGARPRSKGMERADLLNANAEIFVAQGRALNE AASRDCKVLVVGNPCNTNAWIAMKSAPDLKPENFTSMLRLDQNRLMAQTATQAKVSVNDI THAAVWGNHSPAMFPDLDHALIKGRPALELVDRSYYQETMTPIVAKRGSAIIEARGASSA ASAASAAIDHIRDWVLGSGDRWVTMGVPSDGSYGIPEGLLFGFPCTTKDGRWEIVQGLEL SDFARATIAKSVAELESERAHVAALLG >gi|319804031|gb|ADMF01000032.1| GENE 24 23471 - 24124 945 217 aa, chain + ## HITS:1 COG:VCA0637 KEGG:ns NR:ns ## COG: VCA0637 COG0778 # Protein_GI_number: 15601395 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Vibrio cholerae # 7 216 4 217 217 144 36.0 1e-34 MQNNVFLRLAQERYTTKHYNGQQIPREEFDTLLEILRLTPTSVNAQALHYFTATSQEARE RLLPAFPEFNRDRITGASDVVVFTVPKTLTEAHLRRVLDKEESDGRFPNAEVKNAQDQGR RYFAGLHQGSEAELVAWEARQAYIGMGFLLFAAAGMGIDSTALEGVDFPKLNEILGLDEK NLTAIAAVSLGYRSPKDGNAQRPKSRLTRDELFTSLD >gi|319804031|gb|ADMF01000032.1| GENE 25 24247 - 24906 731 219 aa, chain + ## HITS:1 COG:VCA0637 KEGG:ns NR:ns ## COG: VCA0637 COG0778 # Protein_GI_number: 15601395 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Vibrio cholerae # 3 219 2 217 217 136 35.0 3e-32 MNSMLELVKHRYTAKRYDANKPISDETLNDLLEVLRLSPSSVNIQPWHFYALKTKEALHA IRPAVKDFNLERTEHAPVIIVFAIEKHLDDAYVHRLMAQETADGRFRGQFADPEFAAKLE AFRCASVKAYCSGADRGECWAANQCHIALGFLLLAAAGMGVDATTLGGMHFEKVDEILGL AAKGQKSVMACALGYRSSDDWNADAPKSRFPLDAVATIL >gi|319804031|gb|ADMF01000032.1| GENE 26 25056 - 26006 663 316 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRYALQSLCSSRSLISVFCALYAWTAGGALAASAPEDEAVLEARAAQAEKVLADRSFYE RWKEPSAIDSVKTAAQVKSDAEGVLKQIEEALAVQRSWCGKKFFVNSCIDDARRASFDRE REVREIIVAADEIIRLDRVEKMRAEQEKNALEPRREPMKIAPKTVKTDPPEPMHITPKSV KAPSQPIDIAPKTVKEPSAPMEWEKKTVKDASVPHGMNGKTVKDAAAPTPIPGSEMPHDA ASERAAAEAANEAYYAQKQLEAQKRMEEAAELAAKRKADREAKQQQFERSLDEREAAQKR YEANQKERKSNLMQYF >gi|319804031|gb|ADMF01000032.1| GENE 27 26016 - 28217 1759 733 aa, chain + ## HITS:1 COG:RSc1626 KEGG:ns NR:ns ## COG: RSc1626 COG1199 # Protein_GI_number: 17546345 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Ralstonia solanacearum # 25 722 36 693 713 540 44.0 1e-153 MTSPSQKNQWAELFDAARPLEERTALAFAADGPLARRQTNFTPREGQLAFAQAVAEAIQN KETLLAEAGTGTGKSFAYLVPALLSGSTVVISTAGKPLQDQLFNKDIPALSAALGVNVPT AVLKGRSNYVCPYRLERTESEGLLPERDSYRKLREIKRFAAISATGDRAELPTVPEDDPL WPLVTSTRENCLGKERCEHWENCFVRAAREKALKSQIVVVNHHLFLSSLALKREANGQID GMMPAADLTVIDEAHQLPGIATDFFGTTFTTWQLESIADEARALGRGHANDGADWDALCH AVQKTARDLVIAARGIGIEPGDRLAVKTIERFEELTEPFGKMLAAFGQLIRAMRANKDRS DDLDALCEYACEVDLEMAKWETLFKRFAHSEGKAEDASEEAADIPLEGFKGFEDTLVSTY SQGDAGAAQGGTQRDFRFQKDAVQWISAAPSSLRFNNTPLKFADEFRQMREAEGGAWVFT SATLSTAGDFTHFAIETGIPEAKAGTWESPFNYWEQGCFYLPQLPPPTNTIEHAGRVVDA AWPLVCAAKGRTFFLCTSLAAVSKAAEELRALLDHAGNPYPLFVQGDMPKAALIDAFREH GNAILVGSMSFWEGVDVQGEALSLVVIDKLPFAPPDDPVYAARSDALREQGKSPFALMAL PEAVTALKQGSGRLIRSETDRGVFMLCDSRVADKAYGRTILKSLPDFFRTRSLEKALEFF RSPQAWHKTIYRQ >gi|319804031|gb|ADMF01000032.1| GENE 28 28294 - 29784 1079 496 aa, chain - ## HITS:1 COG:BS_yefA KEGG:ns NR:ns ## COG: BS_yefA COG2265 # Protein_GI_number: 16077741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus subtilis # 19 490 14 450 459 166 28.0 9e-41 MGRRHAPGAAAERPEVLTDVLITGIHPSGAGIARLSDSSNSRDVPEILVPGALPGARGDL FWNPPKPGGHWGLAVEWRESAPSPDADPSRCPHAASLNGQPVCGGCPLGSLKYSAELALK TKLLIEEPLRQAGLWREGLIEPPSGQPKAFAQHFRNKAVLYPSVIDGIGRFGYYAARSQI LVPAEDCPQTPVWMGEAARALAPFLCEPALTPAPEAAVSNGTGVLRCLLLREAPGSGERM AVLVVRALTADLLAAKEKLIAALAPCKLQSLLVNVHPTPGSAVLSFAPDALVVWAGRSSI EAELMDLAFTVGPQTFLQVNTPQTLVLYEKALDAADVQSGDQILDLYCGVGTITLAAARR AGPHGRALGVERVEASIVCASENAARNSIPQAAFVAEPTETFLSAALKEGFPDGFKPTKI IVDPAYQGMAGGAAKALADLFSLPNGPKRLAYVSCNPKSFARDAKELAVAGLTLESISPV DLFPGAMHLELVAAFS >gi|319804031|gb|ADMF01000032.1| GENE 29 29784 - 30254 316 156 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTSHPTPSSQTSAAAEPPAADAAPEPKQTVPDASDAVRELLSREWTAHKPLWLGALALM AAVAVVGAWLQGADPYWAGALYNLCTVVLLAALFGFAALGLVWRTVKRMSERLHFEARGK FQLEASRALFRRSGVLVGIVIAAEVVMYMLRLWAAR >gi|319804031|gb|ADMF01000032.1| GENE 30 30288 - 31625 1813 445 aa, chain - ## HITS:1 COG:NMA1961 KEGG:ns NR:ns ## COG: NMA1961 COG0733 # Protein_GI_number: 15794844 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 1 401 1 398 445 295 45.0 1e-79 MSTHTPATWGTRLGFILASAGSAVGLGAIWKFPYMAGTNGGSVFMLPYIFFTLTVGVALL LAEFAMGRAGRRGAVGSLNRAAGKPWGIFGGIGVFTVFLILSFYSVVGGWCIKYLWDAML GIGLTTDAKVLNANFGSFVSDMVSSYGYLLLFLCLTAYVVMNGVQQGIEKVAKILMPLLF ILMVILIIRGVTLPGGWAGVEFLFTPRWEDFNGTALFNAMGFCFFSLSLGAGTMITYGSY LNPKADLPSSVGWVAFLAILSSILGGLMVMPAVFAFHLDPTAGPGLTFVTMPAVFSQMPL GQGFAAAFYACLTVAALTSSVSMLEACTALLTQEANISRKNAILLTLAGCAIVGFAANMS FGPWGDVKLFGKNIFDILDYVTSNVGMPLSTFGIAIAAAWVAWPVTSRELQSVKPLSDTS LKAARLLIGVLAPVFVAIVALGGIL >gi|319804031|gb|ADMF01000032.1| GENE 31 31728 - 33074 1519 448 aa, chain - ## HITS:1 COG:BS_yhdH KEGG:ns NR:ns ## COG: BS_yhdH COG0733 # Protein_GI_number: 16078012 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Bacillus subtilis # 10 397 9 397 451 269 42.0 7e-72 MPQTSSRSAWTSRLGFILASAGSAVGLGAIWKFPYMAGTNGGSIFMLPTIAFSLTIGLAL LIAEMSMGRAARGGAGTAYLKLGGRAWSVIGFISVATGALVLAFYSVVGGWCTHYFIESI MGRGITDDPTAMRSAFEAFAADPVQSVMGHVIFLTTTAGVVLCGVERGIERVGKILMPLL FILMLILIVRGLMLPGAIEGVKFLFMPDPEAFTGEALLNAMGFAFFSLSVGSGSMMNYGS YLSDKVNVGTSTAWIVVLAVMSSILGGLMIMPAVFAFGLTPDAGPGLTFATMPAVFSHLP MGGLFAVAFYGCLFVAALTSAISILEMVSQHCVDRWGFSRRTAVLTVSTVLGIIGVFCAL SFGPLSDWKLFGRTLFDLLDYATSNIGMPIGCVGIGLVAAWVAWPTIRKQLEMNAKWSAA GLKAFRILAGCAAPILILIVAAKGAGLF >gi|319804031|gb|ADMF01000032.1| GENE 32 33205 - 34524 1621 439 aa, chain - ## HITS:1 COG:NMA1961 KEGG:ns NR:ns ## COG: NMA1961 COG0733 # Protein_GI_number: 15794844 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis Z2491 # 7 438 6 442 445 278 39.0 1e-74 MAQERITWTSRIGFVLASAGAAVGLGAIWKFPYMAGTNGGSVFVLPFILLTFTVGLALLI AEVVLGRLGRGGIVTTYRRLAGPAFLPAGYLGVLTGFLVLSFYSAIGGWTLSYFCEALVG QGLITDQSQLGAHFGEFTANPVLALGFQWLFLLLNGLIVAFDVTKGIERVSKILMPLLFF MMLAIIIRGLMLPGAWAGVEFLFKFDPQAFTFSALLQAMGFTFFSLCVGCGCMMTYGSYL DDKTNVLRSCSWIAFLSVIASIMGGLMIMPSVFAFGLDPTAGPGLTFITMPAVFAQMPMG QLFAVMFYLCLAVAAITSSVSMIEILVSYLVDEQKMSRPKAAVLSTIALAVVGILPCLSF GLLSDVKMFNGRTFFDVFDFFTSNLSLPLGGLVILYLAGYTCWDRVKNTAPEKWQWLLKL MLRVFSPILVLVVLISGLI >gi|319804031|gb|ADMF01000032.1| GENE 33 34755 - 36110 1048 451 aa, chain - ## HITS:1 COG:NMB1707 KEGG:ns NR:ns ## COG: NMB1707 COG0733 # Protein_GI_number: 15677555 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis MC58 # 5 442 2 435 445 263 37.0 7e-70 MSVPTSSAQWSSRLGFILAAAGSAIGLGAIWKFPYWAGANGGAAFILPYILFTFTAGVVL VMAELALGRSGRGSAVEAMRRAGGRGFAWCGGMAVLTSFLILSYYAVVGGWCAAYLAEAL MGEAASPDPEVLKMRFGELVSSGGRNIAWLFAFLAAVCLTAVFGVHRGIERLSTCLMPIF FLLMIGLAAYSLLLPGSEAGLAYLFQFSWSTVTPQAILNAMGFTFFSLSLGAGVLVTYGA YVNKSTRLPSAAMWVAILALQAAILAGLVIMPAVFAYGLEPDAGPGLVFITLPMIFAQLS GGSVVAVIFYFCLFVAALTSAVSLLEVAVAFLQNECRFSRRAAVFLCFAALFILGSVSAL SFGPWNDCLIFGRSIFDFLDYVCTNFLMTINGLAVAFVVGWKAWPKAMKELSTCSPENGV VTKGTLSAIGFGLRWLAPLMVLASCWQGLEA >gi|319804031|gb|ADMF01000032.1| GENE 34 36322 - 37074 838 250 aa, chain + ## HITS:1 COG:no KEGG:HCH_00529 NR:ns ## KEGG: HCH_00529 # Name: not_defined # Def: periplasmic/secreted protein # Organism: H.chejuensis # Pathway: not_defined # 37 243 27 220 227 66 30.0 8e-10 MQKQWMKVSCAAAAALTLAAPLSGYAMPRVADAGLVMTVTGEANRLLANDQAVITFTAEA QRPQAQDASDEIIKAGNAAIAALNAINAPAGQVEVQTADFSTWPVRTRAKEGETSEIAAW GARQTLRVTVRDLKLASAVMSAAGKSMNYDGVTFSVSRAVREAAQDELLAEAVKRATERA VTAAQALGLEEKNVRIEGIQVSGAAGPSPRYYAQPMMMRAAAANDSAEAVVSAGSADTAL TVSLTVRITP >gi|319804031|gb|ADMF01000032.1| GENE 35 37100 - 37819 748 239 aa, chain + ## HITS:1 COG:AF0626 KEGG:ns NR:ns ## COG: AF0626 COG2013 # Protein_GI_number: 11498234 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Archaeoglobus fulgidus # 13 232 13 218 218 115 36.0 1e-25 MAKFTAQAGIDPLLRVDLDPGDEVAAERGSMVMMDAGLVLKGKTRGGFFKSLARKFLNDE TFFQQWIAAEDQAGTAYLAPSLPGGVKVLDVKDDGVMIADGCFLAATAGIDISAKAQGLG RAILSDSGGFFIMKAEGTGTLAVSGFGSLEEVEVTPDRPLLIDNGHLVAWDVSLDYEITL QTGRSGLAGRLIGSQLTGEGFVLKFSGSGRVILSSRSQGSFIDWIFSRRPIDREKEKTE >gi|319804031|gb|ADMF01000032.1| GENE 36 37989 - 38636 793 215 aa, chain + ## HITS:1 COG:NMB0963 KEGG:ns NR:ns ## COG: NMB0963 COG0688 # Protein_GI_number: 15676856 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Neisseria meningitidis MC58 # 3 215 2 213 265 277 65.0 8e-75 MSNRIYPHPIIAREGWPILAGALIAVIVSWMLDLGIITFLFFVFLVFAFQFFRDPAREAP EDPRAVVSPVDGRVCKVEKCTNPETGEDAVKVSIFMNVFNVHSQKSPVAGVVEKVTYTPG LFVNADLDKASTENERNAVTVRMADGRRITFIQVAGLVARRIICYATIGQELARGERYGF IRFGSRVDVYLPADAEIVAQIGDKMTGVSSTIARL >gi|319804031|gb|ADMF01000032.1| GENE 37 38760 - 39989 869 409 aa, chain - ## HITS:1 COG:no KEGG:Ajs_0810 NR:ns ## KEGG: Ajs_0810 # Name: not_defined # Def: hypothetical protein # Organism: Acidovorax_JS42 # Pathway: not_defined # 11 329 8 328 329 163 33.0 1e-38 MNEDTASSTMFEDVVTMIRILSLIPQDRWTTVAEIHQELEDRGVEIHRRTLQRYLKTIRD HSDVFPIHVETSGKPYGFCWDPQSAGFHLPQLGVEQMLLLRIAEERLQSHLPPQAITPIR PLLRSARRVIKYDDETEGTWLRKVKVLEDAQSFQPPVIRPGVLSAIADALFIDHKVLLRC RSARCRNTEVIVRPLAIIQKGVRTYLVYQTDAGDFQHIALNRLDAAELMQDAFERPENFD LEDYSAKIRLNDARGKTMRLSITSDDPEFVRILSESPFNQTQKIEDEPGKTGSWVITAVV EDSLLLDGWLAEHRGSIISSTKTALRQEEATAMLLTPQTENNAEKRSSRPRAARTPSGEE INLTAPAQKSYEVAAAALNSGAEFGLEVPADLKSPKAEFNIKDHEATAK >gi|319804031|gb|ADMF01000032.1| GENE 38 40155 - 41021 1029 288 aa, chain - ## HITS:1 COG:RSc2073 KEGG:ns NR:ns ## COG: RSc2073 COG1183 # Protein_GI_number: 17546792 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Ralstonia solanacearum # 19 261 40 288 291 249 54.0 4e-66 MPRRESLASISQRRLQAVKSKSIYVLPNAFTAAALFAAYYGIIQAMNGHFSEAAIAVFFS MLFDGMDGRVARLTHTQSEFGVQMDSLADAVSFGIAPALIVYEFALVEMGKIGWAVSFVY ALCALLRLARFNCNVGVVSKNYFQGLPSPAAAALVCGFVWLAVENRLPDWLLPHQGTIAA VVTLYAGLTMVSNAPFFSGKSYAVVRTIPFWVIIVCAVLFIIISSNTSLSIFILFCLYAL SGFVYEFWCWWRGRPNPIQADLAAQQAALDAEAENESCPTCGSTAQKQ >gi|319804031|gb|ADMF01000032.1| GENE 39 41323 - 42072 817 249 aa, chain + ## HITS:1 COG:RSc1086 KEGG:ns NR:ns ## COG: RSc1086 COG0179 # Protein_GI_number: 17545805 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Ralstonia solanacearum # 16 246 1 232 232 148 38.0 9e-36 MFLNFQPSYPKDRILMPFLFAPPPQAVIPVQDERYEFFPVNRVYGAAKNYAADEKQRAAA AGFVPPLFMKSPNSIHPVADGEVYRWPMPARTARMVPELELVACLHKGGRNLSVEEAQEC IWGWCVGFDFTRRLTPEDLQAGGPWDLMKTLDGGAPVSHVRPAYRTPMPAPAEIYLYQNN QKKQSASTAFMIVPPAELIALVSRYWEVRPGDVIFTGAPVNVPEAQVGDRLEGGVNGVGT LKVEIAAAL >gi|319804031|gb|ADMF01000032.1| GENE 40 42208 - 43245 1330 345 aa, chain - ## HITS:1 COG:STM4400 KEGG:ns NR:ns ## COG: STM4400 COG0697 # Protein_GI_number: 16767646 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 308 1 307 321 186 33.0 8e-47 MLLGVLLGVAAGALWGLIYIAPLAVPEYNPVLVALSRFIAFGVISLPFLWVFRRELKAFT RADIWESFKLPLLGNVLFYCLLTICIRLAGAPLAGMFMAVIPVLVAIASNIRYAGSKSAV AWSKILPPLAVIFFGLIVANLTEFERAAAASAEGGMQYWIGVGFGLAAVVSWTWFSIMNA EWLLNHPKHNAAAWTALQGVTVLPFAACLFGILAWPAGLMDTGITLMGAAPMKFLAVALG IGLLCSWVAMICWNKMSQILPAALGGQLIVFESVFAVIYALMWRGEMPTLSMTIGFIILM GGVLGSLRVFQKHTESSTDDTPEHTLRTAGVANHAELQAEGTHDN >gi|319804031|gb|ADMF01000032.1| GENE 41 43833 - 45128 895 431 aa, chain - ## HITS:1 COG:HI0584 KEGG:ns NR:ns ## COG: HI0584 COG1473 # Protein_GI_number: 16272528 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Haemophilus influenzae # 9 421 6 419 423 361 44.0 2e-99 MHCASVYRDQMSALRRRVHRRPEEGWTEFETTALIVNHLRSLQFEVRCGRAVIHPDFVMG RDPHLVAEAIARAKRQGVSEELLSELDGFTGAVGIWDSGRPGPVTAFRFDIDCVQVGETS DPAHEANAGGYASERPNLMHACGHDGHLAVGLGVAQWIKDHADQLCGKIKLVFQPAEEGT RGARPMAESGILDDVDFIVCTHIGSSVPLHQVAVCTHGYLATTKLDIYFEGVPAHAGANP EKGRSALMAACSAAMMLVGIPRSGEGDTRIAVGRLTAGEGRNVVPVHARLQIETRGSTAD VNRYMVDCVKRITAGTALAYDVKSRIEKVGEASELITDQAVTDDLASIARAAPSIEAVEL WDDIRGSDDCTILINRVRAHGGKSGYFLFGCNQNGHHRSDFAIQDEESLPAAFELFTGFL KLKNGLRATCV >gi|319804031|gb|ADMF01000032.1| GENE 42 45206 - 46567 1040 453 aa, chain - ## HITS:1 COG:PA4001 KEGG:ns NR:ns ## COG: PA4001 COG2951 # Protein_GI_number: 15599196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Pseudomonas aeruginosa # 91 410 27 333 340 199 37.0 7e-51 MSNILRPLPCASRLMLLFTTLCALSACTAVKSAPPTPETTDTGAAPAAAAPQETPAALPA AAPAASTSSKPAEAPKAPAPRMPTKSAAESVKGSPAASDYVERTDVQEYLKDISNKQGIP LEWLMNEVALARYSPLSERYTTPRPNADKKTTAEKNFLLYERNIVNAERIERGAAFLRDH QEVFARIEEESGVSRYAVAAIIGVESIYGRNMGRFRVLDALMTLSFDYTRRAKYYRSELT DFLDFCWKQQISPVSVTGSFAGAMGLGQFMPASLRAYGKDGDGDGHIDVVNSPADGIASV ANYLAVHGWVRGERPLYKVSATDAIFKATGSGGIKTHTTAGALYKAGVKPLEAIPLKDDE PALLVDLPWIKSNNERGVDYYLGTGSFAAILRYNRSYFYAAAVSLLASELEDRDAQYLEA VQKRARQAIGESPAAPEADKPLEPALRPNDQQN >gi|319804031|gb|ADMF01000032.1| GENE 43 46713 - 47810 756 365 aa, chain + ## HITS:1 COG:RSc0919 KEGG:ns NR:ns ## COG: RSc0919 COG0123 # Protein_GI_number: 17545638 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Ralstonia solanacearum # 45 351 1 304 307 218 41.0 2e-56 MLAFRHYQLFAERNCIRVAPPEAMMQIPQLHKRMPDTLPKDWRLLPTGYFTHQLVGLPNP LDDAPESPDRIEAIEARLMLAGLEGRVRRVECGPAPREAVLLAHDSQYVDDLEHASLGDP EALKRFTEPDTRVGEDTFSCAMASAGAVVRAVDAIYGRSVKNAFCAVRPPGHHASRSRAS GFCYLNNAAIGALWAQKRWRAERVMVLDFDAHHGDGTEEILADRPGVRFLSLFQWPLFPH RRMEPTPSNAVLSPLPAGAGGEEIRNVVENVWLPEIDKFQPDLMILSAGFDAHCEERIAQ LKAGEMDYACVTRLLVEASFAYCEGRLVSVLEGGYELRSLARSVFTHLQGLIRNPLPAET CKDPN >gi|319804031|gb|ADMF01000032.1| GENE 44 47859 - 49187 1442 442 aa, chain + ## HITS:1 COG:AGc5017 KEGG:ns NR:ns ## COG: AGc5017 COG2270 # Protein_GI_number: 15890016 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 398 12 432 458 121 26.0 2e-27 MPGVSRREVWAWSAFDFANSGYTTVVLTAVFNAYFVSVVAADAPWATFLWTLIIAVSNAV GIFVMPVVGAIADASAQKKRWLFGATAICILGTAGLAFCGPGTIVLAAVMVILSNLGYNV GETLNSAFLPEIARPEAVGKVSGWGWSFGYCGGLVTLGASLALVQLGGSWGLTMDERIAG TMLITAFVFAVAAAPIFLFLKERAQPRASSLGALKSADGLWTLAGQSFREICSTLKSLGR FRDFAWLSLCGFLYQSGIAVVITLSAVYAAEVMGFTTVDTLMLVFLVNITAAVGAFGFGY LQDRIGHKRALGITLIVWVLMIVLAAMAVNRPVFWTAANLAGLAMGSSQSAGRAIVAILS PKTRSAEFFSFWNMALWLAAIVGPLAYGSVTWITNNDHRLAICVTGLFFAAAVLALIPVN LERGRRVAEETDAASRGTTSDH >gi|319804031|gb|ADMF01000032.1| GENE 45 49396 - 50151 998 251 aa, chain - ## HITS:1 COG:RSc1627 KEGG:ns NR:ns ## COG: RSc1627 COG4105 # Protein_GI_number: 17546346 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Ralstonia solanacearum # 11 241 38 267 289 216 46.0 4e-56 MRGCALLSVTLATASCSWLQSLDKDQTLDWSAEKLYSEARVALDDSNWTQAKDYYQKLEA RYPFGQYAQQAQIELIYATWKDGDAPGAVQAADRFLQTYPNHANADYVMYLKALATLNET DSWFNKLAGEDLAERDANASREAFDIFKELVMRYPDSRFTPEARRRMHGLVLAQAEHELK TARYYFVRNAYVAAIERAQRVVREFQNTPMRDDALELIAQSYEALKLTELAADTRRIIEL NKNGTIAQPSR >gi|319804031|gb|ADMF01000032.1| GENE 46 50183 - 51274 1033 363 aa, chain + ## HITS:1 COG:RSc1628 KEGG:ns NR:ns ## COG: RSc1628 COG0564 # Protein_GI_number: 17546347 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Ralstonia solanacearum # 41 352 45 353 358 276 49.0 4e-74 MTTEKVNLGLDDYNDEDFEDGFEETQPQTLSQVDLPKFRVEGFWGERLDKVLAAHLPDVS RARLAKLIENGSVKLNGAVTTKIRAKATEGDEIELLEPPKLDEALAFEPQSFVEFEVIYE DPSIIVVNKPAGLVVHPGAGNPDGTLLNGLLYHFPELKDVPRAGIVHRLDRDTTGLMVVA RTLAAQTNLVRQLQERTVKREYWALTMGTAAEDFVVDVPIGRDPKSRIRFKGFPGSTGVR AKPARTRARAVGWSSVDGIPASWVACRLDTGRTHQIRVHLTGEDLPLIGDQLYRGRAPGI AVKVENFLEFHRQALHASRLGLIHPATGEEMEWFVEPPEDMIDLMEQLGFGPWDRPVTVF EKK >gi|319804031|gb|ADMF01000032.1| GENE 47 51296 - 52108 679 270 aa, chain + ## HITS:1 COG:VC0710 KEGG:ns NR:ns ## COG: VC0710 COG1496 # Protein_GI_number: 15640729 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 12 267 2 239 240 204 47.0 2e-52 MAEHFKPELESILPNWTKGAPKHVKAFFTCRTGGVSSGPYGGPNGIMGLNLALHTGDVKS CVMMNRSIVTHCCPSEPKWLTQVHGTTVLCADDIDSAQSAPEADAQWTSTSGVVACVMTA DCLPVFIADRSGRIVAAVHAGWRSLADGILQRTVEEVRRHSSDLKPAVWLGPRIGADAFE VGEDVREAMCQHLPEEAVARAFKPAAAEGKFYADLGALAYAALESAGIDASDIADCGLST YRDPKQFWSFRRDGERSGRHAALIWIDPKP >gi|319804031|gb|ADMF01000032.1| GENE 48 52258 - 53604 563 448 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229207303|ref|ZP_04333755.1| SSU ribosomal protein S12P methylthiotransferase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] # 1 445 1 470 480 221 33 1e-56 MTSRHIPVVGFVSLGCPKALVDTERIVTELRARGYRIGSTYKDADVVIVNTCGFVNEAVE ESLGAIAEALKENGRVIVCGCLGGRTEADGSNFIMVRHPKVIGVTGPDSVDEVLAMVEGV LPRPHDPWDDLVPAAGVRLTPKHYAYLKISEGCNHHCTFCVIPHLRGSLNSRSMDSIIRE AMNLKAAGVKELLVISQDTAAYGVDKRYKLDFACGRPVHTKLIDLCRELGRLDLWTRLHY VYPYPHVDDIVPLMAEGLILPYLDVPFQHAHPRILKLMKRPACGEKNLERIAAWRRACPD ITIRSTFIVGFPGETEAEFEYLLDFLREAELDRVGCFAYSPVDGAAANDLPGALPDEVRE ERRRRFMEVQAEISLRKLARRIGRIEDVIIDEEPDEDGVAVGRTKSDAPDIDGVCYVTTD RKLVPGDIVPVRITANEEHDLVGREVVA >gi|319804031|gb|ADMF01000032.1| GENE 49 53640 - 53792 61 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIPQGLAPSRAAHHPRKAVRSLAVGATRAQVNRFTNCETAFLMEKMKPAL >gi|319804031|gb|ADMF01000032.1| GENE 50 53863 - 56124 2255 753 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFHQKLSMLAAAAAAALAVFPSLSQAVELGDLKVVSQPGQPLEAVLDVNDVDITISPLLV RVAPPATYLREGVEWPREAQDLKMARMGGEAGKVRVKVVGGQSLSEGFPLLIEMNAGGKV TVRSYRLDPVNGTFRVSAAEEMPAAEPKAAAGGESSAAPAAESAETAPQSMKAVDKSVEK VSETAEKPVEKTAFAAAEAHPKTTQRIEEKEKLVKSLEVGKKGGHRTGRYAPNVVREYVA LNGFNPNDAFTVQRDMTLWSIAKLYWPSCPGALLEQVAVALTQKNPSAFVDGDPSRIVIG QSLSAPLSDEVFAIDPMEAFRAVHGASAAVPGPTQNLIDAQHRSREAAGETAAAQIAALS RGESVEQVAETGRKALDAWESNQKKAAAAGAPTAAVNAPAEAAPALHEASESAAPAQPSA EANPPAAEPVSEAETAAADTGAAAQPTTETDSKTEAAASSPTESAPAEDAKPAQSAADAQ QPAAEEKRPLISYLLIIVGIAIIASIAWRKRREKAVKEAEEAVAAAKKGQGVVAFQRDVA PAGEAQLKAVEATVDEAVKNGTTAGAMGVGALAYTEAQMKADAQAAAAEAAAATAKKQVE EQPWLKADENDQELPPLSDEERESSERTAKQTAGMTAEKLKRVDLNLDAQTPAYVPPLAP EPIPTEAAAAPVKAAPVPQPAAQPAAPVPNEKERARLEAIDAKLNLAKSFIGLDAKKEAL ELLAEVKKEGSEVQRAAAQRLLDEVNGKSAGAR >gi|319804031|gb|ADMF01000032.1| GENE 51 56124 - 56933 645 269 aa, chain + ## HITS:1 COG:YPO2766 KEGG:ns NR:ns ## COG: YPO2766 COG0101 # Protein_GI_number: 16122970 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Yersinia pestis # 11 265 3 257 264 258 51.0 1e-68 MALVNTEPKTLALGIEYRGTAFNGWQVQPDHPSVQAALEAALSQFADHPISVICAGRTDT GVHATHQVVSFTSVARRPSAGWIRGVNAILPESVAVRWMREVDEKFHARFSARSRTYEYW IWNDPVRSPLFEGSAGWVFRPLDEALMQRGATALIGEHDFTSFRASECQAKTPVRTISEL KIVRRGALVGVRITANAFLQHMVRNIVGALIYVGTGRERPEWIAEVLAAKSRDAAAPTFS PAGLYLTGVGYPEHPHLPQLSSGPFGKVF >gi|319804031|gb|ADMF01000032.1| GENE 52 57072 - 57944 910 290 aa, chain + ## HITS:1 COG:RSc1980 KEGG:ns NR:ns ## COG: RSc1980 COG0777 # Protein_GI_number: 17546699 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Ralstonia solanacearum # 1 290 1 289 290 338 58.0 5e-93 MSWINHILPKIKREEAPKKPSPIPEGVWTKCPGCEQALYTEELDRSLRVCPKCGYHFRMG ARVRLHAFLDPATAVEIGAEIRTKDPLHFVDSKPYPARHAASEASTHETDALVVMSGLLR REPMVAAAFEFGFMGGSMGSVVGERFALGVEEAIRRRAPFVVFCASGGARMQEGLFSLMQ MAKTTNAARRLADYGLPFITVLTDPTMGGVSASFAFIGDVVIAEPKALIGFAGPRVIEQT VREKLPEGFQRSEFLLKHGQVDKIVDRRDMRAQISVITQLLMKKQPINGI >gi|319804031|gb|ADMF01000032.1| GENE 53 58176 - 59519 1157 447 aa, chain + ## HITS:1 COG:NMA0896 KEGG:ns NR:ns ## COG: NMA0896 COG0285 # Protein_GI_number: 15793864 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Neisseria meningitidis Z2491 # 20 440 3 424 424 327 42.0 4e-89 MTIPVVSVSAPHQAPAAGASLDQWLDFIEKLHDKPIDMGLERMQTMIARMGIKFECPVVT VAGTNGKGSTCAVMERIWREAGFRTAMHTSPHLIRFNERALLNGQEVSDEALIAAFGEVE SARGGMTLSYFEYTGLAVLKLFQNAHPDVVILEIGLGGRLDAMNAVDPDVSIVAAIGIDH TAFLGNTREAIAVEKAHIYRSGRPAICSDPNPPSTLVGYAAEIGAKLLLINRDFSVTEHP DGSFQFRMGDLSWQLPRPALKGENQYRNAAGALAAIISLLNRLPVTEAAAAAGLTQVRIT ARFEEITTQPCTTLLDVGHNPQAAGVLAENLHASRKPGEKTLAVFGMLEDKDRAQVVRLT APEIDRWFIAGLPGPRGGSAEALKAKMLEGGVEESAIESFATIADALYAARLSAEDEPAA PVRIIIFGSFVTVGQALEVFAKEGLRR >gi|319804031|gb|ADMF01000032.1| GENE 54 59765 - 60151 406 128 aa, chain + ## HITS:1 COG:no KEGG:BF4304 NR:ns ## KEGG: BF4304 # Name: not_defined # Def: hypothetical protein # Organism: B.fragilis # Pathway: not_defined # 6 119 2 115 117 155 64.0 5e-37 MNSSKKNYTLVHASGDARTELHDELGLTGCEVSVNQLPAGAAVPFVHAHQQNEELYGILS GAGEIWLDGEVIALRAGDWLRVAPAAKRAIRALPTEAMRFICIQTKCGSLEGFTMTDGMP CEEKAPWH >gi|319804031|gb|ADMF01000032.1| GENE 55 60303 - 61676 1105 457 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFFNPFRKNQRPEGVKLATMQTPEEAGTAAPHAEPTFGPRTEPSLGRFNEGTQTGGQTA PSAQPTEPPPFDFAEPAAQTAGEQIAPPQSSQAPQAPQPPERQAAAPTAPKAAPWDPYGI HAPTTDKNEPQLGASAEIVSAPEAAAILAPEAAGAPAAQAPFVMPEPRQEPDPLPAAAAE TEEAEALKPALKPVPREQVRAQAERERAAERPARRPLTDAELLARRRTKHRMVGAAVLLM AAVVAAPFVIDNEPPIDTSKLESTDINIPKESETSTTLNVPPAAHGDRAQAGDVDVSDTS MGRAESTAKANLEREAKGAAEAAPKQSGKTAAPAQAAKSEKVEKTPAKPAEKTAAKPDPK AQKPAQKPQPAAKSAGIAPPTGKGWYVQVVATSNEAAAERTVKKLAHLGLPAYRTNEGGA LWKVRVGLYAEKSEAEGVRGTIMLNGIAQKPYLAKKD >gi|319804031|gb|ADMF01000032.1| GENE 56 61871 - 62374 624 167 aa, chain + ## HITS:1 COG:YPO2771 KEGG:ns NR:ns ## COG: YPO2771 COG1286 # Protein_GI_number: 16122975 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, required for colicin V production # Organism: Yersinia pestis # 1 153 1 152 169 76 32.0 3e-14 MTEIDWIIIAVLALSTIVGIMRGVLREVLAIAGWVAGIFLAMNYSAVVAEHIPLESIGWL PRVIIAAVLIVVACLFVVGLLSAIIRRLLETAALRFEDRALGAVFGFLRGIVVVCACVFF FGMPASIHESRMWQQSVLIGPTETIINWSMPYLPAWLADMRRSYRRS >gi|319804031|gb|ADMF01000032.1| GENE 57 62551 - 64062 1770 503 aa, chain + ## HITS:1 COG:RSc1976 KEGG:ns NR:ns ## COG: RSc1976 COG0034 # Protein_GI_number: 17546695 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Ralstonia solanacearum # 1 485 1 481 511 633 62.0 0 MCGIVALLSNEPVNQRLYDALLLLQHRGQDAAGIATLDGLQFHIHKAMGLVRDVFRTRNM RDLTGNVGIGHVRYPTQGCASSNQESQPFYVNAPYGIMLAHNGNLTNAEALKQDLYEHDH RHINTTSDSEVLLNVLANEISRVCEGRGLDADGIFKAVAAVHKRVRGSYAVVALIAGKGL LAFRDPHAIRPICFGSAIAANGEREWMVSSESVTMMGLGFKLERDLEPGEALWIDFKGNV ETRQCAENPVKNPCAFEYVYFARPDSLIDGISVYGARLNLGVYLAETVKKTIDLKDVDVV MPIPDSSRPCAQELAKQLELPYREGFIKNRYIGRTFIMPGQTTRKKSVRQKLNAMPVEFE GKNLLLVDDSIVRGTTMKEIVRMARESGAKKVYVASSAPRVMFPNVYGIDMPTKSELICG DGKDADAVAEVIGADKVIFQTLDGLKNALSDLNPSIPAFDCSCFDGVYVTGDVTSEYLDR LSQAQAAPQPKAQDDEEGEGANE >gi|319804031|gb|ADMF01000032.1| GENE 58 64159 - 64716 377 185 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKRFAAAAGSGSGFRRSLGALALMLTCGVFAAFSALPAPALAGPPPGMHHPGPGFGGPG HRPGFRPGPPPPPPRYHRGWHPRPWYRSWGFWVPTITVGTILGAELYRSSAPRYVEVPVQ TVPVTPSTSYAAAAPAASGAAGSGSYPWYWCSSEQGYFPTVRSCPLGWETVMGSSSTTPP APPAP >gi|319804031|gb|ADMF01000032.1| GENE 59 64713 - 64811 58 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFDLSVPALTLSYLNNDSEIAAMAIAKKGALL >gi|319804031|gb|ADMF01000032.1| GENE 60 64902 - 67490 2168 862 aa, chain - ## HITS:1 COG:PM0644 KEGG:ns NR:ns ## COG: PM0644 COG4953 # Protein_GI_number: 15602509 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein PbpC # Organism: Pasteurella multocida # 105 859 33 780 785 474 37.0 1e-133 MTDDLSHKPVDASGQLPAAGAANTAPTEQPAAASPQSSAAAESEKSEQATAASPIPQASE VGRSPAVVFLRRTAYVVLSAAIMTVGLYGGYAVLKNRAASEAAPPLLEGIPFSSVLYSRG NVLLRIVPAADGIFRVKTPLESIDPKLVEATIAYEDRNFYKHPGFDLLALIRSAASTYIG GWRTGASTITMQLARMQLHLQTDTPDGKLRQIWHAMRYEAHYTKRQILEAYLNLAPYGSN VEGAEAAAAVWFHKEASHLTPAEVAALAVIPQNPVKRRPYTQGSTPLDTARLRLARILVE QGVYPPSAAAALRAPLEVFGPEHLPFLAPHYAQTVLNRIVGTPERSEPNADKTAFKAGKL KGTLSLDVQSAMEALVRETIARLSPWGVKNAAVSVVDARDRSVLAMVGSANFFDPSIQGE VNAWTAKRSPGSMLKPFTYALALDQGLIHEKTVLIDSPIAVGGWAPDNADGSFRGPLSAE DALVLSRNIPAVDLEKRLSPGLYEFLKRAGVELPHDKNWYGLSLVLGGAEITMADAAKLY AMVAGEGLLRPLRLLEAQASPAEADVLSREAQFVLRRMLASRGESVTIRGARRELLYKTG TSNGWRDAWTAGMVGPYVIVVWLGDFAGRPNPQLQGAHLAAPLFRAAALRLGNIPALDWP AAVSAQQEAEDKHLKVALEPVCAATGDLNIRLCSRRTNAWILPGRTSVRDSGVFREIWID KETGLRACGPGPGIERRVWEFWPTHFQKVFLAAGIAKEPPPPYTAQCAERLGVPGGRAPV ITSPKAGAAIYSPAGFDAARVLLAAGADPDAAILYWYADGAFLGARRVGKALEWSAPAGT HELAVVDDLGRTSTMRLTIRRR >gi|319804031|gb|ADMF01000032.1| GENE 61 67487 - 73291 4973 1934 aa, chain - ## HITS:1 COG:RC0835 KEGG:ns NR:ns ## COG: RC0835 COG2373 # Protein_GI_number: 15892758 # Func_class: R General function prediction only # Function: Large extracellular alpha-helical protein # Organism: Rickettsia conorii # 29 1627 23 1613 1892 432 23.0 1e-120 MRCFKPLNSSPSLLVCALAGAFACAASAAPAANDVQSIWLAPTGTSPLSAKAPLRIEISP AESQCRAAYGDEWYERCQLTLGKPGTRVQGVQLTPETAGEWRWASPSTIVFTPKEAWQPG KRFRTSLIGLPMPLRASLTTNFLTVETPPLTAVTSRAQVWIDPLEQKNRALSFEFDFTTS VSAAVKTRIEQNFTLDFDAKSGLKLGKPSFVWGENSESLYVKVPVIELADSPVVASALVK GAAGRAKLQDGRFTVPKGFEAAKASVTVPGLSTLFQITEASILPVKDDGLNAEYEITIAS SLALDPTELSKRIRVLTLPKKLDSTAASDTVWTAAPLIDDEVLKRASALEVRPDLEWSTT ERVKLRLKATPGDYIYLELPKGFGPAGMPGLEDGWKSVLLLPQPSAEITFLQPGNMLTLA GSWELSLFTAGIDKLNWRIARVRNEFLSLAADGWNVMKSIAPDSWVTASSGSTDLGEVNP KRPGEARFTALDLSEAVMGSGPGLYQIELTGTRMKDGKPETVANASKRILITNIAMIAKT SASGALDLFAANFADGKPAAGLKAILLAENGTVLETTETDADGRAHFKSTRGWEREKKPA AAALRSKGTDLAWLSLKDGSNVAETLRWDVGGRYTGGTGLSAFSFADRGIFRTGETVHFG FGVRKLDFDRLPEGTPIELKLTNDAGRVLEKRTVKLNDEGLGSFDWKIPDGTLPGTLRLD LFAGGEERSALSTTSVFVGDFSPETLSLSAELPADEAKAGWVKPNDLPISATLTSLFGAG AQGRRVTGTAEVTPLSEVKLPGWDGWLFPSPGAAPWKALPTSRTLDIEAAVTPGSGSIDA MVPLSLLELNGFADVDLTLTGTEAEGAGAVERHLSFIASPNDIAVGWRIEETPQPSWFLL TGEPASMALAVIDRSLKPKAGTRLKVTIEKSRWITTLSEDSSGRFTYSDDEAPEVRQTID VTADDQGIARVKLLTGEPGNWIVRAADESGKELLVIPYGTAGGRLADFADGMLPTAELRA KLEKTNLNAGDTVRVSLLSPVSGFALASFESAEVISTKWVSVNAGENLLELEAPADFTGR AWLRLSVVRGQTDAKKFLKGFAETAVPIELNASAKTLPVTIKAPEKVENARRIPIQVSAA AKAKVVLFAADDGLLSLTNWQTPDPIKTMLLDRALEVDTRETLSLLMPDAGSLKDLIKAP VGGDFMASAKAAAGFGSPFKRSFGPSTVWWGGLVEVGPDAQTFTVELPEGYAGRVRVSAV GAAEASAGSAQALIVAAPPLALSPALPGVLSLGDIFRAGAVVTPNMPAEAASLTITPPAA FAAEPEVLPLNFPAVGGISASAQFTVPNQPSALGEHPFILKADARAKENGATLSAQRSES IVVRPASLLQTRLYAGRAEHSADKSAYEVPTVLYPINDRTRFIAASTPAALAPELGRPFQ TADNDFGAVLPRLTASLPEVLLTLNTDAARLLPQSVLTTDEPAAKKAAQDAAQRREKVYA AVRSTLTREGLKAMPWSEFDPFLSALVLDYLVDALRLDSSALEPLQLLRSRLVRSVNLDP QTIDDARTSAYTLWVLTREGTMTTAQLEALRASMTSRFEGWERDAAASFLAAAYSRLRLR DEARSLVKSTPSTARAAGAWTPETAAALAASALSEAGLGQEPAARFLVSMAGEDLARTFA AGIVSPLYAAAAARAALTPEVGGLTAGESAASPDLVCTRRADGFPADQDRLVLGAWGALL DAPGCLAAEASGLPASPYVWWQVEQTGYIVPDDTQPADRSALEVERTYLGADGKAKTEFS TGERVTVRVRVKSFAGESAVRDAVVTDLLPGGFVWAMPAGACPEGALECRRAEDRVQWAV PALTNWEPLTFTYTVRAAYPGVYRAGSAAAESLSNPALAAQSRSAKIRITAPEEPSGTNA PQPTTSPTPASAVQ >gi|319804031|gb|ADMF01000032.1| GENE 62 73800 - 75572 601 590 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 55 565 57 560 592 120 25.0 5e-27 MRYANVLLILFLCAISFASESAPLRFAAAEMPKPDPCLPFITETYKWVEKHWPDGATFRY YDVTSLEKAVQNREIDIVLTEAGAAARLRSEGARPFLTAVSKRHPNPASSQGSVIFVRSD NENVQKIADLQGRKLAATSLGDFTGYQAAMGEIFKRNYDPEKFFSAVTFVGSSSKLAMQH VVQEVIDGRADAGVVRTCFLEDLTTHKGVLLPLKVVEPYSDSKFACSRSTELYPNWTISS VPSLTAPELRRMFEILLQMPPTSSGMFWSLAPDFSATDRLMKDLRIGPYAFLRGWTLSRF WEEYRLYIFAGLLLVVGLLIHVRRTEILVERRTRELKDAFLREEALKAQTQEAEARLEQF QRAAIAGQVSNIFAHEIKQPLHSVSCFSHGLLRSLDSGSGSPDLMRRGLEKIESEVHEIG RIVDRVRSYAKGHAGERQWLNASAALEGILLRETRKHDVVARFHAPKGAVQIHADELELR LIFLNLIKNACEAAVAAKAPIVSAAITTSGEDVIVEIADNGPKLSEDDLKRLNAPLSSTK KSGLGLGLPIVQGLVARCGGTIAFRRIPTGGLLCRVHLPVSPSEQQELQL >gi|319804031|gb|ADMF01000032.1| GENE 63 75569 - 76201 409 210 aa, chain + ## HITS:1 COG:mll0983 KEGG:ns NR:ns ## COG: mll0983 COG4566 # Protein_GI_number: 13471099 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 2 195 31 224 246 139 39.0 3e-33 MKKPLQPPLIRIIDDDAQALEAVDFMLKCEGYSTVAYSSAAEFLVDDIPSRPGCLLSDIR MPDMMGTELFDELLNRNYPHPVLFMTAFGDIESAVTAMKKGAVDYLVKPVAAEKLFAGVV NALKIDRKRREGLVGSPFWSDRWASLTDREREVVKLVAKGLMSRQIAIELDISQRTVEVH RASGLKKLQIQTPAQAALVLSEIEDQNRTL >gi|319804031|gb|ADMF01000032.1| GENE 64 76355 - 78187 1552 610 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 47 595 40 456 484 84 23.0 9e-16 MSKKGISRRTLFGSTALMAGANLLIPSAAAQVVPNSCAPLPTKWDFEADVVVIGAGACGM AAAIRAADFGAEVLVVDTNYDVGGHAILSAGSIALGGGTALQKKYGIQDDPETYFQDLTD WSVTEVDGMPDYRFADRAVQHALAYNGPAVYDFLAANGLPFEDEAPDNFQANHASGVTAL RSHHVKWKNGVGGPSPTGTNGTSVMRPLDESARKRKNIRFLFNYHMDRIFREQPLEGRVL GIEAHYTPTILPGQTKPLVSWKTDGNIDFHEPSVTVKARKGIVIATGGNTGNVEFRRMFD PRLTSEFQLGGGEWSPQDGSGELAAMAIGAALWGCCNQAMNRNGALRRGAFVGSRTSYVA WKPQSPIWGKVKATGLFVGNWQDCIAVNQAGKRFYDETKPAYPNGTCFGFFDKSGGYVHG DWRNSSKIKPQFRNYIDAACAINEGSQGPDWEAGPQWAIFDSAAIKREQWKIDENSGEEG YFFKADTLDELQEKLTQNPYQKFKLPKGRLAETVARYNAFVEKGVDEDFDKPKPRYKIEQ GPFYAAWCTVCTHDTYAGLRVNGKNQVADMAGKVIPGLYCGGESAGGATQHGMGRCFTAG YIIGAEVVKG >gi|319804031|gb|ADMF01000032.1| GENE 65 78263 - 78613 207 116 aa, chain + ## HITS:1 COG:no KEGG:Glov_1004 NR:ns ## KEGG: Glov_1004 # Name: not_defined # Def: hypothetical protein # Organism: G.lovleyi # Pathway: not_defined # 28 116 77 165 165 87 52.0 1e-16 MRRVSPVLLVLFSILTFCGTAASAEHFGADRHAAAGVKCSACHGSGAANPKMPTIETCTQ CHDLKKLVAKTETVKPTNPHFSPHYQDQLDCTNCHLQHGPTENYCDQCHQFNFKVP >gi|319804031|gb|ADMF01000032.1| GENE 66 78876 - 79067 145 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKSEHAATIVGGTYAFMYGTYSRRRLCLSHVCACLAVKDVYVRSFILFVRKGHKAIPLK FKT >gi|319804031|gb|ADMF01000032.1| GENE 67 79240 - 80592 1410 450 aa, chain + ## HITS:1 COG:PA3517 KEGG:ns NR:ns ## COG: PA3517 COG0015 # Protein_GI_number: 15598713 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Pseudomonas aeruginosa # 1 445 1 447 477 324 39.0 2e-88 MPSTAIDSQIHGCMFSTDEMRRIWSDQSWAQKWLDTEAALAKAQGELGVIPQEKAELINK YAKAELLDIPSIGEFYKSSITIVPLLKAFKKVLPDNAGEFVHWGATSQDIVDTGMVLLQR DAYQVILRDMKACLGYCLDLAKKYNHTVMAGRTHVVHAIPITFGYKAAVWADELGRDIER IEAMAPRVFVGEMSGAVGTLASQPEKGLETQKRMMEILGLGVPTIAWHVARDSQAEFASV LALCAGTLSRINHEILTLQRTEILELEEPFFMGKVGSSTMPHKRNPAVLENVLALCRNVR SIAPSIVESMVSENERDWGCFLSEWEAIPRACHMLGCALEKSKNILKNLIVYPKHMERNL FAQKGLMMSECVMMHLARKLGRMTAHSIVYKSCMEAYEKEIPLKDVLMHTPEVTAAFTED EIDHMLNPHTYIGLAPEFVDRVVEKWAKTC >gi|319804031|gb|ADMF01000032.1| GENE 68 80777 - 82183 1243 468 aa, chain + ## HITS:1 COG:CAC1590 KEGG:ns NR:ns ## COG: CAC1590 COG0471 # Protein_GI_number: 15894868 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Clostridium acetobutylicum # 17 468 25 476 476 358 41.0 1e-98 MNKSKLIRWSVPVAVLVLLWVIPTPEGLTPAAWHMFAIFTATIAGILAAPVASGALMFIA LAITYFTNTLPLNDVLKGFASGTVWMIFSAYVLSLGFVQSGLGRRIAYRALSLFGGSSLG VAYALGIADLIMAPAMPSVTARSGGIILPVAKSINEVLGSQPGPTGKRIGDFLIMTCFQF TPITGALFMTGMAANPLCAQLAKDGLGVELTWGSWFLAALVPAMICFIALPLLTFKFMDP ELKRTPQARVMGREELKKMGPMGRQELLVAVGFILALIGWGTSLITGFNANAIGLGLVAF LFVSGAVQWKDVLNDKAAWDTVVWFGAIISLATGLTKLGFVKWMSLGFASSLGGLDWVTT FLILGFAYIYLHYVFATASGHVAAMYVPFASVAIAAGAPAPMVAICFAIFSNFMWGITEY AGGPGPIYFGQGYFERPRFYKINFCIVTFCVLVVFSSGMLWWKAIGLY >gi|319804031|gb|ADMF01000032.1| GENE 69 82280 - 83044 526 254 aa, chain + ## HITS:1 COG:BH0914 KEGG:ns NR:ns ## COG: BH0914 COG2188 # Protein_GI_number: 15613477 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 6 246 10 246 248 70 24.0 4e-12 MTRELLKDKLTEKLIEGISSGRYPVGSLLPKELQLVESEGVSRHTVRAALAKIERLGLIQ RTPHVGTRVVSRGRVQTFDQELSTLSDLGRLAAHNPRHILDIREIVVSRELAAQIQCPPG ETFIRFSMIRMGSKRGAPPIAWTSEYVNREWTKLVAEAPKHPEKLMIELIAELYGKTCVE VRQSIEATTLTAEAAANLNESEGTPCLRIRRRYVSARGKTLLITVSYHPGDRYAFNLNVR LDRQKQCVESDLMD >gi|319804031|gb|ADMF01000032.1| GENE 70 83152 - 84321 1060 389 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDAIIEYASTPEGMLIVVGVAFIGIVLLLTALIFWIGSLLRRRGVKIDQTPDTDDETADS SPSADESASQDPLAAFDREAAEQSARAASKAPIALARLRAAGPDITAAAEPKLPEPVLEQ NPSVQSAAAPESAPAVSAYAAEVQPPMPAAAAPAFWESPAKLQPKAPDPLAGTRFLLTLP FERRSGLSMAHADLCGIGVEAVFFDPEPVSRLDEDAVRLVPFLPANAAKLLLTESDRETF KAGALCAQPDAVLELPAGLIALEYKSKGGRFDDPLRWAETMRTKDLIQTVLAAAALSVAA GRPAAPVLRTTNAVFFLRPTNELKNLLSAHVQEAESFLLSTSEGAGRPGISASDYAALMI PALEKLYPREPSSGSEAGEAAHQEMLRTR >gi|319804031|gb|ADMF01000032.1| GENE 71 84321 - 85196 801 291 aa, chain - ## HITS:1 COG:NMB1908 KEGG:ns NR:ns ## COG: NMB1908 COG0313 # Protein_GI_number: 15677739 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Neisseria meningitidis MC58 # 1 236 6 240 241 169 45.0 4e-42 MSGQLYLLPCPISEAPALDALPASTVETARRIDHFLVEAARTARATLKAMGHPKPIAELD IVEIGHDPAPELISEWLQPVLDGADAAVLSESGCPGVADPGAQIAARAHELGIRVVPLTG PSSILLTLMASGLDGQRFRFSGYLPKHDAERRAAILAAEKASRASETQLFIETPYRNTAL LDALLETLAPDTRLTVAIDVTGQNESIRTLTAAAWKAIPKAMRTLPKLPTVFAFLAKPGN RAPRYAPECAGGKRAHTAPSSKPAVLNNRPKQAFKTHRPEGSPVKTLKGGR >gi|319804031|gb|ADMF01000032.1| GENE 72 85262 - 85849 504 195 aa, chain - ## HITS:1 COG:RSc1046 KEGG:ns NR:ns ## COG: RSc1046 COG0424 # Protein_GI_number: 17545765 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Ralstonia solanacearum # 1 185 1 186 194 154 52.0 1e-37 MKPLLILASSSRYRRELLDRLCLPYESISPDVDESAQPGETPRETALRLAELKARAVWNQ HPGSVVIGSDQTADLHGVRLGKPHTRENAVKQLSAMQGEETVFATALCVIDAQGHAHTAE SLTRVRMRPLSQSAIEAYIDREKPFDCAGSAKIESLGIALMSAVSSDDPTALIGLPLMKL TTLLKEAGIEVLPGL >gi|319804031|gb|ADMF01000032.1| GENE 73 86019 - 86522 592 167 aa, chain + ## HITS:1 COG:RSc1047 KEGG:ns NR:ns ## COG: RSc1047 COG1399 # Protein_GI_number: 17545766 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Ralstonia solanacearum # 6 166 7 176 179 84 35.0 7e-17 MPQFINIFELARRGETIEGEVAVKDLPNLLGFTATENGTLRFVATGLGERRGLPAVDLDM EGDVDISCARCLKPMSVHIASGAVFRLVRTEAEANALPIEDDEEDEDVLVGSRSFDLEKW VEEEAILALPRMVVHDACEEKREWSDGEEPQEEKRPNPFAALAALKK >gi|319804031|gb|ADMF01000032.1| GENE 74 86600 - 87226 268 208 aa, chain - ## HITS:1 COG:mll0983 KEGG:ns NR:ns ## COG: mll0983 COG4566 # Protein_GI_number: 13471099 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 8 193 37 222 246 136 41.0 2e-32 MNHSTETPLIRIVDDDDAILTSVSFLLRQEGYEVKTWANPLTYFCEDQPSRPGCLLLDIK MPQLNGLEVQRQLARRAITTPVIFISAHGDIETAVYTMKVGAFDFITKPIRPLKLLEAVG AAVALDARRKKGVIDSKEAHRRLLKLTSREEQVLRLVLDGLSNAEIGARLGITERTVENH RANGYRKVEVQDVEGLELVFKGAEKIVS >gi|319804031|gb|ADMF01000032.1| GENE 75 87210 - 88199 596 329 aa, chain - ## HITS:1 COG:VC1925 KEGG:ns NR:ns ## COG: VC1925 COG4191 # Protein_GI_number: 15641927 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating C4-dicarboxylate transport system # Organism: Vibrio cholerae # 67 329 333 597 597 102 27.0 1e-21 MTPTSNGLLWSVASNYSRIDALLKKLDLDENAELRRWSLPRLWNEYLSWFIVAILSLLGL CLHSFVVSYLVRHRTQELSDALNRQRELEMETRSASTRLEKLQRIGIINQMGSIFAHEIR QPLSAIGCFAYSLRRLIERRGSRQDMLEAIEAIEKETDRSEAIVERIRTYVREHKRRLKS CPWDILIDDAIASFKTSSRIPIPVRWINKTDGRVLTDPFEMELVIVNLLRNSAQAQSSID QPEIQLDLTQKEHSLCLVITDNGPKLPKEALQELVGNFGSGKPQGFGMGLMVVQSIIESQ NGTMTLSSSRLGGLAVTIELPEVTDESLD >gi|319804031|gb|ADMF01000032.1| GENE 76 88677 - 89123 354 148 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 2 141 427 564 570 104 37.0 8e-22 IILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGY RFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVR NRVAQYRWSTETTARDQMFLELFFGESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:19:32 2011 Seq name: gi|319804025|gb|ADMF01000033.1| Sutterella wadsworthensis 3_1_45B cont1.33, whole genome shotgun sequence Length of sequence - 4950 bp Number of predicted genes - 6, with homology - 4 Number of transcription units - 4, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 161 - 478 290 ## Ppha_1041 transposase IS4 family protein + Term 510 - 548 0.3 2 2 Tu 1 . - CDS 497 - 961 238 ## COG2801 Transposase and inactivated derivatives 3 3 Op 1 . - CDS 1481 - 2002 458 ## Dret_2535 putative transposase 4 3 Op 2 . - CDS 1932 - 2489 115 ## 5 3 Op 3 . - CDS 2544 - 3887 499 ## COG0582 Integrase - Prom 3923 - 3982 3.0 - TRNA 4151 - 4243 64.3 # Ser GCT 0 0 - TRNA 4281 - 4357 87.5 # Arg ACG 0 0 + Prom 4357 - 4416 2.0 6 4 Tu 1 . + CDS 4476 - 4634 71 ## + Term 4635 - 4669 7.4 Predicted protein(s) >gi|319804025|gb|ADMF01000033.1| GENE 1 161 - 478 290 105 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 3 98 471 564 570 74 36.0 9e-13 MTSVRGKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMT LKQLLDWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD >gi|319804025|gb|ADMF01000033.1| GENE 2 497 - 961 238 154 aa, chain - ## HITS:1 COG:YPO1873 KEGG:ns NR:ns ## COG: YPO1873 COG2801 # Protein_GI_number: 16122124 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 154 114 264 319 129 46.0 1e-30 MWTWDITYLRSSKYTGRFYYAYVIVDVYSRMVVSARVFEADNADFAVRFLGDAFRRYGIK PGQLVVHSDNGASMKAAPTLALLEKNGITFSHSRPRVSNDNPYSESFFRTLKYSGDYLYP RDGFDNAEEAEQWVQGFVDHYNEHHRHRGIRMVT >gi|319804025|gb|ADMF01000033.1| GENE 3 1481 - 2002 458 173 aa, chain - ## HITS:1 COG:no KEGG:Dret_2535 NR:ns ## KEGG: Dret_2535 # Name: not_defined # Def: putative transposase # Organism: D.retbaense # Pathway: not_defined # 5 172 7 158 160 66 28.0 4e-10 MRYSQEFKDNVVARLLSKELSISEAVEQYSIGKSTISYWLKIAREQAGCGTLPNKGNPKL MASLKLPKGVTYLQAHTAVNAKAFMSETDFGQFCRKHGYLASTVDAWTEWFNNHPDVVDK KRHDAQMSAMSELKKENARKDREIARKDKALADAATMLMLSKKAEAIWGAKES >gi|319804025|gb|ADMF01000033.1| GENE 4 1932 - 2489 115 185 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELVRQTADISSTEGANQCGVVSVLLNETTPQTLEGNDWSSLSPPSIQSGGKSLRSNAGR RSCLIRNSSASVSVNHEFLGDVDATVTPAAGVARKLSDSLDSTWVSYGLGAQFDTSKNLS FYGVLERSSGSDYAEDFKYSVGMPLDVILTFATPSTFHGVAKHAIFAGVQRQRRSAPAEQ GAQHL >gi|319804025|gb|ADMF01000033.1| GENE 5 2544 - 3887 499 447 aa, chain - ## HITS:1 COG:RSc1896 KEGG:ns NR:ns ## COG: RSc1896 COG0582 # Protein_GI_number: 17546615 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 18 439 20 394 411 128 28.0 2e-29 MPKFVTPMPLVIFRQLKSPGFYPLGGVQGLYLRIRGASESYILRYQDTFGKRRSMSLGLR RSMSLSEARTKATEIRARLSEGINPTPTRATRRKAKTQQSSSKTAPTSKTFAEVMDLWLK YRVENNYWVNDRKEPYATSNLLARHVLPRLGDIGINAITVEDIRDVLAPIWTTKTITAKK ALRNIRAILNWARAMNYSSSAEDLCSLQGPLGVLMEGARKNAVRKENFAALPYDRIPSFI QALYHLEGTSRWMMMFAILTASRMKAVRLATWGEIDVEKRIWEIPPEHDKIKDPKRDRTI YLSQQAIEVLEKVRPNLPRADDLIFKADNGGSFSDAATTALIRRMHARQKALAGTGWIDP DKSKREGKICIVTAHGTARSGFRTWAKDDRLGNNRRYDQEAAELCLLHCKASDDYHGAYD RARLSTERQRLMNDWGKFCFSLVTDKC >gi|319804025|gb|ADMF01000033.1| GENE 6 4476 - 4634 71 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTRLAAIDILSALNLWTTHPLSSGLPLFLIPELRAVSGNLRQPEVKCFAYK Prediction of potential genes in microbial genomes Time: Sun May 29 20:20:10 2011 Seq name: gi|319803968|gb|ADMF01000034.1| Sutterella wadsworthensis 3_1_45B cont1.34, whole genome shotgun sequence Length of sequence - 72542 bp Number of predicted genes - 59, with homology - 48 Number of transcription units - 32, operones - 11 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 282 307 ## - Prom 362 - 421 2.2 + Prom 352 - 411 4.3 2 2 Op 1 24/0.000 + CDS 443 - 2038 1537 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 3 2 Op 2 26/0.000 + CDS 2041 - 3135 1296 ## COG4603 ABC-type uncharacterized transport system, permease component 4 2 Op 3 5/0.000 + CDS 3136 - 4056 1191 ## COG1079 Uncharacterized ABC-type transport system, permease component + Term 4057 - 4104 1.0 5 2 Op 4 2/0.111 + CDS 4150 - 5286 1570 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 5308 - 5380 11.6 6 3 Tu 1 . + CDS 5407 - 6555 1483 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein + Term 6608 - 6645 6.2 + Prom 6773 - 6832 2.7 7 4 Tu 1 . + CDS 6932 - 8983 350 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 + Term 9015 - 9062 3.2 8 5 Op 1 . + CDS 9084 - 10523 305 ## PROTEIN SUPPORTED gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 9 5 Op 2 . + CDS 10607 - 11263 788 ## COG1994 Zn-dependent proteases 10 5 Op 3 . + CDS 11287 - 11859 528 ## COG0500 SAM-dependent methyltransferases + Term 11912 - 11950 0.5 + Prom 11899 - 11958 3.5 11 6 Op 1 . + CDS 12089 - 13264 1435 ## COG3317 Uncharacterized lipoprotein 12 6 Op 2 . + CDS 13277 - 13594 254 ## 13 6 Op 3 . + CDS 13567 - 14127 428 ## 14 6 Op 4 . + CDS 14200 - 14835 835 ## COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 + Prom 15291 - 15350 6.0 15 7 Op 1 7/0.000 + CDS 15388 - 17529 2143 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 17541 - 17590 10.4 16 7 Op 2 14/0.000 + CDS 17659 - 18462 194 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 17 7 Op 3 33/0.000 + CDS 18504 - 19475 795 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 18 7 Op 4 . + CDS 19472 - 21469 2100 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component + Term 21705 - 21755 -0.4 19 8 Tu 1 . - CDS 21517 - 22104 471 ## COG1309 Transcriptional regulator - Prom 22138 - 22197 3.8 - Term 22162 - 22213 11.1 20 9 Tu 1 . - CDS 22265 - 24031 2388 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 24195 - 24254 6.2 - Term 24198 - 24241 7.1 21 10 Tu 1 . - CDS 24263 - 24538 198 ## + Prom 24124 - 24183 8.9 22 11 Tu 1 . + CDS 24359 - 24730 123 ## 23 12 Op 1 1/0.222 + CDS 25009 - 25653 387 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 24 12 Op 2 10/0.000 + CDS 25650 - 26825 466 ## COG3839 ABC-type sugar transport systems, ATPase components 25 12 Op 3 38/0.000 + CDS 26822 - 27733 1056 ## COG1175 ABC-type sugar transport systems, permease components 26 12 Op 4 . + CDS 27720 - 28547 621 ## COG0395 ABC-type sugar transport system, permease component 27 12 Op 5 . + CDS 28557 - 29465 334 ## COG1409 Predicted phosphohydrolases 28 12 Op 6 . + CDS 29471 - 30754 1312 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 30815 - 30876 12.0 29 13 Tu 1 . + CDS 30884 - 31645 407 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 30 14 Op 1 40/0.000 - CDS 31674 - 32942 721 ## COG0642 Signal transduction histidine kinase 31 14 Op 2 . - CDS 32965 - 33639 456 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 33771 - 33830 8.6 32 15 Op 1 . + CDS 34145 - 35026 638 ## Slit_2497 decaheme C-type cytochrome, DmsE family 33 15 Op 2 . + CDS 35042 - 36955 1682 ## + Term 37001 - 37039 -0.9 34 16 Op 1 38/0.000 + CDS 37700 - 39268 2100 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 39292 - 39339 7.3 35 16 Op 2 49/0.000 + CDS 39414 - 40349 1311 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 36 16 Op 3 13/0.000 + CDS 40361 - 41245 974 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 37 16 Op 4 1/0.222 + CDS 41242 - 42891 872 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 38 16 Op 5 . + CDS 42919 - 44091 1216 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 44158 - 44203 6.1 39 17 Tu 1 . + CDS 44546 - 45067 304 ## COG3710 DNA-binding winged-HTH domains - Term 44808 - 44855 -0.3 40 18 Tu 1 . - CDS 45061 - 46308 1254 ## COG0531 Amino acid transporters - Prom 46486 - 46545 5.1 41 19 Op 1 10/0.000 - CDS 46627 - 47973 1474 ## COG0531 Amino acid transporters 42 19 Op 2 . - CDS 48051 - 50240 2682 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 50269 - 50328 5.0 + Prom 50697 - 50756 7.0 43 20 Tu 1 . + CDS 50934 - 52481 1238 ## COG1757 Na+/H+ antiporter + Term 52505 - 52564 3.1 - Term 52885 - 52918 0.6 44 21 Tu 1 . - CDS 53028 - 53921 482 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 53983 - 54042 6.0 + Prom 54354 - 54413 10.7 45 22 Op 1 10/0.000 + CDS 54585 - 55901 1562 ## COG0531 Amino acid transporters + Term 55936 - 55997 12.0 46 22 Op 2 . + CDS 56028 - 58163 2648 ## COG1982 Arginine/lysine/ornithine decarboxylases + Term 58185 - 58218 -0.4 47 22 Op 3 . + CDS 58335 - 59852 1532 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 59881 - 59927 9.4 48 23 Tu 1 . + CDS 59967 - 61268 1110 ## COG0531 Amino acid transporters + Prom 61391 - 61450 3.8 49 24 Tu 1 . + CDS 61572 - 62249 401 ## COG3710 DNA-binding winged-HTH domains + Term 62376 - 62416 4.1 - Term 62364 - 62404 4.1 50 25 Tu 1 . - CDS 62471 - 62605 240 ## - Prom 62663 - 62722 5.7 - Term 62863 - 62907 13.4 51 26 Tu 1 . - CDS 62978 - 63133 82 ## - Prom 63188 - 63247 5.6 - Term 63388 - 63429 5.5 52 27 Tu 1 . - CDS 63500 - 63694 271 ## + Prom 63925 - 63984 3.6 53 28 Tu 1 . + CDS 64129 - 65460 1115 ## COG0477 Permeases of the major facilitator superfamily - Term 65556 - 65618 4.0 54 29 Op 1 . - CDS 65625 - 67160 2087 ## COG0747 ABC-type dipeptide transport system, periplasmic component 55 29 Op 2 . - CDS 67157 - 67456 81 ## 56 29 Op 3 . - CDS 67480 - 68649 1061 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 68680 - 68739 2.6 57 30 Tu 1 . + CDS 68913 - 70358 1148 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 70377 - 70419 0.7 58 31 Tu 1 . - CDS 70440 - 71804 1396 ## COG0531 Amino acid transporters - Prom 71953 - 72012 2.7 + Prom 72109 - 72168 6.1 59 32 Tu 1 . + CDS 72188 - 72542 200 ## Predicted protein(s) >gi|319803968|gb|ADMF01000034.1| GENE 1 3 - 282 307 93 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKKNTRNALDTSLSYAVIGLDLAKADCAVAAVPCADDELGLIDRMDYESLFEQAEKLGP TLFAMEPCCGYSQISLRLQNMGHEVKVISGHAV >gi|319803968|gb|ADMF01000034.1| GENE 2 443 - 2038 1537 531 aa, chain + ## HITS:1 COG:RSc2173 KEGG:ns NR:ns ## COG: RSc2173 COG3845 # Protein_GI_number: 17546892 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Ralstonia solanacearum # 35 518 1 492 508 479 54.0 1e-135 MTEIMGASVQLSSHSAAFEAPDHIGMTPRLSLRNITKRYPGITANDHVSLDIAPGEVLAI LGENGAGKSTLMKIIYGAARPDEGEISFDGHPLGVETPAQARELGIAMVHQHFALFDTLS VTENVALGLSTGISAAEIEREIRSLGEKYGLEVDPASVVMELSMGERQRVEILRALMTKP KLLILDEPTSVLTPQAVRKLFKTLHQLSSEGVSILFISHKLDEIRELADRCVVLRAGKVV ASVDPKAESEENLARLMIGNDPPTVREGTAKAGEVVFEMRHVSAPGSTRVCGIEDVSLAV RAGEIVGIAGISGNGQARFMAAASGEYLCEADRVLLFNSPVGELDTHARRISGLRYVPEQ RLGHAAVPELSLTANTYLTGDSLVRSGFILRDRARSFANLVIERFHVKTPNAEKAAGSLS GGNLQKFIMGREILNRPRVLLVHQPTWGVDVGAAAVIRNSLIRLRDDGAAIIVVSEEIDE LFEISDRIAVMYRGALSPAVPKTTISIEEVGRWMSGLWPDSPFTQKTSEAH >gi|319803968|gb|ADMF01000034.1| GENE 3 2041 - 3135 1296 364 aa, chain + ## HITS:1 COG:RSc2174 KEGG:ns NR:ns ## COG: RSc2174 COG4603 # Protein_GI_number: 17546893 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Ralstonia solanacearum # 2 354 10 367 369 325 54.0 9e-89 MLQFPIAMTPRTEPARALAWLSPVIAFALTVFTGFCLFAALGQDPVKALGVFFIAPLDSL RGWTEIAVKMTPLLLCAAGLVVCFKANVWNIGAEGQLIAGAITGGVVALACDPSWGRWYV VLVMLASAVGGAVWGGFTALLRHRFHANEILVSLMLVYVAQFLLAWCVQGPMRDPMGFGF PQTKLFEAGAMLPVLEGTRLHAGALLALFSAVGVWLLMDRMALGFQFKVSGMAPFAARYA