Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:42:38 2011 Seq name: gi|292596547|gb|ADCV01000001.1| Veillonella sp. 3_1_44 cont1.1, whole genome shotgun sequence Length of sequence - 58501 bp Number of predicted genes - 54, with homology - 50 Number of transcription units - 29, operones - 14 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 551 - 598 7.0 1 1 Tu 1 . - CDS 599 - 808 401 ## COG3585 Molybdopterin-binding protein - Prom 839 - 898 13.1 - TRNA 897 - 970 65.4 # Gly CCC 0 0 + Prom 815 - 874 5.0 2 2 Op 1 . + CDS 1109 - 2440 771 ## COG3182 Uncharacterized iron-regulated membrane protein 3 2 Op 2 2/0.000 + CDS 2514 - 3695 859 ## COG3004 Na+/H+ antiporter 4 2 Op 3 . + CDS 3731 - 4903 1038 ## COG3004 Na+/H+ antiporter + Term 4987 - 5025 2.5 + Prom 5006 - 5065 9.2 5 3 Tu 1 . + CDS 5166 - 5774 571 ## COG3584 Uncharacterized protein conserved in bacteria + Prom 5862 - 5921 7.4 6 4 Tu 1 . + CDS 6001 - 6819 825 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Prom 6859 - 6918 4.5 7 5 Op 1 11/0.000 + CDS 6951 - 8324 1807 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) + Prom 8334 - 8393 6.4 8 5 Op 2 1/0.000 + CDS 8452 - 9405 1261 ## COG0462 Phosphoribosylpyrophosphate synthetase 9 5 Op 3 . + CDS 9416 - 9994 492 ## COG0193 Peptidyl-tRNA hydrolase + Term 10007 - 10047 10.6 10 6 Op 1 4/0.000 + CDS 10052 - 11533 1363 ## COG1982 Arginine/lysine/ornithine decarboxylases 11 6 Op 2 22/0.000 + CDS 11536 - 12222 570 ## COG0125 Thymidylate kinase + Term 12228 - 12261 3.4 12 6 Op 3 7/0.000 + CDS 12298 - 13338 1193 ## COG0470 ATPase involved in DNA replication 13 6 Op 4 1/0.000 + CDS 13339 - 14184 835 ## COG1774 Uncharacterized homolog of PSP1 14 6 Op 5 1/0.000 + CDS 14177 - 14902 544 ## COG4123 Predicted O-methyltransferase 15 6 Op 6 1/0.000 + CDS 14892 - 15740 795 ## COG0313 Predicted methyltransferases 16 6 Op 7 8/0.000 + CDS 15775 - 17721 2212 ## COG0143 Methionyl-tRNA synthetase 17 6 Op 8 . + CDS 17721 - 18491 830 ## COG0084 Mg-dependent DNase + Term 18518 - 18551 -0.4 + Prom 18618 - 18677 7.5 18 7 Op 1 . + CDS 18714 - 20261 1397 ## COG0248 Exopolyphosphatase 19 7 Op 2 11/0.000 + CDS 20261 - 21826 1140 ## COG0248 Exopolyphosphatase 20 7 Op 3 . + CDS 21816 - 23933 1874 ## COG0855 Polyphosphate kinase + Term 23985 - 24028 7.0 + Prom 24080 - 24139 8.8 21 8 Tu 1 . + CDS 24359 - 25336 1385 ## COG3584 Uncharacterized protein conserved in bacteria + Term 25349 - 25387 7.2 - Term 25419 - 25454 6.7 22 9 Op 1 . - CDS 25459 - 26397 948 ## COG0225 Peptide methionine sulfoxide reductase 23 9 Op 2 . - CDS 26398 - 27519 1464 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 27562 - 27621 9.2 - Term 27718 - 27751 -0.9 24 10 Tu 1 . - CDS 27773 - 28711 1133 ## COG0583 Transcriptional regulator - Prom 28736 - 28795 10.0 + Prom 28739 - 28798 6.7 25 11 Op 1 7/0.000 + CDS 28818 - 29345 683 ## COG1658 Small primase-like proteins (Toprim domain) 26 11 Op 2 . + CDS 29359 - 30213 960 ## COG0030 Dimethyladenosine transferase (rRNA methylation) + Term 30227 - 30279 12.1 - Term 30269 - 30297 1.0 27 12 Tu 1 . - CDS 30305 - 31552 1607 ## COG0786 Na+/glutamate symporter - Prom 31762 - 31821 10.9 - Term 31810 - 31873 11.2 28 13 Tu 1 . - CDS 31999 - 33594 2351 ## COG4108 Peptide chain release factor RF-3 - Prom 33662 - 33721 5.3 + Prom 33663 - 33722 6.5 29 14 Tu 1 . + CDS 33773 - 36094 2101 ## COG0550 Topoisomerase IA + Term 36120 - 36174 13.2 - Term 36108 - 36160 14.4 30 15 Op 1 . - CDS 36217 - 37515 1428 ## COG0513 Superfamily II DNA and RNA helicases - Prom 37541 - 37600 10.4 31 15 Op 2 . - CDS 37732 - 37824 69 ## - Prom 37889 - 37948 7.3 + Prom 37924 - 37983 13.2 32 16 Op 1 22/0.000 + CDS 38055 - 38288 439 ## COG1918 Fe2+ transport system protein A 33 16 Op 2 . + CDS 38298 - 40670 2658 ## COG0370 Fe2+ transport system protein B + Term 40806 - 40859 2.0 + Prom 40747 - 40806 7.8 34 17 Tu 1 . + CDS 40902 - 41108 394 ## gi|238019579|ref|ZP_04600005.1| hypothetical protein VEIDISOL_01448 + Term 41134 - 41170 1.0 + Prom 41134 - 41193 7.6 35 18 Op 1 . + CDS 41213 - 41473 526 ## Vpar_0634 hypothetical protein 36 18 Op 2 . + CDS 41488 - 43626 2977 ## COG2217 Cation transport ATPase + Term 43633 - 43684 14.5 + Prom 43659 - 43718 7.2 37 19 Tu 1 . + CDS 43743 - 44147 425 ## Vpar_0636 hypothetical protein + Term 44218 - 44262 -1.0 38 20 Tu 1 . - CDS 44115 - 44327 247 ## - Prom 44544 - 44603 6.5 + Prom 44175 - 44234 2.6 39 21 Op 1 . + CDS 44275 - 44982 563 ## Vpar_0637 hypothetical protein 40 21 Op 2 . + CDS 45032 - 45793 826 ## COG4684 Predicted membrane protein + Prom 45807 - 45866 8.6 41 22 Tu 1 . + CDS 45894 - 46037 245 ## + Term 46039 - 46077 6.8 + Prom 46095 - 46154 7.9 42 23 Op 1 . + CDS 46204 - 47613 1617 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 43 23 Op 2 . + CDS 47649 - 49928 1729 ## COG0068 Hydrogenase maturation factor 44 24 Tu 1 . - CDS 49991 - 50089 62 ## - Prom 50337 - 50396 3.8 + Prom 50076 - 50135 6.4 45 25 Op 1 13/0.000 + CDS 50162 - 50413 446 ## COG0298 Hydrogenase maturation factor 46 25 Op 2 4/0.000 + CDS 50469 - 51491 1117 ## COG0409 Hydrogenase maturation factor 47 25 Op 3 . + CDS 51493 - 52500 1030 ## COG0309 Hydrogenase maturation factor + Prom 52682 - 52741 6.9 48 26 Tu 1 . + CDS 52762 - 53208 700 ## Vpar_0645 hypothetical protein + Term 53242 - 53287 10.8 + Prom 53222 - 53281 1.8 49 27 Op 1 . + CDS 53317 - 54429 1500 ## Vpar_0646 hypothetical protein 50 27 Op 2 . + CDS 54467 - 56020 1661 ## Vpar_0647 hypothetical protein 51 27 Op 3 . + CDS 56034 - 56897 1122 ## COG1210 UDP-glucose pyrophosphorylase + Term 56920 - 56963 8.5 + Prom 56984 - 57043 9.9 52 28 Op 1 . + CDS 57071 - 57637 493 ## Vpar_0649 hypothetical protein 53 28 Op 2 . + CDS 57646 - 58158 187 ## PROTEIN SUPPORTED gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 + Term 58173 - 58202 0.5 + Prom 58189 - 58248 1.7 54 29 Tu 1 . + CDS 58344 - 58500 81 ## COG1943 Transposase and inactivated derivatives Predicted protein(s) >gi|292596547|gb|ADCV01000001.1| GENE 1 599 - 808 401 69 aa, chain - ## HITS:1 COG:HI1370 KEGG:ns NR:ns ## COG: HI1370 COG3585 # Protein_GI_number: 16273280 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-binding protein # Organism: Haemophilus influenzae # 1 69 1 69 69 60 59.0 5e-10 MKLSARNQLKGTIVEIQEGAVNAIVKINVGNNNIVTADITIQSVKELGLAVGKEVVAVIK STSVMVGVE >gi|292596547|gb|ADCV01000001.1| GENE 2 1109 - 2440 771 443 aa, chain + ## HITS:1 COG:CC2927 KEGG:ns NR:ns ## COG: CC2927 COG3182 # Protein_GI_number: 16127157 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Caulobacter vibrioides # 7 374 44 390 394 88 24.0 3e-17 MSKVYKVHKWLSIISLIFFLMFCITGLVLMFRTELNAWAQGGTTHHSSAIMSMNEHEESI FKYADQGALLVKQKYPSKDILNISPAMGATHILRYRIIESTATVAPPARMGMGGDYVLYN PISKELITSHNEPPVHPWIRSMLHTLHQLHTRLDLGKIGIYIVTFLSFLCSLTIISGIFL YGPFRKSYSKASVLSKKMKIGALHREFSIVATVWGFILCITGVWIGGFFIANDNYNADVL HNAKQELSIGQSEILQPSEAISRIMKVYPDRQVISMDYPSKFNNYHYAFYLGAENDDDPA MFLGQPVYANLYVDSSNDRFSTKAVPWYFTGMTTMINLHIHNHNTMALKILWAIWDIVLI IGIVTGLMMTIIRKYKKSDVILSKVSVEEKHIWRTPLFCSISVLIGLLLPLWQNPVMNTI AAICLTVSLIVFFISLLKESKQY >gi|292596547|gb|ADCV01000001.1| GENE 3 2514 - 3695 859 393 aa, chain + ## HITS:1 COG:CC0450 KEGG:ns NR:ns ## COG: CC0450 COG3004 # Protein_GI_number: 16124705 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Caulobacter vibrioides # 20 382 19 383 413 323 47.0 4e-88 MTQKVVVIMNFIKAFFQSESAGGISLLSAAILGVLVANSPIAAQYFAVMQIHLGPMTILE WVNDALMALFFLYVGIEIKKEMISGELDTKAKRVLPVLAAFAGVITPAIVYYFAAGYMPE YRHGWGIPTATDIAFAIGVITMLGNKVSTAMKAFLAALAIIDDLIAIVVIALFYGAGVNF MDLIAAAAVTGLLIYTNKQGYLRPLPYCVLGLVLWYLVLKSGVHATIAGVVLAMTIPFKG KVIDKVVYPMEEWAHALRNWVNFLIIPLFSFLNAGVSFADFSIDNLFHPVIIGVSFGLIL GKQLGIFSAVYILVQSKAIKMPTKTTWPEIYGTAILCGIGFTMSLFVATLAFPPGITQEM AKVGIFIGSITAGLLGAIVLILAYQIRKMRGKI >gi|292596547|gb|ADCV01000001.1| GENE 4 3731 - 4903 1038 390 aa, chain + ## HITS:1 COG:CC0450 KEGG:ns NR:ns ## COG: CC0450 COG3004 # Protein_GI_number: 16124705 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Caulobacter vibrioides # 12 374 18 383 413 328 48.0 1e-89 MERIFVFLRSPGAATSVLLGATVLALILANSPSSEQYFQIVNHHIGNLTILEWVNDALMA IFFLFVGLEVKRELVSGELNTNAKRVMPGIAALFGVLTPAFIYYLIAGFHSEYIHGWAIP TATDIAFSIGIISALGSRVPNSMKVFLTALAVIDDLIAIIVIAIFYASSIHMMYLGAAVV VVAALIYCNKQGYVRPLPYIILGFILWYCVLKSGLHATMAGVILAMTIPSKGKRGRKYVR PMQHWEHLLSNWVSFLIVPIFAFFNAGVDLRNVSVNDLTHPVVLGVALGLIIGKQIGIFG AVFAMVKCGLVPMPTEANWKHVYGTAIVCGIGFTMSIFVSILAFEPGHAQEMAKGGVILG SLTSALFGYIFLRLVGANRKECHIGVYHNC >gi|292596547|gb|ADCV01000001.1| GENE 5 5166 - 5774 571 202 aa, chain + ## HITS:1 COG:BH3322_2 KEGG:ns NR:ns ## COG: BH3322_2 COG3584 # Protein_GI_number: 15615884 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 114 202 18 110 111 90 50.0 3e-18 MIKKIIITCTLVCMIVMVSSVSLAKTIDRGQRGHHVSKVQTMLKHQGFLHDSIDGIYGHN TEQAVRKFQKSKGLPVDGRVGPATMNALEKMETRYGGHGTERNHNGVPNKYSKVLTMEAS GYSSQDPGNGKYTATGSRLRKGLVSVDPKLIPLGTRLYIEGYGYAVADDVGGAIKGHRID LAFDSRAEALQFGRQSVKVYIL >gi|292596547|gb|ADCV01000001.1| GENE 6 6001 - 6819 825 272 aa, chain + ## HITS:1 COG:BS_purR KEGG:ns NR:ns ## COG: BS_purR COG0503 # Protein_GI_number: 16077115 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Bacillus subtilis # 3 266 2 265 285 243 46.0 3e-64 MDKVRRVERMVAMTKLLVDSPQKLIPLNYFCDFFGMAKSTVSEDLTCVRQSMEHFQLGTL ETVAGVAGGVRFIPHRKGTQANDILRDVQARLMEPDRIIPGGFIYMSDILYDWHVMTRLG EIIMTRFVNREPDYILTVETKGIPLAVMVARAFNKPLVIARRDSKVTEGSAISINYVTGS SGRIQTMTLTKRAIPPNAKVLIIDDFMKAGGTAKGLKELVLEMSGVVVGTGVLVATAEPS PKLIDDYESLFTFYGIDENTKKISIEPVLDEE >gi|292596547|gb|ADCV01000001.1| GENE 7 6951 - 8324 1807 457 aa, chain + ## HITS:1 COG:BS_gcaD KEGG:ns NR:ns ## COG: BS_gcaD COG1207 # Protein_GI_number: 16077118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Bacillus subtilis # 5 449 6 450 456 475 52.0 1e-134 MNIASLILAAGKGTRMKSKLPKVLHKVGGKAMVERVLETVQSIGTNRDVVIVGFGGDAVQ NYLGERAEFVRQEEQNGTGHAVKMAQPVLGDYDGTILLLCGDTPLVTKESLEALLEEHKN SGAAATILTAHMPDPTGYGRIIRNEAGSVVRIVEQKDGKPEELAVQEVNTGMYAFDSKKL WPCLDQLSDDNAQGELYITDVVGILVNGGDKVSAYMTKDFEESLGVNSRLQLAEAEAILK HRKNVELMTAGVTIIDPENTYVAPEVTVGADTILHPGTILEGDTVIGERCEIGPHTRLTN VKVGNDTIIHFTYGHDCEVKDGVDVGPYAHLRPNTVLGNKVHVGNFVEVKNSIVGEGTKF PHLSYIGDSDVGAGVNIGCGTITVNYDGKVKHRTTIGDGAFVGCNSNLVAPVTIGNYSYV GAGSTITKNVPDKALAVGRSKQIVKENWVTEDTFKKK >gi|292596547|gb|ADCV01000001.1| GENE 8 8452 - 9405 1261 317 aa, chain + ## HITS:1 COG:BS_prs KEGG:ns NR:ns ## COG: BS_prs COG0462 # Protein_GI_number: 16077119 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Bacillus subtilis # 7 315 8 316 317 387 62.0 1e-107 MAFEDGKKLKIFTGNANPALAKEICDYLGLPLGEAFVGRFNNGEVQIMIDESVRGKDVFI IQPTSYPVNDNLMELMVMADALKRASARHITAVVPYYGYARQDRKTRGREPITAKLVANL MQTAGITRLVTIDLHAGQIQGFFDVPVDHLFGASILAKYINEKNMEDIIVVSPDLGGVTR ARDLADRIGAPIAIIEKKRPEPGVAKVMNLIGDVAGKNCIIIDDIVDTAGSLVEGAKALE EFGAKSVTAAVTHAVLTDPASERIANSNIKELIVTNTIPLPENCNLPNITQLSVAPLLGE AIMRIFHEVSVSNLFDK >gi|292596547|gb|ADCV01000001.1| GENE 9 9416 - 9994 492 192 aa, chain + ## HITS:1 COG:BS_spoVC KEGG:ns NR:ns ## COG: BS_spoVC COG0193 # Protein_GI_number: 16077121 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Bacillus subtilis # 1 187 1 187 188 188 49.0 5e-48 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVK PQTFMNLSGESVGPLMRYYKIDPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLISH IGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDKG MNQFNPKRRPRR >gi|292596547|gb|ADCV01000001.1| GENE 10 10052 - 11533 1363 493 aa, chain + ## HITS:1 COG:FN0501_1 KEGG:ns NR:ns ## COG: FN0501_1 COG1982 # Protein_GI_number: 19703836 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Fusobacterium nucleatum # 3 493 5 489 503 362 40.0 1e-99 MSNQEKMPFVEALESYKEQHFVPFHTPGHKIGVEAPQLLKNWMGPALSYDLGVMYALDDL HEPERELKEAQDLTAELYGADCCWFSINGTTALIEAMIMGTVGPDETIIIPREAHRSVIS GLVLSGAKPVYMGCDFDERWGIPLGVSLENAIKSMDAHPEAKAILLVYPNYYGVGIDIVN IIQEAHKRELIVLVDEAHGPHLPFSESLPIEATEAGADLVAQSTHKSVGSLTQTSWLLGQ GKKIDKRRITQMHQMLQSTSPNYIFLASLDMARHQLATAGNDLVSRAVELSMYLREELNK ISGIAAMEYTDIQERVINYDCTKVLIDAKELGLTGVEFERMLREHHIEVELVQAHHVLVL ITIGDTKESVTALIKAVQAVSEKVLRAFKEFNKTEEEQLQDISKDSALLPAPIVRITPRN AMYANREQVPLKEALHRIAGETIAYYPPGIPCVAVGEEISASVLQYIENRKALGFVPNGA DDMTLETIWVLQE >gi|292596547|gb|ADCV01000001.1| GENE 11 11536 - 12222 570 228 aa, chain + ## HITS:1 COG:FN1323 KEGG:ns NR:ns ## COG: FN1323 COG0125 # Protein_GI_number: 19704658 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Fusobacterium nucleatum # 1 227 1 223 225 199 43.0 5e-51 MGTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYNSGAAMPIKMYLAGEFGKD VHDVNPYVASSMYAIDRFASFRTDWEQFYNNGGIIIADRYTTSNMVHQMVKYDDLKERTA FLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEVLMAERTGKTGGNTGDIHEGNHAYLVAV HDAYEELVKRYQWHRIPCADKAKSSQYTLRTIEEIHNDVYGVVENLLP >gi|292596547|gb|ADCV01000001.1| GENE 12 12298 - 13338 1193 346 aa, chain + ## HITS:1 COG:RSc1785 KEGG:ns NR:ns ## COG: RSc1785 COG0470 # Protein_GI_number: 17546504 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Ralstonia solanacearum # 23 320 18 313 336 77 28.0 3e-14 MTYFDSIIGQDSIKAHLSELVSRNALPHSLLFHGESGLGKLDMAIGLASLLLGRQVFSQP KGESYLAEVKEARLANGDTEKRIEAEGLPIYMDKGDAFWIRPMKTTLKVEQWYSLLQDHL SVAGNGNRVVIVEDFHTANAVMANAMLKTIEEPPEQVYFIIITNKINTVLPTIISRCMGV GFNSVDVDTIRTALVARGITGDIEQALLAGHGNPQLVEKLATQGRIEMLELAVKVMDILA FETRWFSMISLACESLSRESLTELMHWLRLVSRDMMALKMGAQDTQLQVPIYKTQLLRLL PRWSMQALAKVITETLQAERALCLHIKTALVVDGLSIALHDAREED >gi|292596547|gb|ADCV01000001.1| GENE 13 13339 - 14184 835 281 aa, chain + ## HITS:1 COG:BH0045 KEGG:ns NR:ns ## COG: BH0045 COG1774 # Protein_GI_number: 15612608 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus halodurans # 1 269 1 255 275 314 59.0 1e-85 MLTIVGVRFKKAGKIYYFQPEQLELSVGDGVIVETARGVEYGTVVIGPKEVYEDSVVAPV KPVIRQATSKDLKQIEKNKEREEKAFEICLEKIEKRKLPMKLINVEYTFDMNKIIFFFTA DGRIDFRELVKDLATIFRTRIELRQVGVRDEAKVLNGIGACGRPLCCSNFLGDFTPVSIR MAKDQNLSLNPTKISGVCGRLMCCLNYEDDLYKKGGDLYVKKERTQSPQDIAPPGIGKEV VTDEGIGKVLKVNHHKHTVKVQLEAGRTIDLKWSEVALPDE >gi|292596547|gb|ADCV01000001.1| GENE 14 14177 - 14902 544 241 aa, chain + ## HITS:1 COG:CAC0306 KEGG:ns NR:ns ## COG: CAC0306 COG4123 # Protein_GI_number: 15893598 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 5 241 8 244 244 135 33.0 1e-31 MNDQERLDDLIIDGLQIYQRSDMFRFSFDAIALIHFCRFNGRHTYVDLGTGSGVMPLIGT SLGAGHITGIEINETLVELAKRSVEHNRKQDVVNMLCGDYRHMTYRDIQDKPFDGVIVNP PFYDCESGAKPTSEERTLALHDGHTTLCDVLKAVQSFIKCKGRLWMIYSASRLQYVLHEL ERFNFQAKRIRFVHGMLDKPAKLVLIESIFQGQAGLVLEPPLIVYKKTNVYTKEVSSWYE R >gi|292596547|gb|ADCV01000001.1| GENE 15 14892 - 15740 795 282 aa, chain + ## HITS:1 COG:BH0049 KEGG:ns NR:ns ## COG: BH0049 COG0313 # Protein_GI_number: 15612612 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Bacillus halodurans # 7 279 14 285 289 285 55.0 5e-77 MNDNEWGALYLVPTPIGNLEDMTYRSVRILGEVDAIAAEDTRHTGILLKHFDIKKPLISY HEHNKEEKGAYILELLLEGQSIACVSDAGMPAISDPGADLVTKAIEEGIAVVPLPGANAA LTALIASGLDTKSFTFAGFLPKRGKHRIEELKRLSQVTGTLLFYEAPHRLQEVLQDMYEV FGNRSITVARELTKKFETFVRTDLESLIKDLEQLTYKGEFVLIVSGADTVESDTCEVLDE PVSYEDAVQALVDTGVPKKEAIRQVAKRFNVSRRDVYNIVER >gi|292596547|gb|ADCV01000001.1| GENE 16 15775 - 17721 2212 648 aa, chain + ## HITS:1 COG:BH0053_1 KEGG:ns NR:ns ## COG: BH0053_1 COG0143 # Protein_GI_number: 15612616 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Bacillus halodurans # 1 520 1 529 555 611 56.0 1e-174 MGDTKKTYYITTPIYYPSAKLHIGHTYCTSVADTIARFKRLAGYDVRFLTGSDEHGQKIQ RAAEAQGITPLEYTTNIVNGFKALWEKMHISNDDFIRTTDERHEKVVQALFTKAYEKGDI YKAEYEGWYCTPDETFWTEQKLGPNHTCPDCGRPVERVKEESYFFKLGKYTDQWLKFIEE NPDFIQPESRRNEMIQFVKQGLEDLAVSRTSFDWGIKVPFDPKHVVYVWFDALVNYISAL SPFDGDGELYKKYWPADLHLVGKEIVRFHTIIWPMMLMSLELPLPKKVFGHGWMIVDGTK MSKSLGNVIDPIPLIDTYGADSLRYYLLSEITLGNDGNFTLPNFVTKINADLSNDLGNLL NRTIAMIEKYHGGVITKCDDMDDLDRDVSTLAVQTAKDFEAAMENMELNKAIKTVWSFIG RMNKYIDETMPWVLAKSEDAHDKARLQSAMYHLAEALRIIAILVSPVIPVGAPKIWEQLG LTGFEAATLEDAKTWGLLATGTKVVKGEPIYPRFEVPEMVDVVVTEEVEEAVDTSNIPPL KENITYDDFEKLDLRVAKVISCEKVPKSKKLLKFVLDIGIEERTVLSGISQYYEPETMVG KKVIYLSNLAPKKMMGIESYGMILSASDWEEHLEVTNIESLPAGSVVK >gi|292596547|gb|ADCV01000001.1| GENE 17 17721 - 18491 830 256 aa, chain + ## HITS:1 COG:BS_yabD KEGG:ns NR:ns ## COG: BS_yabD COG0084 # Protein_GI_number: 16077107 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Bacillus subtilis # 3 255 2 254 255 247 48.0 1e-65 MKLFDTHAHVNDGRFDNDRNEMLQACFDTGVEYIMIPGVDRGTVESGLALAKQYDQLYAA VGTHPHESKDFTEEDYEFYKEQALNNDKVRAIGEIGLDYYYDFSDRETQKRVFIRQLELA REVDLPIIIHDRDAHGDIMNILRNEGKDNWGIFHCYSGSWEMAKEAIKMGFYISFAGPVV FPKSTNLKDVARQVPLERILIETDSPYLTPPPFRGRRNDPSKTQFVAEEIASLKGLDVDE FCEIAFNNGKRVFGIE >gi|292596547|gb|ADCV01000001.1| GENE 18 18714 - 20261 1397 515 aa, chain + ## HITS:1 COG:CAC0621 KEGG:ns NR:ns ## COG: CAC0621 COG0248 # Protein_GI_number: 15893909 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Clostridium acetobutylicum # 1 506 1 498 499 258 32.0 3e-68 MKRIAFIDLGSNSVRFVIYEISKTGSYRLIYQEKESVRLSENMWGTHELTEEAMERSLRA LKGFVHMADAMEANTIKAVATAAVRLAKNGDTFIKSVKERTGLDLECIAGEEEARLGFLG VINTIGLKDFIIFDLGGASTEITLVRNRHITKSVSLPIGALTLTGTYQKGDEYTPKELDK LTKVVKKTIKEHTWLRNVKLPLLGIGGTARNIAKMDQRKLSYPITKLHNYEIPYHRFHEI LEEVKGKTLEERKKISGLSSERADIIIAGLTIVEELFNYVNTKTLVVGGCGLREGLFYDY YGAHYLGGNSIIDDILVHSAENVLLGMTKHELVHAKYITDLAIKLYDELEPLHRADKNTR RCLIAASLLHDIGKRINYYSHARHGCYMLVNSNLYGLSHVEQAFSAFLVMNSHGLTPKEY KNFLYGKLLDQEQRLLGQKISIILALAEALDESHEQFIRHLSVNLKYTSVLLVVTYLNGR DISVTKAAVEKLGKSFKKEFKKTLEIEWKEARKEA >gi|292596547|gb|ADCV01000001.1| GENE 19 20261 - 21826 1140 521 aa, chain + ## HITS:1 COG:sll1546 KEGG:ns NR:ns ## COG: sll1546 COG0248 # Protein_GI_number: 16332241 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Synechocystis # 10 511 15 528 540 101 20.0 4e-21 MTLPKALRYAVLHVGSSSMSITILEYKGIDDVRVIDYAAREVTFGEELFQTSRLSFETIE EICHILKGYKQLMADYGVSRSRLYGTTVIREAANRRSILDQIYIQTGMRVEVIDMPKEVY YKYALLYYKMTNQYRLTDPTKATLFLDITSGGVGLTVWRGESLLFQRNMHSGSLRVMESF NRNQRSSTSFPMAITEYLHRMIGPLREELKTFNINSVILSGDEAQYMARLMGDGSNKDDI ITIEPERFKGFIKSFDGVTATKLINRYRLPEYKANILMPTMILFNEIITAIEPKSLIFSS FSFSQGISWFYGVEAENNPFMYQLREQNAQLARAVAARYHTDSIHDAEVERFSSLFCKTL RHKGLPERWGYLCRIAAILCSVGKFVNLRNHGEHAYHIVMGTDIFGLSEEEKQVVANVVF YHYKGTPSDDDTYFNSLTELQKIQVTKLVAIIRVACALDAGSNQEISDVILEERDNVLYV FCRTNEDISLEWWTFNRDAEYFTEVFGMELMLVRGGDRHVQ >gi|292596547|gb|ADCV01000001.1| GENE 20 21816 - 23933 1874 705 aa, chain + ## HITS:1 COG:BH1392 KEGG:ns NR:ns ## COG: BH1392 COG0855 # Protein_GI_number: 15613955 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Bacillus halodurans # 7 675 19 689 705 638 50.0 0 MFSNAKYYFNRELSWLKFNQRVLLESIDPNTPLLERLRFIAIASSNLDEFFMIRVAGLRH QVVNGIVKYDAAHMDAKAQLKAIDESVQRLVSMQSTYLNNVLTELEAHGFFFTHPDTLDV KTKAWLRHYFEEHIYPVVTPLAVDSGHPFPFLTNHTINAIVRIFQIQEDGTKDYKIAILP IPSVLDRIIEVPSRGNKEHRFVYLEDVITYYANQFFQGYGIEDYMVFRITRDADLEIDEE EATDLLSEVEASLRRRRRGDAVRLEVCGEIKDHLLDFVLTSVELEQKDVYRIDGHLDCRM YFDFCNYPGYDKLRYEPFDPKIPSELVDHEGDSLFSIIGKQDLFVHHPFESFAVVEQFIA QAAIDPDVLAIKQTLYRVSGDSPIIASLIKAADNGKQVTVLMEVKARFDEENNIHMARRL EKAGCHVIYGLKGLKTHSKITMVVRRETDGIRRYVHLATGNYNGKTARMYTDCGIFTCND EYGDDASRFFNLISGYSDPPIWNKFIVAPLNLREKIMELIDREIEFAKNGEEAYIIGKMN SLLDKKVIAKLYEASSAGVRIDLIVRGICTLRPGIAGVSDNITVRSIVGRFLEHHRLFYF RNGGNESLYLSSADWMPRNLNERVELMIPIEDKRHKERVKSILDLYLDDTLKAHFMRADG SYHKINDRENPISAQEELMKAAIEHEHRESMTVIERLQPMLKMNR >gi|292596547|gb|ADCV01000001.1| GENE 21 24359 - 25336 1385 325 aa, chain + ## HITS:1 COG:BH3322_2 KEGG:ns NR:ns ## COG: BH3322_2 COG3584 # Protein_GI_number: 15615884 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 237 325 19 111 111 84 54.0 4e-16 MRIHKTHKRYISSVVAGLIVTAVTMTGFSYNDKTVTVMVDGAAHTVRTHLNSNEGIVRDA GVKLNPNDKVISSSSTVQNGTTLTVVRAIPVYVTVNGKTRAVFTTETTAQGVANELGFKA PNYVVVGDENGSVLSGTRITIAQVTSRSLSTVDQEVAVEVVRQKDDTMAKGEEEVVQVGQ PGLERVQRETLYSNGTVIKTNDVSKVTQRAMVPTIIKEGTREVTTSRNVAGRASRAIVME ASAYLAGDGDGAGITATGLPAVRGIAAVDPDVIPLGTRLFIPGYGEAIAADTGGAIVGNK IDLVMDSYGEAMDFGRQDVTVYVLD >gi|292596547|gb|ADCV01000001.1| GENE 22 25459 - 26397 948 312 aa, chain - ## HITS:1 COG:NMB0044_2 KEGG:ns NR:ns ## COG: NMB0044_2 COG0225 # Protein_GI_number: 15675984 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Neisseria meningitidis MC58 # 2 182 1 181 181 207 56.0 1e-53 MNEHTIYLGGGCFWGLQGYIKKISGVLSTEVGYANGPTENPSYEDVCHNSGHVEALKVIY DADILSLDHLIQYFLRAIDPFSVNKQGGDVGIQYRTGIYYTDPTDKAVIESTLARAQAFE GKPFAIEVLPLENYYSAEEYHQDYLDKNPNGYCHIPLGLSDEPLIDDNTYAKPSQEDLEA LTPQEFEVTQNSATDAPFSHELTDEFKAGLYVDITTGEPLFVSAHKFDSHCGWPSFTKPI AKDVIKYYQDNSHGMNRIEVRSRIGNAHLGHVFEDGPNGSLRYCINGSSLRFIPKDELKG TKYEYLIPYIED >gi|292596547|gb|ADCV01000001.1| GENE 23 26398 - 27519 1464 373 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 9 371 12 373 374 413 56.0 1e-115 MSKHTAPFHFDIVGSFLRPAELKEAREAFNKGNITREELTAVEDRLITDLIQKQKAAGLP VITDGEFRRAYWHLGFMWGFNGVKEIELEHGYKFVGQETAPGSLALTGKITGTNHPFVEH FKFVKQFEDENTTARQTIPAPSQFLAELFREDNGITTRSFYPDLEELIQDIAAAYRQVIK DLYDAGCRNIQFDDCTWGMCCDHAYWTGRQKDKSVTIEGETAKYLRLNNLALEGRPHDLA FTTHVCRGNYNSTWAASGGYEPIAPILFAKENVDAYYLEFDDDRSGGFEPLREVFPNKKV VLGLITSKRPELEDKEIIKERIKEATKYIPLERLCLSPQCGFASCEIGNQLTEEEQWAKL ALVKEIAHEVWGD >gi|292596547|gb|ADCV01000001.1| GENE 24 27773 - 28711 1133 312 aa, chain - ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 299 1 299 301 323 52.0 3e-88 MTLQQLKYVTTIANIGSISEAAKRLFVSQPSLTKAIKELEKEMGITIFDRTNKGITVSKE GERFLGYARQVLEQAALLEEQYKSQSGGKKQFSVSTQHYSFAVNAFVELLKGAEIDQYDV SLRETQTYEIIDDVAHMKSEIGLLYYNDFNRPVLEKLIHTNELTFTELFTAHPHIFIGKT HPLAHKEVVSMDELEEYPYISFEQGDHNSFYFSEEIFSTVVRPKHIRVRDRASLFSLLLG LDGYTVSSGVIDKEVNGENIISVPLAEEGLMHIGYITNNKMQRSRLGQEYIHALEQYVSN YGRHIQLPENKK >gi|292596547|gb|ADCV01000001.1| GENE 25 28818 - 29345 683 175 aa, chain + ## HITS:1 COG:CAC2987 KEGG:ns NR:ns ## COG: CAC2987 COG1658 # Protein_GI_number: 15896239 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Clostridium acetobutylicum # 1 174 1 174 185 155 45.0 4e-38 MLKQVIVVEGKSDIQRIAQAVDADCIATEGFTLRRGVIDMIRVAYEKRGIIILTDPDTAG ERIRRVLTKKFPNAQHAFVPRDEAFANDDIGIEQASPESIRKALSTLHVESLESSNEFTM VDLVRHGLSGMPDSAARRAVIGAKLGIGYGNGKQFLYRLNHYGITRDAYEEAVNC >gi|292596547|gb|ADCV01000001.1| GENE 26 29359 - 30213 960 284 aa, chain + ## HITS:1 COG:BS_ksgA KEGG:ns NR:ns ## COG: BS_ksgA COG0030 # Protein_GI_number: 16077110 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Bacillus subtilis # 6 278 5 286 292 254 49.0 9e-68 MLESVIASPEVVHYICKRFDIKMSKKLGQNFLIKRGIVDEIVHAAELTVGEPVLEVGPGI GTLTQGLAQSGADVTAIELDRRLLEVLDTTLASYDNVRIIHGDVLKLDVPTIMNHKPFKV VANLPYYITTPIIMSLLESKLPIERLVVMVQKEVALRMIAKPGTKDYGALSVAVQYYTEP DIVLDVPPKSFLPAPAVTSSVIRCVLRDKPPVDVIDEKLFFRVVKAGFAQRRKTFSNTMK TTGLTRDRIEELLAKANIDGQRRGETFTLQEFADVANAWAALIK >gi|292596547|gb|ADCV01000001.1| GENE 27 30305 - 31552 1607 415 aa, chain - ## HITS:1 COG:FN0793 KEGG:ns NR:ns ## COG: FN0793 COG0786 # Protein_GI_number: 19704128 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 16 411 5 391 399 275 42.0 2e-73 MPLIDLALVNNVWTLKLSMIQTVGLAVITLFIGTWINKHSKFLQRMCMPAPAVGALPFAF LTAILSYYKILNITFEGSLQTFLMLAFFTTIGLMASLKVLKKGGIFIIFFFLACAVWIVV QNTAGIMIAKALGIEPIIGIMAGSVSMIGGLGTAGAFGPYYEQLLGIPGTASAAVAAATF GMVAGTILGAPVGERIIKMHKVKTPYENPELMEDEGIDIIEDHVESGGKQFNAQDLLTIC MWIGLALGIGTIVSAGLSVLTPLPAYIGAMICAAVIRNFGDFTKAYKINDAALDAVSNVA LSLFVTMAINSLKLVQLIDLALPLITILVVQMALICVFAYLIYFLFGRNYDAVMLGAGAI GFGLGATPNALVNMLSLASKHGPSPRAWLVVSLVGAFLIDFANAFLITTMAGILY >gi|292596547|gb|ADCV01000001.1| GENE 28 31999 - 33594 2351 531 aa, chain - ## HITS:1 COG:CAC0630 KEGG:ns NR:ns ## COG: CAC0630 COG4108 # Protein_GI_number: 15893918 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Clostridium acetobutylicum # 3 516 4 516 526 644 60.0 0 MTFLEEVQRRRTFAIISHPDAGKTTLTEKLLLYGGAIHLAGSVKSRKTAKHAVSDWMEIE KQRGISVTSSVLQFDYDGCRVNILDTPGHQDFSEDTYRTLMAADSAVMLIDVAKGVEAQT KKLFAVSKERGIPIFTFVNKIDHFGRSPFDLMEEIENVLGIRTCPMNWPIGINGEYKGVY DREHETIELFAKDETHGQEKLASEKGALTDPRMKELLGDDVYQALLDDIELLDVAGDPFD FDKVRAGELTPMFFGSAMTNFGVKPFLEKFLELAPSPAPRQAIEEMVQPTSEDFSALVFK IQANMDPNHHDRIVFMRICSGKFEKGMSVLHRQSNKTIRLSQPQQFLATERTIVEDAYPG DIIGVFDAGTMGVGDTLCAQKHKVTFGDFPVFPPEFFARVSPKDTMKRKQFQKGMTQLAQ EGAVQIFEQPGALDSFVVGAVGMLQFEVLEYRLKNEYGVDLLNHTLPYGVARWIDGEVDI ASLKGIDNAMIVKDNRDRTVVLISNEWQMGWVQERNPDVTFLTTPKLHHEL >gi|292596547|gb|ADCV01000001.1| GENE 29 33773 - 36094 2101 773 aa, chain + ## HITS:1 COG:XF2059 KEGG:ns NR:ns ## COG: XF2059 COG0550 # Protein_GI_number: 15838651 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Xylella fastidiosa 9a5c # 1 700 1 668 685 455 39.0 1e-127 MRLFIAEKPSMAREISKCLPENKNIQKRNGYFIQGDDVVTWVVGHVLHQAEPGDYDDKYI RWRPQDLPIVPDEWKLLVTDSSRQQFEIVKDLISKADVIVNAGDPDREGQLLVDEVLYYV GNTKPVQRILLNALDEKSIRSALDDLRDNKDFHNLYQSALARARADWLIGMNLSRAYTLS ERYKGHKVTLPIGRVKTPTLALVVRRERELAAFKPVDYFTVKVLYNHPNGVFWATWQPTD EQKGLDPDGRLINKAIADELVECLQAGPDGFIKGVTKSKKKDVQRLPLSLSSLQVLAGKA FSYDPQTVLDTAQKLYEKKLTTYPRSDCEYLPPNQYDDRNAILNNLQNAGDERLAQWAAD ADRSIKSRAWNEKKITAHHAIIPTTVACNINSLSQEERNIYFLISQAYIAQFYGEHIYEQ TKIVVEQCKEEFVANGRVVIEEGWKLLYKRHKSKSTTDNDEPDLTDERGAESDPKKEVIE ETDHLPAVKKNDTVLYTDSSVEAKQTKPPSRFTPSTLLQAMKEIHKFVKNEDLKKQLKAV SGIGTEATRANIIDELISRGFMKTSGKKQVLSPTETGYLLVDALPEELLYPDETAVWEER LALMSEGADTLDSFLADQIKFLQLLIDKLDFDKVINFDQMMPNVVRTITSQNRKRPMDNE SIDLSSLPVCPKCKKGRLQQRNGKFGAFLGCTNYPRCKHTQQVEEDTSSVEGNIEVSDED KQYKCPRCKVGYFVKQEVRGRTNWICSNRSQCKTQCSDVDGVPSIYVNKSNIT >gi|292596547|gb|ADCV01000001.1| GENE 30 36217 - 37515 1428 432 aa, chain - ## HITS:1 COG:lin0859 KEGG:ns NR:ns ## COG: lin0859 COG0513 # Protein_GI_number: 16799933 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Listeria innocua # 1 363 1 363 516 310 43.0 4e-84 MKSFKSLGVCDELIIALQKQGIKEPTPIQEQSIPVVFKGNDVIAKAQTGTGKTLAFLLPI LQRVHTDVHQEQVLIIAPTRELIKQISDEAKELGSILNVDILPLIGGKTIEAQLQQLGRR PQVILGTPGRLLDHAKRGSLHLDCIRRVVLDEADQMLHMGFLPDIENLIGQTDANRQLLL FSATIPDKIRNLAKAYMSKPISVTAEGKHITLESIDQRVYMMNPEEKTQRLIKMIEDDNP FLAIVFCNKREGAIRLSYELTAAGLNIAEMHGDLTQGRRTQILRDFAKAKTQILVATDIA ARGIDIEGITHVYNYDVPRDVDYYIHRIGRTGRAGNSGIAVTFATPQDEAWLRRIERAIQ ATLTKYTKDGQIKTKGNASTAPKRTKSASKPKVTSTYQSTKAKAHKARGHKGSNTRQRRA STSQTGRRGKRR >gi|292596547|gb|ADCV01000001.1| GENE 31 37732 - 37824 69 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIYLDTVINKHYKDYHLQMLTHSQLTVYK >gi|292596547|gb|ADCV01000001.1| GENE 32 38055 - 38288 439 77 aa, chain + ## HITS:1 COG:MA3479 KEGG:ns NR:ns ## COG: MA3479 COG1918 # Protein_GI_number: 20092290 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Methanosarcina acetivorans str.C2A # 4 76 7 79 82 63 43.0 9e-11 MAIKKLKDMKPGESGLIVALHGSGNVKHRLIDMGLVNGTKIHVMKFAPLGDPVEIKVKNF ELALRTSEAGMIDVEVQ >gi|292596547|gb|ADCV01000001.1| GENE 33 38298 - 40670 2658 790 aa, chain + ## HITS:1 COG:MA3477 KEGG:ns NR:ns ## COG: MA3477 COG0370 # Protein_GI_number: 20092288 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Methanosarcina acetivorans str.C2A # 1 542 6 540 670 442 43.0 1e-123 MAENGQIRIALAGNPNCGKTTMFNNITGAKQHVGNYAGVTVEKKEGHTNFDGHELLFIDL PGTYSLTARSLDELVARNVIVNDNPDVIVNVLDASNLERNLYLAAQLLELEKPMVIALNM ADVAEEMGIKYDLKKMAEMTGATIVSTVGRTNIGTKDLLEAIISVAASQKAPGVTINYGD LLEGKISELVELLKQAGTVTYPLRWIAVKLLEKDADVIGKVMRFDNTEAVIQKAEAIREE IKDQVDLDIVFQEYRHRFAVEVYNTCLTQAPTQLETRSDRYDKILTHRIWGLPIFMVVMY LLFAFVNFVGGIPQGWIEDGFAALQAYAVQTIPEGQLQSLVSDGIIAGVGAVLSFLPLIL LLFLGISFLEDTGYMARAAFVIDRVMRACGLHGKSFIPLLLGFGCSVPSVMGARILDNYK DRMVTILITPFMSCSARLPVYILFANAFFPNGWDSTLVVFSVYFLGIIFGIIFAKIFRKF LFAGEAEPFVMELPPYHLPTLKATWMHMYERAKLYIIKAGTFIMAASILIWFITAYPMDV EYSKDYDAVKEQVAQEYEVKDAATLSQFGIATDDQKDAVDKIVEDMKSTVQDATDAAKQA GEDEPEVAVEDDSEAPELFNDIKDENKDLFPAAWAMYKNSANLDAENDKLDKEQAAEKIE QSYAASFGKAINPVLEPLGFDWKMGLSLVAGLAAKEVVISTLGTVYAVGGDDKNPAPLTD YLQNDPNFSPLIALTMMLFVLIYPPCLATLAVIKRETGSWKWVAFMFCYENTFAWIACFI FYNIGRALGF >gi|292596547|gb|ADCV01000001.1| GENE 34 40902 - 41108 394 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238019579|ref|ZP_04600005.1| ## NR: gi|238019579|ref|ZP_04600005.1| hypothetical protein VEIDISOL_01448 [Veillonella dispar ATCC 17748] # 1 68 1 68 68 67 100.0 3e-10 MDNLVIGLIVVLALAYIGNKFYKQMSGKGGCGCGGGSSKSGSKKSSGCGGNCSCDGSNKA LGIKRTAK >gi|292596547|gb|ADCV01000001.1| GENE 35 41213 - 41473 526 86 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0634 NR:ns ## KEGG: Vpar_0634 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 86 1 86 86 117 96.0 1e-25 MFNIDQKNLKNANLFAAGLALGTVGLKVLTSKDAKKVYAGIVAAGLRAKETVLETAEKVQ ASASDVLAEAQEINEARNEEIFEENK >gi|292596547|gb|ADCV01000001.1| GENE 36 41488 - 43626 2977 712 aa, chain + ## HITS:1 COG:SP2101 KEGG:ns NR:ns ## COG: SP2101 COG2217 # Protein_GI_number: 15901916 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 109 688 106 683 687 387 35.0 1e-107 MLQFSVVRKLRNRLHVKVSGHRFTEAEAAYVEDTLLLNDAIVDVTFYTRSSQIAIKHNGD SDAVRDAVLGLRDLDLSEAPALNEYSPRLVNKKYREMMINRTAVYLGKKAVLPAPIAAAW AWFDGIKFIGKAIKTLWQRKLTVEVLDGVAIGAALLQKDYPTASAVMYLLGIGDILEEWT HRKSVLNLAQSMSLNVDKVWVLVDDIEVSKPVNEVVAGDQIIIRQGEVIPLDGTVIDGVV LVNESSMTGEPEAVRRDKDTSVYAGTVVEDGKAIVEVRSTSKSSRYEKIVNLIEESEQMK SGMEQQAYRMADKLVPISFIGAGLTYLLTRNVMKALSFVMVDFSCALKLSIPLAVLSAMQ EASKRGITVKGGKFLEQIAQADMIVFDKTGTLTKAEPEFEQIIPFNGHDADEMLKLAACI EEHFPHSMAKAIVRAAKDHALPHKEMHSDVEYVVAHGIASKVGRYRVRIGSAHYIFDDEK TKIPADEQEKFNNLPNTSSHIYLAIGGTLAAVICIKDPVREEAKQVIADLHALGIKKVVM MTGDSKRNAQRVADELGIDEVHAEVLPEDKASYVKQAKAEGYTVMMVGDGINDSPAISEA HVGIAMNEGAPIAQKIANVTISSDHLQALVDLRRISIALMKRIKANYNGIVGFNGALVGG GVLGFMPPSQTAWLHNLFTLGIGLESMTPLLKKEEPKETVPTIDVTADSVVA >gi|292596547|gb|ADCV01000001.1| GENE 37 43743 - 44147 425 134 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0636 NR:ns ## KEGG: Vpar_0636 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 134 1 134 134 221 95.0 8e-57 MNILIDICRRSFYLNLFIVVIPIIAYMIHNGSSATVALVWYLLLSLCMPWAYLSFKSSTF GEGKSISRIAYVVSWVVVHGISYKGIFLGIDLSMLWGWPTVGRDIAFLLAMYLSVTFSLI IAYGLTRLVGDRNE >gi|292596547|gb|ADCV01000001.1| GENE 38 44115 - 44327 247 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSGKSSLNLAFFSRRTIIGMTSDKTGNTKMGIDSAPLNESTVVIALTKSEQINVNNQKL LFITVSHQSS >gi|292596547|gb|ADCV01000001.1| GENE 39 44275 - 44982 563 235 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0637 NR:ns ## KEGG: Vpar_0637 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 235 46 280 280 394 97.0 1e-108 MVRRLKNAKFNDDLPLSMGYHAYSWAWWTVFSFLHTPFSFNVDNGLAKVLLLFVVYFIVQ VLIELCGLLATKYFNRTHRWGMIDEALDIIAYTIPIPFLYIASILYIDLQDPMVYFMYAS SMNVNILFAELVLLLVSLLVFVFYLYPRDLAYKGVRLFRIIITAGIWLAMNAHILYGGYI PEFILSLVPTVFPTYQGNPLVFVTPTLLEAGMTGGAVIIGALVERGIISRRRERI >gi|292596547|gb|ADCV01000001.1| GENE 40 45032 - 45793 826 253 aa, chain + ## HITS:1 COG:CAC0331 KEGG:ns NR:ns ## COG: CAC0331 COG4684 # Protein_GI_number: 15893623 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 35 223 4 192 192 149 42.0 6e-36 MNNIERPLDDNSTVSIHDNEKLKQVERKEAKKEKKSGITIRELTIIGLLAGITIALGLSG YGIIPLGPLNVTTLHVPTLIGAIVEGPKVGAFVGFIFGCYSLWQNITAPNILSPLFINPI ISVLPRILFPVLAYLVYLLLWKAPQGPRIIVSAFMGTVFHTIMVMGLIFLLYADMFALKM NLSPDQVLGSIVFLSVTHGIPEAVFAAVIVTPVAMALRKVLRKDAPKKTKGEAMRDAKVT DHQLGETEVVETK >gi|292596547|gb|ADCV01000001.1| GENE 41 45894 - 46037 245 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAKRIRTINTESLQKTAKTGGCGECQTSCQSACKTSCTVGNQVCKQK >gi|292596547|gb|ADCV01000001.1| GENE 42 46204 - 47613 1617 469 aa, chain + ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 7 455 3 452 454 409 45.0 1e-114 MLELKPMIHKFRMKDNYYCLDVNSGIIHVIDELIDRVLDIYDGTNRDAVHAALDAKEDAV ELDEIMDELDELIKAEQLFAPMSKEFKLVVGEKPIVKALCLNIAHDCNLACKYCFASQGD YGGVKRELMSFDVAKRAVDFLIKMSGPRQHCEIDFFGGEPLLNWDVVKQTVEYIESIQEK HNKIFKLTLTTNGMLLTQDKIDYVNEHKMSLVLSLDGRESVHNAMRPVAGSGAESYKYIA KNLVNAVKQRHGLEYYVRGTYTHKNLDFTKDVMAMSDLGFEHLSMEPVVGEEGDYVLREE DWPALEKEYEKLADIYLQRQLEGWGEKFNFFHFRMDLYRGPCMAKRLRGCGAGHEYMAIV PNGDIYPCHQFVGKDGYVLGNVYDGLQNTEIPKDFRNTHVFSKPICAECWAKFFCSGGCH ANNITLGGDLETPYEFGCRLQKKRIECAIMIQAELEQAGIDGSIPVALG >gi|292596547|gb|ADCV01000001.1| GENE 43 47649 - 49928 1729 759 aa, chain + ## HITS:1 COG:aq_672 KEGG:ns NR:ns ## COG: aq_672 COG0068 # Protein_GI_number: 15606085 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Aquifex aeolicus # 10 759 4 745 746 539 39.0 1e-153 MKQNSNQTTERWGIRYTGIVQGVGFRPLVSMLAHSLGLTGFVYNDSQGVYVEVQGFLGEL QLFLDAVQEEQPRLCRITSQTVQHLTLNMHESDFVVQASPLGESVSTFISADTAPCNDCL KELQQDKRRKEYPFINCTNCGPRYTIIKSLPYDRERTTMNEFPMCEDCKAEYEDIEGRRY RAEPNACSRCGPQYTLYKPDRKAVDTVNIWNTTRELINEGSIIAIKGVGGYHLVCDARND AAVQRLRKRKNRSHKPLAIMVGTLDMAIELVHINDVELDILTGMERPIVLLEKNHNSSVH LSSYVAPDNRMLGVMLPYSPMHEVLLPSDAAWVMTSGNKSGDSVLYNDDQAFNELGEVAD YFLIHNREIYAPLDDSVVVVINNKPRFIRRSRGYVPEPIHCDGLEQTSILAMGSDLKNAF AVNKGSEVLVGPHIGDLENASTHKTLEWTIERYKNLFSIQPEKIIIDSHPQFFSSRLGEK IGESFHLSVVPVQHHHAHIASVMAEHNLRGLVLGIAMDGTGYGPDGTIWGGEFLLCKGNQ YQRLAHIHAAPLPGGEKAVTEPWRQALWYIRNYYGDDIPFVYQEWMKELPKGWEILDKAL QSRMPMIQATSCGRLFDTVGALLGLGMVHSYDAQIAIALETLCGDEKGSLLAYNYDGHIL DFTPTVQSIMDGVVRGECRAHLAASFHKTMAIALCETAADLMERYNISNAAMSGGVFQNR KLLEFIYKTWHIGNLYMNEAVPSNDGGLALGQLWLGNQL >gi|292596547|gb|ADCV01000001.1| GENE 44 49991 - 50089 62 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKINIIVSQLHSLFSDSVHKQLELKLAMALT >gi|292596547|gb|ADCV01000001.1| GENE 45 50162 - 50413 446 83 aa, chain + ## HITS:1 COG:PAB7315 KEGG:ns NR:ns ## COG: PAB7315 COG0298 # Protein_GI_number: 14521441 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Pyrococcus abyssi # 1 68 1 68 75 69 44.0 2e-12 MCLAVPAQLIAVNDAIGTVELTGATRDCSLLLVPDAKVGDWLLVHAGFAVQIVDEEEAQK TLEAFKELEELEEAYFAGKAAHS >gi|292596547|gb|ADCV01000001.1| GENE 46 50469 - 51491 1117 340 aa, chain + ## HITS:1 COG:CAC0811 KEGG:ns NR:ns ## COG: CAC0811 COG0409 # Protein_GI_number: 15894098 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Clostridium acetobutylicum # 1 329 31 358 361 327 47.0 1e-89 MEVCGTHTVSIFREGLRQLLPSGIELVSGPGCPVCVTDQTYMDKALAYAEREDVIIATFG DMLKVPGSYSSLNEAQTKGAHIHVIYTPLEVIELSKKYPEKKIIFLAIGFETTIAIICAT VKAVHAAGLKNVFFLVSHKLVPPALRALLDKQEGHIDGFILPGHVSVIIGEEPYRFLPKE YGIPSCIAGFDGLEILSAIANILEQRESGNIVVGNTYHSVVMQKGNPVAQAMIEEVYEVC DDVWRGIGVIPNSGLALKGEYAAYDVELVLPINLDKPSLDPKGCQCGRVLQGLIKPSECP LFGKSCTADHPVGACMVSVEGSCAAWYKYGYSSGGSTWED >gi|292596547|gb|ADCV01000001.1| GENE 47 51493 - 52500 1030 335 aa, chain + ## HITS:1 COG:CAC0809 KEGG:ns NR:ns ## COG: CAC0809 COG0309 # Protein_GI_number: 15894096 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase maturation factor # Organism: Clostridium acetobutylicum # 3 335 4 335 335 299 45.0 6e-81 MERVRLVHGNGGRFSHELTDRFILKYFTNDLLAPLHDGAQFPVTAGRMAFSTDSYVVQPA FFPGGNIGKLAVCGTVNDLAMNGAIPQYLSCGLILEEGLAFEELDEILRTMSEMAKAANV QIVTGDTKVVKKGEVDKIYINTAGIGMIPDGIDIGPHRVKAGLDIILSGAIGDHSIAVMG QRFGLDLSDSLTTDCAPLNKMVQAVLDKVGTQVALLRDPTRGGLGTVLKEIADQSQVGIK VEETAIPIHEEVLSVCNILGYDPLYLANEGKVVLIVEPSITDEVLKILHSFEEGSEATLI GKTLDKNIGKVGLQTAIGGVRLIDLLGEDQVPRIC >gi|292596547|gb|ADCV01000001.1| GENE 48 52762 - 53208 700 148 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0645 NR:ns ## KEGG: Vpar_0645 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 148 1 148 148 212 100.0 3e-54 MKKKIITAVLGICLTTTAFGGILTTQAGGLSSILGGAAKIGGIGIVVNKFGPQIDSFLNK LLKQNNLSTEYTTKVVPIISIGTKGYIGAAQVTGPASSIEEVKAVAQVEGSFNGMVRVKG LVPVNSTNPVGASRVQGVGVSAIIDLKI >gi|292596547|gb|ADCV01000001.1| GENE 49 53317 - 54429 1500 370 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0646 NR:ns ## KEGG: Vpar_0646 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 370 1 370 370 605 99.0 1e-172 MKKQVLTLLMASLISGTAFAAPGTVTEKTNVLETTVYGAVQDGAVVDRINQLDETVYGTG FNGNSATLSKRVDSLYNSVEGSGTNISLREEMDALEYTYQNSINAGSLVDRVEKMERSVN GRIGSGSLQKRIISLKTKVYGSNVALTNQVGTLSGNQVFKVTLNEAVSSKTSHEGDTISF TVAENVMDGNVLLVPAGTVGSGTITSLKKARSFGRNGALDITFDTIPAIDGTEFTAVQGK EAKDKTRSEVKAAGASVAGAVLLGPVGLVGGAFIKGKNIEYPAGATVYVQPQDSVTIQGL VIGGDGLAHSDDELADAVTVPNTTGESEEYVENNDTDENAAVAEDTTAVEEPEEPVENVS QPIVVVKRNQ >gi|292596547|gb|ADCV01000001.1| GENE 50 54467 - 56020 1661 517 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0647 NR:ns ## KEGG: Vpar_0647 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 517 1 517 517 1011 100.0 0 MRKRKVQWLAAACVVCLAQPVWAATESTIVYQDTLDSVGQSYAGEISKASTPEYSNIRVV RRGEKAKSAAPAEQLPTRIDANKMSYTGSTGDVYAQGDVVVSQGNQTLMAPRIEGNTKTT EYRTVGGYRYLEDGGKTKDITGQNMTYRTSDRHFEADQAMGWSDPYYVKGNNATFDGQIG HMEKGMVTTKHAMAFVHTPDYRVEGQDIQVYPGDKVVIKKPSFYIKNFKVLSLPSYTTSL RHDKEGKFSIFSLIPKPTYSNDDGIGLHGSTEYPIGKNGEAYIDYRWYSKSGFKPQVGYR HYLPWGTASVGYSKESNEYNDETVWVEKIGEARLDTHTYHVGNSPITVRGGVNAGYWKEG SVKGSHKEYYAEVSHDPIKLGKNADLRFLGGYQRDYYGYDGSIRSMPYWGARFQSKVGNR ANVWVSYNQRNITYNNSPYRFDTTELPKELIYGGTYKLTRLDDISVSVKNNMMSGDIDSV YYTWHRDLHSFDMYLTYKDGHKNKNDQWKIKFVGKDF >gi|292596547|gb|ADCV01000001.1| GENE 51 56034 - 56897 1122 287 aa, chain + ## HITS:1 COG:CAC2335 KEGG:ns NR:ns ## COG: CAC2335 COG1210 # Protein_GI_number: 15895602 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Clostridium acetobutylicum # 3 281 2 282 303 357 64.0 2e-98 MQRIRKAVIPAAGFGTRFLPATKAQPKEMLPIVDTPAIQYIVKEALDSGIEEILIITGRN KRAIEDHFDSSVELELLLQSQGKNKPLAMIKDLADIKVHFIRQKAPRGLGDAVLCAKAFI GDEPFAVLLGDDIVYNPENPCLKQLIDCYNEHPGIILGAQFVPEDKVSSYGIVSGEALAD NLYRVDNLVEKPKKEDAPSRLAVLGRYILTPDIFNILEATKPGVGNEVQLTDALAASKTD TYALAYEGIRYDTGDKLGYLKATVEYALRNEELGESFKAYLKELDLK >gi|292596547|gb|ADCV01000001.1| GENE 52 57071 - 57637 493 188 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0649 NR:ns ## KEGG: Vpar_0649 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 188 1 188 188 386 98.0 1e-106 MRTLFKALCNNDLNLPGHSVIKHMHYDSSGSDRTVCEIVSKVAKTTTIGIMDTSGFLMVD LRPVPKQFNIRSTINQQGADGAISFSKKEVIRFVNDINDTNPIHRENPYVVPGCMILETM WDFWNISKSALQMAIYFHAPVIADDKVTLVEYPEDAHVEGYIGDTLAFSATFFGENEDSS SLKQRCIS >gi|292596547|gb|ADCV01000001.1| GENE 53 57646 - 58158 187 170 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764517|ref|ZP_02171573.1| ribosomal protein L32 [Bacillus selenitireducens MLS10] # 2 169 4 174 190 76 31 3e-13 METRRLTKMALLTALLCISAYISFPLPFSPAMVTALTLVATLIGLLLQPKDALIVFIIYI LLGAVGLPVFVGGTAGLGKLLGPTGGFIFSWPVAYTLLSIFKGSKKSFFSYAWRSLVITI PVVYLFGVAGFMIVTKTELWAALPVVMFPFIPGDIVKCLVASWLATKVKI >gi|292596547|gb|ADCV01000001.1| GENE 54 58344 - 58500 81 52 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 3 52 2 51 157 80 78.0 6e-16 MNDVKSLSHSKWRCKYHIVFAPKYRRQIIYGRIKADVGKILRDLCKRKNVEI Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:45:04 2011 Seq name: gi|292596546|gb|ADCV01000002.1| Veillonella sp. 3_1_44 cont1.2, whole genome shotgun sequence Length of sequence - 282953 bp Number of predicted genes - 274, with homology - 272 Number of transcription units - 77, operones - 49 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Op 1 8/0.000 + CDS 315 - 1421 1043 ## COG0183 Acetyl-CoA acetyltransferase 3 2 Op 2 . + CDS 1423 - 2718 564 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 4 2 Op 3 . + CDS 2746 - 3744 1149 ## Vpar_0653 hypothetical protein + Prom 3747 - 3806 2.9 5 3 Op 1 . + CDS 3826 - 4317 609 ## COG2606 Uncharacterized conserved protein 6 3 Op 2 . + CDS 4328 - 5053 448 ## COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein 7 3 Op 3 . + CDS 5076 - 5999 867 ## COG0451 Nucleoside-diphosphate-sugar epimerases 8 3 Op 4 . + CDS 6020 - 6298 299 ## Vpar_0657 protein of unknown function DUF1294 + Prom 6300 - 6359 2.7 9 4 Op 1 . + CDS 6382 - 7818 1568 ## COG0166 Glucose-6-phosphate isomerase 10 4 Op 2 . + CDS 7828 - 8817 1176 ## COG1087 UDP-glucose 4-epimerase + Term 8849 - 8901 14.2 + Prom 8849 - 8908 3.4 11 5 Op 1 . + CDS 8943 - 9791 439 ## Vpar_0660 hypothetical protein 12 5 Op 2 . + CDS 9773 - 11095 975 ## COG4796 Type II secretory pathway, component HofQ 13 5 Op 3 . + CDS 11124 - 13043 1742 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 13079 - 13138 5.8 14 6 Op 1 20/0.000 + CDS 13164 - 14312 1623 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component 15 6 Op 2 24/0.000 + CDS 14329 - 15210 1154 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 16 6 Op 3 19/0.000 + CDS 15210 - 16220 1126 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 17 6 Op 4 18/0.000 + CDS 16232 - 16993 275 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 18 6 Op 5 . + CDS 16995 - 17705 284 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 17743 - 17799 16.8 + Prom 18023 - 18082 2.8 19 7 Tu 1 . + CDS 18117 - 18860 770 ## COG1596 Periplasmic protein involved in polysaccharide export + Term 18943 - 18974 0.2 20 8 Tu 1 . - CDS 18840 - 18923 62 ## - Prom 19049 - 19108 5.0 + Prom 18904 - 18963 5.9 21 9 Tu 1 . + CDS 19075 - 20724 1698 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases + Prom 20768 - 20827 4.9 22 10 Op 1 . + CDS 20875 - 22320 1730 ## COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis 23 10 Op 2 . + CDS 22322 - 22933 607 ## COG0489 ATPases involved in chromosome partitioning 24 10 Op 3 5/0.000 + CDS 23011 - 24210 1226 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 25 10 Op 4 . + CDS 24204 - 24890 378 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 26 10 Op 5 . + CDS 24902 - 25768 804 ## COG3475 LPS biosynthesis protein 27 10 Op 6 . + CDS 25778 - 26500 309 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 28 10 Op 7 8/0.000 + CDS 26493 - 27542 851 ## COG0451 Nucleoside-diphosphate-sugar epimerases 29 10 Op 8 . + CDS 27539 - 28606 1023 ## COG0438 Glycosyltransferase 30 10 Op 9 . + CDS 28626 - 29867 845 ## Vpar_0678 O-antigen polymerase 31 10 Op 10 . + CDS 29845 - 30777 691 ## Vpar_0679 hypothetical protein 32 10 Op 11 . + CDS 30755 - 31894 964 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 33 10 Op 12 3/0.000 + CDS 31894 - 33348 909 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 34 10 Op 13 8/0.000 + CDS 33371 - 34468 1200 ## COG0451 Nucleoside-diphosphate-sugar epimerases 35 10 Op 14 . + CDS 34469 - 35635 1520 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 36 10 Op 15 . + CDS 35672 - 36106 239 ## Vpar_0684 VanZ family protein + Term 36153 - 36197 10.3 + Prom 36185 - 36244 10.2 37 11 Tu 1 . + CDS 36395 - 37198 916 ## COG4464 Capsular polysaccharide biosynthesis protein + Term 37205 - 37261 9.1 + Prom 37354 - 37413 9.8 38 12 Op 1 12/0.000 + CDS 37443 - 39593 2355 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase + Term 39745 - 39789 13.2 + Prom 39616 - 39675 7.5 39 12 Op 2 . + CDS 39837 - 40346 433 ## COG0602 Organic radical activating enzymes 40 12 Op 3 . + CDS 40349 - 41587 1150 ## COG0038 Chloride channel protein EriC + Term 41634 - 41674 9.1 - Term 41622 - 41662 9.1 41 13 Op 1 . - CDS 41680 - 42228 547 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 42 13 Op 2 . - CDS 42250 - 43203 1314 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase - Prom 43281 - 43340 8.6 + Prom 43621 - 43680 5.9 43 14 Tu 1 . + CDS 43750 - 43884 300 ## Vpar_0691 rubredoxin-type Fe(Cys)4 protein + Term 43899 - 43938 6.1 + Prom 43905 - 43964 5.8 44 15 Op 1 20/0.000 + CDS 43985 - 44497 385 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 45 15 Op 2 . + CDS 44523 - 44699 333 ## PROTEIN SUPPORTED gi|227371476|ref|ZP_03854960.1| LSU ribosomal protein L32P + Term 44708 - 44759 10.9 + Prom 44823 - 44882 11.3 46 16 Op 1 4/0.000 + CDS 45007 - 45567 560 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 47 16 Op 2 16/0.000 + CDS 45571 - 46599 1148 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 48 16 Op 3 . + CDS 46583 - 47578 1080 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III 49 16 Op 4 3/0.000 + CDS 47594 - 48538 1303 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 50 16 Op 5 26/0.000 + CDS 48550 - 49491 1309 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 51 16 Op 6 22/0.000 + CDS 49493 - 50236 207 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 52 16 Op 7 4/0.000 + CDS 50288 - 50518 422 ## COG0236 Acyl carrier protein 53 16 Op 8 . + CDS 50596 - 51552 1114 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase 54 16 Op 9 1/0.143 + CDS 51588 - 52832 1740 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 55 16 Op 10 3/0.000 + CDS 52832 - 53572 842 ## COG0571 dsRNA-specific ribonuclease + Term 53577 - 53602 -0.5 + Prom 53595 - 53654 9.2 56 16 Op 11 . + CDS 53743 - 54942 924 ## COG1243 Histone acetyltransferase 57 16 Op 12 10/0.000 + CDS 54988 - 58542 3923 ## COG1196 Chromosome segregation ATPases 58 16 Op 13 . + CDS 58542 - 59477 794 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 59 16 Op 14 . + CDS 59467 - 59850 438 ## Vpar_0707 hypothetical protein 60 16 Op 15 7/0.000 + CDS 59850 - 62027 2296 ## COG0556 Helicase subunit of the DNA excision repair complex + Term 62077 - 62118 -0.3 + Prom 62037 - 62096 3.7 61 16 Op 16 1/0.143 + CDS 62162 - 65014 3722 ## COG0178 Excinuclease ATPase subunit + Prom 65063 - 65122 4.8 62 17 Tu 1 . + CDS 65149 - 66975 1647 ## COG0322 Nuclease subunit of the excinuclease complex + Term 67065 - 67133 15.7 - Term 67060 - 67113 11.5 63 18 Tu 1 . - CDS 67119 - 68477 1225 ## COG0534 Na+-driven multidrug efflux pump - Prom 68519 - 68578 9.8 + Prom 68662 - 68721 12.1 64 19 Tu 1 1/0.143 + CDS 68749 - 69408 847 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 69416 - 69460 4.2 + Prom 69443 - 69502 6.1 65 20 Op 1 . + CDS 69609 - 70277 756 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 66 20 Op 2 . + CDS 70277 - 71797 1556 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 67 20 Op 3 . + CDS 71877 - 73427 687 ## CJJ81176_1513 hypothetical protein 68 20 Op 4 . + CDS 73411 - 74322 231 ## BC1262 hypothetical protein + Prom 74425 - 74484 4.8 69 21 Op 1 . + CDS 74517 - 75248 458 ## COG3587 Restriction endonuclease 70 21 Op 2 . + CDS 75268 - 77061 869 ## COG1479 Uncharacterized conserved protein + Term 77071 - 77108 6.2 + Prom 77075 - 77134 8.4 71 22 Op 1 . + CDS 77172 - 77816 287 ## Vpar_0731 hypothetical protein 72 22 Op 2 . + CDS 77826 - 78305 567 ## COG3467 Predicted flavin-nucleotide-binding protein + Term 78314 - 78349 4.1 + Prom 78316 - 78375 4.9 73 23 Tu 1 . + CDS 78412 - 79065 392 ## Vpar_0717 hypothetical protein + Term 79083 - 79155 8.1 74 24 Op 1 . - CDS 79172 - 79522 308 ## Vpar_0719 TonB-dependent receptor plug 75 24 Op 2 . - CDS 79550 - 81457 1492 ## COG4206 Outer membrane cobalamin receptor protein - Prom 81495 - 81554 9.9 + Prom 81428 - 81487 13.2 76 25 Op 1 . + CDS 81665 - 82081 286 ## Vpar_0720 hypothetical protein 77 25 Op 2 . + CDS 82126 - 82761 201 ## NT05HA_1479 hypothetical protein + Term 82876 - 82909 1.2 + Prom 82878 - 82937 6.0 78 26 Op 1 . + CDS 82982 - 84043 974 ## Vpar_0733 ankyrin 79 26 Op 2 . + CDS 84072 - 84491 359 ## Vpar_0723 hypothetical protein 80 26 Op 3 . + CDS 84484 - 84843 231 ## Vpar_0724 hypothetical protein 81 26 Op 4 . + CDS 84891 - 85361 304 ## Vpar_0725 hypothetical protein 82 26 Op 5 . + CDS 85391 - 86899 1659 ## Vpar_0736 hypothetical protein 83 26 Op 6 . + CDS 86956 - 87978 833 ## Vpar_0738 hypothetical protein 84 27 Tu 1 . + CDS 88045 - 88530 470 ## COG3760 Uncharacterized conserved protein + Term 88537 - 88601 -0.9 + Prom 88574 - 88633 9.8 85 28 Op 1 . + CDS 88660 - 90000 897 ## COG1032 Fe-S oxidoreductase 86 28 Op 2 . + CDS 90011 - 90778 963 ## Vpar_0740 antibiotic biosynthesis monooxygenase + Term 90809 - 90847 7.0 + Prom 90807 - 90866 4.2 87 29 Op 1 2/0.000 + CDS 90887 - 91666 588 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 88 29 Op 2 . + CDS 91638 - 92489 802 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 89 29 Op 3 . + CDS 92507 - 93004 680 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Term 93028 - 93084 4.1 90 30 Tu 1 . - CDS 93177 - 93839 685 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) - Prom 93877 - 93936 13.6 + Prom 93990 - 94049 7.3 91 31 Tu 1 . + CDS 94127 - 95149 1390 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 95196 - 95248 14.6 - Term 95193 - 95228 6.0 92 32 Tu 1 . - CDS 95294 - 95686 550 ## COG5496 Predicted thioesterase - Prom 95820 - 95879 7.9 + Prom 95851 - 95910 9.1 93 33 Tu 1 . + CDS 95933 - 96670 729 ## COG0398 Uncharacterized conserved protein + Prom 96684 - 96743 6.7 94 34 Op 1 . + CDS 96822 - 98015 1473 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 98044 - 98103 4.7 95 34 Op 2 . + CDS 98135 - 98968 1053 ## COG0489 ATPases involved in chromosome partitioning + Term 98977 - 99030 14.8 + Prom 99110 - 99169 7.8 96 35 Tu 1 . + CDS 99202 - 100602 1793 ## COG0471 Di- and tricarboxylate transporters + Term 100694 - 100726 4.1 + Prom 100716 - 100775 8.6 97 36 Op 1 . + CDS 100836 - 102185 1405 ## COG1362 Aspartyl aminopeptidase + Prom 102263 - 102322 9.0 98 36 Op 2 . + CDS 102467 - 105913 4367 ## COG1038 Pyruvate carboxylase + Term 105972 - 106040 15.3 + Prom 105920 - 105979 4.5 99 37 Op 1 . + CDS 106112 - 106603 646 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 100 37 Op 2 . + CDS 106664 - 107590 972 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog 101 37 Op 3 5/0.000 + CDS 107590 - 108159 825 ## COG0279 Phosphoheptose isomerase + Term 108186 - 108240 3.1 + Prom 108163 - 108222 3.5 102 37 Op 4 4/0.000 + CDS 108253 - 109731 1596 ## COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 103 37 Op 5 4/0.000 + CDS 109728 - 110693 1168 ## COG0451 Nucleoside-diphosphate-sugar epimerases 104 37 Op 6 . + CDS 110693 - 111187 471 ## COG0241 Histidinol phosphatase and related phosphatases 105 37 Op 7 11/0.000 + CDS 111258 - 112277 847 ## COG0859 ADP-heptose:LPS heptosyltransferase 106 37 Op 8 . + CDS 112277 - 113317 1052 ## COG0859 ADP-heptose:LPS heptosyltransferase 107 37 Op 9 . + CDS 113322 - 114305 680 ## Vpar_0761 exonuclease RNase T and DNA polymerase III 108 37 Op 10 . + CDS 114377 - 115768 1622 ## COG1362 Aspartyl aminopeptidase + Term 115776 - 115813 2.1 109 38 Tu 1 . + CDS 115819 - 116196 486 ## Vpar_0763 hypothetical protein + Prom 116236 - 116295 7.7 110 39 Op 1 . + CDS 116328 - 117305 1215 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 111 39 Op 2 9/0.000 + CDS 117330 - 118310 1508 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 112 39 Op 3 13/0.000 + CDS 118322 - 119194 1228 ## COG4120 ABC-type uncharacterized transport system, permease component 113 39 Op 4 . + CDS 119205 - 120002 261 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 120026 - 120085 5.8 114 40 Op 1 26/0.000 + CDS 120174 - 120440 441 ## PROTEIN SUPPORTED gi|227371401|ref|ZP_03854885.1| SSU ribosomal protein S15P + Term 120449 - 120479 3.0 + Prom 120458 - 120517 11.5 115 40 Op 2 2/0.000 + CDS 120552 - 122621 1654 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase 116 40 Op 3 . + CDS 122632 - 123081 531 ## COG0756 dUTPase + Term 123108 - 123154 12.0 + Prom 123139 - 123198 6.1 117 41 Op 1 2/0.000 + CDS 123228 - 124853 994 ## COG0500 SAM-dependent methyltransferases 118 41 Op 2 . + CDS 124862 - 125395 655 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 125486 - 125524 0.2 + Prom 125422 - 125481 7.4 119 42 Tu 1 . + CDS 125526 - 126698 986 ## COG1015 Phosphopentomutase + Term 126768 - 126809 -0.4 - Term 126922 - 126955 2.3 120 43 Op 1 . - CDS 126994 - 129198 2164 ## COG5324 Uncharacterized conserved protein - Prom 129238 - 129297 7.6 121 43 Op 2 . - CDS 129344 - 129604 401 ## PROTEIN SUPPORTED gi|227371391|ref|ZP_03854875.1| SSU ribosomal protein S20P - Prom 129759 - 129818 10.8 + Prom 129792 - 129851 8.4 122 44 Op 1 4/0.000 + CDS 129872 - 132493 3327 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 123 44 Op 2 1/0.143 + CDS 132523 - 133125 472 ## COG0237 Dephospho-CoA kinase + Term 133144 - 133184 3.3 + Prom 133163 - 133222 8.2 124 45 Op 1 . + CDS 133287 - 133841 482 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 125 45 Op 2 . + CDS 133825 - 134520 648 ## Vpar_0781 hypothetical protein + Term 134721 - 134762 4.3 + Prom 134644 - 134703 9.3 126 46 Op 1 32/0.000 + CDS 134828 - 135286 588 ## COG0779 Uncharacterized protein conserved in bacteria 127 46 Op 2 22/0.000 + CDS 135304 - 136380 790 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 128 46 Op 3 8/0.000 + CDS 136383 - 136652 210 ## PROTEIN SUPPORTED gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein 129 46 Op 4 10/0.000 + CDS 136665 - 136970 489 ## PROTEIN SUPPORTED gi|227371383|ref|ZP_03854867.1| ribosomal protein HS6-type (S12/L30/L7a) 130 46 Op 5 32/0.000 + CDS 136986 - 139448 3327 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 131 46 Op 6 4/0.000 + CDS 139458 - 139814 548 ## COG0858 Ribosome-binding factor A 132 46 Op 7 1/0.143 + CDS 139832 - 140773 937 ## COG0618 Exopolyphosphatase-related proteins 133 46 Op 8 12/0.000 + CDS 140776 - 141717 758 ## COG0130 Pseudouridine synthase 134 46 Op 9 . + CDS 141720 - 142652 420 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 135 46 Op 10 . + CDS 142665 - 143429 934 ## COG0703 Shikimate kinase 136 46 Op 11 . + CDS 143429 - 145582 2104 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 137 46 Op 12 . + CDS 145582 - 146277 551 ## COG1040 Predicted amidophosphoribosyltransferases - Term 146214 - 146257 1.0 138 47 Tu 1 . - CDS 146319 - 146921 679 ## COG2206 HD-GYP domain - Prom 147015 - 147074 8.3 + Prom 147002 - 147061 8.8 139 48 Tu 1 . + CDS 147172 - 147267 74 ## + Prom 147731 - 147790 14.6 140 49 Op 1 31/0.000 + CDS 147825 - 148631 923 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 141 49 Op 2 34/0.000 + CDS 148643 - 149299 795 ## COG0765 ABC-type amino acid transport system, permease component 142 49 Op 3 . + CDS 149296 - 150021 638 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 150034 - 150081 8.2 + Prom 150430 - 150489 7.6 143 50 Tu 1 . + CDS 150538 - 150735 377 ## COG1278 Cold shock proteins + Term 150773 - 150814 8.1 + Prom 150742 - 150801 7.4 144 51 Op 1 7/0.000 + CDS 150977 - 151504 868 ## PROTEIN SUPPORTED gi|227371369|ref|ZP_03854853.1| sigma 54 modulation protein; SSU ribosomal protein S30P + Term 151571 - 151612 8.0 + Prom 151625 - 151684 7.9 145 51 Op 2 6/0.000 + CDS 151723 - 154158 2837 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Term 154166 - 154223 6.7 + Prom 154195 - 154254 4.8 146 52 Op 1 . + CDS 154394 - 155386 1130 ## COG1186 Protein chain release factor B 147 52 Op 2 . + CDS 155395 - 156090 851 ## Vpar_0802 hypothetical protein 148 52 Op 3 . + CDS 156103 - 158145 1711 ## Vpar_0803 hypothetical protein 149 52 Op 4 . + CDS 158138 - 159238 1095 ## COG2327 Uncharacterized conserved protein 150 52 Op 5 12/0.000 + CDS 159272 - 160108 1182 ## COG3959 Transketolase, N-terminal subunit 151 52 Op 6 . + CDS 160108 - 161040 1258 ## COG3958 Transketolase, C-terminal subunit 152 52 Op 7 28/0.000 + CDS 161055 - 161741 348 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 153 52 Op 8 2/0.000 + CDS 161779 - 162618 1007 ## COG2177 Cell division protein 154 52 Op 9 1/0.143 + CDS 162624 - 163805 1541 ## COG0739 Membrane proteins related to metalloendopeptidases 155 52 Op 10 . + CDS 163807 - 164946 1054 ## COG0793 Periplasmic protease 156 52 Op 11 1/0.143 + CDS 164964 - 166235 1568 ## COG0536 Predicted GTPase 157 52 Op 12 . + CDS 166244 - 166528 176 ## PROTEIN SUPPORTED gi|55821596|ref|YP_140038.1| hypothetical protein stu1620 158 52 Op 13 22/0.000 + CDS 166600 - 167721 1263 ## COG0263 Glutamate 5-kinase 159 52 Op 14 6/0.000 + CDS 167731 - 168990 1328 ## COG0014 Gamma-glutamyl phosphate reductase + Prom 168998 - 169057 4.8 160 52 Op 15 9/0.000 + CDS 169130 - 169744 669 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 161 52 Op 16 3/0.000 + CDS 169748 - 170317 584 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 162 52 Op 17 3/0.000 + CDS 170330 - 171451 1007 ## COG1316 Transcriptional regulator 163 52 Op 18 1/0.143 + CDS 171468 - 171830 496 ## COG0799 Uncharacterized homolog of plant Iojap protein 164 52 Op 19 . + CDS 171832 - 172740 498 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains 165 52 Op 20 17/0.000 + CDS 172746 - 174086 1259 ## COG0569 K+ transport systems, NAD-binding component 166 52 Op 21 . + CDS 174099 - 175586 1118 ## COG0168 Trk-type K+ transport systems, membrane components 167 52 Op 22 . + CDS 175602 - 176198 602 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 176271 - 176337 30.0 + TRNA 176249 - 176324 69.7 # Asp GTC 0 0 + TRNA 176330 - 176405 89.0 # Phe GAA 0 0 + TRNA 176413 - 176487 94.1 # Gly GCC 0 0 + TRNA 176497 - 176571 76.5 # Cys GCA 0 0 + TRNA 176586 - 176674 76.0 # Leu TAA 0 0 + Prom 176601 - 176660 80.4 168 53 Tu 1 . + CDS 176782 - 177237 329 ## COG1683 Uncharacterized conserved protein - Term 177219 - 177251 4.2 169 54 Tu 1 . - CDS 177332 - 179164 1269 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase - Prom 179219 - 179278 10.9 + Prom 179243 - 179302 12.3 170 55 Op 1 21/0.000 + CDS 179334 - 180059 637 ## COG1354 Uncharacterized conserved protein 171 55 Op 2 12/0.000 + CDS 180072 - 180581 575 ## COG1386 Predicted transcriptional regulator containing the HTH domain 172 55 Op 3 . + CDS 180583 - 181311 826 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 173 55 Op 4 1/0.143 + CDS 181308 - 182555 1186 ## COG2081 Predicted flavoproteins 174 55 Op 5 3/0.000 + CDS 182564 - 183247 255 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 175 55 Op 6 . + CDS 183240 - 183860 649 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 176 55 Op 7 . + CDS 183851 - 185749 3158 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P + Term 185767 - 185805 9.3 + Prom 185774 - 185833 5.5 177 56 Op 1 2/0.000 + CDS 185863 - 187197 1504 ## COG1160 Predicted GTPases 178 56 Op 2 1/0.143 + CDS 187197 - 187793 679 ## COG0344 Predicted membrane protein 179 56 Op 3 . + CDS 187797 - 188795 1280 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 188804 - 188858 4.7 180 57 Op 1 14/0.000 + CDS 188863 - 189414 258 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 181 57 Op 2 . + CDS 189419 - 189910 383 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 182 57 Op 3 . + CDS 189922 - 190389 831 ## Vpar_0837 hypothetical protein + Term 190400 - 190438 5.1 - Term 190516 - 190556 5.8 183 58 Tu 1 . - CDS 190557 - 192272 1602 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP - Prom 192364 - 192423 5.2 + Prom 192279 - 192338 6.5 184 59 Op 1 4/0.000 + CDS 192400 - 193281 822 ## COG1561 Uncharacterized stress-induced protein 185 59 Op 2 4/0.000 + CDS 193296 - 193565 469 ## COG2052 Uncharacterized protein conserved in bacteria 186 59 Op 3 . + CDS 193574 - 194203 713 ## COG0194 Guanylate kinase 187 59 Op 4 . + CDS 194208 - 194423 346 ## Vpar_0842 DNA-directed RNA polymerase, omega subunit + Term 194433 - 194467 5.5 188 60 Op 1 . + CDS 194476 - 195675 1306 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 189 60 Op 2 . + CDS 195727 - 197391 1487 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Term 197534 - 197577 8.5 190 61 Op 1 2/0.000 + CDS 197586 - 198776 1606 ## COG0192 S-adenosylmethionine synthetase + Term 198784 - 198822 7.0 191 61 Op 2 4/0.000 + CDS 198839 - 201022 1811 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 192 61 Op 3 26/0.000 + CDS 201036 - 201524 689 ## COG0242 N-formylmethionyl-tRNA deformylase 193 61 Op 4 . + CDS 201517 - 202527 828 ## COG0223 Methionyl-tRNA formyltransferase 194 61 Op 5 . + CDS 202511 - 203305 414 ## COG1852 Uncharacterized conserved protein 195 61 Op 6 4/0.000 + CDS 203286 - 204641 1244 ## COG0144 tRNA and rRNA cytosine-C5-methylases 196 61 Op 7 5/0.000 + CDS 204660 - 205706 935 ## COG0820 Predicted Fe-S-cluster redox enzyme 197 61 Op 8 17/0.000 + CDS 205699 - 206400 683 ## COG0631 Serine/threonine protein phosphatase 198 61 Op 9 7/0.000 + CDS 206419 - 208353 2041 ## COG0515 Serine/threonine protein kinase 199 61 Op 10 10/0.000 + CDS 208362 - 209225 676 ## COG1162 Predicted GTPases 200 61 Op 11 . + CDS 209227 - 209877 621 ## COG0036 Pentose-5-phosphate-3-epimerase + Term 209957 - 210008 12.6 + Prom 209970 - 210029 6.3 201 62 Op 1 38/0.000 + CDS 210131 - 210883 1205 ## PROTEIN SUPPORTED gi|227371312|ref|ZP_03854796.1| SSU ribosomal protein S2P + Term 210930 - 210970 6.1 + Prom 210898 - 210957 2.1 202 62 Op 2 24/0.000 + CDS 210982 - 211662 339 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts + Term 211674 - 211713 6.2 203 62 Op 3 33/0.000 + CDS 211725 - 212450 1084 ## COG0528 Uridylate kinase 204 62 Op 4 19/0.000 + CDS 212456 - 213016 859 ## COG0233 Ribosome recycling factor + Term 213050 - 213094 10.2 + Prom 213046 - 213105 3.7 205 63 Op 1 32/0.000 + CDS 213248 - 214012 708 ## COG0020 Undecaprenyl pyrophosphate synthase 206 63 Op 2 15/0.000 + CDS 214016 - 214840 742 ## COG0575 CDP-diglyceride synthetase 207 63 Op 3 17/0.000 + CDS 214859 - 216004 1240 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 208 63 Op 4 6/0.000 + CDS 216013 - 217029 1086 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 209 63 Op 5 . + CDS 217048 - 218133 1235 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 210 63 Op 6 . + CDS 218127 - 219845 2058 ## COG0442 Prolyl-tRNA synthetase + Term 219848 - 219899 12.8 + Prom 219876 - 219935 7.8 211 64 Op 1 . + CDS 219962 - 220789 885 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 212 64 Op 2 . + CDS 220805 - 221680 1079 ## Vpar_0868 hypothetical protein 213 64 Op 3 . + CDS 221689 - 223002 653 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 + Prom 223090 - 223149 7.8 214 65 Op 1 . + CDS 223231 - 224031 570 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis 215 65 Op 2 6/0.000 + CDS 224058 - 226691 2336 ## COG0249 Mismatch repair ATPase (MutS family) 216 65 Op 3 1/0.143 + CDS 226691 - 228736 1871 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 217 65 Op 4 2/0.000 + CDS 228738 - 229550 564 ## COG0500 SAM-dependent methyltransferases 218 65 Op 5 . + CDS 229547 - 230476 658 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 219 65 Op 6 . + CDS 230473 - 231711 1614 ## COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance + Term 231718 - 231757 5.3 + Prom 231738 - 231797 11.8 220 66 Op 1 . + CDS 231910 - 232971 1134 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 221 66 Op 2 4/0.000 + CDS 233010 - 234809 1830 ## COG0481 Membrane GTPase LepA 222 66 Op 3 . + CDS 234814 - 235998 957 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 223 66 Op 4 . + CDS 236080 - 236682 579 ## COG1251 NAD(P)H-nitrite reductase 224 67 Op 1 21/0.000 + CDS 237080 - 238108 768 ## COG1420 Transcriptional regulator of heat shock gene 225 67 Op 2 29/0.000 + CDS 238108 - 238653 684 ## COG0576 Molecular chaperone GrpE (heat shock protein) 226 67 Op 3 31/0.000 + CDS 238681 - 240522 2744 ## COG0443 Molecular chaperone 227 67 Op 4 5/0.000 + CDS 240539 - 241696 1319 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 228 67 Op 5 9/0.000 + CDS 241752 - 242615 1435 ## PROTEIN SUPPORTED gi|227371283|ref|ZP_03854767.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase 229 67 Op 6 5/0.000 + CDS 242612 - 243343 498 ## COG1385 Uncharacterized protein conserved in bacteria 230 67 Op 7 1/0.143 + CDS 243368 - 244663 942 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 231 67 Op 8 1/0.143 + CDS 244675 - 245019 434 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases + Prom 245061 - 245120 9.5 232 68 Op 1 9/0.000 + CDS 245177 - 245356 292 ## PROTEIN SUPPORTED gi|227371279|ref|ZP_03854763.1| SSU ribosomal protein S21P + Term 245393 - 245425 -0.8 + Prom 245359 - 245418 1.5 233 68 Op 2 . + CDS 245439 - 245882 293 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 + Prom 246029 - 246088 8.2 234 69 Tu 1 . + CDS 246119 - 248023 2431 ## COG0174 Glutamine synthetase + Term 248037 - 248095 14.3 - Term 248021 - 248085 13.4 235 70 Tu 1 . - CDS 248129 - 248524 399 ## COG3223 Predicted membrane protein - Prom 248548 - 248607 5.0 - Term 248545 - 248609 9.0 236 71 Tu 1 . - CDS 248635 - 249150 896 ## COG2077 Peroxiredoxin + Prom 249308 - 249367 6.9 237 72 Op 1 35/0.000 + CDS 249562 - 251289 176 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 238 72 Op 2 . + CDS 251276 - 253021 217 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 239 72 Op 3 . + CDS 253023 - 253817 752 ## COG0566 rRNA methylases + Term 253843 - 253899 10.1 + Prom 253862 - 253921 7.6 240 73 Op 1 . + CDS 253977 - 254831 652 ## COG3394 Uncharacterized protein conserved in bacteria 241 73 Op 2 . + CDS 254858 - 255820 591 ## COG0392 Predicted integral membrane protein 242 73 Op 3 . + CDS 255834 - 256283 475 ## COG4492 ACT domain-containing protein 243 73 Op 4 13/0.000 + CDS 256308 - 257597 1507 ## COG0460 Homoserine dehydrogenase 244 73 Op 5 . + CDS 257600 - 258514 824 ## COG0083 Homoserine kinase 245 73 Op 6 . + CDS 258570 - 259445 834 ## COG0501 Zn-dependent protease with chaperone function 246 73 Op 7 . + CDS 259468 - 259875 582 ## COG0105 Nucleoside diphosphate kinase 247 73 Op 8 . + CDS 259940 - 260455 633 ## COG2096 Uncharacterized conserved protein + Term 260561 - 260597 1.0 - Term 260447 - 260490 6.3 248 74 Tu 1 . - CDS 260502 - 260837 368 ## Vpar_0904 hypothetical protein - Prom 260868 - 260927 8.7 + Prom 260807 - 260866 9.6 249 75 Op 1 4/0.000 + CDS 260901 - 261479 375 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 250 75 Op 2 2/0.000 + CDS 261472 - 262989 1689 ## COG1492 Cobyric acid synthase 251 75 Op 3 3/0.000 + CDS 263002 - 263994 777 ## COG1270 Cobalamin biosynthesis protein CobD/CbiB 252 75 Op 4 . + CDS 263994 - 264887 708 ## COG0368 Cobalamin-5-phosphate synthase 253 75 Op 5 1/0.143 + CDS 264961 - 265845 668 ## COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase 254 75 Op 6 1/0.143 + CDS 265870 - 267000 886 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 255 75 Op 7 . + CDS 267008 - 267646 756 ## COG0406 Fructose-2,6-bisphosphatase 256 75 Op 8 . + CDS 267646 - 268344 538 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 257 75 Op 9 10/0.000 + CDS 268415 - 269488 1151 ## COG0006 Xaa-Pro aminopeptidase 258 75 Op 10 4/0.000 + CDS 269504 - 270061 865 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) + Prom 270103 - 270162 2.2 259 75 Op 11 . + CDS 270182 - 270577 353 ## COG1302 Uncharacterized protein conserved in bacteria 260 75 Op 12 . + CDS 270589 - 270984 533 ## Vpar_0916 protein of unknown function DUF322 261 75 Op 13 . + CDS 270974 - 271378 496 ## COG0781 Transcription termination factor 262 75 Op 14 . + CDS 271378 - 272331 819 ## COG0533 Metal-dependent proteases with possible chaperone activity 263 75 Op 15 . + CDS 272334 - 273557 1051 ## COG1570 Exonuclease VII, large subunit 264 75 Op 16 . + CDS 273532 - 273738 367 ## Vpar_0920 exonuclease VII small subunit 265 75 Op 17 1/0.143 + CDS 273748 - 274626 969 ## COG0142 Geranylgeranyl pyrophosphate synthase 266 75 Op 18 . + CDS 274655 - 275134 503 ## COG1963 Uncharacterized protein conserved in bacteria 267 75 Op 19 5/0.000 + CDS 275131 - 275934 654 ## COG1189 Predicted rRNA methylase 268 75 Op 20 . + CDS 275944 - 276828 913 ## COG0061 Predicted sugar kinase 269 75 Op 21 . + CDS 276853 - 277428 349 ## COG0500 SAM-dependent methyltransferases + Term 277477 - 277515 2.1 + Prom 277466 - 277525 11.0 270 76 Op 1 8/0.000 + CDS 277749 - 278204 614 ## COG1438 Arginine repressor 271 76 Op 2 . + CDS 278209 - 279873 1721 ## COG0497 ATPase involved in DNA repair + Term 280033 - 280101 9.0 + Prom 280066 - 280125 6.0 272 77 Op 1 3/0.000 + CDS 280164 - 280961 1024 ## COG0289 Dihydrodipicolinate reductase 273 77 Op 2 3/0.000 + CDS 280985 - 282016 1395 ## COG0136 Aspartate-semialdehyde dehydrogenase 274 77 Op 3 . + CDS 282038 - 282925 1002 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Predicted protein(s) >gi|292596546|gb|ADCV01000002.1| GENE 1 20 - 151 131 43 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 1 43 111 153 157 59 60.0 1e-09 MDTVGRYEGAIKEYIRNQLQEDIAQDTLNFKEYTDPFTGEPVK >gi|292596546|gb|ADCV01000002.1| GENE 2 315 - 1421 1043 368 aa, chain + ## HITS:1 COG:SPy0524 KEGG:ns NR:ns ## COG: SPy0524 COG0183 # Protein_GI_number: 15674625 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Streptococcus pyogenes M1 GAS # 3 348 4 344 382 334 50.0 2e-91 MSVYIHGGLRSPIGVLNGQYKHMRPEILGSQVIDEIINRYTISHIDGIFCGNAVGTGGNL GRLMGLMCNLPNSVPAITVDMQCASALMSIEIAYAHIVSGIMDSAIAGGIESSSLQPERV YASGDDREGAYKVAQFTPQDQSHLAMLEGAERTIHKHNVTKEDLYPHIIGSHQRASAALD NPYLQSHIMPITIDGKRCIDECIRPTMNKKLLSRMKPLLGADSITNAGNACLTHDGAAFV YLSNKKGPFKIHSVKPWAGNPQFSPEGALESTEAILKRTGLTMDDIDVVEWNEAFAIIDV LFDKTYPNHIGKYNLFGGALAYGHPYGCSGAILVLHCMAALESCGGRYGLCAIAGAGGTG SALIMERM >gi|292596546|gb|ADCV01000002.1| GENE 3 1423 - 2718 564 431 aa, chain + ## HITS:1 COG:SPy0526 KEGG:ns NR:ns ## COG: SPy0526 COG0318 # Protein_GI_number: 15674626 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Streptococcus pyogenes M1 GAS # 3 427 1 413 415 225 30.0 1e-58 MTIIERLQQYKELEPHKIALIVDDIQYTYGELYDAILSVNINNTSHIVNFTQSKETLKTK VLLIKELSFVEQLTQWLGAIYKDNIPMVCHNEMDKAYVDELARIIAYEGVPPLADFGVLT SGTTGRPKPLWRRERSWRDFFDIQNNIFHINKDVKIFLQGSFSFTGVSNMVIAALWAGGT VVTTSSLRPSRWIQLIEEYNVDHIYALPTKLRLLVRHCKSNLSSIKYIIAGSQVLNRQLM EQLQHICPDMEFILYYGASELNYITYCTGKEWLEREGTVGRPFPTIQIAETDNVIYVTTK YHIEGISNTYTVNDCGYIDSDGYLMFNGRAGDVINKGGYKISIPEMELYLQSLQGVSEVA IIDITDEIRGEDYVVYMVLDGEARLNEVIDLIHNKRPSMEWPKAIIEVPMLPLTECSKVD KRKLKEWYNKG >gi|292596546|gb|ADCV01000002.1| GENE 4 2746 - 3744 1149 332 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0653 NR:ns ## KEGG: Vpar_0653 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 332 1 332 332 620 98.0 1e-176 MQINKAALEIFDFTSSLAVYSEHELKVGDQAIQDYIANHVVKAFKDPGARTGTLHDASPV GKQLLDYKNGALKFIDLCKNLGESLFSYMKQATDSVVIDTIICEAVTDTPYVCILLCQAH DAFTHQLFSEDDGTLATELVSHKAVLPMPSQKLRAFASINLHDFSVRIFEPKGEFDGEVS YILADKVLQLGTNQSSRDTVRKVKTIVDKVAQAHESDSVVELTTAKSMIAKNAEVSDTVD PVRIVEEVFKANPIQQEAAKKELADADMLRPLPVNREFATKVGEHHKIKTDTGIEISFPV EYMKNREFIEIKTNDDGTLRIELKNINKIVNK >gi|292596546|gb|ADCV01000002.1| GENE 5 3826 - 4317 609 163 aa, chain + ## HITS:1 COG:lin0783 KEGG:ns NR:ns ## COG: lin0783 COG2606 # Protein_GI_number: 16799857 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 162 2 158 158 162 50.0 2e-40 MSKEKHKKTNALRILDTHKIPYSISEYEWSEERAAGLHVVEALKLDEKQVFKTLVGKGDK IGYVVFCIPVAEELDMKQAARVSHNKSVELVHVKDLLGITGYLRGGCSPVGMKKAFPTYF DATMEPQKFVYVSAGLRGMQMKVDPKDLASVVNAEFVELTMDH >gi|292596546|gb|ADCV01000002.1| GENE 6 4328 - 5053 448 241 aa, chain + ## HITS:1 COG:TM1296 KEGG:ns NR:ns ## COG: TM1296 COG3341 # Protein_GI_number: 15644051 # Func_class: R General function prediction only # Function: Predicted double-stranded RNA/RNA-DNA hybrid binding protein # Organism: Thermotoga maritima # 1 239 3 196 223 124 32.0 1e-28 MAKKFYAVRQGRVPGVYTTWSDCEKQVKGYGGAIYKSFSTEAEARAFVEDSGLSLSDFMS AKKSELKSPQEVKFKSKNSRPIVSSSSIQSKVSANVVKPDFTTPNYMVAYIDGSYNKETN TVGAGGVIFLNGKRKTFSFSSTDKRYTSFWNVAGELLAAMHVMKYAVDNGISECSLYYDY MGIEMWATKGWKRNNELTQEYSAFYDSIKNRVRVYFHKVAAHTGDTYNEMADALAKQGAG I >gi|292596546|gb|ADCV01000002.1| GENE 7 5076 - 5999 867 307 aa, chain + ## HITS:1 COG:BH3379 KEGG:ns NR:ns ## COG: BH3379 COG0451 # Protein_GI_number: 15615941 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 3 303 5 305 308 258 44.0 1e-68 MNICVTGGAGFIGSHLVDRLIELGHDVLVIDNLSTGMRSFVHEDAQFIEMDVRDPKLLSV FEEFKPSIVFHEAAQTMVQSSMENPSYDCDVNLIGLINVLDACRKVNVEQFLMPSSAAVY GDLAVLPLTEDLSGMPSSFYGLTKLTAEGYLRIYHEAFGLNTVCFRYANVYGPRQGDGGE GGVISIFNRLIVEGQPLTVFGDGEQTRDFIYVDDVVDANIKAMGNGQCTGIYNISTNKGT SVNELITRFRTISGTDFMVYYEDERIGDIKHSRLSNVKAERDFGFTATTTLEDGLQKTLE YFKAHHK >gi|292596546|gb|ADCV01000002.1| GENE 8 6020 - 6298 299 92 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0657 NR:ns ## KEGG: Vpar_0657 # Name: not_defined # Def: protein of unknown function DUF1294 # Organism: V.parvula # Pathway: not_defined # 1 92 1 90 90 142 95.0 3e-33 MSDTQFWVTVGVWNLIVFSMYGYDKLCAINGYDRISEFTLLFLAFAFGGVGALLGMVLWR HKTLKLKFKLAIPFALLWSVYAVGFGYGLWVK >gi|292596546|gb|ADCV01000002.1| GENE 9 6382 - 7818 1568 478 aa, chain + ## HITS:1 COG:TM1385 KEGG:ns NR:ns ## COG: TM1385 COG0166 # Protein_GI_number: 15644137 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Thermotoga maritima # 76 471 41 431 448 191 32.0 3e-48 MLRLQSGFELDYANIYNESCIQERDVNNFERAIQNVWRHTNILRSTGFEEGHVSKDGLPE PVLFYQLPYISEDGINTPDMLERLYELRDYARHNIDTVVSVGIGGSYLGSKVIFDVQCGA FWNNYSAEERDGYPRMYFAGFNVDGDYLVGLIRTLECQAQKKGPDYKVMLVINSKSGSTI EPMANFMILEKALQDRNINYEVIAVTDVSDDEHPTILRSMAIENNWKTYSIPYGVGGRFS VFTEVGFVTAALVGFDIEGFLAGAASMDAACQEEDIFKNPGLLSALLKYIASERYGRIIE VFMPYSEALHSLSDWYVQLLSESLGKMSNTCLPYGRTPVAAVGTMDMHAQVQEHQEGRLN KVVQFIKVKEWKHNLIVPDSYSQYERLHSLSDVGICDILNIALDANREALSSDNRFNMTI TVPTLNAFHLGEIMFMHCWAVYFESIFAGVDAFDQPGVEVYKRLIGPKLARAKDVHNS >gi|292596546|gb|ADCV01000002.1| GENE 10 7828 - 8817 1176 329 aa, chain + ## HITS:1 COG:CAC2960 KEGG:ns NR:ns ## COG: CAC2960 COG1087 # Protein_GI_number: 15896213 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Clostridium acetobutylicum # 1 328 1 329 329 386 57.0 1e-107 MNILVTGGAGYIGSHTVRALQQAGYTPIIVDNLSRGHVESIPEGVKFYNMDIADPKLVGI MKEHNILGVMHFAAHSQVGESMQNPAIYYENNVVGSYHLIESARTAGIKHFVFSSTAAVH GEPKVVPIREDAQLQPTNVYGRTKLMIEEMLSDYSSIYGSTYVALRYFNAAGADPSGMIG EDHHPETHLIPLVLDAARGKREHITVFGTDYDTADGTCVRDYIHVNDLATAHVLAMDYLR KGGESQVFNLGSGNGFSVKEIIETAKEVTGIDIPVQYGDRRAGDPGTLIASSEKIKNLLG WDPKFSNVADVIKDAWHWHTSHPDGFSSK >gi|292596546|gb|ADCV01000002.1| GENE 11 8943 - 9791 439 282 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0660 NR:ns ## KEGG: Vpar_0660 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 282 1 282 282 474 91.0 1e-132 MNLRDYIERMKMWIDKQHFIMRHYKFALSIFLIITVALLGIGIFYPHEEENVHISLDQSN GRDGNQDERGSEKLSKETTHGNRTGKGKNYFKDESDIKNVKDREVKSNVHGRLLYDITGV ERANPWREVFKDIPIDDLLGQNKMTKDSNGNFVDINNNLYESDDEKSTFGKTEDKSRRNG KYQQIRNNKKHSGNYIELKSKDTSARRVESSIQPTISNPIKQHPIELIGIIEGQQNIAIL RKGTEEQMVSIGSVWKEISVSKITASGVEIIEGGSSRWLRIE >gi|292596546|gb|ADCV01000002.1| GENE 12 9773 - 11095 975 440 aa, chain + ## HITS:1 COG:TM0088 KEGG:ns NR:ns ## COG: TM0088 COG4796 # Protein_GI_number: 15642863 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Thermotoga maritima # 71 440 917 1283 1285 110 25.0 4e-24 MAKNRVNFLGLKYIDKIIVIVILRISLWMVVMLVTPFMVFANSTDRIGTNRNDRITASSS ETIVNSSEVDKNEKKVGNELITISVRNASLKETVLGICRSYGISVIGVESLKGSITATVK GESPEAIINELGKLYHFSVSKEHNTLLIDSDDETLEKRELYVISPEHLPAESLKNVVGTV VKNDKMAVLSEQNEVIMHLTSGEKRRVETLVRAIDKEPKQVQLEATIIAMEQSYAKEQGF RWSWLSLTGHGEDKTHSYGAVTFGKTPTGEAYKFFVKPELSLMESSGKAVLIAKPSIMAL NGETAHILIGERIPVIEESEVNGERKRSTRYEEVGIKLNYTPIITADDGVDAKIHAEVST PIMVSEMKAYKISTRQAHTRVRLQPGEVLVIGGLMDNRDQHQIQKIPILGDIPLLGKLFR HSRKTKDSIEMLMLVRATVV >gi|292596546|gb|ADCV01000002.1| GENE 13 11124 - 13043 1742 639 aa, chain + ## HITS:1 COG:BS_ydiF KEGG:ns NR:ns ## COG: BS_ydiF COG0488 # Protein_GI_number: 16077662 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 9 637 9 637 642 426 38.0 1e-119 MERIRMIGLGKSFGVRQVFSNVSFELKEGDRLALVGPNGAGKSTLLKCILGYEELDEGNV VKSPVASIGYLQQDVNLGDDSLATKIEKAWADVHALEKQLKELTSRLESEEASESDLQRL DYLQNRLEWLGGYDYEQKTKRIVYGLGFTDDDLDKPANAFSGGQKTRINLAKALVRSPDF LFLDEPTNHLDMDMLEWLEGYLSAYQGGILIVSHDRYFLDRIVTGVVELDNHKATTYRGN YSRYIQQRDERLKADMVAYEKQQEYIKKTEAYIDKYRAGIKSKMARGRQSQLNRLERLEA PVTSHHLQFSFPPAAMSADKVLVLDRLSVGYGESRIINDISLVVRRGESVALIGPNGAGK STLVKTIVGELFPENGHVDIGNRVQVGYFSQEHEELHDSWQVVEEIMNHFNYSEDKARNV LGSFLFKGDDVFKLVGELSGGERARLALLKLFLQGDNFLILDEPTNHLDIPTREIVERAL QQFEGTCFIISHDRYFLDQVSTKTVILDEGKFTEYLGNYSYYKEKLKEKEDLLALANEKN SESSKRDSKATPTNESMLSASETIEENQKKPNAYMVEKQLAEVEAEIARLEATMKMYEVQ LANPVVQQDLDEMSKISIQIEETQTELDSLYEKWERLCE >gi|292596546|gb|ADCV01000002.1| GENE 14 13164 - 14312 1623 382 aa, chain + ## HITS:1 COG:RSp0013 KEGG:ns NR:ns ## COG: RSp0013 COG0683 # Protein_GI_number: 17548234 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Ralstonia solanacearum # 37 359 29 356 386 217 41.0 4e-56 MNKSMLKKAVIFGLAGVMAVAAGCGSNKDAGNANSNEAKIALLTTTTGGAAAYGESIKAG AELAVSEINADANAVKINLLVEDTKGDKNEAINAMNKVISKDKVVAVIGPMLSGEMMAAG PVANKSKIVALGTSTTAEGITDIGDYIFRNAVPESLAVDTAIKEAHKTLGFKTAAIMYSN NNDQMVSVNNTARKALEAVGVQIVDTETFADKDTDFSAQLTKIQQAKPDVIVVASLYQEG ALIMKKMREMGMNQPVVGSNGFNSPEFIKIAGAAADGVIVGTPWFPNKDDQKVKDFRKAY KDKYGKEPDQFAAQAYDAVYLYEAALKKAGSTTDREKFREALKNIADFVGVTGQFKFNEK RDPSMEVQVLQIKNGQFDALKK >gi|292596546|gb|ADCV01000002.1| GENE 15 14329 - 15210 1154 293 aa, chain + ## HITS:1 COG:SP0750 KEGG:ns NR:ns ## COG: SP0750 COG0559 # Protein_GI_number: 15900645 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Streptococcus pneumoniae TIGR4 # 3 289 2 286 289 209 48.0 4e-54 MFLQQLVNGLTLGSLYAVLAIGLTLVFGVLNIINMAHGGIFMIGAFVGLFMVTVFDVNIF VALIVAMAVGAILGYILEFVALRPLRKKKVSHLAPLISTIGVSIFLESLALLLWGPQTRS FPPDYIGGLIDFGAFKISMVQIIGLGVSVVLMLILNVVIKKTKIGKAIRAVSMSTETAAL LGINPTMIISITVMIASALGAAAGVLVGLSFNAIEPTMGVIIGFKGLAVLILGGLGNITG AMVGGFILGVAEIFSVAYGASTFRDAVAFGLIILLLFWRPQGLFGSKDKGGRP >gi|292596546|gb|ADCV01000002.1| GENE 16 15210 - 16220 1126 336 aa, chain + ## HITS:1 COG:RSp0015 KEGG:ns NR:ns ## COG: RSp0015 COG4177 # Protein_GI_number: 17548236 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Ralstonia solanacearum # 8 315 11 289 299 210 43.0 3e-54 MELLNPYYLQIVMFFIINAIMGISIYFTLASGQLSLGAAGFMSVGAYVGAILSLKADLPI VVGIIIGGLVASLVAVIIGLPTTRLKGLYLAIATLGFGEVVRVIFLNLDITNGALGLSGI PSIPQELTNYAYEFDLDGLMGIDAVAWGNLMAIIILLAILVLIIAFCVRINNSRVGRAFA AIKADDHAAELMGINVVYYKMMAFIIGAFIAGIGGGLYAHITNFINPTDFSYHKVVQILL FPVFGGSNVVWGSVLGSFILTLLPEVLRFLSDYRDIIYGALLVILMAVRPDGILTESMVD KISRKLGFKKAPYIPESQVLTERFEAYKRKQQEKQG >gi|292596546|gb|ADCV01000002.1| GENE 17 16232 - 16993 275 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 2 240 1 229 245 110 28 6e-23 MLLELNEVSKSFGGVAALTGVSFGVKQGEVFGVIGPNGAGKTTLFNLITGVFPASSGEIV FDGMSVVGIKPHRTVEMGIARTFQNIRLFGNMTALETVLTGMHCRTGSGFLSSFLKTKRQ RIEEERCRGIAYEFLKLVGLEADAEEVATSLPYGKQRRLEIARALATHPQLILLDEPAAG MNDSETEVLRQLIGKIRDLGITVVVIEHAMELMMNICDRLVVLNFGKKIAEGTPQEIQNN EAVIEAYLGKEEV >gi|292596546|gb|ADCV01000002.1| GENE 18 16995 - 17705 284 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 225 1 231 245 114 29 6e-24 MLKLENIVAGYGHITALKDISLEVPQGSIVSLIGANGAGKTTTMKTIMGLVKPTSGRVIF EGQDITSRQTHQVVQNGISLVPEGRQILQDMSVYENLEMGAYTRKDKEIEADIKKVFKRF PILDERSYQLGGTLSGGQQQMLAIGRALMARPKLLLLDEPSMGLAPLVVNEIFETIKEIS ADGTTVLLVEQNVRQALKIADYAYVLETGKMVLSGSADEVRHNPRVMEAYLGGRVE >gi|292596546|gb|ADCV01000002.1| GENE 19 18117 - 18860 770 247 aa, chain + ## HITS:1 COG:STM2118 KEGG:ns NR:ns ## COG: STM2118 COG1596 # Protein_GI_number: 16765448 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Salmonella typhimurium LT2 # 57 222 84 252 379 98 33.0 1e-20 MKKKQYMMMATFLCTTTMAMAAPVNINTNQPYNAKNVQMEGHAPLENSASVISSDKEYRL RQGDELNIQVVQQAELGTRNGNDIVYTVRPDGYVSFPMVGAVKADGLTIDEFTAELQQGL SRYIINPDITVNVSKLGGVRVYVFGEINKPGAYTLTKSSTVIDAIGAAGSFNWDTAKKKI YLIHQDNPEKPIPINLNRILQTGDMSENYIMREGDILYLTKNSRINFARDIAPILTGAYM VSRIGKD >gi|292596546|gb|ADCV01000002.1| GENE 20 18840 - 18923 62 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGNKYERKKTPPYMIDIALSLILTYS >gi|292596546|gb|ADCV01000002.1| GENE 21 19075 - 20724 1698 549 aa, chain + ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 1 512 57 564 608 500 50.0 1e-141 MHLYTRIWRYAGMREVLAVFVATTIGTALFYSSMFVFGKSLPRSVYFITWFLTTGAVGMG RMLLHYVALHYSSGDDGESGQVNTLIIGAGDAGATIAREIERYHKRSRRVIGYVDDDMFK HNRLMNGFRILGNREDIPTLVAKYKVEEIIIAMPSVKRDIIQEIMEICSPLKCKINILPG MYQLLDDEVLVSHLHPVSIEDLLERDEIQLDTSKVETYLKDKVVLVTGAGGSIGSEICRQ VLRVKPKKLLLLGHGENSIYLIHQELRNIAPQDTLVPIIADIRDKNQLEQIFKNYNPDVV FHAAAHKHVPLMEIQPIAAVLNNIYGTRNVADVAGAHGVDRFVMISTDKAVNPTSVMGAT KRVAEKVVLGMNHIYDTKFITVRFGNVLGSRGSVIPLFRKQIEAGGPVTVTDPEMTRYFM TIPEASQLVLQAGAMGNGGEVFLLDMGEPVKIVDLAKNMIRLSGFEPNKDIRIEFTGLRP GEKLYEELLTAEEGTNTTTHKKIFEAALEDVDREWLSREIERFDTCKTDIDVINVLQDII PTYDPNHNV >gi|292596546|gb|ADCV01000002.1| GENE 22 20875 - 22320 1730 481 aa, chain + ## HITS:1 COG:TM0644_1 KEGG:ns NR:ns ## COG: TM0644_1 COG3206 # Protein_GI_number: 15643409 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Uncharacterized protein involved in exopolysaccharide biosynthesis # Organism: Thermotoga maritima # 13 454 13 484 561 110 21.0 6e-24 MEQIIDLKEVGRVLIKKRRKIINITVACMVLGGAYAFLAPSTYQSTSMLRIKQAQGLSNS VLSSANAYSDSMSRQLMNTDAEILKSRNVVEPVITAIEDPEGTGNAPTYEDFVKTRIETK PYKETELLQVSVTGKSPEQAQEANQLLIDTFLKRLAEISHVEQRTTREFLQKRVVTAKSE LEQAENKLQQFQVDNKVYSTADQMKGLTDKVTLIDREKAQNQLDLETAQAALGSINEQLG SAGKSIADSATVQAYKGQLADLESRKASYIGKYTDEHPAMKEINQQIEEAKSGLNAEINA IASQQAPSSNSAQQGLLADKFKNEAALAVAQGKQSTLAELDKANEEAIKGLPEKERGYIQ AKRDVDVAQDIYQMLSTRLEEAKVAEVMVPNEVQIVDAPTLPEKAIAPRKVLILLGAAIL GVLFGCLYTLVQFFGNRKVQSVQEINDILGIQNLGVIPNHKEVEYEEPTNRFVALLRKVR G >gi|292596546|gb|ADCV01000002.1| GENE 23 22322 - 22933 607 203 aa, chain + ## HITS:1 COG:BH3668 KEGG:ns NR:ns ## COG: BH3668 COG0489 # Protein_GI_number: 15616230 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus halodurans # 4 200 17 216 235 132 35.0 3e-31 MIRLISNERGDTPLVEAYRTLRSNLQYVCNQHKCKLICITAATSGKGTSEVAANTALALS KNNNKVLLVDGNLRNPTQHIAFNVQNKGLTNAVVMDEDLTIHRNVVPHLDVLTAGEVVEY PSDIVDSSKLPAIFEYVRDEYDVVIIDTPPVLSVTDAVVLAEKSDGVVLVVKNEVASPKD LIEAKNRLSQVGISLLGSIVIDA >gi|292596546|gb|ADCV01000002.1| GENE 24 23011 - 24210 1226 399 aa, chain + ## HITS:1 COG:SP1837 KEGG:ns NR:ns ## COG: SP1837 COG0399 # Protein_GI_number: 15901666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 3 395 6 398 408 505 62.0 1e-143 MRINFSPPDITELEINEVVEALKSGWITTGPRTKELEKKIAHQLGTPKSVCLNSATAALE MSLRVLGIGPGDEVITSAYSYTASASPVVHVGATLVLVDTQKDAYEMDYDAVARAITPKT KAIIPVDIAGVPCDYDRLRSIVEEKKSLFTPSSDIQKALGHIPIVADCAHSFGASYKGVR TGNVADFSSFSFHAVKNFTTAEGGCATWRHIDGIDDETIYKQFQLLSLHGQDKDALAKTK AGAWEYDIKGTYYKCNMTDIMAAIGLAQFERYPKLLARRKEIIEAYDTAFKDLPVTLLNH YTDEHESSGHLYLVRLDGRDAEYRNKVIEAMAEAGIATNVHYKPIPMHTAYKNLGFTIDD YPNAYDQFKNEITLPLHTLLTDEEVQYIIEQFKRIITEC >gi|292596546|gb|ADCV01000002.1| GENE 25 24204 - 24890 378 228 aa, chain + ## HITS:1 COG:SP1838 KEGG:ns NR:ns ## COG: SP1838 COG2148 # Protein_GI_number: 15901667 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Streptococcus pneumoniae TIGR4 # 6 228 4 230 230 234 53.0 1e-61 MLVKNFHDLPQELQCEAVRPYFEILNQRRTSLLCKSIFDRVMAAGLLITLSPVFLILAVM IKRDSAGEVFFRQTRVTQYGRTFGIYKFRTMVQNAESLGAQVTSQNDMRVTKVGNMLRSC RLDELPQLINILLGDMSFVGTRPEVPRYVSAYTDEMKATLLLPAGVTSNASITYKDEDQL LQNAQNIDEVYINEVLPGKMAWNLKSIKEFSFLQDIKTMIDTVLAVLR >gi|292596546|gb|ADCV01000002.1| GENE 26 24902 - 25768 804 288 aa, chain + ## HITS:1 COG:SP1367 KEGG:ns NR:ns ## COG: SP1367 COG3475 # Protein_GI_number: 15901221 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 7 278 8 277 281 236 44.0 3e-62 MSTSMTKEIQEKELNMLLYFKEFCDKHNLRFYLCGGGLIGAIRHNGFIPWDDDLDLFMPR PDYEKLAELWPEYADTERFTYCRTDRNHIYHDAGASIRDNNTTFINRHSMHEDVCHGLAL EIMPIDGCAPGKISRLLQLVWAMTFALFNAQRLPDNKGPTYRALAGYIYKIFSSQSIRYH IWRFAEKRMTQYDFDTSDECTELIGSLKGMKLRHPREDFASVIYKDFEGHQIPVMKGYER YLRLIWGDYMQLPPVEQRVAKHDAVFADLHTPYKEYKGIHYAKKEAQP >gi|292596546|gb|ADCV01000002.1| GENE 27 25778 - 26500 309 240 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 5 232 6 226 234 123 34 7e-27 MKRIAVIFAGGVGARMKNSKTPKQFLEWNGRPILIQTLDVFEQTETIDGIVLACKAEWID HTKQLIEKAGLQKVLSIVPGGESALESQYNGLVEAKRLFPDDAVTVLIHDGVRPLVDNST IERNIESVESKGSAITVTPAIETVMVTQNGSIKHILNRNECLMAKAPQSFRLDDIISVHN RAKDEGIHDFIDSASMMMHYGYTLYPVLGETENIKITTPSDYYMFTGIIKNRELGGLKDE >gi|292596546|gb|ADCV01000002.1| GENE 28 26493 - 27542 851 349 aa, chain + ## HITS:1 COG:slr0809 KEGG:ns NR:ns ## COG: slr0809 COG0451 # Protein_GI_number: 16330703 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Synechocystis # 27 303 21 287 328 107 29.0 3e-23 MSNSVIQRELTALVQEKNYFHFLRHQRILITGATGLIGSMFIKLLILANETHDLDLKVIG HVRSHEKAKNILGEYLDNKSLTLVDGSLESIDVPCDYILHGAAPTQSKFFVEHPVETIRT SIYGTEAMLELGRRQKVKKLVYLSSMEQYGVPYESGQVMTEERLGYLDHLNVRSSYSESK RLCECYCKSYAVEYGVPAVIARLAQTFGPGVPVSDNRVFMQFTKSALKHENIVLHTKGDS MSNYCYITDALAGILALMKAGEAGEAYNVCHDEETRSIASIAQLVATHVSNNKSKVVFDI PEDVQGFGYAPTVHMFLSSKKLKSLGWKPKVSMAQAYVRLAEYIQEEGL >gi|292596546|gb|ADCV01000002.1| GENE 29 27539 - 28606 1023 355 aa, chain + ## HITS:1 COG:SMb21250 KEGG:ns NR:ns ## COG: SMb21250 COG0438 # Protein_GI_number: 16264502 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Sinorhizobium meliloti # 5 351 51 400 427 160 32.0 5e-39 MKKEIIIVTISLGNDGAERILTELARQWVHDGHHITVIQTSPNRYGNEYALEESIEQIEI HTTSSNKVIRFMQEIKELIKILKTRPNATCLSFLSASSFILAISSWFIKNRIVFSERNNP RKVPIGWHQQALRNFAFRFADALVFQTEDARSYFPKSVQNCGVIIPNPINGKLPPPIEGE REKTIVTACRLHPQKNLPMMINAFSMLADEFPEYKLVIYGQGVLEDELRAQIKSLNLENR ILLPGFASNILEKVAPCSMFVSSSDFEGISNSMLEALGMGLPVVVTDCPVGGARMVIKSG ENGILVPVGDTQAMYEAMRSVLKDPALAAKLSQNAIKVRDEFPLWKIAKRWLEVL >gi|292596546|gb|ADCV01000002.1| GENE 30 28626 - 29867 845 413 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0678 NR:ns ## KEGG: Vpar_0678 # Name: not_defined # Def: O-antigen polymerase # Organism: V.parvula # Pathway: not_defined # 1 413 1 413 413 697 97.0 0 MKLNITALADRMIWFITLIFLVLSLTISFALGEANYGAYVLFVCLFGLIIFYLIREQGVI KLRFNWMHAYMLIFIGACYLSAINATDVSVAMSRSFDMVKIFFMLIILYMCYQDKKSVDT LLKIGMWTGYIVCFYTVYFYGLDYFITVLSSSARIANDALNANTVGLLGANAIVMTLYYM LYDRPRWWHIIALPTLGILAATGSRKALVFVGVGTVLLFIFKSFRSANAVNSIVKVIGSL LGLTIIGIAVLQLPMFSEVLDRMSNMVEAFTGTGGDSSTIIRLALVDIGWDLFYQSPITG VGINNPSVYTFFVYGKDNYYLHNNYIELLAGTGVIGLLAYYSMYLYVAYNLIRYRDIHSN EYIMVLILFLSQIVMDMGMVSYESKSTYFYMMLFYLEVQLLRKGRKHEVQKIV >gi|292596546|gb|ADCV01000002.1| GENE 31 29845 - 30777 691 310 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0679 NR:ns ## KEGG: Vpar_0679 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 310 1 310 310 640 98.0 0 MKFRKLCNVGMSFLTKPYYRTRVLIKSGYYDSLSDEDFLKKVFPKYMGYPLDLENPKTFS EKLQWLKVNFRDPIQTVMVDKHEAKHFIAQRVGNQYIIPTISVWNSVDDIDLDRLPNQFV LKCTHDSGGIVICKDKSTLDWEAAKAKLRTFLKRDYSRIAREWPYKNVPRRIIGEEYLSE LGSNDILDYKMYCFHGEPKLTVVCSNRFSKTGTSMNFYDIDWNPMGIHFGHYPPLPTEFP KPDTYGEMQQVAMELSKGCPFLRVDFYEIKGHLFIGELTFFPGAGFERFRPMSKDYELGE WLHLENVHRG >gi|292596546|gb|ADCV01000002.1| GENE 32 30755 - 31894 964 379 aa, chain + ## HITS:1 COG:BS_ywtB KEGG:ns NR:ns ## COG: BS_ywtB COG2843 # Protein_GI_number: 16080641 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Bacillus subtilis # 35 238 92 299 380 77 28.0 5e-14 MRMYIGADLVPTDINKTLFENGNGEAFVGKELYEILKQSDLNVFNLEVPLTDIETPIVKF GNNLIAPTKTINGYKALEPLFLTLANNHSLDQGVEGLTTTLNLLKQHKIAHAGAGANLKE AKKPFIFEKDDIRIGFYLCTENEFTMATCHTMGANPFDVLESFDEVKVLKAQCDYVIVLY HGGKEFYRYPSPMLQKYCHKFVDSGANLVICQHNHCVGSREDYQGGTIIYGQGNFIFNSD FYVNHQEFVKDAILVTIDVTKDDFVVSELPIRRTDNGTRLATEVEATETLEAYRKRSEEI KDPHFVTQAYKAFADTHVKRYLREFLGRSFIVRAINALLGRKLVELILGKTSYLAIQNYL ECEAHHELFLRGIKNINKK >gi|292596546|gb|ADCV01000002.1| GENE 33 31894 - 33348 909 484 aa, chain + ## HITS:1 COG:SMb20950 KEGG:ns NR:ns ## COG: SMb20950 COG2244 # Protein_GI_number: 16264822 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Sinorhizobium meliloti # 11 437 16 466 494 94 22.0 4e-19 MDTKIVAAAKWSVITEVLAKLITPLTNIILAHMLAPTAFGILATIMMVISFAEMFADAGF QKFLVQHEFESTQDKQEATDVAFIANLVFSLVLWGAIIIGRDELAVLVGNDGLGIPLAVM GAMIPLSAFSSVQMALYRRDFNFKFLLNIRLITILTPILISIPMALMGHDYWSLIAGMLG AQLFTALALLKSRKNQIHLFFSSRVFMNMFNYSAWSLAEAFSIWLTAWVDTFIISRFLDA YYLGIYKMPMAIVTTVMAMATASLAPVLFAALSRVQNNQQAFSNTFFTFQRYMALFLVPL GVGLFVFQDFVVQLLLGPQWTLAGIVLGSWALSSAIMTVTANLISEIFRAKGMPNLSFWT QILHLVVLIPVIYICIQYDFSTFVYARSLVRMEMLAASMLLLALFVNMSAFRIISNISVY LITASIVGLIAYSILHLYDAVWWTVVCMLLCVVLYVAILYVIPSERIIIASGYKKVLSKV KRHN >gi|292596546|gb|ADCV01000002.1| GENE 34 33371 - 34468 1200 365 aa, chain + ## HITS:1 COG:BH3709 KEGG:ns NR:ns ## COG: BH3709 COG0451 # Protein_GI_number: 15616271 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Bacillus halodurans # 13 364 3 337 343 346 50.0 4e-95 MLSKNVDLNNTVILVTGAAGFVGANLVMSLLSEAEGTQIIGIDSVNDYYDVALKEYRLQQ IDELSKDNKNIWIFKKGNIADKSFVDEIFAIYKPRVVVNLAAQAGVRYSITNPDAYIESN IIGFYNILEACRHSYDDGERGVEHLVYASSSSVYGANKQIPYSTDDKVDNPVSLYAATKK SNELLAYSYAKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTNTLRNGGTIKIFNYGNCKRD FTYIDDIVEGVSKVMSTAPERRNGADGLPVPPYAIYNIGNSNPENLLDFVRILSEELVSS GVLSEDYNFEEHKELVPMQPGDVPVTYADTSALEADFGFKPNTTLREGLKRFAIWYKDFY MMESK >gi|292596546|gb|ADCV01000002.1| GENE 35 34469 - 35635 1520 388 aa, chain + ## HITS:1 COG:ugd KEGG:ns NR:ns ## COG: ugd COG1004 # Protein_GI_number: 16129969 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli K12 # 1 388 1 388 388 545 68.0 1e-155 MKIAIAGTGYVGLSNGVLLAQHNEVVALDIIPEKVDMLNRKEAPIVDAELQEYLATKELN FKATLDPVEAFTGAEYVIISTPTNYDPQKNFFDTSSVEQVIKAVLEINPDAVMIIKSTVP VGYTVQMREALKTENLIFSPEFLREGKALYDNLYPSRIVVGEDSERAHRFGQLLADGAIK ENVPQLYTDPTEAEAIKLFANTYLALRVAYFNELDSYAEVRGLSTSQIIKGVCLDPRIGD FYNNPSFGYGGYCLPKDTKQLLANYNDVPQNLISAIVDANRTRKDHVADTIIAKNPKIVG IYRLTMKMNSDNFRASAIQGVMKRIKAKGIAVVVYEPTLDAEDFFNSPVIRNFEDFKRVS DVIVANRWDNSLEGVKDKVYTRDIFDRD >gi|292596546|gb|ADCV01000002.1| GENE 36 35672 - 36106 239 144 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0684 NR:ns ## KEGG: Vpar_0684 # Name: not_defined # Def: VanZ family protein # Organism: V.parvula # Pathway: not_defined # 1 144 1 144 144 229 91.0 3e-59 MKRWILYIVLGLIVFFIWDNSLQNGGTSDGFSLIFAEWLAPIADKLGFYGNIWALNRIVR KLAHLTEFTILGGVLYVVLRRYIEYGTVVKTIGVGIVIACLDEFIQLFSLGRSSQVFDVL IDTIGIIIGILVVKLAYYISHDKR >gi|292596546|gb|ADCV01000002.1| GENE 37 36395 - 37198 916 267 aa, chain + ## HITS:1 COG:SA0146 KEGG:ns NR:ns ## COG: SA0146 COG4464 # Protein_GI_number: 15925855 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Staphylococcus aureus N315 # 4 201 1 197 254 70 25.0 2e-12 MSRVVDLHGCILPAVLGPQGPQTMAESVKMIKSLSKQGITDIFSTPDVTVSMDLNTWNAM KSLVNEVKVAIKEQLVDVTIHSGARVMLCDEMVEYIVFHRNQYTLGDSHFILVALPQNSK VHHINAWLLSLLDMGIVPIVSEVETYGQLFTKPEQLLEWVDKGILIQCNMASFNHGNANY DRAIELYRNGLIHFFGTGYSNGCDVKAYQGYVEAISKLDNTYKKDLLPNIHLNERDLLAN RTFYPSVPSSWVGKKGNFLTRLFGFAL >gi|292596546|gb|ADCV01000002.1| GENE 38 37443 - 39593 2355 716 aa, chain + ## HITS:1 COG:STM4452 KEGG:ns NR:ns ## COG: STM4452 COG1328 # Protein_GI_number: 16767698 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Salmonella typhimurium LT2 # 3 716 4 706 712 529 40.0 1e-150 MLQVIKRDGTKVPFDKNKIALAIEKAEHSSTGLYEEGLAQRIANEIEEYATKLQKDMTIY AIEDQVYYKLIEYHNPATARAYEGYKAVQAFKRRQNTTDDDVIGLLDRSNISVLDENSNK DAAIVSTQRDLIAGEVSKDIARRKLIPTDILEAHDSGAIHFHDMDYIIQPMFNCCLINLE DMLTNGTVINGKKIDTPKSFQVACTVTTQIIAQVASGQYGGQSINGIDRILAPFVRKSYE KILNNVIEEQVEIYGMEPNMEKAREIAWKRTRKEVKDGIQTIQYQINTLMTTNGQSPFVT LFMYFQPDYEYAKEAALITEEILRQRIKGVKNEADVYITPAFPKLIYVLDEHNVTPDSPY YYLTELAAQCTAKRMYPDYISAKKMKENYSGNVFSPMGCRSFLSPWKDENGEYKFDGRFN IGVVSLNLPQIGILARGSEERYFEILDKRLELAEKALMLRYELLKDVVSDVSPIHWQHGA IARLKKGEKIAKFLTGGYATISLGYIGIYEATRLITGESNTGEKGRVFAMKIMDRLNAAV DEWRVKHNMGFALYGTPAESLTHRFSSLDRARFGIIEDITDKGYYTNSYHVSVREEINVF DKFSFESEFQKKSTGGCISYAEIPNMTNNIPAVLTMIQYIYDHISYAEFNTKSDYCHECG FDGEIKVNEHNEWECPRCHNTNRDKLTVIRRTCGYLGENFWNEGRTKEIKDRVMHI >gi|292596546|gb|ADCV01000002.1| GENE 39 39837 - 40346 433 169 aa, chain + ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 5 165 1 165 168 164 44.0 7e-41 MEVMMRYGQIRQYDIANGEGIRTSIFVTGCTHCCYNCFNEEYQDFNAGKVWTQAETDLVV SYVKNPTCSGLTLLGGEPFQNVQGLLPVVRAVRAAAPEKKIWAYSGYEIDDILVDELRSA LLQEIDILVDGRFVDELKDPALRFRGSSNQRIIDVKKTLAAGEIVLAME >gi|292596546|gb|ADCV01000002.1| GENE 40 40349 - 41587 1150 412 aa, chain + ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 29 402 1 375 380 291 46.0 1e-78 MIYDKRFIGLIIIVGFIAGLVGASYTHLLHGIQHFVYNYSSADHLSFGAAVARVSPIERL IPLIVCGVIGGVGWVLIHRYGKGVVDIKTAVSGKMDMNPITTVLHATLQIITVGIGSPLG REVAPREASAGITTFLVKHFDIKQEDRQLLIACAAGAGLAAVYNSPLSAAIFTLETLLLT WNVRAMSAALLCCGLATFVTRQAGVGDVIQYTMAQPSLGSHYVEFSIALGAIIAIGVVLF NITQGKLPAIHRSSPVMIPISIVAFTLIGVLSMYFPEILGNGKAGNELTFTNDITWTYAL GLFGSKWVAVLLALAAGAYGGRITPSMMLGSTLAIVFGTVWSIAVAPISLGMAAFVGAVV FLGLAQKMPMTSCVFMLELSRFSVEMLFPIALTMGTALMVEQIIQSKLNSAK >gi|292596546|gb|ADCV01000002.1| GENE 41 41680 - 42228 547 182 aa, chain - ## HITS:1 COG:MJ0304 KEGG:ns NR:ns ## COG: MJ0304 COG0663 # Protein_GI_number: 15668479 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Methanococcus jannaschii # 17 159 8 151 159 144 48.0 7e-35 MLPFHGKYPKLDPKSCVMPGAELAGDVELKEYASIWQNCALRGDVNKIVVGRYSNVQDNS VLHVDDDKACILGDYVTIGHGAIVHASTIEDNVLVGMGAIVLSGCHIGSGSIIAAGAVIK ENTVIPPNSLVVGIPARIARTDDTQIERIHNQALKYKHLWTVEYGMLPDAGGEEYDKNAK IV >gi|292596546|gb|ADCV01000002.1| GENE 42 42250 - 43203 1314 317 aa, chain - ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 309 2 308 310 261 45.0 2e-69 MRTALTQLLQIEYPIIQGAMAWVSEHKLVAAVANAGATGVIALGGRDAEWTRNEIRACKN LTDKPFGVNLMLMAPNKDELVDIIIEEKPAFVTLGAGNPVPYIKPLQDAGIKVIPVVPSL KLAKRIEEAGADAIIIEGMEAGGHIGSQTTMSLMENILPEISIPVVVAGAIVDGRGIAAA LLMGAEGVQMGSRFLLAEECQAHINMKEAIIKATDTDSVVTGLLSGHGGVRSLKNEFTTR YLAAETDGVTTPEERTKMSQGTNKRAAIDGDVVNGAVQVGQGLNRLTTIEPAHTIVQTVM NEAIMSIRKAQRLIEIV >gi|292596546|gb|ADCV01000002.1| GENE 43 43750 - 43884 300 44 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0691 NR:ns ## KEGG: Vpar_0691 # Name: not_defined # Def: rubredoxin-type Fe(Cys)4 protein # Organism: V.parvula # Pathway: not_defined # 1 44 1 44 44 77 100.0 2e-13 MEKYVCVVCGWVYDEAVEGVKFEDQPADYVCPICGVGKDQFEKM >gi|292596546|gb|ADCV01000002.1| GENE 44 43985 - 44497 385 170 aa, chain + ## HITS:1 COG:CAC1744 KEGG:ns NR:ns ## COG: CAC1744 COG1399 # Protein_GI_number: 15895021 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Clostridium acetobutylicum # 40 162 14 137 140 80 33.0 1e-15 MKLQVEQAKEHIGKKFPYSYTISASELGDVTAFPWSRHDITISGEFWFDGQNYIVQGSIQ SKGNYDCSRCLNTTEHYRKDFFEEIFSDCRDAADDVNSFDGEEIDLTELIRDTLIINEPS QVLCQDDCKGLCVHCGANLNVSPCSCESFVVDPRFAELRALLDEKDDRLS >gi|292596546|gb|ADCV01000002.1| GENE 45 44523 - 44699 333 58 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371476|ref|ZP_03854960.1| LSU ribosomal protein L32P [Veillonella parvula DSM 2008] # 1 58 1 58 58 132 100 1e-29 MAVPKRRLSKCRRDRRRANWKLEAPGYVACPQCHEPKMPHRVCPTCGHYKGEQVVANA >gi|292596546|gb|ADCV01000002.1| GENE 46 45007 - 45567 560 186 aa, chain + ## HITS:1 COG:BH2494 KEGG:ns NR:ns ## COG: BH2494 COG2050 # Protein_GI_number: 15615057 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Bacillus halodurans # 5 179 4 179 186 109 39.0 2e-24 MSRLKKQERQKQLQEKLNITPFLTDEELATHFGVSVPTIRLDRLELGIPELRERIRVMAT GQSHEMVEHVSYEVVGELIDVTEGHQALSMLRTTADMEDQFGYVEPQYLYAQANSLAKAV MGTTVCSAEVGNIKYKNPVGSGTNLVAKAEIIRRRGNKFFIWVIIRDKIKEVFRAKFIME SVENRV >gi|292596546|gb|ADCV01000002.1| GENE 47 45571 - 46599 1148 342 aa, chain + ## HITS:1 COG:alr0238 KEGG:ns NR:ns ## COG: alr0238 COG0416 # Protein_GI_number: 17227734 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Nostoc sp. PCC 7120 # 1 332 6 335 341 272 45.0 9e-73 MKIAIDAMGGDFAPMETVLGSIEAVRANQHIEVVLVGDEQQIFDILEANNEAKNPRISVH HASQVIGMDEHPGQALRKKKDASVVVATSLVRDNRCDAVIAPGSTGAAVAAALFGLGRIK GVDRPVIATPMPTVNGITVMLDSGANSNSKPKHLVQGALMGSEYAKLLLGKENPTVGLLN IGEEATKGNDVVLATYPILEGMKTINFKGNIEGRDIPKGAVDVVVCDGFVGNVVLKFAEG LVTGLTQLVKDSIMAGSIFAKIGAMLVKPALKKMAKRLDHTENGGAPLLGVNGVFMIAHG SSKAKEIKTAIEIASDLVERKIIQHIRETMDIEGALKYDYDE >gi|292596546|gb|ADCV01000002.1| GENE 48 46583 - 47578 1080 331 aa, chain + ## HITS:1 COG:FN0148 KEGG:ns NR:ns ## COG: FN0148 COG0332 # Protein_GI_number: 19703493 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Fusobacterium nucleatum # 6 330 2 326 328 345 51.0 9e-95 MTMMNKPVGIIGTGSFLPDNVVTNFDLEKMVDTNDQWIRERTGIEERRIAPEGMNTSYMA TEAAKKAMQMANVSAEDIDMIIFATLTPDMIIPSAACVLQANLGAKNAAAYDLQAACSGF VYGLITAASYISSGIYKKVLVVGAEILSRRVNWNDRGTCILFGDGAGAAVVSEVPEGYGI KGIDMGADGTGGSALCIPAGGTAVVANDQRVEEGLTFIHMDGPEVYKFAVKTMGRTVLKS LERADMELNELDYFIPHQANIRIIDSAAKRLHLPMEKVFVNLHKYGNTSAASVAIALDEA NREGRFKRGDNVAFAGFGAGLTWASLVLKWY >gi|292596546|gb|ADCV01000002.1| GENE 49 47594 - 48538 1303 314 aa, chain + ## HITS:1 COG:CAC3576 KEGG:ns NR:ns ## COG: CAC3576 COG2070 # Protein_GI_number: 15896810 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 310 1 310 310 342 58.0 7e-94 MIKTDICDLLQIEYPIFQGGMAWLGTAELAAAVSEAGGLGIIGAGHMPPDIFRNEIHKLK ERTSKPFGCNIMLMSPFVKEVMEVVVEERVPVITTGAGNPGVYVPALKEIGTKVIPVVAS VLLAKRLLRGGIDAIIAEGTESGGHVGDITTMALIPQVVDAVDVPVIAAGGIADGRGMAA AFALGAKAVQMGTRFVLSEECIAHENYKNAVLKAKDRATVMTGLTTGHPVRIIDNALAHK YKSLEFSGGSKEELEALGAGTLRLAAIEGNVKEGSVMIGQISGMLTDVKPCETIIKDIMT EAETVIKNLQGLSK >gi|292596546|gb|ADCV01000002.1| GENE 50 48550 - 49491 1309 313 aa, chain + ## HITS:1 COG:BS_fabD KEGG:ns NR:ns ## COG: BS_fabD COG0331 # Protein_GI_number: 16078653 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Bacillus subtilis # 2 310 3 311 317 306 52.0 4e-83 MKTAFVFPGQGSQKVGMLQDLYNAYPIVKQRFEEADEALGYSISKLCFEGPDTELVKTAN TQPAILTASVACYEILKEQGFTPDIVGGHSLGEYSALVAAGVLNFKDAVYVVHKRGEYMQ EAVPLGKGAMAAILALPREQVVEICEEVNASVGSVQAVNFNCPGQIVIAGETAAVETAAE KMKEAGAKRAVMLPVSAPFHSRLMEPAALRLKEELDKIQVCDAQIPVVANVTGKILTNAN DIKESLVTQAANPVLWEDCVTEMVNFGVTRFVEVGPGKVLTGFTKKINKDMELANVEDIA SLEKTLEFLKGVR >gi|292596546|gb|ADCV01000002.1| GENE 51 49493 - 50236 207 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 243 4 238 242 84 28 5e-15 MHLEGKVAIVTGASRGIGRAVAINLAQSGADIVVNYSGSEGAAQETVEAVQALGRKAIKF KANVANADEVASMVEEAHKEFGHIDILVNNAGITRDGLLMRMKDEDFDAVIDINLKGVYL VTKAVSKIMMKQRSGHIINMTSVVGVIGNAGQTNYAASKAGVIGFTKSCAKELASRGITV NAIAPGFINTDMTDVLPEKVKEAMVTQIPLGRMADAEEVATVATFLASDFANYITGQVIN VDGGMVM >gi|292596546|gb|ADCV01000002.1| GENE 52 50288 - 50518 422 76 aa, chain + ## HITS:1 COG:DR1942 KEGG:ns NR:ns ## COG: DR1942 COG0236 # Protein_GI_number: 15806940 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Deinococcus radiodurans # 1 74 35 108 110 81 56.0 4e-16 MNTFDKVKAIVVEQLGVDEAEVTIDSTFIDDLGADSLDIVELIMAFEEEFNVEIPDDVAE KIKTVKDTVEYIDSAK >gi|292596546|gb|ADCV01000002.1| GENE 53 50596 - 51552 1114 318 aa, chain + ## HITS:1 COG:CAC3580 KEGG:ns NR:ns ## COG: CAC3580 COG2070 # Protein_GI_number: 15896814 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Clostridium acetobutylicum # 1 310 1 347 355 217 39.0 3e-56 MKLPELRIGNLVAKVPIIQGGMAIRLSTARLAAAVANEGGIGLIAASGLPFDELRYEIQL ARKLSPTGIIGINAMVAATQFAGLVKTAIEEGIDLVVAGAGFSRDMFAMGKESGTPIVPI VSSAKLARISEGLGAAAVIVEGCEAGGHLGTDRSAREIVPEVVAAVKNIPVIAAGGVLDG HDIVEMLKIGASGVQMGSRFAASDECNASDELKKMYVRATNPEDIVLIQSPVGLPGQAIK NKFAESVLDGTVAPPTVCDNCLKHCSHKFCIIRALSRAQQGDVETGLVFSGNNMRKVDRI MPVKDIFAQLKQQVAEID >gi|292596546|gb|ADCV01000002.1| GENE 54 51588 - 52832 1740 414 aa, chain + ## HITS:1 COG:sll1069 KEGG:ns NR:ns ## COG: sll1069 COG0304 # Protein_GI_number: 16329903 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Synechocystis # 2 413 6 416 416 462 57.0 1e-130 MEKRVVITGLGAVTPVGIGKENFYNALLAGQSGIGPITRFDASDYATRIAGEVKDFDITN YGVDKKEARRMDRSVEFAIGAAVLACEDADLDLDKADLDRCGTVVGTGIGGIDSIHEVYE TLFEKGPGRVSPFAVPMMIANMTSARVSIRLGLKGPVITDVTACTSGTNAIGDAFRIIQR GDADVMFAGGTEAAVSPAAVAGFAAMKAMSTRNDEPTKASRPFDRDRDGFVMGEGAGIVV LEELEHAKARGAHIYAEVVGYGSNGDAYHITAPAPGGVQARKCMELAIKDAGIDPKDVNY INAHGTSTGLNDQNETLAIKELFGDHAKNIAVNSTKSMTGHLLGAAGAIETIVMAMAIET GKVHPTINCDNPDEGLDLDYVREGARELQVKCALSNSFGFGGHNGTLCIRRYEA >gi|292596546|gb|ADCV01000002.1| GENE 55 52832 - 53572 842 246 aa, chain + ## HITS:1 COG:SPy0531 KEGG:ns NR:ns ## COG: SPy0531 COG0571 # Protein_GI_number: 15674631 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Streptococcus pyogenes M1 GAS # 17 242 2 227 230 191 45.0 8e-49 MVTIETHKSKITQAREESLHELVARLDIPVSDISIIDCAFTHTSYANEHKSKHIHHNQRL EFLGDAVLDLIIGEYLFKTYPDMAEGNLTKIKAATVCEDSLASVSRSLQLGQYLLLGHGE RASGGNDRNSILADTFESLIGAIYISTDYQTAMAFVLKHLTTYIMQALEGKRGKDYKTLL QEYVQRDGDKHIVYHLLSESGPDHAKTFHMEVEINGVTYEAGSGKSKKIAEQHAAQLTLE KLMADK >gi|292596546|gb|ADCV01000002.1| GENE 56 53743 - 54942 924 399 aa, chain + ## HITS:1 COG:CAC1749 KEGG:ns NR:ns ## COG: CAC1749 COG1243 # Protein_GI_number: 15895026 # Func_class: K Transcription; B Chromatin structure and dynamics # Function: Histone acetyltransferase # Organism: Clostridium acetobutylicum # 6 279 7 283 358 215 40.0 1e-55 MKPFGMIPFFIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWE VAFYGGSFTAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTRPDAVGDEAITLLQSYGVKTV ELGVQSMNDGILVDAKRGHTAQEVVEAVTRLKHRDMTVGVQLLPGLKGETWQTIIETAIA VAALRPDFVRIYPVLVIENTELAEQYRAGEYKPLSTELAIQYCSFLKDWFEQHGIEVIRT GLQSTEELDSRNSLVAGPYEPAMGELVVNEQYKQRIERCIDEHASQYTYALSNDCFNLTD YATYEKLGFSGVSAYNADNSGYIDNTNNDRTNYIRNNGIAVQHNIVISYPRCLTSKVRGL NNRNVKYFQIQYPQYAFEWCEERTRNTVRCCIDGLQYVL >gi|292596546|gb|ADCV01000002.1| GENE 57 54988 - 58542 3923 1184 aa, chain + ## HITS:1 COG:BH2487 KEGG:ns NR:ns ## COG: BH2487 COG1196 # Protein_GI_number: 15615050 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Bacillus halodurans # 1 1181 1 1184 1188 522 33.0 1e-147 MQLLRLELKGFKSFADKTIVKFSPGMTAVIGPNGSGKSNITDAMKWVLGESNVRNLRGQK AEDIIFSGTEKRKPMSAAEVTLVFDNSDQQLDIDMAEVAITRRIYRTGESEFLINKRSCR LKDIHLLLADTGLGRDSMAIIGQNRIDAILNSKPEERRLIFEDVAGISRFKINKEDALRR IASTDRNMERVRDVMATIEEQLGPLSEKAEKTKKYMTLSRAKRDYDGALGFHNYKTSDRL LTRFENDNIAFKDEEIELQTELSKLEARRHELQSSSSKEQEQLKLWEAQYTEKQRDEERL SGHLRLLEEQLKTARRELDETSMRISELEATQKGEEQQLRILNQLIQDESAQLVEKESNL EELEASYKKAVEDVRSEQAKFQSLQSNREAFEKRQLEVVSAIETAKASIRSLEARKGESK NQCAILESEIAQVDSELQVARSEFEALGQKFNALSAQRQALVDDAKDAIMKAREERKELQ KLRTQEQRAKGRLELLAQWEEQHEGYLEGTKNILNGKGSWREQITGAVGDLFTVEEKYTT AIETALGGSVNHVVTTTARAAAEGVNYLKSIQGGRVTFLPMDSVKGKPYDTPALHESCVL GTAVDCISFDNKYAHIFQYLLGRTLVVSSMDDAIGLQKKYNQQLRIVTLTGEQFQPGGSL TGGATKRKRASVLSRKEEAASLEQELVQIEEQIRSLIANLESLEKRVEETEKDQATLDES YQHTNLLYVASETKVQNIQNQLDRKKRVLHEEEQRLVQIDIDLATTTANLKDQETALASL QEDHGMDGNQGALMGRLTVLQKVQQEAYEAFTEARLTCDTLRHTIQERESQREQRNQSIS SIIERLTPLRNLLVSTTQRYEEDIPLAQEVAEQELTSATAEVERLRALRDEAYDKTSTGR EEMESILSEQDRLNQRYKVVQGRLVDMEGKITRHRMDCERFVEELQELGFTLEDAQVLRI EGSVSDWKDEQARLIAEIAELGPVNPNAVEEYEETKERYDFLTTQLADLDTAKAQLQAVI AEMDKAMSTQLYDVLDVVGRRFQEVFSQLFGGGTAQIVLTDPDNILTGGIDFYIQPPGKK RQQLTLLSGGERALTVIALLFSFLDYRPAPFCVLDEVDAALDEANVERFSSYLNRINKET QFIVVSHRKKTMEAAEVLQGVTMVERGVSRLLTVAFEDVKEDLA >gi|292596546|gb|ADCV01000002.1| GENE 58 58542 - 59477 794 311 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 7 302 20 320 336 310 50 4e-83 MAFGFFDRIKDGLEKTRKSFVKNVESIVIGYAQIDDDFLDDLEAVMLTSDLGPKTTEYLM KEIRRGVTEGIINHTGDVMPFMEDRITEMLIDQEDEITLHHPEVILVVGVNGVGKTTTIA KLANYYTKEGKKVIIAAGDTFRAAAADQLSIWADRVGVPIVKHKEGADPAAVVYDAMEAA KARNADLVIVDTAGRLHTKVNLMEELKKMGRVANNHVEGAPHQTLLVLDGTTGQNAVSQA KLFGQAVPVNGIVVTKLDGTAKGGVVISIKEELGVPVRWIGVGEGMDDLRPFNAKEFANA LFNKGMIQGDK >gi|292596546|gb|ADCV01000002.1| GENE 59 59467 - 59850 438 127 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0707 NR:ns ## KEGG: Vpar_0707 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 127 1 127 127 206 100.0 2e-52 MTNKYNREFLLEYVESENKKNECNVSLENMNKIVSLIEYFGIELYRPITRLLLSNWEEIT ERINNYTESDWMMADEIQKTTPTLDRFSIAMLIEVLEGEDTLNQAENVGRRLTDEEMKAI RKHQDEQ >gi|292596546|gb|ADCV01000002.1| GENE 60 59850 - 62027 2296 725 aa, chain + ## HITS:1 COG:BH3595 KEGG:ns NR:ns ## COG: BH3595 COG0556 # Protein_GI_number: 15616157 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Bacillus halodurans # 12 695 3 659 660 866 64.0 0 MKHSTYNYEGGQPFKVEAPFTPTGDQPTAIQSLTEGIERGEWAQVLLGATGTGKTFTMAK VIEAVQKPTLIIAHNKTLAAQLCSEFKSFFPNNAVEYFVSYYDFYQPEAYIPSSDTYIEK DASINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSDLVLSLRLGQTKSRDE ILSKLVDIQYTRNDMNFIRGTFRVQGDTIDIFPAAYSERAIRVELFGDEIDRLVEVDSLT GEVIAERKHVAVYPASHYVTTKEKMNIAVERIEAELDEQLAKLKAADRLLEAQRLEQRTR YDIEMMQEMGYCSGIENYSRHMSERKAGEAPFTLIDYFPDDFLIMVDESHVTMPQIRAMY NGDRARKESLIEYGFRLPSALDNRPLQFDEFVERINQIVYVSATPGPYEMEVETNIAEQI IRPTGLLDPSIEIRPIKGQMDDLLGEIHKRAAKNERVLVTTLTKKMAEDLTEFLKEMGVR VRYLHSDIVTIERAEIIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSD TAMIQTIGRAARNVNGHVIMYADRVTGSMQRAIDETDRRRAVQEAYNIEHNITPKSVSKD VKELIELTKIEEDMVTEGKGLSPKKGKQKKSSEGMDHGHESYVQDTSAPKVADITPEELY NKIEELDRQMKAAAKQLEFESAAKLRDQLGVLRQQWSDMHSAGDSKLKKPASTKSRKRTS PKSKS >gi|292596546|gb|ADCV01000002.1| GENE 61 62162 - 65014 3722 950 aa, chain + ## HITS:1 COG:BH3594 KEGG:ns NR:ns ## COG: BH3594 COG0178 # Protein_GI_number: 15616156 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 3 945 4 947 957 1288 65.0 0 MKDQLIVKGARQHNLKNIDISLPRDQFIVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSA YARQFLGQMDKPDVDYIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHAH CPECGKPITQQTIQQMTDDVMSFAEGTKVLVLAPMIQGKKGEHKSVFEQLRKEGFVRARV DGVVRTLDEEIVLEKNKKHSIDIVVDRLVVKEGIESRLADSMETASKWAEGIVVIQEVDG PEHMYSQHFACPDCHISLPKIEPRMFSFNSPFGACPSCLGIGSTMEVDEERVIPDGSISF ADGCVQALSSNPNAWFMRQVEGLLKANGYSLDSTYDELPKALQKKVMYGTTDKVNFTYEN MRGEIKEFFTEYEGILPMVKRRHSEASTDSMREEFEKFMSIKPCTTCHGARLKPEVLAIT VGDKNINEVTQLTIKEALDFFGNLQLTEREQVIGAQILKKINARLGFLNNVGLDYLTMNR SAGTLSGGEAQRIRLATQIGSGLVGVLYILDEPSIGLHQRDNDRLIDTLKGLRDLGNTLL VVEHDEDTMRAADYLVDIGPGAGEHGGQIIAAGSVEEVMKVKDSITGQYLSGRKFIALPE ERRKPGKNCIEIRGAKENNLQNVNVKFPIGLFNVVTGVSGSGKSTLINEILYKGLANQLY RSNHKVGAHKEIRGLEHIDKIINIDQSPIGRTPRSNPATYTGVFDAIRELYSQTPEAKMR GYKQGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGARYNRETLEVKYKGKS IADVLDMTVDDAVEFFSAIPKINRKMVTLQEVGLGYIRLGQAATTLSGGEAQRVKLATEL ARRSTGKTLYILDEPTTGLHAEDIRKLLHVLQQLVEGGDTVVVIEHNLDVIKMADHIIDL GPEGGNRGGTIVAIGTPEEIVKVKESYTGKFLGPVLEQTKKFMKAAKHKK >gi|292596546|gb|ADCV01000002.1| GENE 62 65149 - 66975 1647 608 aa, chain + ## HITS:1 COG:CAC0508 KEGG:ns NR:ns ## COG: CAC0508 COG0322 # Protein_GI_number: 15893799 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 9 602 7 623 623 454 39.0 1e-127 MPSEELLEKVSHLPTTPGVYLWRDQYNRIIYVGKAINLRNRVRSYVRNDANRAPKVTAMM KRAVDVEVIQTKTEMEALILENTLIKEHEPKYNIRLRDDKTYPYVKISVQEDYPRVYMTR RLERDGAKYFGPFTDVTSVHVVLKLIRQYYPLRTCKSMKVERPCLQYHMHYCEAPCFNKI SVPDYRKYIDEIIELFEGKPIPLLKEIKSKMEAAAEDLRFEDAARYRDQLSSIEKIQEKQ RMVTQRGDLDVLGLAVDTSMACVQLLFIRGGRLLGRENYFVQHDGDSSETIMTDFIKQYY GDTNFIPKELLLPMESTDRDLLTEWFTQLKGQHVDVSVPQRGYKMDMIKMAHENAETFLE ERRRQWQHQIDKTGGAVKKLAEILDLPRLPERMECFDISHTQGTETVASMVVFEGGKPAK KEYRRFKLKTTQGKPDDFKSMAEIMERRYGNETDWPMPDLIIIDGGKGQLNAALPLIRAV GVTDVPVISLAKRIEEVFVEGQSESIILSHHTPELQLLQQIRDEAHRFAITYHRKLRGKR NLESILDHIEGIGPKRRKALWAHFNSLEAMKEASIDELANVESMNYKTAETLYNFFRMSK VEKQEALK >gi|292596546|gb|ADCV01000002.1| GENE 63 67119 - 68477 1225 452 aa, chain - ## HITS:1 COG:BH0860 KEGG:ns NR:ns ## COG: BH0860 COG0534 # Protein_GI_number: 15613423 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 1 443 1 443 458 304 39.0 3e-82 MYQTYSILQKLWLFIKLFTPMCITQFSLIGATFIAIFLTGQYSTTDLAGVATGYNLWLLF YIFAQGTLMGITPIISQLLGAKKTDDIPIIFHQGLFIGTGLAFLILLIGIFGLRPLLTYL NLEPAATEVCISYLKAFALGLFPLLWVNTLRNTVDSHGLTHYSMAIVFTSFVINVFLNYA LIFGHYGFPEIGGVGAGYGIAGACWTNLVLFSLVILLHPKLKGYRIYKDFHSPNFHYIRE QLQVGIPIGFSIFFEASIFSIAGLLMVHFGSAVVAAHQSVISFTNVFYCLPLSIAMSSTI AVAYELGAGRKIEAIQYSYISRVLAIIIAVLICAFTFTHMDNIADLFTNDDEVYELIYQF LGYGVFFAAIDAIGTPLQGILRAYKDVKIVLYISLVSYWGVCFPTAYTLAKNPNYGPFGV WIGLLASVVVAGILFTLRTYYIQHYKPRTIAK >gi|292596546|gb|ADCV01000002.1| GENE 64 68749 - 69408 847 219 aa, chain + ## HITS:1 COG:PA1170 KEGG:ns NR:ns ## COG: PA1170 COG0861 # Protein_GI_number: 15596367 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Pseudomonas aeruginosa # 11 196 13 198 244 147 45.0 1e-35 MDILTVQGLLAMLQIIVIDILLAGDNAIVIGMAARNLPAHLQKKAIFWGTAGAIILRLVM AFLFVEALNNIPALRLVGGILLLWIGYKLVVDDDSEHNIEAKDNLRAAIMTIVIADGIMG IDNVIGVVGAASGNMTLVAVGMLITVPIIIYGSTLFVKVIERLPIILYVGGGILAWVGAA MSVEDKLISHTVEPYALLIKIGAVILVVGASLLVKKLKK >gi|292596546|gb|ADCV01000002.1| GENE 65 69609 - 70277 756 222 aa, chain + ## HITS:1 COG:PA1170 KEGG:ns NR:ns ## COG: PA1170 COG0861 # Protein_GI_number: 15596367 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Pseudomonas aeruginosa # 9 209 11 219 244 129 42.0 3e-30 MEFLEAATWITISKIILIDILLAGDNAVVIGMAAGKLAPELQKKAVIWGTVGAIGMRLVF ATLLVEALTLIPLIHLGGGLVLLWIAIQLLKGGDEDAHIEAKNSLMGAIWTIIVADAMMS IDNVIGVVGAAKGHLELVIVGMLITVPIIVFCSTLFARIINKFPVILWAGGALLGWVAGE MIVEDPLLVPHIQGEELLVKFGTVFFVLIVTGMIKIWKKRDS >gi|292596546|gb|ADCV01000002.1| GENE 66 70277 - 71797 1556 506 aa, chain + ## HITS:1 COG:BH0687 KEGG:ns NR:ns ## COG: BH0687 COG2265 # Protein_GI_number: 15613250 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus halodurans # 45 500 3 456 458 462 49.0 1e-130 MNGTSRTSRKNKSKFKQQNKNRSNGKQNSNHYNGQQNTNTSVSKKQQAMLNAPVKLGDEV LVTIHGIGSSGEGVGRVEDFTVFVPFALPGETVKVSITMVKKTYATGRLLKIVTMAPNRI DASCDLYGFCGGCQLQHITYEGQLSLKTQKVKDVIERIGHQNPELVKPALGPKDPWAYRN KMQMPVGGTKGDILMGFYAMGSHDIVQGTNCPIQDEGNNIIAQACYQIAKELDVEPYDEH TGKGVLRHIIGRIGQSGWMVILVTATDNLPHQEKWVKNLTERVPQVETIVHNVNGKRTNV ILGPKNRILYGDGTITDHIKDLRFTLSPHSFFQVNPEQTTVLYDQALKYANLKGEETVID AYCGTGTISLFLAHKAKHVIGIEIVEPAIINARENARRNGYDNTEFIVADAAVEMPKLYK AGVRPDVIVFDPIRAGCKKEVLTSAAGMEPKRIVYVSCNPATMARDIEILTHYGYELQEV QPVDMFPMTAHVEAVALLTMVSALNN >gi|292596546|gb|ADCV01000002.1| GENE 67 71877 - 73427 687 516 aa, chain + ## HITS:1 COG:no KEGG:CJJ81176_1513 NR:ns ## KEGG: CJJ81176_1513 # Name: not_defined # Def: hypothetical protein # Organism: C.jejuni_81-176 # Pathway: not_defined # 64 504 8 436 444 242 40.0 3e-62 MNAETFFKINELSKQLALTNEQLQEYLLLNGIDLYNNMDVDFSDKKFIKLIDNLKAKNKY NHDNKSGLQFIRIEGLFNKYDYNLEFDKDIAIWISENGKGKTTILTIIVALLTADARILY EINFKRIIIFISNKEFIIDKEKITKSFPKNNKRMQSKILYLLRELQEFIPLRTIIKLRYD IRNNGIIDLSILDDARHKISSDKLIDLDKLDTIIYEIKDLQYGEFYDVLYKIKEELKEEV VFYPTYRRIEVGMEKVLSSRIGRISSSDLTTKYMDFGMRDVKKRISQLLTKMREDANSSY IELNANIISELLEDKISNYINNFGNIDVHKVDVVIKRIGEERIANIKKLKDFIQFKHKHR KNSNVEFLIYYLQKLVNIYNSQAAINEKLTKFVQVCSKYLVGKKIVYNEALLTVDVFDND GIKIDLDSLSSGEKQIVSIFSKVYLDVTMPCIFIIDEPEISLSIEWQKDFLKDIYNSDKI NLLIATTHSPFVFKNDYIDYVKELGTAKEFGDVTKR >gi|292596546|gb|ADCV01000002.1| GENE 68 73411 - 74322 231 303 aa, chain + ## HITS:1 COG:no KEGG:BC1262 NR:ns ## KEGG: BC1262 # Name: not_defined # Def: hypothetical protein # Organism: B.cereus # Pathway: not_defined # 5 299 19 330 332 108 31.0 2e-22 MSRKDEMYAESNCIEAIFLSYINSKSSNNISLFFEGKDDFKYYCPRISFINNKEYNLYIC DNKNNVIKVHKMIKNQSSSKSNDIKLFFVDKDYDDNSLIDTDIYITPTYSIENLYFTDIA IKNMLRGVIGLSNHLDDDNKDLNIVFNYVKKCREELIENIIYGNAYYSCQVRKSTDAGIE KPNLSAIKQYCDLITCKTLQDFENLIENHVKVSEEELNEECNRLRQNPLMLIRGKYIVEG MIKCINFIVDDSNKRNRCGDELLSKRRLVRLNITKNNFISEFSNYAITPTCLIKYINDRT LTR >gi|292596546|gb|ADCV01000002.1| GENE 69 74517 - 75248 458 243 aa, chain + ## HITS:1 COG:PM0699 KEGG:ns NR:ns ## COG: PM0699 COG3587 # Protein_GI_number: 15602564 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Pasteurella multocida # 3 241 798 1041 1043 169 39.0 5e-42 MKQIKSKEELETSGSFVKESASTYGSKNAVSTNVKYDLVGKLVDETGLTRKAIIQILQGI KSAVFNQFKDNPEEFIIKAASLINDEKATAIIEHITYDVLDEKYDTNVFTAPTIKGRLGT NAMKANKHLYDHIVYDSTNEKNFASELDINSDVAVYVKLFDGFYISTPVGRYNPDWAIAF YEGTVKHIYFVAETKGSMNSMQLRLLEESKLHCAREHFKAISKGDVVYDVVDSYKSLLDI VTK >gi|292596546|gb|ADCV01000002.1| GENE 70 75268 - 77061 869 597 aa, chain + ## HITS:1 COG:NMA2230 KEGG:ns NR:ns ## COG: NMA2230 COG1479 # Protein_GI_number: 15795099 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 5 560 4 558 571 357 40.0 3e-98 MPTTIEVNKQSVETLLGSGKAKPFVIPEYQRPYAWSDEQVETLFEDLWEFTASTGGTEND GSYFLGSIVSYENEDGEQEIIDGQQRITSLFLLLRAIYTRLTDTSELERTAEAKNFISKI EPAIWRTNKLTGVVDYTDILLTSRVMNNDGNEILREILKTGIAIESSKDNYSKNYRLFLS LLDKHSQENPLMVYQFIYALLNQAILLPITADTQDTALTIFSTLNDRGLPLSDADIFKAK IYNQLDIDSKKLFIERWKDLDEQATSSKESIQQLFYYYMFYLRALEKDTKTTTPGIRKYY ANQKFKRLYEVALLDNLFIILNLWKVINKNEEIEGEEWSKNIKIKQTLDTLRSYPNEFWK YPVVIYYICHRNNESFEEKFCTFLNKLVLELFTKYLILPTVNAVKTDILKLNAAIVKSDK PIFDFKEIDLALLEKHIQNPHRNLVRMLLKILAYQEQEILLPENWEIEHIFPQKWQDNYF TDVSDSTIKEKIEYIGNKVPFEKKLNIIAGNGYFGKKKKEYLASSIVITKRLGELENNEW NLDSIMTRNIRILDSIKNILSKWNSEYNYISKEFSENKQPSNEDLEKIEEYKKNGWI >gi|292596546|gb|ADCV01000002.1| GENE 71 77172 - 77816 287 214 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0731 NR:ns ## KEGG: Vpar_0731 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 212 1 212 212 389 88.0 1e-107 MESILDVHEIMHQLSMWRPIFHSEADFQFSLAWLIKKKYSECEIRLEFVPEFNPNLHLDI LVILNGKWIPIELKYTTNKCIKTINEEIYVLKEHGAKDQGCYNYLKDIMRIEEFRDKSNK FIEGYTIKITSEMSYLKPPTKVNCTYAEFSIEDGSIKTGCMNWATNTGKGTMRGMEAPIV LTGMYPINWKEYSKVDDTNSGTFMYLVNTISKKN >gi|292596546|gb|ADCV01000002.1| GENE 72 77826 - 78305 567 159 aa, chain + ## HITS:1 COG:CAC2475 KEGG:ns NR:ns ## COG: CAC2475 COG3467 # Protein_GI_number: 15895740 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Clostridium acetobutylicum # 1 154 1 151 154 79 33.0 2e-15 MFKPVRKKINEIDHSAAEALLQSNRRGILAMNGDNGYPYAIPINYFYDCDKKKIYFHGAK AGHKVDALKASDKVCFTVHGNERIDESESWAPYVQSVVVFGRCRLLEAGTESIERLKEFA MKYYPDETLADEQIARNGRATQMFEITIEHMSGKQVQEK >gi|292596546|gb|ADCV01000002.1| GENE 73 78412 - 79065 392 217 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0717 NR:ns ## KEGG: Vpar_0717 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 3 217 1 215 215 347 80.0 2e-94 MTLKPREVCEKAWQDIASHFPDFKVTGKGQKLKKISKNKDLTFEIYFQANRNNYACSVEF VPHIFIYSKDMKKANYHNGFVYGGELGSLLNRKAWHWWQLAGASYQYTVDEVSKLLEEHI IPIFDDFEDIESNIEKFIDGDIIEHNLLYYIYHFGGKAKAQQYFNKIIEKDKLRSKYIGF YNHLKDLPKESILLDEGEFYGADMVKFAFINGLEIDK >gi|292596546|gb|ADCV01000002.1| GENE 74 79172 - 79522 308 116 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0719 NR:ns ## KEGG: Vpar_0719 # Name: not_defined # Def: TonB-dependent receptor plug # Organism: V.parvula # Pathway: not_defined # 1 116 646 761 761 218 93.0 5e-56 MGRIKHKELPNTNTNEYTEVNYDIPKHIFHAGLEYTSGKWNALWDTQYVSRRQSVDDITG QYGSEDSYFISNIAMNYKFSKEATLQFGIQNVFNRIFFNDEATAGRTYSASMKFKF >gi|292596546|gb|ADCV01000002.1| GENE 75 79550 - 81457 1492 635 aa, chain - ## HITS:1 COG:PA1271 KEGG:ns NR:ns ## COG: PA1271 COG4206 # Protein_GI_number: 15596468 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Pseudomonas aeruginosa # 46 199 23 174 616 95 40.0 3e-19 MRKSKCKKKTSGCNQTITSKALLFSMILTAMSGQIVNAIDKNVTDEPVTLPTYNVTVTAT RTMEDIVKTPSSVSVVTAEDIEARRADTVADALQMLPGVYKSQKANGGLQIRGFDSTNTL VLLNGVPMNNTFNNSVDWEAIPVHSIERIELVRGPSSSLYGGRGVAGVISIQTKQAEPKQ SVKDIHWHGQVGYGSHGTLNNELGFDARVSDRVAVGMSFEQRRTDGYPGFFITGKAAKIK PNTKTVTPDNPVPQTKDGAYLLGSRGNKSYNNKSLSTYITMNLRDKEALTYSYLYTKNRY SYENPMSTITVNGKPVFSGNIKINDQKYVALRTSRYLGYDGLKEYHAHNLQYKNDKSKLQ VIFNVLDRKKDGFSSPNSPNTPNYNGPGDDSFYPGKTINLDVQKIWDRMGKHTLVAGLNW KKENFDQKRRELTNWRNHSSFDSTTYPGGLYEINKGATNNLALFIQDTYRPNNDWAIYTG LRIDRFKKYHGQHVTYDKVNKKYDTVNHGEGAYTELSPRLAIEHYLNDSLNVYASYGHSF NPPPLSQVYRYSDIVKANPNLDPERSDSFEIGLKKEWNTKTTLNVSGFYVKTKDKIKYVT YYDRNGDVDYKMYNNVDLETRRGVELEVRHKLSSK >gi|292596546|gb|ADCV01000002.1| GENE 76 81665 - 82081 286 138 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0720 NR:ns ## KEGG: Vpar_0720 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 133 1 133 137 219 84.0 2e-56 MAVSNLKATLICPIEIVWDTVTNLNDYSWRSDLKDVRIIDEHSFIEITKDGIETYFKITE CIKYQSWIFEIENKNIKGTWVGKFYAEGDKTILDFTENIVSKKSILKPFISLYLKRQQKI YFRDLKAKLNCEEFDAVR >gi|292596546|gb|ADCV01000002.1| GENE 77 82126 - 82761 201 211 aa, chain + ## HITS:1 COG:no KEGG:NT05HA_1479 NR:ns ## KEGG: NT05HA_1479 # Name: not_defined # Def: hypothetical protein # Organism: A.aphrophilus # Pathway: not_defined # 4 208 3 210 210 206 55.0 6e-52 MAEVRFENLRKLLKSMKENEWIIDTFWFKYKSENYVVILKVYNEKERKPSDYAKVKLEFI RGNNVKDSIHAYADFWEIYFNSRDEFAKFFNINRSDANRDLFIDFSKIFAKFIPVKKIEE KSDLLRRLEGSRCEGNNPDAIFCYDVKRNGSTNGHKNTRTIENSNKARTLRSFLYYKYRE DQNLSFYFSPNPSDEKSDEEIICQVAKRHGK >gi|292596546|gb|ADCV01000002.1| GENE 78 82982 - 84043 974 353 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0733 NR:ns ## KEGG: Vpar_0733 # Name: not_defined # Def: ankyrin # Organism: V.parvula # Pathway: not_defined # 1 353 1 353 353 619 82.0 1e-176 MIELKDLGTFESVPHIVTDIVTGNVSVLENELANGWNINKPIEIGEYSEHTPLELALVMC CLPSIQWLVEHGVDLNDEENPSFLLAVRYGNKEIIDYVVDHGANVHALNRVKVDAFQAAL YGKKYENLQIIHDLGHSVQKYGGKAFRNAITNSNYKVLDFFIHNGVDINYNKPDSVYPFK PTPLCVAARYVDLKMCKYLVEHGADVTITEKDGMRPYSIAIEKGDMKMAEYFKALEPAEF HDIQNKMDQLKPFKLPKALVNFLEGDTLYFELPDTDFISIEFFPLIDTIPFKLGRRNLLR LSKELGEYNDLQIVWDSKTKKISCYDIEHQELRELCKFDEFMADMSGQLKSLF >gi|292596546|gb|ADCV01000002.1| GENE 79 84072 - 84491 359 139 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0723 NR:ns ## KEGG: Vpar_0723 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 139 4 142 142 201 75.0 5e-51 MVDEFDKTYTDWSIDVGTYKYEGITLNEVEQNLYAIEDQEQDFVIVSPSNKILIDNKLYN FLQVCSDEDTDLLHTEISVTNNGEEGAIIYGKNEQGPQEVLQIIADFIAHHKVPALDSWE IVLDLRPKTESYVPDTEND >gi|292596546|gb|ADCV01000002.1| GENE 80 84484 - 84843 231 119 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0724 NR:ns ## KEGG: Vpar_0724 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 119 1 119 119 193 85.0 2e-48 MTNHVKYDEQLRQYTLYYEGIQFCWDEVPTDVNVEIAKLLAANYHKNIDIIAIFIYNEIR DWYGDVTIDEVKTRIGMPIIEPDRDAVTYCEQTFDDTHIFSFTFRDDEFKDLHYFAIDG >gi|292596546|gb|ADCV01000002.1| GENE 81 84891 - 85361 304 156 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0725 NR:ns ## KEGG: Vpar_0725 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 152 1 152 152 196 77.0 2e-49 MLYTPNNFLYKYIRYRFRRIQIQCNMVYDVTVEEEDEICRNLLKKRAKVLIPVGILYCLI FAVSFVWLLGTSDELNPLMQWEVNVIEYVKPILNTIDFKWYAYSLDLLRVAVMLAPIAII NVSPYIIFSYIVDTILIRRRVKDLIKEYATDEKPFG >gi|292596546|gb|ADCV01000002.1| GENE 82 85391 - 86899 1659 502 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0736 NR:ns ## KEGG: Vpar_0736 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 502 1 503 503 790 80.0 0 MSNLKDFDWFGFWNDCDYAFESYIGKPVTDKDIKDAEAELGYTLPAAYIELLKHHNGGVL HKNCFINNDGESVNLTGIYGIDRDKKYSLFGEFGNEFWTSKCKYPPIGVVIANTISGGHD MIFLDYRECGPTGEPKVVRVDQEGDYSITLLADNFGDFIKQLYISIEEITDEEFQALSDD EKVKLINEQADLDIKRTIELLTNIGIDNLSLMLLNTLGRIYNNNGRPKEAIELFDRFEEK YRDWSWYYRKGYAHASLGCGKSYEFEHVQQALQLIETAVKMTKEAHLEKELGWCCEVVKY LLFKIKPKEYKEDYPMIFEAVKSVFGKKDKTNTTESRDLEDVNECEEDNYPTYDEVHWTF NKHTYSREAFSKEYNENIKDYEDDESESDILEEPEILVTYEAWIESVNQLFSNERVTDEE LLEDDKEDGMWQVEIMAHLIADNGTYFAREELLFKLHNLMANKELGDHVFFEGIEYEGHE CEGYGLIDNEAGIPVFFIVCGS >gi|292596546|gb|ADCV01000002.1| GENE 83 86956 - 87978 833 340 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0738 NR:ns ## KEGG: Vpar_0738 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 340 1 340 340 566 82.0 1e-160 MALTVKDFESLSDVEKLEKIKDLNDTGNLKEIIDVLTGVGVENLSIPLLGELGRAYNNND NEKEAIKVLESIDKEHRDAVWYYRCAYAYGSIVLDNSEAYTSNNMQQMLTLVDKGIRLAI EESRDDIKSYCFEVIDMCYMGMDFEKCEADYPDLSTAYNEYVAEKQKKRRGVPRHRTITV EEIQATDDMWTINEPAYWTINIYGSYDDYIESAKDFTLEQRYLNAICWYFAEVNNGGHHQ FFYNSTGIVWEDALAGLRLFKMDILADNLQSVIDYFGGSVPFDRAERWTILQDWENEDEL FDFLDAKDDVVYEYDGIYEDTFVHAHPELFVFDGTYKVSE >gi|292596546|gb|ADCV01000002.1| GENE 84 88045 - 88530 470 161 aa, chain + ## HITS:1 COG:AGl2275 KEGG:ns NR:ns ## COG: AGl2275 COG3760 # Protein_GI_number: 15891247 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 23 153 28 159 169 79 32.0 2e-15 MLDKQGVYDCLRDHHIDFEITDHAPLFSMDDKPNVQLPYPEWDAKNLFIRDHKREHYYLI TVRGSKRVDLKQFRKDHKLKKISFGSEEELWDILKIKPGHVSPFCLLHDEDHKVHYYIDA DYENNLIGIHPNQNDATVWLQGKELVKLIEEHGTTIEYITI >gi|292596546|gb|ADCV01000002.1| GENE 85 88660 - 90000 897 446 aa, chain + ## HITS:1 COG:slr0309 KEGG:ns NR:ns ## COG: slr0309 COG1032 # Protein_GI_number: 16331878 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Synechocystis # 26 406 41 420 473 210 33.0 4e-54 MKVKLIQPRMLKRPMDTDLKIRMSPHLGLLTVANIIRHECEITIENENIREIDFNDVPDL VGIAVTVDVLPRAIEIAALYRKKGAKVIAGGIHITTAFDTVPKEAFDSLCIGFAENTWPQ IIEDAKHGRLQSQYVSAPLESGDDIASPAYDLIDKTDYLWYNVVSTSRGCPHKCDFCYNS SGTHQYINRNIEDVLRDIKRLGTKHIMFIDDNFIGNISWTKQFLERIKPLKLNWNAAVTM KIGQYPELMDLMKETGCQSLFIGFESISPQSLSSVHKMQNNREEFERLINELHKRGIMVN ASFVFGLDGDTPETFKNTLDWIISQKIDTITSHIVTPYPGTEFYKRMAAQNRIFDYDLSK YNTSHVVVTPLGMSKEELEKGYLWIYKELYSIKNIFRRMPKTIGTIPAYLTFNFFYRRFG QFTSKVCELLTYKRIGLFAEKLSRYM >gi|292596546|gb|ADCV01000002.1| GENE 86 90011 - 90778 963 255 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0740 NR:ns ## KEGG: Vpar_0740 # Name: not_defined # Def: antibiotic biosynthesis monooxygenase # Organism: V.parvula # Pathway: not_defined # 1 255 1 255 255 480 98.0 1e-134 MNKNLLKRIVLTSAIAVLGVSTSFAALVMERDQSVDTAPSVGMYRFEVPVELQGTYNSAG VVNLTASMEKEPNTLSMNVAHVKGNPSESYVVEIYKDLAAIETHRKSDHYQAFVNEVGSK LTNRKMYDVQSVLLFEKKDALSIVNDGKAVVTLTEFTVDSNEIDTVQRQYQLDMERAVRD DVGYKVGYVLRERNAKNRWYVIQIYSDQEALTKHLNSPGYRFMMSQIQGSLQGVTTKVLD GDILVNHGGQAFVRP >gi|292596546|gb|ADCV01000002.1| GENE 87 90887 - 91666 588 259 aa, chain + ## HITS:1 COG:SA0314 KEGG:ns NR:ns ## COG: SA0314 COG2110 # Protein_GI_number: 15926027 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Staphylococcus aureus N315 # 2 258 6 261 266 227 43.0 2e-59 MTQQERLHYLLEGLVAEYKEKYKEHIDIPVNEEEQFTLFRALCNIRPAGAMPAEWMKIQD EYLNTLAHEKGIVTINDMEEREPQIYLWQGDITRLAVKAIVNAANEQLLGCFLPNHKCID NAIHTFAGIELRMACARMTEYMDMPEKTGVARMTYGFNLPASHVIHTVGPIVYDTVTDLE KEQLSSCYRSCLELANAYSLNSIAFCCISTGEFRFPNELAAQIAIDTVRRYLKETNSKIQ VVFNVYKDIDYETYNKLLG >gi|292596546|gb|ADCV01000002.1| GENE 88 91638 - 92489 802 283 aa, chain + ## HITS:1 COG:SPy1215 KEGG:ns NR:ns ## COG: SPy1215 COG0846 # Protein_GI_number: 15675179 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Streptococcus pyogenes M1 GAS # 12 279 16 284 293 232 40.0 6e-61 MKPTTNYWDNIERVKDFLNTADAVLVGIGAGMSTAAGLTYSGERFHKYFDDFHKKYGITD MYSGGFYSFESMEEYWAWWSRHIFYNRYDILAGEPYIRLMELLQNKNYFVITTNVDHQMQ FAGVDKNRFYYMQGDYGLWQCSEPCHQKTYDNEEQVRRMVKEQKDMKIPTELIPHCPRCG ELMTMNLRVDGAFVQDEGWYAAQKRYASFIENYKDKKTVLLELGVGYNTPMIIKYPFMRM AHDNIDTLYVPVNIEKQSIPFDIQQNTVLFNKDIQKVLNDLLS >gi|292596546|gb|ADCV01000002.1| GENE 89 92507 - 93004 680 165 aa, chain + ## HITS:1 COG:L118481 KEGG:ns NR:ns ## COG: L118481 COG0350 # Protein_GI_number: 15672513 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Lactococcus lactis # 1 164 1 166 169 142 43.0 4e-34 MNYKYTYESPLGTMVMLGTLSYLTDLFFIDEAHAPSYDDAEYIEQLTGPFEVTIMWLNQY FNGKKPFITPPIQLEGTEFRKSVWSILQTIPYGETTTYGDIGKQIAQQQGKEKFSAQAVG GAVGHNPISIIVPCHRVIGSNGQLTGYAGGIERKKYMLDLESEHK >gi|292596546|gb|ADCV01000002.1| GENE 90 93177 - 93839 685 220 aa, chain - ## HITS:1 COG:Ta0750 KEGG:ns NR:ns ## COG: Ta0750 COG0179 # Protein_GI_number: 16081822 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Thermoplasma acidophilum # 15 218 114 313 315 197 50.0 1e-50 MNENKHFLIPNPKSIICIGLNYADHIAETSLPTHNFPEIFMKTSNALAGNHDTITIEDET FHYDYEGELVIIIGKSGKNIFPEHAKDHILGYTIGNDVSARSLQFRGSQWILGKSLDHFA PIGPTIVSPDDFDFESATITTTVNGEQRQHAKLEQMIFKPYDIIAFLSTYMTLQKGDIIF TGTPSGVVLGKNESKYSWLKPGDTVTVSISGIGTLENKFI >gi|292596546|gb|ADCV01000002.1| GENE 91 94127 - 95149 1390 340 aa, chain + ## HITS:1 COG:CAC1479 KEGG:ns NR:ns ## COG: CAC1479 COG0115 # Protein_GI_number: 15894758 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Clostridium acetobutylicum # 3 336 4 337 341 500 68.0 1e-141 MSKNIDWDNLGFGYVETDYRYLTTYKDGKWDEGGLITDANVVLNECAGVFQYAQTVFEGL KAYYTKDGHIVCFRPDLNAERLNQSCERLVMPTLPEGRFLEAVKEVVKANKDFVPPYGHG ASLYIRPYMMGTNSVIGVKPADEYQFRVFTTPVGPYFKGGAKPIKIRITDFDRAAPHGTG HIKAGLNYAMSLYAITDAHNKGYAENMYLDAATRTHVEETGGANFIFITKDGKLVTPKSD SILPSITRRSLMYVAEHYLDMTVEHRPVHKDELKDFAEIGLCGTAAVISPVGQIDTPEGT INVPAGMDDMGPITKKLYDTLLGIQHGEIEAPEGWVVKIC >gi|292596546|gb|ADCV01000002.1| GENE 92 