GYHPGKLIWASMLICGALAGLAGGIEASGPLGQLTPTISPGYGFAAIIVAFVGRLSPLGC IPAAFVMALFYLGGELAQSRLGLPSSITGVYQGLLLFFILACDTMIFYRLSWRGLSADAG KEVR >gi|319803968|gb|ADMF01000034.1| GENE 4 3136 - 4056 1191 306 aa, chain + ## HITS:1 COG:RSc2175 KEGG:ns NR:ns ## COG: RSc2175 COG1079 # Protein_GI_number: 17546894 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Ralstonia solanacearum # 1 304 1 303 306 295 60.0 8e-80 MSIAASIIASTLNAGTPLLIAAAGIVIHEKSGVLNLGIEGIMLMGAVTGFTVTLSTGSFA LGFLAGAGVGILLGLLFAFFTLGMHANQYAAGLALSLFGAGLSAFIGKPLQGQALAERSV SGIPGLENIPFFGEAFFSQHILVYGAWVLIAAVWYFLFRTRAGLVLRAVGESPQSAFALG YPVLRIRLFAVLFGALCSGVAGAYLSLVYTPLWVEGMTAGRGWIALALVTFATWRPLRVV VGAYLFGGVTMLQFAFQGMGISISPQFMAMTPYLATILVLVLISRNPAWIRLNVPASLGK PFSPKG >gi|319803968|gb|ADMF01000034.1| GENE 5 4150 - 5286 1570 378 aa, chain + ## HITS:1 COG:BMEII0702 KEGG:ns NR:ns ## COG: BMEII0702 COG1744 # Protein_GI_number: 17989047 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Brucella melitensis # 42 375 28 362 363 319 47.0 6e-87 MNKRFAFKLAFAGAAALALTACGEKTEPPKAAEPAKTAAAPAAAKEPLKVAFMYVSPANE EGWSTQHDIARRAVEAKFGDKIKVTTVENIPENADAERVLRDLAQQGNKLIFATSFGYMN SVLKVAKEFPDVKFEHATGYKTAPNVANYSARFYEARYLAGKLAGATTKSNILGYVAALP IPEVLQGINAYTLGAQSVNPNIEVRVVWTSAWYDPGKESDAAKSLIGQGADVITHHTNSS AVASACEEAKIPVISYNTSMKRAAPTMLIGGVIHIWDEFYAGRIQAVMDGTWQPQSIWGG APEHMIDLVDIKATDAVKADIKAAYDKMAAREFHPFTGPVFDNTGRQVLAEGQKATDADL LTMNWLAKGVAGKLPSGS >gi|319803968|gb|ADMF01000034.1| GENE 6 5407 - 6555 1483 382 aa, chain + ## HITS:1 COG:BMEII0702 KEGG:ns NR:ns ## COG: BMEII0702 COG1744 # Protein_GI_number: 17989047 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Brucella melitensis # 43 379 27 362 363 322 47.0 7e-88 MQKRTALKLVLAGAAAAMLAGCGDKTEAPKEAAAPEKAAAAPADKAAGPYKVAFVYVSPA SEEGWSRQHDLARIALEKVYGDKVKFTTVENIPAGADSERVLRDLAQQGNKLIFATSFGY MNSVLKVAKEFPDVKFEHATGYKTAPNVANYSARFYEARYLAGKLAGAMTKTNVLGYVAA VPIPEVLQGINAYTLGAQSVNPNVEVRVVWTSAWYDPGKESDAAKTLVGQKADVLTHHTD SPAVVAAGEDMKVPVISYNTSMKRIAPTMLLGGVVQSWEEFYTGRINAAMDGTWKSQSIW GGIPEHMVNLVDIRSDAPQSVQDDIQAAYNKMAAREFSPFTGPIVTNEGQTVVEAGKTAP DDVLLNMNWLVKGVVGKVPTMN >gi|319803968|gb|ADMF01000034.1| GENE 7 6932 - 8983 350 683 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 32 587 33 570 618 139 25 4e-32 MQNYSLITSLVTGFGLALPFGYLAERFLRSPALVGYILAGVAVGIIPGLPPVNEAMIEQL AEIGVMLLMFGVGLHFSVRDLLNVRTAVVPWAAVQMMVTAILGACVAMGFWHWSFGAAVL FGLTISCASTVVVTKALELRRMTNEINGQVAIGWLVMEDLMSVVLLVCLPPFAQAVQGAD VSLSAVAWKVATTLIWAAVFVVLMLVAGRKVMPRLLREVALTGSNELFTLSVLGCAIVIA YGAGAIFNVSFALGAFFAGMVMQESRYAHRAATDSLPLQDAFSVLFFVSVGMMLDWHVFL QHPIEITLVVLIIIICKMTFATTFVTIARWPLETAFTVGACNGQIGEFSYILAAQGIALH LVDSSMMSIIVAASIITIAFNPVLFEAAPKLMRIFTSRYAWARRAAMRPAPFSQLPENAP REILDGQMIVVGLPEDGAQAFFDSLLKAKRRTIVICGGSAPVDRLREAGIGVLFGSPSDP MVLVQAHVLSAGVLVIPSGTAAEAKDVVDAARKLNKTLPIVVLTKTIDDGVFFDQTDKNL KILCEPLVTSLTVAATAIEELFQREESEAEEEANRKTVREIINEEYMRTVAAVRTGGASD AAESQSDKLQAAAVTVADEAMSEAKRQTPAQKTLREAARGWGRRAASVFFWRKRGSDHSG DAEPADEAKPDTAEQTAQTSPKA >gi|319803968|gb|ADMF01000034.1| GENE 8 9084 - 10523 305 479 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739394|ref|ZP_02146805.1| 50S ribosomal protein L36 [Phaeobacter gallaeciensis BS107] # 102 448 32 378 409 122 26 7e-27 MPTEHTLLLALFGLLALTVGLLALLIYLVLSDRHRRGAEGDDLCDALLEGVAGAKREIEG TVAKTDARLSAGLSSLITYSTTEQKRSSESVERFAASARGDLARMNETLAKEFLALQSMV DERFAKVLQTNAGAQEALGAKLSAALAEVRGTVDASLEKVRAENAQKLEAMRATVEEKLD RTLSERLSASFRMVDEKLGLVQSGLGEMRRMAQSVSRLQNVLANVKTRGTFGEVRLAAIL SEILTPAQYAAQVRLDPKSAEAVDFAVRLPGRADDAPCWLPIDSKFPLEDWELLENAERE GNASAAAEARKGLERAVLKQAKSIREKYVRPPVTTEFAVMFLPSEGLYAEVLRSPGLFER LQREFRITPAGPTVIAALLNSLLMGFMTLAMEKRSSEVWKILAEVKTDFAVFSRQFETVE KKFREAQSSLEQMSVKSRRMGARMQAIDALADGEDASADVVPKLDEGEAASAKCVNDAF >gi|319803968|gb|ADMF01000034.1| GENE 9 10607 - 11263 788 218 aa, chain + ## HITS:1 COG:RSc1142 KEGG:ns NR:ns ## COG: RSc1142 COG1994 # Protein_GI_number: 17545861 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Ralstonia solanacearum # 8 205 6 200 225 146 42.0 2e-35 MDSFYHAIQTICVYAIPLIFAITLHESAHGWAAGRLGDPTATMLGRVTINPIPHIDPIGT IAVPGALLLMSALTGGGGLLFGWAKPVPINPRYFRNPLKAMTITAAAGPLSNLLQMIFWA LLLKALAAVGFYDKFVISVCAAGISVNLMLMAFNLIPIPPLDGGRIVRGLLPRQAGMAFD KIEPYGFMILLVLMVGGGLSFFVRPFLMFGQWIINLVL >gi|319803968|gb|ADMF01000034.1| GENE 10 11287 - 11859 528 190 aa, chain + ## HITS:1 COG:RSc1144 KEGG:ns NR:ns ## COG: RSc1144 COG0500 # Protein_GI_number: 17545863 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Ralstonia solanacearum # 9 164 11 164 190 103 39.0 3e-22 MTICRNPKNCMALPSAWVLRFIDELPPHAKVLDVACGEGRHTSLCLLRGFDVIAVDVDVS HLEPLVGTPGLTLECRDLEAEPWPYAEEAFDAIIVTNYLYRAHFPHYWRSLKSGGLFLME TFTTVNTAIWGRPRSPEHVLQPGELLRLAPPEARICAYEEGLNADELGLERIVWLKPGDA EVLALRLGAR >gi|319803968|gb|ADMF01000034.1| GENE 11 12089 - 13264 1435 391 aa, chain + ## HITS:1 COG:RSc1146 KEGG:ns NR:ns ## COG: RSc1146 COG3317 # Protein_GI_number: 17545865 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized lipoprotein # Organism: Ralstonia solanacearum # 18 391 27 398 398 246 37.0 5e-65 MSLRAFRLAAACAAIASLSGCTFLGIDFNDEKVQYESSNSRANLEVPPDLTPIQNDNRFA VPSRNGVVSANAEAQRAQAASGQDPSAASSRIVPLTVSAKVMKDGQDRWLRVNAAPEKLW PVVQDFWPSVGLVVREQNPKTGYMETEWAENRAKLPQDIIRRTVGKIIDFAYSTGEQDQY RVRLERNDDDTTDIYISHRSMVEVMTGRDNESSVWQPGPTDPTMEAEMLQRLALRIDAEF NPEASGQEQEANAQQIAKDLEIKPVAPKAAIENGSDGKAAAVVLDEGFDQAWRRLGLVID RMGFELVDRDRTAGWYLVRYLDPAYEAKVKESRGFFANVFGSDEAIEAPTYRLHLGDEGA KTRLTVQDAEGGEDKTGVAPNILSLLAEQLR >gi|319803968|gb|ADMF01000034.1| GENE 12 13277 - 13594 254 105 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNFFVKCLNAVGLHTEAELAAARRKGAIESGAQPTAPVVPNSPAALDHSPAGVLYRRTAE DLAVMPVSLQVQVKAQTVVKLQKMVERSLLTQEEFEIWKRRIMML >gi|319803968|gb|ADMF01000034.1| GENE 13 13567 - 14127 428 186 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAPHHDALTHQALRGIALMSTESIQPNCSNNAAWNDPSAGMGLRLLALLGSVVLTLFNP QVRIDRRGFAIGLVGWLLAAAAAYALMDPIADAAWISDSAILVIAKIYGWAAGLWSIGVT VLCARRAHDFGLSGAWALLLSAAGVNILFLLACLCLPGRPEGLAWPRADDAAELFHGTHQ TVCRNE >gi|319803968|gb|ADMF01000034.1| GENE 14 14200 - 14835 835 211 aa, chain + ## HITS:1 COG:RSc1149 KEGG:ns NR:ns ## COG: RSc1149 COG1047 # Protein_GI_number: 17545868 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 2 # Organism: Ralstonia solanacearum # 5 182 3 170 174 97 39.0 2e-20 MADAIRKGMLVTISLVMADMTGRTLEETPPEGMVYLHGEGDIFPRLEKALEGHFAGEGFT IHLEPEEAFGEYDADAIRCIPVENFAHPERLEVGELVDEVPGEAPDGRSWRVTDMADGMA VLEANHPLAGVGLQFAVKVLDVHEPSEAELESMEDDGSASLVPPFLRLADKIVSEDDDDD TPYEAADGESADPYSDGSSMAKLAKPPRIVR >gi|319803968|gb|ADMF01000034.1| GENE 15 15388 - 17529 2143 713 aa, chain + ## HITS:1 COG:VC0200 KEGG:ns NR:ns ## COG: VC0200 COG1629 # Protein_GI_number: 15640230 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Vibrio cholerae # 35 713 48 718 718 424 37.0 1e-118 MNTRKPLSCISTKRLARKRLAIALSLVFSGLGTLALSQTAAAADDYQTIDGVGVTAQALK IDVSLQDTPQSVNIVTREHLDNTVATKIDDSLRYTPGFWNSFGPDFDTNWITIRGFDSSV LVDGKRQYKDGYFATIVEPFALESIEVVQGPSSALYGNSQPGGVINMVTKKPTKTPLHQV SVSGGSNDYVQGGIDISDKINEDGSHRYRVVAMGSRSDGVLDGVDGWRAYIAPSYTIDIS PNTSLTLTASYLKDRRVNNSAFFSTYGTLIPVNGKYVSRHTNYGDPEHDKQDTSQFTLGW DFSHKFNDAWTYKNSFTFMHQDFYMRNTAAYNAWEGSVLLTDKLQRYSILNDGKTISFSF DNNLTGQFETGDFANIVQLGFDYNQSKNDFVGTPSSGQSVGGLIDIFNPTYGGLPDDSGL TLFNNNLSQKQLGIYAQAQTTWNETIVAKIGGRYDRMKIENDTEYTNAVSPHQSLDKGNF SWNAGLMYLSSIGVSPYVNYSESFYAAASLANTSDWKLILSDPIESKQWEAGVKFTPEWL DGYINLAYFDLKQKNALSQTMVGGTLATAVTPEKETRGVEIEAHAALTKSLSTDLTYTYM SATYGDQNTRADYMPHNIATAWVNYDFTSLGVTGLTLGTGVRYRGTSINTATKDKVDDVL LWDAAASWKIDNHWKLNGTISNITDKVFISGAYGNIAYYGEGRLMKATVTYSW >gi|319803968|gb|ADMF01000034.1| GENE 16 17659 - 18462 194 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 223 1 224 245 79 25 5e-14 MYELNGIRMVRNDRAILSIDHLEIPTHELTLILGHNGSGKSTLASIISGLVKPDAGTTKL EGCDLFTLSERERAQRAAFLPQKLPASEGLTCRELVRLGRFPWRGLFGRWRAEDEAAVDE ALAATGTAQYAQSYVDDLSGGERQRVWISMLLAQASPVMILDEPTSALDVRHQYGTLALL ERLNRETGRGVIAIIHDINLALRFATHIVALKEGKVLFSGGAELLHSEENLRTLFEAPVK LMLHPDPPAAYTGGKKQLPLDVAVVCE >gi|319803968|gb|ADMF01000034.1| GENE 17 18504 - 19475 795 323 aa, chain + ## HITS:1 COG:VC0202 KEGG:ns NR:ns ## COG: VC0202 COG0614 # Protein_GI_number: 15640232 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Vibrio cholerae # 30 310 38 317 319 229 41.0 4e-60 MLKHFAAGSLGAASLPNFASNEKLAAVSGITIRDDLGEHVFQTIPQRPAVLQWDLLENLV GLGVKPAGACDISSWDTWVREPALPAGIEDLGTRAEPNLERIAKLKPDVILIGPTQLDLM PVLATIAPVLLFSNYRADAPENEAETALKQFRGLAKLFQREAAAEAEIARWFAQIDAYGD AIRKAFGFAPQIQVIRFSSLTTLFVYTPNSIADWVVRRMGMAQPLTRPASAYGLTQVRIR DLKNLTDAYVIYIRPFAQEAKVMNSILWCATPFARKHHVAPAEPYWSHGGAPSILTTAKR ITEALLTLAPSYAGRTEQEGTSK >gi|319803968|gb|ADMF01000034.1| GENE 18 19472 - 21469 2100 665 aa, chain + ## HITS:1 COG:VC0203 KEGG:ns NR:ns ## COG: VC0203 COG0609 # Protein_GI_number: 15640233 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Vibrio cholerae # 30 664 27 651 653 417 50.0 1e-116 MKSFSIGALIAAAAALGLSIFCTFTLDNALSWTDRVNLIFDPASAESFDAYYFAFGTLPR FAAAAIGGALLGLVGSLLQQLTQNPMTSPLTLGTSSGGWLAVVLISAFFPAAAGAWLSLG AFAGALAAFGLILLIAGPRGMTGVALIIAGMVVNLLFGAIATAVVLLRAQFVENVFLWGA GDLAQNGWGGITALLPQTVPVVILLLIFAPRALALISLGDEGARARGLPIVPVFGVLAAL GIWLSSAFIAAAGVINFTGLIAPNIARRVGFVNPRTQLCASMLIGAALLCATDAAAQGLT SLTGNIVPTGVVSAIIGTPIFIWIARKSLSALARGGAQPGQASGMVRSSLKKLSIPGLIM LAAAMLLLIVLNFTFINREGIWTFALADKFELLLRIPRFITAAAAGAGLAAAGVILQRLI RNPLASPDILGVSSGAAFAMVVSALYFGGAVGSLGSLTAAGGSFVVLLVLLGLSKSSRFS PDVVVLMGIAISAFLDSAVTLALSRGTMENYFILQWLSGSTYRTTPLAAAMLLGAVLVLI SIAFAASRSMTLLSISRDFAQSRGLSLTRSALGLLTLCALLCASATAAMGPVAFVGLVAP HMAVMIGARTVKTELCTAALLGAALVSWADWLGQVLIAPAQIPAGTLASIIGAGYFLILL VVSRR >gi|319803968|gb|ADMF01000034.1| GENE 19 21517 - 22104 471 195 aa, chain - ## HITS:1 COG:slr0895 KEGG:ns NR:ns ## COG: slr0895 COG1309 # Protein_GI_number: 16331647 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 1 161 1 162 187 63 28.0 2e-10 MASDKAIKTRQSILDAAKAIIIEEGIGALTMERAATKAGISKGACMYHFKSKRALQAALV EEYAAHLSSELARHEALFDGPPEETLVPGFIEWFRSFDHDNHGWSTVGLAIHSNFVHDEE LMRPVKLWYERLHARIAALPEDVRTPALVAIMAIEGFFYSHKFEVDLVSPKLKIQAWHFI LENLVHNHAAAQTKH >gi|319803968|gb|ADMF01000034.1| GENE 20 22265 - 24031 2388 588 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 91 588 1 481 484 280 40.0 5e-75 MQFQKNLITIAAALAFGAASTTLFATPITTEGVGVGKHGDIRVAVTFDNGKIQKIDILKN AENPVLSKKVFTDLKDQVAAASSVQVDIVSGATFTSKGMLDAIEDAAKKAGVTLGKADKN TLNVIVKDLPKNASYDVVVIGAGGAGFSAAIEAKNAGANVVLLEKMPQVGGNSLISGAEM NVARNWVQPKLGITDDSPELHAKDTYLGGDKKGDMNVINVMTRNALAGAEWCRDYLGIRF EPDNLFFFGGHSRKRALIPVGHTGTEFITKFLAKADELGIPVITNMKAEELLKDKAGRVV GVKATMNGTEYTFNAKGGVVLATGGFGANPAMVKKYNPKIDERFKTTDAPGTTGEVLYMA QRAGAELVNMQYIQTYPICDPISGVIELIADARFDGAIMLNQEGKRFVEELGRRDVLSEA ILDQTGGYCWVLWNDKIGAVSNTVKEHPTEYDAFTKQGIMTTCPDLKCIADFTKIPYDSL KGTVDRVTSMAGKGNDKDFHHRAGLVDMSQGQYYVIKAVPSVHHTMGGVRINEKAQALTA DGKVIPGLWAAGEVTGVTHGTNRLGGNAYTDIIVFGRIAGKAAAEAAK >gi|319803968|gb|ADMF01000034.1| GENE 21 24263 - 24538 198 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMVFIKTEACSEIVNFNALTGMQESVRLRRDDDRFAVNGRIGGSKHDGKTSGDCKSIKTH FEIVRLILTAARGNQISPQGESVSIEMKFNS >gi|319803968|gb|ADMF01000034.1| GENE 22 24359 - 24730 123 123 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRLNALAVTAGFAVMFASAYPAVNGEAVIIAPEAHGFLHARQGVEIYDLTAGFSLNKDHH QMLFVDKDRIFSGDLEEGINRTAAGVPFLRNRGGFESGSRRREDLQIKKLRPSGRKVITK TFS >gi|319803968|gb|ADMF01000034.1| GENE 23 25009 - 25653 387 214 aa, chain + ## HITS:1 COG:lin1442 KEGG:ns NR:ns ## COG: lin1442 COG1954 # Protein_GI_number: 16800510 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Listeria innocua # 32 204 10 182 182 115 32.0 6e-26 MTHCAQAGTLSPRTTEPPVVHKELAEVLANPVIAVVRSAEELAEALTSRVSAIEIRSGDL ASLPALIDRVRAARKSVLLYPELIAGLGRDPAAIDFLCGYARPTAIVSTKKQILQKARAC GLITIFQIFMIDTQAFETGIQTARRLDCDAVEIMPGAIPHIIREVSSQLPLPVLCAGLVK TEAEIHEVLKAGAQAVATSRRPLWFASSLREVAA >gi|319803968|gb|ADMF01000034.1| GENE 24 25650 - 26825 466 391 aa, chain + ## HITS:1 COG:AGl3324 KEGG:ns NR:ns ## COG: AGl3324 COG3839 # Protein_GI_number: 15891781 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 378 2 361 361 281 43.0 1e-75 MTAALELQGITKSYDTVQVLQKINLTVEEGEFICLLGPSGCGKTTLLRIIAGLLDPTDGD IVIRGRKVTALSPSERNIAMVFQSYALYPHKTVWENIAFPLRMRAPASTKIPFLGRFLPA GKKLTAELSRQVPQAAAMVGLQKLLARRPSELSGGQKQRVALARALVRDPSLFLMDEPLS NLDAKLRTDTRREIVELHKVTKRTFIYVTHDQTEAMTMAGRIVLLNGGRVEQVGAPLTLY DDPDTLFTASFIGTPTINQLPLEVSDSKARLLGQLSQSALLLKAMPLLGAGHFTAALRPE ALHPAAAEDPEAIPVEPDFIEEMGAESIAWFWAGERETHRQIAVRLSREHARDFTAIQAL RPDWSRAFIFDENGRRIRLSSLSALLQEAPL >gi|319803968|gb|ADMF01000034.1| GENE 25 26822 - 27733 1056 303 aa, chain + ## HITS:1 COG:mll1715 KEGG:ns NR:ns ## COG: mll1715 COG1175 # Protein_GI_number: 13471670 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Mesorhizobium loti # 19 300 27 306 307 215 45.0 8e-56 MKKAWLSFFSGEAWVANPLMLSPAMGCLLIFFIFPMIATVVVSFTDWELGGTNSVHFIGW DNYIGLWESDDFRKSVGNTLFMTMLVVPTSFVLSLLLALAVHASGRLAQFWQSIYFLPVT ASLVAMAVVWQWILHPEVGIVAAVLPYFGITQKVNFLNDARFVLWTLSFITVWQMTGYFM VIFLTGLVQIPQDLYEAARVDGAKSTWSLFANITWPLLSATSFFVLILTIIKTFQVFDIV KVLTRGGPEKASEILLYTMYQEGFSFFRMGTAAAVAAIYLAVMLLLTWANNAVIGRRVHY GFE >gi|319803968|gb|ADMF01000034.1| GENE 26 27720 - 28547 621 275 aa, chain + ## HITS:1 COG:AGc688 KEGG:ns NR:ns ## COG: AGc688 COG0395 # Protein_GI_number: 15887742 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 275 3 273 273 213 43.0 3e-55 MASNKLWRSIALNVLLALGAVVVLLPFVWMLSLSVKPENEIYTPTIHFLPHAWDWANYAE AFEFGEVGTFIRNGIIVTGAILCIQLLTVIPCAYVLARKRFRLEGLAFGLVLTGLIVPPQ VVVIPLVLMIGRLGLLNTYTALIIPFMTSALGIFLIRQSLKAVPQDLIDAARVDGANETT ILWTILVPQVKPAIAAFAVFSIVSHWNDFLWPLLVVNDMSLATPPLGVSIFASDEGGNDV GPMMASATMIVLPLLLIFLFARRWFIQGVTMSGLK >gi|319803968|gb|ADMF01000034.1| GENE 27 28557 - 29465 334 302 aa, chain + ## HITS:1 COG:mll3631 KEGG:ns NR:ns ## COG: mll3631 COG1409 # Protein_GI_number: 13473133 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Mesorhizobium loti # 1 282 48 304 305 97 28.0 3e-20 MRFAVISDLHVRIDGLLYGLDTQKRLDDVLSDIDREAPDLVVVTGDLADCADLGSYRLIK ERLESLSRPVYVLPGNHDDPVQMRQIFPAAPAVSVFSPGAYFTDAVETDEAILVFLTTTI PNTVAGRVSPEALQQIRHMRRKAICSQRALLVFLHHPPFRSGYIGMDACALENRREFLTA FGNVSPTGKTPSQKGSEVTAGIFCGHLHRPMASLVEGLPCWTVPSVAHSLAAFERSGAVR AAATPPGWLRGTLTKDSLVCEFVEISAQPVFPIPFIPLRARVEEQALKVLSPANDHMSLR KD >gi|319803968|gb|ADMF01000034.1| GENE 28 29471 - 30754 1312 427 aa, chain + ## HITS:1 COG:mll1712 KEGG:ns NR:ns ## COG: mll1712 COG1653 # Protein_GI_number: 13471668 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 37 426 27 418 421 239 37.0 9e-63 MNSLSRKHFLRLALAVAAVAAAGSAPNVFAAEDVVEITVAHPYGKIFRPIHQKIIKEFNK IHPNVKVRLETPFPDYEELTQRTLAGIAQGNAPVLSFQGINQIRQYIEMGAAYDLSEFVK NDPRWKDGSGYYPTMMKLGNFNGKQYAVPFAISTPIVYFNETLLKKAGIDTSKGFETWPA LIEAAKKVQALGPEYSGLFYDYQATGNWMWQALLFCEGGTMMDEKETRVTFADEPGLRAA RILRSFVDQGVMKDWTRLQGEQAFISGRVGFYAASTSWLKGVQDKTSGFAMKTSLFPVGT TGKRILPNGGNGAMIITKDPKKARAAYEYAMFAAGPVGTAIQVQGSGYMPMHEKGTEALK DFYNANPNFKTSLAQIPTIVRWYSFPGTNTLKIIDVIKDDLQAIVNKRVTADEGIKAAAD EVSKLVK >gi|319803968|gb|ADMF01000034.1| GENE 29 30884 - 31645 407 253 aa, chain + ## HITS:1 COG:lin2500 KEGG:ns NR:ns ## COG: lin2500 COG0647 # Protein_GI_number: 16801562 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Listeria innocua # 27 242 10 228 255 78 28.0 1e-14 MRSAIYQSHGLTSAKAVLAQARFVISDIDGVLFDPTGCPVVGAAKLFASRPCALVSNNST LTAKTIAKRFADGGAYISQERIFLAGEYAVGIALKRFGSAPMLWLASDEIGELAEKMLNE ARSVGETAGILICRDRTLTMEHLERIVNAVRCGAEVILANPDFTHPEGENVRMETGAIWS AVSCQLETACSPVLVGKPETLLAEEALRMLGANRREVVFLGDNPDTDGLTAQRLGVNFIH TGGRNGFPLAALM >gi|319803968|gb|ADMF01000034.1| GENE 30 31674 - 32942 721 422 aa, chain - ## HITS:1 COG:PA4380 KEGG:ns NR:ns ## COG: PA4380 COG0642 # Protein_GI_number: 15599576 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 14 420 6 423 426 182 32.0 1e-45 MDFSHLRHRFRHASLGARVIAGLTILTISIAAVYSVTLWWSFTWVKNYVAADLMNSQLTA KIQALENGVAPQTNPGVTLYGTRPDVKPIPQAWELFSPGLHEIELERPYFLYIADRGANT YALLKQQGCFKRAETAYFHLIGTVALLVALGAFGGGWLLYRSIMSPIRRLADNVIHASSA DQYLPISTPHNQDEVTVLARSCDIALERLYTALEREKRFTGDVTHELKTPIQTLTGSLEL LTRSPLTDRQRAQAERAQRALKDMQVLVDTFLQISREAELIGSVTPDTLTRMIRHLEEIW RPQAEAKGLQLQVIQEAVCTGFYSPILLGVVLNNLLRNAVTYTASGTVQIFETAHGFVVE DEAGGISPERIAAIFSAPRRFVDADNNGIGLSLVRRICARCGWALRHENTLHGSRFSVVL TA >gi|319803968|gb|ADMF01000034.1| GENE 31 32965 - 33639 456 224 aa, chain - ## HITS:1 COG:PA4381 KEGG:ns NR:ns ## COG: PA4381 COG0745 # Protein_GI_number: 15599577 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 3 220 1 221 227 177 42.0 1e-44 MTVRLLIIDDDPDHCANLSDFCEDLGWRAQTACSAHEAEYFLHKEAFSLIALDVTMPGMD GVTFCRRLRERGVKIPILMLTANNSVAERIDGLRAGADDYLGKPFSFNEFEARVSAILRR TAPEKLMVEDLVYDLSTHRATRAGNPLKIKGIAQRILEELMKASPEIVDREHLTAAIWPD DDVPDADSLRANIYLLRQAVDKPFATALIRTHTGAGWSIGRSQR >gi|319803968|gb|ADMF01000034.1| GENE 32 34145 - 35026 638 293 aa, chain + ## HITS:1 COG:no KEGG:Slit_2497 NR:ns ## KEGG: Slit_2497 # Name: not_defined # Def: decaheme C-type cytochrome, DmsE family # Organism: S.lithotrophicus # Pathway: not_defined # 23 288 57 350 355 186 39.0 8e-46 MHRALQKVLLPLGLFVCAAPLWAAQTADEGLTKSVPCAACHQDLTKNYFMSRHGVTADSR TPGKNCSTCHGETLRHMSNPMKEKPQFTFKKDVNGFMSEENLKASNAVCTSCHKGGEQKH WAHSAHENAQVGCVSCHSNHKADVALNDRTSTALCISCHAEQKADLFKTTAHPLLSGQMN CVSCHNPHGSQPGDEAMTKKGNTNDTCYSCHPGKRGPFLHGHQPVTEDCGNCHNPHGSNK GAMLKMSDPMLCKSCHAASHHSPTDTVNAARGCLNCHPQVHGSNHIDGRKFEN >gi|319803968|gb|ADMF01000034.1| GENE 33 35042 - 36955 1682 637 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNAMHFKAARLALALAGALSTVGASAFDQIPLTLDEAQSAAEADRANAIRMGGEVSAANG SSTAAAKSWNGYGKAEGGADVDVNLSGGTAAEGWRLSGDNLGSPIPRLRAEYQKAGKYAL EGEAKRLRHVVAEDANVKDGKSDLETIRDVYRVGARWLPADNVDTRIAYRADHRQGTSSV LLKRNTYNRAYELDDTHHQAAASIEYIGSGWRASSGYELSKFENDAGPLLYFVNNAQGQP TIAGRAIDPSNTLHRVNADASFDIGQTSRLDVAAGYAWSQLDDAVLDSSTGLSAAGYNVK ARVPSFNVALTSSPLPQLKLDLDYGFRRYDKSVDTASAIITTDQDYSENKFSANAVYSFG GGYSARVYGKYLDRDDEQVVENVRTYTGGMALRKRMSNTLSGSLALEVSGQSAKNYIDAE DVTRESTPWDRLGYDQTAFKLNLTSSLIDSVTVSLLGSWYLKSFDAPENPTVTYAMTSAH GTTAGVDVDWAPSRDWNHFGFYAFDRMKAEIDANGGDLNDTMTSHTVGAGFGLHPVNAPW TFAMRYVYGFDKDKNAAKGLMDWKNEYKSHYAQADFGWKLTQQWKLEGAALFGKVDSNDI RHLGSDAPSGSELTSGLYASPNYTACAFYVGATYYLP >gi|319803968|gb|ADMF01000034.1| GENE 34 37700 - 39268 2100 522 aa, chain + ## HITS:1 COG:mlr6288 KEGG:ns NR:ns ## COG: mlr6288 COG0747 # Protein_GI_number: 13475260 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mesorhizobium loti # 9 521 17 528 531 348 37.0 2e-95 MALCCKKTLAALTAALMLAAPAWAETVLKVVPHADLKVLDPVWTTAFVTRHHGYMIYDTL FGLTQKGEIKPQLVDTYTASPDNLHYSFTLREGLKFSDGTPLTTKDVIASIKRWGARDNL GAKLLAAAEKLEAKDDRTFTLDFKKPFGMVLDAFSKPSSIPLFVMPEKVAQTDPFKQITD MTGSGPYMFAADRYRPGEKVVYLKNPYYVPRNEPADGTAGGKHVYVDELDWVILRDAQTV ANAIEKGEVDVVEMVPNEQYSVLKKNPDIQLLNQTGKQSAMLHLNHAIPPFNNPKIAQAA LMAINQAALQRAQIVHKELWNTCTSIYPCGSLYASDKTDYFTGKPQFKRAQELLKEAGYD GTPVVLMLPADMPSLNKYPPVMAELLRRAGFKVDLQSMDWATLVTRRTKSSPVSEGGWNG FITFWNQADTFNPLFFAPLTGSGLKGWFGWTDDPKLEALKDEFVGTSDLAKRKELAEGIQ LRVMDSGVYGMLGEAKPIIALRKNISGLVEAPISVFWGLKKD >gi|319803968|gb|ADMF01000034.1| GENE 35 39414 - 40349 1311 311 aa, chain + ## HITS:1 COG:AGl3101 KEGG:ns NR:ns ## COG: AGl3101 COG0601 # Protein_GI_number: 15891665 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 310 4 312 313 252 46.0 5e-67 MFILRRFLAFIPVALIVALIVFLMLHLSPGDPVAAIAGDSATAADIARIRAELGLDDPLP EQFVRWCMELIQGDLGRSYFLNRPVADLIADRVGPTLSLAGFTIVLTVLIAVPLGAWAAY RQGGWVDRALMGFSVLGFSIPSFVLGYCFVWLFGLKLNLLPSQGYVRYDESIEGWISHLI LPSLTLCCIYVALIARVTRASVAEMLTEDFIRTARAKGITEMQVLLGHALRNAAVPIVTV VGVGIAILIGGVVVTEIVFAIPGLGSLTIDAVMSRDYPLIQGVTLFFSMLYMFINLLIDL SYTLFDPRIRE >gi|319803968|gb|ADMF01000034.1| GENE 36 40361 - 41245 974 294 aa, chain + ## HITS:1 COG:mlr6290 KEGG:ns NR:ns ## COG: mlr6290 COG1173 # Protein_GI_number: 13475262 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mesorhizobium loti # 22 289 24 277 280 219 44.0 4e-57 MFKNALRKVFANGSVRLGGGVLLLLILMSIFAPWLGTIDPTMLDPGSQNLLPGTTNVFMT LDGDEFEHFFLMGSDSLGRDIWSRTLYGGRVSITLGISVALLAVFFGTVAGLLSGYFRWV DAVMMRVMDGFMSIPAILFAISLIAMFGNALVIVVTAIAIPSIPRIARLVRSVVLSVREE PYVEAAIALDTPVWKILLRHILPNATAPLIVQGTYVCAEAILVEAILSFLGVGMPVEAAT WGNIMAEGRSQFNAYPHMVLLPGIFLVLTILSVNILGDGLRDSLDPKFSKRSDK >gi|319803968|gb|ADMF01000034.1| GENE 37 41242 - 42891 872 549 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 13 536 8 524 563 340 37 1e-92 MTESSLRAQKLPVLEVENLAVSLPPGGDRPNAVEHVSFTVNEGEVTCLIGESGSGKSVIA STVMGLLPKGLAPAEGSVKLLGMDLFRRTPDEIRRLRGAKMAMVFQEPMTALNPVMTCGD QMDELLRAHVPMGPYERRIRILDLFEEVRLPDPPRIFRSYPHQLSGGQRQRIVIAMALLL KPDLLICDEPTTALDVTTQASILKLILELQKKNGTAVLFITHDFGVVSEIADQVVVLELG KQIETGPAKSVLQHPKEPYTQKLINAVPELKPRRRPPVDGNPTLLEAKNVVKTYTLGGFF TGRVKVRALKGVSARLRRGETIGIVGESGSGKSTFARSIARLIDPTSGEVWVNGENVAAA SKRKLHGLRRRLQVVFQDPYRSLDPRMTVGESIVEGPVNFGVPKEEAWKRAQEFMKIVRL SPDALNRYPNQFSGGQRQRISIARALACEPEILICDEAVSALDVSVQADILKLLEEIQVK LGIGILFVTHDLRVASQICDDVIVIRRGECVESGHVQDVFFHPQHEYTKSLIAAAPGTNY PFGRTAHLF >gi|319803968|gb|ADMF01000034.1| GENE 38 42919 - 44091 1216 390 aa, chain + ## HITS:1 COG:AGl2766 KEGG:ns NR:ns ## COG: AGl2766 COG1473 # Protein_GI_number: 15891491 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 388 14 396 399 353 47.0 3e-97 MNKILETLEAEREELADWRHDFHMHPELGLEETRTAGIVAQKLRSWGIEVTEHVGVTGVV GVINGDLGPGRSIGLRCDMDALPITECSSQSWKSTVKGKMHACGHDGHTTMLLAAARYLS QHRNFRGRVVLVFQPAEEGTGGALAMIKDGLFERFPMDEIYGMHNWTDVEPGTFSVKSGA AMAGSDFFTIKLYGKGAHGSAPQLSADAALAASLVTVALQQIVARNVAPLDSAVVSVTKI HTGSAFNIIPQEAELGGCTRFFSSETGSMLRRRIEEVAVSTAAACGVKAEVEFESIYAVL DNVPQLAEAMKKAAAAVVGEAKTQWAANPQMGSEDFSFMLEKVPGAYCFLGGQAPHGATN LHNPSFDFDDRVLPTGAAIWVELAMERLAV >gi|319803968|gb|ADMF01000034.1| GENE 39 44546 - 45067 304 173 aa, chain + ## HITS:1 COG:STM2557_1 KEGG:ns NR:ns ## COG: STM2557_1 COG3710 # Protein_GI_number: 16765877 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Salmonella typhimurium LT2 # 1 149 1 158 183 107 38.0 8e-24 MLGEIWKIGDWSVFPAENTLRRDGSEVKVPPRLMDALIFFARHPDHVISRTELVAHLWNR SVVTDQTVTQNIFELRKALRDGRGRQEAPEYIATVPKRGYQLVVEAELLRTAQTEEPKQD AVSAQGASEAELDPSAQAAAGQAKSQEKRSKFMDFARSFLLDEVELGFKKYPY >gi|319803968|gb|ADMF01000034.1| GENE 40 45061 - 46308 1254 415 aa, chain - ## HITS:1 COG:HI0590 KEGG:ns NR:ns ## COG: HI0590 COG0531 # Protein_GI_number: 16272534 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Haemophilus influenzae # 1 407 21 427 435 335 44.0 1e-91 MMGAGIIMLPAKFAEIGAISMLSWIVTALASGAVAYVFAQCGMLSKKLGGLGGFAEYAFG EPGAFIVNYAYAISLVFGNIAISLAAVSYGLSWFHLPFSSVFACIGCVLLLWIASLLTFR SPYITGRITGIFVWALLLPLITLVVVGGFWFDPALYAANWNPRQIPTLDAVSSGISMTFW AFLGLESACANAESVENPEKNVPKAVICATLLTAFIYIATTNLTAGLVPNAVILQSDAPF AVVYASLFGGTSGAVVSCLLWLGCAGSLVSWQFTMARVFASSAHAGFFPSIFGQMNKHDA AVKGLILLTGVQSLLCLPILSPSTFTIYEQFTDLAVFITLFAFVICMSGSFALATAECTS PKRRETIHTIATAAIVMLLGSLYCLNFDTMKIGTVLVCLSWVYYGILKGRPSANQ >gi|319803968|gb|ADMF01000034.1| GENE 41 46627 - 47973 1474 448 aa, chain - ## HITS:1 COG:VCA1062 KEGG:ns NR:ns ## COG: VCA1062 COG0531 # Protein_GI_number: 15601813 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Vibrio cholerae # 1 425 1 425 439 530 68.0 1e-150 MSGSSSKMSVTQLTLLTALNMMGSGIIMLPTKLAEVGTFSIISWLVTAGGSTALAYAFAK CGMLSRNRGGMGGYAEYAFGKSGSFLANYAYCVSLLIANIAIAISAVGYAVALFGLNTTP FETCLLTIAVLWICTVLNFKGAKITGLISNFTAWGVIIPVAGISVFGWFWFNPDTYTAAW NPHNLPAFDAVSASISMTLWSFLGLESACANSEAVDNPEKNVPKAVLGATLGVAVIYILS TNVAAGIVDNAELVKSTAPFGLVFATMFNGTVGQIVMGLMILSCSGSLLSWQFTIARVFK SSADEGYFPKWFSKVTKDDAPVLGMTIIVSVQTLMSFMTISPSLYRQFNTLVDLAVVTNV MPYLLSMAAVFVMLKAEGVTGSQAKWVKIMAFIGTVYSLYALYAAGFEAMMYGALATFAG WFFYGLAAEKLFKHNHKSNVTLSAAADD >gi|319803968|gb|ADMF01000034.1| GENE 42 48051 - 50240 2682 729 aa, chain - ## HITS:1 COG:STM0701 KEGG:ns NR:ns ## COG: STM0701 COG1982 # Protein_GI_number: 16764071 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Salmonella typhimurium LT2 # 1 724 1 723 732 1089 69.0 0 MRKLYVAATEASRSAFECEREVIDFDNANFTQVSIAVMTADEALAGKLEQIESNAFGIPV VILNEGGKVDPCLIGRAASIIDRKSDDAKLYGRQIDTLAQKYEDTVLPPFFGSLEEYVGN GHAQFDCPGHQGGAFFRRHPAGREFAEFFGENVFRSDLCNADVSMGDLLIHEGAPCLAQQ KAARIYNADKTYFVLNGTSASNKVVLNALLAPGDLVLFDRNNHKSNHHGALLQAGATPIY LETARNAYGFIGGIDEHCFEEHYLRDMIREVRPEKAEAKRPFRLAIIQLGTYDGTIYNAR QVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLGPEDPGIFVTQSVHKQQAGFS QTSQIHKKDSHIKGQSRYCPHKRLNNAFMMHASTSPFYPLFAALDVNAKMHEGMSGQRLW ADCVRVGIEARKLLMKTCKYIKPFVPALIDGKPWGEYPTEEIAHNLRFFEFEPEAKWHNF EGYGDRQYFVDPCKLLLTTPGIDAETGHYADFGVPATILANFLRENAVVPEKCDLNSILF LMTPAEDMAKMEHLITQIARFEEYLDADAPLVDVLPSIYYANEERYHGYTIRRLCQEMHD FYKSRNVKQLQKEMFRRSHFPRRALDPQQAHFEFIRGNAELVPLEQAEGRIAVEGALPYP PGVLCCVPGEVWGNSVLQYFLALEEGINRCPGFAPELQGVYIQKDPDGRKRAYGYVLTKE RTAELGIEG >gi|319803968|gb|ADMF01000034.1| GENE 43 50934 - 52481 1238 515 aa, chain + ## HITS:1 COG:VC1131 KEGG:ns NR:ns ## COG: VC1131 COG1757 # Protein_GI_number: 15641144 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Vibrio cholerae # 4 475 6 497 533 252 35.0 1e-66 MEPFNAGWLSLLPPAAAIVAALISREVISALLVGILTGAVIYTSSTGGGVIIGSLDAVFS MMVATLEFKILIFTSLLGAVVYLVSLSGGSKAYGEWAGRRMKTKRKSLLSACGLGCLVFI DDYFSCLFVGTVMKPLTDRCRVARAKLAWIVDSTAAPVCIIAPVSSWAAAVAASLKSTPL EDQSMAAFMAAIPWNFYAILTIALVVFLIWRGRDFGPMLTAEAEAEKAENLTQDEEQTES TGNGGLLEMIFPIALLLIFSFASLLYSGGFWSDGPTKYQFGAAIGASSSSSALCWAGFGT LAATILLYVPRRVLSFTKCMDGAVNGMKLMLPANIILVLAWTLSGICRDLLMSAQYVEGL VTSFGGDVMQLFPFICFAAACVLSFATGASWATFGILVPILVPIAYAVDPSMVFVVLGAV LAGSVFGDHSSPISDTSVLSAASSGCPVMEHAATQLPYALLTAFAAGAGYLTAGLTNGSL LLSWSTAAAVLSGGLWLTLNQRKAAVRPIATVDEV >gi|319803968|gb|ADMF01000034.1| GENE 44 53028 - 53921 482 297 aa, chain - ## HITS:1 COG:RSc2210 KEGG:ns NR:ns ## COG: RSc2210 COG0008 # Protein_GI_number: 17546929 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Ralstonia solanacearum # 14 294 19 307 315 285 55.0 6e-77 MQTANLSPAPTSIPYRGRFAPSPTGRLHAGSLAAALASWLDARAHGGTWLVRIEDIDPPR DVPGAGEAIIKALARFGMTSDEPILWQHDRLEAYADALAKLTAEGFIYGCACSRKEIQLA DEALGLPIGVYPGTCRHGTQGRPVRALRFRVPADNVRFHDRRLGDYLQNVEKTVGDFVLK RADGLWAYQLAVVVDDLYQGVTDIVRGADLIDNTPRQILLTQALGAAPLRYFHIPLVLND RGEKLSKQAGAAPIDNEEPLLALEAAFEHLGFQRLGADSVSSFLQKAVPLWQERWGR >gi|319803968|gb|ADMF01000034.1| GENE 45 54585 - 55901 1562 438 aa, chain + ## HITS:1 COG:STM2558 KEGG:ns NR:ns ## COG: STM2558 COG0531 # Protein_GI_number: 16765878 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 412 20 431 443 516 68.0 1e-146 MMGSGIALLPSNLASIGSVALFGWLIAMFGALALAYVYARLSTVNPQSGGPVAYAGEISP AFGYQTGVLYYHANWIGNLAIAITAVSYLSVFFPILNHPIPAGIACVAVVWFFTILNFFG GSMIGKVTTFGVIALLIPVVGTATFGWFWFDPQLYMDNWNVSGTTDLDATCRSVLLCLWA FIGIESASVSSGLVDNPRRTVPLATMLGALLAGLVYIGSSQAIAGMFPASVTAASGAPFA LSASLMVGDWAAPVVSAITALACLTSLGSWMMLVTQAGARAAQEGYIPKIYGELDKNGLP RKGLILSATQMTVLMAVITAMNASGGSASDLFGMITGIAVLLTMLPYFYSCVNLLRIEGA TTRNVISCIASVLGSGFCFIALAGAGFNQLIATFIVSLVIMMFFSWKKGKLQATVKTAAA EASDKSEAGKAAVLVGDN >gi|319803968|gb|ADMF01000034.1| GENE 46 56028 - 58163 2648 711 aa, chain + ## HITS:1 COG:ECs5113 KEGG:ns NR:ns ## COG: ECs5113 COG1982 # Protein_GI_number: 15834367 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Escherichia coli O157:H7 # 1 710 1 710 715 1092 70.0 0 MNIIVELVSPGRFFKDAPIHSLNECLKKRGFEVVFAADQADLVRVVENNARLAGVVIDWE DSPQELCQQIHDFNEYLPVFAFSSSNSVTDATFQQLSLNVEFFEYEISNAADIAVTISQK VEEYEKAVTPPLTRALMNFAKEGKYTFCTPGHMSGTAFQHSPVGALFYDFFGANTFKADV SVSVGELGSLLDHSGPHRDAEKYIAETFNADRSYIVTNGTSTANKIIGLYSAPAGSTVLI DRNCHKSLTHLMMMSNVIPIYLRPTRNAYGILGGIPQSEFKHETIEKRVKETPNATWPVH AVVTNSTYDGLFYNTGFIKNTLDVKSIHFDSAWVPYTNFSPIYQGLAGMSGGRTEGKVIY ETQSTHKLLAAFSQASMIHVKGEINEATFNEAFMMHTSTSPFYPIVASTETAAAMMRGNV GHRLIDESIDRAIRFRKEIKRLREESDSWFFDVWQPENIGTKECWELKPEDKWHGFRNID QEHMYLDPIKVTLLTPGLNGDGTMAERGIPASIVSKYLDDRGVIVEKTGPYNLLFLFSFG IDNTKAMGLLRELCNFRRDYDRNLEIKEAIPSLYKKDPSFYDGMRLQELAQGIHKLIVEH DLPNMMFHAFETLPKMVMTPFDAFQRELNGEVEEVRIQDMQDKVNANMILPYPPGVPLVM PGEMLTADNRAVLDFMLMLCEIGEHFPGFETDIHGAYRQPDGSYTVKVLKM >gi|319803968|gb|ADMF01000034.1| GENE 47 58335 - 59852 1532 505 aa, chain + ## HITS:1 COG:RSc1028 KEGG:ns NR:ns ## COG: RSc1028 COG1190 # Protein_GI_number: 17545747 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Ralstonia solanacearum # 10 502 13 509 510 613 60.0 1e-175 MTNENISVTEVQNENSVIAERRAKLLKLREHGVAYPNDFVRKDLFGDLNEKYGNKTAEEL AALAPKVACAGRVMLKRVMGRLTFATVRDYTGTMQYFVQESTVGEAAYADFKTLDLGDIV ACEGTLMRTQAGDLAIKVTSFRLMAKSLRPMPDKHKGLQDQEFCYRRRYVDLMVNAESRE RFIKRSKAIASIRNFMLANDFLEVETPMLHPIPGGANARPFITHHNALNTEMYLRIAPEL YLKRLVVGGFERVFEINRNFRNEGIDARHNPEFTMMEFYATYWTYKDQMEFTEALLRHVA REVTGSAIVTYQGMTINFEEPFDKLTPKQAILKYSPEYTESQLTDEDFLKKEIKRLGADE QIDPTLGSLQMALFDETVEKKLIKPTFIIDYPTEISPLARASDVNPDITERFELFIAGRE TANGFSELNDPDDQAARFRAQVERKGHGDDEAMYYDADYVTALEYGLPPTAGCGIGIDRF MMLLTDAPTIRDVLLFPALRPESKN >gi|319803968|gb|ADMF01000034.1| GENE 48 59967 - 61268 1110 433 aa, chain + ## HITS:1 COG:STM0700 KEGG:ns NR:ns ## COG: STM0700 COG0531 # Protein_GI_number: 16764070 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 1 420 9 427 439 311 41.0 2e-84 MNRTQFMLLTALNMLGSGILMLPAKVAQVGGIGLLSWFVVCLAAVAMAYAFANCGIYSKY RLGGLGAIAENAFGMPGSFLTNYIYAFSVVIANVAIATTAVGYLLGIFGIQADLGVVQCL TIALLWLSTLVNFAGVKAMGRLSAVTIWGILIPLLFLICAAPFSFDAQLFAQNWNPRDLS MQTAVTATAPMMFWAFLGLESACANDDSVDNPEKSVPKAVLAATLAVAVIYVGSTTLTAG LLPESELVDSGAPLFVIFVSLFGSTASRILAVLLFLACVGSLVTWQFTMYRVFMTSARLG YFPALFKRVGKTGVPYLGLFILCFIQTLLVPFMPVSNLFSQFDLLVDISVITNVFPYFLC MAATFVVVRRAGLQGVKKVCVEAAALGSLIFIGWYFSLMDGDVMKFATIVFFLGIAFYGL FVAKDGSTELPEQ >gi|319803968|gb|ADMF01000034.1| GENE 49 61572 - 62249 401 225 aa, chain + ## HITS:1 COG:VC0278_1 KEGG:ns NR:ns ## COG: VC0278_1 COG3710 # Protein_GI_number: 15640307 # Func_class: K Transcription # Function: DNA-binding winged-HTH domains # Organism: Vibrio cholerae # 6 133 28 153 207 112 43.0 7e-25 MESAFFTVADWVANPRSNSIRRKNRRSVLPPRLMDLLFYFAQHPMEVVSRQEIIDNCWDR DVVTDQAITQAIFELRKFLKDGRSAKEAPEYIKTVPKRGYRLLAPVHQLTVEEYIAATSE NGAQGTQVIDDEDVAAERELQQPVSAAEPEHEAATSFESKILEETGTAALEQIPSRSASI KQERRGKVTPFPAQKGGAAKRNIFNKISDALWLDQVTLGFKKGAY >gi|319803968|gb|ADMF01000034.1| GENE 50 62471 - 62605 240 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAMHLIHTIGSIIAAFAEEYLNTFCLGVSRNMRSVSVPFASEQH >gi|319803968|gb|ADMF01000034.1| GENE 51 62978 - 63133 82 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSSILRICGALFDAFAQDFINTFCMGISRDLHEVSAPFPAEDNSTSTRTA >gi|319803968|gb|ADMF01000034.1| GENE 52 63500 - 63694 271 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTGSNFRSIREHLELSVEQLADILRVSAHQIIAWEHGMSQIPSVYADRLFRFDRHGLCFF APRS >gi|319803968|gb|ADMF01000034.1| GENE 53 64129 - 65460 1115 443 aa, chain + ## HITS:1 COG:YPO1267 KEGG:ns NR:ns ## COG: YPO1267 COG0477 # Protein_GI_number: 16121553 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 37 416 14 392 399 134 27.0 3e-31 MSLVKTPADDSKTAAAEDHEVAAATKSGRPTTKDAALLAFVSSIGPFAANAYVPAFDEIG QHYGVGLVTVQQTLSIYLAAFACTSLLIGAASDAFGRKAVLALSMTVFAVSSLGLLFADS MEAFFIWRFVMGMAAAAGPVVTQAIVRDRWSGGDAAKIIALIAVIFGLAPALAPVVGGEL TVHLGWRSIFIFLAVLSAAMAFCSACVLKESLPSERRVSFRPWATLLRYGEVLKVPAFTS GVVAHGFIFLGLIVYSAGAADFVLNVMGLGVDEFGWLMIPMVVAGMTGSWACAHLLAMFG QNRLLFGGVGILAASGLFGVVFDHGPFAVFPWVLLAPVVYNLAAAAVRPALNVMNLDYFP KSRGLAASVQQFFQTGAFAVSSALLIPIVLGEAWKYAAVMLGSGLIALVLLLVVRRTRPA ALAAAEAEEQAEVELRVKPTKLS >gi|319803968|gb|ADMF01000034.1| GENE 54 65625 - 67160 2087 511 aa, chain - ## HITS:1 COG:STM0849 KEGG:ns NR:ns ## COG: STM0849 COG0747 # Protein_GI_number: 16764211 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Salmonella typhimurium LT2 # 13 510 14 511 512 587 59.0 1e-167 MTKTFRMLMLTGALAGAFAVSTGAAAKEITVALASTFTTMDPYDAGDTLSQNSAKSMYEG LFGLDKDMKLKNALATGYEVSKDGLVYTVTLRKGVMFHDGTEFKADAVKANFDRVTNKDN ALRRYTLYMNIAKTEVVDDYTVRITLHTPFSAFINQLAHPAGVMICPKSLEKYPGKQIAF HPCGTGPYILKDYNPSEILHVVKNPNYWQKGLPKLDGIYFKPVPENSTRVAMLRTGEAQF IFPVPPEQAKTLTGSDNLEVTVSPSIIERYVAFNTKTKPFNDVRVRKALNYAVNKEALAK VAFSGYAVPATGSAPEGVDYAKVYEPWPYDPKKARELLKEAGYPNGFTATLWSLYNHTTA QKVIQFLQQQFAQVGVKVSILAMEAGQRNEYLLKKPEDAKLNMLYAGWSSSTGELDWALR PLLATASWAPVAGNYGFYSSKVLDDSFTKALLTTDRAEKTKLYNAGQDAIWNDAPWIFLI NEQNVSAKVKNLKKFYVQPDAGFDYYEAELD >gi|319803968|gb|ADMF01000034.1| GENE 55 67157 - 67456 81 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDYRRRRTDVVRLRLFMCFKGGSFFPRVHAPRHPNSAARQYSAFAEQLLACFAPARAGIP MSLALSLLIIFLQSLPIELGKTPDSMTAAFQIISRVELP >gi|319803968|gb|ADMF01000034.1| GENE 56 67480 - 68649 1061 389 aa, chain - ## HITS:1 COG:SMa1836 KEGG:ns NR:ns ## COG: SMa1836 COG0624 # Protein_GI_number: 16263465 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Sinorhizobium meliloti # 17 369 10 358 374 126 33.0 9e-29 MPQDTLEQRAVLWTQALVRVPSVSGSPACLQVLETARDLIESTGVEADIRILFPEAPNPV LLARTGRGKTGVPELMLSGHVDVVPPAGMEDPWSARIEGDRMHGRGTTDMKSGAACALTT FCEAARQGVDGVLWLILSTDEETAAQGVVRALGCPDAPRPQLCVICEPTGLCVRSAHRGD CWIRVDFTGKSAHSSRPHLGINAIEAAALFIVHAKKRLPELLAENAAAGPASSSIDLVSG GAAENVVPASASVTIDFRYQGVESAQVQCDRIEKILSEVRTDPDFPPVSTSLTVTGDWTA LSTDMTQPLAQAAVAALGESLGHIPETTEMTGWGEGGSMQKFGIPAFYFGPGDGPLAHTP KESVSVSEIKTAVKALFHLVDRLVVHPKL >gi|319803968|gb|ADMF01000034.1| GENE 57 68913 - 70358 1148 481 aa, chain + ## HITS:1 COG:mlr6969 KEGG:ns NR:ns ## COG: mlr6969 COG1012 # Protein_GI_number: 13475798 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Mesorhizobium loti # 10 481 27 496 496 365 44.0 1e-100 MRAANSHFGKHYINGVWTTPKGAMIDVENPATREIFARVPDGTPEEVDAAVAAAQSAFPR WCSTPLAQRIALMEGMLRRFCEKTEDVIELEVAELGAPVAFARSKHCLYQQKRTAAFIAA ARSIAAEEAFPASLVMREPVGVVAAITPWNYPLGQIIQKVVPALLMGCTVVLKPSEWTPL TAVLLIEAFEEAGFPPGVLNLVQGYGETVGEAMTGHAGVDLISFTGSTAVGRRIAGRAAP MMKRLILELGGKSAAVWLPELEGHEAGRMAAKKVLDSLLLNAGQTCTALSRFLVPAEKLQ TAEALLKSVLADYPMGDPTDPATRMGPLISGAQFERVREYISSGIREGARLVAGGLPPEP GANDGWFVPPVVFSDVRPEMRIAQEEIFGPVLSVMPYNTLEEALAIADGTQYGLCGAVFG PHEAAVNFARRMRTGNVYVNDASRDLAAPFGGFKSSGVGREGGVFGLLEFTEPKAIFEHG S >gi|319803968|gb|ADMF01000034.1| GENE 58 70440 - 71804 1396 454 aa, chain - ## HITS:1 COG:STM2558 KEGG:ns NR:ns ## COG: STM2558 COG0531 # Protein_GI_number: 16765878 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 8 438 2 433 443 516 64.0 1e-146 MKPPGHESEKHKLGLIVCIGIVAGNMIEGIALLPANLASIGSISLIGWIIVVIGAMSLAY VYARLSTVNPQSGGPVAYAGEVSTAFGFQSSILYYNANWVGNLAIGVTAVSYLSMFFPAL QDPIPAGLACIAIVWIFTILNFMGGSFIGRMATIGLVAMLLPVAGTAIFGWFWFDPQTYT ANWNTSGAADSEAVIRSVLLCLWAFIGIESASVSTGLVKNPRKTVPLATLLGTGLAGIVY VLSFQAIAGMFPADVIAKSGAPFAASVALMVGDWAAPVVAACTVIACLTSLGSWMLLVTQ AGARAARDGHFPKIYGELDHRGMPRKGLILAASQMTGLMLLITALNAKGGSAASLFEMIT EIAVLLTMLPYFYSCIDLLRIESTSQQGRLSCIAAVLGCGFCFIALAGAGATNLMLTIGV SLVVMMIYSWRMGTVQANRLRFVAQPISSSAAGS >gi|319803968|gb|ADMF01000034.1| GENE 59 72188 - 72542 200 118 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEKLLS Prediction of potential genes in microbial genomes Time: Sun May 29 20:21:39 2011 Seq name: gi|319803947|gb|ADMF01000035.1| Sutterella wadsworthensis 3_1_45B cont1.35, whole genome shotgun sequence Length of sequence - 19733 bp Number of predicted genes - 19, with homology - 16 Number of transcription units - 9, operones - 3 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 316 234 ## - Prom 336 - 395 6.7 - Term 369 - 398 -0.5 2 1 Op 2 . - CDS 401 - 1132 631 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Term 1138 - 1182 1.3 3 1 Op 3 . - CDS 1196 - 2470 751 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases - Prom 2597 - 2656 8.0 + Prom 2625 - 2684 5.8 4 2 Tu 1 . + CDS 2895 - 4178 1338 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 4227 - 4276 12.1 + Prom 4251 - 4310 3.0 5 3 Op 1 1/0.000 + CDS 4481 - 5221 840 ## COG0217 Uncharacterized conserved protein + Term 5239 - 5282 1.7 6 3 Op 2 . + CDS 5357 - 6637 1443 ## COG0151 Phosphoribosylamine-glycine ligase 7 3 Op 3 . + CDS 6709 - 7428 513 ## 8 3 Op 4 14/0.000 + CDS 7425 - 8093 470 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 9 3 Op 5 14/0.000 + CDS 8157 - 8561 607 ## COG0799 Uncharacterized homolog of plant Iojap protein 10 3 Op 6 1/0.000 + CDS 8561 - 9028 465 ## COG1576 Uncharacterized conserved protein 11 3 Op 7 . + CDS 9038 - 9670 558 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Term 9862 - 9889 1.5 - Term 9661 - 9693 -0.9 12 4 Tu 1 . - CDS 9758 - 10090 663 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 10169 - 10228 2.0 13 5 Op 1 . + CDS 10658 - 13888 2002 ## 14 5 Op 2 . + CDS 13972 - 14361 279 ## gi|302860119|gb|EFL83196.1| conserved hypothetical protein 15 5 Op 3 . + CDS 14374 - 16155 1434 ## COG0006 Xaa-Pro aminopeptidase + Term 16222 - 16269 14.0 - Term 16482 - 16521 9.1 16 6 Tu 1 . - CDS 16580 - 17419 1172 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit - Prom 17529 - 17588 4.4 - Term 17794 - 17832 4.6 17 7 Tu 1 . - CDS 17871 - 18518 828 ## COG0035 Uracil phosphoribosyltransferase + Prom 18572 - 18631 1.8 18 8 Tu 1 . + CDS 18663 - 19232 556 ## CtCNB1_1398 hypothetical protein + Term 19323 - 19356 4.1 - Term 19077 - 19115 3.2 19 9 Tu 1 . - CDS 19284 - 19682 472 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein Predicted protein(s) >gi|319803947|gb|ADMF01000035.1| GENE 1 1 - 316 234 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRR >gi|319803947|gb|ADMF01000035.1| GENE 2 401 - 1132 631 243 aa, chain - ## HITS:1 COG:NMA1419 KEGG:ns NR:ns ## COG: NMA1419 COG2197 # Protein_GI_number: 15794331 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Neisseria meningitidis Z2491 # 6 217 3 211 218 125 33.0 9e-29 MENRQIRVLVVDEYPLFRKGITDVLASHPDFQVIGATADDKTALSLLSLKPDLLVLDLDA QGFSPTDLLSEVKYRLPSCRTLMLLNKAESSQVLMQAIRLDANGFILRTVSTDEFIDQLK LVHSGGMAASDKITAALADHLRTRVQKKPAKDPSITQLLTNREYEVLCCVASGLANREIA QVLKITDGTVKVHVKHLLKKLKFRSRVEAAVWASEHDFRLSPDQFLQVVKRSLKAQKRSR HFS >gi|319803947|gb|ADMF01000035.1| GENE 3 1196 - 2470 751 424 aa, chain - ## HITS:1 COG:BH0761 KEGG:ns NR:ns ## COG: BH0761 COG0624 # Protein_GI_number: 15613324 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Bacillus halodurans # 28 419 29 409 414 182 30.0 2e-45 MTEQYSLDLDEAQFAKMLFDHVREMSKDVAGVTRQGYGPLETQVLEYLKGIGGKLDLDIQ TDLAGNVWMTLPGTDRTLPAFVSGSHADSVPQGGNYDGLAGIVAALCAAHWMRRHHYTPK RDFTVLMMRCEESSFFGKAYVGSLGMMGKLTAADLALKHRSTGETLGECIRSCGVDPERL TTGEPVIDPKRIAAFVELHIEQGPTLTSQTLTRTGIVTGIRGNIRHKNVKVLGETAHSGA VNKEYRHDAVMAAARLISRMEDRWQARLDAGDDLVFTVGVIKTAPTAAISVIPGEVSFTV DMRSLSMDTVKAFHEDLLATARSLAAERGVRFEFDTPLYTQPAHVDASLANRLEASAKRA GIPVMRLASGAGHDSAVLGNCGIPVAMIFVANQKGSHNPHEAMELEDFIKGAELLRHAVE DFDL >gi|319803947|gb|ADMF01000035.1| GENE 4 2895 - 4178 1338 427 aa, chain + ## HITS:1 COG:HI0584 KEGG:ns NR:ns ## COG: HI0584 COG1473 # Protein_GI_number: 16272528 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Haemophilus influenzae # 10 425 6 422 423 452 51.0 1e-127 MSVCVAKYHDQLISIRRHLHTMPEEGWSEFTTTNFIVEKLKEYGYQVLLGTKVINPENCL GRSQKVVDAGIAYARKNGVSEDFLKATEGYTGCCGILDTGRPGPTLAVRFDIDCVPVTES TEQDHIPQSEGFESTRPGLMHACGHDAHMSTGLALAHWVADHKDELKGRIKFLFQPAEEG VRGAAAMAASGIVDDADFFLGAHIAMMCKSGEISVNPYGFLCTTKMDVTYTGRPAHAGVE PNAGRNAMAAACNAFVQLLGIARHGSGMTRINVGQLNAGEGRNVIPSHAVMKMEVRGETG EINQYMYDSAVQIIKGCALSQGCEYTIEKMGEAVDLTNDQTLVDVLTQAGNAVEGMNVRK DPMNFGGSEDATILARRVQAHGGKAAFFVLGADRPSGHHTARFDIDEKALDKGLAVWANA VSILLKK >gi|319803947|gb|ADMF01000035.1| GENE 5 4481 - 5221 840 246 aa, chain + ## HITS:1 COG:NMB1648 KEGG:ns NR:ns ## COG: NMB1648 COG0217 # Protein_GI_number: 15677497 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 242 1 241 242 292 62.0 4e-79 MSGHSKWANIQHRKGRQDAKRSNLWTKLVREIIVAARMGGGDPDTNSRLRLALIKARGGN VPKDTIQNAILKGTGQLEGVSYEDVRYEGYGVGGAALIIDCTTDNRVRTVADVRHILSKN GGNLGTEGSVAFMFNHVGDFFFAPGVATEDQVMEVALDAGAEDVISDEDGSIEVTCAPEA FDAVSKAFEAAGLKPEMAEITWKPTNETHLAGEEAARMQRLIDALDELDDVQQVYCSAEL DLPDEE >gi|319803947|gb|ADMF01000035.1| GENE 6 5357 - 6637 1443 426 aa, chain + ## HITS:1 COG:NMA0238 KEGG:ns NR:ns ## COG: NMA0238 COG0151 # Protein_GI_number: 15793256 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Neisseria meningitidis Z2491 # 1 426 1 423 423 547 66.0 1e-155 MKLLVIGSGGREHALAWRLSQSAGVEKVFVAPGNAGTALEPALENIALKSNAELIEFVRR EGVAFTVVGPEAPLAAGVVDDFRAAGLKIFGPTKAAAQLESSKDFAKAFMKRHHIPTADY ETFTDPAAARAYVEKKGAPIVVKADGLAAGKGVVVAMTVEEAVSAIDSMLEGHQFGAAGA RVVIEDFLEGEEASFIVMVDGEHILPLATSQDHKRLLDHDQGPNTGGMGAYSPAPVVTPE IHDQVMREIIRPTVEGMARDGIRYTGFLYAGLMIKRRADGTNDVRTLEFNCRMGDPETQP IMMRIRSNFAETVEAAIDGKLDTAEIDWDPRSALGVVLAAKGYPTSPEKGAVITLPENTA DSRIFHAGTKTDEQGRVVVSGGRVLCAVGLGSPLAQAQMMAYKLADGVKFDGMQMRRDIG WRAINR >gi|319803947|gb|ADMF01000035.1| GENE 7 6709 - 7428 513 239 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLMSFSVPVFAGMLFLDLMTKSGTFRFFALAALTLVLPVSGASAGSLGDNGAHAAPFGYP STALNAPATLAEPPAAYVQIGRERLQLGEAELETAALRWGAARLREGTGLFERDYACFEG TESGKPILLWLISSDLKTVTEAQIERVTSERIPAHCGKLVGTDLPVRLGRVGLDMTPKQS AEAVGIPSYNDGFGWQFWFSQRFLKNARGLQELELDWLGVEFQNGRAVRGFASLVKNPS >gi|319803947|gb|ADMF01000035.1| GENE 8 7425 - 8093 470 222 aa, chain + ## HITS:1 COG:YPO2607 KEGG:ns NR:ns ## COG: YPO2607 COG1057 # Protein_GI_number: 16122820 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Yersinia pestis # 7 218 12 218 220 109 34.0 4e-24 MIPRGIGLLGGTFDPVHCGHLELARAARRALGLVRVDLLPAGAPWQKDLVTPAQERLEML QLAVGTDRDAGIGIETIELMRLGPTYTIDTLMALRRRLGFAIPLVLILGGDQWTNLHTWK HWRNLLDYASLGICRRAGAPLSASAEVEAWSADRWTAPELLTTTTFGRIAQFEMAPHEAS ATEVRRLIRKLPFAVAMKCVDGWLPLEVAAYMRGRGLYGAHD >gi|319803947|gb|ADMF01000035.1| GENE 9 8157 - 8561 607 134 aa, chain + ## HITS:1 COG:RSc2194 KEGG:ns NR:ns ## COG: RSc2194 COG0799 # Protein_GI_number: 17546913 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Ralstonia solanacearum # 1 107 1 107 203 147 65.0 6e-36 MELETLTQTIINALEDVKARDIKVFNTEELTDQFECVVIASGTSGRQTRALAYAVSHAVK EAGGSVIGMEGDDTGEWVLVDCGQVVCHVLQPNVRDYYNLEEIWGGKELFLKAQTECAPH LMPHRAHKSEQSAE >gi|319803947|gb|ADMF01000035.1| GENE 10 8561 - 9028 465 155 aa, chain + ## HITS:1 COG:RSc2195 KEGG:ns NR:ns ## COG: RSc2195 COG1576 # Protein_GI_number: 17546914 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 154 1 155 156 139 49.0 2e-33 MRVRILAVGQHIADWAQEAVRGYLARFPRSWSVDLKEIRTEHRAGQTPAKLMQLEAERLL AAIEPGDFVVVLDEHGKDLTTVDLARQMHAWGGEGDRVVFVIGGPDGLAPEVKAAARATV RLSAMTLPHALARVLLAEQLYRVWSIEAGHPYHRA >gi|319803947|gb|ADMF01000035.1| GENE 11 9038 - 9670 558 210 aa, chain + ## HITS:1 COG:ECs4120 KEGG:ns NR:ns ## COG: ECs4120 COG0424 # Protein_GI_number: 15833374 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli O157:H7 # 3 203 2 187 197 154 45.0 1e-37 MDTLIYLASKSPRRREILSNLGWEPVVLADPKAPRGWFAGDEEEKPGETPEDYVLRTAVV KLMDGLCARNELPDVREDRPVLAADTVVSLDGRVLRKPRDRAEAEAFLRSMSGRTHEVRT AVAVGVSRAEWDSVVVTSTVEMRELSEAEIAAYAATAEPYDKAGGYGIQGAAGLFICRIS GSYSAIMGLPVCESGELLARFGAKAPILGL >gi|319803947|gb|ADMF01000035.1| GENE 12 9758 - 10090 663 110 aa, chain - ## HITS:1 COG:DR1839 KEGG:ns NR:ns ## COG: DR1839 COG0545 # Protein_GI_number: 15806839 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Deinococcus radiodurans # 4 110 46 152 152 120 55.0 4e-28 MALEKLIIEDIVEGTGPGVAAGDRISVHYTGKFEDGTVFDSSVERGEPIDFTCGVGMVIP GWDQGLIGLKKGGKRRLSIPYALAYGEAGYPGAIPPKADLYFDVELVGIK >gi|319803947|gb|ADMF01000035.1| GENE 13 10658 - 13888 2002 1076 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLDNLPEQLQKNLEAAGLADLTVDQCEIIRRFLAGERTLVSGHDGAGKLTALVIGFAAK ALASRRSLETGRLPEGLLITNHPEDAIVAAALFERLTHGSGLKAAGVSIGRNVPRMREIE TGIDFAAGPLDYLEAEFERSGLKLSALKTAAVYRVDEFAAKPALWRRLVDAATEMSKTAR CGIIFTMGSRSTDTERLVRALFPSTNVVRLLGRWREPDILEAFRLVKRRGRLAEVMRLIK AVPDGERILVIAGRKRAAEFAEVFLEEKWMAPGVFEIYTPADAEQYWTNGNPKVIAATEV LAKLFPNGFFDHVIFGDLPTSAARYEECAAKAAFPPSPERPRFGRVSTIFLASQIADFVQ LRNDVGSENWGLLNETGAKLADEDVQYLDNGENQQLRERACWTALRDRLPTTEIPGYPEA IQCGTPSAAVTQELPQAVPVSISSESSRADTEELIEKKPQKKPVRRKTRKSTPVETQTEA QKTAEPVIEETPVETALAPQALPASSIVVTGDLPADVPETLSAAEKAEDAFEKETAQEVG EEDDLFAQEDHEEVEPVSKADNTDEDFSWIEEAYGAEDGTDEAEDLGDETDEDESFDDEE DDGGYEAHFDDDSEAPHRRTLTIRAGYVPHAVEGPAVTITEPLSSNTVELRAAQARMRRE MKSGGRMTHQMVGKRGTIRRQKQRADQPLNEIEGILSVAQPGKKKKAGAYSKKNTQNGLA RTKESSKFKKSKKQGLQKTFKKRKQMGGEQPPVLPAEENRDLLLLPMTTPPVADGITEPE NPEGMPKEEVALSSAVLQGDDRPNEQKQQKPRKEFRKGRGLRSAMMKRREAREAREAREA ESREGQIPAMGERSESDASTNIPPEKIDGEAEEFFTQRSGDAAEGVGGFQADAPRQEKRK KSWPNKKFKKPFKKKAQKFREAGDAGAGETDRFNRADNEGPRMPRKTQASRVPREDINDD NFGNSIHYRMKSERKTQAMPWQTTSTYGAEDRPTTLSFAQMMPESADRTGLHTVFGSEDG SQRNRKGKFNNRKGGFAGGSKNYGQKKFGKYQKFRKKSGGRKPEGNDGGESPGSDE >gi|319803947|gb|ADMF01000035.1| GENE 14 13972 - 14361 279 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302860119|gb|EFL83196.1| ## NR: gi|302860119|gb|EFL83196.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47] # 33 129 22 118 118 65 36.0 1e-09 MYFTVPSCKRRLALAAVLLSALVLAGCAVAPNTGSGSRSGHSGSSSTQTRDPLLDAPHHS ETTCTTDRPVTVLSRMSETPLVCDDLGVTTTLSEMRDAGWRVVTLSIGADTESEKHVGFP VTVIVRKLF >gi|319803947|gb|ADMF01000035.1| GENE 15 14374 - 16155 1434 593 aa, chain + ## HITS:1 COG:NMA1640 KEGG:ns NR:ns ## COG: NMA1640 COG0006 # Protein_GI_number: 15794534 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Neisseria meningitidis Z2491 # 7 584 69 650 659 415 42.0 1e-115 MQALDRLAKLRAAMENLGIDAVIIPTADPHLSEYVPAHWSLRAALSGFTGSAGMLLVSAE DAALIADSRYWEQAEKQLPAEIALIRLTGSFLDHVTAWCEENLPQGSIVGYDPELVSLNL AEKLRSLLEDLGFEADALAGERSLPLADIWPDRPPLSMSPIRLMKRPGRSIVEKLEAVRS MMADKGAQSVFFSALDDVAWMTNLRGSDVPCNPVFLAYLLVERDSAELFVDAERLSAEAA RAIADAGIATVSPSTLHEALAAAALRGQVMLDPDHTNSLLAALVPPESQVRSASPAMMLK CVKSAEEIRAIEEAHLKDAVALAEFYAELDERLAAGDVLTESDAAQMLHAWRAKDPEFFE ESFTTIAAYGPNAALPHYTPPIHGGAVLEPDGLLLIDSGGQYECGTTDITRMTPIGNPSP AMRRDAAIVTRAMLRLLHLKFPAGATGAQIDAAARIDLWAHGLDFGHGTGHGVGYVLNVH EGPVAISPRAQPVAIQPGNVLSDEPGVYRPGRWGIRVENLMVCEQEQTTEFGEFLKFRAL TMLPIDVRMFKEPFGEGVELLNAFNAERRDKLMPLVSPRAQKWLSAAAAELPV >gi|319803947|gb|ADMF01000035.1| GENE 16 16580 - 17419 1172 279 aa, chain - ## HITS:1 COG:HP0193 KEGG:ns NR:ns ## COG: HP0193 COG2009 # Protein_GI_number: 15644822 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Helicobacter pylori 26695 # 23 245 12 223 255 121 36.0 2e-27 MTTPDSIKYAHTPSATDNVWGVGLKDAKRQSKCTARLDVAQSVTGLILGIFLFCHMGFTG SVNFGKDLFANLIATSGGVWLDGADHAWMHVLFVGFIFLCVIIHMFCALRRFPTSYKKLH DLHSHVKLVHHEDTTLWYVQLITAFALFFLVFPHLMTMLTNPHGFDPNLIGVHTYHNGLL YTFIFLVCTELHGMIGLYRLAVKWDIFAKNPDSKIMDQRAATDRTGLRKGMLVVALLMIV GGSITMWTNYSIGADQVAKNAEAERYVVPAEANWYAPAK >gi|319803947|gb|ADMF01000035.1| GENE 17 17871 - 18518 828 215 aa, chain - ## HITS:1 COG:RSc2188 KEGG:ns NR:ns ## COG: RSc2188 COG0035 # Protein_GI_number: 17546907 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Ralstonia solanacearum # 1 215 1 215 216 307 69.0 8e-84 MKFDPRFPRLHIVDHPLVQHKLSLMRDKRTSTRDFRELLTELAILMGYELTRDFPVALED IETPVAKCKSPMLSGKKCVIVPVLRAGLGMSDGLLTLMPSARVGHIGLYRDENHRPVEYM VKLPDLDGRTFIVVDPMVATGYSGAHAVDVLKKRGVPGDSIRFMALVAAPEGVEVFSKLH PDVDLYVASLDDHLNENAYIVPGLGDAGDRIFGTK >gi|319803947|gb|ADMF01000035.1| GENE 18 18663 - 19232 556 189 aa, chain + ## HITS:1 COG:no KEGG:CtCNB1_1398 NR:ns ## KEGG: CtCNB1_1398 # Name: not_defined # Def: hypothetical protein # Organism: C.testosteroni # Pathway: not_defined # 1 145 1 145 151 67 31.0 3e-10 MKLRTLCMLLVLVLLAVFLVINWSALSQDMTVNLVYQEIQAPLGVIVAAAFGIVVVLQAF YNLWQQASVVVELRQAHKEARNARAEAAEADKNRVNELAREVREGFARMEALVTQQQEAT AKLIREKSDQHDRAAAVLRDQIKAEQDAAQSAVSKRLLEIEKKVSNVLPAAPGEVKDEKK TKELFGQLF >gi|319803947|gb|ADMF01000035.1| GENE 19 19284 - 19682 472 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 2 123 453 574 584 80 32.0 2e-14 MALRTNEVPNPFKALELYRQRNAVECSYRVFKNQIEGDRMLATQTSYRGKLFVFTLATCL RTMMRVKAEAQAKEFDLKIPGNSLSQVFEILRGVTMQRWGSTDSWRINMLTRKQRECFAL FGMTPIKGTRKD Prediction of potential genes in microbial genomes Time: Sun May 29 20:23:02 2011 Seq name: gi|319803896|gb|ADMF01000036.1| Sutterella wadsworthensis 3_1_45B cont1.36, whole genome shotgun sequence Length of sequence - 57890 bp Number of predicted genes - 53, with homology - 47 Number of transcription units - 35, operones - 11 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 352 182 ## - Prom 378 - 437 7.0 - Term 501 - 540 6.1 2 2 Op 1 1/0.167 - CDS 579 - 1595 1185 ## COG0158 Fructose-1,6-bisphosphatase 3 2 Op 2 . - CDS 1616 - 4288 2549 ## COG0308 Aminopeptidase N - Term 4424 - 4459 2.3 4 3 Tu 1 . - CDS 4486 - 5076 833 ## COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit - Prom 5178 - 5237 2.7 5 4 Tu 1 . - CDS 5306 - 6112 661 ## COG2005 N-terminal domain of molybdenum-binding protein - Prom 6187 - 6246 2.9 + Prom 6113 - 6172 3.4 6 5 Op 1 23/0.000 + CDS 6280 - 7047 1122 ## COG0725 ABC-type molybdate transport system, periplasmic component + Term 7114 - 7146 -1.0 + Prom 7132 - 7191 3.8 7 5 Op 2 13/0.000 + CDS 7212 - 7907 785 ## COG4149 ABC-type molybdate transport system, permease component 8 5 Op 3 . + CDS 7917 - 9014 749 ## COG4148 ABC-type molybdate transport system, ATPase component + Term 9060 - 9112 5.2 - Term 9049 - 9097 5.0 9 6 Tu 1 . - CDS 9150 - 10517 1608 ## COG0015 Adenylosuccinate lyase - Prom 10606 - 10665 4.1 10 7 Tu 1 . + CDS 10730 - 12550 2013 ## SeSA_A4188 arylsulfotransferase 11 8 Tu 1 . - CDS 12621 - 12827 102 ## + Prom 12588 - 12647 4.3 12 9 Tu 1 . + CDS 12741 - 13334 509 ## + Term 13383 - 13432 2.5 - Term 13371 - 13420 2.5 13 10 Tu 1 . - CDS 13452 - 14306 793 ## COG4566 Response regulator - Prom 14339 - 14398 2.2 + Prom 14300 - 14359 2.1 14 11 Tu 1 . + CDS 14470 - 15594 687 ## COG1801 Uncharacterized conserved protein + Term 15718 - 15756 -0.1 15 12 Tu 1 . - CDS 15626 - 16171 565 ## HEAR0477 hypothetical protein + Prom 16223 - 16282 1.9 16 13 Op 1 . + CDS 16384 - 17046 447 ## COG1878 Predicted metal-dependent hydrolase 17 13 Op 2 . + CDS 17088 - 17543 521 ## COG0824 Predicted thioesterase 18 14 Op 1 . - CDS 17554 - 18369 571 ## COG0796 Glutamate racemase 19 14 Op 2 . - CDS 18366 - 19280 767 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 20 14 Op 3 . - CDS 19277 - 19639 410 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 19666 - 19725 5.0 - Term 19651 - 19689 9.1 21 15 Op 1 1/0.167 - CDS 19770 - 20816 884 ## COG0009 Putative translation factor (SUA5) 22 15 Op 2 29/0.000 - CDS 20828 - 22021 1200 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 23 15 Op 3 4/0.000 - CDS 22031 - 22570 578 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Prom 22591 - 22650 2.7 24 15 Op 4 . - CDS 22720 - 23613 1194 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 23647 - 23706 3.7 - Term 23661 - 23695 -0.7 25 16 Tu 1 . - CDS 23724 - 24140 516 ## COG0818 Diacylglycerol kinase 26 17 Tu 1 . - CDS 24251 - 25315 1492 ## COG0191 Fructose/tagatose bisphosphate aldolase - Prom 25453 - 25512 2.3 27 18 Op 1 13/0.000 - CDS 25520 - 26926 1150 ## COG0860 N-acetylmuramoyl-L-alanine amidase 28 18 Op 2 . - CDS 26908 - 27426 467 ## COG0802 Predicted ATPase or kinase - Prom 27671 - 27730 79.9 + TRNA 27652 - 27727 87.1 # Thr CGT 0 0 - Term 27800 - 27847 -0.9 29 19 Tu 1 . - CDS 27887 - 28564 727 ## CLL_A0339 cyclic nucleotide-binding domain protein - Prom 28759 - 28818 3.7 30 20 Tu 1 . + CDS 28594 - 28950 311 ## Sterm_1353 hypothetical protein + Term 29141 - 29178 8.0 + TRNA 29052 - 29127 87.1 # Thr CGT 0 0 - Term 29129 - 29166 8.0 31 21 Tu 1 . - CDS 29241 - 31772 2478 ## Rpic_0766 protein of unknown function DUF748 - Prom 31978 - 32037 5.5 + Prom 31896 - 31955 2.2 32 22 Op 1 16/0.000 + CDS 32021 - 34264 2116 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 33 22 Op 2 . + CDS 34279 - 34914 552 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 + Term 34935 - 34982 10.6 - Term 34923 - 34970 11.4 34 23 Op 1 . - CDS 34993 - 35646 560 ## DSY0530 uncharacterized component of anaerobic dehydrogenase 35 23 Op 2 . - CDS 35689 - 36270 438 ## COG0778 Nitroreductase 36 23 Op 3 . - CDS 36304 - 36597 209 ## 37 24 Op 1 1/0.167 + CDS 37343 - 38791 1505 ## COG1288 Predicted membrane protein 38 24 Op 2 2/0.167 + CDS 38812 - 40167 801 ## COG0044 Dihydroorotase and related cyclic amidohydrolases + Term 40192 - 40229 4.6 + Prom 40264 - 40323 7.7 39 25 Tu 1 . + CDS 40444 - 41859 1029 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases + Term 41909 - 41957 11.6 + Prom 42039 - 42098 10.6 40 26 Tu 1 . + CDS 42289 - 43062 915 ## COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization + Term 43139 - 43182 2.4 41 27 Tu 1 . - CDS 43066 - 43182 67 ## - Prom 43405 - 43464 1.8 42 28 Tu 1 . + CDS 43204 - 44232 988 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 43 29 Tu 1 . + CDS 44397 - 45323 966 ## COG0549 Carbamate kinase + Term 45382 - 45416 5.0 + Prom 45385 - 45444 4.5 44 30 Tu 1 . + CDS 45473 - 46564 644 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 46581 - 46629 9.7 - Term 46831 - 46878 0.3 45 31 Op 1 1/0.167 - CDS 47048 - 47734 511 ## COG0546 Predicted phosphatases 46 31 Op 2 . - CDS 47796 - 48464 849 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins - Prom 48596 - 48655 3.5 47 32 Tu 1 . - CDS 48664 - 49989 1332 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases - Prom 50084 - 50143 2.5 + Prom 50043 - 50102 3.2 48 33 Tu 1 . + CDS 50216 - 53128 3406 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 53147 - 53200 16.7 49 34 Op 1 . + CDS 53229 - 54335 1056 ## COG1932 Phosphoserine aminotransferase 50 34 Op 2 21/0.000 + CDS 54356 - 55012 774 ## COG0283 Cytidylate kinase + Term 55036 - 55079 6.1 51 34 Op 3 16/0.000 + CDS 55127 - 56845 2303 ## PROTEIN SUPPORTED gi|187924977|ref|YP_001896619.1| 30S ribosomal protein S1 52 34 Op 4 . + CDS 56867 - 57175 414 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 57231 - 57270 8.2 + Prom 57461 - 57520 6.7 53 35 Tu 1 . + CDS 57540 - 57888 202 ## Predicted protein(s) >gi|319803896|gb|ADMF01000036.1| GENE 1 1 - 352 182 117 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRKAAVEPKWNFYLDTNKSTGIQYVQTSYNIWVPEKKQPRLGGKAYVGRLFPDGSVRPS KSFLERFPQYADKKLYYFENQLVDREGYLKLNPNAEAQWEELQSQEKTAEQQQEERR >gi|319803896|gb|ADMF01000036.1| GENE 2 579 - 1595 1185 338 aa, chain - ## HITS:1 COG:PA5110 KEGG:ns NR:ns ## COG: PA5110 COG0158 # Protein_GI_number: 15600303 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Pseudomonas aeruginosa # 1 338 1 336 336 387 58.0 1e-107 MTPLSLQEYLSREIGYDAERMDGTPDPALARLITGISEACKEISAKVREGALAGVLGLAG SENVQGEDQKKLDIISNDIFVEAVSRTGSVCGMVSEEVPEPIAVRDDLPLGPYLACFDPL DGSSNIDINVSIGSIFAILPAREIKRTPETADFLQPGTALVAAGYCMYGPQTILVLTIGR GVVMFTLDDETGTFRQTAADVTVPREAAEFAINMSNQRFWEKPVQRYISELLAGKDGPRG KNFNMRWIAAMVAEVHRILMRGGIFMYPRDSRNPERAGKLRLLYEANPMSMIMEQAGAAA TNGHVAIRTIKPTSIHERVAVFLGAAEEVERATAYHED >gi|319803896|gb|ADMF01000036.1| GENE 3 1616 - 4288 2549 890 aa, chain - ## HITS:1 COG:RSc2125 KEGG:ns NR:ns ## COG: RSc2125 COG0308 # Protein_GI_number: 17546844 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Ralstonia solanacearum # 4 886 9 904 905 771 47.0 0 MSQTIHRSDYRAPTHLLEDIQLEFDLNAEETLVTSTFTARPNPESKDSSGELHLNGESLT LKSVEVDGQLLGDEQFKVDAHGLIIPGINGKKTVKIINTMSPKANTELSGIYASGRCLMS QCESQGFRRITYFLDRPDVLARYTTIIRGSTGDFPVMLSNGNLTEDRILEDGRREVVYVD PFLKPSYLFALVAGHLVSRADKFQLKDGRVVDLSVWVESQDLDKTEHTLESLKRAIRWDE ERWGLELDLNDFKIVATNDFNFGAMENKGLNIFNSRCALANPTVATDADYLRIEGVVGHE YFHNWTGDRVTLRDWFQLTLKEGLTVFRDQEFSADMLGSPSARAVQRIHDVAFLRAAQFQ EDAGPMAHPIRPESYQSINNFYTTTVYEKGAEVIRMLQTLLGREVFRQGFDEYIRTNDGH AVTCEAFLEAMSKASGRDLSQFRRWYSQAGTPRVVVRSRWDEENHRLTLLVDQSTPATPG QPTKLPLLIPFPVAFLSPSGEEMPVQLASEDEAPLPGTRMFELTQEHTELVFGGLAVKPA VSLNRGFAAPVILDQGLSDEELAFLARHETDPFNRWDAMNRLLINAVHTQTRAKLLRTPE EVSPLVITAALEVLKNPDLSPAFKAAALSLPSEKLVAEEDPLIDPQAIHAGWVAVQQAIG EKNVSAFLEAAHDNEVTGPYEPTPEKAGMRSLRNLCLAYAHAAGNPRAAIMLKDQYQTAN NLTDKLAALQTMVNSQTPAKSDMEVDALKRWYNEPLLINKWLTIQATATSFPGEPLVLER VKELTNCEFFSIKNPNNVYALLCAFFQQNPAEFHLADGSGYEFWKDMVLKLDPINAQVAA RVARSLDNWRRYTPALAEKMHDALEAVYAKKSELSPNVAEIIEKALKNPL >gi|319803896|gb|ADMF01000036.1| GENE 4 4486 - 5076 833 196 aa, chain - ## HITS:1 COG:VC1951 KEGG:ns NR:ns ## COG: VC1951 COG3005 # Protein_GI_number: 15641953 # Func_class: C Energy production and conversion # Function: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit # Organism: Vibrio cholerae # 8 183 11 174 368 91 31.0 1e-18 MEKNSVWYLAGICLIGVVIGIIFVGVLTSVVHWAGTEKFCGEFCHSMDVTYAAYKKGDHF RTASGVTAGCSDCHLKNESNHFAGPIDYTALLIDKAIAGSKSLFGEIRGTMSTPEKQIEK RPEMATAVHQQMIDRNFSACRGCHDVERMYDPKKPLIGAIHKGMGPNAEKKVDCLACHPT AGHNYGYVIPFKAAAN >gi|319803896|gb|ADMF01000036.1| GENE 5 5306 - 6112 661 268 aa, chain - ## HITS:1 COG:PM0746 KEGG:ns NR:ns ## COG: PM0746 COG2005 # Protein_GI_number: 15602611 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Pasteurella multocida # 3 204 9 199 263 98 31.0 1e-20 MSLSAQIRSNALADPKLLSDILSEKTDRRIDILRRIADVGSISEAARSAGMSYKSAWQAV ETLTNLAGTPIVEKVVGGANGGGTQLTATGRLILDLSDELARARRQVLEKYNAADATAPG LLARATASSLQTSMRNQFPARITVMKLGAALVRFILRIDDTHLLKASVTKESAQLLGLRE GMEVLALTKATGVEISGSFPEDPNAIDDNLIVGEVIRSERAGKGGECSIRLPSGIVIVGF AHGNHGLKLHDRAVAHIPPSSIVIAIAG >gi|319803896|gb|ADMF01000036.1| GENE 6 6280 - 7047 1122 255 aa, chain + ## HITS:1 COG:PA1863 KEGG:ns NR:ns ## COG: PA1863 COG0725 # Protein_GI_number: 15597060 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 24 251 24 249 251 209 51.0 5e-54 MKKSIIGAAVAAAALVCSFAVAAEEVHVAVAANFTAPAKDLQPIYEKATGDKLVLSFGAT GAFYAQIKNGAPFDILLAADAKTPAKAVAEGHGVAGTPFTYAVGKLVLWSSDANLVKNDV AAVLNSANVKHVAIANPKLAPYGEAAYQTLKSLGLEKAVEGKTVLGDNIGKTYQFVKTGN AEAGFIALSQCFKDGKFVSGSGYVIPQDLYSEIKQDAVLLKKGENNEGAKRFLKFLKESQ EATAIRDAYGYGTAK >gi|319803896|gb|ADMF01000036.1| GENE 7 7212 - 7907 785 231 aa, chain + ## HITS:1 COG:PA1862 KEGG:ns NR:ns ## COG: PA1862 COG4149 # Protein_GI_number: 15597059 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Pseudomonas aeruginosa # 9 230 5 226 228 248 62.0 5e-66 MLKDFLELLKGVSLSPVQLSLELAAVTTLVLLLIGLPLSWWLARGQSRWCPAVNAVVTLP LVLPPSVLGFYILVALGPNGPLGMLTESLGLGTFNFSFPGLVIGSVIYSMPFMVQPLVTA FEGIGDRPMEVAATLRCHPFDAFINVVMPLARPGIITGILMTFAHTIGEFGVVLMIGGNI PGKTQVVSTEIYTHVEAMEYAQAHVLAGGMLIFSFIVLMSLNLLNKRRGGE >gi|319803896|gb|ADMF01000036.1| GENE 8 7917 - 9014 749 365 aa, chain + ## HITS:1 COG:PA1861 KEGG:ns NR:ns ## COG: PA1861 COG4148 # Protein_GI_number: 15597058 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, ATPase component # Organism: Pseudomonas aeruginosa # 10 364 5 360 361 287 46.0 2e-77 MTQENFGEARLHLVRSTGFTLEADIGIPQKGITVLFGPSGCGKTTLLRCVAGLERARGLV RIGSETWQDDERKIFRPTYERSLGYVFQEASLFAHLSVEKNLTFGLERTKVPDGKERLAE AVELLGIGHLLTRRVTELSGGERQRCAIARALCLRPEILLMDEPLAALDFARKREILPWI EKLKNELGIPVLYVTHSADEMTRLADKLVVMADGKVRREGPLAEVLADVKMPIETENGAS VVLSGKVSSLSSEWKTCCIDAGGWTFETPTASLAMGSQVRLRVLARDVSIAVEKPDSISI RNRLQAEVEEIAAHPSEPAYQLVKLKCPNGEGRLVSRILNQSVTELGLHPGSQVWALVKA SAVIM >gi|319803896|gb|ADMF01000036.1| GENE 9 9150 - 10517 1608 455 aa, chain - ## HITS:1 COG:RSc2720 KEGG:ns NR:ns ## COG: RSc2720 COG0015 # Protein_GI_number: 17547439 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Ralstonia solanacearum # 2 454 3 455 457 609 65.0 1e-174 MALNPLTALSPLDGRYSRQCDPLRGIFSEYAFMNARVRVEVEWLIALSEAGFAELPHLSD HGKAFLRGLAEHFSLDDCAAVKEIEKTTNHDVKAVEYWIKGQVAHDEELKNAAEFVHFAC TSEDINNTSHALMLMKGRDALVAFLEKIHDIIANYAHQWAEIPMLSRTHGQTASPTTVGK EFANVAVRLARVIEAIKSVKILAKMNGAVGNYNAHLIAYPDFDWEAFSKKVVEERLGAVF NTHTIQIEPHDYMAELFQEIERANTILIDFDRDVWGYISMHFFRQKLKEGEVGSSTMPHK VNPIDFENSEGNLGLANAVLGHLAGKLPISRWQRDLTDSTVLRNLGVAFGYSFVGYSALE RGLGKLQVNETQIAADLDAAWEVLAEAVQTVMRRYGVPHPYEQLKALTRGKDGINQETIR SFIAGLNIPADAKARLMALTPATYIGKAVELARRC >gi|319803896|gb|ADMF01000036.1| GENE 10 10730 - 12550 2013 606 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A4188 NR:ns ## KEGG: SeSA_A4188 # Name: not_defined # Def: arylsulfotransferase # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 11 604 4 605 607 715 57.0 0 MSKMPTSPISRRTLCGLAGSALFLSQFPRAAFAAGGPSGLKVDFPQQGELGEVIGNPYDI APLTAVIKNGGVVLTKAHVRVVPKKGGVEIAYDVGPTTLRTYGGIPVFGLYPEYLNTVEV TWTKREGGKLTEKAETYRIWTPPVYLDPAWTKGRPVKTFETEIIKPASKEFADRLYLCNN LMGSSPKGKRAVWNNPSGGALEWNSYPQNAILDTQGEVRWFLQPQAIYDPRSIYRAGLMM GFHQNADGALSFGYGQTYAKYDLLGREIFNRRLPEGYADFSHAMAEGPNGHYFLRVSSAD LRRADGTHVHTVRDVVIEVDASGRVVDEWRLFEILDPNRSIVLKAIDQGAVCLNVDLSKT GETLSAEQLAKLEAKNAFGDIPGTGAGRNWAHVNSVDYDPADDSIIISSRHQSAVIKIGR DKAVKWILSAPNGWNDQLKGKVLTPVDAGGKPITCRIGRCEGEFDWTWTQHTGWKVDELS EPGVTVLTVFDNGDGRAFQQPENAAEKYSRAVMYRIDEKKGTVEQIWEYGKKRGHELYSA ITSSVEYQADHDSLVVYWASRKLAEGGEPILTEFKRGGQEPVFEMALKGTMGYRAVVIDV KKAFNP >gi|319803896|gb|ADMF01000036.1| GENE 11 12621 - 12827 102 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPGGGHRRRTDAEGAQGSQRRNDLGALIHLRSFAGTVGRRVFVSFNVIQKAKLLRIRSLD DFQFKGIT >gi|319803896|gb|ADMF01000036.1| GENE 12 12741 - 13334 509 197 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKSTKIISSLAALGALCVGTAAMASPWHNGNCPGAGVPEAQCPIAADGPRADGPRFNKP SRQVDPAVRAARWDAIARMLTIKPEQEAAWKAYTAARDAERTPIAKTDDKKLAVDVQTRL QLRADRAKVRADLLAKSAQARADLLNVLSPEQKYVLEGMEFHHGARMMDRGPYHKGGFDA DRGPGPRGPMNAAPCCQ >gi|319803896|gb|ADMF01000036.1| GENE 13 13452 - 14306 793 284 aa, chain - ## HITS:1 COG:AGl218 KEGG:ns NR:ns ## COG: AGl218 COG4566 # Protein_GI_number: 15890219 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 54 243 3 194 218 99 36.0 6e-21 MPNPLPSDQRRFAAESPFDAAFGYGSAPISTPTSEGRHDSSQTAGRAADEDGLQPADTPA ELTGPVWVVDDDDVRESLTFALQPRFEAASYPTLEAFLTQADLMQPGCLVIADRFAGLNE SSLDEFNVQHELELRRSPVAVVFLSSLANIRAAVRALRQGAVSFLENPVDPEELGDAVAE GLERALRRAQRNRLAERFESLSKRERQIFVLICRGLKNGDIAALLELSQRTVEVHRAHIS RKLGDAAPIRLLYELILAEGETLFNVSFDGIRPEGLAKVFAATK >gi|319803896|gb|ADMF01000036.1| GENE 14 14470 - 15594 687 374 aa, chain + ## HITS:1 COG:RSc0765 KEGG:ns NR:ns ## COG: RSc0765 COG1801 # Protein_GI_number: 17545484 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 14 371 31 355 355 202 39.0 1e-51 MEPLDALFDDGPPAEAPIAPQPPDGALRDLAARLPRTMRLGTSTWNFPGWRGIIWSRGSG LTGLAENGLTAYSKNPLLRTVGLDRNFYRALTTAHFAHYAAQVPEDFRFIVKAPREVTDP YERDDRGRPTGTNPLFLNAHAAVDKFLGPARLGLGRKAGPLVFQFSPVPHPELRTLEARI KLFERITTFLAELRTPGDGLLLAAEFRNYELFTPRMMKRLRTLGVSPVIGLHPAMPGIRR QTEALRCWAGEFRESEAEQSGESDVFVPKASGSSAAPAAAADWHLPGPLVVRWSLAAHQF YDTAKQSWAPFDAIHAADPATRALIASLLVKAARSGQDSFLAVNNKAEGCAPKTVRGIAE IADRILEADRPVVR >gi|319803896|gb|ADMF01000036.1| GENE 15 15626 - 16171 565 181 aa, chain - ## HITS:1 COG:no KEGG:HEAR0477 NR:ns ## KEGG: HEAR0477 # Name: aoxC # Def: hypothetical protein # Organism: H.arsenicoxydans # Pathway: not_defined # 4 168 21 188 203 62 31.0 7e-09 MLADEFAQTIAERRSVGPKQQTHNAPSDDVFVRAARAARSAPSHNPFFPCRFVKVVSREK LADVFESALPPEADQVLRDRARSKALKGAACIVIIGPKPTPDTPVIMDMENLMTAGGALT NFLNVLWAEGVAAKTLTSREIKDPQGLFDPKTERLLGFILCGLPQEPMQPRDPEPSILSE W >gi|319803896|gb|ADMF01000036.1| GENE 16 16384 - 17046 447 220 aa, chain + ## HITS:1 COG:PA2081 KEGG:ns NR:ns ## COG: PA2081 COG1878 # Protein_GI_number: 15597277 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 7 220 8 210 213 135 39.0 8e-32 MKQSLIDITPKMGVRTPVYPGDPPFVVRLTASVAAGDPADVSAVSFSAHCGAHVDAPAHL FPGTGDAASLPLERFVGPCLVIDLTELEPEAAPSELVRPQTIAAVKALMGGKALPSRVLI KTRRSQPPVWSSDFRALSPECVEAFLAEGVELVGVDVPSIDPADSEELLAHRIALSRGLT VMENLDLSAVMAGSYELIALPLPLEGVEASPVRAVLRSIP >gi|319803896|gb|ADMF01000036.1| GENE 17 17088 - 17543 521 151 aa, chain + ## HITS:1 COG:RSp0038 KEGG:ns NR:ns ## COG: RSp0038 COG0824 # Protein_GI_number: 17548259 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Ralstonia solanacearum # 6 136 5 133 136 84 32.0 6e-17 MAHKVFEKPIRVHFSNCDPAGIVFHPQYFVLINELMEDFLEDVAGVGFIEIRRYGVGFPV VSVKTQFTKPSRPSDRLMGQVWVEKIGDKSIRFAFVLKDEAEERLRCVETSVCVKLTSDD QFVSWSIPAEIREALAPYVVESESEFLQIRA >gi|319803896|gb|ADMF01000036.1| GENE 18 17554 - 18369 571 271 aa, chain - ## HITS:1 COG:PA4662 KEGG:ns NR:ns ## COG: PA4662 COG0796 # Protein_GI_number: 15599857 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Pseudomonas aeruginosa # 7 263 8 257 265 179 43.0 5e-45 MSSNRPIGILDSGFGGLSVARAIRAAIPNEDLVFAADCAYAPYGDNSSEYIQARLEHVVS FLLAQQVKALVFACNTATAVGIRAFRARLSMPIIGIEPAVFPALRHTRTGHIGVLATCRT IESQKYADVRHRAIEWAEVSRPMPVTVWDVPCPGLMECVERGDFDSANVHELLVRYVDPL TAHNVDEIVLGCTHYPFLANAIAKHAPKATLIDPAPAVAQQLERRLAALDLATPQTAPGT ERFFASGADAAREAVLRTLWSDPRVRLYEMD >gi|319803896|gb|ADMF01000036.1| GENE 19 18366 - 19280 767 304 aa, chain - ## HITS:1 COG:PA3605 KEGG:ns NR:ns ## COG: PA3605 COG0697 # Protein_GI_number: 15598801 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 2 298 8 299 308 70 28.0 4e-12 MIPKALVGQSALLPFLALIAATGFWGSSFITVARTLESTDPFTLVFLRFGVGALLVALWL RGRIFRIPLETWKMGAVCAVVIYASYLFNHIGLMTILSSTSGFLTALYVPITPFLFWAIA GRRPELCAFAGAAVAFGGLVLLADPFNLEFSSSWGEWTTIFSAFLSALEIILMGRFAPHC KAPEIAFAQIALVALFALAGTAVAHFCAPAVGWTLTPTALDLNLVFGVVWLAVILTCAQL LLAWAQKYVPPAQAAVIFALESIFAAVIGWFAGERLGFLGLTGGLCIVLGILITEYPRIM GKTR >gi|319803896|gb|ADMF01000036.1| GENE 20 19277 - 19639 410 120 aa, chain - ## HITS:1 COG:RSc1391 KEGG:ns NR:ns ## COG: RSc1391 COG1393 # Protein_GI_number: 17546110 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Ralstonia solanacearum # 4 97 8 100 118 82 43.0 2e-16 MIDIYGIPNCGSVKKALQWARENGVDFVFHNFKTEAPSVELIDKWMDEIGAARLLNRSSQ TWKSLDPSVRTAAAENPAAIKQLLATSPLLIKRPVIVWADGQATCGVDEPEWNRRMETDK >gi|319803896|gb|ADMF01000036.1| GENE 21 19770 - 20816 884 348 aa, chain - ## HITS:1 COG:RSc0577 KEGG:ns NR:ns ## COG: RSc0577 COG0009 # Protein_GI_number: 17545296 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Ralstonia solanacearum # 7 348 3 330 336 198 41.0 1e-50 MPTAKTQSAAPVKPVDMAAIARAATILEAGGLVAMPTETVYGLAADADQEAAVTATYRAK GRPLNHPLIVHVASADDIPWWAEITPEAQKLADRYWPGPLTMVLKKKPRCGGWVTGGQDT VALRCPSHPWAHALLAAYGGPKHRGLTAPSANSFGRISPSTAQHVREDLGEKPAGKLDLI LDGGPCEFGIESTMINLSGSHPEILRHGVITRAMLEEVLDCPVPDAGADAPRASGRLKSH YAPKTRAELLPAAQLPERATELASEGIVLAVMGPQMLRALLPANAELAAFVEAPDDVLSY GASLYEALHELDHAFEGNDCTRGRILIAAPADTPEWAAVNDRLKRATA >gi|319803896|gb|ADMF01000036.1| GENE 22 20828 - 22021 1200 397 aa, chain - ## HITS:1 COG:RSc0576 KEGG:ns NR:ns ## COG: RSc0576 COG0026 # Protein_GI_number: 17545295 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Ralstonia solanacearum # 23 388 42 411 413 336 51.0 6e-92 MSEMKTLLPGATLGLLGGGQLGRMFSQAAARMGYHVAVLEPGKNSPAGEVSLKQITRSYD DAEGLQTLAQCAQAVTTEFENVPAKSLAALAALGLPTAPHADAVAATQDRNVEKSFIERA GVPTAPHQAVKRIEDIESLSDDLFPGILKTARLGYDGKGQARVHSKAEAKTAWESFGRVD CVLEKMLALKTEVSVIICRNAAGDTAVFPVCENHHRSGILAYTVMPARISAELASRAQEY AEKIAHALDYVGVLCVELFVLDGDKLIANELAPRPHNSGHATIEACSTSQYEQQVRAMAG LPLGDTTQIAPAVMLNILGDLWFDADDQPTTPPWTELLKMPGVKLHLYGKAQARRARKMG HVTVLGTNQAQALSRAHDAAKLLGLPFADELSAKEAL >gi|319803896|gb|ADMF01000036.1| GENE 23 22031 - 22570 578 179 aa, chain - ## HITS:1 COG:BS_purE KEGG:ns NR:ns ## COG: BS_purE COG0041 # Protein_GI_number: 16077710 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Bacillus subtilis # 16 161 2 147 162 186 67.0 2e-47 MADINECAECSAKTEQPLVGILMGSNSDWEVMKNAAQMLKDFGVPFEARVVSAHRMPDEM FDYAEKAAERGIRVIIAGAGGAAHLPGMLAAKCTLPVCGVPVPSKYLRGVDSLHSIVQMP KGVPVATFAIGEAGAANAALYAVQILALNNPELSSRLADFRVAQNAKARAMTLPVDELA >gi|319803896|gb|ADMF01000036.1| GENE 24 22720 - 23613 1194 297 aa, chain - ## HITS:1 COG:RSc0574 KEGG:ns NR:ns ## COG: RSc0574 COG0152 # Protein_GI_number: 17545293 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Ralstonia solanacearum # 2 292 3 298 302 397 65.0 1e-110 MSGLSKSHIPSLKQIYSGKVRDCYAVGEDKLLLVASDRISAFDVILGDPIPGKGKVLTAL TNFWFEKLKDVIPNHLTGIAPESVVKPEEVDQVKGRAVVSKRLKPILIECVARGYIIGGG WKDYLATGKVCGVELPAGLKQAQKLPEPIFTPAAKAELGTHDENIPYERVVEMYGEKVAS TIRNATLELYKRAAEYALTRGIIIADTKFEFGLDDDGNVLLMDEVLTPDSSRFWPADSYE VGTSPKSFDKQYIRDWLETQPWNKTPPAPKLPEEVIEKTADKYREALRRLTGTDIEP >gi|319803896|gb|ADMF01000036.1| GENE 25 23724 - 24140 516 138 aa, chain - ## HITS:1 COG:HI0335 KEGG:ns NR:ns ## COG: HI0335 COG0818 # Protein_GI_number: 16272287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Haemophilus influenzae # 19 128 6 115 118 110 54.0 1e-24 MTEPQQSASSAEALKGKRGLRRLINATGYSIKGIRAGLEHEAAFREEFLLAVILIPTALF LPVTLPEKALLVISVLLLLLVEILNSAIEAVVDRIGMEIHPLAGRAKDMGSAAVFFALLI LAAAWGLIALPALWALFF >gi|319803896|gb|ADMF01000036.1| GENE 26 24251 - 25315 1492 354 aa, chain - ## HITS:1 COG:RSc0573 KEGG:ns NR:ns ## COG: RSc0573 COG0191 # Protein_GI_number: 17545292 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Ralstonia solanacearum # 1 353 1 353 354 513 70.0 1e-145 MALVSLRQLLDHAAENGYGIPAFNVNNLEQVQAIMAAASSVGAPVIMQASAGARKYAGEA FLRHLIEAAVEAYPDVPVCMHQDHGQSPAVCMGAIRSGFTSVMMDGSLMSDGKTISTYEY NLETTRRVVEMAHSIGVSVEGELGCLGSLETMKGDKEDGHGTDAKMTREQLLTDPDQAAE FARETQLDALAIAIGTSHGAYKFTRRPTGEILSIDRVKEIHARLPNTHLVMHGSSSVPQE YLAEIREFGGDMRETYGVPVEEIQKAIKHGVRKVNVDTDIRLAMTAAIRRYLVENPSGFD PRAYLKAARKAAENLCRERYLAFGCEGQGAKIKPIPLEKIAALYADGTLRQHVL >gi|319803896|gb|ADMF01000036.1| GENE 27 25520 - 26926 1150 468 aa, chain - ## HITS:1 COG:RSc2539 KEGG:ns NR:ns ## COG: RSc2539 COG0860 # Protein_GI_number: 17547258 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Ralstonia solanacearum # 5 464 27 501 507 373 45.0 1e-103 MERRRLIAGAAGALLFSLAPCQIAWGAKLVNVRMWPAAEYTRVTIETDEPLKYKHFFVRS AKPLRLVIDIEGLALTERIKKLIAAVNPDDPYIQSMRIGQYKPGVVRLAMDLKTDVKPEV FLLKPFADYQYRLVFDIYPAHPKDEVGKILAGEADPNEDPLLSAMGGLSSDANEPDPLAD ILAGLNTPRETAKLPVKPADKTPSPKEPVRSAAAKPSDSKSTSSSAKKTGAAKSSNVITI VVDPGHGGEDPGAIGRRRTREKDVVLAIARRLVKLIGAEPGMKAVMTRNSDHFVSLGGRV AIARRVKAHLLVSIHADAWVKSNVRGSSVFALSQKGATSAAARWLAKNQNESDLIGGVNI ATVNKQVATVLVDMTSTWTIGYSLGLGAAVLDELRSINRLHKGKVEQAGFAVLKGQGIPS ILVETAFISNPTEEQLLKNANHQQKLAQAILTGIKKQLAADKTLVEQG >gi|319803896|gb|ADMF01000036.1| GENE 28 26908 - 27426 467 172 aa, chain - ## HITS:1 COG:NMB0457 KEGG:ns NR:ns ## COG: NMB0457 COG0802 # Protein_GI_number: 15676368 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Neisseria meningitidis MC58 # 22 161 15 151 153 120 46.0 1e-27 MSTPSLFTVELPLPDDTDRLGAALADVLIALRPQIDASESGLAMRLEGDLGAGKTSLVRA MLRRLGWTGAVKSPTFTLLETYEAGGLKVNHFDFYRFETPEEFEDAGFADLYAAGTVCAS EWSSKAAPFVPAADLTVSLAVEGYGRAVQVEAHSNLGHEILRRWEAQWNGAV >gi|319803896|gb|ADMF01000036.1| GENE 29 27887 - 28564 727 225 aa, chain - ## HITS:1 COG:no KEGG:CLL_A0339 NR:ns ## KEGG: CLL_A0339 # Name: not_defined # Def: cyclic nucleotide-binding domain protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 222 1 218 224 85 24.0 1e-15 MLQPRYLFTQDFSVFRTALLSLPHRVRRFERGESLWAAGTPFEKIFFFDSGLARTSIISV SGSNRVIAWQGPGTMFPVIHRNRFEIETRHLTEAVTAVAALEFSAVDIEAYLRGSADFAL ATIDWYAKFVNLLLYSAADVSTSPNTLTALASTLLLLFRNEAGAVMATNNLLKITQSELA ALLGVDRASLVRALSALRKKGAVATLRGAIKLLSPEILQQAAARS >gi|319803896|gb|ADMF01000036.1| GENE 30 28594 - 28950 311 118 aa, chain + ## HITS:1 COG:no KEGG:Sterm_1353 NR:ns ## KEGG: Sterm_1353 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 113 1 111 113 172 68.0 5e-42 MHKVRITILKTTFDSELAREYGAAGLGPCPMMKSGQVFYADYAKPDGFCDEAWKAIYQYV FALAHGSGKDLFYFGDWIRKPGVAIVSCNDGLRPVIMKLEATDIPSKLDYEPVLHSHS >gi|319803896|gb|ADMF01000036.1| GENE 31 29241 - 31772 2478 843 aa, chain - ## HITS:1 COG:no KEGG:Rpic_0766 NR:ns ## KEGG: Rpic_0766 # Name: not_defined # Def: protein of unknown function DUF748 # Organism: R.pickettii # Pathway: not_defined # 16 732 54 768 1260 187 25.0 2e-45 MAKVLTFTACAAAVGVALYAAAGYVGVPYAVRTVIEKNVSELLNRTVTLDDVRFNPWTWA FELRGLTIPEEGSDPLLSLGLLRIDASSQTLFKLAPVLDEITIDGLKVNAVVNEKNRREL EKLLGGNDADKATQTAAKSADSSDAGLPQFALYNITVANSSLRYQDKSQGIDESLTDLSV KLPFVSTMESARESLVTPALSLKLNGSAIEASGTTKPFGKSLEAQLNLKVQRLDAARLAR ILPQLRTRELTVAGADLSSDINFIFRNPTGGQPAKMLLSGTTSLDNVSITQDGKAIITLP KASVTLKEVDLTAQKAVVQNIVATGLTINASQSKTGINLLRAVDSAAGAASSQANTAAAA PKDAGGNAGSSVWNWTVASASLRDGALNWHDSTVSPAAAVSVKNIDASVKNLSSAAGEKS SFNLSLETLGGKLSAAGTATIAPLSVEATAKGSNLSPAAAAPYLKAFLKPSLTLTAGFDL TGAYDGKDAKASGTVNVANFALKEGKTTLASVKSAAVKLSEFSTASRTAKVESIAVVQPT AYAVMTKSGLNLSQLTVETKPSTAKKTSKEETAKTNAAEPAWNWSLGQATVTNGSLKYRD ESISPAASVEIPKINAALKNVSSKSGTKSSVDFSADLGGGSLTAAGNFVLAPLSADIGVK GANIGLKSFSNLMQGYAGLGAKSGTLEADGRATVRTQKEQNVFGWKGNASLASLDLTNAK GTSLMSWTKAALTGMDVETTDPIKLIIAKAEIDQPAEKQTKVLKEAAGVASLISSLMGKD KTAQKIQKYSDKVPTKISLQNIRYENGKLSAAGISSASIEGLILQKLSDAMGEKLGGSTT SAK >gi|319803896|gb|ADMF01000036.1| GENE 32 32021 - 34264 2116 747 aa, chain + ## HITS:1 COG:AF1203 KEGG:ns NR:ns ## COG: AF1203 COG0243 # Protein_GI_number: 11498802 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Archaeoglobus fulgidus # 47 735 43 722 741 222 28.0 2e-57 MTISVSRRAVLKGTGAGFAASLFMHTAPTLAAETQAHSGDNEWTGYTICDSCNHMPMCGI TFHAKGNTVIRIENWKEHPNHFLCSKGIATLQRLYNPNRLLYPLKRTNPKGSEDPGWVRI GWDEAIKMVAANLNAVKAKYGADRVLFYCGDPKEPRPPVMRLARYFESPNYGCESSVACN LAYVHAEELSYGQEIAGGPSPKTKCVMIVGKNGSWASPHGFFRNLLAQKARGIKLIVSDI RRTKVAEQADIHLQPKPGTDGALAWGMIRVLVKEGLVNQPFIDQWCTGYEELVRYAEKFT PDYVEKETGVKAEDVIAAARMFADGPSAMMLPGQSIPHQHNGCNNVRAYSLLMALTGNVD NVGGSSFDDWPKDYIRWDEGYTRTFIDQQWFNQPEQKAKRIDREFAPIWNEMQVLCSPNA LPEMVKAGRIKAFAGFGANLLIWPDPAEYQEAVRNLDFSFATDYFYRDETHHDMDLVLPA AMNYERYAPFGVHGRKVSARKPVKPLGECWEDWKIALTIGAAVTGDSDRFFGGDPVKACD SMLNDWGTSYAERQAMLPNVNVCEWFPAPQKEKFAKGLLRFDDKPGFRTPSGKIEFFSSI QAKHDQPGLPVYVEPPKPTKDYPLKLINGTRRPYITHSKTRGDQPYLLELEPESVINMHP KDAQDRGLKEGDRVWMISPYAATKVRARVRVTILCQPGMVDAQYGWRGDQETQVMIPRKN WDPISGYPCCNDVCIEVVKADEEKKSA >gi|319803896|gb|ADMF01000036.1| GENE 33 34279 - 34914 552 211 aa, chain + ## HITS:1 COG:AF0175 KEGG:ns NR:ns ## COG: AF0175 COG0437 # Protein_GI_number: 11497792 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Archaeoglobus fulgidus # 1 198 1 230 251 124 34.0 1e-28 MSRFGIIVNVDKCVGCHACAIACKEENQVAPGIFYERVERFENIAANFINWFRVSCMHCD KPACMPVCPVKAIHRGPAGEVLVDQKKCIGCRMCERACPYGAPKFNASGETNYFGGKTPL AIRELEPWQRHAAGRAEHCTLCTHRTSQGRPPACVEACGIGAMTWVDFDAPAPEAEKLIA AAKPMNAAAGTEPKIRYVGRHLDAAAMSPRV >gi|319803896|gb|ADMF01000036.1| GENE 34 34993 - 35646 560 217 aa, chain - ## HITS:1 COG:no KEGG:DSY0530 NR:ns ## KEGG: DSY0530 # Name: not_defined # Def: uncharacterized component of anaerobic dehydrogenase # Organism: D.hafniense # Pathway: not_defined # 81 208 67 210 226 69 34.0 8e-11 MLVRDNNGLHYPLSFYAPMSLHSFPSDNEAAYIRLYPVLDALSLLFLQPENLGASDALVD AGDALLDEEGISAETRERIGAVVPPQDIEIAQAYARLFLGSGAKTIPLCESVWTSPQHLL CQGSELECRKAYADAGLELTSGPVVPEDHLGLMLAFLAVTAMRAEAPKGLEFYAEHPAKF VPNLVEAIYAMGNTAGPYLGIAAMLMGIHELLMPKSA >gi|319803896|gb|ADMF01000036.1| GENE 35 35689 - 36270 438 193 aa, chain - ## HITS:1 COG:PAB1763 KEGG:ns NR:ns ## COG: PAB1763 COG0778 # Protein_GI_number: 14521107 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pyrococcus abyssi # 4 185 3 194 196 79 33.0 5e-15 MKSISLPAPAVLSAPLKEALSLRRTNRECSSEALTDAELAALLWASAGITADDGRRTTPS TLDLRAVSPYVLRKDGVWRWDAAQNKLEQLASEDVRKVSTAYQFEYVEKAPVTIAFVVDT ERAKTARPTGPYVDAGTMGQSCYLAAASLGLAGCIRASFDHDELRKAMNLDERFEPIVLF TCGRPLSFNSNSR >gi|319803896|gb|ADMF01000036.1| GENE 36 36304 - 36597 209 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCGLCLEDAAHLEGLPVKLSENLPTRQACPWGDDVAPTPPASAAYLMLSGGCIHTRTQIA QRILRRAASIMLRRLDAVRERLAESSALESLLTARNS >gi|319803896|gb|ADMF01000036.1| GENE 37 37343 - 38791 1505 482 aa, chain + ## HITS:1 COG:BH2308 KEGG:ns NR:ns ## COG: BH2308 COG1288 # Protein_GI_number: 15614871 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 9 479 11 466 470 296 36.0 7e-80 MPKQDLPQSAQKKKNFKMPDIYIILGIFILLMAVLTYIVPSGQYDRHVVETVHGVQNLVV ANTYHAVEPHPAGWLEIITAIPYGFERAAGIVVLTFMVGACMGLIKRAGLIDLGVQRLSR AVGQSEFLVAPVLMLVLSLLAAFIGVPELSLAYLPVFLPLFYRLGYDGMTATAVALLSPC MGFTFGITIPGSVGMGQQIAQVTMFSGSGLRAVVLAVVILISIVYVMVYAARVKKDPQKS LTYDTDIEVKEKLAAEEGEKSGNRELVFTSRQTWAGISCLIMFPFAVYLILSMNLGFEAI GGLFLTIGIIAAIIAGKTAQEICDDINAGMRDLMVGALLCGVASAIAVVMDKGVITDTIV YWLEQLLATTPPALSAIAIFWEQAIFNALIPGATALTILTMPILSPLGSLLDVSQQAIVS ANAWGGQLTDIFFPTSGFFVATLVIAKVEYTKWLRFYTPLMLVLGAVCCAALYLQQQFNL NF >gi|319803896|gb|ADMF01000036.1| GENE 38 38812 - 40167 801 451 aa, chain + ## HITS:1 COG:STM0523 KEGG:ns NR:ns ## COG: STM0523 COG0044 # Protein_GI_number: 16763903 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Salmonella typhimurium LT2 # 2 446 3 446 453 474 52.0 1e-133 MFDLIIKKGMAVLPDAVEMVDIAVKNGVIAAMAPTIDERAAREINALGQYVLPGMVDVHM HLSEPGRTEWEGYRTGTQAMAAGGITSFAEMPLNQIPCTTDVPSLEIKLKAAEGQCWVDY APMGGLVPWNLKDLAPLADAGVAVFKAFVATCGSGKPGDFKNVTDFELFRGAREIAKKDG LLIVHCENATITDGLGAEARSAGETSLSAYVASRPIFTEVEAVHRVLMIAEAAGCRIHIA HCSCPEAIEEVERAKARGVDASFESCPHYFLLATEDLDAIGPKAKCSPPIRDRAHQRRMW ELLGDGRIEMLVSDHSPCTFDLKASPNAFDAWGGISGCQNCVDAMFDEAVLKRGISPVVL ARALASNAARRFRLKGKGEIALGMDADLTFIDPSQTYVLTADHLLYKNKFSAYEGRKIGC RIVRTLVRGEEVWSLQNGPSARPIGRRMPIG >gi|319803896|gb|ADMF01000036.1| GENE 39 40444 - 41859 1029 471 aa, chain + ## HITS:1 COG:YPO1083 KEGG:ns NR:ns ## COG: YPO1083 COG1953 # Protein_GI_number: 16121384 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Yersinia pestis # 16 470 20 475 494 483 54.0 1e-136 MKDKIDMAADIPQSILANKDLIPSQQTWSWYNIFAFWMSDVHSAGGYIFAGTLFSLGLAG WQVFISLIAGILIILVLANIIGVPSQKFAIPFPVISRMTYGVFGSNIPALIRGIIAIVWY GIQTYLASAALMVVVLYEFPSLISYHESSYFGLSPLGWGCFLVMWLLQTALFLCRMEAIR RFMDWAGPIVYLAMLGLMVLIVGRAGWENISFTLSETEMSVSQTAWTMLLGAALVVSYFA GPTLNFGDFSRYAKTISDMKKGNFWGLPVNFLFFSLISVVTISGTRAVFGELIVDPIAVM GRLDNKAAVLLLGLTMLVATVGVNIVANFVSAAFDISNIFPKYISWRKGGMLASIVSVLI LPWNLFSSPEVIHLTVDLLAALIGPVYGILIVDYYLVKRGKISVADLYSTSSTSLYWYRH GVNWQAVGALLPAGAASILVMLLDNGTGWANFTFFIGGILAAAIYLCIARR >gi|319803896|gb|ADMF01000036.1| GENE 40 42289 - 43062 915 257 aa, chain + ## HITS:1 COG:ylbA KEGG:ns NR:ns ## COG: ylbA COG3257 # Protein_GI_number: 16128499 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in glyoxylate utilization # Organism: Escherichia coli K12 # 1 257 7 261 261 239 49.0 4e-63 MSGYPQDLLSNRSVVKSDFAIITPQGRVINTIPGIVDAKMTILCSPKIGAGFVQLIGTLG PDARTEYPYATLPHEESFLYVLDGEIELEADVAGEKKNLTQGGYCYAPAGKGIGWRNVNG KVGRILLYKQRYIPHPQGLEPWTVFGNINEIAFRDYDEMANVHVKDFLPVNEAFDMNMHI LSFDPGASHNICETHVQEHGAYIYEGEGTYLLDDTWYLTKKEDFLWMGAFSVQAAYGIGR GPFSYIYSKDCNRDVEI >gi|319803896|gb|ADMF01000036.1| GENE 41 43066 - 43182 67 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFNNHSAAGAIRERNRSKVSDLAVGESRTQGADDEMSV >gi|319803896|gb|ADMF01000036.1| GENE 42 43204 - 44232 988 342 aa, chain + ## HITS:1 COG:PH0720 KEGG:ns NR:ns ## COG: PH0720 COG0540 # Protein_GI_number: 14590597 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Pyrococcus horikoshii # 22 341 4 307 308 176 37.0 6e-44 MALDQNFKHLDIREALENTHMRGRNITFLDDFSRNEIHSLFQAAKMLEPFMRTGTDLLKG KVLYTLFFQPSTRTRCSHENAMHRLGGSVITEADPTHNSSVAKNESLADSLRVTSEYADV IVMRHPDDKEALGALKEIEGHCSPVISGGYGHVTHPTQGLLDSYTCWRAFGDLSKVTVAI ATPDLSRARSGQSFALALAAMGAKIIYTGTSELRTPEVVRQKLIKMNANFEEHFDLTMKQ NEELYAEKNIDLIYLPGCSVKKDDPNRADFEKKMANYYVSLEMLRNIKAKTGKTVGVHHS LPRNPGEFDFGIDNTEHQLYFRAIGFSVALRMALLAAVVGVN >gi|319803896|gb|ADMF01000036.1| GENE 43 44397 - 45323 966 308 aa, chain + ## HITS:1 COG:HI0595 KEGG:ns NR:ns ## COG: HI0595 COG0549 # Protein_GI_number: 16272538 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Haemophilus influenzae # 1 307 1 308 310 405 64.0 1e-113 MRLVIALGGNALLKRGEPMLCENQRENVSLACRQIAKAYAGNELVVTHGNGPQVGLLALQ NNAYKKVPMYPLDVIGAESVGMIGYMIQQELVNYVPKTATLATILTQTQVDPNDPAFEHP TKPVGPVYEKEEAEQLAKQHGWTIAPDNDKWRRVVPSPDPKRIWGLAPLKTLVENGHIVI CCGGGGVPTYFDKNGRLVGAEAVIDKDLASSVLAASLDADLFIIATDVDGAYINWGKPDQ KKIVQADPKSLREFGFAKGSMGPKVEAACRFVERTGKTAVIGALSEIEKILAGESGTRVV KEEAVVYG >gi|319803896|gb|ADMF01000036.1| GENE 44 45473 - 46564 644 363 aa, chain + ## HITS:1 COG:PA3215 KEGG:ns NR:ns ## COG: PA3215 COG2207 # Protein_GI_number: 15598411 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 27 362 5 336 337 144 28.0 3e-34 MSTQSLERSPAEVVPMDDDQLLPLGDSILASWIRSICQTVRGYGVSPEAIFERIGMDPTL LTVPDARYPAMTVRRFWEAVISATGDELIGLTCGQEMQAPTLHGLGLAIMTSHSLAQVLE LTASYGKVISTTMDMSLAHNASSSSLSLRTLHGNEAKQAALLCVIAFIQRQANSLSQHRV TPVEVGVQINNCSANDRKRLEDYFGCSVDTESPQGWFIRYSYHDVMEPYAAQNAMLREAN EQIVRQYLNRVRQYSFTVRVEEEIEELLKAGESARIQAVAARLNMSSRTLQRRLEGERTI FMQLVDKHRKQLAHDALAHTERSITEIAYTIGFSDPSNFSRTCARWFGCSPAAYRRRIRQ LPT >gi|319803896|gb|ADMF01000036.1| GENE 45 47048 - 47734 511 228 aa, chain - ## HITS:1 COG:NMA0828 KEGG:ns NR:ns ## COG: NMA0828 COG0546 # Protein_GI_number: 15793799 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Neisseria meningitidis Z2491 # 17 223 6 213 220 116 33.0 4e-26 MGVFLYMECRMTQRLFLFDLDGTLVDSAPDLAGAMNEMLAARGLPERPLEELREPSGHGG PALLKAAFGMERTDPRFEAMRQEFLERYAARATRSSTLYPNVVQMLDRLTAAGVKLGVVT NKPQGLAEIVCEHLGLTPRMTVVVGLGPAGTALKPKPDSLIYALKLAGAKAADALYAGDS NSDGLACQPIGLPAAWVSWGCQKTPPDSGIFDYIADEPAQLVEWALFR >gi|319803896|gb|ADMF01000036.1| GENE 46 47796 - 48464 849 222 aa, chain - ## HITS:1 COG:RSc0900 KEGG:ns NR:ns ## COG: RSc0900 COG2885 # Protein_GI_number: 17545619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 31 221 38 217 218 144 47.0 1e-34 MKSSKLCGIAAALLLAATGASAADAVNPYVHSSSGQVVKNSTDLCWRTGFWTPALAEAMG IDGAGCACDADILDKKACTAVEAPAPQQKSAEKVTFSADTLFNFDKATLKDEGRAVLDDL VSRVAGVDLEVILTTGYADRIGSDAYNLKLSQRRADAVKAYLVQKGVDAALIKSEGKGEA DPVVNCPNPSKAGQVKTFKELVQCLQPNRRAVVEVVGTRPAN >gi|319803896|gb|ADMF01000036.1| GENE 47 48664 - 49989 1332 441 aa, chain - ## HITS:1 COG:XF2472 KEGG:ns NR:ns ## COG: XF2472 COG0402 # Protein_GI_number: 15839062 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Xylella fastidiosa 9a5c # 7 440 2 431 435 379 46.0 1e-105 MELIDTLIEARWIIPIVPKGVILENSALAVNAGRIVDILPIETAEKTYQAQQVFRFPTSA LLPGFVNLHSHAAMNLVRGLGADLPLMDWLTKEIWPAEGKLMSPEFVAEGSWLAGLEMAA GGVTTTSDHYFFPKSAAEGLLRAGLRCAVSGIVIGFPSAWAKNDTEYLSLSEALIQEYEG DPFVHTTIAPHAPYTVNDAALKRCAEISDKYGVPIHMHVNETAVEVSDSLRDHHERPIDR LERLGLLNERLIAVHSVHASDEDITKMAAAHASVCHCPCSNLKLASGFAPIAKFLKAGIN LGIGTDGAASNDKLDMLGETRLAAMLAKAVAQDPTAAPVFAMLEAATLGGARALRWDADI GSLEIGKAADLFAIDLGTPESLPVADPAAQILYSAGRECITHTWVDGRLIMEKHARAAYP QTDALAAAALCAQKWQSRLKN >gi|319803896|gb|ADMF01000036.1| GENE 48 50216 - 53128 3406 970 aa, chain + ## HITS:1 COG:RSc0901 KEGG:ns NR:ns ## COG: RSc0901 COG0188 # Protein_GI_number: 17545620 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Ralstonia solanacearum # 67 936 2 881 885 935 56.0 0 MDEEKKTQGEEIPGKAEAEGPAAEDRRTTDTPDVQTDAPQTAQTNAAPEDESEDDEGGEG RHGASGDSIANELLPVSLETEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMKEI GNVWSSPTKKAARVVGEVLGKFHPHGDSAAYQTIVRMAQDFSMRYPLIYGQGNFGSIDGD SAAAMRYTEVKLMKIAEEMLADLHEDTVDFVPNFDNSEVEPVVLPTRLPELLVNGSSGIA VGMATNIPPHNLRETIDACVHALEHPDCSVDDLIALISAPDFPTGGIVYGLSGVYEGYRT GRGRVIMRARTHLEEFGRDHSRTRIVVDEIPYMVNKRVLYERMHELWRDKKLDGISEMRD ESTRQIRIAIDLKQGAMPEVVLNNLFKNTQMQESFGMNMVALVDGQPMLLNLKQMVVYFL EHRREVVTRRTIFRLKKSRGAGHILAGQAIALANIDEFIRLIRAAKTVEEAQQSLMGRGW PLGFAAEITRRAAEYGKDADPEGLDPRRGLQPDGLYYLTKVQVDNILAMNLRRLTGLERE KILADYAATMERIFDLIDILHKPERVTAIIKEELLACREAYGDERRSTIDLSEDTNFNKR DLIPRRDMVVSLTRDGFVKSQELADYNAQSRGGKGRNLQATTRDDVIEAFFLANTHDIIL CFSTAGQVYAIDVFDLPEGKANSRGRPIVNLLPLEENEKISFILPIQEFSEDRYMFLATD RGTVRRTPLSAFSSARRGIRATNLGDEKLVGVTITSGDDDVFLLADNGRCVHFKESTIRV MGRTAHGVRGMRVKADESVVALASTNDMTQAFLIATEHGFGKRTALAAYPLRNRGGKGVI AIRVIEKNGAPVSGVIVKPEDDIMLLSTGGKVVRTRAGEVPERGRNTVGNILIRMPDDTL AAVRRVDRTGEEDESEIEHLNVEIDPDDAGDLPDTDDLDDIDDDEVDEGDDAEEADSSEE VIPPKDPKQN >gi|319803896|gb|ADMF01000036.1| GENE 49 53229 - 54335 1056 368 aa, chain + ## HITS:1 COG:ECs0990 KEGG:ns NR:ns ## COG: ECs0990 COG1932 # Protein_GI_number: 15830244 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Escherichia coli O157:H7 # 1 361 1 362 362 320 44.0 2e-87 MTRPYNFAPGPAMLPESVLKQIQSEMLDFHGCGWSILEASHRGPQVTGVMTELKSRLRQL LSIPDTYDVLFCPGGGRMQFAMVPMNLLGAGTLSTYIITGAWSKAAAKEALRFGRVQSAF SGSGNRIPADEELEVIPETSYCAYCDNETIHGIEFERVPVLKDAEAVPLVADMTSNFLTR PVDVNKFGLFYASAQKNLGIAGLAVIVLRRDLLGLAGTEVPTLLNYSVYSRTDSVPNTPP VFQLYVANLMAQWIEAHGGVAVMDEYARARAKIVYDAIDAMPEMYVSHVERESRSRVNAV FRLKDEALTALFVKEAAEAGLANLAGHRAVGGIRASMYNAMPIEGVQKLADFMKTFAHRH GRTQLAVN >gi|319803896|gb|ADMF01000036.1| GENE 50 54356 - 55012 774 218 aa, chain + ## HITS:1 COG:RSc0908 KEGG:ns NR:ns ## COG: RSc0908 COG0283 # Protein_GI_number: 17545627 # Func_class: F Nucleotide transport and metabolism # Function: Cytidylate kinase # Organism: Ralstonia solanacearum # 4 217 11 224 230 214 58.0 9e-56 MTVPVIAIDGPAASGKGTIAQRAADALGWHYLDSGALYRLAALAALRAKVSFDDPAALTA AAQSLAPQFKDGRIWLDGEDVSEAIRAETVGVAASKCAAVPGVRQALFDLQRRAAAAPGL VADGRDMGTVVFPEAKLKIFMTASARVRAERRVKQLEARGEKADLAALTRDLEERDRRDR ERAVAPLKPAADARLLDTSEMGIDEVVKKVLGWWAELN >gi|319803896|gb|ADMF01000036.1| GENE 51 55127 - 56845 2303 572 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|187924977|ref|YP_001896619.1| 30S ribosomal protein S1 [Burkholderia phytofirmans PsJN] # 1 570 3 573 577 891 77 0.0 MLFIHSTMSNETNKPESFAELFEQSLASQEMRQGEVITAEVVRVDYNFVVVNAGLKSEAY VPIEEFKDDKGEVTVQPGDFVSVAIESVENGYGDTILSRDKAKRLAAWMNLEQALESGEL VTGTVTGKVKGGLTVMTNGIRAFLPGSLVDTRPVKDTTPYEGKTFEFKVIKLDRKRNNVV VSRRAVVEANMGEERAKLLETLQEGAIVKGIVKNITDYGAFVDLGGIDGLLHITDLAWRR VRHPSEVVQVGQEITAKVLKFDKEKCRVSLGLKQLGEDPWIGIARRYPKGTRLFGKVTNI TDYGAFVEVEAGIEGLVHVSEMDWTNKNVDPRKVVQLGEEVEVMVLDIDEDRRRISLGMK QCKANPWEEFAQSHKKGDKVSGQIKSITDFGVFIGLPGGIDGLVHLSDLSWNESGEDAVR NFKKGDEVEAVVLAIDTERERISLGIKQLAGDPFGTFASTHEKGSVIKGTVKTVDAKGAV IDLGNDVEGYLRASEIAADRVEDATTVLKEGQEVEAAVISLDRKNRSIQLSIKAKDAAEA RDALDRLNASDVGSATGTTNLGALLKAKLEQK >gi|319803896|gb|ADMF01000036.1| GENE 52 56867 - 57175 414 102 aa, chain + ## HITS:1 COG:RSc0910 KEGG:ns NR:ns ## COG: RSc0910 COG0776 # Protein_GI_number: 17545629 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Ralstonia solanacearum # 5 97 1 93 138 93 55.0 1e-19 MGNSMTKSELLAELYGRLPTFRERDCMDAAGVIIDTMSQTLVEGGRIEIRGFGSFGLKYR PERVGRNPQDGSAVAVRARYTVFFKAGKDLRQRVDASRDSKL >gi|319803896|gb|ADMF01000036.1| GENE 53 57540 - 57888 202 116 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEKL Prediction of potential genes in microbial genomes Time: Sun May 29 20:24:26 2011 Seq name: gi|319803839|gb|ADMF01000037.1| Sutterella wadsworthensis 3_1_45B cont1.37, whole genome shotgun sequence Length of sequence - 66481 bp Number of predicted genes - 53, with homology - 47 Number of transcription units - 36, operones - 11 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 29 - 280 104 ## - Prom 300 - 359 6.7 + Prom 559 - 618 2.7 2 2 Tu 1 . + CDS 770 - 2578 2292 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 2590 - 2633 7.3 + Prom 2623 - 2682 1.9 3 3 Tu 1 . + CDS 2899 - 4404 1757 ## COG4690 Dipeptidase + Term 4493 - 4541 13.9 - Term 4479 - 4527 10.1 4 4 Tu 1 . - CDS 4600 - 4968 412 ## - Prom 5023 - 5082 3.2 + Prom 5265 - 5324 2.7 5 5 Op 1 . + CDS 5486 - 6865 686 ## gi|253581677|ref|ZP_04858901.1| outer membrane autotransporter barrel domain-containing protein + Prom 6885 - 6944 1.6 6 5 Op 2 . + CDS 6997 - 8592 1519 ## Dvul_2968 outer membrane autotransporter + Term 8630 - 8674 13.2 - Term 8722 - 8763 10.5 7 6 Op 1 3/0.000 - CDS 8787 - 9680 1147 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 8 6 Op 2 3/0.000 - CDS 9714 - 10625 1078 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 9 6 Op 3 . - CDS 10734 - 11762 743 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 11922 - 11981 3.4 10 7 Tu 1 . - CDS 11987 - 12793 1004 ## COG0428 Predicted divalent heavy-metal cations transporter - Prom 12821 - 12880 4.2 11 8 Tu 1 . + CDS 13102 - 14310 1667 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Term 14368 - 14415 7.7 - Term 14311 - 14358 2.2 12 9 Tu 1 . - CDS 14443 - 15072 441 ## - Prom 15177 - 15236 2.4 - Term 15159 - 15200 11.3 13 10 Tu 1 . - CDS 15253 - 17373 2667 ## COG1042 Acyl-CoA synthetase (NDP forming) - Prom 17511 - 17570 3.3 14 11 Tu 1 . - CDS 17673 - 19577 1983 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 19720 - 19779 2.5 + Prom 19640 - 19699 5.3 15 12 Tu 1 . + CDS 19756 - 20682 422 ## COG0583 Transcriptional regulator + Prom 20794 - 20853 2.3 16 13 Tu 1 . + CDS 21083 - 21946 1335 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 21998 - 22041 1.6 17 14 Op 1 . + CDS 22142 - 23377 1182 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 18 14 Op 2 32/0.000 + CDS 23413 - 24438 1043 ## COG1135 ABC-type metal ion transport system, ATPase component 19 14 Op 3 . + CDS 24438 - 25118 853 ## COG2011 ABC-type metal ion transport system, permease component + Term 25352 - 25397 7.9 + Prom 25319 - 25378 3.2 20 15 Tu 1 . + CDS 25443 - 25670 78 ## - Term 25704 - 25748 4.4 21 16 Tu 1 . - CDS 25772 - 26218 390 ## + Prom 26743 - 26802 2.4 22 17 Op 1 . + CDS 26828 - 27718 1227 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 27722 - 27753 2.7 + Prom 27761 - 27820 3.1 23 17 Op 2 . + CDS 27844 - 28800 1181 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) + Term 28846 - 28908 21.4 - Term 28842 - 28885 8.1 24 18 Tu 1 . - CDS 28955 - 30442 1708 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 30521 - 30580 4.2 - Term 30582 - 30621 -0.6 25 19 Tu 1 . - CDS 30720 - 31565 669 ## COG2904 Uncharacterized protein conserved in bacteria - Prom 31627 - 31686 1.6 26 20 Op 1 3/0.000 - CDS 31689 - 32651 978 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 32695 - 32754 2.6 - Term 32842 - 32885 6.4 27 20 Op 2 5/0.000 - CDS 32931 - 34199 1075 ## COG0477 Permeases of the major facilitator superfamily - Prom 34227 - 34286 3.6 - Term 34232 - 34273 -0.8 28 20 Op 3 . - CDS 34332 - 35417 635 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 35551 - 35610 4.2 - Term 35759 - 35798 -0.6 29 21 Tu 1 . - CDS 35819 - 36109 360 ## BDP_1620 hypothetical protein - Prom 36217 - 36276 8.2 + Prom 36219 - 36278 7.0 30 22 Tu 1 . + CDS 36299 - 36691 257 ## COG1733 Predicted transcriptional regulators + Term 36755 - 36785 2.0 - Term 36616 - 36652 3.0 31 23 Tu 1 . - CDS 36748 - 37707 958 ## COG1275 Tellurite resistance protein and related permeases - Prom 37755 - 37814 2.7 + Prom 37836 - 37895 2.4 32 24 Op 1 . + CDS 37919 - 38923 721 ## COG2819 Predicted hydrolase of the alpha/beta superfamily 33 24 Op 2 . + CDS 39002 - 39829 435 ## COG0266 Formamidopyrimidine-DNA glycosylase 34 25 Tu 1 . - CDS 39889 - 43947 3283 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 43985 - 44044 4.4 - Term 44017 - 44063 11.0 35 26 Op 1 . - CDS 44150 - 45454 1520 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 45548 - 45607 2.1 36 26 Op 2 . - CDS 45632 - 46045 657 ## - Prom 46128 - 46187 3.0 37 27 Op 1 22/0.000 - CDS 46221 - 47360 1215 ## COG0842 ABC-type multidrug transport system, permease component 38 27 Op 2 45/0.000 - CDS 47379 - 48554 1159 ## COG0842 ABC-type multidrug transport system, permease component 39 27 Op 3 10/0.000 - CDS 48551 - 50410 1102 ## COG1131 ABC-type multidrug transport system, ATPase component 40 27 Op 4 . - CDS 50403 - 51410 903 ## COG0845 Membrane-fusion protein - Prom 51435 - 51494 3.7 - Term 51505 - 51553 2.2 41 28 Tu 1 . - CDS 51716 - 52687 1298 ## RB3532 alkaline phosphatase PhoA (EC:3.1.3.1) + Prom 52852 - 52911 2.7 42 29 Tu 1 . + CDS 52979 - 53485 530 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 53621 - 53671 3.5 - Term 53307 - 53336 0.4 43 30 Tu 1 . - CDS 53551 - 54891 848 ## Clim_0237 HipA domain protein - Prom 54969 - 55028 1.8 44 31 Tu 1 . - CDS 55058 - 55372 142 ## Caul_5343 XRE family transcriptional regulator - Prom 55392 - 55451 6.7 - Term 56416 - 56454 9.3 45 32 Op 1 1/0.000 - CDS 56520 - 57443 1066 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 57495 - 57554 3.9 - Term 57519 - 57558 8.2 46 32 Op 2 . - CDS 57586 - 58317 880 ## COG3314 Uncharacterized protein conserved in bacteria - Prom 58413 - 58472 3.3 + Prom 58506 - 58565 2.8 47 33 Op 1 . + CDS 58596 - 59504 570 ## COG4912 Predicted DNA alkylation repair enzyme 48 33 Op 2 . + CDS 59571 - 60110 764 ## COG1970 Large-conductance mechanosensitive channel + Term 60137 - 60177 6.6 - Term 60125 - 60165 6.6 49 34 Tu 1 . - CDS 60240 - 61157 1190 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 61249 - 61308 5.4 50 35 Op 1 16/0.000 + CDS 61644 - 64253 2237 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 51 35 Op 2 8/0.000 + CDS 64274 - 64855 300 ## COG0437 Fe-S-cluster-containing hydrogenase components 1 52 35 Op 3 . + CDS 64852 - 65721 790 ## COG3301 Formate-dependent nitrite reductase, membrane component + Term 65912 - 65939 -0.8 53 36 Tu 1 . - CDS 66056 - 66481 301 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319803839|gb|ADMF01000037.1| GENE 1 29 - 280 104 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPRRSQPKRLRLPSSLPNEPV >gi|319803839|gb|ADMF01000037.1| GENE 2 770 - 2578 2292 602 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 94 602 1 481 484 197 31.0 7e-50 MMMRKLCLVAALTAAMTGFSAANAAAQLKDGTWTGEGQGRNGAIVVELTAAGGKITAVKV VKHSETPGISDAALARVPGEIVQAQTTGIDAVSGATLTTNGIKAAVAAAIKAGGGDPAAF AAAVVSKKTAHKVIKESADIVVVGAGGAGISAAVKAETLGKSVILIEKMPTIGGATVLNA GTLIATGSRYQREVMKETKDSPELAYKDIFRVGKNRNDPVLVKMVTEKVGGVVDWLIYDM KIPYGPAATQYPDHSANHQLGVQGRSVNFLNLMKGKFLDMGGKLMLETRAQSFIEKDGKV VGVKAVDAAGNTVELTSKAVILASGGYGADQSLLPPKMKSFLFYGVDGETGDGLKMGEAI GAATINMDLVKQYPQGVETRPHHGLAATASSTDTMKKSGAIYVNRDGKRFVDENAGLGVL TDKTIEQPGSIAYIVMDDAAWKQYVAKSLEDKLVPSAESLNEWTKIVNNGHPVMAVSKSL EDAAKQMGIDPKGLEATVKHWNDMVKAGSDKDFSRHLTGGLAEGGTWRIVEQKVRYQTTL GGLKADGAMRILKKDGSAIPGLYGAGCVVGGANGADSMTAMMNSWAIVSGVVAAESAASY AK >gi|319803839|gb|ADMF01000037.1| GENE 3 2899 - 4404 1757 501 aa, chain + ## HITS:1 COG:STM1094 KEGG:ns NR:ns ## COG: STM1094 COG4690 # Protein_GI_number: 16764452 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Salmonella typhimurium LT2 # 9 485 5 475 489 447 48.0 1e-125 MKSFRIAALAGAIASLVAGSALACTTVVVGQDATSDGSILIARSADSSALKAQHLVIHPA KKGQKGMYRTADHHGANNFEYPLPENAMRFTTVPNWQTQVHGATGWNEAGVGFSGTESIF ARDDALKIDPYVEDTGITEDDIPDVLLPVAKTAREAVQLLGSIVETKGAGEGFGVVLMDE KEVWYFETGTGHQWLAQRAPKNQYFASGNQGRLQKYDPKSPDFLASKTLVEFAVKNGFYD PKKDGEFNFSKAYCRDDDRDRDYNDPRVWQIQKLLTPSLEQPVQAGRSFPVWAAPDQKVT VADLKAIMRNHFESGELQSHDPYTKGLRGDEPYRPVSVFRTYESHVMQVRPWLPRAIGEV TYLAMGMADLSVYFPVYSGVSAYPEHFGMGTDKADDKSLYWKFRKLQTLVMTDYPTLAPV VKKAYAEFEKEVEGRMKTFEDSYVKTLKKDPAAAQKSLDDFNIQVIADAEALTADLMNQV LTIRTADIQKDNFFANRKKKD >gi|319803839|gb|ADMF01000037.1| GENE 4 4600 - 4968 412 122 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKALIAITALTASALIAGCANVPREAHRINLITLDEAEANHCKSLGWVGSVSVLLINGK ARNTAVILKKAVKMPGATHIAYTKGEAGYATTRAQVLSCPNPNLKTKDPETMAYQREYLE HD >gi|319803839|gb|ADMF01000037.1| GENE 5 5486 - 6865 686 459 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|253581677|ref|ZP_04858901.1| ## NR: gi|253581677|ref|ZP_04858901.1| outer membrane autotransporter barrel domain-containing protein [Fusobacterium varium ATCC 27725] # 2 194 59 239 1794 99 43.0 4e-19 MKLIGGWHYDKNTEKNDLDHSASNTNITLTGGTFDELIGGNHIKQPTAGDYDLKIGNTHV TLSGEGSVTYFIGGSKANNSDNTNLTTGDVTAVISGGTVTGSAMSWGNKDKISVVGGSYV KSTGAGGGTPASTTAETGNISLSISGGTFTGAVFGGSVADNYGEKQAESDSTKPDLSIKT GVSSLLIEGGTFQSSDPENPKNYDFGVFGGSAALGQKSSTESSGSSVTIEAKKVIDIKGR VVGGDLLGFGGSDENAASSKINGSTSVSITGSEKIETSESVIGGSLLHLKLDGESSSSSI SGTSSVFVDAENATLGDEVIGGSYVRQRDSKVTNTASVTVESTSVTIQNGTVKGNVIGGG KVNGLQGTISNTVTGDASVTISGGTVEGVVIGGGHSKIGQGASGTMAADVEGQASIQMTG GTVHGVIGGGLSYAYDTTGKFVSTSAVGSSAVSISGDIR >gi|319803839|gb|ADMF01000037.1| GENE 6 6997 - 8592 1519 531 aa, chain + ## HITS:1 COG:no KEGG:Dvul_2968 NR:ns ## KEGG: Dvul_2968 # Name: not_defined # Def: outer membrane autotransporter # Organism: D.vulgaris_DP4 # Pathway: not_defined # 228 531 401 721 721 120 33.0 2e-25 MIDGATINDNVVGGGYAYGSGSETAVKSASLTISNAELGSSGKEVNVYAGGVASANAKSS SVESALLQITATKVSGSVYTGGSGANSTVGTSSASLTDTTVSGELNFKGSDETSIVFNGV NSVGNVTGTAQSYTFNAADDQNDPVLTIGDGKGTIDLSAAKSIRAKAKAGQTLIDGSVKT DKEIVVVVETPTGDFTYNVGAGTGDGMGISSGGLQIGESTISGKGEANTNSKTLSEAFLG SVAFVNQGAEFIADEGLNAAVRAAQGAPGFTAFGAIHGGKSRYETGSHVDLRGTSLAAGA AGRVGGALIAGFVEAGWASSDSHVNGARGDADHDYYGVGAALRYDFSTPFYLEGSVRAGS ASTDFDGAFGNASAHFESDAFYASAHLGGGYVFKLDPVQLDLYGRYTVTYLDNDDTDLGT GYGETLSMSSATTHALRIGGRLTGDFSETTSWKVGAAYEHVFDGDAEADILFGGSAAALD VPSLSGNTGILELGLSVKPSAASPWTADIGVKGYVGDRRGAAGSISVLYAF >gi|319803839|gb|ADMF01000037.1| GENE 7 8787 - 9680 1147 297 aa, chain - ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 64 295 56 294 301 59 27.0 8e-09 MRILVPVDESLHSRRVIEFISHRETLLGTTPEIELVNVQYSVPETIIHLFGMEAVKQYYL EAGKKVFDELGPETLRRRGVTERVLYGDIGKTLAEEAEVFKADLIVMGTRGLNPVKGLLL GSVSNDLLARTKVPMLLLRDKTPPLMDKLRVGIFVDGSDYGAAAADFVLRNRELFGAKSE FTVVHASAPIPDPVAPNPVSPHMPTLTRQEREAEQRRVFADAVKPVIEPFEAAGLAVKAE LVVGDADHALADYANKNLDIVVMGSHGYGNFKAAVLGSTAMHVAALTEAPVLVIRKD >gi|319803839|gb|ADMF01000037.1| GENE 8 9714 - 10625 1078 303 aa, chain - ## HITS:1 COG:AF1760 KEGG:ns NR:ns ## COG: AF1760 COG0589 # Protein_GI_number: 11499349 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Archaeoglobus fulgidus # 3 300 1 270 270 68 26.0 2e-11 MRILIPVDGSTCSRAAVRFIGARSKFMGEKPDVTLLNVQQNIPGTVIEHFSLEAVRSVYE AEGKAIVEKLAPEIEAYGIEPHMAVRIDDCGPAVAKIAVDDNIDLITMGSRGLSPVKSFF LGSVSRSVLEYTTTPVLLVREKELPERENLRLLLAVDGSDYGESAAAFIADHPGLFGPNP TIDVIFVAPDYTKMALAEVDSVTPAPTLKFFEKENQLAWENAVTPVLATLRDAGFDAKAV KRTGDAAEAIAAYAGENADLIVMGSHGWGKFKSAVLGSTAAKVGAATELPILIIRSDKDE LLV >gi|319803839|gb|ADMF01000037.1| GENE 9 10734 - 11762 743 342 aa, chain - ## HITS:1 COG:VNG1536C KEGG:ns NR:ns ## COG: VNG1536C COG0589 # Protein_GI_number: 15790518 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Halobacterium sp. NRC-1 # 2 140 6 144 147 65 32.0 1e-10 MRILVPVDGSIPSRSVLQFVSDRAKQMPVMPVVQLLTVEPPVPSSGIGTMMELEAVRSAF AAEGERVLESLLPIAGGIPLYRAVVYGRPGEEIANASDTFCADLIAMGTHGRRGVSRLFI GSTSHSVLALVERPLLFIKGTQYPEPTENLHITLAVDGSKFGSAAAKFIVRSRDFFGPCP TVDVVSVLPDMERWLTNHSVGFESIVVKTRDRWNEEADALWKEAVAVPLEILSRAGINAR GVKYFGKPAQTIAEHARKTGGIVVIGSHGRGNFLQAVLGSTASKLCAVVDQPLLIVRMPS GVLDPKAENDDLPMTPETDWDTCAEPSEPSAASHHGETPNQH >gi|319803839|gb|ADMF01000037.1| GENE 10 11987 - 12793 1004 268 aa, chain - ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 18 268 20 269 269 207 50.0 1e-53 MDGELLAVLKWTAVYTGFTFLCTAAGAAAVFFLKPDAKTELAETLSLGFAAGIMTAASVW SLIIPAQEMAQKQGDTPWLIASLGIAAGAGFLKLLDAVLPHLHPGASKPEGPKTKMHRAM LLFLAITLHNIPEGGSVGLTAGLAAIAGDSASLSAAFALALGIGIQNIPEGAAVSLPLAG QGVSRWRAFWFGTGSGAVEPLFGILAALAIPLFLPVMPFMLAFAAGAMLYVVVEELIPAA HLSQHSDAGTLCFIFGFVIMMALDTALG >gi|319803839|gb|ADMF01000037.1| GENE 11 13102 - 14310 1667 402 aa, chain + ## HITS:1 COG:RSc1010 KEGG:ns NR:ns ## COG: RSc1010 COG1448 # Protein_GI_number: 17545729 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Ralstonia solanacearum # 7 398 5 398 398 390 50.0 1e-108 MLKNDIAALAPMPDDPILGLVSLYQADERPNKVNLGVGVYLNEAGKVPLLEVVEEAERRM TNRHQPRTYMPMSGLPAYCQAVQKLVFGKDHPAVAAGTIATVQTLGGTGALQLGAAFAHQ FLGIQESVVSDPTWGNHIAIFKADGLSVGKYPYLSADRSAVDFDAMIKALKVLPPKTLVL LHGCCHNPTGLDLTHEEWREVAQVVVEKDLLPLIDMAYQGFGDGIEEDAYAIRLFAELGL TFMAATSCSKNFGLYGERVGALHIYCGTQESTAVVLSILKRIVRQEYSNPPCHGGQIVAE VLADPALEAAWRKEVDGMRARIHAMRTALFEAGKAEGVDMSFAVKQKGMFSFTGLAPEEM DVLREEHAVYGVRNGRICIAGLNLRNVSVAAKAIADVIKSRQ >gi|319803839|gb|ADMF01000037.1| GENE 12 14443 - 15072 441 209 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLDLQRYAFYDAKRTMRLTLEPVSILEMLQDLPGELLFSAPLPAARLGVPCASPDVMHAR AAEFAQFDEETAFRLWFNPEPSADGRSVYVSAPDALPEMNGAPDFGIASAGFLIGSTLEM LQWVQNLTGAETPDEQRSELSKMLSAACETPHAAILTELSSGTELMRWPVQCGNPIRALS QAAAQWPEVKFAEDDFEFSLKPDLIHDLG >gi|319803839|gb|ADMF01000037.1| GENE 13 15253 - 17373 2667 706 aa, chain - ## HITS:1 COG:AF1511_2 KEGG:ns NR:ns ## COG: AF1511_2 COG1042 # Protein_GI_number: 11499106 # Func_class: C Energy production and conversion # Function: Acyl-CoA synthetase (NDP forming) # Organism: Archaeoglobus fulgidus # 3 698 1 687 691 468 38.0 1e-131 MLLDHILKPRAVAVVGASTRPHTIGNDLLKRLLEYGFKGHIYPVNPKGGEIEGLRAYTSV NELPDGVDLAVIVVNAKFVLSTVDECAARGIKGLVVISAGFKETGGEGRQLEEALAAKVR ANGMRMVGPNCLGVVNTNPNVRLDACFAESLPVAGDIGFVSQSGALGGGILNILKDLNVG FAQFISIGNQADVNAETALEYWENDPDVKQILLYMESIPDPANFRKLATRISKKKPIVAL KAGRSAAGASAASSHTGSLAGGDRAADALLKQSGVIREMSLKDLFSTAKVFANCPIPKGD RVAIVTNSGGPGIMATDAVCEFGMQMAPISDETKAELRSFLPAAASVKNPVDMIASAPLE HYRRTVETVLADPNVDMVMVIYLPFLGLKDIDVARELMRIRADHPEKPIVGVFMTKSEFF QQLSEMKVTVPFYMYSEEAAEAFCRLNQQRLWQARPEGVVPQRPMDEDRALSIFKAAAAE GRRELTTRESLEVLDACGVRTCRSGMAHSEAEAVELAARVGYPIVMKMTSKSTSHKTDVG GVRVGIADEAQLRAEYQDLLAKLEAKGLLEGLEGVIIQEMVKSKRELVTGIATDPQMGPM IMFGLGGVFVEVLKDVAFRIAPLTDIDAQELIRSVKAVKLLEGARGMIPAQMDKVEDTLL RISQLADQHRFVKELDINPLMVSDKDGEPIAVDARIAIDVDAVKAL >gi|319803839|gb|ADMF01000037.1| GENE 14 17673 - 19577 1983 634 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 35 517 44 495 502 124 28.0 4e-28 MRAFRLSAAALCLSAAFLSFPSAYAAEPAAQEVISASSSYLQSIQWDAEYDVVIAGYGFA GAAAAIAAADAGANVLMVEKAPYGKEGGNSRYAHQGCLFFDPSAPDDELFAYMKAMQNGA DNPSDEVIRTYIKETKHQAEYLRKLGADPKVTPNAAEFPDFKGAKYIQRVFVSLPGADGK LYALMQENVEKRASRIDIWYESPAVKLLQDEKTGIVHGMVVKSEGRDRFIRARRGVVLAT GGFENNPRMYENYAYVYNAFPKGAHFNTGDGIEMALDVNAKLVNMAVVNGPDPNVINPDT GAAYGYLLHDTSHNISGCGFTRNNAVIVGADGWRFMNEATHSKHGRVPYHNGWTPLVMPD NAFMIFDEEARKSECIYESWSKDSEKEIASGMVKKGNTIEELARELGIDPDGLRRQIDFY NEQCAKGEDLQFKRGKRYLKPLLSAPFYGVKVEKTFTNTQGGPERNERAELIKRGGGVIA HLYAAGELGSVFPNLYNGGGNIGEALAFGRIAGMEAARVKTDADPQSVMQGAANWHPKAV RASAAQAGEVTGRSRGIGGAIVLGVKFDGDRIQAVRVIEHHETPGIGAKALESLPAAAVA GNGKIDSVSGATITTKGFREAIADAIKNHSAKKQ >gi|319803839|gb|ADMF01000037.1| GENE 15 19756 - 20682 422 308 aa, chain + ## HITS:1 COG:PA0877 KEGG:ns NR:ns ## COG: PA0877 COG0583 # Protein_GI_number: 15596074 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 4 273 3 275 298 110 31.0 3e-24 MFTYDLVDLRLFSAAARAGSVSQAASEVHLAVSSASARLKAFEARSGVKLFERRPHGVDL TPAGVETVHAVRAMLHDAEVLESVLTRFRRNHQEVCVAALPNAMTVGLADDVSAFLEQNP EVSIKLTNYARAGRLLDSVLNRTCDLAFTSWTGGHAELLCAPYRPLRLAAVFAPESSAGK ALKGQKGVRLADLFDFDFIALDRDTALRHVIDEEVAKTGGSLRVKIWTESYASALHFAAA GRGVTILPLEAAKKDERVCALTLDEPWASLLIRIWHVPNLKELNPDADALLRFLVNASAA TRAGMETL >gi|319803839|gb|ADMF01000037.1| GENE 16 21083 - 21946 1335 287 aa, chain + ## HITS:1 COG:STM0245 KEGG:ns NR:ns ## COG: STM0245 COG1464 # Protein_GI_number: 16763634 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Salmonella typhimurium LT2 # 10 278 9 271 271 168 42.0 1e-41 MTKFTKSAAAAAAAILVSVTLAGCGGDEKTDITTVKVGVVGEYNAQWDTVNKLLEKDKIK VELVKYSDYATPNRALSDKEIDLNAFQHKAYLANDIKRNGYKIVAIGDTLVTPLRIFNNK QKIKAIADIKDGDKIAIPADLTNGGRALKLLEAAGLFTLNPDKGYVPNKTDITHFNKKVQ IVEAESGMLANLLPDVTAAVINGGNAFTAKLDPYADSIFSENLDPKTNPYFGQLVNVIVA READKDNPVYKKVVAAYQTQDVAQTLKDAYKGAYVPVWPGAADYKLK >gi|319803839|gb|ADMF01000037.1| GENE 17 22142 - 23377 1182 411 aa, chain + ## HITS:1 COG:SA1935 KEGG:ns NR:ns ## COG: SA1935 COG1473 # Protein_GI_number: 15927707 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Staphylococcus aureus N315 # 5 398 2 387 394 308 42.0 2e-83 MTTESPEQIIKAFVEKRLPIYQAAARDIHAHPETSNHEYFACKRLSELLKSEGFEVQVDV AGHPTGFDARFKSGKPGPVLCFLAEYDALVGLGHGCGHNLFGATSALAGAALAQAAKLVG GEIRVYGTPGEEGGENGSAKGSFVREGFFKDVDAALCVHPSSSGHRLTNPSLGCAPVDIE FHGKASHAASAPEQGINALDALIQVYNGINALRQHLPADVRIHGIITHGGDAPNIVPEYA AAKFYLRAATAPVLEEVWKKVERIVEGAALMTGAKGSMKPSQNRVENTILTPKFDAVYRR RMEELLAETGSSEKVEDSAEKAGGSSDVGNVSQVIPTIQPTIRISKVPVRGHSEEFKAAS CSALGLASIGLGAKALALTGLDLLTDPQLLADIKADHADALVRQASAAKQH >gi|319803839|gb|ADMF01000037.1| GENE 18 23413 - 24438 1043 341 aa, chain + ## HITS:1 COG:YPO1073 KEGG:ns NR:ns ## COG: YPO1073 COG1135 # Protein_GI_number: 16121374 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Yersinia pestis # 1 341 1 340 343 335 50.0 7e-92 MIKLNHITKRFESGGRTVTAVDDVSLAINAGEVFGIIGFSGAGKSTLVRCINLLERPTSG EVIVDGVDLTQLDEKALRQVRQRIGMIFQHFNLMPSRTVTENIEMPLKLTTLTPAERKAK ISSLLELVELSDKADAYPSQLSGGQKQRVAIARALANDPKVLLCDEATSALDPKTTRSIL KLLREVNQRLGITIVVITHQMSVVKYICDRAAVMEKGRVVEEGTILEIFSHPKMPVTKGF IDTATNVDDLYELLEETRSGDGVNHGQTVYLLTYTGSSAGKPLMVELYQRFGVEANIIFG NVELLKGTPLGKLAVTLSGTPESVGDALEFIRSQNVVVEAL >gi|319803839|gb|ADMF01000037.1| GENE 19 24438 - 25118 853 226 aa, chain + ## HITS:1 COG:L122401 KEGG:ns NR:ns ## COG: L122401 COG2011 # Protein_GI_number: 15672305 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Lactococcus lactis # 1 226 1 230 231 141 41.0 9e-34 MFDWIYFLAPNLKQLGGELLTCLGQTFTMIGVSGILSWILGILVGVLLVTCRPGGILENR PLFTIFDRGIDIIRSIPFIILIVLLIPLSRFLVGTGSGVTGSFVALVFGTVPFFARQIES VLSEIDHGLVEASAAMGFSPRQIIFGVYLRESIPGITRVTMITFVSFVGITAIAGAIGAG GIGDFAIRYGYQMGYRDMIWLTVLIILAIISIFQFFGNMIIRRTTH >gi|319803839|gb|ADMF01000037.1| GENE 20 25443 - 25670 78 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRQLLQILIKKVAKISELVFVAAVIAPIVDQKYLSYPVIIVSFVCCILTLVLSVLYGPKA ADGRDSSKTPLKTKK >gi|319803839|gb|ADMF01000037.1| GENE 21 25772 - 26218 390 148 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNMNFKAAAAVAALSALFLAGCSDGAKTEPSAAAASSSAAAPAKTEPSVAPSAAENTAS AAQPGRGCLQVTAVHPYDLKDMRFDEAAQALAHATGCAVRYTDQELSAMKIAPVVGTMSI KDAIAAALDGSPYTISNATDEVIEVTKK >gi|319803839|gb|ADMF01000037.1| GENE 22 26828 - 27718 1227 296 aa, chain + ## HITS:1 COG:RSc0922 KEGG:ns NR:ns ## COG: RSc0922 COG1464 # Protein_GI_number: 17545641 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Ralstonia solanacearum # 53 291 29 266 266 196 48.0 5e-50 MQKRTFLKSALALGVALSAAPILTACSKAEPEKQAAAQAPAAAPAAAEAPKLKPIKVAVT AGPHADIVTKAAEVAKKQGFDVKVVEFTDYITPDTALAEKQLDVAVYQHEPFLLNFNKQK GTDLVVAANAVVQPMGLYSNKIHSLDDIKADTKIAIPNDPSNGGRALVLLEKAGIIKLKP DYKGEASIHDVAENPRGVKLVELEAAQLPISLQDLDVACVPMNYAVSGGLDVNKQGFYFE SRDAKYALIIIAARPDNVQSPEVQTFVKCYQSPEVAAFIKEKFKGQINPAWEQPAK >gi|319803839|gb|ADMF01000037.1| GENE 23 27844 - 28800 1181 318 aa, chain + ## HITS:1 COG:yagD KEGG:ns NR:ns ## COG: yagD COG2040 # Protein_GI_number: 16128246 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Escherichia coli K12 # 6 307 5 306 310 270 48.0 2e-72 MALTKHPIADLIARRGGLVIDGAMSTPLEAAGLNLNDTLWSAKALLECPDLVRKVHYDYY AAGANAVEACSYQATEAAFARKGIEKAEASRLIRLSGELVREAKNDVLLEHPEWDPADLL TAGSIGPYGAYLADGSEYTGAYDLTREEYYAFHQLRLDELLNSGMDILAIETQPRFDEIE ALLAMIADRDITCWVTVTLKDGDMPDGTKLEVLAKCLDADPHVEAFGFNCVKREWVEPGL KRLSAYTDKPLVVYPNSGETYDPTTKTWHAQGVHEPDWNHYVPLWEHTGARCIGGCCRTL PKDIVQIADLLHRAAEKH >gi|319803839|gb|ADMF01000037.1| GENE 24 28955 - 30442 1708 495 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 10 485 10 475 484 135 27.0 3e-31 MTTNRREFFKTAAVGAVGAAGMLGGVTAAEAKSSKSAKYDLVIVGAGCGGLVCAIHAAEL GLKPLLLEKMPMPAGNAIYAAGFLLGLNTSFQKAKNVPADTAEAFYDDMMKVSQQKAVPA LTHTVVDNCTRLLEWLHSFCGINFLTGNKLVWPQLYRSHLVTGELKPGGAQLVMTLLNKA KAMGVEVRTNTKVVELIADPKTGGVAGAKVKTKGVVSEVYAKYGVVLATGGFSANQALVT QYIGSAGAKMPIRGSRIVAGENIVLTAPFLPKVVNVDQFHCGPIYGPTGANPLNIVNNGV CVNRQGVRFTDEGQTYVQMSRDVASMTPDNWAFMVCDQKTHDMPILKNDWESYARTKAPV YTGQTLEEAAKAAGIDAKTLQKTVEDFNKAVAGGDAGKLTPPNTRDKAPVIDTAPFYIVP FQGGMTATFGGPLINTEGEVLDTENHPVGNLYAIGNAAGGLFYDNYVGGAQLTAAGVFGM IVAEHVKALKSGKAA >gi|319803839|gb|ADMF01000037.1| GENE 25 30720 - 31565 669 281 aa, chain - ## HITS:1 COG:RSc0448_1 KEGG:ns NR:ns ## COG: RSc0448_1 COG2904 # Protein_GI_number: 17545167 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 122 1 126 132 115 47.0 1e-25 MPEPQGTALGLTTVYADQYDPKLLFPISRNIGRDAIGDHDFIGTDIWRMYEFSWLNANGL PQAAEVDLFVPASSPSIIESKSLKLYQGSFAQTRFAGGAEQVAAILKRDLSNAAGAPVEV AVNTLDTWTPTIDDLPGELLEEAFPDVSITDFEVNPELLQKAPAAIDTDVKGNIRAAVWR TNLFRSLCPVTGQPDYASVSIALTGEAVDPRSLLKYLVSYRAHRGFHEQCVEQIFHDLRS RFTFTALEVQACFTRRGGIDINPYRSMSSKMPEFVIREGRQ >gi|319803839|gb|ADMF01000037.1| GENE 26 31689 - 32651 978 320 aa, chain - ## HITS:1 COG:AGl379 KEGG:ns NR:ns ## COG: AGl379 COG1052 # Protein_GI_number: 15890302 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 46 314 42 310 311 234 46.0 1e-61 MLNDRPCIVNLISSRNTGHPLSLQLPQLGEVFYRDQLTPEATAKLGPSVDVLVGASNLKV PKSELDLYPNLKMVADFGVGYDGFDTAEIIRRGLRFSHTPDVLSEDTADLGLALLLDVTR RVAQGDAFIRRGDWPKKNFPLGRRLFGKKLGIAGLGRIGSVIAQRSQAFRMEVGYTSRSP KNVPWQRFPDMKALAQWCDFLIVVIPGSPETHHLVNAEVLDALGPQGYLVNIARGALVDT DALIKALKEHRIAGAALDVFEHEPHVEEGLIALDNVVLTPHQGSATVETRADMADLVMRN IQKALSGQAVITPVPGTRKD >gi|319803839|gb|ADMF01000037.1| GENE 27 32931 - 34199 1075 422 aa, chain - ## HITS:1 COG:mll1522 KEGG:ns NR:ns ## COG: mll1522 COG0477 # Protein_GI_number: 13471524 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 32 399 41 406 412 64 22.0 4e-10 MALRFICKQSSPSDGRRAYTFSVAAFCVIICFAATAIPVPLIAIWTQALSLTTFEVSMTV FAYVGGCLAVLLFFSKLSNYLGRRATVILTLAIGIASCLCFIAPQNASAIILGRLLQGVF AGLATSAAMSWTVDTAPKSHAWLGTALSAAGPGIGFILGTVLSGLSAETGIISADTLFIG LAVTLAVVLAAAIPAVETMQPGAVSLIRALTPSFGIPPKARRVFPLCAVSYIGTWALSTW FQGFSAMIGSAVFTDGQPSPASAALTYMLLVAPYAAGGILCGKLNPRKMLLPLLTGYLVS GTGMFAAAAYARPILFAVLLVLCGFIMGAICSLALKLLMECADITERAQTISTLYLAGYL GTSIPSFLLGYFVPNAGLGTIGLTFFGWFALVWISAFAFRRLAAQPNGGSTALQPQSAVA ME >gi|319803839|gb|ADMF01000037.1| GENE 28 34332 - 35417 635 361 aa, chain - ## HITS:1 COG:SMb20626 KEGG:ns NR:ns ## COG: SMb20626 COG2207 # Protein_GI_number: 16265286 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Sinorhizobium meliloti # 81 327 67 313 328 112 31.0 1e-24 MDALSQILAALSVKSYTATGVRGGGFSIAYPAYPGMKLLVSRKGKMYFLKKESPAPDSAL RDAGYASAGSSALSEAQSTPDWIELLPGSFLLMVEPTGFIFTDDPKLEPHPSAQTPYELR GGLADYGIKPGYEENILLAGKMTLDPTAAAQLRAALPPLLILKPNDNEADRLGWMMKMLH EEVEASGPGSSLVTTHLMQLVLIEVIRCWIYSPEAKKHPGIFLALRSPMLFRALSAIHNA PEKPWTVETLARTAGMSRSGFAKLFKDSVGETPLSYLTQWRITAACQLLRETNLSIKETA SRLGFSSPALFTAVFQRIMGMTPTECREQQRAALTASLAAYEAYEAYEASGRLTAEDKVH R >gi|319803839|gb|ADMF01000037.1| GENE 29 35819 - 36109 360 96 aa, chain - ## HITS:1 COG:no KEGG:BDP_1620 NR:ns ## KEGG: BDP_1620 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 96 1 96 96 139 73.0 2e-32 MKVKAYLEITMQIAPANRPAAAKVYQDYRAPFLSNITGALSKELLVRDLDVQVIHGFDSP EHAQAYLTSDLFKNDVAPSLQPLWSAAPDVRIYTVA >gi|319803839|gb|ADMF01000037.1| GENE 30 36299 - 36691 257 130 aa, chain + ## HITS:1 COG:MA0333 KEGG:ns NR:ns ## COG: MA0333 COG1733 # Protein_GI_number: 20089231 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanosarcina acetivorans str.C2A # 8 106 9 106 127 98 50.0 2e-21 MYEPKYAKDIRCPLEYGLKVFGGKWKSRIICVLAEKKKLRYSALRRDMANISDAILAATL KELIADQLVAREQFNEIPPRVEYRLTEKGESVVPILQSICRWAGLYERNISAANPLPQCQ QCSYGFRSDS >gi|319803839|gb|ADMF01000037.1| GENE 31 36748 - 37707 958 319 aa, chain - ## HITS:1 COG:VC2323 KEGG:ns NR:ns ## COG: VC2323 COG1275 # Protein_GI_number: 15642321 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Vibrio cholerae # 1 309 1 309 322 271 52.0 9e-73 MLTTLPRRLRGLPTPMAGLALGVASLGWCMENALPLNGWGQLIGAFTASALLLLLVLRFV LHTETLWEDLKHPVVGSIVPTFAMSLMVISRALLHAFPTFAAGLWCVGITLHLAALIAFI WFRLRDPVLEKMVPSWFIPPVGIIVADVAFPGVPAFLPFAQTLFVIGLVSYAILLPTMLY RLFFLPQVANAAKPTLAILAAPASLSLAGLLSVYEHPHPILTALLFGIAVLMTIAIYFAF WNLLRLKFSPGYAAFTFPMAIGATALYKLSDLVSHYAGAQQYAYELRLFAHFELAIAAVV ICYVFVLYMKNLPQFLRNN >gi|319803839|gb|ADMF01000037.1| GENE 32 37919 - 38923 721 334 aa, chain + ## HITS:1 COG:CC0341 KEGG:ns NR:ns ## COG: CC0341 COG2819 # Protein_GI_number: 16124596 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Caulobacter vibrioides # 71 330 89 321 329 80 31.0 5e-15 MSSIRLSRRKVLSAAALFGSLDAVGFNVLPASASPSPISVHDASNSAQSAVPQPVFFKRG HKLETGFQAEIRSPLLGEIRALRIRMPDRQKAALKGVHVLYLLDGETFFAAAAAYAQWLE QSRLGTIGGVMVVGIENKENRTRDLTPSASAADRQGRLDPAATLQGGGAGRFLDFITGEL RQSVEAQLPDGMRILRRTLIGHSFGGLFTVNAVLTQPHAFDDFIAADPSFWWDQRRLIQK AAADGLGDKAAAGPGRRLYLGFATKPRKDRTASAERPAAGARLSADPLVSDFIGKLQSQG MQVRRQDFPDEVHGTVMFPALFDALKHFYTRELS >gi|319803839|gb|ADMF01000037.1| GENE 33 39002 - 39829 435 275 aa, chain + ## HITS:1 COG:RSc0399 KEGG:ns NR:ns ## COG: RSc0399 COG0266 # Protein_GI_number: 17545118 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Ralstonia solanacearum # 1 274 1 287 288 224 47.0 1e-58 MPELPEVEVTRRGLAPAIVGRCVTAVNVRTPKLREPLQDLAALLPGLTLEHLERRAKYLI WTFRSAAGEKRWLLTHMGMSGSWRIWPVPAPSAHKHDHADIVFGDVLVRYTDPRRFGSIL FMTTDPRKSLPLTKLGCEPWDPTLTADRFYTELQKTHRSIKEVLLSGKIVVGCGNIYCSE ALFAAGIRPTRPADAISKARAGRLLESVRKTLETAIAAGGSTLHDFHGVSGETGWFPLAC AVYGREGKPCPICGRPITRIEQGGRSTFWCPHCQH >gi|319803839|gb|ADMF01000037.1| GENE 34 39889 - 43947 3283 1352 aa, chain - ## HITS:1 COG:BH2913 KEGG:ns NR:ns ## COG: BH2913 COG0553 # Protein_GI_number: 15615476 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Bacillus halodurans # 693 1351 334 995 995 434 39.0 1e-121 MATRRQYGTTWWGAAWLAALEKVDDANRLPRGKSYANTGRVEQLSLAADRPGCIEAFVSG SVYYPYEVTVGMKPISARDAKRLTAAIAADPDLVASLMDGELPHGIADLCRELDIELFPR SWRSMQLSCSCPDSARVCKHLAAVFYVMADRIDIDPFFIFRFRGLDLKAEMRKCGINVDR AVKVKPLDASEILAGSAALMSEKESTSAAESTPSNEKAPVPLTSGSAADAALQRLRSLPY AELEPLGETILKLIPKTSAISNNPDCTAFTRQVMRQAEREARNAIAEAFLLESSLSQGID ERMEAEAADEEQSSGTPLLTPKAAWSAFADPFFHAEGSGRKAAQQAWEKASAEIKTRTLP KLTLAANNLSFVIGLELPAASSRSQPKFVPVDLSEFFYALFTSLSRREAQALSPEIECWR ETAAAAAHLLENGALIPAAVSTEALKDPAPRIWWIPALRSKPVRQLVNALAQGIAPWADR MVECDAALGPDGEIDPKRAAVLLLSAAFSGFINRGVLGWKAFKGPSDIFEAAAACCSLDQ LDGKVMPSAGEALARMLKPFALGDAYPWRPVLTVRSAKKDCFAVNFGILGRCADLHKAAE NELSRPLSAEDLPENTAPEDIPNIPSNPDMPPAAPDSEALFREADAAAGQASSASLSAGS KEPQLPMDRPVLLRTLLSNPVWANHRFAALTILKTIAQAFPVLDGIRKRKGKPASLPMED LKDFLFDIAPHLSMLGITLMLPQAMRNLLRPKLVGAAAANIDFMKSPLGRDALAAFDWNA AVGGRLLSKDEFQALAGKAGQIVQIGDDFVYLDPDEINRIKKTLDNPPPMTALERMRAVI TGEFEGAEIEVSNDVKEGLKRITEVTDVKPPEGLQATLRPYQARGYSWLMKNTKLGLGSL IADDMGLGKTLQVISAVLELKNTGELKKKKVLAVLPTTLIANWTRELTKFAPTVTFGVYH GADRQLPAGVDMPDVLLTSYGTLRRDYDLLSALKWRLLIIDEAQAVKNPGTAQTAAVRGI KAQQVIAMTGTPVENRLMEFWSILSTVQPKLLGSMKEFADVFARPIEADHDERAAEAFRR LTAPFMLRRVKTDKSIIADLPEKNTIDHFAQMHLEQAVLYQETLDRMLKQIMEVEKSPEN NTPAGRMARRGRVLKLITSLKQICNSPSQFLKTPSLTPDSGKGDALLEILSQCADSDRKV LIFTQYREMGERLQDWIAQALGERPDFLHGGVSAEERMKMVDRFQEDRTARSFILSLKAG GTGLNLTAASAVIHYDLWWNPAVEAQATDRAFRIGQRRDVLVYRFITAGSFEERINDMLM QKRDLADMTVAAGENWIGDLTTSELAAVFKLG >gi|319803839|gb|ADMF01000037.1| GENE 35 44150 - 45454 1520 434 aa, chain - ## HITS:1 COG:PM1300 KEGG:ns NR:ns ## COG: PM1300 COG1473 # Protein_GI_number: 15603165 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pasteurella multocida # 16 427 5 416 422 357 44.0 2e-98 MPGDKFMTAYTEKQYVEEMIATRRKIHQTPEEGWTEFQTTWLVVERLRALGLKVLLGTQV INPKAVMGRDPKLVEAAVKRALAAGVPQSFIDETGGYTGAVAVLETGRPGPVTAFRSDMD CVLVTESDSPDHLPTACGFSSKRPGFMHACGHDGHTSVALEVCRWLVDHKDQLKGTIKVL FQPAEEGVRGAGAMAASGVVDDVDTLIGAHVGTFAKLGTIGLCEGGFLASTKLDVHFHGR PSHAGSDPEKGRSALMAACAAAMMMQGIPRSGEGTTRIAVGRLNAGEGRNVTPVHADMQL EVRGETGEINQYMVKNVENIVEGVKRAYEVEAEIVKAGEATTLPSCPEVLDLIESVAKTV PGVESIERFNKPSGSEDCTLLIERVVQHGGRGAYFLFGCNHHGHHRADFEIQDETSLPMA FNMFKGLALRLNGI >gi|319803839|gb|ADMF01000037.1| GENE 36 45632 - 46045 657 137 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKGLILISTVAFSLASFAASASEAPSESVCSLTHLKQVADKEGLDPAGALAKECIGKGYT AAKAFFAEGYDAGKEGAVSGYDKAKELAKDGYEDVKEGSKDAYDKAKDGVVEGAGAAWNG LKEAGSSVKESLFGSKK >gi|319803839|gb|ADMF01000037.1| GENE 37 46221 - 47360 1215 379 aa, chain - ## HITS:1 COG:ECs0870 KEGG:ns NR:ns ## COG: ECs0870 COG0842 # Protein_GI_number: 15830124 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 19 378 4 367 368 225 34.0 1e-58 MIRQSLQNIWAAFTASLLRLKALSKKELITLLLDPSVRRILFVPILAQSILFGYGATFNL EEAPYVLYDASQTPDSRALSARLEANRIFKRAAEVPSAQAFTAAVADGRALVGFWIPEDF AQKLARGETAPVYVAADARNTTTANVAVGYAAAIIEEFNASRQVRSVLELKDRYRYNENG ITRWNIMTGLILGLAMIQVMLLAGLAVSREREEGSFDMMLMTPLTPVEILIGKAVPPIVI GVLQSAMIFAVCRWWFDIPFAGSLALLFGVVLLFAASIVGLALMISAWAQTLQQSVVACF ILLLPSLVLSGLMTPTAAMPEWMQTITILNPVRYGILVVRMIYFENAGISEIAPYLWPMT LIAAASVPGAVWLFGRKVA >gi|319803839|gb|ADMF01000037.1| GENE 38 47379 - 48554 1159 391 aa, chain - ## HITS:1 COG:SMb21205 KEGG:ns NR:ns ## COG: SMb21205 COG0842 # Protein_GI_number: 16264619 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Sinorhizobium meliloti # 19 390 23 383 384 185 35.0 2e-46 MKRERGRPQLRFGEQLLILLEKEWLQMVRDPAVIFMGALLPVVLIVLFGWGLSMDLLKVP AVLTAGESTPLTAEVRAAFRGSPYFELTEVPSRQDAEMLFAARRTEVIIDLPPGFTRDAA MGRAQIGLTVHGVDASAASIIRTYAAAVVAGLSQKIALREDFALLGSSAGQQAQTSGAAA LLSRTWFNEANTSAWYLVPGLSIVVLTLSASFLGAIIIAREWERGTLEMLSVTPASPGAI LAAKFLVNFLLTAVGAMLAFFAAVFVFEVPVRGSLWLLAATILLYSAWAIAFGLLLSAVF KSQFTAIQFAVIGSYLPSLMLSGYLFDLRSVPWFISAVGRLMPPTYAIESVKILYLSGEP ERIVLANLALLAAAALGFFALALVFARKRLD >gi|319803839|gb|ADMF01000037.1| GENE 39 48551 - 50410 1102 619 aa, chain - ## HITS:1 COG:ybhF KEGG:ns NR:ns ## COG: ybhF COG1131 # Protein_GI_number: 16128762 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Escherichia coli K12 # 7 599 11 573 583 434 41.0 1e-121 MTEALPLVVRGLVKTFPSPDGTPFAAVDHLDLELPAQGELVAVVGPDGAGKTTLLRLLAG ILSPDAGSISLFGLTPDTESERFTHTVGFMPQKTGLYEELTVFENFSLFGRLRGLAAHEL QSKFQELMTLSGLVGFENRLAGKLSGGMKQKLGLACALLGEPKLLILDEPTVGVDPLSRR ELRRILDAMRLRSRMTVVMSTAYLDEAETADRVIVLSRGRIAAQGKPRALCAPLTGRSFR AEALEAEHSSTLARTLMEAAALPPGQALIIDAVPRGRFIDLLAAAQSGANALSLRLRQSL HSGPLPAFHLAQRPPTLEDLLADQGYPSSDAASGSSASKLKNLSAIDAQSENLYAPAALF PGEYAVEAIGLSRRFGSFTAVADSTFQVRRGEIFGLLGPNGAGKTTTFRMLCGLLAPTTG DIRAAGADLRRAKSAARARVGYVAQKFSLYERLTARQNLEYFGEAYGVAGQNLAHRIDAL AAELGLSDDLERRTAVLPLGAKRELAFACALIHRPAVLFLDEATSGADLTARRTFWRRIV RLSQAGTTIVVTTHFMEEAEYCDRILIQDNGRILASGTPLEVRTRANAESIDEAFRQIVL NARRAEAENKRAKSSEAAR >gi|319803839|gb|ADMF01000037.1| GENE 40 50403 - 51410 903 335 aa, chain - ## HITS:1 COG:ybhG KEGG:ns NR:ns ## COG: ybhG COG0845 # Protein_GI_number: 16128763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli K12 # 39 327 37 326 332 166 38.0 4e-41 MKPLRLFSTLALSAVIALCAATAWKLRTAENAAPANRAWGNVETRQTSLAFEASGRIAAL HKEEGESVQAGELLGRLDDEALRISRRQAAAELKRLQAQAALAHEGTRQEDIDAARANEA AARAQLEYASATLKRQQDLVPAGAASRQMLDDARRAEHAARESLTAAAAQRAAAEKGPRA QEIAAADAAAEAAAASLAALDYQIHRGAVLTAPSAGIIRARLAEPGDMASPSRTIYQLSV ADPKWIRAYLTERQLGLVKEGTLATVFTDTVGPVDGTVAFVSDTAEFTPKTVQTEDLRAS LVYEVRITVRDPENRLRLGQPVTVEFAQPRSSPHD >gi|319803839|gb|ADMF01000037.1| GENE 41 51716 - 52687 1298 323 aa, chain - ## HITS:1 COG:no KEGG:RB3532 NR:ns ## KEGG: RB3532 # Name: not_defined # Def: alkaline phosphatase PhoA (EC:3.1.3.1) # Organism: R.baltica # Pathway: gamma-Hexachlorocyclohexane degradation [PATH:rba00361]; Folate biosynthesis [PATH:rba00790]; Metabolic pathways [PATH:rba01100]; Two-component system [PATH:rba02020] # 49 318 76 324 328 139 32.0 2e-31 MQRRLFFRNAAGLFLAPAAMQFAGTASAATPAVSPIELPPAEDIISSFGWVTDIHYTTAP THTIPAEDSIRVYSHSLAKLHQAIDVFNTRKLDFAIELGDFKDCTKTVDRELTIGFLQTV ESAFRRYQGDRYHVMGNHDFDQISLGDYLANTNNAGDADGKTYYAFVKNGVKYIVLDACF NNDEGEHYSLGKLDWQVAIVPKMEMEWFRKELATGKEPVVVFCHQLVNTWDEKTQNIPHA FFVQNAAEVVDAMEKSGRVLAFICGHFHKGAYSEHNGIHYIVNQGLVERPLPHNVAGMVH IDKNHNLYVEGLWNERSHVCKKA >gi|319803839|gb|ADMF01000037.1| GENE 42 52979 - 53485 530 168 aa, chain + ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 4 161 5 162 162 178 51.0 3e-45 MFTLRAATPKDVDILASIEAQSFPEAEMATRESFEKRLAVFPDCFLILFEDGEPVGLIDG MITNNRTISDDMFENASLHVPNGRWQSVFGLAVIPSKRHQGCASTLMRAFIEKARQEGRD GLILTCKEKLIPFYEGFGYVNCGVSKSVHGGAVWYDMELDFREKPRDY >gi|319803839|gb|ADMF01000037.1| GENE 43 53551 - 54891 848 446 aa, chain - ## HITS:1 COG:no KEGG:Clim_0237 NR:ns ## KEGG: Clim_0237 # Name: not_defined # Def: HipA domain protein # Organism: C.limicola # Pathway: not_defined # 80 443 28 404 415 101 25.0 7e-20 MSKCSFRKWLIHSDAIQDEPLIGELYFPTLPSEIAAERTSEESHSNGESMTAMNERQKKS LNRLTAAEMKWSARAMASLQDSIRFRYSKAWLDNGFPIGADLPLQEGLIKPLNAGRLFGF LADRALDGTSALWFEQAFAMGSQGTAVPADASSIERQSILLPHCEAHAGGIRIRSAEGEP AGSTLPIPMESNAAAGIPLAIQNAERGRADLRSLLAIAAATTLPGRHSPRVVVSGRDEEV MTLSRLDDLCSIPVWREIYMRLARESGIETAQTRLKDVRGSTALLTSRIDRAAGKPLFTL SARTLTAGRMGSYLGIADILNSDGASPAEDLPKVWRRMAFALLTGAADAPERWLFVREEF GWRLAPAHGWRPNTGAARPMTADGRRPIAAAEDLVRLAPYFAMKTTDAKKVLLAIRRATA DWEDLAFSAGAGAQEVRELEPCFTTY >gi|319803839|gb|ADMF01000037.1| GENE 44 55058 - 55372 142 104 aa, chain - ## HITS:1 COG:no KEGG:Caul_5343 NR:ns ## KEGG: Caul_5343 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: Caulobacter_K31 # Pathway: not_defined # 3 103 7 107 110 75 48.0 6e-13 MRPSIAVEESVIQLGSNLRSARLRRRLPQSVVADRAGISLNTLSKIENGDCGVSIGNIAS VLNALGLSPLLSGLAAAQEDSAGLMLEERNLPQRVRSKKKSAGQ >gi|319803839|gb|ADMF01000037.1| GENE 45 56520 - 57443 1066 307 aa, chain - ## HITS:1 COG:BS_ybfH KEGG:ns NR:ns ## COG: BS_ybfH COG0697 # Protein_GI_number: 16077290 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 9 277 5 274 306 85 26.0 1e-16 MLRGTSFMRSWSYHLLALFVVLCWGMTLVSSKVLLNFGMQPWALVELRSVLAYGILIFLA PMQLYSGTMRGEITVALLGLTSIPLFFGLQTLALEHGVVSTTASLIAMGPLLSGLLAMAA LRTWKLHWMTFLGICTAATGTFLLYFDNAVLQDLPRLGFYLGLAAAAAYAVYSLVLRALA DLPALFVMRKSTGYGILGALPFYLNEQPTDAAILFEVPVAGANLVFLALAATVIGYTLWH KAEQEIGASGTRWYTYLSPAVGIIGGLWFLNEEMSYIGVMGVGMILCGVVCAQTGLVRVA AEMAKRW >gi|319803839|gb|ADMF01000037.1| GENE 46 57586 - 58317 880 243 aa, chain - ## HITS:1 COG:VCA1013 KEGG:ns NR:ns ## COG: VCA1013 COG3314 # Protein_GI_number: 15601766 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 25 231 14 220 243 206 49.0 3e-53 MSDTPKKPTADQSAEAELSKAPGIGGYISFIVAILFFSGLLITDKWWGIFDYTILNGSFG NVVANVTDKGGELSTTFSNFRGKGGSGAIDGFVFALTLVPSIMLATAMIAVFEYYGAIRA ATRVLNPILRPLMGLPGSTSLAIVASLQSTDAGAALTRALKDRGELTEDEVSIFATFQMT ADAALGNFLATGVVFFTLKNAAGDLVVPTTIGVCLGIILLGKVFAANVMRLLCLRRRKPS AAA >gi|319803839|gb|ADMF01000037.1| GENE 47 58596 - 59504 570 302 aa, chain + ## HITS:1 COG:FN0805 KEGG:ns NR:ns ## COG: FN0805 COG4912 # Protein_GI_number: 19704140 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Fusobacterium nucleatum # 40 254 49 242 251 72 24.0 8e-13 MNASSNVSQLDALHLELLHAAIPQQYDTIGVMMPGVAGRIGCRASAYRSAAKRLCRSGAG NVESVLAAFLSDAQCRRTQGRGYVQEVLWTVMLAASQAEGIPFAKRLEWLDKLAQCIDNW ASCDLLGEAVKDFTLPQNEAAAFAFLDALIKSRNLWRIRLALVLMLAHMAPAGSRPLKRA VQLSSAPEVLTCAAQSYYGSMGLAWAFSVYAVHDFSLVERVVADLIVNKRIDPATARRTA QKVRESFRSAQAEKAMLSQNIQKALDGMPAGSLPAARNSKPARAVPAFRRKLLKGTPPSA AL >gi|319803839|gb|ADMF01000037.1| GENE 48 59571 - 60110 764 179 aa, chain + ## HITS:1 COG:RSc2930 KEGG:ns NR:ns ## COG: RSc2930 COG1970 # Protein_GI_number: 17547649 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Ralstonia solanacearum # 4 171 3 139 141 113 42.0 2e-25 MRKFFQEFQAFISKGNVLDLAVAVIIGAAFSKIVDSLVKDIINPILGVLVGRPDFTNLFV VLKDAPNYTGPQTYEGLVKAGATVFGYGAFLTAIVQFLLLAFAVFWLIKIVVTARTRIAA EADRLLNAKHKEEEEAKAAAQAAAPAPAPAPAPSAEELELLREIRDLLKAQKGTAVKDE >gi|319803839|gb|ADMF01000037.1| GENE 49 60240 - 61157 1190 305 aa, chain - ## HITS:1 COG:AF0756 KEGG:ns NR:ns ## COG: AF0756 COG1227 # Protein_GI_number: 11498362 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Archaeoglobus fulgidus # 5 303 7 319 322 278 49.0 8e-75 MSAIILGHKHPDTDSIVSAIACTDLYRQRGLDVKAAAQGTPAPETAFVLERFGLQAPEVV TSVAGKDVYIVDYSDLNQAPDDFKDCTLKGIVDHHKLGDMTSSAPLEIVIMPVGCTNTIL KRMYDYLGFVPPKNIAGAMLCAILSDTVIFKSPTCTPADKAAAAELAEIAGIEDIEALGM ELFTAKSAVKGVAARDLIMRDFKDFNMSGSKVGIGQLELVDLKLLEDRIPELLADLAALK AEGRHTAILLLTDIMKEGSLLLMVSDDPAKIAGAFGTTAEGTPWLPGVMSRKKQVVPNLE AAFKA >gi|319803839|gb|ADMF01000037.1| GENE 50 61644 - 64253 2237 869 aa, chain + ## HITS:1 COG:PAE2859 KEGG:ns NR:ns ## COG: PAE2859 COG0243 # Protein_GI_number: 18313640 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Pyrobaculum aerophilum # 36 868 24 814 816 607 40.0 1e-173 MREDKTVDGPGSIGFSRRSLLSGAAAAGAAGTFGFSALMPADKALAEQVEALKADGWEAH PCACNVCGGYCGLLAMHKKGAPVSQETVRIMPNPTHPQRGCCARGAQAMWVWNHPMRLKK PLKRVGARGDGKFQEISWDQALNEIAERVKAIVEKDGERAVTMSSHNFSAMQKWFGCALG TPNVISHSSTCNSASIAGRRMVFGKGFDGAGKVEPDYARAKYLLCVGRTLNCAIGVAAVV ARAKTEGTKVVFVDPRMPEGALTGSEWIPIRPGADSAFLLSLIHIGITEKLVDFEFLRRH TNAPYLVETGTRRPIAASEIIAGAPEDAFVVMDRKTASYVVMGLKKDDKGNAVGFAEPEG VDPELDHAARITALDGRELEAETCFRAFAASAAHWTPQEAARTTGIPAETITRVAREFFT QGGVADDGWYASRNGNDTHDFALLSLINAFTGRIDQPGGFVVTQGGGFKAPGVSLSGGKG KGPHGETWTAPEKKSLDKILYPEGSGTYSAVFEAIETGKPYPVRAAFFTGTTMFHREANS ARLAKALMGLELVVVQDIFPHEICDYADYVLPCTYFLEWHEYAGVKWALNGNVQKNDAGI APPQGCEAREEVWQFAEILRRAYPDRAKERLGLEEELKTREAFKAWYDGMMDAAWAKFIA AKNKAKPGDGDRIAAEVEAQGWSQTAVKKWGVYPYVKPFGTPTGKAELISFYFTQKYEDK GASGLPRWVESPGFTPPKPRSNEFVLISGKDSSSCSGVAMWTWPTKFLGDRSIWMNPADA ERIGIKNGQEVELEGLDTGVKGRTTVKITNRVMPGVLFAHGFSGGVRTKQNLGAYEWVRE GINSHWFCTGYREPVVGSLSNNCSVRVRV >gi|319803839|gb|ADMF01000037.1| GENE 51 64274 - 64855 300 193 aa, chain + ## HITS:1 COG:PAE2860 KEGG:ns NR:ns ## COG: PAE2860 COG0437 # Protein_GI_number: 18313641 # Func_class: C Energy production and conversion # Function: Fe-S-cluster-containing hydrogenase components 1 # Organism: Pyrobaculum aerophilum # 6 191 3 186 188 188 53.0 5e-48 MENHKKLAHLLDVTQCVGCSACIVACAQTNYPDMLNAENTGWESLPANIRRVSAELARRP VELLVQCQQCENAPCITVCPFGANSHDPETGQVKTDPSRCVGCGYCVTACPYDARWMHPK TGLPVKCMGKGCESLLKAGKDPACVAACPASARAFGDINDPSSAISQRLQHGRSERLMPQ KGTRPNFFVVVNK >gi|319803839|gb|ADMF01000037.1| GENE 52 64852 - 65721 790 289 aa, chain + ## HITS:1 COG:PAE2861 KEGG:ns NR:ns ## COG: PAE2861 COG3301 # Protein_GI_number: 18313642 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, membrane component # Organism: Pyrobaculum aerophilum # 19 235 11 235 290 70 31.0 5e-12 MTAEYMNLTAQAATSHWGWTIAFFLWFVGLSGMSLFLNYWVRSRRIHYAATAAAVVGTLL VVSHLGRILNLPAAAFNALIHWSFGFTSWMFIGICILAVLCVVTVLQAWLLTKGSALGMR CGLLAFDAVLGVAATAYSGFLLTQAVGVPLWTTAAIPVLWIFSGLACAVGLIEILAAAGK LDAESPRWLHAAGWAVHGGEAFVLFAFVLTALSGTPGAAAGAESLISGSTSLLFWGGAVG CGLLIPCITACLKSLPAAALGGAAAIIGALSLRAAILFAGTFDPVIWPL >gi|319803839|gb|ADMF01000037.1| GENE 53 66056 - 66481 301 141 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 6 134 438 564 570 101 39.0 8e-21 ASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYRFVLQSM MERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRNRVAQYR WSTETTARDQMFLELFFGESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:26:09 2011 Seq name: gi|319803776|gb|ADMF01000038.1| Sutterella wadsworthensis 3_1_45B cont1.38, whole genome shotgun sequence Length of sequence - 62768 bp Number of predicted genes - 62, with homology - 43 Number of transcription units - 41, operones - 16 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 321 205 ## - Prom 341 - 400 6.1 2 2 Tu 1 . - CDS 700 - 954 66 ## - Prom 983 - 1042 2.1 - Term 1013 - 1041 -0.1 3 3 Tu 1 . - CDS 1289 - 3592 1379 ## pRALTA_0410 transposase, IS6 family - Prom 3623 - 3682 7.3 - Term 3600 - 3649 2.1 4 4 Op 1 . - CDS 3759 - 4109 291 ## 5 4 Op 2 . - CDS 4100 - 4507 230 ## - Prom 4672 - 4731 2.8 6 5 Tu 1 . + CDS 4576 - 4770 78 ## 7 6 Tu 1 . - CDS 4808 - 5407 288 ## Ppha_0885 hypothetical protein - Term 5787 - 5818 0.9 8 7 Tu 1 . - CDS 6020 - 6385 113 ## - Prom 6421 - 6480 4.2 9 8 Op 1 . - CDS 6977 - 7390 145 ## HAPS_1021 glycosyl transferase, group 1 10 8 Op 2 . - CDS 7387 - 7680 57 ## AB57_3400 glycosyltransferase - Prom 7703 - 7762 5.3 + Prom 8350 - 8409 3.7 11 9 Tu 1 . + CDS 8433 - 8513 58 ## 12 10 Op 1 . - CDS 9272 - 10270 -99 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 13 10 Op 2 . - CDS 10323 - 10787 234 ## BC1002_0886 glycosyl transferase group 1 - Prom 10813 - 10872 5.4 14 11 Tu 1 . - CDS 11081 - 11785 245 ## COG3039 Transposase and inactivated derivatives, IS5 family - Prom 11954 - 12013 4.1 + Prom 12127 - 12186 2.6 15 12 Tu 1 . + CDS 12246 - 13601 728 ## COG3547 Transposase and inactivated derivatives + Term 13705 - 13740 6.0 - TRNA 13742 - 13816 82.5 # Val CAC 0 0 - Term 13687 - 13733 14.1 16 13 Op 1 2/0.143 - CDS 13895 - 14371 378 ## COG0328 Ribonuclease HI 17 13 Op 2 . - CDS 14368 - 15246 558 ## COG0500 SAM-dependent methyltransferases - Prom 15349 - 15408 3.4 + Prom 15297 - 15356 1.5 18 14 Tu 1 . + CDS 15404 - 17515 1131 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 17612 - 17647 2.4 + Prom 17531 - 17590 3.9 19 15 Op 1 . + CDS 17715 - 18506 1111 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) + Term 18529 - 18572 2.1 20 15 Op 2 . + CDS 18604 - 19386 311 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 21 15 Op 3 17/0.000 + CDS 19404 - 20291 370 ## COG0061 Predicted sugar kinase 22 15 Op 4 . + CDS 20306 - 21973 960 ## COG0497 ATPase involved in DNA repair - Term 21870 - 21902 -0.3 23 16 Tu 1 . - CDS 21945 - 22247 122 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 22314 - 22373 2.2 - Term 22625 - 22666 1.4 24 17 Op 1 . - CDS 22736 - 23686 517 ## COG0859 ADP-heptose:LPS heptosyltransferase 25 17 Op 2 . - CDS 23705 - 24016 182 ## Bphy_3923 glycosyl transferase group 1 26 18 Tu 1 . - CDS 24430 - 24504 57 ## + Prom 24804 - 24863 3.9 27 19 Op 1 . + CDS 24991 - 26646 282 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 28 19 Op 2 . + CDS 26656 - 27603 425 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 29 20 Tu 1 . - CDS 27590 - 28669 378 ## COG0859 ADP-heptose:LPS heptosyltransferase 30 21 Op 1 . + CDS 28720 - 30216 700 ## COG1530 Ribonucleases G and E 31 21 Op 2 . + CDS 30236 - 31759 487 ## COG2925 Exonuclease I 32 21 Op 3 . + CDS 31851 - 33287 1100 ## COG1794 Aspartate racemase + Term 33298 - 33348 9.1 33 22 Tu 1 . + CDS 33355 - 34248 594 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases + Term 34490 - 34522 2.4 + Prom 34336 - 34395 3.4 34 23 Tu 1 . + CDS 34534 - 34836 68 ## COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes + Term 34958 - 35003 0.8 + Prom 35027 - 35086 2.2 35 24 Op 1 11/0.000 + CDS 35310 - 35687 143 ## COG1091 dTDP-4-dehydrorhamnose reductase + Prom 35698 - 35757 2.7 36 24 Op 2 . + CDS 35903 - 36703 236 ## COG1088 dTDP-D-glucose 4,6-dehydratase + Term 36778 - 36814 3.0 + Prom 36705 - 36764 3.2 37 25 Tu 1 . + CDS 36828 - 38897 1983 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 38976 - 39012 8.0 + Prom 38923 - 38982 1.5 38 26 Tu 1 . + CDS 39098 - 39427 646 ## ECA2794 hypothetical protein + Term 39467 - 39521 2.7 39 27 Op 1 . + CDS 39544 - 40641 1126 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis + Term 40666 - 40717 3.0 40 27 Op 2 . + CDS 40742 - 44149 1994 ## COG0587 DNA polymerase III, alpha subunit + Term 44154 - 44219 14.8 - Term 44145 - 44202 13.5 41 28 Tu 1 . - CDS 44218 - 45642 1421 ## COG0165 Argininosuccinate lyase - Prom 45790 - 45849 80.3 + TRNA 45771 - 45847 88.0 # Pro TGG 0 0 + TRNA 45863 - 45939 90.6 # Arg TCT 0 0 - Term 45937 - 45976 8.2 42 29 Tu 1 . - CDS 46035 - 48875 2854 ## COG0525 Valyl-tRNA synthetase - Prom 49001 - 49060 2.5 - Term 48940 - 48983 3.1 43 30 Op 1 . - CDS 49062 - 49472 359 ## 44 30 Op 2 . - CDS 49506 - 49910 295 ## Bmul_0829 DNA polymerase III subunit chi - Prom 50126 - 50185 78.0 + TRNA 50109 - 50184 80.6 # Ala CGC 0 0 + Prom 50110 - 50169 77.7 45 31 Tu 1 . + CDS 50363 - 51685 122 ## COG0582 Integrase + Term 51698 - 51730 1.5 46 32 Op 1 . - CDS 51725 - 51931 110 ## 47 32 Op 2 . - CDS 51967 - 52737 362 ## COG3617 Prophage antirepressor - Term 52742 - 52787 4.1 48 32 Op 3 . - CDS 52803 - 53654 682 ## COG3646 Uncharacterized phage-encoded protein - Term 53800 - 53839 -0.3 49 33 Op 1 . - CDS 54021 - 54341 296 ## 50 33 Op 2 . - CDS 54338 - 54811 131 ## AZL_011870 hypothetical protein - Prom 54847 - 54906 4.0 - Term 54874 - 54939 13.7 51 34 Op 1 . - CDS 54951 - 56027 879 ## Slit_1947 hypothetical protein 52 34 Op 2 . - CDS 56033 - 56968 791 ## COG5377 Phage-related protein, predicted endonuclease - Prom 57181 - 57240 4.1 + Prom 56930 - 56989 3.5 53 35 Tu 1 . + CDS 57142 - 57264 73 ## 54 36 Tu 1 . - CDS 57607 - 57849 228 ## 55 37 Op 1 . - CDS 58001 - 58294 212 ## 56 37 Op 2 . - CDS 58306 - 58467 62 ## - Prom 58489 - 58548 1.9 - Term 58474 - 58514 4.0 57 38 Tu 1 . - CDS 58631 - 58936 225 ## - Term 59353 - 59382 1.1 58 39 Tu 1 . - CDS 59408 - 60067 269 ## COG2932 Predicted transcriptional regulator - Prom 60112 - 60171 4.4 + Prom 60087 - 60146 4.1 59 40 Op 1 . + CDS 60189 - 60452 67 ## 60 40 Op 2 . + CDS 60463 - 61695 666 ## 61 40 Op 3 . + CDS 61692 - 62357 275 ## + Term 62566 - 62598 -0.8 62 41 Tu 1 . - CDS 62296 - 62766 311 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319803776|gb|ADMF01000038.1| GENE 1 3 - 321 205 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRA >gi|319803776|gb|ADMF01000038.1| GENE 2 700 - 954 66 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MANTVRMMVIAIFRVIKAPYIDRNLSIINCYAETVHVFRNFVHVIKNRLVGAPVHVIEKT VYVHENCCSRVLRILKRYISRRLL >gi|319803776|gb|ADMF01000038.1| GENE 3 1289 - 3592 1379 767 aa, chain - ## HITS:1 COG:no KEGG:pRALTA_0410 NR:ns ## KEGG: pRALTA_0410 # Name: not_defined # Def: transposase, IS6 family # Organism: C.taiwanensis # Pathway: not_defined # 198 664 106 503 532 87 22.0 2e-15 MLRTASDISALTPEQLRELVASLQKDVVSREKHVTALEQNVALLEKEVKAEHEKRCKAEC DLWAQREAVKENLPALKAAMREFSREAGPYGDLLSMSIYEQVSFLCSELIRLARDAAMYR HEHYGHGPDMPGTKGAVREVTPDDVRSVFKGTRNTMQSMARQFQALTRAAGRLDDADPVR IGLEHAASLRAVNKPNTERKNLGRRPNPPKKPPKRQETVPAESLPCTGRDPKTGKVCRGK LKPISEIVAKLKTKHTRMADQIEFLETHNQIYYCEACGEVFIPTADNQEVPIVPNREIGH KLLVECALGVCSGTPISRASAEFQDACSLGSDTIQRNFNDFGQIYLKPLMLALKEELKTR PTVVADESTLDVLELQGRGHQSAKTHEAAEPISGNYFLALTTPAQTDYPVACYEYMGSSS LKRLREMLGDTFRCEALAADGYAAYDSLIAQGFGLNGKAVRQSCLTHLRRRLCQAIGAEA LKQQAEAFADEELASINLESLKAGDPDRELMAAVVILGAVYAVEQRCAREPHETEADWLV RLAKARKEKSTVLMDDLDRIMLKLSSGRIEPTSNAKSWRSIRKSDPYAAACIYYMNGRQK FRTFLSDPRIPPSTDIVEGRIRPVTVLRKNIYFMQTLRGAEAMMAAYSLVQTGKLNGMDV RTWLSDFVAAAYMHCVRKAWRYALQEGKDPTRKIMDYNVSPLAEVKAAAQADPDDDMART RLAYNMHHLIEDFDFTAWLPRNCAERYQNECEVDFHDVACDIVQIGE >gi|319803776|gb|ADMF01000038.1| GENE 4 3759 - 4109 291 116 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIDFSDKRVTMVVCPVDGRYGFYALSDLAFKLLHIDIYKQEDYVVFVSRSRGICKIICT DECGTTLITRKLHKGRFERLLMQAQGPAAMTVTPQMLADFINGKPLFVKRESLWQG >gi|319803776|gb|ADMF01000038.1| GENE 5 4100 - 4507 230 135 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MITLSRPINWAYYYYGWRNSGLSFLAFYERVFEQAYPPISKAEVIAGFMLYHESDQPRPH SKPVRHFRQIWESSAAPDSNTVRIIIFAECPAAEPLAENPPKRLSAQSVLPVRVKPHRAV QSTLDLLRSSEESWQ >gi|319803776|gb|ADMF01000038.1| GENE 6 4576 - 4770 78 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRLQWFKQAIEKIYIPQFVKGGDDSGDGGNGVLKINFDGTVETVANMSRIYSKRGFWQV VVRR >gi|319803776|gb|ADMF01000038.1| GENE 7 4808 - 5407 288 199 aa, chain - ## HITS:1 COG:no KEGG:Ppha_0885 NR:ns ## KEGG: Ppha_0885 # Name: not_defined # Def: hypothetical protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 7 181 48 249 570 104 34.0 2e-21 MKSERIGKICPETGEIIPCRPKRKAEPVNNLSADIAPEATATRTNTGGTDLLEWAGRTSG LDAKVRAAFSGSEDPFGCPLLGDDLGLDETGMQRLFQALANDVEDGSPVFALDSTTTSSH SRNLDPYIRDGFNKAGDSLAAYKLVTFYSIASRLPVSFEMQPGNISDVSCVTNAIKRAQS YPGFFMLGPERTGYFSLSD >gi|319803776|gb|ADMF01000038.1| GENE 8 6020 - 6385 113 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYKLAGKFYYLNEPGLNICVSDISLSRNNATKDLFLHGIFVVLENLKSELIRLNKYDEA EYASMCQRILGWALIEKKSLDVTYFIFYYRAFNFLKNFNAVPKWMKPTFLAVIRLLMFRK L >gi|319803776|gb|ADMF01000038.1| GENE 9 6977 - 7390 145 137 aa, chain - ## HITS:1 COG:no KEGG:HAPS_1021 NR:ns ## KEGG: HAPS_1021 # Name: not_defined # Def: glycosyl transferase, group 1 # Organism: H.parasuis # Pathway: not_defined # 13 136 256 379 381 125 50.0 4e-28 MMREYLPPNNPKNLIFKGHVDGEEKKELLKSARILINTSIWEGIPISWLECLSYGTVIIS AFERDDLVSRFGEYVGEVPGDGFDSVNRFKIAIDEYMNNDELYVLKATQAIEYTRSNHSI KKFKETMKHVIHSVAKD >gi|319803776|gb|ADMF01000038.1| GENE 10 7387 - 7680 57 97 aa, chain - ## HITS:1 COG:no KEGG:AB57_3400 NR:ns ## KEGG: AB57_3400 # Name: not_defined # Def: glycosyltransferase # Organism: A.baumannii_AB0057 # Pathway: not_defined # 6 97 157 249 383 104 56.0 8e-22 MNEEKRIKFITQGNSLNPLALELYNLENTVPISYVPNPIEIDFEYRFNLNQKNTIIFLGR LEAQKRCWIFCEIARQMPQYNFIVLGNFFRHIDDNKK >gi|319803776|gb|ADMF01000038.1| GENE 11 8433 - 8513 58 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDFLYSKASPCLRNALSLESFDNPIY >gi|319803776|gb|ADMF01000038.1| GENE 12 9272 - 10270 -99 332 aa, chain - ## HITS:1 COG:BH3714 KEGG:ns NR:ns ## COG: BH3714 COG0463 # Protein_GI_number: 15616276 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus halodurans # 6 206 4 204 271 152 40.0 1e-36 MTSEKQLTVLMPVYNTRKEWLDEAVKSILDQTYKNFSFLIIDDGSIKETADYLDTLATKD KRITVLHNEANQGLVYTLNRGLAFATTPWIARMDADDWAFPDRLSKQMEYLNKHSGITVL GTDAIYLETGRPTRKIQPLSHTQIEACLPFYDCFVHPSVILRREDILKIGGYPNSLYAED YALWIKILFKTDYKMEILPNTLMKYRRGESRPTYRRIQTKSTFELLEKIAKYLNTEVPYY WNHSQEKDFRLSNEQALDSIKTLSYIASILNIKFPDIDKDFLDLSLLREKKKIYRLATCS GIQDFIKNLNVQVSYLALCLKIKLSRQMSSRE >gi|319803776|gb|ADMF01000038.1| GENE 13 10323 - 10787 234 154 aa, chain - ## HITS:1 COG:no KEGG:BC1002_0886 NR:ns ## KEGG: BC1002_0886 # Name: not_defined # Def: glycosyl transferase group 1 # Organism: Burkholderia_CCGE1002 # Pathway: not_defined # 2 148 213 360 364 102 36.0 5e-21 MSHKRKGFALLKEYFTTTPYDECLIVAGRPIDGEYKNIQYVGFVNEMQEMYQACDYSVLA SFYDPLETVGMESVWNGTPSLIAETIGSCECVDPEALRSFDAWSLESFKKVMDDVRKAPL KITPSYQRYVHVPLDLTIDEHVRELIELGKGFSQ >gi|319803776|gb|ADMF01000038.1| GENE 14 11081 - 11785 245 234 aa, chain - ## HITS:1 COG:NMB0919 KEGG:ns NR:ns ## COG: NMB0919 COG3039 # Protein_GI_number: 15676814 