95294 - 95686 550 130 aa, chain - ## HITS:1 COG:MA0038 KEGG:ns NR:ns ## COG: MA0038 COG5496 # Protein_GI_number: 20088937 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Methanosarcina acetivorans str.C2A # 30 130 40 142 143 88 49.0 4e-18 MVSAGQTATATVTVTESNIAKTMKSGSLDVFATPAMCALMEEAAQAAVQPYLEEGEGTVG IALSITHEAPTPLGATVTAKATVSAVEGRKITFDIEASDGVGIIGRGTHERFVINNEKFM AKVHSRANAN >gi|292596546|gb|ADCV01000002.1| GENE 93 95933 - 96670 729 245 aa, chain + ## HITS:1 COG:BS_yhjE KEGG:ns NR:ns ## COG: BS_yhjE COG0398 # Protein_GI_number: 16078112 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 42 242 4 203 207 81 27.0 1e-15 MSKRNLKPSGEGWVQLIAGIGFIVLLIIINIVDPTFYPTMWHLATSGSMEEVAEYIQSFG PMAMLVSMVLDIFVNAVGFLPSIFISTANGLVFGMWPGIIISWLAETIGVVISFYIMRYF LRDTADKLIAKSTVLMKVDDFSGKNGFVVMLFARSLPYFPSGVITALGAISKIKPRDYIL ANLIGKFPSTALEVAIGTDIVNFQENMGRLGIIVLVAGVVYFILWKVYKNYINKKNAEQE HDPNA >gi|292596546|gb|ADCV01000002.1| GENE 94 96822 - 98015 1473 397 aa, chain + ## HITS:1 COG:RSc0985 KEGG:ns NR:ns ## COG: RSc0985 COG1167 # Protein_GI_number: 17545704 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Ralstonia solanacearum # 31 392 43 395 406 214 33.0 2e-55 MSFSLPERVTLKGPNFIREVFERGVGVEGFISFGIGNPAPEAIPVEIIEKAFDEVVHSNP MSLLQYGPMQGDAHLAELTLERLVQTHKMNPEGQGLIISNGAGQLLGLVPITVLEPGDEV YMDEFTFTSAINSVRNMGGKAIGIKTDEYGMIPGELEKAAQSGKGKYIYLIPNFQNPTGI TMPLERRKEIYAIASKYDLFIYEDDPYGEIRFAGEYIPTFKSFDTEDRVLYAGSYSKTLS AGLRVGFLFGPTKVIEAIQALKNNTAGQMPLVTQKVVAKVLDTIDYDAHLDNVRKVYKMK CEALLNAFEKYASSKVHLTQPTGGMFAWMTMPEDVDCDVFFETCMDRNVGIIKCGAFAAD GAGEGHAFRLSYTVPTVEEITKGMEILGGLTKEFCGE >gi|292596546|gb|ADCV01000002.1| GENE 95 98135 - 98968 1053 277 aa, chain + ## HITS:1 COG:CAC2982 KEGG:ns NR:ns ## COG: CAC2982 COG0489 # Protein_GI_number: 15896234 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Clostridium acetobutylicum # 39 263 28 259 277 224 47.0 1e-58 MGCGSSSDCGGCPSQSSGCGGGASQQPQDLTAQLHELSSVKHVIGVVSGKGGVGKSSVTS LMAITMARKGYKVGILDADITGPSIPKMFGIKEKAYADEIGMYPVKSKGGIDVMSVNLLL ENDTDPVLWRGPILGNVVKQFYTDVIWKDIDYLFVDMPPGTGDVAITVYQSLKLDGIIIV TSPQDLVSMIVEKAVKMADLMQVPIIGVVENYSYFHCPDNGKDYQIFGESHIEEILQKYG LLLLNRLPIDPTIANLCDKGDIESIEKTNLEDVSLPE >gi|292596546|gb|ADCV01000002.1| GENE 96 99202 - 100602 1793 466 aa, chain + ## HITS:1 COG:CAC1590 KEGG:ns NR:ns ## COG: CAC1590 COG0471 # Protein_GI_number: 15894868 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Clostridium acetobutylicum # 5 466 15 476 476 420 49.0 1e-117 MKKLLNWIIPAAFCLGLWFVPTPEGLTPQSWHLFAIFVATIVGFITQPLPIGGVSIVVIT VAALTGTLKISEGISGFANSAIWLIVGAFLFSRGFIKTGLGKRIAYNLISAFGSSSLRLA YALALSDLILAPATPSNTARVGGVIMPITTSLAKAFGSEPQDGPRKIGSFLMQSIYQVNT ITSAMFQTSMAGNTLVAALALQSFGIGITWGDWAMAAIVPGIIALIIMPYFIYKVYPPEI KDAREAQQMIREELKGLGKMSFQEWVMLGVFILALVLWATSQFTKLDATTVAFLGISILL ATGVLIWDDVKSEKGAWDTLVWMGTLMGFAGFLSKLGFIKWATVQVGGYIPEGSWVIAFV VAVLVNTYAHYVFASLTAHISAMFVAFSAIAISAGAPPMLTLLMIAFTSNLCMSLTHYAA GPSPVIFNTGYVPQNIWWKLGFFTSVINLIIFMGLGSVWMKLIGMW >gi|292596546|gb|ADCV01000002.1| GENE 97 100836 - 102185 1405 449 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 6 445 9 430 433 310 37.0 4e-84 MKFDNEQLLKYIGACTSPYHTVDTSLQMLLDSGFTELSLEDEWQLDSGSYVVNVFGTTLF AFHIGKKPEHTLRIASAHTDFPAIRVKPNPITSMKGYTKLNVEMYGGLIENTWLDRPLGA AGTVVLKGKNAFDVDSVLVDTKRPIAIVPNLAIHMNRSVNDGIKLNRQKEMLPILMMERS NEDNPTKPLNNRNNPSLFPESDTQYDEWTKFLADEVDCDPSEILSYEMTLYPTELGCVLG TESDFISSPRLDNLTSCFGVLSGIIQARKMNANGVRCAIFFDNEEVGSRTKQGGAGMILP NLIKRVYDALGYSNQEMDSFISKGFMISSDVAHGLHPNYPEKNDITNIPVLNKGLSLKIA CSQSYAGDAKAIAIVKGLCEEADAQYQIYVNRSDTPGGSTVGSISSAMLPMRTVDVGLPL LAMHSARELMGAADQEQLNRLMNHFLGDK >gi|292596546|gb|ADCV01000002.1| GENE 98 102467 - 105913 4367 1148 aa, chain + ## HITS:1 COG:BS_pycA KEGG:ns NR:ns ## COG: BS_pycA COG1038 # Protein_GI_number: 16078550 # Func_class: C Energy production and conversion # Function: Pyruvate carboxylase # Organism: Bacillus subtilis # 2 1145 4 1148 1148 1479 61.0 0 MRKIKSVLVANRGEIAIRVFRACNEMGIKTVAIYSKEDTLSLHRNQADEAYLVGEGKKPV DAYLDIEDIIRIAKEHDIDAIHPGYGFLSENEGFARRCEEEGIIFIGPKIKHLNMFGDKV NAREQAKLAKIPMIPGSDGALKDYAQLEEFADTHGFPLMIKAVNGGGGRGMREVHHKEDL RDAYDRAKSEAKAAFGDDDVYVEKLIVEPKHIEVQILGDEHGNVVHLHERDCSVQRRHQK VVEMAPAFALSLETRKAVCDAAVKIMKNVGYVNAGTVEFLVTADGSFYFIEVNPRIQVEH TVTEMITDIDIVHAQIRIAEGFSLHSPEVGIPEQDKIPCKGTAIQCRITTEDPKNNFMPD TGKILAYRSSGGFGIRLDSGNAFTGAVVTPYYDSLLVKATAFGPNNEETIRKMLRCLKEF RIRGVKTNIHFLINVLEHPEFQSGSYNVNFIEEHPELFELKPDRDRGTKLLRYIADVTIN GYSGAGAQEVPDFEPIQMPSALDVSPASGTKQKFDELGPDKFSKWLSEQKQVFFTDTTWR DAHQSLFATRLRTIDMARVAGHAAKGVPNLFSLECWGGATFDVSYRFLHEDPWERLRMFR REVPNTLLQMLLRGANAVGYTSYPDNVVRQFIQRAAANGIDVFRVFDSLNSLDNMHVAID EVRAQNKIAEVALCYTGDILDGARTKYNLDYYVNMAKELEKAGANIIAIKDMAGLLKPQA SYNLVSALKDAVSVPIHLHTHEGSGNSIYTYGRAVDAGVDVIDLAYSAFANGTSQPSMNS MYYALSGHERQPEMNIDYMEEMSHYFGSIRPYYKGVDKAEAYPNTEVYQHEMPGGQYSNL QQQAKMVGLGDRWTDIKKMYHQVNMMFGDIIKVTPSSKVVGDMTLYMVQNNLTEKDIYEK GDVLDFPQSVVEFFEGRLGTPYQGFPEKLQKIILKGARPITVRPGAVLPPTDFEHIRHEL SEMGAQTTDEDISAYCLYPKVYQDYNKFVKDFGDVSVLDTPTFFFGMKRGEEIQVTIEKG KTLIIKMNGFSEPDEDGNRIVLFEFNGQPRSIKVHDKHAKTTGVVRRKADESNPGEIGAT LSGSVVKILIKNGQSVTKGEPLIVTEAMKMETTITAPIDGIVEEILVREGSRIESGDCLL RIEDALKR >gi|292596546|gb|ADCV01000002.1| GENE 99 106112 - 106603 646 163 aa, chain + ## HITS:1 COG:BH3146 KEGG:ns NR:ns ## COG: BH3146 COG1327 # Protein_GI_number: 15615708 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Bacillus halodurans # 1 153 1 153 153 162 54.0 3e-40 MRCPYCQHTDTKVTDSRTTDEGNSIRRRRECINCGRRFTTYEIIEEVPLMVLKKNGRREL FDRGKLLNGLLRSCDKRTVPMSVMEQVVNDVERDIRNEINQEVTTDRIGELVLQQLKDID QVAYVRFASVYRKFDNIDSFMEELKALKKLDAKKPKRKPVVEE >gi|292596546|gb|ADCV01000002.1| GENE 100 106664 - 107590 972 308 aa, chain + ## HITS:1 COG:PAE0005 KEGG:ns NR:ns ## COG: PAE0005 COG2355 # Protein_GI_number: 18311646 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Pyrobaculum aerophilum # 1 308 2 306 308 135 30.0 9e-32 MIDLHCDTMMQLLDHPDSGDLYRNTWKIDIEKLQKAHSKIQDFALFINMGETNDPYGRYE EMRNLCVSQIHHYGEHIQHVLSYQDVESVYKTGKIGALMSIEEGGVLGGDLNKLKQAYQD GVRLITLTWNYPNGLGEPHCGEQHKKLTSKGVEFVEAMQELGIIVDCSHLNDAGTEQLGD ILDVPFIASHSNAREVRAHTRNLPDNLIRLIANKGGIIGLNFAQNFLGTSPISRIEDIVK HGLYLIDKGGEDVVALGTDFDGIPPDTEIADMSQMSRLYDAFKEAGLSVEQCEKLFWKNA DRLLKEIL >gi|292596546|gb|ADCV01000002.1| GENE 101 107590 - 108159 825 189 aa, chain + ## HITS:1 COG:jhp0791 KEGG:ns NR:ns ## COG: jhp0791 COG0279 # Protein_GI_number: 15611858 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoheptose isomerase # Organism: Helicobacter pylori J99 # 4 189 2 188 192 194 54.0 9e-50 MTDLNPIIADRFTEHLEVFGKTMEHMDTIQEIGYRCKAALENGNKILFCGNGGSAADSQH LAAELICRFKKERRSLAGIALTTDTSALTAIANDYDFESVFARQVEGLGRTGDVLIGIST SGNSKNVVKAAEMARSIGMHTIAFTGEGGGKLAELCDITLAIPSNVTARIQEMHILAGHI MCEIIEEDY >gi|292596546|gb|ADCV01000002.1| GENE 102 108253 - 109731 1596 492 aa, chain + ## HITS:1 COG:HI1526 KEGG:ns NR:ns ## COG: HI1526 COG2870 # Protein_GI_number: 16273426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase # Organism: Haemophilus influenzae # 11 486 5 474 476 369 42.0 1e-102 MINTTISQFLTKQLPNLKIAVVGDVMVDRYVFGDVSRISPEAPVPVNRVSKMKEVLGGAG NVASNLSNLDCKVYLGALAGNDDHGHLLKNLLDTDKIDTTGLITSDDRSTITKMRILGDR QQMMRLDFETITNLTNQEEQQLSVWLENLCKAGIDGIVVSDYGKGVCTPTLLKTIFGLAK EYGVQTIVDPKGADWSKYNGATCITPNVKELGECVGRTLENDDATIVEAAKSVLADVDLD YIVATRSAKGITVIAKDGRTWHNPATQQEVFDVSGAGDTVVSMMMTCLASGLSMRLALHI ANGAAGIVVSKVGTYPIHRSELLDLWHSYKHSIQSKPLYTKEEMKELVSQWQSKGETVVF TNGCFDILHRGHITYLQEAAQLGDHLIIGLNSDASVRRLKGETRPIVSEADRAALLSALQ CIDGVVLFEEDTPAELLAYLRPNTLVKGGDYKIEDIIGRESVDNVEVLSFKEGYSTSDIV GKIATMAKEGKL >gi|292596546|gb|ADCV01000002.1| GENE 103 109728 - 110693 1168 321 aa, chain + ## HITS:1 COG:mlr2565 KEGG:ns NR:ns ## COG: mlr2565 COG0451 # Protein_GI_number: 13472311 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Mesorhizobium loti # 1 313 1 310 316 324 53.0 2e-88 MIIVTGGAGFIGSNIVKALNDRGRTDILIVDDLTDGRKIRNIQNLEFLDYIDCDDFDCAI ADGTFDVGPIEVVFHEGACADTMEYNGKYMMKNNYEGSKNLFHYCQDRRIPFIYASSAST YGNGTNGFVEKPEAEEALNPYAYSKLLFDRYVRKYEGEYTAQVVGLRYFNVYGPNEAHKD KMASLVRQMFYKNKETGIINLFEGTDGYEDGGQTRDFIYVKDVVNVNFYFWEHPEISGTF NCGTGNAHSFNQFMQAVIDYNGQGKIEYVPFPEVLKGKYQSFTEADTTKLLAAGYDKGFH KMEDAVKEYCELLDNNEGYLR >gi|292596546|gb|ADCV01000002.1| GENE 104 110693 - 111187 471 164 aa, chain + ## HITS:1 COG:CAC3053 KEGG:ns NR:ns ## COG: CAC3053 COG0241 # Protein_GI_number: 15896304 # Func_class: E Amino acid transport and metabolism # Function: Histidinol phosphatase and related phosphatases # Organism: Clostridium acetobutylicum # 1 150 1 150 181 140 46.0 8e-34 MRKVLFLDRDGVINKDVSYLYKISDLEWVDGAKEALAYAHSKGYDLIVVTNQSGVARGYY KESDVQILHDYMAHELDRSGAPILHFYYCPHHKEGIVPLYAVECECRKPKPGMIKQAIKD YDVNISNSFLIGDSQRDVDAAEAAGIKGYLFKGSNLLDFIKTII >gi|292596546|gb|ADCV01000002.1| GENE 105 111258 - 112277 847 339 aa, chain + ## HITS:1 COG:VC0225 KEGG:ns NR:ns ## COG: VC0225 COG0859 # Protein_GI_number: 15640255 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Vibrio cholerae # 6 333 12 345 357 127 28.0 2e-29 MKDYKNILIIKMSSLGDVIHALPTLYAVRKNWPNARITWAIHEQFASLLPGTPWVDDVII IDKKQLKKPTYLYQLRKELHSRHFDMTLDLQCIAKSAIVSLLSGAPEKYGYWELREGSNL VNKALVGEHKYDHVIERYLDTVRVLGGEVEEIEFPMPAYVEAEKSIKQKLKCHGVDDEYI VVVPGARWIVKEWPLLNFGELCIRLCESGKKVVIAGAPDDVDKGAFIENYVKHKNLINLV GSTTMPELIELIRHCQIFISADTGPLHIANALKRPLIAMFGTTSPKRTGPYGGSHVHLII SPTSKATPEQPLVDDPDCMAQIPVDAVWSVYEQVLGKEL >gi|292596546|gb|ADCV01000002.1| GENE 106 112277 - 113317 1052 346 aa, chain + ## HITS:1 COG:rfaQ KEGG:ns NR:ns ## COG: rfaQ COG0859 # Protein_GI_number: 16131503 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Escherichia coli K12 # 17 344 5 333 344 103 28.0 5e-22 MELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELI VVDKKGRHNSISGLNEVAREINAKGKSDIVINLHPNERTSYLAWKIHAPITTGMSHFLFR PFMTKYTRLDRKTRHAADMYINVLEQLGVTDTSNSGLHIETCEEWRRQAREFYSGHGLTD TDILIGFNIGSAVPEKRWPAQRFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKP IVATGKFQLGPLAAAMSRCNLFITNDSGPMHVGISQGVPIVALYGPSNPFFYGPYQAHAI VLETMDSYEIGKSMKKIIKEGNYKGLSVISEEQVIKAAETLLLESK >gi|292596546|gb|ADCV01000002.1| GENE 107 113322 - 114305 680 327 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0761 NR:ns ## KEGG: Vpar_0761 # Name: not_defined # Def: exonuclease RNase T and DNA polymerase III # Organism: V.parvula # Pathway: not_defined # 1 327 1 327 327 653 99.0 0 MNYIVFDLEWNQPYSNDISFMKRTKMPLTGEIIQIGAVKLNEKMDIIDHFTMFIKPQYLT RMHKHVRELTGITTHELNHGVPFKTAMQYFQKWCGDEYMLLSWGSDDILILRENLMLHKM KALSYDQWVDAQMIYSYQRYGTSQQYSVAHAMEDLNISTEHLSAHNALHDAVFTAHICQT LDIAQGILHYDLIRKESSNPFLYPPILTFFMYENFSEKKRIVHDRRVRMSFCPYCQTRLE MTRPERLQGDKHLAIGVCPKHGDFAVQLKVGKYTIKSGSSKFYVTKVLTHCTDEIRSLYT QKSEINREKERKYLEYRKAEQEKVRQK >gi|292596546|gb|ADCV01000002.1| GENE 108 114377 - 115768 1622 463 aa, chain + ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 2 457 8 464 465 568 59.0 1e-162 MERKYAWHNYDDATMEKVYALSDTYRQFLDNGKTERECVVQAVEFAEAKGYVNLNDIIKS NTSIKAGDKIYYTHMDKSIALFNIGTDNIELGMNILGAHIDSPRIDVKQNPQYEDSNLVF WDTHYYGGIKKYHWVAMPLAIHGVVVKTDGTRININIGDKESDPVFCITDLLPHLGQEQM QKNAAKVIEGEALDLLIGSRPVKDEEKEGVTKFINSLLEKEYGFIERDLLSAELEIVPAG KARDMGFDRSMVMAYGQDDRVCAYTSLVAMLEVDNVKRTTCCLLVDKEEIGSVGATGMQS RFFENAVAEILTLMGKPNSVSVRRTLEKSRMLSSDVSAGYDPLYASAYEKKNASYLGMGV VFNKFTGSRGKAGSNDANAEYMGFIRRVMESNNVTYQTAELGKVDLGGGGTIAYIMALYG MNVIDCGVAVLSMHAPWEVTSKADIYEAKQCYVAFLNAADESI >gi|292596546|gb|ADCV01000002.1| GENE 109 115819 - 116196 486 125 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0763 NR:ns ## KEGG: Vpar_0763 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 125 1 125 125 201 97.0 7e-51 MKQTELGAAIESAKGEATEVKTVKVDIFDIPETKVEEYISNREEVAEAAAQVMKSYCVTV KRETLDPEEGEAVVGYYITGEILMCVILDPFEVPVMKVALDKGTLKDYILAANDLTEDML ASLEK >gi|292596546|gb|ADCV01000002.1| GENE 110 116328 - 117305 1215 325 aa, chain + ## HITS:1 COG:Cgl2198 KEGG:ns NR:ns ## COG: Cgl2198 COG2984 # Protein_GI_number: 19553448 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Corynebacterium glutamicum # 8 325 17 330 330 226 45.0 7e-59 MNLKKGIALALTAAALLAFTGCGSNGTTSNGEYKVGVVQLVEHPALDAANKGFVDALKEK GLAEKITFDQQNAQADQSNLNSIAQRFVSDRKNLILAIATPAAQSMANATHDIPILGTAI TDYEAAKLVKSNQKPGGNVSGTSDMNPVEQQVDLILRVMPNAKTIGTIYSSSEVNSQIQV EKMKAYAATKGIKVEEVTVSNVNDIQQAAQNLVSQRVDAVYVPTDNVVASAMSNLVAITD PAKIPVFGGEDNHVKGGAVMSLSVDYYKLGYQTGLMAAKILTGEAKVEDMPIEMQKEFKL VVGKDKLEKLGITLPEDLMNKATMI >gi|292596546|gb|ADCV01000002.1| GENE 111 117330 - 118310 1508 326 aa, chain + ## HITS:1 COG:SP1069 KEGG:ns NR:ns ## COG: SP1069 COG2984 # Protein_GI_number: 15900938 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 34 326 52 341 344 213 44.0 3e-55 MNWKKSIAVALSAIAVMAMVGGCGSNTATNDQKKIGVIQLVEHPSLDAANKGFVDGLAAK GFKDGQNIKIDQQNAQADQSNLNSIAQRFVSDKKDLVLAIATPAAQTMANASHDMPIMGT AITDYVTAKLVQSNEHPGGNVSGTSDMTPVEKEVDLIIALVPNVKRIGAIYTSSEINSQL QVEKMKAYAATKGITVVEATVSNVNDIQQAATNLVNQDVQAIYTPTDNVLASAMANLAQI TDAAKIPVFAADEGMTMTGGVATYSVDYYQLGYQTGLMAAKVLAGEAKIADLAIETQKEI KLTVNEERAKKLGITIPEALRKDMKQ >gi|292596546|gb|ADCV01000002.1| GENE 112 118322 - 119194 1228 290 aa, chain + ## HITS:1 COG:Cgl2197 KEGG:ns NR:ns ## COG: Cgl2197 COG4120 # Protein_GI_number: 19553447 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Corynebacterium glutamicum # 5 287 1 282 296 208 48.0 1e-53 MLDLVVGTITTGLLWSLLAVGVFITFRVLDVADLTVEGTFPMGAAISAILITSGMNPILS ILLAGVGGMIAGAVTGWIHTKLKIPALLAGILTMIALYSVNLHIMGKANVSLLRMDTIYT ILGGFFHTPNMWSAAIVGIIVAVVVCLLLFWFFGTEIGTALRATGVNPQMIRAQGVNTDN MIVLGLLISNGFVGMSGALIGQFQGFADVGMGIGTIVIGLASVIIGEVVFGTKSFVRSLI AVVLGSIVYRIVIAAVLYMGMPPNDLKLFTAILVAIALSLPTLKAKWLAR >gi|292596546|gb|ADCV01000002.1| GENE 113 119205 - 120002 261 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 228 1 218 245 105 35 3e-21 MLEVKNMVKTFFKGTINEKTALQGINLRLEEGDFCTVIGGNGAGKSTLLNSIAGVFPVDE GSITINEIDVTKMPEYKRAKYIGRVFQDPMVGTAGNMQIEENLILAMRRGKSLGLKWAFK DSEQAFFKERLALLGLGLEDRLSARMGLLSGGQRQSITLLMATMLRPELLLLDEHTAALD PKTAENVLQLTDKLVAEHNLTTLMITHNMRDALRFGNRLIMMDAGRIIYDVKGEEKKQLT VADLLQKFEVAGDNALSDRMVLGAK >gi|292596546|gb|ADCV01000002.1| GENE 114 120174 - 120440 441 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371401|ref|ZP_03854885.1| SSU ribosomal protein S15P [Veillonella parvula DSM 2008] # 1 88 1 88 88 174 98 3e-42 MLTTEAKLAVIKEYATHEGDTGSPEVQVAILTSRIQYLTEHLKEHKKDHHSRRGLLKLVG QRRNMLDYLRRKDIERYRSLIERLGLRK >gi|292596546|gb|ADCV01000002.1| GENE 115 120552 - 122621 1654 689 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 5 685 8 692 714 641 49 0.0 MEQFQMDLAGRMLTIETGELAKQAGGAVMVGYGDTRVLVTATGSKEAKDIDFFPLTVDYE EKMYAVGRLPGGFIKREARPPESAILNSRLIDRPIRPLFNKGVRNEVHVVATVMSVDQDC DPAICGMIGASAALSISDVPWNGPIAGVRMGRINGEFVVNPTKSQLEETDLNIVVAGTKD AILMVEGGAEEVPEDIILEVIMAAHEEIKKIVAFQEDMTAKVGKEKRVFECKDVPAEISD AVRAYGHDKLDAAVRCADKQQRDAQENEVRADVLAHFEEIYPDNLADVNKAFDAMTKEIV RHMITVEKIRPDGRQLDEVRPISCRTGVLPRTHGSGLFTRGQTQVLNVTTVAPLSEKQTI DGLGVETEKRYIHHYNFPSFSVGETRSSRGPGRREIGHGALAERALVPVIPSEEDFPYAL RLVSEVLESNGSSSMASVCGSTLSLMDAGVPIKAPVAGIAMGLVTQGEHYTILTDIQGME DALGDMDFKVAGTAKGVTAIQMDIKISGLSREILQEALEQAHKGRMHIMGIMLDTIAEPR QQMSQYAPRIITMKIDPDKIRDVIGSGGKVIRSIIEETGAKIDIEDDGTVFIASVEQEGA AKAQEIITNLTKEVEVGEVYLGKVTRLMAFGAFVEVLPGKEGLVHISKLAKERVENVEDV VSVGDEIMVKVIEIDKQGRVNLSRKDCLK >gi|292596546|gb|ADCV01000002.1| GENE 116 122632 - 123081 531 149 aa, chain + ## HITS:1 COG:SPy0235 KEGG:ns NR:ns ## COG: SPy0235 COG0756 # Protein_GI_number: 15674420 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Streptococcus pyogenes M1 GAS # 3 147 4 147 148 155 54.0 2e-38 MDIRGFEVVSAFEEQDINLPTRKTTESAGYDIECAEAVTLEPGQVVLVPTGIKAFMAYDE YLAIHIRSSMAIKRHLALVNSTGIIDSDYYNNEDNEGHIMIALYNFGKEPVTLEKGERVA QGIFSKYLITNDDDATGVRTGGIGSTGTM >gi|292596546|gb|ADCV01000002.1| GENE 117 123228 - 124853 994 541 aa, chain + ## HITS:1 COG:NMA1475_1 KEGG:ns NR:ns ## COG: NMA1475_1 COG0500 # Protein_GI_number: 15794376 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis Z2491 # 36 284 41 287 287 291 57.0 2e-78 MKQESKQKKNVGTSVMGNDIETTQNTMHVLDENKVLKKSYEDVVYISQPFGATSLNTLAA RALLFGLNPVSLKKARVLELGCSFGGNIISQALYYPEASFTGIDLSSSQIKMGNELIASM GLSNIHLLEKDILDIDDSFGTFDYIIVHGIWSWVPDVVKDKILSICNKNLSDNGVAYVSY NTYPGWKRLEQYREIMQYAEQKELELPLMERTLYTKNILKLVADTMGLDNRISQKASYKI DNIQNVLSSNDYYVAHEYLEPFNDPVYVHEFIKRANDQGCAYIGDVFLSRSFISWLPEDI HDNIAQLANDDYIAKEQYYDYIYDTQFRMSLLTKNKHSKKIVRNERVSIDVLSKLYYCSV VNTGIPSNMTDSIHIAIKEVMDRGDIFTVQDIVDHIHRKLPGYTIEMDRVYSRLLYLIIV DNLDMYAEPYERVAFEDNKVYIPQRFIDFISTIVEKEGSSYIGIGDMYNKVQQDIDNGFL FVIKQMVEPTTKEKILAIMDDNITVQRHTRDNIDFIVPNKVYLEEILQRIRMLGFLHKIK D >gi|292596546|gb|ADCV01000002.1| GENE 118 124862 - 125395 655 177 aa, chain + ## HITS:1 COG:TM1181 KEGG:ns NR:ns ## COG: TM1181 COG0494 # Protein_GI_number: 15643937 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Thermotoga maritima # 6 169 5 168 179 147 48.0 1e-35 MAISKEIQKSSEMKFNGKLIQVTYDIADVNGKDAWREVVHHPGATAIVAVTEDNKIVMER QFRYALQQTLLEVPAGKLDPNEEPIVCAKRELAEETGYRAAQWISLGTIATSPGFCNEVL HLYLAKDLTMGETNWDPDEYVELEYYTLTELLEAIKNEAIKDSKSLAALMLAMPYLK >gi|292596546|gb|ADCV01000002.1| GENE 119 125526 - 126698 986 390 aa, chain + ## HITS:1 COG:BS_drm KEGG:ns NR:ns ## COG: BS_drm COG1015 # Protein_GI_number: 16079407 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphopentomutase # Organism: Bacillus subtilis # 2 389 6 394 394 384 50.0 1e-106 MYNRIILLVMDSVGVGHAADAIKFGDEGSNTLGHIEAVAGPIRCPNLKSLGLANIADISA FDEPVIGAYGRMAETSTGKDTTSGHWEMMGHPVTVPFPTFYDGFPKELMDAFIKETGYGF LGNEVASGTEIIERLGEEHIRTGKPIVYTSADSVFQIAAHEDIIPLEDLYRMCQITRDKV CVGDYYVGRIIARPFVGTPGHFVRTSNRHDYSRMPEKKMVQQELQDANIPTVAVGKIGDI YAHVGWDASYPTKSNAHGMNVVPYLLGQSFTRGFMMVNLVEFDSLYGHRRNVEGYKRAIE DFDYQLGGLLDLLKDDDLLLITADHGNDPTWKGTDHTREMVPLLAYSPSMSHSVALGDRH SFADIGETVLQNFGLKQWGIGSSFLNSLKV >gi|292596546|gb|ADCV01000002.1| GENE 120 126994 - 129198 2164 734 aa, chain - ## HITS:1 COG:FN1603_3 KEGG:ns NR:ns ## COG: FN1603_3 COG5324 # Protein_GI_number: 19704924 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 412 685 2 273 273 214 41.0 5e-55 MRTLLLMRGAPASGKSQWIRDNNLEAYTLEADHFRMLLRSPSLGENGWYISQEDNGPTWK LLLDCLEKRMSNGDFVVLDATHTTSKAINAYKELLNKYKYTVYYYEPNTSLEDCLARNAA RTDYKRVPEQVIHYMYKTIKTSTLPNFCKRINSIDEINNYFTANLTNKYNRVRIIGDIHG CYTALQQAITPWDEKTLYIFCGDYLERGIENKEMMYEMMRLSTLPNTIMLEGNHERHIAN FAFHTNLDRSKRFMKDVVAPIVKDMTKKEVESLQRELRLFYKSLRQCYPFSFHGKKYLVS HGGLSYVPNMTFIATSTFINGFGAYETNIANIYDTNYEQGMCQDFIQIHGHRGVPDGKYS FCLEGEVEFGGELKYIDITANTFTKNGIKNDVYDKDYMRHEFQNMTQHIIFTQNEDINII GNSKLVKVKQCFPNLYSLNFTSRVFHKRLWNESTVHARGLFVDRITGDVKLRSYNKFFNL GERPETELDNLANTLSFPVEIRTKENGYLAILGVINEELVFASKSTTEGIHVDLFKKLFH RLPENLQAKIKDLLARNNCSMIFEVISQEDTHIIKYDQDHLYVLDMIQNTLDVNGKHIDV PFSREKLAELYTILQKYDTDLISIVKTVQQISTMDELQDIINEELNSCHESEGFVLVDSN GFMTKFKGPYYNMWKHRRNRILEPYQKFGKIPYENCKNEDDTKFANFLGSLDYDVVCKST ILDIKDMMESQGLL >gi|292596546|gb|ADCV01000002.1| GENE 121 129344 - 129604 401 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371391|ref|ZP_03854875.1| SSU ribosomal protein S20P [Veillonella parvula DSM 2008] # 1 86 1 86 86 159 98 2e-37 MPNIKSSIRSVKTDAERRAKNAAVKSQIRTAARKTVEAVQAGAVEEAKQALVHATSVIDK AASKGVLHKNTAARKKSNLAAKVNAL >gi|292596546|gb|ADCV01000002.1| GENE 122 129872 - 132493 3327 873 aa, chain + ## HITS:1 COG:BH3153_2 KEGG:ns NR:ns ## COG: BH3153_2 COG0749 # Protein_GI_number: 15615715 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Bacillus halodurans # 450 869 146 565 569 442 54.0 1e-123 MKKLMIIDGSSLLFRAFFALPPLKSALGTPTNAVYGFLTMLIKLYEEINPDYIAVAFDKG RQTFRTEMYSEYKGNRPDAPEDLRPQFSLIQDVLKALGICVIEEEGFEGDDILGSLSKKF GAPDMAVQIITGDRDNLQLVTEHSHVFLTKKGISDMLEVTLDNMEELYGYGPDKVIEMKA LMGDSSDNIPGVPGVGEKTALKLITEYGNLESVYDHIEDISGKKLKERLVENKELAFLSR ELATIKTDMELSYKVEDFVQNFHASEVQPLFETLGFTKLTPRIAQVMGCEEVALGDPGSL FAPQEEISLNDLADAKSLTADFYKDKTVAVHVILDGKTPFRTVTNAYLSNGDTIVKTDDT KAVLAVLQGAKAIVTTQTKEIIEAFGADVPAEISLFNADKTARVHDMSLIAYLLDPTRTN YGYLYLTERFSVPSIANGSVDVECVSMVKALLAMNEVACESARREELWSLYETIELPLIH TLVVMEKNGIYIDTEKLAETTARFKEELTQVQEEIYELAGETFNINSPKQLGVILFEKLN LPIIKKTKTGYSTDAEVLDMLRHESPIVEKILAYRSVAKLVSTYCEGLAVLINDKTHRIH TTFNQMVTATGRLSSSDPNLQNIPVRTEKGREIRALFYPGAGYDTLVSADYSQIELRILA HLSGDEALIKAFVEGKDIHRFTAAEVLGKSQDEVTSEERSHAKAINFGIIYGISDFGLSR DLGITRGEAKNYIDLYFSRYPKVKEYMDRMVQEAHETGKVRTMFGRQRELPDINSRNFNR RSFAERTAMNTPIQGTAADIIKLAMNQVEQKLEEQNFTSRLLLQVHDELVLEVVNSELEA IEELLRSTMQSVVELQVPLIVDVHHAENWALVK >gi|292596546|gb|ADCV01000002.1| GENE 123 132523 - 133125 472 200 aa, chain + ## HITS:1 COG:lin1598 KEGG:ns NR:ns ## COG: lin1598 COG0237 # Protein_GI_number: 16800666 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Listeria innocua # 4 178 5 179 200 162 46.0 4e-40 MFKIGLTGGIASGKSTVLTYFKDKGIPYIDADIVAREVVEPGTKGLEAVVDAFGTDVLRD DGTLNREALGAIVFHNAKKRQQLNGCLKEHIQNRIMELTAHYEELHTPVLLYDIPLLIEG EWYTMMDEVWLVYVNESTQIERLMSRNGLTEEEALARINSQMCLEDKRSYADVIIDNNGT PLNLREQLDNIWDERIESVL >gi|292596546|gb|ADCV01000002.1| GENE 124 133287 - 133841 482 184 aa, chain + ## HITS:1 COG:slr0534 KEGG:ns NR:ns ## COG: slr0534 COG0741 # Protein_GI_number: 16332023 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Synechocystis # 29 180 682 833 847 122 42.0 4e-28 MKRATATALSCVVLGWFYFTYLDDHLARQIAYPFNYKEEVIAAAEKEQVPPSLVASVILA ESKYKNTAESETGALGLMQLMPDTARWVAQQVGHGNYTDRQLKEPTINIELGTWYLGHLL KEFNGDQVLALAAYNAGRGHVESWLRENNWNGMVDTIPFPETRSYVKAVLQYQERYEALY GNNY >gi|292596546|gb|ADCV01000002.1| GENE 125 133825 - 134520 648 231 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0781 NR:ns ## KEGG: Vpar_0781 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 231 1 231 231 455 94.0 1e-127 METIIEACKALDYSWLPQTVDGFTLVTSTESDYTILANRISAGEDVLKVPIFHYQNELGW RWSALYDKEVEDYTVHIEMPLFSFVDISFVRADLESFWTGLQERCVKGLTNMLIEPANNF TFTYRRRGIPEWDFSQVMPEELEGFVRDIDPAHAIRMINGSFIIGEYHKMDECTGLLLYY NELRDEYFAELRYKSYPEIDHHLDAKNLDDLAVLLREHLGAILKGLNERID >gi|292596546|gb|ADCV01000002.1| GENE 126 134828 - 135286 588 152 aa, chain + ## HITS:1 COG:BH2417 KEGG:ns NR:ns ## COG: BH2417 COG0779 # Protein_GI_number: 15614980 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 4 152 3 156 156 111 40.0 4e-25 MKREAVEEFVSSVVEGIIAGTDMELVDVDYVRERDWYLRVYLDKPGGVDLDDCQLVSEKL SAVLDEKDPITENYLLEVSSPGLDRVLKKDKDLVRYNGRDVDIQLFKPVNGSKQFTGALQ GFTDTSIDFTINGESITFERSAIAQIRLHLDF >gi|292596546|gb|ADCV01000002.1| GENE 127 135304 - 136380 790 358 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 345 9 350 537 308 45 1e-82 MSQELIQAVMVLTKQKGFAPEVIFESLEAALLQAYRKEPTSNPDAYVVIDRETGVYKVMA KKQVVETVELPETEISLLDARKKDKRFEIGDVVEVDVTPANFGRSAAHTAKQMLIQRLKE AERSVVYEEYYSREGDIITGVITRVEGKNVFIDLGKTEAILPPTEQIATETYREGDRIKC YIVEVKKTTKGPQIMISRTHPGLLKRLFELEVPEIFEGVVELKSVAREPGMRSKIAVYSR DENIDPVGACVGPKGQRVQHIVDELHDEKIDIVKWDEDPAIYIANSLSPAKVVSVDVSEE EKASYVVVPDYQLSLAIGKAGQNARLAAKLTNWKIDIKSETQAAEEPFTGFGNAEDGE >gi|292596546|gb|ADCV01000002.1| GENE 128 136383 - 136652 210 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein [Dictyoglomus thermophilum H-6-12] # 2 87 3 88 98 85 45 2e-15 MKPKSQPMRTCVGCGEPKAKRELIRVALSPDGNITIDRSGKAPGRGAYLCESMSCFEQAY KAKRLERSLKHSVSKEIYEALQRDLQENE >gi|292596546|gb|ADCV01000002.1| GENE 129 136665 - 136970 489 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371383|ref|ZP_03854867.1| ribosomal protein HS6-type (S12/L30/L7a) [Veillonella parvula DSM 2008] # 1 101 1 101 101 192 98 9e-48 MNEDKILNLLGLAQRAGKVISGDFIVEKAIKRKEPKLVLLAGDCAANNEKKYTQLAETHH IPLHSIANKEALGTAIGKEVRVVVAVLDDGFAKALLKEIDR >gi|292596546|gb|ADCV01000002.1| GENE 130 136986 - 139448 3327 820 aa, chain + ## HITS:1 COG:BH2413 KEGG:ns NR:ns ## COG: BH2413 COG0532 # Protein_GI_number: 15614976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Bacillus halodurans # 1 816 1 727 730 641 48.0 0 MSKKRVHEIAKEFGVESKQVISILQQNNINVTKAVNSVDDSGYEIVKKQLGKKSEAPKVA QKIEKKVEQKSAPAAHKQDVASHKQHPNRSNEQKKDKHKQSGQKQDDQSKQKDHKKGNVR HVQISEPTRKSDGNQHGGDRANNRPNNTRNNDNRNNVRSNDARNNDNRNNDNRNNDNRNN DNRNSNNDRRNKKNKKGGNNRPQSLLSTSMQKKKNRVKHRNEQYLQQKAEAERKAEAAIA TEIELSGPLTVKELAEKMGREVSEIIKKLMLLGVMASINQEVDVDTATIVAEEFGVTVTE VEPEEDPTDVIEIEDAPETLKPRPPVVTIMGHVDHGKTSLLDVIRQTNVTAGEAGGITQH IGAYQVRYKDNKITFLDTPGHEAFTAMRLRGAKSTDIAVLVVAADDGVMPQTIEAINHAK SADVPIIVAINKMDKPGANPDHVKQQLSEHGLLPEEWGGDVIMVPVSAKQKQGIDDLLEN ILLVAEVMELKANPNRKAYGVVIEAQLDKGRGAVCTVLVQKGSLRVGDTVLAGTAYGKVR AMTNERGEKVKVARPSMPVEILGFSEVPQAGEIINGMDDNEARAIAEKRIAKQRVQELQA THKVTLDDIFNQIQQGELKDLNIIIKADVQGSVEALRQSLEGIKNPEVRIVIVHAAVGAI NESDIMLASASNAIVMGFNVRPDANVRRAAEQEKVDLRTYRVIYDAINDVESAMRGMLAP QFKEVVVGRAEVRQVISTPKAIVAGSYVTEGRITNDSEVRLIRDGIVVFEGKVDSLRRFK DEVKEVKTSFECGISLEGYRDIKEGDVIEAYLMEEIAPQL >gi|292596546|gb|ADCV01000002.1| GENE 131 139458 - 139814 548 118 aa, chain + ## HITS:1 COG:lin1364 KEGG:ns NR:ns ## COG: lin1364 COG0858 # Protein_GI_number: 16800432 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Listeria innocua # 3 115 2 114 114 107 45.0 6e-24 MSDVRVRKLQEFIKQEVSQMLMRGLKDPRIGFTTITDVHVTGDLREATIYVSLFGSDKEK EDTLIALKHAAGHIRTELGKVLKLRHIPSITFDKDTSLDYSMHIESLLNEIKKDEEIN >gi|292596546|gb|ADCV01000002.1| GENE 132 139832 - 140773 937 313 aa, chain + ## HITS:1 COG:CAC1804 KEGG:ns NR:ns ## COG: CAC1804 COG0618 # Protein_GI_number: 15895080 # Func_class: R General function prediction only # Function: Exopolyphosphatase-related proteins # Organism: Clostridium acetobutylicum # 16 313 13 317 321 161 35.0 2e-39 MSKITINQLHMALCEANSIMLTVHIRPDGDAIGSMVAFYEALVGQGKTVYMVVDDVVPEK YTFLRYTDHIHDVAYFETNPVDIDMLMVLDASTYERIGKVGALWSAPIFNIDHHISNTEF ADHLYLKPDFAATGEIVTDLCTKWNWPITESMGTALYMAIATDCGFFKFSNTTANTLEMA AKCVAAGARPNVISETIEAVSASRLELTKQVMQTIEFYKNDTIATIELNREAMTILGDDT DGFVDIIRNVDTVDVAILLKAEADDITRVSLRSKGIDVNVVASHFGGGGHIRAAGCTINL PLEEAKQALIEVI >gi|292596546|gb|ADCV01000002.1| GENE 133 140776 - 141717 758 313 aa, chain + ## HITS:1 COG:BH2410 KEGG:ns NR:ns ## COG: BH2410 COG0130 # Protein_GI_number: 15614973 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Bacillus halodurans # 1 270 3 261 304 182 40.0 8e-46 MDGILPFLKPPGITSHDAVAICRRILKEKRIGHSGTLDPMAYGVLPVFLGKATRLIEYTD EFDKTYVAECKLGTFTDTEDSSGQPVLPDNDMLLRDGIVLNRAIQSTEISTTMVKPGFEE LVSILRKFAGVQDQRPSKYSAIKVNGIRAYEYARKGIPVELPLRQIHIKNIELIAYGFPF FTVRVTCSGGTYIRSLLRDICIALGIPGAMTSLARTQVGPFDIGSAKMAEELMLHGESLL LPTDTAVSHLSKVTVNSVQLRMMIEGKQLPIGKEFAFTEIGQLYRAYGPNGFIGIMKRNN HTLKVEKNIFIEG >gi|292596546|gb|ADCV01000002.1| GENE 134 141720 - 142652 420 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 20 302 21 307 317 166 33 9e-40 MKQLHSFDELRQIKDTKVYALGTFDGIHRGHQRVIHKAVEEAISVDGVSIIITFEHHPLT ILHPERVPKRVIQEEIMDTVLEELKVDYILRLPMTEALLKMTADEFLHELCNDMNVEAIV IGENFTFGAKGLGNPEYMKQVVADKNIRVLVQPLLPCDGSSTPISSTEIRKAIHEGHLED ANHWLGRPFQFKGTVIKGDQRGRTLGFPTLNLLLPNEMATPPDGVYANRVCIDGIWYDGV GNIGDNPTFRNQYHRCEVHVFNFDQDIYGKEVIVQFISYIRGEVKFNNLQDLIDQMKVDE EQALAILANA >gi|292596546|gb|ADCV01000002.1| GENE 135 142665 - 143429 934 254 aa, chain + ## HITS:1 COG:CAC0898 KEGG:ns NR:ns ## COG: CAC0898 COG0703 # Protein_GI_number: 15894185 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Clostridium acetobutylicum # 90 249 2 160 165 117 39.0 2e-26 MDIKEARKQIDSIDSVLVTEFEKRLTLIKEIGKYKDEHHLPLIDEERDESIIALHTQNCK DKVLAPYVENYIKTVVSMSNEFLKEHMHKHIFLIGMPGAGKTTVGKVLAKELGRDFFDLD QTIQDKVGKSVQNIYIYDGKDAFSEYEYSTIKELIHNKPSVIATGGGTVTYDKTVKLMRN NGLVVFVNRDVNHILDDLDLEIRPLVKESIEYIFNVYEERYPLYEEVAHIKIGNEGSITD AVQEIIEALPNTEK >gi|292596546|gb|ADCV01000002.1| GENE 136 143429 - 145582 2104 717 aa, chain + ## HITS:1 COG:all7071 KEGG:ns NR:ns ## COG: all7071 COG0507 # Protein_GI_number: 17233087 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Nostoc sp. PCC 7120 # 2 711 17 743 748 370 31.0 1e-102 MDAIRGFVYRTIYENTQRTYCVFILKDYNEEYITCTGKFESPKEGEDIEVRGRYVEHEKY GRQFDASSVEKLKPDNMGAAKTYLLNLGIKGFGEKSVEKVLEYFGIRILEILREERPEEI KDVPGLRKSVKDELFNTLLGEGILSDLNHFFESHHISSKWSRIVYTYYGVQSVAVIEDNP YTLLRVAPDMLFGTADTLAEHLGINGSDTRRLEAGLEWILRSLDNQGHTCLPVDQLIGRL DDLLQTDVDDIANFIESLLEQGALYSTYYEDILYIYPPEMYVSEVEGVHYTREFLLEADP IALDISSFIEKFERDNYIIFGDAQKEAIQLSFFEKFSLITGGPGTGKTTIIKALVKGFQL GGLGRIILCAPTGRAAKRLTEATEFEATTIHRLLVPVQGSDSYDFTKNEDDPLDIDVIII DEASMLNVRLFYSLMAAIPKEAHVIIVGDVDQLPPIGAGFVLKDLLDSDCVPYTRLNQIY RQSSGNTIVESAYAINRGEMPNLEGVSEEFSFIPVKSYDMMMKAIIDVYKREQETIEDEL DIQIISPMRRGEAGSTLISQYVQQAVNPPDSYKGEVRVNGITYRVGDKVIQILNDYELEV FNGEIGVIYAITRTDICIRFIHKEVRLPIDEAHMIMPAYAITVHKSQGSEYGVVIIPFVP RYGGMLQRNLLYTAVTRAKRKVIIVGTTSAVERAVRTVNADERYTLFKERLQGRCDS >gi|292596546|gb|ADCV01000002.1| GENE 137 145582 - 146277 551 231 aa, chain + ## HITS:1 COG:FN1368 KEGG:ns NR:ns ## COG: FN1368 COG1040 # Protein_GI_number: 19704703 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Fusobacterium nucleatum # 6 227 4 196 204 75 27.0 6e-14 MSLWDFLFPPVCPHCGAPVATQGDWCKACFTDLLHIRHVPHKFLHYVDDVCVLAEYRGGL KSMIYDVKFNEKKEQSKGAAPFLVSYNFYMKYNESNIVNSNCKIMYDYIVPVPSSEKKKA KRGYNQVDLFFLEWAHSLWEIDRKNFKWLDCIYKFDTSRDMWGLTNKERHQNIDDAFVIC ADYKDIDFTNKNILIVDDIYTTGATIEAVAKVLQKHKALRIDALTLASGSF >gi|292596546|gb|ADCV01000002.1| GENE 138 146319 - 146921 679 200 aa, chain - ## HITS:1 COG:TM1699_2 KEGG:ns NR:ns ## COG: TM1699_2 COG2206 # Protein_GI_number: 15644447 # Func_class: T Signal transduction mechanisms # Function: HD-GYP domain # Organism: Thermotoga maritima # 31 197 1 167 172 114 36.0 9e-26 MFMLSLMQPSGLYELEKDSLEAISAQLLQMIQMKSYHLYTHSIQVSNYAVSIAAKMGLPL NEIEQIRHAALLHDVGLLMVPNALIQKSPYLNKQEMSKYKQHAASGANMIENYPCCQQIL PYIRYHHEKWDGSGYPKHLRGANIPLGARIIAVADYYDTTVNPSTEFWAKTKAKAKEELF SASGSLFDPDVVKAFIDVLG >gi|292596546|gb|ADCV01000002.1| GENE 139 147172 - 147267 74 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNILGFLFQFSIHQQIGVAKFILIVLRIMR >gi|292596546|gb|ADCV01000002.1| GENE 140 147825 - 148631 923 268 aa, chain + ## HITS:1 COG:AF0231 KEGG:ns NR:ns ## COG: AF0231 COG0834 # Protein_GI_number: 11497847 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Archaeoglobus fulgidus # 37 253 40 262 264 162 39.0 8e-40 MLNSKVKKIILGGCMLVMAASLVGGCGSSNQPTSNKLVVGTNATFVPFEFKDEKTQDYTG FDIELIRAIGKRINKDVELKNVAFDALIPALNTHDIDVAASGMTITKARSEKVLFSSPYY ENALAVVYKDGTAVNSLDDLKGKKIAAQLGTTGADLAHKIEGTTVKEFDHSNEALLELQN SGVDATVIDLPVAQYYSTKHPDQHIKFMAYPNTKEYLGLAINKDNKALQEEINKAIADMK ADGEFNTLYKKWFNVDTPADMPVVLEFK >gi|292596546|gb|ADCV01000002.1| GENE 141 148643 - 149299 795 218 aa, chain + ## HITS:1 COG:alr3187_2 KEGG:ns NR:ns ## COG: alr3187_2 COG0765 # Protein_GI_number: 17230679 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Nostoc sp. PCC 7120 # 7 212 14 224 240 216 54.0 3e-56 MSFNWGLIADNLPLLLQGALVTVEITAMSVGCGFFIGLLVSLANLSKFRLVRLLAKCYVD IIRGTPLLVQIFLIYFALPMITGQRIDPYIAAVTACSINSGAYVSEIFRAGIQSIDKGQM EAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLII AKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK >gi|292596546|gb|ADCV01000002.1| GENE 142 149296 - 150021 638 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 242 245 250 50 5e-65 MIKLENVHKSFGKNEVLKGINLHIKQGQVVVIIGPSGSGKSTLLRTMNYLEEPTSGKVIV DGMDLSDKKKLNDVRAEVGMVFQNFNLFPHMTVMENLTLAQTKVRKTSMEEAKKIGQALL DRVGLADKANAYPDSLSGGQKQRVAIARALAMKPKVMLFDEPTSALDPEMVSEVLDVMKS LAEEGMTMVIVTHEMGFAKKVADRVLFVDGGLILEDNTPERVFDAPTNERTKSFLDKILL D >gi|292596546|gb|ADCV01000002.1| GENE 143 150538 - 150735 377 65 aa, chain + ## HITS:1 COG:BH3610 KEGG:ns NR:ns ## COG: BH3610 COG1278 # Protein_GI_number: 15616172 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Bacillus halodurans # 1 64 1 64 65 95 76.0 3e-20 MLGKVKWFSAEKGYGFIEREDGSDVFVHYSAIQDEGFKSLTEGQNVEFEIVDGNRGPQAA NVVKA >gi|292596546|gb|ADCV01000002.1| GENE 144 150977 - 151504 868 175 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371369|ref|ZP_03854853.1| sigma 54 modulation protein; SSU ribosomal protein S30P [Veillonella parvula DSM 2008] # 1 175 1 175 175 338 97 1e-91 MKVAIRGKNIEVTDALRAYIEKRLSKLTRYFDDELNAQAVLSVVKDKSTIELTCFVDKIV LRGVETNDDMYAAIDLVVDKIVRQIHKYKTRLAKRFKKQEAFHPETLATPVEEETIEVVK RKHFVVRPMDVEEAILQMNLIGHDFFMFFNAETESMNVVYRRHDGFYGLIEPELQ >gi|292596546|gb|ADCV01000002.1| GENE 145 151723 - 154158 2837 811 aa, chain + ## HITS:1 COG:BH3606 KEGG:ns NR:ns ## COG: BH3606 COG0653 # Protein_GI_number: 15616168 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Bacillus halodurans # 1 788 1 786 838 880 57.0 0 MLSFLQRLLGNNNAKEIKKMRAIADHINEIEPNYIKLSDANLVAKTDEFKRRLQKGETLD DLLPEAFAVVREASKRVLGMRHFDVQLMGGICLHNGNIAEMRTGEGKTLVATLPVYLNAL TGKGVHVVTVNDYLATRDSEQMGRLYNFLGLSTGLIVANLDFNQRKEAYACDITYGTNNE FGFDYLRDNMVTDVVQMVQRPLNYAIVDEVDSILIDEARTPLIISGPGQRSTDNYYKLAK IVPHLIKDEDYVIDEKQKTIAPTDSGIAKVEKMLGVENLYDAENIELNHLLGASLRAYAM MHRDTDYVVKDGEVVIVDEFTGRLMFGRRYSDGLHQAIEAKEGLKVERESQTLASVTFQN YFRMYDKLSGMTGTAKTEEKEFIDIYGLEVIPIPPNKPLIRMDLPDQIFKTKAAKYRAVV RNAVERHQIGQPILIGTTSITQSEELSDMLLRAGVPHKVLNAKHHEQEAEIVAAAGQMGM VTIATNMAGRGTDITLGEGVPELGGLAILGTERHESRRIDNQLRGRAGRQGDPGSSQFFL SLEDDLMRIFGADNITGIMDKLGMEEDEPIEHSLITKSIERAQKKVEDHNYNIRKYVLEY DDVMNQQREVLYEQRRRILRNESLRETINEMIDKLVTESVDAYADEKLYPEEWDYEGLYK HLSQYFLTEEIMSSQDMEEYSRQDLLERLLEIAHEEYQDRVDMLGEAMFSQLEKAIMLRV VDNKWMEHLDNMDMLREGIGLRAYGQKNPLVEYKFEAFDMFQNMIAAIQDETIMALYKIR AQLIQEIEEPVDHLEGAQSHHEDVLEPQNID >gi|292596546|gb|ADCV01000002.1| GENE 146 154394 - 155386 1130 330 aa, chain + ## HITS:1 COG:BS_prfB KEGG:ns NR:ns ## COG: BS_prfB COG1186 # Protein_GI_number: 16080582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Bacillus subtilis # 1 325 40 364 366 375 56.0 1e-104 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS VETGNVQAVMDGNLDPFIEGFLKKEANLTI >gi|292596546|gb|ADCV01000002.1| GENE 147 155395 - 156090 851 231 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0802 NR:ns ## KEGG: Vpar_0802 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 231 1 231 231 384 98.0 1e-105 MKKFLLFLLVLIIALVVASQFLLPSFIGSRIESQLNETLKPTAQTVNVEAQPAFKILYGE VDRVYGTLENIKLGKLNFASFRFDAKQIFVNPISLLASQQIDIVSVGNASIDGTINKADL GTFLSNEAGSDIQDVQVDISKDNISLTGKMNVGMVFKGDVKLDGNLELKGNTLLFSPKKF TINGATIPGMTSNVLESTQIYDFNNFPIPVKAESLTVDNGEILIKVKPVLN >gi|292596546|gb|ADCV01000002.1| GENE 148 156103 - 158145 1711 680 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0803 NR:ns ## KEGG: Vpar_0803 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 680 1 680 680 1298 99.0 0 MNHRNAQKSKYSWILILCIIIGLLSSLYLVFERHQIEKSQNHIENIVDYDAVLRASAFEK RSQQEAFDALHNAGVTAFAIYDRTLEKAKDAGQVKVLSSEEMDSVRVNGAAIKPGATYVA LISGKEGYYKEIREDLYHRIGKDKVKELNTSIGPVLELYGATADSYAKMNLGISKLQAQE VVDRGFNVIVRPTNYRNVTSEDIQYVFKRLEGIPHVTGMIFAGKEALGAPNLTDETLALL NKNHIPLVGIEAVNQLQYEPQQGFLEMAAKNNYSVGRVYTIAKEELKKITPEEAAQRFYI SDIERNIRFNLFPMYETGINNETVLQTTINYINIATEKLAVKGYEFGPADIYPAYTPNPL LVVITMIGAIALFVYVLQMMLPMSKHTQLVAFFGISLASIVVFILTSGTLITQIWALSSA IMAPVGAMIRLMEEWRRYDGARPLGAIKSTILALLYLVIAALFAAIGGMYIASLLGNTKF FMEFALFRGVKLTFVLPIILVIIAYLQRFPLWNGRVINSKEEAKTFVVEFLTMDVKLYVF FIIAALGGAVWVFVGRSGHTAGVPVPGFELMLRRFLENTMYARPREKEFIIGHPALMLAT FAFMRKWPTVIHFLLTLAGVIGIASMVETFCHLRTPVFMSIMRGYDGLLIGALFGVLLII AVRFMMYVTQWFQAREVDHE >gi|292596546|gb|ADCV01000002.1| GENE 149 158138 - 159238 1095 366 aa, chain + ## HITS:1 COG:alr4509 KEGG:ns NR:ns ## COG: alr4509 COG2327 # Protein_GI_number: 17232001 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 5 305 4 287 349 140 31.0 3e-33 MSNIVISGYYGFGNAGDEAMLCAIIDAIRKEEADAHITVISGNPKETSKKHNINAVGTFS ALGILKSIANSDLVISGGGSLLQDATSIRNTYYYISIMALAKLLGKKVMLYSQGIGPLNR SSTRRAVGFVLRFVDTITVRDSISKDELVSLGIDDVEVTADAVLAMQPADLSIGSHILKG YISKISEADEQRKRIGVAVRSWKEDTEYRESLANVLSRLQEQDNVEIIFIPMSHPEDTKE AKIIASYMPNGAIVLEGPFSTEQQVSLSGNVDLMIGIRLHALVFSSLMGKPVIGISYDPK ITSFLHMIGQEPIGTMTHLREEALYQWCHKLLNSREEYQASYDRIESLRVDSQRNAEIAI SLLKDY >gi|292596546|gb|ADCV01000002.1| GENE 150 159272 - 160108 1182 278 aa, chain + ## HITS:1 COG:FN0294 KEGG:ns NR:ns ## COG: FN0294 COG3959 # Protein_GI_number: 19703639 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Fusobacterium nucleatum # 11 266 6 261 270 313 58.0 3e-85 MATLTQDVKQLVQEKAKAIRVGIVQSVTAAKSGHPGGSLSIADVMALLYYVEMNVDPANP KAPNRDRFVLSKGHAAPALYATLAEKGYFPKEELLNLRKINHMLQGHPDMKHTPGVDMST GSLGQGISAACGMALAGKIDNADYRVYSILGDGELEEGQVWEAAMFAGFYKLNNLTAFVD FNGLQIDGDITKVLSPLPIPEKFKAFNWNVIEVNGHDLDELHNAIETAKAFTEGPTCIIM HTVKGKGVEEMEGQAGWHGKAPSEEQGVAFVNEIMGVQ >gi|292596546|gb|ADCV01000002.1| GENE 151 160108 - 161040 1258 310 aa, chain + ## HITS:1 COG:FN0295 KEGG:ns NR:ns ## COG: FN0295 COG3958 # Protein_GI_number: 19703640 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Fusobacterium nucleatum # 3 304 4 305 309 328 55.0 8e-90 MGKATREAYGNALARIGKENTNIIVLDADLSKSTKTDTFKAVCPERFFNVGIAEQNLISV GAGLAAAGKIPFVSSFSMFATGRAFEQIRNAVCYPKLNVKVCATHAGITVGEDGATHQSL EDISCMRTLPNMTVVVPADERETEAVIEWAASYNGPVYVRLGRAGVDDVTTEGYSFVPGK STILVDGSDVTIIACGALVGPAVEASKTLSESNISARVINMASIKPIDAEAIIKAAAETG AIVTAEEHNIIGGLGSAVSEVVVSNKPVPMEFVGVQDTFGESGTPKELMAKYGLTANDIV EAVKRVIARK >gi|292596546|gb|ADCV01000002.1| GENE 152 161055 - 161741 348 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 215 4 219 223 138 36 2e-31 MIEFKNVSKVYDNGSVALDDVCLTINDGEFVLVCGHSGAGKSTLFKLLTHEVVPDAGTVI VDDFDVTRMKRSKIPKLRRKLGVVFQDFRLLPNKTVAENIAFALEVIEEKPKIIKEKVSH VLDLVGLSEKANDLPEDLSGGEQQRVAIARAIVNRPTVLIADEPTGNLDPDTSKDIVELF KHINNFGTTVIMVTHNMDLVSYLNKRVIRLKDGRVQSDNMRGAEINEA >gi|292596546|gb|ADCV01000002.1| GENE 153 161779 - 162618 1007 279 aa, chain + ## HITS:1 COG:BH3601 KEGG:ns NR:ns ## COG: BH3601 COG2177 # Protein_GI_number: 15616163 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Bacillus halodurans # 1 279 17 298 298 185 37.0 8e-47 MKRNGLMTLASISTVALSLFMLGVFLCGVINLNNMASSLENQVQLSIYLKDGLTTDQIMA VGKQIKAIPNLKHLEFVNKEQAMKEFKERLGDQQQLVNALGDVNPLPNSYVLTFDNPSDV KATAKLATTFQGVESTHYGQDIVEELFRITQVIRIGGIVLIAFLAAATLFIISNTIRLTV FARRKEIAIMKYVGATNGFIRWPFLIEGMLLGLIGAIIAVLCVGEFYHFITMEVSESLAF FPLVPMFPFFYDVALYILGGGIVVGAIGSTISLKQYMKV >gi|292596546|gb|ADCV01000002.1| GENE 154 162624 - 163805 1541 393 aa, chain + ## HITS:1 COG:TM0409 KEGG:ns NR:ns ## COG: TM0409 COG0739 # Protein_GI_number: 15643175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Thermotoga maritima # 272 393 134 254 271 130 50.0 6e-30 MNNSIFKSRFVAAILTGIVVLGTPLYIVAEDEDLTNQLDSIQQQVNQQNAKKADAETVIV SVSEQLRQIEEQLRQAQQQLDSIQQQRIAVENDITVNEKLLAEAQKRLEGREAVFYKRVR DIYINGRLSYLDVVIGSKDFTDFANRLEILKRIIDSDIKLIEEIKKERAEIAARKQALEQ SRAKLVELEKAAAAKRAEIEQKKKEREVVLQKAQNDRATAMQAVEELNASSAQITALLKA RQAERAAARAAAAAQQSSPTYSWVQGSGQLGWPVSGEITSPYGYRTHPIWGTTIYHSGID IGVDEGTPVHAADGGTVAWSGWMGGYGYAVVIDHGNGMSTLYGHNSELAVSEGQDVGKGQ VIAYAGSTGNSTGPHVHFEVRISGDPVDPMGYL >gi|292596546|gb|ADCV01000002.1| GENE 155 163807 - 164946 1054 379 aa, chain + ## HITS:1 COG:FN1205 KEGG:ns NR:ns ## COG: FN1205 COG0793 # Protein_GI_number: 19704540 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Fusobacterium nucleatum # 53 354 60 365 427 260 45.0 4e-69 MKFDTRTVLWSLLKYIGSGIVIMWLTFWYLSGSFWGLPRLFIAYYTASQVFMTPMAKTTL YDGMLKGLIDSLGEPHSVYLNAEEYKSMKMQTSATYAGVGMVLGTDDKGLYAVSVMEDQP AFKAGIKPGDHIIAIDGQSTTEIPVEEASSRIRGEAGTTVSLDIERNGEKLHFDITRESI VLPTVKSKMLTSTVGYIRISQFAENTAEDFATQYKELQSQGMKALVLDLRDNPGGLLSTT EKISNYIMPPGTLVTVQNRSGKKDTYKSDGPDVAMPLVVLVNKGSASASEIIAGAVQDRK LGTIVGTNTYGKGTVQTIFPSLDDEGIKVTIAKYHTPSDRVIDGTGIKPDVEIDLPKGVH PSSTLDDIQIKKALELLQQ >gi|292596546|gb|ADCV01000002.1| GENE 156 164964 - 166235 1568 423 aa, chain + ## HITS:1 COG:lin1572 KEGG:ns NR:ns ## COG: lin1572 COG0536 # Protein_GI_number: 16800640 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Listeria innocua # 1 423 1 429 429 396 52.0 1e-110 MFIDRARVFVKAGDGGDGMSSFRREKYVPNGGPSGGDGGKGADVVFKADKNINTLVDFRY KRQFKAPAGGNGESSNKHGRGSDPLIIPVPLGTVIKDEETGKIFCDLVNDGDTFVIAKGG RGGRGNARFQTSANRAPTFAEKGEPGEEFWLQLELKVLADVGLLGYPSVGKSSILRKVSK AQPEVAAYHFTTLTPVLGVVTISGDRSFVLADIPGLIEGASEGVGLGHNFLRHVERTNIL IHVLDVSGMEGRDPKVDFDAINEELRKYSEKLANKKQIVALNKIDMVFDDTTIPETKKYF EDKGYEVFLINALSGEGLSELMERAYYYVENYEPEPEANDDTVVYEAKQDVEFVITRGDD AAFYITGKRIERLVAMTNLDDDQSLRRFQRIWRFMELDAKLKEKGCKDGDEVVIGDQRFT FQE >gi|292596546|gb|ADCV01000002.1| GENE 157 166244 - 166528 176 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|55821596|ref|YP_140038.1| hypothetical protein stu1620 [Streptococcus thermophilus LMG 18311] # 1 93 3 98 105 72 45 2e-11 MTGKQKRYLRSLAATIPPVVQIGKNGLEDSVIDSARAAITARELIKVKLHNNSPEDKTIF QDLADMLGAELVQVIGFNGVLYKAKKEPKIILPK >gi|292596546|gb|ADCV01000002.1| GENE 158 166600 - 167721 1263 373 aa, chain + ## HITS:1 COG:DR1827 KEGG:ns NR:ns ## COG: DR1827 COG0263 # Protein_GI_number: 15806827 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Deinococcus radiodurans # 10 372 2 363 363 319 47.0 5e-87 MRSAIVNAKRIVVKVGSSTLCYTNGHLNLERIERLVRQLSDLANQGKEIILVSSGATGAG LAPLGFKEKPRDLVLKQAAAAVGQGILIHMYERMFREYGRTVGQILLTKEDSTGRHSYLN LRNTLHTLLQLNVIPIINENDVVAIEEFKIGDNDTLSATVAGIVDADLLIILSDIEGLYT ANPATNPDATLIETVSEINDETYAIAGGAGSNMGTGGMYTKIKAAHMATNSGVPMVITSG EVEDSVRRVCKGEQIGTLFEAHDASLSGKHHWLAFGKRLKGSITIDDGCARAVLDKGASI LPAGIIEVEGTFGPGDTISIYHDHKEIGRGLINYSIDDMKAIKGHNTNDIAEILGINTTY DEAVHRNNLVLLH >gi|292596546|gb|ADCV01000002.1| GENE 159 167731 - 168990 1328 419 aa, chain + ## HITS:1 COG:CAC3254 KEGG:ns NR:ns ## COG: CAC3254 COG0014 # Protein_GI_number: 15896499 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Clostridium acetobutylicum # 10 418 9 417 418 411 48.0 1e-114 MNQYEKICKDMGQRAKTASFELAQLDQETLDSALLAIADAVEAQTDEIMADNELDLEKSV DYNLPRTMIDRLTLTPSRIALMAEGVRQVAALESPVGSIIETITRPNGLIIEKRSVPFGV IGIIFEARPNVTIDAGVLCLKTANATILRGGKEAFHTNQIIVSIMRNTLESLGINGDSIQ LVEVLDRDLVGVLLQQREYIDVIIPRGGAGLIRRVVEDSSIPVIETGSGVCHTFVDEFAD LEMALEIAVNAKVQRPSVCNSMETLLVHQAVAREFLPRLNIALLEYGVRIHGDEAVAQYM ENTIPLTEESFSTEYNDMDLNVRIVENLEEAIDHVNRYTTHHSEAIITDEPMRANVFMNL VDCSTVYHNASTRFTDGFEFGFGAEIGISTQKLHARGPMGLQALTSYKYFVFGEGQVRT >gi|292596546|gb|ADCV01000002.1| GENE 160 169130 - 169744 669 204 aa, chain + ## HITS:1 COG:BS_yqeJ KEGG:ns NR:ns ## COG: BS_yqeJ COG1057 # Protein_GI_number: 16079618 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Bacillus subtilis # 5 201 2 187 189 155 40.0 4e-38 MVDKRRIGIIGGTFNPIHLGHLMIAEVACESFNLEKVIFVPARIPPHKQHDVIDSHHRYA MTAAAVSDNPNFEISDVEMRREGPSYTVDTIQYFKKLYGPTVEFYFIAGTDTIRALPTWK FIDELIDEVHFIGATRPDGSSAIDSTLDELGSKAREKIHVMEVPEMKLSATYLRERLRSG KTVRYMLPKCVVDYIEENHIYGKE >gi|292596546|gb|ADCV01000002.1| GENE 161 169748 - 170317 584 189 aa, chain + ## HITS:1 COG:CAC1263 KEGG:ns NR:ns ## COG: CAC1263 COG1713 # Protein_GI_number: 15894545 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Clostridium acetobutylicum # 1 182 1 182 189 173 48.0 2e-43 MLSFDEIQHRVSQWMGKKRFKHTLGVVESATQLAKLYNVDVEKARLAALLHDCAKEMPLK EMQDLVKENNYKADEELLANGNLLHGLAGMIRAKLEFSITDSEILEAIRVHTTGKVGMSK LDKVIFLADYIEPNRDFPGVDELRNVAKKDLNKAVLLGFDNTINHLIEQHLSIYPLTILG RNDVLKSCK >gi|292596546|gb|ADCV01000002.1| GENE 162 170330 - 171451 1007 373 aa, chain + ## HITS:1 COG:sll1872 KEGG:ns NR:ns ## COG: sll1872 COG1316 # Protein_GI_number: 16330814 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 11 332 17 358 463 87 22.0 3e-17 MDERERARARRRRKRRQQKSSVKWPRVILAIVVVFTLLGGIGYGIYSGVSYAYRAIVGTT EATEAVTDSGNKQDANTVSVEQKGLDKPLYILVIGTDDNNPSQGDSLFLLSVNLDQKTMD VIGIPSNSKIDNRDQTDATMLNSIYEKGGIELTKAVIEDMFHISIPYYVVVNQTAFKKTN DVLGNQQIYVEQPMEHIDAEGNIDIDLRRGYQTLDSNNALAYLRYSDPKHDTFTRVQRQE RFLKLWVEQEHNAFFLTNAWHIWRIWDHYDSNISTLDAIKLVYNASKINKEEIHFYILPG EKELIGETTYWKVNPTEAQRLVGITMGNLPANEMTQFISAPTNSTSKVAPESEHNGGTIT KPTEPGEESGSKR >gi|292596546|gb|ADCV01000002.1| GENE 163 171468 - 171830 496 120 aa, chain + ## HITS:1 COG:BH1328 KEGG:ns NR:ns ## COG: BH1328 COG0799 # Protein_GI_number: 15613891 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Bacillus halodurans # 9 120 4 115 117 97 46.0 5e-21 MKKKEDIKQIVLELAQAAFDKKGRDIEILDLEGISMLGDYFLIVSANNSKQSQSIADEME DKAAELGITVQHREGYREGEWILLDFGDIICHVFGGDELREFYSLEELWNDAGRVPFEGV >gi|292596546|gb|ADCV01000002.1| GENE 164 171832 - 172740 498 302 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 31 283 22 279 285 196 38 8e-49 MATELLENTIATLKVLRTSDQGAFLDGQTGNTNDDILLHKDQQIAPVAIGDEVEVFLYRD PKGRLTASMRLPAMKVGQIGYVEVINTTNFGCFVEVGTERGIFMPHAEMRGRPQVGEKVW VRLYTDKSGRLAVSMNVDDEMRRASKAATEAMVGQLVKGAIYNLTSEGAFFITPERWIAF LHRSEMTRKLKVGEMIEGRITFKRDDGRVNVSMRPTKEKALVSDGDIIMGYLLNRGGKMP YSDESSAMLIKDKFNISKAAFKRALGHLMKEKKIVQEEGWTLLTDIGRQWTPPVNNESQD EE >gi|292596546|gb|ADCV01000002.1| GENE 165 172746 - 174086 1259 446 aa, chain + ## HITS:1 COG:MA1480 KEGG:ns NR:ns ## COG: MA1480 COG0569 # Protein_GI_number: 20090339 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Methanosarcina acetivorans str.C2A # 1 445 1 447 448 281 36.0 3e-75 MKIVIVGAGKVGYSLAQRLIQDDHDVYVIDRSPERIHNLENTLDVSLVLGNGSDVQLLNE IDMSDVGMFIAVTDSDEVNMLSCSVAKIKGVPTTIARVRDNSVAEHMDEEIRAQLGVDLF INPEMVTAQELLRILETPSAIDVEEFGQGAVRLMEFKLNNEFPLLGQPLKEIRFPEGVLL VGILRYGEMIIPHGESRLQADDSVFFLGLKESVSEVENLWFHNYNTFYKRAVIIGAGLLG RNLTVLLEKAGFSVKVIEKDFDRCENLANQVDKAMVINGDGTDFDLLEAEEIADSDVIIA LTDDDKLNLLVALVGKHMGIPKTVVRVGRPEYIMLMEQVGIDVVFSPRLLTASQILRFVR SGEGVVSISTFEGGKAESIEIEITNESPVAGKQLKDIRLPGKALVGVILRENEAIVPRGN TQILDGDHIVLFTLPESVSKLLKYLT >gi|292596546|gb|ADCV01000002.1| GENE 166 174099 - 175586 1118 495 aa, chain + ## HITS:1 COG:MA1481 KEGG:ns NR:ns ## COG: MA1481 COG0168 # Protein_GI_number: 20090340 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Methanosarcina acetivorans str.C2A # 1 479 1 474 476 246 33.0 1e-64 MRIQIVMSLVGRLLYIFGVFTLIPFIYSVVFETAYWSFLITTSLSLVLGTLLSYYGCESQ SFSIRDGFLVVSSTWIFTVILGALPFLGSGILTNVFDALFEATSGITATGATIIYSVDEL PHTFVLWRGLMHWVGGMGIIVLILSFLKNLGADAAHFFNAEASVPKPGVVMPRIQSMATK LWQLYIAFTALCFLMLWAGGIEPFDALNYAFSIIATGGFAPTSAGAFIYEQSNYICFVFI FFMFLAGGNFSVYYNAIQKGIRVLINDFETRMYWLVVFIGIAIVSISLALQSIYSSPLEI VRNAAFNLVSLQTGSGFAISDYDLWPAAAQMMLFICTFFGGCSGSTTGGVKIIRLIILIK SSIIYLRKSIHPDMVQVVRINGKPMPTKWIQMTHQFLFLYLMIYVVSVFLMTCTGLNTYD SMQVVTAFLSNVGLGFGGFGPTDSFSVMPNTAKCIAIVDMLLGRLELFTILVMLHPQFWE GYFIKKEVPKRYRIL >gi|292596546|gb|ADCV01000002.1| GENE 167 175602 - 176198 602 198 aa, chain + ## HITS:1 COG:lin2270 KEGG:ns NR:ns ## COG: lin2270 COG0491 # Protein_GI_number: 16801334 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Listeria innocua # 1 191 1 199 205 115 35.0 5e-26 MEVIKRPLGLYKANCYVLIKEGKSIIIDPGFHCNHIIDMVADSEPIAVLLTHGHCDHVSA LDEVCTHYNIPAYLHPLDQELLQLIRRRPSVYKKKMYTHCNDLVEGQLNLDPFDIVVHHT PGHSAGSVCLEIEGYLFTGDTLFKQNVGNTDNYKSDPADLIKSLKYLLTLSKDLIVEPGH RESTILKNEEEFIKNIVV >gi|292596546|gb|ADCV01000002.1| GENE 168 176782 - 177237 329 151 aa, chain + ## HITS:1 COG:CAC2339 KEGG:ns NR:ns ## COG: CAC2339 COG1683 # Protein_GI_number: 15895606 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 3 141 2 150 150 115 39.0 3e-26 MNKKPKLLISECLFGVPCRYDGKDNYIETIEALKEYYELVPVCPEVLGGLSTPRDPAERQ GERICTVNGADVTDEFVRGAQLTVDIALKYGCKQALMKAKSPSCGYKRIYDGTFTRTMKN GHGCTVEALLEKNITIYTENDIELLLAEKKR >gi|292596546|gb|ADCV01000002.1| GENE 169 177332 - 179164 1269 610 aa, chain - ## HITS:1 COG:ZyijP KEGG:ns NR:ns ## COG: ZyijP COG2194 # Protein_GI_number: 15804551 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Escherichia coli O157:H7 EDL933 # 128 588 63 549 577 126 24.0 1e-28 MSSSVRQIGRNPIFRFGIIGIVLYIILFLIYEPITLGLDVEDITILAVPTIVGTFLFQYF MGCTVFHRPFLGYGLVGILWALTFPLLFHWSYVKPLYFYEFANDFLFGLLIFMGLSGIQF LLNQTNRFHKTTSLIMAIISMILSLIPFLQIGYYMTTWHCLTPASLLAVYMTNPEEAFGF LKNAAGIPGLIAISIGLILWTYLLYWSNLGMKAVVNLNTTRPMRSAMLIASLVAFLVYVP FFLFPQTCIVANWIAAGDYVKQMQQYNDNHHLVFDSFNLDTKETAVNKTPGTIILVIGES SSRDYMKVYNPNFPYDDTPWQGNMRSDNKDFVFFDNAYSSYVQTVPTLERALSERNQYDD KPFLDSANILDIAKKAGYTTSWFSNQGVFGEYDTAISLMAKTADTTKWAHESYAFSDRYD EALLPLLETVDPTKNNFIVIHIMGSHIYYNDRYPHEFSKWKQGPYPDGQEAYANSQLYTD WLLQQIYNYGKDKLNLQAMVYFSDHGESLDKSHNPDTFDFVMTHIPFWVYLSPQYRSTYP QTAEVLAKHEHQFFTNDLLYDTLVGLMHAPSQRYDATRDFSNAQYRFNLHNLTTLLGEQP LANDPVNANK >gi|292596546|gb|ADCV01000002.1| GENE 170 179334 - 180059 637 241 aa, chain + ## HITS:1 COG:SA1326 KEGG:ns NR:ns ## COG: SA1326 COG1354 # Protein_GI_number: 15927076 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 4 232 10 243 251 125 35.0 5e-29 MGDYNYKLDVFEGPLDLLLHLIEKHKIEITDIPIVEITSQYLAYLDNWNHFDIHYSSEFL VMASTLLQIKSRMLLPKAEPEPDEAEDPRDELVAKLVEFKKIKDITSLLMERTAVSANIF SRPEETSVLGLDSVYNLELSQLYQIFYQTIKRAKELPEEETIREVKVEKDTYSLEDMIIS LSSRIHRGECLYFRELLVAIETKSGMVTIFMAVLELLKQQVMEMRYEDDDIIFTATLERA V >gi|292596546|gb|ADCV01000002.1| GENE 171 180072 - 180581 575 169 aa, chain + ## HITS:1 COG:CAC2060 KEGG:ns NR:ns ## COG: CAC2060 COG1386 # Protein_GI_number: 15895330 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Clostridium acetobutylicum # 8 160 24 178 202 103 38.0 1e-22 MSLPTMHLEAVLFSSAKPISIDMLAEVFGLSTEATQKYIEELQRELEEQNRGIRIRISGA GVELVSAVECADYVGHIRKREDKLSNAAMETLAVIAYKQPITKAEIEEVRGVNSDKIIKQ LLTRSLIAELGHKDTVGRPILYGTTDEFLRSAGVESIEALHQEVSETEG >gi|292596546|gb|ADCV01000002.1| GENE 172 180583 - 181311 826 242 aa, chain + ## HITS:1 COG:BH1576 KEGG:ns NR:ns ## COG: BH1576 COG1187 # Protein_GI_number: 15614139 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Bacillus halodurans # 1 241 1 240 242 231 54.0 1e-60 MERLQKYIASCGIASRRKAEELITEGKVQVNGRKVTELGVKINPQKDKVKVNGQLLAQEK PVYYLLNKPKGVITSVSDPQGRETVLDYIKNETKRIYPIGRLDLYTEGLLLLTNDGELAQ NLTHPSKGIEKTYEVRIKGRVRDDDLQIIANGVELEDGITAPATIVDLGFDDHNGVHEVE ITIHEGRNRQVRRMFEHFGYRIHNLKRIAYAGLTLGGVKRGASRQLTIREVKALKALGTD KA >gi|292596546|gb|ADCV01000002.1| GENE 173 181308 - 182555 1186 415 aa, chain + ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 14 406 1 388 393 370 48.0 1e-102 MKQIIVIGGGAAGLMAAVIAGREGARVILLEKMNMVGKKMGITGKGRCNITNSADMTEFI KNTPGNGKFLYGAYERFSNEDLLDLLHSWGLKTKVERGGRVFPESDSALEVRNIFMKILK KYNVQVHLNEPVTSITVQENRVVGVTTDKEQYACDAAIICTGGASYPLTGSTGDGYVLAE KVGHTITDIRPSLVPIVTNETWVKEIMGLSLRNVEVSVISKSKVQAKQFGEMMFTHFGLT GPTILSLSHTVGKLLRKKNPQITIEINLKPALTAEVLDKRLQKDFDLYSKKQLSNGMKDL LPVNLIPIVIKLAELNPAKPINQITKEERLRLCHVLQHMTVTVKELRPVAEAIVTAGGIS LKEFNPKTMESKLISGLYGAGEVLDIDAFTGGYNLQAAFSTGYVAAMHAVHGDEE >gi|292596546|gb|ADCV01000002.1| GENE 174 182564 - 183247 255 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 6 211 35 274 863 102 30 1e-20 MNTKKIAIAIDGPAGAGKSSISKVVANELEYLYIDTGSMYRGVTWAVLDSQIDVKDQAAV EALLPSLNLTLEPTATACKVYIKGKDVTSLIRQQQINDNVSTIASYKGVRQYLVERQQEM AAVGGVILDGRDIGSVVLPNAELKIYLTASVDARAKRRWLEVQGTSNEQTLDEIKKNVVS RDEMDKNREESPLVCVEDAVVVDSSNMNFDETVAYILNLVQETINHE >gi|292596546|gb|ADCV01000002.1| GENE 175 183240 - 183860 649 206 aa, chain + ## HITS:1 COG:BH1635 KEGG:ns NR:ns ## COG: BH1635 COG0204 # Protein_GI_number: 15614198 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Bacillus halodurans # 7 191 9 188 195 136 39.0 3e-32 MNKFSTWLWRTAFWLRYKVGYGLKVYGRDNFPMEGPVIVVPNHLSNNDPPICGYALPRHV HFMAKQELFVNPISRFFCTWLGAFPLNRGAIDKVAIRHAMGLLKDNKVLGIFAEGNRQKS GKLGKFHDGAASIALRTGVSIVPVAIIGSHNMERNKVACIIGKPIPVEKAKATPEAIQKV NDSVKSEIQRMIDSYHNNCIEETLWK >gi|292596546|gb|ADCV01000002.1| GENE 176 183851 - 185749 3158 632 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 632 1 632 632 1221 99 0.0 MEIILAENHGFCYGVKRAVEMANEAANSDGKSYTLGPIIHNPQVVGRLEDKGVSPVQEVS DIAEGTMIIRSHGVGPAIYEEAEEKGLHVVDATCPHVKKAQQDAKSVIDDGMTLVILGEK NHPEVKSINLWANNEGIIIEDEESAQKLQVVEKMGVVVQTTFSQFKFNSIIDILEKKSKN LKVFKTICNATQERQNSAVDLARNVDLMIVIGGKNSGNTNRLAEVCRDVGCTTYHIETST ELQLEWFNRVQTVGVTAGASTPDWIIKEVIETMKDFAELLAAEGQEEFKKGNVVEGTVVQ VEDERAYVSFGYKTEAILNRTEISYPAPESAKDVLKNGDEIKAVIMNHIKEDNPIYLSMT RLAKDEDWQYVIEAQEKDEAIVCKGIDAIPAGLVVTVKSLRGFIPLSQGDVHFVKSLDNL VGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKNINVGENYKGIVRKIMPYGA FVDIGGIEGLLHISDISWQKIKKVEDVLSVGQEIEVKLQSFDAESNKLSLSLKALSKSPW DVAEETLHVGDVIKGKVVRLVAYGAFVAVNDDIQGLLHISQITKQRNAKVEDYLNRGQEV EVKIISLNKDEKKLGLALTELMESKETAEDAE >gi|292596546|gb|ADCV01000002.1| GENE 177 185863 - 187197 1504 444 aa, chain + ## HITS:1 COG:BH1638 KEGG:ns NR:ns ## COG: BH1638 COG1160 # Protein_GI_number: 15614201 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus halodurans # 1 438 1 435 437 518 58.0 1e-146 MAKPLVAVVGRPNVGKSTLFNAIVNKRISIVEDIPGVTRDRIYFDAEWLNREFTMIDTGG IEFITDNSHVIPKMMRLQAELAIEEADVILFVVDGKQGIVPADEEVANILRASGKPVVLV VNKIDSVNQEPNIYEFYNLGLGDPIGISAKNLMNLGDLLDDTVKHFPPVGTNVDDEDTIH VAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHENQKFVLIDTAGMRRKS KIEEAVERYSIVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKGVVIVVNKWD LVEKDDKTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRLADMLKFVSEQQYRRVSTG TLNQLLQDAQTVNPVPSRNGRIPKIYYMTQASVKPPTFILFVNEPELIHFSYMRFLENRL RESFGFEGTPIRLVLRGKKRDDED >gi|292596546|gb|ADCV01000002.1| GENE 178 187197 - 187793 679 198 aa, chain + ## HITS:1 COG:FN0537 KEGG:ns NR:ns ## COG: FN0537 COG0344 # Protein_GI_number: 19703872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 8 191 6 191 194 142 45.0 4e-34 MDIMIIVYAVLSYLIGSIPSGLIIGKFFFNTDVRQYGSKNIGATNTYRVIGLKAALPVFL CDALKGAVGVVLLSPYGPMFMILGGILGMMGHNWSVFLGFKGGRGVATGLGVLIALSPIV ALICFLVWGVIVYFTKLVSLGSIIAAALVPVLMYFTGESFWFVGFGGLAALFVIVRHWDN IKRLLAGNELKVERIKKD >gi|292596546|gb|ADCV01000002.1| GENE 179 187797 - 188795 1280 332 aa, chain + ## HITS:1 COG:FN0906 KEGG:ns NR:ns ## COG: FN0906 COG0240 # Protein_GI_number: 19704241 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 331 2 332 335 266 41.0 5e-71 MNVVVIGSGSWGTALAIKSVLAGNTTTIYCRRPEFADKLAKDLENKDYLPGVKLPEELQY SSDLEACISNAEVVLMVTPSVHVRTSLEAIKPYAHKNQAYILCSKGVERTSGKLLTTVMK EVLATIGCNLAVLSGPNHAEEVGRNLPAASVLSTESLEVATTLQKALCSQNFRIYANTDM IGVELAGATKNIIALAAGIADGLALGDNCKALLLTRGLHEMTRFGVALGAQKETYAGLAG MGDLIATCMSPHGRNRAAGQKLAEGKTMDFIVNHTNMVVEGFFATEIIYTMACKHQIEMP ITKALYEVLYEKKSPSIALAELMGRDIKIEVS >gi|292596546|gb|ADCV01000002.1| GENE 180 188863 - 189414 258 183 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 150 13 165 199 103 37 6e-21 MRIIGGTAKGHAIKAPKGLDTRPTLDRVRESVFNVLANRGIFGSDILDIFSGTGAVAIEA LSRGAAHAVAVDFKTGKLILENAKHCRVDDRLEIIPRKLSQLKNYIVGRQFDYIFSDPPY ENGFIQDTIDLVVNYDLLKPEGVLLLEHHKDEVFTLPESWECIKEQKFGYTLVSYFVKTA ERS >gi|292596546|gb|ADCV01000002.1| GENE 181 189419 - 189910 383 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 2 158 4 160 164 152 47 2e-35 MRIGVCPGSFDPVTNGHVDIFERGSRLVDKLIIAVSSNPNKNSLFSMEERVEMIRNSVKH IPNVEIDCTGGLLNEYVKSKNATIIIRGLRALSDFEYEFQRALFAKYLDDDIETVFIMTN NKYSFVSSTGIRELAKFGGKLDGLVPDDVKEKLEERFNTVHNK >gi|292596546|gb|ADCV01000002.1| GENE 182 189922 - 190389 831 155 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0837 NR:ns ## KEGG: Vpar_0837 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 155 1 155 155 174 100.0 6e-43 MKTEKLLEDLEVLIESSSRIPMTTKRMVEEDEIMRIIDSIQESLPLELEESRRIVADKDK VLADAQRQAETLIDQAKDYIAKLTAESELVKQAQEQANQIINAANQSSDELKASSIQYAG DVLKYVENNLEKTLESLRQNRESLKQTEQRTEENQ >gi|292596546|gb|ADCV01000002.1| GENE 183 190557 - 192272 1602 571 aa, chain - ## HITS:1 COG:BS_yloA KEGG:ns NR:ns ## COG: BS_yloA COG1293 # Protein_GI_number: 16078628 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Bacillus subtilis # 1 563 3 561 572 282 32.0 1e-75 MNLDGLTMSVLAKELNERLQTGQIQKLYQIDKTTLLFKVRALNEDQNLIITVGATPAMYL SQPLQDLPKEPSSLCMFLRKHIEGSRIVKVEQINGDRIMCIQTDKLEMDGSITSTYIYIE LMGKYSNCIFVQDGIILESLIHVSPLMNRERIISPKLQYDLPPNANRVSLMDFDNNEIKN LLTSFGNGSVQQSIRAIFNGFGKPLLDELLYISKLSGEEIITDLDTSQLDTLAKALYNLK VKLENSKGLFTLVNDNNKKAYASILLHNYKVLKEYNTISEALEESIHNTKAIHTADKELE KILTAAIKKEEGRHQKIKDELEDTKKMETYKLYGDLLMINAHLQVQYEPSIELQNLLSEE NEMLTIPLKPNLTIVENAQWYYKLYTKLKNRMVSGEFQLNASTTKLAYLQSILYSISLAT TRESLEEIRKECMDAGIIKKSKKPLSYKLGKSNYIHLTIDEGEIFIGRNNQQNEYLTHRF AKPTDIWFHTQDIQGSHLILRLNVEPDDMILSKVAQYAAYFSKARDTSKVPVDYTYIKNI KKPPGSPLGFVIFNTHQTMIVEPKKPENYNE >gi|292596546|gb|ADCV01000002.1| GENE 184 192400 - 193281 822 293 aa, chain + ## HITS:1 COG:BH2514 KEGG:ns NR:ns ## COG: BH2514 COG1561 # Protein_GI_number: 15615077 # Func_class: S Function unknown # Function: Uncharacterized stress-induced protein # Organism: Bacillus halodurans # 1 293 2 294 294 171 34.0 1e-42 MKSMTGFGSGTATKDGITCTVEIKSVNARFLDLFIRSPKQMNPFESTIRGMIQDRITRGK VEVSVSILDTGERPKTFTINSVLRKQIQELLVQEEFYDDSKKVPLQAVNSISTEWVQQQD TPIGEDVLSDIVKEATTQALDALIAMRTAEGQHIKQDLLDRIDTLEMIITKIDTNKSGAV EAYREHIKTKIQEYLVSLEASISEDRFIQEIALLADKTDITEEIVRFTSHVVQLKNTLAD TNSIGRKVDFILQEMNREVNTIGSKAMDSIITELVVQLKCELEKIREQVQNVE >gi|292596546|gb|ADCV01000002.1| GENE 185 193296 - 193565 469 89 aa, chain + ## HITS:1 COG:BS_yloBa KEGG:ns NR:ns ## COG: BS_yloBa COG2052 # Protein_GI_number: 18677778 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 77 1 77 89 117 76.0 6e-27 MSIQLLNIGFGNMVSANRVMAIISPESAPIKRMVQDARDKGLLIDATYGRKTRAVLVMDS GQIVLSAIQPETVAHRLVQHDVDVDTVES >gi|292596546|gb|ADCV01000002.1| GENE 186 193574 - 194203 713 209 aa, chain + ## HITS:1 COG:BH2512 KEGG:ns NR:ns ## COG: BH2512 COG0194 # Protein_GI_number: 15615075 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Bacillus halodurans # 3 195 4 196 204 207 49.0 2e-53 MSDRGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGEKEGINYFFRSKEE FESLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFI YIVPPSLSELSERLHNRGTDAKEVIDKRLSLACSELALAHRYDYIVVNDDLAEASEKVAS ILRAESCKISRNKEQIQYIYKQYQESKEK >gi|292596546|gb|ADCV01000002.1| GENE 187 194208 - 194423 346 71 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0842 NR:ns ## KEGG: Vpar_0842 # Name: not_defined # Def: DNA-directed RNA polymerase, omega subunit # Organism: V.parvula # Pathway: Purine metabolism [PATH:vpr00230]; Pyrimidine metabolism [PATH:vpr00240]; Metabolic pathways [PATH:vpr01100]; RNA polymerase [PATH:vpr03020] # 1 71 1 71 71 117 100.0 9e-26 MMVKPPLKKLESQVDSKYTLVTLAAKRARELTDGEPCLAESTHATDKPVSLAFYEIAEGE VTYKRTKEGIK >gi|292596546|gb|ADCV01000002.1| GENE 188 194476 - 195675 1306 399 aa, chain + ## HITS:1 COG:CAC1720 KEGG:ns NR:ns ## COG: CAC1720 COG0452 # Protein_GI_number: 15894997 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Clostridium acetobutylicum # 1 399 1 398 398 338 46.0 1e-92 MRGKHIIVAVSAGIAAYKAIEVVSRLRKKGAEVKVVMTQNATYIASPLTFGEISGHPVAL DMFEQVHQWDVEHIALATWADAYVVVPATANVIGKIYAGIADDMLTTTIMATTAPKYLCP AMNTEMYNNPITQRNLEGLRSLGYHIMDPAEGWLACGITGVGRLPEPEAIVDWLEAKMCS TNELEGTTILVTAGGTQESIDPVRYIGNRSSGKMGYAIAEQAAHMGAKVILVSAPTSLPI PSGVDFISVDSAVSMQEAVEARYNDVNVVIMAAAVSDFRVLHKAEQKIKKMESMTIELVK NPDILQGLGSKKSHQILVGFAAETEHVIKYGQDKVAKKNLDMLVANDVSKSNAGFNVDTN EGYFLYPDKEPKEMLNMKKSDLARHILREVIDLVANKHS >gi|292596546|gb|ADCV01000002.1| GENE 189 195727 - 197391 1487 554 aa, chain + ## HITS:1 COG:VCA0077 KEGG:ns NR:ns ## COG: VCA0077 COG0659 # Protein_GI_number: 15600848 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Vibrio cholerae # 1 542 1 543 553 547 58.0 1e-155 MFAIQKAYLEGSLGKGKWSNNIIAGLVVGVVALPLAMAFAIASGVTPQAGIYTAIIAGIF VSLFGGSPVQIAGPTGAFIVLLSSIVVNYGFEGLQIATMMAGIILVLMSVAKLGTVIRFI PTPVIMGFTAGIGVTIWVGQWPYFFGFPPLPYMAHFHEKLWAMIQSLPYSDLPTLGIALL SLSLLLVLPKIPYINKVPAPIVAMIVATVIQAIYQFPTVLTIGSAFGGIPQGLPEFSVPK LSFDKILSLIGPAFTIAMLGAIESLLSAVVADGMSGTKHESNTELFGQGLANIFAPLFGG IASTGAIARTATNIRQGGNSPVAGIVHAITLGAILLFLAPYAVYIPLASMAAILFVVAYN MSDVPRFIRMLILAPRPDQIILLLTFFLTIFTDLVVAVNVGVVLAVLQFMRKMVNTIDVH EASSAELSAQIRHEITIHPEIMVYTVEGPLFFGAISAFDRALNSIHKDPKYLIIRFVKVP FVDLTGLRILRGIIEELQKRGIEVLLSDVSYDIRREMYKSDFLDILGRHHMYRQFESALH KAEHDLALKEAREV >gi|292596546|gb|ADCV01000002.1| GENE 190 197586 - 198776 1606 396 aa, chain + ## HITS:1 COG:BH3300 KEGG:ns NR:ns ## COG: BH3300 COG0192 # Protein_GI_number: 15615862 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus halodurans # 7 394 9 399 399 586 74.0 1e-167 MAEKHMFFTSESVTEGHPDKIADQISDAVLDAIIEKDPTARVACETLVTTGLVHVVGEIS THTYVDIPRIVRDTIREIGYTRAKFGFDCDTCGVLVSIDEQSADIAMGVDEALESKDGNG EVLDKIGAGDQGMMFGYASNETPELMPLPISLAHRLSRRLTEVRKDGTLTYLRPDGKTQV TVEYVDGKPKRIDTIVISTQHSPEVTQEQIKADLKRYVIDAALPAEFVDENTKYFINPTG RFVIGGPHGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAA GLADKCEVQVAYAIGVAHPVSILVDTFGTGRIEETKIQELVKKHFDLRPAGIIEMLDLLK PHYRKTAAYGHFGRTDVDLPWERTDKAQILKEEAGL >gi|292596546|gb|ADCV01000002.1| GENE 191 198839 - 201022 1811 727 aa, chain + ## HITS:1 COG:BS_priA KEGG:ns NR:ns ## COG: BS_priA COG1198 # Protein_GI_number: 16078634 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus subtilis # 1 705 1 773 805 562 38.0 1e-160 MRVAQVIINRPAKQLHKPLSYLMPEKFGNVLPGTRVLIPLGHSREEGILIGYDELVEPPE FTLRNIVQVLDSEPWFTPEMMDTARRLNEYYLFSYGDALRLFTVNKTLKSYEAPKEEWLV VMPEFSVAQFSERKKKQRELAKYLLEVGGASKALLLAKGYSRMVIKQVSEAKGIVVEARF KATKTTFDELLTEEVNIPLTEAQQAVYGPIQDAMNSHEHKTFLLHGVTGSGKTQLYLRAT ARCISQDKTAIILVPEIILTDQIVKRFVETFGDEVVVFHSKLTVQQRNNNWERLRRKDSH IIIGARSAVFAPAEDIGLIVVDEEHDTSYKQEDMVRYHARNVALWRAEAHGCPVILGSAT PSVTSYYKAKQGEYHLLELPNRIFEQSMPKVTIVDMKEEILHGNYSVFSDAMSRLIQHTL DEHNQMIILLNRRGYNTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCEHHEPIPTV CPKCNSKRIKFFGSGTQKVEEELRRHFKSARIARLDQDVTKNKQLAEDILHDFGAHKYDI LLGTQMVSKGHDFKDVTAVGILTADSVLNIPVYTASERTFDLLTQTSGRAGRGEKPGSVV IQTYNPLNYAIIKSKAHDYIGFYNEEIQNRKALGYPPFREMIHMVVRHQDMKTLESIANR IVDDLESYKGNQDILINGPYEAPIKKVRDMYRLAIMIRGTDLTNLKEYIYNSWIFTQEGL LIDVDPV >gi|292596546|gb|ADCV01000002.1| GENE 192 201036 - 201524 689 162 aa, chain + ## HITS:1 COG:CAC1722 KEGG:ns NR:ns ## COG: CAC1722 COG0242 # Protein_GI_number: 15894999 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Clostridium acetobutylicum # 1 145 1 143 150 125 46.0 5e-29 MAVLDVVKAGHPVLKQVAEPVEHVNKKLRALIDDMAETMYKTEGVGLAAPQVAVAKRIIV VDDQSGSGLIALINPEITHAEGSQVGPEGCLSVPGYFGDVERFNKVTVKGIDPHNKKVTI KAEGFLARIFQHEIDHLEGHLFIEKATNLRLITDHPEEKEIV >gi|292596546|gb|ADCV01000002.1| GENE 193 201517 - 202527 828 336 aa, chain + ## HITS:1 COG:BS_fmt KEGG:ns NR:ns ## COG: BS_fmt COG0223 # Protein_GI_number: 16078636 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Bacillus subtilis # 8 333 3 311 317 268 43.0 1e-71 MSDNKQLRIVFMGTPDFSVPTLEALIQAGHSIVGVYCQPDKQKGRGKQVQMPPVKVAALE HDLPVYQPVTLRDEQVRAELEALQPDVVIVIAYGKILPPWLIRLPQYGCINVHASILPSY RGAAPIHYAILNGDSKTGVTIMHMDDGLDTGDIIDIVEIDILPGETTGQLFERIAVLGGE TIVPVLTRWVNGEIVATPQDDSMATHTTKITKEMGQIDWSKPANEIANLIRGLNPAPGCY TYLDGKRLKVWSGEVVPSDTTHCLIDVHGKHVPIAISATTVPGTIVSKIAGLGVFCGDGN IILLTEVQPENKKRISAIDFINGHQIKEGIVFGDSI >gi|292596546|gb|ADCV01000002.1| GENE 194 202511 - 203305 414 264 aa, chain + ## HITS:1 COG:FN1837 KEGG:ns NR:ns ## COG: FN1837 COG1852 # Protein_GI_number: 19705142 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 84 253 6 174 176 107 33.0 2e-23 MGTQYKQYETYPLYLILSTITCALLTAVLAFLMYILEPGLLQLHPFASIISSVVISILIA IIWILCLSLIVASTGIIRLHPIVLRLANQFIYGLFPLTLAIGKVRGVTKDQLRQSMIDLI NHLVMLDMYTVDPERILLLTPHCLQESSCVHKVTHDVYNCKQCGRCQVGNLLQVAKDYGC QFIVVTGGTLARMKVKEARPKAIVAIACERDLASGMADVFPIPVIGVLNERPNGPCCNTT VDSERVRAVVEQLIGRNSNDRGKD >gi|292596546|gb|ADCV01000002.1| GENE 195 203286 - 204641 1244 451 aa, chain + ## HITS:1 COG:alr0820 KEGG:ns NR:ns ## COG: alr0820 COG0144 # Protein_GI_number: 17228315 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Nostoc sp. PCC 7120 # 11 449 3 444 449 319 38.0 8e-87 MIEVKTNQQQNIRLLAVKALSEINRNGAYANIKLQEYLQKYHLSDLDRRFFTELVYGVIR RKNYLDAIIVHFAKRPLKKLSSMVVEILRLGIYQIIYMDKVPESAAVNESVKLAKKLTRG LSGFVNAVLRSVLRESDSISIGELAKSEAEEISFIYNQPLWLVNLWIKEMGKDKTVDLCS WFNEQPRLTARINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYIDGHQGHLEKAKPVLE GHITFMDKASMLVAHVVDPQPGELILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLE LINQNAERLGVSIISTKLQDGRYLPDNWKEQFDRVLVDAPCSGLGILQKKLDMRWRKTES LLIELPPLQLEILEKASEMVKVNGYLVYSTCTMNSGENEAVLNKFLAIHKNFIIDPVSYK GAPQAIDGMITTYPPRDHMDGFFMARMKRLS >gi|292596546|gb|ADCV01000002.1| GENE 196 204660 - 205706 935 348 aa, chain + ## HITS:1 COG:CAC1726 KEGG:ns NR:ns ## COG: CAC1726 COG0820 # Protein_GI_number: 15895003 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Clostridium acetobutylicum # 1 345 1 343 345 284 42.0 2e-76 MIELLGKSLEELQSIFKTHNIQKFRAKQLIDYIYHRYIFDFEDMTQFPKDLRQWLGDNCV ISLPTLITESIAPDGKTRKILVEMSDQSRVEAVLMEQHYGYSVCVSSQVGCAMGCVFCAS TQGGLYRDLTVAEIIGQVVIFGALTKEEIHSVVVMGAGEPLQNYDNVLQALQLLHDPMIC NISYRKMTISTCGWVPNIYKLADEGLPITLALSLHATNNEVRRSIMPVGARYELTEVLDA VKYYYNTTQRRVTFEYILIDSVNASIDDAHALGKICKDFPNCHVNLIPVNGNEHIELYKP SITNMNTFKDIVSSYGVSVTVRKEMGDAIQAACGQLKAAHGRKKENHE >gi|292596546|gb|ADCV01000002.1| GENE 197 205699 - 206400 683 233 aa, chain + ## HITS:1 COG:alr4516 KEGG:ns NR:ns ## COG: alr4516 COG0631 # Protein_GI_number: 17232008 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Nostoc sp. PCC 7120 # 3 230 4 236 240 145 39.0 7e-35 MNNFVGLSKIGLVRQRNEDRFFIDGHICAVTDGMGGYSGGEIASTYAVDEIKEYLSSLET IGQQDLCDAIIHANQRIVNRVACEERLAGMGTTAVVTAINGNQLYWASVGDSRLYVYRDG HLRQITTDHSMVQELLTAGEITKDEMLNHPQRNLLTRAVGVDEILEVDSGVESILPGDRI LLCTDGLSGYVSDDVIASALQSTDDDMLVIESLMEAVYEVGAGDNVTIVVGTI >gi|292596546|gb|ADCV01000002.1| GENE 198 206419 - 208353 2041 644 aa, chain + ## HITS:1 COG:BS_yloP_1 KEGG:ns NR:ns ## COG: BS_yloP_1 COG0515 # Protein_GI_number: 16078640 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Bacillus subtilis # 8 273 4 268 331 288 51.0 3e-77 MSTMNIKGILLDNRYRIVDKIGVGGMADVYLGEDTLLGRQVAIKVLHANFANDDEFVTRF KREAQAAGKLNHPNIVNMYDVGFDQNLHYIVMEYVDGETLKKYITRHGRLSIDEAVKFTI AIAEGLEHAHTMGIVHCDIKPHNVIITNTGRVKVTDFGIARAINATNTVMYTNSILGSAH YLSPEQASGKPVDGNTDIYSLGVVLYEMLTGRVPFEGETPIAVALKHVREKVEPPTRYNP SIPPLLEAVVMKALSKNPADRFDSISDMISDLRLSQGFTMGKTQRHEPYDFATQMIPAVD PEALEDLSTIQEERKDEGKKKSMLSKIASIPQKYIVLGAAVIFLVAFLGAFLSYGNFWSN TTVDVPNVVGKQVSVAKNILEDKHLRVSTSEVTNPDVPAGQVISQTPGAGEKVKEQRTIH LVVSKGVGDITVPDLTDLTVDQARQRLKDLGLVVGKITQQSVDGKKDGVIIAQSPSGDSK VSKGTTIDLVVNKAKAKKVKVPNLVGMTLKDARDTLSNIQLGVNQVSGSVEEKSVVIEQS IKAGDEIDEGSTLNLTTEFKDDKKKSDKKEGNSGNKTTGTIDVTVPAGSKNQELKIVVKD DEGSAVIYDDTNKPGDRVVKKVSGVGNVRIEVYLNGALVQETAL >gi|292596546|gb|ADCV01000002.1| GENE 199 208362 - 209225 676 287 aa, chain + ## HITS:1 COG:CAC1729 KEGG:ns NR:ns ## COG: CAC1729 COG1162 # Protein_GI_number: 15895006 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 2 284 1 285 288 228 39.0 1e-59 MITGIVVKNMNGYFYVQDDTGTIHECKVRGRLKQGRYSLLVGDRVTISEDGFVESIHERH NSMVRPAVANIDQVVLVVAAHEPDINELLLNKMLVMIEHADIPIVLCINKCDLMDSETKA MVDLYKSIGYEVLMTSTYNMTGIDDLRHVLQHKVTAFAGPSGVGKSSLLNAVDPKFAFQT GEVSDKIKRGKHTTRHASLYSLDADSFIMDTPGFSAIEFNDVSLERLPTLFPEFGEYVDT CKFNPCYHEHEPICGIKAALEAGHIHQGRYDAYMSIRNDIESQRKRF >gi|292596546|gb|ADCV01000002.1| GENE 200 209227 - 209877 621 216 aa, chain + ## HITS:1 COG:BS_yloR KEGG:ns NR:ns ## COG: BS_yloR COG0036 # Protein_GI_number: 16078642 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Bacillus subtilis # 1 216 1 216 217 233 53.0 1e-61 MIKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKL PFDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPV SLLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGIND ITCVPIKRAGATVLVAGSAVFGAEDRASMIEFIRNN >gi|292596546|gb|ADCV01000002.1| GENE 201 210131 - 210883 1205 250 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371312|ref|ZP_03854796.1| SSU ribosomal protein S2P [Veillonella parvula DSM 2008] # 1 250 1 281 281 468 87 1e-131 MAVVSMKQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLSKTVKKVEEAYNFLREV ASQGEVILFVGTKKQAQEAIKEEAIRANMFFVNERWLGGMLTNFKTIETRIKRLKQLEAM AEDGTFEVLPKKEVIGLRHEMDKLEKYLGGIKDMPKMPGALFVVDPKKEKIAIAEAKKLG IPVVATVDTNCDPDEVDFPIPANDDAIRAVKLLAGKMADAVLEGRQGESFEEALDNMVAD SAEMVRDGKA >gi|292596546|gb|ADCV01000002.1| GENE 202 210982 - 211662 339 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 3 225 4 280 283 135 37 2e-30 MAITAALVKELRDMTGAGMMDAKKALVETDGNIDKAVDLLREKGLAAAAKKAGRIAAEGV VQSYIHAGGRIGVLVEVNCETDFVAKTDDFQNLARDIAMQIAAVNPTYLNREEVPTEVIE HEKQVLLEQAKVEAEEDVKAGRKPKPEAVLEKMVAGRIEKFYKENCLLEQVFIKDGDKTV TDIINESIAKIGENINVRRFVRYGLGEGIEKRQDDFVAEVMASVGK >gi|292596546|gb|ADCV01000002.1| GENE 203 211725 - 212450 1084 241 aa, chain + ## HITS:1 COG:SA1101 KEGG:ns NR:ns ## COG: SA1101 COG0528 # Protein_GI_number: 15926841 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Staphylococcus aureus N315 # 5 238 6 238 240 308 64.0 8e-84 MAKRKFRRIVLKLSGEALAGEQGFGINPDVVEEFAKEIAALAKSTDLEIAIVVGGGNLWR GLAGSNQGMDRATADYMGMLATVMNSLALQDALEQAGVDTRVQTAIEMQEIAEPYIRRRA IRHLEKKRIVIFGAGLGKPYFSTDTTAALRAAEIEADAILMAKKFADGVYDSDPKTNPNA VKFDELTYNEIITKELKVMDATSTTLCKDNNIPIIVFSMDIPGNITKAAKGEEIGTIVRG E >gi|292596546|gb|ADCV01000002.1| GENE 204 212456 - 213016 859 186 aa, chain + ## HITS:1 COG:lin1351 KEGG:ns NR:ns ## COG: lin1351 COG0233 # Protein_GI_number: 16800419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Listeria innocua # 4 186 3 185 185 180 58.0 2e-45 MEIKELLQQAEDRMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISV PEPRMIVIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHK KAEDAKVAVRNIRRDVNEALKKEEKAKTITEDDAKDGLDQIQKLTDAKVKQIDELKVVKE KDVLEV >gi|292596546|gb|ADCV01000002.1| GENE 205 213248 - 214012 708 254 aa, chain + ## HITS:1 COG:AGc2550 KEGG:ns NR:ns ## COG: AGc2550 COG0020 # Protein_GI_number: 15888704 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 253 2 241 247 253 49.0 2e-67 MLKKLFNRKRSDTPVIDRNIIPQHVAIIMDGNGRWAKRRGMPRSMGHRAGADVLKEIVMA ADEIGIRALTVYGFSTENWKRPEQEVSLLMSLIKEYLNNNVKYMHEHNVRIRFIGFIGGL SENLQKIIQDAELLTQNNTGLTLQLAINYGGRDEIVRTIRDIVKSVADGVITMDKITEEY VSSQLFTKEFSDVDLLIRPSSDFRISNFLLWQLAYAEFWFTDLHWPDFTKETLLEAVAAY QKRERRFGGLCDEE >gi|292596546|gb|ADCV01000002.1| GENE 206 214016 - 214840 742 274 aa, chain + ## HITS:1 COG:lin1353 KEGG:ns NR:ns ## COG: lin1353 COG0575 # Protein_GI_number: 16800421 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Listeria innocua # 2 264 1 255 262 131 35.0 1e-30 MLKTRVITAVIGFIIALGAITFGGLVYDVLITLLALLGWREFVLLGKAKRVRISIIWGYI SILLLMIALACHQYIIAIAILVLSLFANYMLCTFGETKYSMSSVSFSVFGLLYIGMGMTS LLLIRHDSIYMDLSMPFELYNWGTITLWLLLFTTWASDTFAYFSGRAFGKRKIVPSISPN KTLEGFIGGFIGCILTGAVFSYIVGIPWWMGIHVGMISGILAPLGDLFESKIKRLCNVKD SGTLLPGHGGVLDRFDSLLFAAPITLVYILLFSY >gi|292596546|gb|ADCV01000002.1| GENE 207 214859 - 216004 1240 381 aa, chain + ## HITS:1 COG:alr4351 KEGG:ns NR:ns ## COG: alr4351 COG0743 # Protein_GI_number: 17231843 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Nostoc sp. PCC 7120 # 1 378 2 384 399 374 47.0 1e-103 MKYLSIIGSTGSIGTQTLDVVSQHPDQFKVVALVAHHNIDLLEHQIKEYKPLVAGLVDEG AFKELQARYTGPTKLIGGKEALIAAATIQEATMIVTAIVGAAGIEPTVEAIKQGKTIGLA NKETLVAGGPLITALAKEHGVQILPIDSEHSAIFQCLEGQKRDNVDSLIVTASGGPLRTW DSSKIQTATAADCLRHPTWNMGNKITIDSASLFNKGLEVIEAHWLFGFDFDHIDVVVHPQ SIVHSMIRMKDGAILAQMGNPDMREPIQYALTYPKREVLSMNHLDFSQALQLEFLPPRYD DFPALRLAYEVGRASGFKPAVFNAANETAVYAFLEDKIAFGDIYKVVTSVLESMGPEDDF TLDNLLSIDRWAREKATSLML >gi|292596546|gb|ADCV01000002.1| GENE 208 216013 - 217029 1086 338 aa, chain + ## HITS:1 COG:FN1322 KEGG:ns NR:ns ## COG: FN1322 COG0750 # Protein_GI_number: 19704657 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Fusobacterium nucleatum # 2 338 1 338 339 212 35.0 1e-54 MITALATIFVFGLIVFIHELGHFITAKMSGMQVDEFAIGFGPAIFKVQKGETLYSIRIIP LGGFNRIAGMTPDEPLNERSFYNKPAWKKFIVISAGAVFNFILAIVLFFGLNVTVGNLTY TNEPVIGNIIAGSSAEQAHLEANDRIITIDGKKISTWDDIRPSLQGTANHGVTVVVEREG KTIETTVIPKMEQDSPKIGIYPSFTRETYSIGESLSLAVSRTGQTIVAMVSGIYDMIRGT QVAELSGPVGISQMAGTIAQSGFAPLLSFAAFLSINLGVINLLPLPVLDGGHLIIILAEA ITGRRLPAKALMYIQMVGVALMVALFLYVTTQDIFRLL >gi|292596546|gb|ADCV01000002.1| GENE 209 217048 - 218133 1235 361 aa, chain + ## HITS:1 COG:BS_yqfY KEGG:ns NR:ns ## COG: BS_yqfY COG0821 # Protein_GI_number: 16079562 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Bacillus subtilis # 4 349 9 353 377 379 56.0 1e-105 MIVRKPTNGIYVGTVKIGDYAPVSIQSMITTDPVHTEKAIAEINHLAEAGCELVRVAVPT MASAKALKAVRAGISIPLIADIHFDYRLALEAIENNVDGLRINPGNIGGEDKVLAVIEKA KPKQIPIRIGVNAGSLPKHILDAHGGHPTADGMVETALEHVRILEKLDYRQMKLSIKATE VPLMVEAYRKLSDKIPYPLHLGVTEAGTIKQGTIKSAMGIGALLLDGIGDTLRVSLTGDP IHEIEVGRSILSSLGLRNFGATMISCPTCGRCQVNLFDMAGIVEERLASIKAPIKVAVMG CVVNGPGEAREADFGIAGGDGQGIIFRKGKVIKTVPEAELVDTLFREIDQYLENLDEESL C >gi|292596546|gb|ADCV01000002.1| GENE 210 218127 - 219845 2058 572 aa, chain + ## HITS:1 COG:BH2419 KEGG:ns NR:ns ## COG: BH2419 COG0442 # Protein_GI_number: 15614982 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Bacillus halodurans # 9 572 9 567 569 616 54.0 1e-176 MLATKLYAPTLREVPSDADVVSQQLMLRAGFMRKTANGLYSFLPLGWRSIKKIEAIVREE MDRASAQEIMMPILQPAEIWKESGRWNAYGAEMMRINDRHDNEFCLGPTHEEMITTLVKN EINSYRQLPVNLYQIQSKFRDERRPRYGLMRSREFIMKDAYSFDVDEAGLDESYKSMYDA YTRIFTRCGLTFRPVEADSGAIGGSGTHEFMAIAEAGEADIVYCTKCDYAANIEIGKPGI MKQDEEVLHELSVVDTPNASSIEAVADMLNLPLHKTIKAVVFSIDGKVVLAIVRGDHEVN EVAVQHAVLGAVEPEMATPEELEKVGLIAGFISPIGLKQTEEFAIVVDESVMETYNVCGG ANKKDAHYVNINPKRDFNVEDIIVAPIRLITKDDVCPKCGGALEHAKGIEVGQVFKLGTK YSEALQATFLDQNGRPNPMIMGCYGIGVSRTLAAAIEQYHDENGIIWPRSIAPFEAVIVP INAKDEALMSTSQTIYTALQNAGVDVLLDDRKDRAGVKFKDADLIGYPLRITVSKNTLEN NEVEIQIRKSGEALPCAIDSVSDKVTELLQNL >gi|292596546|gb|ADCV01000002.1| GENE 211 219962 - 220789 885 275 aa, chain + ## HITS:1 COG:BH3372 KEGG:ns NR:ns ## COG: BH3372 COG0613 # Protein_GI_number: 15615934 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Bacillus halodurans # 4 248 13 250 266 152 36.0 7e-37 MLVDFHMHSIFSDGVETPKDLLQHAIDCNVSMMALTDHDEIDGIQALRAAQKKLDPNESI KIVNGCEFSADYKDKSIHILGYCFDENNKDLIDFITFFKGKREERIDEIIRRCNNEGYYI TKEELIKQFPDTKAYGRPHIGKLLIDGGYAKDINDVFKGILRKDSPCYVPKVKVEVPYII DIIHKAGGLAVMAHPKLVTSDEYVLEMLNYDFDGMEVYHSKHNDDDVERYKEFAKKHKLF ITGGSDYHGIVGKKPDRFGDYLVSGKDVSEFISLL >gi|292596546|gb|ADCV01000002.1| GENE 212 220805 - 221680 1079 291 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0868 NR:ns ## KEGG: Vpar_0868 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 291 1 291 291 525 99.0 1e-148 MEVVAFVGSSGTGKSHRALVVAHENKIECIIDDGILIHDNKIVAGFSAKKESSRLKAVRR AIFQDEVQVKSVQEQLDKIKPNKLMIIGTSDNMVKKITKALGLQEPDRYIRIEDVATPKE IEKAQHARLKEGKHIIPVPTMELKPHFRGYLIDPIKTMWRRRTLKKQDQDTLGQIGSEGF ERSVVRPAFSYYGRLTFDDEVIIKLIRNGLKKVAGVDETSIISFKKSDKGQNGLVVDMAV VIEHGYPVKPLMQQVQKSVRNEIEYITGMSIERMSIKVKNIIETKRKIVKV >gi|292596546|gb|ADCV01000002.1| GENE 213 221689 - 223002 653 437 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 426 1 426 451 256 35 9e-67 MKSYYIYTYGCQMNTADSERLSHQLESVGYIPTENVETADLILLNTCAVRENAETKVYGR IGELKRLKRNNKNLIIAVTGCMAQKNQAEMFKRAPHIDIVLGTHNIQHINEMIEEVQHGH THQISVDMDNSVLPELEAKPNGSFYAWVPIMNGCNKFCTYCIVPHVRGREISRPVEAIVK EVTDLGVKGFKEITLLGQNVNSYGLDFKDGTDFGTLIDALDGIPGIERIRYMTSHPQDMS KSMIDALGRSSNIVTHLHLPIQSGSNRILKKMNRHYTVEHYKELLSYCREKIKDVVVTTD IIVGFPGETEEDFQATLQLLKDVRYDMAYTFIYSKRSGTPAATMDDQIPEEIKRVRLQTL MDVQNEISYELNKPMEGQVFDIIVEGPSPRDEDMWFGRTSGNKMVLFPKDDSLSIGQTVP AHIDKAQTWVCYGSIVK >gi|292596546|gb|ADCV01000002.1| GENE 214 223231 - 224031 570 266 aa, chain + ## HITS:1 COG:FN0388 KEGG:ns NR:ns ## COG: FN0388 COG3315 # Protein_GI_number: 19703730 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Fusobacterium nucleatum # 1 264 5 269 269 266 49.0 2e-71 MKLDLNAVGETALLTLYARAKDYESDQSVLKDQKSWDILKHIDYDFDQFKDVKMSYYGIL GRAKVIDEEIRNFISLYPDCIVVSLGAGLDTMFYRVDNGYIDWYNIDFAGVIEARTQFFE PHERVHNLVSSITDELWTKNIEINGRKLLLVSEGVVMYLTLDEMKQFLGLLTDSFEEFTL YLDMISPYVAKRTKQHDMLSKMNVSFQWGTKDGHEIVVMNPKLKQTGLINFTGSMLSLAP IVYKLLYPFIYLFNNRMGIYEYKRNL >gi|292596546|gb|ADCV01000002.1| GENE 215 224058 - 226691 2336 877 aa, chain + ## HITS:1 COG:CAC1837 KEGG:ns NR:ns ## COG: CAC1837 COG0249 # Protein_GI_number: 15895112 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 6 873 4 868 869 723 44.0 0 MSKKQTPMMEQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEER TPMCGVPFHAAESYIETLVKKGYKVAICEQLEDPKAVKGIVKRDVIKVVTPGTVMTENGN DARSNNFLSLFYMVKDTWILVFSDVSTGEVIWHRITDCEKRSDMYDALSMYRPSEIILPE GTILPQDIQDFIENQFSNVVFSPFSTYYTQREVAEKAVTHFGDLGLMEEDVWEALGYMLL YLEDIIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTP MGARLLKQWLESPLTDINQIQRRQAAVSELITRGAERSHIRNFLDCIYDFERIVGRVETG SVSPRDLTALRESLAVLPDIKNVLGTCSSLALTSINERMQDHKDIYDLLCRAITEQPALT LKDGRVIKDGFNADLDELRSLATNSEQWLAKMEADIKEATGLSKIKTGYNKVFGYYFEVS HSKSEQVPDYFIRKQTLANAERYITPELKEFEIKILSAKDKIIALEHELYQQLRNDIKLV IKDVQETARALADLDVLCSLALVGYEENYICPTIVMNGQINIRDGRHPVIEKFLKREVFV PNDIVLNHDDEEFLLITGPNMAGKSTYMRQAAILMIMAQIGSFIPAREASISPVDRIFTR VGASDDISTGQSTFMVEMKEVAYILENATHNSLIILDEIGRGTSTFDGLSIAQAVVEHIC KHIHSKTLFATHYHELICLEESYSKLKNYTVAVKEKGKDVAFLRRIIKGGADRSYGIHVA RLAGLPNSVLKRAEVILESLEDQSHDASDLNNRVMGAQLTNVAKPAVKQVSDSPLGNLFS HSVVDSLLEVDVMSMTPIEALNKLYELQEEARKGGGK >gi|292596546|gb|ADCV01000002.1| GENE 216 226691 - 228736 1871 681 aa, chain + ## HITS:1 COG:MA0522 KEGG:ns NR:ns ## COG: MA0522 COG0323 # Protein_GI_number: 20089411 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Methanosarcina acetivorans str.C2A # 4 681 8 655 656 355 34.0 2e-97 MATIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDN GIGMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLTTRKADSDL GTRITVDGGTFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGKLAL SNPHISFKLIIDDRVAIITPGNGDISDTVATLYGYKTKDDIFTVAYESDSIYIDGVVSKP TLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPARMVDINVH PRKSEVKFSDDKIIFKAVYHGILNALNNPLHERYERESSSYMTGTVANISDKYGNDIASN SNSDIKKFSSNSTSLAGNTTYDSYQVPTVVHDSMQSAEHIATAIDYDKVFGGRRTKGYEV MRGETSQFVENLKTKGYTPPAPKATYEQSSFVDKSFEAVPTAYTSYTSEDVEKFKSLSHD IRNEEIEDRTIQNSGFLPMGQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIP MQSILVPQYSEATDDEMNLVEEERETLLDLGFDVELGGPTKIKLVGAPVDLVESKAFEIL QYIFSYLHDHQQPTKAQLRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEKPYVCP HGRPTIIKFTPDELGKLFLRS >gi|292596546|gb|ADCV01000002.1| GENE 217 228738 - 229550 564 270 aa, chain + ## HITS:1 COG:TM0524 KEGG:ns NR:ns ## COG: TM0524 COG0500 # Protein_GI_number: 15643290 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Thermotoga maritima # 3 267 5 253 254 144 32.0 2e-34 MNILTTAQKSNEAIQEEAKALASSMHMAYIKRGKLSIPALFNAHPCDFIAVLSGNGLTIH FPDNQQHSFHLSMAQLRILRLQRGEGDHLINAVQKILSTNEITDKEEFSFLDCTIGLGSD SIVVSYAFLQAKIKGLEGSLPIWLATSYGLAHYSHNVKSVTDALRRIEVSYDTFENYVPN LPDESIDIIYFDPMFEVPVEDSPQFKPLRGHTVESRIDDKIMEEAMRVASYGVIIKERPF SSVFQKYPPHQWVGGKYSRIGYGVYMKELL >gi|292596546|gb|ADCV01000002.1| GENE 218 229547 - 230476 658 309 aa, chain + ## HITS:1 COG:BH2366 KEGG:ns NR:ns ## COG: BH2366 COG0324 # Protein_GI_number: 15614929 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Bacillus halodurans # 4 294 5 294 314 226 40.0 3e-59 MNPLITIVGPTAVGKTDLTLDLAEQLHAEVISGDAYQVYKQFNIGTAKPSVDELNRVKHY LIDILEPNDSYSVSIFQDQAKEIIARLKDRNILPILSGGTGLYVQSLLENYNFNDVKPDE YLRAELDELYSTKGIEGLREYAFTLGKEHNIEIQYSDKHRLYRAIEILHHGDVDSLRNQT KDGVSYKGPVIGLMRDRDKLYERINLRVDMMFDAGLIEEVEQLIKSGVNPDCQAFKGIGY KEVVDYINDNITLDECRDLIKKNTRHFAKRQITWYKRMPYIEWIHIDSNTSKDFIFNKAM DLIRREGLA >gi|292596546|gb|ADCV01000002.1| GENE 219 230473 - 231711 1614 412 aa, chain + ## HITS:1 COG:BH2361 KEGG:ns NR:ns ## COG: BH2361 COG4100 # Protein_GI_number: 15614924 # Func_class: P Inorganic ion transport and metabolism # Function: Cystathionine beta-lyase family protein involved in aluminum resistance # Organism: Bacillus halodurans # 2 409 10 416 425 387 49.0 1e-107 MTLEEIRSKALEMAEPEFKKFEPIALANTKKVLEAFKECQVSDYHFTGTTGYGYNDVGRE KLDEVFAYVFKGEKAIVRPHFVSGTHALATTLISLMGNGSKGTEFIYAVGAPYDTMQSVI GAAREVRGSLVEKGFTYTEVPLKDNTYDVEAIANAVNDNTRVVVIQRSRGYSTREPLSIA DVKVIVDAVKAKNSKTICFVDNCYGEFTELQEPLEAGADIMAGSLIKNAGGGLAPTGGYI VGRENLVEDAAYQLTAPGLGDHMGSYAPGYRLFFQGLFMAPHVVLQALKGAVYTAAVGEL LGYDVFPKVNADRYDLIQAINLKNGEEMEHFCVGMQAYSPVDAHVHPIPGDMPGYEDKII MAGGTFVQGSSIELSADGPIRPPYTIFMQGGLVFEHSMLGILGAAEELLKHR >gi|292596546|gb|ADCV01000002.1| GENE 220 231910 - 232971 1134 353 aa, chain + ## HITS:1 COG:RC0410 KEGG:ns NR:ns ## COG: RC0410 COG0482 # Protein_GI_number: 15892333 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Rickettsia conorii # 2 351 13 367 370 290 45.0 2e-78 MEKVIAVAMSGGVDSSLTAAMLLKQGYKVFGITLWLWVSGTPYDEVPLAVTDAKKMCDFL GIEHHVIDARDVFYENVVDYFVKEYAYGRTPNPCVFCNKNIKFDLMLNRALELGATHMVT GHYAQVNYNEKTGLYELHKGVDPTKDQSYVMYNMNQRILSHLMFPLGGQCKTETRKLAAE YDLPVAKKPDSVDICFLPHGNYQKLVVEEMKGKPESGNIVTEDGEVLGKHNGLFNYTIGQ RKGLGIAYKHPLYVIGFNGDRNEVIVGPNEHLFTNRMICKFYNFLDDTIHKELKAEGKIR YAANPSPCTARILDDDTMEVIFEEPQRAITPGQSVAFYNGTQLLGGAVIDRVC >gi|292596546|gb|ADCV01000002.1| GENE 221 233010 - 234809 1830 599 aa, chain + ## HITS:1 COG:lin1514 KEGG:ns NR:ns ## COG: lin1514 COG0481 # Protein_GI_number: 16800582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Listeria innocua # 4 599 11 606 608 847 70.0 0 MSTKKIRNFCIIAHIDHGKSTIADRLIEYTGTLQKREMEAQVLDSMDLERERGITIKAQS VRILYKAQDGEEYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYL ALEHDLEIIPVINKIDLPSADPDRVKQEIEDIIGLDASDAVLCSAKSGIGIPDILEAIVN KVPAPPDKSDKPTRALIFDSRFDVYKGAIAYVRVKEGSIKAKDTIRMMHDKKDFDVTELG IFTPNLVPVQELPCGSVGCIAASIKNVKDCHVGDTVTLANNPASEPLPGYRKAVSMVYCG LYPTESKDYENLRDALEKLQLNDAALEYEAETSLALGFGFRCGFLGLLHMDVIQERLERE YNLTLITTAPSVNYKVYKTNGEMLEVDNPAKLPPPTEIDYIEEPYVKATTIVPKDFVGTI MELSQDKRGEYQSMEYLDETRVSVVYHLPLSEIIYDYFDKLKSATKGYASLDYELIGYKQ SPMVKMDILLNGDPVDALSIIVHKDRAAARGRALAEKLKELIPRQMFEIPIQAAVGTKIV ARETVKAWRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKSVGSVEIPQEAFMAILKVED >gi|292596546|gb|ADCV01000002.1| GENE 222 234814 - 235998 957 394 aa, chain + ## HITS:1 COG:SA1412 KEGG:ns NR:ns ## COG: SA1412 COG0635 # Protein_GI_number: 15927163 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Staphylococcus aureus N315 # 19 392 7 371 374 258 37.0 1e-68 MKTDSDILNLSTLRDMGLYVHIPFCKQKCMYCDFPAYQNLKDYYETYVYALVQEIDLWVS EHPESTSKAIDTIYFGGGTPTELSIQHLQMILDKIKNTFTITDDCHMTIESNPGEVNLHY LTKLVKFGFNRISFGVQTFDDKALTMLHRSHNGEQAKQAVYDAKEAGFADINIDLIYGLP RQSLDDIKRNLAVVEELPINHISTYGLQVEVGTYLYHLVQKNLIFIPSESIDESMYDTMM AGLKELGFERYEISNFAKANSYSRHNLKYWHYIDYLGFGAGAHSFYDGVRRSNNRNVMPY IQSVDRYIMPTIDTETITLERAQEDFSFLALRTKWGLDEQKFEDKFGVSVHDLFGTALDD LVSKGLLEYQNGSYHLTAEGAKHGNYVFSQFIRE >gi|292596546|gb|ADCV01000002.1| GENE 223 236080 - 236682 579 200 aa, chain + ## HITS:1 COG:MA3167 KEGG:ns NR:ns ## COG: MA3167 COG1251 # Protein_GI_number: 20091985 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Methanosarcina acetivorans str.C2A # 19 192 43 218 231 99 28.0 3e-21 MKTSVILHGLHNEFTLDQMKACIELAEKYGGSFRHVVTGIQITGIEKDDKEQFISELPDG VTTVIHRGVNSLIACVGKGHCKNGQMETKELADYVERKHYGRKTSHKCKIGISGCGRNCP DAMVKDIAFIGTSQGFMLAVGGNTGMRPEAGKILARKLTIEQSKKAVDILIDWYAKYGEP RERMGKLLERLGNPLEGVDL >gi|292596546|gb|ADCV01000002.1| GENE 224 237080 - 238108 768 342 aa, chain + ## HITS:1 COG:BH1344 KEGG:ns NR:ns ## COG: BH1344 COG1420 # Protein_GI_number: 15613907 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Bacillus halodurans # 1 336 2 338 343 220 36.0 3e-57 MDERKQRILRAIIEDYVKSAEPVGSRTIAKNYDLGISPATVRNEMSDLEELGYLEQPHTS AGRIPSAKGYRLYVDSMLSRQPVPLQDAEKIEMLWKRSNGSTSELFLNMAKLLSQVSHSM SLFLAPAHDRALIKYIHVLPLDSHQAIMVVITETGALDNELMYFGESVSPELLQSLAIQF SNALQNVSIGHVTAEALGSILVHMEGPQGILLILSETLLRAINKRKLFYSVGTTELLNQP EFKSVEKVQPLLSLVEEQNQLGQLLKDDSPTPVKVKIGIENETEALHSMSVVQADFTNQD QPIGTLAILGPTRMEYGRIIGMLSHMKHIMETMVKEQNRKGK >gi|292596546|gb|ADCV01000002.1| GENE 225 238108 - 238653 684 181 aa, chain + ## HITS:1 COG:BS_grpE KEGG:ns NR:ns ## COG: BS_grpE COG0576 # Protein_GI_number: 16079602 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Bacillus subtilis # 22 179 27 185 187 108 44.0 5e-24 MAEEQDIKQETVEETEDTTNVEEPTVEKTEEAVADAAQVLEELKADFDNRYKRLQADFEN FKRRTNQEKEQLAGYVKGDVLTDLLPVLDNFERAVQSPAEGEAKVFLDGFIMIHQNLMAM LSKHGLAVIEAVGQPFDPNFHQAIMRVPSDEYESDTVCEVLQTGYTVDGRCIRPAMVKVV E >gi|292596546|gb|ADCV01000002.1| GENE 226 238681 - 240522 2744 613 aa, chain + ## HITS:1 COG:BH1346 KEGG:ns NR:ns ## COG: BH1346 COG0443 # Protein_GI_number: 15613909 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Bacillus halodurans # 1 613 1 613 614 765 72.0 0 MAKVIGIDLGTTNSCVAVMEGGEPTVITNQEGARTTPSVVGFAKNGERLVGQLAKRQAVS NPENTIISIKRHMGTDYKVTVEGKSYTPQEISAMILQKIKADAEAYLGEPVKQAVITVPA YFTDAQRQATKDAGAIAGLEVLRIINEPTAAALAYGVDKDEDGKVLVFDLGGGTFDVSIL ELGDGVFEVLATSGNNHLGGDDFDQRIMNYLIEEFKKETGIDLSNDKLADQRLKEAAEKA KIELSGVASTNINLPFITADATGPKHLDVTLTRAKFEELTADLVQATIEPTRKAMSDAGL SASDIDKVLLVGGSSRIPAVQEAIKKVLGKEPTKNVNPDECVAIGAAIQGGVLVGEVKDV LLLDVTPLSLGIETMGGVFTRIIDRNTTIPTSKSQVFSTAADNQPSVDIHVLQGEREFAA DNKTLGRFNLDGIPAAPRGVPQIEVTFDIDANGIVHVKAKDLGTQKEQKITITSSSGLKE EEIDRMVKEAEAHAAEDKARKEELDVKNNADSLVYQAEKALKDLEGKGDAALMKEVEEAK DKLKKSIEAGNIEDIKKDSEALEQPLHKLAEQMYAAAQQAQQAAGGAEQGQQQTKSDDNV VDADYTVVDDDKK >gi|292596546|gb|ADCV01000002.1| GENE 227 240539 - 241696 1319 385 aa, chain + ## HITS:1 COG:RSc2634 KEGG:ns NR:ns ## COG: RSc2634 COG0484 # Protein_GI_number: 17547353 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Ralstonia solanacearum # 3 364 4 358 380 336 53.0 5e-92 MARDYYDILGVSKNASQDEIKKAFRKKARQYHPDVNKDNPKEAEAKFKEANEAYEVLSDE TKKAQYDQFGHDAFKQGGGAGAGGFQGGFGGFGGQAGGFGDIFGDIFGGMFGGGRQQQGP QKGNDLREDIDISFEDAAFGKSMEIEVHRHEECDHCHGTGGEPGSRVDTCPNCHGSGQEA VIQNTPFGRMQSVRTCSRCHGTGKSIEKPCSKCRGTGEMLAKRKISIKIPAGVDSGSRLR VANEGEPGILGGPKGDLYVYIFVRPHKEFERNGNDVISRVNISFAQAALGATIQVNTLDG KVELKIPEGTQTGTAFRVKGKGIPYLRNPNQRGDQHIVVTVQTPKKLTDTQRELLLRFAN ESNEDVNNLQVSKSLFEKIKDCLTK >gi|292596546|gb|ADCV01000002.1| GENE 228 241752 - 242615 1435 287 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371283|ref|ZP_03854767.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase [Veillonella parvula DSM 2008] # 1 287 1 287 287 557 95 1e-157 MQWIEVSIVCERVATDEVTTLFDDYADNGIIEEDVENQPNLIKLTMYADISLDMNMIKAD LVKRLTEANIKVISIDTDILDESTWLNSWQQYIEPTEILPNLIIKPAWQEYNNVDNKIII EIDSDISFGTGSHETTRTCAELLKSYSKSMDLDTVTCLDIGTGTGILLLVAAHLGIKNLV GIDIEEYAANQARINCENNHVSAEIICGNLDSDFNGTAQLILANLTVDPLKILLPQIGKK LDDRGILIISGIIDDRYDEIMPYIEAHWHIIEERVAGPWHTFALEKR >gi|292596546|gb|ADCV01000002.1| GENE 229 242612 - 243343 498 243 aa, chain + ## HITS:1 COG:BH1350 KEGG:ns NR:ns ## COG: BH1350 COG1385 # Protein_GI_number: 15613913 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 242 1 247 250 117 32.0 2e-26 MKKIFIPTPLDEIIELPKDVTHHVLHVFRHNMEKPITVTGSDNRCGTYQITAEVDGKAQA KLIEYVEGNLASYRTILVQSLLKGEKLEWVLQKATELNVDTIYLVPTANCVAKYDEKKLQ SKVNRWEKIMLEAAQQCGRNHLPTLVVGETLLQALDIESEALKLVAYENEAGQTIKDVLK TLHSDKSVTDVLICIGPEGGYQEKEINAIIKYGGKSVSLGNTILRAETAAIGSLAMIRYE LEL >gi|292596546|gb|ADCV01000002.1| GENE 230 243368 - 244663 942 431 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 1 420 1 419 451 367 44 1e-100 MKTVAFTTLGCRVNQYDTDAMKGLFLQNNYEAVDFDEKADIYVINTCSVTNMGEKKSRQL IRKAKRQNEDAYVIVTGCYAQLDPDAIAAIDGVNLVIGTNNRSKIVELVEQLESTERQIN AVRDIMKESNFEEMPLYGNESDKARAFMKIQEGCNNYCAFCIIPYTRGKLKSRKVDDIVQ EAKRLVDHGFHEIVLTGIHLGNYGVELPGRPTLADVVKALLEIPNLYRIRFGSIESVEVS DELVELMATNKRVCPHLHLPLQAGSDHVLKLMKRHYTLQEYKDLITSLRSRIKDLSITTD IIAGFPQETDEDFEETLNTVREIGFTHIHAFPYSIREGTPAATMADQVPEAVKKTRVALL NGLSQSGYERYAKSRIGKPGEILIEKEENGYYMGLTNEYINGKVKSDGTRKIGDLVGGTV VGLEDNYLIIE >gi|292596546|gb|ADCV01000002.1| GENE 231 244675 - 245019 434 114 aa, chain + ## HITS:1 COG:aq_141 KEGG:ns NR:ns ## COG: aq_141 COG0537 # Protein_GI_number: 15605719 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Aquifex aeolicus # 3 112 5 119 121 129 52.0 9e-31 MSDCIFCKIINGEIPSKKVLENDKFYAFYDIQPVKKVHVLIVPKNHVSNIAHLNEKNADY VEGLLPFVRDVAKELGISKDGYRLIFNTGEKAGQTVFHMHAHLLGGEEMGWPEA >gi|292596546|gb|ADCV01000002.1| GENE 232 245177 - 245356 292 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371279|ref|ZP_03854763.1| SSU ribosomal protein S21P [Veillonella parvula DSM 2008] # 1 59 1 59 59 117 100 7e-25 MSEIKVGKNETLESALRRFKRSCQKAGVLSEVRKREHYEKPSVKRKKKSEAARKRKFRA >gi|292596546|gb|ADCV01000002.1| GENE 233 245439 - 245882 293 147 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 146 1 146 147 117 42 5e-25 MSLKDQLKEDMKAAMKAREEGKTALSVIRMVNSAIKNTEINDKIELDDAGILGILAKEMK TRQDSLTEFEKAGREDLISHVKEEMAVLQKYLPEQLKEDEIRTIVQEAIAACGDNVNMGN VMKHVMPKTKGRADGKVVNNIVKELLG >gi|292596546|gb|ADCV01000002.1| GENE 234 246119 - 248023 2431 634 aa, chain + ## HITS:1 COG:XF1842 KEGG:ns NR:ns ## COG: XF1842 COG0174 # Protein_GI_number: 15838440 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Xylella fastidiosa 9a5c # 219 445 230 425 504 109 34.0 1e-23 MSTTNELLYYIPAGQYGKEGVLALLEQHPEIKFVSLVGIDLAGNDTDEKIPISAFFDDYE SFFEGRAVQTDGSSVVLTNIATLNNARVDMWGDPSVNWFVDYNYENIDPVTGLPTGTLRI PAFLMHNYRYVDSRSILKRSCDYVRAELLALIKEHGLPGMPHVKADEVVDIIFTSATELE FWVKTPSRTVTKKELSVSQKLQEQYWQRTHGTVRTALEQAVERLDRYGMVAEMGHKEVGG VKAKLDEDGHEAVVLEQLEIDWKFSNNPLQTADNELQARIIVREVFRENGLDVTFNAKPI IGVAGSGEHTHFGVMAKLKSGKVVNLFSPEDMRKESASSLGIGAIMGLLKHYEAINPFIS STTDSLNRLKPGFEAPVCIVTSLGTDPSEPSRNRTILCGLIRDIDNPMATRYELRSPNPY TNTYTALALIFISAFDGMKYAITSGKTQAQLEAELSKEVGETSDYLATNRAYRTEKDVFD DFTQEERNQMFGVAPATVWENIKGYQNNPELVETLAQGNAFAKDLMDSFIASILKRWKLV LANRLIPNNLDTVRSMVAIHTDSRNSVDDKRFAEVNDLRFYLAKDSDDRKSLFTRLIDAL NDGEYDLASQLQIEMNDKMEELEAKYANYAKNIF >gi|292596546|gb|ADCV01000002.1| GENE 235 248129 - 248524 399 131 aa, chain - ## HITS:1 COG:YPO3717 KEGG:ns NR:ns ## COG: YPO3717 COG3223 # Protein_GI_number: 16123855 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 5 122 10 126 135 86 48.0 1e-17 MWIRISKLLLTIKNIALVGVGIALCIALINTLISLVYVTWANIQGYSTYSLLIEELITFF LYFEFIALIVKYFKNNFHFPLNFFLYIGITAIVRLLIINHESSFDNLIWSVAIFVLVCSL VLVEKFIGHNE >gi|292596546|gb|ADCV01000002.1| GENE 236 248635 - 249150 896 171 aa, chain - ## HITS:1 COG:BS_ytgI KEGG:ns NR:ns ## COG: BS_ytgI COG2077 # Protein_GI_number: 16080001 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus subtilis # 8 169 4 164 167 206 62.0 2e-53 MEKRTGVVTFAGGPITLVGPEIKVGQQAPDFTVLSNDLQAKTLKDFEGKVKVISVVPSLD TGVCDAQTRWFNQDATALSEDVVVLTISMDLPFAQKRWCGAAGVDKVVTLSDHKDASFGE NYGFLIEELRLLTRGVVVINKDNKVTYVEYVPEVTQAVNFDAALEAIKADI >gi|292596546|gb|ADCV01000002.1| GENE 237 249562 - 251289 176 575 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 331 552 279 507 563 72 25 2e-11 MKPIDLFMQFFRREGWIYAIGLTMLMAIDVAFLFVPQFIGNAIDTLSNNKEGLVTYIFYF ILLFIIITILKVISRRTLLGSIRRMEYLFREILCSKALQVKTTYYEANGPGKVMALMTND VTSLRVALGLGVMIIVDIIFYSIVGSIILIQKINTVLAFKIMTPVFLIIVAIFVLGRKLR IKQRSAQATYSDLTEFGQELFQGMDVIRAFNRESIISNSFEKINKLNYKKNMDVALLDAI LTPLTRIAPFICISISIFICGHLAVEGKMTIGEFVTINSFIMLIVGPLIGFGGLISIVQK GLASLDRIMDFLHLPTETIDDTDEVLPLEDIHIRYLDFTYENSKGHALSQLTTTIPKGSF IGLVGKPGSGKSTLFKLLIGLQECPEKSIYFGSQDLATVSLSKLRNSIAYVPTQSYLLST TIADNIKFGKDLSMHETVELAAQKADLYRDLGDLLNDDLHELAEEGHDLSGGQKQRINMA RGFYKNAPYVLLDDCFSALDAVTVTTILNSLHNVKDQTILCISQRLEVVEKADKILVFDE GRIVEEGTHEELLGNNGLYRTLYEAQNGGGHHEEA >gi|292596546|gb|ADCV01000002.1| GENE 238 251276 - 253021 217 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 343 565 132 353 398 88 28 3e-16 MKKRDLRNDWALFSYITGYIKPYLGILFLATVALAGNLVLLLLRPYLTKQVIDLGFATND IAVIEYYALMYGFTIIGSVLFIFVENYFLKSFGQKIIYNIRSIIFQKILNKPHDEFYKLP IGNWVTRITNDVESLRTLYTDVILNLASSGLMIIGILGFMYAINVPLAIIMTILLPIMGG IIWVFQKFSRKAFRQVRRSVAASNASIKELLNYIVIVKSYGGERAIEERYNTVNKGFLEA GLFEVTTFSIFRPLVDSLFFVALIVIFTTTNLIDSVADAGTVFAFIQYMDRFFQPLKEIA DKYNSLQSALAGAERLVPLLEEEERQMANEVPDEFKYIETIEFEHVWFSYENNDVYALED FTFTIKAGEFIGIVGPSGSGKSTLLSLLMGIYKPTRGAIYINGINIAQYDSSVLRHLMGY VFQQAYLFKGSIRDNLTLFDTSISNEDMVNAAKQVNLHSMIEHLPEGYDTPVGYLGSLLS DGQKQLLAFGRTLIKKTPILLLDEATANIDSHTEKQIQASIENIRGSKTIVSIAHRLSTV KDANKIVYMEYGKIIEIGSFDELINLKGTFYNLWNNQHSGS >gi|292596546|gb|ADCV01000002.1| GENE 239 253023 - 253817 752 264 aa, chain + ## HITS:1 COG:CAC2358 KEGG:ns NR:ns ## COG: CAC2358 COG0566 # Protein_GI_number: 15895625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Clostridium acetobutylicum # 4 263 5 261 261 153 34.0 4e-37 MECIQSKDNKTIKRIISLGQRKNRQKYGEYIVEGIRSIRDIAAMGAVKTIVIRESKAQDK HVLDLLDLDTVQFVPKFIAQDPIFDKVDNTVNGQGVVAIVSKPKYDMESIHIDDGLYITL DGVQDPGNLGTIIRTAVAAGVKGIFLMKGTVDPFNDKTVRSTMSALHKIPLYEDITLSLL HDMVTESNMTTYVTALEHSNPYHTVRYAKRTMLVLGNEGNGVTPEVMNLCTNRIMIPMYG DMESLNVSVAAALCMYKVQEQLMP >gi|292596546|gb|ADCV01000002.1| GENE 240 253977 - 254831 652 284 aa, chain + ## HITS:1 COG:VC1285 KEGG:ns NR:ns ## COG: VC1285 COG3394 # Protein_GI_number: 15641298 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 3 284 2 244 252 107 28.0 2e-23 MSKLIVNADDFGLHSAVNAGIIDGHRRGIITSTSLMAGGEAFTEAVSMAKQNPKLGIGIH ITLVGGVKPVCDPSEVSSLLTPEGVFPENYVEFIKRIYSGKINYSELRKEIHGQIAQIMD TGLRVTHIDGHQHMHVLPTVLPIVIEQAKSFGIHAIRIPDESTGFMNYMYSPIRFLGKVG LSTVAANARPIIRNNCMTTTQYFWGMVNGGHINQKSLMGILKAVNKHSGTHELMVHPGSN SSILSKLYNWGYHWEDELQALCSSHTRLYISQHDIELINYGDLV >gi|292596546|gb|ADCV01000002.1| GENE 241 254858 - 255820 591 320 aa, chain + ## HITS:1 COG:AF2231 KEGG:ns NR:ns ## COG: AF2231 COG0392 # Protein_GI_number: 11499813 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Archaeoglobus fulgidus # 3 303 5 313 328 67 21.0 4e-11 MFLLLLAVSIGIIYYTIDLDALKAISSFNSISLLLAVVALVAGMYFDGLRLQRLVKIGGY KLSIRAVLRVIFSNYFMAMLTPGASGGAVAQVLVLRSYGVPISKGTPIVLIRTVFSIMFL VIMLPLVFLRDAIEIPYISRDMLLIFAVLAVIAALVGTYILQTKYMRQFVYNLAQRFKAH NTKDWLSKLETLNQGLGLLYKQPVQSLIVFIESGLSLLCLYCIAPALMYAFTPDIPIIDI LDRMILLNLILYFAPTPGGTGIAEGLFVVLFSAFVPNGTVGIIAVGWRVVAEYMPFFIGM YAVLTLYGRQFVAQETSREQ >gi|292596546|gb|ADCV01000002.1| GENE 242 255834 - 256283 475 149 aa, chain + ## HITS:1 COG:BS_pheB KEGG:ns NR:ns ## COG: BS_pheB COG4492 # Protein_GI_number: 16079843 # Func_class: R General function prediction only # Function: ACT domain-containing protein # Organism: Bacillus subtilis # 5 149 2 146 147 125 41.0 4e-29 MSKPKKDKFYLVQEDILPEAIKKTIKVKEILKLGEVKTINEAVEKMDLSRSAYYKYKDYV FPFFEIAQGKIVSIYVSMSNESGMLSSVLKAIAERNGSILTINQDIPLQGIANSSISFET KDLQGSLEDLLLDIRSMKGIIKVEILGQA >gi|292596546|gb|ADCV01000002.1| GENE 243 256308 - 257597 1507 429 aa, chain + ## HITS:1 COG:CAC0998 KEGG:ns NR:ns ## COG: CAC0998 COG0460 # Protein_GI_number: 15894285 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Clostridium acetobutylicum # 1 426 1 425 429 362 46.0 1e-100 MTTIKIALLGFGTVAQGTFNLLQDNAELIKNRTGVNVEISKIYVRNPEKYSHITLPETAK YVTDIDEVLKDDSIQMVVELMGGTSFAKDCVEGALKAKKNVVTANKDLLAEAGPYLLDLA SKNGVDLRFEASVLGGIPIIRTLYESLAGNRITEIIGIMNGTTNFILTKMSEEGLSYQDV LKEAQDLGYAEADPTADVEGLDAARKLAILASISFNRRIFFEDVTVEGITCIDTEDIKFG KEFGYNIKLLGIAKETAQGLSLNVYPAFIPTTHPLASVRGSYNAIYVKGNGIDDVMLYGR GAGSLPTGSSVVSDIMEVAKNVSYNETGRLKPFYYDQKDIYSPGKIQSSYYLRLAVDNKT GVLAKISAKLAEQKISVLSIVQRNMDPETAVLAIVTSKCPRSYILNLIDSFNSLRSVKAV NSVIRIMEA >gi|292596546|gb|ADCV01000002.1| GENE 244 257600 - 258514 824 304 aa, chain + ## HITS:1 COG:sll1760 KEGG:ns NR:ns ## COG: sll1760 COG0083 # Protein_GI_number: 16330283 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Synechocystis # 1 303 1 302 306 192 39.0 7e-49 MNTVRVQVPATSANCGPGFDCLGLALNLYNIFSFTPDENATEYTYTFEGFGADILRAEDP KKNLIGFAMDQVFATAQEPIRYGHITSETLIPPSRGLGSSSTAIVGGLLLANALVKHPLS KEELLVIANRMEGHPDNVAPAIYGNLCCATGLKNKVLNTVISIPPELHFAVVVPEVMVST EYARSVLPNHIPFKEAVQNVSHASLFVTSLITHQLSNLSVALDDNLHVPYRKTLIPHCDE VFEVAKVAGAYGATISGSGSTLIAYVDKAHVQEVAKAMGAVFTANEIENKIYCLEADTTG ALII >gi|292596546|gb|ADCV01000002.1| GENE 245 258570 - 259445 834 291 aa, chain + ## HITS:1 COG:PAB0758 KEGG:ns NR:ns ## COG: PAB0758 COG0501 # Protein_GI_number: 14521348 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Pyrococcus abyssi # 4 281 7 283 289 281 51.0 8e-76 MNNIKTTLLLATLTAILVVIGDMIGGRSGMIMMFVISMGMNFMSYWYSDKIVLAQYNAQP VTAQSNPKLYAMVEKLTKNGNLPMPKVYIIPSEVPNAFATGRNPSHAAVAVTEGIQRLLT DEELEGVLAHELTHVKNRDTLISTIAAMMAGAISMIANILQFTAIFGRSDDREGTNPLAL LGTIIIAPIAAGLIQMSISRTREFLADEGGGDMCRNPLALASALAKIDYYSKHGALPNAS NATAHMFIINPMMGIGESLSNLFSTHPRTEERIQKLKKQAMNPKYKEKVIL >gi|292596546|gb|ADCV01000002.1| GENE 246 259468 - 259875 582 135 aa, chain + ## HITS:1 COG:AF0767 KEGG:ns NR:ns ## COG: AF0767 COG0105 # Protein_GI_number: 11498373 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Archaeoglobus fulgidus # 1 133 1 133 151 170 60.0 7e-43 MQETLVLIKPDAVKRQLSGEILSRYERKGLVIKSLKLLQVPRELAEEHYAEHKEKPFFGE LVDFITSGPVLAFVLAGENAIVSVRALNGATNPVDAAPGSIRGDYALTMDANVVHASDSP EAAAREIHLWFPEYK >gi|292596546|gb|ADCV01000002.1| GENE 247 259940 - 260455 633 171 aa, chain + ## HITS:1 COG:SMc00731 KEGG:ns NR:ns ## COG: SMc00731 COG2096 # Protein_GI_number: 15966394 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 3 169 5 180 192 133 46.0 2e-31 MASSVYTKTGDAGTTGLYTGERVQKSSLRVEAYGTIDELQAFLGLARAYAENPRVAAELY DIERNLWTLMADIASLNTAPVITEQYVKHLEKVIDRFDAKLEPLSSFVIPGEKQSSAYLH VARTITRRAERALWRVLDAGESVHESNLKYLNRLSDLCFILCRVEEELGAE >gi|292596546|gb|ADCV01000002.1| GENE 248 260502 - 260837 368 111 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0904 NR:ns ## KEGG: Vpar_0904 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 111 1 111 111 216 100.0 3e-55 MEIMNMKLKMMATLWDNTYRVAIDDGQGKYIGTARVVVNVPLPPEALPENAPQVEAQLLV LVEDFDFGADKIINFETTLANLLREKFRYEIPHIFFYYPSPQDVLNQTISQ >gi|292596546|gb|ADCV01000002.1| GENE 249 260901 - 261479 375 192 aa, chain + ## HITS:1 COG:AGc2839 KEGG:ns NR:ns ## COG: AGc2839 COG2087 # Protein_GI_number: 15888864 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 184 4 172 173 144 43.0 1e-34 MKSQIILCSGGARSGKSEFAERLALATKGPKAYVATGQAFDEEMVDRIKKHQERRGKIWN NFEVPLHLADEWENISQSADVILIDCLTMFTTNHMMAYGSIRGQEDANRLEQTILSELDT LLDSIQSCEGKTVIFVTNEIGLGIVPDNKLARYFRDIAGRVNRAVASVADKLYLTISGVT IELKSQEVHING >gi|292596546|gb|ADCV01000002.1| GENE 250 261472 - 262989 1689 505 aa, chain + ## HITS:1 COG:STM2019 KEGG:ns NR:ns ## COG: STM2019 COG1492 # Protein_GI_number: 16765349 # Func_class: H Coenzyme transport and metabolism # Function: Cobyric acid synthase # Organism: Salmonella typhimurium LT2 # 1 504 1 499 506 456 47.0 1e-128 MAKKIMFQGTSSNVGKSILCTALCRIFYRKGFKTVPFKAQNMALNSYVTKWGDEIGRAQV AQAEAAGIDPIVQMNPVLLKPTGNQSSQVVLMGKPVGVYSAKEYHTKYSLTALDKVKESI DFLDSNFDMMVIEGAGSPAEVNLKANDIVNMRIAKMTQAPVFLIADIDRGGAIASIVGTL ELLEPEERDLIKGIVINKFRGDIKLLEPALTFIEEKTGKKVVGVIPAIENLDIDEEDSVA LENKRNSGTKDIQVVVMQTPKISNFTDFDALNYEPDVSVRFVGPGDVIGTPDLIILPGSK NTLADLTYLRDTGFADEIKKLAAQGTPIIGVCGGNQMLGKTIYDPHHMEGDIEEIEGLGL VESSTTMKAQKTTHQVQFNVSNLQFLNGTFRGEKLVGYEIHMGDTTPLADSVSRCFTITS RSEEAVNVIDGFIDGNHQVMGTYIHGVFDNDEFRRFIINQLRERKGLQPLDVVFHYFDHK NAAYNRLADIVEEHLDMDYIMSTLG >gi|292596546|gb|ADCV01000002.1| GENE 251 263002 - 263994 777 330 aa, chain + ## HITS:1 COG:STM2034 KEGG:ns NR:ns ## COG: STM2034 COG1270 # Protein_GI_number: 16765364 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobD/CbiB # Organism: Salmonella typhimurium LT2 # 21 314 8 301 319 228 40.0 1e-59 MEHLAIFHWFSKYNFVCIPVLAFLLDLIIGDPNSKYHPVAIIGRIISFFEAVLYKDTDND TKKLWYGGIAVGLILISVYIIVSLLLWLGGVVDEWVYYAFEVVILYIAISPRSLAGAGFT ISQLIKQGNIVDARKRLSWIVGRDTEDLDESEITRATVETIAENTVDGIIAPFFFFIIGG PMGAILYRTANTMDSMLGYKNQKYLYFGRVAARFDDILNWIPARITFVLFVISAFFLRFD AKKAIEIGLRDAKKHPSPNGGYAEAPVAGALHIRLGGYNQYFKKMTFREYMGDPIEKLNR NHITRTIYMMYVTTILMVIISTVITYGMNV >gi|292596546|gb|ADCV01000002.1| GENE 252 263994 - 264887 708 297 aa, chain + ## HITS:1 COG:FN0912 KEGG:ns NR:ns ## COG: FN0912 COG0368 # Protein_GI_number: 19704247 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Fusobacterium nucleatum # 1 282 1 272 278 115 33.0 7e-26 MTPFFIALQFLTRLKIVNQTEWSVEDFGKSVVAFPYVGLIIGLILAILYGVLSPFIPIMP LMLIIVVAEFLITGGLHADGLMDTSDGLFSGRERERKLEIMKDSRIGSFGVVAFVFVTLL KWQLLASIPSAEFIPMALIMMPLMSRWSMVFSIRSYPYAREQGMGAAFANLAPKHVITYN TISTFFMPILLLLIGLVLYTLLYGAYAILSAPDVGYLVGLGVLVYATIGIFQINIVSMII TYIINRLLNRYIVKALGGTTGDTYGFVVEVTEVLLILVYSIILSILSATVVNNPTMF >gi|292596546|gb|ADCV01000002.1| GENE 253 264961 - 265845 668 294 aa, chain + ## HITS:1 COG:lin1134 KEGG:ns NR:ns ## COG: lin1134 COG4542 # Protein_GI_number: 16800203 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase # Organism: Listeria innocua # 8 281 8 272 291 141 34.0 1e-33 MTYYVRAPGTCGEFLQGSIDGQSFLVTCPINRYSYALSNVIQPFSKEFCALQPKSAQARK LVQELVQQKNKNQICPPVYVRSDILQGKGMASSSADISVTAMATALAMDYDLSLKELEQI CLSVEPTDASFYQGVTQFDYIKGTISKPLGMCPPLKILVFDEGGSIDTVSFNKQADLQNK ILEKESIIQESFDLFKQGLTTHDIKLIGQAATLSAFGNQRILYKPNLYDFHDVGNSYNSV GTIIAHSGTIMGLLFPVDYGRINDCKNEILRKLPQLSYVDTVETTNEGLTYIKR >gi|292596546|gb|ADCV01000002.1| GENE 254 265870 - 267000 886 376 aa, chain + ## HITS:1 COG:lin1133 KEGG:ns NR:ns ## COG: lin1133 COG0079 # Protein_GI_number: 16800202 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Listeria innocua # 2 374 5 358 361 193 31.0 5e-49 MSKIHGGNIFQFAHEQRIEPYEVIDFSANINPLGPSQRGLSALEPQLRYISHYPDATNDD ILNAIADIYGMNKNQIVVGNGAAELLYAICRLPGYTGAFVPAPGFSEYKAALEASRIPVR DIYYRPREDEHGKPYFEVPYLALETFAAELKGQDGRIIVFLGNPNNPDGTLLDKNHIRTI ASMLKDANSLLVIDESFIDFVGNDTLQDNEYSMRSLVNEFDNIIVVHSFTKFYAVPGLRI GAAFSNPLIIEQLNSFIPTWSVNTLAQSYTEAALNDVEYVKRTKQVLHEEQLFMYNSLDT INGITVYPPSANFILFHIEQEGITAESINEALKKYNMIVRNCDSYMGLNNQWVRVAIKDH DTNVKLVEKLTDILKV >gi|292596546|gb|ADCV01000002.1| GENE 255 267008 - 267646 756 212 aa, chain + ## HITS:1 COG:alr3338 KEGG:ns NR:ns ## COG: alr3338 COG0406 # Protein_GI_number: 17230830 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Nostoc sp. PCC 7120 # 4 205 234 437 449 132 35.0 3e-31 MKTLYIVRHGETDWNKMGKYQGITDVPLNENGLNQAKACGQALKDVKFDRILSSDLSRAL VTAEVIRGERTTPITVDKRLRELNFGDWEAMLFSDIEDRWPGLIDEMYLRPHLVKVPNGE SFKNLQDRAWAGLEEFINVNNEEETLLIACHGGTIRTLLCKLLDISISHCWNFSQGNTAI NRIFYNGMGEFDHNILNLLNDTAHVDVLQGHA >gi|292596546|gb|ADCV01000002.1| GENE 256 267646 - 268344 538 232 aa, chain + ## HITS:1 COG:lin2436 KEGG:ns NR:ns ## COG: lin2436 COG1187 # Protein_GI_number: 16801498 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Listeria innocua # 1 227 1 227 233 191 43.0 7e-49 MRLDKLLANKAYGSRKEVHQIIKDRRVTINGSITTKKDTHIDIDVDIVAVDGKIVSTTQL YYVKFHKPKGYVTAVEDSSHPVVMDLLPPEFIKMGVVPVGRLDKDTEGLLLLTNDGVWGH SIINGNKHVPKVYYVEFEGTLSDEGIQRIKEGILLGDGTQCKPAEIEFVSLHSVHVTIEE GKYHQVKRMIGAAGGTVTYLKRLTIGHIDLSGIEEVGSAMELTVEQIEGFKK >gi|292596546|gb|ADCV01000002.1| GENE 257 268415 - 269488 1151 357 aa, chain + ## HITS:1 COG:SA1360 KEGG:ns NR:ns ## COG: SA1360 COG0006 # Protein_GI_number: 15927110 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Staphylococcus aureus N315 # 1 353 1 350 353 291 43.0 1e-78 MNGLNLLQQYIKEQELTGVILISPINLHYFAGFTGTTGFAIITQDKAFMITDFRYTEQAT KQCEGYTVIQYETTVMDTLVDIFNEHHIHEGLFGIEGKQMPVDTYETLCDTLDERFNFTS INFAKLRAVKREDELDLLRKAAKIGDDAFAALLPQLKVEMTENEARIILESEMLKRGSEE PSFATIVASGNRSSMPHGVASDKVIEAGDFVTFDFGAVYKGYHSDMTRTIVMGPASELQK KLYGIVLEAQKRGVAAVRAGITGKELDAVCRDYIKEHGYTKEFNHGTGHGVGLEIHEEPV ANTKSDTVFTENMIITVEPGIYITGTIGLRIEDSVIVKSDGYEVLTHSPKELIEIGI >gi|292596546|gb|ADCV01000002.1| GENE 258 269504 - 270061 865 185 aa, chain + ## HITS:1 COG:BH2799 KEGG:ns NR:ns ## COG: BH2799 COG0231 # Protein_GI_number: 15615362 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Bacillus halodurans # 1 185 1 185 185 236 60.0 3e-62 MISSNDFRPGVTVEIDGNVWQVVDFQHVKPGKGAAFVRTKMKNLQTGSVVERTFNAGEKV PKAHVDRRRMQYLYESDGSYTFMDNETYDQVELTLEQLGDAKNFLLENMEVSIMFFQGIV IGIDLPVAVELRVVETDPGIRGDTATGGNKPAVLETGYTVKVPLFIEVDDVLRIDTRTGQ YIERA >gi|292596546|gb|ADCV01000002.1| GENE 259 270182 - 270577 353 131 aa, chain + ## HITS:1 COG:CAC2085 KEGG:ns NR:ns ## COG: CAC2085 COG1302 # Protein_GI_number: 15895355 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 6 124 1 119 131 72 35.0 2e-13 MKEASMTKKNTELESGKIKINDDVYATIVTMTALDTKGIHHMSSTFNDGVNTFFRRKSDH EGVKISFNDEGAISVTLYVCIQYGYRIPDVVLRLQERIKTALVSYTEIEVQTIDVVVQDI IFDDLVTPQQP >gi|292596546|gb|ADCV01000002.1| GENE 260 270589 - 270984 533 131 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0916 NR:ns ## KEGG: Vpar_0916 # Name: not_defined # Def: protein of unknown function DUF322 # Organism: V.parvula # Pathway: not_defined # 1 131 1 131 131 244 99.0 1e-63 MSSDNQLNYGLDTDTIDIADSVIIDVATKTLGTIPGIHSLSPRFYDELVEGITHAFGQRS LPGINVKHRKGFIEINIYIKALYGYNLIELSKQLQLEIKQTLKNMLDLDHIKVDVHIEGI VKEKEPVLHGN >gi|292596546|gb|ADCV01000002.1| GENE 261 270974 - 271378 496 134 aa, chain + ## HITS:1 COG:PA4052 KEGG:ns NR:ns ## COG: PA4052 COG0781 # Protein_GI_number: 15599247 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Pseudomonas aeruginosa # 7 128 21 143 159 75 34.0 2e-14 MVTKRNRREARQYAFQMLYANEFHTDQNDVQFPEGNIHKAMDKAYANSIIEGVLSNVEAI DATLQPFCKSRKVANLDKVDRSILRIAVWEMNNKVEPLEPSIAINEAIQLAKEFGSDASY KLINAILDAYNKSK >gi|292596546|gb|ADCV01000002.1| GENE 262 271378 - 272331 819 317 aa, chain + ## HITS:1 COG:MTH1425_1 KEGG:ns NR:ns ## COG: MTH1425_1 COG0533 # Protein_GI_number: 15679424 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Metal-dependent proteases with possible chaperone activity # Organism: Methanothermobacter thermautotrophicus # 6 317 4 303 337 96 27.0 7e-20 MKRYYLGIDTSCYTTSCAIVDSDFHIVGEARKILEVKLGERGLQQSNMVFQHTKALPKLM SELPQVPISGIGVSGFPRREERSYMPAFMVGLGQGQTLSHLMNVPLHIFAHQENHILAAL RDLKNIPNDPFLALHLSGGTTELLYCHYQGNGIFESHIVGGSRDLQGGQYVDRIGVALGL PFPAGKHLEALALQTTEYEPLPSSVKDGWISFAGPCSAAMRRINNAMSDIDKSKLARAVF TSIGNALEKMITYHTKEKPVRALIAVGGVMSNSLLRKRMETYCKRNHLQLHVAQPQFSVD NATGNAFGAAYLQESRG >gi|292596546|gb|ADCV01000002.1| GENE 263 272334 - 273557 1051 407 aa, chain + ## HITS:1 COG:STM2512 KEGG:ns NR:ns ## COG: STM2512 COG1570 # Protein_GI_number: 16765832 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Salmonella typhimurium LT2 # 2 395 8 443 449 234 32.0 2e-61 MNVLTITQLNNLIKRTLDREYLLKNVYVSGTIINAKRHSSGHMYFSLKDEESAIDVTMWS STVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGAKSPLQLEFDALKRELT ALGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAG PIIAKGIATADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVGHETDY TLCDYVADVRGATPSHAAEMAVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNR KLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFA KVEHDNKPITSVAQLQPNDDIRVTLADGYITATVKEAHKDGRITKKL >gi|292596546|gb|ADCV01000002.1| GENE 264 273532 - 273738 367 68 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0920 NR:ns ## KEGG: Vpar_0920 # Name: not_defined # Def: exonuclease VII small subunit # Organism: V.parvula # Pathway: Mismatch repair [PATH:vpr03430] # 1 68 1 68 68 90 97.0 2e-17 MAASLKSYEKKYKALEDIVKQLDDGDMTISELLSQYKKGLTLVKECAEMLDSVENEVQQI IEEVRISE >gi|292596546|gb|ADCV01000002.1| GENE 265 273748 - 274626 969 292 aa, chain + ## HITS:1 COG:slr0739 KEGG:ns NR:ns ## COG: slr0739 COG0142 # Protein_GI_number: 16329282 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Synechocystis # 29 290 37 300 302 230 49.0 3e-60 MFKDYLASSKQNIEQWLGEVLNSPNQEFEQLYESMNYSLMQGGKRIRPILTKAVLEMLHK EPADYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYA FQLMTSNTVASAQQKLDAIQCVATAAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTG ALFNASVELGLILGCANNTTRTFLMEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIR QHKSTYVSLLGLEQAKHQAYLVGSQAHDALNLVSYDTTILSALIDYLLERTN >gi|292596546|gb|ADCV01000002.1| GENE 266 274655 - 275134 503 159 aa, chain + ## HITS:1 COG:slr1394 KEGG:ns NR:ns ## COG: slr1394 COG1963 # Protein_GI_number: 16329803 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Synechocystis # 8 148 7 145 151 114 42.0 1e-25 MIDILPQIAHNYIAQAAFWGWFTAQAIKFVWQLLRHGKFRPERLVGSGGFPSSHTSFVIA TTTAIYLKNGVTDLFILSLVFSIVVMYDASGVRLEAGRQAQILNQIVDYFTKKNIPVVIT RKEALKELLGHTPIEVFGGLILGILVAFIQFYCIYHGVI >gi|292596546|gb|ADCV01000002.1| GENE 267 275131 - 275934 654 267 aa, chain + ## HITS:1 COG:CAC2076 KEGG:ns NR:ns ## COG: CAC2076 COG1189 # Protein_GI_number: 15895346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Clostridium acetobutylicum # 3 265 4 263 267 306 58.0 2e-83 MNNKERLDILLVNRGLFESREKAKAAIMAGLIFMDTTRIDKAGTKIPADANIIVKGNTLP YVSRGGLKLEKAIQTYPIDLHGAVMIDIGASTGGFTDCALQNGASKVFAIDVGYNQLAWK LRQDSRVINMEKQNIRTVTAEQIGELVDFISIDVAFISLDKVLPVATNLLKDTGSLVALI KPQFEAGKENVGKGGIVRDSEIHKEVLHRILHVAYDCGLYTHGLTFSPIKGMEGNIEFLG YFKKYEEGALTIDDTLIDTVVAEAHSL >gi|292596546|gb|ADCV01000002.1| GENE 268 275944 - 276828 913 294 aa, chain + ## HITS:1 COG:MK0742 KEGG:ns NR:ns ## COG: MK0742 COG0061 # Protein_GI_number: 20094179 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Methanopyrus kandleri AV19 # 10 278 11 265 276 137 29.0 2e-32 MRIGFFPNMGKSNIMAVLKMAAHICKDEGIEVFLPDDLESDAPARVLKIPETHILSRPEI FKQIDIAFSFGGDGTIIHLARQIYPYNVPVCGINLGELGFLNQIEIHQMQSHIKRIANGD YNIEKRGHLYAYIERHEGKEEELVPIINEIVITRAEPAKMARINMSINNQHTQMYPSDGL IISSATGSTGYNLSAGGPIMKPDNRSIIVTPVAPHLIQGVSLVLEEHDTIQITMPEREPQ LHICIDGTFDYTFTNKETLHISSNPVYCLFVRFKDQCFFGTLFKKLASRRDELL >gi|292596546|gb|ADCV01000002.1| GENE 269 276853 - 277428 349 191 aa, chain + ## HITS:1 COG:CT830 KEGG:ns NR:ns ## COG: CT830 COG0500 # Protein_GI_number: 15605565 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Chlamydia trachomatis # 2 191 8 192 194 114 32.0 1e-25 MININNAVQFQHLIWDRCMENAKVVVDATCGNGHDLLYLSKRAQKACHLYGIDIQMKAIK TSKELLQSNDIAPEVSLTFIHDSHDLAVAHQLKDEVIDLMIFNLGYLPGGDHQVVTKPHQ TIDAINEGLHKLSKSGVITIVAYPGTTEGFEEMQSLKSYLSDLNQKIYNVCHWHPMNQIH NPPELFILQKR >gi|292596546|gb|ADCV01000002.1| GENE 270 277749 - 278204 614 151 aa, chain + ## HITS:1 COG:BS_ahrC KEGG:ns NR:ns ## COG: BS_ahrC COG1438 # Protein_GI_number: 16079481 # Func_class: K Transcription # Function: Arginine repressor # Organism: Bacillus subtilis # 2 149 3 149 149 124 41.0 8e-29 MKRYRYNKIKEIVQSKAIETQEELAAALLEEGIEVTQATVSRDIKELMLIKIPTGDGHYR YALSPEENVVLSRSRINRLFQDSLIKVDHSLNQVVLHTIPGSAQSVAFSIDHAKWTEIIG TLAGDDTILLIAKSEAEVPAILAKIQDLMKD >gi|292596546|gb|ADCV01000002.1| GENE 271 278209 - 279873 1721 554 aa, chain + ## HITS:1 COG:L0264 KEGG:ns NR:ns ## COG: L0264 COG0497 # Protein_GI_number: 15672842 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Lactococcus lactis # 1 550 1 553 555 322 36.0 9e-88 MLTQMSIRNFALIEQMNISFNDGITIFTGETGAGKSILMDAFSILLGERASSEFIRHGKD SFVIDGIFDIANHQSIQDLLESKNIMIEEGQLILSRSFNRNGKSSILANDQPIPLKALKE IGQYLADIHGQYSNQRLLDADTHHEYLDTFNKEGKEAYKAYTDAYKMYKQAKQDVDHLQE NMSERARELDMLRYQIDEIEDAGLSVGEDVTIAEELKRLDSFEHIDKVLGSCYDAFYNGR QPLLDTINLIKVEVNDLVKYDSELKEVSEMVDSAYFQLEEAAQSLDRYRDTISYDEERYK YCQDRDTTIYSLKKKYGETVEDILAYEEKAQSRLEELEGLVFAQDELETRLEEAKKVAEE ALTVLHEVRQKNAKDIATALHQELVDLGMPKGDIQFHIEEGTELSSLGAKSIEMLFSANK GEQLLPLHKVASGGELARIALAFKSVFRSDAFKTMVFDEIDVGISGDIALKVAEKILNLS RTNQVFCITHLPQTASIAKQHYHLSKIEQDDRTISTLVVLNEEERVTQIASMMSGKGMSA TALAAAKELIDHFN >gi|292596546|gb|ADCV01000002.1| GENE 272 280164 - 280961 1024 265 aa, chain + ## HITS:1 COG:lin2021 KEGG:ns NR:ns ## COG: lin2021 COG0289 # Protein_GI_number: 16801087 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Listeria innocua # 2 265 1 262 263 229 45.0 5e-60 MIRVMVNGAGGKMGREVVKAVHNDPDLTLVGGIDPTKAGEDVGSVAGIEQLGIKMNASID EVLDTNKPDVIVDFTNPAVIYENAKKMLSAGIHVVIGTTGLTAEQRDELDTIGRSNQANC LVAPNFSLGAVMMMKVSAELAPYFPNVEIIELHHNHKYDAPSGTAILTAKLINDAKQAAK VTADEDLTRESLLGARGAKVDDVTIHSVRLPGYVAHQEVLFGGYDETLTIRHDSLSRLSF MPGVVLACKKISSKTGLTYGLEHYL >gi|292596546|gb|ADCV01000002.1| GENE 273 280985 - 282016 1395 343 aa, chain + ## HITS:1 COG:BH2401 KEGG:ns NR:ns ## COG: BH2401 COG0136 # Protein_GI_number: 15614964 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Bacillus halodurans # 5 339 8 344 349 361 54.0 1e-99 MKKPNIAILGATGAVGAEFITLIEERNFPYENLKLLASARSAGTELTVNGKTYIVEEAKP ESFDNIDIALFAGGSISKTLAPEAAKRGAIVIDNSSAFRMDPEVPLVVPEVNPEDILKHK GIIANPNCSTIIMSLGLKPLHDLSPIKRVVVSTYQAVSGAGKEGIEELENQVKQYTAGEE MTANLLPTGSAPKHYPVAFNLLPQIDVFLENDYTKEEMKMVYETQKILHDETIQVVPTTV RVPVYRSHSESVLVETAEPVSVEAFKAACEKFPGLQVKDNPAEQIYPMPLYTSNQNDCEI GRIRKDLYNDKGMNFWIVGDQIRKGAALNALQIAEYLVEKQAF >gi|292596546|gb|ADCV01000002.1| GENE 274 282038 - 282925 1002 295 aa, chain + ## HITS:1 COG:BH1742 KEGG:ns NR:ns ## COG: BH1742 COG0329 # Protein_GI_number: 15614305 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Bacillus halodurans # 5 290 4 286 295 264 49.0 2e-70 MKTFGRVLTAMVTSFNNDGSVNIENCVAIANHLLDNGSDGLVVCGTTGENPTMSRDEKLA LFNAIAKECGHKGSIIANVGSNDTMASAEFVKEVSKIDGIDGLLVVVPYYNKPNQQGQYL HFKTIAEATTLPIMVYNVPSRVGTGIFPTTLVQLHNEYPHICAIKEASGNLMIASEIKRL MPGDDFMVYSGDDGLTLPMLSIGGCGVVSVVSHVAGKDMNAMIQAYESGHNYEAIRIHQA LSEIIKAMFITTNPIPVKYAARKIGLPVGKFNLPMCEPTADEAAYIDKALAEYLK Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:47:27 2011 Seq name: gi|292596545|gb|ADCV01000003.1| Veillonella sp. 3_1_44 cont1.3, whole genome shotgun sequence Length of sequence - 2525 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 67 - 126 8.1 1 1 Op 1 12/0.000 + CDS 242 - 634 403 ## COG0853 Aspartate 1-decarboxylase 2 1 Op 2 . + CDS 707 - 1549 943 ## COG0414 Panthothenate synthetase 3 1 Op 3 . + CDS 1561 - 2496 635 ## COG0385 Predicted Na+-dependent transporter Predicted protein(s) >gi|292596545|gb|ADCV01000003.1| GENE 1 242 - 634 403 130 aa, chain + ## HITS:1 COG:CAC2916 KEGG:ns NR:ns ## COG: CAC2916 COG0853 # Protein_GI_number: 15896169 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Clostridium acetobutylicum # 1 126 1 126 127 159 64.0 9e-40 MILTMLKGKIHRATVTQAELDYVGSITIDTDLLNASGIREYEQVQIVNINNGARFSTYTI AGEAGSGVICLNGAAARHVQVHDKIIIMCYAQLDESEVESHNPLVVFVDNNNKISHIKNY EKHGLLVDQK >gi|292596545|gb|ADCV01000003.1| GENE 2 707 - 1549 943 280 aa, chain + ## HITS:1 COG:CAC2915 KEGG:ns NR:ns ## COG: CAC2915 COG0414 # Protein_GI_number: 15896168 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Clostridium acetobutylicum # 1 278 1 280 281 326 56.0 3e-89 MEFITTIENVRNTVNSWRKEGYTIGFVPTMGFLHEGHAALIDQARKNNDKVIVSIFVNPI QFGENEDLSTYPRDINSDKKLCESHGVDLIFAPNPEEMYQDKKAFVNIADLSDTLCGIRR PIHFKGVCTVVAKFFNITQPTNAYFGEKDAQQLAIIRKMVFDLNFPVNIIGVPIVREKDG LAKSSRNTYLSSEERKAATILYKAIQLGKQTIQYGCSAKCIIDTMTDTIQTEPLAKIDYI SVVDAKTMQPVQEVTAPVLVAMAIYIGPTRLIDNFSYDPK >gi|292596545|gb|ADCV01000003.1| GENE 3 1561 - 2496 635 311 aa, chain + ## HITS:1 COG:BH0858 KEGG:ns NR:ns ## COG: BH0858 COG0385 # Protein_GI_number: 15613421 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus halodurans # 1 304 1 302 323 224 40.0 1e-58 MNHLLTLNNVLSKYLIFIILGFSCIAYIVPEYFTWAIAYTPFLLGIAMFGMGLTIKFESL CSILRHPKDICIGVLAQYTIMPLLAWGICHIFTLSPDIVIGVILVGCCPGGTASNVITYI ANGDVPLSVGMTITSTLIAPIVTPLLILYIGGAWVDVQVLPMMITMVKVIIVPILLGAVI QYVCKSHINTLTSISPIFSMIAIILLIAAIIAINKDKLLISGLETLIVVGIHNILGLLLG LGVGALLKLRYDKTTALAIEVGMQNSGLAVTLAATNFALNPLATLVGAIFSVWHNISGAI FATLRRENSLH Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:47:44 2011 Seq name: gi|292596544|gb|ADCV01000004.1| Veillonella sp. 3_1_44 cont1.4, whole genome shotgun sequence Length of sequence - 62694 bp Number of predicted genes - 49, with homology - 48 Number of transcription units - 26, operones - 13 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 32 - 703 882 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 814 - 873 5.8 + Prom 609 - 668 5.2 2 2 Tu 1 . + CDS 916 - 1266 415 ## Vpar_0935 peptidoglycan-binding LysM + Term 1288 - 1340 9.1 - Term 1284 - 1321 4.2 3 3 Tu 1 . - CDS 1390 - 2400 1144 ## COG0582 Integrase - Prom 2468 - 2527 7.8 + Prom 2414 - 2473 8.3 4 4 Tu 1 . + CDS 2507 - 3853 1125 ## COG2720 Uncharacterized vancomycin resistance protein + Term 3871 - 3928 9.8 + Prom 3955 - 4014 11.6 5 5 Tu 1 . + CDS 4044 - 4661 561 ## COG0671 Membrane-associated phospholipid phosphatase + Term 4684 - 4720 4.0 + Prom 4854 - 4913 7.3 6 6 Tu 1 . + CDS 4954 - 5103 226 ## Vpar_0940 hypothetical protein + Term 5117 - 5179 6.1 - Term 5121 - 5154 5.4 7 7 Op 1 . - CDS 5211 - 5954 834 ## Vpar_0941 hypothetical protein 8 7 Op 2 . - CDS 5956 - 6864 1043 ## Vpar_0942 hypothetical protein - Prom 6903 - 6962 5.4 9 8 Tu 1 . - CDS 7005 - 7943 351 ## Vpar_0943 hypothetical protein - Prom 7974 - 8033 7.2 + Prom 7914 - 7973 7.1 10 9 Tu 1 . + CDS 8093 - 8842 619 ## COG0500 SAM-dependent methyltransferases + Term 8860 - 8911 17.2 - Term 8843 - 8903 19.6 11 10 Op 1 2/0.000 - CDS 8913 - 10202 1786 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases - Prom 10249 - 10308 4.8 - Term 10212 - 10242 2.7 12 10 Op 2 . - CDS 10322 - 11566 1505 ## COG0499 S-adenosylhomocysteine hydrolase - Prom 11700 - 11759 5.3 13 11 Op 1 . - CDS 11766 - 12830 1267 ## COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 14 11 Op 2 . - CDS 12873 - 13667 1031 ## COG0005 Purine nucleoside phosphorylase - Prom 13704 - 13763 4.9 - Term 13703 - 13761 6.1 15 12 Tu 1 . - CDS 13777 - 14655 1217 ## COG1281 Disulfide bond chaperones of the HSP33 family - Prom 14707 - 14766 8.1 - Term 14800 - 14837 6.4 16 13 Op 1 18/0.000 - CDS 14851 - 15312 810 ## COG0054 Riboflavin synthase beta-chain 17 13 Op 2 15/0.000 - CDS 15382 - 16584 1579 ## COG0807 GTP cyclohydrolase II 18 13 Op 3 16/0.000 - CDS 16600 - 17256 813 ## COG0307 Riboflavin synthase alpha chain 19 13 Op 4 . - CDS 17237 - 18448 861 ## COG0117 Pyrimidine deaminase - Prom 18468 - 18527 3.7 + Prom 18756 - 18815 9.6 20 14 Tu 1 . + CDS 18928 - 20670 2347 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] + Term 20726 - 20763 6.4 - Term 20712 - 20751 3.0 21 15 Op 1 . - CDS 20767 - 21225 147 ## Vpar_0956 hypothetical protein 22 15 Op 2 . - CDS 21271 - 21480 258 ## Vpar_0957 hypothetical protein - Prom 21514 - 21573 5.9 - Term 21531 - 21578 9.1 23 16 Op 1 . - CDS 21608 - 25399 4433 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 24 16 Op 2 . - CDS 25402 - 26379 728 ## Vpar_0959 DNA polymerase III delta 25 16 Op 3 7/0.000 - CDS 26391 - 28292 643 ## COG0658 Predicted membrane metal-binding protein - Prom 28452 - 28511 6.2 - Term 28294 - 28343 2.3 26 16 Op 4 . - CDS 28576 - 29145 435 ## COG1555 DNA uptake protein and related DNA-binding proteins - Prom 29264 - 29323 9.6 + Prom 29015 - 29074 6.8 27 17 Tu 1 . + CDS 29257 - 30486 1265 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) + Term 30590 - 30633 12.6 - Term 30573 - 30627 16.3 28 18 Op 1 . - CDS 30647 - 31126 513 ## COG2131 Deoxycytidylate deaminase - Term 31132 - 31177 5.2 29 18 Op 2 . - CDS 31202 - 33670 3031 ## COG0495 Leucyl-tRNA synthetase - Prom 33698 - 33757 5.6 30 18 Op 3 . - CDS 33761 - 35443 1632 ## COG3858 Predicted glycosyl hydrolase - Prom 35572 - 35631 9.6 + Prom 35504 - 35563 12.6 31 19 Tu 1 . + CDS 35601 - 36425 1070 ## COG0682 Prolipoprotein diacylglyceryltransferase + Term 36452 - 36500 11.1 - Term 36435 - 36494 12.6 32 20 Op 1 6/0.000 - CDS 36534 - 37850 1547 ## COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation 33 20 Op 2 13/0.000 - CDS 37840 - 40215 2896 ## COG0550 Topoisomerase IA 34 20 Op 3 2/0.000 - CDS 40205 - 41431 535 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake - Prom 41466 - 41525 6.0 35 20 Op 4 2/0.000 - CDS 41538 - 43235 1171 ## COG0606 Predicted ATPase with chaperone activity 36 20 Op 5 1/0.143 - CDS 43248 - 43646 373 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase - Prom 43844 - 43903 4.7 - Term 43763 - 43815 13.1 37 21 Op 1 8/0.000 - CDS 43942 - 44739 1006 ## COG0164 Ribonuclease HII 38 21 Op 2 1/0.143 - CDS 44732 - 45637 1229 ## COG1161 Predicted GTPases - Prom 45742 - 45801 7.4 - Term 45777 - 45815 9.5 39 22 Op 1 . - CDS 45822 - 46163 561 ## PROTEIN SUPPORTED gi|227371193|ref|ZP_03854677.1| LSU ribosomal protein L19P - Prom 46233 - 46292 4.7 40 22 Op 2 . - CDS 46317 - 46709 308 ## COG1846 Transcriptional regulators - Prom 46729 - 46788 4.0 - Term 46787 - 46829 6.3 41 23 Op 1 19/0.000 - CDS 46870 - 48921 2970 ## COG0751 Glycyl-tRNA synthetase, beta subunit 42 23 Op 2 . - CDS 48923 - 49798 1229 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 43 24 Op 1 . - CDS 50158 - 50607 207 ## Vpar_0978 hypothetical protein 44 24 Op 2 . - CDS 50686 - 51051 213 ## gi|294793778|ref|ZP_06758915.1| conserved hypothetical protein - Prom 51071 - 51130 3.7 45 24 Op 3 . - CDS 51149 - 51247 100 ## - Prom 51455 - 51514 8.6 + Prom 51553 - 51612 13.4 46 25 Tu 1 . + CDS 51691 - 52629 299 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase + Term 52696 - 52737 1.1 - Term 52675 - 52733 11.5 47 26 Op 1 . - CDS 52738 - 53640 215 ## gi|294793780|ref|ZP_06758917.1| conserved hypothetical protein 48 26 Op 2 12/0.000 - CDS 53630 - 60454 6763 ## COG3210 Large exoproteins involved in heme utilization or adhesion 49 26 Op 3 . - CDS 60486 - 62351 1137 ## COG2831 Hemolysin activation/secretion protein - Prom 62382 - 62441 5.5 Predicted protein(s) >gi|292596544|gb|ADCV01000004.1| GENE 1 32 - 703 882 223 aa, chain - ## HITS:1 COG:BH2356 KEGG:ns NR:ns ## COG: BH2356 COG1974 # Protein_GI_number: 15614919 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Bacillus halodurans # 6 220 2 204 207 189 46.0 4e-48 MRRPATDINTKQRRILEFIKDSLHNEYRCPTVREICTHVGLSSTSTVQSHLNALEKFGYI KRDPNKNRAITVLEDTKPSISVTGNETSSSDNFEFLGAGLKQVPLIGTVQAGMPITAVEN LESTLTLPVQLTGDSDCFLLRVQGESMMNIGMYEGDMLIVRHQNTANNGDVVVARIDDEA TVKRFYKENGHIRLQPENDDFDPIIVDDCHIEGLVIGLVRDRI >gi|292596544|gb|ADCV01000004.1| GENE 2 916 - 1266 415 116 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0935 NR:ns ## KEGG: Vpar_0935 # Name: not_defined # Def: peptidoglycan-binding LysM # Organism: V.parvula # Pathway: not_defined # 15 116 1 102 102 178 94.0 7e-44 MFSDIMFDVNVRYEMKNILMMVGMCLTVLFGYNMSNPATEVNTHNVREVKVQVGDTMWDI AARTAHKDMDVREMVYTMKELNNISDSGALVPGTVLKVPTNKSDSPVRALDYMAQN >gi|292596544|gb|ADCV01000004.1| GENE 3 1390 - 2400 1144 336 aa, chain - ## HITS:1 COG:mll9356 KEGG:ns NR:ns ## COG: mll9356 COG0582 # Protein_GI_number: 13488164 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 24 311 67 368 389 110 27.0 5e-24 MSESKKQQKHFYLRNNDALMNSTKLSMKAKQSILLSKAENTLDAYESDWDDFVDWCTYQK VSYFPATPETIVNYINDLADYAKANTISRRISAISENFNASGQRNNPCMAPIVKQALRGI RRLKGTFQQGKTPVLLEDIEDIIDCMAKLNVPELQLLRDKAILLIGFMGAFRRSEIAAIT VENLQFLPQGVEIFVASSKADQEGQGAVVAIPHLSASPLDAVRALQQWLRASGITEGPVF RGFTKNMSLRKTAISDKMISEIVKKYISLIGLDPTMYGAHSLRHGFATTAAAYGVEERNI MRQTRHHSVNMVRRYINEANKFVDNPISTIFEKRFR >gi|292596544|gb|ADCV01000004.1| GENE 4 2507 - 3853 1125 448 aa, chain + ## HITS:1 COG:CAC0691 KEGG:ns NR:ns ## COG: CAC0691 COG2720 # Protein_GI_number: 15893979 # Func_class: V Defense mechanisms # Function: Uncharacterized vancomycin resistance protein # Organism: Clostridium acetobutylicum # 31 374 37 381 411 160 35.0 4e-39 MTKKYILVGTVFVLLGTTGCSYIPTENISYGVYYNDTDLSNTPKNKLQARLQELNDKIPQ TISIDMGNNKKQQATYHDLGIQFDTEGLVKAISTYGYEDDMWTVLSHRFNGLFYGHHFKP QYKLDEVKGKTYLTELAKTIDTPGHDAYLTVENGQVVIHPAKEGKRIDIDATLKKLKDDL QSGDSINSLSMVFTTQNTVKVTDTDLKPLNTVLASFTTEYNPGNESRTHNIQLASDKING TLIKPGAQFSFNDVVGERTAEAGYDDAPVMIDGKLVPGIGGGICQVSSTIFNTALLSGMN IVERTPHFEPVGYIQAGRDATVAWGYLDFKFRNPYQHSIYILSVMNNGTLTIYIIGTAQD KPKNVSISVGDYSEIPNKTITKVDPSLKEKEVQEGHVGLKMNTYRTITYGNWVTQTDSFE SVYDPVDTIITMPTTSEAAVKKGDKKKT >gi|292596544|gb|ADCV01000004.1| GENE 5 4044 - 4661 561 205 aa, chain + ## HITS:1 COG:CAC2438 KEGG:ns NR:ns ## COG: CAC2438 COG0671 # Protein_GI_number: 15895703 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Clostridium acetobutylicum # 23 172 24 162 180 94 36.0 1e-19 MDTILQFDHSLIFYVHEHFVYSFLTPIMAFISKITSNGALWIIIALLLMLQKKYRVLGVA IIIALGFVFIIGDQGLKPNVARLRPFVDFPNVTVPLESALPKATSYSFPSGHSFGSFASS MTIYLGLTQIAPQKRYLGILALLGSIVVAFSRVYLFAHYPTDVLTGLVLGIIVGFIAWKL ARIGWNWWTNRHNDVKYEPYTFKRK >gi|292596544|gb|ADCV01000004.1| GENE 6 4954 - 5103 226 49 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0940 NR:ns ## KEGG: Vpar_0940 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 49 1 49 49 80 89.0 2e-14 MCWCDIVSKAKIGGLKHLGNGMESSLRFLAEMVVGLSIIRVLVNWIFGI >gi|292596544|gb|ADCV01000004.1| GENE 7 5211 - 5954 834 247 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0941 NR:ns ## KEGG: Vpar_0941 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 247 1 247 247 469 99.0 1e-131 MEQSKLTSEWIQTFNRLGSEGKLKPTVPYHDLFNRKELKGFPLHTLPMWTVNFPTGYITC CDPLVTLPSKPDTYLRQVTPGTYLLETKIIEMEPNEYRYVASRVVFSGNEPVYYELALKG TEDLTDLDDGDTYIGFPVDSGLATIVDAQTIETYNKFYEQWHINYPEKNIYDDYYSDLFQ LNAMAYPQYQRSKGDWINFTIPDTELTVPMIQSGFGDGLYPVYWAFDKDGQICQIIMEYI DCSEAYE >gi|292596544|gb|ADCV01000004.1| GENE 8 5956 - 6864 1043 302 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0942 NR:ns ## KEGG: Vpar_0942 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 302 1 302 302 592 99.0 1e-168 MITYKKDSKDNLLSPDSSMPVLAMCYDFDKTLTPDDMQAQGFIQSVGYNEEQIKQFWHES NQLAKKHDMDNNLAYMYKMIQEAVGHFYVTKDKLMEYGNQVELYEGVRTWFERICQYGLE QGVKIEHYIISSGLKEMIEGTEMAKEGAFTKIYASAFMFDDKGVAVWPAQAINYTNKTQF LFRIQKGILDINDTGVNDYIKPENQRVPFRNMIYIGDSDTDIPCMSLVNANGGHSIGVYD PFKKDKEKVYKMMRHHRIRYYAPADYSNGSKLDTLVKQIIRKTAAYEVLEGEYIHCKYEA EE >gi|292596544|gb|ADCV01000004.1| GENE 9 7005 - 7943 351 312 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0943 NR:ns ## KEGG: Vpar_0943 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 312 1 312 312 619 91.0 1e-176 MILQTGQRTDIPAFYGKWLINRIREGFVDVRNPYNPLQVTRYPINQEVVDGIAFCTKNPL PFIPLLNKIIDYRQYWHMTITPYGTDIEPYVPTYASVIEGFKHISKLLNPQSMVWRYDPI ILTNEYTVDFHCESFYKMAQALKGYTDTVVVSFLDILDKVAQNFPEGYRPSLDVQTKIIK EFVSIAHSNHMNLKTCGERDIFKEFGADTEGCLTLDCYERAWNIKLKAPKRTPARLECNC YLHGDIGAYDSCSHFCRYCYANTNQAVVRYNRLHHDPNSSLLIGRLSKREIIKESTEKSW IVKETVTQDSLF >gi|292596544|gb|ADCV01000004.1| GENE 10 8093 - 8842 619 249 aa, chain + ## HITS:1 COG:MA3459 KEGG:ns NR:ns ## COG: MA3459 COG0500 # Protein_GI_number: 20092272 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 18 235 7 234 249 146 38.0 3e-35 MNDIFERNHPMKDDKEFITSYWADRAHDFGALRAKELESPKLKLWREELTCHIFDSYRSL RILDIGCGAGFFSIILSQLGHTVHGIDITPNMIDEANQLAESLDCDATFSVMDAENLGFD TNTFDIVVARNVTWNLPHPDKAYAEWFRVIRPGGLILNYDAEHARNHHNVPQSVHHAHEN VSNELKERCHTIYHMLDISSYTRPQWDKELLTKLGVSSVTIDLTVGPRIYNEEDEFYIPV PMFLVKAIK >gi|292596544|gb|ADCV01000004.1| GENE 11 8913 - 10202 1786 429 aa, chain - ## HITS:1 COG:MA1276 KEGG:ns NR:ns ## COG: MA1276 COG0402 # Protein_GI_number: 20090140 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanosarcina acetivorans str.C2A # 1 423 11 432 442 351 45.0 2e-96 MSELLITHVDVLTDEGVLKNHAIEINNGYITAILNDREVEKVKDSAKEVLDGKGQLATPG LVNTHTHIAMGLFRNYADDLELMEWLETAIWPTEAKLNDDYVRYGTQLGIAEMLRTGTTT FSDMYFFMNTTAEVVKETGIRSVLSRGLAGVSPTADQALVENVDLFRTWNGFDNDRIKVL LGPHAPYTCPDDYMEKVIALSHELNCGIHMHLSETKGEVENVMKATGKTPIAHMHDLGLF WNTTLAAHCVHVTDEDMAIMAENNVAVAHNPQSNLKLASGIALVPEMIAKGITVGLGTDG SASNNNADMLEEVRLAATLHKARLYDPKAIPAQAAWNMGTVEGAKALGYTDLGVLAKGYR ADIVLYDVSGMHWMPRYNDLAALVYSANSSDVNTTIVGGKVLMKDKELLTIDEEKLRAEI DKAQVYFSN >gi|292596544|gb|ADCV01000004.1| GENE 12 10322 - 11566 1505 414 aa, chain - ## HITS:1 COG:PAB1372 KEGG:ns NR:ns ## COG: PAB1372 COG0499 # Protein_GI_number: 14521701 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylhomocysteine hydrolase # Organism: Pyrococcus abyssi # 5 410 10 415 422 504 60.0 1e-142 MQSLIRDINLATEGRKKIDWVSNFMPTLNTLGDRFEAEQTFKGQTIVVSVHLEAKTAYLA TVLKRGGADVIVTGSNPLSTQDDVAAGLVDMGITVYAWYDCTDEEYFNFLHKALDHKPHI IIDDGGDLVNLLHTTRQDAKERLLGGSEETTTGVHRLYALENAKQLTFPMIAVNDSYCKY LFDNRYGTGQSVWDGIMRTTNLTVTGKNVVVAGYGWCGKGVAMRAKGLGAHVYVTEVDPI KAIEAVFDGFKVLPMIEAAKVGDIFCTVTGCKDVIVKEHYKVMKDKAILCNAGHFDCEVN VSDLTELAISHERVRQNIEGYTMSDGRKLYVLAEGRLVNLAAGDGHPAEIMDLSFAMQAL AAEYILKNGKEMDPKVYVLPHELDVEIAKLKLNSMGYDLDSLTQEQIDYLTKVN >gi|292596544|gb|ADCV01000004.1| GENE 13 11766 - 12830 1267 354 aa, chain - ## HITS:1 COG:TM0911 KEGG:ns NR:ns ## COG: TM0911 COG0182 # Protein_GI_number: 15643673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family # Organism: Thermotoga maritima # 4 350 8 343 343 319 52.0 4e-87 MINIEWRKDTLVLLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILA AMEAGRLEAPFSEQLTSLYEFSEILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVV ELITKEAIIIHEEDVSLNRRMAEAGFTLFEGKKNIRILTHCNAGALATGGLGTALGVVRK LHENGQLERVYADETRPLLQGARLTAFELHEDGIPITLETDNMAAYAMQHGLIDAVIVGA DRITTKGDVANKIGTYGVAVLAKFHNIPFYVAAPYSTFDFTLENGGDIPIEMRNDDEVTA LHGVQIAPSGIGVLNPAFDVTPHELVTAIITEEGVLTPNYEESIGKLRQIVESK >gi|292596544|gb|ADCV01000004.1| GENE 14 12873 - 13667 1031 264 aa, chain - ## HITS:1 COG:PH1143 KEGG:ns NR:ns ## COG: PH1143 COG0005 # Protein_GI_number: 14590971 # Func_class: F Nucleotide transport and metabolism # Function: Purine nucleoside phosphorylase # Organism: Pyrococcus horikoshii # 1 244 1 248 265 274 54.0 1e-73 MSAIGVIGGTGVYDPSIFENIHEESLMTPYGEIDYVQGTYHGKTVIFVARHGKDHTIPPH KINYRANIWGLKKLGVTFIISTTAVGSLNENFKPGHFVLTDQFLDFTKNRITTFYEGGDR PVAHLDVTNPYCPELRDILQKVGTEQGLTIHNGGTYVCTEGPRFETPAEIKMFHMLGGDT VGMTNVPEVNLANEAEMAYATISMITNYAAGISESALTHAEVVEMMGNMAAQLKSLILGA IDAIDVDVRYDAHNRMHEYGGFKL >gi|292596544|gb|ADCV01000004.1| GENE 15 13777 - 14655 1217 292 aa, chain - ## HITS:1 COG:SA0470 KEGG:ns NR:ns ## COG: SA0470 COG1281 # Protein_GI_number: 15926189 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Staphylococcus aureus N315 # 2 281 4 285 293 222 39.0 6e-58 MDYIKRFTTREGVRMSLAVTTDTVETARVRHDLWPVATAALGRAMTGAILLAGDFKNHEN VSLRIKGDGPLGVVHVDAFSDNTVRGYVDEPHVDVPLKHAGKLDVGAAVGHNGEVQVTRF TQLAQDYTSTSPIQSGEVAEDLAYYLYASEQVPSTISLGVLVDPDYHTVVAGGFIVQALP DATDEALAQVEKNINELGPITEYLKANPDGKGLMERVLDGLTVNEVYNEPIHFQCRCGRD RFASVLMTLREEDKNAILEDDVTELVCHYCNEKYHFTREELQNMFTQKGPIQ >gi|292596544|gb|ADCV01000004.1| GENE 16 14851 - 15312 810 153 aa, chain - ## HITS:1 COG:FN1505 KEGG:ns NR:ns ## COG: FN1505 COG0054 # Protein_GI_number: 19704837 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Fusobacterium nucleatum # 1 153 5 157 157 208 68.0 3e-54 MMVQEGNLLGTGKKFAIIGSRFNEFITSKLIGGAEDCLLRHDVKQEDITVIWVPGAYEIP LIAKKAALSGRYDAVICVGAVIRGATTHYDYVCNEVAKGIAHVSLETGIPVMFGVVTTEN IEQAIERAGTKAGNKGYDCAMGAIEMVNLIDQI >gi|292596544|gb|ADCV01000004.1| GENE 17 15382 - 16584 1579 400 aa, chain - ## HITS:1 COG:all3536_2 KEGG:ns NR:ns ## COG: all3536_2 COG0807 # Protein_GI_number: 17231028 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Nostoc sp. PCC 7120 # 213 398 8 195 224 242 59.0 8e-64 MSEQLHSIDEVLQDLKAGKPVIIVDDESRENEGDLVIAAEFATQENINFMVKYARGIVCT PMRREALEKLGIPAMVTKNTDNHETAFTVTVDHVDTTTGVSPAERAYTIQKLLDPNAKPQ DFRRPGHVFPLVYKEGGVLVRQGHTEASIDLCRLAGLQEAAVICEITKDDGNMARLPDLM KFAKEHDLKIASVAELIEYRKQHEDMVELGACSKLPTKFGDFNIFVFKNELDHKEHLAIV KGNVQDCSDVLVRIHSECLTGDVFGSKRCDCGEQLDNALRAIEKEGKGVVVYMRQEGRGI GLTNKIKAYALQEQGLDTVEANEQLGFPADMREYSLAAQIIRFLGIKSIRLLTNNPEKRH GLEHWGINVTSRVPLIIAANKFNAGYLKTKEEKMGHMLED >gi|292596544|gb|ADCV01000004.1| GENE 18 16600 - 17256 813 218 aa, chain - ## HITS:1 COG:SP0177 KEGG:ns NR:ns ## COG: SP0177 COG0307 # Protein_GI_number: 15900114 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Streptococcus pneumoniae TIGR4 # 1 217 1 211 211 202 48.0 5e-52 MFTGIVEEIGRVESIKKGPKSLAITIRGEKIFSDLKIGDSVAVNGVCLTATTIGNGVFTA DVMPESIKMTTFTNLKVHQPVNLERAMLANGRFGGHIVAGHVDGTGRIINREQTDNAIIF TIEAPKSVMDYVIYKGSITIDGISLTIMRRTDSSFSVSIIPHTLSETILGSAHIGTEVNL ETDIAGRYIRHFITLGSEPTEEKPKKSMQSLLVENGFI >gi|292596544|gb|ADCV01000004.1| GENE 19 17237 - 18448 861 403 aa, chain - ## HITS:1 COG:FN1506_1 KEGG:ns NR:ns ## COG: FN1506_1 COG0117 # Protein_GI_number: 19704838 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Fusobacterium nucleatum # 3 143 6 146 146 190 65.0 5e-48 MDDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAG DNAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGMELLREAGI KVVCPVCSDECAELNEHFFTYIQTGKPFVTIKSAMSLDGKIATSTGQSQWITNESSRRDG HVLRATHDAMLVGIGTILADNPQLNCRLTDSELSDALLDKSILDEPITIHQPDVIILDSL GRTPTTSRVFEINNRKIHIFVSKGCPKDRIQVLEQVGAQVTVVESISTRKSKSTDIVIDI KKLSIDDILTKLGELGYTSILVEGGSAIISSFVETKNFDKVVTYIGNTIIGGNDATPAVG GRGFESLEVSPQLTFTKTKVLDNNIRIEAYRQGRRGAYVHGNC >gi|292596544|gb|ADCV01000004.1| GENE 20 18928 - 20670 2347 580 aa, chain + ## HITS:1 COG:YPO1358 KEGG:ns NR:ns ## COG: YPO1358 COG0028 # Protein_GI_number: 16121638 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Yersinia pestis # 3 575 2 573 573 682 57.0 0 MAKKRISDVLIEVLANAGIERIYGITGDSLNSVNDSLRRNGKIAFEHVRHEETAAFAAGA EASLTHKLTVCAGSSGPGNLHLINGLFDCHRNRVPVLAIASHIPQSEVGLNYFQETHPEN LFKECSCFCELVSNPKQMPEFLFRAMNAAVGNQDVAVIVLPGDVAVMEMEIDELPVWNPP RLPHIVPQREDIEEMAAHLETGKRITLFCGAGCEGAHDEVVELAKRLQAPVVHAFRGKEW VEWENPYDVGMTGLLGYTSGYRAIEQCDTLVMLGTDFPYRPFYPENAKVIQVDRDPSALG RRVPLTQGIIGTVKDTLKELLPLVGQRGDTEFIDTVRKAYTKFRADLDSYAVAEPDGVAI HPQYFVNRLNKLAAEDAIFTFDVGTPVIWTARHLKTNGKRRILGSYNHGSMANAMMHAIG AQNACPNRQVISLSGDGGFTMMMGEMLTLKQLNLPVKIFVFNNEELSFIAMEMKASGYLD YATDFVNPDFGKLAEAAGIKGVSIHNSSEVDEKIMEALNHNGPVIVNVRVDKQELAMPPK IAYQQAKGFSKYLINAILDGRGTELKEMAKTNWMKYKSLY >gi|292596544|gb|ADCV01000004.1| GENE 21 20767 - 21225 147 152 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0956 NR:ns ## KEGG: Vpar_0956 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 152 1 152 152 273 98.0 1e-72 MRVPIYEALAHYKKNEELPYTEYFSLGFFSDISLAEEALVESKILSGFSKLNDDSFSIKT HYLNDCSHISNQVSYEIINNKIYGVWYDYDINPYYSSSGYIGLFSTLEYAEKALKWYKTW DIFKVYGLDCLGIDTITLNLRGWTEGFITVYD >gi|292596544|gb|ADCV01000004.1| GENE 22 21271 - 21480 258 69 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0957 NR:ns ## KEGG: Vpar_0957 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 58 1 58 69 81 100.0 1e-14 MIEQLQNHADEIEFWEIEPEDTIELEESDIPGVYINEFMEYVDEEGNVLSPSEVDAIRYK DDYEDDYYR >gi|292596544|gb|ADCV01000004.1| GENE 23 21608 - 25399 4433 1263 aa, chain - ## HITS:1 COG:CAC3442 KEGG:ns NR:ns ## COG: CAC3442 COG2176 # Protein_GI_number: 15896683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Clostridium acetobutylicum # 426 1263 619 1451 1452 937 53.0 0 MKVRYRVVPKQNKKSSFYVNCHSQHVTIQAADSAFSTLLSLRERLSAWYKEKNISFDDIP TNTDTACCFAWKVDTETGEGLDTYYYGGGCGAGEWIEAAEAQREAEEAKNQEPRGKSFVG YDQQDEYDDVDEDDFAPFVEAIELGYFNNSPVVVSRSNHTAAESSSSDTIASVSSTPKVS KGFGPKKNTKSTAKGSEGDGKYPRRAPKDAPTDEGMILGPKIEGVTSKIMGTLDTPSVIF EGVFVGLDKRDTKTGKSIVNGSIVDDTNSIKFIKFTNSPEEGDELLKQLKGLQRVRVQGS VSFDDRFDKDYILSIRSIEAIETTSVERTENRPDSRVELHLHTKMSDKDALVSVKDLFKT IKKWGHPAVAITDHGVVQAFPEAQALGKELGVKVIYGVEGYLIEDETVIKDEEPVLDKKK KKEKDKRYHIILLAKNMVGLRNLYKMISISHLEHYKVRPRLPRSVIEEHREGIIIGSACE AGELMQSIVRGATKEELLEVASFYDYLEIQPHTNNTFLVRKGLMPDEQALIDMNKTVIEL GEALNKPVCATCDVHYLTPEEKIYREIMLTACGYPDADEQPDLHLRTTDEMLASFPYLSE EKAYEVVVTNTRAINDSIEDIKPVPDGTYSPKIEGADEAFTEMCYRNAKAIYGDPLPRVV QERLDYELDCIISNGYGVLYYIAHKLVKKSLDDGYLVGSRGSVGSSFAATMSEITEVNPL PPHYVCPNCKYSEFFEKGEYAGGFDLPRKDCPECGHALQTNGHDIPFAIFLGFEGDKVPD IDLNFSGDYQAKAHKYTEELFGRDNVFKAGTIGTIADKTAFGYVKKYAEIRDIQARNGFF EHLAKGFTNVKNTTGQHPGGIMVCPRDMDVHHFTPIQHPANKKESGVLTTHFDYHSIEGR MTKLDILGHDDPTIIRMLEDLTGIDAKTIPFDDPKTLSLFSSTEGIGLTPEQLQGDQVAS LAVPECGTKFVRGMLEDSRPQTFSDLVRISGFSHGTNVWLDNAQDLIKNGTCKLNEAIST RDDVMNFLIHRGMDRKHSFFVMENVRKGKGIEKRNKQGQATTEFEAEMRKNNIPEWFIES CKKISYLFPRAHAVAYVMMAFRIAWFKVYHPLAFYAAYFSIRAKAFDLRIMTGDLKTQLT EFNRIKALDRAASPKDKDLMSALEVSMEMYQRGYRFINVDIQHSEARRFSIKDGALLPPF LAIDSLGETVADAIVEERNERPFTSLKDLQRRCKVSNTIIDLMKDLKCCGELPEDEQMSL FGA >gi|292596544|gb|ADCV01000004.1| GENE 24 25402 - 26379 728 325 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0959 NR:ns ## KEGG: Vpar_0959 # Name: not_defined # Def: DNA polymerase III delta # Organism: V.parvula # Pathway: Purine metabolism [PATH:vpr00230]; Pyrimidine metabolism [PATH:vpr00240]; Metabolic pathways [PATH:vpr01100]; DNA replication [PATH:vpr03030]; Mismatch repair [PATH:vpr03430]; Homologous recombination [PATH:vpr03440] # 1 325 1 325 325 646 96.0 0 MAHIQLIYGDEPQLIEEEKRKFLSAYPDIPVTVLDDEAGPQKISEKLCEDSLFGDQKVFC LVNLPIIRKSGKNSDAWVPLYELIMEYDGDNPIVLIYHDMIDKRIKQNKEILNKIPNREC KRLEGADLVMWIRQYCTSNGFKMTPDAQEYVAHLIDLWQEVPVSFMRTEFDRYFLQITGE KVITKEFLEENGSDYGAKNIFTFKEALLKKDIDTLLELFPFMFGYKELDRAMSYIEGQLR LQLLVSECRQAGMSVQAIQNLCKDYDSSFKPYPIKLAYEASPRISIKALRALLKGLYEII LDSRGSKGDIWRFRDLCITYCGYKG >gi|292596544|gb|ADCV01000004.1| GENE 25 26391 - 28292 643 633 aa, chain - ## HITS:1 COG:all1983_1 KEGG:ns NR:ns ## COG: all1983_1 COG0658 # Protein_GI_number: 17229475 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Nostoc sp. PCC 7120 # 163 442 249 529 612 102 29.0 3e-21 MGLSYYHTDLQIINYSSYTSYYLQQEGEYLGTVVSSPEIVNLDGQEYYKYNVELHGLHPY KDSAKNDYIKAQGRLQIYSKVSATKYSIRLGEQAIIEGTPKSLFLIEEEGRINLRGRYMS SNTRGRIYDGVYRSATNKDLQAFHFKETFSEKLYGKSLYLCGQIRESIEKNIASNLDGPQ KVLAQALCLGGHYSELGEKRMKDFAYTGLIHILSISGSHIALLLALIYGLGRLVKLGKRT CLILGILVACIYCCIVGGDAPVIRATMMSILMCMAYVKGRLYQAKQALCICAILCLVYDP FSLFDVSFQLSFGATYGLLIWGKVLYERIQWLPKWIKTPLVLCVSAQLLILPLQLYYFHY ISIASLLAACIVAPILDISIILIFISTVISYVMSISFLWSLIDALLRISLYLNHVLGRSG SLLWLGMMHLYCVYVYYALLGLFTYFLTHKKKYTVYVVMSLLCMVTAYGVSYYVTHHHKN TLIHYIPMKQCNVLLCIAPNHEQADLLIDAPDYIKTMPNERLINQTIRAYGINPKMVKVK YFHSNGASSVVYKNGMNQIVVYNGQSREKNLKLNDKTNVLYITSRSSVMREISRISPRSA VLFSSPHGALRDVDPSTEHMYIMGYSYIKDIYL >gi|292596544|gb|ADCV01000004.1| GENE 26 28576 - 29145 435 189 aa, chain - ## HITS:1 COG:lin1519 KEGG:ns NR:ns ## COG: lin1519 COG1555 # Protein_GI_number: 16800587 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Listeria innocua # 4 189 7 199 200 84 33.0 1e-16 MKVKLKPYMTIILILCVLVGIYFLWPIITDESDSVLVEGAIDGNSSISTVEQTSNKPIAY ITGAVVSPGLYEFESSATVGDVVQLAGGLLPYADVESVNMAKSVNAGDHIHIVFNFHGNP EVLLRGNKININTASAKDLDALPGIGPAMAKRIEEYRSQKGPFTSVEGIKGVKGIGDGVF KKIKDKITI >gi|292596544|gb|ADCV01000004.1| GENE 27 29257 - 30486 1265 409 aa, chain + ## HITS:1 COG:BH2245 KEGG:ns NR:ns ## COG: BH2245 COG2309 # Protein_GI_number: 15614808 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Bacillus halodurans # 3 405 5 406 410 333 41.0 5e-91 MNQETLKKYAHTLLKYGVNLQEDQTLVISVDVENKDFAVIVTEEAYELGAKEVVLNWRCS PIARQRLLHAKESVLQRPANWIPEFYKQYIDDKAAFLSLISANPKALEGIPTNRISLQSR NLNKALSFYHTAIMKSSVTWCVASVPTVLWADLLGYEGTDEEKIEQLWATLLKLCRIEGV EPKDTYRHHMAKLRHRCEALNKLDLKALRYTCKNGTDLLLELPEGHIWLGGEESSKDGTI FNANIPTEEVFSAPQYNGVNGIVYSTKPLIYHGNTISDFSFTFKEGKIVDYTAKEGYEVL KELIETDEGSHYLGEVALVDHFSPISQSNQIFYETLFDENASCHLAIGASYPTCLKNSDG LSEEELKERGLNYSLTHVDFMIGDEHMNIKGYTRDGQEVDIMIDGRLQV >gi|292596544|gb|ADCV01000004.1| GENE 28 30647 - 31126 513 159 aa, chain - ## HITS:1 COG:FN1902 KEGG:ns NR:ns ## COG: FN1902 COG2131 # Protein_GI_number: 19705207 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Fusobacterium nucleatum # 4 159 15 170 174 168 54.0 4e-42 MAKRSDYISWNEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDF TWERDTADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIY RDDLYKDTKEVKASKRMLKTAGVDIIEYKSTGRTLNITL >gi|292596544|gb|ADCV01000004.1| GENE 29 31202 - 33670 3031 822 aa, chain - ## HITS:1 COG:TM0168 KEGG:ns NR:ns ## COG: TM0168 COG0495 # Protein_GI_number: 15642942 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Thermotoga maritima # 3 821 2 824 824 951 54.0 0 MNEKYVAQDIEKKWQQYWEDNHTFKTEYDESKEKYYVLEMFPYPSGNLHMGHVRNYSIGD VVARFKKMKGFNVLHPMGWDSFGMPAENAAIKHGIAPKTWTLDNIENMKLQQKALGLSYD WDREVATCKEDYYKWTQWFFQQFYKKGLAYKKEAKVNWCETCHTVLANEQVIDGVCWRCD NPVEKKDLSQWFLRITEYADRLLTDLDTLDHWPQRVKLMQKNWIGRSEGTEFSFEVPSIN ERVSVYTTRVDTIYGVSYVVLAPEHPYVERIIENAPNKAELEAFITRMRNMSDIDRTSTE APKEGMFTGSYAVNPMSGEQVPVWIANYVLVDYGTGAVMGSPAHDERDWEFAHKYDLPIK QVVACEGEEYSLEKWQEWYHEDGILVNSGDYNGQTSAEARKNITASLNERGIGEGKVNFR LRDWLISRQRYWGVPIPVVYCEKCGEQLVPEEELPVRLPENVKFESGAVSPLATSESFLN TTCPKCGGPARRETDTMDTFIDSSWYFLRYADAKNDQAPFDKKIANYWMNVDQYIGGIEH AILHLLYSRFFVKVIHDLGLIEANEPFRGLLTQGMVLKEGSKMSKSKGNVVSPEEIINTY GADTARLFILFAAPVDRDLDWSDQGVEGSYRFLGRVWRIIDAYNEEAKKNVTGELTKDEF GLRRELHRVIKKVTEDLDNNFNFNTAISAIMELVNAMYAHKDKAETINSALANELTRSLL LLLAPFVPHITEELWHELGEATSIHTENWPVYEEAALVVDEVEVVLQVNGKVRDKLTVSV NITKEELETLAKESSRVQEFIEGKNIVKVIYVPGKLVNIVVK >gi|292596544|gb|ADCV01000004.1| GENE 30 33761 - 35443 1632 560 aa, chain - ## HITS:1 COG:CAC1556 KEGG:ns NR:ns ## COG: CAC1556 COG3858 # Protein_GI_number: 15894834 # Func_class: R General function prediction only # Function: Predicted glycosyl hydrolase # Organism: Clostridium acetobutylicum # 150 437 158 443 446 110 29.0 5e-24 MIRKSTIIKSLTALVMSALSSTIVQAEVLVPLDQFLATTTRHYEANQYKTAYTVYIPQSE LQGDTVILNPAAVGEPVKLPITKKDGISYVDIESEPAMLGVSYTKNNGQLILGPAPEAST VKAPYTLQTPLAWAFDPWTTEGIPYQAKLNTSGDNIISPSWFKLHSLGLEASSNVNIDYV KAYKDKGYHIWPLITNRFDSNFTSGILSDQSVWKKFAHNLVQYAYIYGFDGYNFDFENIN YADRDRLTTFVTYLSNHLHQYNIKTSIDVTGYSDSPEWSLVYNRKALADTVDYVVLMAYD ETWAKSTTAGPVASYPWVRSHTERMLSEVPSQKLILGVPFYMRLWHETNGYAKSETLAMK NTSNYFANYRDKMTWDDRLKLYYLSIPTASGSDRIWFEDNTSLGLKLDLVKELHLGGFAA WRKGFEDISTITMIQEKDLGRGIPKSPTAVVPEPVVQEAKPLTKLEQYKLRLEEKEKEKA AKAEAKRKAKEEKEAAKRKAKEEVEKVKAEKKRLEEEAKARKEHNKQTVKEQNDLYTSHS SDQNTSPKNDLIKTIQVVKR >gi|292596544|gb|ADCV01000004.1| GENE 31 35601 - 36425 1070 274 aa, chain + ## HITS:1 COG:all4699 KEGG:ns NR:ns ## COG: all4699 COG0682 # Protein_GI_number: 17232191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Nostoc sp. PCC 7120 # 8 268 19 281 283 122 32.0 6e-28 MHQYLFFIGDFPIRAYGTMLALAIICGASVAYVLLKKDGRGWHEHIIDFSITVAVAGLIG ARLWDVFFFDWDYYGNHLLEIPFVWQGGMAIQGGVVLGTIAGYWYLRKNKIDFWAFADLF APALILAQSVGRMANLLNGDAFGHPTGGNYGIIYPESTLAYRTYGNQPLWPAEVWEGQID ILIFVALLLFGSFKHAKGQVFVLYAILYSTARFFLEFLRGDYVNLTLGLKSAQMTSLIAI IVGICVFIYLGYLEKKNQAVIVATESTTKTKKRK >gi|292596544|gb|ADCV01000004.1| GENE 32 36534 - 37850 1547 438 aa, chain - ## HITS:1 COG:lin1315 KEGG:ns NR:ns ## COG: lin1315 COG1206 # Protein_GI_number: 16800383 # Func_class: J Translation, ribosomal structure and biogenesis # Function: NAD(FAD)-utilizing enzyme possibly involved in translation # Organism: Listeria innocua # 4 433 3 428 434 551 62.0 1e-156 MNHKNVIVIGAGLAGSEAAWQLANRGIHVDLYEMRPVKSSPAHQTDQFAELVCSNSLRAG NIENAVGLLKEEMRRLGSIIMECADATAVPAGGALAVDRHLFSEMVTKKVKGHPNITVHL EEVTELPTEATVIFASGPLTSEALGDKIKALTGETGFYFYDAAAPIVTAESLNYDKVFAA SRYDKGDADYLNCPMTEEEYKAFWHELTTAEAVQPKDFEKEIYFEGCMPVEIMASRGEDT LRYGPLKPVGLVDKRTDEESYAVVQLRKENKEGTMFNLVGFQTHLKWGEQKRVFGMIPGL ENADFIRYGVMHRNTYINSPELLNHAFQLKKEPRLFFAGQMTGVEGYLESAASGLMVGLQ VDRYLEEQPFIEFPKTTAIGSLSHYISNYEGSNFQPMNVNFGIMDPWPQKVRKKKEKNAL IANRALEELDALKAKENL >gi|292596544|gb|ADCV01000004.1| GENE 33 37840 - 40215 2896 791 aa, chain - ## HITS:1 COG:BH2467_1 KEGG:ns NR:ns ## COG: BH2467_1 COG0550 # Protein_GI_number: 15615030 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Bacillus halodurans # 75 618 5 550 550 577 53.0 1e-164 MSIKRSIVIGEPKAASTSNDTKKKNTKKESTTIKRKVAKEALTPMGIVRDKSVLQTSVPP EQREPRVYNPDGKVLVIVESPAKSKTIEKFLGPNYVVKASMGHLRDLPKSQMGIDIEHDF TPRYSNLVTRKKVIDELVSYADESSAVLLATDPDREGEAISWHLAYILNVDPTSTCRITF NEITKNAVAEALGSPRTIDMNMVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSV AVRLICEREREIQAFVPQEYWTIEGNFETPKKEAFTAELTHIKGEKIDITTESDAQAIVD AIGNEDAVVTNIEKRKRSRKAAPPFTTSTLQQDGVRKLNFGAKRTMMIAQHLYEGLEIGS YGHVGLITYMRTDSTRISKEMQAMAKDFILRNYGEDYYPSKPNVYGSKGSAQDAHEAIRP TSLELTPKMVEPFLSRDELKLYTLIWNRFMASQMAPQLNESTTIELNVKDDYTFKATGSR VIFPGFSTVYEDAKKEDVPQLPVLKKNDAAHTVEVLPEQHFTQPPPRYSEASLIKTLEEL GIGRPSTYAPILDTIVSRNYVENTNKQFVPTELGFVVVDFLIAYFEKIINTGFTRDLEEE LDAIASGKDTYVKVLSDFYEVFAQELEDASDVDRIEIASMESDEICELCNSPMVYKFGRY GKFLACSNFPECKNTKPITVGTGVTCPKCKEGEIVERKSRRGRIFYGCNRYPQCDFTLWD KPTHDFCETCGSIMVEKTYKNGTVKKFCSNETCPTRPPKKTRKKKSEASEETVKESKKSS KAKKEETTIES >gi|292596544|gb|ADCV01000004.1| GENE 34 40205 - 41431 535 408 aa, chain - ## HITS:1 COG:SP1266 KEGG:ns NR:ns ## COG: SP1266 COG0758 # Protein_GI_number: 15901126 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Streptococcus pneumoniae TIGR4 # 75 297 67 286 286 181 44.0 2e-45 MIRYDDNIYIAGLQSLYNVGATYVRRFIEDFGSPYDAWQAIKNVKNLKSYTHISASDKRA ISTSAKDEKLDYIIHKVDEYQMDFTTFLDKDFPSILNHIYNPPAILFMRGNRALLDGRLN RIAIVGARSCSLYGRNVARMLGKELGKYSTIIVSGGARGIDSHGHEGLLASQGYGIIVMG CGLDITYPRENAKLFDRMLQNNGLLLSEYPPGTPPSAKHFPARNRIISGLCRGVIVVEAK SSSGSLITADMAVSEGRDVFVVPCNLLDHTADGNKFLMRNGAYVLTGYEDIVEQYHLTLR EYFSSEQKFLPTRNNENKGVKDSVQIGNHSQSVDRKGCSMLSFNVDRSVILSEIPHDRCI TVSDILKATRIPLQQLQPLLLELEMEGAIENHPPRGYINMTRSDILVH >gi|292596544|gb|ADCV01000004.1| GENE 35 41538 - 43235 1171 565 aa, chain - ## HITS:1 COG:alr4088 KEGG:ns NR:ns ## COG: alr4088 COG0606 # Protein_GI_number: 17231580 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Nostoc sp. PCC 7120 # 1 563 1 504 509 393 38.0 1e-109 MYAKLYGATLHGIDGCIITVEVDISQGLPVFDIVGLPNQSVKEARERVRAAIKNSGYEFP MRRIVVNLAPATIRKSSAGLDLAIALGILLASGQIKGRKAKISALFDKSLFMGELALDGS LLPTFGTLAMSLAGLDANYSKVYTSIENSKVLQAIPNLTIYGGSSLQEIITILEEQAKPK VVDKNKQISIKTEHVDKHNINKSTLESMPLTGTNENLYTMSKQHVSAISNSCVDTSVTDE SITIKTIQTYTVDFGDVQGQELGKRAMLISAAGHHHCIMIGPPGGGKTMMAERLPTILPP MNWNEIVEVSRIQDVIGLLGDNGLVTSRPFRHPHHTATLASMVGGGIQGRPGEVTLAHGG VLFMDEAPEFQRQVIDALRQPLESRTITINRAQGNYIYPANFICILAANPCPCGYYHDPH KECVCTETMVKNYQQRLSGPIMDRIDLHIPVERPTLEQLLDTSTSNMTSESMRQQVIMAT AMQQKRFEGFDFNSNGAVPHKAISELCNITDKAWSVLGNIFDHFHLSGRAFDRILKVART IADLEENPKVEPHHISEAMLFRTGK >gi|292596544|gb|ADCV01000004.1| GENE 36 43248 - 43646 373 132 aa, chain - ## HITS:1 COG:MT2966 KEGG:ns NR:ns ## COG: MT2966 COG0792 # Protein_GI_number: 15842441 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis CDC1551 # 17 115 24 121 141 71 38.0 4e-13 MKTISTGKAFNELDSKELGKWGERVATNYIEKMGLTVVDTNYRTRLGEIDIIAKRDLVYH FIEIKARRGMQHGLAREAVTKKKQKHIKRAAMLFLYDLNQKKRRWKEISFDVIEVYLHED FQSSIHYLPQCF >gi|292596544|gb|ADCV01000004.1| GENE 37 43942 - 44739 1006 265 aa, chain - ## HITS:1 COG:BH2475 KEGG:ns NR:ns ## COG: BH2475 COG0164 # Protein_GI_number: 15615038 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Bacillus halodurans # 8 256 4 254 263 206 48.0 5e-53 MDKDIFSKLKVADIKALFQTEQALEILSFAQEDTRSSVQKLAASYIKRQEKELKEQQRLM GMYDYEGMFYDQGIYHVAGVDEVGRGPIAGPVTVAAVILPPMTLIPGLNDSKKLTEEKRE ALYDIIMDEAVAVSCIFYGPEKIDELNIYEATRQAMYEAIRTLSVPAEAVVADAMKLPDL RIPVESIIKGDSKSANIAAASVIAKVTRDRYMKSLDDEYPGYGFGIHKGYYTELHKEAIE QQGVTPLHRKSFEPIKSIVRWVKSE >gi|292596544|gb|ADCV01000004.1| GENE 38 44732 - 45637 1229 301 aa, chain - ## HITS:1 COG:BH2476 KEGG:ns NR:ns ## COG: BH2476 COG1161 # Protein_GI_number: 15615039 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus halodurans # 7 283 3 278 284 283 50.0 2e-76 MADSPIVHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVILELVGQKPHIVL LNKIDLADPKATKEWTEFFTKQGITVLAIDSKSGKGNKKLLSTVERLSKPIIDRWVAKGI RSRSVRTIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVL WPKLEDQRAAARLAMTGAISDDVYDLEHVIKQLLNYLLTNTPNILVERYKLKEEEMTDVD TILESIGRRRGCLVSGGIVDFDKARRIILQDYRNTKLGTITLDQVDEEPYYPADGEESHN G >gi|292596544|gb|ADCV01000004.1| GENE 39 45822 - 46163 561 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371193|ref|ZP_03854677.1| LSU ribosomal protein L19P [Veillonella parvula DSM 2008] # 1 113 1 113 113 220 100 1e-56 MNIINVLEQEQLRTDIPTFRAGDTVRVHVKVVEGTRERIQVFEGLVIKRQNGGVRETFTV RRIASGVGVERTFPLHSPRLAKIEVMRRGVVRRAKLYYLRNLTGKAARIREKR >gi|292596544|gb|ADCV01000004.1| GENE 40 46317 - 46709 308 130 aa, chain - ## HITS:1 COG:L114370 KEGG:ns NR:ns ## COG: L114370 COG1846 # Protein_GI_number: 15672690 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 18 123 38 142 291 57 31.0 9e-09 MIMNHDELYKALCKVPSGKEKSRDRIIIELYMRSQGASQKQLVDALNMRPATVSEQTDIL IELGYVTKHIDYMDKRISVVTLTDEGKRLGKTLLHTYNEFLNVMFSDLSDEEQENLYRLL GKLKRPIIRK >gi|292596544|gb|ADCV01000004.1| GENE 41 46870 - 48921 2970 683 aa, chain - ## HITS:1 COG:BH1371 KEGG:ns NR:ns ## COG: BH1371 COG0751 # Protein_GI_number: 15613934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Bacillus halodurans # 3 666 4 674 693 493 41.0 1e-139 MAKDLLFEIGAEEIPAGFMPNILGQLKQLAETKLNDAHLPFESIATYGTPRRLALIVKGL ADTSAEISERHKGPSASIAYDADGNATKAAIGFARGKGLDVADLVVEDGYIYAETKTAGV PAKDIVTDMLPQLITGLNFPKSMHWGNLDAKFVRPVRWLVALLDEEVIPVEFATVKSGNV TRGHRFLGADEITIKNAALYVDTLKENFVMVDQDARRELISKQLHDIAASKNASIVWDDD LLEEINYLVEWPTALCGGFEESYLALPDAAIITPMKDHQRYFPLVDQDGKLLPMFLTVRN GSDHSIEVVQAGNERVLRARLDDAKFFFNEDRKKPIIDRQDGLTKIVFQEGLGNLADKTE RLLKLGRVFGEECGLQEDAAVVLERATELAKTDLTTGMVTEFTELQGVMGKEYALLDGES PEVAEAIFEQYLPRFAGDVLPQTEAGKVLSIIDKVDNIVATFSRGLIPTGSQDPYALRRQ TIGILNILLGSEWNISLRPIFKASMELLNVPAEKQDELLGQVEEFFTLRLKNIFLDREVP HHVIDLLLSNNELSVADAEGLVNALLANRIDENVELVQAYTRMYNLVKDVEYTGVNSDLL KEDAEKALFEAASKAFEASLAAWEAGDYAAVVAVPATLVPAINKFFEDVMVMDKDEAIKA NRLQLVRLAYNVMAIIGDISALK >gi|292596544|gb|ADCV01000004.1| GENE 42 48923 - 49798 1229 291 aa, chain - ## HITS:1 COG:BS_glyQ KEGG:ns NR:ns ## COG: BS_glyQ COG0752 # Protein_GI_number: 16079581 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Bacillus subtilis # 1 290 1 290 295 439 69.0 1e-123 MTFQEIILNLQKFWSDQGCIVQNPYDIEKGAGTMNPATFLHAIGPEPWSVCYVEPSRRPA DGRYGDNPNRLFQHHQFQVIVKPSPDNIQELYLQSLAALGILAEDHDIRFVEDNWESPTL GAWGLGWEVWLDGMEVTQFTYFQQVGSIDCKPVSVEITYGLERLAMYIQGVENVYDLKWN ENVTYGDVWHANEVEQSVYNFELADTDMLFKLFDMYEAEAKRVCEAGYVLPAYDYVLKCS HTFNLLDSRGAISISERTAFIGRVRALARICAQQYLAKREELGFPLLKGDK >gi|292596544|gb|ADCV01000004.1| GENE 43 50158 - 50607 207 149 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0978 NR:ns ## KEGG: Vpar_0978 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 149 1 149 149 206 82.0 2e-52 MSKKYLYYILTFIVSISILGIFSYSFRYQWFINSIVNQNHKLGLNRNIKGFAAEYPYIYT YGDYGILIINTLPNGSVKILPNYNGFTYIDGAYSIDDSSIQRLKNVYGDRLRIYSSIDDF TEDEQLIINEITNMQPKRFDKNDWLYKSI >gi|292596544|gb|ADCV01000004.1| GENE 44 50686 - 51051 213 121 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294793778|ref|ZP_06758915.1| ## NR: gi|294793778|ref|ZP_06758915.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 121 1 121 121 177 100.0 2e-43 MEKQIASIFFLLGFNYLMINSWGTRKGIFVALIGNYFLLSILIESYFGLPKFIEDFNALF MLVICILGTYNLWHKNKAGILTEYEKRGWILTRTFLVLFILAVLVFALIFIFMEYIYGIY I >gi|292596544|gb|ADCV01000004.1| GENE 45 51149 - 51247 100 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDLLFIFSIYYIVIFNGYFVLNLTLYVTKACY >gi|292596544|gb|ADCV01000004.1| GENE 46 51691 - 52629 299 312 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 5 300 11 310 317 119 30 3e-26 MSYIHLTIEKRSQIEVLRKERYSVRKIASLIGVHHSTVARELNRVKGEYSAIKAQQLAIS KSANKGRPTELTPQLAALIESRLQQTWSPEEVIGAELVDVLSFKTIYSWIHRGFLAVTEK VLRRKGKKPGTQETRGRFSVKRTIKERPQEVENREVFGHWELDTMVSSRGQSKGCLATFV ERKTRFYVAIKMNDRSKDSMFLAINSLYNTLTSKLLKTFTVDRVKEFACYEQVENKFGIP MYFADAYAAWQRGSNENSNGLLREFFPKKTDLAKVTLDKLTEALMLINNRPRKGLGFKTP FDMFKHEIRKLI >gi|292596544|gb|ADCV01000004.1| GENE 47 52738 - 53640 215 300 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294793780|ref|ZP_06758917.1| ## NR: gi|294793780|ref|ZP_06758917.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 300 6 305 305 486 100.0 1e-136 MISRETTLLKKNLYDLVHNTRVGKKAYIFMLIGLFSTYLVSNAIINNISVDYILMYYVRY IFKILGLGLTLELSRRRLHDSGYSGKWLWNWGAFASIIYAYYVYDIYSTEGLFLSFFEQI FLIEILIIFIPAVFLFFLPSEQCLNKYGDGNLQMISKVNSIGYLKSKISLDNDKGIIEYL LDIYFYRTFKPQGRSKIIETWIGIGTLGTIMSLLVTFVNILFTIKSETGIEILGTISIYL FYLLYAYTIFSILALFIRRLHDSLYSGFWVLLLLIPFANIFVFYRLLIKGSWDVNSLKEI >gi|292596544|gb|ADCV01000004.1| GENE 48 53630 - 60454 6763 2274 aa, chain - ## HITS:1 COG:NMB1214 KEGG:ns NR:ns ## COG: NMB1214 COG3210 # Protein_GI_number: 15677087 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Neisseria meningitidis MC58 # 35 1578 80 1695 2273 438 26.0 1e-122 MKQKRLQYKIAVWLTMGLMIVDPLVIPFVYAENPIEVDRNAPHERQAMIGQATNGVTLVN VVGPSAGGVSRNDYTNFNVPQNGVILNNSYQISNTKLGGYVPGNTNMMRGSANVIVNEVT SHNPTNMNGFIEVAGRKASVVIANPNGITVDGGGFINTDRAVLTTGKPEYDSSGNLNSYR VERGIVAINRNGLNAKEANSLQILTEAASVNAGVWANSIEARTGKNKIDANTLDTQKISN SNNIGLDVSAIGGMYANSITLKGTNTGLGVNVKGVVSSTQASNITSDGQIIVDGGVTSNG NIILDGQSIAIHSNGVVQGDSSTTVHSQEKVNNNGLINSGNTTTINAKSIDNNEGGRIYG DTVDIKANIVTNHTNSEIEERYHKAGKELEKAKNELDAEWNADISKYKTKPELEEHRQRI KDLTKAYDDVQEKVTAIKAELDSHKSGVIAGRNHVNITSDTIDNTGKGLIYSGGTMDFIA KDGIHNKGATIKATKSIKLDTPTVENNNVALGTKRVSDGITKNPDKIKVTHPNHKLEGQV FDKSEFPYADDSSGYGTPHVKPVKTPEDEAYNKEMNKNENRINQFTIIRSEAEQTHKKIT NDDPGIISSGGDLVTTGILYNDNSSVISGGTFKTKGSIQNISDMISDKTFITGTTQESRT KKKRKRHGYRSKRIRVWGPEVFMTPSITEENVKPIGTLKEHAEDKVSKATIAKVNDSLDP YGLGGGKGKASQTIDGLSLPTEALYDIHPAITANALIETDPAFTNRKNFLSSQFMIDALT NNPERRFKRLGDGFYEQQLINEQIVSATGKQYLEGYTDNEAEYKALLEAGVAFGKAFKLT PGIALSKEQMDAITTDMVWLETKTVIVDGKAQQVLYPKVYLAKQTAKSMDAMRGIISGKA IVSNTNTDILNQGIMTADTIVLGANDIENTGRIDGRKVTIKASQDVINTGNIHGEKRVNI NAGRDINVGAHVNRLQHHDIVGRQGTIGVGEKGDLVLSAKRDVNLKGAIVHTGDNSKATI EAGQNINLTTETLSAKKDMTVNSENYNRTDRRTELGTAILSDSNVNLQAGNDVNIRNGIV NSEHGVTSVEAGNDVTITNGQSYSRDEYGLKYKEKSLLSRTTNIIRTDHERTGVLSSTIG GDTINVKANRNVSVTGSNILGTKDVSVSAGNDVRTDSGEETQRDDVYQYSKKSGLMGAGI GFTIGSKKVTDTLEGNSKTNVNTLIGSANGKISIDANNKAHLTSTDIIGKDDIEVSASDI TLDGKHDTVASKQVHEEKQSGLTVSLGGSIASALTTARGLQRKANSRDDKRLGTLESLEA GKELKKGYSKIQEYKNFTPDFVRDEAQKSIASGILKEQKVKEIDSLLQNNKLTDKTRKAL EKERKRLAEEASYEKAKGYNDLNDINGDQKQYKENKRAKKDGLANIHVSVGSSKSRSESR LDSSKYAGGHIVSDNGIKLVTKPTTTDSGDILAIGETIRGESVELDASRNLSLQAGTNTT TITDKYDSKGWSIGVNLSVNGGGLLGIDANYNKAKENGTIVKTTHSGTVVQGKKVITNSG ADTNIVGSKVYGDSIQSQIGSDLTIKSLQDSETYRGEKKNVGFSISTNGTQLGGVSAEYS KGKMTSDYTSVTEQAGLYAGAEGFDITTKGNTKLEGAVIDSKAKADKNKLSTNSLTVEDI KNKAKYKSSNTGLSYTSVSGFKNLNQAGKGAVYNSLGLLPKLLPDSEKSVESTTKSVIAN GTITTESSNIDINKISKDTKNSLNKLDTIFDKKKVEERQELARLFAKDAFEQLHYWEPKT KEGKAAKALAHAVVAETSARIAGNPKRSGFYAGATNEALIGEIQKIAKSNPAVAQWLSAS LGALVNHGLGKSPITGATEAQYGTKYNRFYKRRATIPVAGYIKKKDQETLNMYGLGIKKS YNGISENVSTDSEEDESYVGAPYIVSTWADADTGMAYHTLSDGTVQPMNKTWGKVLEGRG YPTALGNDGAFYTGSDEVGWYYNPNPAFDSIKNDNLARAMLKNANDSVNIELARLRPGTE QSINAFGFTYKVRAGDEPNTVYRTYGFGKSLNLTDALKGAGVIKEAMGDTFVVNNSQRSG IGLLGISFETVNTPNNSDIDLKSSRLKLSHTGWGINNDVRLKKVEDLNLNIDRPDKVKNH TQYNLSDYTNYVPVGTEIEVSKTYKVKSDVSAEDERLVQQSVPNMNLNTRRARALEVLLR DQGKIYINRNNGDPYFVITDKYGQSQLYTSSGGFAYIKNSILKSDYYEEKSDDK >gi|292596544|gb|ADCV01000004.1| GENE 49 60486 - 62351 1137 621 aa, chain - ## HITS:1 COG:RSc0888 KEGG:ns NR:ns ## COG: RSc0888 COG2831 # Protein_GI_number: 17545607 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Ralstonia solanacearum # 137 616 102 585 590 287 32.0 4e-77 MKKRELLFCLSLVCMVPINILGAKPIDTQEQLDRAREQQLAREARLGEGRITVQTGGIDF SSGSLTSQDGYTVPAQQPAHVEPSFFVSHIRVVEEFISQSAELTYSNMINTTMDQTIFVD NSSAASVRLIKGPLYYEAQKKKIQLDVPNEFTFLRKTIKPFVNRKLTVKDINKLSTSLNT ALIEHGYVTSRIGIPSQSLASGNLQFNLQLGRVESVLYKTYAQPLPWQNAFPIREGDILN IRNIEQGIEQMKRIGSQNVSVELEPGTKPLATNIVLETTKKPPIHGMISIDDSGLKDTGK LQWTAAIGVDRVFNANDSLNLSINRDAAQDGERKGSRNHTISYSIPRGKDTFSISYSDMK YHQTINSMATPFISSSHAKTVRGSWNHVFHRDRTTKRSWDIIISKRNAKNYINDVEIAVQ RANTASLEIGISERRYIKKNTLYSRAAIKQGVGWFGSQPEYGNGAPSTRYTQLLLDVDYQ IPRIWGHRPASITTSFHGQWTLGDKRLFSRDMISLGNRYTVQGFDGENTLMAESGWYMRN EVASYILKWKSSVYANIDFGAVYGPSTEVLTGKFIAGTSLGIRGQFKSGLFYDVFVGAPL YKPSGYKTDSLTAGFQAGVRF Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:49:00 2011 Seq name: gi|292596543|gb|ADCV01000005.1| Veillonella sp. 3_1_44 cont1.5, whole genome shotgun sequence Length of sequence - 78238 bp Number of predicted genes - 76, with homology - 74 Number of transcription units - 26, operones - 18 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 11 - 142 152 ## COG1943 Transposase and inactivated derivatives + Term 257 - 296 7.4 - Term 304 - 365 16.6 2 2 Op 1 . - CDS 368 - 1732 1541 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 3 2 Op 2 . - CDS 1812 - 2273 720 ## Vpar_0982 hypothetical protein 4 2 Op 3 . - CDS 2266 - 3060 911 ## Vpar_0983 hypothetical protein - Prom 3102 - 3161 11.3 - Term 3185 - 3231 5.5 5 3 Op 1 . - CDS 3233 - 3937 752 ## Vpar_0988 DNA repair protein RecO 6 3 Op 2 1/0.000 - CDS 3924 - 5255 1368 ## COG1253 Hemolysins and related proteins containing CBS domains 7 3 Op 3 2/0.000 - CDS 5310 - 6209 1131 ## COG1159 GTPase 8 3 Op 4 17/0.000 - CDS 6202 - 6678 648 ## COG0319 Predicted metal-dependent hydrolase 9 3 Op 5 . - CDS 6681 - 7694 1188 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 10 3 Op 6 . - CDS 7703 - 8668 759 ## COG1242 Predicted Fe-S oxidoreductase - Prom 8714 - 8773 10.6 - Term 8716 - 8762 3.4 11 4 Op 1 . - CDS 8777 - 10492 1659 ## COG1032 Fe-S oxidoreductase - Prom 10581 - 10640 2.4 12 4 Op 2 . - CDS 10679 - 11095 542 ## Vpar_0995 hypothetical protein - Prom 11137 - 11196 6.9 - Term 11160 - 11225 17.6 13 5 Op 1 21/0.000 - CDS 11264 - 12712 2138 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 14 5 Op 2 31/0.000 - CDS 12709 - 14169 404 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 15 5 Op 3 . - CDS 14181 - 14471 480 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 16 5 Op 4 5/0.000 - CDS 14546 - 16549 2668 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) - Prom 16570 - 16629 4.2 17 5 Op 5 . - CDS 16631 - 18820 2343 ## COG0210 Superfamily I DNA and RNA helicases - Prom 18858 - 18917 3.6 - Term 18860 - 18908 12.1 18 6 Tu 1 . - CDS 18925 - 19866 1382 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase - Prom 19940 - 19999 8.5 - Term 19937 - 19994 11.0 19 7 Op 1 27/0.000 - CDS 20022 - 23204 3907 ## COG0841 Cation/multidrug efflux pump 20 7 Op 2 . - CDS 23219 - 24346 1475 ## COG0845 Membrane-fusion protein - Prom 24404 - 24463 9.9 21 8 Tu 1 . - CDS 24593 - 25210 405 ## COG3340 Peptidase E - Prom 25327 - 25386 6.6 + Prom 25510 - 25569 2.9 22 9 Tu 1 . + CDS 25626 - 25808 188 ## 23 10 Op 1 2/0.000 - CDS 25882 - 27057 1130 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 24 10 Op 2 . - CDS 27044 - 27772 729 ## COG1424 Pimeloyl-CoA synthetase 25 10 Op 3 . - CDS 27772 - 28272 603 ## Vpar_1007 hypothetical protein - Prom 28320 - 28379 8.4 - Term 28374 - 28422 5.4 26 11 Op 1 10/0.000 - CDS 28427 - 28897 533 ## COG0691 tmRNA-binding protein 27 11 Op 2 . - CDS 28906 - 31200 1432 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Prom 31262 - 31321 2.8 - Term 31285 - 31326 6.2 28 12 Op 1 . - CDS 31328 - 31564 293 ## Vpar_1010 preprotein translocase, SecG subunit 29 12 Op 2 5/0.000 - CDS 31570 - 32238 748 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 30 12 Op 3 6/0.000 - CDS 32318 - 32851 553 ## COG3688 Predicted RNA-binding protein containing a PIN domain 31 12 Op 4 7/0.000 - CDS 32854 - 33585 549 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 32 12 Op 5 8/0.000 - CDS 33587 - 34081 227 ## PROTEIN SUPPORTED gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 33 12 Op 6 . - CDS 34053 - 35501 1389 ## COG0215 Cysteinyl-tRNA synthetase - Term 35905 - 35976 1.5 34 13 Tu 1 . - CDS 35997 - 36950 1040 ## COG0385 Predicted Na+-dependent transporter - Prom 36989 - 37048 9.9 - Term 37019 - 37071 14.0 35 14 Op 1 . - CDS 37087 - 38556 1962 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 36 14 Op 2 4/0.000 - CDS 38559 - 39734 1144 ## COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase 37 14 Op 3 2/0.000 - CDS 39718 - 40869 733 ## PROTEIN SUPPORTED gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 38 14 Op 4 6/0.000 - CDS 40885 - 42258 1230 ## COG1066 Predicted ATP-dependent serine protease - Prom 42349 - 42408 8.3 - Term 42272 - 42311 8.1 39 15 Op 1 5/0.000 - CDS 42422 - 44872 2416 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 45037 - 45096 11.5 40 15 Op 2 7/0.000 - CDS 45104 - 46168 646 ## PROTEIN SUPPORTED gi|163764772|ref|ZP_02171826.1| ribosomal protein L5 41 15 Op 3 5/0.000 - CDS 46175 - 46714 280 ## PROTEIN SUPPORTED gi|163764773|ref|ZP_02171827.1| ribosomal protein L24 42 15 Op 4 . - CDS 46721 - 47200 222 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 - Prom 47257 - 47316 6.3 + Prom 47255 - 47314 8.6 43 16 Tu 1 . + CDS 47414 - 47920 574 ## Vpar_1025 S-adenosylmethionine decarboxylase related protein + Term 47936 - 47986 5.1 - Term 47923 - 47968 7.6 44 17 Op 1 . - CDS 48001 - 48684 819 ## COG0546 Predicted phosphatases 45 17 Op 2 19/0.000 - CDS 48686 - 49111 629 ## COG0822 NifU homolog involved in Fe-S cluster formation 46 17 Op 3 24/0.000 - CDS 49126 - 50355 1471 ## COG0520 Selenocysteine lyase 47 17 Op 4 12/0.000 - CDS 50368 - 51414 1209 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 48 17 Op 5 41/0.000 - CDS 51424 - 52833 1677 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 49 17 Op 6 . - CDS 52842 - 53585 185 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 53737 - 53796 9.4 - Term 53754 - 53785 -0.1 50 18 Op 1 . - CDS 53880 - 55136 1232 ## COG0019 Diaminopimelate decarboxylase - Term 55144 - 55185 8.3 51 18 Op 2 . - CDS 55200 - 55616 597 ## Vpar_1033 DoxX family protein - Prom 55852 - 55911 7.9 - Term 55864 - 55922 12.5 52 19 Op 1 41/0.000 - CDS 55958 - 57583 1610 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 - Prom 57608 - 57667 4.0 - Term 57615 - 57649 1.1 53 19 Op 2 . - CDS 57696 - 57977 555 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 58048 - 58107 7.5 54 20 Op 1 3/0.000 - CDS 58109 - 58687 801 ## COG3707 Response regulator with putative antiterminator output domain 55 20 Op 2 . - CDS 58688 - 60079 880 ## COG3920 Signal transduction histidine kinase 56 20 Op 3 9/0.000 - CDS 60082 - 61113 796 ## PROTEIN SUPPORTED gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase 57 20 Op 4 20/0.000 - CDS 61110 - 61559 303 ## PROTEIN SUPPORTED gi|125974278|ref|YP_001038188.1| SSU ribosomal protein S18P alanine acetyltransferase 58 20 Op 5 12/0.000 - CDS 61559 - 62317 218 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 59 20 Op 6 2/0.000 - CDS 62301 - 62795 427 ## COG0802 Predicted ATPase or kinase 60 20 Op 7 . - CDS 62785 - 63765 940 ## COG0611 Thiamine monophosphate kinase - Prom 63792 - 63851 6.3 - Term 63816 - 63859 9.5 61 21 Op 1 . - CDS 63878 - 64438 733 ## Vpar_1043 hypothetical protein 62 21 Op 2 . - CDS 64442 - 65290 913 ## COG0860 N-acetylmuramoyl-L-alanine amidase - Prom 65409 - 65468 2.2 63 22 Tu 1 . + CDS 65295 - 65480 143 ## - Term 65697 - 65734 2.1 64 23 Op 1 . - CDS 65784 - 66728 1082 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 65 23 Op 2 1/0.000 - CDS 66725 - 68302 472 ## PROTEIN SUPPORTED gi|225086616|ref|YP_002657886.1| ribosomal protein S15 66 23 Op 3 . - CDS 68304 - 68675 250 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 67 23 Op 4 . - CDS 68744 - 69535 623 ## Vpar_1048 hypothetical protein - Prom 69558 - 69617 9.0 - TRNA 69630 - 69713 76.2 # Leu CAA 0 0 - Term 69584 - 69625 11.3 68 24 Op 1 . - CDS 69768 - 70529 577 ## COG0496 Predicted acid phosphatase 69 24 Op 2 . - CDS 70547 - 71809 1144 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 70 24 Op 3 14/0.000 - CDS 71829 - 72500 685 ## COG1183 Phosphatidylserine synthase 71 24 Op 4 . - CDS 72493 - 73134 691 ## COG0688 Phosphatidylserine decarboxylase 72 24 Op 5 . - CDS 73149 - 73871 776 ## COG1922 Teichoic acid biosynthesis proteins 73 24 Op 6 . - CDS 73887 - 75341 1764 ## COG0516 IMP dehydrogenase/GMP reductase - Term 75359 - 75417 12.1 74 25 Op 1 . - CDS 75418 - 75603 343 ## Vpar_1055 4-oxalocrotonate tautomerase - Prom 75640 - 75699 8.9 75 25 Op 2 . - CDS 75736 - 77778 2308 ## COG1200 RecG-like helicase - Prom 77868 - 77927 7.4 + Prom 77897 - 77956 9.5 76 26 Tu 1 . + CDS 78002 - 78190 326 ## PROTEIN SUPPORTED gi|227371107|ref|ZP_03854591.1| LSU ribosomal protein L28P Predicted protein(s) >gi|292596543|gb|ADCV01000005.1| GENE 1 11 - 142 152 43 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 1 43 111 153 157 59 60.0 1e-09 MDTVGRYEGAIKEYIRNQLQEDIAQDTLNFKEYTDPFTGEPVK >gi|292596543|gb|ADCV01000005.1| GENE 2 368 - 1732 1541 454 aa, chain - ## HITS:1 COG:MT3405 KEGG:ns NR:ns ## COG: MT3405 COG1473 # Protein_GI_number: 15842897 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 19 419 1 374 394 120 27.0 4e-27 MIDRILYGRFYKGDIMSRMTKEEVKQRVCEAIVNAQPCLRELAESIMAEPELGFKEVKTS KKVQDMFDELGISYTTGHALTGVKGRMKGRDSKYTVAMVGELDAILCPRHPRADDLTGAA HCCGHNVQITNMFAVAMGLQAVMDQLAGDVVLFAVPAEEMIEIDYRNKLREQGKLKYMGG KQQLIYEGVFDDIDMAMQMHVETAKTPAGEMGLGSTSNGFVSKLIEYHGKVAHAAQAPHE GINALNAALMGVMGVNSIRETFKESDYFRFHPIINQGGTLVNCVPDYVQVESYVRASNIE AIVDGNHRVNRALKAGGDAVGATCVIHDLPGYLPMRNDECMNTLLRENSNPIFGEANVYQ GPHITASTDMGDVSHLMPVIHPWVGCISGVLHSAEYEISVPDVAYIKTAQALAMTIVDLL YDDAAGAKDVLDNFTPALNKETYIELLDRIAKGE >gi|292596543|gb|ADCV01000005.1| GENE 3 1812 - 2273 720 153 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0982 NR:ns ## KEGG: Vpar_0982 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 153 1 153 153 233 99.0 1e-60 MSKSEKLTQFVIVICIAAIITAVGNVMDGKHLFSDSLVGVAILAVLATIGALISNLPYTN KLPMVFWVSLVGVIASLPGMPGQEWIIAKTSQVTFLATTTPVLAYAGLSLGKDLGAFRRL SWRIIPVALAVTAGTFICATALAQLVLHLEGLI >gi|292596543|gb|ADCV01000005.1| GENE 4 2266 - 3060 911 264 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0983 NR:ns ## KEGG: Vpar_0983 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 264 4 267 267 416 98.0 1e-115 MGNLKIHFLALVLTVVAEFIGIKKLGPVVLLPLLYTLILGLLISIPKFKILTIKQMEKSA DYIGIAVMILMVKVGLGIGPNLGILTSAGWALLLQEFGHFFGTIVFGLPIALLVGMRREA VGACYSVDREPNVAIIIDKFGFSSPEGRGVMGMYICGVLIGAMWSSVLAGMLAQSGWFHP LALAMGAGVGSASMMAAATAPIIAVYPDYEQQIMALAGAANLLTTVLGVYFGLFVSLPVM EKTYNFFTGRTREQDLAEEAANHE >gi|292596543|gb|ADCV01000005.1| GENE 5 3233 - 3937 752 234 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0988 NR:ns ## KEGG: Vpar_0988 # Name: not_defined # Def: DNA repair protein RecO # Organism: V.parvula # Pathway: not_defined # 1 233 1 233 233 442 94.0 1e-123 MKKLNGGFNTPAIVISRKKYKLYSVFTFITPSLGLIKASIPHKRMMTMRNSSYLRPFSAM YITVVPDGEYVNVTQIDGSYVVESLDVNLDNIAYAAVASELIQELFAMYDVDRKVFDTVV NYSKQIRRRNVQLGTIMLGWQLLSLAGIVPSANAFTQQDGIDPFWLQVRETTNLSISRSV KAALPQILAYQWGEDTPLELPKTIWKEFEKLLFSYCEQEIGKPLQSVKFLNSII >gi|292596543|gb|ADCV01000005.1| GENE 6 3924 - 5255 1368 443 aa, chain - ## HITS:1 COG:HP1490 KEGG:ns NR:ns ## COG: HP1490 COG1253 # Protein_GI_number: 15646099 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Helicobacter pylori 26695 # 1 426 9 438 449 250 34.0 4e-66 MDSVDGLLPIGFGLLCIFLINFFVVAKFSFARLRKEHVEDMDILLEKDREFLLKLYQNPE YFLNTTQFLILFFILALAGTGTFVFDNIVDRIVAVLNIHSTWMHLVLDIILLLLISLIVL IFGEIVPKALGLSFPTKYVNTYSRIVVAAGKLVYPFIWIASKISNVILGFYKTKYLTELD LVYSEEEIRMMISRSHEEGQLDQVESELIDNVFNFVDRMAKEVMVPRQDVDCVFVEDGYD EAMKVIRSKVHTRYPLCVEDKDHIIGLVHIKDLMERPNQARKDLRNIKRDILTVPEVMKL STLLQYMRTRRIYLAVVVDEYGGMVGLVGLEDIIEELVGDIQDEHEPHLPATMSYADGSF EFDGKVLVDEVEEIMNIEIDNSDSDTIGGYVFGLLERTPIVGDTVDAHGYTFEVTQMQGY RISRIKVTPIPVEEPTEEENEEA >gi|292596543|gb|ADCV01000005.1| GENE 7 5310 - 6209 1131 299 aa, chain - ## HITS:1 COG:BS_bex KEGG:ns NR:ns ## COG: BS_bex COG1159 # Protein_GI_number: 16079583 # Func_class: R General function prediction only # Function: GTPase # Organism: Bacillus subtilis # 4 299 3 298 301 344 55.0 1e-94 MNKNEHFKSGFVAVVGRPNVGKSTLINALIGDKIAIVSDKAQTTRNRIICVYTDESKQIV FMDTPGVHKPKHKLGEFMVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLKRVKVPV FLVVNKIDTLKKEELLEAIVFYQDAYPFAGVIPISAKDKENLSEILKVLEETLPEGPQYF PEDMITDQPERLIISDIVREKILLATRDEIPHAIAVDVDEMKTRDDGTTYIRATIYCERD SQKGIIIGKKGALLKQLGAEARADIQKLLATKVYLDLWVKVKKDWRNKSGMLSELGYRK >gi|292596543|gb|ADCV01000005.1| GENE 8 6202 - 6678 648 158 aa, chain - ## HITS:1 COG:BH1363 KEGG:ns NR:ns ## COG: BH1363 COG0319 # Protein_GI_number: 15613926 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Bacillus halodurans # 18 151 19 158 159 107 47.0 9e-24 MYIHISYDEGIQEDSNIEAVIRKVCDEVSRVYGLDEDEMSILLCNNAKIHELNKEYRGID RPTDVLSFALNEGDDYEGSEEEHHLLGDMIISLERTREQAIEYGHSFERELAYLTTHSCL HILGYDHMNDEDKKEMRTEEEFILGNLGYVREDAPYNE >gi|292596543|gb|ADCV01000005.1| GENE 9 6681 - 7694 1188 337 aa, chain - ## HITS:1 COG:lin1504 KEGG:ns NR:ns ## COG: lin1504 COG1702 # Protein_GI_number: 16800572 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Listeria innocua # 15 313 18 316 319 318 53.0 1e-86 MSEQVFTFPTYDLAQSILGQHNRYLHMMLEVISADVVARGDTVVIKGDEKHVEALYRTLE ELVFLYREGSTITESQVRIAAKLVANGKADAVHTMFKDTLSVNMRGKNITPKTEGQKYYV DSIRKNTITFGIGPAGTGKTFLAVALAAFYLKNRNVDKIILTRPAVEAGERLGFLPGELQ DKVDPYLRPLYDALHEMFGIEQVQRFMERGTIEVAPLAYMRGRTLENAFVILDEAQNTTA EQMKMFLTRLGNNSKMVVNGDKTQIDLPPRVVSGLGEAEKVLRHVHGINMVYFSDQDVVR HDLVGRIVKAYDAYHERKLAGETTESNAVSKENVAKG >gi|292596543|gb|ADCV01000005.1| GENE 10 7703 - 8668 759 321 aa, chain - ## HITS:1 COG:TM0515 KEGG:ns NR:ns ## COG: TM0515 COG1242 # Protein_GI_number: 15643281 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Thermotoga maritima # 9 312 2 302 303 264 41.0 1e-70 MTDTTRPKRYRMVSKYYKETYGEKVYKLPVALPLTCPNRDGSAGVGGCTFCGEIGAGYEN RPAWMTVRMQLEENIAHIGPKYKAKKFIPYYQNFSNTYLNLDDFKSYIEQGCIDEAVGIA IATRPDCIADEYLEILADIRDRFHKDIYIELGLQTVNYDTLEKINRGHDLAQFIDAVLRI KRYGFNITTHMIVNLPWDTMKDTIEGARILSALGVDQVKLHALYIVKDTLMAKWYQEGQF TLISAEEYADRVVNFVRHLHPDIVLQRLVGRAPEDNTLFTNWSMGWWRVQDLIDDKLDEL DAHQGDLCDYLNGKAVRKFID >gi|292596543|gb|ADCV01000005.1| GENE 11 8777 - 10492 1659 571 aa, chain - ## HITS:1 COG:CAC1021 KEGG:ns NR:ns ## COG: CAC1021 COG1032 # Protein_GI_number: 15894308 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 6 384 48 423 548 283 41.0 6e-76 MPVLHILSDITERNIDVLGFACYIWNIEMTLHVVDMVKAVRPDIKIILGGPEVSFTADEI LNRCVAVDYVVQGEGEEAFYQLISALIAGKDGLEEQIPGVRGRHISGRLLGSTDTVEVKD LSTIPFPYVEEDMIDLEHKIIYYESSRGCPFSCQYCLSGNKNTVRFFPQERTFKELQWFI DHKVKQVKFVDRTFNCAPHHHRPMMEFMCDADTETNFHLEMEPELMTEWETNILCETPPG RIQIEVGVQSTHKKTLDAINRYNDWPYIQKAIRPIIEAGRTHVHMDLIVGLPYENKQRFG LSFNDLFSLQPHALQIGFLKLLKGSGVRRMEEYQYISDPLAPYEVLSTHVLPYRDIRFLK HFEDVFERFYNSERFRTVFGYIGSKLIKEHTDTSITGEDTETNHVPFMKKYDPSKVETKN DAFSYFCDMTQAWLDAGNHKINLKDIDQIEFLYNFFLSKGDTVAAELLQYDTLVSYRGKV RSEAVGLPKQTKELLQEGEAFWRNEEIASQYIPNYTFKEWRKIRQQYVEMPMSEDTAKVL GIENVPNVPFTVVIDVNKEVKPFIRPDVEAC >gi|292596543|gb|ADCV01000005.1| GENE 12 10679 - 11095 542 138 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0995 NR:ns ## KEGG: Vpar_0995 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 138 1 138 138 169 71.0 2e-41 MSDQHNTNNNQNTYRNNERSDSFGSNAHFGEPNTRVLSDDERRDFDGVTIEEVGDSVHVD STPSNMNEEYQRSEEYNQYGPHVKVYSFNSTSWLSRIILIIILAVVLAAVVFFGGIILSV VGVVILVGAIVSFIFGLF >gi|292596543|gb|ADCV01000005.1| GENE 13 11264 - 12712 2138 482 aa, chain - ## HITS:1 COG:CAC2669 KEGG:ns NR:ns ## COG: CAC2669 COG0064 # Protein_GI_number: 15895927 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Clostridium acetobutylicum # 4 476 2 469 476 509 51.0 1e-144 MSSKYETVVGLEVHTELKTKSKIFCGCTTEFGGDQNTHVCPVCLGLPGAMPVLNKQVVEF AIKVGLALNCEILNFNKFDRKNYYYPDLPKNYQTSQYDLPICLNGHLDIEVNGETKRIGI TRIHMEEDAGKLVHSGNTISDSKSSNVDYNRTGVPLLEIVSEPDIRSGAEARAYVEKLRS ILQYLEVSDGRMEEGSLRGDCNVSVRLRGTKEFGTRTETKNVNSLTAIQKVVEYEALRQA KLIEAGGKVDQETRTWDDAQGITIGMRKKDEENDYRYFPEPDLVPIVITDEKIEEVRRAL PELQDAKIERFVSEYGLSREDATILTVSRKTADFLDATVKAGADAKTVANWMLGDLSKMI NESGLTFAESKVSPENLAGMIALIDKGTISGKIAKKVIVSMWESGKDADTIVKEEGLVQI TDTGAIEEIVKQVIANNPQPVADFKGGNGKAIGFLVGQVMKESKGRANPGMVNQLLQKYL KD >gi|292596543|gb|ADCV01000005.1| GENE 14 12709 - 14169 404 486 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 2 475 7 457 468 160 29 3e-38 MATIHELHKKLVNKEISAVELTNAVIAHKAKVEPTVHAYLSDSHDRALATAKLVDEAIAK GDAISPLAGIPGAIKDNICIKDEPATCASKMLENFVPPYNASVIERLQDNHYISLGKLNM DEFAMGGSTENSALAKTSNPWNADCVPGGSSGGSAAAVSSGSAIWALGSDTGGSIRQPAS FCGVVGLKPTYGNVSRYGLIAFASSLDQIGPVTRDVTDAALVLNAISGHDAKDSTSIPGT RVDYTTALVNDVKNLKIGVPKEFFGEGLNSEVRKAVEEAIETYKKLGAEIVEVSLPNSKY ALSAYYIIALAEASSNLARYDGVSYGMRVPADNLVDMSTKTRTEGFGPEVQRRILLGTYV LSAGYYDAYYLKALKVRRLIKNEFDEAFSKVDLILTPTAPNTSYKFGEKANDPLAMYLED ICTVPANLAGIPGISIPAGMSSNNLPIGLQLLGPAMGEETLLRAAFTFEQARPDCQLVAP TGEVSL >gi|292596543|gb|ADCV01000005.1| GENE 15 14181 - 14471 480 96 aa, chain - ## HITS:1 COG:lin1868 KEGG:ns NR:ns ## COG: lin1868 COG0721 # Protein_GI_number: 16800934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Listeria innocua # 3 96 4 97 97 68 39.0 3e-12 MKISQEEIKKIALLSRLEVKEEHMAHVEKELSDILTYVAELDALELDGVEPMAHAVPLHN VFREDETKPSLDHDLALSNAPEAEDGYFKVPRVVQE >gi|292596543|gb|ADCV01000005.1| GENE 16 14546 - 16549 2668 667 aa, chain - ## HITS:1 COG:BH0649 KEGG:ns NR:ns ## COG: BH0649 COG0272 # Protein_GI_number: 15613212 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Bacillus halodurans # 6 660 9 667 669 634 52.0 0 MNPKDRIKELQQELTHAQYLYYVKDAPTMSDFEYDKKYRELVDLETAHPEYIVSSSPTQR VGMKVEGSFEKVVHGRPMLSLSNVFSADEVRAFASRVEKELGHKPSAYVVELKIDGLAVN LHYENGMFVRAVTRGDGRIGEDVTANVRTIKSIPLYLENAPEFIEVRGEAYMPHSEFKRI NEERDEEGLPTFVNPRNAAAGSLRQQDPAITASRNLAFFAYAIGSEVGANIHSQEELLQS LETFKFSVNPHYRVCKTIDEVIDAINYWGEKRHELPYDTDGMVIKVNSFDDQEVLGSTAK DPKWATAYKYPPEEVETVLKDITINVGRTGVLTPTGELESVFVSGTNVSRVTLHNQDFIN EKDIRIGDHVIIHKAAEIIPEVIRVVPEKRNGSEIPFTIPNTCPVCESPAVRREGEAAVR CTNKHCPAIEKEQIIHFVSRDAMNIDGLGPSIVENLINNKLITNVVDLYHLTVDQLVTMD RMGKKSAENLVKAIADSKTRGLDRVLYGLGIRLIGSKAAGTIANVVKSMERFMTITKEEL VAVEEIGPTMADSIVEYRQDPAHVEIIEGLTAAGLKMTVDVVEAAGNQMEGEIVVLTGKL EVMGRSEAGKILEAHGAKVTGSVSKKTTLVIAGEDSGSKLTKANELGIRVMNEEEFVELL RELGEIQ >gi|292596543|gb|ADCV01000005.1| GENE 17 16631 - 18820 2343 729 aa, chain - ## HITS:1 COG:BS_yerF KEGG:ns NR:ns ## COG: BS_yerF COG0210 # Protein_GI_number: 16077729 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus subtilis # 2 728 6 738 739 705 51.0 0 MNSLLTGLNKEQQQAVQHTEGPLLILAGAGSGKTKVLTVRIAHLLAQGVNPYEILAITFT NKAAKEMKSRVEGLVGDVATRIWLSTFHSFCAKFLRFELDNFLGYNSNFTIYDTSDSQAV IKAALKALNLDDKYYPVGAMIGAISDAKNKLLFASDFRKQARDFYQQKVADVYEYYEREL RKNNALDFDDLLLVAVKLLQSNEAVLDKYSKRFRYVMIDEYQDTNHAQYLLAKLLASHWK NIAVVGDADQSIYAWRGADIQNILDFEKDYPNCTSIKLEQNYRSTKIILDAANAVIENNE GRPKKNLWTDKTEGAKIQHFTAQSEHEEAAFIGDTIAKKHDIHGVPYGDMAILYRTNAQS RVLEEALIKRALPYTMVGGTKFYDRKEIKDVLAYLRVLYNPFDDLSLLRIINVPKRSIGA TTVAKLQDYARANGTSLFMTLTQLHLVDTIKGKTKEKLEEFGILIFTLVAEMEDKTVLDI LESILDRTGYLAQLEESTDPQDQARAENIGELLSVAKDFQDTNPNGTVEDFLEQVALVND VDSFEQEESKVTLMTLHAAKGLEFPIVFLGGLEEGLFPHSRTLMNPEEIEEERRLAYVGI TRAEKELYISNATTRTVFGRTSSYLPSRFIDEIPEELVDGLRAKRKVPDDIKRHVPQHMS VTSRPVTKPIVRNEVIADWKVGDTAIHSKWGNGKVINVAGEGAGMKLTIEFPTQGVRVVM AKFAPVKKG >gi|292596543|gb|ADCV01000005.1| GENE 18 18925 - 19866 1382 313 aa, chain - ## HITS:1 COG:BS_yybQ KEGG:ns NR:ns ## COG: BS_yybQ COG1227 # Protein_GI_number: 16081107 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Bacillus subtilis # 5 312 3 307 309 266 46.0 5e-71 MSDVKTYVAGHKSPDTDSICSAISFANFLTQMGTPATPVCAGEANKETTYVLNHFGFEHP QIVKNWEEFAPEGGNLYLTDHNESKQIIDGYKSMNMCGVVDHHRIGDFETDGPVFMRLEP VGCSNTIITKLYMENNQEIPKTIAGLMLSAIISDTVLFRSPTCTETDKEMAHKLAEIAGV DIESYGLDMLKAGADISDLTNDDIVRTDMKEFSEAGKTISIGQISVMDTTDVLAKQAELV AALEALRSANNYDASYIMVTNILDESTTLLFSGDVEAVVTKAFEKEVKDNGVFLPNTMSR KKQIVPPILGAMK >gi|292596543|gb|ADCV01000005.1| GENE 19 20022 - 23204 3907 1060 aa, chain - ## HITS:1 COG:BMEI1629 KEGG:ns NR:ns ## COG: BMEI1629 COG0841 # Protein_GI_number: 17987912 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Brucella melitensis # 1 1049 1 1030 1051 796 43.0 0 MSKFFINRPIFAIVIAIVITLVGLISMMNLPIARYPQISPPTVRVNTAYTGATAQVVNDT VASVIETQIVGVQDMDYMTSSSSSNGSYSLTVQFNQGTDADMDTVNTQNRVQAALAQLPA EVQAVGVTTTKSSGDMAMVFSLNSPDGTYDSTFLKNYATNYMMDAIKAIKGVGSVQEFGS DYAMRIWLDPAKMQNLGVTISEVTAAIKGQNLQAAAGTVGQNPTNGEQAFQYPIKIEGRL VTPEQFGNIAIKSSNGKVLHLKDVARIQIGAKGYDFIAKSAHKEVAGFAISLQNDANALE TIANVKKVLDEQSKSFPPDMQYNVVVDNTKFVSASINEVEHTFVEALLLVLFVVYVFLQS WRSTIIPMIAVPVSLLGTFGAFVLLDFSINTLTLFAMVLAIGLVVDDAIVVVEAVEYELK YNGLPPKEAAIKAMENVQGPVIGIAFVLVAVFVPVAFMGGMTGILYKQFALTIAVSVVIS AIVALVLTPALCATMLKPHTPKEREDLVHCQLNKFNAGLERFSNWYGIQLARLSHRLSLT VIALLIFAGGTGLVFHFLPTSFVPAEDSGYYMIAVNEPPGATSERTMATLEKIASFLEGK NDPEKPKDEQLFQEVFTVAGFDLLGGGQKSSAGVIFATMSDWKYRTTQATSINAMVGQTF GFAAEKVPEATVIAMNPPSIPGLGSTGGFSMYLINKAGDSPQVMAERANEFLAEARKSPA IRSIYTTFDTSTPSLQFDVNREKAAQDGVALADIFTTLQGFYGSIQVNDFTTYGKNYKVV VQAEDAYRQNAEQLNMLAVRNSKGLMVPVSNYITKEQTGTPSSITRFDNAMAVQIGGSQA NGYSSGDAINALKEAAAKTLPAGYTYDWAGQSREELKAGSQTIMILGLGLVFVFLILAAL YESWKVPFAVLFSVPSGMIGASLVPFLLNFTGRYSLANDIYMQIGLLTLVGLAAKNAILI IEYAKIRVDERGMNVVDAAIEAAKIRLRPILMTSFAFILGVLPLAVSTGAGSGARTSMGI TVVAGMTTATLFGIFIIPMLFIIIETLGPGLFTNRKKNHD >gi|292596543|gb|ADCV01000005.1| GENE 20 23219 - 24346 1475 375 aa, chain - ## HITS:1 COG:PA2528 KEGG:ns NR:ns ## COG: PA2528 COG0845 # Protein_GI_number: 15597724 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 28 373 58 402 426 171 32.0 2e-42 MKFRYSRMLAALVVSAVMVAGCGSNQQQAGDVSVNAYKITASDAQVNQTYAGTVVAENSV AVHARVTGYVVEKYVKGGEQVVAGQPLYRIDSRQYEATLANAEAQAAQANANYKNAEVDL NRYETLAQQDAIAQQRVDTQRSTVEQAKAAYEAYEASVKIAQDNYGDTMVYAPYSGTLRM DDIDMGTFVQAGSTTLVTIDSIDPIFVEFSMTEQEYLDFMKKPTGDDSNGPNIQLKLADG ETYNQPGSIVQAAKSLDQSTGKLVLKASFPNPDHLLLPNMFATVISPGQKLKDAILVPSR AILQIMDKNFIYVVNADGVVEQKSVEVGGTSGSDTIIKAGLAPGDTIIVDGLTKVKNGVK VNAKLLSKEQLKATK >gi|292596543|gb|ADCV01000005.1| GENE 21 24593 - 25210 405 205 aa, chain - ## HITS:1 COG:FN1116 KEGG:ns NR:ns ## COG: FN1116 COG3340 # Protein_GI_number: 19704451 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Fusobacterium nucleatum # 2 200 3 202 203 172 46.0 5e-43 MEILLMSYLAGTKNITKKYLSKMISNKIVFIPTAGNVEPYTGYIDEGVEMLKSLGYELEI IDISKYDEDYLKNKLSKTECICISGGNTFYLLQELKKKNLIGLLYERIKEGLLYIGESAG AIIMSENIEYNQIMDDKSIASELDDYMGVNVFNHYVVPHLGEYPFEETAQKTLDTYQNKI PLVPINNNEVILVEDHGYTVLTEKK >gi|292596543|gb|ADCV01000005.1| GENE 22 25626 - 25808 188 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQLMQNFLLRLNVFPPFNGLMERRLAIYTTRTPVETFTSPCVGLIIISPFNTAVNYIEPL >gi|292596543|gb|ADCV01000005.1| GENE 23 25882 - 27057 1130 391 aa, chain - ## HITS:1 COG:BS_kbl KEGG:ns NR:ns ## COG: BS_kbl COG0156 # Protein_GI_number: 16078763 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Bacillus subtilis # 8 390 5 389 392 315 42.0 1e-85 MFSGDCMYKFFQEQLNNKINNLNLRTLTEYCPIDAVRVKRNDKEYLMMASNNYLGLTFDE RVIEGAIKGAQQYGTGSGGSRLVSGTFPLFTDLERELAKFKNTEKALVFNTGYMANVGTI SAIADKNMTIFSDELNHASIIDGCRLSKATVKAYSHCDVEELKFLLKQVDRNARKLIVTD GVFSMDGDIAPLDKLYEVSREYNALLMVDDAHATGTIGSGHGTAAYYGLEKEVDIQLGTL SKSLGSVGGYVAANSTIIDYLVNMSRSFIFSTALSPADIGAALAALHILESDTSVLGRLQ ENVNYMALQLIAMGIEATNETPIFPILIGSNEDTLTVSDYLYNAGIIGTAIRPPTVPVGE SRIRLTVTAAHNKEQIDYVCRTLDKAIKELN >gi|292596543|gb|ADCV01000005.1| GENE 24 27044 - 27772 729 242 aa, chain - ## HITS:1 COG:BS_bioW KEGG:ns NR:ns ## COG: BS_bioW COG1424 # Protein_GI_number: 16080076 # Func_class: H Coenzyme transport and metabolism # Function: Pimeloyl-CoA synthetase # Organism: Bacillus subtilis # 15 241 3 237 244 156 40.0 3e-38 MDELYSVRMRAAQGGPHENGGHHISGAERIVTLNQVGSIAQSLAERALHHSKGTADFINI TVDLIPAETITYIECLKVNEHLANTVAEAHQLAVELLQGADISETAVKHAIFLLEGLDSS MRGAMLVDAISGERIDSGNRGVRVSHMDSFDSEKLGENEHMREALVLASKVQSAEGIVGE LCWSDDPDYTVGYVACNDIYHRIPSMKEFGSNLGGRVFFVKPNTDVDCVIKYLEKAPVLV QR >gi|292596543|gb|ADCV01000005.1| GENE 25 27772 - 28272 603 166 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1007 NR:ns ## KEGG: Vpar_1007 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 166 1 166 166 257 98.0 1e-67 MNQNIRYITEVAILTAMITVLGAIKIPNVIPGIEFQLSAPLAVAICAVFGFKKYIISGCL SSLIGLALGTQTILNVMIAMQFRLIVGLILWICHNHMIGIMVSGPIASALARLSLSLYVG KAALPMIALAVPGMIFTVIMAPVFVKVFYKIHNQVPQSNVVKGKVS >gi|292596543|gb|ADCV01000005.1| GENE 26 28427 - 28897 533 156 aa, chain - ## HITS:1 COG:lin2542 KEGG:ns NR:ns ## COG: lin2542 COG0691 # Protein_GI_number: 16801604 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Listeria innocua # 4 155 3 154 154 173 58.0 9e-44 MAKKSSPSLIADNRKARHDFHIHETYEAGIALTGTEIKSIRQGKLNLKDSFCRIDKGEIL LYGVHISPYEQGNRFNHEPERTRKLLMHKSEINKLHAQVKEKGFSLVPLNFHFSHGYVKV TVGLVTGKKLYDKRQDMAERDAKRDIAKRIKEQQKY >gi|292596543|gb|ADCV01000005.1| GENE 27 28906 - 31200 1432 764 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 7 676 31 703 730 556 44 1e-157 MDNRIRGGKDLEMFIRSAKMLAREGVLTSSRPDVYRYEDQQHEEYEGIYKGYRKSYGFVI MLDDEDIYVAEQNKGTAMHNDKVRVRIVPSDYTKHKREGIIVDVIERANETIVGTYDRQQ HFGFVVPDDERIGTDIFVDLKDTLDARSGAKVLVKITKWPEGNKKPEGIITEILGYKGDV GLDINCIMANHKIPFAFPKEVIEASEKIDTIVHEDPKRWDLRALQMVTIDGEDAKDLDDA VSGRKLPNGNYELGVHIADVSHYVTSGQPIDNEAYKRGTSVYLVDRVVPMLPEVLSNGIC SLNAHEDRYAMTCMMEIDDSGTVVNYRIRPSIIHVGRRCSYKEVYKALEENIVPDDLVDF IPMLRDLAEISKILNRMRRRRGALDFDFPEYKVLLDLDGTPLRIVKRDRTMAERLIEECM LIANETVATHLKDTQRTSVYRIHEHPSEEKLDLFQKVLHYLGQTLVLSADGVTPRDFQKI LDVVKGQDIEQVAQIMTLRSMQQAKYSIENVGHFGLASTCYTHFTSPIRRYPDLMVHRLL KADMHWKGGYSKRDVDEAFLAGAVEHSSIQEQVATEAERETTDLKKTQYMVPFVGEVFEG TIASITSFGMFVELENGIDGLVHISMMNDDYYFFDEEHFVLVGKRTGKTYHLGEKVTVTL VKADVEKKQIDFVLGEVDNLMAIQEQLSSGSDYATSRDGFGNLKGRKSSRKNGRKTSKRD DSKAGRSRYDAFSKKSKKGKSSRKKSNKATKRSQSKKSKSKRKR >gi|292596543|gb|ADCV01000005.1| GENE 28 31328 - 31564 293 78 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1010 NR:ns ## KEGG: Vpar_1010 # Name: not_defined # Def: preprotein translocase, SecG subunit # Organism: V.parvula # Pathway: Protein export [PATH:vpr03060]; Bacterial secretion system [PATH:vpr03070] # 1 78 4 81 81 95 98.0 4e-19 MTNFLMIVEVIVSILLIVVVVAQNSKNAGMGGAVSGAADSSFGGKQRGLDAFLSKCTIIL GIIFAVLSLVLGAMINQF >gi|292596543|gb|ADCV01000005.1| GENE 29 31570 - 32238 748 222 aa, chain - ## HITS:1 COG:BH0115 KEGG:ns NR:ns ## COG: BH0115 COG1595 # Protein_GI_number: 15612678 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 31 209 33 211 217 253 70.0 2e-67 MIHTRKSDYNFKEMTDEQVVVIAQEEQNEFAIDYIVNKYKNFVRAKARSYFLVGADREDI IQEGMIGLYKATRDFKHDKLASFRAFAELCITRQIITAIKSATRQKHAPLNSYISLNKPV YTEDSERTLIEMLSSTKITNPEDLIISQEELDDIEHNIGHILSDLEWEVLEGYLDGRSYQ EMAEVTDRSVKSIDNALQRVKRKLEKYLEHRVLGSHRASQEG >gi|292596543|gb|ADCV01000005.1| GENE 30 32318 - 32851 553 177 aa, chain - ## HITS:1 COG:SA0491 KEGG:ns NR:ns ## COG: SA0491 COG3688 # Protein_GI_number: 15926210 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Staphylococcus aureus N315 # 1 177 1 171 174 99 41.0 2e-21 MLKDILIVDGYNVIFAWTHLKKLAHESLEHARMELRDRLLNYGKFKGYEVILVFDGKYTK SGGSIESITSGFIEVYTEDGETADSFIEREVFLRKGKYTNVYVVTSDGAEQNQILGSGGL RIPARELQNMIRIAKEEERLQYAHEHRRDQFSVRRNEVGGLLSPEVAEKLEKLRRGH >gi|292596543|gb|ADCV01000005.1| GENE 31 32854 - 33585 549 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 241 7 247 255 216 41 4e-55 MDNYIVGRNAVKEALKSGRSIQRILVSEDKVKTGLADIVNLAKSQGIEVRPTPVKQMNKY DLEVPHQGVIALVSAVQFKELGEVLQETTHEVPLLILTDGVEDPHNMGAIIRTAECAGAT AVLIPKRHNAPINATVAKTSAGAIEQIPLVQIGNVVQTIKQLQKQGFWVMGAHMEGDRTL YEADMTIPTVIVIGNEGKGISRVVKEACDFLVTIPMYGNLNSLNASVAAAVLMYEAVRQR QAK >gi|292596543|gb|ADCV01000005.1| GENE 32 33587 - 34081 227 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764762|ref|ZP_02171816.1| ribosomal protein S13 [Bacillus selenitireducens MLS10] # 37 156 6 128 141 92 37 8e-18 MHGGKNVKFKQFQFLKNEAIKKLTALEEEPLRLRKRTIEECLSADAVMLAYIGDAVYSMY VRERVVQMNITKVQILHTIVTEFICAKSQAKVLLEIENTFTEDEQAIARRARNSNVNVPK NSTVQEYRSSTAFEAVLGFLYETRQDERLQHILGQAFSITLRGM >gi|292596543|gb|ADCV01000005.1| GENE 33 34053 - 35501 1389 482 aa, chain - ## HITS:1 COG:CAC3177 KEGG:ns NR:ns ## COG: CAC3177 COG0215 # Protein_GI_number: 15896425 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 4 478 1 460 464 480 50.0 1e-135 MREITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG YKVTYVQNFTDVDDKIINTSNGEGVSWDTIANRYIDSYFEVMDALGVQRADIYPRVSTHI DDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVDGRKKNPM DFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIFPHHENEI AQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALRYFLLSTHY RSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLLEKAKAYEEEFEDAM SDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIFKFMTDVIGVLEKAW EGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGITIEDSPQGARWKKR EV >gi|292596543|gb|ADCV01000005.1| GENE 34 35997 - 36950 1040 317 aa, chain - ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 1 302 1 300 321 217 40.0 3e-56 MSVIRSINHLFNSYLSWIVLLMAVLAYMLPAVFSWMTPYIAYMLQFVMFAMGLTLTAQVF IDVFKQPMKVILVSVIQFLWMPLAGFLVALAFNFPPEVGIGFILLGACPGGTASNVMTFL ANGNVPLSVSATTVSTLLAPILTPLFVVLYAGATSSIEIQFMPMFISIVKIVLVPIILGI VLNYFIGAKIEPVKSVCPTIASIAVLLILAAVTAVNQKQIAETGFIIFVACLVQNLSGYV VTYFICKALSIDVSSRRAMQIEVAMQNSALSVSLALKHFTPQAAVAGAVFSIIHNFTGSI FAGICRKHDDQDKLENA >gi|292596543|gb|ADCV01000005.1| GENE 35 37087 - 38556 1962 489 aa, chain - ## HITS:1 COG:BS_gltX KEGG:ns NR:ns ## COG: BS_gltX COG0008 # Protein_GI_number: 16077160 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Bacillus subtilis # 2 484 3 483 483 517 50.0 1e-146 MSSMKVRFAPSPTGPFHIGGARSALFNWLLARKEKGTFVLRIEDTDLARSTRESEENIKA SLQWLGMNWDEGIDVGGNNGPYRQTERLDLYKEVTQRLLDEGKAYECYCTPEELDAVRQD QMDRGETPKYNGHCEHLDEETKAKYIAEGRKPTIRLRVPLNKTYAFDDMVRGHVSFESNG VGDFVIVKSDGIPVYNFAVVMDDHMMGITHVIRAEEHLSNTPRQMAIYEALGWEVPKFGH ISLILGKDYKKMSKRHGATSVEQYKQLGYLPEALVNFLALLGWAPEGEEEFFTQDELIQA FSMDRVAKNPAVFDIDKLNHINFHYMKNLSDEELFHLCLPHLKEVGLAPDSLNQADIDWL TLLCSTFRDHISYGAQIKDHVGLFMGETVFLEEGHEEELRAVLNEETAPTVLGAFRNALA ELDEITPEVVKATIKAVMKETSLKGKFVFMPIRVALTGQMHGPDLNNIVTLLGKEKCLHR LDNVGALTK >gi|292596543|gb|ADCV01000005.1| GENE 36 38559 - 39734 1144 391 aa, chain - ## HITS:1 COG:BH0107 KEGG:ns NR:ns ## COG: BH0107 COG1211 # Protein_GI_number: 15612670 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2-methyl-D-erithritol synthase # Organism: Bacillus halodurans # 6 232 4 228 228 182 45.0 1e-45 MGKAISCIVLAAGAGRRMGYKENKIFIPLGGYSIIQRTIQNVEKIEGLKEIILVVAEGEQ EYMSNHIQGLDLHIPVKIVLGGRERQDSVAYGLKAVSEDSNIVLVHDGARPLASTKLFDS VVRAAIEYGAATVGVPATDTIKRVDTEHTVIETLKRSELYQIQTPQGFQKDLFKEAHQKA YDEKYLGTDDVSLVEHLGQPVHIVSGDYCNIKVTTPNDIAVAKRYLGIEDKRMRVGFGYD IHQLKAGRPCILGGVHIESGLGPDGHSDADVLIHALMDAMLGAAGLRDIGYYFPPEDDQY KGISSMLLLEKVNFLLKERGLQAYNIDIMVISETPKLKPHIDMMKANLQSILEIPLDRIS IKATTNEMLGAIGRREGIAAQAVVSVYEGEI >gi|292596543|gb|ADCV01000005.1| GENE 37 39718 - 40869 733 383 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 [Bacillus selenitireducens MLS10] # 56 373 76 389 397 286 47 2e-76 MIYRILRYVIAILVGTAAYVGMDSLAPIIDPYLVSQFESFGDMSLTIARIAVLIVGTLLG LVIGYLISSFILKQGLVIAKRLERILTHIPNQELIAGTIGLLFGLIIANLIGVAFNQVPI IGPYIPIILSAIFGYSGLKIMARKGPEMYNNYVQQWGGDSTKKTSRFKMFSTHKLDKSSS TPKLLDTSVIIDGRIKELCATGFIEGPLMVPLFVLNELQVISDSADATKRNRGRRGLDIL KDMQDANKVAIEVVEDDYDDLVEVDSKLMRLALDKQWKLMTNDFNLNKVARVQGIEVLNL NELANVLKPALIAGEWIRVQIMKEGKEVHQGVAYLDDGTMIVVEDGKPYVGQNVEVMVTS ILQTSAGRMIFARVDGGQNGQGN >gi|292596543|gb|ADCV01000005.1| GENE 38 40885 - 42258 1230 457 aa, chain - ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 453 1 453 458 487 54.0 1e-137 MAKAKSVFFCQNCGAESSKWMGRCPQCGEWNTLVEEIIKETKHSRTPSRGVGNQTAKPTA LPDIEISSIARVSTTFGEIDRVLGGGIVPGALMLLGGDPGIGKSTLLLQVSQKVADTVGA VLYASGEESQLQLKLRAERLHINSERLQVIADTDLDHILEQAEAMTPSLLVTDSIQTMYT GDIDAAPGSVSQVRECTSRLLRFCKERNIPTVIIGHVTKEGNIAGPRMLEHMVDVVLYFE GERSYQFRILRSIKNRFGSTSETGIFAMVEEGLQELSNPSASLLAERSDEESGSAVMIYL EGVRPILVEVQSLVVTTAFGMPRRTAIGYDLNRLIVLLAVLEKRCGFTLGNKDVYVNVIG GLKVNEPACDLSMAVAIVSNLKNRIVPTDMVILGEVGLTGNVRSIPRIEQRINEAKKLGF KKFIIPEGNYKQIKDNDSSIKIKGVKSIQEAMQLVFS >gi|292596543|gb|ADCV01000005.1| GENE 39 42422 - 44872 2416 816 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens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gi|292596543|gb|ADCV01000005.1| GENE 40 45104 - 46168 646 354 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764772|ref|ZP_02171826.1| ribosomal protein L5 [Bacillus selenitireducens MLS10] # 1 352 1 350 365 253 40 2e-66 LMLDTILDSPLSQWLCQDTEATDHIVISSRIRLARNFDDILFTNREDTVSLEKVNKISRG LLPILKKADEHQYTNISLEQLSQRERAVLVEKHLMSPALEEQLPYRNLIVSDDASIAIMV NEEDHLRIQSMAPGLKLQQAYNHAVQIDKAIEAKSPYAFDKRFGYLTACPTNVGTGLRAS VMLHLPALTLSGRITRLIRNIIQLGYSVRGLYGEGSEALGCIYQISNQRTMGISEEATIE QLIKIVEGIIAEERKSRQSLLHNDKEGLEDILWRSYGILQYARRVSGKEALSKLSDIQLG VDLEILPFWGKDTFNELVAITRPNFLSKYLGSENLTDTDRDSYRAKVIRQKISN >gi|292596543|gb|ADCV01000005.1| GENE 41 46175 - 46714 280 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764773|ref|ZP_02171827.1| ribosomal protein L24 [Bacillus selenitireducens MLS10] # 1 170 1 169 179 112 34 6e-24 MLCDHCHKNEATIHMTNIINNQKTEQHLCSSCATELQQAGKLSPYSSFMNDMWDNNFFTN DFFKNMVYPDNLLKAHQSKRCPQCGITYDEFNRVGKFGCGQCYETFNSEINPLLERIQGS SEYEGTIPSRGTNVFKAKYEVKQLRRQLDTAIQAENFEEAAILRDKIKNLEVIIDGDNE >gi|292596543|gb|ADCV01000005.1| GENE 42 46721 - 47200 222 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 1 157 1 151 158 90 33 3e-17 MSMIADKIEKFILDRMREEQEKLILKRNELADELDCAPSQISYVLSTRFSNERGFDVESR RGLGGYIRIKKINPESSDSLPAVTTYRIYEGPNTVERLIDMRDVDQSLFQLLQSEKITRR EAQLMHNSFATLIENVDVEERNDAVRQLYASMVDTLRKE >gi|292596543|gb|ADCV01000005.1| GENE 43 47414 - 47920 574 168 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1025 NR:ns ## KEGG: Vpar_1025 # Name: not_defined # Def: S-adenosylmethionine decarboxylase related protein # Organism: V.parvula # Pathway: Cysteine and methionine metabolism [PATH:vpr00270]; Arginine and proline metabolism [PATH:vpr00330]; Metabolic pathways [PATH:vpr01100] # 1 168 1 168 168 300 100.0 9e-81 MAEALGQELLIDLYSCDEDAISSATAVQESVATAFDLAELDVDEISCQVMDEEIALLSVA PGFHFTLHTYPALGYVAVDLYSFEQTLPLTLIMKALRKSFRAEKVKATSVQRGDFGNERD MKPRRKTKITTLGRVSRTRIQLKQTGGKLKKQSAKVIKTLAKKSGLKK >gi|292596543|gb|ADCV01000005.1| GENE 44 48001 - 48684 819 227 aa, chain - ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 1 214 1 208 216 155 42.0 7e-38 MKKTILFDLDGTLTDSQEGILKSIKFALEHFGYTVPDEETLQLFLGPPLVDAFQEHCGLT FEQAEETYFKFRERYGTIGKFENKVYPNIVDLLAKCKTEQYTIAVATAKPEHYAKDILDH FELTPYFDVIVGANYEAGLLHKKEILEKALTLCGNPLTDENGRRLTFMVGDRKYDVEAAN ELGCISIGVTYGYGTESELKEADAEYICDDVDEIADVLNLEEMMVRR >gi|292596543|gb|ADCV01000005.1| GENE 45 48686 - 49111 629 141 aa, chain - ## HITS:1 COG:CAC3292 KEGG:ns NR:ns ## COG: CAC3292 COG0822 # Protein_GI_number: 15896537 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 141 1 141 143 183 65.0 7e-47 MEMDQLYTELILEHNQDKRNKHELSEFTNSEHGHNPSCGDDLTLQLNVVDGIIKDAAYTG SGCAISQASASMMIDIIKGKSVEEALRLVEIFLGMIKKEITDENELEELEDAMALQNISN MPARVKCAVLAWHTLKEALKK >gi|292596543|gb|ADCV01000005.1| GENE 46 49126 - 50355 1471 409 aa, chain - ## HITS:1 COG:CAC3291 KEGG:ns NR:ns ## COG: CAC3291 COG0520 # Protein_GI_number: 15896536 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 9 407 7 406 408 464 56.0 1e-130 MRPIAEAYKDFPILHKEHNGHRVIYLDSGATAQIPQSVIDRVVEHMTQRNGNPHRGSHIL AIEASEDYENARDRVVEFINAREREEVIFTRNSTESMNLIAHSYGLHNVKKGDKIVITVA EHHANLVTWQYVAEQTGATLEYMYLDEHGHLKDGEINKIDEKTKIVAFAHVSNVLGMEFP VKELTEKAHSVGAIVVLDGAQSTPHKKIDVQALDCDFFVFSGHKMCASQGIGVLYGKRDL LETMPPFLLGGDMIEYVKEQTATFNELPYKFEAGTPNADGAVSLHAAIDYLESFGMDAIE AYEEELVAYILPKIVELPHVHVIGSQNPKEKHGVIAFTVDDVHPHDVATILDSKGICVRS GHHCAQPLGAFYNVSASTRLSMYLYTRKEDLDAFLEVLKTVRSVMGFKD >gi|292596543|gb|ADCV01000005.1| GENE 47 50368 - 51414 1209 348 aa, chain - ## HITS:1 COG:CAC3290 KEGG:ns NR:ns ## COG: CAC3290 COG0719 # Protein_GI_number: 15896535 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 94 348 109 363 366 171 39.0 3e-42 MSELLFNELPRPTFRWLRVNHTVSSLAGEDTAVQSIAVEANKNILSPLPVGTALLDGNYE GANKEAVHVLVEKAEGYAINVPPKAKEVVGIRIDANARVANRFQFIVGEGAELEVQFYVT GSGDALTNVSYLNEYDVKEAGKVVVKKVNLLPEHVQHIEHRYTKLEEKADVEYINIEIGG SENILNYYHDLVGQESRMVHDIAYLGNKEQKFDISMVMSHGGKKSFSDIHTLGALSGNSK KSFRGTLDFLNGATASEGAEEDTCLLLDPTVKSVSLPLLLCKEDNVVGNHAASAGQIDHN KLFYIMSRGFSEVEAKHIIVESMIRPIIDRIGDETIEEAALAAVRNKI >gi|292596543|gb|ADCV01000005.1| GENE 48 51424 - 52833 1677 469 aa, chain - ## HITS:1 COG:CAC3289 KEGG:ns NR:ns ## COG: CAC3289 COG0719 # Protein_GI_number: 15896534 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 3 467 2 466 466 702 72.0 0 MEERKKTQVADMDRGVYDIKNEFEYSYISDAGLTEDIIREIWSNKNEPEWMLDFRLKSLE IYNRMGIPNWIPDISGLDMANIHTYVKPKVDMKENWDEVPEEIKSTFDRLGIPEAEKTSL AGVGAQYDSEVVYHSIQEDLVKQGVIYTDIETALHEHEEIVKKYWMTLIPPTDHKWAALH GAVWSGGSFVYVPAGVQVEIPLQSYFRLNAPGAGQFEHTMIIVEEGAKLHFIEGCSAPKY DVSNLHAGAVELFVKDNATLRYSTIENWSKNMYNLNTKRCVVGKNGTIEWVSGSFGSKVS CLYPMSILNGEGAHAEFTGVTFAGEGQFLDTGCKVVHNAPYTTSNVNSKSISKSGGAAIY RGLLKIGPKAEHSKATVSCESLMLDAESQSDTIPAIIVENDNVDLGHEAKIGRISDEAIF YLMTRGISEEEARAMLVRGFVEPISKELPLEYAVEMNNLINLELEGSIG >gi|292596543|gb|ADCV01000005.1| GENE 49 52842 - 53585 185 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 14 229 32 246 329 75 27 6e-13 MAELLQIKDLKVSVEEKQILKGIDLTINKGEIHVVMGTNGAGKSTLANAIMGNSTYTVDS GSIIFDGKDITEDAVNDRAKAGIFMSFQNPISIPGITVENFIRTAKSTITGENVRALSFK KELKEKMDELSFDLSYAQRYVNEGFSGGERKKNEILQMSILNPKLAILDETDSGLDVDAV RIVSEGVQRFHNEENAVLIITHHNQILQKLKPDYVHVLINGKIVKTGDASLVREIEEKGY DAYKALA >gi|292596543|gb|ADCV01000005.1| GENE 50 53880 - 55136 1232 418 aa, chain - ## HITS:1 COG:MA0726 KEGG:ns NR:ns ## COG: MA0726 COG0019 # Protein_GI_number: 20089611 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Methanosarcina acetivorans str.C2A # 1 418 1 416 420 556 62.0 1e-158 MNKKTVPFTSEQLENIIAQYPTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPN PYIMRLLQKLGVGADCSSLAELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLD DITHIEYLEKNHGSLPDTFCVRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQA KGVKHFGIHTMVVSNELDIDGLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPE QTPVDFRVLSKGVEEAYNRILVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHY IGLDACMANLMRPALYGSYHHITVMGKENDPKDHVYDVTGSLCENNDKFAIQRELPKIDI GDRVIIHDAGAHGHSMGFNYNGKLRSAELLLHKDGSVTQIRRAETYDDLFGTLDFSNL >gi|292596543|gb|ADCV01000005.1| GENE 51 55200 - 55616 597 138 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1033 NR:ns ## KEGG: Vpar_1033 # Name: not_defined # Def: DoxX family protein # Organism: V.parvula # Pathway: not_defined # 1 138 1 138 138 216 100.0 2e-55 MLNFIFKSKPNYVNFGLLIYRLALGISMFYHGYLKWLSGAEGLYKVGTMLAPLGVSGGYE MLGTMAALAEMIGGILIAVGLFTRIGAILVVGTLATATIVSLNGSFFSWDYPSQLGFGAL MLFFAGAGRFSLDKALFK >gi|292596543|gb|ADCV01000005.1| GENE 52 55958 - 57583 1610 541 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 541 3 547 547 624 60 1e-178 MAKEILFNEEARRALGRGVDQLANAVKVTLGPKGRNVVLDKKFGSPTITNDGVTIARDIE LPDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIQEGMRNVAAGANPMILKKGIE TAVKTLVEEIKKRSIKVSGKAEIAQVASVSAADEEIGGLIAEAMEKVGNDGVITVEESKG LQTALNIVEGMQFDRGYISPYMVTDPDRMEAVMDNPYILITDRKISAIADMLPTLEKVVK VGKELLIIAEDVEGEALATLVVNRLRGTFKAVAVKAPGFGDRRKAMLEDIAILTGGTVIT EDMGRKLDSVELEDLGTARQVRITKDETTIIDGAGDKDVIAKRVNQIRAQVEETSSDFDR EKLQERLAKLSGGVAVIEVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTTFIDI IPALNTLEATGDVQTGINLVKRAVEEPLRQIAYNAGLEGSVVVEKVKNTEAGVGFNALTE EYIDMVKAGIVDPAKVTRSALQNAASIASLVLTTETIVADKVDENAAVPAMPPMGGMGGM M >gi|292596543|gb|ADCV01000005.1| GENE 53 57696 - 57977 555 93 aa, chain - ## HITS:1 COG:BH0561 KEGG:ns NR:ns ## COG: BH0561 COG0234 # Protein_GI_number: 15613124 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Bacillus halodurans # 1 93 1 93 94 106 63.0 1e-23 MLKPLADRVLIRLEAKEEKTKSGIFLPDTAKEKPQEGVVVAVGAGKVYDNGQRVAPEVKV GDTVMFAKYAGSELEIDGATHLIISERDILAVL >gi|292596543|gb|ADCV01000005.1| GENE 54 58109 - 58687 801 192 aa, chain - ## HITS:1 COG:lin1136 KEGG:ns NR:ns ## COG: lin1136 COG3707 # Protein_GI_number: 16800205 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Listeria innocua # 2 183 7 189 193 151 42.0 7e-37 MRVLIVDDESLIRMDLRDIIESCGHEVVAEGTNGVEALALCKKYKPDIILMDVKMPELDG IEAARQIGFHHEAPVVLLTSYSQQDLIDKARDSGVYGYLIKPVREEQLVPTLEMALGRYK SDAQLREKMAELEQSLEDRKIIQKGTGILMELYSISEVEAYNRIRTLSMNKQISIIETCN LIIKQSNKSNNI >gi|292596543|gb|ADCV01000005.1| GENE 55 58688 - 60079 880 463 aa, chain - ## HITS:1 COG:FN0077 KEGG:ns NR:ns ## COG: FN0077 COG3920 # Protein_GI_number: 19703429 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 100 448 106 448 462 136 30.0 8e-32 MDIGQDILNRTPLGPLQTSLLEHISKLISFGESLTRQRIQIFTPLLETGQGERSQQCADM LCIERSDQGITTRQLKGSHTWHAMMKDGQPLIGLDDKQRQHVFPIVDNGGRIIGGISFTL SPSIKAEQYEQEYLLSDTMQRLMLTATDEQIVSYEPMSYFDGLIIFDDTYKILYANDAAM KLVDVLGFDRRLVGSSIFSSTLKMSAIQQVLSDRSILTNEEIYQDMVIRQHMIPIAMGRN ETRCFLVLHDCTRESKQQQELLVKNSIIKEVHHRVKNNLQTVAGLLRMEARRSSLPDVKQ ALQEGINRIESMALVHDIVSHYDEDYIGIRSIYDELCRLLRMSMVRQDQEVTFTYSGEDM LISPHMASYVSLIINELITNSLEHGLDGNRGNVHLAVTDAGNTIKLAFTDNGKGLPSDFS VSSNKQLGLTIINNLVTHELKGSLSIENTGTGVLVTIYMKKEA >gi|292596543|gb|ADCV01000005.1| GENE 56 60082 - 61113 796 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227425790|ref|ZP_03908856.1| SSU ribosomal protein S18P alanine acetyltransferase [Atopobium parvulum DSM 20469] # 6 336 481 818 832 311 46 9e-84 MSIYTLALESSCDETSASVLKDGRTVLSNVISSQVPIHRKFGGVVPEIASRHHIEQVIPV IDQALRDANVTLQDINHIGVTYGPGLVGALLVGVAAAKGLSFATGIPLVPVHHMEGHIFA NFLANPELEPPFLSLVVSGGHTMLVHVKGYEEFDVLGQTRDDAAGEAFDKIARVMGFPYP GGPHIDALAVEGNPEAIEFPKALSEPGNFEFSFSGLKSAVLNYLNSKQQKNEPINQADVA ASFQKAIVDVLVEKTKDAAHTLGESRITIAGGVSANKGLQKALEAMCVEEGFTYYKPHKI LSTDNAAMIGCRAYYMAQAGKFGDLTLNAKPSVEIGYVSWKEE >gi|292596543|gb|ADCV01000005.1| GENE 57 61110 - 61559 303 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|125974278|ref|YP_001038188.1| SSU ribosomal protein S18P alanine acetyltransferase [Clostridium thermocellum ATCC 27405] # 1 141 6 146 152 121 41 1e-26 MEIRLATIDDAQAIYAIEQQSFSVPWSLESVLVELEGASNKLYMVICEENKIVGYAGAWL VYDEGQITNIAIIPSARGKGYGSKLTKQLIDECLTRGMKEIFLEVRISNLAALAMYRNLG FSVKGIRKDYYSEPTEDAYIMSLVSEEIE >gi|292596543|gb|ADCV01000005.1| GENE 58 61559 - 62317 218 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 42 239 2 193 380 88 30 7e-36 MWLGIETSSLVSSVALMDESCLIGELTIQAGLTHSEQLVPHIDMLLRTCQVEKSELKGIM VSIGPGSFTGLRIGMGTAKAMAYALQIPLYGVMTMDSLARNVAYTDRTICTIIDAQKKHV YAGIYKYDDNELVCKEEPFVIAANDLLDRLRASEEHVVFLGDGVKRIEKLLDESDTNLTI LDISQRIPKASSLLLAGRRLVDSEESSDPMDMVPYYIRRSEAEVLWEERHKDNPEMLNQN PAVIVTEAAGVE >gi|292596543|gb|ADCV01000005.1| GENE 59 62301 - 62795 427 164 aa, chain - ## HITS:1 COG:BS_ydiB KEGG:ns NR:ns ## COG: BS_ydiB COG0802 # Protein_GI_number: 16077658 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Bacillus subtilis # 6 145 3 138 158 95 41.0 3e-20 MKDKVQVHLKTYTVEDTQQFGKLLGAWVKQNGDPLCIALVGDLGTGKTHLSQGIAKGFGV TEEITSPTFAIMNTYDVNRNHLYHFDVYRLEDISELENIGFYEYTEDCVSIVEWADKFPH ELPDETLWIYLTRIDDTSRSITLVSDYLTPDDLVEIGGPYVVGN >gi|292596543|gb|ADCV01000005.1| GENE 60 62785 - 63765 940 326 aa, chain - ## HITS:1 COG:BH0544 KEGG:ns NR:ns ## COG: BH0544 COG0611 # Protein_GI_number: 15613107 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Bacillus halodurans # 8 323 4 326 328 225 39.0 9e-59 MQLKDVGEFNFIRQIQDNTIYNPNTVVYGIGDDCAIYKAEQNTEQLISTDTMVEGVHFSF HYMMPYDVGYRLMTANLSDVAAMGGIPRQIVLSVAVPDHVDTVILDEIYRGIKDQCMRYQ LNILGGDTVRTEGPMVWTVTIIGEVPKGTAVMRSGAKVGDVVGVTNYVGYAATGLGALSY NLVGYDMTKVGHQRPEPQIELGQKLRRLGIHSMNDISDGLGSELNEIAVASNVSIVFEEQ AIPLHEETYELAKHLQTNPVDYALYGGEDFQLVFTAPKSLLSELEKLSGITLIGEVLSGP PRVQMVTSDKTIKTVEAKGYNHFHEG >gi|292596543|gb|ADCV01000005.1| GENE 61 63878 - 64438 733 186 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1043 NR:ns ## KEGG: Vpar_1043 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 186 1 186 186 321 100.0 1e-86 MKLRKQVLSILCVGMLAFVVGCTHEQAPTTGKSEPTQETKVNKDAETSKVSQEKVKMAFF VPTEDGSGVKQTTVEIEANKVTPKAALLAMLNADRAQKYPVFSKDIEITSVTVKDGIASV EVNDAFVKGNGGDLTVKLQMAAIVNTLTSFDNINGVLFVNNGKKVPTVGSFDTKEPVKRM TNLIKK >gi|292596543|gb|ADCV01000005.1| GENE 62 64442 - 65290 913 282 aa, chain - ## HITS:1 COG:slr1744 KEGG:ns NR:ns ## COG: slr1744 COG0860 # Protein_GI_number: 16330376 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylmuramoyl-L-alanine amidase # Organism: Synechocystis # 49 280 438 646 649 132 36.0 8e-31 MDSAIASSAKLSQDGRDVKVTIKTPSSIDTSDVKVFSLKKDTVNKKPYRIVVDVQKKGAV AKPAYYGKKPSQSAHPAKNVPTGSGKYSTSGGLSGKTITIDPGHGGSDSGAIGPHGVQEK NITLPISMYLKKSLENRGAKVLMTRTTDVDVYGPNASGVDELGARVNVANRSNSDALVSV HINAFNNPSVGGIATYYYSKTGNDARLAQKVQSQIANTPGFNGDRGIQEGNLYVLRHSNM PAILVELGFISNPNEERVLQSPQTQEDFANRIANGIANYFGG >gi|292596543|gb|ADCV01000005.1| GENE 63 65295 - 65480 143 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFSLAVFSFVFFKVTVVVFPSLLIDADAFIGADKSITIRTYGTGASVLVTHRASSKLAAF A >gi|292596543|gb|ADCV01000005.1| GENE 64 65784 - 66728 1082 314 aa, chain - ## HITS:1 COG:CAC0946 KEGG:ns NR:ns ## COG: CAC0946 COG2333 # Protein_GI_number: 15894233 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Clostridium acetobutylicum # 58 313 40 287 320 162 37.0 9e-40 MTNRIQRFIVFLLVLCIPIFAIAGCTNNDVANAANQVTTNANGTYSIDTKTTTPEGKLDV YMLDIGQGDAILLKVGDEYNMIDTGDIEHRENIVAQLKAMGVTKLKNIIITHPHADHMGG FYAIAKAMPIEHVYDDGIAVDNNMYKTYEKWIEKNKIQRTTLRSGDVVDFGHGAVFVVYA PWVEPLTDKKGETDLNNNSIVGKLIFGKFSMLFTGDAELQEEKKLIKEQNSRLFSRILKV GHHGSRTSSSEDFLKSIKPESALISNGMYNKYGHPHDVTLRRLQENNIAIYRTDTMGRIH ISTDGNEWQITTER >gi|292596543|gb|ADCV01000005.1| GENE 65 66725 - 68302 472 525 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225086616|ref|YP_002657886.1| ribosomal protein S15 [gamma proteobacterium NOR5-3] # 1 495 7 473 497 186 29 3e-46 MNILTTEDARFIDREVPKQLGISLEILMENAGRGIVDALWGEYDLFSLNNGRSINSFVLF ICGTGNNGADGLVAARHFMEQGVPVQIVLVGNTNKCSDLFAVQIERCKAMGCIIDMYDEF NDWSNVAIAVEGIMGTGFTGRLREVTIDILNDIDTMRSQYNFDLWAIDVPAGLDATTGHV AEGTLTYDYTVTFGAIKQGLLLYSGKAIGGTAVVAPLGAPWQQVLGERVRTITIDSDLAE KIINYRTPMAHKGVNGNTLIIGGSNDMIGAPILAAEAAVHSGAGKVTLAVPKIIKQIVQS RVIPEVMVTSTETNKELFDCRQVVAMGPGLGRTREICDLVDHILDAYEGALVLDADALYA LGHVGCVNKDALRDGDIESAYTVERELPFCVMTPHLGEFSRLIDLPIKWIERHYITLARE FAKAHQVILVLKGIPSIVALPDGTVYVNTIGNAGMGTGGMGDVLTGVIAGFISQGYSLQD SAVLGVYVHSRSADILNETKSWGYTPSDVSTSLGCVISELLGDYE >gi|292596543|gb|ADCV01000005.1| GENE 66 68304 - 68675 250 123 aa, chain - ## HITS:1 COG:ECs1284 KEGG:ns NR:ns ## COG: ECs1284 COG0736 # Protein_GI_number: 15830538 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Escherichia coli O157:H7 # 1 120 1 121 122 84 41.0 5e-17 MKLGNDIIEIDRIRQAIEKSSSFKVRVYTIHEIEYCKSRNKGCYESFAGIYAAKEAFIKA LGTGMRHGSWQDIEIYHDEWGAPLIRLQDTFKDIYETSGYTDIHVSISHCKDYAMSTVIL EGA >gi|292596543|gb|ADCV01000005.1| GENE 67 68744 - 69535 623 263 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1048 NR:ns ## KEGG: Vpar_1048 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 263 1 263 263 456 98.0 1e-127 MDQGVIDYITNIFDIPKLTQQVSSVQMPLPLSRLAEIPLDGSVNQCQGFCYNSKKDVFAL ACINSDNTKQIIYEINPKTFTVVAKYEYSYKSLLGHMNTLTYNSVNNRYYTTNAVVNGYN LTPIEADSMIVEAPIKLKEKVFNFAYDKVRNEYVSIVPLTNSERTINYYDSNFNRIRSYK IDANHTNLNNNGAYATNGNTLFTTLTTFVYVDEEGVVKNISPYASGMEVEDMDCRNGQMY MAVNRKGKVEIYSLSSLPFSVNV >gi|292596543|gb|ADCV01000005.1| GENE 68 69768 - 70529 577 253 aa, chain - ## HITS:1 COG:sll1108 KEGG:ns NR:ns ## COG: sll1108 COG0496 # Protein_GI_number: 16332288 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Synechocystis # 1 235 7 252 275 153 37.0 3e-37 MHILMCNDDGILADGLRHLASYLSQYYRITVVAPANEQSAKSHALTTEVPLKLDACNGED ENPRLYALTGTPSDCMKFGLSYLLTDDMPDLVISGINHGFNLGSDVLYSGTVSAAMESGF YGIPGLALSVERYSVERGDEMHPFIHELIEKIYVAGQFSGLLNVNFPLRGTCDWDHFKMV SQGLQTYSNIIEARINSRGQDYYWLAGELDYGAESVPTDVEFARKGYITGVALTWKQQCD TDMKRVQNILDEI >gi|292596543|gb|ADCV01000005.1| GENE 69 70547 - 71809 1144 420 aa, chain - ## HITS:1 COG:CAC1691 KEGG:ns NR:ns ## COG: CAC1691 COG1215 # Protein_GI_number: 15894968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 16 408 19 422 425 370 43.0 1e-102 MNYLLDLLLIPMQVIIVIYTVYYFILAVVGMWRSRVHKNYTPKNSFAIVVCAHNEEAVVG ELVKNLRGLDYPDDLYDIFVVADNCTDKTAEVASAAGANVHVRENKQEIGKGYAMGWMFD RVEQMDRKYDAFLIFDADNLVHPQFMLEMNDHLEKGESVIQGYLNSKNPTDSWVAGTFSI AFWMVNHMWHLAKYRLGLSTALGGTGMCIRTSIIREYGWDCNSLTEDMEFSMKLLTHGIR TCWGHDAIVYDEKVTTMMASCRQRLRWAQGQFDCAGRYIPKLFAIGIKTGNIMILDGIFQ VSQPYFLLLTTVYLVLSYINAYTPIYTNILYQIMPMSVWTIIGVGQYLFPLIVLLKIKVP PKIWFYYLLYPLFVYSWIPVNILGWFRRHNKVWSHTVHTRAVGLDDVKLTRMGNMNKNEK >gi|292596543|gb|ADCV01000005.1| GENE 70 71829 - 72500 685 223 aa, chain - ## HITS:1 COG:Cj1114c KEGG:ns NR:ns ## COG: Cj1114c COG1183 # Protein_GI_number: 15792439 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Campylobacter jejuni # 5 221 10 232 242 119 38.0 6e-27 MNKSIIPNLFTSANLAFGVLGITLSATNNTFCAAICILLSLVADGLDGRVARALNVAGPM GRELDSLSDVVGFGVAPAYMLYMKELNGLGWIAYVPLLAFAVLGAFRLARFNIKTDEVHG YFEGLPIPAAGCLAATYVLCGVSVPQFVLVVCMIGIGLLMVSEVKYPDFKGKSEIYINKL SIVLTAIFVVACLVYDWHTWAVMIFAGYVMFGLINGALNIVRK >gi|292596543|gb|ADCV01000005.1| GENE 71 72493 - 73134 691 213 aa, chain - ## HITS:1 COG:BMEI1491 KEGG:ns NR:ns ## COG: BMEI1491 COG0688 # Protein_GI_number: 17987774 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Brucella melitensis # 5 208 32 237 251 150 37.0 1e-36 MPTGPIIKEGFPLIGAMLIITVVLGYLGHYVIAIISFILALFFVNFFRNPKRVIPQDPDL ILSPADGKIMDITDVYEDIYLHKECKKVTIFLSVFDVHANRAPIDGKITYRHYTMGSFLP AFKDDVGFENERHTICIENDRTSVLVTQIAGLLARRIVSWTDLDSVLERGQLYGMIKFGS CTELYMDKDVELFVEKGQHITGGDTVIGRLRHE >gi|292596543|gb|ADCV01000005.1| GENE 72 73149 - 73871 776 240 aa, chain - ## HITS:1 COG:lin2665 KEGG:ns NR:ns ## COG: lin2665 COG1922 # Protein_GI_number: 16801726 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Teichoic acid biosynthesis proteins # Organism: Listeria innocua # 3 240 4 237 244 167 36.0 2e-41 MNKRISVLSVPIDCVTMDEAVQRILQLTEQPGLHLVATANAEMVMLANENPTLHSILNNA SLVVPDGAGILWAAERQGEHVPERVTGVDVTMELFKVAATHQIPVYCLGAAPGVAQRAIG NVSAQVGALNIAGIHDGFFDSAEEQEIIKSIAESKAKLVFVALGVPKQEQWIAEKLSHLD GVVAIGIGGSFDVLAGNIPRAPEWMQRNRLEWLYRLYLEPQRIGRMLAIPKFMWTVIRNK >gi|292596543|gb|ADCV01000005.1| GENE 73 73887 - 75341 1764 484 aa, chain - ## HITS:1 COG:BH0020_3 KEGG:ns NR:ns ## COG: BH0020_3 COG0516 # Protein_GI_number: 15612583 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Bacillus halodurans # 203 483 1 281 282 381 69.0 1e-105 MRDDKFGMRGLTFDDVLLIPAASDILPNQVELKTQLTRDITLNIPMISSGMDTVTESRMA IAMAREGGLGVIHKNMSIEEQAHEVDKVKRSEHGVIVDPIFLSPQNLLSDAAELMEKYKI SGVPITEHGKLVGIITNRDMRFETDLSRQIGECMTKDSLVTAPEGTSLEAAKAILSEHRI EKLPLVDGDGNLKGLITIKDIEKATKYPNAAKDGSGRLLVGAAVGVSQDLYDRLDALVSA KADVIIVDTAHGHSAGVLRTLKDIKQAYPHIPVIAGNVATAAGTEALIEAGADAVKVGIG PGSICTTRVIAGIGVPQITAVYESAQVGRRYGVPIIADGGIKYSGDIAKAIAAGANVVMM GNILAGTDESPGETVIYQGRSYKVYRGMGSLGAMKLGSKDRYFQTEAKKLVPEGIEGRVP YKGMLADTIFQMVGGLRASMGYCGCHNIQEMIENTQFIQITAAGLKESHPHDVSITVEAP NYSG >gi|292596543|gb|ADCV01000005.1| GENE 74 75418 - 75603 343 61 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1055 NR:ns ## KEGG: Vpar_1055 # Name: not_defined # Def: 4-oxalocrotonate tautomerase # Organism: V.parvula # Pathway: Benzoate degradation via hydroxylation [PATH:vpr00362]; Metabolic pathways [PATH:vpr01100] # 1 61 1 61 61 101 100.0 1e-20 MPIIHVELVEGRTKEQKKQLGEAITKAAVDIVNVPADAVKVIFVDMKKDDYMEGGILRSE R >gi|292596543|gb|ADCV01000005.1| GENE 75 75736 - 77778 2308 680 aa, chain - ## HITS:1 COG:TM0205 KEGG:ns NR:ns ## COG: TM0205 COG1200 # Protein_GI_number: 15642978 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Thermotoga maritima # 9 661 121 774 780 522 44.0 1e-147 MDERLTTIKGIGPGREKQLHKLGITNVTSLLTYFPRTYEDRRTIYSIGDLKSGMTGGVVG TVIAVQEKRPRPRLSILEVVIADGTGPLKIVLFNQGYKKNFYKKGQRIYAYGKAEFQYGY MQMNTPQMENLGDGGEPDRGIVPIYALADGVSQFVVRSTVRNWFAANHELPEILPVEVRE DHHYMSRYDAFKMMHFPDSSELYEKARYQLAYEELFVMQAGLALLRNKEQCHRGSKMGPN GELMAQCIENLPFSLTGDQQRALEDIRIDMEDERPMQRLLQGDVGSGKTIVATLSLLKAI ENGYQGALMAPTEILAAQHYEGIRTVCANLGITIELLTGSSTKKEKECIYEGLADGRIQM IIGTHALIQEGVNFHNLGLVIIDEQHRFGVDQRARLQQKGTYPHVLIMTATPIPRTMTLS VYGDLAVSLIKEMPPGRKPVKTYAVDSSYKERLRTFFGKEMAEGRQVYVVCPLVEESEKL DLQAAEELYLELKEYFYKAYEVGLVHGRMKPSEKDEVMNAFHRGEILLLVSTTVIEVGVN VPNATIMCVEGAERFGLSQLHQLRGRVGRGAHQSYCILVSDSKNDVSQERLKLMEQIQDG FELAEQDLLIRGSGQLFGLAQSGLPDLRVANIIKDIEILVKARKDVLDFANQFGIEKLES IMKEELEKRFGEKFLRILYN >gi|292596543|gb|ADCV01000005.1| GENE 76 78002 - 78190 326 62 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371107|ref|ZP_03854591.1| LSU ribosomal protein L28P [Veillonella parvula DSM 2008] # 1 62 1 62 62 130 98 3e-29 MANLCEVCGKSTSSGMNVSHSHIRTRKTWKPNIQRVRAVVDGATKKVNVCTRCLRSNKVT RA Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:50:01 2011 Seq name: gi|292596542|gb|ADCV01000006.1| Veillonella sp. 3_1_44 cont1.6, whole genome shotgun sequence Length of sequence - 50525 bp Number of predicted genes - 51, with homology - 50 Number of transcription units - 21, operones - 14 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 14 - 967 1259 ## COG0232 dGTP triphosphohydrolase 2 1 Op 2 4/0.500 - CDS 1000 - 1821 814 ## COG1806 Uncharacterized protein conserved in bacteria 3 1 Op 3 1/0.500 - CDS 1832 - 2461 661 ## COG0517 FOG: CBS domain - Prom 2483 - 2542 3.8 - Term 2504 - 2544 5.3 4 1 Op 4 . - CDS 2560 - 4941 3107 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase - Prom 4989 - 5048 8.8 - Term 5038 - 5081 7.1 5 2 Tu 1 . - CDS 5087 - 5341 253 ## gi|294793858|ref|ZP_06758995.1| hypothetical protein HMPREF0873_00443 - Prom 5438 - 5497 3.8 + Prom 5464 - 5523 10.7 6 3 Tu 1 . + CDS 5566 - 5649 58 ## - Term 5768 - 5818 1.1 7 4 Op 1 . - CDS 6019 - 6261 146 ## gi|294793860|ref|ZP_06758997.1| Zn-dependent protease with chaperone function 8 4 Op 2 . - CDS 6258 - 6875 569 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 6964 - 7023 7.6 - Term 7055 - 7094 8.6 9 5 Tu 1 . - CDS 7102 - 8310 353 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 8333 - 8392 11.6 + Prom 8228 - 8287 7.8 10 6 Tu 1 . + CDS 8468 - 10558 2115 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 10579 - 10614 6.1 - Term 10635 - 10673 6.2 11 7 Op 1 2/0.500 - CDS 10712 - 13090 2391 ## COG1193 Mismatch repair ATPase (MutS family) 12 7 Op 2 . - CDS 13104 - 15527 2440 ## COG0826 Collagenase and related proteases - Prom 15555 - 15614 3.7 - Term 15549 - 15605 16.3 13 8 Op 1 40/0.000 - CDS 15616 - 18060 3216 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 14 8 Op 2 . - CDS 18070 - 19092 1524 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 15 8 Op 3 . - CDS 19129 - 19593 587 ## Vpar_1069 thioesterase superfamily protein - Prom 19632 - 19691 8.2 - Term 19700 - 19754 14.1 16 9 Op 1 36/0.000 - CDS 19819 - 21030 497 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 17 9 Op 2 24/0.000 - CDS 21023 - 21745 282 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 18 9 Op 3 . - CDS 21758 - 22840 1403 ## COG0845 Membrane-fusion protein - Prom 22862 - 22921 8.1 - Term 22970 - 22998 1.0 19 10 Op 1 . - CDS 22999 - 23958 789 ## COG0205 6-phosphofructokinase 20 10 Op 2 . - CDS 23885 - 24727 695 ## COG0703 Shikimate kinase - Prom 24755 - 24814 5.1 - Term 24773 - 24826 12.1 21 11 Op 1 . - CDS 24847 - 25365 284 ## Vpar_1075 hypothetical protein 22 11 Op 2 . - CDS 25244 - 25528 259 ## gi|294793873|ref|ZP_06759010.1| hypothetical protein HMPREF0873_00459 - Prom 25556 - 25615 6.2 - Term 25689 - 25753 5.8 23 12 Op 1 . - CDS 25824 - 26678 557 ## Vpar_1076 hypothetical protein 24 12 Op 2 . - CDS 26688 - 27095 363 ## Vpar_1077 hypothetical protein 25 12 Op 3 . - CDS 27076 - 27630 446 ## Vpar_1078 hypothetical protein - Prom 27652 - 27711 6.0 26 13 Op 1 . - CDS 27729 - 28049 185 ## Vpar_1079 hypothetical protein 27 13 Op 2 . - CDS 28093 - 28554 408 ## Vpar_1080 hypothetical protein 28 13 Op 3 . - CDS 28533 - 29075 276 ## Vpar_1081 peptidase A24A prepilin type IV 29 13 Op 4 10/0.000 - CDS 29129 - 29575 680 ## COG2165 Type II secretory pathway, pseudopilin PulG 30 13 Op 5 3/0.500 - CDS 29612 - 30787 665 ## COG1459 Type II secretory pathway, component PulF 31 13 Op 6 2/0.500 - CDS 30796 - 31815 640 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 32 13 Op 7 . - CDS 31799 - 32809 865 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 32892 - 32951 4.6 - Term 32933 - 32976 7.7 33 14 Tu 1 5/0.500 - CDS 32998 - 34281 1882 ## COG0148 Enolase - Prom 34321 - 34380 6.5 - Term 34326 - 34366 0.7 34 15 Op 1 8/0.000 - CDS 34399 - 35925 1466 ## COG0696 Phosphoglyceromutase 35 15 Op 2 13/0.000 - CDS 35939 - 36709 833 ## COG0149 Triosephosphate isomerase 36 15 Op 3 26/0.000 - CDS 36711 - 37889 1629 ## COG0126 3-phosphoglycerate kinase 37 15 Op 4 5/0.500 - CDS 37903 - 38913 1355 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Term 38940 - 38979 -0.4 38 15 Op 5 . - CDS 38981 - 40006 801 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 40098 - 40157 12.6 39 16 Tu 1 . - CDS 40246 - 40872 921 ## COG0035 Uracil phosphoribosyltransferase - Prom 40994 - 41053 4.5 - Term 40957 - 41003 9.6 40 17 Op 1 . - CDS 41057 - 42289 1954 ## COG0112 Glycine/serine hydroxymethyltransferase 41 17 Op 2 2/0.500 - CDS 42336 - 42773 632 ## COG0698 Ribose 5-phosphate isomerase RpiB 42 17 Op 3 3/0.500 - CDS 42785 - 43231 582 ## COG0394 Protein-tyrosine-phosphatase - Prom 43267 - 43326 8.5 43 18 Op 1 10/0.000 - CDS 43344 - 44375 927 ## COG0009 Putative translation factor (SUA5) 44 18 Op 2 32/0.000 - CDS 44377 - 45246 444 ## PROTEIN SUPPORTED gi|223485211|ref|YP_002587537.1| ribosomal protein L11 methyltransferase 45 18 Op 3 . - CDS 45239 - 46321 1479 ## COG0216 Protein chain release factor A 46 18 Op 4 . - CDS 46324 - 47214 877 ## COG3872 Predicted metal-dependent enzyme - Term 47228 - 47261 4.0 47 19 Op 1 . - CDS 47287 - 47484 358 ## PROTEIN SUPPORTED gi|227371063|ref|ZP_03854547.1| LSU ribosomal protein L31P 48 19 Op 2 . - CDS 47564 - 47833 429 ## COG4443 Uncharacterized protein conserved in bacteria - Prom 47876 - 47935 1.8 49 20 Op 1 . - CDS 47938 - 49383 1832 ## Vpar_1102 hypothetical protein 50 20 Op 2 . - CDS 49385 - 50020 710 ## COG0177 Predicted EndoIII-related endonuclease - Prom 50094 - 50153 8.9 + Prom 50052 - 50111 6.0 51 21 Tu 1 . + CDS 50144 - 50413 482 ## Vpar_1104 protein of unknown function DUF896 Predicted protein(s) >gi|292596542|gb|ADCV01000006.1| GENE 1 14 - 967 1259 317 aa, chain - ## HITS:1 COG:AGc3147 KEGG:ns NR:ns ## COG: AGc3147 COG0232 # Protein_GI_number: 15889019 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 25 311 59 419 426 211 39.0 2e-54 MLLSPYAAKSRDAIRDIEEEPDPLRTAFQRDRDRIIHSKCFRRLKHKTQVYIAPGDHYRT RMTHTLEVGQIGRTVARALRLNEDLVEAIAMGHDVGHTPFGHVGEYALRDMVGHFNHNEQ SLRMVEVLERHGDHQGLNLTTAVRDGIVGHTGTTIPVTLEGQIIRIVDRIAYLCHDFDDA QRAGMLTAEALPFEVREHFGMTPSSMITAMVEDMVRESLDKPAISMSADVEMTMNLFRQF MFKHVYLAPALIPDRKKASHVVKNLFTHFMEHPDDMEGCETGKAFYSTRDVVDYVAGLTD QYAIKLFKQYYIPNITL >gi|292596542|gb|ADCV01000006.1| GENE 2 1000 - 1821 814 273 aa, chain - ## HITS:1 COG:BH1373 KEGG:ns NR:ns ## COG: BH1373 COG1806 # Protein_GI_number: 15613936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 5 266 9 270 270 280 53.0 3e-75 MAEKIIYAISDSLGETAEAVARATASQYDKEQIEIVRVPYIDSESQIDEVIDDAKRGNHV ICHTIVSASLRKYLHEKVAEYNIPAVDIMGPVLDAVGTIATTKPRMTAGMVHKLDQEYFK KVEAIEFAVKYDDGKNPSGFEKADIVIIGVSRTSKTPLSMFLAYKKIKAANLPLVPEVPL PEELFKIPAKKIVGLIIDPYKLNNIRSERLRAIGLEDEANYASIERIQSELDYAKAIMRR LHCQVLDVSNKSIEETASLVMQLIDKNRASEGK >gi|292596542|gb|ADCV01000006.1| GENE 3 1832 - 2461 661 209 aa, chain - ## HITS:1 COG:SA1393 KEGG:ns NR:ns ## COG: SA1393 COG0517 # Protein_GI_number: 15927144 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Staphylococcus aureus N315 # 1 204 1 202 207 182 47.0 4e-46 MKLSKRQEQIAQIVREEGPVTGSAIAEHLEVTRSALRSDLSVLTMLGVLDARPNVGYYYV GLSKETQTAERLKSFLVSDVLSQAVVVNGDTSLYDTIVTLFTEDVGTILVCDGSYLVGVV SRKDLLRASMGQTDSHTMPISMIMTPVSKVISVEPTDTLVEAAQKMIDYEVDCLPVVVRE DIGNKKRLKVVGRVSKTTVAKVFLECSIH >gi|292596542|gb|ADCV01000006.1| GENE 4 2560 - 4941 3107 793 aa, chain - ## HITS:1 COG:SSO0883 KEGG:ns NR:ns ## COG: SSO0883 COG0574 # Protein_GI_number: 15897773 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Sulfolobus solfataricus # 1 787 10 799 799 709 48.0 0 MNRETAYVLWFDELQREDVNLVGGKSSSLGELTSSTNVPVPYGFATTAHGYREFMKATGL EDKIRAELDALDDVENSALLREVCAKIRRMICQEEMPKDLADAIRHAYEELGKKVNEENP FVAVRSSATAEDLPDASFAGQQDTYLNVRGADVIIEKVKECYASTFTDRATYYRVKQGFD HMTVALSAAVQMMVFSKAAGVMFTVDLVTGNDNNILIEGSWGLGEYVVQGTVTPDNFRVD KEKMEITDRMINDKHVRLVRKADGDCVEEVVPADEAKKQVITDAQVLELAEYAKAIEKHY GCYMDMEWGVDERDGRIWILQARPETVWSRKEKPETTEKASTLDAGNREIIVKGLPASPG NAAGKAHVIINPEDIDEFKEGEILVTAMTAPDWVPAMKKAKAIVTDAGGMTCHASIVSRE LGIPCIVGTKSRSHEATTSIKDGQMITVDATNGIVYDGVLEDIVKKPKAQVSTGAAAEYV PVTGTKIYMNLGDPDLAQKYGVLPCDGIGLMREEFIWTTFIHEHPLHLIETGRSDFAVNT LAEGMRKVCQALAPRQVVVRLSDFKSSEYRDLKGGDKYEPHESSALLGWRGASRYYDPKY TPAFKLELEAIKKVRNEFGFKNLQVMIPFCRTVEEAELVTNLMAQEGLARSKDFKVWLMA EIPSNIILADQFNKYVDGYSIGSNDLTMLVLGCDRDNETVQHIYDERNLAVRRAIRHLIE VAHKDGKTVSICGQAPSVYPELCEFLVKSGIDSISVNPDAVVNTKKMVAQIEQRIMLDAM TGRGRQESDELIW >gi|292596542|gb|ADCV01000006.1| GENE 5 5087 - 5341 253 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294793858|ref|ZP_06758995.1| ## NR: gi|294793858|ref|ZP_06758995.1| hypothetical protein HMPREF0873_00443 [Veillonella sp. 3_1_44] # 1 84 36 119 119 162 100.0 9e-39 MSYGQYSRGEWVQYLDMKVSPDYKTVMPQTLETITYIFPNSKVEKIETSEATLLYRITLE DGILFVNGSDMKPDQLRFIVHVSN >gi|292596542|gb|ADCV01000006.1| GENE 6 5566 - 5649 58 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIILLFFLVVVKIYTYLKKETQKSLYL >gi|292596542|gb|ADCV01000006.1| GENE 7 6019 - 6261 146 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294793860|ref|ZP_06758997.1| ## NR: gi|294793860|ref|ZP_06758997.1| Zn-dependent protease with chaperone function [Veillonella sp. 3_1_44] # 1 80 1 80 80 102 100.0 7e-21 MKPEFVPWLWIIYVAYVLHKRYKENSHLEKYEIILAIISLIFVCGGYFLMIYYNLSETGI FFVNLFFVLFMILIKVVFGV >gi|292596542|gb|ADCV01000006.1| GENE 8 6258 - 6875 569 205 aa, chain - ## HITS:1 COG:BH1281 KEGG:ns NR:ns ## COG: BH1281 COG0494 # Protein_GI_number: 15613844 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Bacillus halodurans # 3 202 5 205 207 123 35.0 2e-28 MDKKLSNLLSQREHTVLTDIDVITAAVAVPLLEIDGEDHMVFTVRSNTLRRQPGEISFPG GHCEPNDKSGAHAAMRECSEELGIDLDQIELLGNLDCLVSAIGVKLYAVAVRLHTSDLKP NSDEVGEVFTVPLQYLLDMEPTVGHLDIGTKPLKDFPFHLLEGYNIDWKIRQNYSVYFYP YKQYTIWGLTGRVLKNFLDIYRDVK >gi|292596542|gb|ADCV01000006.1| GENE 9 7102 - 8310 353 402 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 42 402 41 417 418 140 26 1e-32 MISAQEQVRQIKHGVADLINEQDLVKKIEKSIKENKPLVVKLGLDPTAPDIHLGHTVPLR KLRLFQEFGHQVVIVIGGFTARIGDPTGKSVTRPPLTKEEVLKNAETYKTQIFKVLDPEK TIVRDNSEWLESMNFADVLRLASSYTVARMMERDDFSKRFKEGRPIGVHEFMYPLMQGHD SVALHADVEFGGTDQTFNLLMGRHLQELEGQEPQVVITMPLLEGLDGIQKMSKSLGNYIG IDEEPKEMYGKAMSIPDELMMRYFMLVTDMSIEEQEDMTKRLESGELHPRDAKMQLARTI VRLYHGEEAALEAEEEFKRVFQQRAMPTDIPEYAMDAPTEPIFVPQFCTDAGLTASNGEA RRSIKAGAFKVNGEKYTEENLKLEDGMIIQVGKRKFVKIKFN >gi|292596542|gb|ADCV01000006.1| GENE 10 8468 - 10558 2115 696 aa, chain + ## HITS:1 COG:alr5324 KEGG:ns NR:ns ## COG: alr5324 COG0744 # Protein_GI_number: 17232816 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Nostoc sp. PCC 7120 # 22 627 15 634 643 473 42.0 1e-133 MSSNSNTRTNRRSNGNGSTPKKTNPKRLFWICTLLFILIVAGGGCGFISATLSNLPDVSN VRPSASSQIYDVHGNLITTVHSTENRLPVPLKDVPKDLQNAFVATEDSRFYTHHGIDPIG ILRAVWVNIVHSGVSEGGSTITQQLARNAFLSQDRTLKRKISEALLALKIEQHYTKDEIL EMYMNQIYFGQGAYGVQSASHVYFGKDASELTLAQAALIAGLPQSPNYYSPFNDLEASKK RQAVVLGQMVKYGYITQEQADEARQADLGLIAKQEQAHEKSNASYFINYVISQISEKYGD DAIYKDGLKIYTTLDMDAQNAAVAAMQNLPNYYTDKNGLSQPQGAIVAMNPHNGYIVAMV GGRGDDAFNRATQAERQPGSTMKPFVYLAAIQSGKTPGSIVEDSPVTFGNWSPKNYENDY EGNITYRYALQHSRNVAAVKVADEVGMTKVINLAKEMGISTLTDQDYNLSTALGGLTHGV TPLDMVQAYGVLANGGIKVQPTAILKIVDRNGQVVEENSIQEKRVIDEKDAAIITNMLES VINGGTGGNAAIGRPAAGKTGTTDDSKDAWFIGYTPDLVAAVWIGDDYGTETLHGITGGS TPAVMWGQFMANALANTPASDFPIPASAQSAISEGYVNPAKAQPKKEDKKDEKADKKDDT GKTTDEKIKSNDKPQKEEVTEQKSNSSKNKKSKKER >gi|292596542|gb|ADCV01000006.1| GENE 11 10712 - 13090 2391 792 aa, chain - ## HITS:1 COG:BH3106 KEGG:ns NR:ns ## COG: BH3106 COG1193 # Protein_GI_number: 15615668 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Bacillus halodurans # 6 792 7 785 785 462 36.0 1e-130 MFNEDVLDFHHIKEQLQQHCSSTIAKELAMNIEPMIDAKQIQENLDETAEAMRSLQTEVE QPLGGTRDIRESCKKSRKDFVLTREALWDIYLTIGAYKRMTKFFRTKYMDYPLLSLWVQD MPNTDRIENRFKRVFDEKGELLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYF QETIITQRNNRYVIPVKQEYRQYFDGLIHDRSATGQTLYIEPMRLVNLNNELQEALIGEE QEVLRIYRELSALVKQHSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILSTDRTVNLM RARHPLIPPNMVVPTNIQLGTSYRILLITGSNTGGKTVSLKTLGLLSLMNQCGLFIPADH GSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEE GSALAVSILEFFRKKGALMMVSTHYNELKNYAYHTEGIENGHVEFDERTLKPTYRLHIGV AGSSHALSIAARLGLQKDIVERATEYKSQFGSHEMEEVLSDLNEQLRKASERERALKKEL DETRRMRGQLEKEKKQFNENRKQILAKAQADAESMKRSLRVEGEAIIKQLKAQFSETNKD RLQSAINAARKGISSVHVPEAAVDDDRKSLTADAIKVGQAVYVTSLRSLGTVLSINGNRV NVDINGLTATVKVSELQSTTREEGNKLAREQKAAMPKTRKRMGGSAVQRQKEVRTEINIL GQTVDEATVSVGRFIDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFEIAGYD EGGAGATNVVLK >gi|292596542|gb|ADCV01000006.1| GENE 12 13104 - 15527 2440 807 aa, chain - ## HITS:1 COG:MA0538 KEGG:ns NR:ns ## COG: MA0538 COG0826 # Protein_GI_number: 20089427 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Methanosarcina acetivorans str.C2A # 2 806 7 854 855 398 33.0 1e-110 MELLAPAGTMENFIAALESGADAIYLGGKGFNARAHAANFGIEELTEAIRLAHILDVSVY VTVNILIGDSELSALEAYLKDLERIGVDAIIVQDLAVAKLAQRVAPKLHLHGSTQMTAAT LDAVRFYESLGFTRVVLARELSLAEIEHICKNCTAEIEVFVHGALCVCYSGQCLMSSFIG GRSGNRGACAQPCRLPYELLDSLGASLLPKHEAYLLSPKDLNYSEYMNELVAAGVTSFKV EGRMKKVSYVRQVIGTYRHILDTAHIDSTDADALASGFNRGFSTDYLTDHVGKSMMTVVA PNNQGKLIGKAEVKKGQVHLFLTEPIEKGSLLKVMQRSGSITYYQIDQNWSLVDEKHIVG KPDEGFAAGQVFLASGPKAQKQRGLQDFTAKLEVHGYLSINTEREIPYTELTFVLNDGRT VTISNEFEPVYANNKPTTLEKVRDQVGRLGNTLFTLGSMSIPDGPYMWPASVLNALRRDA VEALENLLLTDHEAAWAERAVEPRNMSSLVAKSKVQYTEPMVSARVDELDGVKAAIEGGA KKIIFGGDRLQRKPYEISIYEQVAKLCKEHNVLCVFATPRVVKDDEVDAYMNTLKAIVES KPDSISIHMPQALLWLRELGYSGAIEADTGLNIFNGSALQVWQDFNMSSIAPSLELTLAQ LVNLQKSAHLPLEVMVHGYTEMMISEYCAIASFVGTGKKENCPMPCVTEDYALKDRKGEV FPLRTDPYCRMHIMNSHEMDMRAYVPELYRKGLHILRIDGRHMDPHRLRNIVADYVSIQN GTKEAPPKSVGKDDTPITRGHYFRGIL >gi|292596542|gb|ADCV01000006.1| GENE 13 15616 - 18060 3216 814 aa, chain - ## HITS:1 COG:CAC2356_2 KEGG:ns NR:ns ## COG: CAC2356_2 COG0072 # Protein_GI_number: 15895623 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Clostridium acetobutylicum # 151 809 3 648 654 445 37.0 1e-124 MKASLQWMNEYVPVDMNRPAQELADELTQAGIPVEDVIAMDNGIKKIYTGKIVEITKHPD ADKLQVCQVECLTEEGEPVTKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKKGKLRGVV SEGMFCSVAEFGISSDLVLPEEAQGIYIFPEGTPIGLDVKDVLGLNDTVYEFELTANRAD CFSMVGLSREFGVMTNQKALFPVIMVNENGESIEGKASVSIEADDLCTRFTARVVTDVKV EPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHKLVARRAKNGEV LVTLDGSERELNDSMLIIADAERPVGVAGIMGGFDSEVTNETTTVMFEAAVFNGPSIRRT AKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPTCKVDVGVIDVYKNPVEQHTV TFTAAQINDYLGTNIEKDEMVRILTALEFVVTEDGDKLSALVPTWRGDVTVMPDIAEEIA RIYNYDNITPTIPVAVLSSGGMTPKKALIKEDTHALAKLGMTQIITFSFMHKDGLSNMML PEGDSRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANVYEPKDL PLTEVPHERPMACGILMGKANQAGWNQAERTTDFYDVKGIVDALLAELGVTSYEVNRGTE PYFHPGVSAQYVVDGKMIAQYGELHPQVSKNFDLPGKVYMFEIDLEAVLSLTIPPFRYTS FSKFPGTSRDLAIVAPVSVSSGEILSIIKEHGGEYLESASIFDVYEGEHIEAGYRSLAYN LQFRSMEGTLNDEDIDGNIQAIIDALAEINCKLR >gi|292596542|gb|ADCV01000006.1| GENE 14 18070 - 19092 1524 340 aa, chain - ## HITS:1 COG:BS_pheS KEGG:ns NR:ns ## COG: BS_pheS COG0016 # Protein_GI_number: 16079916 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Bacillus subtilis # 1 340 1 341 344 429 59.0 1e-120 MEQELQRIKAEALDAIKDAADQQALQDIRVKYLGKKGEVTALLKGLGKLSPEERPKAGAL VNAVREALEAEIDTVKARMETAELNARLEKERIDITLPGRAQKAGHIHPLTKVNEMIEDF FMKMGYTVEEGPEVEQDYYNFECLNLPKDHPARDMQDSFYITENFLLRTHTSPVQARTMQ RHEPNSPIRMIAPGKVYRWDYDATHSPVFHQVEGLIIDEHITFADLKGTLESFLRHMYGD ETKVRFRTSFFPFTEPSAEVDISCVMCGGEGCRVCSHTGWLEILGCGMVHPDVLRINGYD PEKVKGFAFGMGVERIAMLLYGINDLRLFFEDDVRFLEQF >gi|292596542|gb|ADCV01000006.1| GENE 15 19129 - 19593 587 154 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1069 NR:ns ## KEGG: Vpar_1069 # Name: not_defined # Def: thioesterase superfamily protein # Organism: V.parvula # Pathway: not_defined # 1 154 1 154 154 316 98.0 2e-85 MATTLLEYFNELRDQNPFSWVKDSEITAVEPGHAEMTLQTNETDYCNFRGDLHGAVCIGL ADSVMGTACFTLGKSVSTIDLNGNYVKAVKGGAVLRGVANVEHNGKTTMVATARIYNELG ELVHLARGTFFVLEEKPLPDLPWRFIEEDNPDLV >gi|292596542|gb|ADCV01000006.1| GENE 16 19819 - 21030 497 403 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 3 403 6 413 413 196 34 3e-49 MYKESFLMAWASLVANKLRSLLTMLGIIIGVAAVIALVSIGNGVKQDIEDSISSLGSNLL VVMPGAPRTPGVRPSQGSMKSLKISDYEAIAKLEGVKAASPMTNGSYVVIYQNKNWTTSV AGVNANFQDVNNWTMTSGRFFSDKNVQNRERVAVVGQTVVKNLFADEDPVGKEIRVKNIP FRVIGVLKSKGNGTMGNDQDDTVLIPYTTSMERVEGIDYLRMVYVVAKDDEGIDRLQADI ENLLRVRHNIKDTNLDDFNIQNMKSIMETVAQTTGTFTLFLGAVAAISLVVGGIGIMNIM LVSVTERTREIGVRKALGATYSVIVTQFLIEAVVISLMGGFIGIAFGIGASKVIGMVSGM STIVSVPTIIMSFAFSMAIGLIFGIYPARKAAKLNPIDALHYE >gi|292596542|gb|ADCV01000006.1| GENE 17 21023 - 21745 282 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 226 7 225 318 113 32 2e-24 MNQTVIDIQGITKTYVNGKLSVPVLHGIDLVVNKGEFVSIMGPSGSGKSTFMNILGCLDR PTTGSYRLNGDEVATLSDDELAYVRNKQIGFVFQSFNLLTKLTALENVALPMIYAGVNKK MRIERATQLLQSVGLGERMDHLPSELSGGQRQRVAIARALANNPAIIMADEPTGNLDSKS TVDVMNIFRGLHNEGRTILLVTHEPDIATYASRNVVLKDGIIVEDSINSNMTPIKEVPNV >gi|292596542|gb|ADCV01000006.1| GENE 18 21758 - 22840 1403 360 aa, chain - ## HITS:1 COG:AGc3332 KEGG:ns NR:ns ## COG: AGc3332 COG0845 # Protein_GI_number: 15889118 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 300 35 350 437 131 29.0 2e-30 MKEFLQKHRKRIVTGAVVLCVLGGGTYYYMDSLNANQAQTLYTTGKVEKGDVKTSISATG TINPVNYVDVSTNVAGKLEKVLVKENDQVTAGQVIAYIDTRQLQASVDDARAALAKAELD MNRYKSLAAQDAIAQQTYDDSVTSYERAKSTYERAAADLSDATITAPMSGTVVGTPLKAG QTISTGISTQMIIATIADLKNLEIYLTVDETDIGNIKQGAKVEFTVDSKPGETFTGYVSE IAKGTKGNMGTTSSSVVYYTVKVQIPENIAGNFLPTMTARATIFGEDIKNTLVVPLTAVR TDKQGEYVYVIKDGQPVRTAVSTGVTGDTNVQILKGLSEGDEIIVSGDVNAPKNNVAGPF >gi|292596542|gb|ADCV01000006.1| GENE 19 22999 - 23958 789 319 aa, chain - ## HITS:1 COG:CAC0517 KEGG:ns NR:ns ## COG: CAC0517 COG0205 # Protein_GI_number: 15893808 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Clostridium acetobutylicum # 1 318 1 318 319 298 49.0 1e-80 MRRIAILTSGGDAPGMNAAIRALTRKAIHEGFEVFGIERGYLGIIEEKIFPLSNRDVGGI ITQGGTMLKTARFPEFQNEEIQRKAYNILKAYDIDHLVVIGGDGSMRGATSLSKLGMSTM TIPCTIDNDMGGTQYTIGYDTALNTVVDAVGRIRDTSNSHERVAIVEVMGRKAGHIALKA GLACGAEIVLVPENPMPLHAVCRHLKETQIRGKEYSVILVAEGAYNSGEVKAFIKEHTEF DPSLTVLGYLQRGGGPSAFDAILAARMSEVCINLLMSGVANRLVGYIDGHIRALSYEEAE RLEFPIDEKDYRLLSILSS >gi|292596542|gb|ADCV01000006.1| GENE 20 23885 - 24727 695 280 aa, chain - ## HITS:1 COG:NMA0648 KEGG:ns NR:ns ## COG: NMA0648 COG0703 # Protein_GI_number: 15793634 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Neisseria meningitidis Z2491 # 7 157 8 158 170 82 30.0 1e-15 MIIKRNIMLIGSMGSGKSHFGRNLAERKGWQFVDTDRVLESRFGLPIAEIFKKIGEKAFR RAEMDVLKKVCLYHEAVISVGGNFPIEHRTLKVLKKYSYIIGIRAAQFRIVSRVNRRVGK RPTMDYSNVNAFVHAMIQSWKPVYKQCDFVLDTTNGRTYDFIQRIEDELDASDVQFKARR QPNDTNDVDAKEASEDIQFNNHQSRKKEISEAVSKRAMSNKIRYDKRYKQKTSNQTNKKG KAHSISKQRTPQGGNGYEKNRNTNKRRRRTWNERRHKSAN >gi|292596542|gb|ADCV01000006.1| GENE 21 24847 - 25365 284 172 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1075 NR:ns ## KEGG: Vpar_1075 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 172 1 172 172 280 89.0 1e-74 MEQLKQIKVFIHSIWTDLKESTTYQVERILTGLVLWGMLISLSMYGLIYFEDKNNSLKNQ QENYNIQMNAESDYIVSNEAKLLESFTRNKTSNTSSNTNIFDSLQGEPLMIVSTDEHEGI LELTVLGSTERMINWINTVEEKDPSRRIEIEDIERKGNVVYVHCAIKSIIKP >gi|292596542|gb|ADCV01000006.1| GENE 22 25244 - 25528 259 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294793873|ref|ZP_06759010.1| ## NR: gi|294793873|ref|ZP_06759010.1| hypothetical protein HMPREF0873_00459 [Veillonella sp. 3_1_44] # 1 94 105 198 198 193 100.0 3e-48 MVVYILDAAMSEHISLQHLSIKDGRISIDGIGTSDEMCRKFIAILQQKLLGMECHGTVKA DKGVYTFHMDGSKREHNVSGRENINGPSVVGDAH >gi|292596542|gb|ADCV01000006.1| GENE 23 25824 - 26678 557 284 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1076 NR:ns ## KEGG: Vpar_1076 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 284 1 284 284 586 97.0 1e-166 MKRKKRIHSGVCITDEHIVCVTAHIENKTMVITDALEMKRTGPIDEDVTKFIETYDLDEG AYSIVANIDTQMHVAPYDPHDFDMKEFIKWNIEDYFSFEGDSFQMDACRREYPRHNYHMF MVAVDRHSLELLKQGIRDTYAPVDVIDFWPIPICYCLMRRSGTVTGVVEEGAMHLWLWWN DICIQECIVPITSSDVAEAMDKLGVRLQDFGIDEIQGIRMYGLESITNEERTDMEGIISM YGETEYIPLLFLGRGRNRCKQGQLDWDMAIGMAARGLKWIGLGW >gi|292596542|gb|ADCV01000006.1| GENE 24 26688 - 27095 363 135 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1077 NR:ns ## KEGG: Vpar_1077 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 135 1 135 135 263 96.0 1e-69 MNVGAHNAGFITYIAILTMSFLLLLAFMGLRIGQICESNVVDELHLEEAHYAAQKGVHWF VGYCKLGNVWDFQNKLVVIDDENVEITIEADQSTDNPRHIMSYGKLKNSEIVSRVHMYVT VDKEKHMHVIKVKPY >gi|292596542|gb|ADCV01000006.1| GENE 25 27076 - 27630 446 184 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1078 NR:ns ## KEGG: Vpar_1078 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 184 40 223 223 331 93.0 9e-90 MGFILYSTLISMMISIIVLTLLLGIVFYAVMWDAKLLDSVAMMEDGRYTRRMVVAHMIWN PVKVTVEDRNTSLYIHDTKRTTLTVQRHALYRKLTDGSLQPVSGSRIVGTTDKRNVGYTQ EYPFSVDTNGTVYLRWYINNRFVNDRKYTSGYGGLSIYEVSIGQSAIYDWYTSKEETGYE RRSP >gi|292596542|gb|ADCV01000006.1| GENE 26 27729 - 28049 185 106 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1079 NR:ns ## KEGG: Vpar_1079 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 106 13 118 118 181 96.0 1e-44 MFILPIILSIFWMATLTVYKAYYWDHILQDTITYLEVAKASYYKNGTIEAGVYNSQFTMS PSEKITYKTHIKPVVIEGVSLQRLTVDAIDNQSVVYSLSVDLEGIH >gi|292596542|gb|ADCV01000006.1| GENE 27 28093 - 28554 408 153 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1080 NR:ns ## KEGG: Vpar_1080 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 153 1 153 153 241 94.0 4e-63 MVKVQLINRQSGSLLAEWIITIGLILLLISIALPIVTTPSRYTLNGATQEVAYMLKKVQL WSMLGHKSNGKGRMLFILNKDSYTLEEDVNHHTVNISLPQNIENERSMTIISFSALGLPY DGTEIILKDRESGEKNRIWISVQTGRIRWEEVH >gi|292596542|gb|ADCV01000006.1| GENE 28 28533 - 29075 276 180 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1081 NR:ns ## KEGG: Vpar_1081 # Name: not_defined # Def: peptidase A24A prepilin type IV # Organism: V.parvula # Pathway: not_defined # 1 180 1 180 180 292 93.0 4e-78 MKGTNYVIGLFVYIASILLPIIVSSKAISYTHIALYAVFSLIIIAGATIDMHYYILPDEG ALALVIGGMIYSYINDQSMLVTLLSVISVGTITYGLRLISRKGFGIGDIKWFSAIAIWLT PWEIICFFYVTFCVGSLYLLLTGYRNRYIPFGPFLCFGGWCALHGGSYMEVLYQWLRCNL >gi|292596542|gb|ADCV01000006.1| GENE 29 29129 - 29575 680 148 aa, chain - ## HITS:1 COG:mll6827 KEGG:ns NR:ns ## COG: mll6827 COG2165 # Protein_GI_number: 13475692 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Mesorhizobium loti # 24 107 9 91 156 61 41.0 7e-10 MKSVMHMIHGVNHRLEMCGQWVVDRLHISRVREGFKKSRKGGFTLVELMVVVAVIAILAA IAMPQFLSAADKARNAKETADIQIIKNATQLYMIDKNVDTPPTVENLYKEGYLTEHVKTA KGKEYTITYEVVSGGTSKSVVVKAPNEP >gi|292596542|gb|ADCV01000006.1| GENE 30 29612 - 30787 665 391 aa, chain - ## HITS:1 COG:DR1863 KEGG:ns NR:ns ## COG: DR1863 COG1459 # Protein_GI_number: 15806863 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Deinococcus radiodurans # 1 388 1 404 406 137 27.0 4e-32 MEAYEYVVKNNQNETEKGLMWGDSEQEIAIRLKRDGYRIYRISLQDERKKHKWNHTMVVD VTYQLGLLIESGVPLRRALQLLCQGKRGLLYTALYESIERGQTLSQALRSEGCPPIALAL LESGEAAGTLGESLQYISRHYDWERQLKQKVMSAISYPLFLLLMMNIFFLVTILFIIPSF EQVFTTMHITLPLMTRALFALGQGLKSHPLMVIAIHCVVIGSLAFAYKQHSIKCKVHRWL WLLAHRYQWSTCVYYTSILKVWALLLDSGISIIQTMNITRPLWGNIYGVECSKQVEARLL SGHSLEESLRSGQIGNAFIWQMVSIGEESGELVKMLNHCGYYYESILSKYIARLERLLEP ILLTIMGIGVAVLVVSVMYPLFTSIANLGGQ >gi|292596542|gb|ADCV01000006.1| GENE 31 30796 - 31815 640 339 aa, chain - ## HITS:1 COG:all2443 KEGG:ns NR:ns ## COG: all2443 COG2805 # Protein_GI_number: 17229935 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Nostoc sp. PCC 7120 # 10 319 5 329 372 209 39.0 7e-54 MDSCCKSESLETIVENAIQLSSTDIHLQCGQPIYLRHGDGLRATSFMCTTELIEDILRRC GIASYEWQSLDEACSCCGVRIRVHLYRANQTICGTLRLLCHQQLKLDDNSEGQLLQKLCE AHDGLLLVCGPTGSGKSFTLACCIDYINQTMERHIITLEDPIEFEFVSKKSLIHQRQLGA DINTMSDGIRDALREDPDVIMVGELRDRETLEAALHAAETGHLVMATMHTQRAVMAVHRM ISLFPGEQQEEIRNQISQVLRAVICQRLLRWNKKFITIRDILLNTHAVANLIRTRKEPQI ISIQETQLPMKTLEMAVRDVKAQYGAQQQLHTLLDQQLS >gi|292596542|gb|ADCV01000006.1| GENE 32 31799 - 32809 865 336 aa, chain - ## HITS:1 COG:CC0174 KEGG:ns NR:ns ## COG: CC0174 COG2804 # Protein_GI_number: 16124429 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Caulobacter vibrioides # 7 331 113 480 491 275 41.0 7e-74 MYVDVTLDDIILYALEHHVSDIHFDPVESGAHVRLRQDGLLQHYMTVSFEEAELIINRIK VCSSLDISEKRLPQDGRWSWSHKNKSVTMRVSTLPSLYGETLVCRLMGNEGSHKDLKELG MQPDIFEHIEQLLKRPYGLLLICGPTGSGKTATLYAMLRMLNLDETKLICLEDPVEAEIK GAIQIGINEKIGFTFAKGLRSVLRQDPDTIMIGEIRDKETAELAVKSALTGHRVLSTIHT NTAIGVVTRLMDMGVEPYLIRATLMGAIAQRLVRKFDGTSYQGRTALFEYLEIPANSAHW DELETHLLLSLEESARKAVSQHVTSIEEVHRCGLML >gi|292596542|gb|ADCV01000006.1| GENE 33 32998 - 34281 1882 427 aa, chain - ## HITS:1 COG:CAC0713 KEGG:ns NR:ns ## COG: CAC0713 COG0148 # Protein_GI_number: 15894001 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Clostridium acetobutylicum # 4 427 7 430 431 607 72.0 1e-173 MAVIEQVIAREILDSRGNPTVEVEVCLEDGTIATAAVPSGASTGMFEAVELRDGDKSRYS GKGVLKAIDNVNAKIGPALIGYDATEQVAIDNLMLQLDGTDNKSNLGANAILGVSMAVAR AAAESLDLPLFVYLGGFNAKELPVPMMNILNGGAHADNNVDIQEFMIMPVGAKSFAEALR SCAEVYHTLKSVLHNKGLSTAVGDEGGFAPNLSSNEEALEVICEAIKAAGYEPGKDFKLA LDSASSEFYEDGKYDLAGEGKVKTAAEMVDFYEYLVGKYPIVSIEDGLAEEDWEGWKLLT DRLGDRVQLVGDDLFVTNTKRLARGIELGVGNSILVKVNQIGTLTEAFDAMELAKRAGYT CVVSHRSGETEDTFIADIAVAVNAGQIKTGAPARSERVAKYNQLLRIEEMLYETAQYKGN DVFYNLK >gi|292596542|gb|ADCV01000006.1| GENE 34 34399 - 35925 1466 508 aa, chain - ## HITS:1 COG:CAC0712 KEGG:ns NR:ns ## COG: CAC0712 COG0696 # Protein_GI_number: 15894000 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Clostridium acetobutylicum # 1 504 1 508 510 546 55.0 1e-155 MAKLEAPVMLVILDGFGLGDKSDTTNAVVQAKPLCFNRLWDTYPHTTLEASGLAVGLPEG QMGNSEVGHLNLGSGRIVYQDLTRITKDVESGEFYNHPVMKELYEVAKKQSLHLIGLVSD GNVHCSLDHIKAVIKGAHDNGIEHVYVHALLDGRDVAPQCAQGYLKDLETYMADLNCGKI ATVSGRYYAMDRDNRWDRVELAYNAIVHGQGEIATSACEAVQQSYDKDAADEFVLPTVID AAGTIKDGDAVIFCNFRPDRGRELTKALVLPDFDGFKRKPLSIYMATMTKYEDGLPVHIV YEKDTLSETLGEVLSAGGYRQLRIAETEKYAHVTYFFNGGEEEPFEGEDRILVKSPQVAT YDLQPEMSAYEVTDKVVQAIQDETYDMIILNFANPDMVGHTGSFEAAVKAVQAVDTCLGR IVEAIRSKKGHLLVTADHGNAELMVNHETGKVHTAHTTNLVPLILMSDSLKTATLEAGKL CDIAPTLLDLAGIQQPKAMTGHSLVHKA >gi|292596542|gb|ADCV01000006.1| GENE 35 35939 - 36709 833 256 aa, chain - ## HITS:1 COG:BS_tpi KEGG:ns NR:ns ## COG: BS_tpi COG0149 # Protein_GI_number: 16080445 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Bacillus subtilis # 1 249 1 248 253 251 51.0 1e-66 MRKPIIAGNWKMNGTIASGSILIEAFNSVLQDMELSCDVVVCPPFTAIERAVVLTKNTAI EVGAQTMDYHDAGAFTGEISPLMLTEVGVNYVIIGHSERREYYGETDETVNAKIKSAFHH NLNPIVCVGESLEHRETGHTLDWITSQLKGALADIPKEQVSQLIIAYEPIWAIGTGKTAT ADQAEEVCKEIRNYIRSLYDNETADAVRIQYGGSVKSENALEILGEPNIDGALVGGASLV VDEFIDIIKAANQVSA >gi|292596542|gb|ADCV01000006.1| GENE 36 36711 - 37889 1629 392 aa, chain - ## HITS:1 COG:BH3559 KEGG:ns NR:ns ## COG: BH3559 COG0126 # Protein_GI_number: 15616121 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Bacillus halodurans # 2 391 3 393 394 429 58.0 1e-120 MKQTIEGLQVANKTVFVRVDFNVPMKDGVITDDTRIRSALPTINYLIEKGAKVILASHFG RPKGERKPEMSLAPCAKHLSDLINKPVAFVDDCIGPKVEEAVKALQSGDVLMLENLRYHN EETKNDPEFAKQLASLADVAINDAFGVSHRNAASVVGIADYIPMAAGFLLKKEIDALSAA IVHPKTPMAAIIGGAKVTDKISVISNLLPKVDVMIIGGGMANAFIKAQGCNIGSSLFEEG QEVIATDLVMEARVAGAKLLTPIDAVVADAFSNDANTKIVDVDQIEDGWMILDIGPKTRE LYVEALAPMKTIIWNGPMGVFEMENFAAGTNAVAKAVAESDAMTIVGGGDSVAAIEKSGL ADKISHISTGGGASLEFLEGKILPGIAALSEA >gi|292596542|gb|ADCV01000006.1| GENE 37 37903 - 38913 1355 336 aa, chain - ## HITS:1 COG:BH3560 KEGG:ns NR:ns ## COG: BH3560 COG0057 # Protein_GI_number: 15616122 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Bacillus halodurans # 1 336 1 335 335 414 62.0 1e-115 MAVKVGINGFGRIGKCVVRAAINNPDVDVVAINATGDNEGTALLLKYDSVHGTIPNEVTF DEENIYVDGKKIRVFHDRDASKLPWSEEGVEIVMECTGKYRDAEEAKVHLNQPTVKKVLI SAPGKNEDLTMVMGVNQDMYDPAKHHIISNASCTTNCLAPFAKVLYDEFGIKRGMMTTIH SYTNDQKILDARHKDPRRARAAAMSIIPTTTGAAKAVAKVLPQLKGKLDGFALRVPTPDV SATDLVCELEKPATKEEINEAFRKAAAGELKGILGVSDVPLVSCDFSSDSRSSIVDADLT MVMDGNMVKVVSWYDNEWGYSERLIDMAAFVASKGL >gi|292596542|gb|ADCV01000006.1| GENE 38 38981 - 40006 801 341 aa, chain - ## HITS:1 COG:CAC0708 KEGG:ns NR:ns ## COG: CAC0708 COG2390 # Protein_GI_number: 15893996 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Clostridium acetobutylicum # 1 337 1 341 344 228 35.0 1e-59 MNEFLMICERIVPEIVSVLKERYKILNHLVYEEPIGRRTLATATDLPERTVRSHIELMRA NGLVDIYKPGIFLTDEGHAIVPKLRNFLNELDRINELEHRLTEALHIDRVVITPTEGTLM VKKLGFTAAKLLQDLLKPNAVVAISGGSTMAAIAEEMPILPFNPTVVPARGGVGEVVEYQ ANVIASVLAERLSGSYKMLHLPDGLSQDSLHMLMTCEPQIKEIGDLISRTDVLLFGIGTA MRMADQRHIADDVRKQLVDNHAVGEALGQYCDIEGKLIYSTNNIGLSLPDVVKVPNVIAV AGGQEKASAIIGVMRACQKGILIIDEQAAEGMRQLLQISAL >gi|292596542|gb|ADCV01000006.1| GENE 39 40246 - 40872 921 208 aa, chain - ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 2 208 3 209 209 302 70.0 3e-82 MKVNVMTHPLIQHKVTLMRDVQTGSKDFRELLDEITMLMGYEITRNLPLEDVEVETPLTK MTGKRIAGKKLGIIPILRAGLGMVNGMLSLIPTAKVGHIGLYRDPETLKPVEYYCKLPSD VGERDFIVTDPMLATGGSAAAAITLLKEKGAKHIKLMCLVAAPEGVEAVNKEHPDVPIYV AALDEKLNDHGYILPGLGDAGDRIFGTK >gi|292596542|gb|ADCV01000006.1| GENE 40 41057 - 42289 1954 410 aa, chain - ## HITS:1 COG:SA1915 KEGG:ns NR:ns ## COG: SA1915 COG0112 # Protein_GI_number: 15927687 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Staphylococcus aureus N315 # 1 410 1 411 412 579 70.0 1e-165 MSFLEKQDPNIQAVINQELARQRDKLEMIASENFVSQAVMEAQGSVLTNKYAEGYPGKRY YGGCENVDVIETLAIERAKRLFGAEHANVQPHSGSQANFGVYFALLQPGDTIVGMNLSHG GHLTHGSPVNVSGTYFNVVPYGVDAETQQIDYDEFRKIVLEAKPKLIIAGGSAYSRQIDF KKMAEVAHEVDAIFMVDMAHFAGLVAAGLHPNPVEYADIVTTTTHKTLRGPRGGMILCKE KYAKAIDKAIFPGIQGGPLMHVIAAKAVAFGEALQPEFKVYAQQVIDNAKALAAALQEKG LTIVSGGTDTHVMLVDVRNTGLTGKEAEHLLDEVGITCNKNTIPFDPASPFVTSGIRLGT PALTTRGLQVKDMEEIADIIAVVLKNPEDKSVHEEASKRVAALCEAYPLY >gi|292596542|gb|ADCV01000006.1| GENE 41 42336 - 42773 632 145 aa, chain - ## HITS:1 COG:BH3767 KEGG:ns NR:ns ## COG: BH3767 COG0698 # Protein_GI_number: 15616329 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Bacillus halodurans # 1 144 1 144 145 184 63.0 7e-47 MKVAIGCDHGGLNLKESVKEVLSALGHEVEDFGCYSAESCDYPDIAVPVANAVVSGQADR GILICGTGIGIGIAANKIAGIRAALCHDTFSAHACREHNDANILTMGERVIGPGLANDIV TIFMETEFEGGRHARRVEKIKALEK >gi|292596542|gb|ADCV01000006.1| GENE 42 42785 - 43231 582 148 aa, chain - ## HITS:1 COG:BS_ywlE KEGG:ns NR:ns ## COG: BS_ywlE COG0394 # Protein_GI_number: 16080746 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Bacillus subtilis # 1 137 1 138 150 109 41.0 2e-24 MNILFVCTGNTCRSPMAEGITRALAAEQHKDVTTVSAGLFAAYGAKPTEQAVVAVQSIAD ISDHESRPLTMELVNAADLIIGMTKDHKSVLLRQFPFEEGKIKTISEWGGLDGDVTDPYG SDQTVYNQCAEQIYHLVEAGLTSVPQKA >gi|292596542|gb|ADCV01000006.1| GENE 43 43344 - 44375 927 343 aa, chain - ## HITS:1 COG:BS_ywlC KEGG:ns NR:ns ## COG: BS_ywlC COG0009 # Protein_GI_number: 16080748 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Bacillus subtilis # 10 341 17 345 346 279 45.0 7e-75 MDTKIITNPSEQDIDTLARALRNGELVSIPTETVYGLGANGLDPEAMDKIYAAKGRPSDN PLILHVPNSESIKPLVTEISATAQALMDAFWPGPLTITLPKSDLVPDRATGGLPRVALRC PDHKVCRALLERAGVPVAAPSANISGRPSPTTAQDVYHDMKGRISYILDAGPCTIGVEST VVEVHDDKVIILRPGGITKAQLEGVVSTVEYDTALVNATTKPKAPGMKYTHYAPDAPMTV VVGNPEDIASMFKALSEGIEGPIGCLVSHETYNLIKEDGRFMCHCFGHHGDALALGHDFY KSLLHFNENHVTLILAEGVDDDGFGVAIMNRMEKASSHHIIYK >gi|292596542|gb|ADCV01000006.1| GENE 44 44377 - 45246 444 289 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223485211|ref|YP_002587537.