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS5 family # Organism: Neisseria meningitidis MC58 # 45 223 127 297 319 64 31.0 2e-10 MKAFVKELLGKRFAAVSLRRHAWSYREIFVKSGLCESITYAHLEELREQGLLGNTGAMIL DGSFVEAPKQRNTREENQLIKQGRGGELWNDQPAKKRQKDVDARWTKKNNEVHYGYKIHA LADASSKFLIHNVATPANVHDSKALNWVLNEEEDEGRVLYADSAYAGKELEEIVRYFNVT PCFCEKGRVNHPLTAKQKAHNRKKSKSAAVWSISSATFRRSSRARSCAASLQAG >gi|319803776|gb|ADMF01000038.1| GENE 15 12246 - 13601 728 451 aa, chain + ## HITS:1 COG:MA2907 KEGG:ns NR:ns ## COG: MA2907 COG3547 # Protein_GI_number: 20091728 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Methanosarcina acetivorans str.C2A # 28 427 8 398 414 118 26.0 2e-26 MANSKTRADRIISRQLSHCTVEAAHLSAVGIDVHHDQLICCFQKLDPIAGELTSEHRSFG TTIPQLLEFAAWCRVRESSVILMESTGVLWFSPYRSLEDVGFDNDTLALVNARDVKAAVG RKTDAQDAKRLAEYARLGKFHKSFVPSRPFRDMRMVSRDIIRLSDDISRQKNRYNKNLNS VGCRATSVFSDVHGKAAGKILDAYIRGDRDFEEIVRSARKQLRATQQEILEAINFAMSDA LRELLRSSYEHLQYLIARRDSQIALLERMQAPYQEYIDRLMTIPGVKELSARLLFCEFTN EQQSFPDAAHFASWLGLCPGNNKSAGKSSSGKTPKGNRWARKTLTEVAHGIGLMKRGALK ALFQAFKERRGARRAVVAIAHKVAMIMFAMIWDGSEYVETTCSALRDTRVKRLLQTSKNL REQRTVITLSGQIVDKDTGELIGQLSVDAAT >gi|319803776|gb|ADMF01000038.1| GENE 16 13895 - 14371 378 158 aa, chain - ## HITS:1 COG:RSc1513 KEGG:ns NR:ns ## COG: RSc1513 COG0328 # Protein_GI_number: 17546232 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Ralstonia solanacearum # 12 150 6 144 151 177 62.0 9e-45 MTHAPTPTVLEIWTDGACKKNPGVGGWGAWLVWGKYTLELYGGSALTTNNQMELTAVIRA LSAVKRPCPIIIHLDSSYVKDGITRWIHGWKKNGWRTADKKPVKNGELWQELDRLVSQHQ IDWRWVKGHAGDPGNEKADALANLGVEAARGERPEKLS >gi|319803776|gb|ADMF01000038.1| GENE 17 14368 - 15246 558 292 aa, chain - ## HITS:1 COG:RSc1514 KEGG:ns NR:ns ## COG: RSc1514 COG0500 # Protein_GI_number: 17546233 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Ralstonia solanacearum # 52 286 1 249 257 135 38.0 1e-31 MFQRFFGRSERPDKGAGALPARLTFDGFLRTSPGRLLLEWEAEAYDELTVDVFGSCALQI GMPELNTLAENRMQSKWLIELQSTVSVSADVLSGDLGCIVAAPELLPIADESMDLVTLPH VLELSPNPQQALHEAVRVLEPEGRLILTAFNGAGFWWMRQQTVRLGAKPYLPTDMAPIPL RRLKDWFALLGLEIDRGRFGLYRPGFRSARRLHAWEWLDKAGDRWLPQCSNILLLSAVKR RPGARIVNCSEFANIPAKVPTSGVPAAGRVSSTFSQTSITPSAPIAENHKAP >gi|319803776|gb|ADMF01000038.1| GENE 18 15404 - 17515 1131 703 aa, chain + ## HITS:1 COG:RSc1516 KEGG:ns NR:ns ## COG: RSc1516 COG0741 # Protein_GI_number: 17546235 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Ralstonia solanacearum # 68 453 60 447 451 309 46.0 1e-83 MNPSSFRSALTQLSVALFIATAAVHPTYSFAEDVPQDAQTNASAGGTVVETALTEAALER ESAVPASVWDRIRGGFGIPELNSPLVDRWTTYYAKDPEYVQRMAMRASQYLYNIVEEVES RGLPMELALLPFVESAFQPEALSRAKASGLWQFMPATGADYALEQNLWRDDRNDVLESTR AALDYFEYLHGMFNDWQLALAAYNWGEGSVRRAVERAKRSHKATDYAHLKMPRETANYVP KLEAIKRIVKDPGRYGIELPDVGNEPFFVRITKPRDIDLKTAAELAGMSEAEFRQLNPSF KLPVIVASHNNVMLLPADRLDFFVDNLASWMDSGQPLSRWTTYRLQAGDTLASVAERSGM TESFLREVNGIPAGRKVLPNSTLLVLADADEQTDIAAEEADAKLRLSPLTTWRRVTYRVR SGDTLSSIARRWHITVKSIVQGNRLRSDRLHSGQRLVLTVPNVAREPIRTAAKTSAPSSS GHVIYAVKRGDSLASIAQRYGVSTASLKTTNRLSSNTIRAGQRLRIPKSGEPIEEETTTY VVQQGDTLTSIANRYGVSVVKLKRLNRLTSNALKAGDRLEIPESDAPKAPPAPATAASPR TTVHSVVSGDTLTSIAERFGTTVAKLRSANGLRSSRLSIGQRLVIPASASKVASASELRR YRVRSGDTLTSIAAAHNVSIADLMSFNGLTTSRLNVGQSLRIP >gi|319803776|gb|ADMF01000038.1| GENE 19 17715 - 18506 1111 263 aa, chain + ## HITS:1 COG:RSc1172 KEGG:ns NR:ns ## COG: RSc1172 COG0623 # Protein_GI_number: 17545891 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Ralstonia solanacearum # 1 260 1 260 264 329 68.0 3e-90 MGFLTGKKLLITGVISNRSIAYGIAEACHREGAELAFTYSDERFAERLKGFAAQFGSDIV LPMDVTKDDQIAAVVETLTEKWGGLDGFVHSIGYAPRESIAGDFLEGFSRDAFHTALDIS TYSYPALAKAFLPMMKGRNASCLTLTYLGGERAVPNYNTMGLAKAALDASTRYLAQSLGR EGIRANAISAGPIKTLAASGIKGFSKLLRVMEKNAPLGRTVTIQEVGNTAAFLLSDLASG ITGNICYVDAGFHAVAVADVEED >gi|319803776|gb|ADMF01000038.1| GENE 20 18604 - 19386 311 260 aa, chain + ## HITS:1 COG:NMA1958 KEGG:ns NR:ns ## COG: NMA1958 COG0463 # Protein_GI_number: 15794841 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Neisseria meningitidis Z2491 # 10 258 4 251 254 279 53.0 3e-75 MVEDNEKNAKRISIVLLTRNEVHNIEACLKSCSFADEWIVVDDGSSDGTVETARRLGAKV FSRSLSGDWAAQKNFGIEQAAGPWIFLIDADERVTPDLAKELQEAASGSRCAYFVQRHNA FRHIHATHGILRPDWVCRMVPKMAVKVYGRVHEEIRVNCEKKRLSGTGLTHYPYRSWKLY FNKFNTYTELSAEKYLEEGRNVSFVKDIMLRPIWAFLKVYFINGGVLDGRAGFIFSINHA FYTMNKYVKYYFLKYYSGEL >gi|319803776|gb|ADMF01000038.1| GENE 21 19404 - 20291 370 295 aa, chain + ## HITS:1 COG:RSc2650 KEGG:ns NR:ns ## COG: RSc2650 COG0061 # Protein_GI_number: 17547369 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Ralstonia solanacearum # 13 285 24 297 302 260 47.0 2e-69 MKTVGVFVKPTENLSEPLEHLVSVLRRAGCQVLLEERAAQALGNPDGGFPRPELGRRSDV AVVLGGDGTLLGVARQIADSHCPLIGVNAGRLGFITDVVLDDMDRVLPAMLAGECSADQR HLLEGVVFRNGREIFRNVAVNDIGFSHGRAGGMVDFIIYVDGKQMSAQSADGVVCSTATG STAYALAAGGPILHPSMDAVVLVPVAPHTLSNRPIVLPSSKRIEIELVNARDATAYFDMQ EFCDVEPGDMLRIQRSERVMEILHPLSYDYYDLLRRKLKWNYSPTSVKHHEQISG >gi|319803776|gb|ADMF01000038.1| GENE 22 20306 - 21973 960 555 aa, chain + ## HITS:1 COG:RSc2651 KEGG:ns NR:ns ## COG: RSc2651 COG0497 # Protein_GI_number: 17547370 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Ralstonia solanacearum # 1 549 1 549 569 432 49.0 1e-121 MLTTLNLKDFVIVDQLALDLSTGFTVLTGETGAGKSILIDAIQLIRGARADADMVRKGAE RANIIAEFMPSEEALRWLEINDLQDSSASTVLVRRSIDKNGRSRAWINGITVTLSQLKEL GDTLVDIQGQHAHQLLLKTQNQLKLLDAYAENTAQLEAVKKAFATWNAEAKRLEEASSSA EVRTAKIEQLTWLLEDLSALAPKKGEWESLNEEHTRLSHGVSIIEGLTASVDWLTQGEDS ASDLVSRAQSRVDDLSNYDERLKGVSETLTTAAELIDDAAHDLERILDKTEADSNRFEKV DRRVSKYFTMARKYRTEPEVLYAFEAENKRRLEELQNDENLDALRTEEAEARAIYDAAAE RLSKVRREAAARFAKAVTNEMQTLSMKGGRFEVKLVPIPRSEVGVEKCEFLMAGHPGVDV SPLAKVASGGELSRIGLAIFTLTSRNTSVPTLIFDEVDSGVGGATGEVVGRMMKQLGQTR QVLCVTHLPQVAACGDHHLKVEKVSDGIETVSYLRELNPTQRVEEIARMLGGLLITQKTK VLAEEMVKANLSQEE >gi|319803776|gb|ADMF01000038.1| GENE 23 21945 - 22247 122 100 aa, chain - ## HITS:1 COG:Cj1135 KEGG:ns NR:ns ## COG: Cj1135 COG0463 # Protein_GI_number: 15792460 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Campylobacter jejuni # 13 93 432 512 515 64 37.0 4e-11 MRKLKPTSWAKVRTCNLGIWRQDFLAVNGFDEAYEGWGFEDSDLAIRLINLGMQRKLGLF ATTVFHLYHRENDRHLAGINRQRLEQRLQNKITLPEKGLL >gi|319803776|gb|ADMF01000038.1| GENE 24 22736 - 23686 517 316 aa, chain - ## HITS:1 COG:NMB1527 KEGG:ns NR:ns ## COG: NMB1527 COG0859 # Protein_GI_number: 15677379 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Neisseria meningitidis MC58 # 11 293 10 298 336 72 25.0 1e-12 MNNFYITCRIPNHVGDCCMALPGLRLLEASGLTPVLTGKRWAEDLLAGTGWRFEPIEGHV TEDLDRMRNIARRWGGHPKGLLFPNSFSSALLYRIGGIRSAGFPTDFRRILLDKVVPEPN TMMHEVERFFRLAHEALEAWDIKPAWDKVPPSLGLKPLKRHEAGARNVIAQCGIPANYAL LAPIARGLHHGKEKHWKHFNELCRPLRDMGIEPVVFPAAREVELAKAACPDAKICPPTSL GTIAALAKHARVVVANDSGMSHVAAAVGANQITLIGVTNPVRTRPWNPRAIVLGSENGWP TVDEVLGAMKKIVNAS >gi|319803776|gb|ADMF01000038.1| GENE 25 23705 - 24016 182 103 aa, chain - ## HITS:1 COG:no KEGG:Bphy_3923 NR:ns ## KEGG: Bphy_3923 # Name: not_defined # Def: glycosyl transferase group 1 # Organism: B.phymatum # Pathway: not_defined # 5 80 249 324 356 72 42.0 5e-12 MEVIYKFVDYLILSSRYEAFGMVAIESILSGTPVILSKNIFSNEIIHPEAKILFDGLNEG SLETAITSAIQHKHKLNNPLQYILSPDTEEEHVTKILQAAHLF >gi|319803776|gb|ADMF01000038.1| GENE 26 24430 - 24504 57 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELFRATDILEPAFASVAERIRGI >gi|319803776|gb|ADMF01000038.1| GENE 27 24991 - 26646 282 551 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 308 535 129 354 398 113 32 3e-24 MIAGGGASSLIALVLGKLTDMAFYQQDAVVVYLAPVALLGISVLHGGSQYLSQFLLVRVA QGVMLELRTLMFERILHWGDDLFMKYRCAEVQAKFINEASTALTNAAGVLTIIIRDSIQI VCLLGVLFWHNWLLTLVTFIVGPVIALILKWVNRHIKRLTTQTQQTFGELIGTIQESYSG ERVVKVYDGYDYESARFRDVNERLRSLTLKAQKVYSTGTPLTQFASMAGVSIVIVFALMQ ANMGLLTVGEFTTFLAAMLLLLPPIRKLSSVNGTTAAMTAAAESLFRVIDELPEKDAGTK TLENYSGAVEFRDVSFAYPNEDKQTISHFSLSVKPGEMIALVGSSGAGKSTLINLIPRFW VPTEGEIYFDGIAQSELTLKSLRKQIGLVSQDVTIFDDTIANNIAYGCRDKVTREQIEAA AEAAALTDFIKTLPEGLDSPAGPNGNHLSGGQRQRVSIARAFLKNAPILLLDEATSALDT ESEKHIQKSLDTLLKGRTSFVVAHRLSTIINADRIIVMKDGRIAEIGTHEELLANGGLYN HLYTLQFSKEN >gi|319803776|gb|ADMF01000038.1| GENE 28 26656 - 27603 425 315 aa, chain + ## HITS:1 COG:STM4400 KEGG:ns NR:ns ## COG: STM4400 COG0697 # Protein_GI_number: 16767646 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Salmonella typhimurium LT2 # 1 305 1 307 321 162 32.0 6e-40 MFIGIIFGIIACALWGLVYIIPLWLSTYDPMLIALARYTIFGLFSAVLLVFNGKYLTQVS KKDWISATALGVVGNLFFYWLLASAVQLAGAPIAGAFTAVIPISVAIVANSSARRCGAGV PWSSLVFPLSLVAAGMVCLNWTEFSYFLANSNESPAGFWLGVFYAFLSLLVWTWYPISNA NWLIAHPKISPMFWTAAQGAATLPTAAIGLAAYAAMTESSTSLWEPTPTHFFIGVLFLGI VCSWLAICFWNDMSRRLTPALGGQMIIFETIFAVIYAHIMRQALPTTLMSVGMVLLLAGV FASVRVFHCTKIKAM >gi|319803776|gb|ADMF01000038.1| GENE 29 27590 - 28669 378 359 aa, chain - ## HITS:1 COG:ECs4507 KEGG:ns NR:ns ## COG: ECs4507 COG0859 # Protein_GI_number: 15833761 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli O157:H7 # 2 282 7 298 352 92 27.0 1e-18 MKFLIVSLRYLGDCLLAAALAPALKARFPDAQIDMLTFKDNAPILEGVQDISHVIGVEHH PNKFVQACSHLASWNKYDWAFITMNSTRTVLYGYFAAKHQVMVRPYPSLEELWKRILITD QIDFVGGQILERTQPLLGPLFKGTAPKLCPIYPDRELSTDLQAKLHMLGSYVVCQCNSRY QDKNWGIEKWIELAHLLMTAGHGICFTGGSGDIDYLLKITEALPPQKTFIAAGHASFGQT SRIIVGAVAYIGVDTATSHIAAATGIPCVCLYGPTPVDTWGPAPKCGQSTPYSNDLDIQT VGNVTVVRRDNTDIPCSGCTRHLCAHYNPPQLSRCMQSISVEKVWNALCCHTPIGSTLL >gi|319803776|gb|ADMF01000038.1| GENE 30 28720 - 30216 700 498 aa, chain + ## HITS:1 COG:RSc2197 KEGG:ns NR:ns ## COG: RSc2197 COG1530 # Protein_GI_number: 17546916 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Ralstonia solanacearum # 15 497 3 488 489 540 61.0 1e-153 MCTLFKRQVEHRPVEQILINTSREETRVAILDDGLLQDLFIERACARGLVGNVYWGQVVR VLPGMQSAFLDVGLERTAFLHIAEIEGARTDTGTFKPIESLLHEGQRLMVQVAKDPIGTK GARLTTTISLAGRKLVYLPNDSHIGVSQRIEDAALREELRTLATTVRQKDEKGGYIVRTC AEEGATEQEFLSDMAYLARLWDGIRHRAQEVKKPTLLYQDLTLAQRTLRDMVHEGTAVIE VDDEAEYEALLEFAKHFVPAAVDKLHHYEGERPLFEQYDIDEEIELALGRRVELKSGGYL VFDQTEAMSTIDVNTGAYVGKRDFSDTVFKTNLEAAQVIARQLRLRNLGGIIIVDFIDMA KDEHREAVLSELRRAVLLDRTKMTVSGFNELGLVAMTRKRTRESLAHTLCETCSVCGGRG EIKTARTVCYDILREITRLAKLYKEMKEFRILASQTVIDLLLEEESQALELLQQAIERPI LLEVESVYTQEQWDVIIA >gi|319803776|gb|ADMF01000038.1| GENE 31 30236 - 31759 487 507 aa, chain + ## HITS:1 COG:RSc3125 KEGG:ns NR:ns ## COG: RSc3125 COG2925 # Protein_GI_number: 17547844 # Func_class: L Replication, recombination and repair # Function: Exonuclease I # Organism: Ralstonia solanacearum # 10 501 12 486 489 355 39.0 1e-97 MTQSSMGAQSVETTFYWYDYETFGVDPRKDRPAQFAGRRTRLDFSPLSGDTGEIFYCRPT EDQLPNPESCLLTGITPQYCAEKGVCESEFADLIWERLNTPGTVSIGYNTLGFDDEVNRF LFWRNFLDPYTHSWAKGCSRWDLFPVVCAAWALRGDTIKWPRWEEIDPIKYPKAEGRKGV CFKLEFLTKANGIEHGHAHDALSDVEATIGMAKLLAEREPKLWRWAFENRTTAKVSAAVA DMKPVVWVTPKFGIARGCTGIAACFFQEKHDCWMWDLSFDPTVLQSLSYEEIKQRLFPSI KERAQGIERLPIRRLKANASPFVCANLKVLSRERAQKYGIDLDVAAANLQKLKAVAPAVQ TIFAELAAERRSNDAAAPSADPDRSLYSGFASSGDKARFVQIRSMMPEHLAAEAPKFRFD DQKFAEMLFRFRARNWPEMLSAEETERWRQFCADRIMSGRDGMLQLSDYFDQIDEAQASG LYDDERHQQVLEALYDWGETLGNRLSD >gi|319803776|gb|ADMF01000038.1| GENE 32 31851 - 33287 1100 478 aa, chain + ## HITS:1 COG:PAB0912 KEGG:ns NR:ns ## COG: PAB0912 COG1794 # Protein_GI_number: 14521575 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Pyrococcus abyssi # 235 468 4 225 228 171 41.0 2e-42 MGRKKIGLTSGLNPLPALKMKSCLIGVGAKLDLPVEVVESNVELPLDAPTPRIALADRKI TALIALEHLQRQGCEAAVLADIKSEPFLDELRKELEMPIVSLLAKLDDKVKSGTIQTMAC LGTAVPQEFFAEHFGPAVKWVSPDEEMKAEFAKIQNPCEGLRRNGLTPAFKAYLVKAGHE LMAQGAEVLIPNCSQMARFVEELRAEGLPVEDLLSDAAEMAVASTPARRPKPFKVGLIGG LGPAATVDLYDKIVKATPAKTDQEHIKLVVEQNPQIPDRTACLLNGGEDPTLALFHCAQR LEADGCSTLIVPCNTAHAFLPYLERFIKIPFINMQQAALDEIQNKLGTRAKIGLLATTGT VQTGIYGDKANAMGLPMFVPDDVHQERVMAAIYGPQGAKAGYTNGICREDLISAAEYLVK THGCNCLILGCTELPLILDESDDFEVAGSRVIVVDPTAALARKVVKTAEDAYAATGIR >gi|319803776|gb|ADMF01000038.1| GENE 33 33355 - 34248 594 297 aa, chain + ## HITS:1 COG:PA1576 KEGG:ns NR:ns ## COG: PA1576 COG2084 # Protein_GI_number: 15596773 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Pseudomonas aeruginosa # 14 296 4 286 288 347 64.0 1e-95 MQQKNYPQMPSIKVAFLGLGVMGHPMAGHLARAGLDVCVYNRTAAKAIEWAAEFGGQAAS TPREAACGAQFVFACVGNDDDLRSVVLGENGALAGMDPGSVFVDHTTASAVVERELSQKA AERQIGWVDAPVSGGQSGAENGCLTVLCGGTNTDVSAAEPVMRTYASQITHFGAVGSGQL AKMVNQICIAGCVQGLAEGLAFGMHAGLDMPKLIKALSGGAASSWQMINRGTTMVEGKFD FGFAVDWMRKDLGIALAEAERNGSKLDIAKMVDSYYQEVQQMGGGRLDTSSLIKRLV >gi|319803776|gb|ADMF01000038.1| GENE 34 34534 - 34836 68 100 aa, chain + ## HITS:1 COG:MA3780 KEGG:ns NR:ns ## COG: MA3780 COG1898 # Protein_GI_number: 20092576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes # Organism: Methanosarcina acetivorans str.C2A # 2 84 95 177 183 89 53.0 2e-18 MFGQVVCCQLSAENHRQIYIPKGFAHGFSVLSKYAVVSYKCSDFYVPESEGSIAADDPQL GIDWHIPAEQYIRSNKDLNAASFEAYCQTPAFHFTKGCMR >gi|319803776|gb|ADMF01000038.1| GENE 35 35310 - 35687 143 125 aa, chain + ## HITS:1 COG:sll1395 KEGG:ns NR:ns ## COG: sll1395 COG1091 # Protein_GI_number: 16329215 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Synechocystis # 1 113 152 267 280 72 39.0 3e-13 MLQLLSERQSLGVVSDQFSAPTLAEDLADALVELYLQGAHLRSMQVLHFTNTGETSWLGF ASAIQERIGTTCKLEAIPAVQYPAKARRPHYSVLSLQSLQAWRIKPRSWQDALTEACVQC GRIKS >gi|319803776|gb|ADMF01000038.1| GENE 36 35903 - 36703 236 266 aa, chain + ## HITS:1 COG:CC3629 KEGG:ns NR:ns ## COG: CC3629 COG1088 # Protein_GI_number: 16127859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Caulobacter vibrioides # 9 257 82 332 356 291 56.0 7e-79 MEEYDVTGVIHFAAESHVDNSIADPMRFVFTNIHGTTVMLDAALRYWQRTGRLVSSRFHH VSTDEVFGTLGESGFFDENSAYAPNSPYSASKAASDLMARSYAKTYGMNVTLSNCSNNYG PWQHDEKLIPTIIRRCLAHTLVPLYGNGLNVRDWLWVNDHCRALDLIFHQAAPGARYNVG GHCERSNLDIAEGICRLLDEMHPWSGHQYRELITFVDDRPGHDFRYAVDAQKLERDLGWK PAMPFLVGLKQTVEWYLARYQAAGEI >gi|319803776|gb|ADMF01000038.1| GENE 37 36828 - 38897 1983 689 aa, chain + ## HITS:1 COG:RSc0791 KEGG:ns NR:ns ## COG: RSc0791 COG0008 # Protein_GI_number: 17545510 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Ralstonia solanacearum # 381 689 279 580 580 366 57.0 1e-101 MSEITEAQTGRATNFIRNIIEEDLAAGVNQPRLWCGHPAPYSEQAANGVPDPAKIRTRFP PEPNGYLHIGHAKSICLNFGLARDYGGRCHMRFDDTNPVKEDQEYVDGILDSVRWLGFTW EHDGEKNLYFASSYFEYMYQFAEHLVRTGYAYVDEQTADEMRDNRGTLKEPGKNSPYRDR PIEENLRLFREMREGKHAEGSMVLRARIDMASPNMNLRDPAIYRIRFAEHHATGDKWCIY PMYTFAHPIEDSLEEITHSICTLEFEDQRAFYDWALERVVPVLRTPQFEEAKAVLTQMKD RTHPKAAEFAAACFAAREKLGQSAVEQSAASILNGWTNGVPDVSDASVKALFELLTDHPE HFTPLLQSALSAVIRPNFFLLSHQYEFNRLSLTYVVVSKRKLIQLVKEKYVDGWDDPRMP TIIGLRRRGYTPQSMQMFAERCGISKVSGGWIDYSVLEQCLREDLEGCAHRRMAVMKPLK LIIDNYPEGQSEELVAENHPQKPEMGSRSITFSRELWIEETDFAEVPPKGFRRLTVPADG SPAKPVRLRYGYVIVPTSFEKDAEGRVTAVHANYLPETKSGTEGSMSVKTKATIHWLDAQ TARAAEFRVYDRLFNEPNPEAGEGTFLDHLTPNSKTILQGYVEPCTADAANEERFQFERT GYFVADRKDHAPEHPVFNLSVGLRDSWGK >gi|319803776|gb|ADMF01000038.1| GENE 38 39098 - 39427 646 109 aa, chain + ## HITS:1 COG:no KEGG:ECA2794 NR:ns ## KEGG: ECA2794 # Name: not_defined # Def: hypothetical protein # Organism: E.carotovora # Pathway: not_defined # 1 109 1 115 118 75 42.0 8e-13 MKKIIVATAAALLAVGAQAATYKDGSYTGEGKGRESVITVQVDVKGGKIADVKVVKHGET EMIIAAPIEQMIPEIVKKNGVEGVDSVGGATLSSEGIKAAVKDALSKAQ >gi|319803776|gb|ADMF01000038.1| GENE 39 39544 - 40641 1126 365 aa, chain + ## HITS:1 COG:TP0796 KEGG:ns NR:ns ## COG: TP0796 COG1477 # Protein_GI_number: 15639783 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Treponema pallidum # 40 354 27 355 362 171 35.0 2e-42 MFARKIFWIAAAAALCASLPVLSIHAAETAAAAESEQQEAKEYELDTTTFHMGTVVQIKV FGKTPEETKRFAQIVEDEVVRFDDMMSVHKDSPLNNVNKHAGEKVEVTPEIAEMTLEALT IADMTHSAFEPMIGPLVNLWKIGFGGDHVPSDEAIKEAIRRVDHRHVRVTEENGKWFMQI GRDQNVDMGAIAKGYIGQKLAEKLKAAGATHALLDLGGNIVAMGEKYPGTPWRIGLQSPD KSRGSYFAVVAASDTNVITSGAYERNFEKNGHRYGHILNPTTGQPVATDIASVTIVDQNG ARADALCTALFAMGWEKAEAFLLAHPDVHAVLLRDNLKDVLVSEALRDKIQPYDPEVSIR LLKQS >gi|319803776|gb|ADMF01000038.1| GENE 40 40742 - 44149 1994 1135 aa, chain + ## HITS:1 COG:RSc2205 KEGG:ns NR:ns ## COG: RSc2205 COG0587 # Protein_GI_number: 17546924 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Ralstonia solanacearum # 1 1060 1 1090 1173 1085 52.0 0 MPSPRFVHLRFHSEYSITDGIVRIDPMIHAVLEGGGAAVGISDLMNVFGGLRFYTHALAA GLKPILGCDLKVINPKDLNKPFRLGVLCMNHEGYHSLSVLLTKAFLTNNDAARGLVDPKW FDDGGSEGLIALSGAAQGELGSLLLGKKWALAHEAAERFKAQFPGRFYVELQRAGRPTDE LATARLANFAVEEKLPVVATHPIQFLKPEDFEAHEVRCSIAEGYTLQDPRRVKRYTPEQY LKSEAEMCELFADIPAAIENTVEIAKRCNLDGVLSKPQLPLFPTPDGMSLDDYIDQLSKE GLQKRLEFLYPDPKVLEERRPPYDKRLEYELGIIKGMKFPGYFLIVQDFINWSKTHGVPV GPGRGSGAGSLVAYSLGITDLDPLHFDLLFERFLNPERVSMPDFDVDFCQYNRDRTIDYV KRTYGVDAVSQIATFGTLGAKAVVRDVGRALDVPYMKTDALAKLIPMQPGRNISLDDAIA EVPEFKEAIERDDEYKEIIRLAKPLEGLTRNLGMHAGGVLIAPGKLTDFCPLYNSDGRPE NTISQFDKKDVENVGLVKFDFLGLTTLSILAKAVEIIDKLYPEQHFELERIPVDDAATYE LFQQANTAAVFQFESDGMRGLLKQARPDRLEDLVALNALYRPGPMDLIPSYIDRKFGREK VEYLDDRMEPVLKETYGIMVYQEQVMRVAQVVGGYSLGGADLLRRAMGKKNVEEMKRQRA VFIKGAGERGVKESVATEIFDLMEKFAGYGFNKSHAAAYSYVAYQTAYLKVHHTAAFFAA NLCMVMDDGDKMKALIDDARANGVDFRLPDVNVSEWFFSVPTENVIQLGLGAIKGINRAL VEAIVSEREANGPFEDIFDFAARVEGVNFRIFESMVRAGAFDSTDADRGKLFSNISNALQ GGAAVRQSAGQDSLFGGEETKKIVNWVEGEQWSFRRNLEEEMTAFGFSLSGHFFDEYKDD LRAIGCMPLDELQVSKENVCVGGVISSIRQINGKRGVMGVVGIDDGTHSIEFFAFSDLWA TLKTWIAPKMAVWVKGRPKYDDFSKKVTIYPEEIMSADDAVCARLKAITICVDSVDTLKT YSFLQQRSSNAEGYAPVINISVRTVDLSGNVQIYSSVEAIKKLMKTVKRKSVEYV >gi|319803776|gb|ADMF01000038.1| GENE 41 44218 - 45642 1421 474 aa, chain - ## HITS:1 COG:NMB0637 KEGG:ns NR:ns ## COG: NMB0637 COG0165 # Protein_GI_number: 15676537 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Neisseria meningitidis MC58 # 17 470 4 457 458 613 67.0 1e-175 MSQAQDNSNDPLHAKKKAWSGRFSEPVDAFVLRYTASVDFDKRMALVDIDGSVAHATMLA KVGVISEQDLADIKRGMAQIREEIQTGKFEWQLELEDVHLNIEARLTALIGDAGKRLHTG RSRNDQVATDIRLYLRGEIDEIIRRVEHLQEVLVAQAEKNYNVIMPGFTHMQVAQPVTFG HHMLAYVEMLERDHARLIDLRHRVNSSPLGAAALAGTTYPIDREYTAKLLGFETVAQNSL DAVSDRDFAIEFCAAASLIMAHISRLSEELVIWMSQRFGFIKLPDRFTTGSSIMPQKKNP DVPETARGKSGRVYGDLMSMLTLMKGTPLAYNKDFQEDKEPVFDAIDTVKDTLRAFCDMM AGVEPQPEAMHQAAQMGFPTATDLADYLVRHGVPFRTAHDIVGQTVRAAAERKCGLEELP LEVLQSFCDKIEADVYPVLSLEGSVKARNHVGGTAPNQVLAQVKRWEEIFNSRK >gi|319803776|gb|ADMF01000038.1| GENE 42 46035 - 48875 2854 946 aa, chain - ## HITS:1 COG:RSc2236 KEGG:ns NR:ns ## COG: RSc2236 COG0525 # Protein_GI_number: 17546955 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 944 1 964 968 1166 60.0 0 MTDKETQELAKSFEPNEIEARWYPAWEKSGCFKAGLDPKKPAFSIQLPPPNITGILHMGH AFNQTVMDTLTRYHRMAGYNTMWLPGTDHAGIATQIVVERKLEKEGISRRDMKREDFIAK IWEWQKFSGGTILEQMRRMGDSVDWDRLYFTMNPKLSKVVIETFVKLYEEGLIYRGKRLV NWDPKLQSAVSDLEVESEEADGHLWEIRYPGADGSEGVIVATTRPETLFGDQAVAVHPED ERYKSLVGKMLKLPLTDREIPVIADEYVDREFGSGCVKITPAHDFNDFEVGRRHNLAMLN VLTKTARMNENVPAKYQGMDRYECRKAAVEDLKAAGLLVAVKPIKHMVPRVSRTGEIVEP MLSEQWYMAMSKPAPEGSLYPGKSIAEVGLDAVESGEVNIFPAEWRGVYRQWLENIQDWC LSRQLWWGHQIPAWYDEAGRVYVARTEEEAQKQAGEGVKLTRDEDVLDTWFSSALVPFST LGWPHPEGDEKTAYDLYLPSTVLVTGYDILFFWVARMVMMTRHFTGRVPFKNVYIHGLVR DAEGKKMSKSEGNTLDPLDIIQGIDLEHLIEKNTRGLRQPEKAPIVEAKLRKNYPNGIAA HGADALRFTMAAYATLGRNVNFDLKRAEGYRNFCTKLWNATRFVLMNVEGKDCGVGATAN EPMQFSFVDKWIISEFERTVKEVTTAYEDYRLDNAANAIYSFVWNQYCDWYVELSKVQLR GSEAEQRATRHTLVTVLEAVLRLAHPIIPFITEELWQKVSVTAGVRKADEDAFLMLQTYP TFDAAKVDADAVARMTTIQAQIDSIRNLRSEMKLPPSQKMPLLISGPEAECAAAAAYLQQ LARLESVTHVEDLQQAAQGSVAPVAIVGDFKLMLKVEIDVKAERERLSKEAARLAGEVKK CQSKLGNERFVSKAPAAVVDTEKKRLAEFTALLAKVEEQLRKLPQA >gi|319803776|gb|ADMF01000038.1| GENE 43 49062 - 49472 359 136 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNRQEPVIDSRFLKCRTLKDRVDLSWETVENLTKQMQTPIPTQAPVQSQPVAEIEPQPFE PQPLILTEAEKKALIARLAPAVEAALRENLKNTVEMAAENAVTRIKADLERSVASTIQQA VAAEVQKLDLSDIIKR >gi|319803776|gb|ADMF01000038.1| GENE 44 49506 - 49910 295 134 aa, chain - ## HITS:1 COG:no KEGG:Bmul_0829 NR:ns ## KEGG: Bmul_0829 # Name: not_defined # Def: DNA polymerase III subunit chi # Organism: B.multivorans # Pathway: Purine metabolism [PATH:bmu00230]; Pyrimidine metabolism [PATH:bmu00240]; Metabolic pathways [PATH:bmu01100]; DNA replication [PATH:bmu03030]; Mismatch repair [PATH:bmu03430]; Homologous recombination [PATH:bmu03440] # 32 132 39 136 138 72 41.0 4e-12 MSPIAYGMRVLLRVLSISVDSHSRCGRRRRKKLTELDELLWRFDDLAFLPHVFADDCHAA ETPILLSTKLPQLTGDVLVLLDDALPADWQKEFGRFSRIIDVVSTEPTELKLSRDRWRAY KAAGVELAAYDRRK >gi|319803776|gb|ADMF01000038.1| GENE 45 50363 - 51685 122 440 aa, chain + ## HITS:1 COG:ECs1299 KEGG:ns NR:ns ## COG: ECs1299 COG0582 # Protein_GI_number: 15830553 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Escherichia coli O157:H7 # 25 440 22 397 400 130 27.0 4e-30 MPKNVRPLSVKEIAAITRVGTTAVGGVPGLSVQVLQTGDRYFVYRYQIDGRRSMVSLGSL SEISLKVARERAAAYAELVKRGISPVEHRRKEAERRKRESDESARERDRQLHTVAVCAEE WIQERVQANYWAANIRGESVMRAYFRNHINPKIGAVPIGELSPQQVFDLLRPLWQTTTDT AENCKSAVFNLFRWAKARGYCVQENPADIKGVLGVLLEPLQATRKKNRNLPALDYQEIPD FFVELMASDRVSYRMTAFAILTTLRSKMVRLAKWTDVNFQERTLTIPNANFKTKGRGDHT VFLSAAALQILNGMPRYPGIDLIFPSPRQKRELSDAAMGIVFARLHERSLQSGGKGWIDP VLSKKEGVLVIATQHGTSRASFKTWTKTGENRKLFDEEAVELCMAHKLQDDYGGAYNRAT LEPERRQVMEAWGQYCFSKL >gi|319803776|gb|ADMF01000038.1| GENE 46 51725 - 51931 110 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTQTEQQSLKTCEFLRPAEAAKYLRVSRTTIWRWARERPDFPKPIRLSATIAAFRRADID AFVARIEA >gi|319803776|gb|ADMF01000038.1| GENE 47 51967 - 52737 362 256 aa, chain - ## HITS:1 COG:lin0080_1 KEGG:ns NR:ns ## COG: lin0080_1 COG3617 # Protein_GI_number: 16799158 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Listeria innocua # 5 113 4 112 129 125 56.0 7e-29 MNELIQTFKFEGSNLRVIVENGEPWFCAIDVCKALGYSNTRDALRNHTKNKGVAKHDTPT KGGVQPLAYLNEGNLYRLIMRSKLESAERFQDWVCGEVLPTIRKTGSYGTRQTPALPDFT NPAIAARAWAEQYEQRLALEAQVKSDMPKVEFAEAVTASDAEHTITEAAKVLSIRPRKFF DWLRMGGFIYKQGTQAMQISINKGLMVTRFHTFKHTDGELDKKAHARITGKGLYFFYQRL RHEGLIERNPNLELTA >gi|319803776|gb|ADMF01000038.1| GENE 48 52803 - 53654 682 283 aa, chain - ## HITS:1 COG:PM1774 KEGG:ns NR:ns ## COG: PM1774 COG3646 # Protein_GI_number: 15603639 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Pasteurella multocida # 2 140 18 145 239 67 33.0 3e-11 MQAVATHSAAPAVTIYNGIPTVLSTNIADVFGKRHDHVLRDIESILKTTPEERLNNFIKI NIEKPANLGNGVVKYRAYALTKEGFTFLAMGFTGTKAAQFKWAYIDEFKRMEEALRAPTD QSALITTTEQYEIRKAIKSRAKNSSVHYQTVYNALYDYFKIASYKDLRHDQMKAALALIE TCTLKPQLPAPKIPEGSIVIDEVMAERIVVFIYYWRYLFRDDLNLFLALLRRVKSPLAAH FWEAVNDLGLGFMEEALAKQGYSVKDLDCYKSWASHQPKRLTA >gi|319803776|gb|ADMF01000038.1| GENE 49 54021 - 54341 296 106 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSFPKFKESLKPQIDSKSEVTPDTDLLLIQVAHQKDEENNRHKIKIYTLRLFAGLGGAMI IVYIYHLLMPSWARWLSPSEVAAIKDLALSIMTGVSVSLAIKFTTK >gi|319803776|gb|ADMF01000038.1| GENE 50 54338 - 54811 131 157 aa, chain - ## HITS:1 COG:no KEGG:AZL_011870 NR:ns ## KEGG: AZL_011870 # Name: not_defined # Def: hypothetical protein # Organism: Azospirillum_B510 # Pathway: not_defined # 5 128 2 137 172 64 30.0 1e-09 MTNENTTFRPLDSLQVMAYIVDMCRKQHIEVNVTKLQKLLYCCYGVALAQLGIRLTKESP QAWQYGPVFPKTLEYFRKHPIESLTDSSVLESTASDELKKLLIGTLTYFGQFSASQLSTW SHQIGSPWYRSSNGGANLREEIDDTSIKCYFRNEVLA >gi|319803776|gb|ADMF01000038.1| GENE 51 54951 - 56027 879 358 aa, chain - ## HITS:1 COG:no KEGG:Slit_1947 NR:ns ## KEGG: Slit_1947 # Name: not_defined # Def: hypothetical protein # Organism: S.lithotrophicus # Pathway: not_defined # 1 279 1 275 330 309 60.0 1e-82 MTNTQLVSNPFAAPSGAVSTPVADQATAASDQARAVAEVQAALMIARMNPRDPVKAMDRI LNACTRPTLANSATYSYSRGGTDITGPTIRLAEAIAQGWGNIQYGIREISQGKNVSTVES YAWDVETNTRRQVVFQVAHKRDTKKGTKILTDSRDIYELIANQGARCLRACILGVIPGDV VEAALDQCTVTQKAHVDMTPEGIQKLVEGFARFGVSKAQLEKRIQRRLDAIQPAQVISLR NIWKSLRDGMSVPGDWFEPEAAAAALPAKKGSAALKDKLKQKEAKTAPAPVEEAAPEVVA EEPLPGKAEAPEAAPTIDPADQPDAGAPATGMPPAPPAEEDPWLTEMKAAEAAQAAGD >gi|319803776|gb|ADMF01000038.1| GENE 52 56033 - 56968 791 311 aa, chain - ## HITS:1 COG:BH3544 KEGG:ns NR:ns ## COG: BH3544 COG5377 # Protein_GI_number: 15616106 # Func_class: L Replication, recombination and repair # Function: Phage-related protein, predicted endonuclease # Organism: Bacillus halodurans # 12 302 14 310 320 147 32.0 3e-35 MTTAIATPLPATRAEWLAQRRTGIGGSDVASILGLSPWRTPYQVWEDKTGRGEDQDDTPA LYWGRLLEDPIRQAYADSTGLTVTKPDCMYSSVTHPFMHANLDGIASDGRLVEFKTTSRA DGWGEEGSDEIPEYYQTQVQHYMAVMGAEQTDIGVLIAGRDFRIYTVPADKELQEMLINQ EERFWALVKADTPPEVSTSEDASRRWRTATAKKTVAADAQMLEAWQHLCSIRSQIDNLRS EEDSLKTLLMSGMRDAVSLKSNGKTIASWSLPSTRTTVDSKKLKQDFPAVWEQVAKTYAS QRTFRIYAPKE >gi|319803776|gb|ADMF01000038.1| GENE 53 57142 - 57264 73 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGYEAYQCFSTFFRHINEKASDLQPSVVIARYRVPTKIL >gi|319803776|gb|ADMF01000038.1| GENE 54 57607 - 57849 228 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTWNYPDGFDPSCLDRKLDLEADSDELAKQILENEGQTAVCTLFDAVEYLYDFFNNSPIP PAFLEEFAQKTNHKINNLRS >gi|319803776|gb|ADMF01000038.1| GENE 55 58001 - 58294 212 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNVKSISAALNCLIRNVALTFVNDNQSLELATKAAVSRHGREAIVMYQWYSACVQEPSLD DFEVWLAKQVEKHPNFKKEVESWRQYFHRRSEEQEAA >gi|319803776|gb|ADMF01000038.1| GENE 56 58306 - 58467 62 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTLKKLLGHNERTGFSDTAIIFCAFLTGAGICALGISLCLLMRWAVLNGYVLF >gi|319803776|gb|ADMF01000038.1| GENE 57 58631 - 58936 225 101 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSELKSHQEIIDSIKNALIEIDHERDELQISNQPSPLNVASIHAAAAAVVLMYIDGRLSA SKVIDLLELAHVADLAAIELFLRDAAQAEEQEKLTPSETDW >gi|319803776|gb|ADMF01000038.1| GENE 58 59408 - 60067 269 219 aa, chain - ## HITS:1 COG:NMB1078 KEGG:ns NR:ns ## COG: NMB1078 COG2932 # Protein_GI_number: 15678006 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 115 209 43 138 146 67 37.0 2e-11 MNDIATRIAGLVNESGLSLRTLSKAIGVNHVSLSQWVTGKNRPSDKGLEALCLYFHVSPA WVLYGDDSAAGAQSIRLEDAISIPLLEAEGACGAREDLSQYGCGIITMVRVTYEFIRNYC PSASMNSLHIITAKGDSMMPTLNNGDAVIVDVSQRDVTQDGLYAVELGGSTLIKRIQITH KGLLLLSDNTKYKPFTIDDGDTLNVIGRVYVGLQIRRLL >gi|319803776|gb|ADMF01000038.1| GENE 59 60189 - 60452 67 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSNNIVRKSVEIYGERQGIKGRGAYTAFARACNVSRQTVWHWCRHNSVPLKYADFVSDI TGLSATSLNSEMRNALQKQLGITGTGR >gi|319803776|gb|ADMF01000038.1| GENE 60 60463 - 61695 666 410 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSVPARKWALSKRTGSSARRAVLNCLADWMIGENAVECWPSIDTIVFETEMNRKTVMKAT AELVALGLIGKRKVIDIERHCWQTRYTFIGYVPKEWVKAERPGEELSSHAKESPKNGTYQ KRYVPKTESTKNGTEVHTKNGTKVGPKNGTIESPKFGTRTGIEQGITGIRQEGKAHASRS LPVAPPPPGLDDEAEAEWNDLTARAALEADSMPEDVFSPDAQTPIENIDARFDTASDSIF GTDTPTENQNAAERKSEAISKPKRRKRVALTLTELPIDWRIYCEKTAPELNPDRVWDDFS DFWQNRAKDPFCVDWSRTWQTNIRKLHALPNNDFRKAPQLKAEIAQAAQAKPSRFMTAQE RYEAELDRLGQISDEEYYARIDRAGEEFVRRDKERAARLAQEKAKKEKKL >gi|319803776|gb|ADMF01000038.1| GENE 61 61692 - 62357 275 221 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTTTFTTLHDAAATLVPPMQVHEFNCPTHGKQVYNAYMRNGRFAAPHCPICRKVRAEERA ILVAVKDDAERTCRSLQNLFGESLGGDLSSRDMTFARFTTSGSPYVTKARDLCRRFADRF LIREIEKERLREAGNSDWRKKNALGICLQGDCGVGKSFLANCILNRLTEIGTPGYFVSCP SLMQAIFDLPFGDNLKTVESTLSQIRRRRARGTSGLWPSSP >gi|319803776|gb|ADMF01000038.1| GENE 62 62296 - 62766 311 156 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 149 418 564 570 112 38.0 3e-24 AQKDFGIFIILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEI CRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFD CVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:28:47 2011 Seq name: gi|319803734|gb|ADMF01000039.1| Sutterella wadsworthensis 3_1_45B cont1.39, whole genome shotgun sequence Length of sequence - 43795 bp Number of predicted genes - 42, with homology - 37 Number of transcription units - 27, operones - 8 average op.length - 2.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 238 - 295 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. 1 1 Tu 1 . - CDS 676 - 1278 519 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 2 2 Tu 1 . + CDS 1256 - 2581 1114 ## COG0303 Molybdopterin biosynthesis enzyme - Term 2523 - 2552 0.5 3 3 Tu 1 . - CDS 2616 - 3551 770 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 3562 - 3600 2.4 4 4 Op 1 . - CDS 3668 - 4810 403 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 5 4 Op 2 . - CDS 4788 - 5888 853 ## COG2378 Predicted transcriptional regulator 6 5 Op 1 10/0.083 - CDS 6221 - 6880 522 ## COG2834 Outer membrane lipoprotein-sorting protein 7 5 Op 2 . - CDS 6893 - 9478 2393 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 9503 - 9562 3.5 + Prom 9447 - 9506 3.4 8 6 Op 1 1/0.250 + CDS 9723 - 10682 689 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 9 6 Op 2 1/0.250 + CDS 10763 - 11425 563 ## COG2840 Uncharacterized protein conserved in bacteria 10 6 Op 3 . + CDS 11465 - 12436 660 ## COG2860 Predicted membrane protein + Term 12611 - 12659 10.5 - Term 12594 - 12652 2.3 11 7 Tu 1 . - CDS 12736 - 13920 1341 ## COG3203 Outer membrane protein (porin) - Prom 14089 - 14148 4.5 - Term 14373 - 14403 4.3 12 8 Op 1 . - CDS 14423 - 14761 615 ## COG0347 Nitrogen regulatory protein PII - Term 14872 - 14910 0.0 13 8 Op 2 . - CDS 14940 - 15305 497 ## - Prom 15345 - 15404 4.4 14 9 Op 1 9/0.083 - CDS 15438 - 16796 1286 ## COG1109 Phosphomannomutase 15 9 Op 2 7/0.083 - CDS 16833 - 17702 772 ## COG0294 Dihydropteroate synthase and related enzymes - Term 17723 - 17759 1.1 16 9 Op 3 . - CDS 17801 - 19816 1608 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Prom 20005 - 20064 3.7 + Prom 19643 - 19702 1.7 17 10 Tu 1 . + CDS 19791 - 20012 79 ## 18 11 Tu 1 . - CDS 20091 - 20744 632 ## COG0293 23S rRNA methylase - Prom 20859 - 20918 1.7 19 12 Tu 1 . + CDS 20871 - 21344 259 ## PROTEIN SUPPORTED gi|56478165|ref|YP_159754.1| RNA-binding protein + Term 21415 - 21456 11.0 - Term 21401 - 21444 11.4 20 13 Tu 1 . - CDS 21482 - 21958 761 ## COG0782 Transcription elongation factor + Prom 22203 - 22262 7.5 21 14 Tu 1 . + CDS 22305 - 22937 727 ## COG2910 Putative NADH-flavin reductase + Term 22945 - 22991 4.3 22 15 Op 1 . - CDS 23012 - 23608 707 ## COG0279 Phosphoheptose isomerase 23 15 Op 2 . - CDS 23634 - 24260 574 ## COG0353 Recombinational DNA repair protein (RecF pathway) 24 15 Op 3 . - CDS 24272 - 25108 839 ## COG0157 Nicotinate-nucleotide pyrophosphorylase 25 15 Op 4 . - CDS 25053 - 25208 80 ## 26 15 Op 5 . - CDS 25233 - 25577 195 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 27 15 Op 6 . - CDS 25616 - 26038 322 ## 28 15 Op 7 . - CDS 26052 - 27419 1206 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 27621 - 27680 2.5 29 16 Tu 1 . + CDS 28007 - 28327 521 ## COG0526 Thiol-disulfide isomerase and thioredoxins 30 17 Tu 1 . + CDS 28709 - 29917 1585 ## COG1158 Transcription termination factor + Term 29941 - 29979 2.1 - Term 29924 - 29971 12.8 31 18 Op 1 23/0.000 - CDS 29986 - 30774 791 ## COG1587 Uroporphyrinogen-III synthase 32 18 Op 2 . - CDS 30771 - 31700 1098 ## COG0181 Porphobilinogen deaminase - Prom 31813 - 31872 2.0 + Prom 31973 - 32032 3.1 33 19 Tu 1 . + CDS 32147 - 32434 288 ## PROTEIN SUPPORTED gi|33592360|ref|NP_880004.1| 50S ribosomal protein L31 type B + Term 32546 - 32603 1.9 + Prom 32547 - 32606 1.9 34 20 Op 1 2/0.250 + CDS 32678 - 34393 1721 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 35 20 Op 2 . + CDS 34481 - 35908 1511 ## COG0534 Na+-driven multidrug efflux pump + Term 35948 - 35987 10.0 36 21 Tu 1 . + CDS 36178 - 36945 713 ## COG0731 Fe-S oxidoreductases 37 22 Tu 1 . + CDS 37803 - 38915 797 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Term 39171 - 39219 6.4 38 23 Tu 1 . - CDS 39270 - 40172 1131 ## COG0501 Zn-dependent protease with chaperone function + Prom 40096 - 40155 1.6 39 24 Tu 1 . + CDS 40217 - 40399 70 ## + Term 40518 - 40555 -0.9 40 25 Tu 1 . - CDS 40416 - 41573 997 ## COG2956 Predicted N-acetylglucosaminyl transferase - Prom 41605 - 41664 3.3 - Term 41690 - 41733 7.6 41 26 Tu 1 . - CDS 41827 - 42954 1480 ## COG3203 Outer membrane protein (porin) - Prom 43098 - 43157 3.8 42 27 Tu 1 . - CDS 43349 - 43795 378 ## Ppha_0277 transposase IS4 family protein Predicted protein(s) >gi|319803734|gb|ADMF01000039.1| GENE 1 676 - 1278 519 200 aa, chain - ## HITS:1 COG:YPO0013 KEGG:ns NR:ns ## COG: YPO0013 COG0746 # Protein_GI_number: 16120366 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Yersinia pestis # 2 192 16 199 213 132 38.0 4e-31 MAVIARDNVTGLIYAGGRATRMGGVDKGLELFRGRPLIEAVIDRLKPQCASIVISANRNL ERYAAWGYPVVRDLDDAFAGPLAALAAAGAQSVVMTEWVLTAPCDAPFFPEDLMERFRRA QERSLQEGRDPDAFIAKGERPQNAFACLRSKCLLSAGSFLALGRRRLGWWYSELHAETVQ MPDESAFANLNTLDELKAAE >gi|319803734|gb|ADMF01000039.1| GENE 2 1256 - 2581 1114 441 aa, chain + ## HITS:1 COG:STM0846 KEGG:ns NR:ns ## COG: STM0846 COG0303 # Protein_GI_number: 16764208 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Salmonella typhimurium LT2 # 46 437 23 402 413 254 40.0 2e-67 MSLAITAIPDSLLWAILSDIKIRYGTLLMTDFISVEKVYGILDAAITPISRKERLPLRDA LGCVLAESLYATNDVPAFNNSAMDGFAFPGSSLPAHGLARLPVEGVSYAGVPYCGEYSPR TALRVMTGAAVPEGADTVIPFEHVRETTDDAGQTWIEFPHDEVKPGANLRLKGEEMKAGS IVMPAGLVLTPEWIGMAASLGHAELLVRRIRVAVFSTGDELAAPGTPGPLDTGRIYNANS PLIATLAQSWGAQVEDLGILPDNPEAIRSAFLDLGSRVDFIVTSGGVGEGEHDYTSKVFA ELGGELSHHHISQRPGKPFSFGRLGEAGPWFIALPGNPVAAAVSAKLYLHRAVRLAAGAL SDEIGGKVVPARALSRVKGRTGRTDIVRGHLEPQGEVLVFTPAGSQGSAMLSTLAGMNAA AVLPEDTASAEAGSFVECLLL >gi|319803734|gb|ADMF01000039.1| GENE 3 2616 - 3551 770 311 aa, chain - ## HITS:1 COG:PA1411 KEGG:ns NR:ns ## COG: PA1411 COG0697 # Protein_GI_number: 15596608 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 6 307 2 299 303 191 43.0 2e-48 MPDSSRRPIDGYALITCLVLCIIWGLQQVAIKAAGSDVSPMLQVSVRSGVAALLLLITAK FVLHEKWNPKLRWRDGFLLALGFAGEFFFVAEGLRFTSAAHMSVLLYTAPLFAAVGLAIK LPEERLTVIQWGGVLLAFLGIGAAFLLPALMSHSPAAEGSELWWWGDILGLCSGISWGFT IIVMRVTTVSEAAPTQMLFWQLAGGFVLLFPCALLTGQNHFEGTAIGWTSLLFQIFIVSF ASYLVWCRLIKIYLAARLGILVFMTPIFGVILSVLLLGESVGLPFVAGSLMVFCGIMVVQ RPHFFQRRRSS >gi|319803734|gb|ADMF01000039.1| GENE 4 3668 - 4810 403 380 aa, chain - ## HITS:1 COG:PM1388 KEGG:ns NR:ns ## COG: PM1388 COG0639 # Protein_GI_number: 15603253 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Pasteurella multocida # 29 247 2 220 226 212 44.0 8e-55 MTTEIEVKKKRRRTRRRRRPTAAKELPQIFFCGDPHGCFDQINQAAREYQPDALVILGDM QAPAPLEVVLEEALQYAPVWWIPGNHDSESDEMYDNLWRSKLADKNLHGRAANVCGVRIA GLGGVFRGQVWMPDDPPNYYCPATFIRRVGPGNVWRGGVPRRHRTTIFPSVYQNLMRQHA DILVTHEAPSCHRKGFAAIDRLAEALGVKRLFHGHQHEDRAYGRHHGIIMTGVGYRGVTS ITGEVVIPAQLDPREAAALKSALEWADSHGIDAPPVRTPPPAMVVRTPLPHAAPTFQPPE LHPSSDMKPAPSSIKEAEAEQEKRTSRMTRARNRALAEAEKREPRRDAMLGRAVSARAPG GRWKRMQPKKKTGAGSDGGA >gi|319803734|gb|ADMF01000039.1| GENE 5 4788 - 5888 853 366 aa, chain - ## HITS:1 COG:XF1630 KEGG:ns NR:ns ## COG: XF1630 COG2378 # Protein_GI_number: 15838231 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 25 342 38 322 349 132 28.0 9e-31 MKSSTRRLIIDRLLAERGVVPFELFEEVLRVSAPTIKRDLRYMREELGAPIQFSKARGGY CYAESPDADEHKTVPALRAKRASQSRTFDPFRRTKDRTVKLRSKQWYSSDELFVLTSTYD LLGQLEADGSSALAKELSPLRARVMDLFNLGGTSPRMLMRHVRVIDRSVIFREPEAFELV GCALCEKRRLRISYHSQRTGETKEREISPLRLVHYRNRWYVDAYCHLTEALKTFLIENIS NAEILTTAVRRIPLSTIEAELDSGYGIFHGRKIQSAELHFTQEAGSYVLREAWHPKQRVE KLDDGTLMLTVPYSDSTEIVGEILRWGSKVEVVGPQELREEVRDEAARIAAQYTGDQKGD DNGNRG >gi|319803734|gb|ADMF01000039.1| GENE 6 6221 - 6880 522 219 aa, chain - ## HITS:1 COG:RSc2340 KEGG:ns NR:ns ## COG: RSc2340 COG2834 # Protein_GI_number: 17547059 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Ralstonia solanacearum # 13 217 9 214 215 137 40.0 1e-32 MSADFPRRRFFVLMGAALCACAFSPLGVSAEAVKTVSVDGSAQLEAFLSHVSAAEGAFRQ RVVDRSGKLVNEAEGIFAFRRPGAFLWNYEKPWKQQVVSDGQTLWLYDEDLMQVTVKKVS DALGATPAAVLFGSGTLPKDWQTSSEAGAVTLTPKEPQAGFESVKVFFDASGNPDSMSLR DTFGQTTEVKFLRFKALEQMNPDRFRFVIPKGVDVLQDA >gi|319803734|gb|ADMF01000039.1| GENE 7 6893 - 9478 2393 861 aa, chain - ## HITS:1 COG:RSc2341 KEGG:ns NR:ns ## COG: RSc2341 COG1674 # Protein_GI_number: 17547060 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Ralstonia solanacearum # 94 859 21 773 781 564 45.0 1e-160 MARTRTKIEDDVDEDRIKPSRASKAGRASKARRNANADAEGEVLSRSGVSSAGADADQAA RREEAAARRAARRERRAALMRALSERLSEAFVGLARFLWQYAWVFAMPLAVALAAALASY SPADPSFSVSTARAPVNLCGLWGAWAADLLFSMLGFSAWWLVLGLAMMAVFALRARWRIQ RGETAPDRVNPPKFTAFIGLCALLMGSTSLEALRFGGVDFGLPAGTGGILGNSLARAVIY YVGAGVSAVVFLVLMAIGIALLLDFSWADIAEGIGRFIDEKIVARFRKDAPRTVGYSDAG EEVPAADSSTDSAADISALYEPTALRQEFEIVKPDLKSAGSQSLFVDQMITPAPQGFTSP ARPSVEEAHPSLSLLDTPDPNGRKTDEESIQLTSRLIVAKLKSYNIDAEVLGAQPGPVIT QYRLEPGPGVKGAQIESVRDDLRRALGVQAVRIVLSIPGTSCIGIEVPNPVRETVRLKEI LKSEAYEKSTSALTLALGKDIAGHPVVIDLAKTPHLLVAGTTGSGKSVGINAMILSMLFR NSPKRLRLVLIDPKMLEFSLYNDIPHLLTPVVTDMNKASAALKWLTNEMDRRYAVMSRVG VRQFSGFNEKVLEAEARGTPIRDPMVAKDDPAAPNLEPWPYIVCVVDELADLMLTNRKEV EGEITRLTQKARAAGIHLILATQRPSVDVVTSLIKANVPSRIAFQVASATDSRVILGESG AEQLLGNGDMLFHRPGAPDARRIQGCFVDDGEVQRVAEALRRQGSPSYVSGVTEGAETAD EDGESSVGGRGRKSGEKDPLYDEAVQVVLTEKRASISLVQRHLAIGYNRAANILEAMEAA GLVSKPNAMGKRTTLVPDREL >gi|319803734|gb|ADMF01000039.1| GENE 8 9723 - 10682 689 319 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 10 317 5 306 306 270 46 1e-71 MTQTNHAKVIILGSGPAGWTAAVYAARANLKPVVITGMEAGGQLMTTTEVDNWPGAAEGI QGPDLMEQMQKQAERFGTQVVYDLVKDVDFSSRPFKLTTDLGDVWTCDALIAATGASAMY LGLPSEAAYKGKGVSACATCDGFFYRGKPVAVVGGGNAAVEEALYLANIASKVTLIHRRD TFRAEPILIDQLMDEVKAGRIELALRREVDEILGDGKSVTGVRLKSTAGEAPVEVPLEGV FIAIGHKPNTTIFEGKLELSKGYIVTRGTGHATASATSVEGVFAAGDVQDQVYRQAVTSA AAGCMAALDAQRYLEALSR >gi|319803734|gb|ADMF01000039.1| GENE 9 10763 - 11425 563 220 aa, chain + ## HITS:1 COG:RSc2343 KEGG:ns NR:ns ## COG: RSc2343 COG2840 # Protein_GI_number: 17547062 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 6 214 12 217 221 141 44.0 9e-34 MAQYHDLSDLKKLSHDLKVQAKAAQEAKRVQAAKANRLGAEAAAFREAMASLGVKNEDHT RGRRITTPAKPAPVPHQSKLEKEAVLEESLSDQCDPVVFLESDDGLMFRRPDVPPDIPRK LYRGEWTVQDHIDLHGLFVDEARDTVAAFIRTAMIRGHRCLRIVHGKGYNSEGGQSVLKE MVRRWLQQKSEVMAFVQAPPHDGDSGAVIVLLEQRRPRRS >gi|319803734|gb|ADMF01000039.1| GENE 10 11465 - 12436 660 323 aa, chain + ## HITS:1 COG:RSc2344 KEGG:ns NR:ns ## COG: RSc2344 COG2860 # Protein_GI_number: 17547063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 15 205 12 202 207 157 39.0 2e-38 MMTPVINALTPSTEWVDTIAMLGFSFAGILAARGRGVDPVGVFILAFTSAFGGVTVRDML LDIRPFYWVSHEAFTWLIICFTIFAPVIAARLSDRIARELFLWADAVGLGFFSASATVLA WESGIPPLSCTLVGVITGIVGGIFRDVLLNRLPAALSDRKPYGLAAFIGCWFGIVLLSDG VAAATVILVTAASIVLIRMFTLKVNWEIRYRSPLSRRIFPGNGPISLTRILRRSNAAPKP PRLLKTPKSSKSSKSEPAASAPQMPRIYKHANPANLPSAAPWRPIDAPLEDKTKPSKEGK PSAKSPSQNLNTPAEPDSPKHED >gi|319803734|gb|ADMF01000039.1| GENE 11 12736 - 13920 1341 394 aa, chain - ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 366 1 338 389 95 29.0 2e-19 MKKSLTALAVLGVFAGSAMAADVTLYGALDTGFEYFHKKTTKFDGSSEKSDTFDMQTGWD TGNRWGLKGSEDLGNGYKVSFKLESGFNGDDGTMGQGSRLFGREAGLTLSGPFGSVAFGR FGGLSSSCGTYDMLGYVESFDGGDGDVWGFAASDRYDNMVVYQTPRFAGLQLTAQYSFKT DSKASAKVNSDGDPEFSGDEGTSHAQRYASIGVSGEYGPAAFAVGYELTKYGANENNGDT PAVAYGRELDKDGQLVFIGGNYDFEVVQLFAEAQYFKHQTSVAGIDAELSNNTYKALGLK GYGLHLGAAAPLGAGTLTAGLYFVDFSEEYAGNEADSDYKYYGVSARYNYPLSTRTGVYV GAGYGQTKGDAAEGDVSDYKAQVTQVYCGLVHTF >gi|319803734|gb|ADMF01000039.1| GENE 12 14423 - 14761 615 112 aa, chain - ## HITS:1 COG:AGc3252 KEGG:ns NR:ns ## COG: AGc3252 COG0347 # Protein_GI_number: 15889072 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 112 46 157 157 160 73.0 8e-40 MKQIVAVIKPFKLDDVREALSETGVHGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKLK VETVVADDLVEQAIDAIRKAAHTGKIGDGKIFVYDVEQVIRIRTGETGESAV >gi|319803734|gb|ADMF01000039.1| GENE 13 14940 - 15305 497 121 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAENQEPVKVEEQGPFIHQLQLFLVGGQQFTVNELSDSVKMPQNVIAFINAWRQKRDVWH SPNNDPKFGVRVKDVSLYEYRVGKASAVKPAESVAAPAPAAAPAVEAEPAKSSVKRTTKV A >gi|319803734|gb|ADMF01000039.1| GENE 14 15438 - 16796 1286 452 aa, chain - ## HITS:1 COG:RSc1528 KEGG:ns NR:ns ## COG: RSc1528 COG1109 # Protein_GI_number: 17546247 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Ralstonia solanacearum # 1 443 1 447 447 517 60.0 1e-146 MKRRYFGTDGVRGKVGSAPITPDFVMKLGQAAGRVLKRHNPTGRASVLIGKDTRVSGYML EAALQAGFSSAGVDVVLCGPIPTPAVAYLTRAQRLDAGVVISASHNPYDDNGIKFFSAAG QKLPDSWEVEIEEEIDEGFACVPSAELGKARRLDDASGRYIEFCKSTIDSDIDLKGLKIF VDCANGAAYHVAPDVFHELGADVVAVGNTPDGFNINRGVGATHTEHLSEQCRAAGCQVAV SLDGDADRLIMADADGRVYTGDELLYVMIRDRLSKGMVAGVAGTLMTNYGLEKRLNELGI PFGRAKVGDRYVLEMLLERGWILGGETSGHLLALDRQTTGDGIVSALQVLSAMRHTGKSL AELTADLQLMPQVLINRPFTRGADWHSLPQFAATVTEAEQAVAGRGRVLIRPSGTEPVLR IMVEADDKAFAEQLAEKMAQALENNLLSKTSK >gi|319803734|gb|ADMF01000039.1| GENE 15 16833 - 17702 772 289 aa, chain - ## HITS:1 COG:ECs4056 KEGG:ns NR:ns ## COG: ECs4056 COG0294 # Protein_GI_number: 15833310 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Escherichia coli O157:H7 # 24 283 25 290 297 223 47.0 3e-58 MFTNLQYGGTMPFAKTWRCADRVFDLSARPLIMGILNVTPDSFSDGGDHNKLDDAVAWAR RMVAHGADIIDVGGESTRPGSSPVSLEEESRRVLPVVEALAAEGFVVSVDTSRPEIMTAA AKAGAKILNDVRGFDLTGAAEAAAATDCGLVVMHGFDAPRGSDIVAAVYDYLAKRTTALR ELGVSSDRICWDPGFGFGKTVEGNFELIAATLRFASSGQPLMAAVSRKSALGAVIGREVP KDRTAASAACAVIACGLGAQIVRVHDVAETRDELLVLAAIEKAAARLVH >gi|319803734|gb|ADMF01000039.1| GENE 16 17801 - 19816 1608 671 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 3 599 2 597 636 624 53 1e-178 MDNKSFARIAVWILVAVVLFTVFRQFETNSAQPLDQTSYTQFMDDAKAGKIRKVEVQGRK ILVTPQSGAEYAITSPGDLWMVDDLRKNGVQVYGKAEEEPSFLTTLFVSWFPMLLLIGVW IFFMRRMQGGAGGGGAFSFGKSKARMLTEQDNKVRFKDVAGCDEAKEDVQEIVDFLRDPS KYQRLGGRIPRGVLLVGSPGTGKTLLAKAIAGEAGVPFFTISGSDFVEMFVGVGAARVRD MFETAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQMLVEMDGFDTGANVIVIA ATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQILAVHMKKIPAGPDVDSAILARGTPG FSGADLANLVNEAALFAARRNGRVVTMADFENAKDKIMMGAERRAMVMSEDEKKNTAYHE SGHALVARLLPESDPVHKVTIIPRGRALGLTMQLPEMDRYAYNRQYLLTRIAILFGGRIA EEVFMHQMTTGASNDFERATQLARDMVTRYGMSERMGPMVYAENEGEVFLGRSVTKTTHV SERTMQAVDEEVRRIIDEQYALARKLIEENQDKMHAMAHALLEWETIDKEQIDDIMEGRP PRAPRSTEAQENMKPRASQPAAKPTVKAEEPPAAADAAPTDKLVDTGSDEPDVGSKTNGN QSAPKDGSKPE >gi|319803734|gb|ADMF01000039.1| GENE 17 19791 - 20012 79 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRAKDLLSNFELQYPFRSAKALHFLTLKRSGEERRCTTGLLDAERTDALASRVEPAAVCF TFKKRQISGPQIL >gi|319803734|gb|ADMF01000039.1| GENE 18 20091 - 20744 632 217 aa, chain - ## HITS:1 COG:RSc1525 KEGG:ns NR:ns ## COG: RSc1525 COG0293 # Protein_GI_number: 17546244 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Ralstonia solanacearum # 7 216 3 220 221 238 55.0 4e-63 MPVATKKLRSNRAWIERHINDPFVKRSRAEGYRARSVYKLIELDEKEHLLKPGSTVVDLG SAPGSWTQVVRERLAGPDGSVRGRIIAMDILPMDPIDDVYFLQGDFREQEVADKLAEILN GDKVDVVLSDMAPNLSGIAAADAARSLLLNELALEFCLEHLAPNGVFVTKAFQGSGYSQY VESLKRVFKKVAAKKPEASRDTSAEVYLVSRGLKAPK >gi|319803734|gb|ADMF01000039.1| GENE 19 20871 - 21344 259 157 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|56478165|ref|YP_159754.1| RNA-binding protein [Aromatoleum aromaticum EbN1] # 1 153 1 156 156 104 39 1e-21 MSEITLSRDARLTLRAQAHHLNPVVLLGASGLTEAVMKEIDRELKAHELIKVRVPTDDRE EREAIFVKIADELGCARVQMIGKLLVLWRPADEEEPTAEEWIARAAAAAKGLDKEAAAPA KKVAVKRPGDKKKKVEAQPRRRARPKTKRVTKKSALG >gi|319803734|gb|ADMF01000039.1| GENE 20 21482 - 21958 761 158 aa, chain - ## HITS:1 COG:PM0715 KEGG:ns NR:ns ## COG: PM0715 COG0782 # Protein_GI_number: 15602580 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Pasteurella multocida # 1 158 1 158 158 165 57.0 3e-41 MNRIPITAAGAAKLKAELDYLKKTARPNVVAAIAEAREKGDLSENAEYDAAREEQGHIEG RIAELEGKIPALQVIDPKTVAAGDRIVFGATVTLYDEEEDSNVTYQIVGDDEADIKKNLI SVSSPIARALIGKSEGDTVVFMAPKGKVTFEVETVEYK >gi|319803734|gb|ADMF01000039.1| GENE 21 22305 - 22937 727 210 aa, chain + ## HITS:1 COG:SP1627 KEGG:ns NR:ns ## COG: SP1627 COG2910 # Protein_GI_number: 15901463 # Func_class: R General function prediction only # Function: Putative NADH-flavin reductase # Organism: Streptococcus pneumoniae TIGR4 # 2 207 1 206 209 229 51.0 2e-60 MIRIAVIGANGQAGRHIVAEALARGFEVTAFVRGSTAPAAQHVVHKDVLAIEQSDLAGFD AVVDALGFWTPDTLPLHVKTVLHLADLLSGTKTRLLIVGGAGSLYMDAAHTQQLVDQPFF PEQYRPLASAQRDQLEAIRKRSDVQWTFISPAAEFEVSQPRTGQYVLAGEEFTTNAEGKS VVSYADYAVAVVDLIANGSHIQERVSVRGS >gi|319803734|gb|ADMF01000039.1| GENE 22 23012 - 23608 707 198 aa, chain - ## HITS:1 COG:HI1181 KEGG:ns NR:ns ## COG: HI1181 COG0279 # Protein_GI_number: 16273103 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Haemophilus influenzae # 1 187 1 187 194 228 56.0 7e-60 MSTHHVRAALLEAQEALAHLLSDEVMLERINAAGNLMADALQSGGRIYSCGNGGSLCDAM HFAEEMTGRYRNNRPAYAATAIADASHMACVANDFGYEYVFSRYIEGVARSGDVLLGIST SGTSKNVLRAVEASRVKGVKVVSLTGRADSPIAKLSDVAIVTPGGRYADRVQELHIKCIH IFIELVERRLNPENYAGE >gi|319803734|gb|ADMF01000039.1| GENE 23 23634 - 24260 574 208 aa, chain - ## HITS:1 COG:RSc1194 KEGG:ns NR:ns ## COG: RSc1194 COG0353 # Protein_GI_number: 17545913 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Ralstonia solanacearum # 8 207 11 207 207 175 47.0 6e-44 MPQESSPAIAALVKALEALPGYGPRSAQRAAFFLLSPKRRGELQALRQALADAETKVHRC PRCRTWCEGAVCEICADPSRDASLLCVVETVQDQMALEKSLNWPGLYFILGGRLSPMDDM GPTEIGFPELLVRIEEGLAENGLREIVVATSYTPEGDATAYYLMGAVKKRWPQLRITRLA RGLPSGLEVEYTDLATIAAAIEDRRQIG >gi|319803734|gb|ADMF01000039.1| GENE 24 24272 - 25108 839 278 aa, chain - ## HITS:1 COG:PM1111 KEGG:ns NR:ns ## COG: PM1111 COG0157 # Protein_GI_number: 