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3] # 24 284 33 291 304 175 38 4e-43 MHKEIWTIGRILQWTEQYFQSKEMDTPRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELD AFRPLVQQRAKGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLGTYPKDSNVR ILDVCTGPGTILLSLLHYLPNACGVGLEISTDALLVAEENGERFNLNDRVQFLESDMFSA LAGNAEKFDLIVSNPPYIRTGDAKLLSQDVLNEPHIALFGGEDGLEFYRILAKECRNYLN ANGRVVFEVGFDQAEEVGALLQETGQYSNIQFIADLGGHNRVVTAVYEG >gi|292596542|gb|ADCV01000006.1| GENE 45 45239 - 46321 1479 360 aa, chain - ## HITS:1 COG:CAC2884 KEGG:ns NR:ns ## COG: CAC2884 COG0216 # Protein_GI_number: 15896138 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Clostridium acetobutylicum # 2 355 1 353 359 406 57.0 1e-113 MLVDKLQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGID EAMEVIEDKSMDEEFREMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGA GGDEAALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFES GVHRVQRVPATETQGRVHTSTVTVAVLPEMEDVDIEVNEKDLKIDTYRASGAGGQHINKT ESAVRITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQDQAEQEAISSMAADRKSQVGT GDRSERIRTYNYPQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQAAKMQEANTNA >gi|292596542|gb|ADCV01000006.1| GENE 46 46324 - 47214 877 296 aa, chain - ## HITS:1 COG:FN1092 KEGG:ns NR:ns ## COG: FN1092 COG3872 # Protein_GI_number: 19704427 # Func_class: R General function prediction only # Function: Predicted metal-dependent enzyme # Organism: Fusobacterium nucleatum # 1 283 1 289 304 249 46.0 5e-66 MNRERIKKFVGGQAVIEGVMMRGPGYTATAVREPAGTIVVQKEATKSIADTYPILKKPFL RGCVALYESLVIGMKALSFSAKAAGDEEEEMSNSEIAITMVISTLFAIAVFLALPTFIVK FIPGVQDNHIVLNLIEGVIRLVLFLLYIWGIGLTKDIQRVFQYHGAEHKTIHTYELDLPL TVENVRQQSRLHARCGTNFLLIVMVVSIFVFAFLGWPNLLERIVSRVLLMPVVAGIAYEV IRLAGRSDHSFVKALIKPGLALQYMTTREPEDDQIEVAIRALEEVRPPESDAYEEE >gi|292596542|gb|ADCV01000006.1| GENE 47 47287 - 47484 358 65 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227371063|ref|ZP_03854547.1| LSU ribosomal protein L31P [Veillonella parvula DSM 2008] # 1 65 1 65 65 142 100 4e-33 MKQGIHPDYKEATVTCGCGNTFKTGSVKEDLRVDVCSKCHPFFTGQQRAAQARGRIEQFN KRYGK >gi|292596542|gb|ADCV01000006.1| GENE 48 47564 - 47833 429 89 aa, chain - ## HITS:1 COG:CAC0545 KEGG:ns NR:ns ## COG: CAC0545 COG4443 # Protein_GI_number: 15893835 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 73 3 74 74 66 52.0 1e-11 MAVINFEIFKVIGTLSEDKDGWKKQLTCTSWGKYNPKFDLRAWDSEYTSMKKGITLSLEE LIALRDILNESDLEAILAEAIEEKQASKE >gi|292596542|gb|ADCV01000006.1| GENE 49 47938 - 49383 1832 481 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1102 NR:ns ## KEGG: Vpar_1102 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 481 1 481 481 968 99.0 0 MKVNNEEFIALCANHGIEGIDIVNELMRFKVLDQLISSNASSREWGVTADDLYALAEKST VESFGPVPYDLNTFQALYGPSFRVELFDFISDTGILEGLDVGTIWEIPVRESIEAHSKTG ELVLYAYVEEYAGMVEEILQSYEDKKVVLYTASPVCYSILTRLYPMAQIINQWPHRSYFD HIFTGTVGMFQSSEDIVEEVANGLHNLVPEGTAQLFLPATMAQNQLGLNNMALQFFLNQK RVEVIREWTPLGAYEIVYGKYDVKKMRVGLRERVGDEWKTINYIPLPHGVFAQLPVFTVL NYGLSLRSILLPGSQTDVALGQDGIYCIDSRVSELGRTALIESGAYFLTFKRHTDHIDVD ITTEAPVDDMYWMFPDAELAYMWYAYFCSTTGQTLIQEISMLVQTDESFGYMLSSVRRRV LDVKDETQLIESVQAADEAYIKAVTEATTSWKETVDSLGAQVMPPTASIDIEDYSDYKKE L >gi|292596542|gb|ADCV01000006.1| GENE 50 49385 - 50020 710 211 aa, chain - ## HITS:1 COG:CAC0689 KEGG:ns NR:ns ## COG: CAC0689 COG0177 # Protein_GI_number: 15893977 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Clostridium acetobutylicum # 12 205 10 203 211 220 54.0 2e-57 MRVTKAIKAAQLKLLQEHYFDAKPALEYTNEFELLVAVVLSAQCTDERVNIVTKRLFPEL NHPAKMLEIGVAKLETLIKDCGLYKSKAKNLIATCQILVDRYHGEVPREFDQLVELPGVG RKTANVVVSVLFGTPAIAVDTHVFRVSNRLKLGIAKTPEEMEQKLQKAIPKKDWAAAHHW LIYHGRRLCKARKPLCNECFLNHLCPSAGKV >gi|292596542|gb|ADCV01000006.1| GENE 51 50144 - 50413 482 89 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1104 NR:ns ## KEGG: Vpar_1104 # Name: not_defined # Def: protein of unknown function DUF896 # Organism: V.parvula # Pathway: not_defined # 1 89 1 89 89 133 92.0 2e-30 MSNINDTLKRINELAAKKKSGQELTPEELAEKKELYEIYLSFIRGQITSTLDRVEFIDPE TGERTAPKRALENLAKEVDQDIKEHKDIH Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:52:27 2011 Seq name: gi|292596541|gb|ADCV01000007.1| Veillonella sp. 3_1_44 cont1.7, whole genome shotgun sequence Length of sequence - 312059 bp Number of predicted genes - 286, with homology - 275 Number of transcription units - 131, operones - 71 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 43 - 1290 1482 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 1469 - 1528 9.2 - Term 1492 - 1534 5.3 2 2 Op 1 . - CDS 1539 - 2108 704 ## Vpar_1106 hypothetical protein 3 2 Op 2 . - CDS 2189 - 3229 1645 ## COG0206 Cell division GTPase - Prom 3295 - 3354 8.1 4 3 Op 1 5/0.000 - CDS 3368 - 3712 459 ## COG3856 Uncharacterized conserved protein (small basic protein) 5 3 Op 2 . - CDS 3709 - 4344 727 ## COG3879 Uncharacterized protein conserved in bacteria 6 3 Op 3 . - CDS 4405 - 5286 691 ## Vpar_1110 polypeptide-transport-associated domain protein FtsQ-type 7 3 Op 4 11/0.000 - CDS 5315 - 6247 1097 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 8 3 Op 5 26/0.000 - CDS 6244 - 7626 1479 ## COG0773 UDP-N-acetylmuramate-alanine ligase 9 3 Op 6 4/0.077 - CDS 7641 - 8750 1177 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 10 3 Op 7 28/0.000 - CDS 8750 - 10120 1450 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase - Prom 10140 - 10199 4.5 - Term 10135 - 10178 2.1 11 3 Op 8 28/0.000 - CDS 10204 - 11190 1139 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase - Term 11203 - 11246 4.0 12 3 Op 9 26/0.000 - CDS 11247 - 12605 1756 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 13 3 Op 10 . - CDS 12607 - 14091 2095 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Term 14103 - 14144 6.0 14 4 Op 1 . - CDS 14147 - 14551 518 ## Vpar_1118 cell division protein FtsL 15 4 Op 2 29/0.000 - CDS 14573 - 15505 947 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 16 4 Op 3 . - CDS 15515 - 15946 496 ## COG2001 Uncharacterized protein conserved in bacteria - Term 16263 - 16324 17.4 17 5 Op 1 . - CDS 16350 - 16670 483 ## COG0526 Thiol-disulfide isomerase and thioredoxins 18 5 Op 2 . - CDS 16680 - 17054 489 ## COG1832 Predicted CoA-binding protein - Prom 17110 - 17169 6.5 19 6 Op 1 . - CDS 17187 - 18161 635 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Term 18171 - 18227 11.1 20 6 Op 2 . - CDS 18242 - 21151 3149 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like - Prom 21199 - 21258 8.9 - Term 21248 - 21285 4.5 21 7 Op 1 . - CDS 21292 - 21609 388 ## Vpar_1125 hypothetical protein 22 7 Op 2 . - CDS 21617 - 22846 1819 ## COG0527 Aspartokinases - Prom 22886 - 22945 6.8 - Term 23107 - 23151 10.1 23 8 Tu 1 . - CDS 23166 - 23555 584 ## COG2033 Desulfoferrodoxin - Prom 23622 - 23681 6.5 24 9 Op 1 5/0.000 - CDS 23695 - 24237 644 ## COG2109 ATP:corrinoid adenosyltransferase - Prom 24262 - 24321 2.4 25 9 Op 2 . - CDS 24323 - 25702 1531 ## COG1797 Cobyrinic acid a,c-diamide synthase 26 9 Op 3 2/0.077 - CDS 25732 - 26439 1080 ## COG2243 Precorrin-2 methylase - Prom 26464 - 26523 2.9 27 9 Op 4 . - CDS 26527 - 27381 1020 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase - Prom 27485 - 27544 6.2 - Term 27483 - 27537 14.4 28 10 Tu 1 . - CDS 27591 - 28472 1018 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase - Prom 28704 - 28763 8.8 + Prom 28639 - 28698 8.4 29 11 Op 1 . + CDS 28934 - 29923 1262 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 30 11 Op 2 . + CDS 29975 - 30916 1143 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 30932 - 30981 10.3 - Term 30924 - 30965 10.2 31 12 Op 1 35/0.000 - CDS 30984 - 31766 207 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 32 12 Op 2 . - CDS 31766 - 32761 1076 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component - Prom 32781 - 32840 8.2 - Term 32861 - 32906 -0.7 33 13 Op 1 . - CDS 32914 - 33579 1250 ## COG2082 Precorrin isomerase 34 13 Op 2 4/0.077 - CDS 33566 - 34354 950 ## COG2099 Precorrin-6x reductase 35 13 Op 3 6/0.000 - CDS 34351 - 35175 1175 ## COG1010 Precorrin-3B methylase 36 13 Op 4 12/0.000 - CDS 35070 - 36215 1007 ## COG2073 Cobalamin biosynthesis protein CbiG 37 13 Op 5 5/0.000 - CDS 36220 - 36981 1028 ## COG2875 Precorrin-4 methylase 38 13 Op 6 2/0.077 - CDS 36983 - 37570 699 ## COG2242 Precorrin-6B methylase 2 39 13 Op 7 6/0.000 - CDS 37567 - 38193 603 ## COG2241 Precorrin-6B methylase 1 40 13 Op 8 . - CDS 38169 - 39287 1105 ## COG1903 Cobalamin biosynthesis protein CbiD 41 13 Op 9 . - CDS 39358 - 39852 714 ## COG1666 Uncharacterized protein conserved in bacteria - Prom 40007 - 40066 9.4 - Term 40090 - 40152 14.1 42 14 Tu 1 . - CDS 40260 - 41855 1872 ## Vpar_1148 KWG repeat protein - Prom 42051 - 42110 8.1 + Prom 41994 - 42053 8.7 43 15 Tu 1 . + CDS 42082 - 43047 268 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Prom 43122 - 43181 8.6 44 16 Op 1 . + CDS 43296 - 44225 1335 ## COG0191 Fructose/tagatose bisphosphate aldolase 45 16 Op 2 . + CDS 44229 - 45785 1573 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 45808 - 45861 11.1 - Term 45796 - 45847 15.3 46 17 Tu 1 . - CDS 45882 - 46925 630 ## COG0679 Predicted permeases - Prom 47052 - 47111 9.3 + Prom 47052 - 47111 8.2 47 18 Op 1 1/0.154 + CDS 47147 - 47887 859 ## COG2071 Predicted glutamine amidotransferases 48 18 Op 2 . + CDS 47903 - 49210 1655 ## COG0531 Amino acid transporters - Term 49194 - 49246 2.1 49 19 Tu 1 . - CDS 49361 - 50200 1110 ## Vpar_1155 hypothetical protein - Prom 50242 - 50301 7.0 + Prom 50246 - 50305 8.5 50 20 Tu 1 . + CDS 50340 - 50999 741 ## COG0546 Predicted phosphatases + Term 51162 - 51218 5.5 51 21 Tu 1 . + CDS 51445 - 52056 951 ## COG1584 Predicted membrane protein - Term 52139 - 52188 12.2 52 22 Tu 1 . - CDS 52211 - 54478 2416 ## COG5295 Autotransporter adhesin 53 23 Tu 1 . + CDS 55119 - 55703 775 ## COG1584 Predicted membrane protein + Term 55734 - 55794 17.1 - Term 55726 - 55777 7.1 54 24 Tu 1 . - CDS 55874 - 56470 522 ## Vpar_1158 hypothetical protein - Prom 56501 - 56560 8.5 + Prom 57013 - 57072 4.1 55 25 Tu 1 . + CDS 57099 - 58310 1271 ## COG0477 Permeases of the major facilitator superfamily + Term 58403 - 58444 2.2 + Prom 58509 - 58568 6.1 56 26 Tu 1 . + CDS 58625 - 58702 72 ## + Term 58853 - 58905 14.3 - Term 58845 - 58888 11.9 57 27 Op 1 2/0.077 - CDS 58951 - 59541 480 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits 58 27 Op 2 . - CDS 59643 - 62288 1892 ## COG1112 Superfamily I DNA and RNA helicases and helicase subunits - Prom 62315 - 62374 6.8 - Term 62351 - 62394 2.4 59 28 Tu 1 . - CDS 62451 - 62870 254 ## gi|294793949|ref|ZP_06759086.1| conserved hypothetical protein - Prom 62978 - 63037 6.2 + Prom 63149 - 63208 4.3 60 29 Tu 1 . + CDS 63239 - 63442 65 ## lwe0481 type I restriction endonuclease S subunit - Term 63371 - 63407 1.8 61 30 Op 1 . - CDS 63466 - 64425 421 ## COG0582 Integrase 62 30 Op 2 . - CDS 64386 - 64778 261 ## Lm4b_00547b specificity determinant HsdS - Prom 64908 - 64967 4.7 - Term 64932 - 64977 8.2 63 31 Op 1 11/0.000 - CDS 65060 - 68194 2111 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 64 31 Op 2 27/0.000 - CDS 68213 - 69451 601 ## COG0732 Restriction endonuclease S subunits 65 31 Op 3 . - CDS 69441 - 71036 1461 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 71074 - 71133 9.6 - Term 71083 - 71143 2.1 66 32 Tu 1 . - CDS 71219 - 72436 851 ## Vpar_1162 hypothetical protein - Prom 72509 - 72568 10.5 + Prom 72471 - 72530 8.7 67 33 Tu 1 . + CDS 72553 - 72789 229 ## Vpar_1163 hypothetical protein + Term 72801 - 72857 15.8 - Term 72787 - 72847 11.7 68 34 Op 1 . - CDS 72912 - 73553 589 ## Acfer_0381 hypothetical protein - Prom 73684 - 73743 8.1 - Term 73659 - 73718 1.1 69 34 Op 2 . - CDS 73821 - 74375 445 ## Vpar_1166 hypothetical protein - Prom 74425 - 74484 7.6 - Term 74462 - 74497 4.2 70 35 Op 1 . - CDS 74517 - 74867 568 ## PROTEIN SUPPORTED gi|227372290|ref|ZP_03855772.1| LSU ribosomal protein L20P 71 35 Op 2 . - CDS 74914 - 75111 323 ## PROTEIN SUPPORTED gi|227372289|ref|ZP_03855771.1| LSU ribosomal protein L35P 72 35 Op 3 . - CDS 75130 - 75654 424 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 + Prom 75945 - 76004 9.0 73 36 Tu 1 . + CDS 76082 - 77575 1972 ## COG0471 Di- and tricarboxylate transporters + Term 77592 - 77642 12.3 - Term 77671 - 77713 1.1 74 37 Tu 1 . - CDS 77735 - 78322 444 ## CPE0789 transcriptional regulator - Prom 78435 - 78494 8.2 - Term 79005 - 79050 0.1 75 38 Tu 1 . - CDS 79086 - 80291 1672 ## COG0477 Permeases of the major facilitator superfamily - Prom 80368 - 80427 7.9 76 39 Tu 1 . - CDS 80450 - 82360 2757 ## COG0441 Threonyl-tRNA synthetase - Prom 82425 - 82484 3.7 77 40 Op 1 . - CDS 82815 - 82949 149 ## 78 40 Op 2 . - CDS 82971 - 83960 1291 ## Vpar_1173 hypothetical protein 79 40 Op 3 . - CDS 83957 - 84025 57 ## 80 40 Op 4 . - CDS 84062 - 84337 314 ## Vpar_1174 hypothetical protein 81 40 Op 5 4/0.077 - CDS 84341 - 85585 1349 ## COG0826 Collagenase and related proteases 82 40 Op 6 4/0.077 - CDS 85585 - 86193 463 ## COG4122 Predicted O-methyltransferase 83 40 Op 7 . - CDS 86217 - 87650 1696 ## COG1559 Predicted periplasmic solute-binding protein - Prom 87761 - 87820 9.6 - Term 87831 - 87871 7.0 84 41 Op 1 . - CDS 87890 - 88186 496 ## Vpar_1178 hypothetical protein 85 41 Op 2 6/0.000 - CDS 88212 - 88622 551 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 86 41 Op 3 4/0.077 - CDS 88631 - 88891 456 ## COG4472 Uncharacterized protein conserved in bacteria - Prom 88984 - 89043 9.8 87 42 Tu 1 . - CDS 89046 - 91661 3514 ## COG0013 Alanyl-tRNA synthetase - Prom 91852 - 91911 8.1 - Term 91863 - 91918 9.1 88 43 Op 1 1/0.154 - CDS 91939 - 92751 196 ## PROTEIN SUPPORTED gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 - Prom 92774 - 92833 4.0 89 43 Op 2 . - CDS 92836 - 93846 638 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 94068 - 94127 11.1 - Term 94186 - 94219 4.1 90 44 Op 1 . - CDS 94224 - 94601 497 ## Vpar_1184 hypothetical protein 91 44 Op 2 7/0.000 - CDS 94652 - 95248 563 ## COG0680 Ni,Fe-hydrogenase maturation factor 92 44 Op 3 8/0.000 - CDS 95241 - 96050 853 ## COG1969 Ni,Fe-hydrogenase I cytochrome b subunit 93 44 Op 4 11/0.000 - CDS 96065 - 97966 2540 ## COG0374 Ni,Fe-hydrogenase I large subunit 94 44 Op 5 . - CDS 97966 - 99105 1242 ## COG1740 Ni,Fe-hydrogenase I small subunit - Prom 99251 - 99310 8.2 + Prom 99092 - 99151 5.5 95 45 Tu 1 . + CDS 99172 - 99357 118 ## - Term 99286 - 99339 12.6 96 46 Op 1 . - CDS 99379 - 99708 511 ## COG0526 Thiol-disulfide isomerase and thioredoxins 97 46 Op 2 . - CDS 99778 - 99882 66 ## - Prom 100016 - 100075 3.2 98 47 Op 1 9/0.000 - CDS 100166 - 101269 1194 ## COG0327 Uncharacterized conserved protein 99 47 Op 2 . - CDS 101285 - 102016 767 ## COG2384 Predicted SAM-dependent methyltransferase - Prom 102129 - 102188 8.9 - TRNA 102209 - 102283 87.4 # Met CAT 0 0 - Term 102155 - 102195 8.4 100 48 Op 1 1/0.154 - CDS 102349 - 102912 647 ## COG0302 GTP cyclohydrolase I - Prom 102932 - 102991 2.0 - Term 102923 - 102991 3.7 101 48 Op 2 22/0.000 - CDS 102994 - 103749 347 ## COG0602 Organic radical activating enzymes 102 48 Op 3 . - CDS 103736 - 104074 454 ## COG0720 6-pyruvoyl-tetrahydropterin synthase - Prom 104160 - 104219 6.0 - Term 104185 - 104236 14.3 103 49 Op 1 31/0.000 - CDS 104254 - 105435 1421 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 104 49 Op 2 . - CDS 105443 - 107215 1182 ## COG0358 DNA primase (bacterial type) - Prom 107244 - 107303 9.9 - Term 107401 - 107458 11.4 105 50 Op 1 . - CDS 107471 - 109099 2334 ## COG1418 Predicted HD superfamily hydrolase - Prom 109119 - 109178 6.6 106 50 Op 2 . - CDS 109191 - 109634 422 ## Vpar_1198 regulatory protein RecX 107 50 Op 3 5/0.000 - CDS 109637 - 110677 1604 ## COG0468 RecA/RadA recombinase 108 50 Op 4 . - CDS 110682 - 111929 304 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 109 50 Op 5 . - CDS 111967 - 113313 2200 ## PROTEIN SUPPORTED gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase 110 50 Op 6 . - CDS 113369 - 114406 909 ## COG1840 ABC-type Fe3+ transport system, periplasmic component - Term 114431 - 114461 1.6 111 51 Op 1 . - CDS 114463 - 116409 1632 ## COG1032 Fe-S oxidoreductase 112 51 Op 2 . - CDS 116449 - 116901 477 ## COG1426 Uncharacterized protein conserved in bacteria 113 51 Op 3 . - CDS 116950 - 119694 2993 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 119714 - 119773 3.5 114 51 Op 4 . - CDS 119777 - 121078 1036 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Prom 121108 - 121167 4.2 115 52 Op 1 13/0.000 - CDS 121575 - 123380 2289 ## COG0173 Aspartyl-tRNA synthetase 116 52 Op 2 . - CDS 123389 - 124660 1368 ## COG0124 Histidyl-tRNA synthetase 117 52 Op 3 . - CDS 124660 - 126087 1063 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 118 52 Op 4 . - CDS 126080 - 126568 561 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 119 52 Op 5 . - CDS 126610 - 127245 829 ## COG0491 Zn-dependent hydrolases, including glyoxylases 120 52 Op 6 . - CDS 127245 - 129485 2365 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 121 52 Op 7 . - CDS 129497 - 131479 1824 ## COG0608 Single-stranded DNA-specific exonuclease - Prom 131542 - 131601 17.8 - Term 131618 - 131658 9.0 122 53 Tu 1 . - CDS 131674 - 133092 1418 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes - Prom 133186 - 133245 6.2 - Term 133365 - 133400 7.1 123 54 Op 1 14/0.000 - CDS 133418 - 133702 491 ## PROTEIN SUPPORTED gi|227372241|ref|ZP_03855723.1| LSU ribosomal protein L27P 124 54 Op 2 14/0.000 - CDS 133715 - 134029 439 ## PROTEIN SUPPORTED gi|227372240|ref|ZP_03855722.1| predicted ribosomal protein 125 54 Op 3 . - CDS 134032 - 134343 511 ## PROTEIN SUPPORTED gi|227372239|ref|ZP_03855721.1| LSU ribosomal protein L21P - Prom 134457 - 134516 7.4 - Term 134482 - 134523 5.2 126 55 Op 1 . - CDS 134545 - 135084 705 ## COG1971 Predicted membrane protein 127 55 Op 2 2/0.077 - CDS 135155 - 136582 1768 ## COG1530 Ribonucleases G and E 128 55 Op 3 1/0.154 - CDS 136617 - 137312 892 ## COG5011 Uncharacterized protein conserved in bacteria 129 55 Op 4 . - CDS 137284 - 139167 2097 ## COG1032 Fe-S oxidoreductase - Term 139181 - 139218 0.8 130 56 Op 1 1/0.154 - CDS 139223 - 140326 1115 ## COG0772 Bacterial cell division membrane protein 131 56 Op 2 . - CDS 140335 - 141258 1119 ## COG2894 Septum formation inhibitor-activating ATPase 132 56 Op 3 . - CDS 141260 - 143086 2169 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Prom 143124 - 143183 2.3 133 57 Op 1 . - CDS 143202 - 143696 360 ## Vpar_1225 rod shape-determining protein MreD 134 57 Op 2 22/0.000 - CDS 143693 - 144610 1146 ## COG1792 Cell shape-determining protein 135 57 Op 3 4/0.077 - CDS 144612 - 145649 1361 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 145674 - 145733 4.2 - Term 145762 - 145820 3.4 136 58 Tu 1 . - CDS 145929 - 146627 609 ## COG2003 DNA repair proteins - Prom 146651 - 146710 3.3 137 59 Op 1 . - CDS 146810 - 147376 553 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 138 59 Op 2 . - CDS 147463 - 148083 541 ## Vpar_1230 hypothetical protein - Prom 148123 - 148182 4.7 - Term 148145 - 148200 17.1 139 60 Op 1 . - CDS 148236 - 149441 1729 ## COG0282 Acetate kinase 140 60 Op 2 . - CDS 149445 - 150008 542 ## Vpar_1232 hypothetical protein - Prom 150036 - 150095 6.8 + Prom 150023 - 150082 7.3 141 61 Tu 1 . + CDS 150195 - 151544 1059 ## COG1323 Predicted nucleotidyltransferase + Term 151653 - 151701 13.3 - Term 151382 - 151425 1.5 142 62 Op 1 4/0.077 - CDS 151669 - 152190 616 ## COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 143 62 Op 2 15/0.000 - CDS 152284 - 153207 288 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit - Prom 153227 - 153286 5.8 144 62 Op 3 . - CDS 153294 - 153734 374 ## COG0597 Lipoprotein signal peptidase - Prom 153767 - 153826 10.4 - Term 153793 - 153835 6.5 145 63 Tu 1 . - CDS 153843 - 154007 176 ## Vpar_1237 4Fe-4S ferredoxin iron-sulfur binding domain protein - Term 154430 - 154481 -0.5 146 64 Tu 1 . - CDS 154499 - 154762 419 ## SGO_1740 integral membrane protein - Prom 154858 - 154917 8.0 - Term 154929 - 154968 9.1 147 65 Op 1 . - CDS 155003 - 156304 1680 ## COG0471 Di- and tricarboxylate transporters 148 65 Op 2 . - CDS 156343 - 156600 65 ## Vpar_1239 hypothetical protein - Prom 156711 - 156770 5.2 - Term 156738 - 156771 4.7 149 66 Op 1 9/0.000 - CDS 156794 - 157915 1381 ## COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit - Term 157930 - 157978 10.2 150 66 Op 2 . - CDS 157986 - 158369 732 ## COG0511 Biotin carboxyl carrier protein - Prom 158409 - 158468 4.5 151 67 Op 1 . - CDS 158471 - 158638 294 ## Vpar_1242 hypothetical protein 152 67 Op 2 . - CDS 158662 - 159009 433 ## Vpar_1243 sodium pump decarboxylase, gamma subunit + Prom 158858 - 158917 4.4 153 68 Tu 1 . + CDS 158969 - 159064 71 ## + Term 159220 - 159259 1.1 154 69 Tu 1 . - CDS 159083 - 160612 2030 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - Prom 160640 - 160699 6.4 155 70 Op 1 2/0.077 - CDS 160763 - 161185 684 ## COG0346 Lactoylglutathione lyase and related lyases 156 70 Op 2 13/0.000 - CDS 161237 - 162175 1134 ## COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family - Term 162199 - 162238 1.6 157 70 Op 3 10/0.000 - CDS 162254 - 162649 712 ## COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 158 70 Op 4 . - CDS 162678 - 164324 550 ## PROTEIN SUPPORTED gi|163787732|ref|ZP_02182179.1| ribosomal protein L11 methyltransferase 159 70 Op 5 . - CDS 164353 - 165858 1537 ## COG0427 Acetyl-CoA hydrolase 160 71 Op 1 . - CDS 166383 - 167621 1048 ## COG3307 Lipid A core - O-antigen ligase and related enzymes 161 71 Op 2 8/0.000 - CDS 167631 - 168938 1600 ## COG0285 Folylpolyglutamate synthase 162 71 Op 3 . - CDS 168951 - 171608 2977 ## COG0525 Valyl-tRNA synthetase 163 71 Op 4 . - CDS 171629 - 172519 526 ## COG0805 Sec-independent protein secretion pathway component TatC 164 71 Op 5 . - CDS 172521 - 173492 1084 ## COG0142 Geranylgeranyl pyrophosphate synthase 165 71 Op 6 4/0.077 - CDS 173489 - 174187 469 ## COG0218 Predicted GTPase 166 71 Op 7 18/0.000 - CDS 174187 - 176496 2795 ## COG0466 ATP-dependent Lon protease, bacterial type - Term 176514 - 176555 8.3 167 71 Op 8 24/0.000 - CDS 176562 - 177815 275 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 168 71 Op 9 29/0.000 - CDS 177828 - 178421 708 ## COG0740 Protease subunit of ATP-dependent Clp proteases 169 71 Op 10 . - CDS 178458 - 179762 2124 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) - Prom 179819 - 179878 5.8 - Term 179859 - 179904 6.7 170 72 Tu 1 . - CDS 179926 - 180381 698 ## COG0517 FOG: CBS domain - Prom 180409 - 180468 5.0 171 73 Op 1 . - CDS 180493 - 180972 471 ## COG1576 Uncharacterized conserved protein 172 73 Op 2 . - CDS 180975 - 181781 602 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - Prom 181806 - 181865 6.3 173 74 Tu 1 . - CDS 181887 - 183074 1219 ## COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit - Prom 183098 - 183157 6.5 - Term 183130 - 183168 6.1 174 75 Tu 1 . - CDS 183279 - 184664 416 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 184713 - 184772 3.4 175 76 Op 1 . - CDS 184810 - 187359 2946 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 176 76 Op 2 1/0.154 - CDS 187377 - 188726 1132 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 177 76 Op 3 1/0.154 - CDS 188723 - 190414 1588 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 178 76 Op 4 3/0.077 - CDS 190443 - 191771 1533 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 179 76 Op 5 8/0.000 - CDS 191826 - 192761 1223 ## COG0549 Carbamate kinase - Term 192783 - 192818 4.1 180 76 Op 6 . - CDS 192830 - 194023 1379 ## COG0078 Ornithine carbamoyltransferase - Prom 194105 - 194164 4.5 181 77 Op 1 4/0.077 - CDS 194176 - 195486 1790 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 182 77 Op 2 1/0.154 - CDS 195499 - 196710 1425 ## COG1171 Threonine dehydratase 183 77 Op 3 . - CDS 196720 - 197352 532 ## COG2964 Uncharacterized protein conserved in bacteria - Prom 197506 - 197565 10.3 - Term 197654 - 197712 14.8 184 78 Op 1 . - CDS 197750 - 198169 734 ## COG0716 Flavodoxins 185 78 Op 2 . - CDS 198180 - 198746 279 ## Vpar_1275 hypothetical protein - Prom 198803 - 198862 7.6 186 79 Op 1 . - CDS 198872 - 199504 562 ## Vpar_1276 hypothetical protein 187 79 Op 2 . - CDS 199542 - 201245 2149 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 188 79 Op 3 . - CDS 201313 - 202362 1367 ## COG1052 Lactate dehydrogenase and related dehydrogenases - Prom 202384 - 202443 7.8 - Term 202420 - 202468 10.5 189 80 Tu 1 . - CDS 202486 - 202953 605 ## COG1970 Large-conductance mechanosensitive channel - Prom 202997 - 203056 6.6 - Term 203166 - 203208 9.6 190 81 Tu 1 . - CDS 203238 - 204932 1476 ## Vpar_1280 ATP-dependent endonuclease of the OLD family-like protein - Prom 205015 - 205074 5.5 - Term 204996 - 205036 7.0 191 82 Tu 1 . - CDS 205077 - 205964 778 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 205989 - 206048 9.5 - Term 206132 - 206171 8.2 192 83 Op 1 . - CDS 206177 - 207676 1994 ## COG0498 Threonine synthase - Prom 207766 - 207825 4.5 - Term 207788 - 207834 1.1 193 83 Op 2 . - CDS 207859 - 208800 1337 ## COG2837 Predicted iron-dependent peroxidase - Prom 208829 - 208888 7.1 - TRNA 209082 - 209157 90.5 # Lys CTT 0 0 - Term 209159 - 209229 3.2 194 84 Op 1 . - CDS 209241 - 209543 148 ## Vpar_1284 hypothetical protein 195 84 Op 2 . - CDS 209545 - 210510 970 ## COG2896 Molybdenum cofactor biosynthesis enzyme 196 84 Op 3 . - CDS 210537 - 210977 563 ## COG2258 Uncharacterized protein conserved in bacteria - Prom 211095 - 211154 11.8 - Term 211137 - 211178 5.7 197 85 Tu 1 . - CDS 211191 - 212555 442 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 212576 - 212635 6.3 - Term 212584 - 212631 0.3 198 86 Op 1 3/0.077 - CDS 212700 - 213317 779 ## COG3404 Methenyl tetrahydrofolate cyclohydrolase 199 86 Op 2 . - CDS 213347 - 215017 1989 ## COG2759 Formyltetrahydrofolate synthetase - Prom 215125 - 215184 7.3 - Term 215228 - 215265 7.1 200 87 Tu 1 . - CDS 215294 - 216562 1653 ## COG0471 Di- and tricarboxylate transporters - Prom 216590 - 216649 4.3 - Term 216598 - 216640 4.0 201 88 Op 1 11/0.000 - CDS 216665 - 217285 238 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 202 88 Op 2 . - CDS 217276 - 218178 241 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 218347 - 218406 8.8 - Term 218512 - 218543 -0.5 203 89 Tu 1 . - CDS 218564 - 219433 775 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 219622 - 219681 5.8 - Term 219650 - 219691 3.0 204 90 Tu 1 . - CDS 219707 - 220042 360 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 220095 - 220154 7.8 - Term 220321 - 220365 3.0 205 91 Op 1 4/0.077 - CDS 220390 - 221625 1181 ## COG0303 Molybdopterin biosynthesis enzyme 206 91 Op 2 . - CDS 221606 - 222730 748 ## COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A 207 91 Op 3 . - CDS 222723 - 223253 603 ## COG3859 Predicted membrane protein - Prom 223292 - 223351 6.1 + Prom 223341 - 223400 7.6 208 92 Tu 1 . + CDS 223437 - 224423 1410 ## COG0516 IMP dehydrogenase/GMP reductase + Term 224454 - 224488 6.0 - Term 224505 - 224546 8.0 209 93 Op 1 5/0.000 - CDS 224561 - 225844 1448 ## COG0477 Permeases of the major facilitator superfamily - Term 225862 - 225912 12.3 210 93 Op 2 . - CDS 225922 - 227100 1531 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 227212 - 227271 4.4 - Term 227220 - 227267 10.8 211 94 Tu 1 . - CDS 227274 - 227456 320 ## - Prom 227531 - 227590 4.4 - Term 227511 - 227571 -0.9 212 95 Op 1 13/0.000 - CDS 227594 - 228781 1411 ## COG4992 Ornithine/acetylornithine aminotransferase 213 95 Op 2 8/0.000 - CDS 228867 - 229724 944 ## COG0548 Acetylglutamate kinase 214 95 Op 3 . - CDS 229735 - 230685 977 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 230718 - 230777 4.0 215 96 Op 1 . - CDS 230796 - 231806 1145 ## COG0078 Ornithine carbamoyltransferase 216 96 Op 2 . - CDS 231838 - 233022 1260 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 233087 - 233146 7.1 - Term 233205 - 233250 10.7 217 97 Op 1 . - CDS 233251 - 233340 91 ## 218 97 Op 2 . - CDS 233395 - 234573 1183 ## COG1409 Predicted phosphohydrolases 219 97 Op 3 . - CDS 234580 - 235170 807 ## COG0288 Carbonic anhydrase - Prom 235233 - 235292 6.0 - Term 235270 - 235324 14.2 220 98 Op 1 32/0.000 - CDS 235355 - 235867 690 ## COG0440 Acetolactate synthase, small (regulatory) subunit 221 98 Op 2 . - CDS 235876 - 237603 2054 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 237743 - 237802 7.6 + Prom 237649 - 237708 6.5 222 99 Tu 1 . + CDS 237795 - 238073 408 ## Vpar_1314 hypothetical protein + Term 238097 - 238144 12.6 - Term 238079 - 238137 16.3 223 100 Op 1 . - CDS 238151 - 238651 411 ## Vpar_1315 hypothetical protein 224 100 Op 2 . - CDS 238641 - 238988 257 ## Vpar_1316 hypothetical protein 225 100 Op 3 . - CDS 238998 - 239813 1059 ## COG0500 SAM-dependent methyltransferases - Prom 239962 - 240021 7.3 226 101 Tu 1 . - CDS 240032 - 240115 74 ## - Prom 240153 - 240212 5.8 - Term 240116 - 240145 -0.2 227 102 Tu 1 . - CDS 240218 - 241006 968 ## Vpar_1318 LemA family protein - Prom 241048 - 241107 6.8 - TRNA 241192 - 241266 82.7 # Arg CCG 0 0 - Term 241336 - 241387 6.1 228 103 Tu 1 . - CDS 241396 - 241854 632 ## COG0394 Protein-tyrosine-phosphatase - Prom 241879 - 241938 9.0 - Term 241864 - 241905 9.7 229 104 Op 1 . - CDS 242020 - 242787 606 ## gi|294794105|ref|ZP_06759242.1| putative ATP-dependent helicase 230 104 Op 2 . - CDS 242797 - 245097 1169 ## gi|294794106|ref|ZP_06759243.1| conserved hypothetical protein 231 104 Op 3 . - CDS 245112 - 245348 145 ## gi|294794107|ref|ZP_06759244.1| conserved hypothetical protein - Prom 245408 - 245467 10.1 - Term 245440 - 245501 8.6 232 105 Op 1 . - CDS 245503 - 247086 970 ## COG0270 Site-specific DNA methylase 233 105 Op 2 . - CDS 247087 - 247284 156 ## gi|294794109|ref|ZP_06759246.1| putative transcriptional regulator - Prom 247309 - 247368 5.7 - Term 247452 - 247490 6.2 234 106 Tu 1 . - CDS 247506 - 249749 2643 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 249812 - 249871 4.1 - Term 249810 - 249862 14.2 235 107 Op 1 . - CDS 249896 - 250627 926 ## Vpar_1323 hypothetical protein - Prom 250781 - 250840 8.6 - Term 250829 - 250861 5.0 236 107 Op 2 . - CDS 250881 - 252692 2578 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 252781 - 252840 9.8 - Term 252802 - 252836 -0.8 237 108 Tu 1 . - CDS 252890 - 253837 700 ## COG1600 Uncharacterized Fe-S protein - Prom 253867 - 253926 6.8 238 109 Op 1 . - CDS 253977 - 254906 1067 ## COG0812 UDP-N-acetylmuramate dehydrogenase 239 109 Op 2 . - CDS 254881 - 255246 644 ## Vpar_1327 protein of unknown function DUF964 240 110 Op 1 . - CDS 255352 - 255837 580 ## COG0219 Predicted rRNA methylase (SpoU class) 241 110 Op 2 . - CDS 255866 - 256378 703 ## COG0315 Molybdenum cofactor biosynthesis enzyme - Prom 256431 - 256490 6.1 + Prom 256385 - 256444 7.3 242 111 Tu 1 . + CDS 256487 - 257164 910 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 257188 - 257224 8.2 - Term 257168 - 257218 14.1 243 112 Tu 1 . - CDS 257272 - 258915 2023 ## COG3864 Uncharacterized protein conserved in bacteria - Prom 258985 - 259044 6.1 - Term 258934 - 258974 1.1 244 113 Op 1 . - CDS 259051 - 260151 1338 ## COG0714 MoxR-like ATPases 245 113 Op 2 . - CDS 260164 - 260970 788 ## Vpar_1333 hypothetical protein - Prom 261019 - 261078 5.5 - Term 260984 - 261017 5.4 246 114 Op 1 17/0.000 - CDS 261083 - 261733 596 ## COG0569 K+ transport systems, NAD-binding component 247 114 Op 2 . - CDS 261769 - 263130 1323 ## COG0168 Trk-type K+ transport systems, membrane components 248 114 Op 3 . - CDS 263137 - 264141 989 ## COG0524 Sugar kinases, ribokinase family - Prom 264220 - 264279 7.5 - Term 264340 - 264380 8.2 249 115 Op 1 1/0.154 - CDS 264481 - 266121 2000 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 250 115 Op 2 . - CDS 266143 - 266661 848 ## COG0716 Flavodoxins 251 115 Op 3 . - CDS 266690 - 267493 1060 ## Vpar_1339 TonB family protein 252 115 Op 4 30/0.000 - CDS 267496 - 267903 551 ## COG0848 Biopolymer transport protein 253 115 Op 5 . - CDS 267906 - 268523 688 ## COG0811 Biopolymer transport proteins 254 115 Op 6 . - CDS 268559 - 273637 6472 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 273669 - 273728 4.1 - Term 273704 - 273739 -0.8 255 116 Op 1 . - CDS 273749 - 273817 62 ## 256 116 Op 2 . - CDS 273823 - 278844 4043 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 278944 - 279003 5.1 - Term 278878 - 278947 4.5 257 117 Tu 1 . - CDS 279077 - 279967 579 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 280009 - 280068 9.5 - Term 280144 - 280201 15.1 258 118 Op 1 . - CDS 280225 - 280620 355 ## COG2832 Uncharacterized protein conserved in bacteria 259 118 Op 2 . - CDS 280620 - 281594 1155 ## COG3037 Uncharacterized protein conserved in bacteria 260 118 Op 3 11/0.000 - CDS 281465 - 281986 506 ## COG3037 Uncharacterized protein conserved in bacteria 261 118 Op 4 13/0.000 - CDS 282016 - 282291 546 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 262 118 Op 5 . - CDS 282312 - 282767 656 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) - Prom 282944 - 283003 9.3 + Prom 282936 - 282995 11.4 263 119 Op 1 35/0.000 + CDS 283020 - 284027 1073 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 264 119 Op 2 14/0.000 + CDS 284054 - 284800 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 265 119 Op 3 . + CDS 284822 - 285826 1275 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Term 285883 - 285937 9.1 - Term 285869 - 285920 16.1 266 120 Tu 1 . - CDS 286058 - 286231 194 ## Vpar_1352 hypothetical protein - Term 286589 - 286645 10.5 267 121 Op 1 21/0.000 - CDS 286661 - 287659 1059 ## COG0306 Phosphate/sulphate permeases 268 121 Op 2 . - CDS 287652 - 288281 797 ## COG1392 Phosphate transport regulator (distant homolog of PhoU) - Prom 288322 - 288381 8.1 - Term 288448 - 288509 9.3 269 122 Op 1 . - CDS 288553 - 290022 2086 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain - Prom 290060 - 290119 6.0 270 122 Op 2 . - CDS 290155 - 292101 1536 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 292195 - 292254 6.8 + Prom 292197 - 292256 7.9 271 123 Tu 1 . + CDS 292283 - 292603 484 ## Vpar_1357 hypothetical protein + Term 292610 - 292644 4.3 - Term 292592 - 292638 8.2 272 124 Tu 1 . - CDS 292647 - 293768 1185 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase - Prom 293815 - 293874 7.5 - Term 293832 - 293869 5.7 273 125 Op 1 1/0.154 - CDS 293884 - 294183 544 ## COG0776 Bacterial nucleoid DNA-binding protein - Term 294198 - 294234 -1.0 274 125 Op 2 4/0.077 - CDS 294235 - 295005 745 ## COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 275 125 Op 3 2/0.077 - CDS 294989 - 296596 1250 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid 276 125 Op 4 . - CDS 296593 - 299889 3179 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) - Prom 300068 - 300127 8.0 + Prom 300363 - 300422 6.5 277 126 Tu 1 . + CDS 300442 - 300921 496 ## gi|294794148|ref|ZP_06759285.1| hypothetical protein HMPREF0873_00745 + Term 300948 - 300990 0.1 + Prom 301100 - 301159 8.9 278 127 Tu 1 . + CDS 301198 - 301692 276 ## gi|294794149|ref|ZP_06759286.1| hypothetical protein HMPREF0873_00746 + Prom 301712 - 301771 6.2 279 128 Tu 1 . + CDS 301794 - 302201 392 ## BMEI1161 hypothetical protein - TRNA 302434 - 302518 81.7 # Leu TAG 0 0 - Term 302567 - 302614 -1.0 280 129 Tu 1 . - CDS 302827 - 302892 85 ## - Prom 302982 - 303041 4.7 281 130 Op 1 22/0.000 - CDS 303408 - 304523 732 ## COG0842 ABC-type multidrug transport system, permease component 282 130 Op 2 45/0.000 - CDS 304523 - 305635 722 ## COG0842 ABC-type multidrug transport system, permease component 283 130 Op 3 10/0.000 - CDS 305632 - 307431 378 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 284 130 Op 4 13/0.000 - CDS 307441 - 308481 979 ## COG0845 Membrane-fusion protein 285 130 Op 5 . - CDS 308503 - 310203 496 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 - Prom 310325 - 310384 8.2 + Prom 310284 - 310343 7.7 286 131 Tu 1 . + CDS 310372 - 310650 359 ## Vpar_1368 helix-turn-helix domain protein + Term 310692 - 310729 8.0 - TRNA 310774 - 310850 80.7 # Arg ACG 0 0 - TRNA 310963 - 311038 78.3 # Trp CCA 0 0 Predicted protein(s) >gi|292596541|gb|ADCV01000007.1| GENE 1 43 - 1290 1482 415 aa, chain - ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 6 405 3 406 415 293 38.0 4e-79 MTSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKE EYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYT EPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVV IFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFN KFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNIC RPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITI PTDSANAICEELKKDHIYVIALANGIRIAACGIPKKQMTGLAGKIYTAMKHLGKL >gi|292596541|gb|ADCV01000007.1| GENE 2 1539 - 2108 704 189 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1106 NR:ns ## KEGG: Vpar_1106 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 189 1 189 189 337 100.0 2e-91 MKKLVLLTLAATVVAGSAFAAAPVTKISDGSTKVQADYAFKQHVSNGGGNSNDGFGVSLQ HDLSNKAALQYSYDKLNAKNGDIKDHQLALVYKVHPNVNLYGAGTAIRTNDTELGFQAGV IGHVPLTNKVNGFAKAGWGNDIKQTYQVGAQYEVRPDVDLNVYYGYDKYSVDSNDKTAKG LHAGVGYSF >gi|292596541|gb|ADCV01000007.1| GENE 3 2189 - 3229 1645 346 aa, chain - ## HITS:1 COG:CAC1693 KEGG:ns NR:ns ## COG: CAC1693 COG0206 # Protein_GI_number: 15894970 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Clostridium acetobutylicum # 1 346 8 367 373 357 58.0 2e-98 MSDFANIKVIGVGGGGNNAVNRMVDSDLKGVQFLSANTESQVLELSKADVTIQIGEKVTK GLGAGANPQIGEEAAQESREEIIKALEGADMVFVTAGMGGGTGTGAAPIVAECAKEIGAL TVGVVTKPFAFEGKRRRAQAEKGIEFLTQKVDTIIVIPNDKLLQVVDKKCSLSDAFRTAD DVLRQGIKGISDLIQVPGLINLDFADVKTIMTEQGEALMGIGVGEGENRAADAAKMAINS PLLETSIDGAKGILLNISGSANLSLFEINEAAEIISEAADPDANIIFGSVIDESLGDTVQ ITVVATGFNSNTKNVPEFGKTTTTSRPASTTNTNSGIPDIPVFMKR >gi|292596541|gb|ADCV01000007.1| GENE 4 3368 - 3712 459 114 aa, chain - ## HITS:1 COG:BS_sbp KEGG:ns NR:ns ## COG: BS_sbp COG3856 # Protein_GI_number: 16078591 # Func_class: S Function unknown # Function: Uncharacterized conserved protein (small basic protein) # Organism: Bacillus subtilis # 8 112 5 109 121 81 42.0 4e-16 MNIYIFAIVGLIVGTTLGWLSPFHIPISYANYTSVAVLAALDAVFGGSRAALERTFDLSN FVLGFFSNVVLAVILVYVGDLIGINLYYVALIGFGLHVFINVGAIRKIIMTKRF >gi|292596541|gb|ADCV01000007.1| GENE 5 3709 - 4344 727 211 aa, chain - ## HITS:1 COG:BS_ylxW KEGG:ns NR:ns ## COG: BS_ylxW COG3879 # Protein_GI_number: 16078589 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 47 190 80 223 231 100 40.0 2e-21 MVVTQYKMTQDNIEENIRLQRAGDLAVQLREAQSERDALLKQIEELKQSGASSNVKADEQ LMMKAALTNVKGTGVSVLIEDSLKPIQSGENPNLYVIHDEDILRIVNELRAGGAEAIAIN DQRLIGTSEIRCSGPTITVNGKVFGAPFTVKAIGDPKTLNSALTMRGGVVDSLKHWGIKV TIKEENEIAIPAFTGTFREEHIKPNETGGKE >gi|292596541|gb|ADCV01000007.1| GENE 6 4405 - 5286 691 293 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1110 NR:ns ## KEGG: Vpar_1110 # Name: not_defined # Def: polypeptide-transport-associated domain protein FtsQ-type # Organism: V.parvula # Pathway: not_defined # 1 293 1 293 293 509 100.0 1e-143 MDDKQYHPSNSGEMQSSTPVHDERAVFRKRVLKIGGAVTLVLVGLFTLPIPFGSLKIIGS DKVTVQDVMVAGDIHEPVNILQISTEKLKTRLAKDLRVEEAQISYQLPFTMVVRVIERKA VAVVPAQFGYLTLDSKGQVIASEPAIQDTSVPMISGVKAGNILLGDTVVDKPILAALEYL NSLDESTFKTIAEVNIGDPDAIMAYTVSGVQIRLGDSKDLPKKAELTQSMLQDIKTTHSN VQYIDVNVSSPYIKTDVIPEVKKHQTGTKTTENSSTKKDDKKQDKQGHVEDKR >gi|292596541|gb|ADCV01000007.1| GENE 7 5315 - 6247 1097 310 aa, chain - ## HITS:1 COG:PM0144 KEGG:ns NR:ns ## COG: PM0144 COG1181 # Protein_GI_number: 15602009 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Pasteurella multocida # 1 302 5 304 309 203 40.0 3e-52 MKDRKIIVLMGGPSKEAEVSRRTGAAIAEALESKGYNAQTLELNPRTVLKDIESLGGEIV FNAIHGRYGEDGALQGLLEMAEIPYTGSGIMAHAVGMNKKVSKDVFKGANIPTATSESFN GNLESAEAIIGHIRKQFTIPVVVKSATQGSSIGVTIVRDEAQLEAAVTEALKYDPILVVE QFLDGREFTVSVLDGKALSVIEIRPHSGEYDYTSKYTVGATEYLVPAPISEEMTAEMQRI GELVYREVQGSGVIRVDIMTDHADNMYVLEYNTVPGMTATSLVPKAAKEMGIDFPTLCEK ILLTASIGKF >gi|292596541|gb|ADCV01000007.1| GENE 8 6244 - 7626 1479 460 aa, chain - ## HITS:1 COG:NMA2061 KEGG:ns NR:ns ## COG: NMA2061 COG0773 # Protein_GI_number: 15794939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 1 457 39 505 506 347 41.0 3e-95 MLDGIHKIHLIGIGGSGMRAIANILIQKGYDVSGSDIAESAVISKFRDMGATVHIGHNKE YVNGVDAIVRSTAIREDNPEIVAAKEQGITILHRSDIVKAVLDVTDGIAVAGAHGKTSTT SMIGQILVEANADPTVIIGGEVDYLKGSSCLGKGHFSVVEADESDGSFLKLHPHTIVITN IEDDHMDHYKTMDNLLNAFCEFVETLPEAGKAIVCGDNENIRYVMSRVKRTFITYGLEDN NDYVAKNIHYVDSSLVYDVYHKGINIGRISLCVPGEHNVLNSLAAFIVAHECCGVENRFI TKALGKFIGAKRRFETKGHVAGVWVVDDYAHHPTEIKATLRAAKELEKHRVICVFQPHRY TRTSLLKDEFATAFTSADEIYMTDIYSSGEDPIAGIDGRTIPDAVEAATHKVVHYVPSVD DIPAVLAKIVRPNDLVITMGAGSINQYGPKLLAILEEGLQ >gi|292596541|gb|ADCV01000007.1| GENE 9 7641 - 8750 1177 369 aa, chain - ## HITS:1 COG:BH2565 KEGG:ns NR:ns ## COG: BH2565 COG0707 # Protein_GI_number: 15615128 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Bacillus halodurans # 3 369 2 363 363 289 43.0 6e-78 MKRVIISGGGTGGHIYPAITIYKEIMKQNPDAKVLYVGTKQGLEATLVPKEGIEFTTIPV QGLQRQLSLGTLVTLGKTALGIVKANAIVCKFKPDVVIGTGGYVCGPVLLAAALHNIPTI IQEQNVIAGITNKILSRFVDVVALGYKDAEASFSKAKRVVYTGNPVRPDVLVDSRTSGRN YFNLSDDTFTVLIAGGSRGARTINNAMIDVHKHFQGVKGIKLIHITGNGEYESVLSQLGI TDGDGLGSSSLILPYLHDMPKALAAADLAVFRSGAIGLAELAVRGIPSVLIPYPYAAEDH QTYNARIFVQEGAAHMIVDKMLSAHDLIGEIEMFMANRDLLAQMGDRALQLGKPNAAHDI AKLALSIAK >gi|292596541|gb|ADCV01000007.1| GENE 10 8750 - 10120 1450 456 aa, chain - ## HITS:1 COG:BH2567 KEGG:ns NR:ns ## COG: BH2567 COG0771 # Protein_GI_number: 15615130 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Bacillus halodurans # 2 452 6 450 450 340 42.0 5e-93 MEYGDKHILVLGAGASGIGASWVLAQVGAHVVLNDYKPMTLPTAEEKRLVAAGVNIITGR QDESLLDGVDRIVISPGISLDIPIVKAAQARGIDVVSEVELAYEVSKSPIVAVTGTNGKT TTTTLLTKVLEGSGKPVHVGGNIGDSLSEVAYSMPADGFLVAELSSYQLETIKHFRPIGA IILNITPDHLARHKTMENYIAAKERIFENQLSTDYLVLNIDDPVVADMEHRAPSHILKIS QKKAVENGAYYADGQCYIAKDGVAKFVIADEDIHIPGSHNIENILTVIALSHALGVPVET IHRIISEFHGVEHRLERVKTIDGITFYNDSKATNVDSVVKALESFDQQVILLAGGHDKMT PLEDFMQLVKEHTKAVIFMGEAADRFEMAAKEAGVKPIYRALSMKEAVEQGYKLAETGDI VLLSPACSSFDWYSCFEERGDDFKRCVHMLQEGGHH >gi|292596541|gb|ADCV01000007.1| GENE 11 10204 - 11190 1139 328 aa, chain - ## HITS:1 COG:BS_mraY KEGG:ns NR:ns ## COG: BS_mraY COG0472 # Protein_GI_number: 16078583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Bacillus subtilis # 5 323 6 320 324 280 52.0 2e-75 MINHILLAFVATFIITVVLGKIAIPMLRSLHAQQSIREEGPESHQAKAGTPTMGGAFMMV ALVIGVALFAPWNVGTGMLLFLTLGHCLLGFFDDFVKAVKKRNLGLTAKQKLLGQFILAA VFCYCITEIMVVPTTLWIPVVDIQLQLGWGYYVLAFLIIVGATNAVNLTDGLDGLAGGTS AVAAIAFSVIGLMAASMTNSIGAESVAYFGAIIAAVCLGFLVYNVNPAKVFMGDTGSLAL GGAFAAMAILTKTELLLVVIGGIFVMEALSVIIQVISFKTRGVRVFKMSPIHHHFELSGW AEQTVVNRFWFGGAVLAVIGVLLATITL >gi|292596541|gb|ADCV01000007.1| GENE 12 11247 - 12605 1756 452 aa, chain - ## HITS:1 COG:all0036 KEGG:ns NR:ns ## COG: all0036 COG0770 # Protein_GI_number: 17227532 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Nostoc sp. PCC 7120 # 5 449 6 446 451 307 42.0 2e-83 MAEFTLSQVVEATQGANAHTDNIKFLDISTDTRTIESGFLFVALKGDTFDGHDFINTAIE KGATGAIVEKGRAVEGIACIEVDNTLVAYQNLARYHRRRFDIPVVAITGSSGKTTTKEMV AAVLGTEFNVLKTEKNYNNEIGLPKTLLRLTAEHEACVVEMGMRGLGQIEELALIAEPTM GIITNVGTSHIELLGSREAIAEAKGELIRCLPENSVAILNEDDPYVKAMDSLAKGKTITY GIERNATCIGSHLRYKKDGIKFTCKCYDEVFDIFLPMIGEHNVYDALAAIVAGRVLGIKS NTIRKGLSEFTGTPMRQEIVPFEDIVILNDAYNANPSSMAEAIKALGQLEGKRKIAMLGD MLELGDFSEEAHREIGQLLAEEGYSVVFTFGDAAAFIAKEAKKAGLTTFRCKSHLEMANA YSDIREKGDVILVKGSRGLRMERVVEELKDRE >gi|292596541|gb|ADCV01000007.1| GENE 13 12607 - 14091 2095 494 aa, chain - ## HITS:1 COG:CAC2129 KEGG:ns NR:ns ## COG: CAC2129 COG0769 # Protein_GI_number: 15895398 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Clostridium acetobutylicum # 4 494 3 481 482 432 44.0 1e-121 MKHLQDIVKTLHAPHVEGNTAVEILDVTADSRAVKAGSLFIALDGATVDGHNYVNKAIEA GAVAVLVSKPVDVSGDVCVITVEDTRAAMMVCVPYFFDYPANSMRMIGVTGTNGKTTTSH MIRHILKAQGHKVGVIGTVHIMIGDTSYPIHNTTPDVVDLQHILHQMVEEGVTYCVMEVS SHALALGRVSGVEYDTAVFTNLTQDHLDFHKTFENYLAAKCKLFEQVSKPNQVKSGKGAV INIDDAYGHRVVEKTTAPIITYSIDGSGTLNAHDVDMTPKSSRYTVSYDGHDYTVAMNTT GLFNVYNTLAAIGACLLEGISMEDIDKALKTFSAVPGRFELIEEGQPFAVVVDYAHTPDG LENILQTAKAIQENRIIVVFGCGGDRDATKRPIMGRIAAQYGDVVYVTSDNPRTEDPVQI VKDVEVGVKDGLREGTHYEVIVDRREAIQHAIQNAQPGDIVLIAGKGHEDYQILKDKTIH FDDREEARAALKEI >gi|292596541|gb|ADCV01000007.1| GENE 14 14147 - 14551 518 134 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1118 NR:ns ## KEGG: Vpar_1118 # Name: not_defined # Def: cell division protein FtsL # Organism: V.parvula # Pathway: not_defined # 1 134 1 134 134 217 100.0 9e-56 MLARKAVVGQVKGDMLVIAQGRRRSANVALDLSPMMWQVVYGIAALVACLLIMMVMNAYS TKLGYEVVKTQQAVVQLTKDNDALDVEVASLKSPVRIQQIAEEQLGMVLPDSFVYSTKSA VTERNVQEKQQIID >gi|292596541|gb|ADCV01000007.1| GENE 15 14573 - 15505 947 310 aa, chain - ## HITS:1 COG:CAC2132 KEGG:ns NR:ns ## COG: CAC2132 COG0275 # Protein_GI_number: 15895401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Clostridium acetobutylicum # 1 310 1 310 312 350 57.0 2e-96 MEFNHTSVLLRETVDSVVTNPKGIYVDCTLGGAGHAHAVGEMLDPEGMIIGLDQDEDALS VARQRLSDLKCQVLTIPTNFSNLKEALQNAGIYEVDGFIFDLGVSSYQLDTPERGFSYMN DGPLDMRMDKDAPLTAEEIVNEYDSEQLLQIIRDYGEERWAKRIVEFIVEARQEKRITTT GELVRIIKNAIPAKARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDAVSMLKPKGKIGV ITFHSLEDRITKQTFKELSTACICPPQLPVCVCNHKAVVKAKNKAIEPSIGEIEVNPRAR SAKLRVAVKL >gi|292596541|gb|ADCV01000007.1| GENE 16 15515 - 15946 496 143 aa, chain - ## HITS:1 COG:BH2576 KEGG:ns NR:ns ## COG: BH2576 COG2001 # Protein_GI_number: 15615139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 138 1 138 143 147 50.0 7e-36 MFMGEYNHTIDTKGRMIIPAKIREQLGDLCIVTKGLDNCLAIYTEEAWKKISTALQSQSS TKASVRALKRFVFGSAAELEYDKQGRVLIPVPLREYASLDKQAVIVGAGDHVEIWSREKY DFYDEQVAESMEELVEGLEGIML >gi|292596541|gb|ADCV01000007.1| GENE 17 16350 - 16670 483 106 aa, chain - ## HITS:1 COG:CAC3083 KEGG:ns NR:ns ## COG: CAC3083 COG0526 # Protein_GI_number: 15896334 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Clostridium acetobutylicum # 13 103 12 102 105 90 45.0 6e-19 MSELKDLKTAEYQDLVNQGGVTVVDFWAPWCGYCVRMMPIIEEIAGELEGKANFVKVNAD EEPELARNLQVEVLPTFVILKDGEVVDRKIGFLPKGDLQAAIESKF >gi|292596541|gb|ADCV01000007.1| GENE 18 16680 - 17054 489 124 aa, chain - ## HITS:1 COG:TM1435 KEGG:ns NR:ns ## COG: TM1435 COG1832 # Protein_GI_number: 15644186 # Func_class: R General function prediction only # Function: Predicted CoA-binding protein # Organism: Thermotoga maritima # 13 98 10 95 131 62 40.0 2e-10 MTIQQALDQKVWAVIGATHKTEKFGYKIYKCLKDHGYEVYPVNPNIAEIDGDICYSSLSA LPVVPAVVDFVVPEAAGLAALDECKELGISVVWLQPGADKPSVVEKAHALDLHVIQDCVL VQLP >gi|292596541|gb|ADCV01000007.1| GENE 19 17187 - 18161 635 324 aa, chain - ## HITS:1 COG:aq_1221 KEGG:ns NR:ns ## COG: aq_1221 COG0008 # Protein_GI_number: 15606455 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Aquifex aeolicus # 1 285 4 273 473 183 35.0 5e-46 MKGRFAPSPTGYIHLGNVWIALLSYISTKQQKGQYVVRMEDIDIQRSKRELGEALLDDLE WLGFEWDEGPRVGGPESTYWQSERQTYYGDVLEHLASEKLIYPCFCNRTRLHSIASAPHV GEVVHRYDGHCRHLEDKLIKEFMMSKEPSLRLAVNFCDIDFVDRWQGFQHIHLEGELDDY VLRRGDGMYAYNLAVVLDDISMGITEVIRGDDLLETTGQQIYLYRTLQTSFKSKNIQLPS YGHAPLLIDSEGHRLSKRQKSITIRELRENQWSPNRILGELAIVGGLVEAHTLSRREISL SELIEIDLNVPSLSQKAIEIQIKE >gi|292596541|gb|ADCV01000007.1| GENE 20 18242 - 21151 3149 969 aa, chain - ## HITS:1 COG:CAC3006 KEGG:ns NR:ns ## COG: CAC3006 COG1026 # Protein_GI_number: 15896258 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Clostridium acetobutylicum # 4 968 7 974 976 746 42.0 0 MEINKVYSGFRLDRIERIDEINGTAYEMKHEKSGARLIYIDSPDSNKVFNIAFRTTPHNS TGVAHIMEHSVLCGSRKFPLKEPFVELVKGSLNTFLNAMTYPDKTMYPVASKNDKDFHNL MDVYLDAVLYPRVREDAEIVMQEGWHYELDSADDELTYKGVVFNEMKGVYSSPDSVLERQ MMRELFPDTTYGVDSGGDPDHITDLTYEEFQEFYRVHYHPSNSYIFLYGDMNIEEQLAFL NDEYLSHFDAIEVNTEVGIQTPFTEGKVVSYPYSVGSEEPTDNRTLHSFAYVLPDVTPEH SLAFEVLTHALLTSPAAPLKQALVKAGIGSDVSGYYLDSIRQPLWTVQATGSNLDKQADL QRIVESTLQELCDNGLDKELLEASLNSIEFALRESDFGGRPIGLAYVIRMMDNWLYDNDP LELLHYEEALVNIRKGLSGTYFEDLIRQSILNNNHKVLVSIYPERGLQERKDAEVKEYLA SVKAKMTPEEIEAIVEQTKRLKLRQEAPDSDEALASIPLLELSDLNPNIEEVERRESKIG NTTVHFVPTFTKGINYVGLYFNLSCLTEDELFYADILSDIIGRINTSERGYEALAKDINM NLGGLSSDITAISKDGKRDEFTPLMIVRAKALHSKLPDLCRLINEVVQKADYSDHRRLTE LVQESKAIWDNEAFRRGNSIVSQRVMAQVSAVGKFRDNGNFGYYQKISELASNPAALPLL PEKLADVARKIFRANNVDIMFVGEEGELEAFEHLMKPLIETWDTTDLSNDTLKITRLSGN DGIVTAGKVQYVAQGGNFIDHGYKHVGPMSVLETILRYEYLWIRIRVQGGAYGAFANFYD DGNMIFCSYRDPNLVETLNVYKELPQYLREFTLTDREMRKYIIGTMSSLDLPMTPALRGP RAMGMYFSGAKLEDKVEFRKQVIACKPENIVALADVVEPVLKDNHICTMGNEQKIKDAGK VFDNIISLG >gi|292596541|gb|ADCV01000007.1| GENE 21 21292 - 21609 388 105 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1125 NR:ns ## KEGG: Vpar_1125 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 105 1 105 105 197 99.0 7e-50 MDSLRSFMDEMLNDQGRKEGFISDLLGNLKNQPIPTLEQAQTGYTTMSNLHGIFYDYDKS EVTITYKVVPDMYQPYTLSFIQFEAVLEGLLTLRRNQKWQMQHNK >gi|292596541|gb|ADCV01000007.1| GENE 22 21617 - 22846 1819 409 aa, chain - ## HITS:1 COG:lin1198 KEGG:ns NR:ns ## COG: lin1198 COG0527 # Protein_GI_number: 16800267 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Listeria innocua # 1 407 1 404 404 340 46.0 3e-93 MALIVKKFGGSSVATPEKIFNIVDRVLREKQADDKIVLVVSAMGDTTDDLVALAKQVTSK PYGREMDRLLSTGEQVTIALMAMAFNERGQESVSLTGDQAGITSSDTFNKGRILGVDPNR VFEALDEGKIVVVAGFQGITEYGDMVTLGRGGSDTTAVALAGAMKADVCEIFTDVDGVYS TDPRVAKEAFKLEEVTYGEMLEMARLGAGVMQPRAVEMGFRYGVPIHVRSTFSDKPGTII REDYTVEANKHVITGVADDTNTAKVALVGVENKPGVAATVFKALAARNVDVDMIVQSIRS VGEPKTDLIFTVAMDDVVLAREVLEELQKAVDIEAVNIDEKMAKVSIIGAGMLGQPGVAA QMFDILSQEGINIEIISTSEISISCLVAEDRVKDAVRVIHNGLLLDQRG >gi|292596541|gb|ADCV01000007.1| GENE 23 23166 - 23555 584 129 aa, chain - ## HITS:1 COG:TM0658 KEGG:ns NR:ns ## COG: TM0658 COG2033 # Protein_GI_number: 15643423 # Func_class: C Energy production and conversion # Function: Desulfoferrodoxin # Organism: Thermotoga maritima # 1 128 1 129 131 126 50.0 9e-30 MAVHDYIKSGDFATEKHVPVIETVDTVKAGETFHVTLSVGKDIAHPNTVEHHIDWIKLYF VAEGTQLPFEVGAIEFNVHGDGATANEGPVAAVSEGTLAVALKKSGKLIAVSYCNIHGLW ESEKDIVVA >gi|292596541|gb|ADCV01000007.1| GENE 24 23695 - 24237 644 180 aa, chain - ## HITS:1 COG:slr0260 KEGG:ns NR:ns ## COG: slr0260 COG2109 # Protein_GI_number: 16330528 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Synechocystis # 3 180 31 203 203 142 43.0 3e-34 MEERGLILVNTGNGKGKTTAALGVVLRAVGQGFKVLILQFIKSGNGYGELAGLAKLGDQV EIRSMGKGFIYYKRDEVGEAELARHKEAAQAAWRTLVEEVNSDKWDLIVMDEINNAINYE LIDVHSVVEMLNNKPKRLHVVLTGRYAKPEIIDMADTVTEMKVVKHAYEKGIKAAKGIEF >gi|292596541|gb|ADCV01000007.1| GENE 25 24323 - 25702 1531 459 aa, chain - ## HITS:1 COG:MA3626 KEGG:ns NR:ns ## COG: MA3626 COG1797 # Protein_GI_number: 20092426 # Func_class: H Coenzyme transport and metabolism # Function: Cobyrinic acid a,c-diamide synthase # Organism: Methanosarcina acetivorans str.C2A # 6 458 14 494 497 326 40.0 6e-89 MNTVQIPRVVIAGTNSGVGKTTIVAGLLAAYANGGRTVQSFKVGPDYIDPGFHKIASGRD SYNLDTWLVPPHKLTPFFATMAHDVDLAIIEGVMGLYDGGREGVSSTAQIAKQLNAPVVL VIDCKAMGESAAAIAKGFRDYDPEVNFGGVILNRLGSANHERMVREGMDKIGVPVIGAIY RDDRMHSPERHLGLTPVTEIDPTEAINTIREAVEKMVNLDALLEIATNAPTIELPDSIDV KSIEKRVKIGVAYDEAFSFYYPASLAALEEKGAELVYFSPLNDSVIPDVDGLVFGGGFPE MFLFQLSSNESMKESIRQANAQGMPIYAECGGLMYLCESIHDFEGSVYKTVGIVPANCVM QQKLQKVGYVTATAKRDTLLGAMNTAIRGHEFHFSTMEPTIDDFPWAFHLEGGRKLQSYD GGYATKNVLASYLHLNFAGSDEGAQHFVDTCAAYKSQKL >gi|292596541|gb|ADCV01000007.1| GENE 26 25732 - 26439 1080 235 aa, chain - ## HITS:1 COG:STM2024 KEGG:ns NR:ns ## COG: STM2024 COG2243 # Protein_GI_number: 16765354 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-2 methylase # Organism: Salmonella typhimurium LT2 # 1 233 1 232 237 163 36.0 3e-40 MKGKLYGIGVGPGDSELMTVKAARIVGEADIIITPKTEKKDGSVALDIASPYIQEHTEIV PVVFPMVLDDSTQEEGWQEAKRVILSYLDEGKSVVFLTLGDPMFYSTYMYVYRLIENTGH EIETIPGVTAFCAIGSHLGYPIVEKEEVLAIVPATAPKEKIDAVLAVADDAVIMKVYKNF DEVQETLIKHNMADDAVMISRVGLPDEQVFVGLDNIPKDTKLNYLSTILAKRKDR >gi|292596541|gb|ADCV01000007.1| GENE 27 26527 - 27381 1020 284 aa, chain - ## HITS:1 COG:CAC1373 KEGG:ns NR:ns ## COG: CAC1373 COG4822 # Protein_GI_number: 15894652 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Clostridium acetobutylicum # 1 283 1 278 278 169 35.0 5e-42 MKQAILVVAFGSTVDSAREHNIDSVVEHIRKSYPDYTVELAFSSRIIVKRLRERGIEIPT EQGALEKLIQEGYTHVYVQPLHFTGGEEFDKLKNNVLAHEGEGQLEVLRVGRPLVYYMGQ EEHPDDYQILIDRFIKSLNISKDDGLLLVGHGGLGSGNSSYGNLQFKLIRNGLTNVRIAV LENAPYVSDVAMPWEWLDGKRPKTIYVHPLLLVLGDHAQNDLFGDEEDSVVNELSGAGYA VKPIHSALGEYEAIHDIFRQHVQDCIDDLYGKRSPHRPAIPNIK >gi|292596541|gb|ADCV01000007.1| GENE 28 27591 - 28472 1018 293 aa, chain - ## HITS:1 COG:CAC1373 KEGG:ns NR:ns ## COG: CAC1373 COG4822 # Protein_GI_number: 15894652 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Clostridium acetobutylicum # 2 278 3 274 278 115 25.0 8e-26 MKGIIIASFGSIYQDAVEKSIGSIEKKVRSMYSDMEVRRVFLSDALVEKWNEKYEDKISS FTEAMQDFARMGIDEVYIQPITLVADQCYQQMRKQALKFLHSNEYGFSQVNIGKPLLTSL GVKNYADDYEATLESIVRHVNTKALNKSVVLMANGQNQLEFSTLQLKAMYGAAPNVVVFT TNGFPTFKQALTFLDRMGHKDLLVVPLALIGSTHLMDYLGGERSDSIYALLAEEGYNVDI WNEGLGENPYVQDLFLKHLGQAIRMSDRKRPMPRESVKPVMTNSRLEAQGLIS >gi|292596541|gb|ADCV01000007.1| GENE 29 28934 - 29923 1262 329 aa, chain + ## HITS:1 COG:CAC1373 KEGG:ns NR:ns ## COG: CAC1373 COG4822 # Protein_GI_number: 15894652 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Clostridium acetobutylicum # 63 318 2 255 278 183 37.0 4e-46 MKKQLALASAILGLAVSFGAPVVSNAAYQLNEEVKDPTPALKEAAAIGVRTHNTEALQNL PNKDAMVVMSFGTTYKDTRVKTIDATVDAIKAAHPNTKVITAFTSHIIRDRIQQKEGITY PTPEEALAELKKDGYTRVALASLDVIPGMEYNYDAAVYNLYKNDFKKMTLGTSLMYWMGQ ENQTDQVIETLKAVQSQFPKLGKEDGLLIMAHGTPDPSNAYYSVIQDRIHTLGMKNVFIY TVEGTPNLEQVIPQLKLHGIKHVTLMPFMMVAGDHANNDMAGNEPDSHKSILEKEGFKVD TYIHGLGENQNIRNLFVERANEAWDALEK >gi|292596541|gb|ADCV01000007.1| GENE 30 29975 - 30916 1143 313 aa, chain + ## HITS:1 COG:BH3290 KEGG:ns NR:ns ## COG: BH3290 COG0614 # Protein_GI_number: 15615852 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Bacillus halodurans # 1 303 1 309 319 109 26.0 6e-24 MKKLLLGSIALVMIVLALAGCGKTTSSSSATTKELTFNGQTYTVPKDPQKIAVLSNSVLS MLYAVDGKAISRANTTDKLAPELEALPALGQTANINMEQLLGLKPDVVLGLVNQHKKYES QLQANNIPTVLFDYDGIKDNVPMLTFLGELTNHQDKAKSVITTYENNITKVKDAVKNQQP ARVAVLRATGKGVTAETDEAVTASMVKELGMTNVVSSHLDGTTKDKTVPYSLETLTADNP DIIFVVTMGKEEEITKAMKQAMTDNPAWANLKAVQNNRVIYLPSKLFLLNPGLQTPEAMA RLVKEAYGINVTF >gi|292596541|gb|ADCV01000007.1| GENE 31 30984 - 31766 207 260 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 242 1 236 311 84 28 5e-15 MNTAIDVKQLSVTLGNRHILHDINVSVPIGKITTLIGPNGCGKSTLLRSMIGYIHSPHEC ITIFDKPLQSYSQNHLARQMAFLPQVPNMPKDMTVEELVYCGRYPYQTWWKNTAKEDREI VDYALDITKTNHLREQLIPSLSGGERQRVWIAMALAQQPKLLVLDEPTTYLDINHQLEIM ELLKRLNKEQDLTVLMVLHELTQAVQYSHYMAIIKEGHLVTSGETSKIISDELFRDVFSV DVQLDTFDNKKYVRVKGLVE >gi|292596541|gb|ADCV01000007.1| GENE 32 31766 - 32761 1076 331 aa, chain - ## HITS:1 COG:BH3291 KEGG:ns NR:ns ## COG: BH3291 COG0609 # Protein_GI_number: 15615853 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus halodurans # 30 329 29 327 332 275 51.0 7e-74 MASSNERKLFRVSVICILIIAVIMSMIISLIWGSTPVSLAEIWHTLWSSELTDTSSQIIW NIRLPRNIVAALVGACLAVSGAILQAVMKNPLADPQIVGVSSGAGLAGVIIFILFPGYDY IVPLVAFLGAMAAALMVYALAWKNGVRPSRIILAGVAVAAFLGSGISALLVFYGDRVQGA LLWMVGGLAARSWPQVEVLFPYAIVGLMFACLGAKRLTILSLGDETAKGLGLKVEQTRFI MTAVAALLAAGAVSIAGLIGFVGLVIPHMLRLIIGNDYAYLLPGSALLGALVLVVSDTIG RVMWSPIEVPVGIIMAFFGAPFFLYLLRRDN >gi|292596541|gb|ADCV01000007.1| GENE 33 32914 - 33579 1250 221 aa, chain - ## HITS:1 COG:FN0970 KEGG:ns NR:ns ## COG: FN0970 COG2082 # Protein_GI_number: 19704305 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin isomerase # Organism: Fusobacterium nucleatum # 1 209 4 214 219 164 44.0 1e-40 MDYVKNPKAIEDKSMEIIYDYVKDLGLTDDEVRVVSRTVHASGDVEYAQLVKMSPDAVQK GIEALDNGADIYTDVEMVRTGISKPALKIRGNEVHCLIKDENVAKMAKELGVTRSIAAMR TFGKQLEGQIVAIGNAPTALYEVLRLALEEGIKPALIIGIPVGFVGAAESKDYLMEVSPV PYITVKGNKGGSPIAASVCNALLYTDVKRNDMLFVEGKESK >gi|292596541|gb|ADCV01000007.1| GENE 34 33566 - 34354 950 262 aa, chain - ## HITS:1 COG:lin1163 KEGG:ns NR:ns ## COG: lin1163 COG2099 # Protein_GI_number: 16800232 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6x reductase # Organism: Listeria innocua # 1 238 1 228 250 144 37.0 1e-34 MIWVIAGTLDGRTLAVDIQERTGEEVLVTVVSQYGAELAAHKGITVHTGRLDQEAMQNLI KKHNVRLLIDASHPYAAIVTATAQDAAKAEGIPFVRFERKEVPLPDYDKLHIVVDEVEAA NLAGKLAKENNKHVYLTTGSKTMHIFAKSEALQDCEVWTRILPTAEVLQMMEDLNVSPKR IVAVQGPFSYDMNRIMFHDTQASVVVMKNSGLVGGADTKLQAAMDLGIHVIVIDRPRVKL ESHVVSSNDEFFKLWEDTNGLR >gi|292596541|gb|ADCV01000007.1| GENE 35 34351 - 35175 1175 274 aa, chain - ## HITS:1 COG:lin1162 KEGG:ns NR:ns ## COG: lin1162 COG1010 # Protein_GI_number: 16800231 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-3B methylase # Organism: Listeria innocua # 33 274 2 241 241 267 55.0 2e-71 MRDNGITSGQEPNTNTAQNNLSQNNGSHCTGNIKVIGIGPGDEEFMTPQAREAILAADRV VGYLTYLDLIKDLIEGKETVGTAMMQEVDRCQQAVDLAVEGHQVVVVSSGDSGVYGMAGL VLELANKVPAEKRPSVDIVPGLSAVNVAASVLGAPLMHDFAVISLSDLMTPWDLIKKRAD LCAQGDMVISLYNPRSKKRVTHLDEVREIVLKYRDPKTPVGIVQKAGRPGQHMVISDLEN FTNEEVDMQTLVIIGNSQTYVENGRMITPRGYKL >gi|292596541|gb|ADCV01000007.1| GENE 36 35070 - 36215 1007 381 aa, chain - ## HITS:1 COG:STM2028 KEGG:ns NR:ns ## COG: STM2028 COG2073 # Protein_GI_number: 16765358 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiG # Organism: Salmonella typhimurium LT2 # 10 361 1 334 351 164 33.0 3e-40 MKELETGAPMTGAKKNRTAILSVSERGAKLGQRIKSLVAPHADCFEKENRSSGGEAIYFD SLKNHIGQIFKDYDQVLCIMALGIVVRMIAPYIEHKSKDPAVVVMDEVGHHVISLLSGHL GGANEWTQSISLAIDADPVITTATDVNGLPAPDVLARHEHLLVDDFQTLINVNSAIVGGE RVDYYIDASLENADHLEEATKAYIGEHGIVHVVSLEQLDSIPCKNESAEEGASRVVITDK VMTEYGHQLILRPRTYTMGIGCRRDTPKELILDAIQQSLTAHQLSPKSLVTAASVIVKQD EVGLLEAMQIMGWPIVFYTQEEMAPLIEEEELKESNFVKGTIGVGNVCETTALLAAKSRT LIQHKTIYPKTTVAIAQVTSK >gi|292596541|gb|ADCV01000007.1| GENE 37 36220 - 36981 1028 253 aa, chain - ## HITS:1 COG:MJ1578 KEGG:ns NR:ns ## COG: MJ1578 COG2875 # Protein_GI_number: 15669774 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-4 methylase # Organism: Methanococcus jannaschii # 4 251 7 255 259 303 63.0 2e-82 MVDVHIVGAGPGDPELITRKGYRLVQEADVVIYAGSLVNPAILEACKPGCEIHNSATMNL DEVLAVMKAAVEAGKRVVRLHTGDPAIYGAIQEQMDALAGMGISYEVVPGVSSFLATAAA LKQEYTLPNVSQTVIITRMEGRTPMPPKEKLRMLASHEATMCIFLSVQMLDKVVAELIEG GYDKTTPVAIVVKASWPDQRIIRGTLETIADIVAKEGVLRQAMIVVSHVLDSEYELSKLY DKGFAHMYRSAKD >gi|292596541|gb|ADCV01000007.1| GENE 38 36983 - 37570 699 195 aa, chain - ## HITS:1 COG:CAC1378 KEGG:ns NR:ns ## COG: CAC1378 COG2242 # Protein_GI_number: 15894657 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 2 # Organism: Clostridium acetobutylicum # 7 194 4 187 187 128 41.0 5e-30 MRHFFGIPDEEFIRGDVPMTKCEIRKAVMNEARIEEDSIVLDVGAGTGSISIEAALAAPK GHVYAIERFDKGIDLINENIKKFNVNNMTVIKSKAPEGMEELPELDAVIIGGSAGGMTGI MDEAQRLLKVGGRLVVTAVTMETGYTILKELKGRPFTYEGYQMSISRYRKAGPYHLLDPL SPIFIVSATRIAEGE >gi|292596541|gb|ADCV01000007.1| GENE 39 37567 - 38193 603 208 aa, chain - ## HITS:1 COG:MTH1514 KEGG:ns NR:ns ## COG: MTH1514 COG2241 # Protein_GI_number: 15679511 # Func_class: H Coenzyme transport and metabolism # Function: Precorrin-6B methylase 1 # Organism: Methanothermobacter thermautotrophicus # 4 207 2 207 207 116 37.0 3e-26 MAHTLYIVGIGPGNPDYVVPRGLNLIKHATVLVGSERSLEDFQEPGQITYPVTGKLSLLA EQIEQELKSHDVVVMVSGDTGYYSLLPYLKKKFTANPIEVVPGISSMTFAFARLNEVWHD ADLMSFHGRQPAPEKLVYEVGKKMGFLTDPEYNPAHIARILIDAGWPKETRAAALERLSY DDEKIVDSTLEVLTELEGFGHSVMVVLG >gi|292596541|gb|ADCV01000007.1| GENE 40 38169 - 39287 1105 372 aa, chain - ## HITS:1 COG:MJ0022 KEGG:ns NR:ns ## COG: MJ0022 COG1903 # Protein_GI_number: 15668193 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiD # Organism: Methanococcus jannaschii # 7 352 10 355 362 251 43.0 2e-66 MKVEDMKGGYTTGSCATAGMKAGLLALLDKNIVDQVVIENPQGQYIEVPIKAVEIISDTE AKVTVMKDGGDDPDVTHGNDVETTVSLDNTGELRFRAGFGVGTVTKPGLAMPPGEPAINP GPRAMMKIVFEEHCVHGQGVTVTVSVPNGKVLAKKTLNHTLGIEGGISIIGTTGIVKPMS EEGFKNSLVPQLKVMKANGCETAVLVPGRIGQDLAEQVLGIHKNQMAETSNFIGFMLEKA VQIGFKRILIIGHIGKLIKLASGSFHTHNRMSDGRMESIVAYAALEGASQAVCEELFNCQ TTESTFPILEREGLTGVYQRVVDRASLRSERYIANEAEVGIIITTLKGEILAMDKHAKEI GELEHWHIPCIS >gi|292596541|gb|ADCV01000007.1| GENE 41 39358 - 39852 714 164 aa, chain - ## HITS:1 COG:BH2387 KEGG:ns NR:ns ## COG: BH2387 COG1666 # Protein_GI_number: 15614950 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 163 1 164 164 155 55.0 2e-38 MAKDCSFDVVSEVDMQEVDNAVNQAKKEIGTRYDFRGSKAEISLEGDTIKIIGDDEYKLN AIIDVLKGKMVKRNVAIKNLDYGKVEPAAGATVRQIITIKKGITKENAKEVVKAIKNMKI KVQASIQEDQVRVSGKDKDDLQAVIQMLKQLDIPVELQFVNFRS >gi|292596541|gb|ADCV01000007.1| GENE 42 40260 - 41855 1872 531 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1148 NR:ns ## KEGG: Vpar_1148 # Name: not_defined # Def: KWG repeat protein # Organism: V.parvula # Pathway: not_defined # 1 531 1 531 531 902 98.0 0 MNINKKSVLVACVLAAMSTTTFAASTTTSTSSTTVTNQDTPTSTSTRVTREEHTTTTSTS TVRTESSSSSKSTKASVGVMTPQKLEERSALSGYIAADVASALNPYRNAPKSLKSGKGTT FKNDEVLEHGVLAAMKQGGKWGVIRPDGTVAIEPKYKEIKDVDYKTGNVLAQVDKKTDTW VTPKGVEISEEEALKERVKQEATQEYASDSYVEFKEKGKYGFKTTDDKVVIAPQFRQIVT GFSEDRAFVKNAKGKIVAIDGTGKELFNAPSKEVYRYRNGLAEYRRSVSGFNLGGLVGGF IVGGILGGALLGGQHYHVGGFAYDGAKRGYIDRSGNIVIDSKKDKVWPITAYGTVIKDAG NLYFVNRKGEVVIQPGDYDAGEMDKLNGLLALRDNKTEKWGIFDVSTGKQVVTFKYDSIS FAGTDRLVVVKDHVKNLIDMNSGKSLYSAQTEATIEPFNNDTVTWVHTGKEGYTIIDNNG HILFRDTNKLIEDAKSFNHGFSSVKSKGKWGIMNSKGEWLVQPTYDAVNVL >gi|292596541|gb|ADCV01000007.1| GENE 43 42082 - 43047 268 321 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 20 314 18 281 285 107 30 4e-22 MKTATIIDLIVDSGVHTQSINHVIKQQHISQRMRRRLRNEGIITVNGKFATWNTLIHGGD HLVMKLTPEQEFSLSPMSLDIIYEDEYILVINKAAGILMHPTSTVRNHTLANGVLHYYQE TNQHYDFHPVHRLDKNTSGIVIIAKTSVVQHAFDKKHTHFYKIYDAIVEGHLPSVRISIN WPIGRKPDSIIERCCTDQGKPARTDITVVSKNTSKFNYSKNNSDDMINNSNICPADNSII VYNHFTHVQCLLHTGRTHQIRVHLSQLGYPLAGDDLYGGHLEFIQRQALHASHVSFYHPI TNEWLELHAEMPEDMNVLLND >gi|292596541|gb|ADCV01000007.1| GENE 44 43296 - 44225 1335 309 aa, chain + ## HITS:1 COG:TP0662 KEGG:ns NR:ns ## COG: TP0662 COG0191 # Protein_GI_number: 15639649 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Treponema pallidum # 3 308 9 331 332 318 52.0 8e-87 MPLVTTTEMFKKAYEGGYAVGAFNVNNMEIVQGIVDAAKEEQSPLILQVSAGARKYAKHI YLVKLVEAALEDSNLPIALHLDHGDSFEICKDCVDGGFTSVMIDASHHDFDENVKITKQV VEYAHAHGVVVEAELGRLAGVEDDVNVSDADARFTDPEQAAEFVHLTGVDSLAIAIGTSH GAYKFKGNPYLDFDRLKKVGELLPNFPIVLHGASSVLPEFVAKCNEFGGNIPGAQGVPEK MLRKAAQMAVCKINIDTDLRLAMTASVREYLAQNPSEFDPRKYLGPARDAIKGMVAHKIK NVLGSSNKL >gi|292596541|gb|ADCV01000007.1| GENE 45 44229 - 45785 1573 518 aa, chain + ## HITS:1 COG:CAC3213 KEGG:ns NR:ns ## COG: CAC3213 COG2244 # Protein_GI_number: 15896460 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Clostridium acetobutylicum # 5 499 6 496 512 224 33.0 3e-58 MTSGFLKGTLILTIAGFVVKAIGSINWILLSRILGGEGIGIYQMAFPIYLLLLQISSAGV PIAISILTAERLALHDFGGAKRVFNISFTMLTITGFIASLAMYFGADWLISSGLIAESRA YYSIIALAPAVFFVTWISCFRGYIQGYEMMTPTAISQIVEQLLRVIVMLGAAAILLPYGL PAAAGGASLGAGVGAFGAFLVLLYYYYKLPKASSTGESYDGPRESAKEILSRLLTLSIPI SLASIMLPLTANLDLLIVPRRLLDAGFPMNEVTELFGYLTGMAVPLINLATIITAALATS IVPAISHAFAKRDHQGIYDRTAGSMRLTFMATVPFTVLLYVLAAPTVTLIYNAPKAELAT QITAFSIFFLGVHQVTTGILQGLNRPRIPVINMGISLIIKVILNWTLTAIPWLGIGGAAW ATVADIGFAALLNLIYIKKYTGYFLDISLLWKNVVSAGVMGILIFLSYHYLTDILPMWAN FILTGIEGLLLYVIIMVLLKGLNKNDGASMPLVGRFFR >gi|292596541|gb|ADCV01000007.1| GENE 46 45882 - 46925 630 347 aa, chain - ## HITS:1 COG:MTH1382 KEGG:ns NR:ns ## COG: MTH1382 COG0679 # Protein_GI_number: 15679381 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Methanothermobacter thermautotrophicus # 1 335 1 297 302 65 22.0 1e-10 MVFLTSLQSIIPIVLLILLGYILKGRGMFNPTFSGNLSRFIMSVALPAGVFVSVLHHLHT SDIWNLRYGMLVVVLTYVIAYIVAFIMMKMLKVPKGRRGIFINMVVNDNCLFIGLPVQIA LFGQDALPYFLLYYIGNTISVWMVGVFLIELDPLPNSEVDFNNGSHKIDSINNRLVSTKG KSKKPKFDWKKLLPPPLIGFFVALIFLFFEIPLLPILHTTLNYLGDMVTPLSLIYIGIVL HDAGLKSMRLNKDSIGGIVGRFVISPIIMFCLITALQYGAGIVLEPIAIITFVVQSAGPV IAVLPIVANESKADLPFATGLVMISTILFVVVIPIIMEILTMIGIQA >gi|292596541|gb|ADCV01000007.1| GENE 47 47147 - 47887 859 246 aa, chain + ## HITS:1 COG:FN0505 KEGG:ns NR:ns ## COG: FN0505 COG2071 # Protein_GI_number: 19703840 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferases # Organism: Fusobacterium nucleatum # 3 241 4 241 243 220 43.0 2e-57 MTKPFIGISGNILRDNGGPYVDLLRSYVNQDYPRSIEETGGIPVIIPFTQNLDVARETVA KLDGLLLSGGHDVYPLHYGEEPLQGLGDVFPERDQFDFALIKAAEEKQIPIFCICRGLQI LNVYRGGSLFQDLKYDQNCTIKHSQNQTPSLGTHTVDIESKSKLAGAIGCNTWITNSHHH QTVKSVGKGLHVVAKAKDGTVEGLEDPSYPWLVACQFHPEMMSTNDENAKRVFTAFVKAT QENVTK >gi|292596541|gb|ADCV01000007.1| GENE 48 47903 - 49210 1655 435 aa, chain + ## HITS:1 COG:SPy2088 KEGG:ns NR:ns ## COG: SPy2088 COG0531 # Protein_GI_number: 15675845 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Streptococcus pyogenes M1 GAS # 2 418 11 429 447 269 39.0 6e-72 MKETGKFGFWSIVLLGINGIVGTGIFLLPNKAYSIIGSASLGVLLFDAVIAGCIALCFAE AASLFTRNGGPYLYAKHALGDFWAFEVGVLKWIVTVIAWAAMAVGFATALGAAVPALSGD FAKDVISFILIVGLTIVNIFGVNVSKFVNNLITISKLVPLALFIAIGIFFINGANFTPVF PQDIYVDGSFAQAAVLLFFAYTGFEVIAIAAEDMKNPKKNLPRAIIMCMLLVSILYMAIL AVSIGVLGTDLANTKAPVQDAFNVIVGPIGMYIVLVGTLISMGGINFAEAYYAPRVATSM AEDGMLPSALVKRNRYNAPYIAAIVTAIASVLLAWSGSFTTLAAISAVSRFTQYLPTCLA VIIFRRKWADKARSYTIPGGYLIPVIAIGTSLWMLAQAQTNQLLWGLGGCIVILPFYYSY WKKKKAGLIKDHDEM >gi|292596541|gb|ADCV01000007.1| GENE 49 49361 - 50200 1110 279 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1155 NR:ns ## KEGG: Vpar_1155 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 279 1 279 279 450 89.0 1e-125 MTEIQALLLIKSILESADIHGIEHMLSEDCEYLSTGRGIIGRNRNETVEFLSSMTESIKA DNVSVTCKVMHITDVYEEDALFHEGRHGLTVSYENNDNYVYMIFVDVNDKGLVDRIVSSQ ENYSIEYDDLRFGADESEYAFISAPATVKDWITALSMWLETANVDIDDFYQYIDEDTRVV FQKGDAESITLESGLDVEDYFDQLMNQHFDAVPHIIRDEEDGLILTYGPMSAIATLNEEG ALVLISIYIDTRDEDEATDEVGYIEEDLTKETIIEEALY >gi|292596541|gb|ADCV01000007.1| GENE 50 50340 - 50999 741 219 aa, chain + ## HITS:1 COG:BB0676 KEGG:ns NR:ns ## COG: BB0676 COG0546 # Protein_GI_number: 15595021 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Borrelia burgdorferi # 1 215 1 220 220 114 32.0 2e-25 MKYTTIVFDCDGTLLNTATDLANAVNHVLRTHNFPEKSLAEIKAALGNAVTYLMRQCLPS TVADHELEPYIEEFKAYYGKHLKDTTAPYPDILDMLDVLREKGYKLAIVSNKIQEGVTPL NKEYFGDRLPVAIGERPGLQRKPAPDMVLQALKELRSTPEESIYVGDSEVDVATAKNSGL LCIGVTWGFREESLHQELGVTHIARKADDILSIIETLNK >gi|292596541|gb|ADCV01000007.1| GENE 51 51445 - 52056 951 203 aa, chain + ## HITS:1 COG:MA4008 KEGG:ns NR:ns ## COG: MA4008 COG1584 # Protein_GI_number: 20092803 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 5 198 11 201 201 69 25.0 3e-12 MENEVRKVEMSENVADPTGLGLLGLAVVCFVVSTSRVGWSGPTTSVFIPWAVLLGSLAQL MASYFDFKRNNAFGSVVFGAYGLFWSAMTGIWLIQMGAFGPEIQKGFDVTQLAFAFVGFL IFSIFGTIASLKTNKVVFAIMLLICFLFFGLSTDLFLGGRTGFFALVAWSELFISLLGFY GSGAVLVNKVFGKTVFPMGKSIL >gi|292596541|gb|ADCV01000007.1| GENE 52 52211 - 54478 2416 755 aa, chain - ## HITS:1 COG:XF1529 KEGG:ns NR:ns ## COG: XF1529 COG5295 # Protein_GI_number: 15838130 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 510 607 202 300 2059 74 49.0 6e-13 MEKKMGQQPSRYKALLTAVLVTSTCGCLWGSPVYGETPVTDGNGNEYLASDNTNITGKKN TVTSGKNATIVGDNNTISKTFPNEKGKPVNSMGSEDVRIVGSNNTVQGSRRQHVIGDNNT LIARDKGTVTDYKHKTGRESNTSDLTIGRGNFLRGNDTYRNEWDSLTVIGNNNKAEYSVE SAGGPAAGIVIGDNQNLDTIRDSVVIGSMSPAEQAEKSESDPRDKKYTVGRSSTIIGYHS ANSSGGSVVIGNHSKANSIFQTLTGHGSVIEGGTEMSRSSGAFSSSYGSFNSIESTSTEN DEADSIGNTITGSLNRASGSTGTMIVGSGNEVTNSKASVIPLPELGTTLGNFYLESAEIA GMDKINGNHEGTVEAGRKNMKAYMAGHAGAVSILGNSNSVDYTMRSQISGTNNALKGQEG HMNVYNNMSGYGNEGSNISRTTIVGTGNSLKNGEDNVVIGDFHKLDGGKHNVVLGSMASE EKEVTKTLKNSWDGSETKYTVKEIVPTRRNTANIENAVMLGYNTDVKNNGGVALGSDSVA SRDKGIAGYDPSRNATSTEGSPTWKSTAAALSVGDSTGNTVLTRQITNVAAGSEDTDAVN VAQLKRIATESASTMEHRFSQVDTHINQVDSRVKRVGAGAAALAALHPQEFDPYDKWNIA AGYGNYRGANAMALGIFYRPNSKALFSVGGSFGGGEDLLNLGVSLKFGKGNPYAEYSKAG LIKVINDQDEKLKQQDEKINTMQEQINKMMAKLDL >gi|292596541|gb|ADCV01000007.1| GENE 53 55119 - 55703 775 194 aa, chain + ## HITS:1 COG:MA4008 KEGG:ns NR:ns ## COG: MA4008 COG1584 # Protein_GI_number: 20092803 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanosarcina acetivorans str.C2A # 6 189 21 201 201 69 27.0 4e-12 MSENVADPTGLGLLGLAVVCFVVSTSRVGWSGPTTSVFIPWAVLLGSLGQIIASYFDFKK NNAFGSVVFGAYGLFWSTMAGVWLIQMGAFGAELQKGFDVTQLAFAFLGFLIFSIFGTIA SLKTNKVVFTIMVLICFLFFGLSTDLFLGGRTGFFALTAWSELFISLLGFYGSGAVLVNK VFGKTIFPMGKSIL >gi|292596541|gb|ADCV01000007.1| GENE 54 55874 - 56470 522 198 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1158 NR:ns ## KEGG: Vpar_1158 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 198 1 198 198 343 81.0 2e-93 MKHCITLLSLGLCLVSPLLSQASDIKPLIHVTNVHNGQYDEALDAITDTKIYGPYQFRVL KDAIETQGETKDINGRVFRTSDGVFMHVKARSVDNGSTSLDKEVKKIIKDRTIPEPTVKM VLPVKHDVIEVNNDGVRSLFMEFMYGWPLEYRTDMVLVTDYGDTRYYYNLQFYRHKLPKG IRIEQLRQMIMDAQFSHK >gi|292596541|gb|ADCV01000007.1| GENE 55 57099 - 58310 1271 403 aa, chain + ## HITS:1 COG:BH2528 KEGG:ns NR:ns ## COG: BH2528 COG0477 # Protein_GI_number: 15615091 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 2 395 5 403 419 338 50.0 1e-92 MRNRWFIALAAIGLHISIGSVYAWSVLTRPIMVDMGFTLSQTTWTFSLAILMLGLSAGFL GSFAEKIGPKKSGLLAMLFWVTGLFGTAYALSIHNLTLLYLFYGIIGGIGLGIGYITPVS TLVKYFPNRPGFATGLAIMGFGFASLIAGPLMQYLVAQVGLVDNFIILGIIYLVVMGASS LYLKAPQQKHLTRTTKDKSTMYVHNHGMLANDAMKTWQFSALWWIFFVNITCGIGLLSLA SPMAQETIGMTPAAAASLVGIIGIFNGGGRIAWSTISDYLGRAQTYILFFIIEIVAFHLL AQTNSALTFQILILLIITCYGGGFSCMPAYLADLYGIRQLSTIHGRILTAWGLAGIVGPM LVSYFHEAGYGYTTALVCFALLFVLNTIIAIILKIYGKRGLHN >gi|292596541|gb|ADCV01000007.1| GENE 56 58625 - 58702 72 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTFKVLSLIISFGILVATIIMAAK >gi|292596541|gb|ADCV01000007.1| GENE 57 58951 - 59541 480 196 aa, chain - ## HITS:1 COG:SA0089 KEGG:ns NR:ns ## COG: SA0089 COG1112 # Protein_GI_number: 15925797 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Staphylococcus aureus N315 # 1 173 868 1033 1050 80 31.0 1e-15 MFTVANELSYGGFMINKTMSPKEPIDPCKESCWITYDASNIESTTGKDRYIQVQGQIAFE LIQKLRAGNVKFKDIFIITPFTTVAYGFKKYMEFISDDIVNWTDKDNKSGWLKDNIGTVH TFQGKEAKIVIYMLGCQSDGSANGAIKWVNANNVNVAFTRAKEYVYVIGDATKWAELNKN LAFAQRYLPVYTLEDI >gi|292596541|gb|ADCV01000007.1| GENE 58 59643 - 62288 1892 881 aa, chain - ## HITS:1 COG:SA0089 KEGG:ns NR:ns ## COG: SA0089 COG1112 # Protein_GI_number: 15925797 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases and helicase subunits # Organism: Staphylococcus aureus N315 # 239 878 203 821 1050 166 29.0 3e-40 MKDTAKQIIKYWYSLECLQPKEVPKYKAIPKKYVNELVFTTENDTTTIYQQSVIKPYWKR TNSRVSTYVVPLPNDSYNYSITDEIKYFKDEKDYVLDDEHAVLLCVVKGTEVLEAFIDKL EIEYPEKPYLGNVYSASFVVDAEGYYKEGSLQIAPFIWVIYQMMSQPDVEFKDIKLDGWH EIVKSIEDSFNLPEEKVSLDNAARVINTYLREHILEPMGITMFRAGDIYGYCGFQAEEIQ LVKAETMPINDLKSSFFLDDLQLVLQHIDTLKDKDKLLSYINSLNQDIEHYDLLKDTDQM RKWYNPKVLPYGRWPSKFNLSFMQQIAVNIAKGNPKDIFSVNGPPGTGKTTLLKDIIASN IVERAAKFCESNNVNDIFKKVMGRDGTSFYYDIPSDIALYGMLVLSSNNKAVENITLELP NISSVEEGTNGSTLFHPDSSNQQVDLSYFVKDKKYQFVKSNEVYFTFLADRLAESNEQWG LISARLGKKSNINTFMPVLDALSSDMSSIMRMPSAQDAFESAKKQFQAQHNLVKALFTYV TAYEENIHLIQELKGKIDKLKEEVLVINEQLSKYDDLDDNLLKLIERKNSIESKLIGLNS KRSIIDKIWSATNWSILEAMSNAALLSVIEDETTKLQNVKGELDALHQLVNERESIINTK DGLLADIKGLDNTLQKIEETQQDILGILKTDNKDTIHCFDDIVSNLMSLHEDRAESHTAF LYMCNYLNECRERLLYDALQLQKAVVVSDAFRKNMQLLSQYWGSLNDRKNLQKNFDLDAI FPALLNSLMIAVPVISSTFAAVERFLINCKSESSLGTIIIDEAGQASPHMLVGALFRAQK AIVVGDPKQIEPVQTVQDLFVEKLVAKVLENIGVKSYLYKV >gi|292596541|gb|ADCV01000007.1| GENE 59 62451 - 62870 254 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294793949|ref|ZP_06759086.1| ## NR: gi|294793949|ref|ZP_06759086.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 139 1 139 139 228 100.0 7e-59 MSGTEFRLKVSELEVKLSEIGLSLIKEYASGGLKALLLLNGAAGIAILAFLGNILGTEFE RWIRGIAWGLVFFSIGAFFSTISWLFAYISQTYYNEANGNDKMIKNGTIWRNTTIITVVV SGIAFLVGGFLIFYVITSY >gi|292596541|gb|ADCV01000007.1| GENE 60 63239 - 63442 65 67 aa, chain + ## HITS:1 COG:no KEGG:lwe0481 NR:ns ## KEGG: lwe0481 # Name: not_defined # Def: type I restriction endonuclease S subunit # Organism: L.welshimeri # Pathway: not_defined # 1 67 119 185 392 89 61.0 5e-17 MDPTFLALTISNGEQQKELSKRAQGKSVVHLHNSDLQEVNLTFPLLNEQKEISTLFEKMD SIITLHQ >gi|292596541|gb|ADCV01000007.1| GENE 61 63466 - 64425 421 319 aa, chain - ## HITS:1 COG:lin0524 KEGG:ns NR:ns ## COG: lin0524 COG0582 # Protein_GI_number: 16799599 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 16 318 5 308 309 382 62.0 1e-106 MWEQRKWWGRIMLTIEEKSELFYIYYEKWIRIYKEGAIRNVTMRKYEITLLWLKKLVPEL KLSQLNRISYQQLLNDYAEFHERQTTMDFHHQIKAAILDAVDEGFIDRDPTRKAIIKGRS PRIKKIKYLNQFELHTLLVNLKLTSEINWDWLILIIAKTGMRFSEALALTPKDFDFSHQS LIVDKTWDYKGNGGFLPTKNRSSVRKIQLDWQTIIKFSELIKGLPEDKPIFVKGRVFNST INGVLERYCKKLGIPVISIHGLRHTHASLLLFAGVSIASVARRLGHASMTTTQKTYIHII QEMENRDIDLVMRSMAGLA >gi|292596541|gb|ADCV01000007.1| GENE 62 64386 - 64778 261 130 aa, chain - ## HITS:1 COG:no KEGG:Lm4b_00547b NR:ns ## KEGG: Lm4b_00547b # Name: not_defined # Def: specificity determinant HsdS # Organism: L.monocytogenes_Clip81459 # Pathway: not_defined # 1 115 269 383 400 157 63.0 1e-37 MKKGDIAFEGHPNNEFKFGRFVLNDIGTGIISELFPIYRPITEYDLDFWKYAIQLERVMA PILAKSITSSGNSSNKLDHNHFLNKELLVPNIEEQKKIGTLLSLLSKNITLHQQEPFLCG NSVNGGVELC >gi|292596541|gb|ADCV01000007.1| GENE 63 65060 - 68194 2111 1044 aa, chain - ## HITS:1 COG:SPy1904 KEGG:ns NR:ns ## COG: SPy1904 COG0610 # Protein_GI_number: 15675717 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Streptococcus pyogenes M1 GAS # 5 910 3 848 992 513 37.0 1e-145 MGKLNNTKEAQLEQNLIDLLCAQHGQWTFRSDLKTEEDLWNNLRNIIEIRNKSELNDNML TDSEFKRIRSEILANTKTPFEAAKWLRGEKGKCSVVLERDNGLGRIELIIYSSIEKNGGF SSYEIVHQIAKNKSNLEERSRRFDITLLIGGLPIIQIELKTAIAKDGVKQAYYQIEKYID EGTFSNTIFQTLQLYVMSNEQTTRYMAAAPKGELQEKFMFGWRTRDNTRVENINEFAKQV LNIPRAHELVSEYMILSEEVSSKILMVLHPYQIHAIEAIFEAASKHQSGYIWHATGSGKT ITSFVSTKLLAQKSGIDRTIMLLDRKDLDNQTTSEFTKFASAYSTGVNTNKNTLIVGTGN TKELSNALKQDSSSNVVIVTTRQKLNKAVEYLQEKEPGRLANLRGKHIVFIVDECHRAIS AQNMDDIKKVFPKSTWFGFTGTPIFEENKKSSDGQYARTTHDQYGEVLHRYTIKNALEDG SVLGFQVEHESTIHQDELANVVYRAMRSEEKNINYTDEELVSTIESMKDIDKEQYLQSTH YESDDHIQSVIRKILSPNNAYSKFVFKDGKPTMSAILTTSSIDMAKRYYKAIKKFTAHKN WLETQFPNNPLRQGAVMNDPDFPRVAITYSLEENTKDSALKETEMAEIIDEYNQMFGTSW SIESINRYNGDINNRLARKKGEFKEFGKHLDLVIVVDRLLTGFDAPRCQTLFVDRNLQYA GLIQAFSRTNRTYKGKDKGLITTFRKPATMKEHVYAATRLYSQTNNNSSLIYPTYEESKK KFNAAYTALVKLEAINSNNPITEYAPVSDRINFVKCFQDLNKAYRAIASYDDFNIELDND KHGTFSKKIAIIEDNIGLYNTIKASLKPDDKNEPGIELIDFFDSSTVQTYTVDKSYIDAL LSEYEANSQDTRAKIEDALTKLNKSESVRTIYKHILDDIDTQVIDKDSNLLKIKREYFTK AYDSIVESFASTWCVNQDELMVSVNQSTLGEDIYNKNRIVGSANYPVYVQQHPDSDPFSY PQHMIEAWEVCLSDEVIPLRDELK >gi|292596541|gb|ADCV01000007.1| GENE 64 68213 - 69451 601 412 aa, chain - ## HITS:1 COG:L0310 KEGG:ns NR:ns ## COG: L0310 COG0732 # Protein_GI_number: 15672634 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Lactococcus lactis # 5 412 8 407 407 143 30.0 6e-34 MANKPRIRFRGFTEDWEQRKLESLFTKYEDKVNTPDSGYWRLGLRSHCKGTFHTYVDAGH ELETTEMYRVKAGNFILNITFAWERALAVTDDEDQDKLVSHRFPQFKPNSDLVIDFFKHT LMDKRLKHHLELSSPGGAGRNKVLKVSDMLKYELLVPSIQEQNIISSFLNNIDHIITLHQ CKLKKLNLAKKSLLQKLFPRNGSQIPGVRFKGFTDAWEQRKFLDLLDTQNGIRRGPFGSS LKKDSFVKKSDYVVYEQQNAIYDNYVTRYFISKEKYNELIRFNIQPGDFIMSGAGTIGRI SMVPDGIKKGVFNQALIRFKVDKNSVNPLYFLKFMQSDMMQKQLTQANPGSAMTNLVPMD ELKKWDVTIPSLEEQNKISNFINQIDESITLHQRKLERLQEVKKGLLQKMFV >gi|292596541|gb|ADCV01000007.1| GENE 65 69441 - 71036 1461 531 aa, chain - ## HITS:1 COG:SPy1906 KEGG:ns NR:ns ## COG: SPy1906 COG0286 # Protein_GI_number: 15675719 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pyogenes M1 GAS # 5 521 8 522 526 553 56.0 1e-157 MGAELNQKLFSAADSLRGKMSADQYKDYLLGLIFYKYLSDKLLESTVVKAYKSLDEYDTV AKQTELYKSYILNDKSKAFFIATMSDTLGYHIEPQYLFSELANSVKDNSFELVHLRNAFV RLETAYKQFEGLFDDIDLDSKQLGVDANQRNITISEVIKKLDEVDVLGHDGDVIGDAYEY LIGEFAAGSGKKAGEFYTPQQVSNMMAQIVTIGQEDTPSFTVYDPTMGSGSLMLNVRKYL NNPDRVQYHGQELNVTTYNLARMNLILHEVNAEDQRLHNGDTLNKDWPTDEPYMFDSVVM NPPYSAKWSADPTFMDDARFNRYGKLAPKSKADFAFLLHGFYHLKTSGTMAIVLPHGVLF RGAAEGIIRKKLLEDGSIYAVIGMPANLFFGTSIPTTVIILKKNRPGRDVLFIDASNNFT KFKNQNKLEPEHIKRIVDTYKNRESIEKYSYLAPFKEIKENDFNLNIPRYVDTFEEEAPI DMVVLGKEMKAIKEEEAKLEKEIYDMLLQLDCTDEDKDWLNGVLEVFNYGK >gi|292596541|gb|ADCV01000007.1| GENE 66 71219 - 72436 851 405 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1162 NR:ns ## KEGG: Vpar_1162 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 396 1 432 443 318 43.0 2e-85 MKRVLMAALCLSCVTLGSHAIDINIPGADPTVAKDAYQNYRKTGNEVQKTENIIANQIRD EYNNNGSKKWTLDELLYFTKELYHSTKQSSSVFILKDNGANIKFTVPESSQFGKTIKGDP LTTEVQKGNFRLIEGNIHYTIRKSGESQVKENSFSYPTVRNATWEIGQTKSGALEGAINF GVKSDPSLSYHISYDLIKKKELELLKTHDQQYVYKELMSPLVNYVLPSIEPAKQILSKTK PITINGFTFQTLKSSDLVYHGPDNDSIYIYDGKKYREGIMVRELKPEELANRHQINYKLI RFFIMYKPYSDFKPIQYATVWNDATPAIYMEVERSKSRMYIQSLYDDKYLYTHFIMADLD YKTPSKDLRDIVQYVDNANDKDKYAKSQAGMGAIPKGIYENSSVK >gi|292596541|gb|ADCV01000007.1| GENE 67 72553 - 72789 229 78 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1163 NR:ns ## KEGG: Vpar_1163 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 78 1 89 89 65 59.0 5e-10 MKFTKRILIMTALAVTAVVSTGFAYDYVCNNSQYNCNTNTQYNSDNNTNNTNYAPGTNNN QNYCGPNSNTRGCGGFRR >gi|292596541|gb|ADCV01000007.1| GENE 68 72912 - 73553 589 213 aa, chain - ## HITS:1 COG:no KEGG:Acfer_0381 NR:ns ## KEGG: Acfer_0381 # Name: not_defined # Def: hypothetical protein # Organism: A.fermentans # Pathway: not_defined # 3 212 1 203 206 84 27.0 2e-15 MGIFKKLCMTSMLGVMLTVPTYATVVTGSQSDVNLDLKYPLVYTEHAYAQRVINTDIANY VLEAKDMYYNQHIYQVSQNYKVTYEDSQVVSILLTTYYYYAGAAHGMYNTRGLVYNKVTG QRIPLYNYIKIANAAQLDNGLRSHVLSYYTGNHIKSYIPSGWSVKYVTDNYCLRGKGNID LVYQPYELGPYAAGNTYIGFTPKAIEYFNRMNS >gi|292596541|gb|ADCV01000007.1| GENE 69 73821 - 74375 445 184 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1166 NR:ns ## KEGG: Vpar_1166 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 184 1 184 184 328 97.0 6e-89 MKKLFSMLLLACIVIPLQIQAISMEAIKNDKNNVPIITGKNAITYFVDKSSIKRIEENQF IYKAQAVVYEVENNNSRRTNSYIHKVLVTYRYDINHSVASVLRTPQYAQDYSLLIYAKQA SSGMKLTINSVEDFNYEGVALGNFSNIPEQYVDVALRDPKYVVGNYIFKEAYGTAFENMT LHKK >gi|292596541|gb|ADCV01000007.1| GENE 70 74517 - 74867 568 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372290|ref|ZP_03855772.1| LSU ribosomal protein L20P [Veillonella parvula DSM 2008] # 1 116 1 116 116 223 99 7e-57 MARVKKGVTAHARHKKILKLAKGYRGTRSRLFKKANETVMKALYYARRDRRAKKREFRQL WIARINAAARINGTTYSRFIAGLTKAGVEVNRKMLADLAVNDAAAFAKLVEVAKNA >gi|292596541|gb|ADCV01000007.1| GENE 71 74914 - 75111 323 65 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372289|ref|ZP_03855771.1| LSU ribosomal protein L35P [Veillonella parvula DSM 2008] # 1 65 1 65 65 129 98 2e-28 MPKIKTRRAAAKRFAVTGTGEFKRAKAFKSHILEKKSPARKRNLRKATLVAKADHKRVVK CLPYA >gi|292596541|gb|ADCV01000007.1| GENE 72 75130 - 75654 424 174 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 13 174 1 164 166 167 51 3e-40 MEVNAISKDTPRINEEIRARELRVVGPENEQIGIMSGREALALAEEQHLDLVEIAPNAKP PVARIMNYGKYRYEQQKREKEAKKKQKIVTLKEVKLRPHIENHDFYVKMKNASKFLAEGN KVKVTIMFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILVSK >gi|292596541|gb|ADCV01000007.1| GENE 73 76082 - 77575 1972 497 aa, chain + ## HITS:1 COG:SA0645 KEGG:ns NR:ns ## COG: SA0645 COG0471 # Protein_GI_number: 15926367 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Staphylococcus aureus N315 # 21 496 27 516 517 357 45.0 3e-98 MSVTTSSPPQKARTTIQNIGLILAFIVLGGILLLPTPETLSTGGHRMIGVLAFAIILWMT SAVSYPVSATMITALTALLLGFSPNPEAPAKAMGTANALKLIISGYSSPAMILVGAAMFI SVAMRKTGLDRRIAMLVLSSVGTKVSRIYLGVIITGLILAFFVPSATARIACLAPIIIGI VENLGIERKSRVAALLMVGAVQADTFWNIMIQTAAAQNLVAVGFMQTQMNTSVSWIDWLT AAAPFSIIMAIITYFVTQAFIKPEIKELVGGDVQLAKMRKEIGPMSFDEKKLLCISIGLL ALWATGGKLHSIDTTTTTIIAIALFFFPKIGIMDWKFAQPNIDWGSIVMFGAGIGLGSVL LKTKAATWLAQVFVNAFSLETASVFLLIAIMAAFLILIHLGFASATALSSAMIPIVISIV MGHSAEGLNPLGVTMLMQYAICFGLVLPVNSPQGMVAYGTDTFDVKTFMTTGIPLTIIGY VMMLVFALTYWHWMGIA >gi|292596541|gb|ADCV01000007.1| GENE 74 77735 - 78322 444 195 aa, chain - ## HITS:1 COG:no KEGG:CPE0789 NR:ns ## KEGG: CPE0789 # Name: not_defined # Def: transcriptional regulator # Organism: C.perfringens # Pathway: not_defined # 60 182 20 141 147 64 34.0 2e-09 MYIYGEGVSEVARLRLREVSESEERFNRLERAVRYGKRLKLAKRVPRDVFLPEDKQLWFL FERIYTVIHDREVAVLKRFGLTPMQYNVLEFVYVSSCNPTLGFIVDELRISYGNLFEVVK NLVKKGLVNSDVCPNDKRSKCLALTYEGKILFEEVQVIHDKVLGNTFSVMCMNKKGEMKS NLSYVLRHFSQEEIY >gi|292596541|gb|ADCV01000007.1| GENE 75 79086 - 80291 1672 401 aa, chain - ## HITS:1 COG:PM0835 KEGG:ns NR:ns ## COG: PM0835 COG0477 # Protein_GI_number: 15602700 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pasteurella multocida # 4 401 5 405 405 568 78.0 1e-162 MKEVNSYGWKAVIGSSIGYAMDGFDLLILGFMLTLISGDLGLTTGQAGSLVTWTLVGAVI GGFIFGTLSDKFGRVRVLTWTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIGM ALAAEAWPAQHRAKATSYVAIGWQLGVLAAALLTPVLLPYIGWRGMFMVGIIPAFVAWFF RAKLHEPEIFVQSKEIKEHSHTNSFKLLVKDVRTTKTSIGVAILTSVQNFGYYGIMIWLP NFLSKQLGFSLTKSGLWTAVTVCGMMVGIWLFGRLADKIGRKPTFILFQVCAVASILIYS QLSDPTAMLFAGAILGASVNGMMGGYGALMAEAYPTSARATAQNVLFNIGRAVGGFSPMV VGMIISMYSYQVAIAFLAIIYVIDILATVFLIPELKGKELD >gi|292596541|gb|ADCV01000007.1| GENE 76 80450 - 82360 2757 636 aa, chain - ## HITS:1 COG:CAC2362 KEGG:ns NR:ns ## COG: CAC2362 COG0441 # Protein_GI_number: 15895629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 4 635 2 633 637 827 61.0 0 MADVKIILPDGSAKEYAAGTTLGEAVKQLSNSLAKKVLAANVNGELTDLREELVDGSEVA FLTFEDEGGKHTLRHSASHILAQAVKRLWPEAKLAIGPAIDKGFYYDIDMEHILTPEDLG KIEKEMSRIVKENLPITKSVMPRQEAIEFFKAKNEDYKVELIQDLPEDAVISCYSQGDFI DLCAGPHVASTGKVKAFKLQSIAGAYWRGDEKNKMLQRIYGTAFEKKEELDAYLHMLEEA AKRDHRKLGKELGLFVIKEEGPGFPFFLPKGMALRNELENFWREVHHEFEYEEIRTPIIL NKQLWETSGHWFHYRENMYTTIIDEEEYAIKPMNCPGGILVYQNEMHSYRDFPLRYAELG LVHRHELSGALHGLFRVRAFTQDDAHVFMLPSQMQSELMKVIELFDRIYSQFGLKYHVEL STKPDNAMGDDAIWEAATEALRNAIEAKGIPYVINPGDGAFYGPKLDYHIEDSLGRTWQC GTIQLDMNLPERFQIEYVGEDGQKHRPIMIHRACFGSMERFIGILTEHYAGAFPTWMAPV QVKILPISEKHVEYAKDLAKQMHRDYVRVEVDDRSEKIGYKIRQAQMAKVPYMLVVGDKE VEEGTVNVRKHGGDELGSVPFEEFFNSIKTEIKERN >gi|292596541|gb|ADCV01000007.1| GENE 77 82815 - 82949 149 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARDSDMFCLYWLSSKGEHIIRGPFSLKYKCININEEKIYNLWI >gi|292596541|gb|ADCV01000007.1| GENE 78 82971 - 83960 1291 329 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1173 NR:ns ## KEGG: Vpar_1173 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 329 1 329 329 599 98.0 1e-170 MKQSILKRALLTACLGVSMAGVAMAGPVGPVIIPQAGDVVVINHGPDMTFTGNINFDVES QTNNNLQIGSTVIPNVVYGAAFNKSGAPDTIIPAQTYVYVGTKDGANAFTEASDADKKGA SWNVETLKKTKSGDVQLASRGVPEKPLANQVATIKDSIMLSAVDLSTTEVGRNSKGVLYM TVPKELKLSADTGIPDDVRETMPAMFRGKMGDSLMVNLMPLNEEEKQQLAANSHNANTIV FNRGMNMAKMIGSSARTSKVYTYMKDHYLNLVIVAKDYDDNGARGSGVMMVSKQDSSNDV LLTLYKGPDLSTSKLEKVIGAMLSTNFKR >gi|292596541|gb|ADCV01000007.1| GENE 79 83957 - 84025 57 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTILDLQLHQMYTNYREMRVYL >gi|292596541|gb|ADCV01000007.1| GENE 80 84062 - 84337 314 91 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1174 NR:ns ## KEGG: Vpar_1174 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 90 1 90 93 172 96.0 4e-42 MSGAALEPSKSIGAFPDVPDLATSGEEAYVYFHIDPKHTNFINRIIEGYEYLGVMTSVDA SGRCMLRCTPSTRPLALEVLSSLSDYVTIEV >gi|292596541|gb|ADCV01000007.1| GENE 81 84341 - 85585 1349 414 aa, chain - ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 7 404 5 401 406 421 53.0 1e-117 MAEHFMELLCPAGNMDKLKMAIRYGADAVYCAGKRFGLRAGNSNFSDEELKEAVEFVHAH GKKIHVTCNIIPHNEDFEGLEDYLKFLESIGVDAIIVADMGIFSLAKRVAPGLELHVSTQ ASTTNWHTVQMWKELGATRVVAAREVSLADLKEMKDHVDIEIESFVHGSMCISYSGRCLL SNYMTGNRDANRGQCSQSCRWKYSLVESNRPGEYYPIEEDEHGTYIFNSKDLCLIHRIPD LYEAGIDSLKIEGRMKSVHYCATVAKVYRTAIDTYLKEGKDWYVRPEWIAELEKISHRPY TDGFAEGRPDETAQNYGKSTNTQSHDFIGLVMGYNEEEKYVDLEQRNNFKVGDKVEFCQP KGELVETVIEKMTDEDGNPIDVAPHAQMKVRIYMDTPLEPYSMMRRECKSKEDE >gi|292596541|gb|ADCV01000007.1| GENE 82 85585 - 86193 463 202 aa, chain - ## HITS:1 COG:CAC1686 KEGG:ns NR:ns ## COG: CAC1686 COG4122 # Protein_GI_number: 15894963 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 6 202 23 216 216 128 38.0 6e-30 MILNDILNEQRIYAIINDVPILRESEVHLFEELIGLYRPTSVLEVGTAIGYSALLMAPLL DEEEGHITSIELDDVRYEMAKYYINQSDYADNITLLKGDASQVLTELTGEYDLVFLDGPK GQYLKQLELILPHVKEGGVILADNVLFRGYVRGDKEPPKRFKTIVKRLQEYLTYVENKEL FNTTIYPMGDGMSVSVWKGHNK >gi|292596541|gb|ADCV01000007.1| GENE 83 86217 - 87650 1696 477 aa, chain - ## HITS:1 COG:CAC1685 KEGG:ns NR:ns ## COG: CAC1685 COG1559 # Protein_GI_number: 15894962 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Clostridium acetobutylicum # 1 334 7 338 339 168 30.0 2e-41 MRKALRYILILVIVGILIIGGGLGALYFVPNTFAQDDGTQVVVIEKGQTGTEIADMLFER GLIRSTQGFKLWLYLSGTNDKLQTGHYQIPNKVTVRELISLLQEGHVESIRVTIPEGYTV GDIAIVLEKNQIMKAKDFLAEAKTYVPYPYMKGTKPATYPVEGFLFPSTYEIPVGATPRD VIQMMADEMNRYLTPAVKKQIQAQHMSIHDFVTLASIVERESLFDADRPTIAGVFKKRLA HGIPLQSDATISYVLGYAKENVTIGDTQLQSPYNTYVSKGLPPGPISNPGKKALDAVLHS ENTDYLYFVADKEGHNHFSKSYEEHLAAVNKIYGADTVKNSSANTEVAAQAGPNYDVAVA TTEPNYNYSSAEAVEADSQYVDVEPSYKYTPTTVPAAEIPDPVPGSTQNQSSTQVTPSAP SYGNNANNNTYVPTTTPVPESMQNVIPNAQQVPQIQVEPANPAERSTLVVPSGTNNR >gi|292596541|gb|ADCV01000007.1| GENE 84 87890 - 88186 496 98 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1178 NR:ns ## KEGG: Vpar_1178 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 98 1 98 98 111 98.0 8e-24 MVDQNFEGEVYYLEFEDEHGNKQYFTEDVILSHEGQEYAVLVHVQDEDADHEGQDDTYMI LARIETNEEGVEEYVPLDEEDENFETLVKLYEDMDEDE >gi|292596541|gb|ADCV01000007.1| GENE 85 88212 - 88622 551 136 aa, chain - ## HITS:1 COG:BH1269 KEGG:ns NR:ns ## COG: BH1269 COG0816 # Protein_GI_number: 15613832 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Bacillus halodurans # 1 134 4 139 140 146 56.0 1e-35 MSLDVGSRTIGIACSDALLMTAQGIETIRRTSLEKDFNRLQELISEYEVHELVVGMPKNM NGTKGERAEKTEEFVAKMKEVIDLPVTYWDERLSTVMAERQLIAADVSRKKRKSVIDKMA AVVILQGYLDRLQFNK >gi|292596541|gb|ADCV01000007.1| GENE 86 88631 - 88891 456 86 aa, chain - ## HITS:1 COG:SPy2114 KEGG:ns NR:ns ## COG: SPy2114 COG4472 # Protein_GI_number: 15675864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 80 1 80 89 88 53.0 3e-18 MNVSDETMLFRKVDDEPMTAEEVLTRVYQSIQEKGYNPINQILGYLISGDPAYITSYNNA RSDIRRLERDDLIEELLKEYAKAKQL >gi|292596541|gb|ADCV01000007.1| GENE 87 89046 - 91661 3514 871 aa, chain - ## HITS:1 COG:CAC1678 KEGG:ns NR:ns ## COG: CAC1678 COG0013 # Protein_GI_number: 15894955 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 871 4 881 881 799 48.0 0 MKGNELRQAYLQFFESKGHLKLDSFSLIPENDPSLLLIGAGMAPLKPFFTGKLVPPCRRI TTCQKSMRTGDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIHWAWEFLTEVIKLDKNRL YVTVYPDDQEAYDTWHNDCGVEESHITRLEDNFWEIGEGPCGPDSEIFFDQGPEHGCDDP NCAPGCDCDRYLEIWNLVFTQFNKMPDGSYEPLQHKNIDTGAGLERLASVLQGCKTNFET DLIFPIIEATAKRAGVTYNEDPNTDVSLKVIADHARAVTALISDGVLPSNEGRGYVLRRI LRRAVRHGRLLGIEGIFLTPLIDVVVDILGPGITSIAEKQDFVKRVVQNEEERFNQTLEQ GLELLNSLIDTLAAEKATVVPGSEVFKLYDTYGFPWELTEEIASERGFTIDHEGFEAAMK EQRERAREARVKEDAKVATPDITFLKDEELVEDEAETASSVLMLGKGSERLQTAADGDEI TVIVRTTPFHAEGGGQLGDTGFIVGPMGKVEVHNTKRLPEGTVYHIGTVIEGSISEGDDV TLEVDTNRRAAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPDYLRFDFTHFSPVTQEE LDQIEALVNEEILKATDLAIAEMSMDEAKAKGAMALFGDKYGDVVRVVEVPGFSVELCGG SHVGNTAFIGSFRLTSEAGIGSGVRRIEAITGRAALEAAKQDRLTIERMASELKTKSPQI EERLHQVLTEAKETVKELEQIRKEVSAAGAADIIAGKVMVGDVEFVGAAVKASSIDELRD LADMGLDKLNGSGVVLVGAAMGDDKVNFVCKVSKDVVAKGAKAGNIVKAAAQVAGGNGGG RPDMAQAGGKEPAKLMEALKAGGEALKSMLQ >gi|292596541|gb|ADCV01000007.1| GENE 88 91939 - 92751 196 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856514|ref|ZP_02479226.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755] # 160 268 69 174 175 80 36 9e-14 MKSKYSKVKITALTLTFVCATTAMVGATTLQYGDKGKSVTAVQQQLIKHGYNATDKNGVY GKETKWAVRLFQQDRGLPVDGIVGPATYNALMGAPRSTKAVLTQNAATKAVATKSAFTNS NATSRRIAGQSINGKNVKLNNITKNETPSSIHAILAEADKYRGVPYVFGGTTPSGFDCSG YVKYVFEKQGISLPRLADEQYNVGVEVSRANLKAGDLVFFETYEPGPSHSGIYIGDGKFI SATSSRGVAVADLDTGYWGERYIGAKRVVR >gi|292596541|gb|ADCV01000007.1| GENE 89 92836 - 93846 638 336 aa, chain - ## HITS:1 COG:lin2695 KEGG:ns NR:ns ## COG: lin2695 COG0463 # Protein_GI_number: 16801756 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Listeria innocua # 2 301 3 305 315 269 41.0 6e-72 MLLSIVVPVYNEEENIANFYKAVTDVMSGLTYDYELIFVDDGSSDSSAMILREIAFNDKH VKVLLLARNFGHQTALTCGLDYAHGDAVITMDGDMQHPPALIPELVRLWESGYDVVRTIR DSTDDASWAKSFTSKYYYKLMNKMADVPIVEGGSDFRLMNSKALGTLKRFREHGRFLRGI VGALGYRQAELHFVAPPRFAGVSKFSVRKMIRFALDGVTAFSRVPLRAALYVGVLCGGMS FLLILHLLYVYLTGQALNGWTTLGVSILFIGGIQLVGLGIIGEYVGRIFEEVKQRPLYWV KSAINFEEHEEAPLLGPSSADVFMAPEAYTNKSKED >gi|292596541|gb|ADCV01000007.1| GENE 90 94224 - 94601 497 125 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1184 NR:ns ## KEGG: Vpar_1184 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 125 1 125 125 229 99.0 3e-59 MIENYGNVRAVLNELRLALKNLRETGETYSIYIEKTGLTEEEQVEVLETLGRGHITINFN ETDQPVEWYESQFSGIWIGTYKNGRDDSILHTVEVAKYPVVAGAYIEDMELAEEDLQSWI DAAGL >gi|292596541|gb|ADCV01000007.1| GENE 91 94652 - 95248 563 198 aa, chain - ## HITS:1 COG:aq_667 KEGG:ns NR:ns ## COG: aq_667 COG0680 # Protein_GI_number: 15606081 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase maturation factor # Organism: Aquifex aeolicus # 36 195 2 161 162 136 40.0 2e-32 MTKTSTDIISGLEQYADSKGPRIDLNSLYDDGDNEIILLGVGNILLTDEGLGVHVVKELK ESFTFTPAISIIDGGTMGMELLTYMRGMKKILLVDAINGGDAPGTIYEFPHKELEQYFTE HISVHEVGMQDILRIRAIQEDPLEDAVVIGVEPESLEIGFEPSEPVQCALPEVKKRVLNV LREWGVVAEPKAQSENFI >gi|292596541|gb|ADCV01000007.1| GENE 92 95241 - 96050 853 269 aa, chain - ## HITS:1 COG:aq_665 KEGG:ns NR:ns ## COG: aq_665 COG1969 # Protein_GI_number: 15606079 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I cytochrome b subunit # Organism: Aquifex aeolicus # 8 234 3 227 228 188 46.0 1e-47 MLIHTDKKAYVVFSLWLRIFHWTMVLSVTALFWTGLYIGDPGFAAITGNPEPTFAIDGWF SMETMRRIHFTAGVILTFSFIFRFAGALWNRGDRLLPKFRQKRYWYGLKETTLHYLMIPQ KHEHHWLRNSLARTAYMMVYIMFFFEILTGFAMYSMIDPNGVLGTLFAPVVTLFGGEYKV HVIHHYIAWGFLFFTIVHVYMAFREDVMEESGEVSAMVSGMKYYAHDPIDIEDLNGKRRR GERIDKPSGTTYRPSDPNDPRERELQEND >gi|292596541|gb|ADCV01000007.1| GENE 93 96065 - 97966 2540 633 aa, chain - ## HITS:1 COG:aq_662 KEGG:ns NR:ns ## COG: aq_662 COG0374 # Protein_GI_number: 15606078 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I large subunit # Organism: Aquifex aeolicus # 1 631 1 630 633 881 64.0 0 MKRVVVDPISRIEGHLRVEIKVDEASGKVEDALSSGTAWRGIELVAKDRDPRDLWAFVQR ICGVCTTTHALAALRAVEDAIGITIPKNANYIRNIMHSSLDVHDHIVHFYHLHALDWVSP VAALSADPAKTAQLQNDVLATYNVSGLAPAETASKDSAYPKEFPKATTAYFTAVQQKVKK IVESGQLGIFSAQWWDHPDYNLLPPEVHLMAVSHYLNILDRQRDIVIPHVVFGGKNPHPH YIVGGMPCSISMNDMNAPINTQRLAAVEQSIALTKDLVDNFYVPDLLAIGKIYVEKGMID GGGLAKKRVMSYGDYPDDTYTGISNGDYHKKCIVRSNGVVENFALGVDKATFIPLEGKDF MDPQYLSEEVDHSWFTYPDGTKTLHPIEGVTDPKFTGPKSGTKEKWEFLDEDKKYSWIKS PTFKGKTAEVGPLAKYIVVYTKVKQGIIKDPTWAESMIVRQIDTVSQVLGVPAHVWMTTM VGRTACRGLDAQVAANISQYFFNKLVSNIKNGDTTVADMTKFEPNTWDKDAKGVGLVDAP RGGLGHWIHIKDGRSANYQCIVPSTWNACPKTAANEHGAYEDSMIDTHVKIADKPLEILK VIHSFDPCLACATHLYNKKGEKIVSVNTDALCK >gi|292596541|gb|ADCV01000007.1| GENE 94 97966 - 99105 1242 379 aa, chain - ## HITS:1 COG:aq_660 KEGG:ns NR:ns ## COG: aq_660 COG1740 # Protein_GI_number: 15606077 # Func_class: C Energy production and conversion # Function: Ni,Fe-hydrogenase I small subunit # Organism: Aquifex aeolicus # 5 328 1 324 353 461 63.0 1e-130 MKNRINSLWTLFQERRLSRRTFMKSCVALTAILGLPPTMLDTVVKAAETTELPTVIWLHG HECTGCSESFIRSSSPFTSDVILNMISLEYDDTLAAASGAPLEEHLEKIIKEKAGKYILA VEGGVPLDEDGVYCTVGGRTFKESLLEAAKGAAAIIEYGSCASWGGIQAAKPNPTNTVSV SSVVSGKPIIKVPGCPPIPEVMTGVIMHYALFGQIPPLDSQGRPKQFYGNRIHDTCYRRA FFDSGLFVEKFDDDASKSGWCLYKVGCRGPQTYNSCGNLRWWNGLSYPIQSGHGCIGCSE KGFWDNDVFYKRLPDIPLANTITTADTIGTVVAVGATAAVIVHGAATLTRNKILDMKEEK RLKEQGLWDEKKHNNGGGH >gi|292596541|gb|ADCV01000007.1| GENE 95 99172 - 99357 118 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTEIILLASSITLKKFNQHDDNHIFTILLYHLTFLKTMKFNKKAVYKKLTFLIYSLMLFI S >gi|292596541|gb|ADCV01000007.1| GENE 96 99379 - 99708 511 109 aa, chain - ## HITS:1 COG:YPO3868 KEGG:ns NR:ns ## COG: YPO3868 COG0526 # Protein_GI_number: 16124003 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 8 105 9 104 108 73 36.0 8e-14 MAITAITSVQEFDEKVLGAKGLAIVDFWAGWCEPCTVMRPEIEDVAERLKGQVEFFSVNA EDKNLRGILLKEDVDGIPSLVFFRDGKMLDSLVGYKKADMLESLIKEVI >gi|292596541|gb|ADCV01000007.1| GENE 97 99778 - 99882 66 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVPPTFRVVSLERAGDCTPRKIIVTAQAEQNSAY >gi|292596541|gb|ADCV01000007.1| GENE 98 100166 - 101269 1194 367 aa, chain - ## HITS:1 COG:BS_yqfO_1 KEGG:ns NR:ns ## COG: BS_yqfO_1 COG0327 # Protein_GI_number: 16079572 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 5 124 8 127 130 125 50.0 1e-28 MITVQQVITLMEQLAPRSYAESWDNVGLMVGDRNAVVTGVVTTLDVTEETLEYAIEQNCN LIISHHPLIFKGLKQISCDTAQGRTINKLIQHKIAVYSAHTNLDIAPGGLNDMLAKQLGL TDIKGFIKTGEEVLYKVTTFVPESSADAVRMAMGDAGAGRIGNYEYCSFSIHGEGRFVGN EDSHPVIGSAGALTVAPEVQVNAIVDGTHLSEVVAAMKSAHPYEEVAYEVLNIVEPTSST QYLGRVGRLPNALNLDSFREWVQEALPDANIRFAGIVPKAIQSIALCSGAGAEFIKDAAR LHIDAYITGDVKYHEAQMAKELGLLVVDAGHFGTESIVAHGLRDYLISAGLAVPVKAFTE QNDFFFV >gi|292596541|gb|ADCV01000007.1| GENE 99 101285 - 102016 767 243 aa, chain - ## HITS:1 COG:BS_yqfN KEGG:ns NR:ns ## COG: BS_yqfN COG2384 # Protein_GI_number: 16079573 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Bacillus subtilis # 23 168 1 149 216 103 37.0 2e-22 MEPRPMMDRLEAVFSIVPKAHAIADIGTDHGYLAVELINRQRAEYVIAGDVHKGPLESAR AYVESCGLAAKVDCRLGDGLKVTEKGELNGAICCGMGGFLMRDIVDAGPEPLEFYVLQPQ NGQKELRQYMVQKRYVIVLEIIVEDAGKLYTAFLAVRNDCVEAYTGMTEYIDVYQALPED SLLWSVGALLEQDRPPLWMKYIEYLIYQRQCALDDMTEKLSYTDKYQDLEQEVNFLRNLL ENK >gi|292596541|gb|ADCV01000007.1| GENE 100 102349 - 102912 647 187 aa, chain - ## HITS:1 COG:CAC3626 KEGG:ns NR:ns ## COG: CAC3626 COG0302 # Protein_GI_number: 15896860 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Clostridium acetobutylicum # 1 187 3 195 195 197 51.0 1e-50 MDTKKIESLIYQLLEALGEDPNRDGLLETPKRVAQMMEEVYEGIQYTNAEIADMYGKTFA VDTNQMVVVKDITCFSHCEHHMALMYDMSISIGYIPKGRVIGLSKIPRIAEMCCKRLQLQ EKIGEDIAEVISLATGSDDVIVHITSSHSCMSARGIKSTDSQTTTLTTKGVFNEDHMIHR FMLMKQS >gi|292596541|gb|ADCV01000007.1| GENE 101 102994 - 103749 347 251 aa, chain - ## HITS:1 COG:CAC3625 KEGG:ns NR:ns ## COG: CAC3625 COG0602 # Protein_GI_number: 15896859 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Clostridium acetobutylicum # 3 251 5 221 221 147 35.0 3e-35 MNVIEIFASIDGEGSRQGLLTTFLRLHDCNIRCSYCDTTYSYGIDSVFTEMTVAEVADVI ESLGNHRITITGGEPLLQEGAVVKLIDELNCRKALKIQNSPSNQSELTCINDVDKDLDTF DKRERPNNSPYDFNIETNGTIVPSFQRENVWFTYDYKTPSSLAEESMNIDIFKVATERDL IKFVVGSPEDLDCMRRIISKYPTVAQIYVSPVWGQIEAASIINYMKTYNLQNVRFQLQIH KFVWDPDAKGV >gi|292596541|gb|ADCV01000007.1| GENE 102 103736 - 104074 454 112 aa, chain - ## HITS:1 COG:mll5797 KEGG:ns NR:ns ## COG: mll5797 COG0720 # Protein_GI_number: 13474825 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Mesorhizobium loti # 1 88 2 93 119 72 45.0 2e-13 MFTVTKRLEVSASHQLKLDYPSKCQNLHGHNWIITVHARSKELDHNGMVIDFTIVKEKIH GRLDHRHINDVLGDINPTAENMAKWIADELGSKCFKVEVQESEGNTAIYERD >gi|292596541|gb|ADCV01000007.1| GENE 103 104254 - 105435 1421 393 aa, chain - ## HITS:1 COG:BH1376 KEGG:ns NR:ns ## COG: BH1376 COG0568 # Protein_GI_number: 15613939 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Bacillus halodurans # 17 393 16 371 372 412 65.0 1e-115 MVKKESAVAKKVQKSQIEEIVEQLLEKGRKSGVLTQSEISDALHEQTEITAEQLDDIYTT LGKLNVEIVADIDADDTDSHTIETDEDEDEVSSEKKISIDLSVDSGVNIDDPVRMYLKEI GRVPLLSADEEIVLAKQIEAGAQEDATYKDIQLSKKAKKKLVDANLRLVVSIAKRYVGRG MLFLDLIQEGNLGLIKAVDKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVE TINKLIRISRQLLQDKGREPLPEEIAEGMGITVERVREIQKIAQEPVSLETPIGEEEDSH LGDFIEDQDAIAPDDAASYILLQEQIEDVFTCLTDREQQVLILRFGLKDGKPRTLEEVGQ HFNVTRERIRQIEGKALTKLRNRGKRDKIKDFL >gi|292596541|gb|ADCV01000007.1| GENE 104 105443 - 107215 1182 590 aa, chain - ## HITS:1 COG:BH1375 KEGG:ns NR:ns ## COG: BH1375 COG0358 # Protein_GI_number: 15613938 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Bacillus halodurans # 1 518 1 529 599 363 39.0 1e-100 MSRYFENELIEQIKDANDIVSVVSEHVALKKRGKNYWGCCPFHNEKTPSFSVAPEKGFYY CFGCHASGNAIKFLMELEHLTFVEALERLANRANIPLPEAKLSPEQRARDERRKKLYEAS DLAATFFHNCLTQTSIGKVGLDYLKKRGLTQATIETFKLGFAPDGWDKLYRAFHDRGIDD SILLELNLVRKNQKGQFYDFFRNRIMFPIMDGKGRVVAFGGRVMDDSTPKYLNSPESSIF EKGKLLFAFDKAYKSIREEKQAILVEGYMDVISAHNHGVTNVVASLGTAYTRDHGHILMR QAEEIVLAYDMDGAGRQAAARAIELLQNTDFKVRVLAMPDGKDPDDYVRNHGGQAFKELV AKAVKPLDYLLSESLIKHDTNDTEGKQAVMADVFPYIANIDSQTQRDDALKTLALPLWLD NSTIFRYFRDYVKKGQIELVDTASTPLPTQDLPRGDAEKLLSLAFTNGEVLQHMMSYLPL EDFEKIEYRGIIEKLFTLYKSEGRLDETAIQSVLSSQEYDIYSRLVVMSDDEYKVQVPAL IRKIRLHSLREQYKAHSIMADQLKRAGDSTFISELHKCQEIQNLIREWSK >gi|292596541|gb|ADCV01000007.1| GENE 105 107471 - 109099 2334 542 aa, chain - ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 40 542 12 514 514 562 66.0 1e-160 MMIWLIDNLMHKGHKKEHESSILRNKKEVKEILEYSLIAVVMVLIGLGVGYFLRKNIAEG KLNQAEQEAARIIANGERTAESKKKEALLEAKEEIHKLRSDVERENKDRRSELQRMERRI LQKEESLDKKLDNIEHKEEALHRKEADLAQSREKVEALYEKQMAELERISGMTFEEAKNI LLTNVEQEIRHETAIMVKEMEQQAKDEAEKKAKEIISSAIQRCAADHVAETTVSVVALPN DEMKGRIIGREGRNIRALETLTGIDLIIDDTPEAVILSGFDPIRREVARIALEKLIVDGR IHPARIEEMVGKARKEVDQTIKEAGEQATFEADVHGLHPEIVKILGRLKYRTSYGQNVLK HSIEVSHLAGLMAAELGCDVTLAKRGGLIHDIGKALDRELEGSHVQIGVDVARKYRESAA VINCIGAHHGDEEFQTVEAVLVAAADAISAARPGARRETLENYLKRLSKLEEIAESFEGV EKCFAIQAGREIRVVVKPDKIDEAESTLLVRNIVKRIESELEYPGQIKVVIIRETRVVDY AK >gi|292596541|gb|ADCV01000007.1| GENE 106 109191 - 109634 422 147 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1198 NR:ns ## KEGG: Vpar_1198 # Name: not_defined # Def: regulatory protein RecX # Organism: V.parvula # Pathway: not_defined # 6 147 1 142 142 231 94.0 8e-60 MSDETMQAAMDQAYRFLAQRFLSSYELTQKMRRKQFEDPIIERVLERLKDYDYINDERLS EQVLAYLMKEQKYGAYMIKQKMKLRGLAIPQEISAYDEVKAAYRVVEKKFGSILNEEKTP RVKVFSFLKYRGFSTSTIQVVCNDFYE >gi|292596541|gb|ADCV01000007.1| GENE 107 109637 - 110677 1604 346 aa, chain - ## HITS:1 COG:BH2383 KEGG:ns NR:ns ## COG: BH2383 COG0468 # Protein_GI_number: 15614946 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Bacillus halodurans # 6 346 4 344 349 456 69.0 1e-128 MAVDGRQAALDNALKQIEKDFGKGAIMRLGEAADRMNVEVISSGSLAIDIAVGVGGFPRG RVIEIYGPESSGKTTVALHAVAEAQKQGGIAAFIDAEHAMDPVYARNLGVDINNLLISQP DNGEQALEITEALVRSGAVDIVVVDSVAALVPKAEIDGEMGDAHVGLQARLMSKALRKLT GIISKSKTVVIFINQLREKVGVMFGNPETTTGGRALKFYSSVRLDVRKGELIKANNENVG ARTKVKVVKNKVAPPFKTAEFDLMYGEGISKTGTLIDIGTNMEIINKSGAWYSYNGERMG QGKEAAKQYLLENPQIADEIDRIIRDTLAVGTEEIDVIGEEVTEEV >gi|292596541|gb|ADCV01000007.1| GENE 108 110682 - 111929 304 415 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 267 412 759 904 904 121 43 3e-26 MIVELISTGSELLLGDTVNTNVSWLAQELNKLGYTIAHQSVVGDNPKRMAEVFQLASTRA DIVISTGGLGPTQGDITRNVLADSIGRPIVFNQEAMNELERFFKSVNRTIPDASRREAQL PKGAKVLYNPVGVAPGVVVEDGDTTYILLPGPPGEMKGVFQESVVPYLNGRFGSQGVVTS YRYGVYDIREIDLESTLMDLIKKQSNPTIALLIKKGYIEVRITAKAETLEAAQDLLNPWD AIIRERLGSRIGRNLTISMEETLGRTLLEEHSTISTAESCTSGLVGKLLTNVSGSSEYYM GGVISYSNDVKHRVLGVPQDMLDTYGAVSEQVAKAMAEGARTVGQTTYAVSTTGIAGPGG GTREKPVGLVWFGVTGPYGTVAHKANLIGNREDIRQSAAELALYYVYTYITEKGK >gi|292596541|gb|ADCV01000007.1| GENE 109 111967 - 113313 2200 448 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase [Veillonella parvula DSM 2008] # 1 448 1 449 449 852 95 0.0 MGKKLGYVSLGCAKNLVDTEVMLGLLRDNGYSITEDLSEADLIVVNTCTFIEKAKAESIN TILEVAQYKEDGTCKGLIVAGCLSQQYQDELFQEIPEIDALIGTGAWDQVMVAVDAIEHG NRSCIMENITNIYDERMPRIQTTPRYSAYVKIAEGCNNGCTFCIIPKVRGAFRSRTIESI KAEVERLAATGVKEVVLIAQDTTSYGIDLNAGKPLLTTLLKELTTVEGIEWIRMLYLYPT FFSDELLDIIVNEPKLCKYVDIPLQHVNNDILKQMNRRDDRNDIERLLKKIRNAPTHITL RTSIIVGFPGETDEQFEELCDFVKEIKFDNMGVFTYSQEDGTPAGAREDQIPEEVKEERY HVLMSIQAAISEENNRNLEGTIDYAMVEEIEEGENNTLLAKGRLKSQAPDVDGNMYIEDC GEDIQPGDILKVQVEQGFAYDVVATVVE >gi|292596541|gb|ADCV01000007.1| GENE 110 113369 - 114406 909 345 aa, chain - ## HITS:1 COG:ECs0415 KEGG:ns NR:ns ## COG: ECs0415 COG1840 # Protein_GI_number: 15829669 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Escherichia coli O157:H7 # 169 344 164 343 343 88 31.0 2e-17 MKRWIAPSILALFVVGMLIYGINFYQQEQIEQAKEPIRGEIIVYTDLPNTLTAMLAERYE EEQKVKVTVMPLTEEQMSQRSASTVADTSGDLVLTSEDNLVIGANAGKYMPIVNERIDEV RDNLKDPNGYWVGIWYDPIVFVQNDTFHNGIGKYITTWDTLGKQGDWSIVMTDFVASQNA ANLLYNMVEYKGEPEALEYLYSLKPHVVQHAKFLSTPIRLTALGETNIGIGNLSDAAQYS HHGYPIKIIYPKDGTSYYVTGAAVLKNSKHKADSVEFINWLLSSKTAKYMVEKNFTYIFT NPEMDEPKDSMGHDLVLWPVNGGYTLEGKKLLLNHWVSQVRFRKD >gi|292596541|gb|ADCV01000007.1| GENE 111 114463 - 116409 1632 648 aa, chain - ## HITS:1 COG:MA4618 KEGG:ns NR:ns ## COG: MA4618 COG1032 # Protein_GI_number: 20093399 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Methanosarcina acetivorans str.C2A # 3 592 125 736 742 607 50.0 1e-173 MDRFLVTEPSDMKERGWAELDFVLISGDAYVDHPSFAPAVIGRYLESKGYRVGIIDQPDW NDVEAFKKLGKPRLASLVTAGNLDSMLNKFTAAKKVRRQDDYSPGGESGHRPDRATLVYA NRMKEAYSDVPLIIGGIEASLRRFGHYDYWSDTVRRSILVDSKADVLVYGMGELQIVELA DALDQGRFKESLPSIRGICYMAKEIPTIDYVECPSYEAIKADKMDFADAFRIQYDEQDPF YGRIVVQKHGDRYLIQNTPALPLTQEEMDGVYNLPYTRKWHPKYDDKGGVPALSEVQFSL VSQRGCFGSCSFCAITNHQGRIIQNRSHESLIEEAHMMIKMDNFKGYIHDVGGPTANFRH LACDKQAVYGACKGRTCAAPEPCENLNTNHDDYIALLRKLRKLKGVKKVFVRSGLRYDYV LADNNKDFVRELCEFHVSGQLKVAPEHVSKRVTNMMGKAGKEEFLTFKSWFEEANKKLGK KQYLVPYFMSSHPGCALEDAIELAEFLRDHHMYPEQVQDFIPTPGSLSTCMYYTGINPLD GKPVYVAKKGRDKAKQRALMQFKNIENYDLVKEALIEANRRDLIGFGPECLIPPRPIGGN SKRISQSSKSRNGKRGCESRNRCQTGKRRSRDVTKVRTSNKSFGGRYM >gi|292596541|gb|ADCV01000007.1| GENE 112 116449 - 116901 477 150 aa, chain - ## HITS:1 COG:lin1432 KEGG:ns NR:ns ## COG: lin1432 COG1426 # Protein_GI_number: 16800500 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 150 1 139 311 72 28.0 2e-13 MAELGEELRRERVRRNLTFKDVEQVLHIKTTYLEAIEDGNYDIIPGQVYVKGFIRNYGNY LDLDGDRLVKVYQGQVGDIDTFSLRSVTRRKAQATPNLVQSEFVEYQTSKKRMSLETRQR KRQRSIVQERIILGIILVCMALFLLWLFLF >gi|292596541|gb|ADCV01000007.1| GENE 113 116950 - 119694 2993 914 aa, chain - ## HITS:1 COG:BS_spoIIIE KEGG:ns NR:ns ## COG: BS_spoIIIE COG1674 # Protein_GI_number: 16078743 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 435 901 311 781 787 528 57.0 1e-149 MAEENTSTKRRNTRRKRTSTKQQSKSQSFSLRSEVKGLIVIAFAVISFLGFFGFELGLVG QILTGIFRYGFGLGGIIPCLCVFWLGWRLLYKDTFISITKRGVVMTLFFLFLLALVPLWR VPEGQELITTQLANQGGFVGGAIATFLRTLLGNLGAIILDVFLLIAFGLLVTRLSLRSGL QKAADKTQVGLDVAKEVAAEKVAVAKEVFEDWNEQRKEAAEQRKAYNREKDTRFADAADQ ALDALEKQGIATGRDLFDSTTAVDVDPIEDTVTTMESQRTPTSWKELAEIEARNRAAEQL ANISEASGDAKSYEADNFEQFSDTHRSTSDDYVYVPDEDYSYTPDEEYSDEGGTVENSDD EEPEFSYQNTTIGPLETNHGAIASAVPGTGAAASSVSAGAGMAGMGLQVPSIISTTEDTA QVAVSKDGQIHRSYDRPYHFPSLDILAKGKGSQNNGEEVAQNAMMLEHVLSDFGITAKVV NATQGPTVTRYEIEPAPGVKVSRIVNLTDDIALNLAAQHIRMEAPIPGKSAIGIEVPNKT TEAVHLRDVLDCSDFKDARGGIPVGLGKDIAGKPVITDLAKMPHLLVAGTTGSGKSVCVN TLISSILFSRKPEEVKLLLIDPKMVELSIYNGIPHLMAPVVTDMKKAAAVLRWAVREMEA RYKAFAASGKRDIKSYNEAHPKAAMPLIVLIIDELADLMMTAPDDIEESISRLAQMARAA GIHMVLATQRPSVNVITGSIKANVPSRISFAVGSQIDSRTILDMAGAEKLLGKGDMLFAP IGANKPIRVQGAFISDDEVEKLVEFVKAQREPEYDNTVTQEVEKEAEKESSDNNDVYRDE LLERAVNLVMESGQASVSMLQRRFRIGYTRAARLVDTMEDLKIVGPSMGSKAREILMSPE QAKARYFSDSNDEQ >gi|292596541|gb|ADCV01000007.1| GENE 114 119777 - 121078 1036 433 aa, chain - ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 2 424 29 458 473 361 45.0 1e-99 MDSLFDMTPTNTYEPLPVRMRPTKLDHLYGQEKAVGKGTFLRAMVEKDTIPSMLFYGPCG TGKTTLAGIIAKVSNSYFVNLNATNAGIGELRTIIEDARKRVRSLQQRTILFLDEIHRFN KSQQDVLLPCVEDGTIILIGATTENPFFEVNRPLLSRLRLITLEALTPKAIGQILRRAIT DEEVGLGKRHLQVTDEVLEDVGIFVNGDGRMALNILEQAAAMVPDEGMITIEVLEKVVGR RIYTYDKKGDSHYDTISAFIKSMRGSDVQATVHYLARMIEAGEDPNFIARRIVICAAEDV GLADPQALILANAAAQAAHMVGFPEARIILSEAACYVALAPKSNSAYVAIDAAISDVRHK DCGQVPDHLKDSHYSGASKLGHGKAYKYAHNYPNGFVKQQYLPTPLVDATYYKGIKRGTE EQLLHDWEKRCKN >gi|292596541|gb|ADCV01000007.1| GENE 115 121575 - 123380 2289 601 aa, chain - ## HITS:1 COG:BH1252 KEGG:ns NR:ns ## COG: BH1252 COG0173 # Protein_GI_number: 15613815 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Bacillus halodurans # 9 591 4 591 595 694 57.0 0 METMQGLHRTHGCGTISEQEVGKEVVLCGWVERRRDHGGLIFLDLRDRSGVVQVVASPDH NVESFHKAEDVRNEYVLCVRGKITKRDEAAINPNLPTGAYEMFCEELRVLNSAKTPPFYI QDDIDVDENIRLKYRYLDLRRPEMQRNLILRHKVTKAMRDFFDSRDFLEIETPMLTKSTP EGARDYLVPSRVNAGTFYALPQSPQIFKQILMVAGYEKYFQIVRCFRDEDLRADRQPEFT QLDLEMSFVDEEDIYALLEEMIAHVFKTALGKEISLPMPRITWDEAMDKYGSDKPDLRFD MAFTDVTDLVKDTEFKVFRSVIDNGGVVKGIVVPGDAGIPRRELDDLVEYVNRYGAKGLA WACFNEDGSIKSQIMKFLGEDTIRNIGEKMGAKGGDLVLMIADKPATVARALGELRLEMA RRMNMIDQDKLAFTWVTDFPMFEYNEDEKRYVAMHHPFTMPRHADLDKLESDPGSVKAIA YDMVLNGVEIGGGSLRIYQADVQEKVFKAIGLSIEEARSKFGFMLDAFQYGAPPHAGCAF GLDRLVMLMAKRQSIRDVIAFPKTQSASDIMSQAPSEVEPKQLKELHIKPDVEEEQEQSL V >gi|292596541|gb|ADCV01000007.1| GENE 116 123389 - 124660 1368 423 aa, chain - ## HITS:1 COG:BH1251 KEGG:ns NR:ns ## COG: BH1251 COG0124 # Protein_GI_number: 15613814 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Bacillus halodurans # 1 423 1 424 428 414 47.0 1e-115 MAIRKPRGTQDFLPEQMIHWHYIEQRMREICKVYGFNEIRTPAFEETKLFLRGIGETTDV VQKEMYTFTTGDDGGSSFTLRPENTASAVRAYLENKVYGKEGLTKWYYMGPMFRHDKPQA GRYRQFHQFGAEVLGSQSPVVDSEVICMVVQLLKDFGLKDLNVEVNSVGCPTCRPVYREK LIAFFEPKKEQLCSDCQERLYKNPLRILDCKNETCKSLSVGAPEIHEHLCEECHDHFEEL KTYLSAANVQYTLNPRLVRGLDYYTKTAFEVQYTPLGAQSAVAGGGRYDGLVEELDGPHT PAIGFAMGMERLLLALEKQNLLPEPTVEPSVFVVALGDAAKVEAFKICQALHDEYITVEM DGQGKSMKAQLKYANKINAKYVIILGDDELARKEAIIRFMDTSEQETVSLDTVAERITSL VKG >gi|292596541|gb|ADCV01000007.1| GENE 117 124660 - 126087 1063 475 aa, chain - ## HITS:1 COG:BH1152 KEGG:ns NR:ns ## COG: BH1152 COG0635 # Protein_GI_number: 15613715 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Bacillus halodurans # 68 464 85 485 498 255 36.0 1e-67 MVNGYLYTGPLPLGSVVAHNCGAAGLFSDKINPEVILEAHEMEGMYTLTVTIGDSVQIFE GPVSFMGRRQIGQALLRYLREYQGLPAEAPWGTMVGVRPTKLLHKYIDTYGSVHAATRHI RDEFSVSMEKLATLGDIGEYQRPFLSDTDDKKVSLYCGIPFCDTRCVYCSFPYGLYQDYA GKSQFLRALTRDIEDMKAIIESYNLTVDTLYMGGGTPTVLADEDFYQVLKQLSLLVPEGH EFTVEAGRPDSVNPTKLRSMLELGVNRISINPQTMQDDILRRIGRGHSVRDVDELLQYVK NNTSLSVNMDFIAGLPNQTMPNMIENMDYVCQNLPENVTIHTLALKRGSPLYDLHMEDDI PEEHLVAEMVQYGKERLEAAGYLPYYLYRQQYMRGQLENIGYTLPGKACEYNIQIMEERQ SILSMGPGSSSKWMRAPEYRQLKQHMPKDVDVYHETIDALLEKRHRICERFWEVV >gi|292596541|gb|ADCV01000007.1| GENE 118 126080 - 126568 561 162 aa, chain - ## HITS:1 COG:lin2070 KEGG:ns NR:ns ## COG: lin2070 COG0735 # Protein_GI_number: 16801136 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Listeria innocua # 1 144 1 144 152 143 45.0 2e-34 MNTTLEKLKERIKDKKYKLTTQRQTILQAFIDADENHLSAEDVYVLVKEVAPDIGLATIY RTLDLFTELDLLKRLDFGDGRNRYELNDEEFAHFHHHLICVKCGKVSEFEDDMLETLESI IAKKLNFRTIDHQLKVYGYCSDCQNHMTEAELEKLERMSHHG >gi|292596541|gb|ADCV01000007.1| GENE 119 126610 - 127245 829 211 aa, chain - ## HITS:1 COG:CAC2272 KEGG:ns NR:ns ## COG: CAC2272 COG0491 # Protein_GI_number: 15895540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 14 209 9 199 199 165 43.0 4e-41 MSEQQLVLMRMPLGPLGTNCYVIGDKAIGEAFIIDPATAEVLDALKKHDLKPKAVVLTHG HGDHIGGIQEIVNIYHVPVYIHKGDVPYLSDPELNLSAYSNPTPIMVKAEIIEVKQGDHI TCGDIDLEVLETPGHTPGGVCYYMEGLVFVGDTLFRDSVGRTDFPNGSYETLISSIKTQL YTLPDNTMVYPGHGPETNIGYEKQYNPFVGQ >gi|292596541|gb|ADCV01000007.1| GENE 120 127245 - 129485 2365 746 aa, chain - ## HITS:1 COG:lin1558 KEGG:ns NR:ns ## COG: lin1558 COG0317 # Protein_GI_number: 16800626 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Listeria innocua # 33 741 19 735 738 744 51.0 0 MTTVNEEGKALVEQSTFDKSKALAEFMEYIHTYLTDDECDQVLKAFELADKAHEGQFRAS GEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVT KLNQFQYETKEDRQMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQKRIAKE TLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVNDTMRQLT KALSEAHIKADIKGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPDCYAVLGIAH SLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYGVAAHWRY KEGNKNGDKEFDQKVAWLRQVLEWQDTSNPTELVNALKLDVFSGEVFVFTPKGDVVKLPI GSVPLDFAYRVHTDVGHHCVGAKVNGKIVPLDYTLQNGDIVDIITSKTGRPSLDWLNIVG SSESKSKIRNWFKRENKAENIEKGLEALEKEAKRLNHNWKELCADNRLQHVTKQLKAGTE EEMFAACGYGGIPVSTVLLRLIELYKKSKEVEESKRSTEQIIEKLKSQGQKKTKNGTGVL VKGEAGVMVRMAKCCNPVPGDDIIGYITRGRGVSIHRCDCPSMGHSPEDLERMIEVSWDG SSGESFHVGIDIQAYDRAGILMEVMAVLSELKITITNINAKVQEDTKNVSINLVVDIRDI SQLDFVMTKLRRIREVYTVQRSKGGA >gi|292596541|gb|ADCV01000007.1| GENE 121 129497 - 131479 1824 660 aa, chain - ## HITS:1 COG:BH1240_1 KEGG:ns NR:ns ## COG: BH1240_1 COG0608 # Protein_GI_number: 15613803 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Bacillus halodurans # 4 558 5 560 562 417 41.0 1e-116 MIKKKRWRLCKGDQEKENILIRELGVNPIVAKLMVNRHIDVDEGRQFLQGTLSDLLDPFT LKDMDVAVSLVLETIESHKPIVIYGDYDVDGITATSVLYRFLKKLGADVTYYIPERQSEG YGLNLEALEHLIERGTALVITVDCGISSYDIVEAVRDRIDMIITDHHTAPDMIPRAKAVI NHKQKDCPYKDKNLSGVGVAFKLCQALWLTKRGEWYLDDLDIVALGTVADVVPLVGENRI IVKSGLDKMNREPNLGIKKLIDVAGLHERTITSGHIGFTLAPRLNAAGRVTHATRAVELL VTDDEDIVEAIADELNETNRERQELERNIHELARVDVANQGHKADYVTIVAGEEWHPGVI GIVASRLVEEFYKPTLVISIHDGVGKGSCRSIDGFNIYDALKSCEDILLQFGGHAAAAGF SIDANRIDELRERLTKYCKAVITEEEYIPVVAIDAELPVDDIDVDIIDRVSDLEPYGMAN STPVFAIMEATVQDIMLMGQLKNHCKIIFETSSGTLDAIAWNRPDLFKSIFVGTVVKVAF SLQKNEWQGLVSPQLMIQAIEPLTEEPIKLSTEGLRQMYVIIKQSMRGRSQSVYNVEQDI LRRKPADQNNRSALTSIDVFKELGIVEEYTSDDGQLMLRWNAIEGKLDLVTSVTFLTYSV >gi|292596541|gb|ADCV01000007.1| GENE 122 131674 - 133092 1418 472 aa, chain - ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 1 472 1 472 472 672 69.0 0 MYDVKSPKAEEFISHQEILDTLAYAEENKENRELLDAILAKAATFKGLNHREAAVLLECP LPEYKEKLFALAKEIKKAIYGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQD QIREEVIALEAMGHKRIVIESGEDPLNNPLEYILESIKTIYSIKNKNGEIRRVNVNIAAC SVEDYKKLHEAGIGTYTLFQETYNKENYEALHPTGPKSDYAYHTEAMDRAMQGGIDDVGI GVLYGLEHYKYDFVGLLMHAEHLEAVYGVGPHTISVPRICPADDIDVDDFSNAVPDDVFE KIVALIRVSTPYTGMIMSTRESQSMRERGLALGISQISGGSRTSVGGYKEEEKPEDNTTQ FDRSDTRTLDEIVNWLLDLGYVPSFCTACYRAGRTGDRFMALAKSGQIHNCCQPNALMTL NEYIMDYGDEKTKAHGAKVIEQQLENIKNDLVKEKAKAYIAQMKDGERDFRF >gi|292596541|gb|ADCV01000007.1| GENE 123 133418 - 133702 491 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372241|ref|ZP_03855723.1| LSU ribosomal protein L27P [Veillonella parvula DSM 2008] # 1 94 1 94 94 193 100 6e-48 MFTFDLQLFAHKKGVSSTRNGRDSESKRLGVKCHDGSIVKSGNIIVRQRGTHFHPGTNVG IGKDDTLFALVPGKVAFERAGRYNRKVSVYPVEA >gi|292596541|gb|ADCV01000007.1| GENE 124 133715 - 134029 439 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372240|ref|ZP_03855722.1| predicted ribosomal protein [Veillonella parvula DSM 2008] # 19 104 1 86 86 173 100 6e-42 MVSIGIQRNSDGQVVGCHMSGHAGYDEHGFDIVCAAVSALSATAMLGLTQIARQEGEYTN SEGQCDIVLSGTINQSGQDILGTMLLGLEEISRQYPEFVQIHEI >gi|292596541|gb|ADCV01000007.1| GENE 125 134032 - 134343 511 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372239|ref|ZP_03855721.1| LSU ribosomal protein L21P [Veillonella parvula DSM 2008] # 1 103 1 103 103 201 99 3e-50 MYAIIKTGGKQYRVAEGDVITIEKLEAAANESVTFEEVLTVVNDGDVKVGAPLVNGAKVT GTVLEHGKGKKILVFKYKAKSNYRRRQGHRQPFTKVRIESIQA >gi|292596541|gb|ADCV01000007.1| GENE 126 134545 - 135084 705 179 aa, chain - ## HITS:1 COG:ECs2531 KEGG:ns NR:ns ## COG: ECs2531 COG1971 # Protein_GI_number: 15831785 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 1 173 33 204 206 119 42.0 3e-27 MDAFGVSIGKGLTMPVGENGRKVTLAFLFGLFQFLMPLIGWLIGRQFIDVIADWDHWIIF GLLGYLGIAMIREGLSDDDDEDDDDDKQFLGVWEMMMLSVATSLDAMAVGLTFAFLPINV WEASTMIGVITFGISLVGVYLGKFMGRFVGKYADIVGGGVLILIGTKILLQHLGIIGEF >gi|292596541|gb|ADCV01000007.1| GENE 127 135155 - 136582 1768 475 aa, chain - ## HITS:1 COG:XF1125 KEGG:ns NR:ns ## COG: XF1125 COG1530 # Protein_GI_number: 15837727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Xylella fastidiosa 9a5c # 3 473 4 497 497 259 35.0 1e-68 MHKILVNVMREEIRMAVIDEEGQLVDFVLERTDESHMANHMYKGTVKNVLNGMQAAFVDI GGSQNAYLNLQQGKEQKILPRLSVGQQILVQVVKEEMLGKGARVTADVSLAGRYMVLLPY SEGMHISKKITDETMRSKLQELATPYVQEGCGFIIRTAAAKASADEIGRDMEYLWRTWQH VLKRFKVAKSGTDLYSDADFWFRLVRDYAHRNVEEIIVDSDMGESRLLDLLGHGPTSQQI KVTRHRDSTPIFKANHIEPQLEDLISRDINLPSGGSIRIDHTEALTVFDVNSAHYTGKSN KLEDLAFTVNKEAAKEICRQLRLRDIGGIIVVDFIDMKDKEHQQELLKLLGVQAKLDKMK TVVCGISSLGLVEMTRKRARQGLQTLMFDTCPQCGGTGYMLSGRTVYMQIVRRIRELFKS GRIKTNLEIEVHPEVAQYLTKAVLEDLGESIGRKISIVVNPQISREGYSLMAIAE >gi|292596541|gb|ADCV01000007.1| GENE 128 136617 - 137312 892 231 aa, chain - ## HITS:1 COG:CAC1255 KEGG:ns NR:ns ## COG: CAC1255 COG5011 # Protein_GI_number: 15894537 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 9 115 10 123 238 74 35.0 1e-13 MKKLRLALNKGEELRFLSHLDYAQAVERMIRRAEIKMAYSEGFNPHMKISFSSALALGVT AAAEYIDMDVLEDDSLESIMDRLNRVAPPGLEVLDGKEMPEKVKKMMAICNFAIYEVTGP VTDKNADWDALLKPFNEATEISYEKVTPKKTRTIDVKEFVKEPVVASIKDDMVTLTMGIG IYPQGTIKPSEVWNLGKEQYNWPITTSYEIHRKAIMVENEKGRYTPLEINY >gi|292596541|gb|ADCV01000007.1| GENE 129 137284 - 139167 2097 627 aa, chain - ## HITS:1 COG:CAC1254 KEGG:ns NR:ns ## COG: CAC1254 COG1032 # Protein_GI_number: 15894536 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 9 624 9 618 622 671 53.0 0 MIQLDTSWLQHVQKPARYTGGEYNSIVKDHSTVDVTMALGFPDVYEVAMSHLGIKILYGL VNRREDAVAERVFAPWHDMEEEMRKRNIPLFSLETRTPIKDFDVLAFTLQYEMSFTNILN MLDLAGIPMYAKDRDLKFPLLVCGGPCAYNVEPIADFFDIVSLGESEEWGDEFIDLFKAE KAKGFPGGKEGFLCKVAQIPGTYCPALYDVEYTEQGDFKSIMPRFEDVPAAVEKRIIEDV ENVFYPTKPVVPFLDIVHDRAVLELFRGCTRGCRFCQAGMLYRPVREKTPERLLQIAKDT IANTGYNEISLMSLSSADYSKLPELVDMLMEEFKDKQVSVSLPSLRIDSFSIDIAKKVQQ VRKSGLTFAPEAGTQRMRDVINKGVSEEDLLAACTNAFKSGWNTVKLYFMMGLPTETDED LAGIADLAYKVLDLHREITGKRNGSVTVSVSFFVPKTHSPYQWYGQQDVEEIHRKQRYLK SLINNRNISYHYHDGYTGYMEAAFARGDRRLSKVLVEAWKAGCKFDGWTEFFNYETWLKA FSDCGLDPAYYARRTRDFDEPLPWDHLDCTVSKAFLKREWEQAVEAKLTGDCRRAPCKGC NVCPELNTAIIDYKEGGRVEKVTFGLK >gi|292596541|gb|ADCV01000007.1| GENE 130 139223 - 140326 1115 367 aa, chain - ## HITS:1 COG:FN1027 KEGG:ns NR:ns ## COG: FN1027 COG0772 # Protein_GI_number: 19704362 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Fusobacterium nucleatum # 14 362 18 363 366 240 43.0 4e-63 MWRKIWTDSDWTIIICTILLVGIGLTAIGSATHVNHEAIGFGSLVIKQLVFFLANIAVVI GMQFLDYHRIKGWGNMIYVITMLMLIAVMVVGTSALGAQRWIQLGPITIQPSEFSKLLMI ICMAKMLEPRIGKLDTFKSLLMPVLYVGIPILLVFLQPDLGTSLVYIAIFVGMLFISGIK TKLIKIIASVTLFLMPLGWFVLKEYQKQRILVFLNPDIDPFGSGYHIIQSKIAIGSGMIF GKGIFNGTQSQLNFLPENHTDFIFSVIGEEFGFVGCIVVLLLLFMLIYRSIQIAYTCNDN FGMLLATGIGTMFAFEVLVNVGMTIGIMPVTGIPLPFLSYGVSALTTNMLSIGILINIAR QRTKYIF >gi|292596541|gb|ADCV01000007.1| GENE 131 140335 - 141258 1119 307 aa, chain - ## HITS:1 COG:aq_877 KEGG:ns NR:ns ## COG: aq_877 COG2894 # Protein_GI_number: 15606217 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Aquifex aeolicus # 1 210 1 217 262 141 37.0 2e-33 MGEIIGVVSGKGGVGKTTITACLGSALSNAGHHVLLCDGDFGLRDLDLVLGVANEIIYDA LDASKDKDYMDDAIVSIAENLDFLPASQSARWEDIGRKKYKKLVRRLCEEYDYILIDAPA GIGKGIEAILELVNRCIVVTHPLWVSLRNGARMIQVCQEHNIRDYAIAFNAVPIDGEDIN LYDMLDVLRAEYVGAIIPYDEDVLTYTQDGRLLEFVSSELKAVLAPLVDYVTTGDCWEDY DVQKHFDAYVTKKKASKEQDNIPSLATVGESIFEDSNNVHYINRGGWTTQRLLVQGKQSL WRRSKLK >gi|292596541|gb|ADCV01000007.1| GENE 132 141260 - 143086 2169 608 aa, chain - ## HITS:1 COG:alr5045 KEGG:ns NR:ns ## COG: alr5045 COG0768 # Protein_GI_number: 17232537 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Nostoc sp. PCC 7120 # 3 565 45 590 610 315 35.0 2e-85 MSLQILSGGYYQAKAEGNRLRMVSMTAARGIMYDRNGQILVGSRPAYTISILPTGKALDE GEVAKLATLLKIKPEDITKKVNDHKYGYEPIRIANDISMDVVTSIEEHRHELPGVTIDVE PLRYYPYETMASQLFGYVGEVSEEELEELKQQDPNTLISGGTILGRSGLEKLYDSILRGT DGGKQVEVDATGRPVAEVDRKHTVPGSNIHLTIDANLQKAAEEAVKNQLEQLRAQGIPAQ GAAVVAMDPNTGAILAMVSAPEFNPNWFAKGITTAQWNQLNNDKNHPFDNKVISGEYPPG SPFKIITGTAALDLKKVTPEEMIFDSGKHWLIDKRNAEGEALGWLNFNKALAKSDNVYFY EMGNRVGIEGLVKYAGYFGIGEKTGINLVGEASGNMASPAYKRKVYDEDWYLGETFDAAI GQSFTLVTPLQMAVMLSEVANGGIKYRPYVVSRIDNKDGTPKEIFGPDKLGILPVPKNIM DLVREGLRDVTNEGGTAGELFKGFPIDVAGKTGTSENAHGRDHGWFVAYAPYDKPQIVVV ALVEQGSFGAGSAGPIVRDILAAYFNVPVNKKSNDTNSKSNKETATGTSINKGQKPQNAV TSGQPRKD >gi|292596541|gb|ADCV01000007.1| GENE 133 143202 - 143696 360 164 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1225 NR:ns ## KEGG: Vpar_1225 # Name: not_defined # Def: rod shape-determining protein MreD # Organism: V.parvula # Pathway: not_defined # 1 164 1 164 164 276 97.0 3e-73 MMRLALVLSGFLIYFIQAQLLPTIFHTNWLPNLILTIIVMITLFKGRRMGLISAVVGGIV HDVLISNFFGLHLFPYVIVVYLLSAVKHRIYEERWYWSSGIVAICTLLDGVIRSFMILAS GGDLHFGLYLWHMVLPVMFWNGLLGAIVHGLLWRKDDEQQGYIW >gi|292596541|gb|ADCV01000007.1| GENE 134 143693 - 144610 1146 305 aa, chain - ## HITS:1 COG:CAC1243 KEGG:ns NR:ns ## COG: CAC1243 COG1792 # Protein_GI_number: 15894526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Clostridium acetobutylicum # 9 276 10 279 283 114 27.0 3e-25 MIQSDKKLIIIVVIGCILMALLGFAWKQRTSIPFVTVTLEGITTPFSYGSARLLEGVQTS FTVLNNAIFSTIEREEEASRKATLEQKVVNYDEVVAENIRLRQLLNYKSSHPEFSMTLAG IITKDYGTWTNTFTIDKGSEEGMAVNMAVVVPSGVVGFITDVYPHSARVQTILDPRSAIG ILVQRPESRLSGVVKGNGNTPRTPSMVNIARDGDVLVGDKLITSGYGGIYPKGLPVGNVQ SIENDSEGFVKNAVVTPSVDFHRLEEVFVLTSSSLSAPQKPELEPKLVPQTQRDQVEGAK GAVKQ >gi|292596541|gb|ADCV01000007.1| GENE 135 144612 - 145649 1361 345 aa, chain - ## HITS:1 COG:BS_mreB KEGG:ns NR:ns ## COG: BS_mreB COG1077 # Protein_GI_number: 16079855 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Bacillus subtilis # 9 324 6 325 337 229 39.0 6e-60 MSSILPTLGKDVSIDIGSIQTRLMGGTRGTVISEPSIIATDTKQEKVVAVGDEAARLVLR MPDMWRPLTPLKDGFIVDYRVMHTMLSYFLNKVSNALRRARVVVGVPCGMTDVEQRAMMD AVIQAGAREVFLIERPVAAAIGCGVPIFEAQGSMVIDIGGGTIDMGIVSLGGIVDSKTIR FGGSDINNALLRYVRECFGVIVSDETILDIKHTLGTAIAPLEDAEYAFQGRDMMNGLGRR CVIHQSEVYQVVNECLIGLLDEVKQMIRATAPEIVADIMQHGIWLTGGTARLSGLADRIG TEVGVPVHVPEAPETKVVVGLNGASSDLVSLSRFIVNSKNRKGRD >gi|292596541|gb|ADCV01000007.1| GENE 136 145929 - 146627 609 232 aa, chain - ## HITS:1 COG:BH3032 KEGG:ns NR:ns ## COG: BH3032 COG2003 # Protein_GI_number: 15615594 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Bacillus halodurans # 5 231 5 229 232 163 38.0 3e-40 MEVPTVSVKDMLPFQRPREKFLALGPSHMAMEELLAILLRTGVKGQSAISLASDIVQSFD DGVYGLNRMTVDNLIKIKGIGRDKAVTLCAALEMGRRLGELKIKETYEDFSQPFVIAQYV MERLRHEDVEHVWAAMLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIH NHPSGDSRPSDEDIRLTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKLS >gi|292596541|gb|ADCV01000007.1| GENE 137 146810 - 147376 553 188 aa, chain - ## HITS:1 COG:BS_maf KEGG:ns NR:ns ## COG: BS_maf COG0424 # Protein_GI_number: 16079857 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Bacillus subtilis # 4 174 5 175 189 154 47.0 1e-37 MAGLYLASQSPRRTELLTQVGIDHTVVSSTYEESNEGYDNPIEMVKAQALGKARCAVGVP DGSIVLGADTIVVLDNKVLGKPHDESDARHMLEHLSGRAHSVITGVALLIKGEEIVFHNE TKVYFKQLAPFEIESYIASGEPMDKAGAYGIQGKGALWVDKIEGSYTNVVGLPVEHVYDE LCKALGAK >gi|292596541|gb|ADCV01000007.1| GENE 138 147463 - 148083 541 206 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1230 NR:ns ## KEGG: Vpar_1230 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 206 1 206 206 365 95.0 1e-100 MTVLYKEKSQRTRSAELLVVFFVILLLCAAAYTTYRSIQLHTVLLAEYFIEIMAIIVMVK QAVSRYTYILTDTKLVIEEHSIFRNRHFEVDYNMIDGVFKFERELLTNIKYRYKYRKCST SDPRPIWSLVYSIVDGNKVKNGRLLLKADDRFFEILEEHVPGRIRVPQADIVFYAAVRAD AVKHGEDVQEYYERLISSEEDKGTTM >gi|292596541|gb|ADCV01000007.1| GENE 139 148236 - 149441 1729 401 aa, chain - ## HITS:1 COG:MA3606 KEGG:ns NR:ns ## COG: MA3606 COG0282 # Protein_GI_number: 20092406 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Methanosarcina acetivorans str.C2A # 1 395 1 395 408 509 61.0 1e-144 MNVLVVNCGSSSLKYQLLDMTTETELAKGLFEKIGDQDAIFTHKRPNADKLERIEPILNH KEALRILLDILVDAEFGVISSMDEIDAVGHRVVHGGEKFADSVLITPAVMEALEECASLA PLHNPPNIQGIEACEAIMPNVPQVAVFDTAFHQTMPKEAYMYALPYSYYEDYGIRRYGFH GTSHKYVAQRCAELMGKHMTDLRIITCHLGNGSSVAAIKGGRSIDTTMGFTPLSGLIMGT RTGDIDPAIVPFLMEKTGMTYEEIDRVMNKESGVLGISGVSNDFRVIEEAAANGNKRAQL ALNMFHYKVRRVIGAFAAVMGGVDAIIFTAGIGENGIGNRDAICNGLEYLGTRIDSERNN VRGKEQEISVEGSKVKIFVIPTNEEIMIARDTQRITAALKK >gi|292596541|gb|ADCV01000007.1| GENE 140 149445 - 150008 542 187 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1232 NR:ns ## KEGG: Vpar_1232 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 187 1 187 187 330 87.0 2e-89 MKQNWKRTLQGALLGAVLLAMAGCGSTNVMDTYSFGHQVIRAGQSEITIALPYEMGKSTK NMSDKGYPIDIYGSVTEHMVIEVEALRPGENKPLPTVDEYINHSKSEFAKVGATIKEESV ALEGASAKKLDVTVTSQGQIFRISQYVFLDHGVLWNIVYQYPEKDQVGADISKEIQNKIQ VTQQKEG >gi|292596541|gb|ADCV01000007.1| GENE 141 150195 - 151544 1059 449 aa, chain + ## HITS:1 COG:CAC1741 KEGG:ns NR:ns ## COG: CAC1741 COG1323 # Protein_GI_number: 15895018 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Clostridium acetobutylicum # 1 399 1 363 402 147 28.0 6e-35 MKTIGIICEYNPFHNGHAHQLHTLAQEHPEALRICIMSGSFVQRGEPAIFSKFDRARWAI LGGADIVIELPTLYSLGSAQLFGTGAIRMVKALHIDALSFGSETADLDTLVDITKRMDCE STQTVLRTYINEGMSYGSAFRKALNTEMLNTPNALLGLEYIRAGLTYYPSLKYIPILRTS DHHDANITKDFPSGTALRKLITNMATGSNNCNKNSIYTSTDIDTTTSASTNTNTNTNTTS NSNSNSTATTLTKLNTLNSKIELQLQSIIPKTIADDMTNIISNGAYVNYNRYYDIIHSLS RRTSTTKLESFGEFNEGIEHLWSKAAQQPTWNLAMEHIKSKRYTYARLQRMGAYLALGIQ KDVLQNAMQEGPQYARLLAFNDRGRQWLRNDFEIPLIQKWAKAPNELNTLGQTMHQIDTL ATDIQALCLHNEVKRMGHMDYTYTPQYIK >gi|292596541|gb|ADCV01000007.1| GENE 142 151669 - 152190 616 173 aa, chain - ## HITS:1 COG:BH2541 KEGG:ns NR:ns ## COG: BH2541 COG2065 # Protein_GI_number: 15615104 # Func_class: F Nucleotide transport and metabolism # Function: Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase # Organism: Bacillus halodurans # 5 173 3 177 180 172 54.0 3e-43 MEKKRLLMDQDAIMRAIRRISHEILERNKGLSNALIVGIERRGVILAKRLQAEIERIEGI HIDCESLNVAVYRDDRDARPKEGEPCTIDTTEKTIILVDDVLYTGRTIRAALNALMTAGR PRSIQLAVLVDRGHRELPIRADYVGKNIPTSHLESVRVAVADLDGEEGVTIQE >gi|292596541|gb|ADCV01000007.1| GENE 143 152284 - 153207 288 307 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 38 286 40 279 285 115 32 2e-24 MNEYIVSAEQEGMRLDVFLTEQMEGSRSYIQSLIKGGHVTVGDKVGKANLRLTPDTVIHV EIPEPESIEVKPEDIPIDYLYEDHDIVIVNKPRGMVVHPAVGNYSGTLVNALLFHCKDLS GINGEIRPGIVHRLDKDTSGVMMVAKNDAAHIGLAEQVKVHSARRTYWALVQGNIVEEKG TIKAPIGRHPKDRMKMAVVFENSKDAVTHFKVLERYGHQTLVECNLETGRTHQIRVHFAH IGHPVVNDPFYGYRRMDFPIEGQALHSKSLDVKHPITGEEMHFEAPVPADFEACLEFAKT YREDKRK >gi|292596541|gb|ADCV01000007.1| GENE 144 153294 - 153734 374 146 aa, chain - ## HITS:1 COG:BS_lsp KEGG:ns NR:ns ## COG: BS_lsp COG0597 # Protein_GI_number: 16078609 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Bacillus subtilis # 1 134 2 139 154 97 39.0 1e-20 MFYTVLIIWLLLDQLTKYYVMNHFLLGESLPVIPNVFHLTYIINRGAAFGMLANQRWFFL LVAFVLLAVCAFYWKRLAKGHWTLQIGSALLVAGAIGNGIDRYMIHGVVDFFDFRVWPIF NVADIGICIGVAFVVFYLFSLKEDHE >gi|292596541|gb|ADCV01000007.1| GENE 145 153843 - 154007 176 54 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1237 NR:ns ## KEGG: Vpar_1237 # Name: not_defined # Def: 4Fe-4S ferredoxin iron-sulfur binding domain protein # Organism: V.parvula # Pathway: not_defined # 1 54 1 54 54 65 100.0 8e-10 MRVIADGCIKCGSCASVCPVSCITEGETKYEIGDACIDCGSCESVCPVSVISAE >gi|292596541|gb|ADCV01000007.1| GENE 146 154499 - 154762 419 87 aa, chain - ## HITS:1 COG:no KEGG:SGO_1740 NR:ns ## KEGG: SGO_1740 # Name: not_defined # Def: integral membrane protein # Organism: S.gordonii # Pathway: not_defined # 1 87 1 87 87 128 74.0 6e-29 MTKERFNMLVGSIGAFIGVFVFLAYIPQIIANLHGQPSQPWQPLFAAVSCLIWVLYGWTK SPKRDYILIVPNLAGVILGTLTFLTSF >gi|292596541|gb|ADCV01000007.1| GENE 147 155003 - 156304 1680 433 aa, chain - ## HITS:1 COG:STM3356 KEGG:ns NR:ns ## COG: STM3356 COG0471 # Protein_GI_number: 16766651 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 7 431 7 422 422 303 46.0 6e-82 MGTAEQTLIVLAVMAVLFVTEIIPLAITSLGGAITLGLMGIITPKVVFSGLSDSTVVLFA GMFVVGAALFYTGLAQKIGETVVSHAGTSENGLMLAIMLVTATMSAFLSNTGTTAALLPV VVGICAVAKIPASRQLMPLAFAAGIGGIITMVGTPPNIIVSGTLTKFGIEPFGFFEFAWI GIPLTIATIVFMMLIGKHLLPKHEITDAGDVEQEVAAEDISNDPKKQLFSGLILLGVILA MILGEPLKEHFGINLPLSMVAVIGAMLCVLTGCLNEKQAYTSIDWVTIFLFAGMMPVATA LDQSGAGKMIADAVIGVMGSDPSPYFATGVLFILSCVMTQFMSNTASCALLAPIGISIAQ GMGADPHAVLMAIGVAASCAFGTPVGTPPNTLVLGPGQYKFTDYVKAGVPLILVCFVVSL IIIPMVWPFFPGK >gi|292596541|gb|ADCV01000007.1| GENE 148 156343 - 156600 65 85 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1239 NR:ns ## KEGG: Vpar_1239 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 85 1 85 85 139 100.0 2e-32 MLSIELKILICFVWAFIVFFITALIIGAEGKAKWFQQRTKYSWFNRRGFLGETLLFGYPK TREGYGITFIMASAIGIVGYILYLL >gi|292596541|gb|ADCV01000007.1| GENE 149 156794 - 157915 1381 373 aa, chain - ## HITS:1 COG:PH1283 KEGG:ns NR:ns ## COG: PH1283 COG1883 # Protein_GI_number: 14591096 # Func_class: C Energy production and conversion # Function: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit # Organism: Pyrococcus horikoshii # 3 370 2 399 400 354 56.0 1e-97 MEAFAVAIQSVINDSGFLAFTTGNAIMILVGLILLYLAFAREFEPLLLGPIAFGCLLANI PRNGFEEGVMALISAGISQEIFPPLIFLGVGAMTDFGPLIANPKTLLLGAAAQIGVFAAL GGAMMLGFTAQEAAAIGIIGGADGPTSIYLATKLAPHLLGAIAVAAYSYMSLVPLIQPPV MKLFTTQKEREIVMEQLREVTRFEKIVFPIVATIFISLLLPSITSLLGMLMLGNLFRESG VTDRLSDTSQNALINTVTIFLATGTGLTMSAEHFLSLETIKIILLGLFAFICGTAGGVLF GKLMSLVDGGKTNPLIGSAGVSAVPMAARVSQVVGAKANPANFLLMHAMGPNVAGVIGTA VAAGTMLAMLSNH >gi|292596541|gb|ADCV01000007.1| GENE 150 157986 - 158369 732 127 aa, chain - ## HITS:1 COG:PAB1771 KEGG:ns NR:ns ## COG: PAB1771 COG0511 # Protein_GI_number: 14521093 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Pyrococcus abyssi # 3 127 23 145 145 72 44.0 2e-13 MKKFNVTVNGTAYDVEVNEVKAAAPAAAPKAAPAAAPAPKAAPAPAPAAAAAPVPAGAET VKAPMPGKILSVAVSAGQAVKKGETLLILEAMKMQNEIAAPHDAVVSEVRVSANQTVSTG DDMVVLG >gi|292596541|gb|ADCV01000007.1| GENE 151 158471 - 158638 294 55 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1242 NR:ns ## KEGG: Vpar_1242 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 55 1 55 55 98 98.0 7e-20 MSNATTTNGKAPSQDVVAVIVGALAAMGYSADQIAHIRPIVSYNWKMEGRLRGNR >gi|292596541|gb|ADCV01000007.1| GENE 152 158662 - 159009 433 115 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1243 NR:ns ## KEGG: Vpar_1243 # Name: not_defined # Def: sodium pump decarboxylase, gamma subunit # Organism: V.parvula # Pathway: not_defined # 1 115 1 115 115 158 99.0 7e-38 MEGQAVTTNPWLIMAINMTVVFAVLIALGILMEIVHLIDPTRKKKEAPAATAPVATPTAT PVAPANASAQNEDEVVAAIVGAIVAMGYSSEQIASIRPTATSAKWRLEGRLSGRG >gi|292596541|gb|ADCV01000007.1| GENE 153 158969 - 159064 71 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINQGLVVTACPSIIIPLSKKVVKKGISQIR >gi|292596541|gb|ADCV01000007.1| GENE 154 159083 - 160612 2030 509 aa, chain - ## HITS:1 COG:AF2217 KEGG:ns NR:ns ## COG: AF2217 COG4799 # Protein_GI_number: 11499799 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Archaeoglobus fulgidus # 5 509 3 516 516 650 62.0 0 MATVQEKIELLHEKLAKVKAGGGEKRVEKQHAQGKMTARERLAKLFDDNSFVELDQFVKH RCVNFGQDKKELPGEGVVTGYGTIDGRLVYAFAQDFTVEGGSLGEMHAAKIVKVQRLAMK MGAPIVGINDSGGARIQEAVDALAGYGKIFFENTNASGVIPQISVIMGPCAGGAVYSPAL TDFIYMVKNTSQMFITGPAVIKSVTGEEVTAEDLGGAMAHNSVSGVAHFAAENEDDCIAQ IRYLLGFLPSNNMEDAPLVDTGDDPTREDESLNSLLPDNSNMPYDMKDVIAATVDNGEYY EVQPFYATNIITCFARFDGQSVGIIANQPKVMAGCLDINASDKSSRFIRFCDAFNIPIVN FVDVPGFLPGTNQEWGGIIRHGAKMLYAYSEATVPKITVITRKAYGGSYLAMCSQDLGAD QVYAWPTSEIAVMGPAGAANIIFKKDEDKDAKTAKYVEEFATPYKAAERGFVDVVIEPKQ TRPAVINALAMLASKRENRAPKKHGNIPL >gi|292596541|gb|ADCV01000007.1| GENE 155 160763 - 161185 684 140 aa, chain - ## HITS:1 COG:PH0272 KEGG:ns NR:ns ## COG: PH0272 COG0346 # Protein_GI_number: 14590197 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Pyrococcus horikoshii # 1 138 1 134 136 124 49.0 7e-29 MAFKVLQVDHIGIGVNDLAATKEFYKNALGIEHLPEDEIVEEQKVKVSFFPCGDAELEFL ETTTPDGPIGKFIEKNGGRDGIQHVALRVDNIENAIADLMAKGVRMIDEKPRYGAGGSSI AFLHPKATGGVLLELCQRMK >gi|292596541|gb|ADCV01000007.1| GENE 156 161237 - 162175 1134 312 aa, chain - ## HITS:1 COG:PAB2398 KEGG:ns NR:ns ## COG: PAB2398 COG1703 # Protein_GI_number: 14520467 # Func_class: E Amino acid transport and metabolism # Function: Putative periplasmic protein kinase ArgK and related GTPases of G3E family # Organism: Pyrococcus abyssi # 2 311 4 315 324 294 49.0 2e-79 MDLVKGLFEGSRLALARSITAVENEYDNAIDIMKAIYPKTGNARILGITGAPGAGKSTLT DKVVKHYLDQGKKIGIVAIDPTSPFSGGAILGDRIRMNDLTLNENVFIRSMGTRGSLGGL SKKTADVVKLMDAFGMDLVIIETVGVGQSEVDIVKNADTTLVVLVPGLGDDIQAIKAGIL EIGDVFAINKADRDGCDRLNVEIEMMLDLDSREVKWRPPIKRTIASKDQGVDELIDALDE HFEYLEDSGELESRRAERTRDEIIAMINEQIGRYVADKIVTSDEFNSQVAAVNERESDPY TVVNGVMTSVLK >gi|292596541|gb|ADCV01000007.1| GENE 157 162254 - 162649 712 131 aa, chain - ## HITS:1 COG:DR2032 KEGG:ns NR:ns ## COG: DR2032 COG2185 # Protein_GI_number: 15807026 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) # Organism: Deinococcus radiodurans # 3 131 5 133 142 166 62.0 1e-41 MAEKRIRVIVAKPGLDGHDRGAKVVARALRDAGFEVIYTGLRQTPEQIVEAALSEDVNVV ALSLLSGAHNTLFPKIVELLKEKGMGDVLVIGGGVIPDADIPGLKKAGVAAVFTPGTPTS DIVNFIKENVK >gi|292596541|gb|ADCV01000007.1| GENE 158 162678 - 164324 550 548 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163787732|ref|ZP_02182179.1| ribosomal protein L11 methyltransferase [Flavobacteriales bacterium ALC-1] # 52 542 579 1134 1138 216 30 8e-55 MAYENLKAQIAEYNKLCDEKCAKTPERQNLKYNRVYTPVDIEGFDYERDLGMPGEFPYTR GVQPTMYRGRFWTMRMYAGFATAEESNKRYRYLIESGATGLSCAFDLPTQIGYDSDDVMA EGEVGKVGVAIDSLADMEILFDGIDLGKVSTSMTINAPASVLLAMYIAVAEKQGVPSTEL KGTIQNDILKEYAARGTYIFPPKPSMRLITNIFEYCSQYVPKWNTISISGYHIREAGSTA AQEIAFTIADGIAYVEAALKAGLDVDTFAGRLSFFWNAHNNVLEEVAKFRASRRLWATIM KERFGAKKPKSMMLRVHTQTAGSMLTAQQVDNNIVRVALQTAAAVMGGTQSLHTNSRDEA LALPTEASVQVALRTQQIVAYESGLADVVDPLGGSYYVEAMTNAIYDEAMAYIKKIDEMG GAVVAIEKGYIQKEIQESAYKWQMEVESGLRTIVGVNKFQVEEEAPKDLLRVDASVGANQ SKKTQAVRANRDQAAVDKALADLKAGAADESVNLMPLILAAVKTYATLGEICNVLREVFG EYEAHSTL >gi|292596541|gb|ADCV01000007.1| GENE 159 164353 - 165858 1537 501 aa, chain - ## HITS:1 COG:CC3724 KEGG:ns NR:ns ## COG: CC3724 COG0427 # Protein_GI_number: 16127954 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Caulobacter vibrioides # 14 500 21 513 514 525 52.0 1e-148 MVIDIKDRVKNVDLQGKIVTAYDAAQLINPNDKVGISGFTPSGYAKVVPLALAERMEKEP FKIDLWTGASVGDEADGALTRANGINRRFPYQTNKDMRKALNSGDVKYIDMHLSTMAQNI RYGFFGDLDVAIIEVCQINEDGSLVPTTSVGNSPTFVSQAKKVIVEVNVSQPLSLVGMHD IYEPLDPPHRKPIPLEQSGDRIGTEAIPCDPSKIIAVVPSDVPDTTRPLAAIDDDAKAMS QHLIKFFEQEIAEGRLPKNLLPLQSGVGSVANAVISGLAQGPFTDLSIYTEVIQDGMFDL IDAGKVTVCSGTALSPSPDGLKRFYANIDEYRKKIILRPQEISNNPGIARRIGVIAMNTA IEFDIFGNVNSTHIMGSKMMNGVGGSGDFARSAYLTIFCTNSVAKNGDISSIVPYVSHVD HPEHDTMIFCTEQGVADCRGLSPVERARLIIEKCAHPDYKPMLTEYLEKALAATKNAHTP MLLDEALSWHKRFTETGSMKK >gi|292596541|gb|ADCV01000007.1| GENE 160 166383 - 167621 1048 412 aa, chain - ## HITS:1 COG:all5073 KEGG:ns NR:ns ## COG: all5073 COG3307 # Protein_GI_number: 17232565 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Nostoc sp. PCC 7120 # 108 401 144 453 475 85 28.0 2e-16 MELSLIPNQKRLTFYIERLIYGVVIAMPLQPMVGDVLLWLAIGLALYDLISSKSLSLPTG YLSWTVMIFVIWTGISSLMSPNWDWSIQSWFYQIVAGGGMYYLVRTYIRTPKQWNYFLRA FLGTAVLVCIIGAYQYIFVPNIHIKEWVDAAQFPKLMRRMASTLQNPNLLGAYLLMVLSV CISYILVYMKENRTREVVTMLIIGVVLFLTMLLTYSRGIWISFAAMILYWAIFVERRLFL SLLVVPLILYFYEGEVASRLWSIFQGHDTSSDLRWALWDSTMYIVRENPIFGIGWNTFYL VYPEYNYYIQGPNVLMYHAHNLYLNILAETGIPGLLSFLAVIVGHVITSVRLKGDMFRQA AQIGIGALAIGVLFSGLSDFELYSHQVTIVFWQLLGWVGAFVKVQLSTKAHM >gi|292596541|gb|ADCV01000007.1| GENE 161 167631 - 168938 1600 435 aa, chain - ## HITS:1 COG:TM0166 KEGG:ns NR:ns ## COG: TM0166 COG0285 # Protein_GI_number: 15642940 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Thermotoga maritima # 1 429 1 419 430 271 37.0 3e-72 MTYQEALAYLEQASSFGIKPGLERITALMDVLGNPQEDYKIVHVTGTNGKGSVTSYISYA LFTSGLRVGRFTSPHLQSYTERIQINDGNITEEAFGKLISRVKVAVDTIINNGIEAPTQF EILTAAAFLFFKEQGVDYAVVEVGLGGLLDSTNIVTPKVSVITNVTIDHQAYCGDTVEEI