15602976 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinate-nucleotide pyrophosphorylase # Organism: Pasteurella multocida # 9 277 10 281 282 176 35.0 3e-44 MLTTRQWAESILLADCPYEDLTTVGLGIEETCGTVSASLKAPGIAVGIDLAREIFLAAGA SVEVFAKDGDSLAARVPFLCARGSAQALHAAYKTAQCVMEYAGGIAERTRAMVDAARSVN PQAVVAGTRKHYPGGKRIALAGLLAGGGTVHRLGLSDSILVFDQHRVFTDDFAGAFARLK AANPEKKTAVEASCEAEAREFIELGADIVQCERFAPEALARTADFAKRLGRGTLLSAAGG VNAENAAAYAAAGAVILVTSWPYWGRPRDVKMTFAREA >gi|319803734|gb|ADMF01000039.1| GENE 25 25053 - 25208 80 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSAVHAFGGWLRSGGVPHPAELFFMPHILEVRDAHDASMGRIDPFGRLPL >gi|319803734|gb|ADMF01000039.1| GENE 26 25233 - 25577 195 114 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 6 114 3 114 114 79 36 3e-14 MEVRMRGMGGMGGMGGLMAQAQKMQQKLAKVQEELKQTEFTGEAANGAVKVVITGGHECR SIKIDPKVVDPEDIEMLEDLVMLAFNNAQQTCRTESEAAMNKAVPLPAGMKLPF >gi|319803734|gb|ADMF01000039.1| GENE 27 25616 - 26038 322 140 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQPSIDGAPLSWREIIAGAGLAGPLKVLAAESQVIELTRDRVQLRLGVQSLVTEQNRRFL EERLSAYFGRPFRVLFEAGATEAGATVADADRRRRAKEHQEMVERFKNDPLVKEVLRLFG GTIDESSIRPLSEEEKRGAE >gi|319803734|gb|ADMF01000039.1| GENE 28 26052 - 27419 1206 455 aa, chain - ## HITS:1 COG:RSc1191 KEGG:ns NR:ns ## COG: RSc1191 COG2812 # Protein_GI_number: 17545910 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Ralstonia solanacearum # 21 412 2 393 728 464 64.0 1e-130 MTRFGAVRILQSPKRFRKMSSYQVLARKWRPHDFESIVGQDHVVTALTRALTEGRLHHAY LFTGTRGVGKTTISRIFAKALNCQGADGKGGVTAHPCGVCEACRAIDEGRFVDYIEMDAA SNRSVEDMTQLLERAMYAPTEGRFKVYMIDEVHMLSSTAFNAMLKTLEEPPEYVKFILAT TDPQKVPVTVLSRCLQFTLRNMTPAGIVEHLEFILGKEGIEYERPGLRLIAEGARGSMRD ALSLLDQAIAFSGGKVTDTAVRSMLGLSSANALSALLRALAAGDAAQMIRLADEMVVESV SFGEALRGLAAMLHKIALLQRVKEAVAADDPEYPELAELAALLSPEEVQLYYQIALTGRN DLALAPDEYAGFTMALLRMLAFKPAGLRNVPPQRTPEPVRAALSSAPQSAPTPRAPQAPS RPTQSLQAAPPPMMEEPPPFIPDNPGAGGGEPRAG >gi|319803734|gb|ADMF01000039.1| GENE 29 28007 - 28327 521 106 aa, chain + ## HITS:1 COG:YPO3868 KEGG:ns NR:ns ## COG: YPO3868 COG0526 # Protein_GI_number: 16124003 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 3 106 4 108 108 113 46.0 7e-26 MSEILHINDETFDQTVNSDTTVFVDFWAPWCGPCRMLAPRLEQAAETFDGRAVIAKYNCD EASDKAAQYGVRGIPTVIAFKKGEVIDQRTGACDQATLDAFIEKNL >gi|319803734|gb|ADMF01000039.1| GENE 30 28709 - 29917 1585 402 aa, chain + ## HITS:1 COG:RSc1187 KEGG:ns NR:ns ## COG: RSc1187 COG1158 # Protein_GI_number: 17545906 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Ralstonia solanacearum # 1 402 17 418 420 661 81.0 0 MAAALEVDNAQRMRKQELMYAILKKKAKLGETIYGDGTLEILPDGFGFLRSPETSYMAST DDVYISPSQIRRFNLHTGDSIEGEVRIPKDGERYFALVRVDTVNDLPPEALKHRMLFENL TPIFPNKQLVLERDMRGDENLTGRIIDMFAPIGKGQRSLIVAPPKSGKTVLLQHIAHSIS ANYPDAVLMVLLVNERPEEVTEMQRTIRGEVVAATFDEPAVRHVQVAEMVIEKAKRLAES KRDVVILLDSITRLARAYNQVIPSSGKVLTGGVDANALERPKRIFGAARNIEEGGSLTII GTALIDTGSRMDDVIYEEFKGTGNNEIHLERRMAEKRVFPAINLTRSGTRREELLLAPEV LQKTWVLRKFIYDMDEIEAMEFLLDKLKKTKNNAEFFELMKQ >gi|319803734|gb|ADMF01000039.1| GENE 31 29986 - 30774 791 262 aa, chain - ## HITS:1 COG:PM1813 KEGG:ns NR:ns ## COG: PM1813 COG1587 # Protein_GI_number: 15603678 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Pasteurella multocida # 12 252 3 238 248 62 25.0 1e-09 MNEPLRTTSRPVILMRPGEANNRLAELLEAQGIHAVRWPAFSIELPEETDHITERLSNLD DVEMVVLPSPASVAAAAHWVREWPEHITLATVGEGTARVIRAAWGPKVKLIYPEGDASHS GSEALWPLVQAHGAPSRVLFLRGQTGREWLPEQFRRIGSDVVVLSTYIRVPLELTVPQLH RLEKAILGPSPLIYLTSTDAVDVLMHAVRPVPNARMWITRGKALTIHPRVESRLREAGFQ SIELTSPDENEVIARIRESLAA >gi|319803734|gb|ADMF01000039.1| GENE 32 30771 - 31700 1098 309 aa, chain - ## HITS:1 COG:NMA0718 KEGG:ns NR:ns ## COG: NMA0718 COG0181 # Protein_GI_number: 15793695 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Neisseria meningitidis Z2491 # 6 308 5 307 311 324 60.0 1e-88 MPHFDRCVIATRESPLAMWQALHVQALLRDRYPGAEVELLGMTTRGDQILDRTLSKVGGK GLFVKELEAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDM PAGARVGTASLRRELMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGL GDRIRQIIPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALG GSCQVPLAAYAVVENGELWLRALVGNHKEGKAAFTQARGPLAEPEALAARVVEDLRRQGA EDYLKACLG >gi|319803734|gb|ADMF01000039.1| GENE 33 32147 - 32434 288 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|33592360|ref|NP_880004.1| 50S ribosomal protein L31 type B [Bordetella pertussis Tohama I] # 1 88 1 88 88 115 62 4e-25 MKPNIHPEYRPVAFVDLSINKTFIIPSAVQTRETVEIDGVTYPLFKLDTSSASHPFYTGA QTRIVEAGRVEKFRAKFAAKKQALNTAAEAAKTTK >gi|319803734|gb|ADMF01000039.1| GENE 34 32678 - 34393 1721 571 aa, chain + ## HITS:1 COG:RSc1181 KEGG:ns NR:ns ## COG: RSc1181 COG1807 # Protein_GI_number: 17545900 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Ralstonia solanacearum # 11 537 11 534 598 238 31.0 3e-62 MLTQRPTPAFMSQEAARRLPRFALALLLAVFILSSFWADGLWTLRDAAGFGVAQSMTNGG LEAWLLPQIQGTPEAEIGPLAGWAAALFMKLFSELLGEIGAYRLTSVFWFLFTSVAVWST AWRLARRAEAQPVAFAFGGQAAPVSFARTTASCAVLFFVASFGIATRQYEPIADTALVAA AAWALYGAAWALRRPFVGAFVSGLAAGGAALTTSFACGFWLFLSALAAQAVLRALGGSRL LRISFTVLGFAAPLIFWIGTACLTVPDAAEVWFPLWFSNQAQHLEPASAAAIFWLSRTAV WFLLPMWPIALWALYSWRRQLDRTQILLPSLFLAAIVFAGFFIRYDAAGNLLLISIAPTC VLAAFGLASLRRSRENLLDWFVLSVFTVALLTVWLYWLAALTGIAPKMAKSVYMLAPGLD VTLDWSILAPLTVTVIWFVFVIWRLTHRPIVVWRGPWLSAAGMTAVAVTLLGLWHEGIDV NRSYQGVARATAEAIESLAGTGTKIDGADLPGGIRAALHYYGGIDFARPGEKAPLKLVRV RSDYAPAKALTEAISRPHTDETFYLVAGTIR >gi|319803734|gb|ADMF01000039.1| GENE 35 34481 - 35908 1511 475 aa, chain + ## HITS:1 COG:RSc1180 KEGG:ns NR:ns ## COG: RSc1180 COG0534 # Protein_GI_number: 17545899 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Ralstonia solanacearum # 11 438 6 436 448 235 39.0 1e-61 MTTLLPPDISLKALLKLAGPIFVANVAIIGSGTIDTIMGGQLGKEHLAAIALGISATISV LMGLVGILQGLSPIAGHHFGARRPREIGIDVAQAFWLVIFLSMIGVPLLAATDFWTDLGG VTGEVKRMAADYLFWTAMALPGSMAARVFIAVNAAVSRPKITMWVSLGMLVLKVPLNAIF MYGLLGFPAMGGGGAGVSFFVLTYVSLFAYWIIWRKSAYFLPMHSNGFVRPQYQRLKELL KVGVPMGICTFFEVSSFTLMAIFVSRLGPAVISAHQIVANLTSLCYMVPLSAGIASSVLI AQSLGAGWPAVAEIAMKRTLRLTLSIAVLASLVLYLFRGAIIWLYTSEPPVHDLAASLLL FGCFYHVFGAMQSVSSFALRGYRVTFAPMLIYGVLLWGVGLGLGYFFAFGGEWAGGPYGA YGFWGATAAGLFLTGIALFVMAFWVARSFSKDEKHSSAEVAAAIEAARGKQVMPA >gi|319803734|gb|ADMF01000039.1| GENE 36 36178 - 36945 713 255 aa, chain + ## HITS:1 COG:Cj1244 KEGG:ns NR:ns ## COG: Cj1244 COG0731 # Protein_GI_number: 15792568 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductases # Organism: Campylobacter jejuni # 7 244 4 228 300 100 30.0 2e-21 MLFPSPIFGPVHSRRLGVSLGINLLPADGKICSFDCIYCECGLNGSHRPHLRCPSRALVV SSLEEKLVEMAADGVKPDNLTFAGNGEPTSHPEFPAIVDDVIALRNRFAPSAKISVLTNA SHILKPAIFEALLKVDNPLLKLDTVDPDYIRRVDRPNSRYDLPALIKQMQAFNGKCMIQT MFMKGDWQGVSVDNTGDEYVLPWLEVVKSIHPELVTIYTLDRETPSKSLLKATHEELDRI ADLIHAAGLKCTVSY >gi|319803734|gb|ADMF01000039.1| GENE 37 37803 - 38915 797 370 aa, chain + ## HITS:1 COG:BS_yccC KEGG:ns NR:ns ## COG: BS_yccC COG0252 # Protein_GI_number: 16077338 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Bacillus subtilis # 20 370 30 375 375 300 49.0 3e-81 MFRLGFAALAASALFLISGPALSAPTTVTTPPSAAAMKQLPRVAILATGGTIASRGSNAL SLTDYGVGSGHKPVGIEVLVNAVPEIKQFAEISGEQVFNVGSSKLSIDNWLTLARRVNTL LADEHTDGIVITHGTDTLEETAYFLNLVVKSEKPVVLVGSMRPATGLSADGPLNLVNAVA LAASKEAYGQGVMVVMNDQISSAFGVTKTNSTNVGTFKCPDTGYLGFMQNNKPYFFNAIQ KRHTTQSEFSIDGLKTLPRVDVHYTTLGEDGRIIDAMVKLGAKGIVNAGLGHANVPNEVM NSLIAAKKAGAAVVVDSRVGSGLITPIGKFTREGFVSAMLHNPQKARILLMLALTKTDDP KEIQRIFNEY >gi|319803734|gb|ADMF01000039.1| GENE 38 39270 - 40172 1131 300 aa, chain - ## HITS:1 COG:PA2830 KEGG:ns NR:ns ## COG: PA2830 COG0501 # Protein_GI_number: 15598026 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Pseudomonas aeruginosa # 4 293 3 287 291 244 47.0 1e-64 MFKRIGLLILANLAIFIMLSVILTVVQMVFGINFGTMAGSNLNLGTLFIFAMVVGFSGSI ISLLASKMMAKMTMGLTMIDVNNPRNRVEQYVVETVRKLANEAGLPMPEVAIYEGEPNAF ATGPSRSNSLVAVSTGLLSSMNAQEVEAVLAHEMSHVKNGDMVTMTLLQGVMNTFVFFIS RIIGWVVDRQILRNEDEGPGVGYYVTSLVLDICLGFLASMVVAYFSRWREYHADAGAADL MHDTTPMINALQRLGGMEPNELPGAVKGFGISGGIGSLFASHPSIEDRVQALREHRYTAN >gi|319803734|gb|ADMF01000039.1| GENE 39 40217 - 40399 70 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQLPLRLYSHGRNSAMPRECLKFSERVGYPLQTIRPVLGEFGVYFTVETREADCFISTYL >gi|319803734|gb|ADMF01000039.1| GENE 40 40416 - 41573 997 385 aa, chain - ## HITS:1 COG:RSc0912 KEGG:ns NR:ns ## COG: RSc0912 COG2956 # Protein_GI_number: 17545631 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosaminyl transferase # Organism: Ralstonia solanacearum # 1 381 1 413 425 217 34.0 3e-56 MEFDLWYLVFVPVLFFAGWWCRGFDQKQRGESEKVPEITTKGLALLLDGESDKAIDAFIE VVRVDPELTELERVLGNLLRSRGEFERAVRLHRHLYNRADLSDEERALALKELAQDFLAA GFFDRAEAAYRKLSSVPSEHLYALRQLLSIYVIEHEWAAATETARLLETQAGETHSLEIA HFYCERIDQALRAKRSEDARLLVEQLMKYADATPRAQMTIAKVAEAAGATTEAVRWWRRV IEKNPDYAPLVIGKLADAMNEQGDRAGALKLLLDTTERLSTADVMEATLSRIAAWQGIGA AETLAQSLLEKHPTLSAYNALLQIRLKGNPDDPMTKLVAGLMEKNGRKWSRFQCRKCGFL ASSFSWHCLGCGAWESFSPKRVADR >gi|319803734|gb|ADMF01000039.1| GENE 41 41827 - 42954 1480 375 aa, chain - ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 352 1 338 389 107 31.0 4e-23 MKKTLAALAVLGAFAGSAMAADVTLYGALDTGFEYIHTKNPGEKAVDTFDMQTGWDTGNR WGLKGSEDLGNGYKVSFKLESGFNGDDGTMGQGSRLFGREAGLTLSGPFGSIAFGRFGGI SSSAGTYDMLGYVESFDGGDGNVWGFAASDRYDNMVVYQTPRFAGLQLTAQYSFKTDSKG TNKDDAKDNHYYNGDEGTSDAQRYASIGLSGEYGPASFAVGYELTKYGASAAAGVGRELD KDGQLVFLGGNYDFEVVQLFVEGQYFKHQTAIAGFGDAFEDNIGDVKGYGLHLGAAAPLG AGTLTAGLYYTDATDEQIEDKDVDFKYYGASARYNYPLSERTGVYAGAGYGQVKNDDSGD KTKVTQVYCGLVHTF >gi|319803734|gb|ADMF01000039.1| GENE 42 43349 - 43795 378 148 aa, chain - ## HITS:1 COG:no KEGG:Ppha_0277 NR:ns ## KEGG: Ppha_0277 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 147 423 568 570 159 53.0 2e-38 GYFVLVSNEIKDPFDALKAYRSREKIEELFATYKDSFDGRKPRTWYPENLYGRQFAQFVG LGYHCFLAKRILDVKKALSEKETEGKTKEELSLEAKLLAWLNQHSLIQILDWFRCVDYVA ATGNASASKWTTETTRRDQLFLKMLGVK Prediction of potential genes in microbial genomes Time: Sun May 29 20:29:30 2011 Seq name: gi|319803701|gb|ADMF01000040.1| Sutterella wadsworthensis 3_1_45B cont1.40, whole genome shotgun sequence Length of sequence - 42238 bp Number of predicted genes - 29, with homology - 28 Number of transcription units - 15, operones - 7 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 444 332 ## Ppha_1041 transposase IS4 family protein 2 2 Op 1 5/0.000 + CDS 1023 - 2255 1286 ## COG0477 Permeases of the major facilitator superfamily 3 2 Op 2 . + CDS 2337 - 3227 980 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 3288 - 3334 7.4 - Term 3276 - 3322 10.8 4 3 Tu 1 . - CDS 3415 - 4947 1441 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 5020 - 5079 1.9 + Prom 4918 - 4977 2.8 5 4 Op 1 8/0.000 + CDS 5133 - 6941 1212 ## COG0642 Signal transduction histidine kinase 6 4 Op 2 . + CDS 6938 - 7588 362 ## COG4566 Response regulator 7 4 Op 3 . + CDS 7585 - 9012 1017 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 9019 - 9066 -1.0 - Term 8972 - 9007 -0.3 8 5 Op 1 2/0.000 - CDS 9102 - 10766 1567 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Term 10842 - 10868 0.1 9 5 Op 2 12/0.000 - CDS 10880 - 11149 291 ## COG2440 Ferredoxin-like protein 10 5 Op 3 9/0.000 - CDS 11176 - 12471 1526 ## COG0644 Dehydrogenases (flavoproteins) 11 5 Op 4 29/0.000 - CDS 12639 - 13565 1397 ## COG2025 Electron transfer flavoprotein, alpha subunit 12 5 Op 5 . - CDS 13590 - 14351 872 ## COG2086 Electron transfer flavoprotein, beta subunit - Prom 14588 - 14647 2.6 + Prom 15518 - 15577 3.7 13 6 Op 1 4/0.000 + CDS 15714 - 16961 1666 ## COG0477 Permeases of the major facilitator superfamily 14 6 Op 2 8/0.000 + CDS 17098 - 17961 1459 ## COG0169 Shikimate 5-dehydrogenase 15 6 Op 3 3/0.000 + CDS 18113 - 18871 947 ## COG0710 3-dehydroquinate dehydratase + Term 18942 - 18981 3.5 16 6 Op 4 . + CDS 19060 - 20652 2301 ## COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase 17 6 Op 5 . + CDS 20689 - 21843 1589 ## COG1960 Acyl-CoA dehydrogenases + Term 21919 - 21960 10.0 18 7 Tu 1 . - CDS 22020 - 24890 1604 ## Dvul_2968 outer membrane autotransporter - Prom 25047 - 25106 4.3 - Term 25240 - 25284 11.2 19 8 Tu 1 . - CDS 25307 - 26281 1031 ## COG2768 Uncharacterized Fe-S center protein - Prom 26383 - 26442 3.1 + Prom 26342 - 26401 1.6 20 9 Op 1 . + CDS 26584 - 27933 1677 ## COG0591 Na+/proline symporter + Term 27943 - 28002 1.3 + Prom 27948 - 28007 1.5 21 9 Op 2 . + CDS 28100 - 29614 1742 ## COG0696 Phosphoglyceromutase + Term 29639 - 29686 7.2 - Term 29605 - 29641 0.6 22 10 Tu 1 . - CDS 29816 - 30868 662 ## COG0502 Biotin synthase and related enzymes 23 11 Tu 1 . - CDS 30988 - 31974 865 ## COG0583 Transcriptional regulator - Prom 32113 - 32172 2.6 + Prom 31663 - 31722 2.0 24 12 Tu 1 . + CDS 31856 - 32080 63 ## + Prom 32119 - 32178 2.9 25 13 Op 1 . + CDS 32266 - 33690 1663 ## COG0165 Argininosuccinate lyase 26 13 Op 2 . + CDS 33724 - 35094 1889 ## COG3069 C4-dicarboxylate transporter + Term 35155 - 35205 15.6 + Prom 35458 - 35517 4.8 27 14 Op 1 . + CDS 35647 - 36189 492 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 28 14 Op 2 . + CDS 36155 - 40024 2938 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) + Term 40068 - 40102 6.0 - Term 40049 - 40097 12.5 29 15 Tu 1 . - CDS 40140 - 41336 1580 ## COG3203 Outer membrane protein (porin) - Prom 41553 - 41612 4.5 - 5S_RRNA 41880 - 41951 94.0 # LTTRR5S [D:1..117] # 5S ribosomal RNA # Leptothrix discophora # Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix. Predicted protein(s) >gi|319803701|gb|ADMF01000040.1| GENE 1 1 - 444 332 147 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 140 427 564 570 104 37.0 1e-21 ILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYR FVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRN RVAQYRWSTETTARDQMFLELFFDESD >gi|319803701|gb|ADMF01000040.1| GENE 2 1023 - 2255 1286 410 aa, chain + ## HITS:1 COG:ECs2397 KEGG:ns NR:ns ## COG: ECs2397 COG0477 # Protein_GI_number: 15831651 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 1 402 1 388 404 367 53.0 1e-101 MSAKKYFGAFCLYLNYLVHGIGVLVMSLNVHEFEVQWQTDAAGVSVVISSLGLGRLALLV LAGSLSDKYGRRPFVLLGTVTYLAFFIGLLFTHDVGTAYFFGLLAGAANSLLDAGTYPRL MELFPKAPGPAVILVKAFVTAGQFSLPLILSFLVAHELWFGWSLLIAAAILALNFCVLFW MPIKVPDQPTRLGEPLAAELAQLNDPEAKLKLKRSSRIAMPELISYTLFGYTAMATFYIV SQWLAQYGESVAGMPYSEALKLLSIYTTGSLAGVFCSSLALRTFLSPQMMLLGCTTVSTL ALAVACFFPSPTVMFGFSFIFGFAAAGGVVQLGLAMMAAQFPRARGRATGIYYSAGSISN FTMPLITAWIVREWSIHEIFKFDVIISGCGILLAVFIAWRSRHAQAIDLN >gi|319803701|gb|ADMF01000040.1| GENE 3 2337 - 3227 980 296 aa, chain + ## HITS:1 COG:STM1355 KEGG:ns NR:ns ## COG: STM1355 COG2207 # Protein_GI_number: 16764706 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 1 285 1 285 296 306 52.0 3e-83 MYQHVFQTQGVMHFESGKTPRVMRYVVSDDPHWASGYHMHENETELIWVERGTVEVMVNA NKYVAHAGDIIALEHGKFHMLASSDADPAKTFTCAVYGFKFHDVRGESLILEPDSVPVVH AALGVDTIRTLFREFDTLVTQANPLVDILGNLIATLLTVLFRENFKLAARPGKDKQLKNA LIREVLVYLNENYREKITLEALSKRFRASVSYIAHEFAREYGVSPINYVIERRITEAKFA LTTTTQSLNQIAWHIGYENTYHFSKLFQRHVGCSPSEYRRRFGKSSGEHPDEASED >gi|319803701|gb|ADMF01000040.1| GENE 4 3415 - 4947 1441 510 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 19 508 20 474 484 176 30.0 9e-44 MQSTRRHLFKLAGGAALLSGLSAVQAAVPRSSIEKFDEQYDVVIVGSGFAGLTCALRCAE KNYSVLLIEKMTILGGNSLICGGNFACPGNPNQKKLGIKDSREIFIGDCTRDGLGINHVE LLDVIYDRCNDVVALLRKYGCTVDDSHLGISSGHTAARIIESTTSDGSCYVLPMLKALKG MKNVTIMNRTKMDSFVIDDTSRVAGIAARTKYSFNSKLASDDAENTSGEQKFFGAKRGVM LAAGGFSRDTWFRQMQDPRVQPTMDSTNQPGATAGALTAALDIGAAPIQISWLQFLPSCN PDEPGYGISANFIEHACYRYGIIVNPKTGKRFVNELAGRQPKTEAMFAVIGKDENYPVAI GDSAAAKAVNPAFLTAPLEKKTVKVFNSIDELADFYKIDRKALRDTIEQYNAAVKSGKDE AFGKPMNVTNGIDVSKPPFYAGRVCPKIHHTMGGVLISPKGEVIHMRTHKPIPGLYAGGE VTGGVHGASRLGTVGIIDALTFGMVAGETI >gi|319803701|gb|ADMF01000040.1| GENE 5 5133 - 6941 1212 602 aa, chain + ## HITS:1 COG:STM1386 KEGG:ns NR:ns ## COG: STM1386 COG0642 # Protein_GI_number: 16764736 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Salmonella typhimurium LT2 # 57 577 51 566 592 125 22.0 3e-28 MLSRFLTVSVFTAAFFLTNLPRPGYAEAEEKTIVIAMAETLEPGLRDHLFVATGAVIRQA LPGRNIAFETISAINAARDVKRLHPDFLILPSGLYLTLAQTNDLRLLATRKRSEAADPSR GVAAAFVVREDRTDLQSLADLEGVRIAAGTPYSVDGWLAALGEIQARGYDPEHFFSETIF LQFPFPDIVRSLMKGSADVGVIPACMLERLESVGALEKGLLRVVHEQTSPELACRRSSAL YPDWVVASMGTASPEDVRQVSIGLLTMPNTNDFEWWAAGDFRALNELYRTLRLGPYAFLR DFSVHAVIERYKGPLLFAAALMVLFLLNELRVHVLVRRRTKELSDALMERDANAQSIREL QKQLGEVERVGAVSQLSSMIAHELKQPVASIINFSAALSVRLGGLLKAHPECAAGLCTIR AESERISEIISRVRQYAKHRPASAAPCSLSAAVRKAVLVYRNGEGGRIPVEVTETENVWV VADELELELLVLNLIRNAAQAQTRAETPYIRIRIERSASEVQLTVEDNGPALSDAEFLKL SHAQTSMKPDGLGLGLEITRSIAARSDAMLVFERKPERGLLAIVRFPLKLSLNGTAFEER ES >gi|319803701|gb|ADMF01000040.1| GENE 6 6938 - 7588 362 216 aa, chain + ## HITS:1 COG:mll0990 KEGG:ns NR:ns ## COG: mll0990 COG4566 # Protein_GI_number: 13471106 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 2 198 1 197 212 120 39.0 2e-27 MMQTAEIETARPVIRIVDDDEVFLASQKFFFETFFPEVRVWPCAKRYLDEEDLSAPGCLI LDYRMPDRSGLDVQRALLLRRKPMLPIIFLSAHGDIGTAVHAMRNGAVDFLEKPVEPEAL LAKVRTAVAWSLDAFKREHDRRRMERQVLSLTGREREVIDLAVKGMQNKEIADLLGISVT TVKMYRANAFQKLGVNTILAASQFLARAENSLEQRA >gi|319803701|gb|ADMF01000040.1| GENE 7 7585 - 9012 1017 475 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 30 473 41 482 484 201 32.0 2e-51 MITRRQLFAGILGLTAGPSWCQPQETLAAADVIVVGAGLAGLSAAVSAREAGARRVLILE KDVMIGGHSIMSSGYFNAVDPKRQKPLGITDSPALMEKQSLQVGGDTASPILMRQLAESS SEVLQWLEAHGVHWSDQVFESYSSFQRRGHISSPVRAGYDYVMALLECARRLDVKILLGH RAERLITENGHIVGAAGVCRGCQAFEARAHAVILATGGFAANTALLENALGPYAATLRSS ANTRGILTDGAAGDGILMASAVGAKIVNMDSVLLVPYNGGRVTGYVGGDIYLTKEGRRFI DEGASWLALRKALQNLPDGKMWVLTDSGTVKNNDFSLKLMTGAVREAATLDEAAKGIGCN PAILEETVRQYNHSVHIGRDEAFGKTTMLKALDEPPFYYGEERLNIHSTEGGVAIDTQAR VLDQSEEPLLGLFAAGETVGNLHGKSRPGGNGVLACVVFGRIAGQEAARLSLSSH >gi|319803701|gb|ADMF01000040.1| GENE 8 9102 - 10766 1567 554 aa, chain - ## HITS:1 COG:ECs2408 KEGG:ns NR:ns ## COG: ECs2408 COG0318 # Protein_GI_number: 15831662 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Escherichia coli O157:H7 # 1 547 19 557 566 688 60.0 0 MRPEYTINPERRALYRRQGFWGDATLADYWHQSVRAVPDRTCVVDSQGGRYTYAQLDKKA QRLAGWMHTIGVGRGDVVALNLPGWAEFTIAYVAALKLGAIAMPLLPAWREAELSWALDW CEAKVVFTATAFRKSRPIEMLAKLAQHLPRLSAVVAVEKMAPLAPSLRSQEGVYAFEDVI AGAEPLLTPIPADADEVAAVLFTSGTEGRPKGVMLTHNNILASERAYADRLNLTWRDAFL MPAPLGHATGFLHGVTLPFILGGKSLLLDIFRADDCMNLFEAEKATCVLGATPFVFDILE ELRQHPRDLSSLRFFLCGGTTIPPKLFEDCRPFGIRLLSIYGSTESSPHSLVRLNDTREH TEETDGCAVDGVEIRVVDDARHEVPHGQEGEEASRGPQVFVGYWGEPEMTARALDADGWY YSGDYCRTDSEGRYIRITGRKKDIIVRGGENISSREVEDIVLEYPGVREAAVVAMPDERL GERSCACVSMRPGAPALHLTDLVAFFDGRRVAKYKFPEYLVVLDALPRTSSGKLQKFALA RMVRERVAAGQPSD >gi|319803701|gb|ADMF01000040.1| GENE 9 10880 - 11149 291 89 aa, chain - ## HITS:1 COG:STM1351 KEGG:ns NR:ns ## COG: STM1351 COG2440 # Protein_GI_number: 16764702 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Salmonella typhimurium LT2 # 1 89 9 97 97 131 67.0 3e-31 MDEKLGKDKFFVDEENAHIVLCDEPDRKEFRKLVKACPANLYKEADDGTISFDCAGCLEC GTCRVLCGDTILKKWEFPQGTFGVEFRFG >gi|319803701|gb|ADMF01000040.1| GENE 10 11176 - 12471 1526 431 aa, chain - ## HITS:1 COG:STM1352 KEGG:ns NR:ns ## COG: STM1352 COG0644 # Protein_GI_number: 16764703 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Salmonella typhimurium LT2 # 1 431 1 428 428 537 65.0 1e-152 MSEDKFDAIVVGAGVAGCVAAYVLAKEGLDVLVIERGNYAGSKNMTGGRLYAHSLERVMP GFAEEAPVERLVTREKISFITDDDSVTLDYHTGEAFSAEAASYTVLRGKFDQWLQEKAES EGAQFIPGIRVDRLLQDETGRVTGVQAGEDELLAECVILADGVNSLLAQSIGLLPKYHAH QYAVGAKEVIGLSKQVINDRFGLSDGEGAAWLFAGSASAGLMGGGFLYTNEDSISLGVVC GLGDIERSPKTVPQMLEDLKNHPSVKPLIEGGELLEYSGHLVPEGGYDMVPEKLAADGVL ITGDAAALCINLGFIVRGMDLAVASGECAARAVIDAKKAGDFSAAGLAGYRRRLEESFVL RDMKQYRNVPHLMENPRLFSDYPKMTAGIMRDLFRYDGSPVPPVRKSLWQRVKAAGVMNL LKDGYGWGKAL >gi|319803701|gb|ADMF01000040.1| GENE 11 12639 - 13565 1397 308 aa, chain - ## HITS:1 COG:ECs2405 KEGG:ns NR:ns ## COG: ECs2405 COG2025 # Protein_GI_number: 15831659 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Escherichia coli O157:H7 # 1 308 1 311 312 285 51.0 1e-76 MSKIQTVWVYADAAERYADLIAGARRFGAVVNAVVPCESCAAELRACGPAAVYNLGLAEG EAIENYAETIASLAQGEGNLFLFDATRRSKALAAGVAAKRGAGLVNDALSLEAGDAVKAT FRTYGGLAAAAVRIVSADAVVTVGAGVFEPEPADASADIPVIAVEKVAPAAAIVVKERRA KAAASVDLTKAKRVIGIGRGIAKQEDIAMIEAFAKAIGAEIGCSRPIAEGEHWMERERYI GVSGTQLKADIYIALGISGQIQHMVGAADCGVILAVNKDKNAPIFKDADAGIVGDLYKIV PELTRALS >gi|319803701|gb|ADMF01000040.1| GENE 12 13590 - 14351 872 253 aa, chain - ## HITS:1 COG:ECs2404 KEGG:ns NR:ns ## COG: ECs2404 COG2086 # Protein_GI_number: 15831658 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Escherichia coli O157:H7 # 1 252 1 253 254 280 59.0 1e-75 MHIVSCFKVVPEEQDIVVTPDQKLSFDRADFKISQFDLNGIEAAVQLAGEGDVVTALSVG GKILENSKLKKDVLSRGPSELCLVKDDAAFEGALAETTASAIAAAARTTGFDLLVFGEGS GDLYAQQTGLLAARMLGVPCVNAVSSIEKTEAGIRVERSLENEVEVIELPLPAAVCVTSD INVPRIPTMKAILGAGKKPAKTLSTADIGWTAPVKTVELDAIEVPPRKERAHEVLEGDSA VADFAARIKSALK >gi|319803701|gb|ADMF01000040.1| GENE 13 15714 - 16961 1666 415 aa, chain + ## HITS:1 COG:ydiN KEGG:ns NR:ns ## COG: ydiN COG0477 # Protein_GI_number: 16129647 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 1 415 1 415 423 485 63.0 1e-137 MTKPNSAAGSTSFLVAAIGIYVAYFLHGASVIALAQNMSALAEKFATDSAGIAYLISGIG LGRLVTILFFGALSDKFGRRSMILLGLVLYVLFFLGIPYSPNLTVAFILAFCVGAANSAI DTGGYPAMIECFPKASSSAVILLKAMVSFGQMLYPMCVSFLMVSGLWYGWAFIVPGAILI VLSLFIIKCRFPGTSGSGAAGADVPQMRAKPKMMLEGLVAVVFGVCAFSTFYVVAVWMPR YAAAFGGMTEAESLTTISYYSIGSLVCVFAFAYLLKSKVRSVWAMTLNGLIACVASAVLY LYPSPFVCTAGAFLIGFSAAGGILQLGVAVMAEFFPDSKAKVTSVYMMMGGLANFVIPLA TGYLSQISIRYVILLDFGLAVLTFLSAIYLFKRYYAVFRIPHNDLRWGERAVANK >gi|319803701|gb|ADMF01000040.1| GENE 14 17098 - 17961 1459 287 aa, chain + ## HITS:1 COG:ydiB KEGG:ns NR:ns ## COG: ydiB COG0169 # Protein_GI_number: 16129648 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli K12 # 1 286 1 286 288 445 75.0 1e-125 MEVTAKYELIGLMAYPIRHSLSPTMQNCALEKMGLPICYMAFEVDNASFPDAIKGLRALK MRGTGVSMPNKQLAIEYVDELDPAAELAGAINTIVNKDGRLIGYNTDGTGHLHGIKETGF DPKGKTMVLVGAGGAATAIGARAAVEGFKEVKLFNRKDEFWEGAHAFAKRVNEKTDCVVT VHDLDDTATFRAAIDSADVLTNATKVGMKPLHELFVVGDASWLRPGLVVSECVYNPHITK LLTQAKEAGCTTVDGYAMLLWQGWEQFKLWTGEDFPIEYVKEKMGFK >gi|319803701|gb|ADMF01000040.1| GENE 15 18113 - 18871 947 252 aa, chain + ## HITS:1 COG:STM1358 KEGG:ns NR:ns ## COG: STM1358 COG0710 # Protein_GI_number: 16764709 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Salmonella typhimurium LT2 # 1 252 1 252 252 319 69.0 3e-87 MKTVQIKNITVGEGAPKIIVSLMAKDLAAVKSEAAAYAAADFDILEWRGDHFAAVTDSAA VLEALKTLRAAFPEKPILFTFRSKHEGGEAELTADDYIALNIAVAETGLVDLIDLELFTG DELVKNAIAAAHARGVKVIMSNHDFHKTPAKDEIIYRLRRMQELGADIPKIALMPTCRQD VLTVLSATVDMAEKYADRPIITMSMGKTGVTSRLTGEAFGSAATFGAVKTASAPGQISVA DLRTVLTIINKA >gi|319803701|gb|ADMF01000040.1| GENE 16 19060 - 20652 2301 530 aa, chain + ## HITS:1 COG:ydiF KEGG:ns NR:ns ## COG: ydiF COG4670 # Protein_GI_number: 16129650 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase # Organism: Escherichia coli K12 # 1 529 1 529 531 919 82.0 0 MTFARPKRINGRVPVLTAEEAVKYIPDESTLCVLGAGGGILEATKLIEALAERYKTTQTP KNIGIISPTGLGDRAERGISPIAQEGLVKWALCGHWGQSPRISELAEQNKIFAYNYPQGV LTQMLRASAAHQPGILSEIGLGTFVDPRNQGGKLNDITKEDLISLVNLEGKEYLYYKTVA PNVAFIRATTCDSEGYATFEDEVMYLDALVIAEAVHNNGGIVMMQVQKMVKKATLHPKAV RIPGYLVDIVVVDPAQTQLYGGAPVNRFISGDFTLDDSERVKIPLNQRKVVARRALYEMK KGAIGNVGVGIADGIGLVAREEGCDEDFVLTVETGPIGGITTQGVAFGANVNTRAILDMT AQFDFYHGGGLDVCYLSFAEVDQHGNVNVHKFNGKIMGTGGFIDISATSRKIVFCGTLTA GGLKTEVGEGSLRITQEGRVTKFVESLPEITFSGKVALERGLDVRYITERAVFTLKEDGL HLIEVAPGVDIERDVCSKMAFRPIIDENLKTMDPCLFTDAVMGFKLPDGE >gi|319803701|gb|ADMF01000040.1| GENE 17 20689 - 21843 1589 384 aa, chain + ## HITS:1 COG:ECs2402 KEGG:ns NR:ns ## COG: ECs2402 COG1960 # Protein_GI_number: 15831656 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Escherichia coli O157:H7 # 1 384 17 400 401 655 79.0 0 MAIDFTMTEEQELLLSSIRELINNEFPEEYFRTHDEEGKYPREFVKALAENGISLLGVPE EHGGIPADYVTQMLAIMEIAKCGAPAFLMTNGQCMHSMIHFGSPEQLRLTAESTSTTGDP AYSLALTEPGAGSDNNAATTTWERKDGKIVINGQKTFITGAAEYPYMLVLARDPKCEDPK LAFSLFWVDAKAPGVKINPLHKIGWHLVSTCEVYLDNVVVEEKDMVGEEGKGFLNVMYNF EMERLINASRCTGFAECAFEDAARYANQRIAFGKPIGFNQMIQEKLALMKVKCMNMRHLV LSCAVQADRKESMRETAALAKLYCARTALEVIDDAIQIMGGLGYTNDARVSRLWRDVRCE RIGGGTDEIMIYIAGRQILKAFRD >gi|319803701|gb|ADMF01000040.1| GENE 18 22020 - 24890 1604 956 aa, chain - ## HITS:1 COG:no KEGG:Dvul_2968 NR:ns ## KEGG: Dvul_2968 # Name: not_defined # Def: outer membrane autotransporter # Organism: D.vulgaris_DP4 # Pathway: not_defined # 695 956 460 721 721 79 29.0 5e-13 MKKRKLTPLTIALGLALVGNAYAANIVDGTLINSSTSFDEDTVYTVAAGSTTVASNSTDV PVVITIAEGKTLTLENTFANTQSKVIDASSKSGMVFEGGNVILRRDDTGSDKATEQYFIR ATDGQILFGGPAPQIIGGVEFKNASTKMEGTIAQGIYVMGATSFTEGFDMTLNRSDAAIT TPENTTGVHLEGGSLYTKSATIKMIAGAKDVAMRGIWVEAGGDMQAGSLDLDLDANNNSV ISQTLTGLVVSSTTAGKAAFLVTGDVNISIKNTKNKDVVVRGMALSSDRDYSFGGTTNIE IANAVNAFGLDTSKEVNFGGDLNIKLSQINGADNYKKGVVGINTTGNKNNGTVGNVTVKR ADIRITDSQTQYDYVPVRAVSTEGDSQVTFTDSLATNAGLQSVANSTIDVQKSFVTSDPV ALTAQADSTILVNSSKQGTVHFSGYTERTASWGGTPNSTISMNIGSGADGDDSYWNVTQA STLTNLSLAKNASLYFKVRDTDLDGTDALITVTGAAATAVELASGSSIALYGSGFDLEAG KTIQLIKSDKGIVKDGKALDKGDSLDDLKGDLTVIDIKSLIRATETGFSKDQYDLSMKTE ELLIATLKEKAPAPTPDPDPDPDPNPDPKPNPDPVPEPDRPSGDKVNDQTNALMQSSIAA AATMFAADELLIDTTMKSRQGVRQTGPFAAARVGRYDLDVRGDLETNVISGLLGYAVNLQ GSEIGAFVEMGHGTYDTKTTVTSPVGETKGDGKHNYVGFGVYGNCATPIDWLHVTGYVKG GWLRNEFSAPIAGVSVDFDRTSNYWGAHLGMYGEFQAAGKIKNRTFLNYFYDGRESESYE ASGSSEVAGARFHFDALNVHRVQAGSLIEYQYSSTLRPYASVAYEYAFKANAEGSARDHI GTLAMNGTDLEGGTGILSLGWTYLNEANTFEFDCGVNGYAGVRKGVSAQLQAAWKF >gi|319803701|gb|ADMF01000040.1| GENE 19 25307 - 26281 1031 324 aa, chain - ## HITS:1 COG:MA0367 KEGG:ns NR:ns ## COG: MA0367 COG2768 # Protein_GI_number: 20089264 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S center protein # Organism: Methanosarcina acetivorans str.C2A # 19 323 48 353 355 233 42.0 3e-61 MTRKDFLKTAGACALGAVGTAAGAAVPAAGTETGRAKVYFSPVIDSDHLNKLYDLIKDNL SGKIAIKLHTGERHGPNILPREMVKSLQARIPESTIVETNTLYHGDRYTTEDHLKTLEIN GWTFCPVDIMDAEGTVNLPVKGGKHFKEVSMGGHIVNYDSMLVLTHFKGHAMGGFGGSMK NIAIGCADGRIGKQQVHAVSDVNLPWDQWPGKEMLMETMAESAKAVCDYFGKKIVFINVL RRMSVDCDCAGTSAAEPTIPDIGILASTDILAIDQASVDLVYGRPAAEKHDLVERIESRR GLHQLTAMKALGMGNDQYDLITVP >gi|319803701|gb|ADMF01000040.1| GENE 20 26584 - 27933 1677 449 aa, chain + ## HITS:1 COG:PA1418 KEGG:ns NR:ns ## COG: PA1418 COG0591 # Protein_GI_number: 15596615 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Pseudomonas aeruginosa # 3 377 6 396 463 68 24.0 2e-11 MNYLTLLVLAYLAALLWFGIRGGTRERELNAFLTAGGSAGALLCAFSLVSTIIGGSATLG MGALAQKVGPAAFWWLGVGAIGLFLHGLIIAPVIRKLPVVTLPDVLRHLAGPAAEKWAGA IIALSWAAVTAAQFTALRALLHSISGGMTAEVLYVLLAAGIVLHTALGGQRGILRADFLH TILLLGGFSAAALWCVMERSADIAALPVMPFTETFGLGDWVKMMLLVGITYLIGPDMFSR TFAAKNAQTARRAAWTAAPLLVFFGVIVTMLALLNIKAEQPISDWLAVGSPLPAAAAAAL SMGLISALAGSADTILLSAAGIIEKDLFGGARARAVRLWAAGVGILAALAAYTSGDIIGW LLKGYALFVPGVAVPLLVLVAGRARHADPKLWTIGAAAGGLGGLIGSLTGITLWTYGGIA AGALFAVFAVRRAAQSRPTAAASPLQPLS >gi|319803701|gb|ADMF01000040.1| GENE 21 28100 - 29614 1742 504 aa, chain + ## HITS:1 COG:MA4007 KEGG:ns NR:ns ## COG: MA4007 COG0696 # Protein_GI_number: 20092802 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Methanosarcina acetivorans str.C2A # 1 500 17 518 521 451 49.0 1e-126 MILDGWGIGGGAADPADAISAAHPAFIESLAARYPHAELRTYGENVGLPEGQMGNSEVGH LNIGAGRVVYQDLVRINRACAHDKLLEQPECRAMFEYLKASGKALHLMGLFSDGGVHASF DHLLAFIDLARREGIEHVYVHAFMDGRDTDPKSGLGFVETLERKLSEPGERAQLVSLIGR YYAMDRDKRWERIEEAWQQLVNGKGTHSRDLAESVRASYAAGVTDEFIKPVVKTDEADRP VGTLQADDAVLFINFRNDRARELTSVLTQAPQGSMHPLPLWFATMTPYDAAFKGLHVLFA KENVVNPIGEYVSSLGLKQLRIAETEKYAHVTFFLNGGREEPFANEDRILVPSPKVATYD LQPEMSAPEVAQKLSAALLSGQYDFICLNFANGDMVGHTGVWSAIEKAVRTVDDCVKQVI EAAQASGTDVVIIADHGNADHARNADGSPNTAHSLNPVPIIVVSPRAKAVHNGVLADVAP TVLTLMGVPVPPEMTGKPLVELKA >gi|319803701|gb|ADMF01000040.1| GENE 22 29816 - 30868 662 350 aa, chain - ## HITS:1 COG:FN1000 KEGG:ns NR:ns ## COG: FN1000 COG0502 # Protein_GI_number: 19704335 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Fusobacterium nucleatum # 17 322 50 359 360 245 40.0 8e-65 MPVLQPIIDRIARNETISRDEALAFASDSALRADLFDTAAEATKRFASRIFNICGIVSIK TGACSCNCKWCAQSTHWTSSSIPIHPILPVSEVDASAERAAAGGITRFSLVASGRKPSAR ETRMYAEHLKKLRSTNPKLELCASLGLLNEKDLAVLKDAGLVRVHCNLETSERFFPQVCS SHTWEDKVKTIRAAKAAGLEVCSGGLFGMGETAEDRIDLAFALRELEVPSIPLNLLDPRP GTPLEHAPKLSEDHFLTTVALYRLINPQAELRFAGGRLQLSEYAVREAMRIGVNSAICGS LLTTDTMGPTAEAERFMAAGYEADEVMADVLERSGGTDCEEDAVCAACAS >gi|319803701|gb|ADMF01000040.1| GENE 23 30988 - 31974 865 328 aa, chain - ## HITS:1 COG:ECs4401 KEGG:ns NR:ns ## COG: ECs4401 COG0583 # Protein_GI_number: 15833655 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 3 297 24 319 323 117 27.0 3e-26 MAKTDDLQAWRSFIVFARSGTLTAAAKALETEPSSISRAISGLERTLGVELIRHGVRPLV LTDAGRMAHKRMETILRAHDSLMDALKDDNRTLEGKIRLSSAPGFAARHLTTLLQRFQIE HPGITVEILAGLKEADVQKGLCEVATLTGIPTLPNLVYMSRGRNVYVAAASPDYIARCGM PVRPADLRRHSGYVYCGPVRPETKVLQRGSETEAVQYASAVRSTDILAIRAAVLKGMGCA ADLPLVQIADDLKAGRLVPILPGWSHPAVECFIVTSRSAWHTKRVRIFLEWYARAMQALF AGFEREASPYVGLPADMPVVDRSQIFMT >gi|319803701|gb|ADMF01000040.1| GENE 24 31856 - 32080 63 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAREILEGSVSSAFAAAVSVPLLAKTMKERQACRSSVFAIKASLLYCTQHLLLHEGTPKP NRFAAAASFHDVSA >gi|319803701|gb|ADMF01000040.1| GENE 25 32266 - 33690 1663 474 aa, chain + ## HITS:1 COG:BS_argH KEGG:ns NR:ns ## COG: BS_argH COG0165 # Protein_GI_number: 16079996 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus subtilis # 24 446 49 457 461 152 27.0 2e-36 MQRDEFFWTSTINKATIVVNAAEGLLSKEAAREAAGGVARLEAKAEKDPALRVKSYIAYE PLLIAETSPAVTLIHAGRSSQDILSTQRTAILRDRTVQVAKAFDAVIGKLLDLAEANRHT IVPNYTNGVAAQPNSYAHYLLGITAAFLRDRERLNECLTRYNACAMGSTVLNGTGWPLNR EAMAVRLGFPAPRRNAFDATCMSPADMPFELASINASAALHVGSFISDVMVQYAQPRPWI LLQEGGENTYVSSAMPQKRNPGLMNNCRADASDVVGEMAAAAARIHNLVPGMVDGKNVAK NGRMMDAAVGMFSRFLKVLCALRINPDRALEELNSDWTASQEIADRLMKDHGLPFRIGHH MASRMVSWARANNVLPLDFPYAQMQAIYREEIEEEFPEADPVLPMSETEFKDALDPRKII ENRRTAGSAAPAEVDAMIREDRAALAQLSAVTAEVEKRTNDALAALEAEFKHFL >gi|319803701|gb|ADMF01000040.1| GENE 26 33724 - 35094 1889 456 aa, chain + ## HITS:1 COG:PM0933 KEGG:ns NR:ns ## COG: PM0933 COG3069 # Protein_GI_number: 15602798 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 8 450 6 456 462 276 41.0 9e-74 MYALMPWIAVIVTALAGWALIKRYSTHMVLLFAGLAILLCAVVLGDPNFLPKGVKPSGFV LFDIFNTLKSIATKQSAGIGFLIMTAGGFAAYMDRIGAAKALVDIAVKPLSMLRAPYLVL VGGYFVGQILVMVIPSAAGLAMLLLVALFPILKAVGTSAAAAAAVIGTSAGVTFAPTAGT ANLAAQVGSLDPVIYLVQYQLPVAVPTFIVIAAAHYFVQRFYDKKNDDVYTDVSAAKAAD QPAAPKWYAVFPILPIALLIIFSKLVVASIKLDTVSALFMVWIGVVIIEIIRSRDVKKVF KDGLAMFQSMGKMFAGIVALIICAEFFATGLKVSGLIDILINSAQGVGAGMGAMTVILTA IVSIVTFLTGSGVGAYSSFATLAPDVAAGLGGSVAELVTPMQFASGLLRAMSPVAGVIIA VAGAAGVSPMAIVRRTWIPMILGIITAIIANEIFIG >gi|319803701|gb|ADMF01000040.1| GENE 27 35647 - 36189 492 180 aa, chain + ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 2 160 5 164 663 139 45.0 4e-33 MLTIGIDLGSTTVKYALLSESGVLLSHDYVRHGSAVKQTLEKVLRALALRTHDAPVHVLF SGSGALGLADALGAGFVQEVIAASRYLKHRAPDLDAAIELGGEDAKLLYLSNGVELRMNE ACAGGTGAFIDQMASLLDVDAAELNKLASEAQISHPMASRLRCVCQNRFGGALERRRAEV >gi|319803701|gb|ADMF01000040.1| GENE 28 36155 - 40024 2938 1289 aa, chain + ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 3 497 176 663 663 442 45.0 1e-123 MALLNGGVPKSEVARSVLDAVAEQTVSGLACGRPVRGKIAFLGGPLTFLSELRAAFERRL SSTGTTFASFCDAHCAVAIGAALEGMDPASRAHRSRVWHSIDDLVREILAAASENRGSGL PPLFKNPAEREAFTERHRRERVERSPIENAEGDLFLGADLGSTTVKGVVLDTQGRLLYSW YEQNEGQPLERLYRAVKALLSVVPAKAHIRQACTTGYGADLARAALGAAFSEVETLAHER AAAAFEPNVSYVIDIGGQDMKCLEVEHGLIRSVKLNEACSSGCGSFLQTFAKQLSLTLPQ FVEAALASKEPCDLGTRCTVFMNSKVRQAQRDGASLEDIAAGLCRSIVRNALYKVLRIHD PAELGEHVVVQGGTFLNDAVLRAFEEQIGRPVIRPDIAGLMGAYGAALIAMERSSAAVPE IDLDPAKLDAGKVIQRELLCRGCGNHCRLTMNRFPSGDKFFSGNRCDFAQKSAGAGRRKK ASFIDWKLERLFAGEPLPLEAAAMGVVGIPRALNTYEHYPYWFKLFSCLGFRVELSRPSD HALASSASETVPSQSLCFPAKLAHGHAADLARKGIADIWMPCVPLEGPRHSGEKHIDGRF ACPVAGGYPEAMRLSLASTLPNARILTPFVDLEFPESVVRAVTSAWPALSPKKVREAVDA AHAALEDYRAAVRQAGEALWRRHETSGEPLIVLAGRPYHLDPLINHGLPALIESMGAEVV TEDAVAHLAAVPSDIEVVNQWTFHSRLYRAAALVRESRSAELVQLMSFGCGIDAVTSEQI ERLLAQRGRIATTLKIDEGDTLGAARIRLKSLLAALADRRRSDQKAAAESLEDMTKRTDT PVPLGKMLADRVIYAPQMAPIHFPVICAALGAVGWRVELLPEVRPQAIEEGLKHVNNDAC YPAIVVIGQLLDALKTHAIDPDHSALLLAQTCGPCRATNYPTLLRWALKDLHMERVPVVC LSGGSIEGAQTLNVGLGGLKRLMLATLYGDMLQRLSLHVRSHELEPGDAQRLVERWTARA AQAAAAGDARRFADDARAMVRDFFAVPMDGTEKIRVGIVGEILLKYHPAANLGIVQEIID EGAEPVLGDLAAFFLYCLYDHINQAKAFGGPRLKAMGAWLMIRWFEHLRGIMRKALDGTP VAGVSTLAEDLERIDGLVSAGQEAGEGWLLTAEMVEFIHSGTPNVVCLQPFGCLPNHVTG KGVIRRLREENPLANICAIDFEAGTSKTNVSNRLKLFLAQARENFERGIAVDEPVPTAHR IIPITPSANIAVDAAESPHKDRGGGQAAC >gi|319803701|gb|ADMF01000040.1| GENE 29 40140 - 41336 1580 398 aa, chain - ## HITS:1 COG:RSc2855 KEGG:ns NR:ns ## COG: RSc2855 COG3203 # Protein_GI_number: 17547574 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 265 1 265 389 103 33.0 6e-22 MKKTLAALAVLGAFAGSAAAADVTLYGVVDLGLNYQYSKVGDADAVNTFKEQAGQNSGSR FGLKGTEDLGNGVKVGFILENGFAADDGTMSQGGRLFGREANLFVTGDFGTLSMGRVGAL SAGVGSYNVVYGYTVFGTGWGDTAGAKSLFNLSDRDRMDNTVTYVTPSFAGVKVYAQYSF NRSGQEAAGNERNNDRYAALGAKYELGAFSTGLVVDTVLNRNGTDANSEDSLGVTWGASY DFGVAKVYGMAQYGKNENKMGGYSVNDVTGTIRSGNKVKFTAGEGLEGYALTLGATAPLL GGTVYAQANYFDGESSENIASAETNADGDTLTTFVKSADMKRYGAAVGYSYPFSKRTFAY SFAAYSEGKLEVTGINDHLTAETKTKKGEFGVGLVHKF Prediction of potential genes in microbial genomes Time: Sun May 29 20:30:02 2011 Seq name: gi|319803661|gb|ADMF01000041.1| Sutterella wadsworthensis 3_1_45B cont1.41, whole genome shotgun sequence Length of sequence - 39678 bp Number of predicted genes - 39, with homology - 30 Number of transcription units - 19, operones - 8 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 312 133 ## - Prom 332 - 391 6.1 - Term 364 - 393 -0.5 2 1 Op 2 8/0.000 - CDS 409 - 843 558 ## COG4566 Response regulator 3 1 Op 3 . - CDS 840 - 2603 1164 ## COG0642 Signal transduction histidine kinase 4 2 Tu 1 . + CDS 2781 - 4253 1979 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 4276 - 4304 1.4 5 3 Tu 1 . - CDS 4745 - 4954 112 ## 6 4 Op 1 . + CDS 4981 - 6186 441 ## COG3344 Retron-type reverse transcriptase 7 4 Op 2 . + CDS 6220 - 6411 83 ## + Term 6421 - 6460 0.4 + Prom 6737 - 6796 1.9 8 5 Tu 1 . + CDS 6872 - 7243 597 ## - Term 7006 - 7050 0.5 9 6 Tu 1 . - CDS 7249 - 8262 996 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 8289 - 8348 2.5 + Prom 8609 - 8668 4.1 10 7 Op 1 7/0.000 + CDS 8777 - 9805 1446 ## COG4150 ABC-type sulfate transport system, periplasmic component 11 7 Op 2 17/0.000 + CDS 9824 - 10651 912 ## COG0555 ABC-type sulfate transport system, permease component 12 7 Op 3 17/0.000 + CDS 10648 - 11460 962 ## COG4208 ABC-type sulfate transport system, permease component 13 7 Op 4 5/0.000 + CDS 11485 - 12714 1192 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 14 7 Op 5 . + CDS 12739 - 13629 538 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 13713 - 13767 11.2 15 8 Tu 1 . + CDS 13774 - 14235 302 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance + Prom 14265 - 14324 5.0 16 9 Op 1 . + CDS 14383 - 14940 738 ## COG2032 Cu/Zn superoxide dismutase + Term 14970 - 15018 12.0 + Prom 14979 - 15038 2.1 17 9 Op 2 . + CDS 15189 - 15635 585 ## + Term 15657 - 15709 16.2 - Term 15652 - 15690 7.3 18 10 Op 1 24/0.000 - CDS 15792 - 17069 1845 ## COG0004 Ammonia permease 19 10 Op 2 . - CDS 17137 - 17475 557 ## COG0347 Nitrogen regulatory protein PII + Prom 17900 - 17959 2.2 20 11 Tu 1 . + CDS 18086 - 18439 345 ## + Prom 18703 - 18762 5.2 21 12 Op 1 17/0.000 + CDS 18838 - 19578 394 ## COG0500 SAM-dependent methyltransferases 22 12 Op 2 2/0.000 + CDS 19575 - 20378 768 ## COG0500 SAM-dependent methyltransferases 23 12 Op 3 49/0.000 + CDS 20375 - 21319 1004 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 24 12 Op 4 5/0.000 + CDS 21316 - 22173 806 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 25 12 Op 5 5/0.000 + CDS 22255 - 23844 1707 ## COG0747 ABC-type dipeptide transport system, periplasmic component 26 12 Op 6 . + CDS 23860 - 24663 310 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 27 12 Op 7 . + CDS 24660 - 25463 219 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Term 25637 - 25689 7.9 28 13 Tu 1 . - CDS 25779 - 26135 330 ## - Prom 26172 - 26231 4.4 + Prom 26151 - 26210 1.9 29 14 Op 1 . + CDS 26395 - 27084 654 ## COG0680 Ni,Fe-hydrogenase maturation factor 30 14 Op 2 . + CDS 27159 - 27494 346 ## SeSA_A1639 hydrogenase assembly chaperone HypC/HupF 31 14 Op 3 . + CDS 27535 - 28014 649 ## Tint_3080 hydrogenase-1 expression HyaE 32 14 Op 4 . + CDS 28055 - 28948 824 ## Xaut_2179 HupH hydrogenase expression protein 33 14 Op 5 . + CDS 28941 - 29264 369 ## COG1773 Rubredoxin - Term 29000 - 29041 -0.8 34 15 Tu 1 . - CDS 29261 - 29728 368 ## - Prom 29750 - 29809 3.4 35 16 Tu 1 . - CDS 30470 - 32635 1566 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 32836 - 32895 5.4 36 17 Tu 1 . - CDS 33420 - 35060 912 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 35196 - 35255 4.3 37 18 Tu 1 . + CDS 36200 - 37027 968 ## + Term 37075 - 37134 6.3 - Term 37063 - 37123 6.1 38 19 Op 1 . - CDS 37152 - 39209 1966 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 39 19 Op 2 . - CDS 39243 - 39677 332 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319803661|gb|ADMF01000041.1| GENE 1 3 - 312 133 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGARGLDSSCRAVAGLESSV >gi|319803661|gb|ADMF01000041.1| GENE 2 409 - 843 558 144 aa, chain - ## HITS:1 COG:mll0983 KEGG:ns NR:ns ## COG: mll0983 COG4566 # Protein_GI_number: 13471099 # Func_class: T Signal transduction mechanisms # Function: Response regulator # Organism: Mesorhizobium loti # 2 126 36 159 246 104 45.0 5e-23 MKPTVIRIVDDDSDVCDSLSCLLSLEGWEIRIYTDPKEFLAGDLLTDPGCLILDFRFPTT NGLEVQKVLIERQIRMPIIFLTAHGDIPLAVKAMQRGAVDFLTKPVDTDHLIAAIERALR VDTLHRHGFNPASRQKITQSPETK >gi|319803661|gb|ADMF01000041.1| GENE 3 840 - 2603 1164 587 aa, chain - ## HITS:1 COG:PM0724 KEGG:ns NR:ns ## COG: PM0724 COG0642 # Protein_GI_number: 15602589 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pasteurella multocida # 51 561 48 548 571 103 22.0 1e-21 MLFIRTTFTALALGFMLSASAAPSPSAPVLRVSVLKLTLSDMHSEVISETLEVLRRRLSN YRLIVSNDDLEAQHLAAQRGTADLFIGTAGFYWEIHQKGFTALGTLASPMAPNPNEGMAG AIIVRRSDAQIKTLEDLKGKSAAVTRKDAFMNAQTALGEISARGWDPDNFFSRIEEVGRP MERVVEAVATGRVDAGLVKAGLMELMLAAGSPFAKEIRVLEPRSGDSMKYLHTSSAYPGW TVIASAGLPPETLRNVTMALYAISPEEIWHSQWLPATDFARIDKLFKELRFGPYEYLRHW TAERIWKEYSLWILLFAAALLFGLLHTIRSDMLVRRRTAELAAASDRLNRLEKASVTAQL SNIVAHELLQPISAAGYYLAAIDKLLARNPNAFNTALGQQLSALCGKTRTTLQRCSTIIE RVRLYARSRASTPAKIELSSFIRVLADRLKQMHSLKIPPLLKLQPGVVLADAVELEVLLT NLLKNASEAAACADIPYVELYMDTLPNGAVKLTITNSCQPLTPAEQEALSSPLHSSKENG LGLGLAVVRSIAERNETDLLLSEDVPGIFRAVLTFQPTDPRQEGAAP >gi|319803661|gb|ADMF01000041.1| GENE 4 2781 - 4253 1979 490 aa, chain + ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 4 486 33 495 502 244 36.0 2e-64 MELSRRKLLVAAGAAAAVVPAAHAAQDPSLSDNVPKKWDRTVKLLIVGAGGAGLTAAVSA AQNGLTDTLILEKMAYIGGNTAISGGGMNAVDPARQKAQGIEDSIENHYEQTLKGGDYRA NPALVKELVENAPETVTWLESIGMKFKDKVYQVYGSLYPRGHAPLGSLGQDYIKVLVDQC KKYGIPIEKQARVVRIIRETPLKGKVLGVEYEKGGKLITVRATKAVVVAAGGFGANKKMR ALHDPRLADLTTTNHPGATGDLLPLMVDVGADLTGMDFIQCNPGCPPGRTHRVPLHQGGR FIIVDRNGKRFIREDERRDVIRDAVLIQPKATAWGILDQTRFDMINQGQKDAAYKGLETG DAWKADTIEELAQKMGLPPAALKATVDEFNAGVKAGKDKLGKFQRNLFPIEKPPFWGAYV GMSVHHTMGGVVINTAAEVIDRRGEVIPNLYAAGEVTGGIHGANRLGGNAIADCLTFGRL VGKEIAEKKA >gi|319803661|gb|ADMF01000041.1| GENE 5 4745 - 4954 112 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSLNLPLSSSAWPLFSAFVGLWTHVLPQASGHRLVWALLFKFDLRYCRRIGEFHALYLH NSDSALHDE >gi|319803661|gb|ADMF01000041.1| GENE 6 4981 - 6186 441 401 aa, chain + ## HITS:1 COG:BH0039 KEGG:ns NR:ns ## COG: BH0039 COG3344 # Protein_GI_number: 15612602 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 1 397 11 408 418 369 49.0 1e-102 MLLACKRVRVNKGALGVDGMTVDELEGHFRRHWASICAHIREGRYIPSPVKRVDIPKPDG GTRMLGIPTVQDRLIQQAIAQVLVEHFDPTFSEFSYGFRPGRSAHQAIEQTQRYIAEGCS WIVEMDLAKFFDTVNHDRLISVLERNCRDKMLIRLIRRYLRTGILADGLVTPRDEGTPQG SPLSPILSLIVLDELDKYLEKRGLKFCRYADDCNIYVASERAGNRVLTNTIKFIEETLKL RVNRDKSGVFRPRRAKFLGYTFVGKTGQPLVHPKSFKRLKDKLRAVFYRARGGSLFRTIG ELNAILRGWRQYFRLDNRKGVFAALDIHIRRHLRKLVWIAWKRPRTRERELQRRGLDDFR AWKSANNGRGAWWNANARHMRDAFPLSFFKQHGLYSLLAMR >gi|319803661|gb|ADMF01000041.1| GENE 7 6220 - 6411 83 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPNGTSERSALIEHCGVGGSVRKGTLYPIWCGSHMPSDEFLPRACYYRCGDWRSFLIVHR LPS >gi|319803661|gb|ADMF01000041.1| GENE 8 6872 - 7243 597 123 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTKTSALLLAAFCGFAVLASSSAVAREDTGLEGHWGGDLVSLKTGEKSSAELTLDHYGC YALSIKRDPGIETGFYTVQDGKVVLKTTGGAQRLTFIVEGERLKAEPTPDQPLPKDCCEL ERR >gi|319803661|gb|ADMF01000041.1| GENE 9 7249 - 8262 996 337 aa, chain - ## HITS:1 COG:ansB KEGG:ns NR:ns ## COG: ansB COG0252 # Protein_GI_number: 16130858 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli K12 # 7 337 23 348 348 235 44.0 1e-61 MTDSAKLPKIVILGTGGTIVSSGDDPLMLTGYRIKGLNVETLLCAVPELQYFARIEAHQI ANIDSSSMTFSIWLELGRAIEKAAADPDTAGIVVTHGTDTMEETAWFTHLTAKTQKPIVF TGAMRPATALSADGPLNLLNAVRIAADPKAAGRGVLVALNDVILSARDAMKISPTNAAAF GPNVQGPLGLIAGAEILWLGRPERAFGSETPFSIPKLAALEIPRVDIVYSHADDDGVMVR AACAAGARAIVHAGTGNGSIHCCTDEALADAADAGVLIIRASRVTTGAVTTGLAEWQERG YVPAGTLTPQKARVLAQLVVAEYGQVQSALAEAFSKY >gi|319803661|gb|ADMF01000041.1| GENE 10 8777 - 9805 1446 342 aa, chain + ## HITS:1 COG:ECs3296 KEGG:ns NR:ns ## COG: ECs3296 COG4150 # Protein_GI_number: 15832550 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 29 341 25 337 338 479 74.0 1e-135 MNTSIFKQTAAGFALAALLGASAAVPASAAELLNSSYDVARELFTALNKPFIAEWDKAHP DDKLTIRQSHAGSSKQALAILQGQKADVVTFNQVTDIQVLHDKGKLIPADWQARLPNRSS PWYSTMAFLVRKGNPKNIQDWSDLARPDVKLVFPNPKTSGNARYTYLAAWESADQANGGN KAQTEEFMKKFLKNVAVFDTGGRGATTTFNDRGIGDVLISFESEINNIRNLYKDKDYVVV VPKTDILAEFPVAWVDKVVEAKGTLEPAKAYLNYLYSPQAREIVTSFYYRVNDQKTMDAL KDRFPATKLFTVEDKFGSWEKVMKEHFAAGAEFDRLVAAGRQ >gi|319803661|gb|ADMF01000041.1| GENE 11 9824 - 10651 912 275 aa, chain + ## HITS:1 COG:YPO3014 KEGG:ns NR:ns ## COG: YPO3014 COG0555 # Protein_GI_number: 16123193 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Yersinia pestis # 4 272 7 275 277 307 67.0 1e-83 MRRRRVLPGFGLSLGTSVLFVSLVLLLPMTALVVQLSELTWAQYWAILTHPQTTAAFRVT ILSAFWASVINALLGLLLAWILVRYRFPGRRLLDGLIDLPFVLPTAVAGLTLSALFAADG WYGTVLAPFGIKVSYTWLGIVAAMAFTSIPFVVRSVQPVLAEVNRSCEEAALTLGASRLQ IFRRVILPEIAPALAAGTVLAFCRSLGEFGAIIFISGNIAFETEVLSLAIFMRLQEFDYP AASAIASVVLGLSLVLFIAANQLLKRFARRIGSPS >gi|319803661|gb|ADMF01000041.1| GENE 12 10648 - 11460 962 270 aa, chain + ## HITS:1 COG:cysWm KEGG:ns NR:ns ## COG: cysWm COG4208 # Protein_GI_number: 16132224 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Escherichia coli K12 # 13 264 18 269 291 347 71.0 1e-95 MSAQLQANRQTPAQWALIGLGILAAGLFLAVPLVFIFIQAFQKGIAPVLENLVHPEMIHA VALTVFIALITVPVNMIFGVMLAWAVTRFSFPGKTVLLSCIDIPFAVSPVVAGLIYLLWY GANGPLAPWLDAAQVQILFAWPGMVLVTIFVTCPFVARELIPLMTSQGSSEEEAALLLGA SPWQMFFRVTLPKISGALLYGVLLTNARAIGEFGAVSVVSGSVRGETMTLPLQIELLEQD YNTVGAFTAAALLALLALATLFLRRHRRRA >gi|319803661|gb|ADMF01000041.1| GENE 13 11485 - 12714 1192 409 aa, chain + ## HITS:1 COG:cysA KEGG:ns NR:ns ## COG: cysA COG1118 # Protein_GI_number: 16130348 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Escherichia coli K12 # 1 370 1 352 365 378 55.0 1e-105 MSIDIENIRKRFGNAEVLSDINLKIASGEMIALLGPSGSGKTTLLRILAGLETETSGRIR FGKSDVTQLTAAERRVGFVFQNYALFRHMTVAENVAFGLTVKPRSERLPKAEIEKRVAEL LAMVQLSDKAGHYPAQLSGGQQQRVALARVLAVEPQVLLLDEPFGALDAQVREELRQWIK RLHRELGFTGVFVTHDQEEAMQVADRVVVMHNGRIEQADKPAEIWEHPKTRFVIEFLSDV NRIPAMISNGRLHVGTIDLALDGGADGTPVVDPKSIPDGPADLLLRPKDARMRRLEAEED SAAAQKAGLLPVVIRSAVPKGGAIQVEAEPEGWYENALNAYVLEDALPRLGRGYLMSFER AYLYRGEERLPVHVRKPRWPFVGEHGHEHSSPEAAEPPKALKHEAALFI >gi|319803661|gb|ADMF01000041.1| GENE 14 12739 - 13629 538 296 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 6 294 7 304 308 211 39 4e-54 MSAETVIDVVGATPLVRLEHLVPHNGSEVWVKFEGNNPAGSIKDRAARSMIEEAEKRGDI KPGDALVEATSGNTGIALAMIAALKGYRMKIILPANSTAERCAAIQAYGAELILSPAEKG MEGARDLANAMAQHGEGWQLDQFNNPDNPLAHYRTTGPEIWTQTAGRVTHFVSAMGTTGT ITGTSRFLKEKNPNVRVVGLQPAEGSRIPGIRRWPAEYRPGIYRPELVDETLDILQKDAE DTVRALARREGICCGISSGGAVSGALRVAAANPGAVIVTIICDRGDRYLSTGIFNQ >gi|319803661|gb|ADMF01000041.1| GENE 15 13774 - 14235 302 153 aa, chain + ## HITS:1 COG:YPO1067 KEGG:ns NR:ns ## COG: YPO1067 COG3015 # Protein_GI_number: 16121368 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Yersinia pestis # 2 144 18 139 242 60 30.0 9e-10 MKLAHTALIAAAAGVLTVTLAGCSAPTNGERSPAFAAAESLQPSEASAASIGVYEGLLPC GDCAGLRTTIYVRADGTYTRIYTYEGEKDDLGRTPSFSEAGSWKLEGRRFTFTPKDHSPA WLADSTEHGLRLLDGEGSPVEGPLGPMYDLQKR >gi|319803661|gb|ADMF01000041.1| GENE 16 14383 - 14940 738 185 aa, chain + ## HITS:1 COG:PM1952 KEGG:ns NR:ns ## COG: PM1952 COG2032 # Protein_GI_number: 15603817 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Pasteurella multocida # 35 185 31 186 186 174 60.0 6e-44 MKAFSMLASAMLAAAVALPAVAADQTKLYDPMAEAEKIVVPVELLNQDGAKPIGNVVIVK NAYGLAFYPQLKDLAPGLHGFHVHANPDCGLTEKGLGMKAGGHWDPDKTGNHSYPWDDKG HKGDLPSLYVNADGVANVPVLAPKLKTLDEVRNHALMIHVGGDNFHDHPAALGGGGARMA CGVIK >gi|319803661|gb|ADMF01000041.1| GENE 17 15189 - 15635 585 148 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTRTHAYQMTAAACCLAVLLAGCATTNGPVPMPQAPAPVETPDVKTVKAMVLPIDDTVTV AEAFAQYGSCRPGSQVWEEIEDGDVQFSCTFDDGALVQFDFRKGDDEKFKIAMVTFTSMN DAEFAGVSVRGPDAEDMLKRVYFNQKLF >gi|319803661|gb|ADMF01000041.1| GENE 18 15792 - 17069 1845 425 aa, chain - ## HITS:1 COG:BMEI0167 KEGG:ns NR:ns ## COG: BMEI0167 COG0004 # Protein_GI_number: 17986451 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Brucella melitensis # 2 425 10 433 433 373 56.0 1e-103 MTSLKKLLPALALGIAAIPAFAGDEPALDKADTAWIMVAGLLVLFMTIPGIALFYAGMVR KKNMLSTLAQSVAICGLMSILWYAVGYSLAFSEGTPFIGGLSKAFLSGISISTLSGSIPE LLFVFFQMTFAILTPALITGSLAERMKFSSLCVFMVAWSLLVYAPICHWVWASDGFFFQM GALDYAGGTVVHINAGIAGLVACLMLGRRTGYGSQHLAPANLTFAMIGACLLWFGWMGFN GGSGLAANERAVMAILVTQIAAAAGTISWMAAEWISRGKPSLLGMISGAVAGLVAITPAS GFVEPAPALFIGLVAGVLCFWMVAVVKAKLGYDDSLDAFGVHGIGGMLGAVLTGFFATSA VTGSELPPMMTQVGIQIFSVAATLIYGGIVSFVILFVIKKTMGLRVTKDEELTGLDLAIH GERIE >gi|319803661|gb|ADMF01000041.1| GENE 19 17137 - 17475 557 112 aa, chain - ## HITS:1 COG:PA5288 KEGG:ns NR:ns ## COG: PA5288 COG0347 # Protein_GI_number: 15600481 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Pseudomonas aeruginosa # 1 112 1 112 112 155 74.0 2e-38 MKLVTVIIKPFKLDDVREALSAAGVHGLTVTEVKGFGRQRGHTELYRGAEYVVDFLPKIR IDIAVTDDAVDTVIEAVLASARTGKVGDGKIFVSPLEHVVRIRTGEEDEGAI >gi|319803661|gb|ADMF01000041.1| GENE 20 18086 - 18439 345 117 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKHEEKKKDEDEGPKFDERGEPLVIFKRTCPAMNNADLAARASFFAAMRAMSDEDFKAGR GLTFQTMVREDPRYPARQIQFVFGIRPRTARTYAEMEAEAVEVINAAHKKFYAVGKR >gi|319803661|gb|ADMF01000041.1| GENE 21 18838 - 19578 394 246 aa, chain + ## HITS:1 COG:MA3459 KEGG:ns NR:ns ## COG: MA3459 COG0500 # Protein_GI_number: 20092272 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 4 223 3 231 249 122 32.0 6e-28 MTVLKKRITHYWSIRARAFADQRLRELDSPKARRWLEEIVPKLPESADNKPLRVLDVGAG TGFFTFLLSPLGHEVVGIDLTPAMIAKAKELARHLNISAEFFVMDAEAPSFAPGSFDAVI SRNLTWTLPNLERAYRAWAKLLLPGGVLINFDADYCREHCDELPKLHAHKDISPACWREY EAIKHELQPGQGVRPHWDAVLLRAAGFADIAFDHGVWQRIYSEIDEFFNPTPIFVLSARL PQETIP >gi|319803661|gb|ADMF01000041.1| GENE 22 19575 - 20378 768 267 aa, chain + ## HITS:1 COG:MA3459 KEGG:ns NR:ns ## COG: MA3459 COG0500 # Protein_GI_number: 20092272 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 12 258 8 249 249 146 32.0 5e-35 MMNEAVYAEANRTYWTHRAPSYGDVNRKELATAQRRIWTQTLDVRIQARFPDRARSSIRV LDVGTGPGFFAVILNALGYAVTAVDYTDAMLNEARLNAGEAAEHIHFHCMDAEKLGFADA SFDVVVSRNLTWNLPHPDRAYAEWARVLKPNGLLLNFDANWYRYLYDASAQAAHLEDRAN VYASGAEDDTLGTDVAAMEAIARRAVLSRRMRPAWDHALLRALSMCVTSNEDIWKEVWTE DERINNASTPMFLVQAVKTAAAEEGSR >gi|319803661|gb|ADMF01000041.1| GENE 23 20375 - 21319 1004 314 aa, chain + ## HITS:1 COG:FN1113 KEGG:ns NR:ns ## COG: FN1113 COG0601 # Protein_GI_number: 19704448 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 310 1 309 312 254 44.0 1e-67 MKHYVFSRLLQLIPILFVITFLSFAMMRLAGSDVVLQSMERTGMAASDAVVAAARAELGL DKPFLTQYFTWLGKLLHGDMGRSYVSGRPVFETFIAKLPATLLLTGVSVGLTLLVSLPLG IFSAVNQNRWGDWVIRSLSFVGNSIPNFFAALLLLYIFAIQLQWLPVISRQLTVESVILP ASTLALAMSAKYIRQVRATVLDELSKDYVLAARARGIPFAATLIFSVLRSSLVTIITLLM LSIGSLLGGTAIVESIFMWDGVGKLAVDAINMRDYPMIQAYVMWMAIIYVCVNLMTDLSY QWLDPRIRLGRGVS >gi|319803661|gb|ADMF01000041.1| GENE 24 21316 - 22173 806 285 aa, chain + ## HITS:1 COG:FN1522 KEGG:ns NR:ns ## COG: FN1522 COG1173 # Protein_GI_number: 19704854 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 29 281 19 272 276 226 45.0 5e-59 MTAQIIMPDAVQRRRKIRQRWGFYAIAALAALVCLTALFSEWIAPYDPNAQIFASLSPPS WEHWAGTDRYGRDLFSRILVGLRTSISATLSLVFIIMTTGTIVGMICGYRGGYVDTIMMR ISDVCLAFPGLVFALAIAALLNGGLINAVFALAAISWPKYARIARSQTLRLKDSDFLAAA KMSGATTAAQIWRHILPNAMGPILVTAMLDIGTMMMELAGLSFLGLGAQPPTAELGNMMS GGRSMLQTYPWVILAPGAAILFAVVAFNLLGDAVRDRLDPKNTQR >gi|319803661|gb|ADMF01000041.1| GENE 25 22255 - 23844 1707 529 aa, chain + ## HITS:1 COG:FN1523 KEGG:ns NR:ns ## COG: FN1523 COG0747 # Protein_GI_number: 19704855 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 6 519 4 519 526 258 31.0 1e-68 MMNLKLSNRPLTLLLSVCLAAGLAAGCSGEDKAKQAKTAAAPMTFVFGDTTFNPENEEPN VNPHFKYAGWAAMRYGVGETLFRYSNTMQIEPWLATSYELLDPLTWKLTLREGIAFSNGR PMTGAAVKACLEHLVKVHDRAQGDLMIDSILAEGQTVTIKTKRPNPTLLNYLSDPYGIIF DMEAGITDDGIVVGTGPYKVTKLVSGETIELVRNEKYWNGTPGFDQVKVLTISDGDTLTM ALQSGEIDGAYGIPYASYPIFQKGGYTFTSTPTSRTFFAHMNFKSPIVQDPAVRKAIAMG VDKERFVRDLLNGNGYVAKGAFPSTFAFGGDSVKAKPYNPDLARATLDAAGWVDSDGDGI RDKNGQPLRIRWLTYPSRQEQPLLAESAQANLKAIGIDVVINNTADHNSIRVRPELWDIY VSAMVTAPTGDPAYFFTTHALDRSAVNNGHYHSDKLEALARELNDTFDVKKRGELAVQMQ QTVLDDDAFIFFSHLKMSMITKDTVVGLTAHPTDFYEITAKLAPAPAKQ >gi|319803661|gb|ADMF01000041.1| GENE 26 23860 - 24663 310 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 9 262 278 526 563 124 31 1e-27 MSFHTDEAVLRYEHVDVSFEGCAVLHDISITLGRGEILAVVGESGCGKSTLLRAAAKLLG AGGLITRGHIWFNGKDLPTLSERALRPIRGASVGMIFQDASASLAPVRTVGEQVFEAVAA HERSTEREVRKRAFDLFRTLNFETPERLWESYPFELSGGMCQRVGIVMAMLLRPQVLLAD EPTSALDASVEVEVMRELLALRAQFGTAIMLVTHDMGVAARMADRLLVLKDGRMVEIGSA ADVLCHPQADYTRALIAATPRLRKNAE >gi|319803661|gb|ADMF01000041.1| GENE 27 24660 - 25463 219 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 228 1 221 223 89 28 4e-17 MIPVLSVRGLTKVFEIPKREPITAVSNVTFDLAAGTALGVVGDSGCGKSTLVRLIMRLMP STAGTILLKGHDITHLNERALREVYRTMQMVFQQPAASFDPRRTLGDGIGEPLRNQGCTR HEADRCAAQLLERCGLTADMAARYPHEVSGGQCQRAAIARALAVSPELLICDEATSALDV TVAGQIMTLLKDLRRESGLSVLFISHSLELIQSFCDEMLVMNRGSIVESGTPDAVIADPQ SECAKRLVAAAAAMSADFESLPSRCGT >gi|319803661|gb|ADMF01000041.1| GENE 28 25779 - 26135 330 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPEVIFGPRRNAAARKLAASQNTDKHPNWGGRRPGSGRKPAGERPLDAMIVVRMTDKQKA FFKMAGGSAWLRRVLEVCMERKQFNMASDRDPNEKELLGGLEIDDILPESLSSKSTGF >gi|319803661|gb|ADMF01000041.1| GENE 29 26395 - 27084 654 229 aa, chain + ## HITS:1 COG:STM1536 KEGG:ns NR:ns ## COG: STM1536 COG0680 # Protein_GI_number: 16764881 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Salmonella typhimurium LT2 # 19 216 3 199 202 161 43.0 9e-40 MKANVHPDLLPKGGSASRDVLILGIGNILWADEGFGPRAAEAFHQRYETPAGVDVMDGGT LGGWLLDEILSTRRMLVFDCCDFKEKPGTLKVLHKSDVKIWSSTKISPHQTGFNDLLASA AIMGYELEDLAVVGIQPELLDDYGGSLSPLIRSRLDEAVELGAKFLEEWGVKLTPRPAGT KAAPLSFSVLELNEYEAGRPDAKEACRFGDERFLVRTAGHAVENPEETK >gi|319803661|gb|ADMF01000041.1| GENE 30 27159 - 27494 346 111 aa, chain + ## HITS:1 COG:no KEGG:SeSA_A1639 NR:ns ## KEGG: SeSA_A1639 # Name: hypC # Def: hydrogenase assembly chaperone HypC/HupF # Organism: S.enterica_Schwarzengrund # Pathway: not_defined # 1 100 1 98 99 76 43.0 2e-13 MCIALPMKVLESGPMMVVCERNGRRLEVDCSMIDQPAVGAWLLVFQNRALREIEEAEAGE IEAALGATARVMAGDVDEETIRSGFGDLIDRGPELPEHLRALVGRAPGKPL >gi|319803661|gb|ADMF01000041.1| GENE 31 27535 - 28014 649 159 aa, chain + ## HITS:1 COG:no KEGG:Tint_3080 NR:ns ## KEGG: Tint_3080 # Name: not_defined # Def: hydrogenase-1 expression HyaE # Organism: T.intermedia # Pathway: not_defined # 16 150 4 136 136 69 32.0 4e-11 MAKYTRVSQIDPENHPLFNRLWTTEGFQRLTSESVEKFLDTPGLKIALFGDDPNNQKETL DILVIGAELKKAIEAALAPENGAWMSDVKEGRALAARWGMRKLPAVALFRGSIYLGACQG LKDWDEYLRELAEIAARTEAPKRTISILPAGGQADHHCG >gi|319803661|gb|ADMF01000041.1| GENE 32 28055 - 28948 824 297 aa, chain + ## HITS:1 COG:no KEGG:Xaut_2179 NR:ns ## KEGG: Xaut_2179 # Name: not_defined # Def: HupH hydrogenase expression protein # Organism: X.autotrophicus # Pathway: not_defined # 60 276 72 284 284 82 29.0 1e-14 MQTFTVEEAARRWLSAPKLDPETERAAAEATIAFLTDVRSKIEAHLEDIKAGRAPADGSG LQEVWDFSHFDPKHIDFLLATLGEGEVRIKLFGGEAKAGDTSVPGLWRVQSGRSGQENFF VLARLPRTVQVVGTRGLDKIPQLVNPSADVFAAPAILQELQYRLDAFDADAGVPDMPTDP CFMLELKRQPLSPGDMTALLSTLGQGDIDVELQGITRSHIQNTKVRNLWRTRIINNAGKT LLDAYVIAKVPPEIPISAEEFADGAAKCTDLIEWVRHDLQRGTLGGGEIKAEEVLNV >gi|319803661|gb|ADMF01000041.1| GENE 33 28941 - 29264 369 107 aa, chain + ## HITS:1 COG:MTH155 KEGG:ns NR:ns ## COG: MTH155 COG1773 # Protein_GI_number: 15678183 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Methanothermobacter thermautotrophicus # 26 84 5 63 63 58 47.0 2e-09 MSEEDTGAPHFATGAEVEALLDKYARDRVGAHTRMQCKVCWYVYNPDEGCPEEAIDPGTP FLDLPDDFVCPDCGHPKTAFLPLDDDQADPSDPSGPAQGWSDRWEHG >gi|319803661|gb|ADMF01000041.1| GENE 34 29261 - 29728 368 155 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRSVTFSLVVLTVFLWAASLWRLSARVTGMDLVYAGIPAGLALLLLIGFAVSGRIFNPN DNVRRVFSAVLAVTLLLTIGLVYADIFVFSGEIFERGLAIWRLDIFYQERFAYTLAFAGG IVHPILFIIAGVGLLCLPPRRTASRCAEPKASAKI >gi|319803661|gb|ADMF01000041.1| GENE 35 30470 - 32635 1566 721 aa, chain - ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 293 721 223 638 638 112 26.0 4e-24 MTNYLYKVLPPQYSHVNKVYCLLVATVFCALPLCSTEAAAENILKYDGTTDIHGDAKTRA SKNEYDGIDIRITGVDPGYYTETTEALVVDGKTLNVKGKGKFVRIVNTAQNERIDNNGGI YAKGGSTVNFTDVDSIYIAAIAGKEGGNDSTVISAKDPIWKDRTGYTNTINISGTVIQLI GSIDVFHSFGSVLNPNARHTVNAALSGSDSFWYGSAIGESDERTAVNLSLADGATWIFNA GRPLLNAGGIISNLKLDKGVVLFADAEVWETYRKTVIKGTDYVLANFRDHNERYSQIEIR NLTGPGGIFKIDLDWQTNNGERQYTEKSDFITIGTAEDGSHQIVEFDMGKAHLDEMKNGD KLYFASVESGNTTFSTNADGEVNRADELYRFALHTQSEEDETDQLTYWFLTKSIGSANEN VDFLNNAVLASFSLASDLDRFHERQGEARHEERGTNGLWARYRYSDIGRKHAFDMDKSMI QVGYNKEVSTADSHKIVSLAFDYTRADTDLFGVSGSGSSDRYGLNLYYTVLGESGSYADF NAKIGRLGSDYNLRNDSGQKIGGSLWQTFYGVSAELGWKFELNDFLFIEPQTQLQVIRIE GTRFETESGIKAQIADTNSIIGRVGFRAGSSFSFGSAERISTAYIYGDVLREFKGDHVFA ARGHSTSVDFSYADKETWYDAGIGANLSLSSNTDLWLNAKYIFGGYFESSRQINAGVRFS F >gi|319803661|gb|ADMF01000041.1| GENE 36 33420 - 35060 912 546 aa, chain - ## HITS:1 COG:YPO2796 KEGG:ns NR:ns ## COG: YPO2796 COG3468 # Protein_GI_number: 16122995 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Yersinia pestis # 119 534 222 626 638 89 23.0 1e-17 MGNKVSVSGDTVRLIGSLDVTGLGNQIEVSMSGKDSFWYGSKCGGSLSEVAISLANQATW IFNASGSKYNQNGQLDNLSLDGGIVVIANEIVWQTYENTIIKDSTGNEYVLSDYRNRDGK YSEVDISNLTGPGGIFKIDLDWQTNQGAKQYTEKSDFIKIGKAEDNSSQTVWFDISKAHL DEMKDGDKLYFASVGSGDTTFSTNADGEVSSADEIYSFKYSSQSEESDNLTYWFLTKSQG GTNENVALLRNAALASYSLASDLDRFHERRDEARYEEAGAGGLWARYRYSDIGRDNTFDM DKNMIQVGYDKEVSTADSRKIVGIAFDYTHADTDLTGISGSGSNDRYALNLYYSVLADCG GYADFTAKIGRLGSDYDLRNQTGQKIGSSFWQTFYGVSAEFGWRYALNDTFFIEPQTQLQ IIRIEGDQFETDGGIKAQIADTNSVIGRIGLRAGSTFTLGSAEQKSSAYVFADALREFKG DYAFAAAGHSTAGDFTYSGKESWYDAGIGTNVALSSNINFRLNAKYIFGGVFESSRQIDA AIHFAF >gi|319803661|gb|ADMF01000041.1| GENE 37 36200 - 37027 968 275 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLEWLDRYMAKFAQTDHIRREEHARRQEEASPAHEEAVALLEAFPYSGPGRARVIAAALS AITQETLLDAAYARRLLRAMVEGFSQADADVQTTLAPAQVALNLLPTLRAAATAGGSVGA PFALIEGTLAMRTGQFDVAIKRLGDANRELRASLVEDWSELLPSSLDGDMLPAAVELAAD TLSQLENPDLRFWTRVLLTVPGDQLGVPHPDELLLAAGELALNLHRTAGLVNKPEPEERR QLLESADKHYRSLFNGLHPQAAGCRRLLGRIDQGE >gi|319803661|gb|ADMF01000041.1| GENE 38 37152 - 39209 1966 685 aa, chain - ## HITS:1 COG:XF0375 KEGG:ns NR:ns ## COG: XF0375 COG2194 # Protein_GI_number: 15836977 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Xylella fastidiosa 9a5c # 228 683 97 546 552 311 38.0 2e-84 MGAALLCVGLLWWLKQSTGVSCPWSVTEFGGSAAVVDPGLPLLPKPGRCWPSGAAGSGFC LLPLYFAFRDFRPRLARLLLALALLSGFGAGFARVVVGAHFPSHVFAALALDWLISAGLY IAAFDRAGLVRKLRALLPFGRRSTEDQPGRVTLYLFTSLWWAIVFNGPMTAKLAIDNNLV TTDSLILSLGTTAAFAFVSAAIIELCGLLPKMVFRILLLILNTLGAAAFAAAYLYGTAMT PDMVRNFLATDPAEAQAYLSTRSVLLFLAAWLPPMLVTLAANLKRSACVARPTLLRRLLV FLRRLFTSIGFAAVGVALIGLNFQAFAGAMRNDKSLRYMIAPVNVVYSGMRTIVGDSSPE TNAPRVAVDPSPSLAVKPSRPAVLVVMVGETTRSASWQLAGYSRETNPQLSELQIISIPR VEACGTSTDVSLPCMMSRIGRSDYNRDRILSEEQLPSLLNRAGANVLWIDNQSGCKGACT GVSSRATTPNPQDCPNGECGDRVFLSELKGELGKLPADRPTVLFLHMMGSHGPAYSLRSD KARKLFEPECTDADLKSCSRESVMNAYDNSVRETDYVLASLIRMLKDTSGSIDSALVYVS DHGESLGEGGLYLHGAPYWMAPKEQTEVPMVLWMNSGFEKTFSINRSKLEKNAAGRVTHE NLYHTVLGLLNVKSTTYVPTYDLTH >gi|319803661|gb|ADMF01000041.1| GENE 39 39243 - 39677 332 144 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 9 137 438 564 570 102 39.0 6e-21 NLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYRFVL QSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRNRVA QYRWSTETTARDQMFLELFFDESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:31:21 2011 Seq name: gi|319803637|gb|ADMF01000042.1| Sutterella wadsworthensis 3_1_45B cont1.42, whole genome shotgun sequence Length of sequence - 25465 bp Number of predicted genes - 20, with homology - 18 Number of transcription units - 13, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 394 256 ## - Prom 414 - 473 6.1 + Prom 661 - 720 3.9 2 2 Tu 1 . + CDS 744 - 1853 1273 ## COG0371 Glycerol dehydrogenase and related enzymes + Term 1928 - 1969 8.0 - Term 1908 - 1964 12.6 3 3 Tu 1 . - CDS 1979 - 3190 909 ## COG0116 Predicted N6-adenine-specific DNA methylase - Prom 3216 - 3275 1.9 + Prom 3480 - 3539 2.1 4 4 Tu 1 . + CDS 3670 - 5010 1811 ## COG1114 Branched-chain amino acid permeases + Term 5043 - 5078 7.2 5 5 Tu 1 1/0.167 - CDS 5150 - 6427 1081 ## COG0014 Gamma-glutamyl phosphate reductase 6 6 Op 1 12/0.000 - CDS 6589 - 7596 962 ## COG1466 DNA polymerase III, delta subunit 7 6 Op 2 9/0.000 - CDS 7606 - 8130 558 ## COG2980 Rare lipoprotein B - Prom 8182 - 8241 3.9 - Term 8255 - 8302 13.2 8 6 Op 3 . - CDS 8340 - 10979 3146 ## COG0495 Leucyl-tRNA synthetase - Prom 11027 - 11086 5.6 + Prom 11111 - 11170 2.3 9 7 Tu 1 . + CDS 11294 - 13744 1719 ## COG0210 Superfamily I DNA and RNA helicases + TRNA 13832 - 13907 69.3 # Arg CCT 0 0 - Term 14163 - 14214 11.1 10 8 Op 1 . - CDS 14231 - 15562 864 ## COG2079 Uncharacterized protein involved in propionate catabolism - Term 15573 - 15613 1.3 11 8 Op 2 . - CDS 15642 - 17045 1741 ## COG3069 C4-dicarboxylate transporter 12 8 Op 3 . - CDS 17130 - 18320 1553 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 18423 - 18482 5.7 13 9 Tu 1 . - CDS 18559 - 18675 59 ## - Prom 18736 - 18795 1.6 + Prom 18718 - 18777 2.5 14 10 Tu 1 . + CDS 18820 - 19596 207 ## Cphy_1523 hypothetical protein + Prom 19677 - 19736 5.9 15 11 Tu 1 . + CDS 19772 - 20737 405 ## COG0583 Transcriptional regulator - Term 20732 - 20766 4.4 16 12 Op 1 . - CDS 20784 - 21245 474 ## COG0251 Putative translation initiation inhibitor, yjgF family 17 12 Op 2 . - CDS 21281 - 22348 737 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase - Prom 22415 - 22474 3.1 - Term 22530 - 22571 10.2 18 13 Op 1 . - CDS 22625 - 23791 1508 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 19 13 Op 2 . - CDS 23878 - 24990 1315 ## COG3069 C4-dicarboxylate transporter 20 13 Op 3 . - CDS 25016 - 25459 226 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein Predicted protein(s) >gi|319803637|gb|ADMF01000042.1| GENE 1 1 - 394 256 131 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEKLLSVS QYLVSTGETVH >gi|319803637|gb|ADMF01000042.1| GENE 2 744 - 1853 1273 369 aa, chain + ## HITS:1 COG:ECs4874 KEGG:ns NR:ns ## COG: ECs4874 COG0371 # Protein_GI_number: 15834128 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli O157:H7 # 12 365 24 376 380 144 27.0 3e-34 MPKNYTVTLPHYSVGPSCYDELGQVTRFYGRTAAVVGGETALAKAGPALKAGFEKAGVKL TEWSVYGKDSTNANVEKIVNNPKVQEADLLFGVGGGRAIDTVKTAADILGKPFFSVPTVS SNCAPVSAIAVIYKDDGALDHYHFPKRCPEHCFIDTTVILDSPEELFWAGIGDALSKQAE SQLASRGAELTHTPLLGVQVGLVCEDPLLEYGKQAIEDFRAKRDSHAFTETVLDIIVSTG ITSNLTTTKDSYYYNSSLAHCFYNASMVLPSIHKHLHGEVVSFGTLVLHAVDEDDVALER LMTFNHSVGLPVTLAQLDITTPEQVNALVDRAATMKEWTCVPYEMTKDKFRNGIYKVDEL GRKLVAKQS >gi|319803637|gb|ADMF01000042.1| GENE 3 1979 - 3190 909 403 aa, chain - ## HITS:1 COG:NMB0455 KEGG:ns NR:ns ## COG: NMB0455 COG0116 # Protein_GI_number: 15676366 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Neisseria meningitidis MC58 # 4 390 5 380 380 306 44.0 4e-83 MPSFIFHAPCPFGLEGLLADEIRALNADPDLIRSAKGGVSFAGGLELGMAVCLHSRFATR VLLRVAFDEYWDSRDVYALAKKTPWEKWFGTDATFRIHSSANRCPLESLDFATLRIKDGL CDRFTELAGRRPSVEKRSPDVRIEAYFTFDHVSFYIDLAGESLFKRGWRLEHGEAPLKEN LAAALLALSGWKPELPLVDPFCGSGTIAIEAAAMATNTAPGLMRRFAFERLQGFDMALWQ EMKEDARAAQNRSAKVFIRASDISTIVVEKAEENCRRAGFGALLDDGRIVFHQGDARSIK APEGAEGGLVIANPPYGEQSNPKSASIAAMMADFAAALKSQFPGWTAWLLTSDRLLPRQM RLKESRKIVLFNGPLECRFFRFDMVAGSNRRKTGESLSQAQNG >gi|319803637|gb|ADMF01000042.1| GENE 4 3670 - 5010 1811 446 aa, chain + ## HITS:1 COG:BS_brnQ KEGG:ns NR:ns ## COG: BS_brnQ COG1114 # Protein_GI_number: 16079722 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 5 435 6 434 440 317 43.0 2e-86 MEQPSSKRFIAIGSMLFALFFGAGNLIFPAAMGQSAGANVWWAVLGFCVTGVGLPLLGII AVGYSGCRDLREVASRVHPLYGLFYTVVCYMAIGPCFAIPRTGTVSFEIAVRPFLGADPS AFALPIFLAFFLGISCWLAASPSKLVDRIGKFLTPALLVTLAVMIVMSFATPMGDFQAPG KAYDEPIKAAFQGVLDGYNTLDAIAALVFATLIVNSVKEIGFTDPKAISSQVMKSGMLAG LLLALVYIFIAKIGAESVAAIGMQDTGAPVLAESAKVFFGSFGAYLLAAIVLLACITTAV GLLTCCAAFFMQLTGKFTYVQWVIGFTVISYLIGLFGLKTIIVSTIPVLMFIYPLCVALI ALIFLHKFFGGRQCVYAWTMGFTFVMALVNGAETAGISMTGLEEVLKAYVPLHTYGMGWI PFAIVGFVIGLIWKVAVPAKAQNAAA >gi|319803637|gb|ADMF01000042.1| GENE 5 5150 - 6427 1081 425 aa, chain - ## HITS:1 COG:RSc2741 KEGG:ns NR:ns ## COG: RSc2741 COG0014 # Protein_GI_number: 17547460 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Ralstonia solanacearum # 1 425 1 426 426 452 58.0 1e-127 MPETSARELIHEIGTAARRASRITACASTEKKNAALERIAQALMTRRDVIQAANAVDLAN ARSEGLSAAFVDRLAVTDRVLDQMVTGVRQIAELADPVGGIENLRPMPSGIRVGRMRVPL GVIAMIYESRPNVTIDAAALAIKSGNAVILRGGHEAIETNRALAAVVSEALADAALPADA VQLIPTTDRAAVGELIRARDYVDVLIPRGGKGLISRLMAEATVPMIKHLNGICHTYVDAG ADLEMALSVVDNAKTQRPSPCNATETLLVHRDEAESFLPMIGKLWTEKNVEMRCDPQALA ILLRAGVPAVPATEEDWDTEYNALIISIAVVESLDAAIDFIDLHSSRHTDAIITRSLDSA DRFLREVDSSSVMVNASTRFADGFEYGLGAEIGISTDRLHARGPVGLEGLTSLKYIVLGH GEGRS >gi|319803637|gb|ADMF01000042.1| GENE 6 6589 - 7596 962 335 aa, chain - ## HITS:1 COG:NMB0708 KEGG:ns NR:ns ## COG: NMB0708 COG1466 # Protein_GI_number: 15676606 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Neisseria meningitidis MC58 # 18 332 14 331 332 184 36.0 2e-46 MALNAGSLAADLANRRELAPFWLVTGSEDLLMLESADLLRRRARELGYTDRQVLELSASA DWSQLPDAAASIGMFDDKKFLEVRLPSGRPGIKGNKALPEFVERPVDGVVTLFTMPRPDW QGQKAAWWQALVKAATVVECDPVERAQLPQWLAGRMRANGQTAARDVLEAFADLVEGNLL AAKQEVGKLSLLFPQGELTLEQIEASVGNCSRYTTEALVESFCTASADRTARIVDGLEAQ GEPLPFLLAILTNQIRSLIKLRASFETSGNLYVKGVFATNAMKAAARRIPLKRLAAALDV CADIDRLSKGLSVRERDGDPWIELKSVCLFLARTR >gi|319803637|gb|ADMF01000042.1| GENE 7 7606 - 8130 558 174 aa, chain - ## HITS:1 COG:RSc2743 KEGG:ns NR:ns ## COG: RSc2743 COG2980 # Protein_GI_number: 17547462 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rare lipoprotein B # Organism: Ralstonia solanacearum # 25 170 24 169 169 108 36.0 7e-24 MQHLSRRSVFALLGSLAGSVVLSGCGFRLRGQFSAPFETLYLQMPENTRFSGLLKRVIES GSDVRVVSSPKEADAILELLSVNRSRDILSINDAGRAREYELTMTLEFRVVSPDGFDFVE TTRLATSRDLTYSESEFLSREGEEKVLYDDMENDLISQIVQLLGAAKGPSTDTP >gi|319803637|gb|ADMF01000042.1| GENE 8 8340 - 10979 3146 879 aa, chain - ## HITS:1 COG:RSc2744 KEGG:ns NR:ns ## COG: RSc2744 COG0495 # Protein_GI_number: 17547463 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Ralstonia solanacearum # 1 878 1 877 877 1128 62.0 0 MRETYSPQEVESEVQAMWKDKDVYRAKEDAVDANGHPKPKFYVCSMLPYPSGKLHMGHVR NYTLNDVMYRFHRMKGYNVMTPMGWDAFGLPAENAALAKKVQPAAWTYSNIADMKAQMEP LGLAFDWSREVATCKPEYYRWNQWLFLKMLEKGIAYRKTQIVNWDPVDKTVLANEQVIEG RGWRSGAIVEKREIPGYYLGITQYAQELLDDIKTLDGWPEQVRRMQEHWIGRSEGVTLCF PYELAGEKKRLSVYTTRADTLMGVTFVAIAAEHPLASYLAKNRPDLQAFIAECAKGGVSE ADMAAMEKKGVPTGFYVEHPLTGEPVEVWIANYVLMGYGEGAVMAVPAHDERDFAFAKKF GLPIKQVVAVDGETFSTDAWQEWYGDKARETHLVNSGEFDGLSMHDAIDAIAAKLASKGL GQKEVKFRLRDWGISRQRYWGTPIPMINCPHCGPVPVPEKDLPVVLPEDLVPDGSGNPLT KCDAWKNVKCPKCGADAERETDTMDTFVDSSWYFQRYCSPDCTTAMVDKRADYWMPMDQY IGGIEHAVLHLLYARFWTKVMRDFGLVKYNEPFKNLFTQGMLMAECYYRDMPDGHRRWYY PDEVEVQFDDKARPVGAISKEDGEPVVLGGIEKMSKSKCNVVEPRDIINKFGADTARSFV MFAGPPDQSAAWSNSGAEGTFRFLRRIWNWAYAHQTDLNNAAEASTSEGFSHEARHLRRE IHSCLKQADYDYSRMQYNTVVSACMKMFNAIDGFKGTESEGGKAALKEAASILLRTLYPI APHITTALWKELGFIAIEGDLIDAKWPEVSEDAIKADELTLVCQVNGKLRGSITVSAEAS EDEIRAAALSNPDVKKFVGDLPVRRVIIVKQKLVNVVAK >gi|319803637|gb|ADMF01000042.1| GENE 9 11294 - 13744 1719 816 aa, chain + ## HITS:1 COG:RSc2235 KEGG:ns NR:ns ## COG: RSc2235 COG0210 # Protein_GI_number: 17546954 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Ralstonia solanacearum # 3 809 37 824 829 687 47.0 0 MSSDILANLNPEQHRAVTAPEESVLILAGAGSGKTRVLTTRIAWLLEHNLATTGEILAVT FTNKAAKEMLTRLEGMIPYDLRRMWVGTFHGLCNRILRIHAQEAGLPKTFQILDSGDQLS LVKRLMKAANIDVEKTDPKQVVNFINWCKENGLRSSGVSAKDASDLRLGLYQAYERECQK QGVVDFAELLLRCYELLTRNDLVRAHYQKRFRHILVDEFQDTNVLQYRWLKILAGEKLGP NGTSLNAVFAVGDDDQSIYAFRGANIGNMADFLKDFHVEKPIKLEQNYRSTKTVLDAANA LIANNDGRLGKNLWTSGSQGAKILVKELESEMDEAAWVVDSIRRAQRLTGGDASWRQFAI LYRTNAQSRALEAELTARGVPYRIYGGLRFFERAEVKNLLGYLRMITNPWDDTSFLRVVN FPTRGIGAKTIETLQESARASGQSLWATLIQMGDQLSGRLAAFRDLIFTLRETAQNMTLP DAVAHVIKASGLEACYEKDKDGPDRLENMKEVITAAEGWFKNERLPEDLLAFSPANDEVP TPMEGFLTQATLEAGDKSEGQNVNAVQLMTVHSAKGLEFPWVFIVGAEEGIFPHFSAVKT VSEGGQGGLEEERRLMYVAITRAKERLVFTHCKVRRTYGTIFNNPLSSFVKEIPAELVQM EPLFDDDEDDDSDRQGGHFYGRDRDDSYGSGARWGGSSSGYSGGYGRSGQGYSGYSSGRS SGSSYGSNRVSDAVVSESGRRSFAGAGASLAAAQQRRAEDDCGYKPGDRVRHDVFGAGTV KAVIGSGSTTVLRITFGSSTKDLLLRVAKEKLHHAG >gi|319803637|gb|ADMF01000042.1| GENE 10 14231 - 15562 864 443 aa, chain - ## HITS:1 COG:PA0881 KEGG:ns NR:ns ## COG: PA0881 COG2079 # Protein_GI_number: 15596078 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Pseudomonas aeruginosa # 1 439 1 450 450 178 28.0 2e-44 MQEHIQNELASFIANCDWEKIAPHFKEDAAYRVLDWVGCAVAGEHYPQVEIAQKYFIENG DQGNSTVIGHQIKCSPRTAAFLNGIAGHVCELDDGHRTAIGHPGSIAVPTALALGEHLNA SGADVLKAVILGYEVFSRLGRTVNPSHYRTWHTTGTCGTIAAAAAAASLLKLSAEETNNA IGIAATMAGGLVESFGSHAKAINIAEACQNGIDAASLAKLGLTGSHSALLGKKGFVAATC TEPHTENLTHLSEDALVSDSAFYKVYSSCGHTNSPLDVLFKLMAKYAINPKEIERIDVAT YKVAFDLTSQLKTATEDEAKFSLPFCFAISLLKGSVSLANFSQAVRTDAEVLDLARRVHV IESPEATSRFPHRQAEVSIVMKDGTVYADKTLDAHDSTTPEQIVAKFEAAVNEMDASKRQ HIIQFVIDLGKQKSIAPLMDLLA >gi|319803637|gb|ADMF01000042.1| GENE 11 15642 - 17045 1741 467 aa, chain - ## HITS:1 COG:PM0933 KEGG:ns NR:ns ## COG: PM0933 COG3069 # Protein_GI_number: 15602798 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 8 464 6 460 462 307 42.0 4e-83 MGAIANTIAIVVIVCVGYLIIKKVYPTAVLMIAGLVLLCCAVLLDVEPGLALKKGTGSEF FDIFKIIQDVFSTTLGGLGLNIMCMGGFAKYMDKLEAGRSLYDVVSAPLKYVKNPYMLAM AGFIVDQLLGMAIPSASGLGLLMMVTMYPVFIRAGVPRMTAVCVIAAGRFFDLGPGSASC NMACKTAGIEWADYFLNWQMGIYWALLPTMLVTMYFAQKYWDKREGLDPDFEALREKFRQ EEADDTNKAPKIYALLTVLPLFLLLTFNPIVTEYFGLPTIKLGIPAAVIITIFVSMIFEY IRKREFVEVMASMKVFFEGMGKYFAVVVTLIVAGQVFGKGLTAIGAVNALIAGAESMGLG VMSLIIVMGVIIGIIAFLMGSGNAPFYSFASIAPAIAEKFGVHAADVLLPLQTMTGFGRT MSPVTGGIVAVAGMAGVSPFRVVKRNMVPLLCCCVVNFLVVYLFILP >gi|319803637|gb|ADMF01000042.1| GENE 12 17130 - 18320 1553 396 aa, chain - ## HITS:1 COG:STM3833 KEGG:ns NR:ns ## COG: STM3833 COG4948 # Protein_GI_number: 16767118 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Salmonella typhimurium LT2 # 1 396 2 397 397 561 66.0 1e-160 MKIVSVDIIDVKNPLQSAVAKWRPVVVRINTDEGVSGFGEVGMAYGVGASAGFGMAKDLA RLLIGEDPMRSEYIWDKMQKKTFWGQGGGTVVSAGMSAIDIALWDIKGKVLGVPCYQLFG GKCRDELRTYASQLQFGWGNAEKKEILTTPEQYAKAAEQALADGYDAIKVDVNEIDLEGR AKKRNLYGCFARHDLLVGYERLKAIREAVGDKIDIIVEAHALTDTTSAIEFGNMIEEFRI AAYEEPVMALNPGQLKQVKDGINIPIAAGERVYTRWGFRPFFEDHIIDLIQPDLGTCGGF SEAKKICDMGHIYDTTCQIHVCGGPIMTAAALQLECAIPNFAIHELHRYALLEGNRVTCK YDYLPVNGKYQIPDLPGIGQELTDKSIAESPKETVK >gi|319803637|gb|ADMF01000042.1| GENE 13 18559 - 18675 59 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAEKIIRKTVVLNILWRQKGRFLFLSLSFPFYGFDLK >gi|319803637|gb|ADMF01000042.1| GENE 14 18820 - 19596 207 258 aa, chain + ## HITS:1 COG:no KEGG:Cphy_1523 NR:ns ## KEGG: Cphy_1523 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 2 230 112 346 353 127 34.0 5e-28 MYVNCMCKELSVRQSAEICGITVPTAFAWRHKILNALRNTCEHQMLSGTVELDRTFFNLS FKGSRHASEFKHLIEKYDKDKESLQQVCVPLAVGREGGFTGKVSTLGWSSTDTILSAIKD HLTSQSKLLADAEISKNNQHGKVLRNVNLTTVKGINEDRSLDAVRKFKQGINDSINLKFR GVATKYINDYILWYGFLHLSKQKPKECEKLLYDIALYSICSVNTRSVGKRMLPIELSSGQ KMLLSEFLDGLAENTMND >gi|319803637|gb|ADMF01000042.1| GENE 15 19772 - 20737 405 321 aa, chain + ## HITS:1 COG:RSp0910 KEGG:ns NR:ns ## COG: RSp0910 COG0583 # Protein_GI_number: 17549131 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 7 264 6 260 309 105 29.0 8e-23 MLNDLEALEVFASLCTTGSIQKTAQALGIDSPTASRKLTKLETQLGRQLINREKRPFEMT ADACAIIGSVKKILEERQQIETYYRRLQSDDSMLIRVMIGNAHINFAPKFILEYAEQFPK LRFNMLSPSDVPSFLEGKADVICLSAQAQLSNCIMLPRGRMIFVPVATPQYLKEHGPINH PDDLLHHRVFSNLYPNSFSLNSNYQLTKKGQSCSFQAIDTIRYSNVEMTRRSVLEHAGIA PCMPLFFVIDDLEAGRLVPVLGGWHRPSHQNYVVCKDDDWKIRQIRMFSNWWAQKLGDYE KECEARLIKLFGRKFFLNLIH >gi|319803637|gb|ADMF01000042.1| GENE 16 20784 - 21245 474 153 aa, chain - ## HITS:1 COG:ML2304 KEGG:ns NR:ns ## COG: ML2304 COG0251 # Protein_GI_number: 15828236 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Mycobacterium leprae # 1 152 24 174 174 114 44.0 5e-26 MHIEAKLRELGLELPEVKKPAGLYVFTKRVGNLVYVSGQTPDIGSILQYKGVVGEDMSIE TAQQAAQLAALNILAVLKLDLGDLDRIRQIVQVVGYVRCAKGFEDQPKVINGASQVFKDL WGEAGIAARLALGANELPEGSPVEIMAVVELAH >gi|319803637|gb|ADMF01000042.1| GENE 17 21281 - 22348 737 355 aa, chain - ## HITS:1 COG:TM0225 KEGG:ns NR:ns ## COG: TM0225 COG2515 # Protein_GI_number: 15642998 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Thermotoga maritima # 17 343 2 307 312 200 37.0 4e-51 MATYAQIARAHLGNLGKVSLGFYPTPFHKLESISSAYDVNLWIKREDFSGSTLFGGNKIR KLEYLLHDAKQQGCDTVFTYGATQSNHVMETATAARRCGMRPVVYLGAIVEPQPNDVRAN LLLDTILGAEIHILPSCGRSTKETMEANDHLFQAHIAQLAAQGHKVYNIPIGGSTPIGAA GFAECYIETMEQCESAGLACDYLVTATGSGGTLAGLAAGAAMLHDDSTQLIGIQVGKKDP ATYGQKIVELANSVLETAGAQERIDKLPFVIHSEYVGPGYEKPYKEANDDIRYLARTEGI FTDPVYSGKAFHGLMDLIRTGSIPKGSNVVFPHTGGATALFSEPDIIGDLNQIQA >gi|319803637|gb|ADMF01000042.1| GENE 18 22625 - 23791 1508 388 aa, chain - ## HITS:1 COG:Cj1393 KEGG:ns NR:ns ## COG: Cj1393 COG0626 # Protein_GI_number: 15792713 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Campylobacter jejuni # 41 385 2 346 348 587 79.0 1e-167 MGVNTILTHSGRGDQSVEVRSVNPVVMRASTILFKDYDTWQKYRKLRATDRVLSYGARGT TTNFELEKLVCELEGGYRAQLFPTGLAALAMVLLNYAEAGAHFIVSDAIYGPVRTVCNLF LSKVKVDVTFCKADCSDVESLIQPNTKLILVESPGSILYEVIDLPKLCKIAHAHNIPVAI DNTYSSGYLYNPLKLGADISVIAATKYLSGHSDVTMGIVICNEKEWKNFDKLPEALGFTT SPDDCYLVLRGMRTLAVRMNQIEKNTDEVVAYLQTRPEIKTIFYPKLPTHPNHDIFMRDY KGASGMLTIEFADGYTKEDAVKFTDALKYFACGASWGGYESLATVTVPPRTATDWSKRGP FVRFHIGLEDAQDLIEDLGQALDKISHE >gi|319803637|gb|ADMF01000042.1| GENE 19 23878 - 24990 1315 370 aa, chain - ## HITS:1 COG:PM0933 KEGG:ns NR:ns ## COG: PM0933 COG3069 # Protein_GI_number: 15602798 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 1 370 90 462 462 254 43.0 2e-67 MEHVGASAALFSVFEKPLKLIKSPYVLLGASFLVSQIMVIFVPSHAGLALLLMVTLYPIL IRSGVSPMSALGVIGCAQFVDVGPGSGNAILAAQTAGVDVSEYFVYYQLPLFVGVVIILT FVHMFVQRWWDKREGWVFDPNNIQTLAGTKNTEQDKKVPKIYAILPIIPLFLIIFFSKVA GSHIRMDVVTAMVISTVIAIIFELIRLRNFRDVLASFKLFFEGMGKILVSVVSLIVCGEF FAAGLIKSGFMGTLITAANDAGFGLATMVIVGGALVWLFSFIMGSGNAAFFSFAPLLPNV AHVIGVPIIQLIFPLQVILGFGRASSPITGAIVAISGLAGVSPFQVAKRTFIPMLFGTAI TYIAYFLFWY >gi|319803637|gb|ADMF01000042.1| GENE 20 25016 - 25459 226 147 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 1 147 436 584 584 103 37.0 5e-21 MRNAAAVADACRYMGNFVIRTNVVQDPFIALSIYRARNIVEQSFQQFKNQTAGDRLYATS STYMGKLFVQILAQSLRLMMRMACRRNETATNRLPSNSLTKAFMQLRYLKANKPTDRNAW KTKEIPKKIRDLFTLLGLPLPPRVFRD Prediction of potential genes in microbial genomes Time: Sun May 29 20:31:45 2011 Seq name: gi|319803623|gb|ADMF01000043.1| Sutterella wadsworthensis 3_1_45B cont1.43, whole genome shotgun sequence Length of sequence - 12121 bp Number of predicted genes - 14, with homology - 13 Number of transcription units - 5, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 327 198 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein - Prom 351 - 410 8.2 2 1 Op 2 . - CDS 412 - 750 284 ## COG3069 C4-dicarboxylate transporter 3 1 Op 3 . - CDS 771 - 1151 432 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 1280 - 1339 5.5 4 2 Tu 1 . + CDS 1167 - 1388 106 ## + Term 1504 - 1546 1.8 5 3 Tu 1 . + CDS 1791 - 2492 242 ## COG2964 Uncharacterized protein conserved in bacteria + Term 2521 - 2563 0.5 6 4 Op 1 . - CDS 2864 - 3445 241 ## gi|302859987|gb|EFL83064.1| putative lipoprotein 7 4 Op 2 . - CDS 3468 - 4691 487 ## COG1906 Uncharacterized conserved protein 8 4 Op 3 1/0.000 - CDS 4778 - 6322 660 ## COG2721 Altronate dehydratase 9 4 Op 4 . - CDS 6354 - 7052 371 ## COG2186 Transcriptional regulators 10 4 Op 5 . - CDS 7139 - 8527 1424 ## COG0471 Di- and tricarboxylate transporters 11 4 Op 6 . - CDS 8606 - 9982 1250 ## COG2079 Uncharacterized protein involved in propionate catabolism - Term 9989 - 10034 8.1 12 5 Op 1 11/0.000 - CDS 10083 - 10676 695 ## COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 13 5 Op 2 . - CDS 10679 - 11596 211 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 14 5 Op 3 . - CDS 11655 - 12119 336 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319803623|gb|ADMF01000043.1| GENE 1 3 - 327 198 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 18 106 21 109 584 92 49.0 1e-17 MSSSPKPWSFSTYTDADGRTYVYGYRNRWDPEKKQSRIEKRCHVGRLDPQTGQVHLGRKF LTNNPEYAGKFWLYDNNQLIEQEPFEQPDTDNEPQPSWRGEDVELGLT >gi|319803623|gb|ADMF01000043.1| GENE 2 412 - 750 284 112 aa, chain - ## HITS:1 COG:PM0933 KEGG:ns NR:ns ## COG: PM0933 COG3069 # Protein_GI_number: 15602798 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 1 90 1 90 462 75 43.0 3e-14 MFAIIIGLIVIALVVTLLLKGYYPQAILFMGGVLLLTCTAIFGWGDLLNAKQTTNFIGFD IFKVFSTGFSSRIAGLGLTLMAIGGFSRYIPNSRRLAPGGPDLTQSRPIYSS >gi|319803623|gb|ADMF01000043.1| GENE 3 771 - 1151 432 126 aa, chain - ## HITS:1 COG:tdcF KEGG:ns NR:ns ## COG: tdcF COG0251 # Protein_GI_number: 16131006 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Escherichia coli K12 # 3 126 23 148 150 133 53.0 7e-32 MDKEILSTNKAPAAIGPYSQGIAAGSFVFVSGQLPICAATGEMPEDIKAQAEMSLLNVKA VLEAAGSSLDKVVKTTCFLADINDFAAFNEVYARMMPKTGAPSRSAVGIAALPKGAKVEI EAIAIR >gi|319803623|gb|ADMF01000043.1| GENE 4 1167 - 1388 106 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVALNLYVTFRGCRQLRSQQVEFAAQTGISNVSQTLTSKLSLSKEVESINTFIEGLVLIW GASRLTLKLYVTA >gi|319803623|gb|ADMF01000043.1| GENE 5 1791 - 2492 242 233 aa, chain + ## HITS:1 COG:VC0355 KEGG:ns NR:ns ## COG: VC0355 COG2964 # Protein_GI_number: 15640382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 1 233 15 236 240 148 36.0 9e-36 MKSSSVYLLTAQDCALLDRYKLIVDAIGQVFGNSCECVLHSLADLEHSVIHIHNGMKTGR VLGSPITDKALMLLKNCESLHQDITPVYQTVARNGSPMRSTTIIIRNNDRIPIGFLCINF DLGTSLSDLCHLLLPQDAKGALGHGKGTGGLEGQSSEMFVQNLDDLLLSVTCRIRDQIYA DESITARNKTKEIVKALDQEGLFEVKNSVSRIAKILNLSRDVVYLHLRSHRAK >gi|319803623|gb|ADMF01000043.1| GENE 6 2864 - 3445 241 193 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|302859987|gb|EFL83064.1| ## NR: gi|302859987|gb|EFL83064.1| putative lipoprotein [Burkholderiales bacterium 1_1_47] # 17 190 50 223 228 159 41.0 7e-38 MSNFCTLSQAKPNERDPFKIPAYPEYPKLRLGTQLDAIYERLYRDGYGIRKPGISDALPK VLVVFDPRCSWSNHFWQTSQLLTEQIDFIWFPVCVSSDYSTAQAAAMLASENSWDVLREH EELFSDPDYCGIHPEAFRFTQADRDHVWENARIFRKAGGTSVPLGIFKTQDGRYIPLFGD NTASEIRSKIELS >gi|319803623|gb|ADMF01000043.1| GENE 7 3468 - 4691 487 407 aa, chain - ## HITS:1 COG:PH0014 KEGG:ns NR:ns ## COG: PH0014 COG1906 # Protein_GI_number: 14589976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pyrococcus horikoshii # 1 381 1 371 395 105 25.0 1e-22 MSIFLILGLVVATLIVLLRLKRSLGFSVLCSGLLIWLLLKPEPHLLVDGVVSMLQRSRTY DLVGSLYFVVCLEIELRQSGCLDGMVKYLQQLTSSKKLSMAIMAAFLGLLPSIGGARFSA PIVKQIAQGEAISCDRLSAVNFWFRHICEFASPIVPGIILACSVAGIPVIDLICHLAWLT PAAFVIGWIVLYHNVTLNEEKRIEISSSQKRKERFDFLLSFTPILIALVLMMTFKLSAWA ALGITVLATGLLLKLCRRPVQIADVLIRAVEWRLFRDVFCIFFFMELLESTGLLQALVAN VTQSAMPLEWVIAVLSFMVGILTGITQGQVAVVVPIVAATAPGNLEMLSIAMVCGLGGQM LTPTHICLTISLDYFKGDFFKTVGLCAICEALLLAAYGISVWLFPIY >gi|319803623|gb|ADMF01000043.1| GENE 8 4778 - 6322 660 514 aa, chain - ## HITS:1 COG:STM0650 KEGG:ns NR:ns ## COG: STM0650 COG2721 # Protein_GI_number: 16764027 # Func_class: G Carbohydrate transport and metabolism # Function: Altronate dehydratase # Organism: Salmonella typhimurium LT2 # 133 513 8 389 390 313 43.0 6e-85 MSPRPAFDALQISALDNTATLLKSVRISDEVVVGGQTDVLRIKALDDNPFGHKISIRDIH SSDSIVKYGEVIGTASRDIPAGSHVHVQNVESNRGRGDMAEQNAPASQLESCEEVFTLKV PDRPIINARSLCYRGYSRPDGSVGIRNLVGIISCVACANDVVVHLSDIEGVACFTHQQGC SQTKPDLALIAKVLTNLAKNPNLGAILYVSLGCESVPTEEIVRQAKTFGKPVEFLIIQKE GGLTQTVEHAKAVVADLKQKIAAAPTEHPFNTLKLGLKCGSSDTTQGLSANVIAGKITDI FTAAGASVVIGETTEFMGAEHIAARRCVTSEVAQEIAKRVSEMEARAKAVGVDMRGGQPT RGNIDGGLTTIEEKSLGALAKAGSSIFQRVIAYGDNVKQPGLVMMDSPGREPEMLTGLAA AGCNLILFTTGRGAPQGFPFVPVVKTTGNENTWQCLQEHIDCYVGKIMRGEESYADATQR LFDEIMLFINGDLTKAEQCRYNNSMNIYVTGPTI >gi|319803623|gb|ADMF01000043.1| GENE 9 6354 - 7052 371 232 aa, chain - ## HITS:1 COG:CAC3603 KEGG:ns NR:ns ## COG: CAC3603 COG2186 # Protein_GI_number: 15896837 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 16 221 9 212 225 96 30.0 4e-20 MSKIELDRNNKTLYGQIADILRERIMSGEFKPGDILPSERELAEEMQVSRIPVREAMKSL EYLGVVKQIRGKGVLVQTADLSNILKVVGPLVTTITPQILLNLFDFRLAIEPYGAAQAAK LATEEEIKTLQEILEVPKTAVENNQMSEEMSFEFHLRLMQASHNEVIATVSLFLSELQRQ SRHLTLWNKERREDAYCEHKKVFEAIKNHDSELAFQIMKNHLLEAKEQLPRE >gi|319803623|gb|ADMF01000043.1| GENE 10 7139 - 8527 1424 462 aa, chain - ## HITS:1 COG:YPO0081 KEGG:ns NR:ns ## COG: YPO0081 COG0471 # Protein_GI_number: 16120432 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Yersinia pestis # 6 458 14 473 475 306 38.0 5e-83 MLIGFLPLLLLFLDPPEGMDPKAWGLFPFYAGAILMVMLRPVGEATALAIFLGLYAVMMR GHTVALSGFALTMTWLVVGAYIIAQAFRDTNLGKRISFWMIRIFGRSTLGLGYAAAFADF IIAPVTPSNAARTGGIIYPIFLSVAESLGSYPDKNPRGFGAYISVLLYVVTMCTGITFLT GYAANTVAWALADQMLGLHITWLQWTTAFILPAGIVLLIAPYVMYLIYRPTLTKIDNVRI AREGLAAIGPMSSKEKILLCLFVLAIIGWATSSYTKINSTAVVLGFIAVCLMTNVLKWKD IAKNSQVWTTLMWYGGILGLAGAMNQFGFFKWMAEQLQLYVDFSSFSHAALLLTLVAAGS VCRYLFVSCGAYMASVLPVQFTIGLAAGLPAWDMFLVFLMCGVMGAILTHYANAAGPVLF GGGYVSVKTWWLIGLFFTLLSYIIFGLVGVPYWSMLGLFTSL >gi|319803623|gb|ADMF01000043.1| GENE 11 8606 - 9982 1250 458 aa, chain - ## HITS:1 COG:PA0881 KEGG:ns NR:ns ## COG: PA0881 COG2079 # Protein_GI_number: 15596078 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Pseudomonas aeruginosa # 9 417 5 418 450 253 36.0 8e-67 MTNQIWSPSKACADFVADLQYADIPAAVIDTMKRDTLDWIGCAVGGAADRSSQPIKVVAD VLGGNSQATSIDCGRRNVVLAAMSNAYFGHILEMDDVDRDSISHPATPNLAAAFAAAEFA GKQGKDVLLAAVCGFEIMLRIGAAITPAHYKIFHTTATTGVFGAAMAAGKLLDLDAIQLN WALGNAGTMSAGLWQFLPDGGMSKFLHTGAAAGNGILVAMLAKNGFSGATHILEGKQGFF AGYARQEVCYDLFKDFGEKWRAGLISFKPYPCCRHTHSAIDAALDIRRQAAGRGLKTIRL LTYTTANTVAGTRSPATGRQAKFSLAYCVASTLLRGVPTETSFSDQSVNEADVKALEHRI EVVEDTEINACVPRNWPCRIEAVTDDGQELHAQIWNPTGDPENTLSWDGVALKFQAMTDG IIPANVQDEIIELCKHFDDLDKPSLIFEKINTSFTRKY >gi|319803623|gb|ADMF01000043.1| GENE 12 10083 - 10676 695 197 aa, chain - ## HITS:1 COG:ttdB KEGG:ns NR:ns ## COG: ttdB COG1838 # Protein_GI_number: 16130958 # Func_class: C Energy production and conversion # Function: Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain # Organism: Escherichia coli K12 # 6 177 5 173 201 166 45.0 2e-41 MAVYELTLPLDDATVEKLQVGDIIYLNGQVCTARDIAHLKLRELADAGKPFPEDLRGGAI FHAGPVMKKDAQGKWYLSVIGPTTSIRMEPHADFVGQQGVKVIIGKGGMGDGTKAALQKY KQVYVQACPGCAVVLAAGIVGTKEPHWFEHGMPEAMWPLQAKHFGPFLVTMDSHGNSRYD KVRDYAQKVEKEILATK >gi|319803623|gb|ADMF01000043.1| GENE 13 10679 - 11596 211 305 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 25 285 28 281 508 85 28 1e-16 MATLELPYEKVYDLLHKCCTSISPDVLYLMKRAAAKETNPEAKTFLETMLKNVELAGQMD KPVCQSPGFPSVWIRWGEAMQPNLTNLMGNITQSVIEATKAGYIRPSIVHPLTRHNPGDS SGRGVPNYELRYEKDLPYCEIIVSAKGCGAELPNVAKILTPATLGKNYKGLKQLVLDTIC GSNGFMGARGYPCPPFSIGIGLGGQMDVAAKLSREAISTRNWLDHNPDPLFDELEQELLA DINKLQNGPAGIGGDTTALAVKIGWAATHTAICPVVINFHCWVARRFGIRFYPDGRTEQL FQAGE >gi|319803623|gb|ADMF01000043.1| GENE 14 11655 - 12119 336 154 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 1 147 420 564 570 112 38.0 6e-24 KDFGIFVILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICR HVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCV ERVEVRNRVAQYRWSTETTARDQMFLELFFDESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:32:16 2011 Seq name: gi|319803599|gb|ADMF01000044.1| Sutterella wadsworthensis 3_1_45B cont1.44, whole genome shotgun sequence Length of sequence - 34705 bp Number of predicted genes - 21, with homology - 18 Number of transcription units - 16, operones - 5 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 435 325 ## Ppha_1041 transposase IS4 family protein 2 2 Tu 1 . + CDS 545 - 2365 2138 ## Ent638_0501 outer membrane autotransporter + Term 2516 - 2558 8.0 + Prom 2501 - 2560 2.3 3 3 Tu 1 . + CDS 2580 - 3005 368 ## 4 4 Tu 1 . - CDS 3466 - 4767 1417 ## COG0477 Permeases of the major facilitator superfamily - Prom 4926 - 4985 3.9 5 5 Op 1 . - CDS 5148 - 5804 585 ## COG1280 Putative threonine efflux protein 6 5 Op 2 . - CDS 5843 - 9757 3658 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 9784 - 9843 3.2 + Prom 9900 - 9959 2.7 7 6 Tu 1 . + CDS 10063 - 12486 2040 ## COG0464 ATPases of the AAA+ class + Prom 12517 - 12576 2.7 8 7 Op 1 . + CDS 12655 - 14874 1957 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid + Term 14897 - 14945 9.0 9 7 Op 2 . + CDS 14966 - 16636 1194 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components + Term 16668 - 16715 9.0 - Term 16654 - 16702 13.0 10 8 Op 1 . - CDS 16735 - 17754 970 ## COG0679 Predicted permeases - Term 17903 - 17944 8.7 11 8 Op 2 . - CDS 18014 - 19894 2275 ## COG0326 Molecular chaperone, HSP90 family - Term 20088 - 20128 1.1 12 9 Tu 1 . - CDS 20175 - 21290 1407 ## COG3203 Outer membrane protein (porin) - Term 21381 - 21433 11.1 13 10 Tu 1 . - CDS 21479 - 23458 2614 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Prom 23709 - 23768 3.5 14 11 Tu 1 . + CDS 23847 - 24746 724 ## DSY3698 hypothetical protein + Term 24811 - 24838 -0.8 - Term 24688 - 24727 1.2 15 12 Tu 1 . - CDS 24806 - 25915 352 ## COG3177 Uncharacterized conserved protein - Prom 25968 - 26027 3.7 16 13 Tu 1 . - CDS 26096 - 26506 97 ## - Prom 26732 - 26791 2.0 17 14 Op 1 1/0.000 - CDS 26793 - 28484 1486 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components 18 14 Op 2 . - CDS 28652 - 30655 1792 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 30878 - 30937 4.2 19 15 Op 1 12/0.000 + CDS 31481 - 33643 2364 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 33654 - 33681 0.8 20 15 Op 2 . + CDS 33729 - 34247 444 ## COG0602 Organic radical activating enzymes + Term 34359 - 34388 -0.5 + Prom 34362 - 34421 6.7 21 16 Tu 1 . + CDS 34441 - 34705 120 ## Predicted protein(s) >gi|319803599|gb|ADMF01000044.1| GENE 1 1 - 435 325 144 aa, chain + ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 9 137 438 564 570 102 39.0 6e-21 NLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYRFVL QSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRNRVA QYRWSTETTARDQMFLELFFDESD >gi|319803599|gb|ADMF01000044.1| GENE 2 545 - 2365 2138 606 aa, chain + ## HITS:1 COG:no KEGG:Ent638_0501 NR:ns ## KEGG: Ent638_0501 # Name: not_defined # Def: outer membrane autotransporter # Organism: Enterobacter_638 # Pathway: not_defined # 302 592 1037 1358 1371 102 27.0 3e-20 MATTSNGAFAVEGGVLNVLGKKLKADSEGKVADTNLQINAGNVAVGADEDENGGLVVAGD HLAAARAYKSENVDSNVLWIGEATTFTSNISFTANEPNVIAVDIASVVNSGYKAAGEKNT VVNLVKFADNISITGANELDLVNLKDINHEVLTVNKDTGLYEFHTGLTNDLSVDFGTEAY NETATNADGVVAFNVNENFIDEVYDAGLLVAGDIENSVRQVQFGQSIIGDKVLFGLDKLY ESADKSAFETLKAQGVFNDNVTFEDFVDTDTDDEFVSLLKDPANTARDVLKYLNQMEENL DKTIVNAANTSVNMAVVGGAFTTALDINDQVTAAVSRRTSAQRVEGFTPWVDVFGTTNEA KRLYGNGAGYEADIYGAVLGFDYTAACGGTLGVAFNVGQADGNSVGSGAKVDNDADFYGF SLYGAQTFGDFNVKADLGYTQVSNDLSTNNVLGSYKESLDANVFTFGLGTEYLAKFGALN VTPHAGIRLSRIDMDDSKYGADYDAMTVYQLPLGVAFSGNFDVNGWKLAPMVDLSVVPAF GDKDAVATYTGGIQSVTRVVDTNPIQATLGVSAQNGAWTFGLNYGLTAGGDDRMNNAFNA NLRYSF >gi|319803599|gb|ADMF01000044.1| GENE 3 2580 - 3005 368 141 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPFSAPSSPPEPSVRNRLRPKYCNPAQLRGSAVKLFEAGYGYVRAARMLNIPANTVKDWS NAWKKGTFKTEISPSLFRYNRYIKEKAVRLRLTGHTLKEVSEMTGASQTSVKRWVEAYVA KKGLQGSVFGPRAQEEGGINQ >gi|319803599|gb|ADMF01000044.1| GENE 4 3466 - 4767 1417 433 aa, chain - ## HITS:1 COG:BH2528 KEGG:ns NR:ns ## COG: BH2528 COG0477 # Protein_GI_number: 15615091 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 26 428 5 403 419 349 52.0 7e-96 MSALPSKRPHKNAAFFAAQPEYLMKRNRVGIALSAVGIHASIGSVYAWSVLTKPVMAEMG ISLSSTTWAFSIAILFLGLSAAFLGKFVERIGPRASGLLSMLFFCSGLIGTALAVSMKSV ALLYFFYGAVGGIGLGIGYITPVSTLVKWFPARRGFATGLAIMGFGFASLIGGPLMQKLT ALYGLSANFLIMGGAYAVVMTLSSLYLMPPKAGETVDLTKLSDDASEKLKKAAAAQTGRQ YTRREAVQTWEFWSLWWLFFTNITCGIGLLAVASPMAQEAVGMNAAGAAALVGAIGIVNG LGRLAWSTLSDWMGRAATYVLFFVIETAAFFALAQTPSEAFFYILVLTIISCYGGGFSCM PAFLSDLFGVRQLSSIHGIMLTAWALAGIAGPMLLSVIKETTGSYHQTMLVFAGLMSAAL LLSVILKVKSTKH >gi|319803599|gb|ADMF01000044.1| GENE 5 5148 - 5804 585 218 aa, chain - ## HITS:1 COG:YPO3831 KEGG:ns NR:ns ## COG: YPO3831 COG1280 # Protein_GI_number: 16123966 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Yersinia pestis # 19 207 20 197 206 93 34.0 2e-19 MDKSIALYLFVSFVACITPGSGVLYTIASGFRGGMKCVLASPLGTCLGCSLMSALSATGL GALIANSPAAYNVLQVVSALVLVWFGLQSWRSGALDLSAASDSAAREGLGSGQERFTFRK IFWGAVVLQASNIMLIVFLLSLMPPFIRTEEPYLPQAVMLSALFVLVCFVVHLGYSWIAA AGAKRLAGPRFSFWLNRISAVLFWLLAVSVIWNAFFKS >gi|319803599|gb|ADMF01000044.1| GENE 6 5843 - 9757 3658 1304 aa, chain - ## HITS:1 COG:MA0189 KEGG:ns NR:ns ## COG: MA0189 COG0553 # Protein_GI_number: 20089087 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Methanosarcina acetivorans str.C2A # 654 1304 416 1076 1078 424 38.0 1e-118 MATFTSGISWETDEWFRTFSESFPQYTQPGIWIAAEERLASLRGAKLEWDATTRTVRLKL KNSRGQPYTLAMHFYPGAVHAAAPIVEAAAKIPGLLECLRAGDLPAPLLEAINASGLDIF MRRPGSIQFDPGMMSSECALLIAAFMHDLELDPGRWFKFIGIDFQKSADEALSAAGDNHS AAQSPNGPAAETLSEAQTNAASAAHAQEPLFAAGEALTGTFPFANLEDDALRLSADIAPA DIPDLGAEANLTRLRLWQAPGVPMLSPTIVSALPSSGLSAVQAKRSWCAFGDIEARTFMQ NLLSAASLTADEALKMLARREARQERLGTASPNSKWTRFLLTTIEKEPSAELPSLKLLSG HHTWDRIVFALQTEDQSIHWAEESGDMIMALLIPTRRDLAGADASFVVWRALAEAAAQIL AARAVLPLPAPAHYESDAADQSADGMCVYWHPALNAPGVKNLLAQVSALIGPLLPLQPLA PQCRAFAGLSTHPDAPYAGVYLALTLLITSLMRHTSKRNREIARHLVGRRVRSTLTGEGF APNVASLPDLKNVLAGFFALPIAGAALPAKLLLTGVLENGALKLTLSLPPRQGPRKGEPL TLADWDGPDGITAGPNSIVREALKLLAADYPLFAEFGPNFDLPSRIERSRWEYFLFTELP ELSACGVDAVLPESMRRIEKPEIVLTAAAPGNARMQKRLATQGMLNAAALADFRWEIAVG DERMTLAELRARINQEGELLTSGSALFHLTKEDLDRLVAEWAEAQKKELSNWDKLRALLS GSSNGRRVEAAEALLERIRESAAVKELPPPVELNAVLRPYQIRGFSWLVQNAMLGLGSLL ADDMGLGKTVQVIACVAELKARGELDRGKVLIAAPASLLVNWEREIERFAPSLTAQIYHG KDRTIFALDHSRPDVIITSYGILKRELPQLSQMQFRLLVLDEAQAVKNAKTGQAKAAQEF PADSVIALTGTPVENRLAEYWSIFSIVEPGLLGSPAQFRRDFVMPIEEHRDRAAIDRFRR ITSPFLLRRVKTDPGILDELPEKNVVDYFTTLTPKQVALYEECLKANLESLETLDRESRE QEAAGDRLHAAQARLSRRGQILRMILNLKQISNSPSQFQKEFVDKPDSGKAEALLELLRR CRQSGRKALVFTQFREMGERLVRWIEDATGRKPEFLHGGVPAAKRMEMVDAFQNNPDSEI FILSLKAGGTGLNLTAASAVIHYDLWWNPAVEDQASDRAWRIGQRRDVVVYRFITAGTFE EKVNEMLKKKRELADLAVGVGESWIGDLTDDEIKSIFSLSSSGI >gi|319803599|gb|ADMF01000044.1| GENE 7 10063 - 12486 2040 807 aa, chain + ## HITS:1 COG:RSc1961 KEGG:ns NR:ns ## COG: RSc1961 COG0464 # Protein_GI_number: 17546680 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Ralstonia solanacearum # 204 806 158 768 771 298 36.0 3e-80 MRKRRRTCTTIYLGSNDKRFEYVTDGNVKLADSVTIERWVVRLMACTKAWMRLDADGMRT IHGTRIEGLLNIELQWLAELTKARTIESEAFSVDDDDDDDDGDDKLKLRPLTARAIVAAE KDLDKRFADFEVAGEAVTCVWEDEDFGSLGKDIPQRLKQLGFKRTAPRALEFCRKLVFGN GDISTAEASAEDMVAGLPSTFGRNIRLIAEAFDLTRDELETLAFLAVVKHFAGLRSICNA YDYERRGLDLVVEVLSAAFGRKVSKTVFSKSKTLWNTGLISGINSRTPDFEDQISFLDDG DLLDTIFTIPQTLEEMFAHAVTAAPQSILTLKDFSHQPEIESYLLPYLKKALAEHRQGVN VLLYGPPGTGKTELARLLAKETGSALYEVSPKSGPDNGYRSDKNNRLTRWHCGERLFANT SQTMLLLDEADDVCNAGLISVFGMATTARTNKAELNKTLETAPVPTIWACNSTESMDPAL MRRFDVVLEIPIPPESVRRRICRKAFDGAVSEHFIDRCAACEELSPGVAARTAGVVKTLS GEVDADETAEKLINATLMAQFGKELPAALNNVSDMYSTAFVNTDADLDAIAEGLKRTRSG RLCLYGAPGTGKSEYVRWLAARLDMPLVIKRASDLLSPYVGMTEKLIAAAFHSARQQGAV LLIDEADSFLQDRANARASWEVSQVNELLTQMESFPGIFCATTNLFKEIDRASLRRFDLK AEFRPMTTKQTVEFAKCCAGKLALGEISAADLARLERLDGLTPGDFAAVRRGGRFNPLKN TADFVTRLEGEVEMKEEGRKKPQIGFY >gi|319803599|gb|ADMF01000044.1| GENE 8 12655 - 14874 1957 739 aa, chain + ## HITS:1 COG:PA4168 KEGG:ns NR:ns ## COG: PA4168 COG4773 # Protein_GI_number: 15599363 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Pseudomonas aeruginosa # 28 735 104 798 802 402 35.0 1e-111 MPVRYQTLSKSALAAAVAAACVSFPAWAEEDPVDLGAVTITATDISTRTERNSTYKSSAM STTTGLALSPRETPQSVSNVTMTRIEDEGITDMSEAMRKTTGITVIQNSGTTRFLSRGFY VDQIQEDGVSSTVSGGASGNPYRDAQSLTDLAIYDHIEVVRGPTGLTQSNGEPGGTINAV RKRPTADFQASASAEVGSWDTYRTVGDISGSLNEAQTLRGRFVGILSKKGSFKDDVGEQS GTVYGILEADIDENTLVTFGAIYQKKSETPDFFGLPLDVNGNSLNLPKETYLGLDWTKTH YNKTNLFAELEHYFNDELRIVAKANYLRYDSDTVLGALVGPAAGCDPEHPLGQMNNHQNY DNSGWQAAGVLNVNGVYPLFGRKHDVFLTANLNREHSDSTWRRVWDDTPFDITDFTGSEI AEPDWGNDSILKNRTSYDADRTDLGLLLGTRYNLTDEWHIIAGARYAKFKSRGHTYWQIW