ARHKAGIIKPKVPVVTAAQDTPLNIIEDVAKKRHAKLYVFNKDFGIDSRSAVTGGQMITI SSNDAAPAMLFTTMAGIHQSVNLACALMAVRLLMKEDTNISEETMREGFARTTWAGRFEV KRGLDRTFIFDGAHNAAGAESFAMTYNELFKDTPKTVVMAILKDKDQEAIIREVIKSGDT VLAVPAPTDRTEVPENLVEVIRRTVPKVTAQTAESVEAALALAYKHTKTGDIIAVCGSLY ILGDARQWFFHEMSH >gi|292596541|gb|ADCV01000007.1| GENE 162 168951 - 171608 2977 885 aa, chain - ## HITS:1 COG:CAC2399 KEGG:ns NR:ns ## COG: CAC2399 COG0525 # Protein_GI_number: 15895665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 883 1 881 881 1030 55.0 0 MKTYENLTTYNPGEIEGKWYSYWENQGYFHEEVDTNKEPFSIVLPPPNVTGMLHMGHALD NTLQDILIRFKRMQGYNVLWMPGTDHAGIATQIKVEEMLAKEEGKSRYDLGREKFVERVW EWKKEYGDTIVKQIRSLGASCDWNRERFTLDEGYYHAVREVFVSLYEKGLIYRGERIINW CPRCATALSDVEVEHEDEHGHLWHIKYPVKGEDNRFVVVATTRPETMFGDVAVAVNPDDD RYKDLIGKTLILPFVNREIPVIADDYVDASFGTGCVKITPAHDPNDFEMGQRHNLESIVV MNNDATMNEGAGKFNGLPREEARKQVLAELKELGLLEKIDDHDHAVGHCSRCNTIIEPMV SKQWFVDMKPLAEPALKVVKDHEVEFVPERFTKTYVNWLENIRDWTISRQLWWGHRIPAW YCDDCGETIVSREDITECPHCHGHVTQDPDVLDTWFSSGLWPFATMGWPKQTPELKQWYP TSVLVTGYDIIFFWVARMIFMALEFEHEIPFKHVFIHGLVRDSQGRKMSKSLGNGINPLE VIDQYGADALRFTLVTGNTPGNDMRFYMERVEANRNFANKIWNASKFVLMNLTNYDESFV PTADDLTLADQWIVQKYNETVQSVTSNLDKFELGEAASSVYDFIWNTYCDWYIELAKPRL YSESNERDRRTVQYLLVTILRHMLELLHPFMPFVTEHIWQHLPHEGDSIVVTKWPGALKF DNLEGAARQMEVMMDAIKGIRNMRAEMNVPLGKKAEVIVAPTDEALAKTVAEHSDYFVTL AWAEKVTILSIDDPKPENATVTVVNGMEVYLLLKDLIDGEKERERIAKEKIQMEKEISRL EGKLSNQGFLAKAPEAVVAKEKEKLEEYKQKQQALLEREAFLETL >gi|292596541|gb|ADCV01000007.1| GENE 163 171629 - 172519 526 296 aa, chain - ## HITS:1 COG:aq_1267 KEGG:ns NR:ns ## COG: aq_1267 COG0805 # Protein_GI_number: 15606489 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Aquifex aeolicus # 70 289 1 226 240 147 41.0 3e-35 MEPFEPKSDFEYPMQKPSFDSVVRQKRREAEQKSEQERYKVATQHISEDVEDEPVYTAIE QKMMGEARELSLVGHLSELRKRLIIIAVAVIVGTCISYYYVDLLLEILLKPAGKLYYMRP TEAFFTYMKVSVVGGLVIAAPIILHQIWLFVKPALTVREKQLSNWILPVAIGLFGIGIVF SYFLVLPAAVKFFMGFATDELQPMFSIGQYMDFVLSFVLPFGFIFELPLILIILGYFNLI TSRFLKTKRKIFILISFIIGAVISPTPDMFSQTMIALPMILLYETSLFVLAKIMKR >gi|292596541|gb|ADCV01000007.1| GENE 164 172521 - 173492 1084 323 aa, chain - ## HITS:1 COG:BH1653 KEGG:ns NR:ns ## COG: BH1653 COG0142 # Protein_GI_number: 15614216 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Bacillus halodurans # 42 322 39 322 323 168 34.0 1e-41 MSQMNELEIMERIALDLEHVEESLASSFNTGAEDFNALIRPLSAAGGKRLRAQLCLLIAN AGTSIERQRIKIAEAVEMLHLATLIHDDVLDQAEIRRGEDTIHMHKGNKVAILSGDYLFA KAFKIVSEMTNMKYLQVFSHIITCLVEGEFMQMEDVYRIDQGIERYMTKTQKKTADFMEG CMELGGLLGDWQESEIIELKKYGHALGMAFQITDDIMDYRETAETTGKPVGNDLREGLLT YPLLSIVNDGNKDKLLEEIKGLNNGGNEQDIIDYVIAQGGIDNTLAVADKYCKDALAALA AVRDFPGKEFLVMAVENLADRKV >gi|292596541|gb|ADCV01000007.1| GENE 165 173489 - 174187 469 232 aa, chain - ## HITS:1 COG:NMA0656 KEGG:ns NR:ns ## COG: NMA0656 COG0218 # Protein_GI_number: 15793641 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Neisseria meningitidis Z2491 # 30 215 7 184 209 121 37.0 9e-28 MQKKKKSTKPMDPKPQYTRKEPKGPRIIAAKYNTSCVKADQYPEGDTVEIAFLGRSNVGK SSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISETEECRYNWFLVDLPGYGFAKT NKGNRNLWSSFIADYILHSERLMLLCLLIDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKA DKLTAKEKSANLSIIKELYPTATPPILYSSLKHTGRELLQQRINKILVGDEA >gi|292596541|gb|ADCV01000007.1| GENE 166 174187 - 176496 2795 769 aa, chain - ## HITS:1 COG:BS_lonA KEGG:ns NR:ns ## COG: BS_lonA COG0466 # Protein_GI_number: 16079872 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Bacillus subtilis # 4 769 5 770 774 753 51.0 0 MNLLEVGIPTVPLRGMVVYPNIVIHLDIGRDKSIKAVEAAMNEDRILAVVTQKDDAVDAP TVHDLAQMGTLVKIKQMLRLPGGIVRVLVEGITRIRLMNITSMDPYYIGDYERVASEFED DVELEAYRRLVQAKFGEWAEEAKSVTDEGVTRVMELRNPCELADQVAFLLPINNLKRQEL LEELSVARRLNMIVGILNMELQISDLENSINNQVRQSMEKAQKEYFLREKIRVIHDELGD KGDPEEEAEELRVKLKALNLSEDVHTRIDKEISRYSRMPQLMPEATILRNYLDWVLALPW NELTEDRLDIKGAHAMLEADHYGLEKVKKRILEFLAVRKLTGKNSGSILCLVGPPGVGKT SLATSIAKAMNRKFIRASLGGVRDAAEIRGHRRTYIGALPGRMIQGLKNVGTKNPVFLLD EIDKLASDYKGDPSSALLEVLDPEQNSTFSDHFIEVPFDFSEVFWITTANVASNIPGPLL DRMEIIELSSYMEEEKLEIAKRYLTPKQIKKNGLEDYKVKLSDAVLRKVISEYTREAGVR TLEKTIAKICRKIAFKVVEEGGDAPKVTTKNLHEFLGAPIFVDQEREKKAQVGYVNGLAW TSVGGVVLPCEATTMNGTGKLALTGSLGKVMQESGQAAMSYIRHNAKALKIEEDFYKKLD IHVHLPEGATPKDGPSAGITMTLAMVSILTNRKVRSDIAMTGEITLRGRVLPIGGLKEKL LAALSHGIKEVLIPKGNEKDIAELPDIVKEGLIITPVKTMDEVLAKALV >gi|292596541|gb|ADCV01000007.1| GENE 167 176562 - 177815 275 417 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 150 380 248 432 466 110 33 6e-23 MAKDKDTMRCSFCGRTSEEVRKLVAGPNVYICDECVEVCERIIADELGAVETDDFNLKEL PTPREIKAHLDEYVIGQDDAKISLAVAVYNHYKRLQTDNVVDDVELQKANVLFIGPTGSG KTLLAQTLAKMLEVPFAIADATSLTEAGYVGEDVENILLKIIQAADYDIARAERGIIYID EIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPNQEMLQIDTTNIL FICGGAFDGMDKVITKRTAKKTLGFGADVQRKEERNVSAILKDVVPEDLLKFGLIPEFIG RLPVMVTLDQLDRDALIQILTKPKNALTKQYEKILSLDGVELTFTEDALEEIADEALQRK TGARGLRAIIEKVMKRVMFEVPSMPEVTKCIVNRESVLSTGEPILKNEADQDIQLKS >gi|292596541|gb|ADCV01000007.1| GENE 168 177828 - 178421 708 197 aa, chain - ## HITS:1 COG:BH3564 KEGG:ns NR:ns ## COG: BH3564 COG0740 # Protein_GI_number: 15616126 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Bacillus halodurans # 3 189 4 190 194 285 73.0 4e-77 MYVPIVVEQGERGERSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIH LYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIM IHQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAV EYGLIDEVLTREPVESK >gi|292596541|gb|ADCV01000007.1| GENE 169 178458 - 179762 2124 434 aa, chain - ## HITS:1 COG:BH3053 KEGG:ns NR:ns ## COG: BH3053 COG0544 # Protein_GI_number: 15615615 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Bacillus halodurans # 15 429 15 429 431 306 47.0 4e-83 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRILEMNFGK EAILEEAFEVLASQNYSAALRENDIVPVSEPEIEREQFEEGKDLIFKATVTKRPEVKLGD YKGLEAEKQDATVSDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDFAGSVDGKPF DGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAGKEAEFKTHI HDIKRKELPELNDEFAKEASSYETIEELKKDLRTKMEEEASRRAIDTYNADLIQTAVKNA TVEIPEVMIKDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKDSAAENVRAD LVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAKEGRVAMLAGSVARKKAA RFIIDNAKGAEAAE >gi|292596541|gb|ADCV01000007.1| GENE 170 179926 - 180381 698 151 aa, chain - ## HITS:1 COG:alr3813 KEGG:ns NR:ns ## COG: alr3813 COG0517 # Protein_GI_number: 17231305 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Nostoc sp. PCC 7120 # 3 148 5 150 152 93 34.0 2e-19 MKIQEVMNKYPVTVGKDAPISDVADLLVKYNLTAVSVVDDDNKLLGIISEGDLLYKKVRP HVPHYVNVLGASIYYNGIGEYNAQFKKLLASHVHELMTDEVITTTPDKDVEEIVSVMLDQ HLKNVPVVDKEYRLIGILSRRDIIKLIAKDN >gi|292596541|gb|ADCV01000007.1| GENE 171 180493 - 180972 471 159 aa, chain - ## HITS:1 COG:BS_yydA KEGG:ns NR:ns ## COG: BS_yydA COG1576 # Protein_GI_number: 16081075 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 158 1 158 159 149 47.0 3e-36 MRFYVVCIGKLKDAYLREGVAEFVKRMRPYGGITITELNESKIGDKPSNADRKQVVAEEG DRLLKAVPKNAYTVLLDVYGKPMSSEELAKTVSKLEVDGVSDMAFIIGGAFGVSDILRQA VNYKLSFSPMTFTHQMVRLLLVEQIYRASKINRNEPYHW >gi|292596541|gb|ADCV01000007.1| GENE 172 180975 - 181781 602 268 aa, chain - ## HITS:1 COG:CAC3538 KEGG:ns NR:ns ## COG: CAC3538 COG1235 # Protein_GI_number: 15896774 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Clostridium acetobutylicum # 12 252 6 247 261 164 35.0 2e-40 MSESSPLEVHVLASGSKGNCTVIKKGNSVILHDVGISCRRIVNGLKELQIDMAQVEGIFV SHEHSDHIAGLQQLLKRFDIPVYTKQGTWREIQDKLIVPKNRLIELTKGSLTLGSLIVEP FSVSHDAADPIGINVFAGNDKATIVTDTGVISDDILRRIDDTTLLVLEANYDPHMLRFGP YQPFLKQRVASDEGHLSNEMAAQALLMMKRPDFMQVILAHRSENNNNSVLVTQTIGKMLV DGGVRIGPEMKLQHGQPNEIVSIQSVKR >gi|292596541|gb|ADCV01000007.1| GENE 173 181887 - 183074 1219 395 aa, chain - ## HITS:1 COG:AF1587 KEGG:ns NR:ns ## COG: AF1587 COG1850 # Protein_GI_number: 11499182 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose 1,5-bisphosphate carboxylase, large subunit # Organism: Archaeoglobus fulgidus # 80 368 100 389 437 157 31.0 3e-38 MKDERFIVTYRIEASTYEEAKSIAWAVQVEQTIEFPYEFVTDPYIKETITGRLESLEPIV EDSPYINVGVMPNAVIDTSRYYLARISYHVDTTALEATQFLNVVFGNSSLQPHIWVVDIE LCPTLYDVFKGPRFGLQGIRCLVETPTRPMIQAVVKPMGTPNGELARMCGAYTRGGADVI KDDHGISNQSFSQYKDRVKRCASMVQEMNTTHGTHTLYAANVSGDGTDVLERAYFAKEAG ATALMVASGLVGFGWLHKLATDEKLRLPIIHHPAYSGGFVSPGVSGVADYLQLGLLPRIF GADMPIFVSYGGRFTFTEEQCKRISSYIKRPMGLMKAACPAPGGGVTDTRLNELVELYGN DTMFLVGGDMFRRGPDIEANMSYFVERLTKLSERT >gi|292596541|gb|ADCV01000007.1| GENE 174 183279 - 184664 416 461 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 11 427 7 417 447 164 28 3e-39 MSKGASGVDHVDGMLPIPQLFAYGLQHVLAMYAGAVAVPIIIAQAMHLPIEDLIRLITAD LFTCGVATLIQTLGFGPVGGRIPLIQGVTFASVGPMILIGQQHDITTIYGAIIVAGLFTF LVAPFFSRLIRLFPPVVTGTIITIIGINLMPVAVNWMGGGVGNKNFGDPLYIALGVATFV LVVLTYRFGKGFLGNLAILVGLILGTALAMIVGITDFSEVGRSQWISVVTPFYFGLPTFD FASIVSMIIVMLVVMVETTGDSIAVGEIVDKPIGQNELAAVLRADGLSTIIGGILNSFPY TAFAQNVGLIAVTRVKSRFVVAASGVILILLGLFPKLAAIVACIPNAVLGGAGIAMFGMI IASGIRSLGKVSFDGNYNLMLVAISIGVSMIPLAAPQFYTHFPAWAQILLKSGITAGSIV AVILNVMFNGFGYKTVNEPNRATRKYRHFTRFKGYPKHFYQ >gi|292596541|gb|ADCV01000007.1| GENE 175 184810 - 187359 2946 849 aa, chain - ## HITS:1 COG:BH0748 KEGG:ns NR:ns ## COG: BH0748 COG1529 # Protein_GI_number: 15613311 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Bacillus halodurans # 169 843 15 741 760 376 34.0 1e-103 MYRFQVNGTQYEVQEDQRLIDFLRADLKLTGTKEGCSAGACGTCTVIIDGKKAKACVSKL SQLDGKSIVTIEGLSEREKAVYTYAFGECGAVQCGFCIPGMIISAKVLIDENNDPTPDDV KKAILGNICRCTGYVKIEEGIMLAAKMFRENLPVPEKDTNGNVGARLHRVDAEEKALGTG QYSDDIYMDGMIYAKALRSKYPRARVDRVDVSKALEHPACVTALTAKDVPFNKTGHLVPD WDVLIAEGDITRYVGDAIALVATTEKKYLDEVLALVEVDYTELEPVLDPLEALKPDAPQL HPEGNVLSRQTLSRGDVDKAIAEAAFVVTNHYSTPQTDHAFMEPECAVAYREGDEIHLHS GSQNVYDDRREVARMLGIPNEAVKVHSMLVGGGFGGKEDMTVQHHASLVAWLTGKPTKVL FSRQESLNIHTKRHAMEMDITTACDAEGNLVASKVNIVSNCGAYASLGGPVLQRAGTHSC GPYHFDNFAFDGVCVYTNTVPGGAFRGFGVTQTIFGQEQNIDELAALVGMDPWEFRYKNV VRPGDSLPNGQICSKETALVECLEAVKDAYYASDRTGLAVCLKNSGIGVGLPDTGRVILE VRDGKVRIRTGAACIGQGMATMATQVLCETTGLTADKVFVERPDTVRTPDSGTTTASRQT LFTGEATRKASLRLKEMLDTKTLEELNGVEIYEEFLGETDPFNSDKSHPKNHVAYGYGAC VATIGEDNKVANLHVAYDVGRVVNPQSCTGQAEGGAIMGMGYAVTEDFPYKEGYVTSKYG TLGLLRATQCPPIHVSLIEKGTPEQYAYGAKGIGEISSIPIAPAIANAYRRIDGEPRRSL PIKHTGYKK >gi|292596541|gb|ADCV01000007.1| GENE 176 187377 - 188726 1132 449 aa, chain - ## HITS:1 COG:ygeZ KEGG:ns NR:ns ## COG: ygeZ COG0044 # Protein_GI_number: 16130775 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 2 440 7 446 465 295 36.0 9e-80 MIIIQQGELVLTDRILTGDILIDGDKIVAIDEHLSVPEGAKVLNAKGCYVFPGFIDPHTH FQMTNALASTADDFDSGTKAAILGGTTSIINFASPEDGSLCKGLEVHKERALGHCSCDYK FHMELVEMNEEVSHEIPKVVEAGVSSFKVYLAYGFRLTDREIYDAIEAIKPTGALVGAHC ENGDLIDAFVADKRKRGELDVDNHPLTRPAMIESEAIKRFSTIGAALEYPVHIVHVSSKE GVDEVLRERALGHQVTCETCPQYLVLDESRYKLPDFEGVKYVMSPPLRTIQDQMALKDAL VNGVFQTIGSDHCSFTFNDQKLKSRYDFTRIPGGIPGAEERGIIAYDVLVNQCNMSAVDF MKLVSENPAKLYGMYPKKGTLAVGSDGDITIVDKHIEHMLSKESAHTKADYIPYEGISVT GKVRDVILRGHHVVQDGSLTESYLGECIP >gi|292596541|gb|ADCV01000007.1| GENE 177 188723 - 190414 1588 563 aa, chain - ## HITS:1 COG:ygfK_2 KEGG:ns NR:ns ## COG: ygfK_2 COG0493 # Protein_GI_number: 16130780 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Escherichia coli K12 # 448 561 451 573 582 81 34.0 5e-15 MSDIMYPVSFGNLMNHIMTEYKMYNRIYNVNKIHRTNHNQRLSIFGKSIENPVGPAAGPN TQLAQNIVASYVAGARCIELKTVQIMYGEELGIPRPCIYSVDEAYNVEWSSEYSCDEAAD EYIKAWFALKLISKELGLGDPDGFLFIMSVGYNLAGIKSPMVDKFINTMRNASQSPMWDT CKQWCLDHVDEFEHIDADYINSISDELCQAITLSTMHGCPAEEIESICSYLISEKGLHLY LKCNPTLLGPKRIRELLDNAGFEYIDFEDHQFEVDLQFDKAVPMLERLIALGEKHNKIFG VKLTNTFPVQIHNNELPGEQMYMSGKSLLPVTIGVAELLSAQFGERLPMSYSGGAVKQNI KAIFDCGIWPVTVCTILLQGEGYNTFKGLADEVESTDYNAALKVHKELIAKLAKDIAENK IFKKSDAMKKKREAMPSFPGTRSSDYHCRVVCGACVRVCPNRCNEVVTVNDAKLIIHVDQ SCNECGNCACHCVEPCQPYKDRITFFHNAEALADSTNDGFYIKGTSCGYRFKGEEAVCDI DALPEELKGVVHAFCKEHVYYVS >gi|292596541|gb|ADCV01000007.1| GENE 178 190443 - 191771 1533 442 aa, chain - ## HITS:1 COG:ECs3752 KEGG:ns NR:ns ## COG: ECs3752 COG0402 # Protein_GI_number: 15833006 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 24 441 23 439 442 220 32.0 3e-57 MIILGKGTVITRDADRPIIYDGAVAIDGTQIVDIGKYDELCKAYANAEIIDAHGGLIMPG FINAHHHIYSALARGLSLPGPAPTNFGEILEGLWFYLDNKLTAPDVKASALLTYLGCIEN GVTTIFDHHASYGEVPNSLSIIADVAKQFGVRSCLCYEVSDRNGVDQMKAAVAENVRFGK EAKQDPSRLAAMMGLHASFTLSTETLDYVKAHNEDQLGYHVHVAEGPEDVADSKEKYGMT PVRRLVEAGILCPKSIAGHCVHVTDEDVALLKKSQAKVVHNPESNMGNAVGTTDILKLLD AGITVGLGTDGYTNDMLESYKVANCLVKHEQHKPYVGWGEVPHMLFENNRKMANEFFDTT VGILKKGAAADVIVLDYAAPTPLDENNINGHLLFGANGMYVVTTISDGVPRMIDRKLQGI DKAEVMNEVLATSKGLWKRLNP >gi|292596541|gb|ADCV01000007.1| GENE 179 191826 - 192761 1223 311 aa, chain - ## HITS:1 COG:ECs3747 KEGG:ns NR:ns ## COG: ECs3747 COG0549 # Protein_GI_number: 15833001 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli O157:H7 # 1 309 1 308 310 348 61.0 8e-96 MKKRVVVALGGNALGNSLPEQKIAVKSTAKTIIDLVEADCDVVVTHGNGPQIGMINNAMA ALTREVEGQPNTPLSVCVAMSQAYIGYDLQNALHEELLNRGIKDLPTMTMVTQVLVDQND PAFQNPTKPIGHFMTQEEAEYAEKNYDYVVKEDAGRGYRRVVASPAPKEIIELEAIKGLV GKQLIVACGGGGIPVTKEGNELHGAAAVIDKDWTSSLLAQEIDADVLVILTAVEKVAINF GKENEKWLDEITVTQAKEYVSAGEFAEGSMKPKVEAAIAFAESKKGRVSIITLLEKSKDG IAGKTGTRIVL >gi|292596541|gb|ADCV01000007.1| GENE 180 192830 - 194023 1379 397 aa, chain - ## HITS:1 COG:ECs3743 KEGG:ns NR:ns ## COG: ECs3743 COG0078 # Protein_GI_number: 15832997 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Escherichia coli O157:H7 # 1 396 2 396 396 555 67.0 1e-158 MTDFNKSIETLQKLDVSKMYGEDFFLTWEKSDDELQGVWAVADALRALRERNISTKVFDS GLGISLFRDNSTRTRFSFASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFMADVIG IRDDMYIGKGNAYMHQVSDAVKEGHEDGVLEQRPTLVNLQCDIDHPTQIMADTAHIIKEF GGVENLKGKKIAMTWAYSPSYGKPLSVPQGAIGLFTRLGMEVVLAHPEGYEVMPEVEEIA KKQAEASGGSFRRTNDMKDAFKDADIVYPKSWAPFGAMEKRTKLYGENDHEGIKALEKVL LEENGKHKDWACTEEMMSLTKDGKALYLHCLPADITGVSCEEGEVDATVFDRYRIPLYKE ASYKPYVIAAMIFLSKFKNPVETLKELERKGTERVQP >gi|292596541|gb|ADCV01000007.1| GENE 181 194176 - 195486 1790 436 aa, chain - ## HITS:1 COG:ECs3745 KEGG:ns NR:ns ## COG: ECs3745 COG0624 # Protein_GI_number: 15832999 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Escherichia coli O157:H7 # 3 430 7 396 403 529 60.0 1e-150 MDLQAIKQAAATYGPAMTKFLREIVAFPGESAEEKDHVKRIEQEMKDLGFDEVEVDPMGN ILGYMGTGKTLIAFDGHIDTVGIGNRDNWDFDPYDGFEDETKIGGRGVSDQLGGIVSAVY GAKIMKDLGLLSDKYRVLVVGTVQEEDCDGLCWEYMIKERNIRPEFVVSTEPTDGGIYRG QRGRMEIRVDVQGVSCHGSAPERGDNAIYKMADILQDIRELNANSADESTKIKGLVKMLD PKFNPDHYEEARFLGRGTVTTSQIFYTSPSRCAVADSCAISLDRRMTAGETWQSCLAEIE ALPHVKEYGAKVSMYEYARPSWTGLTYPIECYFPTWVIPKDHKVTEALEEAYTSLYGNER IGAEDTVEMRKARPLTDKWTFSTNGVSIMGRNGIPCIGFGPGAEAQAHAPNEITWKQDLV TCAAVYALLPSVYCKD >gi|292596541|gb|ADCV01000007.1| GENE 182 195499 - 196710 1425 403 aa, chain - ## HITS:1 COG:STM1002 KEGG:ns NR:ns ## COG: STM1002 COG1171 # Protein_GI_number: 16764362 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Salmonella typhimurium LT2 # 19 400 22 401 404 398 50.0 1e-111 MERIQWKRNTMAPSSDKFLSVMDVREVKKAKAFHESFPQYSVTPLVSLKNLASYIGVDAL FVKDESYRFGLNAFKVLGGSYAMAKYVAQQTGKAVEDVPYDVLTSAKLKEEFGQATFFTA TDGNHGRGVAWAANKLGQKSVVFMPKGSTEYRRKQIENEGATVTIEDFNYDECVRLATKK SKEVPNGVVVQDTAWEGYEEIPNWIMQGYGTMAMETANQLEADNCKVPTHVFVQAGVGSL AGSVVGYFTNLYSNVAKKPKLVVVEAAAAACLYKGAVADDGKPRIVEGDLETIMAGLACG EPNTVSWDILRNHADVFVSAPDWVARLGMRVGGAPIKGDTPITTGESGAVPLGLVMAIMT MPEYEDLRKELELDASSKVLCFSTEGDTDPERYKNIMWYGEDR >gi|292596541|gb|ADCV01000007.1| GENE 183 196720 - 197352 532 210 aa, chain - ## HITS:1 COG:VC0355 KEGG:ns NR:ns ## COG: VC0355 COG2964 # Protein_GI_number: 15640382 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 4 209 31 236 240 84 30.0 1e-16 MSTLERIKVIAHGLAVQFGPSCEVLIHDLQGDINSSLVYIENGTITNRHVGDGPSHVVLD VLSHDDGSEGRFGYLTKTKDGRILKSSTMYIRDDTGRIAYLLGINQDITEFVMMHRLLDS LVNTGQEDAGSVEKITTSVSELLDDLLLDVERLVGKPGPLMNKVERLKAISYLNEKGAFL ISKSSEKIAEYFNISKFTLYSDLNTVKEES >gi|292596541|gb|ADCV01000007.1| GENE 184 197750 - 198169 734 139 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 2 139 4 142 142 97 42.0 7e-21 MIGVIFWSGTGNTERMAYEVAEGIKAAGQEVEVKSVSEVSVDEAAAYEKLALGCADMGAE QLEEGEFEPFYTELEGKLSGKKIAIFGSYGWGGTWLEDWGTRIKDAGGELVADGVAILGE PDDDGNAQCQELGKTLANA >gi|292596541|gb|ADCV01000007.1| GENE 185 198180 - 198746 279 188 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1275 NR:ns ## KEGG: Vpar_1275 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 188 1 188 188 377 99.0 1e-103 MMNSIDHIIGYHCAPAIRGIKLSNLVSIPRDMNEQIQFVLIEYNKAFNEKGLFFFELCRC KARRLLLVFREKQLRDYVRQPAVMLFLKAYGYHDRMSIMEMLEHLRYRMEVSIEFPHEIG IFLGYPLKDVKCFISYRGGGYRMCGEWKVYHDVVNAQRSFLCYKACREFCQTQLMLGKTF SSLVARTA >gi|292596541|gb|ADCV01000007.1| GENE 186 198872 - 199504 562 210 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1276 NR:ns ## KEGG: Vpar_1276 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 210 1 210 210 323 91.0 2e-87 MKKIVLLATVAAVLVSIPATGSAANIKSILNRSQTVTYQGVKLPEGVTMYQNNPKALFAG EGKKDIKSVLLEAGAYSADVYTLNIKNENEMQYAVYANVVLGKQLSSRMSEAKHMNTDSS SLGALAAAINNGDSPVLGTFTVINPLAKQGNAYKGTLKYKSIANNNSYNEILHISISEDK YTGPNAHLIAVDEANDSVVFPKVKGLLHTK >gi|292596541|gb|ADCV01000007.1| GENE 187 199542 - 201245 2149 567 aa, chain - ## HITS:1 COG:STM0686 KEGG:ns NR:ns ## COG: STM0686 COG0008 # Protein_GI_number: 16764056 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Salmonella typhimurium LT2 # 19 564 5 553 555 637 58.0 0 MEVRTLEHKDIEKDVAPEEVVSVNFIEAIINKDNETGKYGGRVLTRFPPEPNGYLHIGHA KSICLNFGIGKQYNGLTNLRFDDTNPVKEDVEYVNSIMEDVKWLGFEWNEQPRYASDYFG QMYEYAKKLITLGKAYVDDQTADEIKQNRGDFSTPGVNSPYRDRSVEENLMLFEEMKAGK YKDGEKVLRAKIDMAHPNIVMRDPVIYRIVNTEHHNTGNEWKIYPMYDFAHPIEDAIERI THSICTLEFEVHRPLYDWVLEEWDDTEIPQQIEFARLNVTKMVMSKRKLRALVEAGLVAG WDDPRMPTISGLRRRGYTPEAIRDFCDRIGVAKADSVVDIALLEFCIREDLKLKATRPMV VIDPVKVVITNYPEGQTELCTVENNPENEELGNREVVFGREIYIERSDFMEEPVKKFFRL APGKEVRLKGAYFITCTDVIKDENGNITEIHCTYDPETKSGSGCTRKVKGTLHWVEASTA VDIESRLYDYLLKEDSDGKDFLGDFNHESLQVFNSKGEASLATTVPGDHFQFLRQGYFVT DKDSTSDHIVVNRIVGLRDSWAKAQKK >gi|292596541|gb|ADCV01000007.1| GENE 188 201313 - 202362 1367 349 aa, chain - ## HITS:1 COG:APE1831 KEGG:ns NR:ns ## COG: APE1831 COG1052 # Protein_GI_number: 14601656 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Aeropyrum pernix # 3 322 14 339 347 244 40.0 2e-64 MEKKPLVVVNGLVRKDAIAYLKEHVDVRQWTEKTVMPREVLKEWLVDADGLWCVRPLDVD ADLVKNAPNLKVIAQAAVGYDNVNIDELTAAGIPYGNTPGVLNETVAELAFTLIATASRR IIENANFVKDGRWAQRPSNIKGFDLSRRTLGIIGMGAIGVSISRRARAFGMTVVYHNRNQ RLDDKIHKTTYMELDDLLATSDVVCVMAPLTDETYHMCDEAFFKKMKNTALFVNVGRGPI VDTEALINALNTGEIDYAALDVTDPEPLPVDHPLLEVENCLIVPHIGSYTDRTRYDMSIL TADNIIAGVHKKPLKTCVNEEVNYKKPQMDVESALEELKKAGVDLTDFD >gi|292596541|gb|ADCV01000007.1| GENE 189 202486 - 202953 605 155 aa, chain - ## HITS:1 COG:AGc934 KEGG:ns NR:ns ## COG: AGc934 COG1970 # Protein_GI_number: 15887877 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 128 2 120 142 120 49.0 1e-27 MKDFLNDFKAFAFKGNMMDLAIGMIIGAAFTALVNSVVNNLFMPVLSVFTGGIDFSNLYL PLSTGSKDAFMAGADIATARAAGSVLPYGTFITDLIQFLILAFVVFLMVRGLAKMMKSAK EEEVAEAPTTKECQFCKSEININAVKCPNCTADLN >gi|292596541|gb|ADCV01000007.1| GENE 190 203238 - 204932 1476 564 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1280 NR:ns ## KEGG: Vpar_1280 # Name: not_defined # Def: ATP-dependent endonuclease of the OLD family-like protein # Organism: V.parvula # Pathway: not_defined # 10 564 1 555 555 1087 98.0 0 MKVATDGGAMYIKWMHIENYRNLADVTLSFHNDINYFVGENAVGKSNFLDLLEIIMECHG FIESDFTDVNKPIRIDFEISLGELNYKSMYTADEGPTYRLRLEQVVQEVYPRLYRVTDAG IEPMALSMIRHALYVCHRDTSEQELFSIPSAVYIELGHLLQAYVSRLEMATDDLQREIVS LRKDLDPYCMLNIQHLIEVLSTSSAIERKYSADNVRLIMAVALKILAQIYMKVSSATTNL EALLVYDGKGRKFLPIFISVDEPELHLSPYLQRAVLNYYRQIATNENEEFLSLLRDVFKI DGLLGQLFVVTHSTDALVDDYRHIIRLYRDENNMVCAACGVTFNFPKEVEKHLIMHFPEA KEALYARCIIIVEGETEYGSFAGFGKRLGVDFDYFGICLINARGESSISKLQKLFNRFSI PTVALYDRDVEGKYAKAHSNIFYTQEICFEMDFVSYLLAMHKRSIMDAIIKDIIDDARPM VTKDMARRGYAKLGITKSQIVQRCLSNISDRKLDDLHIYYFSWFYANKGVIVGRRISQFL DASMIPPAFIAVIERAKLLSLGLG >gi|292596541|gb|ADCV01000007.1| GENE 191 205077 - 205964 778 295 aa, chain - ## HITS:1 COG:PA4834 KEGG:ns NR:ns ## COG: PA4834 COG0697 # Protein_GI_number: 15600027 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 1 279 5 283 284 150 34.0 2e-36 MAKKGLIYALLSALLFSTMNVFVKLLGTNIPPGEIAFARGFFGTVAVLIIMYVKGIRFSK ENRGLLVMRGLYGGFGMVCNFIALVHIKLSDATILFQTTGIFVFIFSALFLKESIPKGAG KWLGVILIAVLVMVNPFSYESFSWYALVAILGAALAAAAYTTIRTISKRGQHSNFEIMAY FMITGMIAGLVTTEQLVMPQGTDWLIIFAIGGISVVAQFFLTGAFVTTNAVVAQFLQYVG VFISSFYGFLIFGESLSIATVGAGIAMFISSVMLARLKEQSGPLREGKVIEDKIK >gi|292596541|gb|ADCV01000007.1| GENE 192 206177 - 207676 1994 499 aa, chain - ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 3 494 6 494 496 433 48.0 1e-121 MNYTSTRGTVAVNETYALLHGLAEDGGLYVPSLFPTNCLTYNDVKDKNYQEVAAVVLAKL FPCFSEAHLNEMINSAYCDANFSTRDIAPLHSLLEKVSVLELFHGRTQAFKDMALSLFPY LLVAAKEAEGEKKEVLILTATSGDTGKAALEGFKDVPGTHIQVFYPTDGVSPMQAEQMQK QEGENVNVTAIHGNFDDAQQFLKRLFVDKATAEEVAEKGVMFSSANSINIGRLAPQVVYY VNAYAELVAQGAIHEDEAFNVVVPTGNFGNILAAYYAKKMGIPIGKLICASNQNNVLTDF FENGTYDMNRPFYTTISPSMDILESSNFERFLYYISGEDSERTAEWMKDLKATGKLTVNE EEFKRIKTDFAGAYVDDEETKAIIEQVYNSYGYVMDPHTAVAMGAYMKELEKHPEDGARH TVIASTAHPFKFPTPICEALDIKVGETPYESLENISTVTGVAFPKQLEALQSKPLRFTKA IDKENMKQEILDFVDTFSK >gi|292596541|gb|ADCV01000007.1| GENE 193 207859 - 208800 1337 313 aa, chain - ## HITS:1 COG:MT0820 KEGG:ns NR:ns ## COG: MT0820 COG2837 # Protein_GI_number: 15840211 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Mycobacterium tuberculosis CDC1551 # 38 306 34 307 335 207 40.0 1e-53 MAVDVSRTQDVYKDAGQSVNFTTLLLNRKDHEAELEVIQDMADRIQAIKRSVSIRANGEG LGIAFGFSRKAWDYLFPNAPVPKELEDFEGIKGDKQDVPAVAADLFLHVRSNDESVTYTV VDQIMEFLRPITSVVDETHGFHYEQGRAIIDFVDGTENPVGQEAVEWGVIGDEDPEFTNG SYAFAQKYEHDLDAWRALPTEMQEKFIGRRKFSDIELEDDEKDPAAHNVVAQDNRDDEEH KIVRMNVPFAQPGQGVRGTYFIGYARYWDVTKTMLTNMFTQNDKLLDYSKPITGMLFFIP SLDTLDAIAEGEL >gi|292596541|gb|ADCV01000007.1| GENE 194 209241 - 209543 148 100 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1284 NR:ns ## KEGG: Vpar_1284 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 100 1 100 100 204 95.0 1e-51 MGFFDFLKPRSKENVESCWPGGKMLQVHIEYNTQETVFTYFGRYGLQFSVPKSNLTNVIV KEVSRTHSVLQLYSGENCVGTSDLLPTEACNIMKDWVLQY >gi|292596541|gb|ADCV01000007.1| GENE 195 209545 - 210510 970 321 aa, chain - ## HITS:1 COG:lin1039 KEGG:ns NR:ns ## COG: lin1039 COG2896 # Protein_GI_number: 16800108 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Listeria innocua # 1 321 4 333 333 203 37.0 4e-52 MKDAWGRTIEYVRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMNILGAFHHIGVKA VRLTGGEPLLYPHIEELLGRIKETGWFEDISMTTNGSLLASRAQRLKKLGLNRVNISLDS LETEAFATCVGKEGQLESVLDGIRSAINANFKSVKINTVLSRYWSDDEVKSLLQYVEKWP VVWRFIEYMPFQGDAFHGPTFDEWKEQLERVSGGSLTEVHSVYGFGPATYLALPSGKAVG FIFSMSHSYCDTCNRVRLTSDGQMRLCLLRDDEADLVSLVRKGVSIKDLANHIERALQRK QERHDGIGMDQPERPMWRIGG >gi|292596541|gb|ADCV01000007.1| GENE 196 210537 - 210977 563 146 aa, chain - ## HITS:1 COG:CAC1991 KEGG:ns NR:ns ## COG: CAC1991 COG2258 # Protein_GI_number: 15895261 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 4 145 3 143 145 149 49.0 2e-36 MADGKIIAISISERKGQKKHNIESANLIVDHGMEGDAHAGNWHRQISLLGIASIDHMRAQ GADVKPGDFAENITVEGMVLYELAVGTHLQVGDDVILEITQIGKECHQGCEIMKQVGSCI MPTQGIFGKVLKTGTIHVGDEVSIIK >gi|292596541|gb|ADCV01000007.1| GENE 197 211191 - 212555 442 454 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 22 447 7 426 447 174 28 3e-42 MGDISRFYVGDIMTDQNQINTVDSMLPIPQLFAFGLQHVLAMYAGAVAVPIIVAQAMNLP VEDLIRLITADLFTCGIATLIQTLGFGNIGGRIPMIQGVTFASVGPMTMIGAQHGMTAIY GAIIVAGLFTFLVAPFFSRLIRLFPPVVTGTIITLIGINLMPVAINWMGGGVGNPEFGSY TNIGLGFLTFLIVVFVYKFAKGFLSNLSVLIGLIAGTAIAFAMGVANFDEVGRSQWVAFI EPFYFGLPTFDWASVLSMIIVMLVVMVETTGDSIAIGEIVDKPIGRKELASVIRADGIST LIGGILNSFPYTAFAQNVGLIAVTGVKSRFVVAASGVILILLGLFPKLAAIVASIPNAVL GGAGIAMFGMIVASGIRALGKVSFDGNHNLMLVAISIGVAMIPIAAPNFYANFPDWAQII LKSGITFGSIMAILLNLLLNGVNKGDEIKEMGRR >gi|292596541|gb|ADCV01000007.1| GENE 198 212700 - 213317 779 205 aa, chain - ## HITS:1 COG:SPy2084 KEGG:ns NR:ns ## COG: SPy2084 COG3404 # Protein_GI_number: 15675842 # Func_class: E Amino acid transport and metabolism # Function: Methenyl tetrahydrofolate cyclohydrolase # Organism: Streptococcus pyogenes M1 GAS # 1 189 1 189 208 130 41.0 1e-30 MKLVEQRVIDFVAATASKEPTPGGGAIAALTAATGAALAEMVANLTFGKKGYEAVQPEME ELQAKAEAIRKRMLELSQADADVFNIFMNALGLPKNTDEEKAARTAAIQQAYKDAAMVPF EIGELANQIFDLAELASRKGNQNLITDGIIAAINARAAVKSAFLNVRINLSGIKDESFVE ELISKMYAIEKDLDVKESSIIGLYE >gi|292596541|gb|ADCV01000007.1| GENE 199 213347 - 215017 1989 556 aa, chain - ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 556 1 556 556 731 66.0 0 MLSDIEIAQQNTMEKIQVIADKCGLTPDDIEQYGHYKAKISFDAIRRLESKPDGKLVLVT AITPTPAGEGKSTTSIGLVQGLQKIGKNAIATLREPSLGPVFGIKGGAAGGGYAQVVPMD DINLHFTGDMHAITAANNLLSAMIDNHIHQGNELQIDLRQLSWTRVLDMNDRALRNVTVA LGGKVCGFPREDHFMITVASEIMAILCLAKDLEDLKERFGRIVIGCNLAGNPVYVHQLGC QGAMALLMKDAIKPNLVQTLEHTPAIVHGGPFANIAHGCNSIVATKLGLKIGDIVVTEAG FGADLGAEKFLDIKCRYGDIFPDAIVIVATLRALKMHGGVPKQELNTENVEAVTKGFSNL QKAIENMRYFNVPVLVAINKFASDTDAEIAELTRLCDEFGVPVELNECWEKGGEGGTDMA KKVVELLEGPKPTPKFVYELEDSLEDKVNKIVKTIYGGDGVIFTDKAKKQIKQLADWGLD RLPVCMAKTQYSLSDNPALLGAPTGFTITVSDIRVANGAGFIVCRTGDVMVMPGLPKRPA ALNMDIEADGTIKGLF >gi|292596541|gb|ADCV01000007.1| GENE 200 215294 - 216562 1653 422 aa, chain - ## HITS:1 COG:STM3356 KEGG:ns NR:ns ## COG: STM3356 COG0471 # Protein_GI_number: 16766651 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Salmonella typhimurium LT2 # 5 422 4 420 422 405 56.0 1e-113 MDTSVMITLGFLIFAIVMFAWEKIPLSITAMVVAVGLHLSGVLSAREAFAGFVDPNVLLF MGMFVIGEAFFATGVAVGVGNVVHKFAKTETSLLVAVMMITGILSGFLSNTGTAAVLIPV IIGICKKSGFKQTKLLMPLVFAAAMGGNISLIGAPGNMIAQAGLQQAGLGSFNFFDYGLV GLPILIVGTIFYATIGKRFLPDAPSHQPDGAFEGNDDYSHVPSWKKWTAAIVLILTVVAM IFEKQLGVKLYVSAWIGALVLVATNVISETAAVKSIDMKTIMLFAGSMALGDAMVKTGTG SVIADIIVNSLGASPSPIVVLVVIFVLGVFMTNFMSNTATCALLVPIGLSLASQLGFDPK AVLAAIVIASSLAYATPIGMPANTMVYNIAGYSFMDYVKAGVPLIVVSSIVALILLPILF PF >gi|292596541|gb|ADCV01000007.1| GENE 201 216665 - 217285 238 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 178 309 484 508 96 34 2e-41 DIIMAKKILTTPIQQSDLAGIKPGDVIYLTGHITTCRDMGHRRVVEEGKTLPVDVKDGAI LHAGPIIRTISDNEFEVVSVGPTTSMRMEKFEYEFVKKTGVRLIVGKGGMGPETARACKD FGALHCVFPAGNAVLAATEVEKVESANWRELGMCETLWTFKVKEFGPLIVSIDAEGNNYF ENKKVEYNAKKEEVLEEIYKHVNFIK >gi|292596541|gb|ADCV01000007.1| GENE 202 217276 - 218178 241 300 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 10 296 9 299 508 97 25 2e-41 MSTKEQQVQEMTDKIANFISYMAKVLPDDVQEKIHELAQDEKNPMAKSIYETMQHNMDLA AQLNRPSCQDTGVLQFWVKVGSNYPLLGELEDILREATYKATQEAPLRLNCVETFDEFNT GKNIGLTAPYIHWDIIPGRDDVEILPYMAGGGCSLPGSGKTLMPGEGYEGVAKFVLDLMT SYGLNACPPLLVGVGIATTIDTAAGLSKKALMRPVSSKAPNEKAAYMEQLLEDGINKIGI GPQGMGGDKTVLGVNIEHGTRHPSVISCAVSVGCWNHRRGDLVFDKDGNCTVKSHKGVTL >gi|292596541|gb|ADCV01000007.1| GENE 203 218564 - 219433 775 289 aa, chain - ## HITS:1 COG:L0229 KEGG:ns NR:ns ## COG: L0229 COG2207 # Protein_GI_number: 15673492 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Lactococcus lactis # 124 223 174 273 327 79 41.0 9e-15 MEPLDTIIISPQVGHATLALEEDTTALVIHVGKDFFQQFDPNFGMYQFVLRSDESNRYNS FFTTLRHHAAMMMLLMVNGESPTNRLDVEYHYLSLVSDIYKEINKVKSIHVHTKPVDITV ATFDKMIAYIDENYKQKIELEDIAKIGGYNVNYTSQFFKRQLGVSFLEYVLRLRLREATV RLVNSNDAVAHIASSCGFADIKAFNVAFKKHFHTTPSEYRKQANEIGRKTKLHDWKEIIS TQEQDIIEILQSCLPYQDDSTNKIRLEVANQKLNDVREQLEMVVKKLQD >gi|292596541|gb|ADCV01000007.1| GENE 204 219707 - 220042 360 111 aa, chain - ## HITS:1 COG:FN1305 KEGG:ns NR:ns ## COG: FN1305 COG1917 # Protein_GI_number: 19704640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Fusobacterium nucleatum # 15 111 15 111 111 81 40.0 4e-16 MSKTFTKNIPVNEILHLGEHLEYKEGQVISITIAQNERLSITLFALPKGEEISTHVTVGD AIVQILDGEAHIVVGDVEHTVKAGETLIMPSEVPHSLDARESFKMLLTVVK >gi|292596541|gb|ADCV01000007.1| GENE 205 220390 - 221625 1181 411 aa, chain - ## HITS:1 COG:SA2068 KEGG:ns NR:ns ## COG: SA2068 COG0303 # Protein_GI_number: 15927853 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Staphylococcus aureus N315 # 26 404 29 407 419 199 33.0 9e-51 MAVVTVEKALQLWDEALQTQVHKVETIDVKAAKGYVLAEDIIAPTDVPAFPKSAMDGYAI AYEEGRNEYIVDGIIGAGVVWEHPVDVGHAVRIMTGAPVPDTCDTVIMQEQVVGTGEPQT TITIQGKYHCGDHIIPQGEECVAGTIVIPRGTEVTSTVQTILTGLGIIEISVNAMPRVLV LTSGHEVIEPGESLTPGKIYNSNRAMICGLLEDLGFHKITHYHVSDAPEELDSEINHVLK LSEEADVIISSGGVSVGLFDTMPLIYEKLGAESIYARIQMRPGAAAYGAVTPKGQIIFGL SGNPGAAFNGWHLIVAPTLRRYKGLTNWTTPVVACVMDTEIFKRNAFDRYVQGKVIFGGG APRFVANRHFNSSSMLGLYTVNALACIPRGIHEVHPGDTFNVYLLGLLPAV >gi|292596541|gb|ADCV01000007.1| GENE 206 221606 - 222730 748 374 aa, chain - ## HITS:1 COG:BH3017 KEGG:ns NR:ns ## COG: BH3017 COG0746 # Protein_GI_number: 15615579 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin-guanine dinucleotide biosynthesis protein A # Organism: Bacillus halodurans # 1 204 4 197 198 62 26.0 1e-09 MDKLGLIILAGGLSTRMGRPKALLPWINGESLISHALRKGLDADVQDILISIGDDEQLGL AIQTHIIDTLSNDEKNKVSIVRDSVGRCGPLGGLYSTLAVGTSSAYAVMAVDMPFMEMDL YYDWLYQVEHNDWNAIVPYSESGKSEPMAGIYRPYIASLIQSILVGENVSLHHALDVIGH IESIDATDYSWELSNINRFEDYQWARALAENEFRRVPLISVVASKRKTGKTTVVMRLVCE LQNIGLSVGVVKSDKHGFQMDHEGTDTDLVYKAGADAVAIAGPTETAIRIRTKEQSNLYE ISQFMPVDIVILETRSQGIAPIIEVTQEGYTEELISDPMDRVATIEIGKLDQDVPELVRH IQEMMRSLNGRRYC >gi|292596541|gb|ADCV01000007.1| GENE 207 222723 - 223253 603 176 aa, chain - ## HITS:1 COG:CAC2928 KEGG:ns NR:ns ## COG: CAC2928 COG3859 # Protein_GI_number: 15896181 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 6 153 43 186 210 102 35.0 5e-22 MEQSKTRMLAEAGVAIAIAQVLSFITIFHMPQGGSIKAAALVPLMIYAYRWGGTRGIFAG VVYGILHFILGFKSSVHYLSIILDYLVAYGAIGVCGYFKDSLSGLITGSIVGIVLRWGAS VTSGAVVFASYAPQGQNPWVYSMIYNASYMVPDGLLNIAVLLFVYQGVKRGLQRRG >gi|292596541|gb|ADCV01000007.1| GENE 208 223437 - 224423 1410 328 aa, chain + ## HITS:1 COG:BS_yumD KEGG:ns NR:ns ## COG: BS_yumD COG0516 # Protein_GI_number: 16080266 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Bacillus subtilis # 6 328 3 325 326 526 78.0 1e-149 MINTTNIFDYEDVQLIPNKCIVSSRSECDTHVKLGKRTFRLPVVPANMQTIIDEELAEKL AREGYFYIMHRFQPERRMDFVKRMHDLNLYSSISIGVKAEEFALVDEFKKANLTPEYITI DIAHGHSNAVIEMIQYIKKNLPETFIIAGNVGTPEAVRELENAGADATKVGIGPGKVCIT KLKTGFGTGGWQLAAVRWCAKAATKPIIADGGIRDHGDIAKSIRFGATMVMIGSLFAGHE ESPGEEKIVDGKAVKEYFGSASEFQKGERKNVEGKKIFIDSKGSIFDTLTEMEQDLQSAI SYAGGTTLQAIRKVDYVLVKNSIFNGDR >gi|292596541|gb|ADCV01000007.1| GENE 209 224561 - 225844 1448 427 aa, chain - ## HITS:1 COG:YPO1221 KEGG:ns NR:ns ## COG: YPO1221 COG0477 # Protein_GI_number: 16121510 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 48 407 23 377 384 151 35.0 3e-36 MVSCNSAYFRALRIKRTFLRRTVLEARKDVMNDQVSISTANIRGAFGAFFIPGMYTALWA GFVPYLKAKLSIGEDVLGSMILLLGVGSCLSMAIAGKLVESFGCKRVVLLASFIGMVSLA IVTMCPTIATTTVALFFFGIGVGLSGASANLQAILTEKVSKKHLMGAYHGGWSLGGFTGA GVLLVLLKILSLPVNESIWGLLIVLFIAMVIVSQFMLTFGSDPNAKITKKSKSPLSFHPI ALIFGLLSFVSYLVEGAVGDWSALYLFEDKGILIEEAVMGVMLFNGTMCIGRLLGNRLGK HLTSKQVVVGGYLLGSIAMGLIVFLPGHASMYTYLLLGISLAMIVPNLFSAMGEQNVIPM TQAVATSTMLGYMGILMGPALIGFIAHGTSLTVAFIVLTTLLVVSAGIGKYAYHLMSKDC GLSEEQI >gi|292596541|gb|ADCV01000007.1| GENE 210 225922 - 227100 1531 392 aa, chain - ## HITS:1 COG:PH1043 KEGG:ns NR:ns ## COG: PH1043 COG1473 # Protein_GI_number: 14590880 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus horikoshii # 8 388 10 385 387 305 42.0 1e-82 MHSRDLIEQYKGYVQNWRRYFHKHPELSNEEFETTKTLAKELESMGVEVHVDTERGIGLI GIIHGAKHGKAIALRADIDALPVHEHNAVDYKSEVEGKMHACGHDGHMAILLGAAKMLMS MKDRIEGDVYLAFQPAEETGAGAPDFIKFGDWYDKVDAIFGGHVWIDLSAGLMSVEEGPR MAASSQITINVKGKQGHGAQPHQAIDAIVVASAIVMNLQTVVSRNVSALDSVVVTIGNIH SGSEWNVIPGEASLGGTVRFFDPNQEQYIVDTIRRIVEHTAEAYGATATLEYVKKVPPTI NDPESSELAERVVIDTLGKDKLSKMRKVMPGEDFAWYLQDKPGCFAFIGIQNPDVEATYD HHNNRFNMDDTVLSAASAVYAEYAIQWLKENK >gi|292596541|gb|ADCV01000007.1| GENE 211 227274 - 227456 320 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTESLRNEVLVPAVAKTLDIAAKAKPTKEELITTAKITAAVTVATAVVSLAVQAVLRNR >gi|292596541|gb|ADCV01000007.1| GENE 212 227594 - 228781 1411 395 aa, chain - ## HITS:1 COG:aq_023 KEGG:ns NR:ns ## COG: aq_023 COG4992 # Protein_GI_number: 15605627 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Aquifex aeolicus # 14 389 3 376 376 296 44.0 5e-80 MNNTIDFEQQDKEYIANTYGRFNVCFQKGKGSLLWDVEGKEYIDLGSGIGVTAFGVDDDE WTDAVTKQSHALNHISNLYYSLPQIELAKQLCAKTGMKKVFFSNSGAESNECAIKAARKY SHDKYGEGRHVVVTLVNSFHGRTITTLSATGQDVFHQHFFPFTEGFIHTPVNDIDAALKV LANPAVCAIMMEPIQGEGGVMPLDKEFVQAVTKYAHEHDQLVLIDEVQTGNGRTGSLYAY QQFGIEPDVVSTAKGLAGGLPMGATLFNEKMQYVLNAGAHATTFGGNPICAAAGNTIISR LTPEFLDSVKAKGEYVKETLTGKPGVIGVSGMGLMLGIETTVDARTVIEKCLEKGVVCLS AKNKVRLLPALNIPQEQLEKAIAILAEVIEELAVK >gi|292596541|gb|ADCV01000007.1| GENE 213 228867 - 229724 944 285 aa, chain - ## HITS:1 COG:alr1245 KEGG:ns NR:ns ## COG: alr1245 COG0548 # Protein_GI_number: 17228740 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Nostoc sp. PCC 7120 # 7 285 14 293 297 272 49.0 7e-73 MKNVTNAMRAHILTAAVPYIKQYTDQYVVVKYGGNAMVDEALKKSVMKDLLLLQLVGVKV VLVHGGGPAINSTLEAMQIESHFANGLRVTDEATMDVVQMVLAGKVNKGLVADLTDLGGK AVGLCGVDGNMIQVHKQNEELGYVGYIDTIDTSIIHDVISRGYIPVISSIGMGADGKTYN INADTVAAKIAGALKAETMVAMTNIDGVLRDVHNPKSLISKITMAEANQLKVDGIIAGGM IPKVDCCLEAIKSGAQKVFIINGEIPHAILIELLTDEGLGTMFVA >gi|292596541|gb|ADCV01000007.1| GENE 214 229735 - 230685 977 316 aa, chain - ## HITS:1 COG:RSc0142 KEGG:ns NR:ns ## COG: RSc0142 COG0002 # Protein_GI_number: 17544861 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Ralstonia solanacearum # 5 313 4 313 337 270 45.0 2e-72 MTPHRVFIVGHEGTTGLRIHERLSDRKDIELLATADEDRKNVEAIKVVAKKADLVFLCLP DVASKEIMAAIGDFPCKVIDTSTAFRTTAGWAYGFPELGESYKTAIATKKHIANPGCHAS GMIACIAPLVKAGLVPADYPFTITSLTGYSGGGKKMIGQYESSPKDYFLYAPRQYGLGQE HKHLPEVQHVCGISEAPIFMPIVDDYYSGMEVTVGIHSRLCHKPVCIDKVQQTLEYFYKD STIVTVAPFTENSNSGMLNANQLSNTDSMKIYVTGNDERIMVHAIFDNLGKGASGAAVQC MNIALGLPEDTGLVLG >gi|292596541|gb|ADCV01000007.1| GENE 215 230796 - 231806 1145 336 aa, chain - ## HITS:1 COG:STM4465 KEGG:ns NR:ns ## COG: STM4465 COG0078 # Protein_GI_number: 16767710 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Salmonella typhimurium LT2 # 3 332 4 334 334 413 58.0 1e-115 MKSLQHTSFKTMLQYTPEEIKYFLDLAAKLKADKKAGKEIKTLVGKNFALIFEKDSTRTR CAFEVGAADQGAHTTYLGPTGSQMNKKESLKDTARVLGSMYDAIEFRGFDQADVDTLADY SGVPVWNGLTDMDHPTQTLANFLTIQENIDKALNKISFAYVGHGQSNMCNALMSGAVKMG MDFRLIGPKQYWPAGPFYEECLKVAKETGATITCTDDVAEGVKGLDVIYTGVWVTMGDTY DMWEERINTFKPFQVNGEMMALTGNPNTKFCHCLPAFHNTETQVGKDIYERFGMNGIEVT EEVFEGSNSLAFQEAENRLHTIKAVMVATFGDYPLK >gi|292596541|gb|ADCV01000007.1| GENE 216 231838 - 233022 1260 394 aa, chain - ## HITS:1 COG:PH1043 KEGG:ns NR:ns ## COG: PH1043 COG1473 # Protein_GI_number: 14590880 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus horikoshii # 4 391 1 385 387 270 40.0 3e-72 MNALQDLIKTYASQYKEQVVEWRRHIHSHPELSGEEKHTSLFIQKVLGELGIPFVNDISD YAVIGKIEGAHTGPVIALRADMDALPIHEITGVPFASQNEGVMHACGHDSHMAILLGAAA ILQSIKNQLHGTVKLVFQPSEEEALFPGAQGIVDSGILDDVDEIYGLHVWPQLPVGTVGL KKGNLMAASDHFLVHIKGKATHGAEPHNGVDAIVAAANWIVNVESMVARETNPMENLVCT IGVINGGDRYNVGCGDVYLEGTCRTYEPEKRDYIERRLGESLQALDVMFKTESTLDYKRG HGATINNPEAIDYATSIVEKYLGKEAVVHPEFPSMAAEDFSAYLHKIKGAFLWLGTGFEG NPALHNEAFTIDESILEPGITMMAAIAAEFLQEK >gi|292596541|gb|ADCV01000007.1| GENE 217 233251 - 233340 91 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSMTVTPNKLIVKSFLPDGTQLDESVIEK >gi|292596541|gb|ADCV01000007.1| GENE 218 233395 - 234573 1183 392 aa, chain - ## HITS:1 COG:CAC0205 KEGG:ns NR:ns ## COG: CAC0205 COG1409 # Protein_GI_number: 15893498 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 73 389 70 396 652 70 24.0 4e-12 MNKKRLIISVLAIIALVCVTIGGYVHKDAIQSRIARTAAVVSGQEIKPLLDSESRYIRQI VAQDNSTSRTIMWQSDSSEADAVIEYRLVGSDTTQTIRATDKAFTDDGSTTYIHEGTLTG LMPSTKYEYRVGYGSDRRSDWYSLETAGASVYDVLIYPDSQSGDYSQWEEIVMDSAHRNP RTALYISMGDLVDNGEQAYQWRTWLNSIRPLSANVPLATTLGNHEMYTLDWKMREPYAYL NYFGVPPNGNETFNRRYYSYDFGDVHYVVLDTMLYESNHEDNHDTHHPDLYDVQVQWLRQ DLATNTKKWTVVLMHRDPFRYAFDRPGASRDVGFDDEGVLFMPIFDEFNVDLVLSAHLHT YRNRGHVRNFDRDPSGPLYILTGIAGDARRPK >gi|292596541|gb|ADCV01000007.1| GENE 219 234580 - 235170 807 196 aa, chain - ## HITS:1 COG:BS_ytiB KEGG:ns NR:ns ## COG: BS_ytiB COG0288 # Protein_GI_number: 16080121 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus subtilis # 1 186 1 185 187 174 42.0 1e-43 MSLLDDILAHNREYVEDQNTGYVDTDTKCSKMPSREMAIVTCMDTRLVNFLEDSMDIGRG EAKIVKTAGNCITGPFDGVVRSLLVCIYELGVNEIFIIGHHECGMAKTTAKDLTEKMLAR GIAPEAIHMVRKEMERWADGFTHPAENVEDTVDELRMNPLIPKDVPIHGLIFHPRTGEIE VIVNGYTQMKQYYEKN >gi|292596541|gb|ADCV01000007.1| GENE 220 235355 - 235867 690 170 aa, chain - ## HITS:1 COG:aq_1851 KEGG:ns NR:ns ## COG: aq_1851 COG0440 # Protein_GI_number: 15606890 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Aquifex aeolicus # 4 162 24 180 192 102 38.0 4e-22 MEVHMKKRCISAYVENQIGVLAKISGLFAGKNYNLDTLTVGETEDSTMSRMTIDLTCDDL TYEQIIKQLNRSVEVIKVIDFTDMRITKKELLFIKVNSCKEADKQEIFRIAQTFDLLVVD YNRKSVLVQCVKTVSKNNDMIALFKDMFVNRIEVVRGGSVAIEALSTPDR >gi|292596541|gb|ADCV01000007.1| GENE 221 235876 - 237603 2054 575 aa, chain - ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 2 570 9 559 564 521 47.0 1e-147 MISGAQYLVKALQEEQVEFLFNYPGAATIDIMDELYKQDKVKVILPRHEQALAHAADGYA RSTGKVGVCMVTSGPGATNLVTGIATAYSDSVPLVCITGQVDLGLMGNDAFQEVDTVGIV RNICKYAVTVRDRKELGRILKEAFYIARTGRPGPVVVDIPKNIQKAMGSDEYPTEVNIRG YKPNTTVHVGQVKKACSIISKAKRPLFLLGGGVSISGANDLMMELVKKTGIPVVTTLMGK GAIDSRHPLYLGNVGIHGGYAPNVAITDCDVMISIGTRFNDRITGKLSTFAQNCKIIHID VDAASISKNIKVDIPIVADAKLAIEKILEYIEPHDLGDWPKQLQQLKAERPVTQADEEGL TPQTVIEYINHHYEHPIVTTDVGQNQLWTTQFLDVKGQYQMLTSGGLGTMGYGFPAALGA QMGNPDKRVFAICGDGGVQMNIQEFATAMHYRLPVTLIILNNGFLGNVRQWQQLFYDKRY ACTNLLMDESSIVTRDIIDNNEFEYVPNFVQLAEAYGAKAMRITKVEDIEKGFQLADTFK DGPTLLEFIIPTELNVLPMVPAGKSLSDMLLKDKK >gi|292596541|gb|ADCV01000007.1| GENE 222 237795 - 238073 408 92 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1314 NR:ns ## KEGG: Vpar_1314 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 92 1 92 92 182 100.0 3e-45 MKEILGFHLNGCPYCANAFRAIDELVAENPAYADIHINWVEDQDAHELFKTHPYEYYPNL WFDLDKQYEAQPGESYAQTKSLIKTVLDKALA >gi|292596541|gb|ADCV01000007.1| GENE 223 238151 - 238651 411 166 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1315 NR:ns ## KEGG: Vpar_1315 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 166 1 166 166 238 100.0 7e-62 MKTDMIVKTGMFVALTVLLSYIFAIHTTFIHITFGFLSTAIFGILYGPMAAGIMAAIACF IGMSLFGQGVFFPGFIISEFLVGYVYGYFLHGRNVTFKQLLLPETIVTVCIHLILNTIWL TIFYNKAVSAIFIGRLIKNIICFPLEIALILIVYKAVSKFMVQKKP >gi|292596541|gb|ADCV01000007.1| GENE 224 238641 - 238988 257 115 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1316 NR:ns ## KEGG: Vpar_1316 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 115 1 115 115 215 100.0 5e-55 MTVDEKRKLELKTMYQIIGIYCHNKHHTPKGQLCEECQKVWQYAEHRIDVCPHMESKTFC SVCKTHCYAPTYREKIREIMRYGGPRMLFISPIQVIRHMYLEWKDRKRSRTSYEN >gi|292596541|gb|ADCV01000007.1| GENE 225 238998 - 239813 1059 271 aa, chain - ## HITS:1 COG:MA0841 KEGG:ns NR:ns ## COG: MA0841 COG0500 # Protein_GI_number: 20089725 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 6 166 33 195 302 79 31.0 7e-15 MTNKIQELTVNETWRDEQDAWNHRSEYFVEMHNREDRKAQVTDFLAFLKDENLLPSSNGR TLDVGCGVCDYALGLAREGYKATGIDLSDGMIRGAKQLAESEGLDLSLYIGPWSDETRRE LGWDKSFDLAYSIFCPIMFDVENIRAMHDASNDKCLWIAFSERSDEMVDMLSEHFFGRDS FPWDGKMKECLDAIHEMGHNVKVTYKTVPETEVMSLEKAVNYFTMRLHNNGWGDMEDMKE EIRNLIEPLAIDGEIHNKTVDKVAWVSWSVK >gi|292596541|gb|ADCV01000007.1| GENE 226 240032 - 240115 74 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKYERIFATELVLDMDNSFTDVKLYIQ >gi|292596541|gb|ADCV01000007.1| GENE 227 240218 - 241006 968 262 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1318 NR:ns ## KEGG: Vpar_1318 # Name: not_defined # Def: LemA family protein # Organism: V.parvula # Pathway: not_defined # 1 201 1 201 201 235 63.0 1e-60 MLSTLLFLLTVFLVYLFIKQYNLLQNLSGEIRETRTNIMAFYEKKVSIINEFINLVNELD GYEKLTSLKLSNTFVEMTRETSKAVENITALVNQFPDLKAHTQYAEFQEYLRENDILISN KREVYNYQVKQYNSTLAQIPMVFAASLLGFKEAPFFEPNREGAFSEFSGADSKAIKDLAK KGCNKLKETTEKVSETLQKKEQEAQAKREERIRQEREAASNNEKVTAEENTDQEVPKAED TSEPDASKTGDSSTVVEKQEEK >gi|292596541|gb|ADCV01000007.1| GENE 228 241396 - 241854 632 152 aa, chain - ## HITS:1 COG:BH2238 KEGG:ns NR:ns ## COG: BH2238 COG0394 # Protein_GI_number: 15614801 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Bacillus halodurans # 1 148 1 150 160 134 46.0 7e-32 MTKILFICHGNICRSTMAEFYMKHIVNMTGLSDSIHIESAGTSREEIGNDTHYGTKQKLD EMGIPYTRRKARQVTMEDYHNFDYLIIMAENNGRNLRRIVGDDVDSKVYKAMLFIGESRD VKDPWYTGNFDETYDDVSRSCDALLALIKKNM >gi|292596541|gb|ADCV01000007.1| GENE 229 242020 - 242787 606 255 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794105|ref|ZP_06759242.1| ## NR: gi|294794105|ref|ZP_06759242.1| putative ATP-dependent helicase [Veillonella sp. 3_1_44] # 1 255 4 258 258 431 100.0 1e-119 MGHIVRLVDGHLVYDGLLSSQEKATVDEILETLQKEIPIIEEDLFQEYGKNVLYKYNLGL FLGELLERYNISVTDRRRFWDEIKTLATKENRKRNEGAKSVTRSFYQQCYILAQQEVEAV KKLSWRQWQDILDRVGNREDSRIFEWIKSLDEKIREDDWREFEKALHLYLKDKDTSVFSQ SELFEIYDSIMLMCKKWRQLFKVFEVSHPKSAKIKTKAMWAKKYYKLCFKKKKEERLRTI TDEICDIAFKELMEY >gi|292596541|gb|ADCV01000007.1| GENE 230 242797 - 245097 1169 766 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794106|ref|ZP_06759243.1| ## NR: gi|294794106|ref|ZP_06759243.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 766 1 766 766 1508 100.0 0 MNKMTAIPQNYKNNVEWILGAYEDAGVTFPNGFQKDAIQNAVGARKTNKWKNWSCNISVC KTDKGEFVIVEDSGTMGLTGANIPAEEINKLMAAGETLDSTQRLARFTSMFNSGGNATGG GLFGAGKSVYSVASDTYTYYFDSLREDGLYVANMNKCGQVQSVALENDEAKNFIYDFTGL VPKQNVGTRVIIESPKKELVESISNGDIVSYIQESWWLIIKRLDEGASISVNGKMVKVPS EPFNVEHIFELQNSEKYMDGYRVKHFGLYVSDTKDSMWHGISYYRKGMKIGDVDLKDIPE KINKKFWGYIEVDEAWEDGLSEIEDRVHFGVSKGKKNSKSYQNLKAFCNQMVQSLLIKWG YIKNQEYEDKKLKDNLTKIAEELQDLFGKLGYENLGIGLKKPDFDVRWQDIKYPAKGSEQ VTSGDEIKFSMRITSSYTIDKKFAYSLYVLSPDSGEIISYIDKDEIIIKPSDVFKKEFSH VINPDSSLRYSENRIILSVKVIGSGKEKKKELPYFYDINKLDNTRESVSLSLHECTFPIE GSRRVNFDDSITNVCYRIENKRNYTLNYKLNISIHNVMDNASKITDVGSFSGILNPFEEI FTPYIDHITFARNVYEKYLNEGMIQLRARLIANEDDEQFEKGDKITSYNLNIYLNMDDKN GQNDAFEVQSIDAPENYKRAWNQPGANRTIYLNIGHAAYHNMEAYPDLQMAYLREQMLKQ YVLLYLSEGRYDMFGDIDNNFLNLEPQEAAEQVLEKIEKIYHKSLE >gi|292596541|gb|ADCV01000007.1| GENE 231 245112 - 245348 145 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794107|ref|ZP_06759244.1| ## NR: gi|294794107|ref|ZP_06759244.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 78 1 78 78 107 100.0 3e-22 MKKDKESKRDKFVRLAEARTNKIIDMLQLLGNCSNTSTYSYTQSDVDKIFSTIESEVREV KKKFNKTESKKGARFSLD >gi|292596541|gb|ADCV01000007.1| GENE 232 245503 - 247086 970 527 aa, chain - ## HITS:1 COG:alr2276 KEGG:ns NR:ns ## COG: alr2276 COG0270 # Protein_GI_number: 17229768 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Nostoc sp. PCC 7120 # 316 523 168 392 431 102 33.0 2e-21 MLKTIDLFAGAGGLSLGFEMTGKFKVLAAAEINKNAQATYKKNIVEGKPTFTMIEDINGY DFMELNEKLGGIDVVIGGPPCQGFSNANRQKNHLISMNNSLVKEFFRAIKEIKPKAFVME NVSMLRSDTHRFYESISDNKEIDALIEDGFDIPKRLDSLFITNEKFENIDYTMIDDICLN RFLIPIEIFKLLNILYKNLSNERRLVRFLEKNRLGLIRRITTFLDEEIDASIKFRLQAIC DSLTNNNIENKLNSIEYIVNLQKVIHTIQEIKNNGLIGKFEIKGDSHLIFKVNSYSVIDY INAILGGEYSQIGSTVNAEWFGVPQTRRRYIVIGIRKDLYPNINPSLPGNPDTLNINTVE DAIMDLVSYEAGYEKDYKEIPYNSDDILSDYANMMRQGSGTVKNHITTKTSELALKRFEA IKPGQNFHSLSENMKNTYTKPERTQNTIYLRLKLNEPSGTVVNVRKSMWIHPILNRGLTV REAARLQSFPDKFGFVGTKDSQFQQVGNAVPPLLAKAIAQQILNYIL >gi|292596541|gb|ADCV01000007.1| GENE 233 247087 - 247284 156 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794109|ref|ZP_06759246.1| ## NR: gi|294794109|ref|ZP_06759246.1| putative transcriptional regulator [Veillonella sp. 3_1_44] # 1 65 1 65 65 119 100.0 6e-26 MAVERWVSMDEICEHMGVSRDTIKKMIKLQNMPAYKFDRKWKFKISEVDTWLHETYCLNS RNEDK >gi|292596541|gb|ADCV01000007.1| GENE 234 247506 - 249749 2643 747 aa, chain - ## HITS:1 COG:ycgV_2 KEGG:ns NR:ns ## COG: ycgV_2 COG3468 # Protein_GI_number: 16129165 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 472 680 136 352 413 61 26.0 5e-09 MKLQRNVSAVMAALVLTGMTCSAFATEINATSDKAEELLGLTMGSPVQTQPEVKHIEDTL TVNVHGKSLTETGKSKNVTGIYNGFGSQLTVDKDLVVRLKNDAPASKRELGHYYMSAVYA GYGGKVPRLSKDNPDRDYGDTNIHVKGNVDIDAIGVGLQANQRGHIIVEGGGRIITHPLE TSDTYSVVAEEGNVYVNTGSDGKHPGSKELVAVGNVGLINKDYGRDPNHNETPTNIALAF TTPNSKLTGAVLNEYAESNKNPHNSGADIYLQNGGTWNNEWIGMERPTPKRERPSGDNAA YLYKGSKVRNLVGGSSPSAAGILHPIDARPITIQNYSGYVNAVYKAGVPASENGKGNIVV EHAADNSHITLQGDGANLTNDDSYRKEIQALADKLQYTGNDKKLSTTVQINEGITRPGAV AELGANHFDSQGRLVVNDTTKINRASESSLVSGTKSALTSTAMAWKSNSNDLQRRLGDLR LANTNQGVWAKNIGGKSKITDGADAHMTNNGVQVGYDHKASNGWIFGGAIDYSTSSNSYA NGSGDGKLGGIAVYGTKQHDDGRYLDIIARGNRLSNDYKLYSVGGQRVNGDYHTYGTSLS AEYGKRIKKENGFYIDPSVEFIVGRLNGVSYDASVVGGGSMHVKADAVNSAVGRLGIGIG KETEKSNIFAKLALAHEFSGKANTTYSAPGNPTVQTTVDLKDTWLDAEIGGSWSVRPSTY LYGTFTKNFGAIVENTWRIDAGIRHNF >gi|292596541|gb|ADCV01000007.1| GENE 235 249896 - 250627 926 243 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1323 NR:ns ## KEGG: Vpar_1323 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 5 243 1 239 239 466 100.0 1e-130 MEVLMNKKILASLFAVGLAAGCVCSSVDAHGVFFANRLDEKALVLGEGPVDDAYSPEMVK SIIGLDNNGMVIPVQVIKHEKNVVVVPNDKLGITVTDFDYGYWTKDKDGKTVHKPISEVP GAQKSTHAIKYDVHYWNAEAKPFNNKDAFIQIIPSVNPLTLRKGDTYEIQVLKDGKPYAN APLIKDVINDLTNESQADANGKATVTVSANGLNVVGVEVGFPTQTKGEQNKYFSALSFII NPE >gi|292596541|gb|ADCV01000007.1| GENE 236 250881 - 252692 2578 603 aa, chain - ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 1 600 4 605 605 760 65.0 0 MIRENLRNVAIIAHVDHGKTTLVDALLKQSHVFRENEKVAERVMDSNDLERERGITILSK NTAVMHDGIKINIVDTPGHADFGGEVERVLNMVDGVLLLVDAYEGPMPQTKYVLRKALEQ KLKPIVVINKIDRPDQRVKEVEDEVLELFMELEADDDQLDFPVVYASARSGVSKTNWDDE AVNMEPLFKTLIDEIPAPQGDMEGPLQFMVTTLDYDNFIGKIAVGRIVRGKMKTNQQVAI MNGESTRKAKIGRVYTYNGLNRVETDEAEMGDIIAFAGIDDINIGETVADAENPEALPSI SIDEPTLSMVFSVNNSPFAGREGEFVTSRHLRDRLFREVETNVSMKVEETDSADAFKVSG RGELHLAVLIETMRREGYELQVGKPRVIFKTINDQLCEPLEALTIDVPQEFMGTVMENLG QRKAELTNMVELAGYLRMEFVVPARGLIGFRAQFLTATKGNGIMNHVFHGYAPYKGEIPS RTRGALVAFENGETTPYGLNSVQDRGTLFVGPNQDVYAGQVIGENTRELDMDVNPCKKKH VTNMRSSSSDEAVRLTPPRIFSLEQALEWINDDELVEVTPESIRMRKTILDRNARAKAAK NKK >gi|292596541|gb|ADCV01000007.1| GENE 237 252890 - 253837 700 315 aa, chain - ## HITS:1 COG:CAP0077 KEGG:ns NR:ns ## COG: CAP0077 COG1600 # Protein_GI_number: 15004781 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Clostridium acetobutylicum # 5 301 4 295 343 214 37.0 1e-55 MNTLLAQEIHDKALACGYDDCGIVPLDALDFYKERMIKRLEDVPESKKVYAHSNAFLTLK ENYPWAQSIVVCTEYFGDYKFPVSLRNRYAKGLLLSLSNIPHSDEFKRRQSFEVWLGENG IRYIGGETAKPAGIIPLRPASVAAGLGIYRKNNFFYGPKGSSYELVGYLIDKSCKYIQQL EIPPCPDSCNLCQQGCRTKSLSAPFTMNPLTCVSFINTFGDGKLPDGVIDDMLEAWILGC DNCQDACPFNADHDWSIGLDYPGLDELEPLLQPEYILKASDEEIIKKLIPKFCFHLTDKQ IPLLRKSAKRAIARK >gi|292596541|gb|ADCV01000007.1| GENE 238 253977 - 254906 1067 309 aa, chain - ## HITS:1 COG:lin1459 KEGG:ns NR:ns ## COG: lin1459 COG0812 # Protein_GI_number: 16800527 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Listeria innocua # 15 309 4 297 298 260 46.0 3e-69 MANNNQNIKVLQTALLEKLPCTRVREQELLCHHTTFKIGGPADLFIEPTTMAELSFTLRT IHELDVPVTIIGCGSNILVKDGGIRGAVVSVRHMTQIMDCNENTLCIGSGYMLKDASEFA WENSLSGLEFAIGIPGTLGGAVFMNAGAYDGEMSHVVTAVRAVDFQGNIKEYDGSHLDFA YRHSVFHDNHEVIGEVIMTLKPGDKDAIKARMDELTEKRESKQPLEYASAGSTFKRPPGY FAGTLIEQTGLKGLSVGDAQVSHKHAGFVINTGSASAKDVLDLIAEVQRRVYDRHGVHLE PEVRMIGED >gi|292596541|gb|ADCV01000007.1| GENE 239 254881 - 255246 644 121 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1327 NR:ns ## KEGG: Vpar_1327 # Name: not_defined # Def: protein of unknown function DUF964 # Organism: V.parvula # Pathway: not_defined # 1 121 1 121 121 174 100.0 8e-43 MNYDKAHDLAHAMRESEEYKELMAAQEAVKADAVATGLVRTFMAQQMQWEYAKLSGAPEA DELQKKQEELMPQIQENAAAAAYLQAQMRWSQISNDIYKIISEPITEGMKVLDHGEQQPK H >gi|292596541|gb|ADCV01000007.1| GENE 240 255352 - 255837 580 161 aa, chain - ## HITS:1 COG:FN0809 KEGG:ns NR:ns ## COG: FN0809 COG0219 # Protein_GI_number: 19704144 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Fusobacterium nucleatum # 1 148 1 148 150 186 58.0 1e-47 MEIVLYEPEIPGNTGNIARLCAANHMTLHLIKPLGFSIDDKHVKRAGLDYWHLVDVQVHE NIQELYEKYPDRRYFYATTKAKHTHSEVKYEIGDMLVFGPETRGLPESLLDGKEDTCIRI PMVDEARSLNLSNAVAIIAYEGMRQLDYPDLKAEGNWIQSK >gi|292596541|gb|ADCV01000007.1| GENE 241 255866 - 256378 703 170 aa, chain - ## HITS:1 COG:BH3023 KEGG:ns NR:ns ## COG: BH3023 COG0315 # Protein_GI_number: 15615585 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Bacillus halodurans # 2 167 3 160 165 168 56.0 5e-42 MDLTHFDQDGNAWMVDVSDKDITTRTAVAEGFIAINDAIYERIAAGTIKKGDVLSVAQLA AIMGAKQTSNLIPLCHPLALTKVEVHCTLVAGESPACTDATHNRAVKVHATVKTTGKTGV EMEALTAVQVGLLTVYDMCKAIDKGMIIGPTYLVEKEGGKSGHFVRSFVE >gi|292596541|gb|ADCV01000007.1| GENE 242 256487 - 257164 910 225 aa, chain + ## HITS:1 COG:BH3178 KEGG:ns NR:ns ## COG: BH3178 COG2220 # Protein_GI_number: 15615740 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Bacillus halodurans # 4 223 2 226 226 184 42.0 1e-46 MKTKLTYFGHACFMLTRGDVSMIFDPFLTGNTWDIAKKEDIKCQYIFVSHGHDDHYGDTD FIAKANDALVISTAEVAGKAAAAGCRTHAMHLGGKFDFEFGSVRMVPAFHGAGIPGGHAA GCIVDFYGDILYFAGDTALFSDMKLLNRFGEIDYALLPIGDNYTMGVEDAALAASYVKAR ISIPIHYKTWPVIDREPGVFTSLVEGKYNQTALIIDPGSSIELNN >gi|292596541|gb|ADCV01000007.1| GENE 243 257272 - 258915 2023 547 aa, chain - ## HITS:1 COG:CAC1857 KEGG:ns NR:ns ## COG: CAC1857 COG3864 # Protein_GI_number: 15895132 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 111 517 18 428 456 240 33.0 4e-63 MQRNLDKDDIRDASDLLTHIDGWEKTGSYDAKAIEALDRWHAKRERIHREAEALYTQIYA SYEAYVDSYEEQHHSMAPERIAADLMNHNMSDSHIGTIGRALEDVQVEGTDLSVMQQAVM TPAYEQRLWNILHDVNSLLLEEDQFFGYFYLQMTHRIRFDMASAFGINLKQGGYVLYVNP FILLRQSPDVMKDGIKREVLHIISAHLMRVKALSQGFHKTAVHMAMDMVVNDYLEHVDRD AVTVANVNARFGLLLKRFRTIEYYAKAIDKVMKEKPDLFVPIDNADTAVAMEFDPQTSHD IWDASDSIDTDTMDQITERYINEASKGDMEGYVKSLIDTFQKTRRALPWYFYLKKLMGKV ASGYKKTTMRRNRRQPERLELSGTLRQHKANVWVALDMSGSITDVEFTNALEQVLQIVHA YNHRITVVECDNEVRRTYTMESVKDVKPRLDVRGATAFTPVFSLANQNRVDLLVYFTDGK GEERLRETPRGYKVLWVLTGENPQLSLLNPYGMVRELGYVGIDETQDIDEFVRMVNRGGF SMANQEI >gi|292596541|gb|ADCV01000007.1| GENE 244 259051 - 260151 1338 366 aa, chain - ## HITS:1 COG:CAC1858 KEGG:ns NR:ns ## COG: CAC1858 COG0714 # Protein_GI_number: 15895133 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Clostridium acetobutylicum # 1 362 1 369 377 304 43.0 2e-82 MNFIDTMASVELVLAANQVPLLVGETGIGKTSLATRVAEAHDWELVTIDGNLLKEGEIGG LPTVETVTHTDGHGNTRDVKTTVYAVHHTLEHVAQAVDKGRQVLLFIDEINRAEHAVQQE LMNLILNREINGFSLSDQVRIIAAMNPEDSFDYQTIDMDPAQQNRFVWLYMNADYMQWID WAIGAGIEEKVIEFISSYPEYLNQRHEDDIDATPRSFERVSGLYRIYKNQEGTSYSRDIF MNVIRGNVGKLIAEAFVNFIESDQEPLITFDDVLTAVQKPGAIMSMAEQVKGESPTRLYV AAKNMLHRLNRNSNAQEVHHFVEFLTLYPGDLRVAVMKDLRNTYERVYAYAIEDDLFVDI FFEAQK >gi|292596541|gb|ADCV01000007.1| GENE 245 260164 - 260970 788 268 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1333 NR:ns ## KEGG: Vpar_1333 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 268 1 268 268 479 97.0 1e-134 MTEEQYITALTNNPHGIRNIPNPTEAMQLTCVGQNGMLLQYIKEPTQKVIETALSQAPRA IQFVENPTEELLKALVEKDWAVLEYIDNPSDTLIQSALAQSGWAIRYIANPSEELQLEAV KANYDALQYINTPSEAVQLQAVQESYLALRYIDEPSVTVLEAAVKQDPQAMRQITNLTKD LALHLFKVSAAIVGYIPNTLGVTVDEIKAIIVDAISGDTVDEDYIRELINNKAIGGRQSK WPIDLLSLIDAYGTKIVKKIAVGEYLKY >gi|292596541|gb|ADCV01000007.1| GENE 246 261083 - 261733 596 216 aa, chain - ## HITS:1 COG:BH0467 KEGG:ns NR:ns ## COG: BH0467 COG0569 # Protein_GI_number: 15613030 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Bacillus halodurans # 4 211 7 214 222 172 41.0 5e-43 MKYKTIAVIGLGQFGTTIAKMLASMNHEVLGVDINPEIVQKVSPYVTHAIVADTTDEEAI KALALSQFDIVIVAIGDNIQANLMTSMLLKEMKMPHVVSKAENALQGKMLKKMGVDMVIY PEYDVAQRLAQSLTREHVMDYLQLSKSISLIEVDMPKFLVGTCLKDSNLREKYNLNAVGI RRGEDLEVPPNPFTILSAEDKLLIIGNNSDLDALTV >gi|292596541|gb|ADCV01000007.1| GENE 247 261769 - 263130 1323 453 aa, chain - ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 10 435 8 428 445 268 38.0 2e-71 MWHDISHSHVQRYMQQNPYRLLAFSFLGVMIIGTILLMLPMASAQGQTTALVDAAFTAVS CVSVTGLATVDTYYHWSLFGKIVMVILIQLGGLGIVSFTTIIALLLGKRVGLKNRVLLSE DVGQDGMTGLLHITKKLTLYTFAIEIVGGIIYTIQLYPYIGQAALYTGIMQAISTFCNAG FVFFDNDLPYAMVGDILFNINTAVLIVIGGFGYLAAFDIWSHRKVRRFVDLKLHTKIMLV GTAILILLGTIIFLGVEWSNPKTFGSLPIWNKIMASLFQAITPRTAGIATVDYNALHPIT LFVTIILMFIGAGPNSTGGGVKISTVAVTILASRTLFNNRPDTEIFERRISLVTVLKANG IIFLSLLLILIATCYLAWDEPYDFIRLLFEVTSAFGTVGLTTGITPDLSESSKWVLMLVM FTGRVGVMTVIGTWALRTSPTKPIGYAEENVLL >gi|292596541|gb|ADCV01000007.1| GENE 248 263137 - 264141 989 334 aa, chain - ## HITS:1 COG:APE0012 KEGG:ns NR:ns ## COG: APE0012 COG0524 # Protein_GI_number: 14600388 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Aeropyrum pernix # 9 329 6 302 310 83 23.0 5e-16 MSTCPQKEIDILGIGASTLDRFIVVDHYPTGREVQQVVSSTTDGGGPVATALAVAGKYGA RTAMIDSIGDDMVGRHILDDFKKYNVNTDAIHIEKGEKSGVATILVKHSTGERAVFFERS TAPEPVFLDTHKQLIKEAFILHVNGRHRQFMCSAMALAQKAGTIISLDGGAQRYDEEMKS ITESSHITIVARDYAEKYTGTTNLEEACRIIHDRGALIAGVTDGANGSYFVWPDGTFYRC QAFPQEYVVDTTGAGDSFHGAFLSKLVTLLRELAPVEGLKTSTYGIDLLQYCGHSDLERA AIFASAVAALNTQGIGGRSPLPSLQVVHKLMGLE >gi|292596541|gb|ADCV01000007.1| GENE 249 264481 - 266121 2000 546 aa, chain - ## HITS:1 COG:VCA0909 KEGG:ns NR:ns ## COG: VCA0909 COG0635 # Protein_GI_number: 15601663 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Vibrio cholerae # 3 446 6 443 455 316 40.0 9e-86 MSLASFFESIPEKQRNLQLGLECDNPMSGAFPHKRVVHAGLNGTLVSPKETQAVWDSLMN GTPKKGEMQCAYIHIPFCKTKCTYCGFFQNGTSQSVEDQYIDGLISELKLASERSRLKDG LIHAVFIGGGTPTSLSPTNSERLLKAIKAYLPLANDYELTLEGRIHDLIPENLEVWMANG VNRMSIGVQSFNTEVRQMVGRLDTKETVLERLAALKAYGQCSVVIDLIYGLPGQTMEVWE QDLADLVSSGVDGADLYQLNVFDGSDLNKDITNGKVPAAATTAMQGDMFEFGRKYLDERS YRRLSAAHWSANNRERSLYNTLAKSGVPMFPFGSGAGGNVDGYGMMLHRALKPYEDMVTR GEKPFMALMKQSDLQPIVNRVVSQLEQGFLNIMSLVKMDSRLDELNWLYKLWEKRGLVAY NGLLYKLTDAGEFWTVNLTQSTLEAVEYIMTGKNSFAIEAVAAQDTKTTSKENPNQEVRG IGQGKANISVPTDEDSEAQRKEALITKAKAEIAKSGASGEAAERMVQAMYNLSADEIEYM MERMMS >gi|292596541|gb|ADCV01000007.1| GENE 250 266143 - 266661 848 172 aa, chain - ## HITS:1 COG:FN0772 KEGG:ns NR:ns ## COG: FN0772 COG0716 # Protein_GI_number: 19704107 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Fusobacterium nucleatum # 1 167 1 167 169 120 37.0 1e-27 MKSIILYSSLTGNTKSVAEAMASVMPEGTPCVPVKDAPENLADYDTVFVGFWVDRGTANK EAAKLIETLKNPNVVFFATLGMYADSDHARESIEKASELLPNKEALVDGFVCQGKIDPKV IEMMYKMFPPGSAHGQSPERDALHKAAETHPDEQDFANAKEFTKSVLAKLQA >gi|292596541|gb|ADCV01000007.1| GENE 251 266690 - 267493 1060 267 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1339 NR:ns ## KEGG: Vpar_1339 # Name: not_defined # Def: TonB family protein # Organism: V.parvula # Pathway: not_defined # 1 267 1 267 267 363 99.0 3e-99 MGLGISWKKAAIISAVVHLIALFIAVIFFVVVPAIQEMDTYEIDLTQSVLDDGGSGHAGG GGGNRADLFPKPLSADEVAARTKAVVANVEPSTATDIPDAVDVAAKASENKGNTSGDNSA VGGTGPGSGGGSGGGHGTGEGTSVGDGRGHGTGTGDGTGEGDGHGTGKAAFNVEGFYAAV DSQKQIPYAAIKRKMNVDVTINVMAKLDTNGNLIDVYPTSGGDEIFVEAALDAVRRATPY PNETGDIQPVEVPVHFVVQADGEDEEE >gi|292596541|gb|ADCV01000007.1| GENE 252 267496 - 267903 551 135 aa, chain - ## HITS:1 COG:all5046 KEGG:ns NR:ns ## COG: all5046 COG0848 # Protein_GI_number: 17232538 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Nostoc sp. PCC 7120 # 16 134 15 134 134 76 35.0 2e-14 MNLQSFRMKTKPEFMIIPMIDIIFFLLVFFMMNSLQTVAQKALSVQLPQATSASAPAQLP VVLTLDAEGHITIDNKPMSIDDAEAMVKQRIQENPNASVILQADKRAAHGQVVAIMDMLK QSGVKRLAIAAEQKG >gi|292596541|gb|ADCV01000007.1| GENE 253 267906 - 268523 688 205 aa, chain - ## HITS:1 COG:FN1312 KEGG:ns NR:ns ## COG: FN1312 COG0811 # Protein_GI_number: 19704647 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Fusobacterium nucleatum # 7 201 1 201 202 82 29.0 5e-16 MENLNYVIHLFHSGGYVMYPLLLLSFMVIAIAAERAFFYRKYAGKTFVVTHAVNEFAKLQ RWDEIDKVIKENPSIASRIAEAGLKNDSSEEAMKTAFADQMGVDAVGFRKYMDYLSATVT ISPLLGLLGTVTGMIGSFSILDSGAGASAITGGVGEALIATASGLCVAIMAFIVYTIFSH RLDSIINQIENMCVNIVTAKREGWK >gi|292596541|gb|ADCV01000007.1| GENE 254 268559 - 273637 6472 1692 aa, chain - ## HITS:1 COG:STM2199 KEGG:ns NR:ns ## COG: STM2199 COG4771 # Protein_GI_number: 16765529 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Salmonella typhimurium LT2 # 17 193 10 189 663 87 32.0 3e-16 MNRWGHTKRTIILSSAVALWLSAPLVVWADNATVTTDVVHVKGTWAEEEAKLNSQQVQII TKKEIEKKQAKSVEDIIFTQTGVSRTVDAMGRVGVSIRGAEARHTLILVDGQPVLGDFDK YSGAADEVQRLGTENVERIEVIQGAASAKYGSDAVGGVVNIITKKAQKKPSVQFNAEGMR RKSDGDVFPFQNFFIRADSGQMGKLKVGLSGSKRDLMPVLASVKRRASGMAFDYAKHNFK PNVLRYYGDAADIGLVATYEANDKNKVELRLNRYTEDLVRDVKHSDSDLEPQQHFKRTAD RNTANLQWSSRAGKSDWTVETNYSRIKENDVALINYTGRSAYEGSNELRYIDNIDHRQLD IRVNANTQVNKNHLLSYGVSYAREEGSGSRLKSSPNTSTMYIDPWDYDKSLLVDRLDRLV RRKGDNSVKVYSHIHDYKFINSGGGMPQWDMDYEYYGAGNDAQKPGITYDDYVNYGLSES RLSEWSSTSPNNQPVTDEFKKRYYALENRLKSENPEMAAHRANIVGDYFKYGESNDPEMR KKAPKLNGKAFLEEYRNRDQRLTTGSGTIRKINAYISDTWQVNKNLTLSPIVRFDNSSLF GSNVSASLGMTYNVKGNTHRRFKANVGTGYTEPGMGELWYNWEMYASNPVGIGVAKLGWY WAGNPNLKPEKSVNFDMSLEGENKNTYARVGVFHNRIKNYMSVYFTGDFMDFAPYLKGDA KYQRAPDMIYSFKNIGKAEITGLQAEVQQKFGKYWSGKLGYTYLHAINKSDPSMPRQLLD KPMHKVDIGITYDNPKSGWNGSIWGDYYINMLDSNTLNNGGNYWPDILSGDAGVYKKQMY EKKTFGIWNVMIQKRFNKNAMMYFGINNIFNHRDDDRATQERVYRMGVNLKFGGGDGSKT TAIGKTKNGANVNATGANIANGEVVNSESGVQNVADVVRLTDFIRSDFDTTKERGITMVG DYRARWMAHDGSNRPQSPFRANSAIGSAKANMYDANRHSFEQRLRLGFDARLNEFTNLKV IGSMSGMSGVDTSWTKSDSKGLNHQRLDTVDLTRRVKKWDVSVGRLTEPMGASGYWFGQS YDGVRAVWNGHDSQVRIGVGTFKHSTGITDSAYTHAVHKVIFRPPTAAELIGINRDDYPY DIESATKTGSDGEKKTSTDPAAPDSPTGIYNSTYKGKTDSLYFYQQLKDLQAEYEAYKES LDLRWSNPNRDQEIEKANAKLAETQKKQAQIMGRLQDILTKAYPTDMAGTKFSLDIPSGG YAMYEITNKKTGEKLYKTGDIMYNVNSPLYPESMKEKAKGLIVSSDNKEALLNPKEYVDK HAAEINQSITEIAKYNAKDNWSNYNNSGLDEVWVKQADGTFKRSYDYYGQPSSDYEFTGF LGAKTYKYDSGKYVFSDYDAKDAIYKKNFTMSSGDYGEGGSYYGWGMPNALFNYMYNLEK VVHDAESENKLPREAIGKVIGNLIRTEGVVLEKDTVPAIDKAAFIQYKKQIGARLGLQAW YLRSFGGKTHTYLNANGNSNDEYSFSNVAHVFGIGAKYQLGTNAAVTVDYGQNRSNLGRY LNGNTVYQHERGTADFTLKGHQMGGTPHFWMARLDIGRADLDVPKSWNAFIDYKYFEHGS FFGGNGTGAVPDRYLDGVRSFTFGAGYVPRKDLLLEAFYTFDAKGTNKRDTLYGSESFKL GDYTRIQGTYRF >gi|292596541|gb|ADCV01000007.1| GENE 255 273749 - 273817 62 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDLSETYIFGLFGVDMQDTLC >gi|292596541|gb|ADCV01000007.1| GENE 256 273823 - 278844 4043 1673 aa, chain - ## HITS:1 COG:ECs3047 KEGG:ns NR:ns ## COG: ECs3047 COG4771 # Protein_GI_number: 15832301 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Escherichia coli O157:H7 # 16 310 13 297 659 87 26.0 2e-16 MNRSWVRARRYVILSCAVACWLQMPVVMADNATVTTDVVHVRGTWAEEQAKQESQQTTII TKKDIVKKQAKSVEDIVFSETGVSRTVDSMGRVGVSIRGADPRHTLILVDGQPVMGDLAK YQGAGDELQRLGTENVERIEIIQGAASAKYGSDAIGGVINVITNKPRKTAGLQFNAEGRR TKGDGDIVPFSNFFMRADSGSLGKLKVNIHGSKRDIMPIYASEQRRISAMTNDEDHGFLK NSLRYYGTNSNIGLAATYDINDKQSLGVRIDRYNEDLERYVKRSTSYLEPQVHYKRDLDR NNLNLTYTGQDNKSSWKAELNYTRTKEDDVTLTSDYGNSTYEGKNTLNYVDNVDHRQWSV TLGADTQVNKKHLLSYGIGFIRETGEGSRLKNAPHTYKRHIDPWDYDKSLAVKNGVPSST IYDHSFRKNDAGVEQWNKEKEWYNGDKSKPNTLPEFTYEEYLQYLDPQAGIDSAAVMGLV DGPVTERTLKKRNPEAYARYQQFAKRLLAENKEFIEDYHFNKEGRKDENGKYYPALYDAY LPSFYYGAVPDFDSTKLKLNGAYFKEEYLKRVNQQTAGRAEIKKQNFFIQDTWQVNKNTT LSPIIRLDHSDLFGSNWSFNFGMTHNVHGNVHRRLKANVGTSYTEPGMGELYYNWEMYGP NITNATIGGGEARLGWYWVGNPNLKPEKSMNFDLSLEGENKNTYGKVTVFHNNIRNYMSI YNTGYLMDFYPQYDESTTYGAAKFAHAPDMIYSFRNIGKAQITGLQFEVKQTLNKHWKAR LGYTYLRALNKSDKDMPRELLDKPRHKVDIGVDFEDKASGWSGSLWGDYYIHMLDSNSLS GGGNYMVSYIDPNNSDRSVIRYNLNNRRTADMYEHKTYGIWNLMIQKKIDKDSRIYFGID NLFNHRDDDRALSARVYRIGLNMKFGFGSGESKTKLTKEQFESLPPVMLQDFITRPFDTD RKRGMELVGDYRVRNDSHLGSDRPATRVTTTSYVSDEAAKNLADRKEHGLNQRIRVGVDA RINDNTNVRVVGSASGQAGVDSSHETEGSKGFNHQRLEELDVTHHGSKWDHSVGRITESM GVTGYWFNKEYDGLRSVWTNKNTQVRIGVGTFKHSTGISDSAYTHAIYTHFKRVPTVEEF LGVTMDSDGANKELIVPNAGNTINFYQQLKALRDKEGTLDAEVGTVKKKIDDMTSDIWSK EFIDGMSADQLAPLKAELAKLEASLPDVEARVAKEREPLRAAQFDVLRRMQEIAVKAYGA DAAKQTVSIKMPDVSVTYSYKSRYYDEDDEQWYEDERTFTQKIAPGTIGLDKKNPLFEMK LSDTSVLANGGKPFISNWYNQNKAAIVEAYRAKAKDIATYSFGNNPYTMKFEDNAFDGLD ESIYKANVVDINDSGTSGLINVKGSAYYPSMIASYFNSLARMLEKADGNSRLPREALGKY TGAVIPSIGVVLERDTIPPIEKAAYVQVKHMVTPRLGLAAWYLRSFGGSDYRFYTANGNA TEAHEFNNMANIFGVGAKYQLNHNVSISFDYGQNRSDFGRFMNGNTHYDHKAGSAQFDIK GRDIGGVPHFWALRFDIGRADMNKPGSWNAYVDYKYFAHGSFFGGNGTEAVPDRYLDGIK SFTFGGGYVPTKDLLLQAFYTFDAKGINKRDTLYGSENFKLGNYTRFQMTYKF >gi|292596541|gb|ADCV01000007.1| GENE 257 279077 - 279967 579 296 aa, chain - ## HITS:1 COG:alr2587 KEGG:ns NR:ns ## COG: alr2587 COG2207 # Protein_GI_number: 17230079 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Nostoc sp. PCC 7120 # 132 293 159 321 327 83 30.0 5e-16 MNPHNHAASHAGTSMSRYTVFDGIDLMFLDVKQETIQFYAKSHTKTFAINHCEEGRIECK FSSGEYLYMGPGDMSLGWHIRADYQHENYFPTKLFKGIVLLVDVEKAQSVLDALVSDSRI DLTELANRFCEHSDFGMMMEETETVRHIFSSLYNVPDQIKEHYFKLKVIEIFLLLSVIST ANPEKRSTYRKQQVDIVKAVSEYVSTQFMKRITIDSLSEQFDIPTSTLKRCFKGVFGTTI HQYLKECRINAAKRLLQDSDQSILEIANAVGYENGSKFTSAFKEATGVTPSAYRKV >gi|292596541|gb|ADCV01000007.1| GENE 258 280225 - 280620 355 131 aa, chain - ## HITS:1 COG:PM0679 KEGG:ns NR:ns ## COG: PM0679 COG2832 # Protein_GI_number: 15602544 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 12 102 1 91 120 65 40.0 2e-11 MKTTEQHRNVVVRYVFLTIGAISFALGTAGIVLPLLPTVPFYMLTLFCLARGSERLHKMF LASSLYQKTVAAYERDKALTLRTKLSILISVSAIMTIGAYFSQDMPIALIVMGIIWVAHI IALAFIIKTKK >gi|292596541|gb|ADCV01000007.1| GENE 259 280620 - 281594 1155 324 aa, chain - ## HITS:1 COG:SPy1949 KEGG:ns NR:ns ## COG: SPy1949 COG3037 # Protein_GI_number: 15675750 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 23 244 154 378 411 279 68.0 5e-75 MPYVCRTWYCRFIWYGTHTCRWFLNGAWSAISPAIGQSYTSKVTDGDEIAIGHFGSLGYY LSAWVAKYVGKAEDSTEDIEIPEKWGFLRDSTLSTALTMIVFYLIAAFAAGSEFVATLSG DMSPYLYAVMSAMNFAVGVTIVYSGVRMILGDLIPAFQGIATKIIPNAIPAVDCAVFFTY APTAVVLGFLSSFIGGIIGMLILGAVGGVLIIPGLVPHFFCGATAGIYGNATGGRRGAAV GAFLNGLAITFLPALALPVLGQLGFQNTTFGDADFAVMGLVLGNAYEWVGMAGIYGIVAI AALVLIVPNFIKTKGKVINYVEED >gi|292596541|gb|ADCV01000007.1| GENE 260 281465 - 281986 506 173 aa, chain - ## HITS:1 COG:SPy1949 KEGG:ns NR:ns ## COG: SPy1949 COG3037 # Protein_GI_number: 15675750 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 157 1 157 411 214 70.0 5e-56 MEMVLEFLRDVLSQPALLIGIMSCIGLIALKRPFHKIMTGTLKPILGYLMLAAGAGVIVS NLDPLGKMIEHGFHITGVVPNNEAIVAVAQKVLGVETMSILVVGLLMNLCIARFTKFKYV FLTGHHSLFMACLMSAVLGTAGLSGMELILVGGFLMGHGLPFLQLLVKVIHPK >gi|292596541|gb|ADCV01000007.1| GENE 261 282016 - 282291 546 91 aa, chain - ## HITS:1 COG:SPy1950 KEGG:ns NR:ns ## COG: SPy1950 COG3414 # Protein_GI_number: 15675751 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Streptococcus pyogenes M1 GAS # 1 87 1 88 94 87 57.0 4e-18 MISVLTVCGNGIGSSLMLKMKIEEICAENGIDAQVESIDFNAAQGRKADLIVTVKELAEQ FDDKNVAIVRSYINKKKITEDVLEALKLAAQ >gi|292596541|gb|ADCV01000007.1| GENE 262 282312 - 282767 656 151 aa, chain - ## HITS:1 COG:ECs5171 KEGG:ns NR:ns ## COG: ECs5171 COG1762 # Protein_GI_number: 15834425 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Escherichia coli O157:H7 # 2 129 3 132 154 108 42.0 4e-24 MIQDLLSEDNVSFHYPAETWEDVIRHGGQLMVDAGFTDPSYTEAMVEVVREMGPYIVLAP GLAMPHARPEHGAKRVGTALVTLEKPLNFGSPDNDPVSVALFLCAPNKDEHIQLLTDIAT LFEAEEFLDAAVDFESIDDVQAFLAEHLDEQ >gi|292596541|gb|ADCV01000007.1| GENE 263 283020 - 284027 1073 335 aa, chain + ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 51 330 61 338 345 179 38.0 6e-45 MQTSVKVFVLCLILCISLVTALQFGAKFISLDQIISALLSMIDVNATASMTNTIITDIRL PRLIYSVLTGIGLSLVGLLMQTVTRNALADPYVLGVSSGASTGAVFAIIMGGLPFLGQYN TPIFAALGAALSIILVLLCVGKSNSPVKLILIGMGMTGVFSALTMMIIYGAKHEAQVRSA MFWLLGSFAGIQWGDLPLTAIIVILFMLYIYMFNQDLDVLLLGNHEAAQMGLSVKQLQLS IVIISSVVIATLVSKVGVVGFIGLIIPHLARIIGGPKHKHTLLFSALIGSIVMIWSDVLS RALYSPEEIPIGVLTSLLGAPLFIWIIMNRYKHNG >gi|292596541|gb|ADCV01000007.1| GENE 264 284054 - 284800 234 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 221 1 226 245 94 27 4e-18 MYQINQLSFSYETKEVLKNISVTFPTNKITAIIGPNGCGKSTLLSHLYRLHPSKNKITLN EKPLESYKGREFAQLVAVLTQSRDAMIDDFLVKDIVLMGRYPYKQHFGTYSSEDVKIAEH YMNEVGITHLSNEEIHHLSGGEKQRVFIAKALTQKPQILLLDEPTNHLDMKYKVALMKQL RAFKGTTIVVLHDLNLAAQYCDHIIIMNNGTILKEGSPTEVLTPEILEPIFEVPFKTSWD EGRYHLYY >gi|292596541|gb|ADCV01000007.1| GENE 265 284822 - 285826 1275 334 aa, chain + ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 60 333 20 285 286 179 38.0 7e-45 MFQNLRKSKKLLLIAMTCATFAIAGCGSDTTKTTGDNGTSVTWSETFDGTKTDFAVKSAP THAVSMSQATTEMMLQLGLEDKMAGTAFKEEEIYPPLQAAYDKVKVLSDKWPSYEVFMSV KPDFTTGWPDSFSKRAIPADKMISQKVNIWIPESMLSTKADLETNFSDMIKLGEIFGVKP KAEEWVAGQRKTLAAIQDKLKDLPRKRVFIYDSEDGQPFTAFEGYTTNILKLIGADNVMS GLGVDKTWAKGSWETVIAQNPDYIIIADYGNSIRNDDDFQQKIEKIKANPQLQDITAVKE GHFIRVKLSEITPGVRTVDALKRLAEEIHGIKVD >gi|292596541|gb|ADCV01000007.1| GENE 266 286058 - 286231 194 57 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1352 NR:ns ## KEGG: Vpar_1352 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 57 1 57 57 96 100.0 3e-19 MAWGGSRRGAGRPRNPIKRIGRTFRLSDEEFLSLKPLIMAIKANNDKRYRQQYSREV >gi|292596541|gb|ADCV01000007.1| GENE 267 286661 - 287659 1059 332 aa, chain - ## HITS:1 COG:lin2351 KEGG:ns NR:ns ## COG: lin2351 COG0306 # Protein_GI_number: 16801414 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Listeria innocua # 2 326 1 327 332 284 52.0 2e-76 MLDAHYLVWLVVFLALAFDYINGFHDTANAIATSVSTRAIEPKKAIMMTAALNFLGAMVS TGVAKTIGGDIVMSPSLIDSGIISAALIGAITWNLLTWYWGIPSSSSHALIGGIIGAVGW SVGFDALNEAGILKIFLSLILSPIVAMIGGYIVMKVLLLIFGRFSPIALNDRFRSMQIVS AIMMAFSHGSNDAQKAMGIITLTLLSGGFIDTLDVPIWVKLCCATAMAMGTAVGGWKIIS TMGTKIFKLETINGFAADLNSAITIFTATFLHLPVSTTHVVSGSLLGVGSSKRIKAVNWG VARSMVMAWFVTIPLSGIVAAIAYEVGHLLFG >gi|292596541|gb|ADCV01000007.1| GENE 268 287652 - 288281 797 209 aa, chain - ## HITS:1 COG:RSc1312 KEGG:ns NR:ns ## COG: RSc1312 COG1392 # Protein_GI_number: 17546031 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate transport regulator (distant homolog of PhoU) # Organism: Ralstonia solanacearum # 9 209 9 208 208 94 29.0 1e-19 MAFKLKGKEEKFFSILEKHAALTYESAEMMERVFKGDISKEEAFLEIDTKEKAADELVNE TVERLRKTFITPMDREDIQLLIDQLDTTLDNIKEIMDKMVMYHVGKPSDGAIRMSEIVVK CVKHINKSIGYMGSLKKDHVKVEGRVHQVLKLESEADNIYHEEMAKLFTECTDPIEIIKW KEILSAMEDVIDGCEDLVGTFRRVVLKYA >gi|292596541|gb|ADCV01000007.1| GENE 269 288553 - 290022 2086 489 aa, chain - ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 91 453 14 364 372 320 47.0 5e-87 MSKYQFLDRRVPIEDGNIALVQDLTKCKNCSLCRKACAVDMGVFDYYDLTTNGDHPICIH CGQCASICPFDSINERSEIDEVKAAIADPNKIVIFQTAPAVRVGLGEEFGLEAGTFVEGK MVAALRKLGGDYILDTNFGADMTIMEEASELLERVINSDAVLPQFTSCCPAWVKFAETFY PEFLPNLSTAKSPIAMQAPTQKTYFAEKMGLDAKQIVAVAVTPCTAKKFEIRRDEMNSSA EYWDTPEMRDTDYCITTRELAKWLRAEEINFDDLEDSAFDPLMGEASGGGIIFGNTGGVM EAAMRAAYKMATGEDAPQTLIPFEAIRGMDGAREADVVIGDKTLHVAAVHGTGNLRKFIE HMRAENIHYDFIEVMACRGGCIGGGGQPRVKLPMADKAREARIASLYTRDAEVTVKAACD NPDIQKLYAEFFDGKPMSHKAHHMLHTTFVNRSEDLGPNGACTPATCPTSVPNLKKAAEA AKAAAEANS >gi|292596541|gb|ADCV01000007.1| GENE 270 290155 - 292101 1536 648 aa, chain - ## HITS:1 COG:CAC3012 KEGG:ns NR:ns ## COG: CAC3012 COG0488 # Protein_GI_number: 15896264 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 646 24 624 632 454 40.0 1e-127 MTFTTEKRLGLVGINGTGKSTFLKILAGQMEADKGTIERNGKASIYYLAQTPDFDAEATL LEAVLDGNHPRLQMVKVFERISREYRQMQESGKDDAKISRNYMNALEQMDQQDGWQVEQE ARIILSKLGFPDVEQKVAMLSGGQKRRLALGQALLYPCDLLLLDEPTNHLDEDSIDWLES YLSVRQGGLLISTHDRYFLDSVCNGILELSNRHMYQYDGNYEEFIALKADREAREAATEE KRRQFLKREIEWVRRGALARTTKQKARLDRYEKLKNMEKTRRPDQMDPIALKTRLGKTIF DIEHLEFYFDERPMIKDFTYHVVRHDRIGIVGPNGVGKSTFMNILDGTYEATRGTIGKGE TVRIAHFKQELPEFDEDMRVLDYIREDHSYMVLGDGSTLSAGQILERFLFTPELHGVPIR KLSGGERRRLYLLKLLMSAPNVLLLDEPTNDLDIPTLEVLEDFLDSFSGVIITVCHDRYF LDRVVDKLFVFTGDGHIEIVHGSYSDYKDALDESSGSKRPFYMPNDNIPANSKAVRAVKG GEADSDDSVDNQSNRVDTLGNDNVVASDETDTFKEIPKKGLNKAEEAEYAKIMDELPKLE HLVKGLDVMISQVATDYEKMQSLMEEREETQTQIDVLTERWMELEERL >gi|292596541|gb|ADCV01000007.1| GENE 271 292283 - 292603 484 106 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1357 NR:ns ## KEGG: Vpar_1357 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 106 1 106 106 154 95.0 9e-37 MATDMVLDFYESINFELIDIDGYDTLFTELLEDGTYATVSDDDGYMPEDLETPVVFNVYD DNDSFQWSVTLDDSYQLKDLLDGAESTDAFLVTLQKLRKEHIEQYQ >gi|292596541|gb|ADCV01000007.1| GENE 272 292647 - 293768 1185 373 aa, chain - ## HITS:1 COG:CAC2897 KEGG:ns NR:ns ## COG: CAC2897 COG0707 # Protein_GI_number: 15896150 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Clostridium acetobutylicum # 1 368 6 380 384 214 31.0 1e-55 MSASIGTGHMQAARAIEEYWKEKEPQASITHVDFLDTETMSVEHLIKGTYIKMIDVFPML YDMIYRVSKGEKRGTIMQTALSYLLKSRMLKLVQQEEPDVMVFTHPFPCGAASILKRQGH IDVPLVAIMTDFSSHQFWLYPQIDVYYVATESMVPEMVASGIDESRIHVSGIPVRRSFFR DAIEEYSLEEPVKVLVMGGGLGLGSLETALKHLDEVNGIGEITVVAGQNTSLYESLVVLS ESMKTKTTVYGYTTNISELMKSSSLLVTKPGALTCMEAVTIGLPMVFFNAIPGQEEANAE LLEQRGCARWARDIHNLEDVVTALLINSPRLQQMSERAREWHVDGAADIVNSLIEILDAS AQDELVKAQEAIS >gi|292596541|gb|ADCV01000007.1| GENE 273 293884 - 294183 544 99 aa, chain - ## HITS:1 COG:BH3356 KEGG:ns NR:ns ## COG: BH3356 COG0776 # Protein_GI_number: 15615918 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus halodurans # 1 89 1 89 90 92 65.0 1e-19 MNKTELIASVAQKTELTKKDAEKAVKAVFDTVAQELAAGGKVQVIGFGTFEVRERAAREG RNPQNGKTITIAASKSPAFKAGKGLKEQVNAAKAKKRKK >gi|292596541|gb|ADCV01000007.1| GENE 274 294235 - 295005 745 256 aa, chain - ## HITS:1 COG:BH0072 KEGG:ns NR:ns ## COG: BH0072 COG3956 # Protein_GI_number: 15612635 # Func_class: R General function prediction only # Function: Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain # Organism: Bacillus halodurans # 6 255 232 487 491 236 49.0 3e-62 MKNNIDIQPLVDVVKTLRAPNGCPWDQKQTHESLRRYFIEETYEVVDAIDNKDMPNLREE LGDVLLQVVFHSQLAEEAGYFTLQDVINDVAEKMIRRHPRVFSPENNEKSYTWDELKAQE KKNIQNSVLDGVSKSLPALMAAYKLQEKAAKLGFDWDELDPVWAKVSEEMGEFKEAIDQN DRENMEKEAGDVLFSLINLFRWYKISGENALNRTNTKFRQRFLHVEACVNQSDRSWEDFS LAELDAFWEEAKVQEK >gi|292596541|gb|ADCV01000007.1| GENE 275 294989 - 296596 1250 535 aa, chain - ## HITS:1 COG:CAC3213 KEGG:ns NR:ns ## COG: CAC3213 COG2244 # Protein_GI_number: 15896460 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Clostridium acetobutylicum # 4 440 6 433 512 213 33.0 7e-55 MNRFLKGAMILTLAGIIVKVIGAFSKVLIARILGGEGIGLYMMAYPIYQIIVSISAAGIP VAISIMIAEKLANDDMRGVQQVFSVSLRVLAILGLVFSLALYGSAQWLVDNHIITDPRAL IAIQLLSPAIFVVTILSCFRGYFQGFQYMVPTGTSQVFEQIFRVSSMVGLAYYFIDRGLH LAAGGATFATFPGVLAGLLVLIYFYYRQRNVREKMLSQQNPNAICESNGTVVKRLFSLAI PVSMANIMLPMVSLIDTFIVPKRLMDIGYYLNEATTQFGYLTGMATSLIGLPIILTTSLA ASLVPAVSEAHTQGDVHRIVKRAETAIKIANMFTIPACIGLCVLATPISQLIYATPHAGP VIAVISLSIVFLGWQQVTAGVLQGLGRTVIPMVSIFIGLLVKTFLDYELTGSVELGINGA AWATNLNFAIAALINYIFVKRYVGSVLNTLELLKIIVSAMAMGGATQVIYVSTVDLLGNG GAVAAAIVVAIFVYGLSLWLTKAVVKDDIYHFPIIGKRLQARRNREEAKLYEEQY >gi|292596541|gb|ADCV01000007.1| GENE 276 296593 - 299889 3179 1098 aa, chain - ## HITS:1 COG:BS_mfd KEGG:ns NR:ns ## COG: BS_mfd COG1197 # Protein_GI_number: 16077123 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Bacillus subtilis # 1 1028 1 1101 1177 820 41.0 0 MDNTLTKLLSQNPSFVDGLNAFQRKGKSVIYGLSGSQKSFLLSQSFSAGLKKPVVIVVHD KDHKEMWERDLAFFWPNVPVQSFPITDHVDFTTVARSLEDQGAQMRALALLAWQEPAVVI ANAEEVTQYVVSPHYLKGQSLHFALNDSIERDVALEQLVTIGYERVDQVEQRGHFAVRGD ILDIYPVNSDHPIRIEFFGDEIDTLRFFSVENQRSIEQIESYTVTPFFLGKSDADSTLLS YVKEGTLIYDEPGRIQEALKKFLKEDPTHRKNHCDWNELQRTVDATNQVAFTFMQQRSIG LTGFNPIGIQGKTMTSFERQIPLLTDEIKQWHRLNHQVVLVLNNQQRREGIERALEGENI AFIHSDTWIAKSNTVVILKGLLTDGFELPNSHLVVVVEGNIYGQQKRKLRNKPKKGQEIN YFTDLTPGDYVVHNMHGIGKYIGLKTIETEGIHRDYIEIAYAGTDKLFLPANNLDQLQKY IGNEGDVPRINKMGGRDWSKVVTKAKKSIDDLADKLVEIYAQREITEGFAFLPDQPWQQE FEDAFPYEETKDQLQATAEIKESMERPVPMDRLLAGDVGFGKTEVAMRAIFKAVMSGKQV AVLVPTTVLAQQHFQTFLNRFAPFGVKVDVLNRFRTTSEKKQILKGVEDGSIDILIGTHS LLNKKVVFKDLGMLVVDEEQRFGVAQKEKWKEWASNIDVLTLSATPIPRTLHMSLVGVRE MSVINTPPEERLPVQTYVVEYDMNLIADAIKRELARGGQVYFVYNRVASINHMGELLESA LPGLRYAIAHGQMTGRQIEEIMTDFYEGHYDVLLSTSIIETGLDIPNANTIIIYDADRLG LSQLYQMRGRVGRSRRRAYAYFMYRPDKILSEAAEKRLKAIEEFTELGAGFKLAMRDLEI RGAGNLLGSQQHGNIASVGFGMYVSMLEEAIAKAQNKEVERDVSIDPAIDLEVDAFIDDA YIKDSARKISVYQRLLHIKSKEQLDDMTDELIDRFGTPTDPVDRLLRIAQIKEQARILGI KSIVRRDKQLTIHWYDDSKMADWDMGAVREDLWKKMKFMDTKPATLYVNLNGMKGSVLTI TEAVIKALSHKSPTKEGL >gi|292596541|gb|ADCV01000007.1| GENE 277 300442 - 300921 496 159 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794148|ref|ZP_06759285.1| ## NR: gi|294794148|ref|ZP_06759285.1| hypothetical protein HMPREF0873_00745 [Veillonella sp. 3_1_44] # 1 159 1 159 159 274 100.0 1e-72 MTKTIRELQLLEAAIVEALSLDEIYDVKFLCKINNELVSCNTLTYFDNTPCIPIPPDAFL GKPNKFEPFFPMDILHAIDPSLSGSSLTIFLANIVNSQDFLLSIFSELDLKSIANMKQLE QLPLTLRNVTFLKNNQTFPFILVDENEPITVLSLSATLK >gi|292596541|gb|ADCV01000007.1| GENE 278 301198 - 301692 276 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794149|ref|ZP_06759286.1| ## NR: gi|294794149|ref|ZP_06759286.1| hypothetical protein HMPREF0873_00746 [Veillonella sp. 3_1_44] # 1 164 1 164 164 322 100.0 3e-87 MKDFFKDHEPGISALLAFIFSGIIWLIQPQEFIPSYLLIIMSAITLLMFYCFMRERYLLT KPIQNPNFKATIHDCSEKGKLVFTVNIQSVLSQGSYFLIAELSNETETIVAWGIIDSVNT KGLYQAKYNMFDQDPHKLTKENLIIRPSLTERSLSLMQNAKFPK >gi|292596541|gb|ADCV01000007.1| GENE 279 301794 - 302201 392 135 aa, chain + ## HITS:1 COG:no KEGG:BMEI1161 NR:ns ## KEGG: BMEI1161 # Name: not_defined # Def: hypothetical protein # Organism: B.melitensis # Pathway: not_defined # 8 103 3 96 124 76 45.0 4e-13 MNITKQIKVIQTLDDNDKVVLNVGSTDGITDNQRFLIYSLGSEFFDPDTNENLGRLEIVK GTGVVIHLQPKMCTVKSDRIDKSINTKVITQESSWTTLSFPGQKITESIPVETQLPFDNP EVGDFAKIIESYPTK >gi|292596541|gb|ADCV01000007.1| GENE 280 302827 - 302892 85 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVNVGHAFIHHHPKKEADPGF >gi|292596541|gb|ADCV01000007.1| GENE 281 303408 - 304523 732 371 aa, chain - ## HITS:1 COG:SMb21204 KEGG:ns NR:ns ## COG: SMb21204 COG0842 # Protein_GI_number: 16264618 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Sinorhizobium meliloti # 5 370 1 369 370 238 35.0 1e-62 MNWRLYWNQIVSIIWKELLATFKDPKTRIILLLPVIIQGFLFGYAATYNLNKVPYVLIDE SHTQTAAALESTINSSGVFELYQSANSPDIIAPLIDSNKVIMAVIIPQDFEENLKHKQPT SITVIVNGTNTMTSGLVAAYMGQIISQFNQTWLGVDHKGITIESRTWYNENQQSSWTFLT GLVILISMTQVIMLGGLSVAREREQGTFDQLLVTPVSSMQILIAKSIPPMIIGLFQSTVL LLIAMFWFKVPFRGNIFLVYAVLFTFISSSIGLGLSISAIAKNMQQVLVYVFVFLFPLAL LSGLITPVHNMPKILQYLTYGNPMRFSVDAMRRIYLEGAGLTDIWFNFIPMIILIIISMS IAGWLFRNRVG >gi|292596541|gb|ADCV01000007.1| GENE 282 304523 - 305635 722 370 aa, chain - ## HITS:1 COG:SMb21205 KEGG:ns NR:ns ## COG: SMb21205 COG0842 # Protein_GI_number: 16264619 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Sinorhizobium meliloti # 3 369 15 383 384 249 39.0 7e-66 MNGFIRRFSSLVYKETLQVLRDPSTILLGVVLPILLIILIGSGVTLDVKHVPIAVVMERQ DSMTQSVYDSLYGSEYFQPIAVRDRKTAELLMEKRKVDAILVIPQDFSDQIMRGQGKVQG IYYGVDTSVAMSIESYVNSAINLWAVKNIPFMLRGGYITMNHRMWFNEANTSTWFLIPGL IMIIMTIVSVFLTAVVMAREWERGTFEALFVTPVKPIEIILAKVVPYYVLAMLGLLFCLG VSYFFYEVPMRGSLWIICIVSTLYLIVSLNMGLLISAFTKKQFLACQMALLTSFLPALIL TGFLFDPHSQPVVIQYISRLLPPTYFLELLKSLFLGGNNWYLIIKNSAVLSGFAICFTIL TIYITRKKVE >gi|292596541|gb|ADCV01000007.1| GENE 283 305632 - 307431 378 599 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 366 562 25 222 318 150 39 7e-35 MNDVYAIEASQLYKEFPLVGDDPIIALDHLDFKIRKGCLTALVGPDGAGKTTLIRLIAGL LDATAGSLEVLGMDVKAHSQAVQDRLSYMPQKFGLYEELSVSENMNLYADLHGIPLHVRT KRFEKLLHMTGLAKFTKRQAGKLSGGMKQKLSLACTLVRSPELLLLDEPTVGVDPFSRRE LWEILESLVCTDGISVLVSTAYLDEAERCKDVFVLNKGRFLATGTPHELTQISEERCFQV KIPKSLSMRNVQAALMDDRKCVADAVPEAGAVRYIKTKEMLSIPWLNEYGMEEEPVQSRL EDTFMMLLKEDEIASKQGAKPLDSIDMDLDESAIEKERKHLLAPNEMVERPVEISVSHLV RTFGDFTAVANTSFTVQRGEVFGLLGPNGAGKTTTFRMLCGLLPVTSGDLRVAGIDVVKS RTAARSNFGYVAQKFSLYGNLSVMENLNFFAGVYGLHGQKKLDRIEAVISEFRLNDVRDM IAGDLPGGYKQRLSMAAALMHEPKILFLDEPTSGIDPLTRRNFWRQITSLSKRGTTIIIT THFMDESEYCDRIMIQDAGKLVVLGTPDEVRRIAGDENCTMDEAFISVILKKREQEDNV >gi|292596541|gb|ADCV01000007.1| GENE 284 307441 - 308481 979 346 aa, chain - ## HITS:1 COG:STM0818 KEGG:ns NR:ns ## COG: STM0818 COG0845 # Protein_GI_number: 16764181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 31 345 20 325 331 171 37.0 2e-42 MKEKLDVLKGWMANNRKKCAGIMIAFLIILGGVSYYAYNQYEAYIASHHIVLQGNVNLRE VNVAFRGSDRIASLLVDEGAVVSQGQILGYLHSDELNLTVQQAKATIAAQDAIVAKLQAG SRPEEIAQASARVTSAEAALAQSKQEAEKLQKSYNASNGKAVSRQSVDDIQAKVKVSEAK LNEAQQAYNLAVAGPRQEDIAQAQAQLDAMKSELARQEFLLNQSVLTSPIDGVITARLLQ VGDMASPNTPVFKLAENTKKWVRVYVNERDLGKIYNGMDANVTTDTNKNEPIHGTIGYIS SVAEFTPKSVETKDVRTTLVYEVRVYVDDPDNRLRLGMPATVSIDI >gi|292596541|gb|ADCV01000007.1| GENE 285 308503 - 310203 496 566 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 127 550 45 457 460 195 29 2e-48 MKTNRKQLLIVYICLALGAWSASAGISFSQSNRDTNQTRRDNTIIQHKSEKTVDDSDQGS PVIASYYKDGKKKKKKSTAADETKLSEKQKATKELNEHSWVEEAGKHPLPYAVVEGNAVS EEELAHWWKVFNDPVLDQLIDLTLKNNRQLEVARSRVRQGRLQLGIAEAQRLPWLDASGS WSANRGQGEWDSDREAIKNLPISDKMTRNVETGKLGIDARWEIDIFGRQKAKSRAASNSL QASQADLYSTWVSLSAETALQYMSLRTLQEQLRITEDDVKRQQEALELIKINNQSGIINE LPVQQATYALSQTQAEIPSLKKNIASTMAALSILTGTVPGEIDGLLMENTSLPTVNPHIF IGIPAEALRQRPDIQAAERRIAAQQQKTKAAKADLKPRFSLNGSIGLESFSSGGLISAIG KMIGIGPSITMPIFNAGAIRKNIKVQTEKEQEYLALYEETVLKAVGEVRNAVTDASQDHI KSEELKSAVESAQQAESLAQTNFDSGLSDYLSVLDAQRNVLSARRQYIMSRGQEFADTVR LFKSLGGGWEAMDMDQEAEADSHAKK >gi|292596541|gb|ADCV01000007.1| GENE 286 310372 - 310650 359 92 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1368 NR:ns ## KEGG: Vpar_1368 # Name: not_defined # Def: helix-turn-helix domain protein # Organism: V.parvula # Pathway: not_defined # 1 92 1 92 92 142 96.0 3e-33 MYIGEIIKSYREQHNMTIEEFANKSNLSQAEITQLEELFQSDGTTPHPVAMRQIKAIAEA IEQPIPIIMNLISADQEIVVNVVAESDQPHAK Prediction of potential genes in microbial genomes Time: Wed Jun 1 05:58:27 2011 Seq name: gi|292596540|gb|ADCV01000008.1| Veillonella sp. 3_1_44 cont1.8, whole genome shotgun sequence Length of sequence - 388604 bp Number of predicted genes - 323, with homology - 297 Number of transcription units - 192, operones - 74 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 159 - 217 100.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. - Term 562 - 630 5.4 1 1 Op 1 . - CDS 773 - 1522 1081 ## Vpar_0054 hypothetical protein - Term 1545 - 1592 0.5 2 1 Op 2 1/0.080 - CDS 1614 - 11903 14238 ## COG5295 Autotransporter adhesin - Prom 11929 - 11988 5.9 - Term 12267 - 12319 11.9 3 2 Tu 1 . - CDS 12423 - 21692 9929 ## COG5295 Autotransporter adhesin - Prom 21716 - 21775 9.0 - Term 22094 - 22134 11.3 4 3 Tu 1 . - CDS 22172 - 28273 7518 ## COG5295 Autotransporter adhesin - Prom 28388 - 28447 7.1 5 4 Op 1 . + CDS 28793 - 28936 60 ## gi|294794162|ref|ZP_06759298.1| hypothetical protein HMPREF0873_00759 6 4 Op 2 . + CDS 28978 - 29244 396 ## Vpar_0050 hypothetical protein + Term 29248 - 29295 8.1 - Term 29291 - 29341 -1.0 7 5 Tu 1 . - CDS 29357 - 30001 888 ## Vpar_0049 hypothetical protein 8 6 Tu 1 . - CDS 30108 - 35606 6910 ## COG5295 Autotransporter adhesin - Prom 35671 - 35730 9.3 - Term 35964 - 35999 6.1 9 7 Op 1 . - CDS 36026 - 36670 815 ## Vpar_0049 hypothetical protein 10 7 Op 2 . - CDS 36758 - 45244 11156 ## COG5295 Autotransporter adhesin - Term 45353 - 45394 3.0 11 8 Op 1 . - CDS 45636 - 45746 139 ## 12 8 Op 2 . - CDS 45756 - 48161 2722 ## COG5295 Autotransporter adhesin - Prom 48361 - 48420 11.0 - Term 48282 - 48338 13.1 13 9 Tu 1 . - CDS 48426 - 49433 1061 ## Vpar_0040 hypothetical protein - Prom 49517 - 49576 8.2 + Prom 49626 - 49685 11.7 14 10 Tu 1 . + CDS 49889 - 51298 1420 ## COG5295 Autotransporter adhesin - Term 51583 - 51627 -0.7 15 11 Tu 1 . - CDS 51629 - 51730 174 ## - Prom 51782 - 51841 5.7 - Term 51849 - 51883 6.0 16 12 Op 1 . - CDS 51892 - 52218 475 ## Vpar_0035 hypothetical protein 17 12 Op 2 . - CDS 52285 - 53361 652 ## Vpar_0034 hypothetical protein - Prom 53524 - 53583 7.0 - Term 53482 - 53518 5.0 18 13 Op 1 . - CDS 53597 - 54652 615 ## COG1088 dTDP-D-glucose 4,6-dehydratase 19 13 Op 2 . - CDS 54658 - 55578 705 ## COG0451 Nucleoside-diphosphate-sugar epimerases 20 13 Op 3 . - CDS 55592 - 57100 283 ## Vpar_0031 hypothetical protein 21 13 Op 4 . - CDS 57110 - 57829 299 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 22 13 Op 5 . - CDS 57846 - 58640 473 ## COG3475 LPS biosynthesis protein 23 13 Op 6 6/0.000 - CDS 58653 - 59654 406 ## COG0726 Predicted xylanase/chitin deacetylase 24 13 Op 7 . - CDS 59651 - 60742 595 ## COG0438 Glycosyltransferase 25 13 Op 8 . - CDS 60753 - 61514 677 ## Vpar_0026 hypothetical protein 26 13 Op 9 . - CDS 61504 - 63114 632 ## Vpar_0025 hypothetical protein - Prom 63144 - 63203 4.9 27 14 Op 1 . - CDS 63263 - 63355 107 ## 28 14 Op 2 . - CDS 63352 - 64452 1208 ## COG0562 UDP-galactopyranose mutase 29 14 Op 3 . - CDS 64452 - 65891 1255 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis - Prom 66011 - 66070 6.1 - Term 66007 - 66052 -0.9 30 15 Tu 1 . - CDS 66141 - 67334 769 ## Vpar_0020 O-antigen polymerase - Prom 67354 - 67413 4.0 31 16 Op 1 . - CDS 67415 - 68353 956 ## COG2990 Uncharacterized protein conserved in bacteria 32 16 Op 2 . - CDS 68395 - 69480 1004 ## COG0438 Glycosyltransferase - Prom 69524 - 69583 2.9 33 17 Tu 1 1/0.080 - CDS 69586 - 71517 1388 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 71558 - 71617 4.8 34 18 Op 1 1/0.080 - CDS 71675 - 72430 549 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 35 18 Op 2 . - CDS 72488 - 74518 1627 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 74599 - 74658 3.7 - Term 74663 - 74703 0.2 36 19 Op 1 . - CDS 74710 - 74823 60 ## 37 19 Op 2 . - CDS 74856 - 76034 1592 ## Vpar_0014 hypothetical protein - Term 76213 - 76257 5.3 38 20 Tu 1 . - CDS 76373 - 76972 689 ## Vpar_0013 hypothetical protein - Prom 77035 - 77094 7.2 + Prom 77038 - 77097 6.2 39 21 Tu 1 . + CDS 77228 - 78583 1976 ## COG1253 Hemolysins and related proteins containing CBS domains + Prom 78856 - 78915 10.7 40 22 Op 1 27/0.000 + CDS 79012 - 80076 1439 ## COG0845 Membrane-fusion protein 41 22 Op 2 . + CDS 80073 - 83135 3044 ## COG0841 Cation/multidrug efflux pump + Term 83245 - 83303 3.1 - Term 83231 - 83290 7.1 42 23 Tu 1 . - CDS 83307 - 83624 479 ## COG0393 Uncharacterized conserved protein - Prom 83658 - 83717 9.2 - Term 83777 - 83820 8.5 43 24 Op 1 . - CDS 83831 - 85312 1918 ## COG0833 Amino acid transporters 44 24 Op 2 . - CDS 85323 - 87224 2498 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 45 24 Op 3 . - CDS 87302 - 87550 181 ## Vpar_0006 hypothetical protein 46 24 Op 4 . - CDS 87564 - 88466 671 ## Vpar_0005 protein of unknown function DUF721 47 24 Op 5 . - CDS 88453 - 89553 759 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 48 24 Op 6 . - CDS 89557 - 89790 370 ## Vpar_0003 RNA-binding S4 domain protein - Prom 89959 - 90018 2.0 - Term 89865 - 89914 2.0 49 25 Tu 1 . - CDS 90044 - 91156 1296 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) - Prom 91258 - 91317 9.2 50 26 Tu 1 . - CDS 91565 - 93139 1558 ## COG0593 ATPase involved in DNA replication initiation - Prom 93243 - 93302 8.0 + Prom 94238 - 94297 6.0 51 27 Op 1 . + CDS 94342 - 94476 230 ## PROTEIN SUPPORTED gi|227371631|ref|ZP_03855114.1| LSU ribosomal protein L34P + Term 94498 - 94540 6.2 52 27 Op 2 22/0.000 + CDS 94556 - 94915 342 ## COG0594 RNase P protein component + Term 94916 - 94952 1.1 53 27 Op 3 16/0.000 + CDS 95354 - 96019 838 ## COG0706 Preprotein translocase subunit YidC 54 27 Op 4 4/0.000 + CDS 96029 - 96826 1136 ## COG1847 Predicted RNA-binding protein + Term 96835 - 96894 10.4 + Prom 96874 - 96933 4.6 55 28 Op 1 11/0.000 + CDS 97016 - 98401 1447 ## COG0486 Predicted GTPase 56 28 Op 2 24/0.000 + CDS 98452 - 100323 2106 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division + Term 100329 - 100374 1.5 + Prom 100356 - 100415 3.6 57 28 Op 3 . + CDS 100443 - 101195 602 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division + Term 101258 - 101310 15.3 - Term 101247 - 101297 17.1 58 29 Op 1 1/0.080 - CDS 101495 - 102352 1167 ## COG0685 5,10-methylenetetrahydrofolate reductase 59 29 Op 2 . - CDS 102374 - 104809 3007 ## COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain 60 29 Op 3 . - CDS 104857 - 105624 977 ## Vpar_1849 vitamin B12 dependent methionine synthase activation region - Prom 105657 - 105716 5.4 + Prom 106429 - 106488 4.9 61 30 Op 1 25/0.000 + CDS 106553 - 107323 870 ## COG1192 ATPases involved in chromosome partitioning + Term 107417 - 107454 -0.9 + Prom 107415 - 107474 4.7 62 30 Op 2 . + CDS 107503 - 108432 1010 ## COG1475 Predicted transcriptional regulators 63 30 Op 3 . + CDS 108433 - 108696 225 ## PROTEIN SUPPORTED gi|167033380|ref|YP_001668611.1| putative ribosomal protein S1 + Term 108699 - 108730 0.0 + Prom 108740 - 108799 8.9 64 31 Tu 1 . + CDS 108835 - 110121 1167 ## COG1160 Predicted GTPases + Prom 110244 - 110303 7.3 65 32 Op 1 . + CDS 110338 - 110859 663 ## Vpar_1845 hypothetical protein 66 32 Op 2 . + CDS 110869 - 111825 1116 ## COG0739 Membrane proteins related to metalloendopeptidases + Term 111894 - 111953 6.2 + Prom 111919 - 111978 13.7 67 33 Op 1 . + CDS 111998 - 112576 811 ## COG2109 ATP:corrinoid adenosyltransferase 68 33 Op 2 . + CDS 112606 - 113745 976 ## Vpar_1842 hypothetical protein 69 33 Op 3 . + CDS 113823 - 114200 338 ## COG3874 Uncharacterized conserved protein + Prom 114327 - 114386 4.6 70 34 Tu 1 . + CDS 114481 - 114939 756 ## Vpar_1840 outer membrane chaperone Skp (OmpH) + Term 114951 - 114991 5.5 + Prom 114960 - 115019 5.3 71 35 Tu 1 . + CDS 115048 - 115569 497 ## COG0778 Nitroreductase + Term 115693 - 115741 3.2 - Term 115687 - 115723 4.1 72 36 Tu 1 . - CDS 115733 - 116020 516 ## Vpar_1838 hypothetical protein - Prom 116248 - 116307 10.5 - Term 116270 - 116315 7.5 73 37 Op 1 . - CDS 116366 - 117031 947 ## Vpar_1837 hypothetical protein 74 37 Op 2 . - CDS 117033 - 117989 1306 ## COG1251 NAD(P)H-nitrite reductase - Prom 118057 - 118116 14.1 + Prom 118295 - 118354 6.6 75 38 Tu 1 . + CDS 118382 - 119647 1032 ## COG1489 DNA-binding protein, stimulates sugar fermentation + Prom 119787 - 119846 3.7 76 39 Tu 1 . + CDS 119870 - 120676 608 ## Vpar_1834 hypothetical protein + Prom 120733 - 120792 7.5 77 40 Op 1 . + CDS 120830 - 123298 3200 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 78 40 Op 2 . + CDS 123378 - 123749 451 ## Vpar_1832 hypothetical protein + Term 123799 - 123869 11.4 + Prom 124047 - 124106 8.4 79 41 Op 1 . + CDS 124152 - 125195 449 ## COG3177 Uncharacterized conserved protein + Term 125237 - 125274 0.2 + Prom 125250 - 125309 7.0 80 41 Op 2 . + CDS 125364 - 125738 559 ## Vpar_1831 hypothetical protein + Term 125815 - 125851 8.2 + Prom 125937 - 125996 10.1 81 42 Tu 1 . + CDS 126175 - 127605 1745 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 82 43 Tu 1 . + CDS 128306 - 129244 810 ## COG1472 Beta-glucosidase-related glycosidases + Term 129372 - 129414 8.5 + Prom 129409 - 129468 10.7 83 44 Tu 1 . + CDS 129716 - 130780 863 ## COG1672 Predicted ATPase (AAA+ superfamily) + Term 130853 - 130908 14.5 + Prom 130836 - 130895 3.9 84 45 Tu 1 . + CDS 131074 - 131940 563 ## Vpar_1827 RNA polymerase, sigma-24 subunit, ECF subfamily 85 46 Tu 1 . + CDS 132260 - 132868 175 ## Vpar_1826 hypothetical protein + Term 132999 - 133040 8.1 + Prom 133815 - 133874 4.9 86 47 Tu 1 . + CDS 133913 - 135754 1444 ## COG1479 Uncharacterized conserved protein + Term 135782 - 135844 8.2 + Prom 136166 - 136225 4.5 87 48 Tu 1 . + CDS 136280 - 137050 353 ## COG5551 Uncharacterized conserved protein + Prom 137126 - 137185 8.2 88 49 Tu 1 . + CDS 137221 - 137397 160 ## gi|294792436|ref|ZP_06757583.1| hypothetical protein HMPREF0874_00884 + Term 137582 - 137623 -0.5 + Prom 138368 - 138427 6.8 89 50 Tu 1 . + CDS 138631 - 138699 156 ## + Term 138938 - 138992 12.2 - Term 138979 - 139019 1.4 90 51 Tu 1 . - CDS 139045 - 141414 1951 ## Vpar_1824 hypothetical protein - Prom 141474 - 141533 7.1 + Prom 141458 - 141517 5.3 91 52 Tu 1 . + CDS 141583 - 143727 1191 ## Vpar_1823 hypothetical protein + Term 143739 - 143787 9.4 - Term 143730 - 143770 5.1 92 53 Tu 1 . - CDS 143788 - 145806 1162 ## Vpar_1822 hypothetical protein - Prom 145848 - 145907 6.1 + Prom 145594 - 145653 7.0 93 54 Tu 1 . + CDS 145798 - 145875 60 ## + Prom 146764 - 146823 1.9 94 55 Tu 1 . + CDS 146901 - 147119 56 ## 95 56 Tu 1 . + CDS 147672 - 147779 291 ## + Prom 147810 - 147869 9.7 96 57 Tu 1 . + CDS 147987 - 148067 127 ## + Term 148179 - 148223 7.1 + Prom 148317 - 148376 7.6 97 58 Tu 1 . + CDS 148412 - 148597 175 ## gi|294792436|ref|ZP_06757583.1| hypothetical protein HMPREF0874_00884 + Term 148633 - 148663 1.1 + Prom 149642 - 149701 6.3 98 59 Op 1 . + CDS 149745 - 149807 68 ## 99 59 Op 2 . + CDS 149818 - 150216 376 ## Vpar_1821 protein of unknown function DUF805 + Term 150241 - 150277 -0.6 + Prom 150230 - 150289 2.6 100 60 Op 1 . + CDS 150331 - 150606 286 ## Vpar_1820 CRISPR-associated protein Cas2 101 60 Op 2 . + CDS 150624 - 151619 743 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair + Term 151620 - 151677 -0.3 + Prom 151704 - 151763 9.3 102 61 Op 1 . + CDS 151812 - 152177 337 ## Vpar_1818 CRISPR-associated protein, putative 103 61 Op 2 . + CDS 152208 - 153809 1491 ## Vpar_1817 hypothetical protein 104 61 Op 3 . + CDS 153812 - 154459 777 ## Vpar_1816 protein of unknown function DUF324 105 61 Op 4 . + CDS 154447 - 156027 1636 ## Vpar_1815 hypothetical protein 106 61 Op 5 . + CDS 156041 - 157375 1517 ## Vpar_1814 protein of unknown function DUF324 107 61 Op 6 . + CDS 157368 - 157931 579 ## Vpar_1813 hypothetical protein 108 61 Op 7 . + CDS 157933 - 159924 1756 ## Vpar_1812 protein of unknown function DUF324 109 61 Op 8 . + CDS 159924 - 160727 672 ## Vpar_1811 hypothetical protein + Term 160781 - 160849 23.8 + Prom 160903 - 160962 6.7 110 62 Op 1 . + CDS 161064 - 161738 421 ## Vpar_1810 amidophosphoribosyltransferase 111 62 Op 2 . + CDS 161740 - 162687 753 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 112 62 Op 3 . + CDS 162714 - 163250 342 ## Vpar_1808 hypothetical protein + Term 163273 - 163325 -0.0 + Prom 163271 - 163330 3.8 113 63 Tu 1 . + CDS 163367 - 165622 1238 ## Vpar_1807 hypothetical protein + Term 165746 - 165798 10.4 + Prom 165851 - 165910 7.9 114 64 Tu 1 . + CDS 166030 - 166176 81 ## + Term 166285 - 166318 -0.8 - Term 166870 - 166896 -1.0 115 65 Tu 1 . - CDS 166953 - 167021 71 ## - Prom 167066 - 167125 6.4 + Prom 167741 - 167800 6.2 116 66 Op 1 . + CDS 167940 - 168935 936 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 117 66 Op 2 . + CDS 168937 - 169212 240 ## TherJR_2014 CRISPR-associated protein Cas2 + Term 169283 - 169336 0.2 + Prom 169605 - 169664 3.0 118 67 Tu 1 . + CDS 169705 - 169770 58 ## + Prom 170579 - 170638 6.9 119 68 Tu 1 . + CDS 170706 - 172049 1860 ## COG0015 Adenylosuccinate lyase + Term 172069 - 172113 5.2 + Prom 172113 - 172172 4.9 120 69 Tu 1 . + CDS 172227 - 172328 99 ## + Term 172513 - 172566 4.0 - Term 172508 - 172545 0.1 121 70 Tu 1 . - CDS 172618 - 174036 1766 ## COG0591 Na+/proline symporter - Prom 174192 - 174251 9.5 + Prom 174094 - 174153 5.9 122 71 Op 1 . + CDS 174310 - 174882 603 ## gi|294792460|ref|ZP_06757607.1| hypothetical protein HMPREF0874_00910 123 71 Op 2 . + CDS 174945 - 175460 408 ## gi|294792461|ref|ZP_06757608.1| hypothetical protein HMPREF0874_00911 124 71 Op 3 . + CDS 175466 - 175906 141 ## gi|282849527|ref|ZP_06258911.1| hypothetical protein HMPREF1035_0540 + Term 175997 - 176050 9.6 + Prom 176012 - 176071 5.2 125 72 Tu 1 . + CDS 176163 - 176264 157 ## + Term 176469 - 176532 8.1 + Prom 176407 - 176466 8.4 126 73 Op 1 . + CDS 176557 - 177777 1277 ## Vpar_1796 hypothetical protein 127 73 Op 2 . + CDS 177813 - 178388 417 ## Vpar_1791 hypothetical protein + Term 178410 - 178470 5.1 + Prom 178427 - 178486 7.5 128 74 Op 1 . + CDS 178580 - 178681 87 ## + Prom 178738 - 178797 2.8 129 74 Op 2 . + CDS 178838 - 179374 746 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 179547 - 179592 1.7 + Prom 179809 - 179868 6.9 130 75 Op 1 . + CDS 180083 - 180526 452 ## Vpar_1789 hypothetical protein 131 75 Op 2 . + CDS 180526 - 181125 391 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) + Term 181338 - 181378 6.6 132 76 Tu 1 . - CDS 181146 - 181307 117 ## Vpar_1787 hypothetical protein - Prom 181463 - 181522 6.7 + Prom 181477 - 181536 6.5 133 77 Tu 1 . + CDS 181576 - 182292 820 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 182498 - 182537 0.4 + Prom 182532 - 182591 7.8 134 78 Op 1 6/0.000 + CDS 182649 - 182933 274 ## COG3549 Plasmid maintenance system killer protein 135 78 Op 2 . + CDS 182950 - 183270 427 ## COG3093 Plasmid maintenance system antidote protein + Prom 183278 - 183337 5.2 136 78 Op 3 . + CDS 183357 - 183710 482 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Prom 184116 - 184175 9.4 137 79 Tu 1 . + CDS 184299 - 185072 980 ## Vpar_1782 hypothetical protein + Term 185082 - 185126 10.0 - Term 185070 - 185114 10.0 138 80 Tu 1 . - CDS 185194 - 186516 1572 ## COG2271 Sugar phosphate permease - Prom 186587 - 186646 7.3 + Prom 186549 - 186608 11.2 139 81 Op 1 2/0.000 + CDS 186836 - 187087 296 ## COG2217 Cation transport ATPase 140 81 Op 2 . + CDS 187032 - 187643 774 ## COG2217 Cation transport ATPase + Term 187733 - 187796 10.1 - Term 187721 - 187783 12.4 141 82 Tu 1 . - CDS 187828 - 188418 809 ## COG0778 Nitroreductase - Prom 188631 - 188690 5.2 + Prom 188573 - 188632 9.8 142 83 Op 1 . + CDS 188799 - 189317 689 ## COG1846 Transcriptional regulators + Term 189411 - 189447 0.0 + Prom 189338 - 189397 6.1 143 83 Op 2 . + CDS 189472 - 189870 473 ## Vpar_1777 hypothetical protein + Term 189906 - 189952 11.0 + Prom 189878 - 189937 2.5 144 84 Op 1 . + CDS 189960 - 190730 1013 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 145 84 Op 2 . + CDS 190740 - 191366 589 ## COG1994 Zn-dependent proteases + Term 191386 - 191426 9.4 + Prom 191438 - 191497 15.2 146 85 Op 1 . + CDS 191709 - 191942 380 ## Vpar_1774 BFD domain protein (2Fe-2S)-binding domain protein + Prom 192125 - 192184 8.2 147 85 Op 2 . + CDS 192227 - 193372 1473 ## COG1472 Beta-glucosidase-related glycosidases + Term 193430 - 193487 13.4 + Prom 193434 - 193493 6.6 148 86 Tu 1 . + CDS 193515 - 194666 1557 ## COG1454 Alcohol dehydrogenase, class IV + Term 194700 - 194737 -0.6 + Prom 194833 - 194892 6.2 149 87 Op 1 . + CDS 194965 - 196509 1086 ## COG0038 Chloride channel protein EriC 150 87 Op 2 . + CDS 196522 - 196971 275 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 151 87 Op 3 . + CDS 196997 - 197791 817 ## COG0730 Predicted permeases + Term 197831 - 197897 8.1 + Prom 197795 - 197854 5.5 152 88 Tu 1 . + CDS 197937 - 198017 61 ## + Prom 198195 - 198254 5.2 153 89 Tu 1 . + CDS 198290 - 201112 560 ## PROTEIN SUPPORTED gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative + Term 201183 - 201233 2.3 - Term 201346 - 201394 10.2 154 90 Tu 1 . - CDS 201396 - 201503 67 ## - Prom 201527 - 201586 8.9 + Prom 201350 - 201409 5.8 155 91 Op 1 . + CDS 201589 - 202236 615 ## COG0457 FOG: TPR repeat 156 91 Op 2 . + CDS 202239 - 202652 201 ## gi|238018314|ref|ZP_04598740.1| hypothetical protein VEIDISOL_00138 157 92 Op 1 . - CDS 202662 - 203039 374 ## COG1598 Uncharacterized conserved protein 158 92 Op 2 . - CDS 203049 - 203225 249 ## gi|294794290|ref|ZP_06759426.1| toxin-antitoxin system, toxin component, HicA family - Prom 203379 - 203438 10.1 + Prom 203372 - 203431 7.3 159 93 Tu 1 . + CDS 203473 - 204372 945 ## Vpar_1765 hypothetical protein + Term 204407 - 204451 11.0 - Term 204395 - 204439 11.0 160 94 Tu 1 . - CDS 204466 - 205362 582 ## COG2962 Predicted permeases - Prom 205382 - 205441 5.1 + Prom 205747 - 205806 4.7 161 95 Op 1 7/0.000 + CDS 205997 - 208159 3360 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 162 95 Op 2 6/0.000 + CDS 208164 - 210353 2938 ## COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit 163 95 Op 3 . + CDS 210346 - 211599 1228 ## COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family + Term 211833 - 211887 -0.1 + Prom 211858 - 211917 11.4 164 96 Op 1 . + CDS 211960 - 212217 333 ## Vpar_1759 hypothetical protein 165 96 Op 2 . + CDS 212251 - 212493 88 ## Vpar_1758 hypothetical protein 166 96 Op 3 30/0.000 + CDS 212498 - 213124 664 ## COG0811 Biopolymer transport proteins 167 96 Op 4 . + CDS 213121 - 213525 390 ## COG0848 Biopolymer transport protein 168 96 Op 5 . + CDS 213530 - 214360 976 ## Vpar_1755 hypothetical protein + Term 214362 - 214411 7.1 - Term 214350 - 214399 1.4 169 97 Tu 1 . - CDS 214515 - 214925 481 ## Vpar_1754 hypothetical protein - Prom 214952 - 215011 4.2 + Prom 214997 - 215056 4.6 170 98 Tu 1 . + CDS 215106 - 216053 872 ## Acfer_0716 peptidase M48 Ste24p + Term 216121 - 216153 4.0 + Prom 216055 - 216114 6.5 171 99 Op 1 2/0.000 + CDS 216200 - 217495 1843 ## COG0015 Adenylosuccinate lyase + Term 217533 - 217602 13.2 + Prom 217584 - 217643 6.2 172 99 Op 2 . + CDS 217726 - 218901 1247 ## COG0477 Permeases of the major facilitator superfamily + Prom 219000 - 219059 7.7 173 100 Tu 1 . + CDS 219093 - 220376 1723 ## COG0104 Adenylosuccinate synthase + Term 220486 - 220516 4.3 + Prom 220628 - 220687 9.3 174 101 Op 1 . + CDS 220916 - 221260 334 ## COG0640 Predicted transcriptional regulators 175 101 Op 2 . + CDS 221263 - 222795 1182 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 176 101 Op 3 . + CDS 222884 - 223168 426 ## Vpar_1746 hypothetical protein + Term 223176 - 223232 0.7 + Prom 223373 - 223432 7.1 177 102 Tu 1 . + CDS 223484 - 224947 1896 ## COG0753 Catalase + Prom 225007 - 225066 8.7 178 103 Tu 1 . + CDS 225307 - 226299 961 ## COG2503 Predicted secreted acid phosphatase + Term 226471 - 226508 5.1 + TRNA 226348 - 226424 82.6 # Arg CCT 0 0 179 104 Op 1 . + CDS 226687 - 227517 599 ## Vpar_1739 hypothetical protein 180 104 Op 2 . + CDS 227569 - 228384 690 ## COG4296 Uncharacterized protein conserved in bacteria 181 104 Op 3 . + CDS 228405 - 228836 430 ## gi|294794312|ref|ZP_06759448.1| conserved hypothetical protein 182 104 Op 4 . + CDS 228908 - 229414 448 ## gi|294794313|ref|ZP_06759449.1| hypothetical protein HMPREF0873_00912 183 104 Op 5 . + CDS 229452 - 229994 557 ## CLL_A2815 hypothetical protein 184 104 Op 6 . + CDS 230067 - 230873 388 ## TDE0536 hypothetical protein 185 104 Op 7 . + CDS 230932 - 231525 553 ## Vpar_1736 hypothetical protein 186 104 Op 8 . + CDS 231610 - 232116 485 ## Vpar_1735 hypothetical protein 187 104 Op 9 . + CDS 232140 - 232427 332 ## Vpar_1734 hypothetical protein 188 105 Tu 1 . - CDS 232564 - 233130 538 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 233218 - 233277 7.0 + Prom 233258 - 233317 4.1 189 106 Tu 1 . + CDS 233366 - 233863 676 ## COG4720 Predicted membrane protein + Term 233923 - 233972 13.4 + Prom 234001 - 234060 7.6 190 107 Tu 1 . + CDS 234102 - 234488 210 ## gi|294794321|ref|ZP_06759457.1| putative N-succinylarginine dihydrolase 191 108 Tu 1 . - CDS 234584 - 234655 193 ## - Prom 234783 - 234842 9.5 + Prom 234771 - 234830 8.8 192 109 Tu 1 . + CDS 234942 - 235043 82 ## + Term 235132 - 235179 2.7 - Term 235029 - 235081 11.0 193 110 Tu 1 . - CDS 235268 - 235645 438 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit - Prom 235676 - 235735 5.8 + Prom 235621 - 235680 3.7 194 111 Op 1 . + CDS 235712 - 236074 301 ## COG0789 Predicted transcriptional regulators + Prom 236116 - 236175 3.9 195 111 Op 2 . + CDS 236201 - 236545 523 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism + Term 236551 - 236597 10.4 + Prom 236557 - 236616 4.8 196 112 Op 1 . + CDS 236646 - 237041 533 ## Vpar_1725 hypothetical protein 197 112 Op 2 . + CDS 237052 - 237564 591 ## COG1267 Phosphatidylglycerophosphatase A and related proteins + Prom 237672 - 237731 6.6 198 113 Tu 1 . + CDS 237779 - 238318 434 ## COG1335 Amidases related to nicotinamidase + Term 238387 - 238431 6.0 199 114 Tu 1 . + CDS 238678 - 239307 673 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 239445 - 239479 0.3 + Prom 239454 - 239513 6.7 200 115 Tu 1 . + CDS 239736 - 241379 2140 ## COG2461 Uncharacterized conserved protein + Term 241621 - 241673 11.3 - Term 241609 - 241661 15.1 201 116 Tu 1 . - CDS 241715 - 242902 609 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 242973 - 243032 7.0 + Prom 243297 - 243356 9.4 202 117 Tu 1 . + CDS 243522 - 244874 1814 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 244892 - 244938 8.4 + Prom 245071 - 245130 10.9 203 118 Tu 1 . + CDS 245344 - 245619 311 ## Vpar_1718 transcriptional regulator, XRE family 204 119 Tu 1 . - CDS 245597 - 246274 767 ## Vpar_1717 protein of unknown function DUF1121 - Prom 246338 - 246397 7.1 + Prom 246104 - 246163 2.4 205 120 Tu 1 . + CDS 246207 - 246395 116 ## + Prom 246566 - 246625 8.0 206 121 Tu 1 . + CDS 246665 - 247663 1699 ## COG0280 Phosphotransacetylase + Term 247717 - 247756 7.5 + Prom 247727 - 247786 7.5 207 122 Tu 1 . + CDS 247927 - 248586 656 ## COG2846 Regulator of cell morphogenesis and NO signaling + Term 248611 - 248650 2.3 + Prom 248748 - 248807 5.9 208 123 Op 1 . + CDS 248863 - 249666 854 ## Vpar_1714 hypothetical protein 209 123 Op 2 . + CDS 249685 - 250227 656 ## COG0386 Glutathione peroxidase + Term 250254 - 250294 9.1 - Term 250237 - 250288 13.5 210 124 Tu 1 . - CDS 250411 - 251205 724 ## COG3384 Uncharacterized conserved protein - Prom 251367 - 251426 8.8 + Prom 251460 - 251519 8.1 211 125 Tu 1 . + CDS 251646 - 252002 519 ## COG1733 Predicted transcriptional regulators + Prom 252155 - 252214 7.5 212 126 Tu 1 . + CDS 252258 - 252959 641 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 253070 - 253112 5.2 + Prom 253055 - 253114 6.5 213 127 Op 1 1/0.080 + CDS 253157 - 254290 1017 ## COG2733 Predicted membrane protein 214 127 Op 2 . + CDS 254287 - 255600 1333 ## COG2733 Predicted membrane protein + Term 255637 - 255697 11.3 - Term 255726 - 255761 7.4 215 128 Op 1 40/0.000 - CDS 255769 - 257184 1395 ## COG0642 Signal transduction histidine kinase 216 128 Op 2 . - CDS 257162 - 257836 938 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 257955 - 258014 7.9 + Prom 258523 - 258582 6.6 217 129 Op 1 36/0.000 + CDS 258721 - 260439 2419 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 218 129 Op 2 2/0.000 + CDS 260441 - 261403 1118 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 219 129 Op 3 . + CDS 261403 - 262278 1079 ## COG2048 Heterodisulfide reductase, subunit B + Term 262352 - 262398 13.2 + Prom 262504 - 262563 10.9 220 130 Tu 1 . + CDS 262701 - 263486 226 ## PROTEIN SUPPORTED gi|148826972|ref|YP_001291725.1| 30S ribosomal protein S15 + Term 263526 - 263594 18.3 + Prom 263506 - 263565 2.8 221 131 Tu 1 . + CDS 263712 - 263918 382 ## Vpar_1701 hypothetical protein + Prom 264015 - 264074 5.5 222 132 Tu 1 . + CDS 264140 - 264361 411 ## Vpar_1700 hypothetical protein + Term 264420 - 264456 3.0 + Prom 264453 - 264512 7.5 223 133 Op 1 30/0.000 + CDS 264675 - 265286 801 ## COG0811 Biopolymer transport proteins 224 133 Op 2 . + CDS 265325 - 265687 421 ## COG0848 Biopolymer transport protein 225 133 Op 3 . + CDS 265696 - 266499 944 ## Vpar_1697 TonB family protein + Term 266501 - 266560 11.5 + Prom 266537 - 266596 8.8 226 134 Tu 1 . + CDS 266666 - 268729 1732 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 268740 - 268812 4.2 + Prom 268766 - 268825 4.6 227 135 Op 1 33/0.000 + CDS 268886 - 269836 534 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 228 135 Op 2 35/0.000 + CDS 269820 - 270821 1148 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 229 135 Op 3 . + CDS 270818 - 271606 216 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 271713 - 271758 11.1 + Prom 271706 - 271765 4.3 230 136 Op 1 . + CDS 271852 - 272445 346 ## PROTEIN SUPPORTED gi|154175107|ref|YP_001408238.1| ribosomal protein L22 231 136 Op 2 . + CDS 272456 - 274087 1422 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family + Term 274117 - 274152 -0.2 + Prom 274307 - 274366 12.1 232 137 Op 1 21/0.000 + CDS 274526 - 275479 1002 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 233 137 Op 2 24/0.000 + CDS 275490 - 276242 738 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 234 137 Op 3 . + CDS 276254 - 277027 855 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component + Prom 277045 - 277104 8.5 235 138 Tu 1 . + CDS 277294 - 278091 567 ## Vpar_1687 hypothetical protein + Term 278176 - 278220 -0.8 + Prom 278167 - 278226 5.7 236 139 Tu 1 . + CDS 278357 - 278428 85 ## + Prom 278515 - 278574 4.4 237 140 Tu 1 . + CDS 278636 - 280804 2700 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 280817 - 280865 6.7 238 141 Op 1 . + CDS 281220 - 281957 876 ## Vpar_1684 hypothetical protein 239 141 Op 2 9/0.000 + CDS 281974 - 283995 657 ## PROTEIN SUPPORTED gi|194246575|ref|YP_002004214.1| 50S ribosomal protein L9 240 141 Op 3 16/0.000 + CDS 283998 - 284444 721 ## PROTEIN SUPPORTED gi|227371820|ref|ZP_03855303.1| LSU ribosomal protein L9P + Term 284450 - 284489 8.1 241 141 Op 4 . + CDS 284514 - 285872 2034 ## COG0305 Replicative DNA helicase + Term 285878 - 285935 -0.0 + Prom 286003 - 286062 8.7 242 142 Op 1 . + CDS 286126 - 287409 786 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 243 142 Op 2 . + CDS 287466 - 287792 290 ## Vpar_1678 hypothetical protein + Prom 287815 - 287874 4.5 244 143 Op 1 . + CDS 287966 - 289498 1252 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) + Prom 289583 - 289642 8.4 245 143 Op 2 . + CDS 289754 - 291883 2861 ## COG2217 Cation transport ATPase + Term 291966 - 292014 12.7 - Term 291953 - 292002 9.1 246 144 Tu 1 . - CDS 292120 - 292209 88 ## - Prom 292235 - 292294 7.3 + Prom 292234 - 292293 5.8 247 145 Op 1 . + CDS 292329 - 293282 770 ## COG0598 Mg2+ and Co2+ transporters 248 145 Op 2 . + CDS 293322 - 293423 73 ## + Term 293549 - 293586 7.8 + TRNA 293451 - 293539 76.3 # Ser TGA 0 0 + Prom 293464 - 293523 80.4 249 146 Op 1 . + CDS 293644 - 294870 1573 ## COG0477 Permeases of the major facilitator superfamily + Prom 294923 - 294982 5.5 250 146 Op 2 . + CDS 295024 - 295572 631 ## COG2755 Lysophospholipase L1 and related esterases + Term 295633 - 295674 10.4 - Term 295619 - 295662 7.0 251 147 Tu 1 . - CDS 295735 - 296727 1459 ## Vpar_1672 hypothetical protein - Prom 296825 - 296884 12.4 + Prom 296770 - 296829 12.9 252 148 Op 1 8/0.000 + CDS 297079 - 300573 3869 ## COG3857 ATP-dependent nuclease, subunit B 253 148 Op 2 . + CDS 300563 - 304318 4076 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) + Term 304354 - 304390 3.4 - Term 304328 - 304391 17.1 254 149 Tu 1 . - CDS 304400 - 305341 862 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 305482 - 305541 6.0 + Prom 305370 - 305429 9.8 255 150 Tu 1 . + CDS 305550 - 306257 915 ## COG1802 Transcriptional regulators + Term 306299 - 306346 5.1 - Term 306283 - 306332 6.5 256 151 Tu 1 . - CDS 306444 - 306827 390 ## Vpar_1667 transcriptional regulator, XRE family - Prom 306969 - 307028 4.6 + Prom 306817 - 306876 5.0 257 152 Op 1 1/0.080 + CDS 307017 - 307397 380 ## COG0239 Integral membrane protein possibly involved in chromosome condensation + Term 307407 - 307462 0.5 + Prom 307399 - 307458 1.8 258 152 Op 2 . + CDS 307482 - 308462 1218 ## COG0303 Molybdopterin biosynthesis enzyme + Term 308581 - 308639 18.1 + Prom 308633 - 308692 11.6 259 153 Tu 1 . + CDS 308883 - 311381 2871 ## COG5295 Autotransporter adhesin + Term 311460 - 311494 5.2 - Term 311441 - 311489 14.1 260 154 Op 1 . - CDS 311516 - 311746 379 ## Vpar_1663 hypothetical protein 261 154 Op 2 . - CDS 311756 - 312601 744 ## COG1768 Predicted phosphohydrolase 262 154 Op 3 . - CDS 312678 - 313451 733 ## COG1085 Galactose-1-phosphate uridylyltransferase - Prom 313523 - 313582 6.9 + Prom 313483 - 313542 5.4 263 155 Tu 1 . + CDS 313569 - 314090 666 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Prom 314137 - 314196 3.6 264 156 Op 1 . + CDS 314217 - 315314 1031 ## COG1194 A/G-specific DNA glycosylase 265 156 Op 2 . + CDS 315331 - 316512 1123 ## COG1408 Predicted phosphohydrolases + Term 316523 - 316560 9.4 - Term 316511 - 316548 9.4 266 157 Tu 1 . - CDS 316612 - 317967 1419 ## COG0114 Fumarase - Prom 317992 - 318051 1.6 + Prom 318125 - 318184 7.6 267 158 Op 1 . + CDS 318416 - 320494 2761 ## COG1297 Predicted membrane protein 268 158 Op 2 . + CDS 320506 - 321351 1171 ## Vpar_1655 hypothetical protein + Term 321403 - 321448 12.1 - Term 321396 - 321431 3.1 269 159 Tu 1 . - CDS 321445 - 322815 1504 ## Vpar_1654 S-layer domain protein - Prom 322872 - 322931 4.9 - Term 322929 - 322977 11.5 270 160 Tu 1 . - CDS 322999 - 324747 2361 ## Vpar_1653 S-layer domain protein - Prom 324779 - 324838 7.5 + Prom 325066 - 325125 8.7 271 161 Op 1 17/0.000 + CDS 325271 - 326008 996 ## COG0247 Fe-S oxidoreductase 272 161 Op 2 13/0.000 + CDS 326021 - 327466 1881 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 273 161 Op 3 . + CDS 327466 - 328194 1021 ## COG1556 Uncharacterized conserved protein + Term 328217 - 328253 6.6 + Prom 328247 - 328306 7.3 274 162 Tu 1 . + CDS 328371 - 329762 1808 ## COG1823 Predicted Na+/dicarboxylate symporter + Term 329794 - 329862 22.1 + Prom 329904 - 329963 5.0 275 163 Tu 1 . + CDS 330013 - 331566 1804 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) + Prom 332163 - 332222 8.9 276 164 Tu 1 . + CDS 332248 - 333063 811 ## COG0778 Nitroreductase + Term 333068 - 333116 16.1 - Term 333048 - 333109 21.0 277 165 Tu 1 . - CDS 333136 - 333954 1085 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Prom 334117 - 334176 8.4 278 166 Tu 1 . + CDS 334216 - 335382 1552 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family + Prom 335393 - 335452 10.3 279 167 Op 1 8/0.000 + CDS 335483 - 336148 636 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 280 167 Op 2 . + CDS 336141 - 336479 347 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) + Term 336482 - 336542 9.3 - Term 336470 - 336530 9.1 281 168 Tu 1 . - CDS 336535 - 337386 925 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 337442 - 337501 5.0 + Prom 337406 - 337465 7.5 282 169 Op 1 . + CDS 337498 - 338613 1334 ## COG0845 Membrane-fusion protein + Term 338622 - 338663 -0.9 + Prom 338690 - 338749 3.6 283 169 Op 2 . + CDS 338838 - 339650 1136 ## COG4866 Uncharacterized conserved protein + Term 339655 - 339700 9.2 + Prom 339652 - 339711 5.1 284 170 Op 1 . + CDS 339856 - 341049 1301 ## COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 285 170 Op 2 . + CDS 341051 - 341920 229 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Term 342024 - 342067 8.2 + Prom 342043 - 342102 8.4 286 171 Tu 1 . + CDS 342236 - 346816 5947 ## COG0069 Glutamate synthase domain 2 + Term 346853 - 346913 14.2 287 172 Op 1 30/0.000 + CDS 347200 - 349878 3331 ## COG2812 DNA polymerase III, gamma/tau subunits + Prom 349938 - 349997 5.5 288 172 Op 2 23/0.000 + CDS 350020 - 350349 196 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 289 172 Op 3 . + CDS 350350 - 350946 909 ## COG0353 Recombinational DNA repair protein (RecF pathway) 290 172 Op 4 . + CDS 350951 - 351202 334 ## Vpar_1633 hypothetical protein 291 172 Op 5 . + CDS 351215 - 353803 2935 ## COG0210 Superfamily I DNA and RNA helicases 292 172 Op 6 . + CDS 353803 - 354921 948 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 293 173 Tu 1 . - CDS 354957 - 355079 56 ## - Prom 355105 - 355164 6.3 + Prom 355064 - 355123 8.8 294 174 Tu 1 . + CDS 355182 - 356306 1318 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 356407 - 356466 -0.0 + Prom 356343 - 356402 6.3 295 175 Op 1 . + CDS 356514 - 357404 568 ## Vpar_1629 hypothetical protein + Term 357440 - 357485 -0.7 + Prom 357407 - 357466 3.8 296 175 Op 2 . + CDS 357499 - 358071 516 ## Vpar_1628 hypothetical protein + Term 358074 - 358114 9.9 - Term 358067 - 358097 4.3 297 176 Tu 1 . - CDS 358105 - 359547 1124 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 359636 - 359695 10.5 + Prom 359744 - 359803 10.8 298 177 Op 1 . + CDS 359841 - 360248 392 ## Vpar_1626 hypothetical protein 299 177 Op 2 . + CDS 360315 - 360704 272 ## COG1846 Transcriptional regulators 300 177 Op 3 . + CDS 360740 - 361252 451 ## COG3467 Predicted flavin-nucleotide-binding protein + Term 361261 - 361314 9.5 + Prom 361394 - 361453 8.8 301 178 Tu 1 . + CDS 361491 - 362252 658 ## Vpar_1623 hypothetical protein + Prom 362305 - 362364 10.2 302 179 Tu 1 . + CDS 362384 - 363691 1057 ## Vpar_1622 hypothetical protein - Term 363763 - 363820 -0.7 303 180 Tu 1 . - CDS 363929 - 365296 1987 ## COG2252 Permeases - Prom 365320 - 365379 8.3 + Prom 365276 - 365335 7.8 304 181 Op 1 3/0.000 + CDS 365443 - 365862 521 ## COG1959 Predicted transcriptional regulator + Term 365942 - 365983 4.5 + Prom 366033 - 366092 6.4 305 181 Op 2 . + CDS 366124 - 367368 1215 ## COG0477 Permeases of the major facilitator superfamily + Term 367378 - 367430 15.5 + Prom 367389 - 367448 10.1 306 182 Tu 1 . + CDS 367680 - 368474 962 ## COG0710 3-dehydroquinate dehydratase + Term 368479 - 368507 1.0 307 183 Tu 1 . - CDS 368817 - 369422 651 ## Vpar_1616 RelB antitoxin - Prom 369526 - 369585 4.8 - Term 369668 - 369718 -0.6 308 184 Tu 1 . - CDS 369762 - 370997 1419 ## COG0169 Shikimate 5-dehydrogenase - Prom 371060 - 371119 3.2 - Term 371014 - 371053 7.7 309 185 Op 1 . - CDS 371122 - 372261 1188 ## COG0077 Prephenate dehydratase 310 185 Op 2 5/0.000 - CDS 372248 - 373342 1281 ## COG0082 Chorismate synthase 311 185 Op 3 3/0.000 - CDS 373332 - 374600 1472 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 312 185 Op 4 3/0.000 - CDS 374619 - 375671 1106 ## COG0337 3-dehydroquinate synthetase - Term 375682 - 375727 6.7 313 185 Op 5 . - CDS 375746 - 376759 1356 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 376826 - 376885 7.6 - Term 376805 - 376857 13.1 314 186 Tu 1 . - CDS 376891 - 376980 160 ## - Prom 377006 - 377065 7.4 + Prom 377090 - 377149 8.4 315 187 Tu 1 . + CDS 377233 - 377649 425 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 377660 - 377719 5.3 316 188 Tu 1 . + CDS 377750 - 378208 606 ## Vpar_1608 septicolysin - Term 378491 - 378550 5.6 317 189 Op 1 24/0.000 - CDS 378589 - 379617 1277 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 379744 - 379803 3.0 - Term 379669 - 379702 -0.2 318 189 Op 2 . - CDS 379817 - 382099 2334 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 382262 - 382321 10.5 - Term 382200 - 382245 6.1 319 190 Tu 1 . - CDS 382382 - 383941 961 ## Vpar_1605 hypothetical protein - Prom 383972 - 384031 5.0 + Prom 383996 - 384055 4.1 320 191 Op 1 . + CDS 384089 - 385261 1443 ## COG1454 Alcohol dehydrogenase, class IV 321 191 Op 2 . + CDS 385286 - 386116 541 ## gi|294794444|ref|ZP_06759580.1| hypothetical protein HMPREF0873_01044 322 191 Op 3 . + CDS 386147 - 387013 211 ## gi|294794445|ref|ZP_06759581.1| hypothetical protein HMPREF0873_01045 + Term 387142 - 387176 4.3 + Prom 387059 - 387118 7.3 323 192 Tu 1 . + CDS 387210 - 388529 1663 ## COG1301 Na+/H+-dicarboxylate symporters Predicted protein(s) >gi|292596540|gb|ADCV01000008.1| GENE 1 773 - 1522 1081 249 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0054 NR:ns ## KEGG: Vpar_0054 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 249 1 249 249 464 98.0 1e-129 MKKSTLLAFTAAVLFGSGVLHVNAASATFDDPLLLPNPAKAPTTGSVVLVPVASPQAVQS IHEFVKAWENAEKHIALAESKKNNHQALTKEEAKWLHSKDKHNYADYFRKHSLGYVHGQE TALNWNGENRNKNEYSYYTFPKYDKDQGYTNSYGYNVLRSMVDRMNELLQKQKAVGGPLT DEEAQALEDAMLDIMAQDQEHVSNEELRYYMNEAVWFATKQTVKNMSAEEPSVGDMHEIN LREAIQTDN >gi|292596540|gb|ADCV01000008.1| GENE 2 1614 - 11903 14238 3429 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 1295 2272 1194 2324 2712 140 28.0 4e-32 MNRIYRVIWSQVRGAYVVVSEIAKSHTRGSKSFVSNSAKATVKVGLAAMVLTCGSGLISG VDAAPIRGLSLSPGEGERDGGFTYLYPSEKAPYIQMYDYKTPGNPGQGHLYTDNKVFGIQ IGNRANARSNDGSVSGISIGDYSQSRALGIGLGHYAQSEQIGAIAVGSAAKAKGFNSLAM MRQAYAGEQYAAAIGTAASAQGSASLAMGHSALAKGAQSIAIGSANPDPLTDAKGTPYTA YDGSTNTQANAARAIAIGQGAKSNTVDSVAMGTGANVAAGTNYKGENFTHGIAIGSNALS QGIQGVAIGNSAAHYRDNGVALGNNAKTRAMDGIAIGNNAESGIQNDPQYKVNNSVAVGN SARAHGGSGVALGNDTYALGGSSVAAGNAAWALGERSTAIGNNAHSEGYGSIAMGREASA LSTQDGDKKNVVAIGDDAQATGSRSIALGVSAQAGTLERVRDRSVYKDNPELITKLKAQK EVTDAVAIGSEASVQENEGLALGSKATVNNVRGVALGANSATAAPVSTASETINGLKYNY AGGTADSTVSVGNTSTKRTITNVAAGRVSAQSTDAINGSQLYGVANAVGNVANSTKNILG GNAQVDQNGSITMTNIGDTGKNTIHEAIKSANSGWELQVNGQKVKDVKAPNRTVNFNAGK NIKLEGSGDNVTVATVDNANFNSVTTGSVSMSKTGINAGGYQITNVQSGGDTLTNAANIG DISRIAAKYDKYLQRGSATYEANGNGKINMTGTNGLTAEVTGLKNTYVTSGTVSNDGKRL TLTRNDNQTFDVDISKISNGLSKTDYRLIANPAAGSNGEYKVAADGSMTLTVADADGSNP KQVKLTNLASKEQQDINTTNITNNTNKIAKGLSFQGDNNVKINKQLGDTLGITGGATGAL SDNNIGVVAKDGNLNVKLAKDLTGLNSVTAGSVRVGKHSDNKNYVTGLDNKEWNVQNPTI TSGRAATEDQLKKVSDEIKTTNAAKTDYRLINNANSADGSYSVENNKVDLKVKDEAHPNS PANTVTINNIASKTELDKLTERAVKYDLNGTTVNKNKVTLEGQGGTTITNLKAGEVSSTS TDAVNGSQLHDVKIEAGKHSKVTVSDDNLKLTTTPATSTEGAKYDLRLNNKVTLGSGNNQ VVLDGTAGRVTAGSVVMGSQTVQNTKHASETGNYVTNLSNKSWDSTSIVSGRAATEDQLK KVSEQITQQGSSATDYRLVRNSSADGSYKVNDNGEVSLTVEDKNHAGVKEQVTINNIASK SSVDKLTDRAVKYDINNGVVDKTKVTLEGANGTTITNVKDGAVTATSKDAINGSQLFKTK EELINKGMKFGGDSGNVINKKLGEQVNVKGGITEASKLTAEDNIGVVSDGSNDLKVRLAK DLKGLNSVTVGDTKVTSNGVTISNGATNNASVSLTKTGLDNGGNKITNVARGTIDSDAVN LAQLKEVSNSASAANTKVAEGKNIKVDESIDNVTKAKTYTVGLKDEVTLGTGNTAINING TTGIVKAGTGDNAVTINGTNGTINSGKVTINGTTGTVNELTNRTWNPKAITNGQAATEDQ LKVVDNKIDTTKTEIVEKGLNFQGDAGTAIHKDLGQTLKISGGQADASKLSENNIGVVNN NGVLNVKLAKDLTGLNSVTTGATTINNNGLTIGGNTFVTSNGFNANDTQITNVKAGTEDN HAVNLKQLKEVSNNAAAAKTVVKAGKNINVTDSEDPLTKAKTYTVGLQDTVTLGSGNTAV NIDGTKGIVKAGEGNNAVTINGTNSTINAGNVAIDGVTGNINSGKVLVNGAKGTVNNLTN ITWDADHITSGQAATEDQLKVVDKKITDNGSNLTKKGLNFKGDDATSIHKDLGETLDVVG GTSDKAKLSDNNIGVVSENGKLNVKLAKELTGLTSVTTGATTINNEGLTIGGNKFVTANG FDANNTQIKNVKAGTDGNDAVNLNQLNEVKNASNTTVEGSENINVDSTVDPNTHAKTYKV ALKDNVTLGSGDKAININGTTGIVKAGDGANAVTINGTNGTINSGKVTVNGATGTVNNLT NISWDPAHITSGQAATEDQLKVVDKKITDNSTDLTKKGLNFQADSGELIHKDLGQTLDVV GGITEKSKLSDNNIGVVSENGKLNVKLAKDLTGLNSVTTGQTTINNDGLTINNKQFVTAN GFNANNTQIKNVTAGVEDNDAVNVKQLNDVKAASNTKVEGSKNINVDETVDNVTKAKTYT VALKDTVTLGSGNNAVNIDGTKGIVKAGDGANAVTINGVNSTINAGKVAIDGAIGNITSG KVLVNGANGTVNNLTNRTWDPNNITNGQAATEDQLKSVDQKVTDNSKKGLNFQADSGELI HKDLGQTLDVVGGVSDKAKLSDNNIGVVSENGKLNVKLAKDLTGLNSVTTGQTTINNDGL TINNKQFVTDNGFNANNTQIKNVTAGVEDNDAVNVKQLNDVKAASNTKVKGSKNIDVDEA VDPTTKAKTYTVALKDTVTLGSGNTAVNIDGTTGIVKAGNGTNAVTINGVTGNINAGKVL VNGANGTVNNLTNKTWTPGNIVSGQAATEDQLKVVDSKIDKNTEDLTKKGLNFQADSGEV IHKDLGQTLDVVGGITDKAKLSDNNIGVVSENGKLNVKLAKDLTGLNSVTTGQTTINNNG LTIGGNTFVTNNGFNANNTQIKNVKAGTEDSDAVNLKQLNEVKAASDTKVKGSKNIHVEE EINDLTKAKTYTVNLKDTVTLGSGNTSVHFDGTTGIIRAGEGANAVNINGTNGTINSGKV TINGGSGTVNDLTNRTWDPNKITNGQAATEDQLKVVDNKIDKNTEDLTKKGLNFKGDSGD KIHKDLGDTLNITGGEADASKLSNGNIGVVNENGNLNVKLAKNLKGLDSVTVGSDPNKQV VLDDKGVSVGGKTYISNEGLNANNQKITNVAAGVNDTDAVNVQQLKSSMAAATTTVKAGD SGNTTVETTVNADKSKTYTVDIKKDLNLRSVITTTDDKKFSTVTNGVGVTSTDTFGNKTT LTADNVKVSDGQNNTTQTTAKGVLVDNPTKSTELTVNGVVTTDKKTKRTSTTADGVVVTS GMGSEKVTTTVSSNGVAITTPPAGQGSPKDGTGAVTLTKDGLNNGGNKVVNMASGYAEGE DINNIADNSSSLTNGANIGDLKKGIDGLKKAGLDFAGDKGEFHRDLGQKVTVKGGVTDES KLSTANNIGVISDNNGSLNVRLAKDITGINSITTMDNSGHTTVTNGNGITIKNNGGGSVS LTSSGLNNGGNKITNVAPGEISSTSTDAVNGSQLNRVANSMNNVVNEVRQVGAMSSALSA LKPMAYDPYEPTQIMAGYGNYRGDSALALGVAHYKNESMMLHAGVAWAGSNSHMMANAGV TWKVGNRDGEAETADRYRKGPISSTYAMQRELAAMKAENQGLKGEVADLKAENEQMKANI AAMMARLGL >gi|292596540|gb|ADCV01000008.1| GENE 3 12423 - 21692 9929 3089 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 2042 2988 1797 2688 2712 136 28.0 9e-31 MNRIFKVIWSRTKGCYVVVAETAKNMSKRSTMTSVFAKMLGISICTVMLAGGIIPTEAQA STLKWGDNAQAKNGTVAIGDNSTAMADNSVALGTGATVTKTNRANVGNVQGVAIGRNATV EVNNGVAIGNLTKVASLNGFALGNTSWAGYDEAGNYVGADNDQAFGTNARAWGGSSMAFG NNAKASKGGAVAMGNGSQSRGEWGVAIGNGARALAAGARAIGANSTADATNAAAMGWDSV ASGEASIAIGETAKATKNNSIAMSKAAIAASDDSIAIGKNALVDVNQQRSIALGANSKTA NVVSTPNQHVNGLWYKNLAGGSADSTLSVGSDTVKRTITNVAAGRMNASSTDAINGSQLY AVANSLGNLATTTKNILGGNAALDPDTGKLTMSDIGFTGKSTIHDAIRYNKDNIDKGLFF YGDNFVQNQVKLGDTVRIKGGASGALADNNIGVQADGNGTLNVKLAKKLTGLDSVTAGTA TIDNKGVSVGNKLYVSTGGLNANNQQLRGVADGTGSQDAVNYGQLQRAINGTAKEAIVKA NDDGNITIRENSTAKGGKEYTVGLNYKITVGKGAASHPVTIDSGTGTVTGLTNTSWNVNN PAPVTGRAATEDQLKRVNERVNSNQYFINQNTQNISDNSSRIGANARNITKIQGDITTNK NDINTINNTLEKGLYFSSDTGASIKRKLGDTLVIKGGATGALSDNNIGVVSDGTGRLTVK LAKYLTGLESVNAGNTTISKNGLSVGARTYVTPDGINANNQKITGVANGTAPDDAVNFSQ LQNAIGGTAKATTVKGKDANVTVTEGTNANGGKEFTVGLGNKLTVGTAHPVNVDGTAGTV TGLTNIAWNVNNPQAVSGRAATEDQLKTVNTQVNTNKDKIAQNTTDIAQNATDIGKNKQD ITKNKTDIAQNTTDIGKNKTDIAQNKQNITQNTQDIATNKNAISTINTTIAKGLNFDGDS GAAINKQLGDKLSIKGGAAAANLTDNNIGVVSDGSTLNVKLAKTLTGLDSVTAGGTTINS SGLTVGGKTYVTPNGINANDKKITNVADGEVAANSKDAVNGGQLHAAKTELNNNINDAKT ELNKNIGDAKTELNKNINDAKTELNSNIDNAKTELNNNISTAKNDVINTGLKFDADTGGA KTNKLGSKVTVNGDDNITTEISQTGDDTKIGLKLKKDLNVTTITAADTVKAGTVTMGKQS GGAGGANGNFVTGLDNKSWNADNPQAVSGRAATEDQLKSVNDKVNTNVTNINKGLNFNGD SGAAINKKLGDTVTIKGGAMADLTDNNIGVVSDGSTLNVKLAKTLTGLDSVTAGGTTING SGLTVGGKTYVTPNGINANNQKITGLAKGTDPTDAVNFSQLQDAIGGTAKASTVKAKNSN ITVEEGTNAAGGKEYTVGLGDKITLGTANPVSVDGTTGTVTGLTNTTWDVDNPQAVSGRA ATEDQLKSVNTQVNTNKDKIAQNTTDIAQNATDIGKNKQDITKNKADIAQNTTDIGKNKT DIAQNKQNIAQNTQDITTNRNAISAINTTIAKGLNFDGDSGAVINKQLGDKLSIKGGAAA ANLTDNNIGVVSDGSTLNVKLAKTLTGLDSVTASGTTINAGGLTVGNKTYVSPNGINAND QKITNVANGDVVANSKDAVNGGQLHDAKTELNKNISDTKTELNKNIGDTKTELNKKIGDT KTELNNNINDAKTELTNKGLRFNADNDDEKTNKLGSKVTVNGDDNITTEISQTGEDTKIG FKLKKDLNVTSVTATETVKAGTVTMGKQSDGASPANMGNYVTGLDNQAWSVTNPTAVSGR AATEDQLKTVTEAIKTQGANATDFSLVANPTAGSNGDYTVAANGDVALTVQDKNHPAAQT KTVTIKDVASKSEVDKGLNFDGDSGTTINKKLGGTVAIKGGATAADLTDNNIGVVSDGTG TLNVKLAKTLTGLDSVTAGGTTINSGGLTVGNKTYVSPNGINANDQKITNVANGDVAANS KDAVNGGQLHDAKTELNKNIGDTKAELNKNISDTKTELNKNIGDTKTELNNNINDAKTEL TNKGLRFNADNNDEKTNKLGSKVTVNGDDNITTEISQTGDDTKIGLKLKKDLNVTTVTAA ETVKAGTVTMGKQSDGATPGNMGNYITGLDNKTWNAGNVVSGRAATEDQLKQALAGQTDT GLKFNANVGGVQTNKLGSTITVQGEGKAADTDYSGDNIKTFIKQDAATGNTTIDVKMNKN LKAESVKVGKDGKDGVSLTGPDAANGTDGKVAVTDKNGKDVVSMSGKDGVGHIGLTGKDG HSADIIADKGAADINGNEITRIKYQDENGTTHQVATKDDGMAYGGDSGTTIKKKLNEQLD IKGGVTNESELTENNIGVISKNNILNVRLAKNLKGLDSITFNNGTNGANGKTVVNGEGMT VQDKDGNPLTAITKDGVKITNGPSMTKDGIDAAGNKIINVADGTNPKDAVNKSQLDKAAA AATAIVTEGNNIKVDKTTNGDGSTNYKVGLKDQITMGSDATKQIAMDGTTGTIKAGDKVT IDGNKGTIKAGDKVEIDGDKGTIKAGNVAIDGTNGTIKAGDKVTIDGKDGKIAAGKVAVD GKDGHVTGLENKDWDPNNITSGRAATEDQLQKSHKALDNKINNLGDDITKKGMDFAGNTG DFHRDLGQKVTIKGEGQGADSDYSGENIKTVAENGNVTIKMAKNLKTDSITTKTVTADTV NTDKVKVGKNGQDGVSITGPDAANGTDGKVAVTGKDGKDAVSMSGKDGVGHIGLTGKDGR NADITADKGDSDLGGNAITRIKYQDEQGKTHQVATKDDGMKYGGDSGNVINKKLNEQINV VGGITDANKLTTEDNVGVVSDGTNLKVRMAKDLKGLTSVTTKDAGGNSTVVNGSGITITP ASGNTVSLTKDGLNNGGKTISNVGPGVNGTDAVNVNQLKGVTEGMANAINSVAGETQRVG AHAAAMSALKPIQYDPLEPTQVMAGIGNYRGETAAALGVAHYTSEDTMFHAGVSVGSRHN MVNAGVTRKFGSSDEKKAIPERYKGGPISSMYVMQDEMTALKAENARMKAQDEKLTADYA ALKEDNLRLQKDNEETKRQLALIMSRLGM >gi|292596540|gb|ADCV01000008.1| GENE 4 22172 - 28273 7518 2033 aa, chain - ## HITS:1 COG:PM1570 KEGG:ns NR:ns ## COG: PM1570 COG5295 # Protein_GI_number: 15603435 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 68 571 467 953 1299 116 32.0 4e-25 MNRVFKVIWNRTKGCYVVVAETAKNMTKRSSLSVVFSKMVGATAVAVMLTGVMMPTDALG APITRGNGAQAENDGGIAIGDNTASKGDYSISIGTNASVGRGDTDEGKTQSGIAIGQGAT VTVDVAKGADVPADQRTGGIAIGQGATTKVVNAIAVGSGTSADGAQAVTIGHNSRSITNN SVALGNETRVASLNGFALGNNARAGYDETNKLIGLPNDQAFGSNARAYGGSSMAFGNDAK SSGGGAVSIGNGSQSRGDWAVAIGNGSKALKQGSSALGTNATTNSSHSTALGWGSTTNGY ADIAAGDGSVASGGNSLAIGVQSSTSTGAVGAVALGLSSKAEQTNSMALGVSANAAHERS VALGANSKTDATVSTPNQLVNGLWYKNYAGGSADSTISVGSDTVKRTITNVAAGRVNAQS TDAINGSQLYGVANTLGNLASTTKGILGGNAALDPDTGNLSMSNIGNTGKGTIHDAIKFN KDTIDKGLNFDANTGGTKNNLLGSKVTIKGDGNNINAAITQANGDTTINMTLGNTVTIGA ANPVTINGTTGHVTGLQNKDWNVDNPVAVSGRAATEDQLKKVNDKVNTNKADIDKNTGDI NTNKQNITKNAGDIANNKTDIAKNKQDISTINTTINKGLNFAGDTGTVSNRKLGDTVTVK GGAIGALSDGNIGVDSDGNGTLNVKLAKTLTGLDSVTAGNTKIDNGGLTVGGKNYVSTTG LNANNQKITNVANGSDPNDAVNYSQLQAAIGGTAKASTVKAKDANVTVTESTNAAGGKEY TVGLGNKITVGTANPVTVDGDAGHVTGLTNTDWNVDNPVAVSGRGATEDQLKKVNDKVNT NKTAIDKGLNFDGDSGAVINKKLGEKLSVKGGATGTLSDGNIGVESDGNGTLNVKLAKTL SGLDSVTAGGTTINNSGLTVGGKTYVSPTGINANDQKVTNVANGDVSANSKDAVNGGQLH DAKNELINKGLRFDADNNDVKTNKLGSKVTVNGDGNITTEITQTGDDTTIGVKLNKNLNV QTLTATDTVKAGGVTMGKHADSNNYVTGLDNKDWDVNTSNPVSGRAATEDQLKKISEVIN KQGAAATDYRLVKNAAAADGAYTVDSNGDVDLTVEDKNHAGTKETVKIKDVASKSSLDKL NDRAVKYDLDNNGAVDKTKVTYEGSPYANKTGGTHVTNVAYATGNDGSEAVNVDYLKDRI KDSEDALTNKGLKFDANSGGVKTNKLGSTVTVKGEGADADANYSGENLKTFITQDQDGNT TIDVKMNKNLKADSVAIAGKNGQDGVTLKGGDAKNGVDGTSINRLVTEDKDGNTHTLATL DDGMMYGGDTGNVIKKKLNNQVNVKGGISDESKLAAEDNIGVVSDGSDTLKLRLAKELKG LTSATFTNGGNNTVINGDGMTINRAGGDAVSLTKDGLNNGGNKITNVADGTDPNDAVNKS QLDKATAAASTTVSAGNNITVTPSTNANGSKNYEVSLKDQVTLGSDATKQIAMDGTTGTI KAGDKVTIDGNKGTIKAGNVTIDGENGTIKAGDKVTIDGKDGKIAAGKVSVDGKDGYVTG LENKDWDPDNITSGRAATEDQLQKSHKSLDNKINNLGDEITKKGMNFAGNTGEFHRDLGQ KVTIKGEGTESDDKYSGENIKTVADQDGNVNIKMAKDLKTDSLTTDKVKVGKNGKDGVSI TGPNGADGTDGKVGITGKDGKDAVSMSGKDGVGHIGLTGKDGRNADITVDKGDPDLDGNA ITRIKYQDENGKTHQVATKDDGMKYGGDSGSVIKKKLNEQVNVVGGITDASKLTTEDNLG VVSDGTGNLKVRMAKDLKGLETVTTKDATGNTTVMNGGGVTITPASGNAVSLTKDGLNNG GNTITNVGPGVNGTDAVNVNQLKGATDGLANAINSVAGETQRVGAHAAAMSALKPIQYDP LEPTQVMAGIGNYRGETAAALGVAHYTAEDTMFHVGVSVGSHHNMVNAGVTRKFGTSDAK KAVPERYKGGPISSMYVMQDEMTALKAKYEKVQRDNEEMRAQIALLMQQAGLK >gi|292596540|gb|ADCV01000008.1| GENE 5 28793 - 28936 60 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794162|ref|ZP_06759298.1| ## NR: gi|294794162|ref|ZP_06759298.1| hypothetical protein HMPREF0873_00759 [Veillonella sp. 3_1_44] # 1 47 1 47 47 73 100.0 4e-12 MTGEIQIAFIPFFIPSPSKGVSAGFIGFIEIEHMCIKTIYTITPCVF >gi|292596540|gb|ADCV01000008.1| GENE 6 28978 - 29244 396 88 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0050 NR:ns ## KEGG: Vpar_0050 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 88 1 88 88 156 100.0 2e-37 MSELNILQQNIDKPNTVTEEDIVVTRDNQTFTIKGRFNGEEGVFTYDADVQPNDQLQFLH HNFTAIVKKITYKVIQGQRITLIAKLYA >gi|292596540|gb|ADCV01000008.1| GENE 7 29357 - 30001 888 214 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0049 NR:ns ## KEGG: Vpar_0049 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 214 1 214 214 402 98.0 1e-111 MKFKTFMPVLALACVCAVGQADAAQDRLMMPEQPAEPLNVIEAEVAVPVPSEEVRDVVNA FTQFQLDQKGKRIMDDSRVMTGQERYRNNVLYYMNVRRSWYIVSHRYKNDSYGRLALDRL YNDYKQFFTEHATVSEDAKLDYAQQIIDILDRNTANVHDDELRFYMNEMVIFSLNEAMKD GNNRVKPVDEKAVPAMDELHTVDLRKAINAPTIQ >gi|292596540|gb|ADCV01000008.1| GENE 8 30108 - 35606 6910 1832 aa, chain - ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 295 1000 929 1674 2712 132 30.0 8e-30 MNRIYNVIWSKAKNCYVVVSELVKSGGGKASVNSARTSITFRAALCAFAITGCLVSGIAE ANVVQGPGAAATGSNSVAVGDNAKSAGAKSVAIGNDAATLATSENGIAIGNGAKAEGQQR VKVPYPAGTIAIGQGSVAKENGDIVIGRQAKSTISKYHQQPGSGAVVMGAEAASYGSRGD VVIGAAAEANIIRKNATVDGDGQLFSQSVAIGSVAKVYGTQSVAIGGDVRSIGQSSIAIG GDDIDQAKPDLYKAIPDLSVPGTQKNFNREVAALYPSGLGTAGLNDSKNYVNTASIGNAS LAIGMMTQSLGTGSNAIGANSLSKGVASSAIGAMARSWGNNSLAIGSQAGAYGEKSTSLG DANIVGFDMTNATLSGSAAGALGRGNKVYGNNAYAIGSENTVGTATVTETTESNGDKIKK VTAGTVKGNTAGAFGYKNTITTDNSYVVGSNSTISADNGMVLGNSATVTGANGLALGNNT KVANDNAVAIGNGSETAAAVATSSATINGVTHNFAGTNPASTVSVGKAGMERTVTNVAAG RISATSTDAINGSQLFAVKTEVEKGVSYAGDVKAAAAADNKFTRKLGEQTNVVGGVTDVT KLTDNNIGVVSNGTDTLNIKLAKTLTGLDSVTAGGTTINNGGLTVDGKNYVSPNGINANN QKITNVADGTNSNDAVNYGQLQNAINSIDKAPTVKAKDANVTVTEGTNVAGGKEYIVGLG NTINVGTAHPVTVDGNAGHVTGLQNTDWNVDNPVAVPGRAATEDQLKKVNDTVNTNKDQI NKNKQAIADNKQNITTNAGNIANNTQNIAKNAGDIVTINKTIEKGLNFDGDSGATINKKL GDTVAVKGGATGTLSDNNIGVVSDGTGTLNVKLAKTLTGLDSVTAGDTTINNGGLTVGGK NYVSPNGINANDQKVTNVANGDVAPNSKDAVNGGQLHQVKQDLGDQITNAKNDLNNKIDN TKTDLINKGLRFNADNDDEKTNKLGSKVTVNGDDNITTEITQTGDDTKIALKLNKNLNVT SVTATDTVKAGDVTMGKQADGANPGNTGNYITGLDNKTWDPGNVVSGRAATEDQLKQALA NQTATGLKFDANVGGVQTSKLGSTVIVQGEGKAADSDYSGENIKTFIKQDAATGNTTIDV KMSKNLKAESVKVGKGDNKDGVSITGPDGANGTDGKVGITGKDGKEAVSMSGKDGVGHIG LNGKDGRSADITAEKGDPDIEGNEITRIKYQDENGKTHQVATKDDGMKYGGDSGAVINKK LNEQVNVIGGITDASKLTTEDNLGVVSDGSNNLKVRMAKDLKGLETVTTKDAAGNTTVVN GGGMKITPASGNPVSLTKDGLDNGGNKITNVAAGTAPTDAVNKSQLDQAAAAATTTVTAG DNIKVTPSDNPNGSKNYEVSLKDQVTLGSDPKKQIAIDGNTGTIKAGDKVEIDGDKGTIK VGKDGQDGVSITGPDATNGTDGKVGIAGKDGKDAVSMSGKDGVGHIGLNGKDGRSADISV EKGDPDIEGNEITRIKYQDENGKTHQVATKDDGMKYGGDSGAVINKKLNEQVNVIGGITD ASKLTTEDNLGVVSDGTGNLKVRMAKDLKGLETVTTKDAAGNTTVVNGGGVTITPASGNA VSLTKDGLNNGGNTITNVAAGVNGTDAVNVNQLKGATDKMANAINAVAGETQRVGAHAAA MAALKPIQYDPLEPTQVMAGVGNYRGETAAALGVAHYSAEDTMFHVGVSVGGHHNMVNAG VTHKFGNSDAKKAIPERYKGGPISSVYVLQDEVIALKAENARMQESLNELSSVKADNARM QQRIDELSSVKEDNEQMKAQIALLMQQAGLTK >gi|292596540|gb|ADCV01000008.1| GENE 9 36026 - 36670 815 214 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0049 NR:ns ## KEGG: Vpar_0049 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 214 1 214 214 390 96.0 1e-107 MKFKTFMPVLALAYVCAVGQADAAQDRLMMPEQPAEPLNVIEAEVAIPVPSEEVRDVVNA FTQFQLDQKGKYIMDDSRVMKGQERYRNNVLYYMNVRRSWYIVSHRYKNDSYARMALDRL YNDYKQFFTEHVTVSEDAKLDYAQQIIDILDRNTANVHDDELRFYMNEMVIFSLNEAMKD GNNRVKPVDEKVAPAMDELHTVDLRKAINAPTIQ >gi|292596540|gb|ADCV01000008.1| GENE 10 36758 - 45244 11156 2828 aa, chain - ## HITS:1 COG:SMc01708 KEGG:ns NR:ns ## COG: SMc01708 COG5295 # Protein_GI_number: 15964211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Sinorhizobium meliloti # 144 762 98 722 1291 115 27.0 2e-24 MNRIYNVIWSKTKKCYVVVSEIVKTGGGKVKSVQNGTTWARMSAIMAVAALLMGGNITTV NAATYTAMTINDVNGAGYATGNVVYSEGSYLYNYQNPGNLTPFDNSHLYNGTDRGNYTEN SFAGIAIGKNTNIQETGNPTYYSGLAIGNYAQATGGISFALGHYAQALSPSAMALGTATK ASGFNSLAMMRQSAAEGEFSTALGTASWAKGNGSFAMGYSATAKADQSIAIGAAETIKLP GQQHGTPSAKYNGDGNTVTEGARSLAFGTKARTAVGADDSMAFGSSSSTGGANAVAMGYS ANASAENAFAIGNTAQSSAQNAVAMGKSANASGVSSFAMGSSSNAAGADAIAMGSSSQAK LSNSIALGGNAKSLGADALALGGAANASKDGAIAIGKEAKANNTNTTAIGLGATVTGTNS MAIGTNAVAESNNSLALGTGTEVRGALVNGYSAFTNQQNNNVANGVVAVGNVGSERRIIN VAGGENDTDATNVKQLKFVNSNLAKSIAGPTYTGYEANGSTYKAPDFNIKNSTYHTVKEA VEAAQTNFFSAKGTSADANYDNTGATGNNATAAGVRTSAAGNFATAVGADATAANTNSTA IGYKAKSSVDDGVALGANSVASVAAGTAGYNVKTADSRTNGYSGLTGAALTSTMGAVSVG DGGTKTRQITNVAAGTADTDAVNVAQLRNVNLKVAGNTGKNDVLLDNQTLTVKGDGSYVT TSVNNQTIDVALTDATKNKIDNAANKDLSNITDGGKSVIRDEAQKAVKVVAGKNTTITEG TDGTYKTYKVDVDAPDYQLVENSSAADKAYTVSGNKVDLTVQDAKNPANKKTVTIKDIAS KTELDTTKTELINKGLKFDADNGGEKTNKLGSKVTVAGDGTNINTTITQTGDDTTIKVAL GQDINVNTVTATRTVKAGTATMGTQSVTDNKSAAQNGNFVSGLDNKNWTLTDPAYVSGRA ATEDQLKIVSDAVKAANASASDYRLITNPNNAADGSYKVDNNKVDLQVKDDKSGTVNTVT IKDIASKTELDKVKDRSVKYDGNTGHDTVTLEGANGTKITNLKDGNVAAGSKDAVNGGQL HQVKQDLGDQITNTKNELNNKIDTTKQDLIDKGLKFDANTGGEKTNKLGSKVAVKGDNSN IITEISQDANGDSTIDVKLGKDLTVETITATGTNGKDGKIGINGKDGVTTNISVTRDGQP GVDGAPGTTTTRIMYQKPDGTNEEVATLNDGLKFKGDMGATSNVKLNKQVDITGGVTSAS DLATGNNIGVTSVAVGADGNAKLQLQLAKNLTGLQSVTASDTVKAGTATVGNHTVADNKG ANQTGNFVTGLDNTSWNIADPVYVPNRAATEEQLKTVSDAINKANASATDYRLIANPNNA ADGSYKVENNQVDLKVKDEKSKDVKTVTIKDIASKTELDNVKDRSVKYDGNTGHDTVTLE GPNGTKITNLKDGNVAAGSKDAVNGGQLHQVKQDLGDQITNTKNDLINTGLKFDANVGGV KTNKLGSTVTIQGEGTAADADYSGENLKTFIKQDAVTGNTTIDVKMNKNLKAESVKVGKN GKDGVSITGPDTANGTDGKVAVTDKNGKEAVSISGKDGVGHIGLTGPAGTNGVNGTNGID LSVKPGYNDPATGVKGEKGVDGTNGLTRIVYTDGNGEHQVATMEDGLQFTGNNTGTVNKQ KLNSLVKVQGEGVTEAESTTFKSASGNINVKADGTDKLELQLAKDLKNLDSVTAAKTVKA GDATMGGQTVNNAAGDSETGNYVTGLDNKDWDADKIVSGRAATEDQLKKALDAQSANSTD YRLIKNQAAGSNGDYTVDANGDVALTVQDKNHPDKTETVTIKDIASKSKLDKLDDRAVKY DLDPTGNLDKSKVTYEGPAYNNKQGGTHVTNVAYVTGNDGSEAVNVDYLNDKIKDSADAL TNKGLKFDANQGGEKTNKLGSKVTIKGEGTAADDDYSGENLKTFITQDPASGDTTINVKM NKNLKAESVKVGKDGKDGVSITGPDNGTDGKVAVTGKDGKEAVSISGKDGVGHIGLNGKD GRSADIFVEKGDPDLNGNEITRIKYTDENGKTHQVATKDDGMAYGGDSGNVIKKKLNEQL DIKGGVTNEADLTENNIGVISKNNILNVRLAKDLKDLNSITFNNGANGANGKTVVNGAGM TINDAAGNPLTAVTKDGVKITDGPSMTKDGIDAAGNKITNVQDGNVAKDSKDAVNGGQLH DAVESLKSKGFGLEAEDGQSVKKALGETVKVKGDDTNIKTSVDDGAVKVELKKDITVDTV TATTVTTGDTKMDTNGVTIKDGANEATKLTKDGLQINDGGNKAVTINKDGLTIENGPKVT KDGIDAADKKITNVADGTIGAGSKDAVNGGQLHTAIEDIKSTGFGLKAEDGNSVKKPLGE TIDLKGDGNIKTSVDNGAIKMALNDKITLGQDPAKQVKIDGSEGTVTAGNGDKEVKLDGS AGTITAGKGDNQVKIDGNNGSVTANTVKAGDVVVGKQTSDGKEGNFVTGLDNKTWDPENP VAVPGRAATEDQLKAVNDDFNNKARTGRVFQGDQLGDSGKVVRGLGDTMNLTGGADVNRL ADNNIGVVKNAAGDGYNIKLAKDLKGLESVTTTDAAGNTTVMNGGGMTITPAQGNAVSLT KDGLNNGGNRITNVGPGVDGTDAVNVNQLSSAMRSVDGKIADVGATSAAISGLKPLQYDP LEPTQVLAAVGHYKGSTAAAVGVAHYTNESTMFHMGVSLGGHDNMINAGVSYKFGTSDAK KAVPARYKAGPISSAYVLQDEVTALKAENERMKQHDLELTAKYDQVQRDNEEMKAQIALL MQQAGLTK >gi|292596540|gb|ADCV01000008.1| GENE 11 45636 - 45746 139 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIYIVKAEALGPRLFRVPVGDNFSVYKIILSMKVLN >gi|292596540|gb|ADCV01000008.1| GENE 12 45756 - 48161 2722 801 aa, chain - ## HITS:1 COG:XF1529 KEGG:ns NR:ns ## COG: XF1529 COG5295 # Protein_GI_number: 15838130 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Xylella fastidiosa 9a5c # 395 539 204 349 2059 72 42.0 4e-12 MSKRKLILSVLINGVLLSSLYVAGAVDMTLGSGNGVAIGTGSSAPKAENVAVGKGASISY SNGASEATGDVAIGNGAGINNYASQGGSIAIGKNAKVENMAGGGEASFALGQTTYSWNLF SSARIPADPTKVVGSVAIGDNTFARTGSTMIGSHNYKGELGDTTVDSASTRKDALNVYAT TIGANSFSNGAFTTSTGVYNIISSEYNGGRLANPLKNFGATINGALNSVESKTGSYYSGV ANSIVGIANRTFNSNGSLVFGAGNEITNSVTRISAPSSGGNSAKELAETLRSAVKNSNGG GSTMAFGSGNKADYTLRSALMGVNNTLTGSQGKESENTMLTGFHNTADKVSNTTVIGSEN TVTNSKNSLVMGDNREVKDVNHAVLIGSTDSKTTTSVNNAVAVGHNTNVTVEGGVALGSE SKATVAAGSVGYDPSTKAQSTNTDSTWKATKSAVSVGDANNNITRQITSVAAGTKDTDAV NVAQLKKLQNQVNANGSTTVSAGKHINVTTTTNGTTKDYKVSLSDDITNQITNNTTNINN IQGDVTNIKKNVTNIQGDITNIKQDVTNMGRNVARLDKKVNKSVAGAAALAALHPLDFDP DAKWDFAAGYGHYHDGNAAALGAFYRPNEDLQFSVGSTVGNGETVVNAGMSVKVGAHSNV SRSRVAIGKEVLELKKTVAVQNAQIQKLTALLNGLAGTNMKADHSTLFPDVPNNHWAYAA VSDLSRRGLVEGYPDGTFGGDRMLTRYEFAQIVYRAIQNGVAVDDRLVSEFGPEMALFRV DTIAKNHEGQPTIERVRVNKK >gi|292596540|gb|ADCV01000008.1| GENE 13 48426 - 49433 1061 335 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0040 NR:ns ## KEGG: Vpar_0040 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 335 13 347 347 632 94.0 1e-180 MFVMPVSGEQVSKAEQPIQGTRVKQVHSESTVALSDDSDTFHVNSSHTPDHVIGQGGLEM PDSTDKKTTRYSDTDAVNSALQAVVMTGVHSAMHGSKAKPWMQRTVVSLRFQKNWKPLYG VETLQPLGYYDETSRHVWFTQERLANAADTGTTANVGIGYRRIAANDDHYYGGNLFYDHR FRGNHSRMSVGLEYVSGIGAFRMNWYRGVSSERSLDGATRLESVSNGYTAEYGTSFKNAR WARVYMEAYRWQLRRSEDKHGLRIGTELQLTPRISVDMGYNKPEHEHGSPYGKIMFRLAG VDTAWFGGNHRSDAKASVRANMLENVRRQHTVHVD >gi|292596540|gb|ADCV01000008.1| GENE 14 49889 - 51298 1420 469 aa, chain + ## HITS:1 COG:FN0735 KEGG:ns NR:ns ## COG: FN0735 COG5295 # Protein_GI_number: 19704070 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 146 460 310 575 617 107 32.0 6e-23 MSKKRFVLASVVMVALSASVYAAPVNIVDNNGNIGKEGQTFTAGTGGNITLGENAGAANG KGKNVNAQGNNIALGAAAGAGSSGGGNINLGAKSFRGSTGDFNVTVGFAAGNASQLTNSI VMGTQSGENSAGDKNVWIGNFQGANSKASNSVAIGSNSTVNGQFDLAVGHYVNVKAAKGL AVGSYNTLSEKATASGVFGQGEYGKTAIDAANSYSIGNYNHISGENTFVLGNNVTTSLKN GVVLGNDSADGDVVGTASHTFENGTTVNYAGTAPVSTVSVGAKGKERTITNLAAGRVSAT STDAVNGSQLYGVHQMIDTLGKSTSQQLNNSISTIEKSVQHVSQEVQRVESESNKGDARA AALAALHPLPYDPDNRVQYMAGYGHYKNANAVALGVGYYHKDNLLLTTGFTMNNHVMANV GITYRPGKSLSTAMSPASYNALEQRVQALEAQNKDLQETVKRLVEKLEK >gi|292596540|gb|ADCV01000008.1| GENE 15 51629 - 51730 174 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDYELIMLLLQVMAVVIAFGALVALICFGKSK >gi|292596540|gb|ADCV01000008.1| GENE 16 51892 - 52218 475 108 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0035 NR:ns ## KEGG: Vpar_0035 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 108 1 108 108 189 99.0 2e-47 MRKFLYMLAVLLVLIGISTNDVEARQDVYATTYLGNNWYVDQDSVKRVGDILNFTVYTTA GLSYKVTSSDDNYYNADVFYDNNKLVSDNGQSVWKSPGMMAAMRVARK >gi|292596540|gb|ADCV01000008.1| GENE 17 52285 - 53361 652 358 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0034 NR:ns ## KEGG: Vpar_0034 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 358 1 358 358 577 93.0 1e-163 MRASNIELLRIISMILIIMHHFSVHGCFPFTPDLTFNKVFLQVFGLGGKAGVVAFVMITG YFMVSSSFKLHKFAKLVGQIWFYSIAMLGVAMGLGLDTVTSRNMMLALLPIGAMSWFAQN FLVLYLLTPIINRVLHWLQHTYYVILLVASTVIWFLIPTVLNLWPNVPHTTFGFKHIFSF IVFYSMGAYIKLYGSHLTRTMGVIVSAIGFVGAFLGDILVDVLAMTNPVYMKQIFYFTQN DYGFFQLLLGIGLFIIFLKAKITYRPWINVVASTTFGIYLLHDNKLFLHYMWDNVLATYQ YYDSIVLPLYAIFVVALIFVVGMTVDYVRLAFIEKPVMKAITPSLDRIQSRVEKVLPL >gi|292596540|gb|ADCV01000008.1| GENE 18 53597 - 54652 615 351 aa, chain - ## HITS:1 COG:BH3364 KEGG:ns NR:ns ## COG: BH3364 COG1088 # Protein_GI_number: 15615926 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Bacillus halodurans # 26 345 3 313 321 100 26.0 4e-21 MNDVLSYELERTAKDIHIFLSKLSGKTILITGTTGFIGSMLTRLFLVSNMKYGTDINIIC SVRNIEKAEALFSNLKNSEQLAYITNGLVACNDSVDYIFHTAAPTTSKFFVTQPVETLNG SISTTLDVLQYATKNKVKKIVYLSSMEQYGIQQVDYQNMTEEDLGYIDHLDVRSSYSEGK RICECYCSAYFHEYNVPVCIARVAQCFGPGLSLLDNRVSMQFAKSVMHNKNITLHTAGQS VSNFCYITDVLSALVLLLIKGECGEAYNICNSNETRSIKDIANLVAKEVARGKIDVVFDI PDNANQYGYAHDVKFILNSEKIQSLGWKPKINMVTGYRNLIDYIKYEKNIS >gi|292596540|gb|ADCV01000008.1| GENE 19 54658 - 55578 705 306 aa, chain - ## HITS:1 COG:TM0509 KEGG:ns NR:ns ## COG: TM0509 COG0451 # Protein_GI_number: 15643275 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Thermotoga maritima # 1 305 1 309 309 250 44.0 2e-66 MRITVTGGAGFIGSHLVDRLIEDGHTVQVIDNLYTGNKEFVHSKAQFVELDIRDPKLYSV LEEFRPDYIFHEAAQTEVSTSMSDPMLDCDINLIGLINLLNAAVKLDVKKFLMPSSAAVY GNLDTLPLNEEMIGNPSSFYGLTKLTTEHYLRIYHEAFGLPYICYRYSNVFGPRQGNGGE GGVISIFAKAIVQGSPIIIYGDGKQTRDFIYVDDVVEANILGMQHQVTGIYNVSTGISSS VNLLVDEFRNISGKDIEVVYDKPRLGDIRDSVLATDKSEKELLFTAKYNLHDGLIKTYEY FKTVEG >gi|292596540|gb|ADCV01000008.1| GENE 20 55592 - 57100 283 502 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0031 NR:ns ## KEGG: Vpar_0031 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 502 1 502 502 841 99.0 0 MRTVSAIKNINSTLIVYGFNMVLQFIIRFVLLYYLSIEYLGLNGLFDNILTVLSLTELGI GPAIIFSLYSPLANHDLETAKSIMRIFKKAYIYIGTLILFLGLCISPFVQHLIKVPPNIA YLNIFFLLFVVDTGISYFYSYKKCLLIADQKQYIANYYRGITQLIGSLFQIALVILTHSF WVYIILRICMTFSENFLIARKADHLYSFLNEKNIQPLNKDIYQSIIRNIKALILHKIGGV TVFGTSNIILSKFVGLSAVALYTNYYLIINGIDKLSDQVFNALKASVGNLNESHDDAHKL VIFKRLEFMTAYLACFICSNLYLLLNPFITIWLGNSYRFDESIVLWMVINFYLMFMRKGV LVFKDAMGLFWQNRYMSLIEALINLGSSIVLVQYFDVWGVLLAMFISTICMPFIVEPYVL FKYGLRWSLVSYFKLYFRYTLITFILVYFSKFLSQFIALDSGWFGLLLGVVCNSIFIIVA WGILFFRSKELRFYLDLIKSRL >gi|292596540|gb|ADCV01000008.1| GENE 21 57110 - 57829 299 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 5 232 7 227 234 119 33 1e-25 MNIGIIFAGGTGQRMSSTGTPKQLLEVNGKPILVYTLEHFQNNDNIDGIVLVVLESIIGE VSKLVQKYSLDKVKSIIPGGKTGQESIYLGIQESSRLYDQDSIVLLHDGVRPIISDELIN MCISSTKTYGNAITVSQAIETIVLKDNELSHVGKILSRDECLLAKAPQCFYLKDIYKAHE KARSENLEFIDSASMMQFYGTELFTVIGPAENIKITTPIDFYTFKAYLEVKNSLNIMGL >gi|292596540|gb|ADCV01000008.1| GENE 22 57846 - 58640 473 264 aa, chain - ## HITS:1 COG:SP1274 KEGG:ns NR:ns ## COG: SP1274 COG3475 # Protein_GI_number: 15901134 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 2 262 4 266 269 122 34.0 9e-28 MLTISEIQDHLYIMLKEFDSFCKENDIKYSLSGGSLLGAIRHKGFIPWDDDIDICLSRPD YEKLITIFPKVFHSNYLLRSIERNNSKYPFARLEKLDIKIEDEYSNANQFLFMDIMPVDG LPNDKNEVVSIYKKRKIYSKMLELCDAKLGHGKSFSRAFIKSILIIFAKCVGYKYWAHKL DQLAKQYDYNTSDYVGAITGGVYGEAECMVKDAFEKRVPIEFRDLKLEVFSCYDTYLSNL YGRNYMEIPPEGKRKISSIRAYEI >gi|292596540|gb|ADCV01000008.1| GENE 23 58653 - 59654 406 333 aa, chain - ## HITS:1 COG:AGl1972_2 KEGG:ns NR:ns ## COG: AGl1972_2 COG0726 # Protein_GI_number: 15891101 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 93 326 76 310 319 99 27.0 8e-21 MSLKGYIKENLPWIRSIYRKRLAPINLIHNIYDKPVVVLLYHRVNYLNRDLFNINVTPDN FERHIRILKNHYNVITFNDLKRNDIKEPSVIITFDDGYYDNYKYAFPILKKYQVPATIFI TSGGVDTGKEFWWDRLETVLFENKNLRESIELDILNQRHIFDVSDDKKRLHSFYTLHHML FSLHPNERDMMLDRWYESYGLKVNPNNRTMTSSELIELYQSQLVTLGAHTIHHPALKQIS REEQIQEIQSSKLFLENLLHTDIDIFAYPFGHKESFDQVTEQIVQDLGFTYSVSTKRAQL HSNTNPFSIPRFGIEDWSEDEFIRQMKLVWFEN >gi|292596540|gb|ADCV01000008.1| GENE 24 59651 - 60742 595 363 aa, chain - ## HITS:1 COG:SP0353 KEGG:ns NR:ns ## COG: SP0353 COG0438 # Protein_GI_number: 15900282 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 316 1 317 372 147 29.0 4e-35 MIKVIELPIDKDMGGLTSYVLQLYRMIDKEEFELTLLSYDDPQNFDVNYNVETVSRPYHT IQFYKKMKCLLSEGKDIIHFHQSYVNIIPILIAKLAGFKTIILHAHSSSIDDNRKIVRFL KTGLHKVGRFLLPYLVDTYVGCSTKASEWMFPRKCIDSDSYYLLHNAIDLDLYDRNINLG LEVRQKFNIPKDALVVGHIGRFTPVKNHPFIIDIFKEVLKQNPNSYLFLLGDGVERHKIE SLVKSAAISDKVIFMGYVNNTVDIMQAIDIMILPSLFEGLPLIAIESQALGIPILVSDTI TQEVVLTDLCRTLPIDNPKPWAYEIISKFGKNKYIDYRARIKELGYDSSVAIKKIENIYK GKQ >gi|292596540|gb|ADCV01000008.1| GENE 25 60753 - 61514 677 253 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0026 NR:ns ## KEGG: Vpar_0026 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 253 1 253 253 498 98.0 1e-139 MNIKILVATHKQYWMPEDSVYMPIHVGRDGKADIGYTGDHTGDNISSKNANYCELTGLYW AWKNLDADYIGLVHYRRYFTRKEVRSVEDKKNQILTGAEWENLLSQYPVVVADKRKYYIE SNRSHYNNAHHSSGLDAAEQIIAEKYPEYSAAFTKVCNRTWAHMFNMFVMRRDLFDQYCE WMFSILEEIEKRVDISDYDTYEARIYGFVSEILLDVWIEANNISYKEQNVSFMEPQNWIK KGGLFLKRKLFGR >gi|292596540|gb|ADCV01000008.1| GENE 26 61504 - 63114 632 536 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0025 NR:ns ## KEGG: Vpar_0025 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 536 1 536 536 872 94.0 0 MSSNKYIDSLIGLSFIFVIFPVIPMFLRVGFLGGEFSAKASFYTLFICLVYSVWLKRYSL RQYHLYWKELLYIVFLGFSITVSLIHGLINFPYYDLVPGTNYINHKLEVINQFIFNKAFS EYTLSVIHFGFRVLKNSLTQLIFTFGFSYLIFYWYKDRSETILKIVSKGSLISATLVVIF GVIELFYFGKQQWALSLLTYIRPIVHAIEINNTWWPPLFWPELQFRSLFPEPSFLGIYTV ITIPFIWNVIFSSKNKKLLIFSSILLLLLEMITLLANSRTATVLLIIDHILLVVALCIQF RNKKFVVHTVLVTLIGLLAFIGNIVYTSNVLYVQDTSIKSTTSRTVKNISTQQVANEIKS YGENNISSLSKKDRRSNNQRYGVMKADLDIFKENPLLGIGQGLRTPYVLNHLDEDTLNGA EVKMWIENIKNKGLINISIPMLGEYTSRLSETGIISFVLFMGPIAFLLVRLLIYVFKNPK DIWIIFFTIAYIESLLTGIGMTLNELYYFWILLGFGYALVYTRNSYRNKVDEISEY >gi|292596540|gb|ADCV01000008.1| GENE 27 63263 - 63355 107 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRMEWLDSLKGFAIFLVVVGHVNRNCILVI >gi|292596540|gb|ADCV01000008.1| GENE 28 63352 - 64452 1208 366 aa, chain - ## HITS:1 COG:glf KEGG:ns NR:ns ## COG: glf COG0562 # Protein_GI_number: 16129976 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Escherichia coli K12 # 3 357 2 357 367 455 62.0 1e-128 MKYDYLVVGAGPFGAVFAHEAHKRGKSVLVIDRRNHIAGNLYCESKDDINIHVYGAHIFH TSLKHVWDYVNQFAEFNHYVNSPVANYKGEMYNLPFNMNTFSKMWNIRTPKEAQDIITKQ RAAISGEPKNLEEQAISLVGTDIYEKLIKGYTEKQWGRKCTELPAFIIKRLPVRYTYDNN YFNDRFQGIPMGGYTKMIERMLEGIEVRLGVDFLKHRNEYESLADKIIYTGPIDEYFGYS EGILEYRGLRFETERLEEENHQGVAVVNYTEGEIPYTRIIEHKHFEFGTQPVTYVTKEYP KDWKIGEEAYYPVNDVKNLDLYAKYVKKAETISNVIFGGRLGEYKYYDMDKVIASALALC NKEFQE >gi|292596540|gb|ADCV01000008.1| GENE 29 64452 - 65891 1255 479 aa, chain - ## HITS:1 COG:STM2082 KEGG:ns NR:ns ## COG: STM2082 COG2148 # Protein_GI_number: 16765412 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Salmonella typhimurium LT2 # 76 479 77 476 476 290 38.0 5e-78 MNRSICNNNNKKLFISKLIVLIADYIAIVLGILAAYYLRLNLSILPVSSNFKVEEIYVYG IVPIVFLTILLLNNVYSVVTPYWDTMKNLFRSITIGVVVSIVLMYTGHVINDVSRLFVAF AYICMLVFIFSERFIVGKLLSKAGYLTIPILLVGAGKTAELVQRSLERMPITTYKIIGYV DDNPKSSSIAKEYPCLGAFKDVESVIKDTGVQTVLICAPGLESKKLVSLINRLQVLVKRV AFVPELFGLPASNITARGMMEEQAVVLRVQNNLARKSNRVFKRIFDIVATVCGGFLILPI LGIIAILIYLDSPGSIVFGHKRVGQGGKSFSCYKFRSMVPNAQEALEQYLKDNPAAREEW ERDFKLKDDPRVTRIGKFLRKTSLDELPQLWNVLVGDMSLVGPRPIVRDEIVKYGDYIND FYLVPPGITGVWQVSGRSDTTYEERVLMDSWYVHNWSVWIDIVYLLKTVLAVAKSKGAY >gi|292596540|gb|ADCV01000008.1| GENE 30 66141 - 67334 769 397 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0020 NR:ns ## KEGG: Vpar_0020 # Name: not_defined # Def: O-antigen polymerase # Organism: V.parvula # Pathway: not_defined # 10 397 10 392 392 244 40.0 5e-63 MKSWILKNYEMILTVLISIMICTTRSSMAFGNFIYGLIVLVTLLTWWYKRDEVSIPNSIR QYGWAYLGMLLCILPSAFISDNIRVTTKYFFNIWIWKILIIVPILLFIKSSRKLYTILSI FFVYIGIDALSAFVQYLLGYNVGTEGRAGGVINGSMMGLAMLLTLAFSLALITVYDKTFP SYVKKSAVFSLFSIVLGMLGNQSRGSWLFNGINGVLITLRYSFVNIRYLLVLLVATIGIS FIFTSNQAYMARFESTFNVTTDGSNLGRIYVWESDRKMIMDHPVIGVGPGLWQKTYREQY KSEKETQDLGHSHNNMLQIASESGILGLIGFLGFSIFTIYKSVKSYIISTNPYDLSIIVG FISYLFLFGSIDYTWGNSSGIRIFWVVMGIMLQLRDN >gi|292596540|gb|ADCV01000008.1| GENE 31 67415 - 68353 956 312 aa, chain - ## HITS:1 COG:ybjX KEGG:ns NR:ns ## COG: ybjX COG2990 # Protein_GI_number: 16128845 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 10 312 44 329 330 87 27.0 4e-17 MGYLQTQWQRGRKIYGKRSWRETRRTFLHTMRSIRNKREIEALENYFANYTPDLTLLDRQ VGLFELMTRFFLFKSSTPQERLEAIVNHFDYLKDIFTDEAIREMYSVDPENIYDDVSRMN RGFIVWESEDLDMVARLYYGPGQRKEGFLTLLLTLGKQGVYHANFRFGKGFNGESAMWIG TIQGYKDGLDNAKIVTKKMFGYRPKNFIMFLLRHIAAICKVESIYAVSDEGFYANTHLVR GHRAKVAELDSLWEESGGVLCSDERFFKIPLEEYRKPIEEIKSQKRSQYRKRYELLDQYE QEIQEHMKNLIK >gi|292596540|gb|ADCV01000008.1| GENE 32 68395 - 69480 1004 361 aa, chain - ## HITS:1 COG:NMB1705 KEGG:ns NR:ns ## COG: NMB1705 COG0438 # Protein_GI_number: 15677553 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Neisseria meningitidis MC58 # 3 353 7 354 354 264 39.0 2e-70 MSIINIVGAKIWGGGEQYVYDICKQLQQRHRAAYTLVDQSNEEMQSRYAQVGHVMTANLY TLKGFLSVNAVAKQMKAQGINTIVCHSGKYILFCIALKQLTGAKLMFIKHNLVPGKIDMY HKWINSQVDAFVCVSKLVYDDLMTPIIKNTSKYYIVYNGIDPNRFLSFADNVPMKSKVTT FGYSARITERKGLYLILSALEQIHQNNPDIRLIISGAGTEDQIKKLKDYIDAHYMHSYAE FIGFTPDIEGLYRSIDCLLLPTVTREAFGLVICEAMYCGVPVITSGSGAQREIIDDGISG FIVDPLNEHTLQQAMEHVMSDAVDLSSIITNARRVVEERFIINRVADELVAIIDNLHSTN H >gi|292596540|gb|ADCV01000008.1| GENE 33 69586 - 71517 1388 643 aa, chain - ## HITS:1 COG:jhp0525 KEGG:ns NR:ns ## COG: jhp0525 COG1368 # Protein_GI_number: 15611592 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Helicobacter pylori J99 # 263 573 290 599 678 105 25.0 3e-22 MIIYNPYPTWKGRWKSALGSLRYGFWWGMDFDAYVFLLPLVLVTLPALWFEGYHQIEDSI RLVGLTMYSCVLYAAFAGKMIFYKHFHDTYNYMVHYGNHAEKRNLIDVFFNQDRGILVIL GLIPIAVISWFMGGFFLSLPSIPYPNIEGTWPTVAWNIGLVAASVLGFYWFRYGGTLSHD DKPEWDTIPTVVKEDIFFARATVPDLCALETVFKHPLRDEYTASPEDIDDAIHRIVPNKY KDSWQDLSTPLHAFKRVASSPRIDKPQHIFFIVGESIPQWSLDEPYKDLNICPGLWDFKD NPHTVQVPNFLPAGNVSRPSIVSLLSGVYDAGMEINEREAFWHEPLPTSLAAQMKRLGYD TIYWYGGNASYGNFNHFGKAQGFDRVESASVFCGPDAPKTWVGVYDHVFLENITEQIKGL DHPTFHFIYTTSNHGPYKMEDSLLDYDPEKVMPNLGDDLKSNKKRNKELATYRYSDKAIF NFVNAMKEAFPDSLFVVTGDHSNLFGSLNNTSLIQRDYTLRDTFCTVGLLQHPAFTKDVI TVPIGTHMSLMPTIIETIAPKGFEYYSIVPSLFDEQPETLVTPYQWITPHMMGDVRMDYG ESNIPSYKPVEPIRPIDNHGDDARDWTLLTMWLINHEDSMNKS >gi|292596540|gb|ADCV01000008.1| GENE 34 71675 - 72430 549 251 aa, chain - ## HITS:1 COG:NMA1958 KEGG:ns NR:ns ## COG: NMA1958 COG0463 # Protein_GI_number: 15794841 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Neisseria meningitidis Z2491 # 1 251 3 254 254 288 53.0 8e-78 MSTVTAIILARNEEQHIVDCIKSIQFADEILVIDDGSTDQTVSLATGLGAKVIPHPLNGD WSQQRRFGILQAQSEWILFVDSDERVSLELAKSIQRAIQGEPKAYWLRRYNLFHYNQATH GVVRPDKVLRLMPREGATVEGAVHEAFISPYPQDTLEGKLYHYTYDNWHQFFEKFNKYTT VAANKYKAQGKSCNFLGDIILRPTWAFFKIYILQGGILDGKIGFLLSIYHMMYTMTKYVK LYYLNKSNGQL >gi|292596540|gb|ADCV01000008.1| GENE 35 72488 - 74518 1627 676 aa, chain - ## HITS:1 COG:jhp0525 KEGG:ns NR:ns ## COG: jhp0525 COG1368 # Protein_GI_number: 15611592 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Helicobacter pylori J99 # 323 625 294 600 678 113 27.0 1e-24 MNRWQRLFEGIRTEIKVFIFFSALLTAFRIVFLAVFQSQLASVTMENILTSLWLGFRLSL KTVGSLCLLGFLGGTLVHTFVPKWPSLRIKQVLYSIATVLLTFLFLGRIPFYKIFNSSYN AMLINGKNDDIGAIVNTAINEYNALMYIIGAVVLSGALCWFLVRFLAWNTKKYSDYAVDL RNGDDADNVRNSDSADNRRLCTTWYPKTKKTQWMTGIALTVVIGVLGLFFRFGGAFSYTN SINWESAARLSSNLLNENILDDVQALYRVKSIAKRTAELEVINLTPQELNEKITAVGGKF NGINFDGSFTRTITTQRLADQPQSINLVLGESYGLWPFLAEYNDPGAYLVEQGRKYAASP HAMSTQLALAQGTGTMPAINGLLTGMPDTGLYPNYEGESFKEPYGLGIGPVMKKLGYKTV FWYGGFSTWQNVKNFVLSQGFDEFHDASEMPSEDGNAWGVGDKDLFKAISAYMDQHRGEK ILNVIMTTSNHPPYSINVAKEGYDVNKVKGHLPDSIEENDKQLNEMGHIWYADHVMGDFI AREETADPSALFVITGDHSERFNFAREVGPNVASTIPIIFYGRGIHKDWLAPNAFGMSIQ IIPTLAELVGRPGQTYEAMVPSLFTQEEFVFNHRLYLDKSGKVLEQSASMPQSYGDMIKN MRELAAWRIKHGDVIK >gi|292596540|gb|ADCV01000008.1| GENE 36 74710 - 74823 60 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVKESASAKKSAGAETIDRGCGKCKRCKGPKCKKYPK >gi|292596540|gb|ADCV01000008.1| GENE 37 74856 - 76034 1592 392 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0014 NR:ns ## KEGG: Vpar_0014 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 392 1 374 374 414 89.0 1e-114 MELIDTMLIERIRKALIKRYDRDQQIQQMIEEIGAEEGLNETELSIVYQAYLEVKERVYY TSSLVDLWNQIEDVQKRMSLLHSYESLEEDLFGDVLGDDKEDIVISNTSELGKGASYNDD AYAMEQVQLSDVPVHHDSTVGMNHIKLNELKSIGGLFTGFGESSGKEMADFEDTAIEHLD VKPLEGVESLAIHHLDEDEALDVDGLDELSKHKKSEEAKVDDEDMSSIDPYTAVNALLFG KAGLESDKTNKKMEKLLKKKLKRVDDEWARINGSEDKKTKGDKKSKEDKTSKEDKKSKED KKSKGEKKSKKDKKSKEDKKEKKHKKSKEEKRSKDEEKLKKKKDKAEKKLKVLNDKLKTV FLADTFKKKDKKKDKKKDKKSKKDESAKKQNR >gi|292596540|gb|ADCV01000008.1| GENE 38 76373 - 76972 689 199 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0013 NR:ns ## KEGG: Vpar_0013 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 199 1 199 199 385 94.0 1e-106 MATEQEWESVLQIKTSGRDDSRSDTEHHPYEPTDYCVLERLANSGHIRKKNTLIDYGSGK GRVSIFMAYQTGCHSIGIEYDERLYEKALINGESPAARNRVSFVLGDAALYKLPDQSDRC FFFNPFALHTIKRVLGNIFDSLYHNPREIKLFFYYVNEEVENFLNNHVRLEQEEPIDCSD LFEASDAKERILVYSVNLF >gi|292596540|gb|ADCV01000008.1| GENE 39 77228 - 78583 1976 451 aa, chain + ## HITS:1 COG:alr5216 KEGG:ns NR:ns ## COG: alr5216 COG1253 # Protein_GI_number: 17232708 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Nostoc sp. PCC 7120 # 3 438 2 428 442 343 44.0 3e-94 MDSDLTLDFIIIIVLIIANGLFSMTELAIVNAKKRKLEELAEAGNERAKKAFELAEHPNE MFSTIQIGITLVGILTGLYSGATFSGPLEEILVSNIPSIEPYAASVSSFIIVAIITYLSL VIGELVPKRLALNSPESIAVVVAKPIYWLSVALKPIVSFLGVSTEFLLKILGVTVKEEAP VTESEINKMLTEGVAMGAYEEEEPILVENIFHLADMNAGDIMTPRTQLKWIDLNGMEDEI MEVLKNANHYRIPVGTDSLDELKGLVTVSDVLVQIMQRPSESSIHDIIKACLKEPVLVPE SISLMKLLNVLRTEGVHEAIILDEYGGFTGLVTLHDIMEEIVGLMPSGEEEIKEEENKII ERDGAWLVDGLLNVDEFKEFFHIDQELPGEEDDLYKTMGGLLNVLFGRIPKELDKAKWNG YTFEVIDMDHTRIDKILVTYEEPIVEQEEEK >gi|292596540|gb|ADCV01000008.1| GENE 40 79012 - 80076 1439 354 aa, chain + ## HITS:1 COG:PA3677 KEGG:ns NR:ns ## COG: PA3677 COG0845 # Protein_GI_number: 15598873 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 42 352 40 351 367 186 31.0 5e-47 MNQRIIATIGALLIGTAIISGCGSEKPPEDTSLKVRTITIGEESGTTDAGYAGTIHNKTE TNLAFQIGGRVINKFVNVGDTVQAGQVIAQINGSDTSAQVQNAEGAVKAAQSAYELAETN AKRYRELYAQQAISKLQLDQAENQLNATSAQLQQAQASLNLSSNQNSYTNLTAPDTGIIT AFNIEAGQVVAAGQSVGTLAAGHDPEAVIALPEQELSKIHVGSPATITFWALPDVTVQGV VREISPVPDPVARTYTVKITLQNAPKEVQLGMTVNANLSTTDSTNISIPLTALVKDSNGN NAVYIIRDKKAHLVPIKTGEFGKNSVIVTSGLAKGDIVITAGTQQLQEGTAVSQ >gi|292596540|gb|ADCV01000008.1| GENE 41 80073 - 83135 3044 1020 aa, chain + ## HITS:1 COG:PA3676 KEGG:ns NR:ns ## COG: PA3676 COG0841 # Protein_GI_number: 15598872 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 4 1020 3 1019 1025 808 42.0 0 MKQFNLAEWALKHKSIIYYFMAVLLTFGIFSFTHMGRMEDPDFTMRTMVVGVAWPGASPQ EMSDQVTDKLEEKLRDLPGVDYTKSFTDGSKSVIYINLREDLPSDKIRPAWEEARNMIND EWKSLPAGVQGPTINDRFDDVYGIIYAISGDEYSYEEKRQQAEDLKRQLLSVPNVKKISL IGVQQQTLNVTINKDKLASYKVSTQQLLTALKQQSMMVPAGVITTDTNNVYLRVNGLFDS PQAVRDMPIRINNQTLRLGDMADVTMTYQDPSDPQFYYKGKPAIGIAISMDAGANNIEFG EAIDKKLEELQKTIPAGLELNQVSNQPHIVKESIGDFSQSLFEAIAIVLLVSFASLGLRT GIVVALTIPVVVSTTFILMYESGIYLHKVSLGALILALGLLVDDAIIVVEMMSVKLEEGW GHFKSATFAYQSTAFPMLSGTLITCAGFLPLALAQGMVAEFTKSLSIVVFMALILSWFAS VLVSPVLGYKIIENKAPKPESEWTKRDRIMHKLNVTFYDKFEKLLHWALGHHKVVLLATL GAFVLSLLSLPLIKQEFFPSSTRNEIIISMQFPQSSSIEYTANQAKLIDEHLKDDERIAT FTSYIGQGSPRFVLTLEPELQRNNFLQYVIVTKSLEDRDKLYAELTPYLNEQFPSALVNT QFLQIGPPSKYPVMLRVAGPDQKVVKEIANQVKAKMQDDKDLQNIAFDWPDTEPVANIHI DPNKARLLGIDSYAVSLHLQSLLSGTKSGEYYEGNQTIPVTFRLGDNEQHNLSALSSLPI QTGNGSYVPLSQIATIAMTQEDGIIWHRNMMPTISVHANVKTGIFGNAKTKEIYKSLQDI RNSLPTGYSIDLDGAAEKSETAVQKLLTPMPIMLFVIMTILMFQLKRIALMIMALLTAPL GLIGVVLALNITRTPLGFMAILGIIALSGMIIRNSIILLDQIEIHKAEGQKPRESIINSA TLRFRPIMLTAIAAILGMIPLMGSVFWSPLAIAFSGGLLVATVLTLIVLPVMYASWYKVK >gi|292596540|gb|ADCV01000008.1| GENE 42 83307 - 83624 479 105 aa, chain - ## HITS:1 COG:lin0240 KEGG:ns NR:ns ## COG: lin0240 COG0393 # Protein_GI_number: 16799317 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 105 1 105 110 117 58.0 7e-27 MIITTTMHIENKPVQEYKGIVFGEVVEGRNFVKDFMSGIRDIVGGRSGSYEDSLMNARKA ALDEMSQRASKLGANAIIGVSFQYSTVGAQNGMLMITCNGTAVVV >gi|292596540|gb|ADCV01000008.1| GENE 43 83831 - 85312 1918 493 aa, chain - ## HITS:1 COG:YPO1309 KEGG:ns NR:ns ## COG: YPO1309 COG0833 # Protein_GI_number: 16121591 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Yersinia pestis # 17 489 15 489 503 575 59.0 1e-164 MSENHNSNVEFTSNKDQHLKRSLKARHMNMIALGGAIGTGLFVAGGEVVSTAGPGGALVA YGLIGIMVYFLMTSLGEMATYLPIPGSFGTYAKRYVDPAFGFALGWNYWFNWAITLAAEV LAGALIMKYWFPDVPAIVWSALFLFILFGLNYLSTRFFGESEYVFSSIKVITVFVFLFCG FMLIFGIGGTSPGFANWTVGEAPFVGGWESILAIFMVAGFSFQGTELIGVAAGEAEDPEK NVPKAINTIFWRILLFYIGAFTVIGFLIPYTDPNLLNSSVENVSISPFTLVFDRFGFAFA ASFINAIILTAVLSAGNSGLYSSTRMLYALAKEGQAPQIFAKLNKRGVPVPALILTTAIG LFAFLTSFIGEGTAYTWIVNISGLCGFIAWVGIAVSHYRFRRAFIAQGRDLSELPYKAWL FPVGPILAFILCVIIICGQNYSAFTGDTIDWYGVSVAYIGLPIFFAVYFGYKYINKTKVV PLKEVNLDRDFDR >gi|292596540|gb|ADCV01000008.1| GENE 44 85323 - 87224 2498 633 aa, chain - ## HITS:1 COG:MA1584 KEGG:ns NR:ns ## COG: MA1584 COG0187 # Protein_GI_number: 20090442 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Methanosarcina acetivorans str.C2A # 3 633 4 634 634 816 64.0 0 MPEQNYGAQNIQVLEGLDAVRKRPGMYIGSTSARGLHHLVYEVVDNSVDEALAGYATHIE VSINPDNSVTVVDDGRGIPTGMHESGMSAVELVLTKLHAGGKFGGGGYKVSGGLHGVGIS VVNALSEWTKVQVSQNGIVQEISFARGHKTSELHEIGKAEGTGTTVIFKPDAEIFETTVF SFDTLKMRLQELAFLNKGLRITLSDLRLEEPRVESFHYEGGLVSFITFLNENKEAINPTV INIENTKDDVVVDVALQYNDSYSENLLSFVNNINTIDGGTHLSGFRAALTRTLNDYGRKS GLIKENESNLSGEDVREGLTAVVSVKVLEPQFEGQTKTKLGNSEVKGITDVIVTEGLKTF FEEHPQDAKKIIEKATMASRAREAARKARDLTRRKNALEVSSLPGKLADCSEKDTSMTEI YLVEGDSAGGSAKQGRDRRYQAILPLRGKILNVEKARLDKILANNEIRSMITAFGTGIGD EFDITKSRYNKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVEEGHIYIAQPPLYQIKKGK SHWYVYSDAELTAKLDEVGRDGTTIQRYKGLGEMNPEQLWETTMNPDNRTILQVSLEDSI EADKIFTVLMGDKVEPRRKFIEDNAKYVRNLDL >gi|292596540|gb|ADCV01000008.1| GENE 45 87302 - 87550 181 82 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0006 NR:ns ## KEGG: Vpar_0006 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 82 1 82 82 139 97.0 4e-32 MYVHIGDTISVPIESIITMVHAKGGKSHKSPIHHYETLEYIAMVPEEQIKTYVVTDDCVY GSGISIKTLMRRIDEFYSIIKR >gi|292596540|gb|ADCV01000008.1| GENE 46 87564 - 88466 671 300 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0005 NR:ns ## KEGG: Vpar_0005 # Name: not_defined # Def: protein of unknown function DUF721 # Organism: V.parvula # Pathway: not_defined # 1 300 1 300 300 546 95.0 1e-154 MDSLDLCLPKALAELNLLEQYKLNTLVHKWSDVVGDVIADHTKIVSIKPPNMVISADNSM WMQELQMQKRRIIEAINKYYRQDVITDIRFIMKRQSYVKVENNTSLTIPDEQIITKRINF ADIVLSKEDVDAIDTSLKQTDNEALKAAFRKVQITARKREIYLEQHGYHRCKRCGMHMKS KKEICPTCEYELHRKHIKEIKAVIRKYPYFKYSDCQQFIQCSFSDFAEAMRESIYFYLDK IYKGSINRRHMFMVAMLITHKKPDELTDQHVINLCNKYRSKFLAEEEQRKIDALNGTLEK >gi|292596540|gb|ADCV01000008.1| GENE 47 88453 - 89553 759 366 aa, chain - ## HITS:1 COG:BH0004 KEGG:ns NR:ns ## COG: BH0004 COG1195 # Protein_GI_number: 15612567 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Bacillus halodurans # 1 362 1 368 371 260 41.0 2e-69 MRIDSLQLFQFRNYKDVQIQFNPEIIVLHGTNGAGKTNILESIYVGTIGKSHRTNDTSDM LMFNAEEAGIVVKFEKKDTPQKVNIKLFRQGPKDIRLNDTKISQKELIGTLNTVIFCPED LQLIKGTPSGRRRFLDMEISQTSATYYHQLMQYNRLLQQRNAVLKEYRGKNTIPLEEWDL QLADMASFIVKKRLESLKKINLLIDLMNRKLTGGLENLTIGYEQPYMDNGSLEYTKEGFY ERIKAALPQDRHRLSTSVGPHRDDLRFFSDAMDLKKFGSQGQQRTAVLSLKLSELEFIKS EVGEYPVLLLDDVLSELDESRRTNLLQFIHKRIQTFITTTDIHDFKDLKSVQFISCEGGQ VQYGQP >gi|292596540|gb|ADCV01000008.1| GENE 48 89557 - 89790 370 77 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0003 NR:ns ## KEGG: Vpar_0003 # Name: not_defined # Def: RNA-binding S4 domain protein # Organism: V.parvula # Pathway: not_defined # 1 77 1 77 77 120 97.0 1e-26 MKEQQQVPIHTEYIQIDQLLKLEGIIETGGQIKSFIDEGNLTLNGQVVTEKRKKCRVGDV ISCEGLDVDLIITQEEA >gi|292596540|gb|ADCV01000008.1| GENE 49 90044 - 91156 1296 370 aa, chain - ## HITS:1 COG:CAC0002 KEGG:ns NR:ns ## COG: CAC0002 COG0592 # Protein_GI_number: 15893300 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Clostridium acetobutylicum # 1 367 1 362 366 204 33.0 2e-52 MHITFPKANLQKAINVLQKVSQNKTSSNLPGAIYITTKNGQVELQGNDFELGIRLTIDGD IKEPGTLVVGSRYFQELIRKLPGDTIELYKPEDGNSLTITSGSSEFNLVTLHPDDFSLVE QIHDQDHVNIDSFAMKELIDLTNYAAATDEDRPVFTGALLEIKENEVTMVATDTHRMAVK KITIDEPATTPMRAIIPTKTLAEVSRLLPTDNPAMINIIWNRTQIVFNFESIYIISRLIE GTYPEYEKVIPSQFDSSAVIDRREFAGAVDRVSLLAKDISYNVIRYDWSESNVILSTQNT EIGMAKEDVAVEFKGTPFTISFNGRYISDILRHSTGDNIHLFLKQNGPVVIRQDNNPNYT YVVTPVRTNA >gi|292596540|gb|ADCV01000008.1| GENE 50 91565 - 93139 1558 524 aa, chain - ## HITS:1 COG:CAC0001 KEGG:ns NR:ns ## COG: CAC0001 COG0593 # Protein_GI_number: 15893299 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Clostridium acetobutylicum # 168 521 97 444 446 300 43.0 4e-81 MQSFDLNNIWEHILQEAKKNMQHLPDALYLRVTSSLIPMALESHSIHIGVMQTFVKNLID QQPQISKALQDAITTVIGSHRDMVLFDFNQESVDTTFVDESLIDTSVVAPPMPLPPIVEE KAHQEEFYTPVYQDPVYIDRAPAPVDIPDEPMIATPKKPTETMPTLQSDNVPVDLSLSNL NPAYRFDNYVTGNANRIPFGAAQNVAEFPGGDYNPLFIYGPSGLGKTHLMHAIGNAIKEN HPHMKVMSITSENFMNIFVETLQRNQGKLFRNTFRNIDVLMIDDIQFLESRESTKTELFN TFNELLNNNKQIVLTSDTMPNDMEQFEDRLRSRFQAGYIATMENPDLETRIAIFRSLLER EYKKNRIIRIDNDSINYVALQFSENVRVLQGAFTKLIGTASIDQRLESIDLEYTKHALAG LVHTEEVNIVNIESIQNFVSSYFNIKKQDLLGKKRKAQFAFPRQIAMYLCRDMINESYPQ IAAAFSRDHTTILHAYDKITKEIEKNEETKRMVAEIKQKLTTCG >gi|292596540|gb|ADCV01000008.1| GENE 51 94342 - 94476 230 44 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371631|ref|ZP_03855114.1| LSU ribosomal protein L34P [Veillonella parvula DSM 2008] # 1 44 1 44 44 93 100 1e-17 MKRTYQPNTLWRKRTHGFRERMKTIGGRLVLKRRRAKGRKRLSA >gi|292596540|gb|ADCV01000008.1| GENE 52 94556 - 94915 342 119 aa, chain + ## HITS:1 COG:CAC3738 KEGG:ns NR:ns ## COG: CAC3738 COG0594 # Protein_GI_number: 15896969 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Clostridium acetobutylicum # 7 119 2 116 119 65 37.0 2e-11 MDYCLDKARRLTHNNEYRLVYKHGKYEVGRMCVLYRMPVAKQPTRIGFVTGKKVGCAVER NRARRLMKEVYRLNQHAIREGYHIVIVGRGPLKNATYEKAEKEILYLLRKSKLLIQNDK >gi|292596540|gb|ADCV01000008.1| GENE 53 95354 - 96019 838 221 aa, chain + ## HITS:1 COG:HI1001 KEGG:ns NR:ns ## COG: HI1001 COG0706 # Protein_GI_number: 16272937 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Haemophilus influenzae # 33 221 349 534 541 158 44.0 6e-39 MDFLSGIFQPIVDLMSTLVTYAFQLTQMIGYPSYGVAIILLTIVIKAILAPLTVKQIKSM KAMQELQPRMKQLQDKYKNDPAKLQAEMGALYKEMGVNPLAGCLPLLVQMPFLIAIYWAL KDYPYDPNFVQFLWLPSLGDPDPMYILPILSALSTWVMSRQTSNGATGAAAQQQKIMTIF MPLFIGYISLSFPSGLVIYWVVSNVFQLIQQHFIYKNLNAK >gi|292596540|gb|ADCV01000008.1| GENE 54 96029 - 96826 1136 265 aa, chain + ## HITS:1 COG:lin2985 KEGG:ns NR:ns ## COG: lin2985 COG1847 # Protein_GI_number: 16802043 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Listeria innocua # 62 261 5 201 206 125 39.0 9e-29 MEFIDVSAKTIEDAIAKGVAQLAAEGQELVETKVLEQPSSGFLGIGRKPAVVRLFFTALA QSATAKEVANAEEQSVAIASEPVATSETEVQDTAIETSESTVTEKPSKKELSKEDQQEIA EKGKQFLDDMFTQMGLTVVIEKMMTKDKITFQVHGEDLGILIGKHGQTLDAIQYLTNLVA HKDVSGHCHIVVDVENYRSRREETLVNLAKRLASKVKRNRQKVSLEPMNAFERKIIHTAL QGDKNVVTNSEGDEPFRHVVISYKK >gi|292596540|gb|ADCV01000008.1| GENE 55 97016 - 98401 1447 461 aa, chain + ## HITS:1 COG:BS_thdF KEGG:ns NR:ns ## COG: BS_thdF COG0486 # Protein_GI_number: 16081154 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 5 461 2 459 459 418 46.0 1e-116 MYIDDTIAAIATPPGIGGVGIIRVSGKDSFPIVNSLFKSTGTVPLMDRQNRTIQYGTIVD PMTNKTIDEVLVLLMKGPHSYTAEDVVEIQCHGGIVPVRQILKLLVNHNVRMAEAGEFTK RAFMNGRIDLTQAEAIIDIIEAKTEDSLSLAVSQLDGTVSSFVKDVREQLIAMIAHLEVT IDYPEEDIEDVTSQEVRDQLQPILKAMEDLLSTANTGRLIRDGITTVIVGCPNAGKSSLM NALLRENRAIVTDIPGTTRDSIEEYMTVEGISLRLIDTAGIRDTQDTVEALGVERARDYI NKADIVLCVIDGSTPLNPEEIEILTSVSGLNTIVLLNKSDVAQVVTDENIKEHGNFTAIE RISAKEGEGSAVLSKWVQELVYGGRVKQDNRAMISNVRHISLMEQAKAQVEQALSSIDMG MPVDFVATDLRSAWELLGDITGDTIRESMIDELFSRFCLGK >gi|292596540|gb|ADCV01000008.1| GENE 56 98452 - 100323 2106 623 aa, chain + ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 2 623 4 626 626 752 57.0 0 MYTVDNYDVIVIGGGHAGCEAALATARMGHRTLMATISLDNIALMPCNPAVGGPGKSHLV YEVDALGGQMGINADATAIQMRMLNMGKGPAVHSLRCQSDKIKYQHLMKQTLENTDNLNV KQIMVTELKVEDGKVTGIVTELGEFYGAKAIILCTGTYLKGKILIGDIDYVGGPNGQRVA EHFSQSLLDNGIELMRFKTGTPARVDKRTLNLDNMVVQEGDAHHHAFSFMDEWINRNEDV CWLTYTNKETHEIIHSNIHRAPMYSGKIEGVGPRYCPSIEDKVVRFADKERHQLFVEPEG TGTNEMYVQGMSTSLPMDVQYAFLRTIPGLENVEIMRPAYAIEYDCLNPTQLTPALQVKH IEGLYSAGQANGTSGYEEAAAQGLMAGINAALWLEGKEPFILARSEAYIGVLIDDLVTKG TNEPYRMMTSRSEYRLLLRQDNADMRLTEKGREISLVKDDRWAKFTAKKAAIEEAMDMLR NTPVNPSKETQALLESLGTASIKTGIHAYDLVKRNELSYAIVADAFGLKRYTPDVEEAVD ISITYEGYIKKQMEQVDKVRKLEEKILPKEWDYAQIKGISLEAQQKLNKIRPHSIGQASR ISGVSPADVSVLLIQLEQYNRSK >gi|292596540|gb|ADCV01000008.1| GENE 57 100443 - 101195 602 250 aa, chain + ## HITS:1 COG:CAC3732 KEGG:ns NR:ns ## COG: CAC3732 COG0357 # Protein_GI_number: 15896963 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Clostridium acetobutylicum # 14 250 2 239 239 196 43.0 4e-50 MKEKYDVPIAPLSEFVSYMMEQMSHFGLPCTEEQAKDFYLYYVHMIETNKYLNLTGITDM KEVVIKHMIDSLSCYNSEIIKFGMSIIDVGTGAGFPGIPLAIYDRSLKVTLFDSLKKRLN FLESVIDELKLTNCTTLHGRAEDLSHQDYRESFDIATSRAVARLPILLEWTVPYVKEGGY VVALKGAIYEEEVKESNKALSTLKATIEEVRTVALPTLEDKRAIVYIKKIGKTPKQYPRK PKEIKDKPLV >gi|292596540|gb|ADCV01000008.1| GENE 58 101495 - 102352 1167 285 aa, chain - ## HITS:1 COG:MA3514 KEGG:ns NR:ns ## COG: MA3514 COG0685 # Protein_GI_number: 20092322 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Methanosarcina acetivorans str.C2A # 3 272 5 274 292 216 43.0 3e-56 MTLKEKHQQGQFTITVELDPPKSSSAEKTFEQAARLKGNVDAINIADSPMSKMRMSPISL SYLLQHNKEIETIFHLTCRDRNIIGLQSELLGAAALGVHNILTLTGDKPDNGDHPFAQSV FEVDCMGLLNIAKTLNAGKDLAGNDLDAPTNFYIGATGNPGAPDLEIERQKLAAKIQNGA HFVQTQPIYDLEQAKRYIDKMSEFDVPIMLGLIPLKSFKMATYLHEKVPGINLTQEILDR MEKGGKEAGTEIAIETLEQIKKIAAGVHIMPLNDIDTTLYIIDHV >gi|292596540|gb|ADCV01000008.1| GENE 59 102374 - 104809 3007 811 aa, chain - ## HITS:1 COG:TM0268_1 KEGG:ns NR:ns ## COG: TM0268_1 COG0646 # Protein_GI_number: 15643038 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I (cobalamin-dependent), methyltransferase domain # Organism: Thermotoga maritima # 3 280 17 281 285 210 40.0 8e-54 MYIFDGAMGTMLQAAGLEEGYCPELFNIERPEVVKDIHAQYLQHGSDVITTNTFGACGLK LEDYDLQDRVREINIAAVKVAKEAIAETKPTARVAGSMGPTGRFLQPLGNMSFDSIYDTY REQAEALIEGGVDFIIIETIIDVQEMRAALLASLDAREAAGKTKDDVQIICQFSFSEDGR TITGTPPAVATTIVEAIGADIIGINCSLGPEQITPLIEEIASVTNLPISCQPNAGMPQLI NKQTVFPLSAEEMGPLMLPIVDAGASYVGGCCGTTPAHIQSISDAVKAHTPKERAHIAPK TIITSRTKLLELGHHTKPLIIGERINPTGRKVLAQELRDGSFIRVKRDALDQVEAGADIL DVNMGVAGMDQSPLMERAIFELSMLVETPLSIDTLDPVAMEIALKNYPGRALINSVNGEE ESITHVMPLAKRYGAALLCLPICSGDLPEKAEDRVALAESIVNRAYGYGLKPHDLLLDPL VLTLASGEDSARQTLRTLQLYKEKFGFPTVMGLSNISFGMPQRPYLNGQFLTMALACGLT TPIMNPLNYPAKKAFVSSTTLLGWDPGSAEFIKEYGYEDETTAPGNSAPKGPDKKSFDSN DPLANIRACVEQGEKEAIIDLVKKALADGIDPLDLTKKGLSEAMNVVGDKFGSGKLFLPQ VMLAAETMQAAFNTIKEIIPASESLDKGTVVVATVKGDIHDLGKNIVAALLENNGYKIVD LGKDVDPEVIVQAIKDNKAALVGICSLMTTTMPQIDNTIAAIRAAGLKTKVMVGGAVVSQ DYADQAGADIYAKDGIAAVNHANDFFETLEK >gi|292596540|gb|ADCV01000008.1| GENE 60 104857 - 105624 977 255 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1849 NR:ns ## KEGG: Vpar_1849 # Name: not_defined # Def: vitamin B12 dependent methionine synthase activation region # Organism: V.parvula # Pathway: not_defined # 1 255 1 255 255 483 96.0 1e-135 MPIYNGMLPAIDKAEVKRYAGLRHAEDFPQNYVDEACKEIQLLATPRGVYQEYDYDAETK TILSNPPLKIEGSIIEKHLEKSTKVYVLGVTVGEDVEIRSEQLFKQGNYTVGLLLDAAAT TAVEQVADQVNEVINTIAKKQGYKPTWRFSPGYGNWPLEIQPQLAKIIKTEMIGLQVTEN YLLFPRKSVTAIIGLMPANEDIKTKRGCTSCSQQNCASRKLPEKATVNTQDGGEEEGSKT TADISGIAMKGQPIQ >gi|292596540|gb|ADCV01000008.1| GENE 61 106553 - 107323 870 256 aa, chain + ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 1 249 1 249 253 345 70.0 5e-95 MGKVIAITNQKGGVGKTTTSVNLSACLADAGKQVLLVDLDPQGNASSGLGIEKDDLELCV HDVLIDGEPIADIVQPTMLENLFVAPATIQLAGAEVELVSVVSRETMLKKALASVRDTYD FIVIDCPPSLGLLTLNAFTAADSVLIPIQSEFYALEGVSQLVKTITIVQQTSNKDLEIEG VLLTMFDGRTNLSIQVADEVKKFFGNKVYKTIIPRNVRLSEAPSYGEPIIVYDPKSKGAD VYTKLAKEVIKASKTK >gi|292596540|gb|ADCV01000008.1| GENE 62 107503 - 108432 1010 309 aa, chain + ## HITS:1 COG:BS_spo0J KEGG:ns NR:ns ## COG: BS_spo0J COG1475 # Protein_GI_number: 16081148 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 12 297 2 281 282 182 41.0 7e-46 MPREIKSKKSKASGLGKGLENLMKVDSVESVLPDKEIHELPISELVPNVDQPRKSFDEDS LATLAESIKNLGIFQPIVVRKQKNKYQIVAGERRYRAAMIAGLKTVPVIVKKYNTEEMTE VALVENLQREGLDPIEEALAYQGLMDTYKQTQEMISARLGRSRSYIANMVRLLKLCDSVQ KDLIEGDLTVGQARPLLALRSAAQQMEAAERIKEGELSARQAETLVKSMQNKSSKAKTGK PQNTAEVRALMDRLKLSLGSPVNIKFRAGKKVQGKIEIAFSSEAELERLIAYMDGQDQTE DAETIEFRV >gi|292596540|gb|ADCV01000008.1| GENE 63 108433 - 108696 225 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167033380|ref|YP_001668611.1| putative ribosomal protein S1 [Pseudomonas putida GB-1] # 1 80 49 131 139 91 63 5e-17 MASKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSKSNSNSNSRNTNN NSNDNNNNNNNSYSNCNSRNSNNNNLR >gi|292596540|gb|ADCV01000008.1| GENE 64 108835 - 110121 1167 428 aa, chain + ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 1 422 4 398 411 334 43.0 2e-91 MEQTPKANRIHIGFFGRCNAGKSTLINMLTGQPVSLVSDVAGTTTDPVSKAMEILPLGPV VITDTAGIDDTTELGTLRMEKTEEVVKKINLAVYVLRTDEEPTSDDMHWLGLLKQNNVPV ALFINEINATTNNLDGSKDSVDASKDSVGNDILGDQYITAHTGLSDLVTVIGSADFTSDA KRLELLDLLGGLTPLDVEGEQTLLQGLVEEGDTIILVCPIDSAAPKGRLILPQVQTIREI LDHKGLALVCQTEELPAMIHSLKNPPKMVICDSQAFDRVDELTPDSIPLTSFSILMARFK GKLQDLVTGVKAIKNLKAGSKVLISEGCTHRRQCDDIGTVKIPNLLKKQGYADLQLEFTS GGAFPKDVSQYDLIIHCGACMLTRREVLRRIECAVVQGTPIVNYGVLIAALHGILERAIS PFVDELEG >gi|292596540|gb|ADCV01000008.1| GENE 65 110338 - 110859 663 173 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1845 NR:ns ## KEGG: Vpar_1845 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 173 1 173 173 314 99.0 1e-84 MFESIQPWIGMVTIVLVIVLFVYCVILHIRLGSLKKKYDFFMQGEHGASLERKLSVEVSE IRDAAKGLESLLSEQVAIRNIQSNTIQKIGFIKYNAFENIGNDLSFALTLLDGNNNGICI SSIYGRSESRIFSKPIVKGKSLVSLSQEELESLNEALGERTNEEALTSAIVSK >gi|292596540|gb|ADCV01000008.1| GENE 66 110869 - 111825 1116 318 aa, chain + ## HITS:1 COG:AGc3364 KEGG:ns NR:ns ## COG: AGc3364 COG0739 # Protein_GI_number: 15889135 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 192 314 300 421 432 127 56.0 4e-29 MLKIPAFISNKVERNGDNCILTLTTKQAKLVAIIGSVVLVLALVLGIWGIVRQAEVVQLR QQTQLQSEQLKLLQQKTEVLDKKIQNLNQISEENKQMLKGAESGTPAQGGGDGSDPKQEA ADNSEAQTLTAAQLSARLSKMDKEAQKLLVSFYTMRNILRDGGAQDLMALQSINFSAGSG GAVNSTTPSIWPSKGVITSPFGSRVDPVTGAIGAFHEGIDIADDYGSQIVATAAGVVTFA GYTSGGYGNLVEIDHGNGFVTRYGHNSAVLVTVGMSVKQGQTIALMGSTGKSTGAHVHYE VRLNNTPVDPMIFLPISN >gi|292596540|gb|ADCV01000008.1| GENE 67 111998 - 112576 811 192 aa, chain + ## HITS:1 COG:Ta1121 KEGG:ns NR:ns ## COG: Ta1121 COG2109 # Protein_GI_number: 16082143 # Func_class: H Coenzyme transport and metabolism # Function: ATP:corrinoid adenosyltransferase # Organism: Thermoplasma acidophilum # 5 191 10 196 197 154 41.0 1e-37 MKAYVQVYTGEGKGKTTAAIGLAIRAIGAGKKVLFLQFMKSKVYSEHTILPTLTNLTLET VGKPFFIIKEGMKSKDELAKWGDEVVVFESGNPPKDYVALIEKGYERALAAISSGEYDLV VLDEYNMALFFELITWDKTKALLDARHPETELVFTGRGAPQELIDEADLVTEMKEIKHYY LQGVMARKGIEN >gi|292596540|gb|ADCV01000008.1| GENE 68 112606 - 113745 976 379 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1842 NR:ns ## KEGG: Vpar_1842 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 21 379 21 377 377 699 96.0 0 MSTVAIVALVIVAIIVALILTILLAPITYSIEIDGRTPYRGELRIKWLWRVFSLHLAYIQ NKPFFKELYVLGVLKIGPVKDYEQWLENRVDEEYQKVMDDDGDISQAEAFAKAMQGGGQG PTASSSGTSFDDLKSAQGSNTIFDDDESPGAGSSPSPKERIERPDAVSKDMDAQARAERY DSIQQDPTAHIQDDDEVISHVTFNSDGSIKEKVFTKVNDIKTTVKQRFGKPDPNDPVASF KSEIPTFWFMKHLRNTELWRQIFLVSKRCYNHSKPRDMAIEGRFGIGDPYRMGLIASMLY SIWPEQAESIEIDYVNRVAEGSGHIKGRMILAVLAWYGTRFLVSKPMRSLLGESARVFWV KRKEAKQLEKLKAAQGQTA >gi|292596540|gb|ADCV01000008.1| GENE 69 113823 - 114200 338 125 aa, chain + ## HITS:1 COG:CAC3264 KEGG:ns NR:ns ## COG: CAC3264 COG3874 # Protein_GI_number: 15896509 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 116 9 119 133 67 42.0 5e-12 MENSNVKENLEVLFEKFKNMIKVETVVGEAVQIGDTTLVPFVDVTFGFGTGTNHCTANKS QESGGGGGGAKMEPSAILVIKGDRIELFNIKGNPYSSSFDRLIGLVPDLVSKLKSDKYIY LNDEQ >gi|292596540|gb|ADCV01000008.1| GENE 70 114481 - 114939 756 152 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1840 NR:ns ## KEGG: Vpar_1840 # Name: not_defined # Def: outer membrane chaperone Skp (OmpH) # Organism: V.parvula # Pathway: not_defined # 1 152 1 152 152 219 100.0 2e-56 MKLSKKLTTLAIVGAMSATAAVASAANIGLVNMSQVVNSYPGYGALDMKMQQVDAQYRPQ IEKKVQEIEKIKDSAQAEAEFNKTVAPLLQKENEEINKIAQPMMQAIHNTVEAIRVEKQM DVVLDDPYTIRAADANSKIENITNEVISRLKK >gi|292596540|gb|ADCV01000008.1| GENE 71 115048 - 115569 497 173 aa, chain + ## HITS:1 COG:CAC2508 KEGG:ns NR:ns ## COG: CAC2508 COG0778 # Protein_GI_number: 15895773 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 3 173 2 172 182 183 50.0 1e-46 MKDFKALATERYSVRKFDTRPVEQEKVDILLEVARLAPTAHNYQPQRLLVLNTEESLNKL KGCTNGHFNAPLAIIVCYDNTVSWKREYDDEDLGVVDASIVGSHIMFTAADIGLGTTWIA HFDPAKVRKAYNLPDNIIPVAIFPIGYPHPDCVPAPGHTKRFDVGEFTIYNSF >gi|292596540|gb|ADCV01000008.1| GENE 72 115733 - 116020 516 95 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1838 NR:ns ## KEGG: Vpar_1838 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 95 1 95 95 165 98.0 5e-40 MAGTVNQELGLLFQGPNYVIVKKGGKAGEKVEKHNHPEANVIFTVVKGKVQVFLNETEEH VLVPGQVLEFNGDNYIQATLVEDSEFVVNLIHKPE >gi|292596540|gb|ADCV01000008.1| GENE 73 116366 - 117031 947 221 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1837 NR:ns ## KEGG: Vpar_1837 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 221 1 221 221 456 100.0 1e-127 MSAFLGHIHYWLYRKIQLLVERENLILEKTSKVVDDLAEELHSISVDTYGEPINPSIPLE NIIDHGNIHGWLANQINIASVREAAFIKDMLDTNSGDEAVHVVTAILDAFAVQGQACGVV AQDSLEEHTAPAIYNALQNFYVNGMPCDGGDQVVSESPEEFTWVGDHRLQAGYWRTAGVD PKFMALAYQTWFEAFVKAIDPAFELVTTEENGTRLYTIKKK >gi|292596540|gb|ADCV01000008.1| GENE 74 117033 - 117989 1306 318 aa, chain - ## HITS:1 COG:MA0685 KEGG:ns NR:ns ## COG: MA0685 COG1251 # Protein_GI_number: 20089570 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Methanosarcina acetivorans str.C2A # 1 215 14 226 228 219 50.0 5e-57 MAQIAANLQRIKNGQRRYAITPRIPGGFIQPDQLQKYIDVANEFGAVLKLTGSQRIMITN LKAEDVDKAWEMLGMEPAYTVSNRVRSVKICPGTTFCKRAKQDSVHLGMQIERKYLSLEM PSKMKIGVSGCPNSCTESRMKDVGVIGTVEGWNVYAGGSGGAHPRIGDLIAEVKTEKEAL ALVDRIIAYYKENAQIERMGEFIDRIGLEAFKAAVLGDLEGAPAESKSEEPAVFLPGQGN DPEVEAPRLEAGAPITPDTIIRDIVETYPNVVPVLQGIGMGCLGCPSATAEPLWQAAEIH GFNVYDLVEKLETARKGA >gi|292596540|gb|ADCV01000008.1| GENE 75 118382 - 119647 1032 421 aa, chain + ## HITS:1 COG:MTH1521 KEGG:ns NR:ns ## COG: MTH1521 COG1489 # Protein_GI_number: 15679518 # Func_class: R General function prediction only # Function: DNA-binding protein, stimulates sugar fermentation # Organism: Methanothermobacter thermautotrophicus # 9 204 11 201 240 142 37.0 2e-33 MKVLYDTILKATYIGRPNRFVVTLDLNGESILAHLPNPGRMWELLFTGVTMYIVPHDKPD AKTKYRVVGIERDGVVIMLDTNYSNDVAQHLIENKLIPGWEEWRVVRREYTVKLHGTSSR FDLLLTNDKGDEFLLEVKSCTLFSKTGAMFPDAITERGRKHLLHLKELQNEGYHTGVLFL VQWDQAQWFLPDYHTDLEFAKTFKEVAPSLDWKAVAVAWDETFTMPTVTHECSYPSSILD TEAHDSGVYVMVMHLDHDLDLEIGSKGIMHFKSGYYMYVGSAKANLTKRIERHKRKRKKM HWHLDYFRGHCEMIAGLPIRTSGRPQAMTISAQERRKGKFSDDDSAARESADVDLTKIDV ECALADAVRAIAEWNVPNFGCSDCGCNSHLFGMSENPIHNKKFMNVIENYRMNMLDELVN R >gi|292596540|gb|ADCV01000008.1| GENE 76 119870 - 120676 608 268 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1834 NR:ns ## KEGG: Vpar_1834 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 22 268 22 268 268 475 94.0 1e-133 MRLFVKFVLLGIVGVCSVVLSGCSFIWTTENGDPATPEDIKSSVEKEFSVVHPNLVLQSS VVEKEKPFQRNVYVFYDESNGISFTTNSVIKRPTLPAPGGERKNDADFAYSQAYLVHLNG SLVERAKQYGIRMATHEEALELAESKATRVAGTNKISLFTYDEIIFVDESVKGGDILTFM KSIYSLYKPQDNPALLHPRSDRSVGFYYLPKGEADKTKAKYLIAFRFMAKNDWKETMLTG IGSTGNDTSAVERDFASILDDMIQHAVH >gi|292596540|gb|ADCV01000008.1| GENE 77 120830 - 123298 3200 822 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 7 819 3 810 830 890 58.0 0 MADQQWSHGNIHPVQIDKEMKNAYIDYAMSVIVMRALPDVRDGLKPVHRRILYAMHETGM TPNKPYKKSARIVGDVLGKYHPHGDISVYDATVRLAQDFNTRYLLVDGHGNFGSIDGDSA AAMRYTEVRMAKITQEMLADIDKETVDFMPNYDESLQEPTVLPAKIPNLLINGSSGIAVG MATNIPPHNLNEVCNGLAMLIDNPDVTVDELMTAIKGPDFPTGALILGREGIKKAYSTGR GSVKMRARATIEEMSKGKHKIVVTEIPYQVNKARVIETIANLSRDKVIDGITALRDESDR QGMRIVIELRADVQPDIVLNKLYKHTQLQETFGVIMLALVDGHPRVLNLKEVLGYYLDHR LDVIVRRTQFELNKAEARAHILEGLLIALDHIDEVIATIRSSQTDEIARNALMQKFGLSE KQAVAILDMRLRRLTGLEREKIEEEYKELLALIEDLKAILANEARQRQIIKDELDDMKKK YGDPRRSEITIDTSDLDVEDLIADEEMVITLTKQGYIKRMNANVYRNQHKGGAGVIGMKT KEDDYVTQIMHVRTHNTLLFFTSTGRAYRLKAYEVPEAGSRNSRGTAMVNVLPLAVGESV TTMIDLERVHEDVNLFMVTEFGVVKRTAIEEYRNIRRSGLNAINLDEGDRLISVNVTTGN QDILIGTKLGIAIRFSEHDVRLMKRAAHGVRGIKLNAGDVVVGAGVLNTDESEAQVFTIS EEGFGKRNDAEAYTLQKRGGKGSKNFKITNKTGDVVAVEVVHNDDEVMLISEQGKIIRFN MNDIAVKKGKAISGVKTQNLDEGDKVASIAVIPGAEIEEEVE >gi|292596540|gb|ADCV01000008.1| GENE 78 123378 - 123749 451 123 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1832 NR:ns ## KEGG: Vpar_1832 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 123 1 123 123 205 99.0 4e-52 MKKWLAAMFAAGVFFVGGFGQASAADWYYIDADADDAAWFIDNSSVYKTDDAATVLVKIN NVEGFTYIYTVRIDRKEKTWTELDTTVYSNAGIALLSSKETQKPTKIEPDTMGAEVMQAL WGK >gi|292596540|gb|ADCV01000008.1| GENE 79 124152 - 125195 449 347 aa, chain + ## HITS:1 COG:NMB0459 KEGG:ns NR:ns ## COG: NMB0459 COG3177 # Protein_GI_number: 15676370 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 46 250 54 255 369 73 28.0 6e-13 MRRFEYGQIQSLSWKMDILSLIAGIYRANGKEEVLLSQSPAILDSLVELAKVQSTEASNA IEGIVTTSTRLRQLVADKTIPRNRDEQEIMGYRDALNVIHESYDSISLSRNHILQLHKIL YNYQFNARGGQLKSVQNYISATYPDGHTEGLFTPLAPYETTEALDQICAEYNRVVGNGEV EPLLVIPIFIHDFLCIHPFNDGNGRMSRLLTTLLLYRSGFMVGKYVSLEAKIAANKDMYY AALRESSDAWYGESSCPTAFIRYWLQMLLAAYHDFEDRSALLINSGSAMNQVQAAIDRHL GAFTKQDIREWCPNISDSAIEGAIRSLVKAGRIQRKGGGRSTYYVKL >gi|292596540|gb|ADCV01000008.1| GENE 80 125364 - 125738 559 124 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1831 NR:ns ## KEGG: Vpar_1831 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 124 1 124 124 204 98.0 6e-52 MKKTLAAVLAAGALLIGGIGSVDAANWYTVGTDSNGVTWSIDNDSVKKDDKKAVMDIKAM DYEGYHYIVTEEFNHKKREVKDLKVTLYNPQGYVVKEEQVNKNSRKVEPGTPAYAVFQLI WGGK >gi|292596540|gb|ADCV01000008.1| GENE 81 126175 - 127605 1745 476 aa, chain + ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 86 454 9 364 372 326 49.0 7e-89 MSQYEFIDKRVPIALDNPSIYHDISKCKNCTLCRRACADVMSVLDYYDLDANGDVPVCIH CGQCAAACPFDSMHAKSELEKVKAALADPEKIVVIQTAPAVRVSIGEGFGYEPGTFLEGK MVGALRKLGADYVVDTNFGADLTIMEEASELVERLKNGGQIPQFTSCCPAWVRFAEIYFP ELIPNLSSTRSCIAMEAAMIKTYFAEKKGIDPRKIVSVSVNPCTAKKAETKREEENAAAR YHNDESLGMDTDISITTREFIRWIQEEHIDFNTVEESQFDDLIGMETGASIIFGNTGGVM EAAMRTAYKLITDKEPPPYALTHLEDVRGMEGVKEATVQLGDDVTLSVAVVHGGKNTRDF LNALKDSGKHYDFIEVMACPGGCIGGGGQPRTKLPQAVKTKEARIGGLYEADENYKWVAS YENEEIQTLYKDFLGEPLGHKAHELLHTHYTDRSAVLGTRKDVTPETCPTSPKFKG >gi|292596540|gb|ADCV01000008.1| GENE 82 128306 - 129244 810 312 aa, chain + ## HITS:1 COG:BH0675 KEGG:ns NR:ns ## COG: BH0675 COG1472 # Protein_GI_number: 15613238 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Bacillus halodurans # 15 310 168 479 686 84 24.0 3e-16 MMISLHGSTIGQSQKDVIRKYRVSGVMLTNENLINKNQVKTFTSDIMQTAITSSMVTPYI AVHRDRILHGNESFLRLPKPNRWGQLPMDRIINLATRSAIEMRDMGFNLVIGPNANLGVP NMSYTSDPTWAGHINLAMVERYQINHMWSAYNYFPAVTLGDASFGSANEAKAYLSNNDVA VFKRLIAQTTANSYMLVMSHIQIPAIDNEHLASSSKPIIDGWLRKELGYKGIVMTDRIDV GALQSNQKIGDYAVASILAGSDLILVDADTIHIDEVHRALTQAVADGTITTERLNESVKR ILLMKMQTQIDP >gi|292596540|gb|ADCV01000008.1| GENE 83 129716 - 130780 863 354 aa, chain + ## HITS:1 COG:PH0977 KEGG:ns NR:ns ## COG: PH0977 COG1672 # Protein_GI_number: 14590822 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Pyrococcus horikoshii # 3 320 39 351 496 110 24.0 5e-24 MNFVGRAEIIERIQSRIAMGQMSLCVVYGPHRSGKSYVASQLVRRHKAIYLAGRMANESV HVADINRALEARFVPVNAQDTFEPVESLQQAFVRLFESSVKTPQTVVIDDYPSLVEAVPQ FPIHLRDLLDTYKDTSRLNIILMANGLEQLDGRIIGDRSLIGPFVSEYLEVKPFSLVDMK SLGLHYAKDDLRTVFAVTGGLPAYVQYFDNGESIDTNIINLFFSVTGALFEETQYILHRD MKNITGANAILTGLASLERPYYVELLQESQIKSGTFTSRLNDLMSMGLVGRIQASNRGNA KYADYHFTNSMFHFWYRYVYKYWGDIVRGYGADVYYNHVKPQLKDFVQAACIAI >gi|292596540|gb|ADCV01000008.1| GENE 84 131074 - 131940 563 288 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1827 NR:ns ## KEGG: Vpar_1827 # Name: not_defined # Def: RNA polymerase, sigma-24 subunit, ECF subfamily # Organism: V.parvula # Pathway: not_defined # 1 288 1 288 288 541 95.0 1e-152 MLYTNEEPLVQRTCIKTANLQHDNYQSETLETQALPSHSLLSKANESKESIPEELKLQTL VCGHQVLSSLSDKSLVSICQKPNMRIQTVGYQPWSADELRHDAAQIELCRRYRPLILHYT NRMGNREFREDVENYLWAILIESIYSFDLNGAVPFPGFVKAGIMYGYMRYWKRERLRYRR EIHIPDRTTDDGEVAFGMDIFASGENVADMVMSADEEHRLRARLVWALGRLSPDQRDLLR RVYGECQSLVSVSEELNCSRQAIQRRHERAIRKLRRYLSTDFTDVRVH >gi|292596540|gb|ADCV01000008.1| GENE 85 132260 - 132868 175 202 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1826 NR:ns ## KEGG: Vpar_1826 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 202 1 202 202 416 99.0 1e-115 MAIDDKLTDLMATRLSKGEDLDLIYTNPKNHIVCFIPTYQPSGGDSTKCYFVDGREEMVH LPMRTITRELAMQEGLRPNYIMTSDGRRSSYTAPKTYGPHLTFAHIKCRRPIGKDVVYGL FNVAIPYEYIVTEGPEPDTSYIHVADFAPILVYQSPRHVKHKLNEAMLEHCNYVRKMLAR IKLSQNPQVVAELFIAWRDLTR >gi|292596540|gb|ADCV01000008.1| GENE 86 133913 - 135754 1444 613 aa, chain + ## HITS:1 COG:all4179 KEGG:ns NR:ns ## COG: all4179 COG1479 # Protein_GI_number: 17231671 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 21 607 19 590 593 123 20.0 1e-27 MAEITSLMKDIKGILDNKNQFVIPDFQRSFVWTDKDVDTLFSDFKEDTDNYTDRLDTLPG YLLGNIVLISNENNPTRFDVIDGQQRLTTLTLIFCALNNLFMDIVEETRRNLGANADMWM GHTFSFKEYFRILDNNLQFVDYKILHTQDLDFKETYKSIIKQGALVSDEDNTSANNLEAV YESILQHLRSIYDDEPQKLLYFLQYLTTKVKLIETTAPSIERAFQLFEILNNRGQSLEPL DLLKNYLLKNLTSAPGITQNQIKDFSDSWSQFLKNLKDTGKSKAIETSTFIKHFIIGTKA INVKKKDLFEHFKDNELVANDILQLSSDINSISKVYASINKDPLSNDFLSNDDGMYTLFT LFNTVQIHPLLMPFYNAPRVDKVRLVDAAVRYVAAVIFSYTQTNAIEAELPEIIEKILHE SDPARRLEVAVTELELRTKPYVDLIRALLPVKDFGSKDKKKAPKAFQILKFIELYLNQKD SIKTNKKIELEHIMPQAADNANYSFDDEDTRKEYLNHLGNLTLLDKSLNASVKNGSFADK LDHYKACEFVITRALAEEIDSPVQNQQPLINFQNTYFTVDNPEQITYWDKTQIDERGQKL VEVLEKLLLKQVP >gi|292596540|gb|ADCV01000008.1| GENE 87 136280 - 137050 353 256 aa, chain + ## HITS:1 COG:MT2891 KEGG:ns NR:ns ## COG: MT2891 COG5551 # Protein_GI_number: 15842365 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 253 53 302 314 79 23.0 7e-15 MTNTVEIMSVELVIAADPSIKIVQSIGSVLHGVLMEVVGTEYAGQLHESGLRPYSQYIYF DKDKKQYIWRLSAVTADAVNRIVRPTLEICEKIFLKQKRGHIYIKSRTILEETCYEALIN KFWSSDSSYTQAKLHCMSTTSFKVDQQYTIFPEAFRIYRYLLRQWNQFSTFGTMDTDLLL GALETGAFIKDYNLRMGIYGLEGVKIRGFRGQVVMQFKRNPELQRILALLSYYSEFTGLG IKTALGMGGVKSEIIV >gi|292596540|gb|ADCV01000008.1| GENE 88 137221 - 137397 160 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294792436|ref|ZP_06757583.1| ## NR: gi|294792436|ref|ZP_06757583.1| hypothetical protein HMPREF0874_00884 [Veillonella sp. 6_1_27] # 1 49 1 49 50 97 97.0 2e-19 MLIDILEPMGAQFDRLRCEVCQNLFLSPMNTGFLRHAVATVLTVYGIETHLYHIFHYL >gi|292596540|gb|ADCV01000008.1| GENE 89 138631 - 138699 156 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSPLAVDSAVAVLVAVLDALEE >gi|292596540|gb|ADCV01000008.1| GENE 90 139045 - 141414 1951 789 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1824 NR:ns ## KEGG: Vpar_1824 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 789 1 789 789 1455 95.0 0 MATTTNYLNDLASMRQFIRSLTFGNHNRGKATVRGIKESQHDDMIRRLDYFDIIRHIYTQ RIGKTSIHHLAKDDFVDGYNYLNNLYELYAAVPEQIYVQLCILSYIGANDDVTITDLYTN LNQEPYLDHYIDLVENLYEQRNKKQEPPCIIDQQYIQRQVKTLEILGAITKTELTKGYTY SIKPTIIKELSKQQLQELAMAVFFYTNVSITSAAGHILLKKIMYLINDFSLKDQQKCMYY DFNNTYFSFKDNNPNNVIDGDIFYPLADALHRQKKVRLSFYESGKPREIVSPLALQTYYG ENKNILCSINNGRIQWNRIDRIKSLEVTKYNSTNTVPKIQTRDKTFDTCIIHFLTLKDYE LVYDKFIRHFKESLTVLSRTDEYIELQLEVQDALQLLPQLRSYLPYVYITYTNKSSIKDK FYNNLYASLNIDFVEPEGYKKRKKINRFLHPLQRKESDNNRTKKDKDLDGTYVSSVLNDI NAITFTTQYQLQLDLINGVVHTKQDIEGLINHRRLLTPAPYKKTLRNDDYEQFLADALVE PNENGEEVESILPDLPLIIISDAERMFLKDLISDIRANWLLSPELCQILSTELKTVDTTF PKGSWTRVPTMTDDTPLTMQVITQCLQAIQNNERIMIQDKELSPCRIEYSVGSNGYTLIA YDHATDTFLDYPLRNESNIIKTAAPRLEDIETIYANYRDESKRTVTFTLYDANNAVDRCF NYFSNYTIQAKDINDEEFTIEVSYLPFQEIDILRHLLKLGCAVRITDDSPLKKQLEAIYK TALIHAPSI >gi|292596540|gb|ADCV01000008.1| GENE 91 141583 - 143727 1191 714 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1823 NR:ns ## KEGG: Vpar_1823 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 714 1 714 714 1322 96.0 0 MAIHNIFLSFLSKVSNTSIKTIVNADMEDAIRSSIATNESSLKYILYHTWKDEKTRDISF DKIYLLCTDGVMAHQSNSPSSYDIFVNQMCKFYNVMGHNEQAFFDALDHVPCGTDLDDIS RIKSSIIEMSKKILDFKDTFTNDKDEVRLYMDITGGPRNAAMILLVISRLLAYHGIIVDD VYYSGYKEIENGPGEITVHKVLDIYELFDIIAGFEEFKLFGSAKKLNTYFKPPENIGTGN IESTATATKKLLKAMDSFSEAINISSRGAFEKSIARLDDSLSLVHSMANNTDNNKTFDQE LIELLHKPIEQSYTTLLQHHRNHASDELAYIDWCLDHDYLQQALTLFCEYVPEYAVDKGI IECDPLVFNAYYEDTQQNKEKRLLQAAINAWNRAGNNIQFSAFYNVVMPDHDKKTSEKDV RSMPMRLFNSINNARMQCLAAMINAKKDEVAPNIDKVITYYIKFVRNEKKKIQIVERDLQ KQKERIHLMVDEETIKLREKCEVLLNQYGFTLYLQDGRYADNYTLLEYISFLQDILESSE NIENFNNILESLCKNIISEVLSKEEYKEYIICDADNSSFRLKKTSMLARNMVCNAILNHL IEEKKYKAYKSLIMHQLPDTKDSAVTAAELLLSQRKPYDKGVPLFEVSGVYIPHVALEDV TKTMKFIEQYFEIKKARNDSNYANKEALCKYTTSQELLYEMRKCVAMARELSRK >gi|292596540|gb|ADCV01000008.1| GENE 92 143788 - 145806 1162 672 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1822 NR:ns ## KEGG: Vpar_1822 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 671 1 671 671 1195 97.0 0 MEHHIYLTFLSTLHTKDNPYNPQKLEKTVVNLTEIAPFDVIRQTNESALKYLLHNKRKEN SAFKLDKLFFFKSPEMENTFKESTISSLNVFEEQMCDYINKTSIPITWDPETINYIDCGD IDYIDNLKDSIIDMSQAIMEYYKSKSSDDRVILHVDLSGGPRTAIMLMIAIIRLVAFQGI EIGSILYANVNANNNSIVRVYEGNSIYNIYDMITGFAEFNQFGSVDTLKNYVNTLDNPDV QIKELISSMGDFSEAVRLSSRGMFQRSMEDIHKLLTDIESSKQEIPANNRENHKNFEIEA LKLMSGKIQNNYKTVLANKEDDLAYIDWCLANGYLQQALALFAEFVPRAILESKMIILDD TIFPTDSDNELSASMENFNTINEYTAKTMEIVNNRATKINNKIKSVLLKYFSGDFSKESK QIIQRTLKNKKNNISTNITREDTQYPKFEEQLINDINQIILKEAEKEPHNYLKYKTFTNN NVNVPSKLLRLISNIGINTKSIVGINEFSKDIRRYFTAALVQQLKEIKDLPSNVVTVNDQ YEITLNDTNKLFKVRDAFISIFTNSNNDDIYRFLFANFVSYQYPIDLFPHQLYGIDGLTL NSVLKSNPEKITQVARILNLYRTLKGSRNDTAHAREEKRGQFIESEDIKRELKQCLNDIR EVREYICTYNQQ >gi|292596540|gb|ADCV01000008.1| GENE 93 145798 - 145875 60 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFHNMAPRESRIKNEAFMNTIPNFI >gi|292596540|gb|ADCV01000008.1| GENE 94 146901 - 147119 56 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIISSLQQYLPFTVLKLSNSLISFRRYLSVATVLTVYGIETHMQNHVLQHNKAVATVLTV YGIETETAILIN >gi|292596540|gb|ADCV01000008.1| GENE 95 147672 - 147779 291 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPLFAAAAAAAAWEGFAAGVLLGVSVYQAVKSDD >gi|292596540|gb|ADCV01000008.1| GENE 96 147987 - 148067 127 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDELLDLVIEIAVDEAVDFVLDELFD >gi|292596540|gb|ADCV01000008.1| GENE 97 148412 - 148597 175 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294792436|ref|ZP_06757583.1| ## NR: gi|294792436|ref|ZP_06757583.1| hypothetical protein HMPREF0874_00884 [Veillonella sp. 6_1_27] # 1 49 1 49 50 79 81.0 9e-14 MLIGIFDLMGAQSDRLRCEVCQNLILSPMNTGFLRYAVTTVLTVYGIETNIIRNFTHRRT H >gi|292596540|gb|ADCV01000008.1| GENE 98 149745 - 149807 68 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAMLFLTLLVWFVLPSRNDY >gi|292596540|gb|ADCV01000008.1| GENE 99 149818 - 150216 376 132 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1821 NR:ns ## KEGG: Vpar_1821 # Name: not_defined # Def: protein of unknown function DUF805 # Organism: V.parvula # Pathway: not_defined # 1 132 1 132 132 226 97.0 2e-58 MENLQQELKSMLSLSGRMNRRSYFMNLLMIIGIGYLGGLCISLAPVSKFFWVLGWSIIGY SVVRELAIASRRIHDLNGPTYLAGIYIVAAIIAIFEPTLAKIMGFVKIGLVLMPGDEDPN HYGERPDSMIVV >gi|292596540|gb|ADCV01000008.1| GENE 100 150331 - 150606 286 91 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1820 NR:ns ## KEGG: Vpar_1820 # Name: not_defined # Def: CRISPR-associated protein Cas2 # Organism: V.parvula # Pathway: not_defined # 1 91 1 91 91 159 95.0 4e-38 MRYLISYDISDTKIRNKVVKYLESFCYRVQYSVFLCVYAHVRVETIAKKLEVLTQGDETR RLLIVSISDTAKTPIWCNKMIPLTEDKMLII >gi|292596540|gb|ADCV01000008.1| GENE 101 150624 - 151619 743 331 aa, chain + ## HITS:1 COG:alr1468_2 KEGG:ns NR:ns ## COG: alr1468_2 COG1518 # Protein_GI_number: 17228961 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Nostoc sp. PCC 7120 # 2 315 2 321 335 117 27.0 4e-26 MLETLYVMTPGISIRQDGGLLVLEKDHSVIKEIPIATVSNLVLGRTIQISTQVMFSLVKQ GSLIQFVDYKYQLVGILGDEHTTLQRLLWQVACFQNQEFALDGAKYIVRRKIKGQIALLN QYKKSKCIPNFVAVHRTMQALLKRVERTKKVDTLRGIEGLASRTYFSVLGHVLSEPWEFS GRKRHPSPDPVNAILSYGYSFLEREVRACLLTAGLDVRIGVLHSTNNRKDSLVYDVMDIF RQDIIDRFVLKLLNRHMILPEDFDLSERGCFLSKETNKKWVELYEDYMKAELSRLDNLAP RKWIQQEIQAFISYLKSLGETVDIEKSENIS >gi|292596540|gb|ADCV01000008.1| GENE 102 151812 - 152177 337 121 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1818 NR:ns ## KEGG: Vpar_1818 # Name: not_defined # Def: CRISPR-associated protein, putative # Organism: V.parvula # Pathway: not_defined # 1 121 1 121 121 237 97.0 9e-62 MFINHTNHPSQYWSDEQLAAAHQYGEVVDIPFPLIDPALPSGEIGQLVQEYAGRIISLNP QAVLCQGEFVYCHALVERLLAVGITVLVATSERLVSESYEAGINEKIVNFQFVQFREYCH L >gi|292596540|gb|ADCV01000008.1| GENE 103 152208 - 153809 1491 533 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1817 NR:ns ## KEGG: Vpar_1817 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 533 1 533 533 1068 97.0 0 MQVNAILFDVQSIQKYIFANNKLKANVGASFIVDRLFEYVLCKEIINKLGVEADTTSWLT RSDSITSLPEPVYVAYIGGGNALVLIDDKHESLVQDIVKKFTTQVLVQYPGLKVGATTGH ITLDGTQFSADLGQLYKQLKANQFALNPIVHPANTGLTTICDFSGEVADTTQSFGDDKRL VATSFTAKFEAFEAANSRLKIDLFGTETTDWVFPSEFEELGQNQSTEKSKTGINDIAIVH IDGNNMGAHFRQCKTLEERSALSKRVATKTLESFKALVQWIIDKYDILDENLELSKNMLP IRPIIIGGDDITFICNARIAVQASHYLMQQLLSDKNSISISSCAGIAVIPTSYPFFRGYE MAEQLCDSAKSKMREYNAVHKVNESCWMDFAFLHGETAPTLEQFFANEYSSLTGNMHFGP YQVFNDNIEAEKDIFALSKLLECTHQFILVKDKAYSGDLLAHNKVKELRSVLQDNEHMWT VFLEQLRNTNKFMPTVSGWDAFKEKLWAKVNGKMRTPYVDAIELMDYVLPGLE >gi|292596540|gb|ADCV01000008.1| GENE 104 153812 - 154459 777 215 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1816 NR:ns ## KEGG: Vpar_1816 # Name: not_defined # Def: protein of unknown function DUF324 # Organism: V.parvula # Pathway: not_defined # 1 215 1 215 215 410 97.0 1e-113 MYTLTIKLLSPTMLMSGQGDVNTDSTIVHDRYGIPFIPAKRVRGVLYESAIEVAEMMHAA GLNTFTIDDVKVLFNRLEGAEDNPRLSISNLTIADYDVVASELAALEEQYPAVFTKERVL EEYTSMRYYTSIDQVTGTALEGTLHNSRVLNRGLAFSGQIDVEDMTELERLILACAVRNL TGIGGKRNRGFGQVECIIDDTSFDLESLGGTLWNK >gi|292596540|gb|ADCV01000008.1| GENE 105 154447 - 156027 1636 526 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1815 NR:ns ## KEGG: Vpar_1815 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 526 1 526 526 1003 96.0 0 MEQVNITITVKSPTLIANSSTAGVLTSTRGSIDGRVLRGLFASQFISSHKLGREAHKNQD FMKLFYGDLRFVAAYKHTPKGTSFPAPLSLQKNKNSEGYASDDVVDFYTGKDILGFKGVK GFVIVDGKECSPVQIETAIKLHMSRSLEQERVQGRSNEGRNIFNYEYIEPNQVFVGCVVG PKATLEEFVRQFPKQLDCHIGRSRRTEYGYCLVEIGDITAVPTPVNSGNSVYVRLHTPLV LGNESIGHVVAQAVQSIGLDISVGTVFASYQEEQSFNSIWGVRSSAEASASAGSIVELVK ESGWSQDDLDKLQNILYNGMGTRLQEGYGQGRLWIPGEFKLVKLGKQEVPKLKSLHMPTQ EIAKKVLEKQVIVNARLRAAHDVDTYIKRTMSRSGISKHFASVLLTELGTNHETGHKQLQ QFLEDKKAEGQKKNEPRVIEKNLREFHLEHAYTRSETKRVNLMEYIIDFDAPTLVAACLA KSGESGTYYEIPAELVDMVGLDKQKLSNVVAYEYWTYFFRHIRKIK >gi|292596540|gb|ADCV01000008.1| GENE 106 156041 - 157375 1517 444 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1814 NR:ns ## KEGG: Vpar_1814 # Name: not_defined # Def: protein of unknown function DUF324 # Organism: V.parvula # Pathway: not_defined # 1 444 1 444 444 847 95.0 0 MLNSASVIGRYTLTGTVNLTSPLVIRAGVSNDILNDTVDDIVVTYHDGQPFIPGTSLAGV LRQAIQGLEPVSEDVLFGSIDDKGTQSALQINDIPLDNTNIVVRDGICIDDVRGVTKDGA KYDFEVIESGATGRLRIDCVIRQCHENQADKIERALVALANLLKNGISIGARTVNGLGRV TCKDISLEHYDFTKPEHVKAWLLRKAGTSVAIPERCMIAEKDLVIDIECCLEDTVLIKSI FEEAWEDKSVALFIPGTSIKGVLRHHCSRILQALSRSNQAVDALFGYSIEKTNESRKGRV MVDEVYFDKSFIQEEQPRIRVDRFTGGAMNGALFQDHPVRKSKGKQLVFPLHMTVKDCSD SEAGLVLLLVKDLMTGQITLGANRTIGYGRIKGNSVAVQYHGESYGIDGTGKVTEGESTK LEALVQALHQSTEDTMLAKEGAHE >gi|292596540|gb|ADCV01000008.1| GENE 107 157368 - 157931 579 187 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1813 NR:ns ## KEGG: Vpar_1813 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 187 1 187 187 337 91.0 1e-91 MSKQLHSHEGVYTRTCGTCGPTANVNVLAVVNEYMKQEGRVITWSVHEVKWGYYKQGGFQ FSDGTTDIDLAYLQDMRIFNETEELRLTIQHGEIVYRYINDEAGEPVTYVDSSSRMIGEV DAGRTQLNRVEGFTSLVDTGRKLSQIIPVFTIKQYCYLTTRNYIGYLDNHQASYTDYRYV KIVDKEV >gi|292596540|gb|ADCV01000008.1| GENE 108 157933 - 159924 1756 663 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1812 NR:ns ## KEGG: Vpar_1812 # Name: not_defined # Def: protein of unknown function DUF324 # Organism: V.parvula # Pathway: not_defined # 39 663 47 670 670 1155 91.0 0 MAKTIADRQKASRARLEEVNGQDYVEQQSKKNSPKKSSSYNHNNSNNNQNSSNRGKSSKY PTRPASAAYNFVRLPEHVIPAEFYNGHFEGVTKDVLKAYCDHVQQADMHTGYIDLTITTE TPLFIGGPSKQDEETPLEFYGGQDNPTIPGASLKGMVKQIFKIVTVSSFRPYQRGTGLGD FEDRYLYFRDFASSIKSLKEYYTSRMVGEEKNGKGEMKPATKATPGFIIQTVDNNYFAVP SKSRKMSYTDDYEMQKNKKGRGSIDWNDQYVNIHTGSMDSKMSYMRITRPGNFTDKRIPI LQECIDSYKDDKNRGTLNLLDKKVGKSGNAAKNYTRCNDVKFVVPCFFSEKDSIVKHFGH GRFYRIAYDLKISDHLPTTLEQHNNGVDLCDSVFGYGDNWAGRLSFSDAHVVGPVRMCQS DYPHPLMGPNPTSFQLYLEQDVDDHSNYNHWGHERASIRGYKMYWHQPLAKAKDWTRTKE EKAIKGTRKIRPVDTGVTFKSRIHFDRLSSVELGALLMSLDLDHYSGGNRRTYYKLGMGK SIGFGSIKLESAVTVFDSKERYGSLFGGDTWNTGASITTLNEYVESFTQYRDKVLGSNIS SYKAVLDDLFMMLDWNIANGPNAAKNWTEGISMMTIKNNKMDPRIRFRSKLDTPKSFIAK WSK >gi|292596540|gb|ADCV01000008.1| GENE 109 159924 - 160727 672 267 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1811 NR:ns ## KEGG: Vpar_1811 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 267 1 267 267 518 94.0 1e-146 MLGTVTIALEAQNRSSLPAFPGRYLHAALFSILSHVDADEATWWHDMEGIKPFSLQLSFK EPRQDNIIRSGDILYLHVSVWHSELWGLLEGIPEGLEVIFGRLRTTIIGIRYGAPFNLPL KVDNELELISRRLSAKPAKYITFEVMMPTSFNGTYGDITFPTSSLIFSSLVDKWNAGDMT DVLDKDLIRSVVDKVILERWEGHTKRVFYGRDRGLTGFVGKFTFNISKLTEEENQLITIL ALFGQHCGIGRLSSQSLGQVRVTLQNK >gi|292596540|gb|ADCV01000008.1| GENE 110 161064 - 161738 421 224 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1810 NR:ns ## KEGG: Vpar_1810 # Name: not_defined # Def: amidophosphoribosyltransferase # Organism: V.parvula # Pathway: not_defined # 5 224 1 220 220 434 96.0 1e-120 MEVHMEQLIRRFTLSSNEYLSRDCVGYYRDLYLRFREPGNPDFLNTLKNTLNNYCPSVLK SARQEVYDRVKRDIPDIMKAEKLEEAVVAVVPRSKAFMSPNQLGFRDAVQECVRILQANG YSGITDGISCIMRHTNTKTTHIHKNLPGFDNCGREPYVGITNDTCHINADVVRDKTVILI DDIYTKTVNVDEDCIQALYDAGAARVIFYAVAYTYRRSSYRKGA >gi|292596540|gb|ADCV01000008.1| GENE 111 161740 - 162687 753 315 aa, chain + ## HITS:1 COG:TP0393 KEGG:ns NR:ns ## COG: TP0393 COG0758 # Protein_GI_number: 15639384 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Treponema pallidum # 85 226 102 238 302 74 32.0 3e-13 MNISPIALKIWAVHNTTSRITTRKSFHDNWKTEDEFLAMMSDIPNIDDVVHDLSVAVDDM DWMDGAVCCFDADFPVINESAPKGDRPYLLFYKGDLSLLSDLNRNVAVIGYTTPNEDIMA RESKIVEQLVQRGQHIVSGLAKGCDAIGHTVCMDYGGKTIAILPSPLNAISPADHRDMAH QIIEKGGLVISEYYNGPRSRHEAINRYVERDRLQALFAKAVVLIASYEGRDGDSGSRHAM GKAHSYGHLACAMYDETTDSEVLEMKLNRSLLSQQKAKQLVTIPSEVGAAGYTSVTVDDL VSLVNPALEAQQKLF >gi|292596540|gb|ADCV01000008.1| GENE 112 162714 - 163250 342 178 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1808 NR:ns ## KEGG: Vpar_1808 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 175 1 175 178 281 78.0 8e-75 MFHIVDVDNTLVFTDELNTAGYVHALACMALEPRKVVPRITREIVQEWYPQLSEYDLVHM ATLKQAYVESHLDMSQLNSSVARVLSTYGRERCALWTAANPERIRMLLRHHMVTDYRAIR FSNKTENDISHMVQDFCVLFDCEPEELCFHEDNPEVINHLRKLGLTVMAVEVKAKTVA >gi|292596540|gb|ADCV01000008.1| GENE 113 163367 - 165622 1238 751 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1807 NR:ns ## KEGG: Vpar_1807 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 751 1 751 751 1476 97.0 0 MRFLTLSTTGIFNAIRPSLFPPIEGKETTTFLLALDYYVPDRCFLEDEQKDVETARERYD LERKRIRAFVKALCNDWGKPIEELRTEVINCLPEFISHGTYNGEPLLSEPRDGYYTIYPM YKSYRGRDMLFPTHQSSKEEAQYIFDHMLRYFLKAFFEPDAFFGYLDGAFHIDTPLSVTT VQQILEDLEREAVPSPLSVSSISNTHTMDEPTIINTEFLLIADAFGAYMVQAMEGDTESE QLAALTEDPFVCEMCCSLHKCFMINNRCFSISIYDECNIWVDKILDAYAIHDYLQILNVY NDEFPSYDDGVIGYEKQYLVGPLLDNLVKELTREKLLVQLSPQNEQRKDYLNFILTYDEA VQSIFEEICEKKIDGRDIYKQQDLATVLTLDVRLCCTFYCMIDACRHAFNRHMYADILPI VDKLDVQLAKVQISATDTWQVEYLVKVSRISQWYRALAYACLGDERIEAILQDLMVMQQQ DPVLYKEHIDSIFENLDDPEHAFNTEHLRYALLHYYIETNNQLGYECYIKELYPPILGID SDYKVQKNILLYGEDGKYCENYSNRDFYLWLRALWTFYLSDIDKEFWNELAEQWEKQDYI PIFYGINDYELCVNYMIKLAVHFGDMQRAEKYKKEFDMALPNKKEPMEDAPSGYTWPFFD CYIIAQVNETLGNIEIAKENYHKALSMATFGEARWEQYEEQHGGIWKTYKDFGYSGPDLK FEDWIKDSTVTYKTIEEYKKALDKYVFYMYK >gi|292596540|gb|ADCV01000008.1| GENE 114 166030 - 166176 81 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTGLLRYAVGTVLTVYGIETSRQLQVGDRVAVGTVLTVYGIETGFSM >gi|292596540|gb|ADCV01000008.1| GENE 115 166953 - 167021 71 22 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKAQNAMLMRIMQGFRPHQGII >gi|292596540|gb|ADCV01000008.1| GENE 116 167940 - 168935 936 331 aa, chain + ## HITS:1 COG:alr1468_2 KEGG:ns NR:ns ## COG: alr1468_2 COG1518 # Protein_GI_number: 17228961 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Nostoc sp. PCC 7120 # 1 328 2 331 335 175 29.0 1e-43 MSSLYVTEAGSFIKRDGGHVVVGRNNEVLFEVPLERIEDITVFDSVSITSSLVTDFIERG VPITWLSGYGKYFGTIINTNTIDINKHKKQFDLLDDNAFRVAMSRKIIRAKVRNQLTILR RYARNLEEDINIDVQIANIKSVRSHIGECMRVSELMGYEGLISRLYFEALGKIVPSAFAF TKRTKQPPRDPFNAMLGLGYSMLFNEILAGVINAGLHPFVGVMHSLAKGHPALASDLIEE WRAPIIDSMVLSMVSRNMVDLSEFDNSDKGCYLTAEGRKAFLMAYNKKIRSENQYIDDRK SYRESIYKQCKQFASAIIHEDVDLYTPLEIH >gi|292596540|gb|ADCV01000008.1| GENE 117 168937 - 169212 240 91 aa, chain + ## HITS:1 COG:no KEGG:TherJR_2014 NR:ns ## KEGG: TherJR_2014 # Name: not_defined # Def: CRISPR-associated protein Cas2 # Organism: Thermincola_JR # Pathway: not_defined # 1 91 21 110 111 73 46.0 2e-12 MKKFIVLVIYDVVDNKTRNRLVKCLERYGVRVQKSAFEALLNRKQYDAMMRRASKMINPI EDSLRVYVLDDIINIYTWGIGERKEQDCIVL >gi|292596540|gb|ADCV01000008.1| GENE 118 169705 - 169770 58 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGTETPKYLLTIRLFCIEELN >gi|292596540|gb|ADCV01000008.1| GENE 119 170706 - 172049 1860 447 aa, chain + ## HITS:1 COG:PA3517 KEGG:ns NR:ns ## COG: PA3517 COG0015 # Protein_GI_number: 15598713 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Pseudomonas aeruginosa # 1 445 1 447 477 323 40.0 3e-88 MASTVIDSKVFGALFSTDEMRRVFSDLNLVQKWLDTEAALAQAQGELGVIPKTQAEDIVK YADAKALNIDEIGEFYKSSITIVPLLRAFKEILPDNAGEYVHWGATSQDIVDTGLILQEK EAYQIILRDMKVCQQHVLNLVKKYKDTIMCGRTHVIHALPITLGYKVAVWADELGRDIQR LEEIEKRVFVGQMSGAVGTLASQPKKGLETQQRMMEILGLGQPTISWHVARDSQAEFAST LALCAGTLGRIAHEILSLQRTEILELEEPFFMGKVGSSTMPHKRNPQVLENIIAVCRSVR TIAPGITEAMICENERDWGCLLTEWESIPRACELLAAALEKSKDVLENLIVYPKHMEQNL YKLRGLMMSECIMMHLAPRLGRMTAHSIVYRTCMKAYEEEAQMKDALMAEPEVTEAFTET EIDYMLDPHNYLGLAVQFADRVLQKYK >gi|292596540|gb|ADCV01000008.1| GENE 120 172227 - 172328 99 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDYEIIMLLLQVITVVIAFGALIALICLTKDK >gi|292596540|gb|ADCV01000008.1| GENE 121 172618 - 174036 1766 472 aa, chain - ## HITS:1 COG:PA1418 KEGG:ns NR:ns ## COG: PA1418 COG0591 # Protein_GI_number: 15596615 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Pseudomonas aeruginosa # 10 454 7 454 463 180 31.0 5e-45 MDSLTIIWVIVCAYLLLNLLVGVYCHIRVKDSTDYLLAGRRIGVLMTAGTLAATEIGGGS TVGVAAKAYGSWGLSAGWYVVSAGIGVILVAFIAPLLRRAMATTVPEIIGRRFGASSHLI TSILSMLATITLAGVQITATATIISVLTGLSTELAILICGAVLVIYTMSGGMWSVTMTDV IHFFVLVGGFSLAVPFVLHNVGGWESVVTKLPPEQLGFTKGGWKTIIGLVIMYFMTFSTG QESVQRYFAAKNERTAVLGSIICGIIMALFAFVPAVLGLVALAEFPGIEANNAVATVALN LMPPVMAGFVMAAVVSATLSSGAGDLLGAATVFTKDIVEHHFGKSLTDAQLTRYSRLCVL FLGIIAIIISLVSKAIIPMLVFAFTMRSAGPFAAFLLGLTWKNATAGAGIWSIVLGSIAG VYWEFVGNPYGIMSIIFGSIVSLIVFVAVVFIERFMGKPPAPPAIPDDVKEI >gi|292596540|gb|ADCV01000008.1| GENE 122 174310 - 174882 603 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294792460|ref|ZP_06757607.1| ## NR: gi|294792460|ref|ZP_06757607.1| hypothetical protein HMPREF0874_00910 [Veillonella sp. 6_1_27] # 1 190 17 206 206 346 100.0 4e-94 MIQRILMLALVLLAFTMPTEAITYQELKTSPQFKLVYSQSINGPIESGGLYIYLNTYSIE ALRYAPPQYSLRGTYYIVMDTSYQSIINERQLTVDYDTNYSLATLIHSSRIMNPSPSMLA LIEASESKSGLAMTGVDVARYTFDGATKPMHYVNDTRKVPLNRNNTIIYDIADAMFVSVY QQHFDDIVAQ >gi|292596540|gb|ADCV01000008.1| GENE 123 174945 - 175460 408 171 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294792461|ref|ZP_06757608.1| ## NR: gi|294792461|ref|ZP_06757608.1| hypothetical protein HMPREF0874_00911 [Veillonella sp. 6_1_27] # 1 171 23 193 193 332 100.0 6e-90 MQIQAVSQADLLNAERFEHIDSSADSGRGDGKYLDLSSVKSVTAPNGHRRIEAVIYVSMP AANMIQGLSVQYDYQMDRSLRHLINDHDRSLKQGDKTPYISIWRAKQGSSGITGTVNDGG TYYNNGQIRQQRIYAENLKAMILPAEFGDEKYKLPNLIYKKIFGLSYDDEL >gi|292596540|gb|ADCV01000008.1| GENE 124 175466 - 175906 141 146 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282849527|ref|ZP_06258911.1| ## NR: gi|282849527|ref|ZP_06258911.1| hypothetical protein HMPREF1035_0540 [Veillonella parvula ATCC 17745] # 1 146 1 146 146 206 100.0 5e-52 MYGTRVVKTVNKHRLKIKLVFGLLIKLVLLLIWGISIWAFYTLLYDRYVLEAYPLRDYLP VLIFTFGNIWVLPWLILWHEKLYPAFDKPKIYYRVKAWYFSLKDQSLVGTFIFYSIDFVI KLGILMYGTIIVLAIVIFVFLTWLRF >gi|292596540|gb|ADCV01000008.1| GENE 125 176163 - 176264 157 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGYKIIMIILGILSVMISFGALVALICLEIAK >gi|292596540|gb|ADCV01000008.1| GENE 126 176557 - 177777 1277 406 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1796 NR:ns ## KEGG: Vpar_1796 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 396 1 387 419 199 35.0 2e-49 MLRKSLIIMAVLAAFTMNVSAVQIEVPAGQPPIPGADANIPANAYENYRAGSLSNVGASD VIKLHSESKKRMDMYVTDWGLTRDEVNQIASDSEKLMDLLVNESAVVLLHDERNNIRASV PGLLLASKYYPKRSDGERLSIVRENSIFFAIGTKQNYDDALGKLKSERKGEFTYPGITHG KWAIETESFGENTPAMVAVVGLFNQPNQEYMVGLSYKNQPVTGKLEHVMSNYVIPSIRSL DDMDHYSESIQWDNFTYRIPKGLKLIAQKSLKDSAEMRDYRGSGIRLIVAKKPVKVDDKY IYSFIDEISEIKPESQIIGDAPIQSASVWNNGVPSLLVDNYQPGKTSLMHRFLRDDKNVY IMSLVYIDGATPYSHIQLRNTVEYSDFANVETLRNKVIRMQSKDKM >gi|292596540|gb|ADCV01000008.1| GENE 127 177813 - 178388 417 191 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1791 NR:ns ## KEGG: Vpar_1791 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 189 1 189 192 223 57.0 3e-57 MKRKYMITGLVIGLQLVSGYSYVTDASWLSKTWDRLETNAAKQSYDWPKAEQYRHYSIGQ YVGERLPQEELMVLGVPLGSTFDAVKASLGQPTKETRYGLSYGGVTFGNTILGGMDNTVT YISITNRDAVTYRGIAVGDSMRKVLKVYGRPDYIDYDDRWFYGLLQYRTDMMNGIQFEQK GDKVSKILIYK >gi|292596540|gb|ADCV01000008.1| GENE 128 178580 - 178681 87 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDYEIIMLLLQVITVVIAFGALIALICLTKDK >gi|292596540|gb|ADCV01000008.1| GENE 129 178838 - 179374 746 178 aa, chain + ## HITS:1 COG:FN0320 KEGG:ns NR:ns ## COG: FN0320 COG1853 # Protein_GI_number: 19703665 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Fusobacterium nucleatum # 21 175 24 175 180 59 30.0 3e-09 MKAFETKDYKAFTMFENRWALVTAGMLDDFNTCTVSWGSMGNIWGPNGGDISTVTVYIHP ARYTQEFMAKYDTFTVSFFPESYRKALGYLGSHSGRDENKVANSGLTPVAAGDGVTFKEA ELTFVCKKLYEHQFDEAYLAEKVKDYYASNPAVYTQAGHDRWEPHYMYIGEVVEAIEQ >gi|292596540|gb|ADCV01000008.1| GENE 130 180083 - 180526 452 147 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1789 NR:ns ## KEGG: Vpar_1789 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 147 1 147 147 244 95.0 5e-64 MSVVKPLLWLLEPYIVYKAYLWGARFMAQPFTWEGELDWFAFMLTLLLVIDVVALPLVIF YCPGLNPGVRAPDWIRRLGTPIYTVHNWLDSKVGGDTSTPIVWLRKALHSLLLFIYYLVP FYVGGHLVMGLVVALMYDVLVWAHGGV >gi|292596540|gb|ADCV01000008.1| GENE 131 180526 - 181125 391 199 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 1 180 1 181 185 155 44 3e-36 MTTCEWPTTPLYQDYHDYEWGRPIHDDQHQFEHLCLESLQCGLSWLTILNKRNIIRECFD HFDIDAVAAYGESDIERIMQTEGMLKHRSKIEAIINNAAAFKRIQSEFGSFCNYIWGFTN HKTIIYENHPEGHFPTKNGLSTRISKDLKTRGFKFVGPVTIYSHLQASGLINDHGKDCPC FEEINKTADIIRLPVDDEA >gi|292596540|gb|ADCV01000008.1| GENE 132 181146 - 181307 117 53 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1787 NR:ns ## KEGG: Vpar_1787 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 14 53 3 42 42 68 90.0 6e-11 MIDPLRRERVYVFIYKAGRHEMSRYRLIDFSVHPIPHNNKFNYVNTSMRKNYC >gi|292596540|gb|ADCV01000008.1| GENE 133 181576 - 182292 820 238 aa, chain + ## HITS:1 COG:BH4055 KEGG:ns NR:ns ## COG: BH4055 COG1811 # Protein_GI_number: 15616617 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Bacillus halodurans # 1 237 1 230 236 107 35.0 2e-23 MIGLGTAINIGLIIAGSLCGLAFGRFMKENLKQTLMIVSGIIVLLLGMSGAMQYMLVIVN GSLQTTGPLLMIISMVVGAVIGEIIDLNHWITVFGDWVKARTGNAGDPKFTHAFITASLT FTVGAMGVLGSIQDGLTGNYQTLLLKGILDGIIVMVMVSSMGKGALFSFIPVGITQWLIT AMAHIAAPLMTPSAIDNLSYVGSILIFCVGIDLIWPGKVRIANLLPAIFVAMGLTFLL >gi|292596540|gb|ADCV01000008.1| GENE 134 182649 - 182933 274 94 aa, chain + ## HITS:1 COG:SMc02476 KEGG:ns NR:ns ## COG: SMc02476 COG3549 # Protein_GI_number: 15966812 # Func_class: R General function prediction only # Function: Plasmid maintenance system killer protein # Organism: Sinorhizobium meliloti # 1 94 1 92 92 99 55.0 2e-21 MIIGFKDKETEKVYYQSFSKRFSPFIQRLALRKLLLLDNAESLQDLRWPPGNRLELLQGD RFGQYSLRINGQYRLCFKVKDSSSFYDVEIVDYH >gi|292596540|gb|ADCV01000008.1| GENE 135 182950 - 183270 427 106 aa, chain + ## HITS:1 COG:Cgl2962 KEGG:ns NR:ns ## COG: Cgl2962 COG3093 # Protein_GI_number: 19554212 # Func_class: R General function prediction only # Function: Plasmid maintenance system antidote protein # Organism: Corynebacterium glutamicum # 12 83 20 91 121 72 52.0 2e-13 MEKFIPTPTISEILKEEFMDPLGLSAYRLAKDIHVPVSRIQEILNGTRSISADTSLRLAK YFDVSEGYFLRLQMDVDLRTAKLSEGMDEVLSSIAHCASLDPVDCQ >gi|292596540|gb|ADCV01000008.1| GENE 136 183357 - 183710 482 117 aa, chain + ## HITS:1 COG:BH3485 KEGG:ns NR:ns ## COG: BH3485 COG1393 # Protein_GI_number: 15616047 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Bacillus halodurans # 1 116 3 118 119 114 56.0 3e-26 MLFVEYPKCTTCKKAKKFLDDHNIKYTDRDIKSENPTAEEIAAWYPQSGKDLKAFFNTSG MIYREQQLKDKLPNLSEEEKLALLASNGMLVKRPILVLEDKVLVGFKEAEWIEALKL >gi|292596540|gb|ADCV01000008.1| GENE 137 184299 - 185072 980 257 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1782 NR:ns ## KEGG: Vpar_1782 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 257 1 257 257 410 98.0 1e-113 MKFLQSLSAQVSLRTQGAILALGLLFIILDALTEPMNPAIDLAWVTVIICGLPLLINSVQ SILDHLEIHANFLIVIAMVALIAIGDYHTAAYVGLIVHGGFFLEQLITGDVHYTLDDDML PTMPTQLVALRQGINNYSSVIVVAVMLLSMGSYALTQNFMHTITLLVILCPCSLELVLVA LMMGSLVDENSPTAGLSKEAKQCHLGLLIVSILFHVVIIGAGVLGSINPVTAAALHGLAR LGLVYNLKVLNGSLCVA >gi|292596540|gb|ADCV01000008.1| GENE 138 185194 - 186516 1572 440 aa, chain - ## HITS:1 COG:BS_glpT KEGG:ns NR:ns ## COG: BS_glpT COG2271 # Protein_GI_number: 16077283 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Bacillus subtilis # 1 433 2 434 444 508 59.0 1e-143 MSIFSPAPHIERLPEAQIDSTYKRLRREVFAGTFIGYATFYLIRQNFSLAVPYMIAEYGY TKADLGIVMTILSVAYGVSKFVMGNASDRSNPKYFSTVGLLLSALVMLLFGTLPGVMSSI PIMCVLALLNGWFQGMGYPPYAKNMVTWFSRSERGAWWSWWNVSHNLGGGIIAPLATLGI YLFGTWHSIFFFPALISIVLAIITFVLLKDTPQSCGLPPIEEYKHEVVHTHTENEEKSTF KEIFYKYILHNKYLWYLAIANIFVYFIRYGVVSWAPTYLTAVKGFTKEGSRWAYFLYEWA GIPGMLVSGYLSDRVFRGRRAPATICFMLFVILAILVYWFNPAGNILIDNLALIAIGFLI YGPVMMIGLQAADMVPRVATGGATGLTGLLGYLIGSAGAGAFMGLMVDLYGWDGGFIALV GACILSIVFLLLTLGDKGQQ >gi|292596540|gb|ADCV01000008.1| GENE 139 186836 - 187087 296 83 aa, chain + ## HITS:1 COG:L96595 KEGG:ns NR:ns ## COG: L96595 COG2217 # Protein_GI_number: 15672077 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 6 82 218 294 593 59 38.0 2e-09 MTQGNAKIVSLADRWATWIVVIALLAAVGTYVVTGEIIRAVTILVVFCPCALVLATPAAI MAAISNASQHGFLVRRSRVLKRT >gi|292596540|gb|ADCV01000008.1| GENE 140 187032 - 187643 774 203 aa, chain + ## HITS:1 COG:BS_ykvW KEGG:ns NR:ns ## COG: BS_ykvW COG2217 # Protein_GI_number: 16078449 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 11 176 473 637 637 134 42.0 1e-31 MRANTVSSCAVVESLNELDVMPVLLTGDHVATAKTIGKRLNVSNVIADCLPEDKMDTVAQ LQQDGNIIAMVGDGVNDAPALKKSDVGIAMGGVGSDIAVEAADIVLVNDNVKEIPHLVAL SKRMMTTIKINLSFSLLLNFVAIILAMVGTLSPVWGALVHNGGSLLVVANSALLLRWAYK SNHVVDDDHSVLVKAARKRVFEA >gi|292596540|gb|ADCV01000008.1| GENE 141 187828 - 188418 809 196 aa, chain - ## HITS:1 COG:FN1223 KEGG:ns NR:ns ## COG: FN1223 COG0778 # Protein_GI_number: 19704558 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 4 175 5 157 175 79 27.0 3e-15 MNTLECIKTRHSTRKFKADQVSRELIDQVLDAGRRAPSGGNTQLTHFMVITNQDVLQELV TLIQEEYGKMPITENTLPYMVNIIKMSSEGKFVFHYNAPVLIVLASKANYANNFADVSCA MQNMMLACNELDLGSCWVNQIRHLQDNERIQAKMRELGLSEDEKVYASLAIGYPDLPNDL NRREIEPKGYPVTYID >gi|292596540|gb|ADCV01000008.1| GENE 142 188799 - 189317 689 172 aa, chain + ## HITS:1 COG:VCA1005 KEGG:ns NR:ns ## COG: VCA1005 COG1846 # Protein_GI_number: 15601758 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 17 160 11 152 152 115 44.0 5e-26 MAEIGVLEGYKHKEDVPDSEYLRLENQLSFPLYVVAKEIVNAYRNHLDPLNLTYTQYIVM MALWQYGDLSVKELGQVLRLDSGTLTPLLKKLEAKAFLKRKRSRQDERVVMVTLTDTGKE LRDVAVHIPRRLAEASGPIFDVEETRQLRMLLNKLLEAIDNANAKTAENMKG >gi|292596540|gb|ADCV01000008.1| GENE 143 189472 - 189870 473 132 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1777 NR:ns ## KEGG: Vpar_1777 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 132 1 132 132 241 97.0 5e-63 MNKNLLGAFVLAGTLLVGGVANAANWNGLANYPEVPNSANGTETYFFDKASEFKGIDSSR NNVFGVNVINMHNNQYGEATLFKYLVNPSLHTVYRYAPDGQVYQIQPGTNEFNMFMAAWK EVYGTTFEFPAL >gi|292596540|gb|ADCV01000008.1| GENE 144 189960 - 190730 1013 256 aa, chain + ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 1 247 1 246 250 241 48.0 8e-64 MSKSEFAQAYTERMFPDIAAPAGYIDPEFEVLFDNFAFDEVITEEGRNVPAKDRFLAILA TLVGASAVDEYALMLPAALNFGLIPDEVVELIYQAVPYLGIGRVRPFFKVTNKIFDYRGE AIVDPSRSTITGESRLEKGVEKQVEIFGEPMRNSYQEGPEDIRHINKWLANMFGDYYTRK GLSVAHREMITFCFLAAQGGCEAQLKAHVEGNLNVGNSKQYLINIASQCVPYIGYPRTLN ALRCIQEGYTAWEAKQ >gi|292596540|gb|ADCV01000008.1| GENE 145 190740 - 191366 589 208 aa, chain + ## HITS:1 COG:CAC2628 KEGG:ns NR:ns ## COG: CAC2628 COG1994 # Protein_GI_number: 15895886 # Func_class: R General function prediction only # Function: Zn-dependent proteases # Organism: Clostridium acetobutylicum # 10 207 11 216 216 102 36.0 7e-22 MFDLNPVQILASIPAIMIVFSIFGYAEAKVVTWFGDPTPRLAGRLTLSPMAHLDLIGTIC IILVGFGWAKPMSINPSYFKDPRRDISLLAFAGPVAGLIAGFIFTFIYMLLGKLGLMESQ GLAMVMQYIILYSIGLSIFCLIPFPPLPGFNIILPWLPTEWQMRYYQLGMLNLLFFIILI NTPIISMVIRPLQQTIFKIYFAIIGLIL >gi|292596540|gb|ADCV01000008.1| GENE 146 191709 - 191942 380 77 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1774 NR:ns ## KEGG: Vpar_1774 # Name: not_defined # Def: BFD domain protein (2Fe-2S)-binding domain protein # Organism: V.parvula # Pathway: not_defined # 1 77 1 77 77 138 98.0 6e-32 MNFEENQVPEAILDKLTKVCTCRSITRKTIKEAILDGAHTFPQVKEATRAGTGACGGKGC GPRIVKLLAEMKEQGKI >gi|292596540|gb|ADCV01000008.1| GENE 147 192227 - 193372 1473 381 aa, chain + ## HITS:1 COG:BH0675 KEGG:ns NR:ns ## COG: BH0675 COG1472 # Protein_GI_number: 15613238 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Bacillus halodurans # 49 380 131 477 686 176 33.0 5e-44 MFRRFVAATMIGALALTTGCGLHNPFTSKAEPVTYESVAQSELSPEQKVDKLVANMSDAD KVGQLLMIGIHGTTLNDDAKFMLNEYRVGGIILFDRNMESKYQVKTLIADINKAGKSAGL TPLFLGIDQEGGAVARMDDKLIKVPPAEELGKTSVEQAVSLAKQSGAELKDLGFNINFAP VADLGLTYGRSYSTNPDEVVRYAGAVSKAYDEAGLWYSYKHFPGIGKTDVDLHADTSIVP VSRKTLLSEDTKVFIDLIKQSKPNTYTIMVSHAMYPQIDPDHPASLSKAIITDWLRKDLG YNGVVVTDDMDMGALANHYTFGDMAVQSILAGSDILLVCHEYEHMQEAYNGLMKAVKDGR ISKERFDESVKRILLMKMSKI >gi|292596540|gb|ADCV01000008.1| GENE 148 193515 - 194666 1557 383 aa, chain + ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 381 2 381 383 447 59.0 1e-125 MARRIMLNGTSYFGQGAIQEIVNEIKNRHFKKALVTSTPDLFEFKVATKVTELLDAAGID YEIYDGIKPNPTIENVTAGVEACKAAGADVIVAVGGGSPIDTSKAIATIITNPEFADVRS LEGLAPTKNPCLPIIAVTTTSGTAAEVTINYVITDVEKNRKFVCVDPHDIPIVAIVDPDM SASMPTGLCAATGMDALVHAVEGYITKGAWELTDMLHLKAIEIIGRSLRSAVAGDYAGRE AMSLGQYIAGMGFSNVGLGIVHSMAHPLSAVYDIPHGKACAMLLTAVLKFNAPATGEKYR EIARVMGVPDVDGMNQETYRQAAIDVIQKLADDVGIPKSLSEAGVKREDIPFLAESAFND ACTPGNPRDASLEEIIGIYESIF >gi|292596540|gb|ADCV01000008.1| GENE 149 194965 - 196509 1086 514 aa, chain + ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 26 501 16 495 512 257 34.0 3e-68 MKLWKFNKRSSTLADMSMNRVLLTELIAKGALVGVIAGFFGASYRYLILESEHIRWHLMD DITMEWAIGWLMVMVIFAFIVDRLLAWAPLSGGSGIPQIEGEMLGLFDMKPYRTLVSKMI GGVLTGFAGFSVGREGPAVQIGGSAGKIVSYWMNSGLREQRILTSAGAGAGLTAAFSAPV SGAMFVFEEVHKSFYPYLVVPTFVATLISNYITVSIFGLTPALGFTVTSGVPLEYFPILL MVGVIMGLCGVLFCRMIFAFKRFFDWLKCSRFLKLALTFVAVAAIGFDSQLLLGGGNDLV GQLAFQSHGVLLLGGIVLGKILLTTFCYGSGAQGGIFLPMLVIGAATGAFCESLLSTLGL ISPDFVPQFVICAMGGMLAAAMRTPILAILLVLEMTDSFSNIYAIGIVTLVAYLVAELLK EPPIYDSLLQAMSGQSNLESVQTFFQTKVPVVANYTDVQLQDLALPDGTLIVSIRRNGTY IVPLGDVKLEPGDELQVSCERGRLKAAKAYFQSN >gi|292596540|gb|ADCV01000008.1| GENE 150 196522 - 196971 275 149 aa, chain + ## HITS:1 COG:MA3114 KEGG:ns NR:ns ## COG: MA3114 COG0454 # Protein_GI_number: 20091932 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Methanosarcina acetivorans str.C2A # 1 148 5 152 166 71 32.0 4e-13 MKIVKATESDILELYQLQLLTFESEAEMIGSRMVPALMESEEEFKATFTQWHTYKLVDDG GRIIGGIRYQYDDGVVEVGRLMVHPNHRQQGLARKLLVFVDEQCSQDRRVLYTCTKSWIN IKLYTKMGYKAVREIQDETGLSFVYMEKQ >gi|292596540|gb|ADCV01000008.1| GENE 151 196997 - 197791 817 264 aa, chain + ## HITS:1 COG:BH3454 KEGG:ns NR:ns ## COG: BH3454 COG0730 # Protein_GI_number: 15616016 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 9 257 3 267 273 100 30.0 2e-21 MLDNIVVFYIFFTIVGFLAAMIGTIIGAGGGLVFVPLFMYWFPEWSPSMVVGTSLFSVMC NAISGSIAYLKQKKVYINAAIIFSLATFPGAILGAQMSGWFSGKGFMFAFGCFMLCASVL IGFKNFRKGERKEESLTLEQLSYSKPIGISISFFVGFISSIFGIGGGLIHVPALIYLMGF PTHMATATSQSILAVSTTVGVITHLIESHIIFSIAIPTSIGAIFGAQVGARIAKRLKAKA ILALMSIAVFALAVRLILKSGILG >gi|292596540|gb|ADCV01000008.1| GENE 152 197937 - 198017 61 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRMKNLKYINHTIFMHNVGNVFTIEL >gi|292596540|gb|ADCV01000008.1| GENE 153 198290 - 201112 560 940 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167010850|ref|ZP_02275781.1| ribosomal protein L36, putative [Francisella tularensis subsp. holarctica FSC200] # 504 939 2 436 436 220 31 7e-56 MSTLIRDYERFAKEANEICKGRVYTDHLRRYAYGVDASCYSYLPKVVVKAEDEREVRRLI RLCQQCGTPFTFRAAGSSLSGQCSSEDVLIVCNDGFKKMEVIDDGKALKCECGVIGSDAN DLLKPYNRKIGPDPATLATALVGGILNNNSSGMCCGTAQNSYKTIRSIRVVLLDGSILDT SDQKSIDQFLKEKPQMVEDILQLRKDILADEELTHLIHHKYKIKNTTGYGLNSLVDFEDI IDIINHLFIGSEGTLGFVSEIVYNTVEDVPYKGCGLMFFKTLNDASLAVVALANMGRDKV VAAEMMDYQSLKAVQALDNVPDFVREVPEGTSAILFQTESYSKETVDENLAFIKDKLKDI PTAIPSLYSQDPKEYDSWWAIRKGILPIVGGQRRKGTTVITEDVCFQIEDFTKGIEMLTE LFHKYDFVDGGVIFGHALSGNVHFNITPDFSDPKDTKNFGDLVKEMSERVSGFGGSLKAE HGTGRMVAPFIEMEWGRKAYEINRRIKAIFDPERILNPDVIITDDPDVYKKNLKAQCVID DAFTICMECGFCEKHCPSRNLTLTPRQRIALLRETKRLENEGNFTLAAELKKGYEYFGVD TCAACSMCKGLCPLSIDTAQIALSMRRINPPAPELAKKIYDNFPTTLQMARAGVSLEGIA GSIVTQKAISKITEGLHGVTGITPYIPKTTPKANRYRLRSRIKPTNFEKVVYFSTCANRA FKPNQGYDDERSLQQVVESLCNKAHIDIIYPQHIENLCCGLSFENYDDVHERAVKDLHDA LMQASQNGKYPIVIDHSACFNHAFKYMPDLEINDISEFLCKYVVPHLDIEKCDERVIVHK QCKIKSLNKSQYIEDLARLCTDHVFNIKSFACDGFAGQKGFFTPELNKSATKDLAAEIAE YGATLGVSSSSTCEIGLGENGGIPFVGVAFLLDRCSKAKK >gi|292596540|gb|ADCV01000008.1| GENE 154 201396 - 201503 67 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQELFYALWGTLLAPIIVALVVTTYSYWLNNKNKK >gi|292596540|gb|ADCV01000008.1| GENE 155 201589 - 202236 615 215 aa, chain + ## HITS:1 COG:TVN1204 KEGG:ns NR:ns ## COG: TVN1204 COG0457 # Protein_GI_number: 13542035 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Thermoplasma volcanium # 58 189 45 176 510 60 30.0 2e-09 MKKFVLFFLLIIALTGCGLNQNTNSNKTESNATSSATGTGSSTSAAGNSQATTKQDDHLI TAKQALSVGEYAKAIEEATASIKQDANNGEAYSVRGFATALNGDAAKGLTDTKKAYDLDP SNVANYYNMAMVYKLQGQLNDSKQWFEKVLEKDPSNTWSVYGIATIYADQGDDTKALDWL EKAIKIDPSVKAVAAEQDHFERFHNNRRFKTLVGL >gi|292596540|gb|ADCV01000008.1| GENE 156 202239 - 202652 201 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238018314|ref|ZP_04598740.1| ## NR: gi|238018314|ref|ZP_04598740.1| hypothetical protein VEIDISOL_00138 [Veillonella dispar ATCC 17748] # 1 137 1 137 137 154 78.0 1e-36 MDVKQVIRLIIKVIGFIYWLIFLYLGGLMVVDWSGFMTRYNIETPIFLSYIVVVGCIVMP YLVFYWKKLNPNVKPPYLVRCLSAYMNRLEDQHSIWFDVLYVLKLLLYFVTILWMICILL LILAAIAWTIVLILLSN >gi|292596540|gb|ADCV01000008.1| GENE 157 202662 - 203039 374 125 aa, chain - ## HITS:1 COG:SP1786 KEGG:ns NR:ns ## COG: SP1786 COG1598 # Protein_GI_number: 15901615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 125 1 148 150 63 28.0 9e-11 MKFIYPAIIHDDADGFWAEFPDLEYTSSTGSTLTELITNAQEAMELYILGALEDGQTLPT PTSIRSLPCTDTTYPTLVQTDIDLAKNSKSVKKTLTIPAWLNDRALAKGINFSQLLQEAL VEKTM >gi|292596540|gb|ADCV01000008.1| GENE 158 203049 - 203225 249 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794290|ref|ZP_06759426.1| ## NR: gi|294794290|ref|ZP_06759426.1| toxin-antitoxin system, toxin component, HicA family [Veillonella sp. 3_1_44] # 12 58 12 58 58 82 100.0 9e-15 MKDKDLLKLLLQNGWKDVRQRGSHHRLKKDDQVEVIAVHGKDVPIGLLNAILKRTGLK >gi|292596540|gb|ADCV01000008.1| GENE 159 203473 - 204372 945 299 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1765 NR:ns ## KEGG: Vpar_1765 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 299 1 299 299 534 99.0 1e-150 MKPFGKRVVMAVLCAATLTSPFFLSGCSMSELWQGTEQSRKEIAQRSEQDQVQLFNQYVK AVSRYNRMAVMFDYANTPTLNELKAGQHLTVFNAPNFKQLQKELEEAKQAGIPYDEMKEP LDKLLSKLNEITPVAEELDAYYKSKGYTTDNYAKEQQLGPKYVQLYEQFVPIYADFDNVM HKINTDRLQQRLQQLRDAGKKNAAAAQEVHLRLTAVLEKIDSEKQLDVNAINQELQAIGD VSNGITSPKYDSVKTSVNSTIGAIRTYMGSKQDNDYNRMIEAYNHYISNLNTTNMNELD >gi|292596540|gb|ADCV01000008.1| GENE 160 204466 - 205362 582 298 aa, chain - ## HITS:1 COG:SA2487 KEGG:ns NR:ns ## COG: SA2487 COG2962 # Protein_GI_number: 15928281 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Staphylococcus aureus N315 # 1 293 1 294 302 193 41.0 3e-49 MDHTSKKGLITALSCYIIWGLLPLYWALLNHVSPYNILAQRIIWSGICMAIVVFGLHFKQ FKKDFQLLKEQRSQLFLLLVAAVIISVNWFTYIWAIANNQVMNTSLGYYINPLFNVVLGV ILFKEVLSIPKKLSVLIATIGIALLTYQVGSLPLVSMILAVSFGLYGAVKKKLLISPFTS IAFEAWLLTPLALLYTTMVDNTVWSYFGTDWYTTILLIACGLTTSVPLVLFSYGAQLLPL NLLGFLQYVSPTIALLLAIFYFGESFGTPQMIAFGCIWIALVLFSLSSQITTRISLKK >gi|292596540|gb|ADCV01000008.1| GENE 161 205997 - 208159 3360 720 aa, chain + ## HITS:1 COG:BH2956_1 KEGG:ns NR:ns ## COG: BH2956_1 COG1884 # Protein_GI_number: 15615518 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Bacillus halodurans # 20 519 10 496 525 346 40.0 8e-95 MSDKKTSKDAERDLLAPVSFDEFKKPTYEQWQAEVEKALKGGDFHKKMFTKTYEGITLQP IYTPALHGEKIPKGVYPGAGEFLRGTKASGYIKDSWGVSQYVDESFPKDANHASLYEIVK GGTIHNIRLDEATRHDQDVQVGAAVGIGGTSLSTMDDCSQLIERFNLKENPLYIETGASA AILLGMLAATVKGSKKQTSDLKGLVGADPIGVWAKDGTLHMSLDTAFDEMAHTVVWAKEQ APELKTVLVSGDVYANGGANDVQEVAYALATAVCYVRQLAQRNIDIHTIANSMMFTFSLG ANFFMEIAKLRALRVLWARIMEAFGAEEADRAVHVHGRTSAFTKTVYDPYVNLLRNTTQA FSGVVGGLNSLEVSPFDQPIRKADDFSRRIARNIQVMLQTEFELRQPVDPVGGSWYVETL AAELCEKIWAEFQTIESKGGIIAALKEGYPQAQVKAVLDERFKNLAFRKDVAVGNNMYAN MTEELLDPKPENQETLRQKRVAQIEEYLASAEPDAVVKAQATLEAGTTEPGALIGLIELG ALQKLTIRQIRKALDAGDIASETIESIAAHRWTEQFEALRMRTENYKQRTKDNVKVFLAN MGPIPQHKPRADFSTGFFEVGAFEVIKNDGHETTADAAKAARESGADVVVICSTDDTYPE LVPPLAKELKETMPHVTVILAGAPPKDLEPVYREAGVDDFISVRANCYEILNTLQDKKGM >gi|292596540|gb|ADCV01000008.1| GENE 162 208164 - 210353 2938 729 aa, chain + ## HITS:1 COG:BH2955_1 KEGG:ns NR:ns ## COG: BH2955_1 COG1884 # Protein_GI_number: 15615517 # Func_class: I Lipid transport and metabolism # Function: Methylmalonyl-CoA mutase, N-terminal domain/subunit # Organism: Bacillus halodurans # 3 595 2 582 582 912 75.0 0 MFKNPDFSSLGLGSQTATSRDAWLAELQKETGKSFEDLYNTTMEQIQLKPLYTEMDYEGM THLDYMAGVPPFLRGPYSTMYVTRPWTVRQYAGFSTAEESNAFYRRNLAAGQKGLSIAFD LATHRGYDSDHPRVVGDVGKAGVAVDSILDMEILFSGIPLDQMSVSMTMNGAVLPVMAFY ILAGEEQGVDKKVMAGTIQNDILKEFMVRNTYIYPPATSMRIIGDIFAYTSQYMPKFNSI SISGYHMQEAGATADIELGYTLADGLEYIRTGVNAGLHVDQFAPRLSFFWAIGKNYFMEV AKMRAARMLWAKIINSFGSENPKSMALRTHSQTSGWSLTEQDPFNNVARTCMEAMGAALG HTQSLHTNALDEAIALPTDFSARIARNTQLYIQDETKVCKVIDPWGGSYYVEALTDELIR RAWGHIQEIESLGGMAKAIDTGLPKMRIEEAAARRQARIDSGREAIIGINKYRLDKEDPL DILDVDNTAVREAQIRRLEQLRANRDEEKVQSCLEAITKATESGEGNLLALALEAARARA SLGEISFAVEKVCGRHKAVIRSISGVYSSEFEDDDVIKEVRQMADNFEELEGRRPRIMIA KMGQDGHDRGAKVIATSFADMGFDVDIGPLFQTPEETAQDAVDNDVHIVGFSSLAAGHKT LLPQLVEELNKRGRGDILVAIGGVIPAQDYEFLREHGAVAIFGPGTVLPVAAKKLLETLT SHVQDESHD >gi|292596540|gb|ADCV01000008.1| GENE 163 210346 - 211599 1228 417 aa, chain + ## HITS:1 COG:BH2954 KEGG:ns NR:ns ## COG: BH2954 COG1703 # Protein_GI_number: 15615516 # Func_class: E Amino acid transport and metabolism # Function: Putative periplasmic protein kinase ArgK and related GTPases of G3E family # Organism: Bacillus halodurans # 88 417 5 334 340 385 56.0 1e-106 MTDNKRPTPDELRNTQDATFTTGEGKAPELGVKNASTEGSTYRPDWVPEEAKKDDTYACH VMKGVKEMHDGLLSSSAHLAPAVRPVQRRKKLTVADYVRGIEQGDRVILSRAITLVESNN KDHFKLAQQVLQAVLPRTGKALRIGITGVPGAGKSTFIEAFGNMLIEAGYKVAVLAVDPT SQVTKGSILGDKTRMETLTKHPEAYIRPSPAGGTLGGVARKSRETMLLCEAAGYDIILVE TVGVGQSEVTVRSMVDFFMLIVLTGAGDELQGIKKGVMELADAIVVNKADGDNLKRALIA RSDYDRMLHYIRPATEKWKTQAYTCSAVTKDGLDELWDVIQEFTEQGKENGVFLKRRQEQ SLRWVRDMIDEHLHNLFFNNVVIQGRMGEVEAAVLDGEMSESQAVEELIGVFDKSLQ >gi|292596540|gb|ADCV01000008.1| GENE 164 211960 - 212217 333 85 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1759 NR:ns ## KEGG: Vpar_1759 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 24 85 24 85 85 93 98.0 2e-18 MNKKLLLPVGVVVLIIGIAILLLNPDPGAANLEIARNATNAQAAAKAISENNQSYTLWYS IGMFCSGLGIALSVGGFIVGFIKKD >gi|292596540|gb|ADCV01000008.1| GENE 165 212251 - 212493 88 80 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1758 NR:ns ## KEGG: Vpar_1758 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 80 1 64 64 90 78.0 2e-17 MYIISSAAFLYFNFRVIGQNVLVLPYNPNFILWTLASLCLSSELVYIYLASHPISIYVVV LRSISVFGGIKRGIINPDRA >gi|292596540|gb|ADCV01000008.1| GENE 166 212498 - 213124 664 208 aa, chain + ## HITS:1 COG:XF1079 KEGG:ns NR:ns ## COG: XF1079 COG0811 # Protein_GI_number: 15837681 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Xylella fastidiosa 9a5c # 14 201 4 196 220 80 31.0 1e-15 MWLLEVSMSSIAHLFVAGGFVMYPLVIFLLFTLMIGIERIFLYRKFTKDLRRFNKVLEKN QSWIMLPSVLERDTEELGSLFARAIRNAKNYNGLENRLQDVVSYADERLKRGLSWLSMIV TMAPLLGLLGTVLGMIRAFAVVGGDIGAPTIITGGVSEALVATATGLTVAIIALGFHSYC AAKVNDSVATLEHECGNILDAYNEEHDI >gi|292596540|gb|ADCV01000008.1| GENE 167 213121 - 213525 390 134 aa, chain + ## HITS:1 COG:slr0678 KEGG:ns NR:ns ## COG: slr0678 COG0848 # Protein_GI_number: 16329551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Synechocystis # 11 131 36 156 269 87 34.0 4e-18 MRRRTLGVKKEPTIMIIPMIDIVFFLLVFFMVGTLYMNTEQQIPLNLPSASTSTAKSIEP ITITLTTTHTLYIDNQEISSDRLAQEVKSIVTQAPQQAFVIRASKDVYYNDVIELLDMLK VNGAKYISVATERK >gi|292596540|gb|ADCV01000008.1| GENE 168 213530 - 214360 976 276 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1755 NR:ns ## KEGG: Vpar_1755 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 276 1 276 276 478 93.0 1e-133 MFESHYLKPFIISLGITIMLISGMGLSLRGIVGTGVAYDAAEVSFHLPEDSESDAKTTAI EPIPKDKPPVEPPTPEGPAPKADPLVTENTGDESAHNLNANKTTSNARREWAVPKAIESE TTNNEQAVVTGGNDSKYGKSSKPDNAPIGKDITSDPNANGNGFAEASDLSFLSDLAWGLL TPGQQALLQKSDINPQEYLRTVQEQGKGSIVTGKVVVRVNFDVNGHVIVGEHTPLIAEDV PQPVKEEAMRIVKSSGSIINRRGEPVYLAVPVVLGQ >gi|292596540|gb|ADCV01000008.1| GENE 169 214515 - 214925 481 136 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1754 NR:ns ## KEGG: Vpar_1754 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 136 1 136 136 204 95.0 7e-52 MATLNRKERRAQRNESNTIGILLRLFFGLSFIGLAVVLFGEFDYNFIFSIFTADIVVSLI YVMTNKSRITTSLAVNTNVRVIIAFLIMLITMFFYAFALWRADQFSTPMQVTLFIGGAIV YLAVFNSTKTILTNQN >gi|292596540|gb|ADCV01000008.1| GENE 170 215106 - 216053 872 315 aa, chain + ## HITS:1 COG:no KEGG:Acfer_0716 NR:ns ## KEGG: Acfer_0716 # Name: not_defined # Def: peptidase M48 Ste24p # Organism: A.fermentans # Pathway: not_defined # 59 300 54 285 289 87 26.0 8e-16 MIQVILTYIVNVIIVFVFFPILESVVQYVYPFSWDWLIKPLHLVDKLDVYIIISFALPII VAIGLFLPPFSWIVHVLQGERKPNAEESEYIEPLFEELCAFSGVARNSLILRMRTDEEIN AFASGLNHITIYTGALYSLDKRHLLGVLAHELGHLRHRDTIYLTITYAMDRLGQLILNLV IYLNFALNILAIIPIVNIVVRIIQLILIVMIAIVKYVLLLPKWITYYFDSRRREYAADAY AVSIGLGRELRDGLVSLGLATEQIGILENGELYDCESTGFFSRLFITHPKMIKRIQRINE GIEVYNLKQSLKENR >gi|292596540|gb|ADCV01000008.1| GENE 171 216200 - 217495 1843 431 aa, chain + ## HITS:1 COG:BH0625 KEGG:ns NR:ns ## COG: BH0625 COG0015 # Protein_GI_number: 15613188 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Bacillus halodurans # 1 431 1 430 433 490 58.0 1e-138 MIPRYTREEMGHIWSERNEFDTMLLVETLASEAQAELGVIPKEAAKTIREKGNFDVERIH EIEKETNHDIISFVTAVGEYVGPEAAKYIHLGLTSTDVKDTALGYMMKQACDILIDDLKR LHEVLRRRAAEFKYTPMIGRTHGIHGEPTTFGLKLALWMAEVERDIERMEHARKSVAVGK LSGAVGTYSNIDPFVEQYVCEKLGLEPVKIATQVVQRDRHAELLSTIAVVGGTLDKIALE IRHLQRTEVREAEEYFSPKQKGSSAMPHKRNPITCERICGMARLLRGYAQSAYEDQALWH ERDISHSSVERVILPDATISLNYMLHLTIRTIDKLLVYPETMLKNLNLTGGLVFSQTILT HLVDKGAVRDEAYRWVQKHAMERWLEGKDFATGLKADENIKKYMTDEEIDACFDPYKLLR HVDTIMARFGL >gi|292596540|gb|ADCV01000008.1| GENE 172 217726 - 218901 1247 391 aa, chain + ## HITS:1 COG:BS_yfnC KEGG:ns NR:ns ## COG: BS_yfnC COG0477 # Protein_GI_number: 16077799 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 12 382 28 394 409 110 27.0 4e-24 MKRIIRKYGPPIFHCINDFGQGSLAALIPFFIANFGLNYYQSASIIFCNTVVASVAQPVL GYVADRWRVPWFIPVGFTVTLVSISAMALATSYEMILALSLLAGVGAALFHPEAALLVNC TQSHEIGNAMGRFAVGGSAGFALGPFIAGGVYVFGGQFLWVFTLIALLGVLLYLYAFMGE GEATDDTDIADVADAGNRESRAKVLSTGTNDWVSFGKLFFVIASRSILFSVLAIFIPILY ITVINGEASASSLALTAYFAMGAVLTYMGGALSDRLGFLKTVRLGNLIFLPSVLVFIFVP NLWGFFGAMIPMAFGVFSQYGPITVLGQKYLAKNAGFASGITLGLGITLGGLVAPYVGHL ADIYDVQTALMTLIPVGVIGLLMSFWLKEPK >gi|292596540|gb|ADCV01000008.1| GENE 173 219093 - 220376 1723 427 aa, chain + ## HITS:1 COG:BS_purA KEGG:ns NR:ns ## COG: BS_purA COG0104 # Protein_GI_number: 16081094 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Bacillus subtilis # 1 427 1 427 430 484 53.0 1e-136 MATSMVIGTQWGDEGKGKIVDWIAERADVVVRSQGGNNAGHTVVVDDKAFALRLLPSGIL YDNKQNIVGTGVVIDPKVLLQEIEGLEKQGRSAKTLQISDRAHVIMPYHIALDTAEEASK GDAKIGTTKNGIGPCYADKINRIGIRICDLYDMEAFKQKLAYNVEFKNKMLTKVYDAEPV NYDEILADYIKYAEALKPYVTDTNAAVLKAVKEDKKVLFEGAQATMLDLDHGTYPFVTSS HPIAGGASTGAGVGPNYLKNIFGVVKAYATRVGAGPFPTELLNETGDNLRELGHEFGTVT GRPRRCGWLDLMVVKYAAGLNSLDYLAITRLDILDTFKELKICVGYKLNSKDVEGFPANL KDLEACEAVYETLPGWETDISGIREYDKLPENARKYVERIAEVTGVPLGIVSVGPNRSQT IDLVNVF >gi|292596540|gb|ADCV01000008.1| GENE 174 220916 - 221260 334 114 aa, chain + ## HITS:1 COG:pli0036 KEGG:ns NR:ns ## COG: pli0036 COG0640 # Protein_GI_number: 18450318 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 4 102 1 99 121 94 42.0 6e-20 MVEVSYERLATIFKALSDETRLHIIDMLSCNELCAADILASFNLSQSTLSYHMKILIDAG VVNSQRNGLWTRYSINEATFADILDILPQLYKTKDECICAQIKYCRISEHEKEA >gi|292596540|gb|ADCV01000008.1| GENE 175 221263 - 222795 1182 510 aa, chain + ## HITS:1 COG:lin2082 KEGG:ns NR:ns ## COG: lin2082 COG0389 # Protein_GI_number: 16801148 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Listeria innocua # 3 320 5 322 356 239 39.0 1e-62 MRRWIMHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPIS RAKKLCPDGIYVYPRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPK ALGQAIKDRVFEQTGLIISAGLAPNKFLAKLASDLDKPDGLVVIPYGREKEVLAPLPIKR IWGVGPRTEKILKAGGFHLIRHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPVETERK TQSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFTTVSRQ KRLDTPSDHEHVFFETALLLWNKLMQDKMSKNPKGTKKDVEALGATMKVKSTDFRYSSSK DNRSNHIGSKYSTSKYSSSSEITFMDPPGPIRLLGLTVSGLDEEVPMQDSLFESPQDKTE DKLSSVLDSLESKFGETAVMSGALWQRFHGDNGIRRKRSELKAAVDAQPDQEDGESINVD VVSTKEANRSTIADTQPSIEGPKKTVKKDL >gi|292596540|gb|ADCV01000008.1| GENE 176 222884 - 223168 426 94 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1746 NR:ns ## KEGG: Vpar_1746 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 94 1 94 94 182 100.0 5e-45 MSLFRVAIHYGVNSNGFLSYDTETKTVSVDLPEQEWVDKVIAYLNNEHAIEHATGLDTYE RLTVKPLESLDNLKLALTRMWEAIDVQVDWSRPA >gi|292596540|gb|ADCV01000008.1| GENE 177 223484 - 224947 1896 487 aa, chain + ## HITS:1 COG:HI0928 KEGG:ns NR:ns ## COG: HI0928 COG0753 # Protein_GI_number: 16272865 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Haemophilus influenzae # 7 482 15 490 508 719 71.0 0 MNNEKKLTTAFGAPVPDNRNSATAGKRGPVLMQDVWLMEKLAHFEREVIPERRMHAKGSG AFGTFTVTNDITKYTKAKIFSEVGKQTPLFVRFSTVAGERGAADAERDIRGFAVKFYTEE GNWDLVGNNTPVFFIRDPLQFPDLNRAVKRNPKTNLRDATANWDFWTSLPEAIHQVTIVM SDRGIPKSYRTMHGFGSHTYSLINENDERVWVKFHWVCQQPIENLSDAEAANVVASDRES HQRDLFEAIERGDFPKWKLCIQVMTEEQANNMPYNPFDLTKVWYHDEFPLIEVGVMELNR NPENYFQDVEQAAFAPTTIVPGISFSPDRMLQGRLFSYADAQRYRLGANYYQIPVNAAKC PVNIYHRDGQGRIDGNHGSTIGYAPNSFGEWAEQPEFKNPPLDVSGPAYQYDFYEDDSDF FTQPGKLFRLMSPEQQQVLFDNTAAAMNGVPDFIKERHAKHCYQCDPAYGKGVAKALGMN IDFSDVK >gi|292596540|gb|ADCV01000008.1| GENE 178 225307 - 226299 961 330 aa, chain + ## HITS:1 COG:SPy1882 KEGG:ns NR:ns ## COG: SPy1882 COG2503 # Protein_GI_number: 15675700 # Func_class: R General function prediction only # Function: Predicted secreted acid phosphatase # Organism: Streptococcus pyogenes M1 GAS # 91 311 48 264 284 141 35.0 2e-33 MKSSSLAWYVMVACIGGSLCLGSVVQANSPATVKANNSVPAAIVMQAQVAQPVTVTADKN DKVSATANHTVTNNVVTNDVAAQEALKQKQQYQAETETMGLLWMRTSAEYRALAYQGYNV AMNAVKMAVTDPSHQRKPLAIVLDADETVVDNTQLMGESIANGNGRFDAPWWRQAVHQGK SQAMPGAVEFLNEVHKQGVEIFYVSNRYAPVNLDVTIQNFKELGFPSVDKDHVLLFEKDS DKQPRFDMIAKKYYVVVYMGDNAGDFPIGTKGKTLAERNAIIDNHKEDFGTTFVVFPNPA YGSWVSALAKGYQNLSPEEQKQVNNQYLQQ >gi|292596540|gb|ADCV01000008.1| GENE 179 226687 - 227517 599 276 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1739 NR:ns ## KEGG: Vpar_1739 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 276 1 276 276 494 89.0 1e-138 MSFYNWIQEKLFDDYEEWRLKCPDYNRNGFNIVGIDNTLKAMHDGFFMYMELYPPHAING CTAMKARVGKTQDAVDIFLERDGKMYRMADVSYPDAVKMMRAFVKKRRVPDCSLCVEVAN LDIEQMKPTFTELAMLLLGDAKQAKSFMTEAKLRSMEELEDSWWNLYEKLVSKGYAVELS CKCELEDFIHNVQKLIRNKSLDTSENLTIDTAALDEDQCITDWSADLNATWETYKLVGMD IGTDSFVLMVLSNEEFKTAQELAKELLHRINVAERL >gi|292596540|gb|ADCV01000008.1| GENE 180 227569 - 228384 690 271 aa, chain + ## HITS:1 COG:CAC0781 KEGG:ns NR:ns ## COG: CAC0781 COG4296 # Protein_GI_number: 15894068 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 90 271 95 276 276 65 31.0 2e-10 MSIVRLPEYEAEFEPEEFEIYALPRSDANGASPYLEKYHRPLVSTDAILDTRTGVLDRSE GILTWIIEGLDDRWGYSFEPHGVYKLLVKKAKPLEDLGYMRPSWNNRYYVLEVLEEHAKH SELEALSAYLKTPKYLHTDRGDFLLNREYQYYTARIDDYAFTLDVDEGSDESCTIALAAF NTIDNFKEFEQRISTYISEKLLDLANDWLDNDDQNPITSDVFAKRITMGELAFRNDGTIE VYYDDDDIFWGHCIIAYIDADGNPIDADIAG >gi|292596540|gb|ADCV01000008.1| GENE 181 228405 - 228836 430 143 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794312|ref|ZP_06759448.1| ## NR: gi|294794312|ref|ZP_06759448.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 143 1 143 143 283 100.0 3e-75 MRKSELMTLWNVESWSEEPYGVYFVSRRLGINRLENEGQAFKKLNISCTGYTEDDVLSLS IWEQLYVQLDELDQLAKGLIQKGIPQEESVVLTLTDIMLDKSGCYDAFALGYDVGESPAG HLYVLVPFDENFTAQQDVIYETL >gi|292596540|gb|ADCV01000008.1| GENE 182 228908 - 229414 448 168 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794313|ref|ZP_06759449.1| ## NR: gi|294794313|ref|ZP_06759449.1| hypothetical protein HMPREF0873_00912 [Veillonella sp. 3_1_44] # 1 168 8 175 175 297 100.0 2e-79 MEDMYKLVKDFFSHDMDLDDLFDSEAIIWIDWREDDEDVVNYFNDMMDEPIDIQTVSNGK QYGDDIVLQKGNKKLLIPYGDEKDRDVTIKYFNDFVKPDYEVRWFAESLGDDTLGFTVLS GTEWLKLEDEFGADIVCYYFVPIDLESNMFNLRMSEVSALLELRENKR >gi|292596540|gb|ADCV01000008.1| GENE 183 229452 - 229994 557 180 aa, chain + ## HITS:1 COG:no KEGG:CLL_A2815 NR:ns ## KEGG: CLL_A2815 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 170 1 178 193 99 35.0 6e-20 MEYLKILHEDSNLAADFDALFDFFLLDEPTKRDEVEGRYTFSVDGVAFARDGAGGEYHQL EDGSIGYMSSEGECGRIAESIDDLICLLVYSICWHDYCDSSQYTDVGILESYAKERYAQI TSYTEMDEWETVVKALGMPSEANLAAVLQKFYDAAHREPVYQGFYHEEDGSITPYEGLFF >gi|292596540|gb|ADCV01000008.1| GENE 184 230067 - 230873 388 268 aa, chain + ## HITS:1 COG:no KEGG:TDE0536 NR:ns ## KEGG: TDE0536 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 1 265 1 265 266 369 70.0 1e-101 MAIDGVKIIDSDDGHDIYNAIVERYKDGISVDTIISEILGEEQNFCTDEFYTEIYWTAVA YSLWKIGHLPDDVKEKALNVIAKGPHEFWLDIDSKALKQRQKVLDKLALQLQSKNPKPLK VRKSKTKREPYFKVGDVLAVKFENEYGTIFVSEVDQSPRKIEYHLACTRLLQKEKPTMEQ FLNSKIACRKDNTNFGIDTDCWFNHKDLGLLLNNLEIIGTVELYPCKLWKLAPAGTLEDI YEEITDNPRIGKLRLIDTYELVKKVIQK >gi|292596540|gb|ADCV01000008.1| GENE 185 230932 - 231525 553 197 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1736 NR:ns ## KEGG: Vpar_1736 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 196 1 196 197 284 78.0 1e-75 MDTVTKQYIETVKVSDIPWHRLTTTYGRATDFPTELDVLWSMKSIDAVDAAGEALAMNIE HQSTLWHATPFAMIFLLRIFKKALEERTQNEVAHYLAEQLVDLFTVIAECIRDGLVLEHA DPLPHFVDMLNEEYLWSEEYDEDEDVLRYEEEDVFPDDLFFSFYYYSLEVLLLAIPLLDK SHEGEANLLDLLTEIEY >gi|292596540|gb|ADCV01000008.1| GENE 186 231610 - 232116 485 168 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1735 NR:ns ## KEGG: Vpar_1735 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 168 1 168 168 219 74.0 3e-56 MGLIANYSCLSDANLKELKAMGSEEEGILDSVEEWGENDELLLDIDKMWDVLHFVLTGVG TDHKDDNNSLSQAVLSVTAVEDVSDYVAYTEHNHLANIVVALEKFDIENALESFDMKACK EAELYPNIWDYDEEEEEIRDELIHDFEQMKRFYKQVLEANRHVLVSIC >gi|292596540|gb|ADCV01000008.1| GENE 187 232140 - 232427 332 95 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1734 NR:ns ## KEGG: Vpar_1734 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 95 1 95 95 146 91.0 2e-34 MDKARKKELLKAYADKQRQSFKDSLPMDEELFWNLFDYVDEKLEENDGCDHSLTFTREFL EKQKVDVEIVLDWIVNEGGGCDCEVLYNVEERFEE >gi|292596540|gb|ADCV01000008.1| GENE 188 232564 - 233130 538 188 aa, chain - ## HITS:1 COG:CAC0018 KEGG:ns NR:ns ## COG: CAC0018 COG2249 # Protein_GI_number: 15893316 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Clostridium acetobutylicum # 1 184 1 188 200 120 35.0 2e-27 MNILIIYTYPNHQSFNDAILKVVQQNLSKDHNVNTLDLYEEQFDPIMRFDDTHKRRDLST VPDMEKYRNLITWADQIIFIYPIWWSGMPAMLKGFIDRVFTAGFAYSYGKRGLIGHLQGK SAWIITTHNTPAFLTPFIQDYGKVLKNQVLKSCGIKPVTHTQLAGTENSSDEKRRRFLDK IANIAGSI >gi|292596540|gb|ADCV01000008.1| GENE 189 233366 - 233863 676 165 aa, chain + ## HITS:1 COG:PAB2090 KEGG:ns NR:ns ## COG: PAB2090 COG4720 # Protein_GI_number: 14520604 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus abyssi # 13 165 41 193 199 84 37.0 1e-16 MQHVQTRSTTSALVLTAVLIALATLFTMYTKIPVPGIRGYFNVGDVVIMTSALLLGRKYG AYIGAIGPALADLFLGYVVFVPITFVVKGLEGYLVGTVYKNKTTTSALVATIVGGIVIVA GYFIAEYFVFDSGVAIASILTNTIQAVMSVIISMILYAILRRRLA >gi|292596540|gb|ADCV01000008.1| GENE 190 234102 - 234488 210 128 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794321|ref|ZP_06759457.1| ## NR: gi|294794321|ref|ZP_06759457.1| putative N-succinylarginine dihydrolase [Veillonella sp. 3_1_44] # 15 128 15 128 128 204 100.0 1e-51 MVRVLYLFLLLVVLSPINAFADYQRDTLDIQRSLNEQIQSQLKIPAKVLKTKLNRDYSFA LQIKTDTQGRITSVELDPNESTSNDEIYLELVQSAKDTVWNIGYIDVKAELVFHVPINFI ISSNDDVN >gi|292596540|gb|ADCV01000008.1| GENE 191 234584 - 234655 193 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTVYEALSLMILFATLVVLILKK >gi|292596540|gb|ADCV01000008.1| GENE 192 234942 - 235043 82 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNAYEVIMIVLGILTVVISFGALIVLICRNNDK >gi|292596540|gb|ADCV01000008.1| GENE 193 235268 - 235645 438 125 aa, chain - ## HITS:1 COG:L35675 KEGG:ns NR:ns ## COG: L35675 COG0599 # Protein_GI_number: 15673958 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Lactococcus lactis # 8 122 6 121 122 123 50.0 9e-29 MKETRFNIGMNTLKQIDGLHGEEVYNTIQEISPAIAALLVELFGDIYTRPNLNFKERELI TLASLLTLGGCEAQLKVHTNAALNVGIAPEQIVEVCTHCIPYAGFPRVLNALFTVKAVFE ERNVL >gi|292596540|gb|ADCV01000008.1| GENE 194 235712 - 236074 301 120 aa, chain + ## HITS:1 COG:lin0806 KEGG:ns NR:ns ## COG: lin0806 COG0789 # Protein_GI_number: 16799880 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 3 120 5 123 123 78 39.0 4e-15 MKIGEFSKLVGLSISTLRYYEDQGFLHIERQNGIRNYHAEDVGFVQFVKRLKDMGMPLVN IKRYADLRYAGAHTARERMILLQEHYRFIEAEIKRLEGYKNNLEDKLKLYETLVKKNEIE >gi|292596540|gb|ADCV01000008.1| GENE 195 236201 - 236545 523 114 aa, chain + ## HITS:1 COG:SP1602 KEGG:ns NR:ns ## COG: SP1602 COG2824 # Protein_GI_number: 15901442 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Streptococcus pneumoniae TIGR4 # 1 114 1 112 112 139 62.0 2e-33 MANLPNCPKCGDEYTYEDGHMFICPMCGNEWTAADAQAAAEAGIIRDANGNELADGDTVV VVKDLKVKGAGVLKQGTRVKNIRLITDASDGHDIDCKIDGFGAMALKSEMVKKI >gi|292596540|gb|ADCV01000008.1| GENE 196 236646 - 237041 533 131 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1725 NR:ns ## KEGG: Vpar_1725 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 130 1 130 130 213 89.0 1e-54 MFNRVILLALLVSAMSPISSIAADIKPADKRNYELQQQISYNVIIPPEAFETSADGTLIV PIEVKTDDKGNIVAVEAGPNNWKLDREAYPIFEEAAKEAAWNTKHVDTDEALVVTIPVSI VMLPDTNSKKR >gi|292596540|gb|ADCV01000008.1| GENE 197 237052 - 237564 591 170 aa, chain + ## HITS:1 COG:BS_yutG KEGG:ns NR:ns ## COG: BS_yutG COG1267 # Protein_GI_number: 16080281 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Bacillus subtilis # 2 157 5 160 166 194 60.0 7e-50 METTKDLEKYTYDLLAERGVTLDDIAELVFYVQKPYMPNLKLEECRTSVASVLSKREVHN AIITGIELDKLTEQNKLSQPLQRIVANDESLYGIDEILAFSIVNLYGSIGFTNYGYLDKV KPGIIKKLDSEEGGRCNTFLDDLVGAVAAAAAGKLAHNEPNRVQHAIAEE >gi|292596540|gb|ADCV01000008.1| GENE 198 237779 - 238318 434 179 aa, chain + ## HITS:1 COG:L67226 KEGG:ns NR:ns ## COG: L67226 COG1335 # Protein_GI_number: 15672251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 1 175 2 165 171 146 46.0 2e-35 MQKVLVVIDMQNDFVDGALGSSQAQLIVDNVRKKIESFDGPIIFTRDTHDRDYLEHQEGK LLPVPHCVKNTEGWHIVDGLIEAAEGRSIMSPVSFVDKPNFASFELLTRLEGMDRVNPIE SITLIGLCTDICVVSNAIMLKAGLPEIPIHIDSSCCAGVTEESHQAALTTMKMCQCIID >gi|292596540|gb|ADCV01000008.1| GENE 199 238678 - 239307 673 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 6 203 5 200 201 263 63 5e-69 MKPFELAPLPYAYDYLEPVIDTETMKLHHDKHHQAYVNNLNAAIAKYPDLPYGCVDCILG DIANVPKDIRQAVINNGGGHKNHTMFWEIMTKPDTSKLQGPLKEAIDAELGGYDAFVESF STAAATRFGSGWAWLVVNKDGKLEVTSSANQDNPLLEGKKAILCLDVWEHAYYLHYQNRR PDYIKEFFRVINWDKVSENYEKALKPHHD >gi|292596540|gb|ADCV01000008.1| GENE 200 239736 - 241379 2140 547 aa, chain + ## HITS:1 COG:CAC1531 KEGG:ns NR:ns ## COG: CAC1531 COG2461 # Protein_GI_number: 15894809 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 152 538 11 392 405 188 29.0 3e-47 MEKKLDLSKSVYDLVKEYPEVADIMKELGFSEITNKVMLNSVGKIMTIPKGAKMKGVSMI DIVGAFMKAGFTLEGEMPNLSGDDAETAGHPGVAPTATATKSNVTDTSANVASSTVVANA VENSEPVSTTATANTDEDSETKAEDTVQDSERVEQLKGFLKRLGTGEDLGAVREDFASQF AHVEASEIMKAEQGLMREGTPLAEVQQLCDLHSALFHGSTIHEQMESEHAKVEAVLEAQE KSQSVVTLVETVGHPLNRLTEENKALDALIEATKVKVADKTATVDDVNEVRQVSIHYAKK GDLLYPHLKVAYDISGPSMVMWTVDDDIRDGFGRLARAKSIDDAWYEEFDGLLTRAQEMI YKEQNILFPICAENFSTEEWYQIYKDTAQYEEILGVKRTIWTEAEAALATQITKASGDDN TIALIGGSLTVDQLNAMLNTMPMEVTFVDHEDINRYFNDGEKVFKRPTTAIGRDVYSCHP PKIEPIVRGIIESFRKGERDNVAVWLEKVGRPFYVNYMAVRDQNNNYLGTLELVQDMQFA KDHFKRS >gi|292596540|gb|ADCV01000008.1| GENE 201 241715 - 242902 609 395 aa, chain - ## HITS:1 COG:FN0625 KEGG:ns NR:ns ## COG: FN0625 COG1168 # Protein_GI_number: 19703960 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Fusobacterium nucleatum # 1 392 1 388 398 305 36.0 1e-82 MNTAEFTKKYYIDRRGSHSRKWNGQQLKFNRTDLLPLWVADMDFMPPQCIQEAICNYVKA NPLGYTMTNPDYLKAVISWYKRRHRCIIDGSWLTSAPNVITGIMWCIAAFTKTNDAIAVL SPVYGAFDSSTSDAKRQIIAVPMTRNEDNRYAVDYEAFEAAIIKHDVKLFIHCNPHNPVG HVWTAEEMDRLFSICQQHKVLIISDEIHQDLITGLTPFTSALTVSKGAYTDRLIAMSSLS KSFNIASLHHAEVIIPDEELRNHYNAFKALVYHTDSDVLAEAAITAAYTHPEAEAWLTDL LNVVKENYDYMCNKLLANLPELRISPMDGTYLAWIDFSAYLKPEEMHDFFENKCGIAPSF GEWFGGESYATFVRLNLATSLENIKIATDAILQNI >gi|292596540|gb|ADCV01000008.1| GENE 202 243522 - 244874 1814 450 aa, chain + ## HITS:1 COG:TM1640 KEGG:ns NR:ns ## COG: TM1640 COG0493 # Protein_GI_number: 15644388 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Thermotoga maritima # 14 439 27 459 468 343 45.0 3e-94 MSNELKPLHFDADYTMEEALAEAKRCLNCPKPLCRMGCPIENEIPRFIQAIARGNFGEAN DILAERTNLPSICGRVCPRENQCEGNCIMNKAKKPPINIGKLERFAADFESINELRKPKK IKQDLGKVAVVGSGPAGLSVAGDVAKLGYEVTVFEGQSEPGGVLLFGIPEFRLSKAVVRR EIARLEGLGVKFVCNTFIGQDKTLDDLFAEGFDSIFIGTGTHIPQEVRMENDEVHGVFQA MYLLTNVQLVENGELDEAQIPVKKGDRVIIIGGGNVAMDAARTCVRLGCEAVTVAYRRSQ EQMPALLSEYEEARAEGVQFQWFASPVGVEGTDKVEGFKYEVMALNEDGAGIHGTGNFQV MPVDKIIIAAGHKPNARLVGEGNNLKVDEKGYIITSEDPYGMTNRKGVFAGGDVVHKPAT VVLAMREAKKAVDGMVKYMEIKKAQESITQ >gi|292596540|gb|ADCV01000008.1| GENE 203 245344 - 245619 311 91 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1718 NR:ns ## KEGG: Vpar_1718 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 91 1 91 91 176 93.0 3e-43 MNPIVCCQDLQVRQEIHKLGVLILLWRRQLGMTQYQLADKSGLAQSYISDLESGSIDPRW STIYRVVYGLGEMSVQDFLNGPQAIRSLKIH >gi|292596540|gb|ADCV01000008.1| GENE 204 245597 - 246274 767 225 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1717 NR:ns ## KEGG: Vpar_1717 # Name: not_defined # Def: protein of unknown function DUF1121 # Organism: V.parvula # Pathway: not_defined # 1 225 1 225 225 442 100.0 1e-123 MANTETTINAVINPEINETPIDIEKTIKALERNKFVVHYFETGAEAISYLKGRIQNKRVA IGDSHTLLELKVHDVLAQVNDDITDIQRPLPGESFRDTALRTMGRDVFLTSVNALAQTGE MVNIDGTGNRVAASLFGSQEVFFVLGINKITPDLASAIYRARNVAAPLNSKKNKKSSLNP CATLEEKCYDCGSPDRICNALTIYYKKMRNMQTMEVIIINESLGF >gi|292596540|gb|ADCV01000008.1| GENE 205 246207 - 246395 116 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSIGVSLISGFITALIVVSVFAISPPKWVYKEYKLAFCYPYFISIIVACMCKEFNYWYVV RK >gi|292596540|gb|ADCV01000008.1| GENE 206 246665 - 247663 1699 332 aa, chain + ## HITS:1 COG:FN1172 KEGG:ns NR:ns ## COG: FN1172 COG0280 # Protein_GI_number: 19704507 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Fusobacterium nucleatum # 1 331 4 333 337 345 55.0 7e-95 MDLIQKLKDQVKPLGKKIVLPEYKDERVLKATEIILKEGFVTPVLVGSPAEIAEAAKAVG VSIEGAEIIDPANYDRYQEMVDTFVELRAKKGMTPEKADATMKGDCLFFGAMLVRLGAVD GMVAGSACPTANVLRAALQVVGTKPGLKTVSSSMFMFTSKKEYGDDGMLVFSDCGVLPNP TSEQLADIAESTVEKARKVVGMADPRVSMLSFSTKGSASTPEVDKVVEAVNILKERNVDF KFDGELQLDASIVPSVAEKKAPGSNVAGKANILIFPDLQAANIGYKLVQRFSGADALGPL IQGLAKPVHDLSRGCSAQDVVDVAAIAAIESI >gi|292596540|gb|ADCV01000008.1| GENE 207 247927 - 248586 656 219 aa, chain + ## HITS:1 COG:SA0249 KEGG:ns NR:ns ## COG: SA0249 COG2846 # Protein_GI_number: 15925962 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Regulator of cell morphogenesis and NO signaling # Organism: Staphylococcus aureus N315 # 6 216 2 220 224 108 33.0 5e-24 MSFETINKSMTVADAVKVNPELMDVLAKDGIDFCCGGGHPLAEAIAEIGKDVDAYIAMLN DVQVAQKSSRAEVLSYSKDQLIDYIVHTYHREQLNMIDEIDQGLAKLLNVHYDHHGEELT KIYQTFLQLKSALVPHFRHEEHVDFPEFKSGKPIDFDELRAEHEAAGVLLESLSALTNQY TAPADGCATYVYVFKTMKALEEGLHEHIFLENSVLFDMK >gi|292596540|gb|ADCV01000008.1| GENE 208 248863 - 249666 854 267 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1714 NR:ns ## KEGG: Vpar_1714 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 267 1 267 267 507 97.0 1e-142 MISVFDTNPVVFESTDRILTVSYNGVLCKDSNGQVITDIDFDDVNELHLTRYLNSNSNYS IIFRDHNWKNIEGQDLDTDRTDYNTGHNIRETKAIIAAFARHKLTADFPTNLDTLQLPLD YSYMGKREITIKNGVISNGKVDIPINEIRRVVCASNGTISKLLVYKEEKPSSFFKKIFDK CDMKITLNAITLPLLEAIVTRNTGHGIDFSRGNGFDQKDSNYIIIRYLDSGFFLDKDGTA PTEWQKTAADRTAAFDYDVRYKYNRDF >gi|292596540|gb|ADCV01000008.1| GENE 209 249685 - 250227 656 180 aa, chain + ## HITS:1 COG:CAC1549 KEGG:ns NR:ns ## COG: CAC1549 COG0386 # Protein_GI_number: 15894827 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Clostridium acetobutylicum # 1 180 1 181 181 202 58.0 3e-52 MSVYQFSLPTKSGELQSLQTFEGKVLIIVNTASKCGFTHQYEGLEALYKQYKEQGLEIIA VPSNQFGEEEPGSNNEIQSFCKLNYGVTFTVMGKADVRDESALDLFKYMIREQPFQGFPP SDKTEMLTNYLNGIDPNYLRDDEVKWNFTKFVIDRKGNVVGRFEPVVKPMEMEAFIKKLV >gi|292596540|gb|ADCV01000008.1| GENE 210 250411 - 251205 724 264 aa, chain - ## HITS:1 COG:YPO0659 KEGG:ns NR:ns ## COG: YPO0659 COG3384 # Protein_GI_number: 16120984 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 3 251 5 254 260 206 42.0 3e-53 MKRMPTLFVGHGSPMMALEHTETTTTFKNVGQNIINNYGKPKAILAISAHWYADGTYIQS TENPKQIYDMYGFPQELYEVVYPAKGDSNLTKEVQKLLGNFVSINDTWGIDHGMWTVLVH MFPDASIPVVQLSINKHLSPKEAYQLGVKLQSLRDEGYLIMGSGNIVHNLRRIEWDSPSG TSATIEFDQYISKAVLENDINAIVNYTRHPQASYAAPTPDHYLPLIYIMGASESAKPTVF NQTYSLGSLSMTGFIFEDEPQNIF >gi|292596540|gb|ADCV01000008.1| GENE 211 251646 - 252002 519 118 aa, chain + ## HITS:1 COG:CAC2568 KEGG:ns NR:ns ## COG: CAC2568 COG1733 # Protein_GI_number: 15895828 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 9 113 8 112 117 128 53.0 3e-30 MAEQLVNVHDLVGRCPFATSQKLLAGKWSLLIMHELSEGPVRFRELERRLYPITQATLTR ALRQMEDDGLVHREVYGTIPPKVEYSLTEVGAGFKTVLASLENWGNQYIDYMKAAGRM >gi|292596540|gb|ADCV01000008.1| GENE 212 252258 - 252959 641 233 aa, chain + ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 4 202 2 204 237 107 34.0 2e-23 MLHVTFLAHSGFLVEDGKRCYVFDYYKDPNNIVWQLAKRGRELWFFVSHTHGDHFNPSIT EFDGPQTRYICHQDVPLEGKVKKCITMRPGQDAILDDVGIHMYGSTDEGGSFYVKTNTAN IDSDSIFHAGDLNWWHWLGDTPENNADAKRMAWREFKELDGLSVDVAMFPVDNRLEDAME WGSIEFLRRVQVNKAFIPMHLNGPLWTPSVYFKALFGEVPIWEPQKDGDEATF >gi|292596540|gb|ADCV01000008.1| GENE 213 253157 - 254290 1017 377 aa, chain + ## HITS:1 COG:CAC1096 KEGG:ns NR:ns ## COG: CAC1096 COG2733 # Protein_GI_number: 15894381 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 6 366 43 406 425 73 18.0 6e-13 MHISGAAMIGGLADWYAVTALFTKPLGIPFKTAILPRSKERLIQIGRTMLSEELLRVPQM YYAIKKERVMVRIVEYGMSDVGQVQIRNLLYGVGNQVLSHMDIEPMRQEINKAIYKGVTN WKATPLVILFGRCMLERHTASVFWLYFNRTCQRVIASNQVYPYLYRVMLDIMKTYTKDSF FRELAIAFGGDGLSPERLVETVQKKAVQFLKENESIDSALGRYVWGQAIRFFNNLETNTE WQAFIEEHKNQWIRMVLEEWEGKLIDGDTLDWKRLMDIVMERFNVLGTEILLNPDKQAPF ERFFLLRSIPWLQKLNPLIDSVVGQELSRYSPDEITQIVRGKMYYDLQMVRINGSLIGAV LGGILYGLTIIVEGVLK >gi|292596540|gb|ADCV01000008.1| GENE 214 254287 - 255600 1333 437 aa, chain + ## HITS:1 COG:CAC1096 KEGG:ns NR:ns ## COG: CAC1096 COG2733 # Protein_GI_number: 15894381 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 8 431 1 416 425 135 25.0 1e-31 MISYLKSLTLKQRANRILGLTAVLYCFAFVGQFFFGYESWYQPLYWAVQSALIGSVADWF AVTALFRKPLGFPYHTALIPRNKDRLINGVIKLVETKMLTKERCKVLLKNVQFVPLFEKF LLSPEGQRAARLVIHQGLHLLWKSQTNEEWAQWGAKRIRGLLQQHSLVPVLKHVLLDLCE HNRYESMVVQVLNVIQERINHPAMVTWLTAVVAEEAHKKKRKGFWSDFLISMSEATDVVN YQEMAEAIVQEAYAMLESWKRPNSPERTAWLRQWVEPIRNIEENHEVCDALDEAWERWIR EQDWESVIENHLCPYIEELLLVGDENGETPAQVLVNIALELWNVYGQSDDLRNRIEKTLH DIGDYVLEQGYDLIETIIRQVLGGLSTDKFIYFIESKVEDDLSWIRINGAVVGAVAGLLV WTFLEYVYMPFWQQFVG >gi|292596540|gb|ADCV01000008.1| GENE 215 255769 - 257184 1395 471 aa, chain - ## HITS:1 COG:FN0586 KEGG:ns NR:ns ## COG: FN0586 COG0642 # Protein_GI_number: 19703921 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Fusobacterium nucleatum # 24 465 9 444 445 225 30.0 2e-58 MSSKQKTNDPHRDLDTMSGAATDLFNRLPLTFKIMSWYTIFLLIILMVASAWIYAYTHES DNKEVRERLQQQAMIMATDIRKFKPYQDNTFFFVSTQDGYIIKGALPDGFPNQTILSLGQ VGEIAAGDDTFYYYDTPVNEPNYRGILRAVTKVKTASKKTENLLYSLLLGNIIFLLISSL GGYLFIKKGLKPVRTLTKTAKVIGKNNDLSRRIDIPARTARDEIYELTTTFNRMISGLED SSNRERQFSSDVSHELRTPIAVIKAESEFALKYGRTEADLREGLTHILEQAKFMTNLVSQ LLDVARLENAQGLSFAPVNVSLILSNMVHDYTRLCTENTDKQITITSHIEPNLHMNAHEV SLRRAITNLVDNAIKFTNSTIDISAKLVGRDLVITVTDNGIGIEPEALDHIWDRMYQTEQ SRNKKSNHGIGLGLYFVNKVINLHHGTVTATSEPQVKTTFTVRLPYNTTEE >gi|292596540|gb|ADCV01000008.1| GENE 216 257162 - 257836 938 224 aa, chain - ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 1 223 1 223 224 210 48.0 2e-54 MKILLVEDEEMLNGITAKYLRAENMTVDTCFNGQQAIDYVNTSSYDVIVMDIMMPILDGI SALAQMRNDGNTTPVLLLTAKDSLQDKVTGLNTGADDYLVKPFDLEELTARIYALARRNA RHAQNDIHVGPLTINVPQRTVKRDGETITLTAKEFDLLFYLASNENIVLSRQQILDHVWE YDYESYSNLIDVYIKDLRKKIDTDENVKLIQTVRGVGYVLKTEN >gi|292596540|gb|ADCV01000008.1| GENE 217 258721 - 260439 2419 572 aa, chain + ## HITS:1 COG:aq_594 KEGG:ns NR:ns ## COG: aq_594 COG1053 # Protein_GI_number: 15606038 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Aquifex aeolicus # 1 572 3 571 571 579 50.0 1e-165 MEQFDVLVVGSGGAGMRAALEVGRRKGLKVALITKIFPTRSATAMAQGGVNACLNNVAAE DTVETHTFDTVKGSDYLGDQDAIEFFCSRCPEGVLEMDHMGAPFSRTEENKIAQRNFGGQ SYPRTCYSADKTGHVILHTTYEQCLKEGVHFLQEWYLLDLVKDANGHVGGAVVWNMKEGK VEQIKAKAIILSTGGAGRIFWTRTTNPFLSTGDGMAAAFRAGNGLKDMEMIQFHPTGLGR TGILMSEAVRGEGGYLLNSEGERFMKKYAPNKMELASRDVVAKAIEDEIAAGRGFGSGLN AYVVADLRHLGPEVIIEKLHGIRDLAMTFEHCDPLTQPVPIRPTCHYTMGGIDVVDYKTC ACELPGLFASGEASCISIHGANRLGGNSLADGVVFGKVSGAGAADYAETHEQPNVDAELA AAAKAWEAKFTEVTTREGGRPVVEIRDALADAMWNKVGIFRNEEGITEALKEIEQLIEDY KTCYVGDPERTYNMAFVNYCEIGSMLTVAKAIAMGALHRRESRGAHIREDHPKRNDERYL KHSLIKLGADGQYELTERDVVFTKYEPQERKY >gi|292596540|gb|ADCV01000008.1| GENE 218 260441 - 261403 1118 320 aa, chain + ## HITS:1 COG:Cj0438 KEGG:ns NR:ns ## COG: Cj0438 COG0479 # Protein_GI_number: 15791805 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Campylobacter jejuni # 8 319 5 318 321 255 40.0 9e-68 MRQITYHIHRYQQGRAFVQTFKFDYEPDRTILWGLQKIKDTQDPTLTFLAACRSAVCGAC SIRVNGEAMLGCESKIDELTERYGTDELTIAPIGNFRVIRDLVVDWESKVDRLKTVAPWI FLKAEFNEGDKIVRQTPADFKKFVAGTECILCGCCASECNKLTAREDDFLEPYVFTKANR FVLDSRDDAPMAHIQPAFDNGLWKCVHCMNCISRCPKHLKPAQDISNLRKEATKAGLTNS KGVRHAVAFKEDLYKTGRLKEVSMSLKSDGVVDSAKQAFYALRLWKHSKINPFELVVPQK PVNGIDGVRRLMKAAEEVSK >gi|292596540|gb|ADCV01000008.1| GENE 219 261403 - 262278 1079 291 aa, chain + ## HITS:1 COG:Cj0439 KEGG:ns NR:ns ## COG: Cj0439 COG2048 # Protein_GI_number: 15791806 # Func_class: C Energy production and conversion # Function: Heterodisulfide reductase, subunit B # Organism: Campylobacter jejuni # 2 275 4 274 285 281 51.0 2e-75 MKYAFFPGCVLESAAKEDYLATVAVAKKLGIELEELDGWTCCGASHVQDIAPEVTLATNA RNIALAEEKGLNLLTVCNTCTLMLREAKNELDANEKEKNEVNKKLAQIGKQYRGTTDITH FLWVLIRDYGLDKLKAKVVKPLTGLRVAEYYGCHILRPQTELGFEDYQMPTSLADLISAI GATPIDFSRKLDCCGFHAVYPAHDSVMQMTGSINKDAATEGADCVVTPCPLCQMQLDMFQ KEAKEVVGGGKDMPILHMSQLVGLALGISPAEMGMPKRHLTDTAAVTKFVG >gi|292596540|gb|ADCV01000008.1| GENE 