NGKPDPDGTTTSEQTTTHLTPYGGVTWDFAKSSSLYFSYTEIFKPQSDRDASGNFLDPLV GENYELGLKSEWFDRKLNTSIAIFHLSQKNRAYYPDPKSDIAIALGEVVSRGVELEASGE ILPGWNVFAGYTFNTSSYEHDPSKEGDTYSPYTAKHILRAYTTFELPGPAYRWTVGAGAQ VQSRTKNTINKYPYTLEQGGFVVYDASVHYKITDKIKASFIVNNIFDRRYFLNVNNRALS MNSYYGDPRNFLLRISAEY >gi|319803599|gb|ADMF01000044.1| GENE 9 14966 - 16636 1194 556 aa, chain + ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 7 549 13 557 564 365 35.0 1e-100 MNLLRNFYRLAAPFWLTRQSWKAWLALGSAIACSLLFVQVVVLVARWQKAFFDALSNFGA KEIPQLLLEYLLYLAAMTALIVIGNWILKRLKFAWREHMTVAFERRWLSEHRQYRLQLSG EPDNPDQRIAEDLWLLSELTLNLVKSFCQTMARLISFIGLLWAASGVQKAVIGGVEIEIS GYLVWCALGFSVVSTLLMHWVGNPLRALNVTRQHTEADYRSALLLIRENAAEIAFMNGEE TDRMRLRDAFRHIRKNWRALIKREVKVETFTALQMRLTWFIPIAATLPLYLQKSITLGGM MQAQTAFSNVVDGFDWFINSYRNLILLAAVVDRLSGFQSAMDKLPEAPESERVDDAVLKL ENVTLMRPNAGVLAAGIQGEFRRPGWVRISGPSGTGKTTLLRSIAGLWPWRTGKITLSCG AFFVPQKPYLPKGTLRSVLSYPNPKVKNGAELKRVLRLVGLPQLENELDKPMDWGKRLSG GETQRVSAARVLLCRPKMVFLDEPTGQLDSRSAEALLRVLQSELPDTHFFVIAHQNEVDQ LGARTFELHPAAGAAG >gi|319803599|gb|ADMF01000044.1| GENE 10 16735 - 17754 970 339 aa, chain - ## HITS:1 COG:SA2054 KEGG:ns NR:ns ## COG: SA2054 COG0679 # Protein_GI_number: 15927838 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Staphylococcus aureus N315 # 47 296 9 256 302 85 28.0 1e-16 MLKAWGTVLDPSRFSVCCHSPLVSSKCLRALTVVIMDPSFYKVVAFISFITLGWCLRKFN VLKPEAFQAISGLVMFVTLPCTTITGLNGTTIGGEMALIALFGFLANIAFLIVAFLWTMR AADKDERDFRRLNTCGLSIGPFAVPYVQAFLPTSGLVTTLMADVGNAVMAAGGTYAIIES MRSKTSWLSMAKRICYNLLHSGPIVAFLFMVVLCLLEIKLPEVVTTVTGFGAAANTFLCM IMIGESINLSVTFKDLLYILKILAVRLVIQVGLALFFWYCLPWDYDVRRAMVLVAFAPVP AMNLIYTAALEGDLGKAANLNSLSVAMAIICMSTAIYLM >gi|319803599|gb|ADMF01000044.1| GENE 11 18014 - 19894 2275 626 aa, chain - ## HITS:1 COG:HI0104 KEGG:ns NR:ns ## COG: HI0104 COG0326 # Protein_GI_number: 16272078 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Haemophilus influenzae # 4 624 11 630 631 652 55.0 0 MAAEVHAFQTKVSKLLKLLANSLYSNKEVFLRELVSNASDAIDKLRFESISHPELLQGDP AFAVRIRADKEAGTLTISDNGIGMTLEQANQHLGTIAQSGTEDFLEHLSADQAKDAQQIG QFGVGFYSAFIVADKVTVVSRAAGAAENEAVKWESDGSGTFTSELTTRAERGTDVILHMK KDEETFLMPWTLRETITKYSDHISVPVYLFETKPAEKEGEPETTEWVQVNDAKALWTLPP KDVTDDQYKEFYKHLTHDWQDPLCWAHNRVEGDLEYTSLLFCPSTAPYDLYNRDVQKGLK LFVERVFIMDRAEAFLPNYLRFVKGLVDTNDLPLNVSRELLQESRTAAKLKKALTKRCLS MFEKLEGEKEITFWTQFGRVLKEGVVEDPDNREAVLKLLRFASTASEGSENVTLKQYLER MPEGQKAIYYLIAGSREAAMGSPYLEGLKKKNVEVLLLWDRIDEWMMGSLTEFEGKKFIS ATAADLELGDIKTKDGEAEQAVETSKADEDAAVARFKAALGDRVADVKASARLVDSATCV VGAHDQMLTQQMRRMLEAAGQTVPEEKYTLEVNVENPLVQKALKETDPAKFSEWAAVLLD QALLAEEGSLKDPSGFLKRLNALLLS >gi|319803599|gb|ADMF01000044.1| GENE 12 20175 - 21290 1407 371 aa, chain - ## HITS:1 COG:RSp0051 KEGG:ns NR:ns ## COG: RSp0051 COG3203 # Protein_GI_number: 17548272 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 184 1 178 382 75 38.0 1e-13 MKKQTLLAAALLCAAFSAAASDIEVYGVLDYGLTWQDRTNADGSDSAALQMTSGQYIGSR FGIKGTETLANGLKVGFVLENGFGADTGSLGQNGRLFGRDARLFLDGSFGYLSFGRMGSM VGGNGPYARFGHVVSPFSCGWGDIGGHLQVVSLGYEFIDNAVAYTTPKWAGFDATVQYSF GSDTKSYGDKGVEGKSSVERMLSAAVRYQNEALMVAAGIESINHAQPAADEAQLDDAFSY NLGANYNAGWAKFFVYGQIFENYANAAKTTTFHQDSGVDGFGVNIGADVPLFGGTFKASF GYGDFEASRDSAISMKTCQTAVGYTYSLSRRTTLYTAAGWIHSNNSSAYEAQKPATAEDI YQFTAGIVHKF >gi|319803599|gb|ADMF01000044.1| GENE 13 21479 - 23458 2614 659 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 104 657 1 477 484 132 27.0 3e-30 MSNLSRRSFLRTGLAGGATLAVSTVSTAALAAKPAKGLYIPGTYSAKAAGIGDIVVTMTF DENRITDVVLNVAHETPSIGQAAAERLKSSLMAAQSAQIDVVSGASITSNAVMKAAGKCI AQAKGEIPVEVVSNGADADADSGDWLGKAPEIAEKSITATYTTDVLVVGCGTGGLFAVCA AAEEGAKVIGIDRFSTGTGVRGDVGGLDSRYQKAWGTKIDKFDFVTMMTQYAAGHINQDL VKVFCEQSGAVVDWYGDRLAERGVELWHESGDKDDHTRYEHFAIGHSPRWAGKTTEDGKK LNGNIVLVDYAKKLGARFDYNTRMVKLEKQAGRVTGCIAETGDGKFVRYIAKKGVVVATG GYAQNYQMLEALQPWNLRVIGRNGGLPGARGDGIRACLWAGAAMDETHSTMLFDRCALRI DQPTGAETAKKGDSGFFWIGSQPWLKVNADGKRFFNESGTYENILHADEYQKGHCHYTLF DANWPEQTKQFKMHGCSRVHPFENGADPNILWSVFAEKMLPGLIEKGFVVKADTIEELAR KLGLPEKTLKATVERYNTLAQNGKDEDYGKEPHRLAALTKAPFYGAKNTGYILCTMDGIR IDTTMNAIDTDGNPIPGLYVIGNDSGGFFANTYPNLATGVACGRTVTFGRLVGKHLAKA >gi|319803599|gb|ADMF01000044.1| GENE 14 23847 - 24746 724 299 aa, chain + ## HITS:1 COG:no KEGG:DSY3698 NR:ns ## KEGG: DSY3698 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 15 216 2 206 272 78 21.0 3e-13 MSEIPKKSKPISVRRYRIGDYAHYMGVGRDFLKHYEKCGLLSADHHDNGYRHFGFEQSSL ILECMRLRNCGYTVREMGGMLRDLSGVEVRQSLHEAREALEKRIKHTQAIAAEIERLEEW FDIRQSQPEDWEVTSAEGRYYLPHANGSQFLEDERIYEILPQWLDWLSVVKSSLKFNAPD QAGNGFSYQWGLSVEASKAERCGIPINGAVQFIPPEKVFVYHFGGLGRLKVLERLANGTH PLFEVLQSLNLCITGDCFMDIFMTANRKAGGEGYGVFRIPVEPKASPDAKSIGEMKCAI >gi|319803599|gb|ADMF01000044.1| GENE 15 24806 - 25915 352 369 aa, chain - ## HITS:1 COG:NMA1635 KEGG:ns NR:ns ## COG: NMA1635 COG3177 # Protein_GI_number: 15794529 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 2 369 4 372 375 333 47.0 3e-91 MWKPASPYNNLPELPPPFRETAKIFRQTTQSRVALERLHQTVRLLPEKEIFVQIIPVLEA QASSEIENIAAATDNLFKYLDADSQADDAAKEVLRYRQALWKGMDSLKRCPLSLRTMTAV SSTLRGSKVSVRKLNGTCIASASSGQVIYTPPAGEALILEKLHNLVEFLHSPSEMDPLVK MAIAHYQFEAIHPFSDGNGRTGRILNILYLAESGLLSQPVLYLSRYIIRHKLKYYAALLN VTKEGAWEDWILFMLQAVEETALWTCLKAEAITRLKRETTCFIEASPLLKGVYSPELVQI IFMRPCCRIAALTEAGIAKRQTAMKYLNLLTQAGILHSAAAGREKLFINSRLMALLKSDL HEYPPLETV >gi|319803599|gb|ADMF01000044.1| GENE 16 26096 - 26506 97 136 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRGSAQTVLFRAGSFFGDEKQAERVIRERSGRLAAFEKTKANIREGQLAVIPSAIRSSIR HEHYVFIVSKRCSLSKLLNNSSGLMNNTSMSGSEKMPGGNDQRIAAALCHCSLFEIRAAN CSSHVLTCCCDEAPIA >gi|319803599|gb|ADMF01000044.1| GENE 17 26793 - 28484 1486 563 aa, chain - ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 16 560 17 556 564 305 33.0 2e-82 MRTPIAPNGLRRLIAARLFSRTQWRIWALAALVLAAYAVNIKLAVLYNDWNGRFFNALQA VNKAAIFRELFYFIGLAAAIIILLVWAGYIKDRLMLALRRDLTEVFFKRWLSPQSAHYLL RESGEEPDNPDQRIAEDVRLVVSLSVSLAVSLYDSLLTVGSFSVILWQLSGSAEVWGFTI PGYMFWVCVLYTIVASGLTHLIGRKLKPLNINAQHMEANLRAALMEKRRHADAIAGAHAE SVEEASLSERFHQLLRVLIALVKRKRDLNLFTVGIGQFTHLAPIFFALPSFLAGVIQLGG LMQIRGAFNDVARSLSWIIMSYEELAALAAAYERLERLESGLTQADHTRRQIQAHNSADS KRSDGLSADILLKIPRGRAAALNAEIPVSFSLKPGSLAIIAGPSGIGKTTLLRVLAGFSE SFTGCIRCGGSVLWMPQTPYLPKGELFDALAYPKAPDELTDERAAALLSKARLTHLTDKL RESADWSTVLSGGEVQRLSLLRALIAKPDVLLLDEMTSGLDPVNAREMIELLGKELPHTV IVLVTHQAFLYPLADQIIQLKGE >gi|319803599|gb|ADMF01000044.1| GENE 18 28652 - 30655 1792 667 aa, chain - ## HITS:1 COG:CC2194 KEGG:ns NR:ns ## COG: CC2194 COG1629 # Protein_GI_number: 16126433 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Caulobacter vibrioides # 26 646 31 699 733 157 26.0 7e-38 MTQQLQLPLAAALLSALSGSLWAESAAYLELDPVVVTATRTAQPLSQAASSISVVKAKDI EETVPQTFTDTLLDIPNVDVESSSSVMFSRIRIRGSEPNQITYLVDGLRQDDTTAAGNQF IGIFIDPELLKQVEVKRGGGSSLYGNGGIGGTLSVTTKSAADFLAGTDKNYGVKVKTGYA SDTKEWQKSAYVFGRHDIWDVLVGVNRRDSGNVKNSSGRRIDNNSDAEYTSVIAKVSALP TDEMAFSLAYNFDEAQDEWGRQDRWFYKNKQNRITGKWDFNSGPLLNLSAAVQYVDSTFS FDSGIKKAQNNFDSIGGNLQNTFEFSAAGQHALTVGGDIYKKSQSGVEADSSGHWVNAPS RPDSDAVDAGLFIQDQYAITDYLALTPVLRWNYYKRESNTGFASVSDSKFTPGLTLTVKP AKPVSLWASVNTGYRPPILDELYFSMVWPGTHTVVVPNPDLKPEKSLNYEAGSSFKADGV FGSDDHLFAKAVFFYDDVKDFIAPKGWFEPTTPPTVYYSSQNVGHVVRKGIELSGTYAAG QFSTSVSYGLLHAVDKETNERMNGITPQSANLKLAYAFPAQAINVWYRAHWSKGGESSVE DRATGKNLHFSSFLTHSLGAEWSPKVADLANLQAGIAVVNLFDKEYRMLNGSYGSGRGVR LWLSAQF >gi|319803599|gb|ADMF01000044.1| GENE 19 31481 - 33643 2364 720 aa, chain + ## HITS:1 COG:nrdD KEGG:ns NR:ns ## COG: nrdD COG1328 # Protein_GI_number: 16132060 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Escherichia coli K12 # 4 717 5 702 712 269 29.0 1e-71 MFKVLKKDNTLEDFKPQKIVEAIMKAAFRCDKQIPDETMFAMANSISERLQSRKKVPVAE LHELVIGTLATFGFKDVATSYAEYRYYKNNYAKTFEQLRQDADDVLRLGDRENANFDSSL VSTKGSLIKGFLTKSLYRQFYLSGREKEFTDRGDIYIHDMRDMILGCINCCLFDIGSILR GGFEMSNVRYTEPKTVLSALQVVGDITLVATAQQFGGFTLAELDKALLPYVLKSWKTAHD KYIELGLSEERAAEQSDKDVTRELEQGFQSLELKLNTVPCSRGDFAFTTISFGQWNLKDY APFERKWLSKINTVMLQVRRNGHGPHHKPVVFPKLVYLYDAPQIAADQYSSALFDEAVKT STECMYPDYLSLSSDYGTVSKLFREHGVITSPMGCRAYLSPWHDEKGRYVAIGRCNIGAV SLNIPLIIRLVQLEHPDNWRTAFWTELDERLEVIREFFKKRYDIIRRQKCSSNPLAFTQG GFYEGTKDPDDEVGDLVRYMTASFGITALDEATFLWTGKRLLEEGGAFSEEVLRHLQARI NVFKKEDGWLYAIYGTPAESLCATQAKQYDAFCAKQGIDNVFRHTPHYSPEYFTNSFHVN VTEEITPFEKQDHEFKDFHLCEGGHIQYVRLDNPENTDAVKAVIQRGMELGFYQGVNFDS AYCGDCGTHSTNVLMRCPKCGSSNLSVISRVCGYLGYSNVNGVSRMNEGKMAEIHNRKSM >gi|319803599|gb|ADMF01000044.1| GENE 20 33729 - 34247 444 172 aa, chain + ## HITS:1 COG:PM0941 KEGG:ns NR:ns ## COG: PM0941 COG0602 # Protein_GI_number: 15602806 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Pasteurella multocida # 1 152 1 157 158 143 44.0 2e-34 MNYIGLSAYDTANGPGVRVSLFVSGCTLRCKGCFNKESWSFTAGRPFTAETEAQIMKALD SKWIAGFSLLGGDPFEPEHEAVLAGLLERIKERFPDKTVWAWTGRTFKHVEKSRLLPYID RLVDGAYVQKLHLEKQGAWRGSSNQRIIPLYQGRIDESPAAQAEAAAAEAEH >gi|319803599|gb|ADMF01000044.1| GENE 21 34441 - 34705 120 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPRRSQPKRRQTAELSAKRTRVGARG Prediction of potential genes in microbial genomes Time: Sun May 29 20:32:54 2011 Seq name: gi|319803577|gb|ADMF01000045.1| Sutterella wadsworthensis 3_1_45B cont1.45, whole genome shotgun sequence Length of sequence - 17988 bp Number of predicted genes - 19, with homology - 16 Number of transcription units - 10, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 358 - 429 94.0 # LTTRR5S [D:1..117] # 5S ribosomal RNA # Leptothrix discophora # Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix. - Term 518 - 564 3.9 1 1 Tu 1 . - CDS 581 - 1639 1051 ## COG2055 Malate/L-lactate dehydrogenases - Prom 1776 - 1835 2.8 - TRNA 1838 - 1913 86.3 # Asn GTT 0 0 - TRNA 1957 - 2032 87.2 # Asn GTT 0 0 + Prom 2059 - 2118 7.9 2 2 Tu 1 . + CDS 2205 - 4226 1665 ## COG0556 Helicase subunit of the DNA excision repair complex 3 3 Tu 1 . + CDS 4348 - 4887 531 ## COG0394 Protein-tyrosine-phosphatase + Term 5060 - 5092 -0.3 - Term 4991 - 5024 5.1 4 4 Tu 1 . - CDS 5047 - 6162 553 ## COG3203 Outer membrane protein (porin) - Prom 6346 - 6405 4.3 + Prom 5998 - 6057 2.1 5 5 Op 1 . + CDS 6095 - 6319 183 ## 6 5 Op 2 . + CDS 6356 - 7363 765 ## COG0583 Transcriptional regulator 7 6 Op 1 . - CDS 7384 - 8907 1336 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 8 6 Op 2 . - CDS 8928 - 9977 1285 ## PCC8801_3875 hypothetical protein 9 7 Tu 1 . + CDS 10552 - 10665 89 ## + Term 10885 - 10924 -0.9 + Prom 10920 - 10979 3.2 10 8 Op 1 13/0.000 + CDS 11104 - 11550 384 ## COG1959 Predicted transcriptional regulator 11 8 Op 2 20/0.000 + CDS 11587 - 12798 1437 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 12 8 Op 3 14/0.000 + CDS 12887 - 13294 645 ## COG0822 NifU homolog involved in Fe-S cluster formation 13 8 Op 4 10/0.000 + CDS 13300 - 13623 507 ## COG0316 Uncharacterized conserved protein 14 8 Op 5 11/0.000 + CDS 13637 - 14131 572 ## COG1076 DnaJ-domain-containing proteins 1 15 8 Op 6 13/0.000 + CDS 14222 - 16108 2263 ## COG0443 Molecular chaperone 16 8 Op 7 9/0.000 + CDS 16150 - 16482 413 ## COG0633 Ferredoxin 17 8 Op 8 . + CDS 16494 - 16694 333 ## COG2975 Uncharacterized protein conserved in bacteria + Term 16698 - 16731 1.5 18 9 Tu 1 . + CDS 16847 - 17530 315 ## Sca_2067 hypothetical protein 19 10 Tu 1 . + CDS 17631 - 17988 289 ## Predicted protein(s) >gi|319803577|gb|ADMF01000045.1| GENE 1 581 - 1639 1051 352 aa, chain - ## HITS:1 COG:ybiC KEGG:ns NR:ns ## COG: ybiC COG2055 # Protein_GI_number: 16128769 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Escherichia coli K12 # 20 352 24 354 361 251 42.0 1e-66 MRHSPQEIFNTAARWLEATGSTPYEARVVADHLTNANLRGHDSHGVGMIAMYALYQKDGR LKSNTPARLVKDAGSILQFSGDRGYGQRVGFEATNAAIERAKQNGICMYTIANTCHLGRI GTYGEQCADAGMVSLHFVNVNQFDPLVAPYGGADARFGTNPFCCAIPAANNHGRFILDFA TSIVAMGKTRVAFLAGKHFDEPVIIDRNGNETADPAPMWREPRAALMPMGRYKGAGLCFA CELLAGLLSKGGTIADKHPRDGAIVNNMTSFVIDPAALCDLAWMKEEMDAMIDYVKASPQ PNPENPVLMPGEIERIRTADREAHGVEISDGEWAAIIKTCRDAGVPEFELQA >gi|319803577|gb|ADMF01000045.1| GENE 2 2205 - 4226 1665 673 aa, chain + ## HITS:1 COG:RSc1011 KEGG:ns NR:ns ## COG: RSc1011 COG0556 # Protein_GI_number: 17545730 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Ralstonia solanacearum # 6 671 19 688 696 934 71.0 0 MPTYAYPNSPFVLHAPFPPAGDQPAAIDALCAGIENGLMNQTLLGVTGSGKTFTMANIIA REGVPAIIFAPNKTLAAQTYSEMRDFFPENAVEYFVSYYDFYQPEAYVPARDLFIEKDAA VNDHIEQMRLAATKSILERRDTIIVATVSAIYGIGSPESYTTMRMILRQGDRRSQRQLIN QLVKIQYTRSDMEFNRGTFRVRGDTIDIFPAEHAETAVRVELFDDEVDTVSLFDPLTGKV VQKVQRFVVYPASHYVTPRDEIVRAITSIKAELKVREAELLKDNLLVEAQRLEQRTNFDL EMLDQVGFCKGIENYSRHLTGLAPGAAPPCLIDYLPADALMFFDESHVMMGQLGGMYRGD RARKETLVRYGFRLPSALDNRPLRFDEFEAKMRQSIFVSATPAEYELERCQGEVVEQVVR PTGLVDPAVEVRPATTQVDDLLSEISETVKQGERVLVTTLTKKMAEDLTDFLSEEGVKVR YLHSDIDTVERVEIIRDLRAGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSTRS LIQTIGRAARNLHGRAILYGDKMTDSMKAALNETNRRRQKQEDFNREHGIVPQGVKKAVR EIIDGVYRGPDVAPESSASDAVPMDEKTLSKRLRELEEEMMSYAKNLDFEKAARVREELM ALRKQAFGASAPA >gi|319803577|gb|ADMF01000045.1| GENE 3 4348 - 4887 531 179 aa, chain + ## HITS:1 COG:PA2978 KEGG:ns NR:ns ## COG: PA2978 COG0394 # Protein_GI_number: 15598174 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Pseudomonas aeruginosa # 7 154 1 147 154 114 42.0 9e-26 MNNNQAIKILFVCTGNVCRSPMAAAIFAKKAKEAGFEDVMLSDSAGTSDAHEGEPCDARA VLTCRRRDVQLAGHRARQIEASDFEKFDLILAMDWEVLTELQQRAPAAMRHKIQLLMRYA NDIDEAIVPDPYYGLNEGFTRVYEYCSDACEGIIENFEKKAKQLLVARASVAAAEAKLS >gi|319803577|gb|ADMF01000045.1| GENE 4 5047 - 6162 553 371 aa, chain - ## HITS:1 COG:RSp0051 KEGG:ns NR:ns ## COG: RSp0051 COG3203 # Protein_GI_number: 17548272 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein (porin) # Organism: Ralstonia solanacearum # 1 203 1 192 382 84 34.0 4e-16 MKKIAALAPIAILLGLPASSIAMEVELYGLIDTGFKYQNTDDFQTGKNASSFAMVSGERN GSRWGLRGNEALNDEITLGFQLESGYDSDTGAMKQNRLFGRQSVLTLETKHYGIMKFGRT GSVNSPNGSFLSTAVIASPWGGGTAGGAHSAFFYTSWEDNVIEYKTPAFGGVALIGHYSF EQNGTESEKSSHNNRDAAVGVSFKTKSFEMRAAYERILTDTRLDFEDPETLTIAAQWLSG DWTVNFGAQYAKNVRQLGSGIVSQNVTLSKYAQSENLSAVTDLPNGLKGYGLVGGIQHQV GAFRLKAAAAMMNYKVDDTDARLGSWQTTWGVEYTLSKTTGLYAAYTYAKGTHEADNYQQ NEAIFGLRHWF >gi|319803577|gb|ADMF01000045.1| GENE 5 6095 - 6319 183 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAIEEAGSPNSMAIGANAAIFFICFSFEVVDQRVRAEKHLSMSLTRSLIFSDGMGEGILL RLKVVCRFSKVMGS >gi|319803577|gb|ADMF01000045.1| GENE 6 6356 - 7363 765 335 aa, chain + ## HITS:1 COG:slr1871 KEGG:ns NR:ns ## COG: slr1871 COG0583 # Protein_GI_number: 16330261 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 16 264 9 258 295 87 27.0 4e-17 MTTSQKQFKNLLAWEAFLHTARTGNITLTAQVLNIDGSAVSRLIKGLEEELEQPLFDRSS RPFSLTPRGKRLREEVEPLVTGFEALISRRFEEPKQIIRVSAPADLSRDIIPEQLMNYTI EHPNVQFELSSLGSASEVLAGTVDAALTQHRPSNNANLTLRPCITASSPVLATPEYIDRA GLPQSIADLRYHTGLLQKSRLHPVTSILYSGGEPSELLRWKNVFIANDQYSLKHVLLRGY GITIDLCPQFVVDELDSGRCIPILDGWARPAWDLCIVTRSDQESSNPTLRHFAQWWANEE MVGSMSRVMAGRRALERALMRSGASLDKTLRTEKD >gi|319803577|gb|ADMF01000045.1| GENE 7 7384 - 8907 1336 507 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 24 507 23 478 484 188 32.0 2e-47 MTQASRRALFKNAANLLIGAGLGTVTCAQAEQPEQKSWDETYDIVVIGSGFAGLAAAIEA RQAGASVIVLEKMRTPGGNSIINGGILAAPGCPQQKAHGIQDSPELLAQDMLKAGLYLND PAKVKFIADRALENYNWCVNELGVEFHPTAIGQEGGHSVPRYVRTMNGSGSAYVQKELEK LKSLGVEVRLRSYVEHIVRDPKTQVVEGVQIRQGYRFPKAESGKPVSIRAKKAVILCYGG FGADVAYRTMYDPRLKAEFQTTNQPGATGELWRETAAIGCVQIQQDWVQCGPWCNPKEKG MGLSVVFNQSGGAEFGVWVDSTGRRFVNELANRKVRADAIFALHDKGLKAYAICDQNGVD HVTDLQAKCVPYLMGIGAVEKFDTIDALAAAYAMDPDTLKATIAQVNDAVASGKDPLFGR YMNKEFKSMNRGPWYICECTPKVHHTMGGLLTTPEGRVLDIRTSKPIEGLWAAGEATGGV HGAVRLGSCATLDCLVMGRTVGKAAAS >gi|319803577|gb|ADMF01000045.1| GENE 8 8928 - 9977 1285 349 aa, chain - ## HITS:1 COG:no KEGG:PCC8801_3875 NR:ns ## KEGG: PCC8801_3875 # Name: not_defined # Def: hypothetical protein # Organism: Cyanothece_PCC8801 # Pathway: not_defined # 45 346 49 323 328 214 39.0 6e-54 MKFLKHVAFAAAMGCVSISAFAVGHYSPDQGYAYDVVRHGVMISEKMLPNEDGRNINGPT VIKAPSWLKNAPGKYLMYFSHHTGSYIRMAYADKLTGPWKIYEGGVMDLAQITKAGLSWG PDHVASPEIWIDNEHQELWMYFHTPITPAPKFDDPDYQKKVLQQKQATYRATSKDGIVWT TNGRKIAEHYLRVLPAEGGGFWGFARGGALSYSYDGKWLFDNLKPGPMERNPITFSMARH VALLKEKDDLLLFYSAIADVPESILVTHIKMDGPDWTRWTASEPKLVLTPETDYEGANLP MKPGTFGSSKDPERGLRDPFVIRDDGKLYLFYTIQGEKGIACAELVSKH >gi|319803577|gb|ADMF01000045.1| GENE 9 10552 - 10665 89 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGTCFSFVRWYFDKPKIPEGGSMAVPNEVFREVVEPN >gi|319803577|gb|ADMF01000045.1| GENE 10 11104 - 11550 384 148 aa, chain + ## HITS:1 COG:VC0747 KEGG:ns NR:ns ## COG: VC0747 COG1959 # Protein_GI_number: 15640766 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Vibrio cholerae # 1 129 29 155 188 130 47.0 6e-31 MVDIAMRARESDAPVPIAQVAERQKISLAYLEQIFCRLRRAGLVESTRGPAGGYKLSEPA SQITIDRIVLAVDENMDTTQCRGEGTCLGGAACLTHHLWEELNSVIESFLASRSLECLIE EHEAREAAEADSSASVSIPAVIPVRKSA >gi|319803577|gb|ADMF01000045.1| GENE 11 11587 - 12798 1437 403 aa, chain + ## HITS:1 COG:RSc1019 KEGG:ns NR:ns ## COG: RSc1019 COG1104 # Protein_GI_number: 17545738 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Ralstonia solanacearum # 3 403 6 405 405 602 70.0 1e-172 MKLPIYLDYSATTPCDPRVVEKLVPYLHDHFGNPASHSHSYGWEAEKAVEEGRTQIAALI GADPREIVFTSGATEADNLAIKGAAHFYRDKGKHLITVKTEHKAVLDSMRHLESEGYEVT YLDVDEEGMIRWDDLVNAIRPDTTLISVMAVNNEIGVIQDIARIGELCRERGIVFHCDAT QAAGKIDLNVDHLKVDLMSLSAHKVYGPKGIGALYVRRKPRVRIECQMHGGGHERGMRSG TLPTHQIVGMGEAYRLAREEMATEVPRIKRLRDRLWEGIQKNISDVYLNGSWEHRVCFNL NVSFAFIEGESLMMAVKDLAVSSGSACTSASLEPSYVLRALGRDAELAHSSIRFTLGRFT TEEEIDYAVKCLTKAVKDLREKSPLWEMHQNGEDISKVEWAAH >gi|319803577|gb|ADMF01000045.1| GENE 12 12887 - 13294 645 135 aa, chain + ## HITS:1 COG:NMA1596 KEGG:ns NR:ns ## COG: NMA1596 COG0822 # Protein_GI_number: 15794489 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Neisseria meningitidis Z2491 # 1 125 1 125 128 202 80.0 1e-52 MAYSEKLIDHFEHPRNVGTLDKNAQDVGTGMVGAPACGDVMRLQIKVNPEGVIEDAKFKT YGCGSAIASSSLVSEWVKGKTLEEAGKITNAQIADELALPPVKIHCSILAEDAVKAAIAD YRAKQHPAEQDAKKE >gi|319803577|gb|ADMF01000045.1| GENE 13 13300 - 13623 507 107 aa, chain + ## HITS:1 COG:RSc1021 KEGG:ns NR:ns ## COG: RSc1021 COG0316 # Protein_GI_number: 17545740 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 3 107 2 106 106 166 72.0 1e-41 MSVTLTEAAAKHVQKYLARRGKGVGLRLGVKTSGCSGMAYKLEFADQVEPDDKVWESFGV KVLVDEKSLPYLDGTELDYTREGLQEGFKFHNPNEKSRCGCGESFQI >gi|319803577|gb|ADMF01000045.1| GENE 14 13637 - 14131 572 164 aa, chain + ## HITS:1 COG:RSc1023 KEGG:ns NR:ns ## COG: RSc1023 COG1076 # Protein_GI_number: 17545742 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Ralstonia solanacearum # 2 164 4 169 176 102 43.0 3e-22 MAQMTPFELFGLKPAFKVDLEALHAAHERAILQVHPDRFADRPAAERRVAEQWASRINEA YAVLKDPVKRAVWLCEAAGRSVGAETNTRMPMDFLMQQMAWREAMDDACGDDEKNAVRDE ARGAADKVLEALSSAIDETHDWDKAVDLTRRLMFIERFLEQNAD >gi|319803577|gb|ADMF01000045.1| GENE 15 14222 - 16108 2263 628 aa, chain + ## HITS:1 COG:RSc1024 KEGG:ns NR:ns ## COG: RSc1024 COG0443 # Protein_GI_number: 17545743 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Ralstonia solanacearum # 1 618 1 619 621 708 65.0 0 MALFQIAEPGLSAAPHEHRLAVGIDLGTTNSLAATVKSGEPVVLADEAGRQLLPSVVRYL KDGSVETGWDALAHAESDPRNTVYSAKRLLARGRSELKTLPVLPYEIVDAPGGVAIRTVQ GDKSPVEVSAEILKTLAKRAETQLGGELTGAVITVPAYFDDAQRQATKDAARLANLSVLR LLNEPTAAALAYGLDNGAEGVYLVYDLGGGTFDVSLLKLSRGVFEVLGTGGNAALGGDDF DHAVVDWAVSQLGSVELTAEDRRQLLDRAKAAKEALTDAPETVLKLELSSGTHAFTLTRV IFDQLTKSLVDETLEAVANVLCDAKLEKDQIKGVVLVGGSTRMPCVRREVEAYFGFAPLT GIDPDCVVAVGAAMQANKLAGNAAEGEDWLLLDVTPLSLGIETMGGLVEKIIPRNSPIPV ARAQDFTTFRDGQTAMAVHVVQGEREVVDACRSLARFELRGIPPMAAGAARIRVTFQVDA DGLLSVSAREMTSGVEASIVVKPSYGLTDEEIVRMLQEGNSSAEADMQARKLREEQVEAK RLLESTASALTQDGDLLSPEEQSEIDRLARAVGSAINGTDADMIHKAVEALSKGTEAFAE RRMDRSIRAALAGRSVNDALFDEKPSGS >gi|319803577|gb|ADMF01000045.1| GENE 16 16150 - 16482 413 110 aa, chain + ## HITS:1 COG:HI0372 KEGG:ns NR:ns ## COG: HI0372 COG0633 # Protein_GI_number: 16272320 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Haemophilus influenzae # 1 110 1 110 113 126 58.0 1e-29 MPKITVLPNAELCPEGKTFEAETGANLARALLANGVKIQHACEFNCACATCHVIVRQGFD SLNEPSDNELDHLDTAYGACAESRLSCQTTVGTEDITIEIPKYNRNIVGE >gi|319803577|gb|ADMF01000045.1| GENE 17 16494 - 16694 333 66 aa, chain + ## HITS:1 COG:HI0371 KEGG:ns NR:ns ## COG: HI0371 COG2975 # Protein_GI_number: 16272319 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 3 64 1 62 64 65 59.0 2e-11 MELHWSDVQRIAEELYDADPDLDPLTLSFVKLHDMVVKLPDFADDPQKSNEQILEAILQA WLNERD >gi|319803577|gb|ADMF01000045.1| GENE 18 16847 - 17530 315 227 aa, chain + ## HITS:1 COG:no KEGG:Sca_2067 NR:ns ## KEGG: Sca_2067 # Name: not_defined # Def: hypothetical protein # Organism: S.carnosus # Pathway: not_defined # 29 223 58 258 613 113 30.0 5e-24 MGTAAGLSVFVLGLCLGQSCAAAKEPLPQLLEQKPAVSALAMDALPNRIVVTIKGDPRTS RGFSWFMNAAPDDLNIELSSSSDFAQITRIPVQTMQVQSRFLERTADGHFLFRSEKADST ILGYFTDEGRSVKWRPKDGARKPDHVEIGVLTRPETICRAEVSSLSPGTLWYWRIAAKGK VLSPVGSFKTAADPDKTDEVSFIQVSDTQNAYYNEHKRNEAAYQNEP >gi|319803577|gb|ADMF01000045.1| GENE 19 17631 - 17988 289 119 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKNTRNALDTSLSYAVIGLDLAKADCAVAAVPCADDELGLIDRMDYESLFEQAEKLGP TLFAMEPCCGYSQISLRLQNMGHEVKVISGHAVKNWIARTSQIRKPLLNLKTVESTLSQ Prediction of potential genes in microbial genomes Time: Sun May 29 20:33:19 2011 Seq name: gi|319803569|gb|ADMF01000046.1| Sutterella wadsworthensis 3_1_45B cont1.46, whole genome shotgun sequence Length of sequence - 7809 bp Number of predicted genes - 6, with homology - 5 Number of transcription units - 5, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 360 198 ## - Prom 380 - 439 6.1 - Term 755 - 794 7.3 2 2 Tu 1 . - CDS 854 - 2683 2524 ## SeAg_B4211 arylsulfotransferase 3 3 Tu 1 . - CDS 2862 - 3812 687 ## COG0583 Transcriptional regulator + Prom 4071 - 4130 2.9 4 4 Op 1 1/1.000 + CDS 4266 - 6200 1440 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 5 4 Op 2 . + CDS 6259 - 7443 366 ## COG4178 ABC-type uncharacterized transport system, permease and ATPase components + Term 7652 - 7684 -0.8 6 5 Tu 1 . - CDS 7382 - 7807 278 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319803569|gb|ADMF01000046.1| GENE 1 3 - 360 198 119 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPERWNLREAALC >gi|319803569|gb|ADMF01000046.1| GENE 2 854 - 2683 2524 609 aa, chain - ## HITS:1 COG:no KEGG:SeAg_B4211 NR:ns ## KEGG: SeAg_B4211 # Name: not_defined # Def: arylsulfotransferase # Organism: S.enterica_Agona # Pathway: not_defined # 3 603 7 607 607 872 68.0 0 MRLFAKSLIAASIAAASMGALAMGGGSGPATNYIMQGHIGEVMMNPYGIAPLTAVIRDGG YDLSNVVVKIQPKLNGQTIEYKVSRTELLTHGGVPVFGLYPDYVNMVEVSYTRTLRGKSE NFKDTYQLYAPPTYTEVAGIKAERHALFGTEVKKVDPEFKDRLYFINNIAEKSGIGTRAV WNNPVGGALQWNFFPQNAIIDTAGDIRWYMFANPIYDLRDMYKAGVMMGFKQNDDGLLTW GYGQRYVKYDIMGREVFNRLLPMRYNDYSHSMDDAQNGHYFLRVASSNYIRPDGKHVRTV RDVIAEVDEQGHVIDEWRLPDILDVYRSNVLKVLDQGAVCLNIDAAQAGKTLTAEELSAA EESNDFGDIVGTGAGRNWLHVNSVDYDPEDDSIIISSRHQSAIIKIGRDKKVKWILGSPE GWKGDFTKALLTPVDKNGQKIKCEGSKCEGDFDWTWTQHTAFKIDEKSKGDIIYVSAFDN GDARGMEQPALPDMKYSRAVVYKIDQKKKTVEQVWEFGKERGHELFSAVTSLVEYQPDHD SIVMYSATAGALYDLKTGAFASAPNPTIMEFRWGETTPAVEIQLKDCTGYQAWPFSVEKA FSQEIKPGK >gi|319803569|gb|ADMF01000046.1| GENE 3 2862 - 3812 687 316 aa, chain - ## HITS:1 COG:PA1223 KEGG:ns NR:ns ## COG: PA1223 COG0583 # Protein_GI_number: 15596420 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 19 297 23 293 297 82 27.0 2e-15 MIVNADELKLFRTIYETESLSEAAARLQLSLSKASRQLASLRKTFGDKLFVRCDHRMCPT LRARSLLPKVDALLSGFEALEDPGVFSVEQLRHVFRIAGLDNALLSYFGPVLGALGRHAP GVRLNFHSISSNFYAELHQGRIDLAIYATQESFPTFRRLAICEDAYVYVARGTSELARRV LSGQVLTEREVRARQSVQIALPKASADDCGRIPVIESLDASGQASPVLSAPYFVTVPLLL GAEATTCIPFQTAHALCRTTDLCILGRSKKSSVFTPSFIWSDRVDRDLAHQWLRSFLFSE MRQHLGDLRAVPILRN >gi|319803569|gb|ADMF01000046.1| GENE 4 4266 - 6200 1440 644 aa, chain + ## HITS:1 COG:mlr1155 KEGG:ns NR:ns ## COG: mlr1155 COG1629 # Protein_GI_number: 13471238 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Mesorhizobium loti # 14 558 87 649 747 137 24.0 6e-32 MSVAETVQSLEPVVVTATRVNQPLSEAASSITVVSEKEIAQTQPLTFAEILDTIPNVDTT SSTSVMYNRVSIRGSQPNQITYLIDGMRQDDLTMGGNRPMGVFADPEILKQVEVRNGGGS ALYGNGGIGGTLALETKSAADFLADSDKDFGALVKVGYGSDSISWAKSAYAFGRSDMWDV VAGVTRRDSGAAKTSYKGLRSTADVDNDSTSVFIKATLSPTDNNAATLSYAYDIAHNDSE KGTRFDSYRYEQHRIIGQWEYELDEFINLKTGLQYAQSNFNFENNVPRIFKDKFESFSGN FQNTSRFELFGRHDLTYGLDFSRTEQSGLTKDSGEWADDTSRPDAEGLDAGVFIEDQYKL TNYLAIAPQLRWSYFKRQSNADYPSLSDSKLTPGVTVKLTPIEEVMFWGSVTTGYRPPIL DEMYYRMDYSSWGIQSVVIPNPDLKPEKSVNYEIGTSLDFKNLSGVGDRFTARASVFYDD VKDFINVEVEPDNSGSLPVFTYRAKNLGHVVNKGIELSASYVIDSFKVSASYGYLKSENK DTNERVTGVTPQSANLRTGYRFEEVQLEPWYKLHCAKGGWTSQDKYQGGYATHSVGLTWT PKIPNFYTVRAGIAVDNLTNKKYVSVTDSYGYARSFRAWLSAQF >gi|319803569|gb|ADMF01000046.1| GENE 5 6259 - 7443 366 394 aa, chain + ## HITS:1 COG:PM0041 KEGG:ns NR:ns ## COG: PM0041 COG4178 # Protein_GI_number: 15601906 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease and ATPase components # Organism: Pasteurella multocida # 14 393 16 406 564 225 34.0 1e-58 MIRTTNGGLKRLLLAYLFNRVRWRLWLLFGVVLAAYAFNIKLAVLYNDWNGRFFNALQAV DSDGIFRELLYFIGLAAVIILLLVWAGYLKDRLTLALRRDLTSLFFNRWLSPDSAHYLLR ESGREPDNPDQRITEDVKTLVAYAVSLAVSFYDSLLTIGSFSVILWNLSGSAVLFGFTIP GYMFWTCIIYTLIATAITHFIGRKLKPLNIEAQHREANLRAALIEKHRHSDSIAGARAES VEVAGLKDRLVYLVDVQIALLKRKRDLDLFTVSVGQFTHLAPIFFALPSFLSGSIQLGGL MQIRGAFNDVARSLSWFIMAYDDLMRLAAAYERLQRLEQGLTDADETHCSLAAARIASDV PLAADMTLKTVESTLSQIRRRRARGTSGLWPSSP >gi|319803569|gb|ADMF01000046.1| GENE 6 7382 - 7807 278 141 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 6 134 438 564 570 101 39.0 8e-21 ASPWDALRRYRRRNDIETSYRVVKSDLDGRKPRVWTMTSVRGKEICRHVALGYRFVLQSM MERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMTLKQLLDWFDCVERVEVRNRVAQYR WSTETTARDQMFLELFFDESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:33:37 2011 Seq name: gi|319803561|gb|ADMF01000047.1| Sutterella wadsworthensis 3_1_45B cont1.47, whole genome shotgun sequence Length of sequence - 4300 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 52 - 109 91.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - 5S_RRNA 519 - 590 94.0 # LTTRR5S [D:1..117] # 5S ribosomal RNA # Leptothrix discophora # Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix. - LSU_RRNA 861 - 1839 98.0 # FJ410379 [D:223..2940] # 23S ribosomal RNA # Anaerobiospirillum succiniciproducens # Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Anaerobiospirillum. + LSU_RRNA 2751 - 3222 91.0 # BX571965 [D:3623872..3626753] # 23S ribosomal RNA # Burkholderia pseudomallei K96243 # Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group. - SSU_RRNA 3904 - 4300 99.0 # EF071126 [D:1..1498] # 16S ribosomal RNA # uncultured beta proteobacterium # Bacteria; Proteobacteria; Betaproteobacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Sun May 29 20:33:42 2011 Seq name: gi|319803559|gb|ADMF01000048.1| Sutterella wadsworthensis 3_1_45B cont1.48, whole genome shotgun sequence Length of sequence - 2130 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 84 - 160 89.5 # Ile GAT 0 0 - SSU_RRNA 275 - 1772 99.0 # EF071126 [D:1..1498] # 16S ribosomal RNA # uncultured beta proteobacterium # Bacteria; Proteobacteria; Betaproteobacteria; environmental samples. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Sun May 29 20:33:43 2011 Seq name: gi|319803552|gb|ADMF01000049.1| Sutterella wadsworthensis 3_1_45B cont1.49, whole genome shotgun sequence Length of sequence - 5308 bp Number of predicted genes - 6, with homology - 4 Number of transcription units - 4, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 348 186 ## - Prom 368 - 427 6.1 - Term 400 - 429 -0.5 2 1 Op 2 . - CDS 432 - 827 230 ## 3 1 Op 3 . - CDS 842 - 2155 495 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 4 2 Tu 1 . + CDS 2571 - 4043 1293 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 4114 - 4159 9.7 + Prom 4224 - 4283 5.2 5 3 Tu 1 . + CDS 4350 - 4811 428 ## t3317 transferase 6 4 Tu 1 . - CDS 4830 - 5147 276 ## Ppha_1041 transposase IS4 family protein Predicted protein(s) >gi|319803552|gb|ADMF01000049.1| GENE 1 3 - 348 186 115 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEK >gi|319803552|gb|ADMF01000049.1| GENE 2 432 - 827 230 131 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAVFRLLIIGWLVHSACATSLAAASSLAEPAPLTLSIGISAETANNLPEDLLEKTISSI SADLPETSIKIITLSERELHQKISGREVELFISSAEFFRQNKMQGVRDIAALILQVVKRS LKAQKRSRHFS >gi|319803552|gb|ADMF01000049.1| GENE 3 842 - 2155 495 437 aa, chain - ## HITS:1 COG:L137630 KEGG:ns NR:ns ## COG: L137630 COG1053 # Protein_GI_number: 15673106 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Lactococcus lactis # 2 433 77 495 502 186 30.0 7e-47 MAAEAGIKDIVVLEKEPIVGGSSMISGGQWAVSETELQRRNGILDTDSIFYADMLRIGKN RNDPQLVKKLIQVSREQYNWVLEHGVAPLALSAASGMSRPRAHTFDAVAVMNLLLRMAAR HNIPIITGARATELLMSNGTMHGAAVEYAGSHQRVQANAVLLASGGFARSTELMAKYAPN MQRAAKICGIGSDGDGLLMREAVGAALRDMNFVSASYGFVRTPARISDMTLIYYAGGIIL NQAGKRFVDESLSYKELGTASLTEPGYSTYILFDDAMRREQMRQRPNDWRLWHLIDQGRV PDYVYKADSIEDAAAAAGLNPAVVTSTVEEYNRLAPHGKDPLGRTSLSSGWGTPQEIKSP PFFIMPAVAAVMGTYCGLTITPDAEVLNQKKQIIPGLYAAGEVTGGFHGASYITGTAFAK AHAFGRIAGMAMARRLL >gi|319803552|gb|ADMF01000049.1| GENE 4 2571 - 4043 1293 490 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 13 490 16 478 484 207 31.0 5e-53 MTNRRNFLKASFSAAGAAVAGSAWAVPVKAPSKWDESFDFVIIGAGGAGLSAACHAAEAG LKVLVLEKMSLVGGSSLICGGAWSVGGTELQKSKGIEDSEEKFFADMMKTGQNENDPALV RAFVRASKEEYEWILSKGVKPSTVAIASGMSVPRAHRFDPAAVIAFYLNYAKKLGVDIRL NTPADRLVWDADAGRTAGVRVRNAKQTAFVAARKGVLIAAGGFSRNPQLLAKYAPPMKWA AVIAGMGTTGDGMLLGQDCGADVLDTNYVKASYGFKLNPSSISDMTTIYYAGAIIVNKDA KRFVNESLSYKLLGDEALSQPEHKSWLVFDDAIRRSQMKLRAIDKKLWGGFDEGKTADYY FSGATIEEAAQKAGLNPKVLAETIQQYNETAPQGKDPIGRTSLSSGYGKPVALDHGPYFI MPATAGMIGTYCGLRINDKAQVIGVFGEVIPGLLAAGEATGGVHGAAYMTGTAFGKALAY GRIAARTVAS >gi|319803552|gb|ADMF01000049.1| GENE 5 4350 - 4811 428 153 aa, chain + ## HITS:1 COG:no KEGG:t3317 NR:ns ## KEGG: t3317 # Name: not_defined # Def: transferase # Organism: S.typhi_Ty2 # Pathway: not_defined # 7 152 15 157 607 154 51.0 7e-37 MNYTKSAVLIAAMSLSFAVYAAGGHSGPAVALPIPGKLGEVIVNPYNMAPLTAVIRNGGY VVQDAHVKVLPKMKGQTIEYDVSNGLLMTYAGIPVFGLYPDYVNKVEVSYTRIDGAEKKT ITETYQIYTGPTYANVNGMARFPQPFFDAKVKT >gi|319803552|gb|ADMF01000049.1| GENE 6 4830 - 5147 276 105 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 3 98 471 564 570 74 36.0 9e-13 MTSVRGKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIRSMT LKQLLDWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFDESD Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:01 2011 Seq name: gi|319803546|gb|ADMF01000050.1| Sutterella wadsworthensis 3_1_45B cont1.50, whole genome shotgun sequence Length of sequence - 3281 bp Number of predicted genes - 6, with homology - 1 Number of transcription units - 3, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 338 170 ## - Prom 358 - 417 6.1 - Term 390 - 419 -0.5 2 1 Op 2 . - CDS 435 - 728 246 ## 3 1 Op 3 . - CDS 753 - 959 281 ## 4 1 Op 4 . - CDS 965 - 1183 60 ## - Prom 1217 - 1276 1.9 + Prom 1356 - 1415 1.7 5 2 Tu 1 . + CDS 1503 - 2675 1526 ## COG1454 Alcohol dehydrogenase, class IV + Term 2729 - 2765 2.4 + Prom 2867 - 2926 6.7 6 3 Tu 1 . + CDS 2946 - 3279 219 ## Predicted protein(s) >gi|319803546|gb|ADMF01000050.1| GENE 1 2 - 338 170 112 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVHRAYPNGGT >gi|319803546|gb|ADMF01000050.1| GENE 2 435 - 728 246 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNALGVWGQFFSMAILGLVLWAAVSDLLFRRIPNAAVISIVLVEAAALAAAALGGNGGAA LGLLQSGSVWAVGVLIAGFLLYLPASRQKITQSPETK >gi|319803546|gb|ADMF01000050.1| GENE 3 753 - 959 281 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKISQSLRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDISG AGKNVSIK >gi|319803546|gb|ADMF01000050.1| GENE 4 965 - 1183 60 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRPDRTYLFLGNILNVYWDRRFQGGMQLKIRIYPCNIRFINANDSHKYIYLFATSFEIVY EVNNNGSGGLND >gi|319803546|gb|ADMF01000050.1| GENE 5 1503 - 2675 1526 390 aa, chain + ## HITS:1 COG:TM0111 KEGG:ns NR:ns ## COG: TM0111 COG1454 # Protein_GI_number: 15642886 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Thermotoga maritima # 2 358 3 356 387 242 38.0 1e-63 MKFTFQTPTRLIFGSGRLDALGDEKLPGKKALLLTSRGKSAERTGALERTMNALERAGAE YVYCPMVESNPVVDNVMKAALAAREAECDFVVALGGGSVMDCGKAVAMMATNPGDFWDYV PQGTGGRKPIEIAPLPIVAISTTAGTGSEVDGGGVISNPETKEKIGFGGHPGLYPVLAVV DPELTLSVPPKLTAYQGFDALFHAVEGYLTKRPNYMSDMFALEAVRHIASGLARAVKDGH DLEAREHVSIANTLGGYVMACCRLTSQHALEHALSGECPEMQHGAGLIMLSIAYFSHMIK TGANSMRFIELAHALGVKDAVHPDDFLRALHDLQIACGVADLKMSDYGITRDDIPKLAAK ARSVGAALFEQDAVALTFEDTVSILDSAWR >gi|319803546|gb|ADMF01000050.1| GENE 6 2946 - 3279 219 111 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGG Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:28 2011 Seq name: gi|319803541|gb|ADMF01000051.1| Sutterella wadsworthensis 3_1_45B cont1.51, whole genome shotgun sequence Length of sequence - 2772 bp Number of predicted genes - 3, with homology - 1 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 84 - 494 379 ## + Term 703 - 735 -0.8 2 2 Tu 1 . - CDS 433 - 2199 1200 ## Ppha_1041 transposase IS4 family protein - Prom 2219 - 2278 6.1 3 3 Tu 1 . + CDS 2556 - 2772 123 ## Predicted protein(s) >gi|319803541|gb|ADMF01000051.1| GENE 1 84 - 494 379 136 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKKNTRNALDTSLSYAVIGLDLAKADCAVAAVPCADDELGLIDRMDYESLFEQAEKLGP TLFAMEPCCGYSQISLRLQNMGHEVKVISGHAVKNWIATHKSNQKTDLNLKTVESTLSQI RRRRARGTSGLWPSSP >gi|319803541|gb|ADMF01000051.1| GENE 2 433 - 2199 1200 588 aa, chain - ## HITS:1 COG:no KEGG:Ppha_1041 NR:ns ## KEGG: Ppha_1041 # Name: not_defined # Def: transposase IS4 family protein # Organism: P.phaeoclathratiforme # Pathway: not_defined # 21 581 6 564 570 315 33.0 4e-84 MAARKEFPVKVRRVAVTNKKTGVKYIEERRYQYDPAKGYNVLLSSRRTGEKILEGETVTT RCRPKKKPAEAAQTAELSAKRTRVGALDLIRHAGAVAGLESSVRRAYPNGGTSEKLLSVS QYLVSTGETVHNVEAWQCEHDLPYEAGLSEDICYDLFHELGLDESGSQSLFRELARTAGN DEQPAIAFDSTSHSVYGNGLKPYARQGFNKDGDGLDIYKIITFYSLDSGLPVSFELQPGN IPDVISLVNAVPRAKAYGLKNPEFCLDNGFFSKENVLRFLRKNFKFTILATLKHAWIYKH LDSATDDGTKLRDHFSRYASQCPFDEKISAVSVSEMTPFEWKRQRTRNGVAAGDTESKSF RLYFHYFRNNARAVMEASAFHTKLKSYEMSLAAGKENEMDDAELEFAHRYFSWKRVRGGD IKVIPNEEAILAAQKDFGIFIILSNLHASPWDALRRYRRRNDIETSYRVVKSDLDGRKPR VWTMTSVRGKEICRHVALGYRFVLQSMMERTAQEAERRANDESLGKTVRKQYEKLTAWIR SMTLKQLLDWFDCVERVEVRNRVAQYRWSTETTARDQMFLELFFGESD >gi|319803541|gb|ADMF01000051.1| GENE 3 2556 - 2772 123 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEAVAAVEKLLGVEVASSLMILRDAYKFTMKQINALDKLLDALVEANEQARTMKTVLGI GTQTAARLAVTT Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:45 2011 Seq name: gi|319803534|gb|ADMF01000052.1| Sutterella wadsworthensis 3_1_45B cont1.52, whole genome shotgun sequence Length of sequence - 2033 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 71 - 130 7.0 1 1 Tu 1 . + CDS 156 - 2009 1263 ## COG5421 Transposase Predicted protein(s) >gi|319803534|gb|ADMF01000052.1| GENE 1 156 - 2009 1263 617 aa, chain + ## HITS:1 COG:MA2942 KEGG:ns NR:ns ## COG: MA2942 COG5421 # Protein_GI_number: 20091761 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Methanosarcina acetivorans str.C2A # 246 569 169 484 521 83 25.0 1e-15 MSRKAAVEPKWNFYLDTNKSTGIQYVQTSYNIWVPEKKQPRLGGKAYVGRLFPDGSVRPS KSFLERFPQYADKKLYYFENQLVDREGYLKLNPNAEAQWEELQSQEKTAEQQQEERRESI ENDWRCTARQCGLTSAAWSFLAESDLLKDLEDMLGKEDARVIGALAVYMLDKGVSMNSFA DWLGRVYIPGVQPICGQRLSELLAKIEPDMVDNFFLKRHQRAITKAQARRRELKAKSPKA YIPPLTLAFDSTSISTYSGTIDHAEYGYAKRDPHLKQVNLALACDQDTGEVVYACEYFGS IDDKTSFKPILERMQKVGFDMSETLLITDRGYKSMSNIQKQLDVGLKFLQCTPLNEKSVR ALIDKHSYQLKGIEFYEPKYHCSAVALPTEECESWSQCLPGSGSTQSVKVSVYLYYDDHK AADEKHCEMAAIDRVLELKNAGSQVDAALWQEYRSCVQETQNHKGESVWVRKNQGIAQRL KYSGCMALRTNEVPNPFKALELYRQRNAVECSYRVFKNQIEGDRMLATQTSYRGKLFVFT LATCLRTMMRVKAEAQAKEFDLKIPGNSLSQVFEILRGVTMQRWGSTDSWRINMLTRKQR ECFALFGMTPIKGTRKD Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:46 2011 Seq name: gi|319803531|gb|ADMF01000053.1| Sutterella wadsworthensis 3_1_45B cont1.53, whole genome shotgun sequence Length of sequence - 1891 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 29 - 1744 933 ## COG5421 Transposase - Prom 1765 - 1824 4.8 2 2 Tu 1 . + CDS 1743 - 1890 67 ## Predicted protein(s) >gi|319803531|gb|ADMF01000053.1| GENE 1 29 - 1744 933 571 aa, chain - ## HITS:1 COG:MA2942 KEGG:ns NR:ns ## COG: MA2942 COG5421 # Protein_GI_number: 20091761 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Methanosarcina acetivorans str.C2A # 24 498 19 474 521 62 22.0 2e-09 MGRPLTGKTHVGIRRETRSNGDVYVYERVTGYDPKTQKTKTLSTRLLGKILAGSTEMIPT RPKKKRSEVIEAPVQAVRTHVGLQKILEWAGHESGIDADLQRSFEIGDALKLSSIARYWV ATDGDTLPRMESWQVMNPLPYGHPITQDVYGKLFASVGRNESGVQSYFQCRGQRVSSTGL NLALDTTTFSTYSKNQIEARQGFNKDGDGLDTIKLLVLYSVENRQPVAFSKQPGNIPDKI SLANALRQLDMLDLASPVIVADNGFYSQDNMTHFAREHTKFLMLANSTDKWVRSEIDAAR EELGHFRNVCPFDVDVSGVMRRRQHGFSIVRKRTRGNFEAGETESFTRRLYVHVFHKPEA APIQERRLRESLFSLKKDLEDGVEEFRPAAQKQIDSYLTVKRTAKGVKVDFKMDGIEEAK RYWGYFVLVSNEIKDPFDALKAYRSREKIEELFATYKDSFDGRKPRTWYPENLYGRQFAQ FVGLGYHCFLAKRILDVKKALSEKETEGKTKEELSLEAKLLAWLNQHSLIQILDWFRCVD YVAATGNASASKWTTETTRRDQLFLKMLGVK >gi|319803531|gb|ADMF01000053.1| GENE 2 1743 - 1890 67 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSISNNALIFYHTYTIESKKKSVYFTDFSIKTSFSLEYRDGFERLLGFY Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:51 2011 Seq name: gi|319803526|gb|ADMF01000054.1| Sutterella wadsworthensis 3_1_45B cont1.54, whole genome shotgun sequence Length of sequence - 1878 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 63 - 122 8.2 1 1 Tu 1 . + CDS 146 - 1864 1012 ## COG5421 Transposase Predicted protein(s) >gi|319803526|gb|ADMF01000054.1| GENE 1 146 - 1864 1012 572 aa, chain + ## HITS:1 COG:MA2942 KEGG:ns NR:ns ## COG: MA2942 COG5421 # Protein_GI_number: 20091761 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Methanosarcina acetivorans str.C2A # 168 518 134 477 521 76 25.0 2e-13 MSSSPKPWSFSTYTDADGRTYVYGYRNRWDPEKKQSRIEKRCHVGRLDPQTGQVHLGRKF LTNNPEYAGKFWLYDNNQLIEQEPFEQPDTDNEPQPSWRGEDVELGLTWAAWQFAVDHGL LEDLQETFGEDTGTELLRFAIYRLCGEDSGMMNYADWLALVWLPQAQPLSSQRISEQLAV VDQSLMDRYFKRRHDRLLKARQKVSAADIPQFLALDSTSISTYSETIASAAYGHARQDPH LRQVNLSLGVDYETGDVCYAYESEGSTNDKQLYLAIVQRMIDHQFDLSNTVLVTDRGYHS LMNMQKLINLELKFVQGVTRAEDSVRRLFDQHRVSLDDPTFTDGRLEVAAYTTTEMWQED GAAGRQHIHNTLHLYQDGCLRAEQKRVFLKNLDETIDRLNQGKKVDSEQLREMHRYLVKK EPQHWMRNAAAVADACRYMGNFVIRTNVVQDPFIALSIYRARNIVEQSFQQFKNQTAGDR LYATSSTYMGKLFVQILAQSLRLMMRMACRRNETATNRLPSNSLTKAFMQLRYLKANKPT DRNAWKTKEIPKKIRDLFTLLGLPLPPRVFRD Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:52 2011 Seq name: gi|319803521|gb|ADMF01000055.1| Sutterella wadsworthensis 3_1_45B cont1.55, whole genome shotgun sequence Length of sequence - 1823 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 92 - 1297 633 ## COG3547 Transposase and inactivated derivatives + Term 1397 - 1429 0.1 Predicted protein(s) >gi|319803521|gb|ADMF01000055.1| GENE 1 92 - 1297 633 401 aa, chain + ## HITS:1 COG:PA0445 KEGG:ns NR:ns ## COG: PA0445 COG3547 # Protein_GI_number: 15595642 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Pseudomonas aeruginosa # 14 367 1 330 338 94 27.0 4e-19 MSKKNTRNALDTSLSYAVIGLDLAKADCAVAAVPCADDELGLIDRMDYESLFEQAEKLGP TLFAMEPCCGYSQISLRLQNMGHEVKVISGHAVKNWIATHKSNQKTDLNDATALAKLALY DHDLQPIRVKNVEECRIASVQAIRIQLRTQATKSLVCFKSLCQCWGIVIRRGSLNTKKMA EAVAAVEKLLGVEVASSLMILRDAYKFTMKQINALDKLLDALVEANEQARTMKTVLGIGT QTAARLAVTTGDIKRFPMPRSYVAYFGLAPRNIITGHSGTPSPSKRGALKPVSSRGQGKV SRRGDRVARSFIIQGAATIYMLYCKDMLPECQLRRWLHEQIKRGKPYGKIIVSLAAKLLR IVWALLTYGEKFDSHKAGVPRSVLAAMEKPLKHDAAAESAA Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:52 2011 Seq name: gi|319803510|gb|ADMF01000056.1| Sutterella wadsworthensis 3_1_45B cont1.56, whole genome shotgun sequence Length of sequence - 1128 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1126 1513 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|319803510|gb|ADMF01000056.1| GENE 1 2 - 1126 1513 375 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 375 20 405 407 587 75 1e-168 HVDHGKTTLTAAICTTLAKHFGGEAKAYDQIDAAPEEKARGITINTAHVEYETANRHYAH VDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIIVYLNKCD MVDDEELLELVEMEVRELLSKYDFPGDDIPIIKGSAKLALEGDQSPIGEPSILKLAETLD TYIPTPERAVDQPFLMPIEDVFSISGRGTVVTGRVERGVIKVGDEIEIVGIKPTTKTTCT GVEMFRKLLDQGQAGDNVGILLRGTKREEVERGQVLAKPGSITPHTHFKGEVYVLTKDEG GRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNITMTVKLICPIAMEQGLRFAI REGGHTVGAGVVAQI Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:53 2011 Seq name: gi|319803507|gb|ADMF01000057.1| Sutterella wadsworthensis 3_1_45B cont1.57, whole genome shotgun sequence Length of sequence - 918 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 751 519 ## Amet_0623 transposase, IS4 - Prom 784 - 843 7.8 Predicted protein(s) >gi|319803507|gb|ADMF01000057.1| GENE 1 1 - 751 519 250 aa, chain - ## HITS:1 COG:no KEGG:Amet_0623 NR:ns ## KEGG: Amet_0623 # Name: not_defined # Def: transposase, IS4 # Organism: A.metalliredigens # Pathway: not_defined # 19 250 12 212 535 68 25.0 2e-10 MMKKASNKWYFTKETNAKGLCYIYAYQTQWDPVAKKSKRSARKYVGRLAADSVVNITAKF RTEFPQYAQGTFYFGLDKTLVDETAYRRDFPDAPGPKPAEAEIDTALWDTRSLGFTWALE QLAAQSQVLEHLREIFKEDARSLLNLAIYKLDGGNSMAAMEDWRASVYLPHGPALKSQRI SEVLSRVTPKDFDRYFHLRHQSKIERMSGADCVHYALDNTTISSYSATIADVAYGHAKRD PELPVLNFTF Prediction of potential genes in microbial genomes Time: Sun May 29 20:34:57 2011 Seq name: gi|319803501|gb|ADMF01000058.1| Sutterella wadsworthensis 3_1_45B cont1.58, whole genome shotgun sequence Length of sequence - 835 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 119 - 833 610 ## gi|302858921|gb|EFL82007.1| transposase, IS4 family protein Predicted protein(s) >gi|319803501|gb|ADMF01000058.1| GENE 1 119 - 833 610 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|302858921|gb|EFL82007.1| ## NR: gi|302858921|gb|EFL82007.1| transposase, IS4 family protein [Burkholderiales bacterium 1_1_47] # 5 238 294 523 584 169 37.0 2e-40 MKDAGFDFSKVILVTDRGYQSLINIQKQIDLEVKFIQGIRLSEDIVKRSFDRYDASLHNQ RFYDTGERVYAHSTTEAWKQYTDYGSLNKTLHLHLYRFPKADEAEMEELRLQVQQVLDLK NANKQVPPEKWLTYKRFVCERTTAQGHRYWDRDDNAIEAALRYAGRFAIRTNAEANPFKA LSIYRLRGQVEQDFNQFKNWVDGNRLRCTDTAYWGKLLVCTLATSLRMMAIKGAHDRE Prediction of potential genes in microbial genomes Time: Sun May 29 20:35:07 2011 Seq name: gi|319803495|gb|ADMF01000059.1| Sutterella wadsworthensis 3_1_45B cont1.59, whole genome shotgun sequence Length of sequence - 814 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 13 - 814 1025 ## COG0281 Malic enzyme Predicted protein(s) >gi|319803495|gb|ADMF01000059.1| GENE 1 13 - 814 1025 267 aa, chain + ## HITS:1 COG:YPO1511 KEGG:ns NR:ns ## COG: YPO1511 COG0281 # Protein_GI_number: 16121784 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Yersinia pestis # 8 265 67 324 565 282 54.0 6e-76 MREMLNRFEKPIDKALLLDSIRNTNEDLFFQLLTRYTAEYMPVVYTPTVGEYCQRFSHIF RYPRGLFVSLEHLGHVREVIERAPNKEVDVIVVTDGERILGLGDQGLNGMGIPCGKLALY TACAGIAPEKTLPVVLDVGTNREEYLNDPLYLGLRQKRCRGPEYRQLVDEFIAEARRRWP NVLIQFEDFGNANAFKLLSDYQEKILCFNDDIQGTASVVVSGMYSAVRVKGEKMADQKFL FFGAGEAACGIANLLADALIDDGLSRE Prediction of potential genes in microbial genomes Time: Sun May 29 20:35:08 2011 Seq name: gi|319803492|gb|ADMF01000060.1| Sutterella wadsworthensis 3_1_45B cont1.60, whole genome shotgun sequence Length of sequence - 805 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 805 493 ## COG5421 Transposase Predicted protein(s) >gi|319803492|gb|ADMF01000060.1| GENE 1 1 - 805 493 268 aa, chain - ## HITS:1 COG:MA3502 KEGG:ns NR:ns ## COG: MA3502 COG5421 # Protein_GI_number: 20092312 # Func_class: L Replication, recombination and repair # Function: Transposase # Organism: Methanosarcina acetivorans str.C2A # 6 186 90 266 517 68 28.0 8e-12 VREIFKEDARSLLNLAIYKLDGGNSMAAMEDWRASVYLPHGPALKSQRISEVLSRVTPKD FARYFHLRHQSKIERMSGTDCVHYALDNTTISSYSATIADVAYGHAKRDPELPVLNFTFV CDQDSGDIVFAHAYEGSIPDVTAFGEIVFRMKDAGFDFSKVILVTDRGYQSLINIQKQID LEVKFIQGIRLSEDIVKRSFDRYDASLHNQRFYDTGERVYAHSTTEAWKQYTDYGSLNKT LHLHLYRFPKADEAEMEELRLQVQQVLD Prediction of potential genes in microbial genomes Time: Sun May 29 20:35:09 2011 Seq name: gi|319803486|gb|ADMF01000061.1| Sutterella wadsworthensis 3_1_45B cont1.61, whole genome shotgun sequence Length of sequence - 501 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 500 241 ## Mhun_1523 transposase, IS4 Predicted protein(s) >gi|319803486|gb|ADMF01000061.1| GENE 1 2 - 500 241 166 aa, chain - ## HITS:1 COG:no KEGG:Mhun_1523 NR:ns ## KEGG: Mhun_1523 # Name: not_defined # Def: transposase, IS4 # Organism: M.hungatei # Pathway: not_defined # 1 158 81 233 536 78 29.0 1e-13 GFTWALEQLAAQSQVLEHLREIFKEDARSLLNLAIYKLDGGNSMAAMEDWRASVYLPHGP ALKSQRISEVLSRVTPKDFARYFHLRHQSKIERMSGTDCVHYALDNTTISSYSATIADVA YGHAKRDPELPVLNFTFVCDQDSGDIVFAHAYEGSIPDVTAFGEIV