220 262701 - 263486 226 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148826972|ref|YP_001291725.1| 30S ribosomal protein S15 [Haemophilus influenzae PittGG] # 13 259 1 240 241 91 26 4e-17 MISIIECIYGGKIMNDMLLEYIDRMIDQETEHRVFSVDFNNKQYFVKQDISNHRSSWIKP APRASFDYEFYKISFVNTQLPVAPVIAGFREHYFVTEACGKTLTYYSQLPAQHPEDDSLQ DMLSHIFYMFGKTLGQLHDYGLSHGRPAMRDITYEPELDKITLLDWENSRRWPELTPQGW DLLVFVHSFLREDNLSISYLYAMMNGYSSACTARETVLHIKEILRKHEYLFKFCRMLNPL HFVDTEAAVKAYDFMLALKTE >gi|292596540|gb|ADCV01000008.1| GENE 221 263712 - 263918 382 68 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1701 NR:ns ## KEGG: Vpar_1701 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 68 1 68 68 117 98.0 1e-25 MANIKRTKLVLRFNIGTEDAPKYKDVTYTRVAEEASDDNVKTVGNALAALYDHSLSDVVR VNEVSLGH >gi|292596540|gb|ADCV01000008.1| GENE 222 264140 - 264361 411 73 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1700 NR:ns ## KEGG: Vpar_1700 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 73 1 73 73 92 100.0 4e-18 MAEKRVVYLTFSTVGGKSTSVTISAPRAGITLQDAKTAANALVANKVILGAGDAELAAFT TAREVKTQTTELQ >gi|292596540|gb|ADCV01000008.1| GENE 223 264675 - 265286 801 203 aa, chain + ## HITS:1 COG:XF1079 KEGG:ns NR:ns ## COG: XF1079 COG0811 # Protein_GI_number: 15837681 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Xylella fastidiosa 9a5c # 6 198 3 198 220 76 30.0 3e-14 MKEAWELFLHGGFVMWPLLVALIITVAIAIERIAYYRQLKREMFALNDALEESEINWQSL LISLESKYTANISYNLPRVLGQCQDRNVLQSKMEDMVAHVYTHASRGLDWLSTIVTIAPL LGLLGTVTGMIGAFQVFGADGAVPTAITGGVGEALVATASGLCVAIVALCFHAGFTHHVR MTISRLEDSFSRVLDSYDRGHAA >gi|292596540|gb|ADCV01000008.1| GENE 224 265325 - 265687 421 120 aa, chain + ## HITS:1 COG:slr0678 KEGG:ns NR:ns ## COG: slr0678 COG0848 # Protein_GI_number: 16329551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Synechocystis # 2 118 41 157 269 72 28.0 2e-13 MIIPMIDIIFFLLVFFMISTIYTIPQQSLSIMLPKTKTQQSAELRPVLIDFEKSGQLMID DGYVTKEQLISSVKAKIGENKNQNFLIRADKDLSYGKVVELMDEMKLAGAASISIATVNK >gi|292596540|gb|ADCV01000008.1| GENE 225 265696 - 266499 944 267 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1697 NR:ns ## KEGG: Vpar_1697 # Name: not_defined # Def: TonB family protein # Organism: V.parvula # Pathway: not_defined # 1 267 1 267 267 384 91.0 1e-105 MAKKYVDVWKYPHMTYKKAFVIATVISIITVGVAFVSFSDYIESQMTGSLQINFLTEQEA EKQVEEIKEQIKEEKAHEIQHSKELENNNVQLDNGGAGHGGQNGNSAVPTKSDVSPSSQQ ASAGEIGTVKQSSVGSNTGSGLVGAEGSGIGYASTGSGEGLSDREGTGGTEVDVGGGGTF SYDGYWSNLQSAINSNYPTDAYTMGIQGDVTLRIYFAPGGSVASVEVLNSDDPMLSEHAR EYAYSVGGAENSTGTQQYADITIHYNL >gi|292596540|gb|ADCV01000008.1| GENE 226 266666 - 268729 1732 687 aa, chain + ## HITS:1 COG:PA1922 KEGG:ns NR:ns ## COG: PA1922 COG4771 # Protein_GI_number: 15597118 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Pseudomonas aeruginosa # 49 683 36 649 653 172 24.0 3e-42 MKKSWAALLCVVYLTSAAGVVGAENNSSTSVVSMNESQNNASDEQSRRMKDITVTATRTE ALVRDVPIATTIISQEEIKDRQYRNLEQALQSVPGVAFSTDAHGGQNITMRGAESRHTLI LIDGRRVTGELTKTRANAMGWLRQGMDNVERIEITRGPSSALYGSEANGGVINIITKQSR KPSVEVNTEISRRDASSATGYNFNVLARSGQQGKWNGSIGAGIRRNIAGNNDSGSDNNYH GDRIPLHFDVSYQAGKRDKFSFFIDRETEDLDMNTKKGSALTQSVDKNTTTTSTGLRWNG RRGRSSLMVQSYYNHYKDTYDQYKRTGGIKKLSIWDEYYNKEWITDAQVNTAIDKKNLLT YGVQFRRQEAISTRINNGSIAWSRTREGITDTAGKATINYGSYFVQHQWKPSRKWVIIPA VRYDTSNAFDSHWSPKIGVTYKANDSLRFKMNYGAGYSTPGMTEMYHHWLMASNVPRGRL GAFDIYLQGNPNLKPESSYNFDFSVEKDWKRTNVKASYFHNVIKNYIESGANRIDMANRR IYVSYSNLPRAVLQGVELSVNHRLNNKWDVFGNYTYLDAKNDVTHDRLLNRGRHVFSGGV NYHQGRWTGAFWGNYYINYLDGIDAIVVNPRLSIPKKKNIQTWNVMVTRQLNDNASMYVG VENIFGEKQDLRDIHGATYRMGLNLRM >gi|292596540|gb|ADCV01000008.1| GENE 227 268886 - 269836 534 316 aa, chain + ## HITS:1 COG:BH3290 KEGG:ns NR:ns ## COG: BH3290 COG0614 # Protein_GI_number: 15615852 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Bacillus halodurans # 31 304 40 305 319 92 25.0 9e-19 MGIVAVVGAFTTGISFEGKREVFSEAGAIQIEDDTKQIVSLPNIASRVVSISSADSELLI TLGVSPVGVVNSRELPTEVQAKIAQYPNMNSAVSPSIERIIMSDPNLVIGIAMPFQTALR KAFNANHIPSFYHLSSNYDDIMDHIRHVGTMTGHDREAAALVQKYNDILTEIIQRHKDES APRVLIVFGTPTSYQLASSKTYVGDILQRLGAKNVADVYLPQDVSENALDGYIPLNLETM AVLDCDKVILINHGSSGEKDIAAFKKAFKTPAWQNVPAVANGNIEVLPGPLFASVPTARM DQVLLYAEKVLYGQSH >gi|292596540|gb|ADCV01000008.1| GENE 228 269820 - 270821 1148 333 aa, chain + ## HITS:1 COG:BH3291 KEGG:ns NR:ns ## COG: BH3291 COG0609 # Protein_GI_number: 15615853 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Bacillus halodurans # 15 331 13 329 332 261 47.0 2e-69 MDNLINVQELRGLRVFVAALILLIAGVLLSMKLGAVPLTWGELYQIITGGDTSKIGQIIM TIRLPRVVVGFLAGMNLALAGVILQGILRNPLADPGIIGITSGGALAAMIIMILMPTYVM LVPIGAFVGALVASFLVYGISWQGGLNPLRLILAGVAVAAFFGGFNTILSVFYPDRVQGT VSWMAGGFVGRSWDDVMMIWPYTAIGIIGSMISIRWLTLLSLGDDTARTLGVHVERCRLS LLVLASLLAASAVSVSGMLGFVGLIVPHVARLIVGVDYRYLIPTSMVFGGILIVYADTLA RMMIAPGEIPVGVLMSFLGAPFFLYLLKGVGRR >gi|292596540|gb|ADCV01000008.1| GENE 229 270818 - 271606 216 262 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 224 1 223 245 87 29 5e-16 MSVLTVDNITVGYGKRLILENQSIVFDKPEIISIIGPNGSGKSTFLKALARLIKIKQGTI SLDGKSLHSWNTKELARHIALLPQITTAPEGMLVEQLVRSGRNPYVSIFKELSDADLAAV EKAMKCTDVWKYRYRQIGELSGGERQRVWLSLSLAQEPNILLLDEPTTYLDSRHQIELME LVKRTQRERNIMVVMVLHDLNLALRYSDRIIAIKEGAIVGDGTPHMMMTPENLAEWFGIK ADILQSPRSEETCPICVPYGLA >gi|292596540|gb|ADCV01000008.1| GENE 230 271852 - 272445 346 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175107|ref|YP_001408238.1| ribosomal protein L22 [Campylobacter curvus 525.92] # 1 197 3 198 199 137 34 4e-31 KIVEYIISFMETYGYTAMFIAMVLENANVPIPSEIVLGFAGYLIAQGIFDMHTTMVVGIL AGIVGSIVSYWMGEHGGRPLLLKYGKYIFFNEHKFELAEKMFNKYGGVAVFFGRLLPGVR TFISFPAGMARYPMWHFIIWTVLGTIPWTILLVYLGKVLGENWQDLIEYNHEFLIVMIVV FVIIAVVLGFRYYRNRR >gi|292596540|gb|ADCV01000008.1| GENE 231 272456 - 274087 1422 543 aa, chain + ## HITS:1 COG:STM2301 KEGG:ns NR:ns ## COG: STM2301 COG1807 # Protein_GI_number: 16765628 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Salmonella typhimurium LT2 # 16 335 17 337 548 107 24.0 4e-23 MKLSRLTPVVFIVWLVFYMFGNNMLPVTDPVESNYALTAKEMVLSGDWLSPQIYGTYWYD KPIMIYWLIALGFKIFGIADWVVRLPSAIFGALSVATMYQSTRTMSGKWALGLIGASVLG TSLMFWTVAHGVITDMVLLYTTLMVMIYSYKGLVEQKPYAMIVAYVFAALGVLTKGPVAI VLPGMILLVFAGINRSWSMVKAIFDWRGILAFCVVCLPWYVYMYSVHGQDFINGFLGLHN VTRATQSEHPEDNVWWYYLAIFLGASMPWTGAVIYGIIDGFKQRHTGFIYNMTWGVGIVL FYTLMATKYPLYTFVSLVPFSAIGALGVMKLIRKGKSRALKWIIMGPTLLLWIAYVAGSF FAPWGFYFLLYVVVATAALLMLYAWYTRRGYRLVTIIVLGTMVISSVVVMEGLEPFVKQR SNIDVVPVVDSYEGDVYYYNGYSTAVVYYTGHKVIKINGDESRWDDRDKLKKRSAEWQKK YLMEQVSEEEFNKTIESGKPLMLIVPKGEIKHFRQSSIYPYVSESSEAGTSEVYVLNKKT LFK >gi|292596540|gb|ADCV01000008.1| GENE 232 274526 - 275479 1002 317 aa, chain + ## HITS:1 COG:SA0167 KEGG:ns NR:ns ## COG: SA0167 COG0715 # Protein_GI_number: 15925877 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Staphylococcus aureus N315 # 30 315 29 316 323 191 35.0 2e-48 MKKFWYLFIAIVLLIVSGLAYGYHEHSKPKTAQELKTVRVAYLPITHALPVFAMKELETA DGPVHVELVKYGSWPELMDALNTGKVDAAAVLVELGVKAREQGIDVRAAALGHTEGNIIV VNNDINSVQDLKGKSFAIPHKQSTQKILVDLMLERAGLSEKDVQIVEMSPPEMPSALSVG QIAGYSVAEPFGSLAIEMGAGKVFEDPDHLWHDNICCALVFNGQFVDEHHDLAKAFTKAY LDAGTYLDEHPEAQKEIALKYMKFKDPVIERSLQVIGFGDLALTEDRYKALVHHMTHVDL IKKVPSYSEFVDTSLLP >gi|292596540|gb|ADCV01000008.1| GENE 233 275490 - 276242 738 250 aa, chain + ## HITS:1 COG:SA0168 KEGG:ns NR:ns ## COG: SA0168 COG0600 # Protein_GI_number: 15925878 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Staphylococcus aureus N315 # 11 247 16 252 253 165 45.0 9e-41 MKKYTYVPGAFIAVWLIWELVVRIGGFNEALLPTPYKVLLGFGELIGDGVLFKDIADSLV RFFIGYIISVVAGVFLGLILGWYKGIWNYINPIVQVIRPISPVAWLPFIVLFFGIGQAPA IVIIFIAAFFPVLLSTVSAIQNIDPVYIKVARNFGIKQPELLFKIVLPAVFPGIASGLHI ALGTAWIFLVTGEMVGSQTGLGFLIIDMRNNLRNDLLMVAILTIGFVGLLLDWGVSLIEK WIYRRWGIEK >gi|292596540|gb|ADCV01000008.1| GENE 234 276254 - 277027 855 257 aa, chain + ## HITS:1 COG:MJ0412 KEGG:ns NR:ns ## COG: MJ0412 COG1116 # Protein_GI_number: 15668588 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Methanococcus jannaschii # 4 242 17 255 267 238 51.0 7e-63 MGYISVRNAHKEFMKDGESLTILENINLDIERGEFICLLGPSGSGKSTLLNAMAGFELVT SGSVIIDGAEVKAPQLRYVTVFQNYGLLPWRTVESNIELGLESKNVPKEERPAIIDKYVK MVGLDHARNRYPAELSGGMQQRVSIARALAVDPDIIFMDEPLGALDALTRINLQDEISRI CREEGKTVVFVTHDIEEAVVLADRVVVLAANPGRVQTIIPVNLIDRTDRTSASFVNIRNH IFEQFQLAKEDKIEFYI >gi|292596540|gb|ADCV01000008.1| GENE 235 277294 - 278091 567 265 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1687 NR:ns ## KEGG: Vpar_1687 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 260 1 260 265 511 94.0 1e-143 MSLFAPEEEKTLSFDEYIASFDTNQIAKVQQFVDWLGQYRGELVHNPWGEVNTDLEIVRP GYDAAQVRRNNLMAYLLPRLGRSKIFVVAEAVGYQGGRFSGIAITCERMLLDKHKTIRAH QITPVTLQRTSSPMSPMLKRTQQEQGFNEPTDTVVWSAIIEQGIDPYDALLWNIFPFHPH KADEPLTNRTPTESEQQLGWEYTKRLLALHTELGGPKPLVLAVGQKSADTMGRFGLSAIG LRHPANGGANLYREGFAKAIGQSIW >gi|292596540|gb|ADCV01000008.1| GENE 236 278357 - 278428 85 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTTYESEAFIKTDRTILHCVLD >gi|292596540|gb|ADCV01000008.1| GENE 237 278636 - 280804 2700 722 aa, chain + ## HITS:1 COG:CAC1683 KEGG:ns NR:ns ## COG: CAC1683 COG0595 # Protein_GI_number: 15894960 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Clostridium acetobutylicum # 173 722 5 555 555 603 51.0 1e-172 MLNKLMNKILGGTVNTTDNQVTAQVKAEPTVAKNATLTAVAEGEQKQTRRRTNTRRPAGE GRTRQQTAGEGEGSTRQRRSTNTRTSANGGRTNTTRRTNTRRNAEQGEGQERKTRQTRAP RGENTRNTRTNNGRNGQNGQNRNNNRPNNRSTGWNNQEEQVELVGRTPNGANKGKFQIIP LGGLGEIGKNMTIFQYEDEIIVLDSGLAFPSEDMLGVDIVIPDMSYIIENKDRVKAVVIT HGHEDHIGSLAYLMKEISCPVYATNLVCGLIEGKFKEHKVSPKCLRTIAAGDEVQIGQVT VGFIQTNHSIPDSCAVYFNTPIGTVLHTGDFKIDQTPVDGRLMDMHKFAELGNKGVLALL SDSTNVEKPGTTGSESSVGPAIKQAVGEAKGRVVLATFASNVSRIQQAIDAAVMFNRKVV VMGRSMVNVTEIAQERGYLNIPPNTIIDVDVMHNYTDDQIMILTTGSQGEPMAGLSRMAT SNHRTVELAPNDTVIISATPIPGNEGAVGRTIDNLLRLGCNVVYGKDRGIHVSGHASQEE LKTMLNLVRPEYFIPVHGEYRMLRRHGELGVAMGVDPKKVLIGDNGQIFEFDKDGGRKGG RVQAGAIFVDGLGVGDVGNIVIRDRQQLAQEGMVIVVMAMDKASGTIVAGPDLVSRGFVY VRDAEELMLTAERRVEQVLEDCEMQRIKDWTTIKQNVRDALGKFFYDKTRRRPMILPIIQ DV >gi|292596540|gb|ADCV01000008.1| GENE 238 281220 - 281957 876 245 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1684 NR:ns ## KEGG: Vpar_1684 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 16 243 89 317 318 103 29.0 7e-21 MAMATILAYSLPSIFLGEAFRANWSFGKLIVIPAIALTLTSLIGILISAGLTSFDLSQIS RMIDVDLKNAIIESVKQQSMTQEQMDAYINRLDFAFQQVKRMLLAYWFAANAIVIYILAK LVSYIGRRTNSVMRTLPTMDTWRMPLWGAGVLAVGIILAYAGPYLGYTESILADVGLNLA LFGAMICGLNGITCLLSIMKSYNLAGIFKFAIIAFLYVMSPLALVIYGVFDMFLDMRARF EKRSS >gi|292596540|gb|ADCV01000008.1| GENE 239 281974 - 283995 657 673 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|194246575|ref|YP_002004214.1| 50S ribosomal protein L9 [Candidatus Phytoplasma mali] # 38 657 67 674 837 257 29 4e-86 MKSFQRRWKGLEITIVAVLVLLLLLLAYLNWAIAILALIIVVAAYLVNYNTLHNRRRLAR EQFSAMMKNVTQASNFALQNLPMGIVLVNKQGTLVWNNSVFADWVKVDWNKLQKMSALLP GFRIDKIWGKSGYMTEKYENRYFQIIYKFIDPRDTRSDIDSEDELAEHAVMALYFKDITD LEKARIKAEEGQPVWGMIQIDNLEELTKGLSDREYTSIWTDINNIIMDEIDRYEGFIRNF QDDMYTFAISRGALHEMEEDGFKVLERIRKVPSPRQVPATISIGISENVGSVKDVSGRAR AALDIALGRGGDQVCIMDGESTRFFGGNTAGVEKNTRVRARVVSQAIHELMIDSDKILIM GHQREDYDALGGIIGVAAIARALGKDVRIALSKETSAIDKMVNVLNKSEFWKENIITAEA ARVWVDANTLTVVCDTHRQEMVAAQEALEISERRIVIDHHRRAADFVENPLLTYLEPTAS STSELVTELVQYAGVPVKLSKAEATGIYAGIVLDTKNFVQQTGARTFEAAAFLRRAGADI DRVKQLFIETFDSIQLRAKMVFEASRTEGIAISVAPEGLKDMMALAAQSADMLISNEDIE AAFVLYSLNDGGIGVSARSKGKVNVQVVMEALGGGGHRTVAGAQLQGMTIEEAKQAILEH ALEALHSAEQEEE >gi|292596540|gb|ADCV01000008.1| GENE 240 283998 - 284444 721 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371820|ref|ZP_03855303.1| LSU ribosomal protein L9P [Veillonella parvula DSM 2008] # 1 148 1 148 148 282 100 1e-74 MKVVLLEDVKKVGKKGEIVEVSDAYGRNVLIKKGLGLEGTATNVNNAKQKQESIAHNKAV ANDEAKILAAQLTKVEVTVKVRMGEEGRVFGSVTAKDISDAAKAQYKVDIDKKKIEIKEP LKTLGVHDVLVRVHPEITSTIKVNVVAE >gi|292596540|gb|ADCV01000008.1| GENE 241 284514 - 285872 2034 452 aa, chain + ## HITS:1 COG:BH4029 KEGG:ns NR:ns ## COG: BH4029 COG0305 # Protein_GI_number: 15616591 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Bacillus halodurans # 4 450 8 452 454 404 49.0 1e-112 MDVRIPPHNLDAEKAVLGALLTNGSNMGAVVDTVTSILKSEDFYRDAHRIIYDAILEIVH ANKTADFITVGEELDRRKRLDAVGGLAYITSLANESVSYNVEEHAKIISEKAQLRRLIDA GNKIVGMTYAGEDEPTAILNKAEQMVLDVSGQTQSESSFAAIGEVVLSNLDKLNALQQHD GAITGVPTGFKDVDHIFNGLQKSDLILVAARPAMGKTAFTLNIAQNVTMLYDKTVAFFSL EMGKEQLVGRILSSVAGVSSEKLRRANMDPADWEKVIAAADRMSKSKLFIDDTPGLTVQD MRSKLRRLKVEHGLDLVIVDYIQLMQGRNAGKGSENRQQEVSEISRNLKLIAREFNVPVI ALSQLSRSVESRPDKRPVLSDLRESGSLEQDADIVIFLYRDKYYDENSEKGDNAEVLIRK HRNGSIGTVELQFVGELTQFRDVEFRDLGPEQ >gi|292596540|gb|ADCV01000008.1| GENE 242 286126 - 287409 786 427 aa, chain + ## HITS:1 COG:SA1196 KEGG:ns NR:ns ## COG: SA1196 COG0389 # Protein_GI_number: 15926944 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Staphylococcus aureus N315 # 7 424 9 418 420 237 34.0 4e-62 MGSADTDRLYMCIDLKCFYASVECADLGLDPFMTPLVVADGSRGKGAITLAISPALKKLG VKNRSRLFQIPPYIEYLTVKPHMKRYMQVSAEIYGTLLKYVAPEDVHVYSIDEYFIDITP YLPLYKKTPRQLAQMLLDAVLVATKIYATVGIGTNLFLAKIALDILAKHASDFIGYLDES LFKETIWYHQPLTDIWQIGKGIANRLHKYGAYDLHGITMIPETKLYKEFGINAELIIDHA WGREPCTIADIHAYRPIKHSISHSQILLRNYTYEEAYVPMREMVESLVLELLQIKGVTNH IHVHIGYADEMMRSTGGSKKLKQYTDSLQVLTAAVIKLYEQHCRKNELIRRIGISFEDLV NRSAIPQEVDLFSTLTTNEEEKERQVQEAMLSIKKQFGKNSILRASSLQEEGTMRFRNTL VGGHNGE >gi|292596540|gb|ADCV01000008.1| GENE 243 287466 - 287792 290 108 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1678 NR:ns ## KEGG: Vpar_1678 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 108 1 108 108 197 95.0 1e-49 MKHRMSRLQRAKQFMPFAALRGFEALLAAVAKPKENRAELSEDQIDELNTVLQSVRCGEW VRIVYYNKRKYTELIGAVDMISEQLQILSVQGTVIPFRYIKELNLYDI >gi|292596540|gb|ADCV01000008.1| GENE 244 287966 - 289498 1252 510 aa, chain + ## HITS:1 COG:FN2009_2 KEGG:ns NR:ns ## COG: FN2009_2 COG1732 # Protein_GI_number: 19705305 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Fusobacterium nucleatum # 240 510 34 304 307 348 59.0 1e-95 MHDVISLLINRYDFFLQLLWEHIEISVLASVIATIIGGLLGVFIYEYKRLAAPVMVVVNF LYTIPSISMLGLLLYVSGVGNTTAIIALVIYALLPMVRNTFTGLNQIDQAMCEAGIALGL TRIQRLWNIEIPLAMPTIMAGIRTMLVMTIALTGIASFIGAGGLGVAIYRGITTNQSALT IAGSLLIALLAITVDALFSLGERVTRISPHMKRYTIIFVSIMTLIAMGIGGWAMYCRHVK TDVIHIATKPMTEQLILGNVLKELIEKKTDLTVEVTEGVGGGTSNIQPAMLSGQFDIYPE YTGTAWSAVLKRTDAYDESLFNELSQAYKEKYNFEWVGMYGFNNTYGIGVRNEIAQTYGV KTYSDLARIAPSLTLGGEYDFFGREDGYAGLQRVYGMSFKATKDMDIGLKYTAISRGEVD AMPIFTTDGQLSIAPITVLQDDKHLYPSYMAGNVVRSEVLIAHPELRPVLESLNHTITDQ EMAKMNYAVETEHQLPADVAHKFLVERNLI >gi|292596540|gb|ADCV01000008.1| GENE 245 289754 - 291883 2861 709 aa, chain + ## HITS:1 COG:slr0798 KEGG:ns NR:ns ## COG: slr0798 COG2217 # Protein_GI_number: 16331908 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Synechocystis # 10 708 17 721 721 503 42.0 1e-142 MEETLLLKDLNCPNCAAKIEDRIRKMDVVETANFTLATHQLKLTGSWEDREALKRDIQDI CDAIEEGVTVADYERKSKATMDDHGHDHDHGSDAVTIAVIVAGLLFMLYEVLSSFVPSIS LPESIETPIYYIAYILLAFPVLRIAGRNILKGQVFDENFLMSIATLGAIAIDALPEAVGV ILFYRIGEFFEEKATDRSRTEIMNAVDMRPQEVRVVDTDCGGEIVVMAPEKVEVGWTIEV RPGDLIPLDGTVLEGETRVNTAPVTGEPVPVRAVPGTQLMSGCINESGRITMRVDKVLEE SMVTKILDAVENAASSKPKIDRFITRFARVYTPIVVAFALAVAIIPSLITGEWHKWIYTA LTFLVISCPCALVLSVPLAFFSGIGNASKHGILLKGGRVIEALANVKAVALDKTGTITSG EFKVHSVETVGSHVSSSQLLSMAAAIEAVSTHPIATSIVSEAKDQGLTVEPSDFVQELAG EGMVGMADGQQVLIGNRRLMERYNVQGYPTEAAEYGTEVLVAEGNTYLGRIIIADEARPD SAEAIANLNGQDIKTVMLTGDAEASANYIAKETGVSAVRAQLLPQDKLSVVQDIRSEYGP TMFVGDGINDAPVLAGADVGGAMGSGADAAIEAADVVFMRPSLTAIAHILDLSKATLRVA WQNVVFAIAVKILIMALGLMGYASMWWAVFGDTGVSILCILNSIRILRR >gi|292596540|gb|ADCV01000008.1| GENE 246 292120 - 292209 88 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSINNAQLYMLKASQNILLSNLPKNLAST >gi|292596540|gb|ADCV01000008.1| GENE 247 292329 - 293282 770 317 aa, chain + ## HITS:1 COG:lin1052 KEGG:ns NR:ns ## COG: lin1052 COG0598 # Protein_GI_number: 16800121 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Listeria innocua # 18 317 16 314 314 249 41.0 4e-66 MITVYKHIEEELVSDCTVSDATKGSWVNLVNPDPDELSLINILTEIPTDVLKTALDMEER SHVELEDNYIFVVINIPAIRGNDMYDTVPLGIFLTPDFFITVCLEESEVLYPFISNQLST FYTYKKTRFLFQILYRTATLFLRYLQQINRRTDDIEVQLRHTTKNKDFFQLLELQKSMTY FTSALRTNGTVMERLLRLRGHSTYRHLLKMYEEDEDLLEDVIIENKQAIEMVEMYSNILM NMMNAFTSIISNNLNMVMKMLAALTITLAVPTIIFSLWGTNVALPFQDDPNGFYEVVGIS VVCSIIAIIGMWKKDLF >gi|292596540|gb|ADCV01000008.1| GENE 248 293322 - 293423 73 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLNTNEKAGCKSAFLLAYVLYYCLFTYYVVAYY >gi|292596540|gb|ADCV01000008.1| GENE 249 293644 - 294870 1573 408 aa, chain + ## HITS:1 COG:ECs4005 KEGG:ns NR:ns ## COG: ECs4005 COG0477 # Protein_GI_number: 15833259 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 405 15 433 444 92 22.0 1e-18 MNRLSFSRTQILILLSVWLTFLLSFVMRLSWASVMPILNEALHFTAKMGAQHISAFYFGY ALTVLPGGILADKIGYRRTILFSLIGMAAVTALMSTITDYNMAWGLRFLLGVMSGPVQAS CLSAIGDHFGPNQRGAAVGIFMSCTSFGITTVNLYAPYVATHYGWQTAFLATAILPLVVL VLCYFTVRKPSAEVLAQREAEASEAAAKLGVGQTSLVENLKHIVSNRNIRCLAIAGFFAT GTTWGVTQWANLYMVKQLGVTAIYAGQVMSVFGTAALIAKPTIGILSDILPIKKNHLAAL VMFLFAPALILFASTANPNMLFVTGPILGIGAFMHSALTNALVVQSAAPHLRGTTAGFVN LFNQIGALLAPLLLGNVLVMTGSYQMSLMSIAIAPIIGACALFFIRLK >gi|292596540|gb|ADCV01000008.1| GENE 250 295024 - 295572 631 182 aa, chain + ## HITS:1 COG:CAC3448 KEGG:ns NR:ns ## COG: CAC3448 COG2755 # Protein_GI_number: 15896689 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Clostridium acetobutylicum # 1 171 1 178 190 62 27.0 6e-10 MEIICFGDSITRGYDVPYGRGWVEICDASIEGVNFTNYGEDGCSVQGMIYNIENWAVTAV SDPTRHIFLMCGTNDILQGRDSTYVYKTLVKAIELASTKGTVIIGLETQIDSDMDGLDLV VREVNEQLKAYAEAHNIKVIDFYTTLFEADQIGQIVFAGEVHPNERGYRLMAYKALEVFT RL >gi|292596540|gb|ADCV01000008.1| GENE 251 295735 - 296727 1459 330 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1672 NR:ns ## KEGG: Vpar_1672 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 330 1 330 330 492 100.0 1e-137 MNKKHLATAFAVFAATTMSFSAFAATIDANARAYERASAEQYSYPAPQAATPAYQTSYAT SAPRPGYKPLPAVPYTAGDMAQQMPVSKELGDPIFVAPQTTAVGLQIMDPIPTEAQPVYQ ETVNSVTANGNGSSYVSRYKANQLNAFDLLLNGKTYTYDLPAYTNGYQVKTASSYNRAGN GVANVFSTNVITEAVVNNNSLRITVNMTQPTAVAAAKLRSMQQSGQVASGEVAALFAYNE SYDGVKQAAHYDIFNNNGRYIVVKSGAVTVPNGAQHPYATALFAVTEDTVAAVTVSGNTA EASDLVKGTAYAIAQSAKVSNNKVSTKSKK >gi|292596540|gb|ADCV01000008.1| GENE 252 297079 - 300573 3869 1164 aa, chain + ## HITS:1 COG:BS_addB KEGG:ns NR:ns ## COG: BS_addB COG3857 # Protein_GI_number: 16078126 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Bacillus subtilis # 1 1156 1 1166 1166 454 27.0 1e-127 MSISVYYGRAGSGKTRAVYERIRQVMTDCPGEPIILLVPEPATYRIERELAEFMPEKGFT TVRVVGFGRLGYQVYQSIGSKGVGQSSLSSFGRAMLLRLVMKRKQKELGLLEQATKRPEF SSVLQQLFSEFRAFRVGPADLERGAETVKNNVLQKKLRELAICMSAYEEELSRHGERDID PIMEIVEALPQSPLMENSHVFIDGFHWFTPTHYELIYTLFDLAKEAVITIDLPMAPKALN LARRGEHLFSRPLEIYDTLVARYGFNINWVGFDGKRGPQIVQELEANYFASPSKKNTTDA TIPLIRGYNREREADAVARRILAYIESSEEARYRDVCIMLRESETYGDTLEKVFARYGIP HFIDRQRPMKNHPLGELLTALFDIVRHNYSRDSMFLLLKTDLMPLTREAVDELENYVLEF GIDHYKWERESWPYLRGFHEGQDEESHVDAPRRARVNKAREIIMDILSPWFDFAANAEGH TGAEWGTQLYGLLEILQVPERLYEWAKDAETIGDQESKASHEQMYNAVLSFIDEISMVMK DEILTLDEMMLLLEEGLSDVNYSMIPPSLDHVVITTIERGYSQWWPKVFVMGLNQGVFPQ SMGDEGLIKDKERQELADAGITLAEGALPKAFNENFLLYLAMTRASDSLTLSYAGSGEDG TGLEPSLVAKRLESLGYIDQVVDIPLSIAPDTEADYVWRPLQSLSLLSERWGALFSGYEV NPLWWGLYNWARESETYRPRLAEVSRGIRDNNDVPVITQDLVNGLFLSKGYMSGSVTRLE RYQQCPFKFYAQYGLKLEPRPVRSFGAPEIGTFLHANLERLGNYLLENNKQWRDLDEEEQ ENLCRTVADEILQENQLGEETSDAYQKAIEQRVQRTLHVTVDRLVEWSKRSDFDTKYLEQ DFGRQGGWDPIRVSLGEDRYLRLIGQIDRIDEYTRDDQTYGMVIDYKSGGAHVTAQDVYY GLKLQLMTYLLALESAYGKTHGGSMSPAAVVYSYVKNPKIPADAPISYEDAVSLANESDA WQNSGYFSDDIELLTHIDNKFLSYGSKRGPYVPIATKKDQTISSRDLRKVKSTGEFDVMC RYTNHVMAETGRHIGDGQFPIKPYQLNGLRPCTFCDYRTVCRFDSSRNRYNYLSKLSEND ALERMKEVLNDGNNSSKGGENHGC >gi|292596540|gb|ADCV01000008.1| GENE 253 300563 - 304318 4076 1251 aa, chain + ## HITS:1 COG:BS_addA KEGG:ns NR:ns ## COG: BS_addA COG1074 # Protein_GI_number: 16078127 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Bacillus subtilis # 5 1242 11 1224 1232 714 36.0 0 MGVKWTPEQESAIIAPKDSSLDNQTLLVAAAAGSGKTAVLVERIITRLKDMDNPLSVQEL MVVTFTKAAAQEMSARIGLALAKAMESTDDAALQARLERQLNLLPSAHISTLHSFCQWVI RSYFYKLDINPTARIGNEAEMALLQQEVLADLLTKSYEEGLYNIYELADFFSDDKSDAGL TAKIMSLYNYAMSLANPDGWLRKALEPYKEAMTINPSDTLWGEYMWSNHMAVIDRIRERL ERMEQILLDPTGPHKWQNIYDNQLAALGMLSAAQTWDDMGEACKHMDTFIKDQFRMGSKE AQAYDPILVAEFKSLGGQNKDDLKAMQAAIFTVPEATLQEQFKAQYPIIEGLVELTIAFH QAYRDMKQEQGIMDFSDLEHLCLALLVEPGTEDDPQPSEVAKELQDTFKEIMVDEYQDTN GVQETIINLISRIDNRFYVGDVKQAIYSFRMADSSLFMEKYNTYGGNDAVERRIDLAKNF RSDANILAATNFLFYQIMTEDAAELNYTEAESLIPGRIVEDAPEDWVGGDVELQLLDVSK DTLGASESDEDEGDDPENNERELDFIIQKIKEIHAAKKQVQNPDGTFRQIEWRDFAILRR SLAGWGTRAVEAMRQAGIPAVVNERDGYFEAQEIQLLLALLSVIDNPEQDLPMAAVLHSG LVGLDANELGALRLSGEGSLWSLMPAYAEEAQDERLLAFIGHMERWRTLSRRHGVTDLLW DIYESQDYVNYVGAMPNGLVRRANVLALYDRAKGYEASGFRGLFRFLRFVESLRDSNQDM PLANVVSEADNVVRLMTIHKSKGLEFPVVFLSGVQKRFNMMDLRSELLIDKNAGLGLKGY FPDIRVSFPTMPWFYVKDVKEAALKAEEQRILYVALTRARDKLFMTGFIKGFKNSKGVLS TIGELIKNAASVETQQLPTDIITQANTYLDWMIMGFARHLDGGNPLRVAIEYEGPTYFDL PDKQCRLKVEIHDGSLYGDLDYKADIDETTINKVRDLKAVNSVELPQKIVDRFNYIYPYN DATRRTAKISVSELKRRFQERELEAGTIDTLNEPIATVEVSADALANSVFGRKPQALQSE DDVLTGAQWGTLMHEAMQWLPLVKYTQASLTKELDALVAKGTFTEEERNLLSDTSLYKFF NSDLGKRLINAKRIERELPFSMLFEGKRVYDTLEDGENLFLQGIIDTAFEEDGEWVLVDY KTDRVTSGEELIKRYKIQMDLYKEALQRLTGMPVKACYIYSFRLHDAIIVD >gi|292596540|gb|ADCV01000008.1| GENE 254 304400 - 305341 862 313 aa, chain - ## HITS:1 COG:lin0768 KEGG:ns NR:ns ## COG: lin0768 COG1597 # Protein_GI_number: 16799842 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Listeria innocua # 1 303 1 301 309 228 38.0 1e-59 MSRCLIIINPVSGGGAARRYALDLQWKLSTLFETIEVKFTRGEGDATRFAKNACERGFDA VFCMGGDGTVNETVNGIAQGGFSCTFGFIPVGTVNDMSRALGIHQNPTQAIRRIDINETR TIDIGRCNDRYFCNNIAAGVIPKVVDEVTPKEKSILGPLAYFLRAGQALFTTKDYTYRIK TENDDFICKSPLVLALLTNVVSSFERFMPEASVDDGYMRIIIFKEYFILDILSVLPLIIS GAIYNSRYTTTLTVKKAHIELLSDVDDLSTNMDGDAGPDMPVDIEVLPRVLKVFAPAKHK KKKALNLPKLPHI >gi|292596540|gb|ADCV01000008.1| GENE 255 305550 - 306257 915 235 aa, chain + ## HITS:1 COG:SMb20773 KEGG:ns NR:ns ## COG: SMb20773 COG1802 # Protein_GI_number: 16265213 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 1 218 1 221 228 94 28.0 2e-19 MGRQSSKDKYKLSAVDSIERLPLSEQVYLTLKTAILTGELMPQEKLNEVKIAEQLQVSAT PVREAFRKLAKDNLVVIVPWKGVTVKADTPEEIVALYQVREVMEGLGARLCARHATPEQV QELRTLCKEMHEIEDATERVDVNSRFHTMIAHYSGNERIVDYLAGFRERVNRDMYISSFN AVRTHDCDDEHDQIVDAIERHDEVAAETAMRQHINNAFIFKKANAEVQHKKLNEV >gi|292596540|gb|ADCV01000008.1| GENE 256 306444 - 306827 390 127 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1667 NR:ns ## KEGG: Vpar_1667 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 127 1 127 127 235 97.0 3e-61 MHPSSTPLTELRINTYEDPFLQHQYVCLGHKIAIIRVSLNMSQQELARHIGISRSYLSKL ECGTGISGMSLEILFKIAQAFQINVGQLVRLRVVDYKNCNAHLTSHYKRLELLNHTKRTS RNKTRTN >gi|292596540|gb|ADCV01000008.1| GENE 257 307017 - 307397 380 126 aa, chain + ## HITS:1 COG:PM1630 KEGG:ns NR:ns ## COG: PM1630 COG0239 # Protein_GI_number: 15603495 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Pasteurella multocida # 2 121 12 131 134 67 35.0 7e-12 MEKYIAVALGGATGALCRMALGEWVMTKVSSFPYGTVVVNLVGCLIIGLVLGLYMQKPDL HQWARFFLVVGGLGAFTTFSTFAFEMLQLMMAESYVQALWYGAVQVVGGLILCWVGMLIV RLLCTM >gi|292596540|gb|ADCV01000008.1| GENE 258 307482 - 308462 1218 326 aa, chain + ## HITS:1 COG:BMEI1902 KEGG:ns NR:ns ## COG: BMEI1902 COG0303 # Protein_GI_number: 17988185 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Brucella melitensis # 31 325 27 320 321 106 26.0 8e-23 MKSIRTQDAVGQILLHDLVRIVIGEVKDTPFRRGHVITEEDIPKLLYLGKEHVFVMEPED EGFLHEEDVARALYHMAGGENMHDGPMAQGKIEAIADVDGLFKVDVDRLYAINSIGELTI VTRFNNTPVKAGDKLAGMRCIPLLLEEQQVEDAKKIADGKPLLHVKPFVRKTMGIVTTGS EVFEGRIKDAFTPIIEERCAEFGVTKVAHEIVTDNTDDIVAAIDKVKAAGADIIFCTGGM SVDPDDLTPGAIKRYADRVVTYGLPVLPGSMVCIAYCADGTPILGVPGGVLFSKPTAFDE IVPRLIADDEITKEDCIAMGHGGFLG >gi|292596540|gb|ADCV01000008.1| GENE 259 308883 - 311381 2871 832 aa, chain + ## HITS:1 COG:ECs4480 KEGG:ns NR:ns ## COG: ECs4480 COG5295 # Protein_GI_number: 15833734 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Escherichia coli O157:H7 # 44 336 89 385 1588 132 35.0 4e-30 MKSKQVALSLAILLALGTGTVLHVEAQGNPTEYSRHFGDENTVTSDHSLAVGFRNTVSGS YSTAVGQSSTASGETSLAIGRSAQATANNTNAIGRSARAEGENATAIGHGSVSSGRNSNA FGSSAKASAEASTAVGNSTKASGISSTATGFNAEASGNFSSAYGNDARAKGNRSVAVGYN AKAEESATAVGNNANAGAANAVAVGSGNTITARSGVGIGSSNSVSGIDSGAFGARNNVAQ ANTYVLGSNVTSTQGNSVLLGNASTDRAATTETQANINGINYSGFAGVGSARNGVTSVGA SGKERQVINVASGKVSSDSTDAINGSQLYAVANTVGGILNNHNTLIQNNINEIDKNKEKI ADNERKLKDHTDVLQKHEDILNGHSQELEKHNKLIVNHDNQITRLTKENLRQDADLLRHE DQIQNHDIQLKNQTERMNNQEKRIDNQDKRLDYLDNRVDNHDARIENHSERIESHERRIE YNKTLATEALKEAKKHTSISAGNNVTVTTSTNAAGGTDYKVSVDKVKFGNVSLDNKGLNN GGNKITNVADGEVSATSKDAVNGSQLYQATSGISNGVNLLNSKIGKVGAGAAALAAIHPL DFDPDDKWNFAAGYGNYAGENAMALGAFYRPNEDTMFSVAGSMGNGENMVNAGVSLKLGQ KNGVSTSRVALAKEVQDLKAIVKAQNVEIQQMKVSMGMAPQYDKKDVNFPDVPANHWAYE YVKDLADKGLVEGYPDGEFKGNRAMTRYEYAAIIYRALQLGAPIDGKMGRAINEFNPELA RLRDLDRTRVDRISGKDNDRHKVERLRVNNKDNKQTNDYRDVYGSHIERNAK >gi|292596540|gb|ADCV01000008.1| GENE 260 311516 - 311746 379 76 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1663 NR:ns ## KEGG: Vpar_1663 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 76 1 76 76 145 96.0 5e-34 MSRIHKEHLQAGYIFGDTANQEYIYLPSGEVGTDHPLAVLETPTKREDITLDEAVHMIDT LTLKRCSHPTLGKKSF >gi|292596540|gb|ADCV01000008.1| GENE 261 311756 - 312601 744 281 aa, chain - ## HITS:1 COG:CAC0640 KEGG:ns NR:ns ## COG: CAC0640 COG1768 # Protein_GI_number: 15893928 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase # Organism: Clostridium acetobutylicum # 1 275 1 223 231 143 33.0 3e-34 MKVFAIGDLHLSGNPPTKPMDIFGPHWNDHWARIKEHWNANVSDEDIVFLVGDMSWALRL EEAACDLQEIASLPGKKYMIRGNHDYWWASANKMHNLMGDAITFIQGHGTAELIQTEEGP RLIAFGGTRAYLCPGDSHFSPETDQSIYDRELMRTEAALQEMDKAIHNMLEELKEETKVT DVTCSKKAYSSTSDSITTSSLIIDIENIPVTKLLLLHYPPFNESNAPSGFTDLMEQYKVD ICIFGHLHDQISFNRIPKEFGTTKLELVSADYLDFKLKQII >gi|292596540|gb|ADCV01000008.1| GENE 262 312678 - 313451 733 257 aa, chain - ## HITS:1 COG:L51063 KEGG:ns NR:ns ## COG: L51063 COG1085 # Protein_GI_number: 15672818 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Lactococcus lactis # 4 235 8 239 261 179 40.0 7e-45 MNKPLRFNIELGRTKPVNIRNEQVRCPFCDRSKLTDILDTSGHIIWLMNKYPVLEKTWPT VIIETETDEGEFSTLPTDEAAHILQFGLDKWRETRQRKEFKSVLFFKNYGYMSGGSIRHP HSQIIGLENYDYHKDITAQNMEGWLLHEDQDVRITLSTHPIIGFFEYNIRFKPDAPVRAV ALRLQQILRYVLHSVVNFSQSYNYFVYNLEDGYDYIKVVARYVTTPLYVGYKIPQTCDEG RAAKIKHDITPYFQATK >gi|292596540|gb|ADCV01000008.1| GENE 263 313569 - 314090 666 173 aa, chain + ## HITS:1 COG:PAE2253 KEGG:ns NR:ns ## COG: PAE2253 COG0494 # Protein_GI_number: 18313213 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pyrobaculum aerophilum # 5 140 6 140 157 86 37.0 2e-17 MKPTTLVFPIDEQNRILLGRKKRGFGADKYNGFGGKLDDGESFRECAIRELFEESGLQGR VEDLECVAAFDFQFPFDESLTHVSYVYFLRAFTGDVEETDEMEPHWLEPNQIPYEHMWDG DRRWLPMLLEGKKLKGPIVFGRDNNMVDKMDLTTVDTVLESEHLARIDLYING >gi|292596540|gb|ADCV01000008.1| GENE 264 314217 - 315314 1031 365 aa, chain + ## HITS:1 COG:BH0931 KEGG:ns NR:ns ## COG: BH0931 COG1194 # Protein_GI_number: 15613494 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Bacillus halodurans # 13 362 17 356 372 275 39.0 1e-73 MTDKKNPKWVPQLLAWYDVHKRELPWRGCGDPYKIWVSEVMSQQTRIEAMKPYYDNWMRL FPTLEDLAKASEDEVVHAWQGLGYYSRARNLRLGVKDVVENYGGIVPHDRKTMESLKGVG SYTAGAVLSMAYNEPEVAVDGNVLRIYARLYRIFDDILSTKGKKAITAIVEETLPHDRPG DFNQALMDFGSAVCIPKTPRCGECPIVNMCEAYQHKDTDKLPVRIKKTKVVEVPLFVGIL QYKGYYLLHKRPNRGLLRSMWEFPSVEMVSAFEDGERGLEELVQALGFDLFLQPVLVKEI THVFSHRKWFMKAFRGDLTYTGDTNNISIADIQQQLPKDWMLIKRDEFSDYAWAGPHGKL TEIAK >gi|292596540|gb|ADCV01000008.1| GENE 265 315331 - 316512 1123 393 aa, chain + ## HITS:1 COG:Cj0846 KEGG:ns NR:ns ## COG: Cj0846 COG1408 # Protein_GI_number: 15792184 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Campylobacter jejuni # 42 388 42 370 374 110 30.0 6e-24 MRILFNIIFSAILAIGLVGFWALFLNLWKPKKKWPAWVGYIIIIGAWFAAIRYYILNQVD LYGTMYYPLMNMFRTESYGLLFGVFLAIPVFIILSLLYWTINKIWSKTPEENRTGRRAFF RTAATIVPLATIGGSSYAAFAGQQEVVVTHESFGYTNLPPGLKNYKIVQLSDIHIGPSID LDDFDEILKLALLQKPNRVVITGDLIDKLAWLPQVCERLTTFAKQIPDGVDFILGNHEYH HDVNKVLDALKRNTPMNILVNSNIQIMGGKQPVYIAGVAYDNDRKKDNREAMINKALSGI PDYAFVILLAHHPEFFEESIERKIPLTLSGHTHGGQIVFMGMPLVPTGTPYTKGRYVEEQ SVCYVNNGTGHWFPIRINCPREITVITFFDGVA >gi|292596540|gb|ADCV01000008.1| GENE 266 316612 - 317967 1419 451 aa, chain - ## HITS:1 COG:HP1325 KEGG:ns NR:ns ## COG: HP1325 COG0114 # Protein_GI_number: 15645938 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Helicobacter pylori 26695 # 1 448 1 453 463 459 48.0 1e-129 METRIEYDSMGPVEVDARRIYGPQTQRSFNNFKIGDHRIPIEQIKALALVKKACALTNAK CGAVTEEKAKLIAQVVDEIVDGKWDDEFPLTVFQTGSGTQTNMNVNEVIAHRAKQLDESN PLHPNDDVNRGQSTNDTFPTAMHICAYFEITKRVIPALDGLIGSFEKLQEKGKGLQKVGR THLQDATFIMVDQEISAFVDGLKTAKTMLLQNADHLLDVALGGTAVGTGVNTPKGYLDVM ETVLPEVTGAPFRVKNNKFQGLALKDAFMMAHGALNTLATTLFKIANDVRFLGSGPRCGY GEWHLPENEPGSSIMPGKVNPTQCEALTMVCAQVFGHNTTMTLCAGSGAFQLNVYMPIMI YDFVESCRLLADAMNSFTTHCIDGVEFVPEKLNFFVEQSLMIATSLTPYIGYDKSAKVVK EAYKRGCSIKEIILEEKLMTEDEFAEAVRMK >gi|292596540|gb|ADCV01000008.1| GENE 267 318416 - 320494 2761 692 aa, chain + ## HITS:1 COG:NMA0207 KEGG:ns NR:ns ## COG: NMA0207 COG1297 # Protein_GI_number: 15793232 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Neisseria meningitidis Z2491 # 14 674 14 668 672 619 56.0 1e-177 MKHDFTSHDLHLPELTLRGMLLGALITVIFTASNVYLGLKVGLTFSSSIPAAIISMAILR FFKDSNVLENNMVQTQASAAGTLSAIIFILPGLLMLGYWNGFPFWQTFLLCACGGSLGVL FTIPLRRAMVVNSDLPYPEGRAAAEILKVGSHNGEQGPQSSSGMTDIVSGGFVAGLISLC ANGFKVLGDSMSFWIPVGSKGITQIPLGFSTALLGAGYLIGIASGIAILVGVLIAWAGFV PYFTNMFAPDGGATAKFAMAIWKSKVRFIGAGAIGIAAIWTLITLIKPIIEGMKISVKSM NSSSAERELHRMDTDMSTKSVLGVFILILIGLVFTFWDFVSVVPISAGLMWTLVVVGIVV ALLIGFFVAAACGYMAGLIGTSASPISGIGILATIISSLVVYFIAAENNLFATQEGVQFA TAMAIFMTSVVIAIASISNDNLQDLKTGQLVGATPWRQQIALLLGSVAGAIAIAPVLNLL YQAYGFTGALPRAEMDPNAALSAPQATLMTTIAQGIFNSSMDWDYILIGVGVGVVAIIVN LILKSTTATLTLPPLAVGMGIYLPPTLEVPLIIGSFISYFVGRYLVARAKMRAGELADYD VEQSNRRGVLFASGLIVGESLIGVIIAVIIVLSVTTGGGEAPLELVGPEFESTAQWLGLL AFIFAGLYLVRRVVTHKFNKEEALAMKAEQEQ >gi|292596540|gb|ADCV01000008.1| GENE 268 320506 - 321351 1171 281 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1655 NR:ns ## KEGG: Vpar_1655 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 281 1 281 281 478 99.0 1e-134 MKLKQSVLIIMAAALPVVSFAASEVIPVTQDTVNVQANQTNAKRVNRNDLTYRISSTATP EQNRALRSKASKVDRNAVEVVAPNADRYMDRKEVAVSPVESTTDHLDLVFPEVKSVSPAV EKAINTTIKKYVSKIQNDVEKLNAKESDKTNVVMYYDVKTDKNGIFSVLIHTYTMRDHDA NGVNYVKGFTFNTTTGRQLSLYDLGGLNKKELVNAINNNQDVKDKLGGDVNIDKMPTEFY TTDDYSVVMILQQDVDSIHSAGTVYVPVGILRDRENDVTKK >gi|292596540|gb|ADCV01000008.1| GENE 269 321445 - 322815 1504 456 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1654 NR:ns ## KEGG: Vpar_1654 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 456 1 461 461 763 95.0 0 MYKNTPHALRALVLGTLLTTTGFGFASANTTTTTHAPATTVEATKMETTKAPMAKTDATK METTKTEAANVKSTNTASPAIVNTSIGTPQDIQKIRAHIFTDVPSDFWAANSISTVTKAN LMKGYSDGTFRPNQPMTREEVAALFNNITDDGTAAFLSSKFKDITSDRWSALAIESVARK NIISGYGDDTYKPEKYMSRQEFAVVADNYIHYLGYTTEDPTVLDNIAYGDQKFVAPWAQD AVRELAYLGFTNYAPGTLFNPEKYVTRAEAAEIAYRMTQTEQALAFHNTLFKQQVENKTA NIIDKALGYGNDFTKFRQDGALFWEAGQLHASLTDQKKTDLVSKVITEAHDPQLDRTVVV SKGKLNQAQLEEYQSDAIALYQQKEPQGKILSISPNTDTSALLITVDSIQKSTLKAFKKK FHDNVFLQLPPEPLTKSDGNIQFPLPPRVNYYNDKQ >gi|292596540|gb|ADCV01000008.1| GENE 270 322999 - 324747 2361 582 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1653 NR:ns ## KEGG: Vpar_1653 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 582 1 582 582 820 99.0 0 MKLNKLSLSLAITLALGSTFSMAHAETTATHIKSEVSNVATRAEVSAKADEHRVDTSVKN DTKRIDTSVKNDAKHGSTVVKRDAKHADASAKNAAKRTDTSVKNDAKRVNTSVKNDVKRI DTSVKNDVKEDAVKVEGKKAVKAKENLPAGIYPDTKDNWARDAIQAMTQAGYLSGYADNT FKPSAQITREQAAAIYGKVLQHNLNEQELAEIATKESSTSYSDVEADRWSSSAIKLVSAA GVMEGTSKTAFTPSKTMDREQFVASAASLAKKLNLSTPVKAEKVTFKDEASISSAYLADI QYMAQRGIVASGATENFNPKQPVTRAQAATILNRMLNGAGLATPKHSTTEAKAETTVKED IKKADTAIEKEASKVNKDAKKDMSKTDKDMKKEAEKADKVAKAEAKKADKDLKGNKNAAV AEKAEPTHTVRPVRRSTLKALDQKQQAALEDKVFSELNKTYKTEDAFQNYGVMYWRDNQL HVALKTDSDISTVKANLANRGDSTVNNYVVVESSQYSQAEYDAIDTNFRNYYNKNEKAGT ILATFPDVENNQLYAVVSTASKETQQGISKLFGSKVKMTVKR >gi|292596540|gb|ADCV01000008.1| GENE 271 325271 - 326008 996 245 aa, chain + ## HITS:1 COG:BS_yvfV KEGG:ns NR:ns ## COG: BS_yvfV COG0247 # Protein_GI_number: 16080458 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Bacillus subtilis # 1 245 1 238 238 259 53.0 3e-69 MKIHLFQQCLIDMFYPHVGMAGVEVLERLGCELVVPKKQVCCGQMFTNSGYNDAAMDAIK NTIECFENAEYVVSMSGSCAFAIRDEYHHFLKDQPEWLARAEKLSGKIYEFTQFITDVLG VEDVGARFNESVTYHTSCHVTRLMGIKEPPFKLLKNVKDINLIELPRADRCCGFGGTFSV KNPEISEVMTREKALEIAGTGANVISGSDQACLMNIAGMLDRLHKEGEIDRRIKVMHIAE ILNCR >gi|292596540|gb|ADCV01000008.1| GENE 272 326021 - 327466 1881 481 aa, chain + ## HITS:1 COG:ykgF KEGG:ns NR:ns ## COG: ykgF COG1139 # Protein_GI_number: 16128292 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Escherichia coli K12 # 1 478 1 473 475 455 45.0 1e-128 MALIYDNRPYKTRIKECLADDFKVAAIKKAQDVFYDKRNTVVADVPEWLDFRAEAAKIRD HVLNNLDYYVSQFADNAEKAGSKVHFAFDDKEATQIALDILRQREAKMIVKSKTILTEEI GLNEVLEEAGIEVNETDLAEFILQTAVSPPSHIVVPGLHFERNKIREIFAEKLGYTGTEN PTEMTHFVRGYVRERFLKADVGVNGCNFAVAESGTCTIVSNEGNGRMASSIPKTQLIFLG TERIVPDFKALDVMMEMLNRSAVGSKISNYFSMMTGPARPGEADGPEETHIIIIDNGRSG ILGGTFQEMLRCIRCGACMNICPVYRHVSGHGYGSVYPGPMGAVLTPLFKGYDVAGDLPY ASTLCGACTENCPVAIPLHELLMEHRHIMADIEKTRPKAEEAIFTAAAKMFGNATLFDLG TKAGAIGMNLISNKEGNMPEWTQAIPVMNGWTKSKELGSLKFKKFRDLYAEHEKNKKKEK K >gi|292596540|gb|ADCV01000008.1| GENE 273 327466 - 328194 1021 242 aa, chain + ## HITS:1 COG:BS_yvbY KEGG:ns NR:ns ## COG: BS_yvbY COG1556 # Protein_GI_number: 16080456 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 3 241 6 238 240 151 35.0 1e-36 MDVAKRNQFIARLSRALGRDQEMCPAFVEGFDYSHGPQETMFQDLSRDQILTMFKEQCQR VGTKFVETTPDKLGETIFAAIEDWGNGKIVFPSSPEVEEYKLKELFEQDAANNGGTRTYF QWDPAKGREECISNTANADIGITFPYCGIAETATVVQASGEDSGRAISLLPTTHIAVLYT DTINPRMTQTMEHLAERYHNDPAKFPTNICLISGPSRTADIELVTVDGAHGPIQVTYILV NR >gi|292596540|gb|ADCV01000008.1| GENE 274 328371 - 329762 1808 463 aa, chain + ## HITS:1 COG:Cj0025c KEGG:ns NR:ns ## COG: Cj0025c COG1823 # Protein_GI_number: 15791424 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Campylobacter jejuni # 1 457 1 461 461 289 40.0 1e-77 MNIPFFTDYLMLSNPLSIGIIAVFVLVLIGIYVLQRKGTSFGNLVIIGTIAGAVLGIAVQ IIAGFPDDPSKVVYIKESTKWFSLVGGGFIDLIRMLVIPIVFISIVHVILHMEAGANLKK LVVAMISTNLGMVAVAAIVGLILGNAFGLGQGFDIVESGKKIREIKPMVDTFRALIPSNP IQAAAETNVIGIVVFAIILGSVARLLKQTGTNSMEVFTKLFDELHQLISWVADFIIGLMP YGVVALLASTLATRGVQAILDMGLFVVLLYVGLLIMFVVQAILITSFGYNPITYFKKAKA PLLLAFTSRSSMGVLPLTVETLTKRLGVNATTANTVASFGTTAGMQGCAGVFPALVVVYI SNVANIPFDMTMYIMSVIVIAIGSVGIAGVPGTATMAASVSLSGTGLGAYFTSISPILAI DPLIDMGRTCLNVSGSLTNALVVDKIMGTIDKDAYNNPNEGRV >gi|292596540|gb|ADCV01000008.1| GENE 275 330013 - 331566 1804 517 aa, chain + ## HITS:1 COG:CAC0094 KEGG:ns NR:ns ## COG: CAC0094 COG0155 # Protein_GI_number: 15893390 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Clostridium acetobutylicum # 4 501 2 499 516 328 36.0 2e-89 MITQELKDRLIADYPKFEDMTHKFYKKELSIADYKGQSGAYGSYAERGANTGMSRWRFNG GRMTREHMQFLADSIRKYNLQHVHFTTGQCLQMHGLDGDTILKLYKECYDHGIYNRGAGG DNPNVVASILRGIDPRETLDITPYATAISEFLMEQMFYIKIPRKFKMGIDNGFDSTPHST FKDLGFNLTKHNTFDVYACGGIGPNPRIGIPVAHDVAPEDVLYHVKAMLMVFANHGNFKN RGKARTRYMPAEMGGAEAFIKIYEETLAMVKEVEHLTINPADYAYEITKTGKRDDSVENY RIHRQKQDGLYYVEYHPAGGDANVEHLLAALDYAVTLDQVEARIAPDQALFFINLTADEA RKIAELTDDSAKNDFRRSVSCVGSTICQIGMQDSNGLLKDIFAHLEEKGVDTRKLPRLHI SGCPHSCGTHQIGEIGFHGAVKLVDKKPMVAFILVDGGSEHMGSENFGKMAGNIVATKIP EFLESLANILNESPEPDFGTWRLTHKGDYMNLIKAFE >gi|292596540|gb|ADCV01000008.1| GENE 276 332248 - 333063 811 271 aa, chain + ## HITS:1 COG:CAC2933_2 KEGG:ns NR:ns ## COG: CAC2933_2 COG0778 # Protein_GI_number: 15896186 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 78 267 6 193 195 159 40.0 6e-39 MLFTVNTEVCTRCGLCVADCPTGLLVMSDAGPVTGRGGCISCGHCISVCPTLALDSDMTP RKEQIDITKEPKLTPEQAELFMRSRRSIRNYQNRPVPVELIRKVLNVARMAPTATNTQGI SYIVIRDKQTLRRIADLVLEWMHLAAKTVPIMRLYARAAQAEVDKGKEYILRDAPALVVA IGSKKDIHRTHDSGHSCLSYAELYAPTLGLGTCWAGFFEHAGEAEYQPLLDELGVPDDKI VAGGILMGYPKVRYRNIVERQPLDVTFDTEE >gi|292596540|gb|ADCV01000008.1| GENE 277 333136 - 333954 1085 272 aa, chain - ## HITS:1 COG:BMEI1954 KEGG:ns NR:ns ## COG: BMEI1954 COG1464 # Protein_GI_number: 17988237 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Brucella melitensis # 6 271 9 267 268 212 42.0 5e-55 MKLKTLLAPLLIGALAFAIAGCGSTSNQSTQTQKEIKIGATSGPHAQVAEAVAKEAKKQG IDLKVVEFSDYVTPDKALADGDIQLNAYQHVPFMENFNKQNGSNLVAIGKTILVRMGLYS NSVHSVQDVPEGATVSIPNDPTNGGRALALLAKAGLITLKDGVGFKATVADITSNPKNIK IQELEAAQLPRSLDDVTIAVIPMNYVQSAGLSVEKQGFFFESKDEPLTVIVLAVRSEDKD NETYKKIADIYKSDAIKQYIDETFKGTITTAN >gi|292596540|gb|ADCV01000008.1| GENE 278 334216 - 335382 1552 388 aa, chain + ## HITS:1 COG:CAC3392 KEGG:ns NR:ns ## COG: CAC3392 COG1979 # Protein_GI_number: 15896633 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 388 1 386 386 468 58.0 1e-131 MYNFDFYNPTHIVFGKDRLDELDTLVPKDAKVLITYGGGSAVHSGLIDRIVKALGNRKVE QFGGIEPNPSLETCERAVAFIKEHGVDFVLAVGGGSVVDATKLIVMGATYDGPVIEVMKV GVREVPVDMVPNPLPFGTVMTLPATGSEMNNGAVITYGDGKYPVFSSLVFPKFSMLDPTL TFTLPERQVKNGVIDTFVHTTEQYLTYPVEGRIQDRFSEGILKTMIEIGKETVENPENYD IRANHVWASTLALNGLIGAGVPQDWATHLIGHELTAAYHLDHGITLAIVLPALLEVKKAD KLEKLAQYATRVWHITEGTNEEKADKAIAKTREFFESLGVSTHLKDYGLGEEAVDKIVKQ LEDHGMTQLGENGDVTPEVAREILMRAL >gi|292596540|gb|ADCV01000008.1| GENE 279 335483 - 336148 636 221 aa, chain + ## HITS:1 COG:BS_azlC KEGG:ns NR:ns ## COG: BS_azlC COG1296 # Protein_GI_number: 16079724 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus subtilis # 2 214 37 245 254 140 39.0 2e-33 MIPMGLSFLFLGVGFGLYATSQGFPWWTAPVLASTIFAGSMEFVTIGLLMAGFDPVNTFM LTLFVNGRHFFYGLSALQRYVHMGWKWFPTVAWMCDESFAINVSTKLPDDVDEKWFYFHV SWLNYIFWVVSTLVGGLFGDLLASVDLRGIGFVLPGLFIVIFLEMLFNAKSNNIRGLGAV GAVVALAMLLLTGKSLFMLASMGCMLVVCYIAYKWGGVRLD >gi|292596540|gb|ADCV01000008.1| GENE 280 336141 - 336479 347 112 aa, chain + ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 1 108 3 110 110 99 53.0 2e-21 MTSLEMVITVAIVVAGTLLTRFAAFLIFPPGKKAPDFVLYLGKALPAAIMGLLVVYTFKD IVVLIYPYGLPELIAFLVTVGLHMWKRNMFMSIGAGTVAYMILVQAIFNVTR >gi|292596540|gb|ADCV01000008.1| GENE 281 336535 - 337386 925 283 aa, chain - ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 10 263 8 264 286 256 46.0 3e-68 MEERMDFRILNNSSFIPSIGYGTYKTGSEGETEQAVTNALNVGYRLLDTAAYYGNEEAVG KGIKASGVKRTDIIITTKIWHTNAGYDNTMRAVESSLKNLDTNYIDIMLVHQPLGDYYGS WRAMEELYDQNVLRGLGLSNFYEDRLIDLLYHCNVKPVVNQIECHPFNQRQSLLQLMRKH QVVGMAWSPFTRDRQPIFDHPIIKSLAEKYGVSKHQIILRWHIQRGIIPLPKANNVSHME ANFDVFDFKLTNIDMDVMELLDQQDFLEDHHTAPGLERLLQLK >gi|292596540|gb|ADCV01000008.1| GENE 282 337498 - 338613 1334 371 aa, chain + ## HITS:1 COG:mll1427 KEGG:ns NR:ns ## COG: mll1427 COG0845 # Protein_GI_number: 13471453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Mesorhizobium loti # 27 362 65 391 421 90 26.0 7e-18 MKLNRFYSVVAMLGVVMMALAIAGCGTKTVSVADVTYKDMPLQIHNDANVTALNKATITP TLTGQVVYAVKVGDQVQQGQTVATVDTSALQQQLASLQGQLAQAQSQSYATAVTTTTAAS IDSTQLEQAQRMREAGIITQKEYDRILERSQPQTTTVTSGGGGGINTAAIEAQIAQVSAQ MAASTIVAPIAGTVTSIYNEDRQMAIADRPFMMIQQSTPMVASLSIPRDAAMKLGTPEAK NGMKVLLKVGDQELPGELTYVDITQPENVPSVLVKATFNNEKGLIKAGEFYTLVIESNVK AKMLTVPTKAVRENQDGKYVYVLTENNTVDVRVVEVGITEGDDVAIISGLNEGDKVITTD GTFVLGESVKL >gi|292596540|gb|ADCV01000008.1| GENE 283 338838 - 339650 1136 270 aa, chain + ## HITS:1 COG:jhp0277 KEGG:ns NR:ns ## COG: jhp0277 COG4866 # Protein_GI_number: 15611347 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori J99 # 1 261 34 290 290 150 38.0 3e-36 MWQDPYGIRWAEENGVLYIQGGGKREPFLLPPFAGKDAKFLDGLLRAKEWFVENKLPFRF KGVSKDVKERMEDLCPGRYAFTPDRDNYEYIYKSEDLINLSGKKFRQKKNHLNQFRMQYS NYEYVPITDDIIPLCRETAASWVETHHEEGIEDELVAINLLFDNWDVLGLKGGAIKLFGR VEAFSIGELLNDRIALIHIEKANPDIRGLYQAINNEFIRHEFSEVEFINREEDMGLPGLR QAKESYNPDHFAEKYDAVYANEADNATGGK >gi|292596540|gb|ADCV01000008.1| GENE 284 339856 - 341049 1301 397 aa, chain + ## HITS:1 COG:BH1812 KEGG:ns NR:ns ## COG: BH1812 COG4552 # Protein_GI_number: 15614375 # Func_class: R General function prediction only # Function: Predicted acetyltransferase involved in intracellular survival and related acetyltransferases # Organism: Bacillus halodurans # 30 390 23 379 386 114 25.0 3e-25 MEFRIATAQDTSHVENLWAYCFEPKEDPFFQYYFTNCYEPENTMVGLEQDQLLSTVHLRQ YNLNVRGAVLPTSYMVGVATHPAARRGGVGGALLTAALEELRKRGQAMTILMPSKAAFYQ QYGWELYAHQWVNTMSLEDLRPMTDKTLSFGLLNSVDQWTLLDPVYKTYTARLSGYAERG EKEWKRLLGSFFAEGVNVAVVRNDDHVIEGYAVYRLGQPEIPVSELVYTTRRAQRALLNY FYNHRSQGTSIRWNEGLHDTYYRFYPDGRTGHATMPYMMSRIVDVKAAFEAIPVNQETLM MPITMTFAVKDGLCSWNEGRYEVQYGSALTPSVKKISDTIEGETDITIEVGALSQLLMGT ITARDLAFEGKLSVSEEWLDYFDILYPEQKTYINEWW >gi|292596540|gb|ADCV01000008.1| GENE 285 341051 - 341920 229 289 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 37 278 38 277 287 92 29 2e-17 MSWKTYTVKEPTELTVSKYVKERFSLSSRDIQMMFRKKRVKVNSRVAHSQRALKKGDVLT LELPQDKDYGVDVEKGPITVLYEDAHTLVVNKAPFMLVHPAGQTKSCTLSNYIAGYYAKK GVVHKVRPVHRLDRETSGCILFGKTKEAQQYYTDELQAGRIDRIYTGLVEGHIDADGMVD EPIGVDPVFDNRRVIDEFGQPAQTEYTVLGYEGDNTLLRFKLLTGRTHQIRVHMEHIGHP IIGDAMYGTRNKPYTRQCLHASELTFVPYGKDEAITITCEVGDNFGREK >gi|292596540|gb|ADCV01000008.1| GENE 286 342236 - 346816 5947 1526 aa, chain + ## HITS:1 COG:sll1502_2 KEGG:ns NR:ns ## COG: sll1502_2 COG0069 # Protein_GI_number: 16329610 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Synechocystis # 412 1203 6 801 801 926 58.0 0 MDMKQSTIEQQRLDQARLEANGMYSSQFEKDACGMGFVVNIKGKKSHDIIDDGLRILERL EHRGGAGADKDTGDGAGILVQIPHEFFKRECEVLGINLPAAGEYGVGMVFAHKYESLRNE QKRILEEVVREEGQVVLGWREVPVDGTKVGKEAAAIRPWMIQILIGKGPDVTNNKEFERK LYIIRKLAEKRIIPLSKELSSDFYIASLSSKTIVYKGMLTPGQLRDFYLDLSDLDFTSAL AMVHSRFSTNTFPSWARAHPNRFLVHNGEINTIRGNVNWINAREGKAESPLFPDIKKVFP VVDDSGSDSAMFDNTLEFLHMTGRSLPHAIMMMIPEPWERNNLMSQEKHDFYEFNSFMME PWDGPAAMGFTDGTVIGGVLDRNGLRPARYYVTTDDRVIMASEVGVVNENAENIRAKGRL EPGKMLLIDTAEQRIISDEEIKHRVATELPYNEWVKEHVIHLSEITQADESTIPTVDDLF KEQQAFGYTQEDLVRMIVPMAKDGKDPVGAMGADAPLAILSDKPQLLYSYFKQMFAQVTN PPIDSIREEMVTSTRVMLGNSGNLTEPNKAGTYALSMRTPILTNQELASIKALDCRRMKS VTLPILFDPTKGAEGLRDALDELCAKAEEAARTDQNVLILSDRGVDEHHAPIPALLAVAA VHNHLISKVLRTEIGLILESGEPREVHHFCTLIGYGVTAINPYLALETVRDLQARKRLGD ITPEQAEKNYIKAAVGGIMKVMSKMGISTVRSYHGAQIFEALGLNTNFINKFFVNTPTRI GGIGLGGVAHEALARFERAFKSDETVLEPGGWYGPVKDGEEHLFNPKTIELLQESLINGD YTKYKEYSKAIRNDYHVTLRSLMELNYPVGGGIPIEEVEPEESIVKRFKAGAMSYGAISK EAHEAIAIAMNRLGSTSNSGEGGEDVARFKPLPNGDSMNSEVKQIASGRFGVTANYLINA KELQIKCAQGAKPGEGGQLPGKKVYPEIAKARHSTPGVELVSPPPHHDIYSIEDLAELIY DLKCVNKDARISVKLTSEAGVGTIAAGVAKAKADNILISGYDGGTGAAGRTSVKHAGVPW ELGLSETHQTLMLNRLRDRVQLEVDSKLMTGFDVAVAAMLGAELFGFGTLPLVAVGCKMA RVCNLNTCPYGVATQDEKLRARFTGKPEYVENLMIFIARELREIMARLGIRSVAELVGRI DLVRQKSQDDNFKLSRVDLKRILFRPYIDSSVGHMHMVDQDHELERTLDMSKLLRMCRPA IEDQKPIRAKLAITNINRVVGTLVGSEVTRRYGERGLPDNTIKLNFEGSAGQSFGAFIPK GMTLELEGDANDYLGKGLSGGTITVYPPKASIFEADENILIGNVAFYGATSGTSYINGVA GERFAVRNSGITAVVEGVGDHGCEYMTGGEVLVLGKIGRNFGAGMSGGYAYILDCDERYV NPGLVELRPANNDDLKRIKELVEQHVLHTNSAKGRHILENWNNFVNRFTKVVPVAYEEMQ AAIERFKEQGLSLEEAQLAAFKEKYA >gi|292596540|gb|ADCV01000008.1| GENE 287 347200 - 349878 3331 892 aa, chain + ## HITS:1 COG:BH0034 KEGG:ns NR:ns ## COG: BH0034 COG2812 # Protein_GI_number: 15612597 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Bacillus halodurans # 1 415 1 429 564 328 42.0 3e-89 MAYIALYRKYRPQTFTDVVGQHQVSDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFAR AINCEQGPTDHPCNECSACKSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVEGRK KVFIIDEAHMLTTEAWNALLKTIEEPPAHVMFIFATTEIEKLPVTIVSRCQRYTFRRITS DDIAQRLSYVAEKEGFGLDSAAAQLIAVHADGGLRDALSILDQCAGMATGSITPQVVEEL IGLVSKEWIIHFLDALRNGDGPKVLSYVHDALAEGRDATQIMEALIQHVRALLVGKVAPD ADELKVYDAFKNEFLAQANSVDFNELNQYVRSAQSIMNDAKQVDNPRTIIEMGLLVLCAK LGSVDESLEDRVYALESTERSERNDLLNRMAQLEQRGPAAPTPAYGANAFGPPSGYANSF VPVDNGAVQNTSMSSIQNTAGDTVPPPSSVGMIPPPASVGMTPPPMGAPGSTPPPMNGVG MAPPPMGGVGMVPPPNSGDTASRKPTKNQAKGRGKKGISTQAIISDQILSAQEYRNVQSN VIKYLKDSNRNMTSTVIGQGQLVYVDQSKAVMAFKNTLHLNVMTNEVNLAEAVDAFTYTL GYAVHVEIVDALTQVYKDYKKAAGSTTQRQVKAPQRPQEPMVDVKTTSGGQPTQMDLTND PQESKPDSAAVDAAKAAAMAFLAKKTGGAVANTAVSDSANTTTITASETAVGADVETEPA FGSDVPITTFDGSPSNQVPDGEIPIESLAGSIEGDDIPVHSFDDVPIDDMEDSYVSSLDD MPPHPLDSVTVISEDGEVLERPMDSGAHIEVEAVPKSDGGEPHEETLHQSDDKVMLSSAP IEVEAIDSVTVAREYAWDPEHMTEEERNNPLLAETLEKLSEDHDIIVEVIEE >gi|292596540|gb|ADCV01000008.1| GENE 288 350020 - 350349 196 109 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 6 105 8 107 114 80 38 1e-13 MFGKGMGNMTGMMKKVQKMQADMKKMQEELKTRTVEASVGGGAVTVVMNGEKIIESLKLN PTAVDPEDVEMLEDLVMAAVNEASKKVDDLLAQEMGKVTGGLNLPTGLF >gi|292596540|gb|ADCV01000008.1| GENE 289 350350 - 350946 909 198 aa, chain + ## HITS:1 COG:CAC0127 KEGG:ns NR:ns ## COG: CAC0127 COG0353 # Protein_GI_number: 15893423 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Clostridium acetobutylicum # 4 196 7 198 198 218 49.0 7e-57 MTNALERLVEQLRRLPGIGSKSARRLAYHLVEMPKEEVDRLVETIVEAKGATRHCSICFN LSAQDPCEFCSNPNRDQTTIMVVETSRDVIAIERSGDYKGLYHVLEGALSPMEGIGADDI RVKELIARLRDGVVQEVILATDPDIEGEATALYLARLLTPSGIKVTRIARGVPVGGDIEY ADELTLGGAVVNRQEMKG >gi|292596540|gb|ADCV01000008.1| GENE 290 350951 - 351202 334 83 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1633 NR:ns ## KEGG: Vpar_1633 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 83 1 83 83 107 100.0 1e-22 MGALLASPIISAVISIAVAYIAFKVAFFTIKRVAMNVVIGGLTYWVCVHVLEIPMDIGVG IWALTAILGPIPMVLAAIYYGIK >gi|292596540|gb|ADCV01000008.1| GENE 291 351215 - 353803 2935 862 aa, chain + ## HITS:1 COG:BH0648 KEGG:ns NR:ns ## COG: BH0648 COG0210 # Protein_GI_number: 15613211 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus halodurans # 3 463 20 444 747 179 30.0 3e-44 MLINREQQRVIDEVEQNILLLASAGTGKTNTLAYRVAHLIEGGYAKAENILCMTFTNKAA NEMKGRIQSLVGSPAKAVEVSTFHSFCFFILQQEGKRNETLYTDVTIFDEEDCKELSEPY RPGKLREMSFANVIAMVKEYRSLYGFYSDDLLGDYKRTIERLQKEQREAIEQQFSSFGNV LYSELNDFLNHGHEWIAAYDESLASVHGLDFTDLICGVHRLFQDPVVRERWRSRYSYISV DEMQDTGVLEYKVLEMLWEGNHVLLCGDYFQTIYEWRGSDPFRLLKQFDADFKPLKIIFY ENYRSNWTLFTMAFKTLQNMFPDLVGSIYTELPRANSESKGKPVLIKGCKNSYLEGRYIY EAICALPKDANIGVLVRDNKKAQQLSDSFERLNGERPEEERRHFMIIDEFKFFRRQEIKD IMAYFKLLMNPNDSVSAKRIIKRYVAGIGDARIAAIESPETRQVGLKLTDFMDMPIFEAE PYAKLVSGLEQHEVVVYDVESTGTDTSQDRIIQIAAIRIDENGQVLEAFERFINPGIPVG QSKEVHGFSDAYLQEHGEDPATVLKAFKEFSKDAIIVGHNVNYDVTIFTNELARHNLGNP EFKAIYDTLDIYRRFYPNLPNHKLGFLASKFPIHHEPTHNAMDDILATAQLLIYAVKEKI VPTTTGRMVAINKYKAAFTDIASQMATLRRKAYTEMPTKLLAYIMNQMGVLEYYKSHGEA AKVEHIRDLYRIMEKLDAAYEGPAGLARLNQILQMAALTAGEPAQQVRNEDRIPIITIHQ AKGSEFDHVFLAGLNEGIFPSPFAIAEGRGDEEKRLFYVGITRPKQELTITFEQTNIRGR AVQPSSLLNYMPRDPELVERRY >gi|292596540|gb|ADCV01000008.1| GENE 292 353803 - 354921 948 372 aa, chain + ## HITS:1 COG:CAC1266 KEGG:ns NR:ns ## COG: CAC1266 COG0564 # Protein_GI_number: 15894548 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 87 370 39 281 299 117 30.0 5e-26 MARKTHRPDDILWTVTAVDIEAVLSKKNARQKLIGNGQDISSKNRDISSSNQDISSRGSE HIGEVRDISLGEVLDTRYPRKSLVKLFEEKLIHINGHKATPKDAIYEGDEIWIAMAKEKI DHDPIEMDLRILYEDTDLLIVDKPSGVTVNSKDQVSLANGVAHYFKEHGIKRKVRFLNRL DRDTTGCIVIAKSGLAQSIYQQQMDDNTFEKWYMATVEGIVEADEDSLVFPMERSVDGIH YEVNPKGKETRTDFSVLCRHSSETVDNSVNKSKNSVDIAPKNVDINLGDVDKSNQNVDKT VYKSNKCGYSEVLVRLYTGKTHQIRVAFSHIGHPLVGDTLYGAQPTEQPFQLRAQKVVFT HMRTGERITVTA >gi|292596540|gb|ADCV01000008.1| GENE 293 354957 - 355079 56 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNIFKLIDFAELSTILISQLEYLMYCDFTMYSTNLLLTN >gi|292596540|gb|ADCV01000008.1| GENE 294 355182 - 356306 1318 374 aa, chain + ## HITS:1 COG:FN0948 KEGG:ns NR:ns ## COG: FN0948 COG0053 # Protein_GI_number: 19704283 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Fusobacterium nucleatum # 10 371 9 371 372 265 43.0 1e-70 MILQDNSAARNRGITLASIKGIIGNVVLVIFKMIVGLASNSIAIILDAVNNLTDVLSSVL TIVGTKLAAKGADKEHPFGHGRIEYMTTMAIAFIILGAGIGSLKESVDKIIHPEVSTFDI PGLVIIAVAIVVKVVMGRYIKAQGEKYKSDALVASGIDALFDAVITFATLVSAGLVFFFN FDIQGYVGAVISVLILKAAYDILREMYNHLLGVRADDNLIRNIKETIAQHPNVGGVYDLV LNSYGPGETIGSVHISVPDSMTMAEVHPLTKGIAVHLYKKFGINMTVGVYAENKPSVEVL EIRKALDQVISLYTHVVQVHAFYVQEEKKVIYYDIIFDFDEEDPHSTLEKIKAEMQKRYP DYTQFAIVDTDFSN >gi|292596540|gb|ADCV01000008.1| GENE 295 356514 - 357404 568 296 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1629 NR:ns ## KEGG: Vpar_1629 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 296 1 296 296 529 99.0 1e-149 MLQWIQKHYIVGFLLLLILILCALHLSGTRNEARILPKQGVIIEKDIAVDINRNPTAALK ILSASNYSESYTIDVLPILKQYNCYIVDYLIINEELYLLGCSNDTIPDMKLYPLLIFKIN DTSLVSNIIGYDLDKFSASLDYIDGKIIASNRDGEYIIDANLSASKIVDTDPRLVQQKKE SKHGIKNDKVILDSLIPRELYINGKVGDTYLLTVTPLIYAKPNMNLPFDFFKAEQYYGIP IYENMMLFWNVKTDEMERYENLKSITSFNIKYMDMNYDTKRFERWNQIINSVSPKN >gi|292596540|gb|ADCV01000008.1| GENE 296 357499 - 358071 516 190 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1628 NR:ns ## KEGG: Vpar_1628 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 190 1 190 190 342 98.0 3e-93 MKKIALTALAVMAVVGMFAVQPADAKKVEQDPVVAPIDMPMNDEIQQVNGVSKSTNKETR RLSNNLAEATKVMIKKNWKTIYIKAVPTGDKDAVRFYYKDNRGQVYNGQVIRNTGLSKGK YMAGSLHQTEALQELVNHLQQNDQEVPSSIDIIITQEGYRIKTIFNYNEDTSNLPAYLQQ YEQQNFPSMK >gi|292596540|gb|ADCV01000008.1| GENE 297 358105 - 359547 1124 480 aa, chain - ## HITS:1 COG:CAC1472 KEGG:ns NR:ns ## COG: CAC1472 COG1113 # Protein_GI_number: 15894751 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Clostridium acetobutylicum # 2 442 6 446 455 619 73.0 1e-177 MSDTHQLKRGLKNRHVQLLAIGGAIGTGLFLGSGRAIHLAGPSIIFAYLITGVICFFIMR ALGELLLSNLNHHSFIDFVEDYLGDRAAFITGWTYWFCWLSLAMADLTAVGLYMQYWIPW LPQWIPALLVLIVLLLMNLTAVKHFGEMEFWFALIKVIAIISLIIIGIIMIVTGFTTDAG VAAFSNMWNYGGWFPNGTMGFILSFQMVVFAFTGIELVGLTAGETEDPEKVIPMAINNIP LRIILFYVGSLAIIMSIYPWTAVNPAASPFVAVFTAVGITAAAGIVNFVVLTSAASATNS GIFSTGRMIYALAKRGHAPSSMRRLTHSSVPYQATIFSAAVLLITVVLNYVMPEAVFVMI TSISTFCFIFIWAMMVICHLKYRKKNPDVVAQSKFKMPLYPVMNYVILAFFVFVLAILAL NEDTRIALLFTPIWFIILWAFYSMLNTDDEDALGEELIEMAGVKELYKKPKKDDSDDYVI >gi|292596540|gb|ADCV01000008.1| GENE 298 359841 - 360248 392 135 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1626 NR:ns ## KEGG: Vpar_1626 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 135 1 135 135 266 99.0 3e-70 MEFSFSLKIKATKEAVWAYYANIEKWYDWEEDLKNITLNGKFETGSCGTMELEGMPPMEY QLTLVKPFEEFWDKTETPFGAILFGHQIIDNHDGSVNVKHTVSLESEDKQHLEFLSQVFS DVPQSIFILKNCLER >gi|292596540|gb|ADCV01000008.1| GENE 299 360315 - 360704 272 129 aa, chain + ## HITS:1 COG:BS_ydcH KEGG:ns NR:ns ## COG: BS_ydcH COG1846 # Protein_GI_number: 16077544 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 7 116 25 134 147 82 38.0 2e-16 MRVYNKWHFTIKQALKELNLTHPQFVVLASLAYLSQHDNEVTQVMISKLSGIDVMTVSQI LSLLEKRGFVERKEHSRDTRAKAVLLNKEGGAILQKAVPLVEQIDEVFFGKLKSDEAQFK HLLGRLHEE >gi|292596540|gb|ADCV01000008.1| GENE 300 360740 - 361252 451 170 aa, chain + ## HITS:1 COG:L16252 KEGG:ns NR:ns ## COG: L16252 COG3467 # Protein_GI_number: 15673938 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Lactococcus lactis # 1 161 3 165 167 109 39.0 2e-24 MRRQDRMVTNIDEIKGILNSTRIIHLGMMDGDYPYVVPLHFGYEIVDDILYIYVHGYHEG KKFNLIKVNPHVFIEIDGNDEALVSGGDIPCKYSSVYSSVMGRGEATYLERVDEKAHGLQ VLMKHQTGREFPFTDAMVNSVGVVQIKVVDYTAKRRRQLEQDIIMPPLTK >gi|292596540|gb|ADCV01000008.1| GENE 301 361491 - 362252 658 253 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1623 NR:ns ## KEGG: Vpar_1623 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 253 1 256 256 472 95.0 1e-132 MKKLIYKSVLAAMAVGLLCAGYVSADVVNDSISTDNVGVSAAVTFDMPRVHPDSAIKALP RKTLLEWPMKTQEGARNWKGIVEAAQQLPYEVKAPSYIPYGYQFYTARQDQNDVLEVVYY KKGVTIYRDGKKYIDSIMAYRMGYSLDTVRDTPYVPSEYGDLEWSKSGDSSGVYYTGNPK THMVRSISWTKDGMAYSLFFLERVKEADAEFYKEHVVPLKSIDSSRYELVGNYPTTPKTI EEIKEEHVVPMKA >gi|292596540|gb|ADCV01000008.1| GENE 302 362384 - 363691 1057 435 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1622 NR:ns ## KEGG: Vpar_1622 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 434 1 434 435 779 90.0 0 MRLKTTKSLLAMGILAAVVSSFGVQPISALSPLVDENGNTVTIDTVEKNKELMNRYRWYD QVDNGDIVQLNVDAITNYFGYDLQIPSYMPEDYAVRDVKSRDHDVLEIVYTETGHNGEYG QKLTFSNTDIVYRMGWAIDTVVKPILEKTKYNADDAVNFTTPNGIPVHTLGSSNDSVQIA YWEKDNKVHMLYFASSRNQNYVSKIVDSVGPLSNVVSDDTRLRGDRNDKQNVKRNNVQSV KQNGEQDRPHFETIGLPLRTHTNSEWPILTSKPIGLPSGVIDASRKMSYDVSVPSYLPLG YTYYATHFYDNDVLETVYWKEGQEYQERSGRWVNHTMVFRMSYSTDTVWPKEYVPTEYHD VQWTDSTPTGNVQYTGDVDKGLVRSVAWSKDNMAYFLFFQVPVKASEAEFYKDHVVPLKD IDPSRTDLIGVKTIG >gi|292596540|gb|ADCV01000008.1| GENE 303 363929 - 365296 1987 455 aa, chain - ## HITS:1 COG:MJ0326 KEGG:ns NR:ns ## COG: MJ0326 COG2252 # Protein_GI_number: 15668500 # Func_class: R General function prediction only # Function: Permeases # Organism: Methanococcus jannaschii # 2 455 6 434 436 342 47.0 7e-94 MLDKLFQLSERGTTVKTEILAGITTFITMAYILFLAPNILSLAGMDKDAVLIATALGGGL VTIAMGLFVNYPIALAPGVGLLAFYSFTVVLGMGVSWQTALGAVFISGLVFLVLTLTSVR QMIVEGIPASMKIAITVGIGLFIAIIGLKLSGLMAISISLSPNSLGQVVQTHGNLIPPAS ETLLTLGNLHSGETLLALFCLIFTALLMARKVQGSLLIGVLVTTVISYATGLSTMPENFT VLAVPDFSKAAFLQLDIPGALHMGLITIIFSFTFVELFDSMGTLIGTATEAKIADPKSGK FPGLGKAMTVDALGVSVGALLGTSTITAFVESAAGVGAGGRTGLTAVTTGVLFLICLFVA PLVTLVPNAATSPILIIVGALMLGAIRNIDFDDWTEGFPAFLVIVLMPFTYSIANGISAG LIAYPLLKIIAGRAKEVNWIMYVLAALVIIRYVFF >gi|292596540|gb|ADCV01000008.1| GENE 304 365443 - 365862 521 139 aa, chain + ## HITS:1 COG:DR2094 KEGG:ns NR:ns ## COG: DR2094 COG1959 # Protein_GI_number: 15807088 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Deinococcus radiodurans # 1 132 46 175 197 108 44.0 3e-24 MKISTKGRYALRILADIAEHGVEKNVPIREIAERQGFSDKYLEGIVSRLSSAGLVKSGRG KYGGYRLVKSPAEYNVYEILYAAEDSIALVSCLEDDVEPCPMFNDCLTAPLWQYLQDEFR HVMEHVSLQDVMDHKFPTE >gi|292596540|gb|ADCV01000008.1| GENE 305 366124 - 367368 1215 414 aa, chain + ## HITS:1 COG:lin2884 KEGG:ns NR:ns ## COG: lin2884 COG0477 # Protein_GI_number: 16801944 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 13 392 6 376 402 197 32.0 2e-50 MSTSVYDARGGMRNVWIITTSMTVLAICYTMIIPFLPIYLLELGVPKDDVALWSGLVFGI TFLIAGIMAPIWGKIADNKGKKRMALRAGFAIAVSYVLIGMVTDQYQLLMGRALVGFANG FYPAAMTMVSLSVDEKQVGRALGIFQTGLILGNVVGPFLGGAVESVVGMRPVFYISGIAV FIATLAVLFLVKEPKLEVENTTSKEQSKQPVKATSLREDFKSVQEQPVLVRLLWIYFFMQ CVIMMLQPILALYVGDMQGTMEGAAIISGTILSIGGLAGSLTTNIWVRLGERRGYFRTIS YCMLGSGVVLLLQSLPVGIWWFGVLQVLIGSCIVGINPSLSAAVTLNTEPGFRGRMFGMT TTAQQFGSMVGPVFASIVSTYIGISYVFSITGLLLLYMGFQSRKLSVQHDKYSV >gi|292596540|gb|ADCV01000008.1| GENE 306 367680 - 368474 962 264 aa, chain + ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 2 247 4 248 252 197 43.0 2e-50 MVRIGHTVLGEKGTKICVPIVGTTMKEILDATAVACNTPCHIVELRIDYFERAHSIDAII ELLMLIKPQLKGRGLLFTWRTKGEGGERTISTQDYFTMLERLIPTGLVDAIDIELFFDQD RMLKTIEFAKIHGITIIMSNHDFHCTPSREVIVNRLIQMKEFLADVPKIAVMPHTTGDVL TLLEATAEVKALYPSDPIITMAMGELGAVTRTAGALFGNAMTFASAGKASAPGQIDVHAL KRILDTIDVDGVFDEQQHKRVKVH >gi|292596540|gb|ADCV01000008.1| GENE 307 368817 - 369422 651 201 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1616 NR:ns ## KEGG: Vpar_1616 # Name: not_defined # Def: RelB antitoxin # Organism: V.parvula # Pathway: not_defined # 1 201 1 201 201 346 97.0 3e-94 MKTVNLQVRINEDLKQEVSSILKAQGLSYTSMLDALFRQIIKERRIPFAIALPTAPIDET PTPSTLNNGTYEQPQTTLKASDYIGAYGTPREENQEISFDTIDKTGVLNIRINPKVKTLT TAILKEMGLTMSQTVTLVSKQIQFNKDIPPTILRPEWIDAINNDFWTEEDLTTRIQLGLN QAEKEIGEPAEKIFNELLEDL >gi|292596540|gb|ADCV01000008.1| GENE 308 369762 - 370997 1419 411 aa, chain - ## HITS:1 COG:FN0045 KEGG:ns NR:ns ## COG: FN0045 COG0169 # Protein_GI_number: 19703397 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Fusobacterium nucleatum # 27 224 18 214 249 127 35.0 4e-29 MKFGLLGRTLGHSFSPRIHNALGNTNYELFEREPSQLQEFFADQELQGINITFPYKVNAL EACDVVDPRAERIGCVNTMVRKDGKWHGYNTDYDGFVFTLEHAGINVSGKECIILGDGAS SATVHVALEDLGAKSITHLSRKTAPLYTDAPNYYETAQIIINCTPIGMYPHNPANLIDIM QFSKLEGVVDLIYNPRRTVLLLQAEMMDIPYCDGLPFLVAQGVEAANHFQGESFGTKEIE QILRDMRREKENIILIGMPGVGKTTVGRAIGKEMGRTWLDVDHELEKEIGNVSTYITEQG EATFREKEAEMIAKLGTQTGLVISTGGGCVTVPKNYAHLRQNGRIYQLTQPVEKLSTSGR VLSSGGIGRLRELEETRTPMYESFAQCIVEHNRNAPETVAAILEDFESNLL >gi|292596540|gb|ADCV01000008.1| GENE 309 371122 - 372261 1188 379 aa, chain - ## HITS:1 COG:VC0705_2 KEGG:ns NR:ns ## COG: VC0705_2 COG0077 # Protein_GI_number: 15640724 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Vibrio cholerae # 142 377 29 266 278 171 41.0 1e-42 MNLDEVRVKINDINDQMLALFKERMELSKDVAAAKKEMNKAIYDAKRERDILDKVTKDAG PDLDLYARRFFEALFSLSRTYQSEQLFQDNEFTLKMKKAIEQSPTLPPQRGSVACAGVFG SNAQMACDKLLPLSQIHYVTGFRSVFDAVESGECQFGVLPIENSSNGSVKEVYDLLEERK CYIVRGTRLWISHDLLVKKGTKLEDIHTIISHPQALGQCSHFLDKLEGVELRSYDNTARA AQLVAASDDPGVAAIAAPQCADLYNLSPLLRNIQNSDNNYTRFICISKDFHVYPGANKIS VVTTASHAPGGLGTLLTKFANIGVNLTKLESRPIVGHNFEFLFYLDLEASLADPKVLSVL AELHASQDKFRLLGNYPEN >gi|292596540|gb|ADCV01000008.1| GENE 310 372248 - 373342 1281 364 aa, chain - ## HITS:1 COG:CAC0896 KEGG:ns NR:ns ## COG: CAC0896 COG0082 # Protein_GI_number: 15894183 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Clostridium acetobutylicum # 1 356 1 356 356 315 43.0 7e-86 MASNFGKTIQVSTFGASHGYAIGGIVEGLPCGHTIDIDELQTFLKRRAPGQNQLQTQRKE ADIPEFLAGMVDGMLSGSPLAFMIRNTSQHSSDYNNLRDIPRPSHADFTARMRYGDKVDM RGGGHFSARLTAPLCVAGGIALQLLREKGIEIHGHLKQVGTIQDAPIDMVHPDMKALSEI ATEPIAMVDADKRSEVENLVMKLKKDGDSTGGIVEVVATGLPIGLGNPNFDGIENRLARV IFGVPAIKGVSFGGGFDMCSRLGSEVNDAFTMDGDTITTTTNNSGGIQGGITNGLPLIMQ VGIKPTPSIYKEQHSVSLSQKEDILLTIKGRHDPCVALRAVPVIEAVTALVILDFLGDID HELR >gi|292596540|gb|ADCV01000008.1| GENE 311 373332 - 374600 1472 422 aa, chain - ## HITS:1 COG:CAC0895 KEGG:ns NR:ns ## COG: CAC0895 COG0128 # Protein_GI_number: 15894182 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Clostridium acetobutylicum # 11 420 13 422 428 230 34.0 3e-60 MHSVTNAIPTGTIASIPAKAHAHRALICAALANSPSTILLSRTSKDIDATMDSLRGLGAQ VVYENKVVTVTPGPVPTKGNVVPHESGTTLRLLLPVAASICNEVDVDAKGRLPDRPLEPM LGEMKAHGVTFSQDKPPFTMTGRLQGGEFGMVGDVSSQFFSGLLLAAPQCGGATITSTTP LQSSDYVTLTTTTMANFGVTVDHTPASDTVQESFAVAANTTFKGQSNYQIEGDWSNTAIW MVAAGMTGKPITITGMNKNSVQADRRIMQIMIDTGCDVVWDGMNVTVMGRAVKPIHADLE QMPDMLPVMAALACSIHGESSFVKGARLRLKESDRLEAVANLVRDLGGTVREDGDDLYII GSGILKGGQGDCVNDHRLVMAGTLMALISENPVTLKDSEAITKSYPDFFEDWNLLGGNAN GI >gi|292596540|gb|ADCV01000008.1| GENE 312 374619 - 375671 1106 350 aa, chain - ## HITS:1 COG:slr2130 KEGG:ns NR:ns ## COG: slr2130 COG0337 # Protein_GI_number: 16330660 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Synechocystis # 10 345 12 355 361 252 42.0 6e-67 MTRIHINASTPYDVVIEKGALQRITDYIKPLKPNCRVIIVSDSNVAPHYLDSVKANMEHA GYAVCDYVFPAGESSKNAHQLIDLVEYMAGQSLTRKDLLIALGGGVVGDMAGFAAATYLR GIDYVQVPTSLLAAVDSSVGGKTAVNLEAGKNLWGAFKQPILVLCDPATLNTLPDMEWIN GCGEIIKYGFLDVPGLLTQLEHKPLIKHHDSVSTVIARCVQAKADIVEQDERESGVRALL NLGHTFGHGIEKASHFEVHHGYAVAIGMVLMAQGAVKHGELDVESLDKLKALIKAHDLPT TTTISKEEILAAAKHDKKSEGATIKIVVPTSYGHSELKVVTHDELATYLD >gi|292596540|gb|ADCV01000008.1| GENE 313 375746 - 376759 1356 337 aa, chain - ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 330 1 331 337 390 59.0 1e-108 MIITLKQNAAAEEVSRLRGELEAQGFVIHPVEGTRYNILGLIGDTASLDARQIESLDFVD KVTRIQEPYKKANRKFHPDDSIINVGGVLIGGGHFAVMAGPCSVETPEQVLATAKACKEA GATILRGGAFKPRTSPYSFQGMGPEGLELLELAKKETGLPIVSEVMDISQLQYFDNVDML QIGARNMQNFTLLKEVGKLNKPVLLKRGLSATYEEWLMAAEYIMSEGNEQVVLCERGIRT FETKTRNTLDVTAIPMMHELSHLPIIMDPSHAAGMSRMVRPLSLASVGGGADGLMIEVHN DPAKALCDGPQALRPDQFTSLMKEINALRQALVECTK >gi|292596540|gb|ADCV01000008.1| GENE 314 376891 - 376980 160 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNQISLTAKQYFYWFFIQRTGKELFVMR >gi|292596540|gb|ADCV01000008.1| GENE 315 377233 - 377649 425 138 aa, chain + ## HITS:1 COG:RSc1774 KEGG:ns NR:ns ## COG: RSc1774 COG0454 # Protein_GI_number: 17546493 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Ralstonia solanacearum # 7 138 19 148 148 84 37.0 7e-17 MIIQILDHITEEIKQIRVDVFMKEQGFEDEFDEIDETAKFVLLSIDGKAAGTCRYFPSDT AGDAHIGRMAVRKLYRGQHLGTKIMMAAENAIRRDGFKTCSLSAQVQAKPFYESLGYRAE GEEYLDEGCPHVMMRKVL >gi|292596540|gb|ADCV01000008.1| GENE 316 377750 - 378208 606 152 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1608 NR:ns ## KEGG: Vpar_1608 # Name: not_defined # Def: septicolysin # Organism: V.parvula # Pathway: not_defined # 1 152 1 152 152 255 100.0 4e-67 MKLAEALQERSDLNYKISDLELRLTQNSLVQEGEVPNENPEELLKTLEQCVNRLQKLIAD INLTNCKTIIEGRTITEIIAEKDCAALRLTAYRTLASSAGSINFRARGSEIKLMPTVNVA DIQKEADHIAKQVRLLDNLLQSANWTTELIES >gi|292596540|gb|ADCV01000008.1| GENE 317 378589 - 379617 1277 342 aa, chain - ## HITS:1 COG:CAC3276 KEGG:ns NR:ns ## COG: CAC3276 COG0208 # Protein_GI_number: 15896521 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Clostridium acetobutylicum # 1 341 3 344 344 361 53.0 1e-99 MDKKLIFNENGDRGTQSMIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV KQFPYLTDYERRAFDKIIAFLNFLDSIQSENLPNLSRYITASEVASLLNIQAFQEEIHAQ SYSYILDTVTNPITRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYI LEGIYFYSGFSFFYTLARQGKMTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTP ELEAKITDMIRQGTENEIAWGQYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPE IKDNPMEWIESFSNLNSTKTDFFEAKVTNYTKAAAFDFDDLE >gi|292596540|gb|ADCV01000008.1| GENE 318 379817 - 382099 2334 760 aa, chain - ## HITS:1 COG:CAC3277 KEGG:ns NR:ns ## COG: CAC3277 COG0209 # Protein_GI_number: 15896522 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Clostridium acetobutylicum # 49 760 37 743 743 742 50.0 0 MEIMIKKRDGHFEPLSVEKTKRMIAFACLGLDSCDPLELEMDAKLQFVDGMTTKEIQKTL VQTAIEKVISKKDDGFGNQVNKMNQDWQFVAARLFLFDLYKEAAITRRYKAFGYGNFPNL VNMLVKEKKYADFFVTEYTADELQELGDYIKPKRDYLFNYEGLKLLADRYLVKGFNKEIF ELPQERFMAIAMHLALVEGENKVEYAKKFYDLMSQLKMTTATPTLANAGTPFHQLSSCFI SGVDDNLWSIYDVNSKFSRVSKHGGALGIYLGKVRALNSDIRGFKNSSGGVIPWIRLYND TAVAVDQLGKRKGGATVTLDIWHKDFYEFVELRTNNGDDRRKAHDIFPAISVPNIFMERM LARENFTLFDPHEILAVKGYSLEDYYDTDDNKEFTKRYLECEQDPNLHGIEVPALDMMKK IMRSAVETGTPFIFFRDTVNAANPNKHAGMIYASNLCHEIAQNVGFTNLAEEIINEDGTI TTKTNTGDMVTCNLNSISLGRITDEELEENIALQIRMLDNVISINQAPVPESRMTSDKYR AIGLGTSGYHHYLVNHDIQWESDEHIEVADKLFENIAFYAIKASMELAKEKGAYPAFKGS EWETGEYFTRRGYTSDRWKQLAADVAKYGIRNGYLMAVAPTGSTSNIANTTAGIDPIFKK FFIEEKKGSFTPKTAPDLNDKTFWLYKEAHTIDQQWSIKACGVRQRHIDQAQSFNLYITP QMKAKEILDLYVEAYKQGIKTIYYIRNQSLEMDECTSCSS >gi|292596540|gb|ADCV01000008.1| GENE 319 382382 - 383941 961 519 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1605 NR:ns ## KEGG: Vpar_1605 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 519 1 519 519 903 94.0 0 MKSAIKHLWSSLRDLATQSPILLVLIAVFSCTPLYIEQDWFSDIDLGLYTLYFFIVILET YIMRDRKFSIIYTLLSIGISVGLYTIHETYHHIRGIELATENISYLWLYSMIALYFTSPG EHYIGEIINRIKRIGITIVTSTLYNIVIVMTLWFFFIILDKPFTFEDLIFKALAAINIFI CMSMLCTYKEELDGPPEPNTFYNVVFGIILPKASIITGILANIYLVLILLGLREDARFLY TYYPYVAIFYLFYLASFRSSESSKTQKILCFLFITITILCLILIGKRVINEPVLWLNTIY VAAFNLIFLAHNVYSFVKRLTPSIHTTIMALALGAVLLMPFIGYTSHREFTNYTKIDGQW HVYLPITETFNPDFTDYGRTIIQGDSSKLGATEIYKERNIQFISFTAVEEPHVISLVGYN KFISNIELEVREPTDSTADIPTASYESINFRFINEGLDLEVSLPNGVTEVHHIYEKFLTV PKTASDSVIIEGTGYKLLIHSYYAYQDSARRIIFSVLYN >gi|292596540|gb|ADCV01000008.1| GENE 320 384089 - 385261 1443 390 aa, chain + ## HITS:1 COG:aq_1145 KEGG:ns NR:ns ## COG: aq_1145 COG1454 # Protein_GI_number: 15606402 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Aquifex aeolicus # 6 390 7 383 387 221 33.0 2e-57 MEFSYFLPVHIQFGWDKVDRVADFVKPYGKKALIVTGRTSAKKSGLYDRVTAKLDAAHIE HVLFDQVDANPLTTIALDGAALAKSESCDMVIAIGGGSIMDCAKGIAFMAVNDGDINDYI FNRKTSDKALPLIVIPTTCGTGSEGNGFGVLTNPETGDKKSLRCNAIVPKVSIVDPAVMG TMPPHVLASVGFDALCHNIEAYTSRTAQPFTDALSHYAVTLLAQYLVPLYKHVKAKAESK SAVFNETQLTKAWESVTLASTIGGMVINTAGVTLAHGMEHPASGLKDITHGVGLAVIEPI VVEYTWSANPDKFATLARIFNHGDGSELGEALRLIVHELDLTTNLTELGFTKKDIPWLVD NVYVVATGNIANTVADVSQEDIEMLYKKMF >gi|292596540|gb|ADCV01000008.1| GENE 321 385286 - 386116 541 276 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794444|ref|ZP_06759580.1| ## NR: gi|294794444|ref|ZP_06759580.1| hypothetical protein HMPREF0873_01044 [Veillonella sp. 3_1_44] # 1 276 1 276 276 568 100.0 1e-160 MFQEFYGLLTVMLCVLFAIVVALFNIAPITYMVFGIAIVLSVLLQYGRFKKRTISEKAHS RLACGLFIVITLSISWLVADWIQYDTQTTRDQTDGFEFSTMDWKRGWPNSEELPEGLKRP EKLPEGIYRASAFRSDLVWANAYRERYTVLEGDLKVISQYEAIAKQNAAYTAQIDADGVL RDLDTGEKKRFISHPNSYNIIESIGEEPLNLPQRNFIEWLRFAPRKETKTVVKDTYNSTR NHRLYVFVDDGNTKRPHFVELLISNDGTRAVFYQSK >gi|292596540|gb|ADCV01000008.1| GENE 322 386147 - 387013 211 288 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794445|ref|ZP_06759581.1| ## NR: gi|294794445|ref|ZP_06759581.1| hypothetical protein HMPREF0873_01045 [Veillonella sp. 3_1_44] # 1 288 8 295 295 568 100.0 1e-160 MRQCLMYLKNLFTEPPYRKSIWFFIILWILTFLFSDEISYSGLYYLILLVATIVLLLEKC GVIDSEKAIRKRFLTYFYVIFFLCMLPTLAVNLAFSAIGVSHYDTKQWHSTWPSSKAGYI PAPLQTPKSLPESLKVVSSAEVIGLGGSYSCLVLDGDKATISQYEETVKSHAWYSFVNGR KNDSTFKALNSFTYPKDRNLLVSDVNEYYEIITVQRQNWKLFPWVIDGTQSVGDDPKEDY YYSTRISAEKYIVYVVYHNFDHDQPRVIYFMFNPEQTRMITVDIDMYH >gi|292596540|gb|ADCV01000008.1| GENE 323 387210 - 388529 1663 439 aa, chain + ## HITS:1 COG:CPn0289 KEGG:ns NR:ns ## COG: CPn0289 COG1301 # Protein_GI_number: 15618209 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Chlamydophila pneumoniae CWL029 # 57 418 40 395 395 250 40.0 5e-66 MADQNNKNVDALAQEITLKSRGQGKLRQFILWMGALIIGAILGWQHIPALNELFNFIAAV FTRLFQFIAIPTVSLAVITTLSMLGAKKDTGRIFGHAVVYTLLTTICAGAVGLGLFLWIA PGNLPLDVIGAGAAQVPEKLGNVTYYDHFLSVIPNNILQPYLQANVLSVMFISASVGLAF AFMPRTENREAVLKVLFGLQELLFTLIKALLYVLPIGILAFAGQLSAQIEAGVIVGALGK YTAVVIGGNLIQFFIVIPLFLLFRGLNPVDVFRKMSPAVAVALFTKSSAATLPVTLASAE DNLKAHPAVARFVLPICTTINMNGCAAFILVTSLFVMQNAGMELTMGTMVAWLFIAVLAA IGNAGVPMGCYFLTLSLMSSIGAPIGLLGIILPIYTIIDMIETAENVWSDASVCAMVDHD LQGKLDDSSGDDMPQFQGA Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:07:32 2011 Seq name: gi|292596539|gb|ADCV01000009.1| Veillonella sp. 3_1_44 cont1.9, whole genome shotgun sequence Length of sequence - 64685 bp Number of predicted genes - 49, with homology - 49 Number of transcription units - 25, operones - 12 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 107 - 166 8.5 1 1 Op 1 . + CDS 227 - 1264 773 ## COG2038 NaMN:DMB phosphoribosyltransferase 2 1 Op 2 . + CDS 1274 - 2587 614 ## COG1808 Predicted membrane protein + Prom 2835 - 2894 8.3 3 2 Tu 1 . + CDS 2959 - 3792 1119 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 3881 - 3933 9.3 + Prom 4164 - 4223 8.4 4 3 Tu 1 . + CDS 4307 - 8563 4823 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 5 4 Tu 1 . - CDS 9275 - 10462 1348 ## COG0477 Permeases of the major facilitator superfamily - Prom 10628 - 10687 7.6 - Term 10799 - 10833 4.5 6 5 Tu 1 . - CDS 10852 - 12489 1989 ## COG1620 L-lactate permease - Prom 12615 - 12674 6.6 - Term 12693 - 12738 12.6 7 6 Tu 1 . - CDS 12785 - 13924 1692 ## COG2055 Malate/L-lactate dehydrogenases - Prom 14030 - 14089 4.6 + Prom 14423 - 14482 8.8 8 7 Op 1 . + CDS 14505 - 16508 2013 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing + Prom 16620 - 16679 8.1 9 7 Op 2 . + CDS 16713 - 18044 1681 ## COG1114 Branched-chain amino acid permeases + Term 18049 - 18106 14.8 + Prom 18096 - 18155 8.1 10 8 Op 1 . + CDS 18194 - 19267 1267 ## COG0371 Glycerol dehydrogenase and related enzymes 11 8 Op 2 . + CDS 19312 - 19548 312 ## COG4728 Uncharacterized protein conserved in bacteria 12 8 Op 3 . + CDS 19557 - 20333 952 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 20389 - 20428 -0.6 + Prom 20374 - 20433 4.6 13 9 Tu 1 . + CDS 20470 - 21378 1206 ## Vpar_1589 hypothetical protein + Term 21408 - 21455 6.2 + Prom 21401 - 21460 10.8 14 10 Op 1 . + CDS 21591 - 22232 753 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 15 10 Op 2 . + CDS 22210 - 22608 304 ## COG2827 Predicted endonuclease containing a URI domain 16 10 Op 3 4/0.000 + CDS 22660 - 23118 583 ## COG4506 Uncharacterized protein conserved in bacteria 17 10 Op 4 . + CDS 23084 - 24817 2380 ## COG0018 Arginyl-tRNA synthetase 18 10 Op 5 . + CDS 24833 - 26443 1996 ## COG0504 CTP synthase (UTP-ammonia lyase) 19 10 Op 6 . + CDS 26453 - 26668 295 ## Vpar_1583 hypothetical protein + Term 26674 - 26726 -0.6 + Prom 26717 - 26776 7.5 20 10 Op 7 . + CDS 26858 - 27421 1018 ## COG0450 Peroxiredoxin + Term 27579 - 27637 16.0 + Prom 27748 - 27807 9.5 21 11 Op 1 2/0.000 + CDS 27915 - 28364 611 ## COG1959 Predicted transcriptional regulator 22 11 Op 2 . + CDS 28380 - 29315 813 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Term 29369 - 29409 12.2 - Term 29530 - 29560 2.0 23 12 Tu 1 . - CDS 29591 - 32995 4846 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 33129 - 33188 13.2 - Term 33376 - 33428 4.1 24 13 Op 1 19/0.000 - CDS 33438 - 35432 2858 ## COG1299 Phosphotransferase system, fructose-specific IIC component 25 13 Op 2 . - CDS 35466 - 36380 1076 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 26 13 Op 3 . - CDS 36409 - 37722 1090 ## COG1757 Na+/H+ antiporter 27 13 Op 4 . - CDS 37808 - 38641 997 ## COG0253 Diaminopimelate epimerase - Prom 38720 - 38779 7.6 28 14 Op 1 25/0.000 + CDS 38960 - 40687 2243 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Prom 40716 - 40775 5.0 29 14 Op 2 . + CDS 40824 - 41084 485 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 41313 - 41346 0.7 30 15 Tu 1 . - CDS 41178 - 41456 405 ## COG1937 Uncharacterized protein conserved in bacteria - Prom 41487 - 41546 8.8 + Prom 41526 - 41585 8.4 31 16 Tu 1 . + CDS 41788 - 42594 743 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) + Term 42611 - 42664 12.1 + Prom 42625 - 42684 5.4 32 17 Tu 1 . + CDS 42718 - 43419 542 ## Vpar_1570 hypothetical protein + Term 43580 - 43642 0.6 + Prom 43580 - 43639 11.2 33 18 Op 1 16/0.000 + CDS 43754 - 44965 1507 ## COG0137 Argininosuccinate synthase 34 18 Op 2 . + CDS 44965 - 46392 1617 ## COG0165 Argininosuccinate lyase + Prom 46791 - 46850 7.4 35 19 Tu 1 . + CDS 46982 - 48313 1594 ## COG0531 Amino acid transporters + Term 48336 - 48372 7.5 + Prom 48944 - 49003 5.1 36 20 Op 1 49/0.000 + CDS 49048 - 49986 261 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 37 20 Op 2 5/0.000 + CDS 49986 - 50807 1090 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components + Prom 50809 - 50868 3.2 38 20 Op 3 5/0.000 + CDS 50961 - 52529 2000 ## COG0747 ABC-type dipeptide transport system, periplasmic component 39 20 Op 4 44/0.000 + CDS 52542 - 53339 441 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 40 20 Op 5 7/0.000 + CDS 53332 - 54147 530 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 54225 - 54265 7.2 + Prom 54398 - 54457 5.5 41 20 Op 6 . + CDS 54534 - 56087 1653 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Term 56109 - 56155 9.2 - Term 56100 - 56137 3.0 42 21 Tu 1 . - CDS 56155 - 57084 950 ## Vpar_1558 hypothetical protein - Prom 57157 - 57216 10.0 + Prom 57250 - 57309 8.1 43 22 Op 1 3/0.000 + CDS 57399 - 60302 2118 ## COG1061 DNA or RNA helicases of superfamily II 44 22 Op 2 . + CDS 60311 - 60715 489 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 60734 - 60777 7.4 + Prom 60759 - 60818 8.0 45 23 Op 1 . + CDS 60902 - 61720 958 ## COG2897 Rhodanese-related sulfurtransferase 46 23 Op 2 . + CDS 61734 - 61961 285 ## Vpar_1554 hypothetical protein + Prom 61967 - 62026 6.0 47 24 Op 1 . + CDS 62099 - 62854 766 ## COG0708 Exonuclease III + Term 62880 - 62909 1.4 48 24 Op 2 . + CDS 62923 - 63612 612 ## COG0603 Predicted PP-loop superfamily ATPase + Term 63639 - 63668 2.5 + Prom 63996 - 64055 6.4 49 25 Tu 1 . + CDS 64084 - 64575 747 ## Vpar_1551 protein of unknown function DUF988 + Term 64629 - 64680 16.1 Predicted protein(s) >gi|292596539|gb|ADCV01000009.1| GENE 1 227 - 1264 773 345 aa, chain + ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 339 13 340 352 168 33.0 1e-41 MKDKSVLPIEKQLNKFLQPKCLIPGGLGLWEIYFRKICAAWGEINGEIRPQHIIFSADNG CNMEGYVGYNYEVTQKQSCNMLLGRSSATQFCNFNNIPYEVVDVGIASDDGIGVNRKVAK GSKNILNHPAMTEDEFNRAFQAGYERVEHYVAKGINLFSFGEMGLGNTTTSACVLSALTG ADPTETVGPGSWPDKPDLMKRKVDFVRSVLDKHKASIDSESEPDRVREIVAHVGGFDIAA ILGAMLACVDFEKPFVIDGFITSVAAACATHINARIKDYALPSHYSKEKGTEIALAEVGI TQDMVPIQAQMSMGEGTGAILMVQMLKTTQHMFVNVGTFAELMKL >gi|292596539|gb|ADCV01000009.1| GENE 2 1274 - 2587 614 437 aa, chain + ## HITS:1 COG:SP1264 KEGG:ns NR:ns ## COG: SP1264 COG1808 # Protein_GI_number: 15901124 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 34 301 27 291 347 199 39.0 1e-50 MEINKYFDIHFERADDATIAKRLIGGAKIKGPALVILILSMFIASIGLNMNSTAVIIGAM LISPLMGPILATGFGFATLNFTVVKSAILRLSLQITIAVLASTLYFYISPVQTVTSELLA RTEPNIFDVFIAIFGGLAGIIGQTRKTLDNVIPGVAIATALMPPLCTAGYGLANGNWHYF FGAGYLFFINAFFIFFASFIVLKGVYSLPSHKQAEEINRRNQLIFLVIGLIMAIPSIYAG YDMTIKYSESNHIEQFIKTNINQDGRRLVIDYSLDRVNKLVDIVVVGAPVTSEERSQLDD KLQKDEYLQSYAVRFVNSVDEKKSAVDKTSLNKASEDHEKYTNLSNLYQPTYQLVSETIN TMKTTEAEAKALFPFVSRVEGMPLIDNLEQPKANRYMVIIHTASTVSDADSERIKAWLEA KLSAPVTISVEQTTSTL >gi|292596539|gb|ADCV01000009.1| GENE 3 2959 - 3792 1119 277 aa, chain + ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 35 277 18 260 260 266 58.0 3e-71 MKKWLALAATAVLGASLLISGCGSSTNDASSSSAGSSKAEVLKVAANPVPHAEILNQIKP LLAKEGVDLQIIEFTDYIQPNMALSSHEVDANFFANVPYQNNFNKDHGTNFVSFAPVHIE PLAIYSQKIKDLKDLPNGAKVAIPSDPTNSARALLLLQSAGLVTLKDPTGLTNTPFDVTS NPKNIQITELEAAQIPRSIQDLDAAVINANYALPAGLNPTKDGLFVEKADSPYANLLSVN PGDENKPAIQKLAKALQSPEVKKFIEDHYKGAIIPAF >gi|292596539|gb|ADCV01000009.1| GENE 4 4307 - 8563 4823 1418 aa, chain + ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 1 663 1 660 663 776 56.0 0 MQHMLRMGIDVGSTTVKVVLLDEHDNYLYKKYIRHYANILDTVYTLLQEAQVGHEDALVH VCITGSGGMAMAEKVRIPFVQEVIAETRAVKALYPETDVIIELGGEDAKVTYLGQTAEHR MNGSCAGGTGAFIDQMATLLQTDASGLNQLAMNADTIYPIAARCGVFAKTDVQALLNQGA SHENIAKSVFQAIVNQTIAGLACGHKIEGNVAFLGGPLTFLSELRQCFCDTLELDEAHRI IPENGELFIALGAALMKDECREITVGQLTKEIGALIGIPMEATDRVDPLFKNEQELEEFR ARHAKAVTPKANIEDAQGPCYLGIDAGSTTLKVVLINSNKEIIFSHYGPNHGKPLEKSRE IIEQIYTLLPKGAYIAHSGVTGYGEAFLKRALGIDIGEVETMAHYRAARFFCPDVSFILD IGGQDMKCCKVRDGYIEDIVLNEACSSGCGSFIDTFASGLRIPIDQFAKEGLLAPMPIDL GSRCTVFMNSKVKQAQKEGATVQDIAAGLAYSVIKNALYKVLKVKDPKELGDHIVVQGGT FYNESVLRAFEKLMGVEVIRPDVSGLMGAYGMALLAAETAEELQKGESTLLDSEGLNSLQ VSTTMRNCGLCPNNCMLTINAFSDGRTYVTGNRCDRGAGDMIQEKRKPVPNLVDVKLRRY FDYYLKKNIPEFEGKMRVGIPRVLNMYEDFPFWFTFFNSLGYEVILSDYTTKDQYNKAID TIPSDTACYPAKAVHGHIRDLANAQVDFIWYPCIQHGPKEFSRDNNYHCPMVISYPELIK NNMQEVLGDTPFHAPFLPLADKKSLVPALVKALDFLGLKKKDIAKAVDLAWEEQENCKAS YRETTKKTVSRLVAEQIPTIVLAGRPYHLDSGINHGIPELITSLGMAVLTEDGVAPLGNE IKHLRVVDQWSYHSRLYRAAEFVSRTEGFQIVELNSFGCGLDSIVADQVKDILSANHKIH TLLKIDEGTNLGAVTIRLRSLQSVMERSLRRHHNPEAPEEIVVEKLPTYDYNRVVFTEEM RKTYKILVPQMSPLHFSLLELVLQHEGYNFEMLPAPTRDDIEVGLKYINNDACYPAIIVV GQLMSALLSGKYDVDKTAVIISQTGGGCRATNYIGYLRKALIDAGMKQVPILSLNASDME RQPGFKLTKGFLHRMIQAVVYGDALMQCVLATRPYETNPGSTDALCDYWIKKLRDNITSA SLRQYNKYIKEIIHDFDNLPINKDVQKPRVGVVGEIYVKFHPSANNHINELIEKEGGEVV TSGLLDFFLYCAMDSTYRAKHLDGTWLSGFFGTLAREALELYRLPYAKAVAASKHFDPLQ RMTEVAKEAAQFIGLGNQCGEGWFLTGDMIDLIEKGAKQIVCLQPFGCLPNHVTGKGMVK TLSAAYPDVRIAAIDYDPGSSAVNQANRLKLLLSTMFE >gi|292596539|gb|ADCV01000009.1| GENE 5 9275 - 10462 1348 395 aa, chain - ## HITS:1 COG:BS_ydgK KEGG:ns NR:ns ## COG: BS_ydgK COG0477 # Protein_GI_number: 16077635 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 1 394 1 396 402 241 39.0 2e-63 MTQENSAKVSFILVVFLGLLTAITPLATDLYLPALPIMPSELNTSASNIQMTIGVMTFGV ALGQLFGGPISDTMGRKLPLITGNLLCVISSIICAYAPSIEILLLGRFLQGLTGSVGVVI AKAIARDFAFGQELTKLFALLMMVNGLAPVIAPLIGGQLLLFTTWRVIFVILAIFSAILL AGSLLFRESLPKEKRVTGGVATATKNYITLIKDKRFLGQTLIQFFAFGGFFAYISGSSFV YQNIFQLSAQEFSYLFGINSCGIILASAISARLSNVITVRQLLTFALWQLTIGSLLFLIA MLFEWPLIPVTAILFFTVCTVSLFGSASFSMAMAKYGKMAGSASAVLGFASMFSAGIVSP LVGIGGEYTGIPMGTTMLVCSALSLLCLYGLVEKD >gi|292596539|gb|ADCV01000009.1| GENE 6 10852 - 12489 1989 545 aa, chain - ## HITS:1 COG:BB0604 KEGG:ns NR:ns ## COG: BB0604 COG1620 # Protein_GI_number: 15594949 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Borrelia burgdorferi # 1 481 1 470 500 294 41.0 4e-79 MSAITVLLALSPIIWLIVALSILKLPAWQATSVAAIGSFIIAITAFQADPFIMVTGALEG AALAIWPILLVITAAIFVYNLVVHTKAMETIKTMLSSVTSDTRVLALLLAWGFGAFMEGM AGFGTAVAIPAAMMVAVGFDPLKSIIACLVANSVPTTFGSIGIPTTTLASLTNLDPSHLG TFISVQLFLLNLIAPFFVVMIIGGGIKALKGVFLVTLLSGLALAVPETVINAVMGPELSV ISASIVIMAVIIGCAKIMPPNDPKYAVKQTGEVPKVSGGEGLVAAMPFILIFVLLLLTSK LFPAINGPLASIKTSVPIYQGAGAKPYTFVWIATPGIMIFIAGIVGGFIQKAKAGEIFGT LGSTVKNLKFTYLTIITVVMTAKLMTYSGMTADIAKAMVAGTGTLYPLFAPIVGALGAFL TGSGTNSNVLFGPLQIAAAQGLDPTNFEDLGFWLAAVNSGAAGIGKMLSPQSIAISIGAV GPALKAYLENHKEISAEEAHKLEHEIEASVIMNSAFKYFIVFIVMHGCISFFGQHFIHEI HHFFF >gi|292596539|gb|ADCV01000009.1| GENE 7 12785 - 13924 1692 379 aa, chain - ## HITS:1 COG:CAC0566 KEGG:ns NR:ns ## COG: CAC0566 COG2055 # Protein_GI_number: 15893856 # Func_class: C Energy production and conversion # Function: Malate/L-lactate dehydrogenases # Organism: Clostridium acetobutylicum # 10 366 13 369 369 342 46.0 5e-94 MADAKNTVLFPYETLKKLSMDAFQKFGFSEKEADIIQDVLLTSDLFGIQSHGMQRMVRYH KGITNGLIKIDAKPEIVKETPISAVIDGHDGMGQLLGHKAMEMAIEKAKKSGVGIVSVRN SNHYGIAGYYAKMASDQGLIGFSCTNSEAIMVPTYARKAMLGSNPIAWTVPADPVDFFFD CSTTVVTRGKLEMYNKMGKATPDGWAVNKDGVPSTDAAEVLGNISRHEGGGILPLGGATE VLGGHKGYGNGMIAELFSSILSQGGTSNKCMVGGKSNICHGFMAINPEFFGDPAEIKKHF SQFLQELREAPKAQGQDRIYTHGEKEHESVEKVKAEGIPVLNGTMLEVQDLCNELGLDFK SYFGDYVPEAPATMFKGNY >gi|292596539|gb|ADCV01000009.1| GENE 8 14505 - 16508 2013 667 aa, chain + ## HITS:1 COG:RSc2859 KEGG:ns NR:ns ## COG: RSc2859 COG0243 # Protein_GI_number: 17547578 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Ralstonia solanacearum # 5 663 7 691 698 419 35.0 1e-116 MKEYKSVCPYDCPDACGLIVSVDNNKVISVRGDRAHAFTRGTLCPKMAHYEKVIHSPLRL KSPMKRVGKKGIGEDQYTRISWDEALDAIVNNFKETIDTYGSESILRYSYAGTMGVIQSP AADYFFRCIGATDQDRGICSPAKQAGFRSVYGDTLAIKPQEAQHSDLIVLWGINATATDV HILHDVNIAKKKGARVWIIDTHKTYTFSQAHEHIYVKPGSDGALALGMLHIIHRDGLADI DFIKKHVQGYDELVKEVLLDFTPGKAAEICGVSVERMTEFAHAYAKSKAPFIRLGSGLSR YGNGAMTCRAINALPAVVGAWQYPGGGLLSSASGSKFIGKDVMQQAHVHAPAKRLMPMIK LGEMLINPEGTKVHSLYIFSSNPAITAPDQNVVRRGLMRDDLFTVVHERFFTDTCKYADI ILPATTSVEHDDIYNSYGHYTIGTGYKLIEPIGESRSNWQVIAELAKRMGLEDDFFDLSE KDLIEQIVRTSSRISKRDQELILNGEPVEMTVPESYKMDFKTPSGKIELYNPQDVEPLIR YMPPYGDNAPFWLINGNDIRILDSSFCELDFNDPELMKLRIHPEDAKMYNINDGAEVEIY NDRGSVKIKAYYDDEVQRGTLVTLGVWWQSQSSDPHVAINALTAARPTDQGWGSTFYDVQ VHIRNLL >gi|292596539|gb|ADCV01000009.1| GENE 9 16713 - 18044 1681 443 aa, chain + ## HITS:1 COG:BS_braB KEGG:ns NR:ns ## COG: BS_braB COG1114 # Protein_GI_number: 16080012 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Bacillus subtilis # 6 434 4 430 445 308 44.0 1e-83 MNGNDNLSTRAYLAIGMMLFALFFGAGNLIFPAALGQQAGDNVGWALLGFVLTGVGLPLL GVAAMGYSSCKDVEELASRVHPIYGLLYTISLYLSIGPMFATPRTGTVAYEIAIKPFAEG LSMNMEPIFLALFFGISLWLSISPQKLVNRIGNILTPALLLVILLLIVKSFITPLGGYAA PQPAYGDAPTAVLQGFLDGYNTMDALASVVFAILVIDFVRLSGATSRAVITKTVMEVGAI AVGLLGIVYVFIANIGATSVERFGLFETGAPVLSVSANYLFGEFGQIILAIIVLLACLST SIGLITSCGTYFHKLTPKISYKLYVVIFSLAAFGLSMFGLKTIISAAIPVLMLLYPLTIV IILLALLHNVFGGRRCVYAWTVAFTMISALMTGLETAGIAPIALEQLFAQYIPFQSAGMG WVSFAVLGFVVGLIHKGLASDNK >gi|292596539|gb|ADCV01000009.1| GENE 10 18194 - 19267 1267 357 aa, chain + ## HITS:1 COG:L198485 KEGG:ns NR:ns ## COG: L198485 COG0371 # Protein_GI_number: 15673538 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Lactococcus lactis # 62 356 58 354 358 147 33.0 4e-35 MRSTHCLPSYSFGGHDVFDAIPKFTKLYGKSVAIIGGETALSKALPHIRPVLDKAGIKVL DIIHFGGECTFARGKEIAQMASVKDADFLFAVGGGKAMDTVKVVAIELDDKPFFTIPTIA STCAATSEVAAVYTADHTFDDVAFVNHPPVHCFIDADILVEAPSRYLWAGMGDTIAKHYE THLSARSREQDYNTQLGLTLASMCSEPILAHGIQAYKDSQANKRSDAFDTIAMTVIFTTG VVSGCVPMAYNSNMAHAVCYGCVTNKETEENHLHGEIVAYGLLILLTVDQQMDELQRWLP VYRELGWPTKLSQLDLTASHIPRIVEKATSVHDIDVSPYKITADMLTKAIQYMESLD >gi|292596539|gb|ADCV01000009.1| GENE 11 19312 - 19548 312 78 aa, chain + ## HITS:1 COG:CAC1208 KEGG:ns NR:ns ## COG: CAC1208 COG4728 # Protein_GI_number: 15894491 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 4 75 77 148 173 79 54.0 1e-15 MQEIVKGGLYRHFKGMYYYVLDVATHSETSEQFVVYQKLYDQRDLYVRPLDMFLSDVDHE KYPDVKQKERFKLMSGRD >gi|292596539|gb|ADCV01000009.1| GENE 12 19557 - 20333 952 258 aa, chain + ## HITS:1 COG:BH2659 KEGG:ns NR:ns ## COG: BH2659 COG0561 # Protein_GI_number: 15615222 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Bacillus halodurans # 1 252 1 252 257 109 29.0 7e-24 MEQKFFFFDIDNTLAVWPEGKIPESAQYSLDELKRRGHRVALATGRIQVDAKRFAEQAGL TDFVADGGHSITVNNELVSMIGMDRDACIKYLEYLESHNIPWAVTDRNKLGRITPYKEIL EWHPNWDVFKTTVDPNFDFHSVEEFYKIYVFFKEGEEEEKDIEYMTHKLIRYGDGCVLYE PMEKALGIRNMLEHFGMKPNQAVVFGDGYNDLSMFRPEWLNIAMGNARPELKAKADYITT DCDKDGIYNACKHFKWID >gi|292596539|gb|ADCV01000009.1| GENE 13 20470 - 21378 1206 302 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1589 NR:ns ## KEGG: Vpar_1589 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 302 1 302 302 503 98.0 1e-141 MNNKRRLFSTLLCVAALTAGLFVSGCGSDKAGGIGSVVSSVVDGGSDEKAAAKLNTLIDA TNRFNGDNATWGQNYADSLAKLKGGFQEGAIGRQPHYDTLKEALEQSKKEGSTFKEVDTE RDNVLNVLNELVPTFKDLKAYDDSKAYMNDGGAKGKELAAKYVAQVEKFDAAYAKFNDAL NKANTEQTKKQIEKLKKDGKKGYAAAMESTLRLTTLVENVEKAPKNADKQAVEKELNEIQ TLLKSINNDRGEVLVNSYNSVVGSVRQVLTDANENNLNDMIENFNNYIESYNNTTPDQFD SK >gi|292596539|gb|ADCV01000009.1| GENE 14 21591 - 22232 753 213 aa, chain + ## HITS:1 COG:SPAC57A10.03 KEGG:ns NR:ns ## COG: SPAC57A10.03 COG0652 # Protein_GI_number: 19114220 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Schizosaccharomyces pombe # 57 202 6 155 155 154 51.0 1e-37 MNWKRLALCAMLGITVLSTTACSTKTGEQPQGNTVKAETVAMPNFTNAPIADEYAIFDTN YGQFKVRLLGSKAPITVKNFDYLVKKGFYNGVTFHRVIEGFMIQGGDPDGTGAGGPGYTI PDEFSNDLHFNKMGVLAMANRGPNTGGSQFFITLGPTDWLDNKHTIFGTVVQGMDVVEKI GKVKTGRNDKPVEPVIINTITLEPITDDAKNGK >gi|292596539|gb|ADCV01000009.1| GENE 15 22210 - 22608 304 132 aa, chain + ## HITS:1 COG:VNG2274C KEGG:ns NR:ns ## COG: VNG2274C COG2827 # Protein_GI_number: 15791086 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Halobacterium sp. NRC-1 # 50 124 1 73 77 80 53.0 1e-15 MMRKMANKKSTSQESLSGECASTQEVQGIIVDCDTILNDASVQGDESKEMHYIYLVRCSD DSLYCGWTTDLKRRIDAHNGHIPGGAKYTRGRRPVTLVYAESFHQKQEAQRREYAIKRMT KTKKLRLIKGAK >gi|292596539|gb|ADCV01000009.1| GENE 16 22660 - 23118 583 152 aa, chain + ## HITS:1 COG:CAC2894 KEGG:ns NR:ns ## COG: CAC2894 COG4506 # Protein_GI_number: 15896147 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 137 3 135 137 81 26.0 5e-16 MKRVLVSVKSVQRDMDGKDTVVELISPGTSHEKGNAQYVRYEESSVTGLDGVKTTIKIHD DSIVLLRTGAVNMRHQYVRGEEREAVYETPYGDLHMAVNTHELTVDFHDGVGHVHLGYDI SVEGEWQFYNQLDIDVREDIEHGHEGNPEIGD >gi|292596539|gb|ADCV01000009.1| GENE 17 23084 - 24817 2380 577 aa, chain + ## HITS:1 COG:BH3808 KEGG:ns NR:ns ## COG: BH3808 COG0018 # Protein_GI_number: 15616370 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Bacillus halodurans # 1 577 1 556 556 526 46.0 1e-149 MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN PRAIAEALISHMNFDWLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRARD TIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAISI EYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGFD KLNAMNEADRVALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVHESDEIHHSVEALK ALGKVYEKDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWG ADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEV GVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVREAGIAFGN YSETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGRI IGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM >gi|292596539|gb|ADCV01000009.1| GENE 18 24833 - 26443 1996 536 aa, chain + ## HITS:1 COG:CAC2892 KEGG:ns NR:ns ## COG: CAC2892 COG0504 # Protein_GI_number: 15896145 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Clostridium acetobutylicum # 1 536 1 534 535 763 66.0 0 MATKYIFVTGGVVSSLGKGITAASLGRLLKNRGFNVTIQKFDPYINIDPGTMSPYQHGEV FVTDDGAETDLDLGHYERFIDINLSKRSNITAGKVYWSVINKERKGDYLGSTVQVIPHIT NEIKQNVYRVGKEDNADVVITEIGGTVGDIESLPFMEAIRQVKKEVGRNDVLYIHVTLVP YINAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKHISDEMKEKLALFCDVEPEAVIEN QTCSSIYEVPLMMQDQGLDDIVIKKLGLEDRPCDMTAWKEMVHKILNPNKDITVAIVGKY VALHDAYLSVVEALDHAGIATGTKVNIRWIDSEELDDTSVDPKEVFEGVEGIIVPGGFGS RGVEGKIRTIQYARENNIPYLGLCLGMQSAVMEFARNVCGMEGATSSEFDENAKYKVIDL MSDQVDVDKKGGTMRLGIYPCKVEAGTKTHEAYGEDLIYERHRHRYEFNNEYRQQLTDAG LVISGTSPDGRLVESIEVKNHPFFIGTQAHPELKSRPNNAHPLFRGFVDAILELKK >gi|292596539|gb|ADCV01000009.1| GENE 19 26453 - 26668 295 71 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1583 NR:ns ## KEGG: Vpar_1583 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 71 1 71 71 108 91.0 8e-23 MESILSIIGLFILAALKLEQFVYGKSGKEQSITGHIARRGLANIAGLIAFDHATVNSKSV VVCKKKKDAQK >gi|292596539|gb|ADCV01000009.1| GENE 20 26858 - 27421 1018 187 aa, chain + ## HITS:1 COG:TP0509 KEGG:ns NR:ns ## COG: TP0509 COG0450 # Protein_GI_number: 15639500 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Treponema pallidum # 2 187 3 188 188 246 61.0 2e-65 MSIIGKQLPEFTLDAFKKPELVKVSTADVLGKWSVFVFYPADFTFVCPTELEDVQNSYAE LKELGCEVYSVSCDSEFVHKAWSDASPSINKIEYYMLADKKHELADFFDVFQEESAMAYR GTFVVDPEGFVRTAEIHDMGIGRSAEELVRKVQAAQFVAKHGDQVCPARWKPGKDTLKPG LDLVGKI >gi|292596539|gb|ADCV01000009.1| GENE 21 27915 - 28364 611 149 aa, chain + ## HITS:1 COG:PA3815 KEGG:ns NR:ns ## COG: PA3815 COG1959 # Protein_GI_number: 15599010 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 131 1 130 163 92 38.0 3e-19 MRISTKGRYALMVLIDLVEQGQDKPVSLRSVAERQGISEKYLEGIVARLGAANLVDSIRG KYGGYRLSKSPKEYTIIEILLATEESMAIISTLDEGVSTDTVINERTVGFWAGLQNYIHD YLENVTLQDVIDGTYAKLDTKYDNWDGSI >gi|292596539|gb|ADCV01000009.1| GENE 22 28380 - 29315 813 311 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 308 3 304 308 317 56 8e-86 MSKIAKSFVELIGKTPLLATTRFGKKYGANANIFAKLEYFNPGGSVKDRIAAAIIQAAVE SGELQPGGTIVEATSGNTGIGLSAVGAALGYKVVIVMPETMSIERRKLMLGYGAQLVLTD GSLGMKGAIAKAKEIVTATSGAIEAGQFVNQANPAIHYRTTGPEIWQDTDGTVDIYVSGV GTGGTLTGAGRYLKEQNPDVHVVAVEPADSPVLSNGKPGPHKIQGLGAGFIPDTLDTNIY DEVIQVSNEDAFATSQAFGHTEGVLVGISSGAALWAAQELAKRPENKGKNIVVILPDTGE RYLSTALFPEV >gi|292596539|gb|ADCV01000009.1| GENE 23 29591 - 32995 4846 1134 aa, chain - ## HITS:1 COG:NMB0700 KEGG:ns NR:ns ## COG: NMB0700 COG3468 # Protein_GI_number: 15676598 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis MC58 # 224 681 978 1433 1815 120 30.0 1e-26 MKSSKNCKVTAAFLAAAALGGVTHAEPTLNMNDLVGTSTSAESTTQSPTSVATPVVKPMA TQPVLPATPQPATVVQQQTPPMAQPQPSYVMQPATVSPVQTQQVTPLQAVPQQVVPMQSQ QQVQTQPQYVVNKDTKAVMEPTLAMHSLINVQRKTEPVTIEKPVDGKQQVQTTQVQRTPV VIQQESIAPLTVSNTTVTKAVVAKQRLTIRDIQRAERERLAQLAAEEASQQENLSQADQQ QLAQKQAEAQRQAALQAQQQTEAQRQAALQAEQERIAAQQAEAQRQAAIRAEQERIAAQQ AEAQRQAAIKAEQERIAAQQAEAQRQAAIKAEQERLAAQQAEAQRQAAIKAEQERIAAQQ AEAQRQAAIKAEQERLAAQQAEAQRQAAIKAEQERLAAQQAEAQRQAAIKAEQERIIAQQ AEAQRQAALKAERERILAQQAEEERLAAEEAARQRAEAATKAEAERQAAIRAEQERMAAQ QAEAQRQAAIKAEQERIAAQQAEAQRQAALKAEQERIAAEKAKAERETAIKAEQERIAAK QAELARQAAIQEEQERLAAEQLAKEEAAAAAKARAEAEAKALAEADAAAKAQAEAEAKAK SEAETKQVQESKLPQSYVNARNEASTKGSPVTEEKNILSQPIEPPLQADASAKISLAFDA KNYESMSTTVDNKEIKYRAFEYIPYVANPIDIDQQYMNIYVPEEYFNNGTINGYNTQTAP IFMPNAVGGYMPSQAMTPKMENGKPNSVLYALSRGYVVASPSTRGRTNKASDGNFIGKAP AVIVDLQAATAYLHANDSAMPGNANRIITNGTSAGGGVSLLQGATGNSSDFQPYLQALGA ATAATNVYAASAYAPITNLDAADMAYEWSYNGITSFNKVTMGQGELPQANVGGNSAPPQR TMQRVNLNTDDLSYSKMLSEHFPDYVNNLQLRDSLGRILKLDKNGNGTFKNYVKEFIVAA ANKAAAQGTDLSKHTYLVRDNKTGAIKDINWEAYNHFVSRSKAPGAFDSRANDTGENNLF GTSTTDNNHFTITAALHDSTANQDVYVENAKIVTMMNPMNYLGSPAATNARFYRIRYGTA DSNTSVAIPLIVGTRAQNLGYRVDMATPFNVDHSGDYDLEELFNWMDNIVKNGR >gi|292596539|gb|ADCV01000009.1| GENE 24 33438 - 35432 2858 664 aa, chain - ## HITS:1 COG:BH0828_3 KEGG:ns NR:ns ## COG: BH0828_3 COG1299 # Protein_GI_number: 15613391 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Bacillus halodurans # 327 659 2 335 336 335 57.0 1e-91 MKITDLLKPQSILLNADPVTKADAIYTLGELMDKGGYLTDKAEYLKAVFAREESGSTGLG DGIATPHAKSAGVKEPGLAAMVVPNGVDFEALDGQPSRLFFMIAAPEGAADTHVEVLSKL ATMVIDPDFKEALIQAATVDRFLELITAKEEGNFDPSVEGYIKPAEDQKATSITDAIEAK ATEAIEKVAPKISVDNPHYDVLAVTGCPTGIAHTYMAAESLERKAKEMGISLKVEKNGAS GVKDALTAEEIAHAKCIIVASDRQVEMARFDGKPMIQTKVANGINKAEELLTEAMAGTAA VYQASAADREAAEIAASASDSVGRQIYKHLMNGVSHMLPFVIGGGILIALAFLFDVFDPA NPKNFGSGTPLAAFLMQIGGASFGFMLPVLAGYIAMSIADRPGLVAGFVGGLLANQGGSG FLGALIAGFAAGYLVLLVKKLVSGLPQALEGTKPVLFYPVLGVLFIGIAITFIINPPVSA LNHWLMDSLQSMGTTSRVLLGLIFGAMMSVDMGGPVNKAAYVIGTGALATGEYGIMAAVM AGGMVPPLAIALCTTFFPSRFTEAERKSGITNYIMGLSFITEGAIPFAAADPVRVLPACI IGAGTAGALSMFFECTLRAPHGGIFVVPTIGNPLLYLASIAIGSIVACFILALVKPSLKN SIAK >gi|292596539|gb|ADCV01000009.1| GENE 25 35466 - 36380 1076 304 aa, chain - ## HITS:1 COG:BS_fruB KEGG:ns NR:ns ## COG: BS_fruB COG1105 # Protein_GI_number: 16078503 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Bacillus subtilis # 1 303 1 300 303 272 49.0 5e-73 MIYTITFNPALDYIVRLDHLKTGTINRTIQEYVLGGGKGINVSIVLNNLGMDTTALGFIA GFTGEEIVTQLKKFGVKEDFIRLREGLTRINVKVKASDEETEINGRGPIIATDELEALYK QLDALTEKDTLILAGSIPSSLPSDMYELIMERLQHKNIRIVVDATKDLLTKVLPYKPFLI KPNNHELSEIFGRTLSTKDQLVEAAKTLQEKGAQHVLISMAGDGAILVSADGTVYTSPAP KGTLVNSVGAGDSMVAGFITGYEKTGDLQEALYWGISSGSASAYSENLATLEEVETLLSQ VRVK >gi|292596539|gb|ADCV01000009.1| GENE 26 36409 - 37722 1090 437 aa, chain - ## HITS:1 COG:CAC0744 KEGG:ns NR:ns ## COG: CAC0744 COG1757 # Protein_GI_number: 15894031 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Clostridium acetobutylicum # 1 433 5 436 448 277 38.0 4e-74 MGLLASILVILIAVANSIAIGYALIVVWSIMAYVFYRKGYALKELLNLSWTGAKTSIIVM QIFLLIGWLIAMWQAAGVIPMIIATGIDLIDPSIFIVCAFLITAIVSMLLGTALGTVGTI GIVLITMARAGSIPENIVVGAIIAGAYFGDRNGPLSSSASLVAALTHTKVSTNIPIMFKD GIPALIISTVLYLLLSQWYPLNYENSLLSDTIHFIFNIDWTLWIPVIIVIGLLPLKVSIR WPIGLSALAAAILAYTNQDASLSELGWYTLTGFELPHYNPLANIIHGGGLQTMFIPTLSI FMATTISGMLEGVGFWNDIRQLLERAKTRSDVFAANVGLAFLTGAVGCSQAIAVVMTHSI MRITYAQRGIQDEDVMLDFENSGILIAPLQPWNIAAYVPIVMMGTSSTGYVPFAFFLYLV PLIYWLRLRKQDQPIIR >gi|292596539|gb|ADCV01000009.1| GENE 27 37808 - 38641 997 277 aa, chain - ## HITS:1 COG:BH3412 KEGG:ns NR:ns ## COG: BH3412 COG0253 # Protein_GI_number: 15615974 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Bacillus halodurans # 1 271 1 277 286 229 44.0 4e-60 MKLTKMHGLGNDFILFADPQGTSKDYTDLAIRLCDRRTGIGADGLAILVPSETCDVRMRI INSDGSEAEMCGNAIRCFAKYAYEHGETTKETFTIETLAGVMKPTLTIENGIVTQVTVDM GKPFFKAQDIPMNVNMDKVIDVDLNVNGETVTVSSVLLGVPHTEVFIDDITKAPVTTQGP ILEKHDAFPANTNVNYIEVVNDKHIKVRTWERGAGATLACGTGSCASAAMSFEKGLTGRE VDVELYLGTLHISYLEDGTVLMTGPAEEVFETELPID >gi|292596539|gb|ADCV01000009.1| GENE 28 38960 - 40687 2243 575 aa, chain + ## HITS:1 COG:BH3073 KEGG:ns NR:ns ## COG: BH3073 COG1080 # Protein_GI_number: 15615635 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Bacillus halodurans # 2 566 4 567 572 524 48.0 1e-148 MRIQGISGSRGVAVGNVYRYIQEEIVIPDYNVTEDKVEEEIGKFATAMASTLKQLDTIRK KALDEMGPEEAAIFEAHMQIAQDPSLSDGIKSLVESSHMNVVAATAQTIETFANIFLGME DAYMRERGADIKDIGDRLMRNMLGMNPRGLSHISGEVILVAHDLAPSDTASLDKAVVKGI VTAAGGPTSHAAIMARTLEIPAVMGVGDIESFADGDKAVVLGTDGIVEINPSDADWTEYT NQALAFQEELKRLRESANLEATTIDGHHVELFGNIGKAKDAKHALTMGAQGIGLYRTEFL YMENDELPAEEIQFEEYKKVAQDMKGQPVIIRTMDIGGDKELKCLDLPSEMNPFLGYRAI RISLNRPDIFKVQLRALLRASAFGDIHIMYPMIASVEEVKQANAMLSECKEELEAEGKDF NKDIKVGIMIEVPAAAVISPILAKYVDFFSIGTNDLCQYTLAVDRMNEAIGSLYQPLHPG VLRLIKHVIDASHEQGKFTGMCGELASDPVATMILLGLGLDEFSMTASSIPLIKNILRSV SKTECEEVANKALTMDTAEEITEYAKSVLAEKGLL >gi|292596539|gb|ADCV01000009.1| GENE 29 40824 - 41084 485 86 aa, chain + ## HITS:1 COG:SA0934 KEGG:ns NR:ns ## COG: SA0934 COG1925 # Protein_GI_number: 15926669 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Staphylococcus aureus N315 # 1 82 1 82 88 67 42.0 6e-12 MKELTVEITNESGLHARPATAFTQLAAKFASKVTIAANGKTADAKSILTVLTLGATKGTS VTLTADGADEDEALAALSEFLTTNHD >gi|292596539|gb|ADCV01000009.1| GENE 30 41178 - 41456 405 92 aa, chain - ## HITS:1 COG:BH0558 KEGG:ns NR:ns ## COG: BH0558 COG1937 # Protein_GI_number: 15613121 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 6 90 16 100 100 65 41.0 3e-11 MKQCMDSENLHRRLRKILGQVQAIDRMIEEDIPCEDVLSQINAAKSALHKVGQVILEGHI NHCVRDGIEHGDVEKTISDFTKAVERFANMGK >gi|292596539|gb|ADCV01000009.1| GENE 31 41788 - 42594 743 268 aa, chain + ## HITS:1 COG:CC1516 KEGG:ns NR:ns ## COG: CC1516 COG0744 # Protein_GI_number: 16125763 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Caulobacter vibrioides # 89 256 240 407 794 171 50.0 1e-42 MKVFRYLRNLVVFVVVMILAMFIYDGYHSFQGTNRESKAHTIVEKQIEQSEDTLSRTDRI IRLFTFRDKVQIALNQRVSKEHWVKGDVIPEYTKNALIAIEDKRYYKHGAIDVLGIIRAL YTNTIAGETLEGGSTITQQLVKNLFLSSKRIMSRKVEEAILASEMEHYYSKEEILTMYLN TVYYGHNYYGIYEAAHGYFGTSPSRLTLGQSALLAALPNAPSYLDPYTNYEGAKARQKLV LEQMVDQGMITQAEADYAYEQDLELVEE >gi|292596539|gb|ADCV01000009.1| GENE 32 42718 - 43419 542 233 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1570 NR:ns ## KEGG: Vpar_1570 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 233 1 233 233 355 78.0 9e-97 MDNVELKRYEKGNFSSIYIGVKPIIKFAMLRLENFIAYYLRGPGGVDYKSELLDVDSYAR EIFYIEQADAYKIENWIVYYDDEHDCMAVRHCFWDKALDRELIMADESLRATVREEYIVD TIPHICNQTIVSVNVMAKHNILNAINAFDTAISKMNILELFRNVDYSTGNYRISRSYDLD VRIEAIINEEQNELYSIIGEIKSFIIETLKEPLDTTDDYKIALDYQFSPIDII >gi|292596539|gb|ADCV01000009.1| GENE 33 43754 - 44965 1507 403 aa, chain + ## HITS:1 COG:CAC0973 KEGG:ns NR:ns ## COG: CAC0973 COG0137 # Protein_GI_number: 15894260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Clostridium acetobutylicum # 6 398 4 396 400 453 56.0 1e-127 MGKANKVVLAYSGGLDTSVIIPWLKENYGAEVIAVCVDLGQPEDYDAVEKKAIKSGASKA YIVDAKEEFVKDYVWPTVKAGAIYEGKYLLGTSFARPLIGKILVDIAKKEGADAIAHGAT GKGNDQVRFELTIKALAPNMKIIAPWREWDLKSRTDCMEYAAKHDIPVVATKSHPYSMDQ NVWHLSHEGGDLENPANAPKDDVYLVTHTPEQAPDEAGYVTVSFKEGVPVAVDGQEGTPL QILEKLNEIGAHYGVGVVDIVENRLVGMKSRGVYENPGGSIIMYAHRELEYLCLDRATYH YKELIANKYAELVYDGMWFAPLMNALQAFVDETQKTVTGEVKLKLYKGNIISAGSTSPYS LYSEDFVTFEEDDVYDQSDAEGFINLFGLPLKINALMKEKAGK >gi|292596539|gb|ADCV01000009.1| GENE 34 44965 - 46392 1617 475 aa, chain + ## HITS:1 COG:BH3186 KEGG:ns NR:ns ## COG: BH3186 COG0165 # Protein_GI_number: 15615748 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus halodurans # 1 457 1 457 458 526 57.0 1e-149 MAKLWGGRFTKGTDKAVEDFTSSIAFDARMYAEDIAGSKAHATMLAKQHIISDADRDAIL VGLTKIKNQIDKGEFPFSVALEDIHMNIEKRLTDDIGEAGGRLHTGRSRNDQCAVDLHMY VRKAVVEMGELIVDMQKALIETAEKYSDVIMPGYTHLQRAQPVLFGHHMMAYFSMLERDF DRLLMVFKHADIMPLGAGALAGSTYGIDQTYTQKLLGFSRIYENSMDAVSDRDYVVEFLS FASLVMMHLSRLSEELILWSTNEFNFIELDDAHCTGSSIMPQKKNPDVCELVRGKTGRTY GHLLGLLTTLKGLPLTYNKDMQEDKEGIFDAIDTVHFALSINAAMIRGMKVNGAHMKAVL DDDFSNATDMADYLAKKGVPFREAHEIVGNAVHHCIEKGCVLLDLSVEDFKAISNHFDAD ILDAISIEACVAGRNNYSGTAPECVERQRNNGKIIIAAEEKQIAEWKEIVESVEE >gi|292596539|gb|ADCV01000009.1| GENE 35 46982 - 48313 1594 443 aa, chain + ## HITS:1 COG:STM0700 KEGG:ns NR:ns ## COG: STM0700 COG0531 # Protein_GI_number: 16764070 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Salmonella typhimurium LT2 # 2 426 3 427 439 454 55.0 1e-127 MKTTAKKMSVFQLTTMVAANMLGAGIIMLPTNLAQVGTISVLSWLVTAVGALLLAYIFAQ AGMFSQKQGGMGGYAEHRFGKTGHFMASYAYSISLIIANIAIAVSAVGYGAAFFGVDLNA TQTSQVTIVLLWFAAILNFRGNRFTGRLSNMTIWGSIVPVLLIGTIGWYWFDPSIYWAAW NPNDLPLYDAVKQSISLTLWGFLGFESAAANADAVENPKKNVPIATVAGTLAVAVVYILS TNVMAGIVPNVDLLNSNAPFGLTFVYMFNDTIANIVMAAMVISCFGALLCWQFTLSRVFK SAAEHGYFPKIFARVNSKDAPVRGVLILLAVETLLTLFTASESLREQFEILVNLAVVTNV VPYVLCILAVPTMMRMAGVAESRIKRSNYLFGIGVLYCLYAIYACGFDAMVGSAVAVSIG LVIYVLRKAWDTRRAHRLQQSID >gi|292596539|gb|ADCV01000009.1| GENE 36 49048 - 49986 261 312 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 68 310 43 315 320 105 26 8e-22 MGKRFVKQLGQFIVTLFGITFLTFCLTYLAPGDPVTMLLETADTIVSQELIDETRAQLGL DKPFVVQYANWVVNAAQGDLGMSYSAKKPVVDRMLEALPGTLMLAGTALVFTLLYALPAG IISALNRNKWVDYVLRFLSFVGVSMPTFWLGLVLIYIFGLKLGLVPIASSRVTASGVILP AITLAVVVGSKYMRQVRLVILEEMQKDYVIGARARGVSEIKILFGHILPNAVLPLITILG VVIGWLLGGVAVVEMVFSWPGLGNMAIYAITMRDYPLIEGFVLWVALAYMCINALVDASY ILLDPRLKRERA >gi|292596539|gb|ADCV01000009.1| GENE 37 49986 - 50807 1090 273 aa, chain + ## HITS:1 COG:FN1522 KEGG:ns NR:ns ## COG: FN1522 COG1173 # Protein_GI_number: 19704854 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 3 272 5 274 276 276 53.0 3e-74 MAEFIQKHKLFSFYSGLMIIIVLIAIFAPWLAPGDAFTSNISQALQAPSSQHWFGTDKLG RDVLSRIIYGTQLSLFMGVSIVVIMVSIGTIIGAIAGYFGGKVEMVLMRLADIMLSFPGI VLAIAIAGILGGSIVNTILALSVVGWAKYARIVRSMTLKVRGEEYVTAAVMMGASTTAII RRHIIPNIMPLVITTGALDIGAIMIEVAGLSFLGFGAQPPTPEWGLMLNEGRQYLQTSPW LMAFPGMSILIVVAIFNLWSDSLRDVVDPKNQG >gi|292596539|gb|ADCV01000009.1| GENE 38 50961 - 52529 2000 522 aa, chain + ## HITS:1 COG:FN1523 KEGG:ns NR:ns ## COG: FN1523 COG0747 # Protein_GI_number: 19704855 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 1 521 1 523 526 447 45.0 1e-125 MKKSWKKALLAGLSIVMMGSFIAGCGSDNNGAANKDVLKVGVTNFASTLEPTENFFAWVV MRYGVGETLAKFDEQMKPQPWIASKWEVSPDHKTWTFTINDKVKFSNGKKVDAAAVKASI ERAFAKSNRAKTFFEYDSMEANGQQLVIHTTKEYPNMPGLLADPLFLIVDVQAEKDGRNF AKEGPIGTGPYVVKSFTKERAEMAANENYWDGTVPFKTVEIPSIDDPNTRALSLQSGDVD MAVNIGPGEIGLFQGNDKFKVDEIASLRVVLARINQKGILGDDKVRAAVISATDRKNYAD VLLKGTFIPGSAPIPPSMDYGFNDLKDPNAYNPERSKQLLAEDGWKDTDGDGILDKDGKP LTFNFIVYNSRAELPLYAEAVQADLKKVGIDMKIKTVDYNLIDKMGQDGDYDMLISNIVT ANTGDPIWFLANYWHTNNNGSNPQNGSGYSNPQVDQLLDAAETEFDPAKRRDYAMQIQQL LMNDGAALFLGYPKTNIVTGSYLKGAVMYPSDYYWITNKITK >gi|292596539|gb|ADCV01000009.1| GENE 39 52542 - 53339 441 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 16 251 23 258 563 174 39 2e-87 MAENILTVENLNIAYQGVPAVMDVNFTLERGKVLTIVGESGSGKTTVIRALMGLLSVGGE VTDGTMIFNGHNLRTLSKSEWRAIRGKDMAMIFQDSGSALDPIVRIGKQFRELFTSHIEI TNDECDRRAIELLESVSLPNGADILRRYPHELSGGQRQRVGIAMALALDPALLIGDEPTS ALDVTTQSQVVMQMLELAKEHNSAIVMVTHNLGVAAYMSDYIIVMKKGRVVDAGTPQDIL ENPSNEYTKQLKDAVPTLGGGRYID >gi|292596539|gb|ADCV01000009.1| GENE 40 53332 - 54147 530 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 252 8 265 329 208 42 5e-53 MTNYAVEIKNVCKRFPLPTGGELEACKDINITLEKGQSLGIVGESGSGKTTLVRMIMKML PITEGEIYVDGVEIQHMNSEQTKEYRKKIQMVFQDPSAAFNPRMKVKDIILEPLYNFGLL EKGKEEQIAGDYLEMVDLPREFMHRYPHEMSGGQRQRVAIARAIVLEPEILVLDEATSAL DVSVQDSIAYLLARLQKKKNLTYLFIAHDIAFIRTMCHKVVVMYKGAIVEELDAFHLADA KHPYTKVLLSSIFEIGQDHKPLTLDEAALEA >gi|292596539|gb|ADCV01000009.1| GENE 41 54534 - 56087 1653 517 aa, chain + ## HITS:1 COG:FN1523 KEGG:ns NR:ns ## COG: FN1523 COG0747 # Protein_GI_number: 19704855 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 29 514 37 522 526 418 45.0 1e-116 MKGLRKALLIGMTLGVTMLGTIGCMNQDSASSNDVLKVGAISFAGTLEPTENYFSWAVVR FGIGETLIKFDDQMKATPWLATSWKQGDDKLTWTFTINDKVKFSNGNSLTAEAVKASLER TFAKSKRAKTFFNYTEITANGQELTIKTDKEYYNLPNLLGDPLFLIMDVTAEANGRDIAK EGPIGTGPYVVSSFTKERAELKRNDNYWDGKAGFAKVEIPSINDANTRAMALQAGDVDMA VNIGPGEYSIFQNDKKFTIYEVASLRDVFVRMGQKGKLRNPNLRAALIAAADRESYAKNL MKDTFVAGKAPLPPSIDYGFNQLRDPNKYNVERAKELLKREGYEDTNGDGIVDKDGENLV LDFYAYTTRPELPLYAEALQADYKKIGVDLRIKIVDYAVIDTLSQSGDYDMIISSVVTAN TGQPVWFLKQYWGIGVETNGSGFSNPRFDELLALGESSSDPVVRRNAVINAQQLMLDNAV ALFLGYPKINIVGNKHIDGIKITPSEYYIITKDLKKK >gi|292596539|gb|ADCV01000009.1| GENE 42 56155 - 57084 950 309 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1558 NR:ns ## KEGG: Vpar_1558 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 309 1 309 309 537 99.0 1e-151 MKKGYIKLIAAIVLGAAIIGGGIYGVYTLLSSNTTTILYRSTVDDKINAIRPYIVALDAY NSYSVAYANQLQPTLEELRNGSHNTTITLPKYKELKAALEVAKQDSSTPYEDVNQATNDV LVVLDQIIPIADQLQSYYVERRYEKDNYKGSDELAAQYVPLAEQFYATYNALDLALDNRN NELYNERMTEYQGEKRENAVNFIEINLITAQTIDLIDPDGNTDTQKVESNLQQITQRLNK LQPGTTPEVQNAVREYQDSVKEFVAEARNYIIINSSYGEAYTQLFTKYNKMIGKANAVNM ADLDVTEKK >gi|292596539|gb|ADCV01000009.1| GENE 43 57399 - 60302 2118 967 aa, chain + ## HITS:1 COG:MA1603_2 KEGG:ns NR:ns ## COG: MA1603_2 COG1061 # Protein_GI_number: 20090461 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Methanosarcina acetivorans str.C2A # 186 802 9 618 618 565 48.0 1e-160 MSESNHLINFATSSELIANGEGRNVLSAIEDGLRNCDEFLISVAFITPEGLLTLKPILKE LEERGVRGRVLTTDYLGFNSPQVLEDLGNLNNIELKVYCTTQGSGHGFHTKGYIFRKDES YQIIVGSSNLTINALKKNREWNTRSEAHCSDTYAREITEEFDLYWNSKFSIPYEDFIPWY KPRWVRPERTSQRTVAEQFRKIDLLQLEPNSMQQQFIANFNELRANNAKRGLLISATGTG KTYAAAFAMREMRPKRILFLVHREQIAKQAIASFERIYNDPSITFGLVSGNAKYYNATHV FSTMQMMGRNDVMKQYAPKEFDCIIIDEVHRAGSDSYQRIIEYFEPQFLLGMTASPERTD GYDLYELFDHNIIYEIRLQQALEEDLLCPFHYFGISDLWVDTQEDISDMEVSFSNLSTKE RVDKIIEKIRYFGHSGSRVKGLVFCSNRVEAKALSDAFNERGVYRTVCLTGEDSQEIREI AIARLTGTGDYQGRSDLQLDYIFTVDIFNEGVDIPEINQVIMLRQTESPIIFIQQLGRGL RKFEDKEYVVILDFIGNYTNNFMIPLALSGDRSYNKDTLRRYVQAGNRIIPGTSTVHFDK IAKQRIYESIDTARFSDMKLIKEAYFNLRFKLGRIPKISDFADHGSIDVSRIFSKFKSYH HFLIKVKDKDYDISFTPVQERMLHFISQKLTTGIRVRELLLLQALLDGRDDVINYVSEEL FDSYNVDLSEYGRVNLINMMTNQFGVQVAQKTFADSEFIEFSNGRYGISRIFKQALEDNN FKEQVQELIAYGLKQFNDKYKDNIYGNTPFALYEKYTYEQVCQLLEWPQNEVPLNIGGYK FHKETKTYPVFINYHKADNIQDTIKYEDRFENPGLLKAISKNKRTFASDDVQTAFNADEL GVAMHLFVRKNKDDEESKEFYYLGPIHSTGQENAKEIFMVNGTAAVELEYVLEVPVRDDI YDYIVNG >gi|292596539|gb|ADCV01000009.1| GENE 44 60311 - 60715 489 134 aa, chain + ## HITS:1 COG:Cgl1127 KEGG:ns NR:ns ## COG: Cgl1127 COG0494 # Protein_GI_number: 19552377 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 5 134 2 130 131 97 43.0 5e-21 MSEQRKHIEVVAAIIKKDNTILATQRGYGDLKDGWEFPGGKIEPGEPHEVALIREIKEEL EADINIQEHIITIEYTGYEKFDLTMHCYLCSLKNDSNITLVEHEAAKWLSKETLYSVDWL PADIDAVDEMYRRL >gi|292596539|gb|ADCV01000009.1| GENE 45 60902 - 61720 958 272 aa, chain + ## HITS:1 COG:all3918 KEGG:ns NR:ns ## COG: all3918 COG2897 # Protein_GI_number: 17231410 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Nostoc sp. PCC 7120 # 16 259 26 277 277 162 37.0 5e-40 MSNFITPTELLACLDEVIILDARGYQDYKKGHIKGAYAVDLDKDLTGPLGEHGGRHPLPD MEQLAHTFESYGITRNSKVVVYDSWLFLAGRLWWTLRYMGLTDVRVLSGGIERWVREGHL LTKEPTPLPAEPSIFNYELQTDMVMSRDEVLKASESGDHVIIDARAPFRYDGSQVDTMDG MTGHIPGAVNHFYESGYTVDGPKSLKDLEAEYYNEIYQNRPVVTYCGSGVTACNALLTMS EVGLESALYVGSSSDWVTYEGFPLSTGVETLN >gi|292596539|gb|ADCV01000009.1| GENE 46 61734 - 61961 285 75 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1554 NR:ns ## KEGG: Vpar_1554 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 75 1 75 75 135 97.0 4e-31 MNLLKQLLTVVAFGYLCYHIYTFGPGMFNVTVLVILILSAVANYFREKRESDLKANENAR KARAEARHAKKHKKQ >gi|292596539|gb|ADCV01000009.1| GENE 47 62099 - 62854 766 251 aa, chain + ## HITS:1 COG:lin1894 KEGG:ns NR:ns ## COG: lin1894 COG0708 # Protein_GI_number: 16800960 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Listeria innocua # 1 251 1 251 251 383 70.0 1e-106 MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLELPGYEQYWNSAVKK GYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYDNFYLVCCYTPNSQRELARLDYRM TWEDAFRNYLLELDKKKPVILCGDLNVAHQEIDLKNPKMNRKNAGFSDEERAKMTELLGA GFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKIHQQIFGS DHCPVELVIDL >gi|292596539|gb|ADCV01000009.1| GENE 48 62923 - 63612 612 229 aa, chain + ## HITS:1 COG:AF0442 KEGG:ns NR:ns ## COG: AF0442 COG0603 # Protein_GI_number: 11498054 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Archaeoglobus fulgidus # 6 229 2 215 239 167 40.0 2e-41 MAQKQKAVVLFSGGVDSTTCLALAIERFGKDNVVPLSIQYGQKHSKELEAAIAILEYYNM KGKTMDVTKLFAFSNCSLLVQSSEDIPQGSYKEQQDAEGKGTVSTYVPFRNGLFLSAAAS LALSLDCGYIYYGAHSDDAAGNAYPDCTEQFYKSMGDAIFEGSGKECSLEAPFINANKAD IVKEGLRLNVPYHLTWSCYEGGDKPCGHCGTCIDRAKAFHANGVEDPAL >gi|292596539|gb|ADCV01000009.1| GENE 49 64084 - 64575 747 163 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1551 NR:ns ## KEGG: Vpar_1551 # Name: not_defined # Def: protein of unknown function DUF988 # Organism: V.parvula # Pathway: not_defined # 1 163 1 163 163 234 98.0 6e-61 MISTRKLTISAMVVSLYIVVLYVTQSVSFGAYQIRIATSLYALAYAFPFLVIPMGIGNLI SNFLFGGLGILDMMGGFGVGVLTTGIIVGMRKLGLSAWWVMLPIVFVPALCVPMWLSPLL GIPYWPLVLNLIVGQTIPAILGSVLVKALISRPSMAALLGAFK Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:08:07 2011 Seq name: gi|292596538|gb|ADCV01000010.1| Veillonella sp. 3_1_44 cont1.10, whole genome shotgun sequence Length of sequence - 38535 bp Number of predicted genes - 38, with homology - 38 Number of transcription units - 15, operones - 8 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 7 - 62 18.2 1 1 Tu 1 . - CDS 91 - 1347 1803 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 1388 - 1447 8.4 - Term 1643 - 1685 10.3 2 2 Tu 1 . - CDS 1701 - 3161 792 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 - Prom 3204 - 3263 6.0 - Term 3229 - 3272 7.1 3 3 Op 1 . - CDS 3302 - 3994 979 ## COG1802 Transcriptional regulators 4 3 Op 2 . - CDS 3991 - 4887 867 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase - Prom 5044 - 5103 9.8 + Prom 4932 - 4991 8.4 5 4 Op 1 . + CDS 5093 - 6049 799 ## COG1284 Uncharacterized conserved protein + Prom 6129 - 6188 7.6 6 4 Op 2 . + CDS 6215 - 7852 1881 ## COG0033 Phosphoglucomutase + Prom 7865 - 7924 7.7 7 5 Op 1 9/0.000 + CDS 7987 - 8262 442 ## COG3830 ACT domain-containing protein 8 5 Op 2 . + CDS 8271 - 9116 1084 ## COG2848 Uncharacterized conserved protein 9 5 Op 3 . + CDS 9095 - 9628 667 ## COG2848 Uncharacterized conserved protein 10 5 Op 4 2/0.000 + CDS 9663 - 10814 1325 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 11 5 Op 5 . + CDS 10821 - 12014 1626 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 12 5 Op 6 . + CDS 12016 - 12210 102 ## Vpar_1540 hypothetical protein + Prom 12221 - 12280 7.2 13 6 Tu 1 . + CDS 12353 - 12589 207 ## Vpar_1539 ATP synthase I + Term 12623 - 12675 -0.8 + Prom 12751 - 12810 7.7 14 7 Op 1 40/0.000 + CDS 12835 - 13527 566 ## COG0356 F0F1-type ATP synthase, subunit a 15 7 Op 2 37/0.000 + CDS 13551 - 13778 506 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 16 7 Op 3 38/0.000 + CDS 13797 - 14294 708 ## COG0711 F0F1-type ATP synthase, subunit b 17 7 Op 4 41/0.000 + CDS 14299 - 14850 668 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 18 7 Op 5 42/0.000 + CDS 14867 - 16405 1834 ## COG0056 F0F1-type ATP synthase, alpha subunit 19 7 Op 6 42/0.000 + CDS 16409 - 17263 957 ## COG0224 F0F1-type ATP synthase, gamma subunit 20 7 Op 7 42/0.000 + CDS 17282 - 18706 2154 ## COG0055 F0F1-type ATP synthase, beta subunit 21 7 Op 8 . + CDS 18710 - 19117 507 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 19118 - 19162 9.7 - Term 19106 - 19151 8.5 22 8 Tu 1 . - CDS 19165 - 20073 955 ## Vpar_1530 hypothetical protein - Prom 20103 - 20162 17.5 - TRNA 20183 - 20258 91.0 # Val TAC 0 0 - TRNA 20264 - 20338 78.0 # Glu TTC 0 0 - TRNA 20343 - 20418 90.0 # Asn GTT 0 0 + Prom 21072 - 21131 6.3 23 9 Op 1 11/0.000 + CDS 21159 - 22001 516 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase 24 9 Op 2 . + CDS 22021 - 22581 394 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase + Term 22600 - 22640 7.1 + Prom 22654 - 22713 5.4 25 10 Op 1 . + CDS 22753 - 23304 642 ## COG4475 Uncharacterized protein conserved in bacteria 26 10 Op 2 . + CDS 23314 - 25077 1418 ## Vpar_1526 hypothetical protein + Term 25168 - 25218 14.0 - Term 25163 - 25199 7.5 27 11 Tu 1 . - CDS 25234 - 25959 678 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 26002 - 26061 7.6 + Prom 26061 - 26120 10.0 28 12 Tu 1 . + CDS 26232 - 27797 1917 ## COG1151 6Fe-6S prismane cluster-containing protein + Term 27851 - 27893 -0.8 + Prom 28244 - 28303 4.2 29 13 Op 1 9/0.000 + CDS 28323 - 29012 808 ## COG1760 L-serine deaminase 30 13 Op 2 . + CDS 29024 - 29896 1105 ## COG1760 L-serine deaminase 31 13 Op 3 . + CDS 29969 - 31384 1501 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 32 13 Op 4 . + CDS 31414 - 33351 1996 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 33414 - 33445 4.1 + Prom 33355 - 33414 1.5 33 14 Op 1 . + CDS 33470 - 34297 1025 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 34 14 Op 2 11/0.000 + CDS 34290 - 34631 291 ## COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 35 14 Op 3 . + CDS 34647 - 35300 579 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 36 14 Op 4 . + CDS 35297 - 36718 1445 ## Vpar_1516 hypothetical protein 37 14 Op 5 . + CDS 36747 - 37211 633 ## Vpar_1515 hypothetical protein + Term 37256 - 37305 7.0 + TRNA 37658 - 37733 86.3 # Thr TGT 0 0 + TRNA 37744 - 37828 69.0 # Tyr GTA 0 0 + TRNA 37834 - 37909 89.3 # Met CAT 0 0 + TRNA 37941 - 38016 82.7 # Thr GGT 0 0 + TRNA 38022 - 38098 86.1 # Met CAT 0 0 + Prom 38024 - 38083 80.4 38 15 Tu 1 . + CDS 38279 - 38533 331 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|292596538|gb|ADCV01000010.1| GENE 1 91 - 1347 1803 418 aa, chain - ## HITS:1 COG:BS_yweB KEGG:ns NR:ns ## COG: BS_yweB COG0334 # Protein_GI_number: 16080831 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Bacillus subtilis # 17 416 28 423 424 392 47.0 1e-109 MSGYNPYENMLNTLDVAAEKLGYTRSEYEVLRHPERELKVAVPLQLDNGEVRVYEGYRCQ HSTLRGSAKGGLRFHPDSDENEVRALAAWMTIKNAIANIPYGGGKGGIKVDPKTLNPREL ERLTRNFVRRIAPIIGVNTDVPAPDVNTNAQIMSWIADEYSTLKGEWSPGIVTGKPIEVG GSLGRNEATGRGCLIALQSYLAKKNLDIKNLTVAVQGFGNVGSVGARLIAQAGAKVVAIG DVSVNIYNPNGLDVEKAYEYANSHGRSLEGYSEPGMTTIGPQELLAQPVDVLYMAALENQ LNKDNMENIQAKIILEGANGPTTNDADKYFYEKGIDIIPDVLANGGGVVVSYYEWVQNKA SFYWTEEEVNERLTKNMQNSFEAVWEMQHKYNVPPRQAAYMVALERLVVETRWRGYNC >gi|292596538|gb|ADCV01000010.1| GENE 2 1701 - 3161 792 486 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 5 443 3 445 456 309 37 1e-83 MEAMLNDAISTINGYLWSYFIIFILIGAGLFFTMTTNFVQIRMIKEMIRLVINGAGSSTE KNHVSSFQAFCVSTASRVGVGNIAGIAIAVVLGGPGAIFWMWVIALIGAATGFIESTLAQ IYKEPVAKGGFYGGPAYYIRYGLNNKALSVLFAILISITYGWIYNSVQANTLAASLQVFN LDVSYTGAVVAVLLGIIIFGGINRVAKASEIIVPIMAILYIATALFVVIMNITQFPHVIY TIFSSAFEPVAAGGGLLGATVMNGIKRGLFSNEAGEGSVPNAAATAAVNHPVEQGLVQAF GVFLDTFIICTASAFIVLIVGDYSTTGLTGIALVQHNLAQQLGSWAPTAVAIFIVMFSFS SLIGNYYYGEINISHLTNKRFYLHLFRIGVILMTFVGSIASLDLVWNLADLFMAFLVLTN VSSIVRMGRTAGLALDDYIKQRKAGIETPVFNRSILNHTYGIVWWGDGQTTDSSVPPTPI EDTVEK >gi|292596538|gb|ADCV01000010.1| GENE 3 3302 - 3994 979 230 aa, chain - ## HITS:1 COG:BS_ydhC KEGG:ns NR:ns ## COG: BS_ydhC COG1802 # Protein_GI_number: 16077637 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 9 226 5 223 224 104 30.0 1e-22 MTKRLQPIRLDAYKPLREVVSETLRQAIQDGVLKPGERLMEIPLAEELGVSRTPIREAIR KLELEGFVVMVPRRGTYVANISLKDITQVFEIRSALEELAAGLAAERITEEEIETLERML VEIGDHMENKNMESVVAADVEFHEVLYRASRNERLADIVHNLREQTYRFRSFSMNQPGRL RKTWEEHRQLVEAIASHNAAQARKLARIHMEHSEQTLLQGMEESQEFTKA >gi|292596538|gb|ADCV01000010.1| GENE 4 3991 - 4887 867 298 aa, chain - ## HITS:1 COG:BH0061 KEGG:ns NR:ns ## COG: BH0061 COG1947 # Protein_GI_number: 15612624 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus halodurans # 11 282 9 274 287 157 34.0 3e-38 MSKSFEQLGCSKINIGLAITGKRDDGYHDIDSIFQSIRLSDSIYFAKHHSVVFSGGAPEL PDYMQKLVSYGEDNLALKALRAIQAYTGCKAGAAIHLLKRVPIQAGLGGGSADAAAMLLG LNRFWDLRLTQEELLNIGASLGSDVPFLLQGGTARGTGRGEVLTYSQSPEAHWLLLVKPK VSISTAVAYGRFNGKSNATAKTIDTVLNHLQNNDLQSAFTSSANTFEELLFPDHEELGIC KEFFTNRGYPTIMTGSGPTMVVLLNKPMEALQLQEEIKAAGHDWLSLITKTCTQEDLV >gi|292596538|gb|ADCV01000010.1| GENE 5 5093 - 6049 799 318 aa, chain + ## HITS:1 COG:BH1678 KEGG:ns NR:ns ## COG: BH1678 COG1284 # Protein_GI_number: 15614241 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 4 280 6 280 290 156 31.0 5e-38 MFAKYKDVVYQCVIVAIGCAIFGAGLDAFVLPHKLVSTGISGVGLILYYLTGLSVGSWNV ILNVPIFWAAWKWLGKRVVLNTLYGTLMLSWMIDLFSFLQYDMIIKDPLLSSMMAGITTG LGLGIVYRVGGNTGGLDPIALIVRKYYGLQMGSINSAINCAILLVAVGVVGLEAVAVTLI SVYVYTIITNKVVIGFNQRKVAFIITYRTDEVCECIINKVGRGATIINGIGAYTRTPKQI VMVAVNLLQVNKLKEVIQEADPNVFILITDAQEVIGQGFTQPIVPAEISKQLKSKDRTTE ANNNVVIDIDENSCNKSK >gi|292596538|gb|ADCV01000010.1| GENE 6 6215 - 7852 1881 545 aa, chain + ## HITS:1 COG:Cgl2489 KEGG:ns NR:ns ## COG: Cgl2489 COG0033 # Protein_GI_number: 19553739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Corynebacterium glutamicum # 1 541 1 552 554 500 47.0 1e-141 MTHKLAGTPVQEQDIIDVQTLVDAYFDNAPDITDPTQLVSFGTSGHRGTSLNSTFTDLHV AAITQAICDGRGQFGATGPIFVGQDTHALSQPALVTVLEVLAGNGVTAMVDSDMDFVPTP SISRAIIRYNESHDDKADGIVITPSHNPPDNGGIKYNATNGGPADTLITKWIETRANEYV HAYCELEGFKRISIDNIEPDQQVPYDYKGLYVEELSSIINMEAIQSAKPKVLVNALGGSG LGYWRAIKERYNLNLDIINDEYDPTFSFMTYDHDGKVRMDCSSEYAMADVIKQIGNYDLA VGNDPDYDRYGIVSPYGLASPNAFLVTAADYLFTTRGWTNKGVGKTVVCTTMIDKWAASK EVPVYEVPVGFKYFSSLLFDGEIGIGGEESAGASFLKKDGTVWTTDKDGMVMALLAMEMY AVMGATVDRLYNNLVVGCGDPRFGRIDAPCTKAAKAKLKQLNASSITATEVDGDAITNVR TTSLYKDMPIDGVRVETETGWFVARPSGTEDLYKIYGESYKGDKGLIALLTAGEEIVTSA LSDEV >gi|292596538|gb|ADCV01000010.1| GENE 7 7987 - 8262 442 91 aa, chain + ## HITS:1 COG:MA3235 KEGG:ns NR:ns ## COG: MA3235 COG3830 # Protein_GI_number: 20092051 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanosarcina acetivorans str.C2A # 2 90 5 92 92 87 49.0 5e-18 MKLVVTVVGVDRVGIIAGVSTVLANYGVNIMSINQTILDGVFNMIMMCETKSEDMKNLTA IQEALTTQGKELGVEIRAQHADIFLSMHRVG >gi|292596538|gb|ADCV01000010.1| GENE 8 8271 - 9116 1084 281 aa, chain + ## HITS:1 COG:lin0538 KEGG:ns NR:ns ## COG: lin0538 COG2848 # Protein_GI_number: 16799613 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 2 269 1 268 451 330 65.0 2e-90 MLSIDNILETNQMIHDNKLDVRTITMGISLLECASSSGKELCDRIYDRITKEAEHLVSTG EDIEREFGIPIINKRISVTPISLVAGGSDLTSYVPVAEAMDRAAKTVGVNFIGGFSALVT KGATRADRILIDSIPEALATTDIVCSSVAVGSTKTGINMDAVRDMGIIVKKTAELTKDND ALGCAKLVIFCNPVEDNPFMAGAFFGVTEGDSAISVGVSGPGVVKHALESVRGQSFDVVA ETVKRTAFKITRVGQLVAQEASRRLGKPFVLLIYLWRQRQL >gi|292596538|gb|ADCV01000010.1| GENE 9 9095 - 9628 667 177 aa, chain + ## HITS:1 COG:MJ1665 KEGG:ns NR:ns ## COG: MJ1665 COG2848 # Protein_GI_number: 15669861 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanococcus jannaschii # 1 177 282 458 458 261 75.0 3e-70 MAPTPAVGDSVAHVLEEMGLSSCGCHGTTAALALLNDAVKKGGLMASSHVGGLSGAFIPV SEDAGMIDAVSCGSLTLDKLEAMTCVCSVGLDMIAIPGDTTADTISAIIADESAIGMINN KTTAVRVIPVPGKTVGEVVEFGGLLGYAPIIEVSPYSAAEFIARGGRIPAPIRSLTN >gi|292596538|gb|ADCV01000010.1| GENE 10 9663 - 10814 1325 383 aa, chain + ## HITS:1 COG:BS_tagO KEGG:ns NR:ns ## COG: BS_tagO COG0472 # Protein_GI_number: 16080606 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Bacillus subtilis # 1 316 2 317 358 252 41.0 9e-67 MSEYVLDYVWAFALALIITFALTPLVKRFAVAVGAIDKPDARKVHHGAIPRLGGLAIFLG YVGSVLFNDSIPHDHKLFGFVLGTVILVLVGIWDDIKQIEPKTKLMGQIIAAAILVAYDI RVDFINLPWGGVVYLKYWAIPLTIFWIVGFTNIVNLIDGLDGLAAGISFIACIAVCAMTL QLGQTDLACISLALAGATVGFLRYNFNPAKIFMGDTGSMLLGYTLAAISVMGAVKTAAMI ALVVPAIVLGLPILDTLFAIVRRKISGRPIFKPDKGHVHHRLLAQGLTQKQAVLLMYAVT ALFGGVSVIVAEVNAWVGATLVLVIFLCSIYIARRLGVIMHSDAAGHPLPRPTIERSDSD DTISFDRDELAKALENTDDSHKE >gi|292596538|gb|ADCV01000010.1| GENE 11 10821 - 12014 1626 397 aa, chain + ## HITS:1 COG:TM1034 KEGG:ns NR:ns ## COG: TM1034 COG0381 # Protein_GI_number: 15643792 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Thermotoga maritima # 18 395 1 377 378 440 58.0 1e-123 MGRLAPHFFYPTTLEATMLKVMTIFGTRPEAIKMAPLVKALQAAPDMEPIVTVTAQHRDM LDQVLNLFNITPDYDLNIMSQGQTLYDVTNRALMGLKDVLEEAKPDVVLVHGDTTTTFAG ALASFYQEIPVGHVEAGLRTGDIYSPFPEEMNRKLTGSIATYHFAPTSSSESNLKKENIN TEHLYVTGNTVIDALDTTVQDSYVFDDAAINALDPKKRTVLVTTHRRENLGEPMRHVYQA IRDLINEFEDIQVVFPVHKNPKVRQVVQEELGSVERVTLIDPLDYEPFANLMAKSYLILT DSGGIQEEAPALGKPVLVLRDTTERPEAVEAGTVRLVGTDKDAVHKAAYELLSNTEAYKL MSNSVNPYGDGKASERIIQALRHEFLGDARRPERFGK >gi|292596538|gb|ADCV01000010.1| GENE 12 12016 - 12210 102 64 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1540 NR:ns ## KEGG: Vpar_1540 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 64 1 64 64 112 100.0 4e-24 MDKDLVKALAMATSAGVTLVSCIGGFIWLGYKLDTWLQTEPLCMVIFGLIGAITGFYMLY KQVK >gi|292596538|gb|ADCV01000010.1| GENE 13 12353 - 12589 207 78 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1539 NR:ns ## KEGG: Vpar_1539 # Name: not_defined # Def: ATP synthase I # Organism: V.parvula # Pathway: not_defined # 1 78 45 122 122 108 80.0 8e-23 MVLYLLSLALHGQAIILGDPYKAVRKARRQMVWRLMLVGSLVVLGLKIPHVEAISMFVAI ALIQPALYIVYWRFSGRF >gi|292596538|gb|ADCV01000010.1| GENE 14 12835 - 13527 566 230 aa, chain + ## HITS:1 COG:all0010 KEGG:ns NR:ns ## COG: all0010 COG0356 # Protein_GI_number: 17227506 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Nostoc sp. PCC 7120 # 8 226 14 239 251 117 38.0 2e-26 MEGVENVELHAGHHEVVQWLGLTFNMDTLIATWVTMAIVILITVLATRGRKLVPVGLQNI VESILEGLEGQLAPNLGRHWPMVSSLLFTFFLFIFVGNELGLMPTFKALTSPTSDINTTI ALALCSTLVVWVMGVKVKGLSYFKHFVRPYKALLILNIFEEIARPVTLAFRLFGNIVAGE ILLEVLYNLPWFVPVPWVWIAFSLFIGIIQAFIFTVLTASYLGMGLSEEH >gi|292596538|gb|ADCV01000010.1| GENE 15 13551 - 13778 506 75 aa, chain + ## HITS:1 COG:SA1910 KEGG:ns NR:ns ## COG: SA1910 COG0636 # Protein_GI_number: 15927682 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Staphylococcus aureus N315 # 9 71 4 66 70 62 63.0 2e-10 MEAQGLFALAAAIAVGCGAIGAGIGDGLVSSKVIEGITRQPELRGQLMSTMFVAIGLIEA MPIIGVVVAFILLFR >gi|292596538|gb|ADCV01000010.1| GENE 16 13797 - 14294 708 165 aa, chain + ## HITS:1 COG:lin2677 KEGG:ns NR:ns ## COG: lin2677 COG0711 # Protein_GI_number: 16801738 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Listeria innocua # 4 158 12 166 170 90 37.0 9e-19 MVDLSLGTILAQMLNFFILVWLLARFAYKPLLAIMTERKERIAKDLEAAEQARAEAEGFK ADYAAQIANARIEAQQIVEKAVQEAENTTREQLSTAREQIEQEKNRARQDIAIERDRAMN SLRNEVVSLSVAMAGKVVAKDMNSETNTKLIEDAIRQLDSKTIGL >gi|292596538|gb|ADCV01000010.1| GENE 17 14299 - 14850 668 183 aa, chain + ## HITS:1 COG:AGc4759 KEGG:ns NR:ns ## COG: AGc4759 COG0712 # Protein_GI_number: 15889880 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 176 13 184 188 89 31.0 4e-18 MSIEIVADKYSSAMFELAQEQNILELMEEQLGYVASVMAEQPELRSFLENPIVTEDAKIK LVGSIFESSIDKVALHFIYVMIKRGRHRYIAQAIAAFIQKSREARGILEATVTVAEPITA EVEASVQAKLREVTGKDVILSVRQDPSIMGGIVIQVGDKRIDGSVSRRLEELEKSLLRTN SIR >gi|292596538|gb|ADCV01000010.1| GENE 18 14867 - 16405 1834 512 aa, chain + ## HITS:1 COG:BH3756 KEGG:ns NR:ns ## COG: BH3756 COG0056 # Protein_GI_number: 15616318 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Bacillus halodurans # 1 503 1 501 502 662 67.0 0 MKMKPEEITAIIKQQIQDYDVDLNVDDVGTVLDVGDGIAHIYGLERAMAGELLELPHGVY GLVLNLELDNVGAVLLGDDFLIKEGDQVRRTGKIMDVPAGDALIGRVVNPLGQPLDGKGA IQATERRPIEHPAPGIADRQSVNEPLQTGLKAIDAMVPIGRGQRELIIGDRGTGKTAIAL DTILNQKGKDVICIYVAIGQKESTVARVVQKLEEAGAMEYTIVVSASASTGAPLQYIAPY AGVAMGEYFMYQGKHVLCVYDDLTKQAAAYRAMSLLLRRPPGREAYPGDVFYLHSRLLER AAKLSSELGGGSITALPIIETQAGDVSAYIPTNVISITDGQIFLGTDMFYSGIRPAVDVG LSVSRVGGSAQTKAMKQVAGQLRLDLAQYRELAAFAQFGSDLDAATRAQLDRGERLTEML KQGQYEPMSVAEMVINLYAGTKGYLADIQVADVLSFEAELLRYVKANYPEIITNIETSKK IDEETENLLKQAIPECVEAFGSTHTLVSRKEA >gi|292596538|gb|ADCV01000010.1| GENE 19 16409 - 17263 957 284 aa, chain + ## HITS:1 COG:BH3755 KEGG:ns NR:ns ## COG: BH3755 COG0224 # Protein_GI_number: 15616317 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Bacillus halodurans # 1 284 1 285 285 215 41.0 6e-56 MASAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQTKAEATRPYAEKIGQILRHMSNSD LEGFESPLLDVRPVERTCYIVVGADKGLAGAFSSNVLKFAMEQLHGKSPDTYRVITAGRK PRDSMKSRGIRIDKSYAGFSDKPSYEHARAIMHEALSLYERHEVDEVIMIYTRFVNSMTQ IAQAERLLPIEQPQDEVKGEEYDFMPSAVSVLEALLPKYLEITVYNGLLQSAASELGARM TAMTSATDNAGELIESLGLEYNKLRQSSITNEISEIVGGANALQ >gi|292596538|gb|ADCV01000010.1| GENE 20 17282 - 18706 2154 474 aa, chain + ## HITS:1 COG:all5039 KEGG:ns NR:ns ## COG: all5039 COG0055 # Protein_GI_number: 17232531 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Nostoc sp. PCC 7120 # 4 470 9 481 482 668 71.0 0 MSNNIGKVVQVIGPVVDVRFDAGHLPAIYNAIHIYHDHKAHDRQKIVVEVMQHLGDDTVR CVAMSSTDGMTRNMEAEDTGAPISVPVGEGVLGRIFNVLGETVDHDPAPVVADEKWPIHR PAPKFDDLSPDTQILETGIKVVDLIAPYVKGGKIGLFGGAGVGKTVLIMELIHNVATEHG GYSVFSGVGERTREGNDLWNEMKESGVINKTALVYGQMNEPPGARMRVGLTGLTMAEYFR DVKKQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLANDVGALQERITSTKEGSI TSVQAVYVPADDLTDPAPAATFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPHVLG EEHYAVARGVQEVLQKYRDLQDIIAILGMEELSDEDKLTVSRARKIQRFLSQPFFVAEVF TGSPGKYVPLSETLRGFREILDGKHDELPEGAFYMVGTIDEAIQKAKEMQEKGE >gi|292596538|gb|ADCV01000010.1| GENE 21 18710 - 19117 507 135 aa, chain + ## HITS:1 COG:BH3753 KEGG:ns NR:ns ## COG: BH3753 COG0355 # Protein_GI_number: 15616315 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Bacillus halodurans # 5 131 4 130 133 87 40.0 5e-18 MAEPMTLQIITPDAIVFEGQSTFFVGKAIDGGFGILPNHAPMIIALDLAPLRIEQPDGTS REYAVFGGFCEIEHNKVSIVTPDCQDPTSIDVERARRAKERAEGRLSNPTPDIDVERAEA ALQRALLRLHVTKML >gi|292596538|gb|ADCV01000010.1| GENE 22 19165 - 20073 955 302 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1530 NR:ns ## KEGG: Vpar_1530 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 302 1 302 302 475 98.0 1e-133 MLHNFGLYKRPLLTVLAVLLTTAFTTASAAMIDLSQLTPNTTQPVVLSTIQSNTSNEAST LTPKTNMEPVIKVAATPTSTPISGVSEKATINATSTSHDGLLENFPSRKVTIVVPANLRN ENTAQFGHYMTDRLSNTLKYPYYDTTIVSTNTPTAEIKAADLAQIAEAQNSEIVIMPVPL QDVYVQVNTINSPDPYNKDNHEIYIAAKVNALLYYYDVNDKVIHTVRTGFNQTDDSLTMP THKSVWNKVMTILLDKLPYKRIPTDRDRYQAPGINSEAPVVLDFQVEQPKNTAYSLKGVS VL >gi|292596538|gb|ADCV01000010.1| GENE 23 21159 - 22001 516 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 4 280 5 287 508 203 41 7e-92 MREIQVSEITKTVRQMCMDAAYHLPKDIYEGLKKGRETEESSVGRIVLDQIIKNAEIADA EDRPYCQDTGMTMVFLKVGQDVHFVGGDLTEAINAGVAAGYVEGYLRKSVVAEPLFNRKN TQNNTPAIIYTEIVPGDKVDIQVELKGFGSENKSDVAMLVPADGVEGVKNAVLEIVKHAG PNPCPPIVLGIGIGGTMDQAAVMSKKALLRDISVPHKDADYAKLEEEIMEMVNKTGIGPQ LGGTTTCIGVNIEWGATHIAGLPVAVTIMCHAARHAHVVL >gi|292596538|gb|ADCV01000010.1| GENE 24 22021 - 22581 394 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 2 181 311 491 508 156 41 7e-92 MAESIRINTEEYNEEFSRKLKVGDSVLITGKIYSARDAAHKVMTEALARGEKLPIDWTNK FVYYLGPTPAKPGDPIGSAGPTTSGRMDAYTPTMLDQGIKGMIGKGSRKPEVVESMKKNG CTYFAAVGGAAALIAKSIKKYEVLAYGELGPEALAELTVEDFPCIVVGDTEGNNFYELGQ KPYRKI >gi|292596538|gb|ADCV01000010.1| GENE 25 22753 - 23304 642 183 aa, chain + ## HITS:1 COG:BS_ywlG KEGG:ns NR:ns ## COG: BS_ywlG COG4475 # Protein_GI_number: 16080744 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 7 178 4 177 180 173 49.0 2e-43 MTSVETIRQSTRNAMAELLDLAKVREGQLFVVGCSTSEIVGKKIGTDSHLDVAQVVFDEI YNAVKAKGLNLAIQCCEHINRALVMERSAMTWEEEVNVVPQRHAGGALAVMAYEYFDDPV MVEFIQADVGIDIGDTFIGMHMKHVAVPVRLCVKEIGKAHVTACRVRPKSIGGERAVYNE ALM >gi|292596538|gb|ADCV01000010.1| GENE 26 23314 - 25077 1418 587 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1526 NR:ns ## KEGG: Vpar_1526 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 587 1 579 579 1121 97.0 0 MSNLIPYFVLAVVALGFFAVCYAVFSGGDGESKAKEKSYKNISNKNNPKAHNDVIFATES QEGNVTITHTSGTNVYTASIPDTVETVVGEEREPAEPLVDPIDTSYNKRSTLKSNSSHVS EGEYALALGSDNGTPIGSDNGTPIGDETIVMTAVSDLKQANQANQGVTPLVDKTIVLDVV TDELLNSANSVEDTIAMGESVEAFEADEADSIDATQMIGGANEIQTAEGPSVLDETRLFD ASEIEAQLAATSLAEEEEPHGQWAKTAHEDKCVELAIAPFVHSFGVLHGDTQHYVESITR DALAALNITKIVEVNALLENIVIQEALMSMQKAYAATNTEWMKSAALGAFLDVVQSPKSS TPYLVAFDALRVLPHLTLGHFQVMALTLLLQYSRNSNNYGLIHFQHYVEKYIEPFISDLP RNDSFYRQLDYLRCTQEEQEPITLCQVLSNSYPFVFNYRGFSKEELFRATDGHGVDPRYV VRSLNSNLYKLALVDESLAPQFFRQTRISNAMVQRDLLALMKSKPTAFRGQEARDIMDDI SPVLLDLADVFDSTPMSKISLTLLGLYLGRAHVKATIGEEFDLSHWF >gi|292596538|gb|ADCV01000010.1| GENE 27 25234 - 25959 678 241 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 14 235 6 223 229 119 31.0 7e-27 MKQILSNDIINQYMPTLVKCPLFNTLGEPELRSYLNNAKVIIHSYQKNDFIALAGDPMEG IGVILEGSALLTRENVMGQRVIMANLEQSDIFGEALLFSKQPLWPATIKATKATKIMFIP LETFIKTLPDCHQCQTKILSNLLEDLSEKAILLTRKVHYLTLKGMREKIFAYLTDIYKRQ HSNTIQLPHNREQMAEVLNVSRTALSRELGRLRDEGLIDITGRTVTIKNIEDIEEFGFNT F >gi|292596538|gb|ADCV01000010.1| GENE 28 26232 - 27797 1917 521 aa, chain + ## HITS:1 COG:MJ0765 KEGG:ns NR:ns ## COG: MJ0765 COG1151 # Protein_GI_number: 15668946 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Methanococcus jannaschii # 3 521 10 548 548 468 44.0 1e-131 MSMFCYQCEQSAAPGGCTVQGVCGKTAPVANLQDELTAALVGLARALDVKGHTKEGIDYI MRGLFMCVTNVNFSEDRVQEFIDEVNAYHAKVDSAQQNFDWEQLWKGEEDIVSLRSTLLL GMRGMAAYAWHAARLGFHDADVDAWFVKGMVEFAKDHSAEEWLDLLMEFGQINLKCMAVL DKANTETYGTPVPTTVPLTVEPGPFIVVTGHDLHDLKQLLEQTDGKGVNIYTHGEMLPCH AYPELKKHPQLKGNFGTAWQNQQKEFVDVPGAFLFTTNCIMPPKENYKANIFTTDMVGFD GCAHIEEKEDGTKDFSAVINRAIELGGYKEAQEFTGINGGHEVTTGFGHGTVLGIADKVI DAVKAGAIKHFFLVGGCDGAKVGRNYYTEFVKQTPNDTVVLTLACGKFRFNDMNIGEIGG IPRILDMGQCNDAYSAIQVAVALAGAFECDVNDLPLTLVLSWYEQKAVCILLTLLALGIR NIYIGPSLPKFFSSNVLNILVDKFQLHPITTPEADMKAILG >gi|292596538|gb|ADCV01000010.1| GENE 29 28323 - 29012 808 229 aa, chain + ## HITS:1 COG:lin1927 KEGG:ns NR:ns ## COG: lin1927 COG1760 # Protein_GI_number: 16800993 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Listeria innocua # 11 225 4 217 220 197 46.0 1e-50 MVYVYIEVCMNSIFDIIGPIMIGPSSSHTAGAARLGKMARCIFRSTPKKVDLTLYGSFAK TYKGHGTDRALIGGLLGYKEDDANIRVAHELAKKEGMEFSFIESPLDVGHPNVVRFDMYD EHNRHMTVIGRSLGGGQIMITEVDGNDMSITGDEFTLVVFHEDRPGAISLVSQALSESDI NIATMRVFRKGKHKDAVMVITTDTVVNPITVQFMREFPGIQDVMTFEAL >gi|292596538|gb|ADCV01000010.1| GENE 30 29024 - 29896 1105 290 aa, chain + ## HITS:1 COG:BH2496 KEGG:ns NR:ns ## COG: BH2496 COG1760 # Protein_GI_number: 15615059 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Bacillus halodurans # 5 287 2 287 295 224 43.0 2e-58 MSYAYDTIADIIRLGEENNISFGDVVLRYELENYDRSEDAVVREIENRLDIFESSIQDGI AYAEKTASGMSGGQAAQLNGQTPRFMSDIAYKAMTYAIAVNEANAKMFRIVACPTAGSCG VMPGAVKAVADHYQLDRATVVKGFLAASGIGNVVANRACVAGAVGGCQAEIGTAACMAAG AIVEMMSGSPRQVGHAIALCMKNLLGLACDPVAGLVEVPCVKRNGFYAVHAITASEMALM NIESQIPPDEVIEAMNNIGRAMPAALRETSDGGLAVTPTGTAIAERVQSL >gi|292596538|gb|ADCV01000010.1| GENE 31 29969 - 31384 1501 471 aa, chain + ## HITS:1 COG:FN0243 KEGG:ns NR:ns ## COG: FN0243 COG0617 # Protein_GI_number: 19703588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Fusobacterium nucleatum # 7 352 16 347 451 189 33.0 1e-47 MEQANRILTVLEEAGHEAYIIGGAVRDILMHQKPHDFDIVTSARPDTVIEVLRSHDIQTT DLVGKSFGVVVATLEGRQYEIATYRTERYGADSHRPEEIIYADTLEEDVLRRDFTVNGMA MNRFGEVIDLVGGRRDIKHKTLRTIGNAQERFEEDALRLFRACRFVAKLDFLPTEDLLEA MPKAFHRVPGLSLERVRSELDRLMLEPAVAKGLDVLVQSRLAECSCRVVENGVAHEVPIL PELYHLVNLPQEKDFHEFDGWYHTLAVVSHTEPDLTLRWGALLHDVAKGMPTVRAVVNGR LTDRGHDTLGAEMTETLLTRLGYPKSFVRRVAWIVKNHMRFHYFVQNGEANEKKWIRKEA RSGEFRDSQIMRIAWEQLSKVCAADVLGCGKPYASTDGTLAFGECMADLSLEMPIHTKDL NYDERVIKLAGKKVGEGLQYLLGQVQNGVIPNEPDALYDALDHKLRRPVEK >gi|292596538|gb|ADCV01000010.1| GENE 32 31414 - 33351 1996 645 aa, chain + ## HITS:1 COG:CAC2130 KEGG:ns NR:ns ## COG: CAC2130 COG0768 # Protein_GI_number: 15895399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 13 641 22 721 729 348 33.0 2e-95 MSDWSRTTWCLAILMTVAFVLIGRLAQLQVFDTFDLEKKNLLQVQVDRKLQSPRGTIYDR NGKPLAMSVVTKSLYADPKMIKQSPQEIAELISPYVTMSKENIVKALQEDTAFVWLNRMM DADKSKAVQQVIKDNNIAGLNFVEESKRYYPNGVLAAQVLGFVGTDDKGLDGLEMVLDDE LKGGVQQEIVATDNKGNAIFGSVLSKFLPDKGKSVTLTIDATIQFIAERALDKAMVDTGA KHASVIVMDPKNGEILAMANRPSYDPNNYNQSGEEAFKNIAVTNLYEPGSTFKPIIASAA LAAGKWKLDTVYNDKGAFAANGHIIRNWNGEGYGPVRLLDILKYSINTGMAEIGTLTGAD ILSKYIRDYGFGSETGIELPGEGAGILYNPEDMSKLDVATMSIGQGIAVTPLQMVRAFGA LSNGGAMMKPHIIKSYSNSQGDVTSTTETSVVGQPVPAETAKTIVDILEKEVSEGGGTKA MVEGYHFGGKTGTAQKLDTKHGGYLDGQYIASFIGFGPVEDPKFVVLVVIDDPQKGSYYG SQIVAPVFKDIVSQLVRYYQMSPYVKESTPVAVKAANTLPEPKPGSDGSVTLPNFTGFTY GEVRDWLHKAGLAFKPDGTGTATSQDESSGTTVQAGTAITVHFRR >gi|292596538|gb|ADCV01000010.1| GENE 33 33470 - 34297 1025 275 aa, chain + ## HITS:1 COG:BH2784 KEGG:ns NR:ns ## COG: BH2784 COG0190 # Protein_GI_number: 15615347 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus halodurans # 4 272 6 276 279 234 45.0 1e-61 MIELRGKAVADAHKAILQEKVAAVGDSVITMAVLLVGEDHGAHMYATFMEKTAKNFGYGF VLKQLPETTTQDEVVAALHELNTDPSIHGILPLMPMPKHIDTEALIDMLDPKKDIDGLTT YNIGLVTAGKGGFAPCTAKACMAILNHYNIPLEGKHVVVVGRSQVIGKPVALMALAAHGT VTMCHSRTSDLVEQVKRGDIIIAAAGRAHMITANMIKPGAVVIDVGINELDGKTVGDVDY DAVKDIASAITPVPGGVGSVTTTMMLEAVYEAYHA >gi|292596538|gb|ADCV01000010.1| GENE 34 34290 - 34631 291 113 aa, chain + ## HITS:1 COG:slr1675 KEGG:ns NR:ns ## COG: slr1675 COG0375 # Protein_GI_number: 16330949 # Func_class: R General function prediction only # Function: Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) # Organism: Synechocystis # 1 112 1 112 113 77 32.0 4e-15 MHEMSIAEGILDVALDTLRQHDATVIHSIQLDLGLMSGVEPDSLLFCWEAITKGTPAEGS RIEINTVPIEGKCLDCDKIFFVKNYTFICPYCDSHFVQTIGGRELQVTSIDID >gi|292596538|gb|ADCV01000010.1| GENE 35 34647 - 35300 579 217 aa, chain + ## HITS:1 COG:hypB KEGG:ns NR:ns ## COG: hypB COG0378 # Protein_GI_number: 16130634 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Escherichia coli K12 # 3 212 78 287 290 223 52.0 2e-58 MQVQVKTNVLAKNDAIAESLQQLFKEKNIFVFNLLGSPGAGKTSLLEATLQDLKKDYRLA VIEGDLFTAKDAKRIHELGVPVIQINTVGGCHLDAQMIQDALGDLNLDDLDMIIIENVGN LVCPAEFEIGESMKVTILSVTEGEDKPLKYPLIFKESKAILINKIDLLPYVPFKKEQAIQ DIRNLNPNGEIFEVSCTAHNGLETWLNWLRAQLENNR >gi|292596538|gb|ADCV01000010.1| GENE 36 35297 - 36718 1445 473 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1516 NR:ns ## KEGG: Vpar_1516 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 473 1 473 473 919 99.0 0 MNYSMKSRIVAALLVGLCATTISYAAEPAISTVNPVAVETTDDTNVVAQDSANASNDGSV DGTGEVDSLSYLDNAPVRVVKLDPKTKQEGSKTGWLAEQMAVTEFGDSIQFWQAASENEG PLPSITQNNLADIGKSYTANSLPPLGSQDDYAIGTYRLGNQFEVPKDVEKTEVRDNFTTY YMKDVAVTVYTGPAQELLVNNQLRGQGATYFFEPNTITNIHSTKKGANTVRDIGPGSTRM ELIFAYGSPNAMWRDKKNETYIFLYEGHSENSLPQKKEFKSPVENTNSNSQQQSMLGQQK EYIAFTIKQSNIEAVDIISGQVWPRFGLPKAEVYDFEAGTLTADDFVLRGFKLNDHFVND PNNDWKHQGILFGSTFIGYNEYGVSVDKKDLINRVLLNVYTPTRRGIAMGDTKYLLLFVY GMPTRIVESTTKAGTSTVYEYKNPAASNSYLQFALDDKNQYIKSVMLSDRPVK >gi|292596538|gb|ADCV01000010.1| GENE 37 36747 - 37211 633 154 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1515 NR:ns ## KEGG: Vpar_1515 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 154 1 154 154 304 100.0 8e-82 MVTVQDVKERWEKIQGDDERILFIVGGPGSGKSLLIRELSEQKGWKYLEAKQLIEEEFLL VPRDERPQLAEEVICRALSRSDTEVVLLDGINVFFAPILNLKPFELLKTISKKYPIVVGW RGHIEGDQLYLEHNNNPKHAVVSIAHPDHVIAID >gi|292596538|gb|ADCV01000010.1| GENE 38 38279 - 38533 331 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 85 1 85 407 132 71 4e-30 MAKEKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLAEKGQADFQDYSMIDKAPEERERG ITINTAHVEYETANRHYAHVDCPGH Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:08:43 2011 Seq name: gi|292596537|gb|ADCV01000011.1| Veillonella sp. 3_1_44 cont1.11, whole genome shotgun sequence Length of sequence - 24954 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 9, operones - 4 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 333 453 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 346 - 380 4.0 + Prom 414 - 473 7.5 2 2 Tu 1 . + CDS 669 - 2906 2196 ## COG3256 Nitric oxide reductase large subunit + Term 2982 - 3032 10.0 + Prom 2924 - 2983 7.7 3 3 Op 1 . + CDS 3177 - 3326 225 ## PROTEIN SUPPORTED gi|188588131|ref|YP_001919658.1| ribosomal protein L33 4 3 Op 2 . + CDS 3370 - 3591 233 ## Vpar_1511 preprotein translocase, SecE subunit 5 3 Op 3 45/0.000 + CDS 3604 - 4140 730 ## COG0250 Transcription antiterminator + Prom 4166 - 4225 2.5 6 3 Op 4 55/0.000 + CDS 4250 - 4675 699 ## PROTEIN SUPPORTED gi|227372933|ref|ZP_03856410.1| LSU ribosomal protein L11P 7 3 Op 5 43/0.000 + CDS 4752 - 5462 1187 ## PROTEIN SUPPORTED gi|227372934|ref|ZP_03856411.1| LSU ribosomal protein L1P + Term 5556 - 5595 8.2 + Prom 5544 - 5603 3.4 8 4 Op 1 47/0.000 + CDS 5638 - 6135 784 ## PROTEIN SUPPORTED gi|227372935|ref|ZP_03856412.1| LSU ribosomal protein L10P 9 4 Op 2 . + CDS 6206 - 6574 566 ## PROTEIN SUPPORTED gi|227372936|ref|ZP_03856413.1| LSU ribosomal protein L12P + Term 6591 - 6623 6.3 - Term 6579 - 6611 6.3 10 5 Tu 1 . - CDS 6616 - 8256 981 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - Prom 8398 - 8457 11.1 + Prom 8371 - 8430 7.5 11 6 Tu 1 . + CDS 8551 - 9966 2021 ## COG1027 Aspartate ammonia-lyase + Term 10007 - 10053 12.1 + Prom 10005 - 10064 5.7 12 7 Op 1 58/0.000 + CDS 10297 - 14463 2242 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 13 7 Op 2 . + CDS 14493 - 18695 5699 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 18767 - 18812 10.4 - Term 18755 - 18803 9.8 14 8 Tu 1 . - CDS 18956 - 20977 2081 ## COG1292 Choline-glycine betaine transporter - Prom 21031 - 21090 9.0 + Prom 21113 - 21172 9.5 15 9 Op 1 . + CDS 21333 - 21578 202 ## PROTEIN SUPPORTED gi|121534753|ref|ZP_01666574.1| ribosomal protein L7Ae/L30e/S12e/Gadd45 16 9 Op 2 56/0.000 + CDS 21655 - 22029 623 ## PROTEIN SUPPORTED gi|227372943|ref|ZP_03856420.1| SSU ribosomal protein S12P 17 9 Op 3 51/0.000 + CDS 22082 - 22552 809 ## PROTEIN SUPPORTED gi|227372944|ref|ZP_03856421.1| SSU ribosomal protein S7P 18 9 Op 4 30/0.000 + CDS 22568 - 24643 3146 ## COG0480 Translation elongation factors (GTPases) 19 9 Op 5 . + CDS 24694 - 24954 341 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|292596537|gb|ADCV01000011.1| GENE 1 1 - 333 453 110 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 2 108 299 405 407 179 77 2e-44 KDIERGQVLAKPGSINPHTKFKAEVYVLTKEEGGRHTPFFSNYRPQFYFRTTDVTGVVNL PEGVEMCMPGDNVTMEIELITPIAIEEGLRFAIREGGHTVGAGVVTEIEG >gi|292596537|gb|ADCV01000011.1| GENE 2 669 - 2906 2196 745 aa, chain + ## HITS:1 COG:NMA1886 KEGG:ns NR:ns ## COG: NMA1886 COG3256 # Protein_GI_number: 15794774 # Func_class: P Inorganic ion transport and metabolism # Function: Nitric oxide reductase large subunit # Organism: Neisseria meningitidis Z2491 # 1 745 1 751 751 812 56.0 0 MGEYKKYWIAVVAVLIIGFSILGYLGTDVYHQAPPVPTAYVSQDGQVLFTKDDILHGQSA WQSTGGQSVGTVLGHGAYQAPDWTADWLHKEVSVMLDIKSQEAFGVLYEQLGDVQKAAVK EAVKAEYFNSAVREDGTVVLSPERITAMNLTGQYFIELYGDNPKLSETRDHFAMKDNTLP ELKDRIDMARFFFWTTWMASTQRPGTDATYTNNWPHEPLLDHNPTPESVAWSVVSVIILL CGIGIVVWMWAFGRKQDEHELTPPAEDPISKLHLTPSQRSLGKYLFTILALFLLQLGMGG IIAHYTVEGQAFYGIPLAQYFPYSIARTWHIQASLFWIAMAFLSAGLFLAPIINGGKDPK FQKLGVDILFWALVVLVVGSFTGTYLGVAHEIPASLNFYLGHQGYEFIELGRVWQWIEYI GILFWLVLMVRSIIGAFKNKGDKNLIAAFIFSVVMVGIFYGPGLFYGEHSHLAIMEYWRW WVIHLWVEGFFEVFSTTLMAFIFVTLGLVSYRAGTIAAISSGAIYLIGGIPGTFHHLYFT GVTSTIVATGASFSALEVVPLVLLGYEAFENYTRLHSAPWMHRLKWPVYCFIAVSFWNLV GAGIFGFLINMPVSLFYIQGLNTTAVHAHTALFGVYGFLSLGFVFLIARYIRPEVEFNDK LMKFGFWALNWGLALMVLISLLPIGLIQSWASVTQGLWLARSEDFMQQPLLQNLRWLRMV GDTIMILGALAFFWQIVKVTFTKKQ >gi|292596537|gb|ADCV01000011.1| GENE 3 3177 - 3326 225 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|188588131|ref|YP_001919658.1| ribosomal protein L33 [Clostridium botulinum E3 str. Alaska E43] # 1 49 1 49 49 91 79 6e-18 MRNAITLACTDCKQRNYQTNKNKKNNPDRIEMMKYCKFCGKHTLHRETK >gi|292596537|gb|ADCV01000011.1| GENE 4 3370 - 3591 233 73 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1511 NR:ns ## KEGG: Vpar_1511 # Name: not_defined # Def: preprotein translocase, SecE subunit # Organism: V.parvula # Pathway: Protein export [PATH:vpr03060]; Bacterial secretion system [PATH:vpr03070] # 1 73 1 73 73 124 100.0 1e-27 MAKSNSAVQQRGGFGKFFRGVKAELKKVVWPTKKELINYTIVVFLVTIFIALIISVLDGL FAQLFNTLLHFVG >gi|292596537|gb|ADCV01000011.1| GENE 5 3604 - 4140 730 178 aa, chain + ## HITS:1 COG:BH0118 KEGG:ns NR:ns ## COG: BH0118 COG0250 # Protein_GI_number: 15612681 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Bacillus halodurans # 4 176 2 177 178 181 54.0 5e-46 MEADKKWYVIHTYSGYENKVKTTLELKVQSMGLQDVISRILVPLEDEIDEKDGVKKVVKR KIFPGYVLVEMEVNDRSWYVVRNTPGVTGFVGSATKPVPLSDSEVEHILKSQGLDKKPTI NVDVEVGETVRITSGAFEDKLGVITELNPDKGTLKLSVEMFNRDTEVELEFSQVEKAL >gi|292596537|gb|ADCV01000011.1| GENE 6 4250 - 4675 699 141 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372933|ref|ZP_03856410.1| LSU ribosomal protein L11P [Veillonella parvula DSM 2008] # 1 141 1 141 141 273 100 6e-73 MAKKLVKQVKLQIEAAKATPAPPVGPALGQAGVNIVAFTKEFNERTAKQAGLIIPVVINV YEDRSFDFITKTPPAAVLLKKAAGIPKGSGVPNRDKVAKVGRDKVREIAELKMPDLNANT VEQGMRMVEGTARSMGIEIVD >gi|292596537|gb|ADCV01000011.1| GENE 7 4752 - 5462 1187 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372934|ref|ZP_03856411.1| LSU ribosomal protein L1P [Veillonella parvula DSM 2008] # 1 236 1 236 236 461 100 1e-129 MAKVGKKYAEAVKLIEAGKFYEPVEAIELVKKTATANFDETVEIAFNLNVDPKYADQQVR GAVVLPHGTGKTKRVLVFAKGDNIKAAEEAGADFVGSEELVAKIQGGWSDFDVVVATPDM MGQVGRLGKILGPKGLMPNPKVGTVTPDVARAVNEIKAGKIEYRTDKAGIISCSIGKASF DEEKLLDNYRTIVDTIIKAKPVAAKGQYIKSVTLSATMGPGVPLNVFKLSTVSKEQ >gi|292596537|gb|ADCV01000011.1| GENE 8 5638 - 6135 784 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372935|ref|ZP_03856412.1| LSU ribosomal protein L10P [Veillonella parvula DSM 2008] # 1 165 1 165 165 306 99 8e-83 MAVTESKKAIVAQMKETLSEAKGAVLIGYSGLTVAQATDLRRKMLAEGVEYKVIKNTLTR IAANELNLEGFSEHLEGPTALATSKDDAVAPARVIEQFIKATEKEVVTVKAGIVEGEVMD AAGVKAIASLPNREGMLSMLLSVLQAPVRNVAYAVKAVAEAKPAE >gi|292596537|gb|ADCV01000011.1| GENE 9 6206 - 6574 566 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372936|ref|ZP_03856413.1| LSU ribosomal protein L12P [Veillonella parvula DSM 2008] # 1 122 1 122 122 222 98 2e-57 MALNIENIVAELKEATILELNDLVKAIEEEFGVTAAAPVAVAAAGGAEGGTAKDSFDVIL KDAGASKINVIKVVREATGLGLKEAKAIVDGAPAPVKEGVAAEAAEALKAQLEEAGASVE LK >gi|292596537|gb|ADCV01000011.1| GENE 10 6616 - 8256 981 546 aa, chain - ## HITS:1 COG:all2870 KEGG:ns NR:ns ## COG: all2870 COG1807 # Protein_GI_number: 17230362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Nostoc sp. PCC 7120 # 12 335 33 412 641 110 23.0 9e-24 MINNHMLRIGALFLLTVLSYGFYNAYLPITDPVESNYVLSAITMLKHNSWISPMIYDHVW YDKPPLTYWALMITYKLFGISDFTSRIPNTLVAGASVALMYHIIYRISKNTFASVLCAIL LMSTLQFWYISHAIITDGFLLLFTLAIFGYSYLAFTNNDKSAMVKAYIAAALAVITKGPI GIILPGLILLIYVCARYIVHRKDESYQLSKDIKLLFNPLGLLAFIAIASPWYIAMYSIHG EQFISGFLGLHNVDRALISEHPKFNVWYYYLLIVPLSLLPWTPVIVYHLKDLNWKDDFDL LGIIWFIVIVLFYSLVATKYLTYTLPAIIPCIIWAAVKICELVTDKETGEFTQSFKKFNY LITLPLGIYYMIFTFATAFDQSLDSKPLIVGSFIIVCIILIGRYYITSFFKLAIYALVPL ITLYSVITITVPPILFNQSGLQFKAFIEDTSKPIYVYGSYYTSIVYYMDTTPTQVFVDTT DDSIWTEGKTLMPTITKETFLSNTSNNRGSYVIVPKKYDKDFSNALPYPKAKLVNKTKLA SIYKLQ >gi|292596537|gb|ADCV01000011.1| GENE 11 8551 - 9966 2021 471 aa, chain + ## HITS:1 COG:BH1426 KEGG:ns NR:ns ## COG: BH1426 COG1027 # Protein_GI_number: 15613989 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Bacillus halodurans # 2 466 5 469 471 530 57.0 1e-150 MRKEHDFLGELEVADELYYGVQTIRALENFHITGKHLDQDFIKALAMVKKASALANMKTG RLNVSIGKAIVQAADEVIAGEFADQFPVDPIQGGAGTSVNMNMNEVLANRACEILGHPKG SYDIVSPNNHCNMAQSTNDAFPTAIKVCAILKTKPLLEALQRLVDELEKKAEEYSEILKM GRTHLQDAVPITLGQEMGAYASGIRRGIKRIKSAVEGAHVINMGATAVGTGLNAEPNYIH DVAYELSEVVGEPFYTAENLIDATNNTDVFADISSGLKVTALVLIKMANDFRLMASGPRC GIGELKLPARQPGSSIMPGKVNPVIAEVLNQVCYQVIGNDLTITLAVENGQFELNVMEPV LAYNLFNNLCYLKNGVNTFVDKLLVDLEVDREQCEYWLNRSVGIVTALLPHLGYETASAL AKEAYETGRAIRDIILDQGLLTEDEINHILSPKEMTRPGIAGANLLKQKGN >gi|292596537|gb|ADCV01000011.1| GENE 12 10297 - 14463 2242 1388 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 367 1313 455 1391 1392 868 49 0.0 MFKPEQVGKRTRYTYAKINEVIKMPHLLDIQRKSYEWFLESGLQNIFNDISPIKDNSGNL VLSFEGFSLGEPKYDINECKNRDATYAAPLRVNIRLVNNDPENMDIKEQEVFMGDFPLMT DTGTFIINGAERVIVSQLVRSPGVYYNKEIDTMGNRLYDSTVIPNRGAWIELETDASEVV AVRIDRNRKLPATVLVRALGWDTNESILDLFWNGKTDEDGLPVYDERIVRTLEKDTTQSA DEALVEIYKKLRPGEPPTVESARNLFDNLFFDARRYDLARVGRYKLNKKLGWRQRMLGQT LAQPIVDPETGEIILDAGVQVGEEQLDIVANSHVFDGEGFAEFYIVNNDGVESKVICNNC NLPYDHRTVTREDMIANISYLLNLMDGAGHTDDIDHLGNRRLRCVGELLQNQFRIGLTRM ERVVRERMTIQETESITPQALINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLS ALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSNYAKVNEFGFIEAPY RKVEKVYGKGKDADKVVKVRVSDSVVYMTADEEEGMTIAQANSPLDAEGYFTTEHVACRR GHDVLEVTPDKVDYMDVSPKEVVSIGTAMIPFLENDDANRALMGANMQRQAVPLLRAQAP LVGTGMEYTAATDSGVCVLAREAGKVVRCWGNEIHVLRDSDGRVDTYHLNKFLRSNQSTC FNQKPIVNRGDHVVKGQVLADGPATDGGELALGYNVLVAFMPWEGYNYEDAILLSEELCK EDIYTSIHIEEYECDARDTKLGAEEITRELPNTGDDTLKNLDEDGIICIGAEVHPGDILV GKATPKGETELTPEERLLRAIFGDKEREVRDTSLRVPHGESGKVVDVKVFTRENGDELQP GVNKLVRVYIAQKRKIHEGDKMAGRHGNKGVVSRVMRKEDMPFLPDGTPVQIVLNPLGVP SRMNIGQVLETHLGWAVQGLGMKIKATDLHIQNVLKEARTDASYWEQIDTIRDLYAQIEV LEAKVAEDVTVNHFEENEQIIALKTKILKHVEAAAQKKLDAMGGEARYQELKAIEAKYNA LHVEFFDSEEEAPEMDPALVEELEAISKVKNTLNNIHSAEEKRVEIRKELESLGYDFDKY GMPKPDVAGIHIATPVFDGAHEKDVFETLAIAGRPDDGKTVLYDGRTGEPMDNRVTVGYV YMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEL LTVKSDDVVGRVKAYEKIVKGENIPEPGVPESFKVLLKELQSIGLDVKILNEDQEEVIMK ELEDEDEVVETGIEEVMEGSAVETDEVTVVEPEVEEEEEEDLPADNGGEDDILSQLAYPM GDSSNDED >gi|292596537|gb|ADCV01000011.1| GENE 13 14493 - 18695 5699 1400 aa, chain + ## HITS:1 COG:lin0286 KEGG:ns NR:ns ## COG: lin0286 COG0086 # Protein_GI_number: 16799363 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Listeria innocua # 1 1207 1 1177 1201 1048 47.0 0 MLDVNEFDSMRIGLASPEQILSWSHGEVKKPETINYRTLKPERDGLFCERIFGPTKDWEC HCGKYKRIRHKGVVCDKCGVEVTRAKVRRERMGHIQLATPVSHIWYFKGIPSRMGLILDI SPRSLERVLYFASYIVVDPAGTPLTKRQLLSEQEYREYEAQFNEDGYTIGGKSVVIETVA QRNERLAIVREAQRKERYNAALRDDATIPEADKEYEELTREERYELGAAEEVLFACIDMG AEAVKALLSELDLEALNAELREELNTASGQRKIRAVRRLEVVEAFRQSGNRPEWMIMDIV PVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEA VDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELK MHQCGLPKEMALELFKPFVMKRLVERGQASNIKAAKRQVERIGPGVWESLEEVIKEHPVL LNRAPTLHRLGIQAFEPILWEGRAIKLHPLVCTAFNADFDGDQMACHLPLSVEAQAEART LMLSSHNILSTKDGKPVAVPSQDMILGTYYLTVVREDTRDKAKTFATYDEVMLAYESHII GLQDILYIRLPDHGRVETTAGRLIFNNALFPELWQYEKREDGTYSLGKVMDKKTVGKLVD QCFQLFGNEKTAELLDRIKSLGYSFARRAGMTVAIADIKVPEVKTSLLDTAEQEVEKVSR MYRRGLITEEERYRKTIQLWTKATEDVTDAMMDNMACDKDGFNPVYMMAISGARGNKQQI RQLAGMRGLMADPSGRIIDLPIKANFKEGLTVLDYFTSSHGARKGLADTALRTADSGYLT RRLVDVSQDVIVREDDCDVVGIDLVRERARLATSPRQALELLKDKLIGRVLDKDVVNAET GELVVPAETILDEQCLADIAEAGVTSIALRGAHLGSDSDINHTNLVQKIILGESDDSIRA TLKETMVQNMLNKDTVQAIVDSEGVEIFPADTRLTEEGIEAILNSDVKEVQVRNNEIHGI EVEAIVEGTGVIEPLKDRIVGRIAAEELVNKETGEVIVPLNGEITEALADEVVKHYETVK IRSVLTCRSPYGVCRKCYGRDLGTGNQVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVA GDDITQGLPRVEELFEARKPKRNAIIAENEGTVRVVPNEGKKGTNTIFITGEDGIELDYL IPYGSRIIVKDGDVVSLGARLTEGSINPHDIMRVMGTEATQRYLVYEVQKVYKSQGVEIN DKHIEVIVRQMLHKVKIETAGDADMLPGDMVDVNTFDEENRRLTLNGRENATGKRTLLGI TKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLLGLKENVIIGKLIPAGTGMSRYRKI EVVKNTPEIIDITEEVMSED >gi|292596537|gb|ADCV01000011.1| GENE 14 18956 - 20977 2081 673 aa, chain - ## HITS:1 COG:HI1706 KEGG:ns NR:ns ## COG: HI1706 COG1292 # Protein_GI_number: 16273593 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Haemophilus influenzae # 5 673 1 669 669 754 56.0 0 MIKLIKRYSNFNPPVIIGSLSIVLGLSLCALLIPQISQTILQGIRDIIFEDFSWFYVLSI SLFFIFNIFLALSSLGDIKLGSDDEEAEFSYTAWLAMLFAAGTGVGLMFFGTAEPLSHYH SAVGLVDGAPSAKEALFRSIFHWGINAWTVYGIMALALAYFGFRYKLPLSLRSCFYPLWK DKINGPRGHIIDIIALCVTLLGIVTTLGFGAAQLGAGFLYIDIISTNDFSAQTVIIIIIM SIAVLSAVTGIDKGVKLLSEINISVALVLMLFVLCAGPTLLLLNTMVENFGYYLSHILGQ SFYTSIYTPETRPWFFSWTILFWAWWLSWAPFVGMFIARISKGRTIREFIFGVLIIPTVF TIVWFTIFGNTAIYIDETVANGALGALTDKPEQLLFAFLEYLPLSSLTSLLSIIVLALFF ITSADSGIYVLNNIAAYDKSTSSPKWQCLMWGSVMSFLAISLLSIGGLNVLQSVTLILAL PFAALMVIMCYSLWQGLLTDTQYFNTKLSTTSIYWDSKNWKQGLAKILNQTQSEDVISFM KTTALPAMYQLNKELTEEYGLTTRIDKHFNGNDASVELTIEKESMRNFTYGIKLVTQEVS DHLIEDPNIPHITESTNAIPMTYFSDGRAGYDAQYMTREDIITDIIRQYERYLTLSDDVG YDIMSHDAEETAE >gi|292596537|gb|ADCV01000011.1| GENE 15 21333 - 21578 202 81 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121534753|ref|ZP_01666574.1| ribosomal protein L7Ae/L30e/S12e/Gadd45 [Thermosinus carboxydivorans Nor1] # 1 80 1 80 81 82 48 3e-15 MDIAHLKSVNKTIGAKQTLKQIAKGAVKYVFLGCDSDERVVQPLRIACEEQGIPVNDKHT MDDLGRACRIKVRATAVGVLR >gi|292596537|gb|ADCV01000011.1| GENE 16 21655 - 22029 623 124 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372943|ref|ZP_03856420.1| SSU ribosomal protein S12P [Veillonella parvula DSM 2008] # 1 124 1 124 124 244 99 4e-64 MPTINQLVRKGRMSLTKKSTAPALQESPQKRGVCTRVYTATPKKPNSALRKVVRVRLTNA IEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVQNRMQSRSKYGAK KAKK >gi|292596537|gb|ADCV01000011.1| GENE 17 22082 - 22552 809 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372944|ref|ZP_03856421.1| SSU ribosomal protein S7P [Veillonella parvula DSM 2008] # 1 156 1 156 156 316 100 1e-85 MPRKGPVPKRDVLPDPVYNSKLVTRFINKVMYDGKKGIAETIVYDAFEIIRSKMGQDPME VFDQALKNVMPVLEVRARRIGGANYQVPVEVRADRRQTLGIRWVVNYARLRGERTMKERL AGELMDAFNNAGAAIKKKEDTHKMAEANKAFAHYRW >gi|292596537|gb|ADCV01000011.1| GENE 18 22568 - 24643 3146 691 aa, chain + ## HITS:1 COG:BH0131 KEGG:ns NR:ns ## COG: BH0131 COG0480 # Protein_GI_number: 15612694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Bacillus halodurans # 1 691 1 691 692 999 70.0 0 MAREFSLAKTRNIGIMAHIDAGKTTTTERILYYTGIVHKIGEVHEGAATMDWMEQEQERG ITITSAATTCQWKEHRINIIDTPGHVDFTVEVERSLRVLDGSVAVFSAKGGVEPQSETVW RQASNYGVPRIAYVNKMDTVGADFFNVVDMMKARLGANSVAIQVPIGAEDTFEGIIDLMT MKAEIYKSDDGKEYEITDIPAEYQEVAEARREMMIDAIAETDDDIMMKYLEGEEISVEEL KTALRKAVIANQLFPVLCGSSYKNKGVQMLLDAVIDYMPAPIDIPPIKGVVPGTEEETTR PSSDEEPFSALAFKIMADPYVGKLAFFRVYSGTLESGSYVFNSTKGKKERIGRILQMHAN SRKEIERVYSGDIAAAVGLKDTTTGDTLCDEKSPVILESMEFPEPVISVAVEPKTKADQE KMGTALARLAEEDPTFKVRTDEETGQTIISGMGELHLDIIVDRMNREFKVDCNVGKPQVA YRETIRKAVKAEGKFVRQSGGRGQYGHCWLELIPQEPGAGFEFENKVVGGAIPREYIGPV ESGVKEAMESGVIAGYPMVDVKVIVFDGSYHDVDSNEMAFKIAGSMGFKEGARKADPALL EPYMAVEVDVPEEYMGDVIGDLNSRRGRMDGMEARNGSQHIKAYVPLSEMFGYATDLRSK TQGRGNYSMTFDHYEEVPKKIAEEIQAKKNG >gi|292596537|gb|ADCV01000011.1| GENE 19 24694 - 24954 341 87 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 87 1 87 407 135 72 2e-31 MAKEKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLAEKGQADFQDYSMIDKAPEERERG ITINTAHVEYETANRHYAHVDCPGHAD Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:11:52 2011 Seq name: gi|292596536|gb|ADCV01000012.1| Veillonella sp. 3_1_44 cont1.12, whole genome shotgun sequence Length of sequence - 122955 bp Number of predicted genes - 126, with homology - 124 Number of transcription units - 48, operones - 25 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 16/0.000 + CDS 2 - 337 457 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 386 - 436 2.1 + Prom 381 - 440 3.5 2 1 Op 2 40/0.000 + CDS 518 - 829 511 ## PROTEIN SUPPORTED gi|227372927|ref|ZP_03856405.1| SSU ribosomal protein S10P 3 1 Op 3 58/0.000 + CDS 842 - 1483 1079 ## PROTEIN SUPPORTED gi|227372926|ref|ZP_03856404.1| LSU ribosomal protein L3P 4 1 Op 4 61/0.000 + CDS 1510 - 2133 1052 ## PROTEIN SUPPORTED gi|227372925|ref|ZP_03856403.1| LSU ribosomal protein L4P 5 1 Op 5 61/0.000 + CDS 2133 - 2417 463 ## PROTEIN SUPPORTED gi|227372924|ref|ZP_03856402.1| LSU ribosomal protein L23P 6 1 Op 6 60/0.000 + CDS 2444 - 3274 1449 ## PROTEIN SUPPORTED gi|227372923|ref|ZP_03856401.1| LSU ribosomal protein L2P 7 1 Op 7 59/0.000 + CDS 3298 - 3579 484 ## PROTEIN SUPPORTED gi|227372922|ref|ZP_03856400.1| SSU ribosomal protein S19P 8 1 Op 8 61/0.000 + CDS 3593 - 3928 551 ## PROTEIN SUPPORTED gi|227372921|ref|ZP_03856399.1| LSU ribosomal protein L22P 9 1 Op 9 50/0.000 + CDS 3945 - 4613 1134 ## PROTEIN SUPPORTED gi|227372920|ref|ZP_03856398.1| SSU ribosomal protein S3P 10 1 Op 10 50/0.000 + CDS 4613 - 5050 767 ## PROTEIN SUPPORTED gi|227372919|ref|ZP_03856397.1| LSU ribosomal protein L16P 11 1 Op 11 50/0.000 + CDS 5040 - 5243 324 ## PROTEIN SUPPORTED gi|227372918|ref|ZP_03856396.1| LSU ribosomal protein L29P 12 1 Op 12 50/0.000 + CDS 5262 - 5543 466 ## PROTEIN SUPPORTED gi|227372917|ref|ZP_03856395.1| SSU ribosomal protein S17P 13 1 Op 13 57/0.000 + CDS 5568 - 5936 608 ## PROTEIN SUPPORTED gi|227372916|ref|ZP_03856394.1| LSU ribosomal protein L14P 14 1 Op 14 48/0.000 + CDS 5955 - 6275 529 ## PROTEIN SUPPORTED gi|227372915|ref|ZP_03856393.1| LSU ribosomal protein L24P 15 1 Op 15 50/0.000 + CDS 6299 - 6838 890 ## PROTEIN SUPPORTED gi|227372914|ref|ZP_03856392.1| LSU ribosomal protein L5P 16 1 Op 16 50/0.000 + CDS 6855 - 7124 460 ## PROTEIN SUPPORTED gi|227372913|ref|ZP_03856391.1| SSU ribosomal protein S14P 17 1 Op 17 55/0.000 + CDS 7152 - 7538 634 ## PROTEIN SUPPORTED gi|227372912|ref|ZP_03856390.1| SSU ribosomal protein S8P 18 1 Op 18 46/0.000 + CDS 7563 - 8108 909 ## PROTEIN SUPPORTED gi|227372911|ref|ZP_03856389.1| LSU ribosomal protein L6P 19 1 Op 19 56/0.000 + CDS 8135 - 8506 416 ## PROTEIN SUPPORTED gi|227499179|ref|ZP_03929314.1| 50S ribosomal protein L18 20 1 Op 20 50/0.000 + CDS 8525 - 9028 824 ## PROTEIN SUPPORTED gi|227372909|ref|ZP_03856387.1| SSU ribosomal protein S5P 21 1 Op 21 48/0.000 + CDS 9043 - 9222 287 ## PROTEIN SUPPORTED gi|227372908|ref|ZP_03856386.1| LSU ribosomal protein L30P 22 1 Op 22 53/0.000 + CDS 9245 - 9691 592 ## PROTEIN SUPPORTED gi|121534652|ref|ZP_01666473.1| ribosomal protein L15 23 1 Op 23 28/0.000 + CDS 9693 - 10955 944 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 24 1 Op 24 12/0.000 + CDS 10968 - 11531 809 ## COG0563 Adenylate kinase and related kinases 25 1 Op 25 9/0.000 + CDS 11535 - 12305 762 ## COG0024 Methionine aminopeptidase 26 1 Op 26 . + CDS 12328 - 12546 282 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 27 1 Op 27 . + CDS 12573 - 12686 191 ## PROTEIN SUPPORTED gi|238928132|ref|ZP_04659892.1| ribosomal protein L36 28 1 Op 28 48/0.000 + CDS 12710 - 13078 613 ## PROTEIN SUPPORTED gi|227372901|ref|ZP_03856379.1| SSU ribosomal protein S13P 29 1 Op 29 32/0.000 + CDS 13098 - 13487 650 ## PROTEIN SUPPORTED gi|227372900|ref|ZP_03856378.1| SSU ribosomal protein S11P 30 1 Op 30 50/0.000 + CDS 13558 - 14562 1344 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 31 1 Op 31 6/0.000 + CDS 14575 - 14910 458 ## PROTEIN SUPPORTED gi|227372898|ref|ZP_03856376.1| LSU ribosomal protein L17P + Term 14922 - 14961 7.5 + Prom 14939 - 14998 8.8 32 2 Op 1 15/0.000 + CDS 15195 - 16103 1224 ## COG1122 ABC-type cobalt transport system, ATPase component 33 2 Op 2 34/0.000 + CDS 16103 - 16963 455 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 34 2 Op 3 8/0.000 + CDS 16953 - 17756 869 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 35 2 Op 4 . + CDS 17774 - 18538 665 ## COG0101 Pseudouridylate synthase + Term 18622 - 18659 6.1 + Prom 18609 - 18668 7.5 36 3 Op 1 23/0.000 + CDS 18836 - 20587 2242 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 37 3 Op 2 . + CDS 20589 - 21461 1030 ## COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit + Term 21493 - 21552 10.1 + Prom 21559 - 21618 5.4 38 4 Tu 1 . + CDS 21667 - 23013 1149 ## COG0534 Na+-driven multidrug efflux pump + Prom 23016 - 23075 4.9 39 5 Tu 1 . + CDS 23121 - 24008 1185 ## COG0287 Prephenate dehydrogenase + Term 24078 - 24120 4.2 + Prom 24033 - 24092 6.0 40 6 Op 1 . + CDS 24132 - 25169 1184 ## COG2038 NaMN:DMB phosphoribosyltransferase 41 6 Op 2 . + CDS 25166 - 26284 1389 ## COG2038 NaMN:DMB phosphoribosyltransferase + Term 26296 - 26327 0.1 + TRNA 26485 - 26559 94.1 # Gly GCC 0 0 + TRNA 26565 - 26640 90.0 # Asn GTT 0 0 + TRNA 26644 - 26719 83.8 # Lys TTT 0 0 + TRNA 26725 - 26799 78.0 # Glu TTC 0 0 + TRNA 26805 - 26880 91.0 # Val TAC 0 0 + TRNA 26884 - 26958 94.1 # Gly GCC 0 0 + TRNA 26966 - 27041 90.0 # Asn GTT 0 0 + TRNA 27050 - 27124 78.0 # Glu TTC 0 0 + TRNA 27128 - 27203 91.0 # Val TAC 0 0 - Term 27265 - 27303 7.1 42 7 Tu 1 . - CDS 27439 - 27762 442 ## COG1742 Uncharacterized conserved protein - Prom 27802 - 27861 6.0 - Term 27864 - 27903 8.2 43 8 Tu 1 . - CDS 27918 - 28817 974 ## COG0583 Transcriptional regulator - Prom 28869 - 28928 10.9 + Prom 28677 - 28736 4.9 44 9 Tu 1 . + CDS 28816 - 28896 69 ## + Term 28969 - 29006 -0.6 + Prom 29006 - 29065 7.4 45 10 Op 1 . + CDS 29115 - 29702 652 ## PROTEIN SUPPORTED gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 + Term 29714 - 29753 10.2 46 10 Op 2 . + CDS 29776 - 30537 440 ## gi|294794588|ref|ZP_06759724.1| ribosomal protein S4 + Prom 30583 - 30642 5.8 47 11 Op 1 59/0.000 + CDS 30732 - 31172 568 ## PROTEIN SUPPORTED gi|51894177|ref|YP_076868.1| 50S ribosomal protein L13 48 11 Op 2 . + CDS 31193 - 31585 525 ## PROTEIN SUPPORTED gi|121534667|ref|ZP_01666488.1| ribosomal protein S9 + Term 31604 - 31650 9.8 + Prom 31780 - 31839 7.0 49 12 Tu 1 . + CDS 31971 - 32549 76 ## COG3548 Predicted integral membrane protein + Term 32660 - 32697 9.1 + Prom 32763 - 32822 7.1 50 13 Tu 1 . + CDS 32871 - 33662 1189 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 33725 - 33778 11.3 + Prom 33744 - 33803 5.7 51 14 Op 1 . + CDS 33833 - 34588 207 ## PROTEIN SUPPORTED gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 52 14 Op 2 . + CDS 34625 - 34867 488 ## Vpar_1446 twin-arginine translocation protein, TatA/E family subunit 53 14 Op 3 . + CDS 34882 - 35190 508 ## Vpar_1445 heavy metal transport/detoxification protein + Term 35201 - 35246 9.5 54 15 Op 1 . + CDS 35259 - 35702 451 ## Vpar_1444 cupin 2 conserved barrel domain protein 55 15 Op 2 . + CDS 35719 - 37122 1648 ## COG0471 Di- and tricarboxylate transporters + Term 37132 - 37163 3.4 + Prom 37151 - 37210 7.1 56 16 Tu 1 . + CDS 37335 - 37466 57 ## + Term 37488 - 37533 -0.4 + Prom 37521 - 37580 6.8 57 17 Op 1 8/0.000 + CDS 37658 - 39328 2356 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 58 17 Op 2 . + CDS 39371 - 40594 1721 ## COG1171 Threonine dehydratase 59 17 Op 3 32/0.000 + CDS 40613 - 42322 1946 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 60 17 Op 4 . + CDS 42322 - 42810 708 ## COG0440 Acetolactate synthase, small (regulatory) subunit 61 17 Op 5 . + CDS 42822 - 43607 686 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA + Term 43619 - 43669 -0.5 + Prom 43660 - 43719 8.5 62 18 Tu 1 . + CDS 43749 - 44756 1566 ## COG0059 Ketol-acid reductoisomerase + Term 44805 - 44833 1.0 + Prom 44850 - 44909 5.9 63 19 Op 1 . + CDS 44930 - 45391 520 ## Vpar_1435 hypothetical protein 64 19 Op 2 . + CDS 45404 - 46123 885 ## COG2323 Predicted membrane protein + Term 46205 - 46236 3.4 + Prom 46144 - 46203 11.3 65 20 Op 1 . + CDS 46244 - 47971 1645 ## COG1032 Fe-S oxidoreductase 66 20 Op 2 7/0.000 + CDS 47981 - 48835 789 ## COG1496 Uncharacterized conserved protein + Term 48861 - 48906 3.6 + Prom 48900 - 48959 5.9 67 20 Op 3 14/0.000 + CDS 49012 - 49698 713 ## COG0325 Predicted enzyme with a TIM-barrel fold 68 20 Op 4 1/0.000 + CDS 49752 - 50249 723 ## COG1799 Uncharacterized protein conserved in bacteria 69 20 Op 5 . + CDS 50276 - 51070 983 ## COG0345 Pyrroline-5-carboxylate reductase 70 20 Op 6 . + CDS 51073 - 51858 318 ## PROTEIN SUPPORTED gi|227509386|ref|ZP_03939435.1| ribosomal protein S4e + Term 51865 - 51907 10.5 71 21 Op 1 4/0.000 + CDS 51916 - 52563 453 ## COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 72 21 Op 2 4/0.000 + CDS 52532 - 53803 1689 ## COG0373 Glutamyl-tRNA reductase 73 21 Op 3 6/0.000 + CDS 53808 - 54746 1098 ## COG0181 Porphobilinogen deaminase 74 21 Op 4 2/0.000 + CDS 54743 - 56251 1899 ## COG0007 Uroporphyrinogen-III methylase 75 21 Op 5 7/0.000 + CDS 56261 - 57235 1324 ## COG0113 Delta-aminolevulinic acid dehydratase 76 21 Op 6 . + CDS 57245 - 58549 1584 ## COG0001 Glutamate-1-semialdehyde aminotransferase 77 21 Op 7 . + CDS 58596 - 59057 392 ## Vpar_1421 transcriptional regulator, XRE family + Prom 59121 - 59180 6.2 78 22 Tu 1 . + CDS 59283 - 60035 303 ## Vpar_1420 hypothetical protein + Term 60129 - 60173 -0.9 + Prom 60389 - 60448 8.0 79 23 Tu 1 . + CDS 60516 - 61280 307 ## Vpar_1418 hypothetical protein + Prom 61293 - 61352 5.5 80 24 Op 1 . + CDS 61527 - 61673 130 ## gi|282849940|ref|ZP_06259323.1| hypothetical protein HMPREF1035_0993 81 24 Op 2 . + CDS 61685 - 62572 512 ## Vpar_1417 hypothetical protein + Prom 62601 - 62660 3.9 82 25 Op 1 . + CDS 62729 - 63160 179 ## Vpar_1416 hypothetical protein 83 25 Op 2 . + CDS 63184 - 63573 242 ## Vpar_1415 hypothetical protein + Term 63638 - 63672 2.2 + Prom 63672 - 63731 12.4 84 26 Op 1 12/0.000 + CDS 63776 - 65473 1636 ## COG2831 Hemolysin activation/secretion protein 85 26 Op 2 . + CDS 65518 - 71427 5611 ## COG3210 Large exoproteins involved in heme utilization or adhesion 86 26 Op 3 . + CDS 71450 - 71917 358 ## Vpar_1412 hypothetical protein + Term 72028 - 72079 14.2 + Prom 71943 - 72002 8.8 87 27 Op 1 . + CDS 72176 - 72919 349 ## COG1451 Predicted metal-dependent hydrolase 88 27 Op 2 . + CDS 72932 - 76339 3638 ## COG0587 DNA polymerase III, alpha subunit + Term 76425 - 76469 -0.1 + Prom 76341 - 76400 4.5 89 28 Op 1 . + CDS 76514 - 78262 2432 ## COG0469 Pyruvate kinase 90 28 Op 2 1/0.000 + CDS 78298 - 79041 1002 ## COG0670 Integral membrane protein, interacts with FtsH 91 28 Op 3 . + CDS 79055 - 79966 771 ## COG0583 Transcriptional regulator + Term 80088 - 80133 8.1 + Prom 80169 - 80228 7.9 92 29 Tu 1 . + CDS 80352 - 81755 1903 ## COG0471 Di- and tricarboxylate transporters + Term 81774 - 81815 1.3 93 30 Op 1 6/0.000 + CDS 81878 - 82147 496 ## COG3052 Citrate lyase, gamma subunit 94 30 Op 2 6/0.000 + CDS 82147 - 83112 1411 ## COG2301 Citrate lyase beta subunit 95 30 Op 3 . + CDS 83102 - 84649 2311 ## COG3051 Citrate lyase, alpha subunit + Term 84731 - 84781 13.2 + Prom 84804 - 84863 7.2 96 31 Op 1 . + CDS 84898 - 85401 345 ## Vpar_1398 hypothetical protein 97 31 Op 2 . + CDS 85417 - 86292 1051 ## Vpar_1396 hypothetical protein 98 31 Op 3 . + CDS 86321 - 86677 337 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain + Prom 86826 - 86885 7.1 99 32 Tu 1 . + CDS 86919 - 88232 1648 ## COG0477 Permeases of the major facilitator superfamily + Prom 88287 - 88346 6.3 100 33 Tu 1 . + CDS 88379 - 88996 181 ## Vpar_1393 hypothetical protein + Term 89087 - 89117 -0.3 101 34 Op 1 . - CDS 89146 - 89574 491 ## Vpar_1392 hypothetical protein 102 34 Op 2 . - CDS 89574 - 90497 852 ## COG0583 Transcriptional regulator + Prom 90614 - 90673 6.7 103 35 Tu 1 . + CDS 90884 - 94420 5166 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit + Term 94449 - 94484 7.4 + Prom 94575 - 94634 4.8 104 36 Tu 1 . + CDS 94678 - 96294 1895 ## COG0500 SAM-dependent methyltransferases + Term 96367 - 96429 9.6 + Prom 96424 - 96483 10.0 105 37 Tu 1 . + CDS 96655 - 97683 787 ## Vpar_1388 transcriptional regulator protein-like protein + Term 97685 - 97735 8.1 - Term 97665 - 97730 15.2 106 38 Tu 1 . - CDS 97731 - 99218 1626 ## COG0591 Na+/proline symporter - Prom 99388 - 99447 8.3 + Prom 99288 - 99347 5.2 107 39 Tu 1 . + CDS 99535 - 101403 1489 ## COG0514 Superfamily II DNA helicase + Term 101425 - 101469 4.5 + Prom 101422 - 101481 5.5 108 40 Op 1 16/0.000 + CDS 101529 - 102320 975 ## COG0207 Thymidylate synthase + Term 102351 - 102393 1.4 + Prom 102358 - 102417 5.2 109 40 Op 2 . + CDS 102452 - 102946 619 ## COG0262 Dihydrofolate reductase 110 40 Op 3 . + CDS 102943 - 105258 180 ## PROTEIN SUPPORTED gi|191638372|ref|YP_001987538.1| 30S ribosomal protein S1 + Term 105338 - 105381 10.0 + Prom 105410 - 105469 5.6 111 41 Tu 1 . + CDS 105517 - 107001 1992 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 107031 - 107081 8.0 + Prom 107030 - 107089 6.9 112 42 Tu 1 . + CDS 107173 - 108240 582 ## EFER_3822 hypothetical protein + Term 108291 - 108334 9.5 - Term 108283 - 108317 3.2 113 43 Tu 1 . - CDS 108323 - 108898 365 ## Vpar_1381 hypothetical protein - Prom 109136 - 109195 8.8 + Prom 109110 - 109169 11.9 114 44 Op 1 . + CDS 109202 - 110152 589 ## Vpar_1380 hypothetical protein 115 44 Op 2 . + CDS 110219 - 110566 256 ## gi|294794654|ref|ZP_06759790.1| conserved hypothetical protein + Prom 110580 - 110639 6.0 116 45 Op 1 . + CDS 110671 - 111099 91 ## Vpar_1379 hypothetical protein + Prom 111102 - 111161 1.6 117 45 Op 2 . + CDS 111197 - 112744 2404 ## COG0513 Superfamily II DNA and RNA helicases + Term 112748 - 112788 4.2 + Prom 112784 - 112843 13.1 118 46 Op 1 2/0.000 + CDS 112915 - 113334 556 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 113339 - 113390 15.2 + Prom 113432 - 113491 9.6 119 46 Op 2 . + CDS 113528 - 114364 997 ## COG0648 Endonuclease IV + Prom 114372 - 114431 7.2 120 47 Op 1 28/0.000 + CDS 114581 - 115813 1013 ## COG0420 DNA repair exonuclease 121 47 Op 2 . + CDS 115814 - 118897 3023 ## COG0419 ATPase involved in DNA repair 122 47 Op 3 . + CDS 118927 - 119364 191 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 123 47 Op 4 . + CDS 119364 - 120071 877 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 124 47 Op 5 . + CDS 120068 - 120502 629 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 125 47 Op 6 . + CDS 120507 - 121136 678 ## Vpar_1370 hypothetical protein + Term 121164 - 121203 8.4 + Prom 121140 - 121199 3.4 126 48 Tu 1 . + CDS 121220 - 122059 1054 ## COG0421 Spermidine synthase + Term 122073 - 122132 1.2 + TRNA 122278 - 122353 58.5 # His GTG 0 0 + TRNA 122378 - 122452 72.0 # Gln TTG 0 0 + TRNA 122457 - 122532 83.8 # Lys TTT 0 0 + 5S_RRNA 122871 - 122929 100.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|292596536|gb|ADCV01000012.1| GENE 1 2 - 337 457 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 109 297 405 407 180 77 3e-44 RKDIERGQVLAKPGSINPHTKFKAEVYVLTKEEGGRHTPFFSNYRPQFYFRTTDVTGVVN LPEGVEMCMPGDNVTMEIELITPIAIEEGLRFAIREGGHTVGAGVVTEIEG >gi|292596536|gb|ADCV01000012.1| GENE 2 518 - 829 511 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372927|ref|ZP_03856405.1| SSU ribosomal protein S10P [Veillonella parvula DSM 2008] # 1 103 1 103 103 201 100 1e-50 MAKQQKIRIRLKAYDHKALDQSAAKIVDTAKRNGAMVSGPIPLPTEKNIFTILRSVHVNK DSREQFEMRTHKRLIDILEPNSKTVDAITRLDLPAGVSIEIKL >gi|292596536|gb|ADCV01000012.1| GENE 3 842 - 1483 1079 213 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372926|ref|ZP_03856404.1| LSU ribosomal protein L3P [Veillonella parvula DSM 2008] # 1 213 1 213 213 420 100 1e-116 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH LTKPVKGQFDKAGVAPVKYLREVRVANAADYTVGQTLAADIFAEGELVDVVGTGKGKGFA GTIKRHNFSRGPETHGSKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLSVV KVDAERNLLLVKGGIPGAKGSLVMVRNTVKPVK >gi|292596536|gb|ADCV01000012.1| GENE 4 1510 - 2133 1052 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372925|ref|ZP_03856403.1| LSU ribosomal protein L4P [Veillonella parvula DSM 2008] # 1 207 1 207 207 409 100 1e-113 MPTVATYNQSGVKVGEIQLNDAVFGVEVNEAVMHQAVVRQLSNERLGTHATKTRGMVRGG GRKPWKQKGTGRARAGSSRSPIWIGGGTTFGPQPRSYYKAMPRKARRLAVKSALSDKVNN SELYVLEEITLAAPKTKEVLNIINSFNVGDAKVLFITEGDVNVERSARNIQGVKALACEG MNIFDLLHYDKLFITKGAVAKIEEVLG >gi|292596536|gb|ADCV01000012.1| GENE 5 2133 - 2417 463 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372924|ref|ZP_03856402.1| LSU ribosomal protein L23P [Veillonella parvula DSM 2008] # 1 94 1 94 94 182 100 5e-45 MQLHDVLIRPVITEKSTMLMEEGKYTFRVPLTANKVQIRQAVEKIFNVKVEKVATIRVLG KTKRMGRTQGKRSDYKKAIVTLKAGESIEFFEGV >gi|292596536|gb|ADCV01000012.1| GENE 6 2444 - 3274 1449 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372923|ref|ZP_03856401.1| LSU ribosomal protein L2P [Veillonella parvula DSM 2008] # 1 276 1 276 276 562 99 1e-159 MAIKSFKPYSAGRRFMTVSAFDEITASKPEKSLLAKISQKGGRNNTGKMTVRHQGGGHKR QYRIIDFKRTKDNIPAKVATIEYDPNRSSRIALLNYADGEKRYILAPNGLKVGDVVFSGP ESDIKPGNCLPLANIPDGTQIHNIELKIGKGGQIVRSAGTSAQLMGKDNGYAILRLPSGE MRRVRQECRATIGVVGNADHSNLVIGKAGRHRWMGVRPGNRGVVMNPCDHPHGGGEGKSP VGRKHPVTPWGKPAHGVKTRDKKKASNSLIIKRRTK >gi|292596536|gb|ADCV01000012.1| GENE 7 3298 - 3579 484 93 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372922|ref|ZP_03856400.1| SSU ribosomal protein S19P [Veillonella parvula DSM 2008] # 1 93 1 93 93 191 98 2e-47 MSRSIKKGPFVADHLLKKVEALNETNEKKVVKTWSRASTIIPSFVGHTIAVHDGRKHVPV FITEDMVGHKLGEFAPTRTYRGHGKDEKSTGKK >gi|292596536|gb|ADCV01000012.1| GENE 8 3593 - 3928 551 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372921|ref|ZP_03856399.1| LSU ribosomal protein L22P [Veillonella parvula DSM 2008] # 1 111 1 111 111 216 100 3e-55 MEAKAIARHIRIAPRKIRIVADLVRGKNIGEAFAILKFTPKVGADVVEKVMRSAIANAEH NFDMNVDNLYVSEIFVDQGPTLKRIHPRSRGQAFKILKRTSHVTVVVKERA >gi|292596536|gb|ADCV01000012.1| GENE 9 3945 - 4613 1134 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372920|ref|ZP_03856398.1| SSU ribosomal protein S3P [Veillonella parvula DSM 2008] # 1 222 1 222 222 441 99 1e-123 MGQKVNPHGLRVGIVKDWDAKWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTN KRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDATLVAENIA GQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRAD IDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQAPAKKEEGGK >gi|292596536|gb|ADCV01000012.1| GENE 10 4613 - 5050 767 145 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372919|ref|ZP_03856397.1| LSU ribosomal protein L16P [Veillonella parvula DSM 2008] # 1 145 1 145 145 300 100 3e-80 MLIPKRVKHRKQFRGRMKGRAMRGNTVSHGEFGLVACEPSWITNRQIEAARIAMTRYIKR GGKVWIKIFPDKPITAKPAGTRMGSGKGSPEYWVAVVKPGRVMFEMDGVPEATAREAMRL ASHKLPIKCKFVVKGKELGGDVNEG >gi|292596536|gb|ADCV01000012.1| GENE 11 5040 - 5243 324 67 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372918|ref|ZP_03856396.1| LSU ribosomal protein L29P [Veillonella parvula DSM 2008] # 1 67 1 67 67 129 100 7e-29 MKVNDIRNMSAAEMEQKVSGLKEELFNLRFQLATGQLENPMRIREVKKTIARIKTVQREV ELKSENA >gi|292596536|gb|ADCV01000012.1| GENE 12 5262 - 5543 466 93 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372917|ref|ZP_03856395.1| SSU ribosomal protein S17P [Veillonella parvula DSM 2008] # 1 93 1 93 93 184 97 2e-45 MKRRLKIVAEERNVRKVRVGKVVSDKMDKTVVVAVERKVPHALYNKPMVSTKRFKAHDEN NECQIGDTVKIVETRPLSKDKCWRVVEILERQK >gi|292596536|gb|ADCV01000012.1| GENE 13 5568 - 5936 608 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372916|ref|ZP_03856394.1| LSU ribosomal protein L14P [Veillonella parvula DSM 2008] # 1 122 1 122 122 238 100 8e-62 MIQQQTILNVADNTGAKRIMCIQVMGGSYRKFGNIGDVIVASVKDASPGGVVKKGDVVKA VIVRSKKGIRRQDGSYIRFDENAAVVIKDDKTPRGTRIFGPVARELREKDFMKIVSLAPE VL >gi|292596536|gb|ADCV01000012.1| GENE 14 5955 - 6275 529 106 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372915|ref|ZP_03856393.1| LSU ribosomal protein L24P [Veillonella parvula DSM 2008] # 1 106 1 106 106 208 100 1e-52 MAKLQIKKGDTVVVISGKDKGKQGTVIATEPKKERVFVEGVNTVKRHTKPSQANPQGGIV TKEAGIHVSNVMVVDPETKTATRIKKVEGKDGKFVRATVKSGTVLK >gi|292596536|gb|ADCV01000012.1| GENE 15 6299 - 6838 890 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372914|ref|ZP_03856392.1| LSU ribosomal protein L5P [Veillonella parvula DSM 2008] # 1 179 1 179 179 347 100 2e-94 MSRLFEQYNSEIKKSMQEKFQYGNVMEIPKLEKIVINIGVGDAVGNAKALEAAVNDLTII AGQKPVITKAKKSIANFKVREGMALGTKVTLRGERMYEFLDRLINAALPRVRDFRGISAT AFDGRGNYALGLKEQLIFPEIEYDQVERVTGMDIIIVTSAKTDEEARELLTQFGMPFEK >gi|292596536|gb|ADCV01000012.1| GENE 16 6855 - 7124 460 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372913|ref|ZP_03856391.1| SSU ribosomal protein S14P [Veillonella parvula DSM 2008] # 1 89 1 89 89 181 100 1e-44 MAKKSMIEREKKRAKIVEKYAAKREALKAAGDYEGLSKLPANASPTRLHNRCNLTGRPHG YMRKFGISRIAFRELAYKGQIPGVKKASW >gi|292596536|gb|ADCV01000012.1| GENE 17 7152 - 7538 634 128 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372912|ref|ZP_03856390.1| SSU ribosomal protein S8P [Veillonella parvula DSM 2008] # 1 128 1 128 128 248 100 8e-65 MVMTDPIADMLTRIRNANAALHETVNIPASRMKAAVLDILLQEGFVKNVEKEENTLKVTL KYGSNNEKVITGIKRISKPGLRVYAKKEELPRVLGGLGIAVISTSKGVMSDKQARKEGLG GEVIAYVW >gi|292596536|gb|ADCV01000012.1| GENE 18 7563 - 8108 909 181 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372911|ref|ZP_03856389.1| LSU ribosomal protein L6P [Veillonella parvula DSM 2008] # 7 181 1 175 175 354 100 1e-96 MSRIGRMPIEIPAGVTVTYDNHHMNVKGPKGELSRDLHPDMNITVEGNTITVTRPSDDKN HRSLHGLTRALVANMVTGVSEGFTKTLEINGVGYRAAKQGNKLALTLGFSHPVEMEAPAG ITIDVPAPNKIVVSGADKEVVGAVAADIRKWRKPEPYKGKGIRYEGEVVRRKAGKAGAKG K >gi|292596536|gb|ADCV01000012.1| GENE 19 8135 - 8506 416 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227499179|ref|ZP_03929314.1| 50S ribosomal protein L18 [Acidaminococcus sp. D21] # 1 123 1 123 123 164 66 1e-39 MNILPRKSSRNIARAKRHLRIRRHISGTATCPRLNVYRSLSNIYAQVIDDVAGTTLVAAS SLDKDLNLSYGGNVAAAKAVGEAVAKKAIAKGIDTVVFDRGGYIYHGRVAALAEGAREAG LKF >gi|292596536|gb|ADCV01000012.1| GENE 20 8525 - 9028 824 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372909|ref|ZP_03856387.1| SSU ribosomal protein S5P [Veillonella parvula DSM 2008] # 1 167 1 167 167 322 100 7e-87 MARIDYTSLDLKERVVFINRVAKVVKGGRRFSFSALVVVGDGNGYVGVGLGKAAEVPEAI RKGIDDAKKNIVNVAIKNGTIPHSVTGVFGAGRVFLKPAAEGTGVIAGGPVRAVLELVGV RNILTKSLGSSNPNNMVRATIEGLKDLKRASEVAELRGKTVEEIYNA >gi|292596536|gb|ADCV01000012.1| GENE 21 9043 - 9222 287 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372908|ref|ZP_03856386.1| LSU ribosomal protein L30P [Veillonella parvula DSM 2008] # 1 59 1 59 59 115 100 1e-24 MAQVKVTLTRSLIGRPEDQRATVKALGLKKTNSQVVKEVTPQIEGMLHKVRHLVKVEEV >gi|292596536|gb|ADCV01000012.1| GENE 22 9245 - 9691 592 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121534652|ref|ZP_01666473.1| ribosomal protein L15 [Thermosinus carboxydivorans Nor1] # 1 148 1 146 146 232 80 6e-60 MKLHELQPAAGSKKTRTRVGRGLGSGLGKTSGRGQKGQNSRSGGGVRSGFEGGQMPLYRR LPKRGFNNSVFAKQYAEVNVAQLNRFEDGATVDPVALIEAGILKNVRDGIRILGNGTLET KNLTVIANGFTKAAEEKITAAGGKVEVI >gi|292596536|gb|ADCV01000012.1| GENE 23 9693 - 10955 944 420 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 10 420 19 438 447 368 47 1e-101 MLDSLSNIFKITELRNKILYTLMMFAVFRAGIHIPVPGVDASVIESLFTSGNLFGLLDLF AGGALSKFSIFAMSITPYINASIIMQLLQSVVPQFEAWSKDGEDGRKKIAKVTRYGTVVL GFVQAAGMAFALRANNALVNNDFLSVFVVAIILTAGTCLLMWIGEQITAYGIGNGISLII FAGIVARLPDGLETIYQYIQNGTINMFQAFLFAVIALAMIAVVVAVTQGQRRIPIQYAKR VVGRKMYGGHSTFLPLKVNQAGVIPIIFASSVLMFPVTIAQFIDNEFVHKAADLFTWGTP LQTALYAILIFIFTYFYTAISINITDMADNMKKYGGFIPGIRAGKPTADYVDNVMTKITL AGAVFLAVVAIIPNFLGSITGVQGVYFGGTALLIVVGVALDTMQQIESLMVTRHYKGFVK >gi|292596536|gb|ADCV01000012.1| GENE 24 10968 - 11531 809 187 aa, chain + ## HITS:1 COG:BH0155 KEGG:ns NR:ns ## COG: BH0155 COG0563 # Protein_GI_number: 15612718 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Bacillus halodurans # 1 186 1 213 217 209 53.0 2e-54 MYILLMGPPGAGKGTQAARLIEKYGIPQISTGDMFRAAIKNETPLGVEAKKYIDAGQLVP DSVTVGIVRDRLVKDDCKSGFILDGFPRTTAQAVSLDAILKELGISLDAVLNLNVPSEEL VKRISERAVLENRADDNPETVQKRLAVYEESTKPLIDYYRNSGLYQEINGLQDVDAVFAD IIKALEK >gi|292596536|gb|ADCV01000012.1| GENE 25 11535 - 12305 762 256 aa, chain + ## HITS:1 COG:BS_map KEGG:ns NR:ns ## COG: BS_map COG0024 # Protein_GI_number: 16077206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Bacillus subtilis # 1 247 1 246 248 289 55.0 3e-78 MIILKSPHEIECIRKASKLTADTLSLLVKKAKPGITTLELDTIAEEYIRSHGGIPSCKGY YGFPATICASINEEVVHGIPSAKRKLKNGDVLSIDLVSSIDGYHGDSAVTIPIGHVKPDV MKLLKVTEESLFKGIEQVKVGNRIGAIGHAVQTYCEKHGYGVVRDFVGHGLGREMHEDPQ IPNYGSPDQGPLMKPGMVLCIEPMITLGTHRVRVLGDDWTAVTVDGKPAAHFEHTVVVTE NGPEILTMREEPRLIK >gi|292596536|gb|ADCV01000012.1| GENE 26 12328 - 12546 282 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 113 73 5e-24 MSKEDVIEVEGTVVEALPNAMFQVELENGHIVLAHVSGKMRMNFIRILPGDKVTMELTPY DLNRGRITYRFK >gi|292596536|gb|ADCV01000012.1| GENE 27 12573 - 12686 191 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238928132|ref|ZP_04659892.1| ribosomal protein L36 [Selenomonas flueggei ATCC 43531] # 1 37 1 37 37 78 94 2e-13 MKVQPSVKKICEKCKIIKRKGRVMVICENPKHKQKQG >gi|292596536|gb|ADCV01000012.1| GENE 28 12710 - 13078 613 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372901|ref|ZP_03856379.1| SSU ribosomal protein S13P [Veillonella parvula DSM 2008] # 1 122 1 122 122 240 100 2e-62 MARIAGVDLPRDKRVEIGLTYIYGIGPTLASEIIAKTGINPDTRVRDLSEDEVAKIRELL DADYKVEGDLRREEALNIKRLIEINSYRGKRHRMGLPLRGQRTKTNARTRKGPRKAIAGK KK >gi|292596536|gb|ADCV01000012.1| GENE 29 13098 - 13487 650 129 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372900|ref|ZP_03856378.1| SSU ribosomal protein S11P [Veillonella parvula DSM 2008] # 1 129 1 129 129 254 99 1e-66 MAKKVVRTKRKEKKHIESGAAHIRSTFNNTIVTLTDTNGNALSWASAGGLGFRGSRKSTP FAAQMAAEQAAKAAMEHGLRTVEVFVKGPGSGREAAIRALQAAGLEVTSIKDVTPIPHNG CRPPKRRRV >gi|292596536|gb|ADCV01000012.1| GENE 30 13558 - 14562 1344 334 aa, chain + ## HITS:1 COG:BH0162 KEGG:ns NR:ns ## COG: BH0162 COG0202 # Protein_GI_number: 15612725 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Bacillus halodurans # 1 320 1 303 314 288 50.0 8e-78 MSEEKKLKIEKVDIADGGRYGKFVCEPLDRGYGITLGNSLRRILLSSLDGAAITSIKIDG VLHEFSTIPGIREDVTDIILNLKQLCIKVEEEAQLPLEVHFDFQKDGILTAADLAEQFPP EVEVLNPELVIATMDETAHFVMDVVIERGKGYVPSTKNKKDTDVIGCIPIDSIFSPILRA KYEVSDVRVGNEMDFDKLTLEVWTDGSITAADAVAKSAAIMIGYLGNFTKLAHSADVVDV NTGEGGIVIDPVGSDNEEPAVDDGPAKISIDELELSVRAYNCLKRAGINTIADLLDKTID DLGKVRNLGKKSIDEIEEKLNNHPGGFQLKQKGE >gi|292596536|gb|ADCV01000012.1| GENE 31 14575 - 14910 458 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372898|ref|ZP_03856376.1| LSU ribosomal protein L17P [Veillonella parvula DSM 2008] # 19 111 1 93 93 181 100 2e-44 MYRKLGRDSSARKALFRSMLTSFFQYERIETTEAKAKELRSLADQMVTLAKRGDLHARRQ VLAYLMDESVVKKLFDTIAPKYADRQGGYTRVIKTGLRKGDAAPLAIIELV >gi|292596536|gb|ADCV01000012.1| GENE 32 15195 - 16103 1224 302 aa, chain + ## HITS:1 COG:CAC3102 KEGG:ns NR:ns ## COG: CAC3102 COG1122 # Protein_GI_number: 15896353 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Clostridium acetobutylicum # 7 278 5 277 281 308 56.0 1e-83 MNEQDIMIEVNHMSHIYTDENGNDVRALDDVNLSIKRGEFVCIIGTNGSGKSTLAKHFNV LLQPSEGHINVCGFDTRDEAHIWNIRQHVGMVFQNPDNQIVAAVVEEDVAFGPENLGIPS AEIRERVNAALAAVNMTEYREHGPHLLSGGQKQRIAIAGVLAMKPDCIVLDEPTAMLDPK GRREVLETVHKLNKEEGITIVYITHFMEEAVTADRVVVMKNGVKLHDGTPREIFSHVDTL KGLGLDVPVASEIAFKLNAKGYEVGKSIINNEELAKGLKGSKLGKQLSAIHSTDASRGEG TH >gi|292596536|gb|ADCV01000012.1| GENE 33 16103 - 16963 455 286 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 22 262 146 380 398 179 41 4e-44 MAIVLDNITYTYGMGTPFEKTALSGVSLTIENGEFLGVIGHTGSGKSTFVQHLNGLLHPT TGTVTVNGVDISASTEEAKKMRHKVGMVFQYPEHQLFEETIAQDIAFGPKNLGLSADDVD ERVRDAMKFVGLDYDTYAERSPFHLSGGQMRRVAIAGVVAMNPDFLVLDEPSAGLDPFGR EEIFEEIIRLHKEKGITVILVSHNMEDISRMASRLVVLDKGRVVLDGEPMDIFNNHRDEL QAVGVDVPPVSVTMEYLREQGLDVSNRVLSVDDAVQAILEGGSHVK >gi|292596536|gb|ADCV01000012.1| GENE 34 16953 - 17756 869 267 aa, chain + ## HITS:1 COG:CAC3100 KEGG:ns NR:ns ## COG: CAC3100 COG0619 # Protein_GI_number: 15896351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 1 249 1 251 267 280 55.0 2e-75 MLNNITIGQYFPGNSFLHRMDPRAKIIATTIFVVAIFLANSPLAYGIVGGFTIFAMLLSR LPLRLMWSAIKPLWIIIVFTMGIHIFTTPGNPIFQWGIINITDHGVAMGLQMAARLIFLI LFSSLLTYTTSPIRLTDGIEHLLNPFRRIGVPAHELAMMMTIALRFIPTLLDETDRIMKA QSARGADFVTGSIIQRAKNMVPLLVPLFISAFRRADELAIAMEARCYRGGVNRTRMKELQ VTYVDYIGVGAVVLVTIVLVALWWLDL >gi|292596536|gb|ADCV01000012.1| GENE 35 17774 - 18538 665 254 aa, chain + ## HITS:1 COG:BH0167 KEGG:ns NR:ns ## COG: BH0167 COG0101 # Protein_GI_number: 15612730 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Bacillus halodurans # 1 232 8 238 263 192 42.0 4e-49 MAYDGTDLAGYQKQPNDKGLTVQGCLEYGLSRICNEPIQIYGASRTDAGVHAKFQVCTFQ TSGTIPVENIPRAMIAHIPKDIVVLEAVEIPLDWKPRWNIYGKEYVYTIHNQLIADPLTK RYHWHVKKPLDIDRMQAAGNELLGTHDFTTLKGTNSTPADPVKTILGIHVKVKEAHVTIS VVGDGFLYHMVRNIVGLLVDVGLGRRKVEDIKGYLVAKDRRVIGKTAPAQGLCLEEIFFT EERQQEVLRNKYFR >gi|292596536|gb|ADCV01000012.1| GENE 36 18836 - 20587 2242 583 aa, chain + ## HITS:1 COG:BH2374_2 KEGG:ns NR:ns ## COG: BH2374_2 COG0674 # Protein_GI_number: 15614937 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Bacillus halodurans # 195 583 6 393 393 417 50.0 1e-116 MQKRKDFIWKMGGQQGEGIESCGEIMATILAKEGYSLYSQRLFASRIKGGHTTFALRVAL EQIMSIGEGVDFLLSLDQETVDMHGSEVRDGGYIICDSKVNPDFSKFEGTKINCLSLPIS ETAMKQGSLLMRNIVALGMSVALLGFDTKMFKDAITEKFAKKSQEIIDKNLAAFDDGHSL VMEKLGDVEIDTLPAPGKKDQMFLLGNEACALGAIAAGSRFMASYPITPASEVMEYMIKT MDKLGSTVVQTEDEIAACMTAMGGVYAGVRGFTCTSGPGLSLMAESLSMASMAELPMVVI DVQRSGPSTGMATKVEQSDIDAACYNAHGDYSGIVISPTSIEECFYEIQKAFNLAEMYQC PVIFMPDLQQGLNKQSVPSFDLNRVPINRGKMMKEAELPELVQPNYFKRFELTEDGISPR TIPGMKNGLFLSTGLEHNEEGKPAEAPTMHVAQTDKRFRKLETVADNYEPFLNNAKYDEA DVLVVGMASSRGAIEEAVAEFDQEGVKVNHLQLRLIKPFPAKQLQPFFDAAKKVVIVEHN KTGQLANLFKINMHKKHKISSCLKYDGNPFTKSYVKNAIKEVL >gi|292596536|gb|ADCV01000012.1| GENE 37 20589 - 21461 1030 290 aa, chain + ## HITS:1 COG:BH2373 KEGG:ns NR:ns ## COG: BH2373 COG1013 # Protein_GI_number: 15614936 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit # Organism: Bacillus halodurans # 1 289 1 287 288 361 58.0 1e-99 MTTAKDYRNDIRPNWCPGCGHYGVQAAITDAVVAKNIPPEKLAVISGIGCSSRIGGYFYA YGAHTTHGRALPYAQGVKLANQDLEVIAFSGDGDAFAIGMGHTIHAFKRNVNMTYVVMDN HVYGLTKGQASPRSDIGFVTKTTPHGAFESPLSVCETAIAAGATFVAQSYMVNRKELVDL IQQAMDHEGFSFINVFSPCVTYNKRNSYDWFKEHLVALPEGYDPTDRATALKTLGDTDGL VTGLIYQNTSKPSFEKAMAAANGGPHPRPLTEDVVKPDQALFDSLCNQFK >gi|292596536|gb|ADCV01000012.1| GENE 38 21667 - 23013 1149 448 aa, chain + ## HITS:1 COG:BH2936 KEGG:ns NR:ns ## COG: BH2936 COG0534 # Protein_GI_number: 15615498 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Bacillus halodurans # 10 446 9 446 452 276 38.0 8e-74 MKAYEKGISLSIWTLSWPIFIEVFLQMLVGNIDQLMMSHYSPQAVAAVANANQILNIFIM LIIVMSTATTILIAQYLGARNQSKLSEVCTVSLMMNFLFSSIAAVFFITCHEWIFTWLGI PPETMSDTSIYTTIVAAGLPIQAMYYALVAVFRGHSLTRVTMYIALVMNIIHILTNYVLI FGHGPIPSLGVLGVSISTWLSKVVGLVIIGYTFKKLLTLEVSFKFLKPFSWHTIKSLLHI SVPSGGETLSYQLSQTTIMKMVNMLGLAVINTKVYVSVIAMLCYVYTIALSNASQVIVGF LMGAKRQEEVTSRVWKSMYLAIAINVGLATFFYVTSDFVVSVFTSDPEILELAHNVLLVE IFLELGRAVNIVMVGCLQAAGDIRTPMLVGIFGMWLCAVPLSYLFGIYWGWGLVGIWIAM AADEILRGLLFIYRWYSGKWRNKNLIEA >gi|292596536|gb|ADCV01000012.1| GENE 39 23121 - 24008 1185 295 aa, chain + ## HITS:1 COG:SP1373 KEGG:ns NR:ns ## COG: SP1373 COG0287 # Protein_GI_number: 15901227 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 1 282 1 282 367 145 30.0 8e-35 MSKTVGIIGLGLLGGSLAKALKEYTDYEVVGYARRQEVCDAAIQDGVVKAAWTEVEPLIK NSDIVVFSLPPDTNARLFTETAHLFRPGQVVTDVSSAKENFVRAVYESIPKGTVFVSVHP MAGSEKGGYEVSHKNLFKGMGWIVLEDKASDVYSEEVAQELADMGRALGSRIEFVDIYAH DAYLAMVSHMPHLLASILTQVSGGDELGELRMKLSAGGFRDCTRVAGGLPSMWREIIYGN RRNVIEGLTQVEAEIQRVKEILLQEDDGQELEIYLERSREIRGKLPYLTGQIKDN >gi|292596536|gb|ADCV01000012.1| GENE 40 24132 - 25169 1184 345 aa, chain + ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 27 340 27 337 352 191 35.0 2e-48 MSLLQETCGAITGRSLKIEQHIFNSWNAESPVELYGRLVDVVAQYGAATNQEQVTVPKPC MIIASADHGVADMGVSAYPKETTVGMTQNYLIPKGAGANSLANYCGAQMEVIDMGIDADM SWVPGLRSHKLGMGTKNFVEEPAMTREQAVEGIETGIRLVKEKIDEGFNVFLVGEMGISN TTASALMTAKFAGLTAEEVTGRGTNISDERLKLKQRIVHDVLEKYKDISKDDALGILSSV GGFEFACIVGVILGAAANHGLVIIDGFNTSACALVAKTLAPKAMDYVMASHLSAEKAAKS SLENLGLEAYVDLGLCLGEASGSSVQMGMLDLAVHMYMAITGGNK >gi|292596536|gb|ADCV01000012.1| GENE 41 25166 - 26284 1389 372 aa, chain + ## HITS:1 COG:CAC1372 KEGG:ns NR:ns ## COG: CAC1372 COG2038 # Protein_GI_number: 15894651 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 6 356 10 345 352 137 28.0 4e-32 MRTFKIEPLDTQAMETCRFRIDNLTKPIYSLATLETIAERFAGILGDPKPNHLRQGVLVV AADHLVDGPQNDQHGSESYAAIKRFNEGRTATQGAAAKLNAVVYVVNVGLEQDTSDLANI EQQVIRKGSHFFGVEPVISRDELERALELGFTYADKLHRDGLQVVAIGNVGERAFLDSLV TTATITGCAYNDILVHNEWGPTVDERAAHIHSFVDRFNISVDDWSAISESERRDAVLHLL HIAGGLDIAFLTAFILGAASHRMAVVFDNIVTGAAVLAAVTIEPLVKDYVFPSAAYDEPI HDEPIHKEQCRFLGVKPYLDYKLLIDEALGSTMGLSVINASMHMLNDMKTFVEAEVSVAE DGAGKGRQKNKE >gi|292596536|gb|ADCV01000012.1| GENE 42 27439 - 27762 442 107 aa, chain - ## HITS:1 COG:BS_yfjF KEGG:ns NR:ns ## COG: BS_yfjF COG1742 # Protein_GI_number: 16077879 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 107 2 108 109 117 65.0 6e-27 MLLSILFFILAGLAEIGGGYLVWLYMRDDKGPIYLIAGAFILFLYGIIPTFQPEASFGKV YAAYGGVFIALSILWGWLVDGLRPDTYDIIGGLVCLVGVYIIMYAPR >gi|292596536|gb|ADCV01000012.1| GENE 43 27918 - 28817 974 299 aa, chain - ## HITS:1 COG:CAC0768 KEGG:ns NR:ns ## COG: CAC0768 COG0583 # Protein_GI_number: 15894055 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 4 291 1 288 296 191 36.0 1e-48 MKELPTMQELQSFITYNKTGSFTLAAQSMNITQSAFSAQMKKLERLVGVKLISRSTRGSR LTPEGELFLPEAEQVLDTLERAIQSIRLASKVERPILNIGVLRSLGDIRLNGYVSHFFQN HPEFSVSIYDMEEEELMLDLRENRIDIALLYLPNNKDMSAYESTALREDEFVYYAPNLVN GMETASLKAIQQQPLLMYPPKYFMYRTLKNYVGNGQQNLHIRGSRLSNPYTMIDYCQKNK SGCIVARQILSSLNINDGFVPLEKPFKLQVCFAFKKNNSKTETMHTFMDYVQSESPPRL >gi|292596536|gb|ADCV01000012.1| GENE 44 28816 - 28896 69 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFPQLRHKTPMIPITLLIHIVAYYN >gi|292596536|gb|ADCV01000012.1| GENE 45 29115 - 29702 652 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168186545|ref|ZP_02621180.1| ribosomal protein S4 [Clostridium botulinum C str. Eklund] # 1 195 1 196 196 255 65 6e-67 MATRREARFKLCRRFGVNVFGHAKALNRVKKDQRQKKMSEYGTQLLEKQKVKAYYNLLER QFVRYYDKAKKMQGVTGQNMLILLEQRLDNLVYRIGFGNSIRQARQMVNHGHILVNGRRV DIPSFSCKPGDVIELREASRDNEMFKTNFQELRSFELPYIEKDLDGFKATFTRLPQREEL PIEVNETLIVELYSK >gi|292596536|gb|ADCV01000012.1| GENE 46 29776 - 30537 440 253 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794588|ref|ZP_06759724.1| ## NR: gi|294794588|ref|ZP_06759724.1| ribosomal protein S4 [Veillonella sp. 3_1_44] # 1 253 82 334 334 473 100.0 1e-132 MVISRLKKWALCTGLLILFSLSTAIAASIQINNATPMEIKSYILINKELRHPNSTVTLIP QQGVNALQIGSDSSEMIVFNSAKKLRVGLFGEASVKTNRYTYFTISTSLKHLGSEVSYSE NAELYSLQKGGFGVERTSTDESERIILNKIKLHFDGGYTNGYTLSRTKGKKGYPIEKIDP NSPAEKAGLKVGDLIVKVNGQKIKFIKDTNTFNISNNIEAKEKEIVTIASNSGVEKDITL ETGYWNPKTGMFE >gi|292596536|gb|ADCV01000012.1| GENE 47 30732 - 31172 568 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|51894177|ref|YP_076868.1| 50S ribosomal protein L13 [Symbiobacterium thermophilum IAM 14863] # 1 143 1 143 143 223 71 3e-57 MKTTYMANPNTIERKWYVVDAEGKTLGRLAAEVAKVLRGKNKPTFTPHVDTGDHVIVVNA EKIRVTGKKLEQKEYFRHSGYPGGSRFTKLGMMLEKQPERVVEMAVRGMLPKNKLGAQQY RKLNVYAGPEHPHAAQKPEVLEISVR >gi|292596536|gb|ADCV01000012.1| GENE 48 31193 - 31585 525 130 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|121534667|ref|ZP_01666488.1| ribosomal protein S9 [Thermosinus carboxydivorans Nor1] # 1 130 1 130 130 206 77 3e-52 MAVAQYYGTGRRKSSVARVRLVPGTGKITVNKRELNDYFGRQTLELIVKQPLNLTNTVEQ YDVIATVAGGGPSGQAGAIRHGISRALLDVDGELRQSLKKAGFLTRDPRMKERKKYGLKK ARKASQFSKR >gi|292596536|gb|ADCV01000012.1| GENE 49 31971 - 32549 76 192 aa, chain + ## HITS:1 COG:L85237 KEGG:ns NR:ns ## COG: L85237 COG3548 # Protein_GI_number: 15672844 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Lactococcus lactis # 1 188 1 185 188 79 33.0 4e-15 MKKDRLIALTDAVLAIIMTILILELEKPTTPSLQAFWDLRQNFFAYFLSFFWLGSLWMAL NKLWEKVERISQEVVWWNLYLLFFVSFMPYATGIVSSHFMNHTAQLFYGLIVIVSTVGNW FLHKAIDKPNIDQKELLEATAQYRKFLIPDLIIKGVGLILSAIVYPPIMMYSVLIAAFYV ITLKTLSEKKSG >gi|292596536|gb|ADCV01000012.1| GENE 50 32871 - 33662 1189 263 aa, chain + ## HITS:1 COG:SPy1758 KEGG:ns NR:ns ## COG: SPy1758 COG1024 # Protein_GI_number: 15675604 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Streptococcus pyogenes M1 GAS # 1 260 1 260 263 292 56.0 4e-79 MIYNTIQYVVDNGIGTLTFNRPTVANGFNIEMCKEILEVLDKAHNDESVRALLINAEGKV FSAGGDLTEMERAVNEGDTESLFEIVELVAEISMAMKKLPKPVIMSLQGAAAGAAFNMAL AADFVVAANNVRFIQAFVNVGLAPDAGGLFLLTRSIGMNRAMHIVMTGEAVSAEKGKELG FVYKVCELEDLETATRRLVEKLAKGPAQSYRVMKEMMWNSFLAGWEEYKKFEVENQCALG LSEDFKEGVRAFTERRRPKFGQQ >gi|292596536|gb|ADCV01000012.1| GENE 51 33833 - 34588 207 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163781723|ref|ZP_02176723.1| 50S ribosomal protein L13 [Hydrogenivirga sp. 128-5-R1-1] # 9 219 7 197 228 84 29 2e-15 MAQDTIKCYDSPSDVVQALAEDFIAFTNEEINRTETCVVGITGGTVINGLLELLNSPEYI ERLNWERIFFVWTDERFLPQSHEDNYFNRVKPYLLCKAKGAAHFLPINTDSKTVIEAAAE YEKEVKNVLKACKKSGLDLALLDLGEDGHTAGLFAGSHALRVTDQEVVAVEDGKVWERIS MTFSFLAKSDAVWFTVTGESKRTALTKVLYQREDYEDLPWEKRIGRVLPGAVLSQKAMTW YVDKAAYDDVH >gi|292596536|gb|ADCV01000012.1| GENE 52 34625 - 34867 488 80 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1446 NR:ns ## KEGG: Vpar_1446 # Name: not_defined # Def: twin-arginine translocation protein, TatA/E family subunit # Organism: V.parvula # Pathway: Protein export [PATH:vpr03060]; Bacterial secretion system [PATH:vpr03070] # 1 80 1 80 80 122 98.0 4e-27 MGSIGTPELIVILVIALVIFGPGKLPEVGKAIGKGINEFKDAISGPKKAVDETKEAVKKA TTIDVTAGAKNDDKHKEAND >gi|292596536|gb|ADCV01000012.1| GENE 53 34882 - 35190 508 102 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1445 NR:ns ## KEGG: Vpar_1445 # Name: not_defined # Def: heavy metal transport/detoxification protein # Organism: V.parvula # Pathway: not_defined # 1 102 1 102 102 186 98.0 3e-46 MCKDCGCGEDNGVVTKVFTVPGMMCNNCKETVEGASLGLPGVLSAEVDLPEKTATVSFDP TKASVEVITKAIERTGFEVTGVADDVQKHSHGLLGTLKRLFK >gi|292596536|gb|ADCV01000012.1| GENE 54 35259 - 35702 451 147 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1444 NR:ns ## KEGG: Vpar_1444 # Name: not_defined # Def: cupin 2 conserved barrel domain protein # Organism: V.parvula # Pathway: not_defined # 1 147 1 147 147 300 97.0 8e-81 MIRKFDAKNFKWDGIETLVYKQDGSPFKDVTRQVLYDGAYDIPCQFRYFECLPGGYSTLE YHDHTHMVMIFRGKGQVLLGDEIHDVEAGDFIEIPGNTIHQFRANKDDYIGFLCLVNQDR DKVKLLSPEEMEMLRAKPKIKEFLESC >gi|292596536|gb|ADCV01000012.1| GENE 55 35719 - 37122 1648 467 aa, chain + ## HITS:1 COG:CAC1590 KEGG:ns NR:ns ## COG: CAC1590 COG0471 # Protein_GI_number: 15894868 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Clostridium acetobutylicum # 2 462 12 469 476 365 42.0 1e-100 MNTFTRAALTVLVGLVIWFLPHTEAIKPEGWHLLAIFTATIVGFILRPWPTGIMALFGIV VAVATNSITMVQALGGYAEANVWLIVAAVFFSRGIINSGLGKRIAYTLIRSFGTSSLKLA YALACTDLIISPATPSNTARGGGIVFPIVQNISLAFGSEPYGNTARRIGAYLMTTAHTIN TITVTIFLTACSGNLLITSLGAKLFGYDISWWEWFQAGVIPGVICMILMPWFIYKIYPPE IKETPEAAAMAQKELDALGPITKAEISVAIIFVLCILLWATAIWTKLHPTAVAMMGVLAC VVTGSLRWEDILGERTGWDILIWMGTLVGMAGLLGKLGVVAVFADFISQHLAGFDWFWAS FIISATFVYSQYFFASGTARITALFSAFAAILVAMGAPIPFTILLFGLMNSPGCTLTHYS SGVTPIFFGAGYVPQGTWWRVGLAISVVSFLIHFWGGTFGMWLFGIL >gi|292596536|gb|ADCV01000012.1| GENE 56 37335 - 37466 57 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGLVISLLIIALVVIINDIRIMNNNLTRFCLRSSANGLIYNQ >gi|292596536|gb|ADCV01000012.1| GENE 57 37658 - 39328 2356 556 aa, chain + ## HITS:1 COG:PAB0895 KEGG:ns NR:ns ## COG: PAB0895 COG0129 # Protein_GI_number: 14521553 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Pyrococcus abyssi # 4 551 2 548 551 636 59.0 0 MSCRSDNLKTGVARAPHRSLLKALGFVDEEMGRPVIGIANSFNEIIPGHVGLKNIVQAVK DGIRNAGGVPIEFNTIGICDGLAMNHIGMKYSLVTRNIIADSIEATAMATPFDAMVFIPN CDKVVPGMLIAAARLNIPSVFVSGGAMLAGVHKGKKIGLSDVFEAVGKHQTGEMDDAELA DIENTACPTCGSCSGMYTANTMNCLTEALGMGLPGNGTIPAVYSERLRLAKLAGMQAVEV LKANLRPKDIMTREAFENAVALDMALGGSSNTALHLPAIAHEAGVPLSLDDFDRIAQNTP QLSKLSPSGVYFIEDLYAAGGVSAVLKRLAENGRLHTDCKTVALKTQGEIAAAAHVVDED VIHPWDNPVHETGGIAVLKGNLAVDGSVVKAGAVDADMLVHSGPAKVFNSEEEAVEAITG GKIVKGDVVVIRYEGPKGGPGMREMLTPTSMIAGMGLDKDVALLTDGRFSGATRGASIGH VSPEAAAGGTIAIVEDGDIINIDIPNGKLELAVSDDEIARRKAALKPFKSNVTGYLKKYA LHVSSAAQGAIEVFED >gi|292596536|gb|ADCV01000012.1| GENE 58 39371 - 40594 1721 407 aa, chain + ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 1 401 1 401 404 482 66.0 1e-136 MYKLYDFMEARERLSTITVKTKLLHSDVFSDECGNDVYIKPENLQITGSFKVRGAYNKIA KLTEEEKARGVIAASAGNHAQGVALAAKRLGIKATIVMPKHTPLIKVNATKQYGADVVLF GEIYDEAYQKAMELQKEHGYVFVHPFNDEDVIEGQGTIALEVLDELPDADILLVPVGGGG IVSGIAAAAKLKNPRVKIIGVEPEGAASALAALKADHPVPLDEVATIADGTAVRQIGETT LEYIKQYVDEIITVSDYELMEAFLLLVEKHKLVAENSGILPLAGLKKLECRDKKVVAIVS GGNIDVLTISSMINKGLVLRGRIFTFSVNLPDKPGQLVAVSQMLADADANVIKLDHNQFK NLDRFHEVELQVTVETNGEEHIQHIIDTFKHNGYIIKRLNSSEILSE >gi|292596536|gb|ADCV01000012.1| GENE 59 40613 - 42322 1946 569 aa, chain + ## HITS:1 COG:MA3792 KEGG:ns NR:ns ## COG: MA3792 COG0028 # Protein_GI_number: 20092588 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Methanosarcina acetivorans str.C2A # 2 563 5 559 564 600 53.0 1e-171 MSAETINGARIVLETLHRLGVTDMFGYPGGAVIPIYDEIYSFPEIKHYFVRHEQGAAHAA DGYARVSGRVGVCLATSGPGATNLVTGIMTAYMDSVPMVAITGQVGRPFIGKDSFQEADI QGITMPITKHNYLVQDIHDLPRIIKEAYFIAGTGRPGPVLIDIPKDIQTEKISMAEYNKL YEVPIHLEGYDPTYKGHQGQIKKAATLIKNAKRPLIIAGAGVLKSGAMDELKELAEKAQI PVTNTLVGLGGFPGDHELALGMVGMHGSVAANNSTDEADLVIAAGIRFHDRITGHPDFFC KKAKIIHIDIDPAEIDKNVTINVPIVGDLKQVLTELNALVEPTTHEAWLEQIREWQAEYP MVIPESKNGVLHAQYVLSELNKIAKDDAIIVSDVGQHQMWAAQFLTHKKPHTIVTSGGAG TMGYGLPAAIGAQVGAPKKQVILVVGDGGFQMTCEELMMVRQYNLPIKIVIINNGYLGMV RQWQEIFNNRRYSYVDLEVSPNFLKLADAFDLKAARLDNVETFNKEFKSYITSDESIVLD CRVEREDNVLPMIPAGGTISGMMGKKGVL >gi|292596536|gb|ADCV01000012.1| GENE 60 42322 - 42810 708 162 aa, chain + ## HITS:1 COG:MJ0161 KEGG:ns NR:ns ## COG: MJ0161 COG0440 # Protein_GI_number: 15668333 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Methanococcus jannaschii # 1 162 5 167 172 144 47.0 5e-35 MAKEHQVLIIAKNAPGIGTRILALFNRRGFNVTKMTSGITNQPGYARITITVEADDRILD QVQKQIYKLIDVVKVKVFEDHDVVCRELMLIKVKASASTRSQIVQIADVYRGNVLDISPT SMIIEVIGSVEKLRGFIQIMETYGILEIAKTGITAMSRGEKM >gi|292596536|gb|ADCV01000012.1| GENE 61 42822 - 43607 686 261 aa, chain + ## HITS:1 COG:BS_ylmA KEGG:ns NR:ns ## COG: BS_ylmA COG1119 # Protein_GI_number: 16078598 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Bacillus subtilis # 5 258 2 255 264 216 41.0 3e-56 MGRELLHYENVCFRRDGRPILDNVNWHIEDGEHWALLGLNGAGKSTLLSMIPAYQIPTTG TLRVFGKEFGKYAWPKIKARLGFVSSALGQFQSTLDKQVVEDIVISGAFSSIGIYQEVAP EVRQRGMQLLSEFGLDYLEGHRFRTLSAGEQRRVLLARSIMANPELLILDEPCSGLDLPA REQFLRTVSTLVAEQQTPIIYVSHQIEEILSFITHVAILREGKMIHAGPKHKVLTDDILS DVFGLSVQVVWKDDRPWVMVR >gi|292596536|gb|ADCV01000012.1| GENE 62 43749 - 44756 1566 335 aa, chain + ## HITS:1 COG:RSc2075 KEGG:ns NR:ns ## COG: RSc2075 COG0059 # Protein_GI_number: 17546794 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Ralstonia solanacearum # 10 334 3 327 338 415 61.0 1e-116 MAGKILGTTVYYDADCNLSKLEGKKITVLGYGSQGHAHALNLKENGMDVTIGLRGGSSSW KAAEEAGLTVKETAEAVKGADIVMVLIPDELQADVYAQDIAPNLKQGAYLAFAHGFNIHF GKIVPREDINVFMVAPKGPGHLVRRTYQEGSGVPCLYAVEKDPSGDTEEVALAWASGIGG GRSGILETNFKSETETDLFGEQAVLCGGVTELIKTGFEVLTEAGYEPVNAYFECLHEMKL IVDLIYEGGFQKMRHSISNTAEYGDYHAGPRVITADTKKAMEQILADIQSGKFADEFLAD SKNGQKFLKEHREAAANHPIEPVGAELRNLMSWLK >gi|292596536|gb|ADCV01000012.1| GENE 63 44930 - 45391 520 153 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1435 NR:ns ## KEGG: Vpar_1435 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 152 1 152 153 244 96.0 5e-64 MDFYTLAYVESQAVIGQTWGFIIIVAVLLALLILGVQVLRNGFTSRYRDLMIILSLIVVF FLGLEYQEYNRMKTYSEDSSRMAQFLHSFSSDRSVPSDQLAVNSLKIRNGMILKVSDAYY EVQFNPEFSTYTITRVYKVSPIDRIHDKEDALQ >gi|292596536|gb|ADCV01000012.1| GENE 64 45404 - 46123 885 239 aa, chain + ## HITS:1 COG:L163025 KEGG:ns NR:ns ## COG: L163025 COG2323 # Protein_GI_number: 15674091 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 5 214 1 211 211 222 53.0 5e-58 MTEAMAVYGMVFAKLAIGLLAIILQINLMGKGNLAPTSALDQLQNYVLGGIIGAIIYNDQ IGILQFMLVLILWTILVMTLKFLKGNLRIFKAILDGHPVIVIEKGHILTEECMRYGIQAA ELKLKLRAAGVQYVTDVKRAVLEQNGQLNVVQFGEDNIRFDLIDDGQINQFTLDVIEKDR EWLEQEIQAQGYSVKDIYIAEYKDGKVVVYPYERKHRPQIVSTLKSKTNYTKDKLKSKL >gi|292596536|gb|ADCV01000012.1| GENE 65 46244 - 47971 1645 575 aa, chain + ## HITS:1 COG:CAC1254 KEGG:ns NR:ns ## COG: CAC1254 COG1032 # Protein_GI_number: 15894536 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 30 573 36 603 622 347 35.0 4e-95 MNRKDLIDRLQELYKDEDSRVTVNPHAGQKVAIVYPNTYFVGMSNLGLHIIYEEINLRND SVCERIFLPEKKELEAYDKTKTPLMSVETQRPMHQFDVVAFDVTFEMDYFHIPLMLRHGR VPIMGKDRTEFDPIVIAGGPCATFNPEPFADFIDAFIIGEGEGIVSRVLDIIRDGKMEGL DRHAILRQLADISGVYVPSLYVPIYSEDGKFKGYDITEGVPKRIKRHFEMLTSGGETVVA TNYTEFGAMYIIEVARGCGRHCRFCMAGYCFRVPRVRPLDILKEGVERAEKLGKKVGLMG AAISDYPEVDELVNYIRSKDMRYSCASLRADSLTQAVVDGLADSGQKTITIAPETGSERL RRVINKGISEEHLQNAATLSAKSGIQHMRLYIMIGLPTETDEDIEAIVGLAERTQAHMAE VGCKGRLTLSINPFIPKPFTPFQWMAMDNQKTVEKKLQYIKKALQKNRRIEVLVESPKEA YIQGVLARGDRRLGAVIAACAADRGSKSFKSEMKAAGLDMDDMNYRERSFDEFLPWSHLD MGMDEGYLEMEWKRSIDEAYTPPCTQGCKRCGVCK >gi|292596536|gb|ADCV01000012.1| GENE 66 47981 - 48835 789 284 aa, chain + ## HITS:1 COG:BH2551 KEGG:ns NR:ns ## COG: BH2551 COG1496 # Protein_GI_number: 15615114 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 19 278 12 268 273 122 32.0 8e-28 MNQSVKRIDVKGPHGTWSYEAPSWADQFPISMGDTYRHGGVSSAPYESLNLAFHVGDEAQ KVRENRAIVAKYLGVEPNRISCGNQVHGLKAVEITEDLIGAGAFAEDTAIDDCDAVFTNL PHVPLFLFTADCVGVGIYDAKHHAIATAHAGWRGAIGRLPVLTIEAMKEAYGTEFKDCYI YLGPSIGPESFEVDIELGKRFELAWRDMTDRDSSDVVNYPGDKLDKAYINLWNFIGEDLV VNGVPPENITIGGTDSVSEIDCYSYRREAGLTGRMALFAMLQDR >gi|292596536|gb|ADCV01000012.1| GENE 67 49012 - 49698 713 228 aa, chain + ## HITS:1 COG:aq_274 KEGG:ns NR:ns ## COG: aq_274 COG0325 # Protein_GI_number: 15605814 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Aquifex aeolicus # 4 227 5 228 228 177 43.0 2e-44 MIEESLHAIQQRMADAMARVGRVDTALLVAVTKNHPVSAVEEVARLGVTHVGENRVQEAK EKQLTYKGPQLTWHLIGHLQVNKVRQAVPMFDLIHSVDSRKLLDEIEKVAAKHDKIQDVL LQVNVAREASKTGMTVEEFPEIRDYAKTLPHVRVRGLMCMAPFFDDPQEARPIFRVANAL FEDMKRYFEEGQIQYLSMGMTHDFEVALEEGANIVRVGTAIFGERVYY >gi|292596536|gb|ADCV01000012.1| GENE 68 49752 - 50249 723 165 aa, chain + ## HITS:1 COG:SA1032 KEGG:ns NR:ns ## COG: SA1032 COG1799 # Protein_GI_number: 15926772 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 73 145 99 171 187 70 41.0 1e-12 MALGDYLDKAKNLFLGRTDDDYEYDDYEYEDEEEYEAEPTPVATAAPVSGASEFHPRKVG GQSTMTQRPTAMKVVVIEPKVFEDSENITHQLRDMRPVLINFENTDPHEAARIVDFVSGA TYALDGKLEKVGKDIFMCVPVNISIDYNDNESNTTEQNEYSWENK >gi|292596536|gb|ADCV01000012.1| GENE 69 50276 - 51070 983 264 aa, chain + ## HITS:1 COG:alr0488 KEGG:ns NR:ns ## COG: alr0488 COG0345 # Protein_GI_number: 17227984 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Nostoc sp. PCC 7120 # 8 264 8 270 270 171 42.0 1e-42 MLGKTLCIGVGSMGGALLRGALQHGVLKACDTHILVRREEQCKALAEELGVVGFTTLPNV NEYNTILLAVKPQVLPSVLETLKEVPYGTVMISVAAGVTLDTLDAAIPQANWFRAMPNTP ASIGAGMTALAGDDVNTDLGRAVQALFEAVGEVAVVSEADLDRLGALSGAGPGYMFVILD ALADAGVRIGLPRQLAIKAAAQTMYGAGKMALESGNHPAVLRDQVTSPGGTTIAGIGAME KGGLRSSLQDGVVACLARSNELGK >gi|292596536|gb|ADCV01000012.1| GENE 70 51073 - 51858 318 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227509386|ref|ZP_03939435.1| ribosomal protein S4e [Lactobacillus brevis subsp. gravesensis ATCC 27305] # 38 257 37 257 264 127 33 3e-28 MADTSKLIRYFEASGSGEEARRMLDLAEQVVKGRPYRVADFTSPAGLVIADAIKANYPQL TVKTDGGYEGAERIRIAFVDSDFNGTVDMGIRALKVNWDPRFRLLTHRDVLGSLMGLGID RSKFGDVIVQQGGAQIMVDESVADFVIQNFTKIAMVSVSVETIELSDIAPKEEKIKEVRT TVASLRLDAVASSGFSVSRTKLVSAINAGLLQVNWQPAKGASQEVKEGDVISMRGRGRMK VEAITGTSRKGRIGVYLKRFM >gi|292596536|gb|ADCV01000012.1| GENE 71 51916 - 52563 453 215 aa, chain + ## HITS:1 COG:VC1363_1 KEGG:ns NR:ns ## COG: VC1363_1 COG1648 # Protein_GI_number: 15641375 # Func_class: H Coenzyme transport and metabolism # Function: Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) # Organism: Vibrio cholerae # 6 180 7 180 201 82 28.0 7e-16 MVSITFQPTTEDIILFVGGGEVAERRMQLFIEEPCQIVVIAPTVTDTISQWAKGNRITWC DRAFTMDDEEHIISSSLLFICTDNHELNDTLYELGKKHRVWTNRSDDPSACSFTVPSSLE LGDLHIAISANNVGPRINRLVRQDMMNRYGQLQKAMPRLKIFREEVKLLLPTPEARQKFW RDNLTVETFEAILKGEWMIIEEKLNYAISGIRSKS >gi|292596536|gb|ADCV01000012.1| GENE 72 52532 - 53803 1689 423 aa, chain + ## HITS:1 COG:BS_hemA KEGG:ns NR:ns ## COG: BS_hemA COG0373 # Protein_GI_number: 16079869 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Bacillus subtilis # 1 421 1 421 455 305 39.0 1e-82 MQLVVLGLNHRSAAVEVRERFSFDKDEVVAALNRLYEFDCISECVILSTCNRTEIYAALE GVEFPKDYMLAVLKDLKGADHIDADAFFFYEERDCIEHLFRVSASLDSLVLGEGQILSQL KGAYIQAYSAGCTGTIFNILFQRAISVGKKVRTNTGIANTPVSVSYTAVNLAEDSLDKPL SEATVLILGAGTMSELTATHLQAKGVKTIFVSNRTFAKAEMLAERFNGKAVKLDNFVEYA KDADILITSTGAPHYIITEKEAKKITTLRKGEPIVMIDIAVPRDIDPAVADLDGIYLFNI DSLESVVEENKAQREEEARRAEPIIHDAIEELLDKLSYLTVRPMMALLTEKAERIRRREL HRALAKLPDISDKERRIMDSMSRMIIRKMLREPMIHFNEIAGTEEEGLYWDLFKDMFNLE KEG >gi|292596536|gb|ADCV01000012.1| GENE 73 53808 - 54746 1098 312 aa, chain + ## HITS:1 COG:PA5260 KEGG:ns NR:ns ## COG: PA5260 COG0181 # Protein_GI_number: 15600453 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Pseudomonas aeruginosa # 5 309 6 310 313 275 47.0 9e-74 MRDHIRIGTRRSALALWQAEHISAELQRLYPNITVELVHFNTKGDRILEKPLAQVGGKGL FTAELEAAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDKLPQ GARVGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLED QITQVFKADEMIPAVGQGALAIECRADDAEMLDMLAPINDEATRYAVEGERSFLRQLNGG CQVPMGVHGTINKGQLTLKAMIASLDGKTVYEGEISGPAKKGEILGKNLAKALYEEGGKR IVDALIEEGIIK >gi|292596536|gb|ADCV01000012.1| GENE 74 54743 - 56251 1899 502 aa, chain + ## HITS:1 COG:BH1495_1 KEGG:ns NR:ns ## COG: BH1495_1 COG0007 # Protein_GI_number: 15614058 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Bacillus halodurans # 3 249 5 251 252 266 51.0 6e-71 MTGMVYLIGAGPGDVKLITVKGRECIEKADVIVYDYLADAHLLEWARPDAELIYAGKQCK DHTMHQWEINELLVQKGKEGKIVARLKGGDPLVFGRGGEEAMALGEAGVPFEFVPGVTSP IAAPAYAGIPVTQRAMATSFAVVTGHEDPTKAVSGIHWEGLATAVDTLCFVMGVGNLPVI AEKLMAHGRAASTPVALVRWGTKTVQEVLVSTLEHVVEDVAKAQLKAPAIIVVGDVVNLR EKLQWFDNKPLFGKTVVVTRARSQASAFREKLAAQGANVVEAAAIKTSPLELFEEDKRII NNTKQYQCIVFTSGEGVRYFFDALYKEGKDTRALGNSKVAAIGCATARELQKYGIVPDII PVDYKAESAVEALEEELNAGDSVLLIQPKVARDVIPRCLRHRNMNVDILRLYETTQDTSQ QEALVTALTEGTVDYITFTSSSTVTNTIQLLGDNALELLGNTKVACIGPITAATAMSAGL KPAIISDVYTTDGLVNAIVKDI >gi|292596536|gb|ADCV01000012.1| GENE 75 56261 - 57235 1324 324 aa, chain + ## HITS:1 COG:CAC0100 KEGG:ns NR:ns ## COG: CAC0100 COG0113 # Protein_GI_number: 15893396 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Clostridium acetobutylicum # 7 323 4 320 320 388 59.0 1e-108 MYDLTYRPRRLRINPEMRDLVRETTLDVTDLIYPLFIVPGEGIKKEIDTLPGQYHLSVDE AVKVAQEAYDLGVRGVEIFGIPTYKDEQGSSAWDMSQPVQQAIKAIRAAVPNLLVVADVC LCQYTTTGHCGMIDDHEILNDETLPLLCKVAVSQAEAGAHMVAPSDMMDGRVGAIREALD AAGYTNVSIMSYAAKYASAYYGPFRGAVNSAPKFGDRKSYQMDPANRLEAFREIELDIAE GADIIMIKPALSYLDIVRETRDRYELPVAVYNVSGEYAMVKSAAAAGLIDEERLVMETML SMKRAGAKIIITYHALDIAKWLQQ >gi|292596536|gb|ADCV01000012.1| GENE 76 57245 - 58549 1584 434 aa, chain + ## HITS:1 COG:BH3043 KEGG:ns NR:ns ## COG: BH3043 COG0001 # Protein_GI_number: 15615605 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Bacillus halodurans # 6 429 6 427 429 493 56.0 1e-139 MFQLGKSEKAFEEAKRYMPGGVNSPVRSYRSVGSNPPFISSASGSRIYDIDNNEYIDYVL SWGPMILGHANPEVIASLQEAIPRGTSYGAPTLLETELAKKIQAFMPSMEVIRLVNSGTE ATMSALRVARGYTGRDRIVKFVGCYHGHSDALLVKAGSGLATFGVPDSPGVPQGVAENTI TLPYNDSEAVRKLFDDMGDTIAAIIVEPVAGNMGCVPPVPGFLETLREVTKAHGAVLIFD EVMCGFRASSGGAQKRYNIKPDLTCLGKIVGGGMPLAVFGGSREIMNRIAPAGPIYQAGT LSGNPIAVTSGLATLSILQRDPTVFKQVEDTTIALCEGFERLAAQYNVPVVVQRVGSMFT IFFTDKPVKNFDDAASCNEEQFKMFFHHNLSHGIYYAPSPYESNFVSICHKSSEVERTLA VADEAFKKISDTLL >gi|292596536|gb|ADCV01000012.1| GENE 77 58596 - 59057 392 153 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1421 NR:ns ## KEGG: Vpar_1421 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 153 1 153 153 278 96.0 4e-74 MQFYKNLKRARVRMGKSQIEVAKAVGISNAALSNYETGYREPDLDTLCALSRYYGLTLDE LLDVNGEQHEPIYDLSPVLKNKYIAYKGEVFELKDSQKRALLRELDNLFTKFEKSKVEDK DSKPKTYKHGNPHINRAGLASSAGSLTARRNLK >gi|292596536|gb|ADCV01000012.1| GENE 78 59283 - 60035 303 250 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1420 NR:ns ## KEGG: Vpar_1420 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 250 1 250 250 427 94.0 1e-118 MKKICSLILIVIVIISTAIYQYYYHDGSPNDIVILDESHELVDTSIKETVSSRILAVYLD EPYYYFLGYDGIGRYDIRNHMLDVLEFEIYGDETGKHKINYSRSKMIVNKKSKLEDFSKE TLDNFGKMLMNSERGAKYYNKRWYHSGYEATFLDLDKHLIITNDVRGIKETPTKILIFNV SGFIIIDKETNNIQVYFDESIAGKKVRDSLITMLKYTYDNHLTILNSLDEIGEAERTILL QLRDNYINKK >gi|292596536|gb|ADCV01000012.1| GENE 79 60516 - 61280 307 254 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1418 NR:ns ## KEGG: Vpar_1418 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 254 1 254 254 462 95.0 1e-129 MIYFNNKKSLDTFLMVFILGAVKAYRRNYIDLTILEYYIFSMLIRLMCRKAHLSDKLLNI IGDGMSLEDVDEWMARRIPIPALNDTLDDIECSSWIALIERELEGNTLSEALKISTHDEK KFGIYFFTDYVEEIFWALFLLGLYEVLQKTEFISESILSCIKQSYLSEIYTRERIQNEGF QACISNLQEIADTNISGQLSKDLINMKAKLASLQVLLPFYDVSFDKLKTGIDLKATKGMF WQIKVSGEFIDLGL >gi|292596536|gb|ADCV01000012.1| GENE 80 61527 - 61673 130 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282849940|ref|ZP_06259323.1| ## NR: gi|282849940|ref|ZP_06259323.1| hypothetical protein HMPREF1035_0993 [Veillonella parvula ATCC 17745] # 1 48 1 48 48 79 95.0 6e-14 MDRYINKIRDLLIDCMPEHWYKAYLYFASTQTGSMNSAYYYVNIILNN >gi|292596536|gb|ADCV01000012.1| GENE 81 61685 - 62572 512 295 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1417 NR:ns ## KEGG: Vpar_1417 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 295 1 295 295 487 83.0 1e-136 MNIYINKIRDILVDLMPKHWYKIYLYFECSELGSTSGCYYIKTPGGSIIQYGEFIYNFSD ENSERIKQGMYDILTNVRLLHEVSIEKWTWGTMYISRDDYEPHCEFHNDPVSDDYWLQNR YKWEYQNFGVLAREDEFEPDVYKEMLKGPRGILLLEDMESRVLAKNYTAIDKAFKLKHKS LESELEKHYNKVAKSIYKLTPLNWHRAKLHFDMNVDNPSVELFVYKTEYDSYITKYVENN DEEPAIISEVMYDLKNEVLEMIETFKFYNQNPFSGLVYTLTSNGEVSLELTYGDK >gi|292596536|gb|ADCV01000012.1| GENE 82 62729 - 63160 179 143 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1416 NR:ns ## KEGG: Vpar_1416 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 143 1 143 143 234 79.0 1e-60 MNFKTIYSVVWYIFIGCFSLWLICGLGYRFLFNDTVEQSRIELTQALNAAFPRDHYIIDG DVHDSSRKNLLSIAVSINIKKDSLHRDIKLIKPLCGNWTLVDQTETRYVYENQSYRVYVT KDPVNDGYIVVLARNNWLERLHL >gi|292596536|gb|ADCV01000012.1| GENE 83 63184 - 63573 242 129 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1415 NR:ns ## KEGG: Vpar_1415 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 129 1 129 129 189 92.0 3e-47 MKIGLSLFLLGIYCLYFIKNPYFVLEKKQVKRSKSMLYTEIGIGCLVFILINIPYDGANL IHVLAVIGILSWVLELWLRILAIKSDSSLTLEKMPILLKKAKKDFYSVIPIIVIFMLMIL FNVITDNFK >gi|292596536|gb|ADCV01000012.1| GENE 84 63776 - 65473 1636 565 aa, chain + ## HITS:1 COG:RSp0550 KEGG:ns NR:ns ## COG: RSp0550 COG2831 # Protein_GI_number: 17548771 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Hemolysin activation/secretion protein # Organism: Ralstonia solanacearum # 105 565 127 590 590 276 35.0 1e-73 MKVVSIAAGCVGLVGVMCATTTLAADVPSSFIQQEAARADASLRQRAEAPMARAALSRSE SSYDNLNGAPMDALPQEAVSFPIDQIVITSSEPVFKKYRNRLKIYNHNNIGAEGIAVLQK QLQEQILADGYVTSQVVVPNQDLQSGTLTFEILPGYVEDIVLTNPKARTNWQSAFPVRSG YVLRRQALEQGIDQMRNVPGQDVKLSIEPGTKPLHSIVKLTVEQKGFVHGSLILDNAGYE STGKYQDTMYVSFSQLARLNDTLSASITKDIGHHGDGHGSKQYAINYAVPDGNRMYRLST YQYSYHQLVFMPEAFRSSGNTRGIEFSVEQVLNRTSRSKTAAVAKVIHKTRHSYIDDIEI GVQEQHTTALELGLSHRQYSGNTMSDIYLFYRQGIRGLGATVRSWEGVADNPTTLYKMAG LEGEVQSGVRIGHKQGVYTMRFRSQFTNQRLFGTDQFSIGGRYSVRGFSGEETLRGDSGY YIQNEWALPFRRQRITPYIGIDIGHVWGPSTATRIGNTLVGGVIGVRGNIGDAFRYDVSL GTPLKKPDGFTTDTSVWAFRSSYQF >gi|292596536|gb|ADCV01000012.1| GENE 85 65518 - 71427 5611 1969 aa, chain + ## HITS:1 COG:NMB1768 KEGG:ns NR:ns ## COG: NMB1768 COG3210 # Protein_GI_number: 15677610 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Large exoproteins involved in heme utilization or adhesion # Organism: Neisseria meningitidis MC58 # 270 1641 741 2096 2514 332 25.0 4e-90 MKIKQYTATALCAALLATNSGPWIPLAVAQSIVPNQGKMGPTMDEAPNGTPIVNINKPNA NGLSHNQYDMFNVDDKGVILNNSRRPISTELAGYVMGNPNLRGAAAKTILNEVTGTGATA MNGALEVAGRKAHVIIANPNGIAVNNGTFINTSAATLTTGNPIITDGKISGYDVKQGTVT VSGQGLDTSRTSRTDILAEAVQLNGKVWADESHVVTGKNTVSVDGGGKVTNVTKTGNSEQ VGLDVSQIGGMYANSMYLVGTNDGFGVNNKGILSAQNHISVDSTGKVQNSGTVVAPDISI SAKGFTQVGKAKLYADSARISADSFTQTGNAVTKNAPVLIARNNLAVATNTIKNTNGSVL KSEGVLQLGKTMDYNGAIAGKMDALTNVAATIEAGQQGVILAKSIANTNGGVTLKRATTG TTEHIKNEVAPAGSIKRYQLSEERIYDHDDPIPQDKVVVHSSENLQLSINGEHHDSWTKY EYDRTRVKEVVDTSKPGRIISGGNLQIEADVVTNDASQISAAGTLAGKIGHYEALNPKGN EYISENGTATGYSRHKHHGWDSTNIREAEYHNDVVQPIDIPVAVYGSNIANSTTGATVDT SVLTSMSQLSTNPNTTYAMETDPNFTNRRSFLSSDYVINRLQLNPMRTQKRLGDGYYEQQ LVMQAILRQTGRSRLQAGLTEEEQYRKLMDAGLTVMKSKSMMLGQGLTESEQQQLTEDVV MLVSQPVVLPNGKTETLLVPTLYLAPTTQRVEGAANMQAQSINLQVGTMHNRGSIVADDA ITVHGNTIHNDNGLIKGRTTTVVADTDVRNTQGTIEGRERTTVYAKNDVINEGGTIKQTD EKGKLVVVAERDVINNGVKYEASNSKVVWNNANSRRETVTAVDQGQITAKGDAVVTAGRD VAMQGGKVTSDKDVTLVAGRQVNMQSMTANHELEEHRYDKGKSGGGHSQTTETHDLVNEA TSVGSSVEGKNVTVATNDDVALSGSEILAADKVQVEGQNVKLDTASATSTVDHVYKDKKK SLVKRERTDATSVAQVTAVTGSVVSGKDIAIKSSHDVTGQSAKLMGEQSVQVTAVGKVEL GADKNVTKETSTYRHKTSGLMGSGIGFTIGTEKRNIDDTNREEETVRNTIASTKGRVNIA ANDTVHLTSADILSKTGTTIEGAAVTLDGNTDTQHMTHDDRYKKSGLTVALGGAIADSVT NATRTIKQAGGRDDKRLAALELNEARKQLQDGYEAVDSALHGAKIRDAVTGKVEKVDGKA KRGSKNIDNAINLSVSIGSTSQKQGQTVDTATYKGGSVISDGDIRITARDTKKTGITLTG ESVSAQSISLASASDINLEAGKNTVDVKNDYKSSGWSAGASISLTGGGLLDINASAHMAR QNGDTHQESYVPTKIKAAKLAQLKAKRDTNIIGSTVAGKKVEVDTGRDLHIQSLQDVDNF KEHSKSAGFSVSSKPTFKDPTGSINASVGRIDSKWKSVTQQAGILAGEEGYDINVGNSTT LEGAVIKSDAPKVKNKLTTKSLEMKDIQNEAEYTYSNNGIGYNYYGSKKKLEEMKTNDKK GYDKIYNSIGLVPNLGVGSKGKASSTSQSAISDGILTVDGKEIDTKTINTNTENTLHQLD KIFDKKKIEERQELARLFSKNAYEQLHNWQPTTKDGKVAKSIAHGIIGELSARMAGNAPG SGFKATMTNELLIGEIKKVAKHDPALAQWLSAAVGGVVNKVTGGSVNTGAAVTSYATKWN DESGVKSSLEEAYAAIDRDILDEINKQEYDDLNFLSKSIIKGTQIGERSDLLASIFGKHS PNYSVAVALYKHALYGDGEKQYFPLGTGASQLISNHSSFINGVKEKSADLSVGESKVQYF VIKTDGNAKAAFGKLKIGVRMTKISEDKVHVVGQAKDMYNFEWLPDYDSDIPAVPPAEFS VDYIAKLLSIAEDTSKQSALIAANNIAYLEQRAGIIKPYKYGIQIDTVI >gi|292596536|gb|ADCV01000012.1| GENE 86 71450 - 71917 358 155 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1412 NR:ns ## KEGG: Vpar_1412 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 155 1 159 159 180 71.0 1e-44 MKYILGIFIGIVLLIVGSIIYIGESNSYKYEPRYFLGYSKGENYILDTQTGVTLEHNGYS YEAQSDYLYSYGKTGFLKLDLNSGQTHYLFDDQTDEIYKNNILNRCLIEKREQKPTLTYI WSNKNDLTLEEQDVYNQLKDKKMRYPNRSIIVKVK >gi|292596536|gb|ADCV01000012.1| GENE 87 72176 - 72919 349 247 aa, chain + ## HITS:1 COG:CAC0328 KEGG:ns NR:ns ## COG: CAC0328 COG1451 # Protein_GI_number: 15893620 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Clostridium acetobutylicum # 8 242 27 256 259 100 27.0 3e-21 MNTSITRSITYNGDIIEYELTIKRVKNMNMRITKDGVIHVSANGYVPDYRVDKFVIENMP FIERARYKIDALNAKRVDALQYVNGESLSILGIPVTLRLVEQDGKPHIGFDGKAILTMVV PQGTTFEAKHKLMQSYWRNLGEKVFVHWAKVVYQRFQKQHIDVPMPTIKQQRMKSRWGSC TPAKQLVKMNTRLLEGPQAYIEYVMVHEFAHFKYLDHSKNFHNLVAQFLPDWKARKKSLN VYFAHRP >gi|292596536|gb|ADCV01000012.1| GENE 88 72932 - 76339 3638 1135 aa, chain + ## HITS:1 COG:CAC0516 KEGG:ns NR:ns ## COG: CAC0516 COG0587 # Protein_GI_number: 15893807 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Clostridium acetobutylicum # 4 1134 11 1166 1167 943 43.0 0 MQPFVHLHSHTEFSLLDGISRLPDMVRRAKELNQPALAITDHGNMYAAIYFYKECMAQGV KPIIGCEVYVTEHSRFDRPEGRSRERLKHLILLAETMEGYRNLVKIVSKASTEGMLYRPR ADRDLLRQYSKGIIALSACIQGEIPQYILQDNMEGAKRSIEWYIETYGKDNFFLEIQNHG LPEEAKAQEELIKLSKEYGLGIVASNDFHYVLKEDADAQDIKVCISTGRRRAEVDRLKFP NDEFYLKSGDEMADLFGHIPGAIENTLKIADRCNVEFNFDEHHLPHFDVPEGETSKTYLR KVCEREIPRLYGETSEELQKRLDYELDVIGTMGFEDYFLIVWDYVRYAREHDILVGPGRG SAAGSVVAYLLGITGLDPLKYDLLFERFLNPERVSMPDIDIDFCYEKRGQAIEYVTRKYG QARVSQIITFGTEAARAVIRDVGRVLDLPLAEVNRIAKMIPNELGITLDKALQGKDLKAL YESDSNVKELFDFGKKLEGIARNSSTHAAGVVISADPLDDHVPVQNANDEGFVTQYDKDN IEELGLLKMDFLGLRTLTVMGDALKLIKANRGIDLDLDAIPLDDKAACDLLTKGDTSGVF QLESEGITKLVMDLKPEHFEDLIPLVALYRPGPLGSGMVADFIDRRHGKKEVTYLHPILE PILKDTFGVILYQEQVMQIASAMGGFSLGQADLMRRAMGKKKESVLKAQRESFIQGSINN GIEESVANEVFDLLVYFAGYGFNKSHSAAYAYIAYQTAYLKAHYFPEFMAATMTSFMQNM QKLTYYINSCKKHNVKVLGPDINYSERSFAVQDDAIRFGLGGIKNVGDNAIDRLIRERNE HGLYTDIVDFCKRVDNRVVNKRLLESLIRCGAMDGFQENRNQLLHMYESAQAVGAKEQKD AAMGTMSLFGDMEEAVEFIPVPNVEDLSEDDKLKDEKEYTGFYITGHPLQGYAKELEGLF ELGALVENPEQYDGQTITFGGLIENKSDRMTKRNELMSILRIEDYSGAANVVAFPKVFSQ SQQFLAVDMIVKVKGRVDADEKGVQIIADRITPLKVNYNQAKQVAIHIYSQYDTPENSEA LKRVLVNTAGSVPTSLYLHRQRKRINLPPNMCFDPSDESIKAIEAILGEGSVEVQ >gi|292596536|gb|ADCV01000012.1| GENE 89 76514 - 78262 2432 582 aa, chain + ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 1 470 1 472 473 471 55.0 1e-132 MKRTKIVCTVGPGTDKFGILEDMMRAGMNVARFNFSHGSHEEQAERMQMVRDAAMIVNKP IALLLDTKGPEVRLGLFKEGKVFLEAGQPFTLTTDDVEGTKELSSVNHKGLTGDVSVGDK ILLADGLVTLTIDAIEGNNIITTVQNSGEIGNRKRVAVPGVALSLPPVSEQDEADLRFGC QQGVDFVAASFMQRGKDIVAIRRILESEKKDIKIIAKIENAEGVKNIDEILEVADGLMVA RGDLGVEIPAEEVPVLQKMMIEKCNNLGKPVITATQMLESMIQNPRPTRAEASDVANAIL DGTDAIMLSGETANGSYPIEAVATMTRIAEVTEKAAIYDSYSRAREDEEMTTTSAVCLAS VRVAQNLGAAAILTCTESGHTALSVARHRPDCKIIAVTPHEETIRRMQLCWGVEAIKGHE IINSDEMVKQAITGALGTGAIESGDLVVVTAGVPSGATGTTNMIRVHIAGRVLLSGNGIL RKSVTGNVYIAANHKGNYESFKDGDILVVGTIEPELMAIAKRAGGIIAVEDGYTSDSAIA GITYGIPVILGAKNAHEVLLEGQEVTIDGERGKVFAGIANAR >gi|292596536|gb|ADCV01000012.1| GENE 90 78298 - 79041 1002 247 aa, chain + ## HITS:1 COG:STM0807 KEGG:ns NR:ns ## COG: STM0807 COG0670 # Protein_GI_number: 16764170 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Salmonella typhimurium LT2 # 9 247 5 234 234 99 33.0 4e-21 MNPYNVTGPTAAEVAQVESIVSQRLKGSFLWMVVGLLTTIGVGFAALVNPNWLRFAYQNF NIILLVELGVVFLFSARAYSANVMTLRGMFFLYSALNGLTLTLVSLRYNVFDVVIPALIG TLAFFIGFAVVGATTKRNLSSLTPYVMAALFGMIIVSLVMMGARFFNWTVLSGFSDTVSL VLGYVGVVVFSIFTAIDVNRIKNNVTQVALMEDETILDRIEITGALSLYLDFINLFLSLL RIFGNKR >gi|292596536|gb|ADCV01000012.1| GENE 91 79055 - 79966 771 303 aa, chain + ## HITS:1 COG:BS_yraN KEGG:ns NR:ns ## COG: BS_yraN COG0583 # Protein_GI_number: 16079740 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 284 1 282 289 194 35.0 2e-49 MDDREWQTFVTVVDEGNITRAAEKLFLSQPALSYRLRHMEKALGHSLLLRTAEGIALTAQ GEIFYDYCKRMMQEEEALEHAMNSASGKIQGTLKIASSINFADYELPALLRAFREQYPDV HIQVKTAFSHQVVKMFNTGDCMVAFARGGYDVSGKSELLLAEPYCLVYKELVPPESLVKV PFIKYQTDASVANIIETWCAEHFDEPPSVAMDVNSMSTCRHFVRAGLGWSILTYMGLGSC KDKDIYVSPLRSKNGEYITRDTNMVYTKDSENLIVVKTFIEHVRNYYKEHTVVDNSILRE YKS >gi|292596536|gb|ADCV01000012.1| GENE 92 80352 - 81755 1903 467 aa, chain + ## HITS:1 COG:YPO0081 KEGG:ns NR:ns ## COG: YPO0081 COG0471 # Protein_GI_number: 16120432 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Yersinia pestis # 1 467 1 474 475 480 53.0 1e-135 MKDKLWRVGVMAAIVAITWFGGTPDGLKPQVWQLFGIYLATIVGLVLKPFPVPITVLLGV ATSSILLSNTKDVLAGYSNTALWLIFAAFALSVAFGKTGLGHRIAYYLVRAFGSTTLRLG YVTAFLDLILSPATPSNTARAAGIVYPINLSIAEAVGSYPGETAKKAGAYLLQNGYFATK VTSFLFATAMAPNLLALDFITKLTGVSLNWGQWALAMFVPGFIMLMCIPFIGYMYERPSV KEIDNKKIAADGLAELGPMKASEKGLIAIALLAITGWILPTFGIKIDATAVAIVAMIATF VCGIITWDDLLKTKAAWNTLIWFGGILGLSSALTKGKFFEWLAKFLETHMNFGLDPFMML ILISVISVAVRYFFASGTAYISAMLPVFLIVGINAGIDPTLLAFILIGTNSYGGSVTHYG AAPGPIIFSAGYNNVKDWWTVGLISAVVCLVLNYVIGIPWWKIAGFM >gi|292596536|gb|ADCV01000012.1| GENE 93 81878 - 82147 496 89 aa, chain + ## HITS:1 COG:FN1378 KEGG:ns NR:ns ## COG: FN1378 COG3052 # Protein_GI_number: 19704713 # Func_class: C Energy production and conversion # Function: Citrate lyase, gamma subunit # Organism: Fusobacterium nucleatum # 10 89 9 89 94 58 43.0 2e-09 MAQLVKAAQAGFDEKNDALVTVEPIASGIEIELTSKVMRQYGDQIKSVILNTVKEAGYDG VKVTVQDKNAWDYTIKARVLGALERGSKA >gi|292596536|gb|ADCV01000012.1| GENE 94 82147 - 83112 1411 321 aa, chain + ## HITS:1 COG:FN1379 KEGG:ns NR:ns ## COG: FN1379 COG2301 # Protein_GI_number: 19704714 # Func_class: G Carbohydrate transport and metabolism # Function: Citrate lyase beta subunit # Organism: Fusobacterium nucleatum # 18 311 2 295 296 279 51.0 4e-75 MANDKTFPEVKTNPLTEAAKKRLSRSMMFVPGNTPKMINSADIHGADSIMIDIEDSVPIT EKDTARLLTAEALKSRKFRAETVVRINHPTQTPYGYDDLDVIVPAKPDMIRLPKTEDVSE VEIVAKKIEEVEKANGWPEGTINIIVAIESVRGLYNVREICHGPRVVAIALGAEDYRADL RTGKHKPAVELLFARQTILHAAREAGIRVIDTVFSDVKDPQGFREEVEFIKALGYDGKSC IHPSQIKIIHEVFTPDEKEIAHSVKVLNSYADALRNNKGVISVDGKMIDGPIVVRAQRVV DKARAAGIKVELEEGAEYDVK >gi|292596536|gb|ADCV01000012.1| GENE 95 83102 - 84649 2311 515 aa, chain + ## HITS:1 COG:SPy1189 KEGG:ns NR:ns ## COG: SPy1189 COG3051 # Protein_GI_number: 15675158 # Func_class: C Energy production and conversion # Function: Citrate lyase, alpha subunit # Organism: Streptococcus pyogenes M1 GAS # 3 511 4 507 510 490 51.0 1e-138 MLNKVGRDIPTNIPALEGREVYQGEFVIEPKVHRAGKPVHMSRVGTNKVLASIDEAIEKA GVKDGMTLSFHHHLRNGDYVMKMVMERVQAKGIKDITIASSSLSPCHEFLVEMIQDGTVT AIETSGLRDRLGKFLTQNPGVLKRPVVIRSHGGRARAIESGEVHIDVAFMGAPTADPRGN ATGRMGKSACGALGYAKVDSHYADTTVIITDNLVDYVHNYAIPQTDVDYVVEVESIGDPE GIASGAVGFTKNPIQIKIAELAGEFLDQAGIIKDGFVFQLGAGGAPLTVAKFIAEKLRKR GEVGGFAIGGATGILTGMLEEGLIRAIYDTQTFDTTAAASLDKNPAHIEMSASMYANPWT DCTTNYLDVVFLGATEIDLDFNVNVMTDSNGVLMGASGGHSDTAAGAKCTVITCPLIRGR LPMIRDKVATVITPGSSVDVLVTEYGIAINPARTDLIERFKDSNLPIYTIEELQQLAFDL VGKPQDIPVSDKDEDIVAIVEYRDGSILDVVRKPL >gi|292596536|gb|ADCV01000012.1| GENE 96 84898 - 85401 345 167 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1398 NR:ns ## KEGG: Vpar_1398 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 166 1 166 166 99 34.0 6e-20 MYRCIANLEINLEGLSEFYSDVSEYETLNMYQIISAWLQDDLDGPNPEKTVFGVSEYALD WMSVLPGDTSYRNLFDMGNCKLGNHSESIDYLYARFLQTLENNKTFELEYESLSLDYIIV MPQYIDITLTCSRNIDYLLFMKQWLRNCSTYKHLIYYKVKDIFYIMF >gi|292596536|gb|ADCV01000012.1| GENE 97 85417 - 86292 1051 291 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1396 NR:ns ## KEGG: Vpar_1396 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 291 1 291 291 518 85.0 1e-146 MTQVFKQDLTDDSVRPGGLFFVELLMPKQCDMPNRDTMVEVFTKHLGPVDCFSYGVESAG FAPQNYKVHYEDNDADIPPTLMVTNCEKIDKPVLDDFERSQVWDCPNVDELLDECQYRVF ATDMLASGLEPKERADMLVKYVDALLELYPSCKAVVFGPSRKFLSRETIENHPDKAVTRF IYYAVNVRYFSIQGTDDMMVDTLGMSTLFYPDLQYHFHGMNPDEIVNHAYSVLYYIFEHD NPIDDGQTIAGLENGDMNPDIKWAVQYEDSLIQPVRTVIDINMGEYASGTR >gi|292596536|gb|ADCV01000012.1| GENE 98 86321 - 86677 337 118 aa, chain + ## HITS:1 COG:sll1163 KEGG:ns NR:ns ## COG: sll1163 COG1917 # Protein_GI_number: 16330416 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Synechocystis # 1 104 19 122 135 69 32.0 1e-12 MNDQRVFDMELVKVESLEKAVRTPFYQTDSTGGSVWVIKPGQTLPKHYHHNSDDIWVILQ GKGVFYPTPDTEVPFTKGQVIVSKKGECHGAKNTGTEDVIFVSIVAPVPADYDPVSTN >gi|292596536|gb|ADCV01000012.1| GENE 99 86919 - 88232 1648 437 aa, chain + ## HITS:1 COG:RSc2352 KEGG:ns NR:ns ## COG: RSc2352 COG0477 # Protein_GI_number: 17547071 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 8 429 16 436 442 247 36.0 3e-65 MNSSTPEPQSGAIDFKDFTKRRMLHVVLPLFIVSIIAFLDRVNIAYAGLTMKENLPWLTP EVFGMGAGIFFIGYVLFEVPASLIAARCNAMHWVARIMFSWGLVCILMTTMTTELEFYIY RFLLGLCEASLYPVIYSLLIPNWFLPKERAKAISLMLTSLLFSNIIGGPLAGILLDTTFF GLHGWRTLFIVEAIPAVIFAFIFAFWMKERPEHASWVTDVEKVYIKAELEKEEQQKQAVK KYTIWQALKDPKVLRLALIYFLWVIGFWGFSFWMPQVLKSLSGWPPSVVAWSIAIPMTAA LLVQIYCGYSSEKRNEKCWHVATTLFIGTIGFLATPHSPSPEVSLFFICLTAVGVYGGMG VWWTMPTTFLSGAAAAGAMGLINSSGNMGGWVGPYMLGFINGHTGSFAYGYYVMGACMFL AGLLILTLPKSMEHKED >gi|292596536|gb|ADCV01000012.1| GENE 100 88379 - 88996 181 205 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1393 NR:ns ## KEGG: Vpar_1393 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 205 1 205 205 353 96.0 3e-96 MKECRPKFDEITSFDEFKKYYWYRDELSQICKSLGLEYRGTKQELNHIIEQYFKGDLIKK SSIKNRRRQVETITLDTPLLECNFSFNTKFREYFSDLIGVSRFKFNADMATAWRKVKSEK NISFTIGDLLKVYYGESDYAKYDNSVCQWNQFFKDFCADESSGNYSNKLKVASIIWKEVR DSKNEKIYSKELLSEYAYKLEAYRK >gi|292596536|gb|ADCV01000012.1| GENE 101 89146 - 89574 491 142 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1392 NR:ns ## KEGG: Vpar_1392 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 139 1 139 139 225 98.0 3e-58 MNKPSGLASKLRALLKAKEAPMWGVIIVLVIVIIFQQIQISELQWRVDEDHDGSTIDSVA GRLYILEGMANKHSDQLDEILKDIRQLQNDGAKYDWELKQLQWLHPELKVQPPEANPRPF KSTDLNLDMNPGKVPDVTKQNQ >gi|292596536|gb|ADCV01000012.1| GENE 102 89574 - 90497 852 307 aa, chain - ## HITS:1 COG:BS_ywbI KEGG:ns NR:ns ## COG: BS_ywbI COG0583 # Protein_GI_number: 16080882 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 299 1 295 301 243 43.0 4e-64 MDFHHLKYFVEVADQKSFSKAARNLHISQSAISRTIKALEDELGVVLFMRNAKSVELTDG GTIFLTHAKRVVFMFEHLKTDFENEFRLEQGSIRIGIPPITDAPIFAQLLGEFKKVYPQI ELELYEQGSKKVEISVQEGLIDIGIICTKPNPKEFESFYLTSDPLSVIIPKSSPLAKEKE IRLEMLADESFVLHKDDFNLHDEIIKACKHTGFQPHIVFETSQRDLMLQTVSANLAIALL PSRLCPEVGENTEVGSKVVVRPLVPEIIHTLYVIWKKGHYLSHASRLWLDFVNSKLPLPG LQLEDRQ >gi|292596536|gb|ADCV01000012.1| GENE 103 90884 - 94420 5166 1178 aa, chain + ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 3 413 2 411 413 558 63.0 1e-158 MSRKFKTMDGNQAAAHVSYGFTEVAAIYPITPSSPMPEHIDEWAASGRKNIFGNTVQVVE MQSEAGAAAATHGSLQAGALTTTFTSSQGLLLMLPNLYKVAGELLPGVFQVAARALAAHA LAIFGDHQDVMAARAAGCAMLAESSVQEVMDLSAVAHLTAIKTRVPFINFFDGFRTSHEI QKIQIWDYEDLKPLVDMDAVKAFRKNALNPDAPVTRGTAENPDVYFQHREASNKFYLNVP DVVEHYMNEVNKLAGTNYQLFNYHGAPDATDVVVTMGSSAQVVESTVDYLNKLGRKVGFI NVHLFRPFATDRLLKALPKTVERIAVLDRTKEPGALAEPLFLDVQAAVVDGGRNVKVIAG RYGLSSKDVIPADIVAVFDNLAAENGKKFFTLGINDDVTFLSLDRAEGVEVETPGLTECK FWGFGSDGTVGANKSAIKIIGDHTDMYAQAYFDYDSKKSGGVTMSHLRFGKNPINLPYLI TEPQFVACHRQSYVHEYDLIRGIKKGGTFLLNCTWSPEELDEHLPAKLRRQIAEKELNFY IINAAKIASEIGLGGRINMVTQAAFFKLTEIIPVDDAVKYLKESVVTSYGKKGQNIVDMN NAAIDQGVNALVKVDVPASWKDAVDDGNHAVKPGCESCPSFVQNIAQPINAQAGYDLPVS TFSGYEDGTLPAGTAKFEKRGPALFVPKWLPENCIQCNQCSFVCPHATIRPILATEAEVA AAPEHFDTIPALGAKDLQFRIAVSPLDCLGCGNCVDICPAPKGKAIVMTSIDTEIEQAEA WNYGVNLPVKENPMKKETVKGSQFEQPLFEFSGACAGCGETPYAKLLTQLFGDRMMIANA TGCSSIWGASMPASPYTTNQQGHGPSWANSLFEDNAEYGYGMYIGVKKIRQQLVELASKA VETATGELKEALEQWIEFANLGAATRQRSERLVAAIEAEGATTPELKEILEKKQFLIKRS HWIFGGDGWAYDIGFGGVDHVLASGEDINIFVFDTEVYSNTGGQASKSTNVAAVAQFAAS GKRTKKKDLGMMAMSYGYVYVAQVAMGADKNQLMKAVAEAEAYPGPSLIIAYSPCINHGI KAGMGKAQEEQRKAVAAGYWDLYRYNPQLKEEGKNPFSLDSKEPTESFQDFLKGEVRYAS LAKAAPDVAEELFAKTEQDAKERRLSYVRLQKGFEDVK >gi|292596536|gb|ADCV01000012.1| GENE 104 94678 - 96294 1895 538 aa, chain + ## HITS:1 COG:NMB1270_1 KEGG:ns NR:ns ## COG: NMB1270_1 COG0500 # Protein_GI_number: 15677138 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 18 261 45 286 287 196 43.0 8e-50 MAKDNTQMTTEDMQQTIYKELGYKSYPFPFTTPAYLEAYGALVGLNTPPAKTARVLELGA TYGGNIISQAVFNPEATFVGIELSQDQVEKGNQIISDAKLDNVSLIQGNILNFEESMGTF DYIIAHGFYSWISDEMKDKLLNIISSHLADNGIAYVSYNTYPGWHTMEEVRQLMLFANRG QDKLTHKEKVLRGKTVGSLVGAQILNYDNLKERNSKFLGALRSIMQKDDYYVGHDHLEPH NDPCYFYQFNDHLKAHDLAYVCDADLTLSMVRTYDESIAAKLEQLAPNSQVDQEQYLDFI LDTTFRKSIICKASVAKDINFAVANPAEVNTIPVRTIVNSFVFQILFDEEALEMFENELV RDTFQALIKDGGTFNMIEALAILKAAHEAANASDDELEHAVCSLYKAVVEHMVRGGIRFY KTFPVKEEYMEGLSYIPARFTNFVKAIVHGGSEYMYGADMFNDAIGDISEEDLLFMELLN KPKAKSTVIKKIKDALFSADPSQPTKHQNAMAEAFYNELTTRMEHLGFVRSKKTGSIS >gi|292596536|gb|ADCV01000012.1| GENE 105 96655 - 97683 787 342 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1388 NR:ns ## KEGG: Vpar_1388 # Name: not_defined # Def: transcriptional regulator protein-like protein # Organism: V.parvula # Pathway: not_defined # 1 342 1 342 342 670 98.0 0 MASKKAVLVYILEILKDETDANHTLSQEEIRSILAERYEVSVDRKTLGRHLNDLYESGDF SIQCEESAVGADGTIRRTDFYMIHTFEDSELRLLIDGILASRHITASQRKDLIGRVAKLG SSYFKPHGIDIESNTGYLHRSQDLFLNIDLIEEAIQKGRKISLAYCQPDVDKRLHINLGP DHKERKYVFNPFQLVMNRGHYYLVGNHESYDDMSTLRVDRIAHITVLNERRKPLREIKGY QQQRTFNVSQYVKEHIYMFGGESITVTFKARRSIVNQILDWFDGNVEFTNITADNVVCRV RVNHDAFKYWALQYMQSVKVLSPASLVAEVKEAIEEGLHQYS >gi|292596536|gb|ADCV01000012.1| GENE 106 97731 - 99218 1626 495 aa, chain - ## HITS:1 COG:MA0003 KEGG:ns NR:ns ## COG: MA0003 COG0591 # Protein_GI_number: 20088902 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Methanosarcina acetivorans str.C2A # 1 486 1 486 514 475 54.0 1e-134 MTQDNLMIIIAFALYLGLMMYIGVYYYRKSNSIGDYILGGRQLGPWITALSAEASDMSGW MLMGVPGLAYTTGISGVWIAVGLTLGTWANWKFVSRRLRNHTEVASDSLTLPDYLKNRFH DQSHSVAVISALFILIFFLIYTSSGFVAGGKLFNTIFGLDYTVSLFITAGIVVFYTFLGG FLAVSWTDCIQGALMFFAILAVPITAAMYMGGPIETFQLIQHEFPQGLSLFGNPSDWFTW AIGLISSLGWGLGYFGQPHILVRFMAISDAKELKKSTNIAMVWVILSLMAAIAVGLIGHV YMLPDKLVGTDAETIFLIMTERLFTPFVAGLIWSAVLAAIMSTASAQLLVTASAISNDFY ANIIHPKASDKELVLVSRIVVLLVALIAIYMAMDPDSYILTMVAYAWAGFGAAFGPAILF SLFWKRMTRHGCIAGIVVGGLTVLIWKQFGFFGLYEIVPGFILSSIAIYIVSLMGKLPPR SVLKDYREAEKMHVL >gi|292596536|gb|ADCV01000012.1| GENE 107 99535 - 101403 1489 622 aa, chain + ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 26 620 8 588 714 573 46.0 1e-163 MEQQVGGKQDVSRQHQVVTKQQALRMLETYFGYTSFRPAQEAPIASLLRNEDVIGIMPTG AGKSICFQIPALCKEGLTIVFSPLISLMKDQVDGLLVQNIPAALINSTLTQSEFNKTMYE VRSGKIKLLYIAPERLSSNFFCNVLRALPIAQVIVDEAHCISEWGHDFRPSYRLIGEWLN SLPKRPIVGAFTATATKYVENDIKKLLGLDKANVYVTGFDRPNLSFSVIRTPKRMDYVVH YVRQHANENGIIYCATRKDVDRVYENLTRAGIKAGHYHGGLNDEVRREMQNAYADDKLQV MVATNAFGMGIDKSNVRYVLHYQMPRNMESYYQEAGRAGRDGAPAECILLYSGQDVQVHK YLIEQSIETPERQNVELRKLQFMIDYCFCSNCLRKYMLNYFGESTVWTTCDNCSSCKGSA DKVNVTKEAKAIFRAIMGTDERYGASMITSIVRGERTDRIMRAGHDALPVFGLLSNVDEK SIKGLIQQFVASGYLRSSTGKYPVLSLTAGAEEVLAGHKEVEEIRQQVFVPSRNSKSAAS VVRGKSSSTSGGLFEHLRQHRKRLAEKAGLRPYLIFPDTVLIDLANLRPTTLGEFGNVKG VGEAKLKKYGLTFLQAIAEYKG >gi|292596536|gb|ADCV01000012.1| GENE 108 101529 - 102320 975 263 aa, chain + ## HITS:1 COG:CAC3003 KEGG:ns NR:ns ## COG: CAC3003 COG0207 # Protein_GI_number: 15896255 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Clostridium acetobutylicum # 1 263 1 263 263 384 69.0 1e-106 MSLADTQYLGIIENILDHGIYGQNRTGIATYKLPQQIMQFDLQEEFPILTTKFVAFKTAV KELLWIWQMQSNDVRKLQEMNVHVWDEWMREDGTIGKAYGYQIAKYKQLDKLIKTIKEDP DSRRMIVTLWNIEDLEDMALQPCAYETLWDVGDGYLNCMLIQRSGDMGLGVPFNTAQYAA LQCMIGQVTGLKPGKFTHVINNAHIYENHVDALREQLARREQALPAPKIIVNPEVKDFYD FTPEDITLDGYEHLGKLSMTVAV >gi|292596536|gb|ADCV01000012.1| GENE 109 102452 - 102946 619 164 aa, chain + ## HITS:1 COG:BH3450 KEGG:ns NR:ns ## COG: BH3450 COG0262 # Protein_GI_number: 15616012 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus halodurans # 1 162 1 161 163 151 46.0 4e-37 MLALIVAVAHNRVIGKDNTLIWHLPNDLKFFKEKTTGHVIIMGRKTFESLPFLLPNREHW VITRDKGFDAPEGVKIFHNPEAAAEAARALDAAYVIGGAQVYEAFLPYVDTMYITEVDHE FDGDAFFPEFSEDAFTIESVVDGIVDEKNQYPHRFVTYRRKAAK >gi|292596536|gb|ADCV01000012.1| GENE 110 102943 - 105258 180 771 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|191638372|ref|YP_001987538.1| 30S ribosomal protein S1 [Lactobacillus casei BL23] # 589 762 252 403 439 73 30 3e-12 MSERMFALIGSELNVKPKQVQAAVELLDEGNTVPFIARYRKEVTGELQDEQLRTIEERIK YLRNLETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPYRPKKRTRAMIARER GLEPLADMIINDTVTSGDPLEIAKEYITEEVPTPEDAIQGASDIVAEIVSDSADFRAYLR KKMWNEGFIQAELSGEEEEQQQFLQYAEYAEPVRQMPSHRILAVNRGEKLGALKLALTVP GDTYIAYMLQKLEKNPKSIFAEYKAAAVADAYKRLIFPALEREIRNELTEKADEQAIKVF GVNLKNLLLQPPLAGHVIMGLDPGYRTGCKMAIIDQQGNVLDYGAYYLTNSEKLRKEAQK VLADKIRKFKVTLLSIGNGTASYETEQFASTMIEEEKLDCHYIITNEAGASVYSASKLAI DELPELDVTIRGAVSIARRVQDPLAESVKIDPKSIGVGQYQHDVNQKQLTHTLDQVVETV VNHVGVELNTASPAILQHVAGISSAVAKNIVAYRQENGVFKSRKELLKVPRLGPAAFTQC AGFLRLQHGKNPLDNTSVHPESYELAERIIGELGFTLKDLQDKAQLEVLQVKLPLVDAEK MAAKLDAGVPTVRDILAALAKPGRDPREDLPAPLTRKHVVSLEDIKVGTIVKGTVHNVVD FGAFVDFGLKTNGLLHRSELCNSRQHPSDVLAVGDIIEAQIISVDVKRNRIGLSVKALQP EKPKNNDNNRNRNNNGQRRNNDNRNNNRNNGGRQNENHNNGSRNNGSLRNS >gi|292596536|gb|ADCV01000012.1| GENE 111 105517 - 107001 1992 494 aa, chain + ## HITS:1 COG:FN0454 KEGG:ns NR:ns ## COG: FN0454 COG1012 # Protein_GI_number: 19703789 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Fusobacterium nucleatum # 5 491 5 491 491 629 62.0 1e-180 MSLNLKERYGLLINNEWVKASDGAEFNVYNPANGEQLAICAEATNDDVDKAVEAATEAFK TWKKVSQVERADYLLKIADAIDAHKEHLAQVETYDNGKPIRETLNVDIPLGADHFRYFAG VLRSEEGSAQVFDENTLSLIVREPIGVVGQVVPWNFPFLMAAWKLAPALAAGCTVVIKPS SHTSLSLLELGDILKEILPPGVVNIVTGKGSKSGQYILDHPGFSKLAFTGSTEVGLDVYK AASERLIPATLELGGKSANIFFDDANWKQALDGAMLGILFNQGQVCCAGSRIFVQDTIYD KFVAELAALFDKVKVGLPWEESTQLGSLIYEDQVNKVLSYVDLAKEEGARIVAGGVRVTD GELGKGCFVRPTLIADATNDMRVAREEIFGPVAVVIKFHSEEEVIEQANDSLYGLGGGVF TQNINRAIRVARGIETGRMWVNTYNSIPAGAPFGGYKQSGIGRETHKVILEHYTQMKNII VNLSDKPSGFYDLD >gi|292596536|gb|ADCV01000012.1| GENE 112 107173 - 108240 582 355 aa, chain + ## HITS:1 COG:no KEGG:EFER_3822 NR:ns ## KEGG: EFER_3822 # Name: not_defined # Def: hypothetical protein # Organism: E.fergusonii # Pathway: not_defined # 13 350 8 324 324 154 31.0 5e-36 MRSIPIKKLYNPQYDLLSISDKEELLYQIGEIYNLELISFKHFAAFRQSTYTAVYRSHDG IDFVFVPGDTVTLGFDFKNKPLQDIFNDENLAELAYPFVEGYEEEIFSEDDVQTKICETL EDEEVLSNIETYFKHNFTQEDEFVIHPLLVQKEYSETCWIPISDEELRQNKEWQQMIEKA ESKGLSEIMIHNTICLYQTDDNHWYGKLYEETTFKKLLQNIKNHGYSLPTRREWEYLAGK GCRTIFPWGNNIDFSMNLKHMEWMDNDGEYTLEKENFFGLIIGDDPYCREIVYDEGEFSY KGGDGGRNICGGLGVIWGYLPVSPYFQDSEMVIGNNINGGYDFFRRVIRINDNMK >gi|292596536|gb|ADCV01000012.1| GENE 113 108323 - 108898 365 191 aa, chain - ## HITS:1 COG:no KEGG:Vpar_1381 NR:ns ## KEGG: Vpar_1381 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 191 1 191 191 310 91.0 1e-83 MKPFTLKRFILLPLIILSLILTTGCHLLSHYSEDEVQQYINEDYPNLTYHLESHRNNRWQ VTFDKYPQMPIEISEVMHTSAPVVPQVDRVLITNIPLITAFPLMKNYLTAEELSYATYDT SSLYIEMPIPYSAIQNQDVINFYNRMDQFCKEYAATYPDFKEKIYIRVIIKPSDGSDAPQ EYRRIFRLSQY >gi|292596536|gb|ADCV01000012.1| GENE 114 109202 - 110152 589 316 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1380 NR:ns ## KEGG: Vpar_1380 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 316 1 316 316 530 90.0 1e-149 MNLKRVIKWIGYIVAIIVVLYILIWGVLIYFLVGGDFKNSLIYLSELQESGLYYGNENRK IADNVVAVHEVNNKLYYITLDGIGIFDENVSLLDAWNKDINKYNTFIPRIDAKETQFNVS LDELYPNISSLDESDRDIWHEIFFDSKQRYISLHAGHPIKLPFYVSYRKENQIKHNDIVD LSTGTIIGEYGSEHILRNNAYYNFEFGKLTKIDFYQKAIYSYYSDNLDIGRFSKNNAGDE RYESYARNELNKVRTKDIEVLTNLLNQRFIVFNSFNEFSDFDKITFEALTIDAIKNRKAL QLGPLENQTLQQYLSK >gi|292596536|gb|ADCV01000012.1| GENE 115 110219 - 110566 256 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794654|ref|ZP_06759790.1| ## NR: gi|294794654|ref|ZP_06759790.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 115 16 130 130 185 100.0 9e-46 MSLSIGLYKLELSKRVIDEEYEYIKKHRAFGNLTKYLTIIAIVSVVLLNCKFLIDKDYLF IAQYGVVWGVYVLFIICTGFYQKRNSLYYKRGLFAIFSILFGIAGLGYALKNMFF >gi|292596536|gb|ADCV01000012.1| GENE 116 110671 - 111099 91 142 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1379 NR:ns ## KEGG: Vpar_1379 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 142 1 142 142 129 89.0 4e-29 MIQLDYLLIIGILLSVLLFLLVGVFYYSKSKLLKGLNIWFLIILSVLLSYLLYPLYELTA YREEFTSVVIISAIIIKVIINLSIFMIADRITTKWISKLLLIIWVVLVECLYMPIYLSYL VLLCVSGGIVLIEHFKGKRNPI >gi|292596536|gb|ADCV01000012.1| GENE 117 111197 - 112744 2404 515 aa, chain + ## HITS:1 COG:BS_ydbR KEGG:ns NR:ns ## COG: BS_ydbR COG0513 # Protein_GI_number: 16077525 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Bacillus subtilis # 5 488 22 507 511 515 56.0 1e-146 MLEKFEQLMISEPVLRALNDMGFEEPTPIQQEAIPVAMSGKDMIGQAQTGTGKTAAFGLP VLERVDGNERHVQVVILSPTRELAIQVAEELNKMAQYTNITALPIYGGQDINRQFRALKK NPQIIVATPGRLMDHMDRGSIKFDHVKVVVLDEADEMLNMGFVDDINKILGAIPEDHQTL LFSATMPKAIQQLAETYLTEPTLIRMKPTQVTMDLIEQYYIEVQDRQKFDVLCRLFDIQT PELAIIFTRTKRRVDEVTEGLKKRGYMAEGIHGDLSQQKRDSVIRQFREGTIDILVATDV AARGLDISGVSHVYNYDMPQDPESYTHRVGRTGRAGKAGQAFTFVIPREMEHLHAIERLT KRKIARRRAPSLGEVLEGQQRLAIESLVEMTDNLEALAPFKSSAEELLNDTDSVTLLAAA LKLLTKEPDTTPVNITEEKPLRVRRRRESGRSDRRRRDGDRRRDDRPRRSRDDRRSDRRN DRKGDRRRDDRKFDRPRGEKKTRHQSEGFKPYFKD >gi|292596536|gb|ADCV01000012.1| GENE 118 112915 - 113334 556 139 aa, chain + ## HITS:1 COG:CAC2634 KEGG:ns NR:ns ## COG: CAC2634 COG0735 # Protein_GI_number: 15895892 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 2 136 3 137 138 119 37.0 2e-27 MDIAQILRSQGFKVTPQRIAIYDALRGHHDHPTAEMLYHTLRPEHPSMSLATVYKTMEIF EKIGLVKILEVGDERAHYDWDTQAHSHIRCIRCNKVEDMMGIDLKAIKTIADQGSEYQIT GQHITFEGVCPECAKKESH >gi|292596536|gb|ADCV01000012.1| GENE 119 113528 - 114364 997 278 aa, chain + ## HITS:1 COG:lin1487 KEGG:ns NR:ns ## COG: lin1487 COG0648 # Protein_GI_number: 16800555 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Listeria innocua # 1 273 1 283 297 224 42.0 1e-58 MFVIGSHLSISKGYLHMGKEATKIGGNTFQYFTRNPRGGSMRALDVEDMNNLSIYMKEHN FGTLLAHAPYTYNPCAAKEDLRAFAKQSMMEDLERMEYLPGQMYNFHPGSHVKQGVDQGI EYIVECLNEILFPGMKTTVLLEVMAGKGTEIGSRFEEIARIIDGVKLKEYMGVCVDTCHI HEGGYDIVHNLDGVIDEFDRIVGLDRLKAIHLNDSKNPMGAHKDRHEKIGEGHIGIDAIV RVVTHPKLTNLPFYLETPNELDGYAKEISMLRSIVENK >gi|292596536|gb|ADCV01000012.1| GENE 120 114581 - 115813 1013 410 aa, chain + ## HITS:1 COG:VCA0520 KEGG:ns NR:ns ## COG: VCA0520 COG0420 # Protein_GI_number: 15601280 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Vibrio cholerae # 1 409 1 377 379 250 35.0 4e-66 MRFLHTADWHLGRIFYGQYLTEDQAHVLEHQFFNILKDENIDGILLAGDIFDRAVPPIEA IELWDSIITRLAMDCKVPLFVVSGNHDGAERLEMGRSMLGQSGIHIWGSPHHALMPFEFE GTDGKVAICPMPFSEPRRIGEALFADVESTNTETTDTEIADIVTPCYEQNCESVLNLHNY DQMYQAWSDHLYKQVPKGMCSIAISHAFVMGGEVGGSERTLSVGGSEQVNPQVFKDFHYT ALGHLHGPQRMGADHIRYSGSPLKYSFDEHMQKKSFTIIDMDTKGNVDINTIPVEAKRDV VILEGYFEDLLNDKALQAKHRDDYVQARLLDTMPIMDGMAKLRQVYHRCMTIDLVGRVAG PIADMGEAIFKELNERDLFNQFAETVWKEPLTEKEQQYINSVWDRILKED >gi|292596536|gb|ADCV01000012.1| GENE 121 115814 - 118897 3023 1027 aa, chain + ## HITS:1 COG:lin1686 KEGG:ns NR:ns ## COG: lin1686 COG0419 # Protein_GI_number: 16800754 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 1025 1 1019 1023 306 27.0 1e-82 MKPISLTIEAFGPYRDSVTLDFNELQDHSMFLIAGPTGAGKTSILDAMVYALYGEPSGEV RKTDAIRSDFAEPHRMTRVDFSFAIGNAQYRVERLPKQMVAKKRGTGMREQNASATVYEK KDGEWKVIATSAAAIRDTIQQIIGFRKDQFLQVVLLPQGEFRKLLVASTSEREELLHTLF RTELYRKLQEALKAAYDEAKAGIEENLTKQTAFMQSIPHDGATPMVTIEHVRELLANRGP HRDALAVERDEAVTVVEQFNVLRNQWSLYNQAQQSLAEATSKLDMVKARETERVNLSEKV QFLNSLAPTHELYKQYIEKQAILKTLEQALSDAKKHVELATQHEAKCLDVYSDLEGQAES IQAKRTALAQFQQQAEKFNELDVLKKELFTLQSNLEELDSKKSEDALAKQRKLVKSLEAD LEGLRKQLQDNNKFLEDTTVIQGQLNDLHRYFELLEEISKVQKKIDDKGQTLASLDETLQ VAKVHLERLEHLMQEGRAFELVHLVVDNEPCPVCGSTDHPRLAAKPEMYPTKDEIEEARK TRDVALQKQASEVGQQKTLVTRLDELTKQVAAQVSTLKLSMDAFSEESAISVQQDLLAKM DQLIVLRDKSELLSNTIADNEHKLKVARDKLATLELAHNELLKNLHDLEIRISSVQANID ALSKTLPITDIDAWQKQLESLDSDITLYDEQVKVSKTNLDTAREQLNAKRGRLETLSSQV KEETKNLNLRYKNYTKSLQAISLGEDDFVESLRDIKEIENYRIQLHALDEAFNKAQAVYD AALKVAETVVKPSDTVSDEIYATAVEHRDTLVGNLAAWDKETKHIETTLNSLEELEAAMG EAREKVKFLSRLNDLANGGEQGFKNVTFERYVLGAILDEVVYAANLRLQKMSRNRYSLER SDYTGGGRGKQGLDLAVMDAFTGQSRPANTLSGGETFLASMALALGLADVIQSYAGGIHM DTMFIDEGFGTLDPDTLELAMETLLQLQSSGRLIGIISHVPELKSRIPAHLDVTRGDDGS TAKFVIN >gi|292596536|gb|ADCV01000012.1| GENE 122 118927 - 119364 191 145 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 22 140 1 123 126 78 37 2e-13 MCYYKKRRIPTKTSCIYEGGSMKFSFAHNNINVKDLDKSLAFYKEALLLEESRRLEDPSG AFTLVYLKSPYTAHELELTWLRDWDRPYNLGDNEFHLAFYVDDYEAALKKHKEMGVVAYE NADMGIYFIADPDGYWTEIIPAGKY >gi|292596536|gb|ADCV01000012.1| GENE 123 119364 - 120071 877 235 aa, chain + ## HITS:1 COG:FN0725 KEGG:ns NR:ns ## COG: FN0725 COG1179 # Protein_GI_number: 19704060 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Fusobacterium nucleatum # 5 232 3 234 234 223 47.0 2e-58 MEYMLTRLEWLVGPNKIQTLRDTSIALFGVGGVGGGALEALVRAGVGRIVIIDGDSIAPS NLNRQMITTHNTIGERKVEVAKTRALAINPDVVIETHDIMYTEENYPGFIQSLNVDYVID AIDMVTAKLNIIEVCQRESIPVISCMGGGNRFYPEKLMIADINKSHTCPLARVMRRELKK RGIKKQLVLFSTEKPKKPQFRGDATSPGTCSFVPPVAGFILAAHVLRTILEVPEQ >gi|292596536|gb|ADCV01000012.1| GENE 124 120068 - 120502 629 144 aa, chain + ## HITS:1 COG:BH1545 KEGG:ns NR:ns ## COG: BH1545 COG0652 # Protein_GI_number: 15614108 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Bacillus halodurans # 1 141 1 141 145 187 70.0 4e-48 MKKAKIHMADGGDIVIELFEKEAPGTVQNFIDLINKGFYNGLRFHRVIPGFVAQGGCPNG NGTGGPGYTIKDELVGNPHKHERGALSMAHRGPNTGGSQFFIVYEPQPHLDGVHTVFGKV IEGMDVVDGIQQGAIMETVEVIEG >gi|292596536|gb|ADCV01000012.1| GENE 125 120507 - 121136 678 209 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1370 NR:ns ## KEGG: Vpar_1370 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 209 1 209 209 432 97.0 1e-120 MNEVSIKHPEWLYIDVNGKTSYGYDQEWFTDEWQRLSGCGPTSASQVLGYSLFRDGLLDL ETTSDQTLALERMNLVWKYVKPRFGGGVYKTQWMERGLVRLLEDEGLSYDVHMLNVSPFC ASRVEVEAAAQFIHDALEQDVPVAFLNRHKGKEKALYTWHWVPIHKMFMDGDDIRCGIFD EGEIRDFSLANWMKDTILGGGFCYISRKE >gi|292596536|gb|ADCV01000012.1| GENE 126 121220 - 122059 1054 279 aa, chain + ## HITS:1 COG:BH3811 KEGG:ns NR:ns ## COG: BH3811 COG0421 # Protein_GI_number: 15616373 # Func_class: E Amino acid transport and metabolism # Function: Spermidine synthase # Organism: Bacillus halodurans # 1 276 1 274 275 272 50.0 5e-73 MSQWITEEQTPHLRLSAEAEEVLYSGESEFQKIEVFKSKEYGMMLALDGVFQTSEREEFI YHEMMSHIPLFLHPNPERVLIIGGGDGGVARECVRHDCVKEVTMVEIDGKVVELAKQYLP TIAKAMIENHPKLTVKIGDGIGFMAEAEDYYDVIIVDCSDPIGPGEGLFTEEFYKNTLKA LKADGLFVQQTESPMLHKPLVEKVFGYVNSHFPIARLYTAFIPIYPAGMHCFTLGSKTFD PLTWTPNREQNFETKYYNADIQKAAFALPNFVKNYLPTK Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:15:06 2011 Seq name: gi|292596535|gb|ADCV01000013.1| Veillonella sp. 3_1_44 cont1.13, whole genome shotgun sequence Length of sequence - 299201 bp Number of predicted genes - 280, with homology - 265 Number of transcription units - 148, operones - 66 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 156 - 263 86.0 # CR954253 [D:49914..50030] # 5S ribosomal RNA # Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 # Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. + Prom 649 - 708 7.2 1 1 Op 1 . + CDS 735 - 1106 361 ## Vpar_0056 hypothetical protein + Prom 1153 - 1212 6.6 2 1 Op 2 . + CDS 1261 - 2433 1597 ## Vpar_0057 peptidase M48 Ste24p + Term 2498 - 2541 9.1 3 2 Tu 1 . - CDS 2464 - 2655 102 ## - Prom 2690 - 2749 5.0 + Prom 2764 - 2823 10.6 4 3 Op 1 30/0.000 + CDS 3064 - 3675 648 ## COG0811 Biopolymer transport proteins 5 3 Op 2 . + CDS 3672 - 4076 443 ## COG0848 Biopolymer transport protein 6 3 Op 3 . + CDS 4081 - 4833 1015 ## Vpar_0060 TonB family protein + Prom 4877 - 4936 8.8 7 4 Op 1 . + CDS 4964 - 6070 1399 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins 8 4 Op 2 . + CDS 6079 - 7416 1194 ## Vpar_0061 TonB-dependent receptor plug 9 4 Op 3 33/0.000 + CDS 7416 - 8438 1009 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 10 4 Op 4 35/0.000 + CDS 8451 - 9497 1114 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 11 4 Op 5 1/0.167 + CDS 9497 - 10258 252 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 12 4 Op 6 . + CDS 10280 - 12220 1792 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins + Term 12309 - 12355 3.6 + Prom 12273 - 12332 4.6 13 5 Op 1 1/0.167 + CDS 12364 - 14346 1845 ## COG4206 Outer membrane cobalamin receptor protein 14 5 Op 2 33/0.000 + CDS 14390 - 15343 448 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 15 5 Op 3 35/0.000 + CDS 15336 - 16373 1338 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 16 5 Op 4 . + CDS 16373 - 17218 1032 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components + Prom 17233 - 17292 3.4 17 6 Op 1 4/0.042 + CDS 17315 - 18244 1075 ## COG1239 Mg-chelatase subunit ChlI 18 6 Op 2 1/0.167 + CDS 18247 - 20274 1294 ## COG1240 Mg-chelatase subunit ChlD 19 6 Op 3 . + CDS 20278 - 23901 2716 ## COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases 20 6 Op 4 1/0.167 + CDS 23903 - 24814 797 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 21 6 Op 5 . + CDS 24835 - 26703 2163 ## COG4206 Outer membrane cobalamin receptor protein + Term 26828 - 26871 9.2 + Prom 26944 - 27003 7.7 22 7 Tu 1 . + CDS 27140 - 28462 1361 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 28470 - 28509 5.2 - Term 28548 - 28596 10.2 23 8 Tu 1 . - CDS 28632 - 29093 389 ## COG0640 Predicted transcriptional regulators - Prom 29282 - 29341 9.3 + Prom 29296 - 29355 11.4 24 9 Op 1 12/0.000 + CDS 29437 - 30789 1564 ## COG0644 Dehydrogenases (flavoproteins) 25 9 Op 2 3/0.042 + CDS 30786 - 31064 329 ## COG2440 Ferredoxin-like protein 26 9 Op 3 29/0.000 + CDS 31069 - 32058 1184 ## COG2086 Electron transfer flavoprotein, beta subunit 27 9 Op 4 . + CDS 32058 - 33059 1307 ## COG2025 Electron transfer flavoprotein, alpha subunit + Term 33156 - 33187 1.1 - Term 33084 - 33120 0.0 28 10 Tu 1 . - CDS 33238 - 33366 98 ## - Prom 33390 - 33449 2.3 + Prom 33253 - 33312 4.5 29 11 Tu 1 . + CDS 33427 - 34185 980 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity + Prom 34206 - 34265 2.2 30 12 Tu 1 . + CDS 34298 - 35059 560 ## COG0300 Short-chain dehydrogenases of various substrate specificities + Prom 35158 - 35217 9.2 31 13 Tu 1 . + CDS 35327 - 35914 695 ## Vpar_0083 hypothetical protein + Term 35990 - 36036 10.3 + Prom 35995 - 36054 4.2 32 14 Op 1 49/0.000 + CDS 36147 - 37097 717 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 33 14 Op 2 5/0.000 + CDS 37090 - 37899 781 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components + Term 37931 - 37957 -0.6 34 14 Op 3 5/0.000 + CDS 37966 - 39489 2180 ## COG0747 ABC-type dipeptide transport system, periplasmic component 35 14 Op 4 44/0.000 + CDS 39482 - 40249 382 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 36 14 Op 5 . + CDS 40251 - 40991 317 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Prom 41045 - 41104 8.9 37 15 Tu 1 . + CDS 41213 - 41701 481 ## Vpar_0090 hypothetical protein + Term 41715 - 41762 14.3 - Term 41702 - 41748 14.1 38 16 Tu 1 . - CDS 41759 - 42106 589 ## Vpar_0091 hypothetical protein - Prom 42186 - 42245 6.9 - Term 42290 - 42323 3.1 39 17 Op 1 . - CDS 42334 - 42606 257 ## COG3041 Uncharacterized protein conserved in bacteria 40 17 Op 2 . - CDS 42613 - 42894 465 ## HMPREF0868_0245 putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein - Prom 43009 - 43068 10.2 + Prom 42988 - 43047 5.8 41 18 Tu 1 . + CDS 43080 - 43712 732 ## Vpar_0092 hypothetical protein + Term 43828 - 43882 15.1 42 19 Tu 1 . - CDS 43883 - 43960 126 ## - Prom 44012 - 44071 5.8 + Prom 43878 - 43937 4.5 43 20 Tu 1 . + CDS 44100 - 44513 180 ## Vpar_0093 hypothetical protein - Term 44546 - 44598 9.1 44 21 Tu 1 . - CDS 44649 - 45164 334 ## SSA_0234 hypothetical protein - Prom 45193 - 45252 3.9 45 22 Op 1 6/0.000 + CDS 45654 - 47216 2225 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 46 22 Op 2 30/0.000 + CDS 47218 - 48477 1655 ## COG0065 3-isopropylmalate dehydratase large subunit 47 22 Op 3 10/0.000 + CDS 48479 - 48970 791 ## COG0066 3-isopropylmalate dehydratase small subunit + Prom 49002 - 49061 3.5 48 22 Op 4 . + CDS 49255 - 50325 1464 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 50437 - 50470 2.0 49 23 Tu 1 . - CDS 50429 - 50614 59 ## + Prom 50364 - 50423 6.5 50 24 Tu 1 . + CDS 50556 - 51095 688 ## Vpar_0098 hypothetical protein + Term 51197 - 51228 1.8 + Prom 51133 - 51192 6.6 51 25 Tu 1 . + CDS 51405 - 52592 1381 ## COG0426 Uncharacterized flavoproteins + Term 52644 - 52689 7.6 52 26 Tu 1 . + CDS 53329 - 55059 2619 ## COG5295 Autotransporter adhesin + Term 55094 - 55131 7.3 + Prom 55375 - 55434 11.9 53 27 Tu 1 . + CDS 55559 - 60517 5109 ## COG5295 Autotransporter adhesin + Term 60636 - 60700 14.1 + Prom 60916 - 60975 10.5 54 28 Tu 1 . + CDS 61036 - 61521 559 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 61667 - 61709 3.2 + Prom 61611 - 61670 12.1 55 29 Op 1 6/0.000 + CDS 61730 - 62479 1088 ## COG3819 Predicted membrane protein 56 29 Op 2 3/0.042 + CDS 62481 - 63410 1046 ## COG3817 Predicted membrane protein + Prom 63424 - 63483 3.9 57 30 Tu 1 . + CDS 63524 - 64177 905 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) + Term 64227 - 64273 8.1 + Prom 64277 - 64336 5.5 58 31 Op 1 . + CDS 64442 - 65557 1650 ## COG0435 Predicted glutathione S-transferase 59 31 Op 2 1/0.167 + CDS 65589 - 66992 669 ## COG2079 Uncharacterized protein involved in propionate catabolism 60 31 Op 3 31/0.000 + CDS 66985 - 67824 1221 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 67826 - 67866 6.0 61 31 Op 4 17/0.000 + CDS 67880 - 68596 874 ## COG0765 ABC-type amino acid transport system, permease component 62 31 Op 5 34/0.000 + CDS 68603 - 69319 674 ## COG0765 ABC-type amino acid transport system, permease component 63 31 Op 6 1/0.167 + CDS 69316 - 70089 669 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 70102 - 70161 5.5 64 32 Tu 1 . + CDS 70219 - 70701 552 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 70736 - 70780 7.6 + Prom 70812 - 70871 11.9 65 33 Tu 1 . + CDS 70901 - 71299 507 ## gi|294794724|ref|ZP_06759859.1| hypothetical protein HMPREF0873_01334 + Term 71303 - 71340 7.1 - Term 71289 - 71326 7.1 66 34 Op 1 16/0.000 - CDS 71354 - 72256 1462 ## COG1879 ABC-type sugar transport system, periplasmic component 67 34 Op 2 21/0.000 - CDS 72266 - 73201 1417 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 68 34 Op 3 9/0.000 - CDS 73201 - 74682 189 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 74722 - 74781 7.7 69 34 Op 4 6/0.000 - CDS 74836 - 75249 526 ## COG1869 ABC-type ribose transport system, auxiliary component 70 34 Op 5 . - CDS 75379 - 76269 1052 ## COG0524 Sugar kinases, ribokinase family - Prom 76340 - 76399 8.5 71 35 Op 1 . - CDS 76610 - 76936 203 ## gi|282849413|ref|ZP_06258798.1| plasmid stabilization system protein, RelE/ParE family 72 35 Op 2 . - CDS 76941 - 77222 386 ## Dhaf_1690 prevent-host-death family protein - Prom 77267 - 77326 8.2 - Term 77366 - 77408 8.1 73 36 Op 1 . - CDS 77460 - 78116 904 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases - Prom 78150 - 78209 7.4 74 36 Op 2 . - CDS 78225 - 78746 382 ## COG1335 Amidases related to nicotinamidase - Prom 78794 - 78853 7.8 + Prom 78918 - 78977 6.7 75 37 Op 1 . + CDS 79030 - 79275 233 ## Vpar_0113 prevent-host-death family protein 76 37 Op 2 . + CDS 79278 - 79598 170 ## TherJR_0533 addiction module toxin, RelE/StbE family + Term 79608 - 79642 3.1 + Prom 79651 - 79710 6.3 77 38 Op 1 15/0.000 + CDS 79739 - 81364 1933 ## COG1122 ABC-type cobalt transport system, ATPase component 78 38 Op 2 34/0.000 + CDS 81357 - 82169 271 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 79 38 Op 3 . + CDS 82179 - 82847 740 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters + Term 82986 - 83032 11.0 80 39 Tu 1 . + CDS 83202 - 83702 423 ## COG1247 Sortase and related acyltransferases + Term 83728 - 83767 -0.8 + Prom 83705 - 83764 4.5 81 40 Tu 1 . + CDS 83803 - 84666 852 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Term 84702 - 84748 8.0 + Prom 84687 - 84746 8.2 82 41 Op 1 18/0.000 + CDS 84910 - 86514 1671 ## COG0040 ATP phosphoribosyltransferase 83 41 Op 2 6/0.000 + CDS 86587 - 87864 1403 ## COG0141 Histidinol dehydrogenase + Prom 87890 - 87949 6.2 84 41 Op 3 5/0.000 + CDS 87987 - 88577 535 ## COG0131 Imidazoleglycerol-phosphate dehydratase 85 41 Op 4 23/0.000 + CDS 88591 - 89313 943 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 86 41 Op 5 24/0.000 + CDS 89398 - 90156 1006 ## COG0107 Imidazoleglycerol-phosphate synthase + Prom 90268 - 90327 4.2 87 41 Op 6 4/0.042 + CDS 90362 - 90679 304 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 88 41 Op 7 . + CDS 90682 - 91008 467 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase + Term 91033 - 91071 6.3 89 42 Op 1 . + CDS 91098 - 92174 1006 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 90 42 Op 2 . + CDS 92253 - 92879 535 ## COG0118 Glutamine amidotransferase + Term 92941 - 92991 10.0 + Prom 92943 - 93002 10.2 91 43 Tu 1 . + CDS 93161 - 94993 2397 ## COG1966 Carbon starvation protein, predicted membrane protein + Term 95011 - 95058 11.2 + Prom 95004 - 95063 9.1 92 44 Tu 1 . + CDS 95217 - 96842 1561 ## Vpar_0135 hypothetical protein + Term 96929 - 96973 12.5 - Term 96915 - 96961 9.1 93 45 Tu 1 . - CDS 97010 - 97741 490 ## Vpar_0136 copper amine oxidase domain protein - Prom 97803 - 97862 7.0 + Prom 98622 - 98681 6.1 94 46 Tu 1 . + CDS 98730 - 98888 120 ## Vpar_0138 hypothetical protein + Prom 99085 - 99144 6.2 95 47 Op 1 . + CDS 99192 - 99689 435 ## PROTEIN SUPPORTED gi|148994988|ref|ZP_01823966.1| ribosomal protein L11 methyltransferase 96 47 Op 2 . + CDS 99712 - 100551 622 ## Vpar_0140 hypothetical protein + Term 100707 - 100745 8.6 + Prom 100583 - 100642 5.6 97 48 Op 1 6/0.000 + CDS 100766 - 101680 651 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 + Prom 101732 - 101791 6.2 98 48 Op 2 . + CDS 101843 - 102451 671 ## COG1045 Serine acetyltransferase + Prom 102456 - 102515 6.2 99 49 Op 1 . + CDS 102565 - 102654 70 ## + Prom 102672 - 102731 6.8 100 49 Op 2 . + CDS 102848 - 103282 564 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) + Term 103425 - 103471 10.2 + TRNA 103333 - 103423 59.9 # Ser GCT 0 0 + Prom 103335 - 103394 80.3 101 50 Op 1 . + CDS 103634 - 104383 1035 ## Vpar_0144 hypothetical protein 102 50 Op 2 . + CDS 104403 - 105662 1347 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 105781 - 105823 7.0 + Prom 105695 - 105754 10.8 103 51 Op 1 . + CDS 105969 - 106571 897 ## Vpar_0146 hypothetical protein 104 51 Op 2 . + CDS 106549 - 107295 556 ## COG3022 Uncharacterized protein conserved in bacteria 105 51 Op 3 . + CDS 107375 - 108418 1205 ## COG0502 Biotin synthase and related enzymes + Term 108424 - 108469 1.0 + Prom 108593 - 108652 8.3 106 52 Tu 1 . + CDS 108798 - 110864 2425 ## COG0480 Translation elongation factors (GTPases) + Term 111008 - 111048 6.5 + Prom 110915 - 110974 8.9 107 53 Op 1 . + CDS 111147 - 111623 526 ## COG2731 Beta-galactosidase, beta subunit 108 53 Op 2 9/0.000 + CDS 111625 - 112551 447 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 109 53 Op 3 9/0.000 + CDS 112524 - 113069 518 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 110 53 Op 4 . + CDS 113105 - 113464 223 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 113467 - 113530 12.4 + Prom 113542 - 113601 7.3 111 54 Op 1 2/0.083 + CDS 113634 - 114929 1785 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 112 54 Op 2 1/0.167 + CDS 114993 - 116237 1347 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 116240 - 116297 6.5 + Prom 116266 - 116325 3.5 113 55 Tu 1 . + CDS 116469 - 117722 1541 ## COG3069 C4-dicarboxylate transporter + Term 117741 - 117800 18.1 - Term 117965 - 118006 2.6 114 56 Tu 1 . - CDS 118039 - 118908 851 ## COG0583 Transcriptional regulator - Prom 118930 - 118989 2.3 115 57 Op 1 5/0.000 + CDS 119107 - 121404 2918 ## COG1048 Aconitase A 116 57 Op 2 3/0.042 + CDS 121429 - 122568 1202 ## COG2828 Uncharacterized protein conserved in bacteria 117 57 Op 3 . + CDS 122571 - 123992 2063 ## COG0471 Di- and tricarboxylate transporters + Term 124082 - 124151 12.1 118 58 Op 1 . - CDS 124192 - 125370 767 ## COG0477 Permeases of the major facilitator superfamily 119 58 Op 2 . - CDS 125383 - 127611 2296 ## Vpar_0175 hypothetical protein - Prom 127656 - 127715 5.3 + Prom 127549 - 127608 6.2 120 59 Tu 1 . + CDS 127759 - 127830 96 ## - Term 127771 - 127811 1.8 121 60 Tu 1 . - CDS 127831 - 128061 64 ## - Prom 128268 - 128327 4.4 + Prom 128104 - 128163 5.3 122 61 Op 1 35/0.000 + CDS 128203 - 129672 1998 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 123 61 Op 2 . + CDS 129672 - 130238 608 ## COG0512 Anthranilate/para-aminobenzoate synthases component II - Term 130027 - 130061 2.8 124 62 Tu 1 . - CDS 130239 - 130436 89 ## - Prom 130464 - 130523 1.9 125 63 Op 1 21/0.000 + CDS 130819 - 131829 1408 ## COG0547 Anthranilate phosphoribosyltransferase 126 63 Op 2 13/0.000 + CDS 131833 - 133404 1482 ## COG0134 Indole-3-glycerol phosphate synthase 127 63 Op 3 37/0.000 + CDS 133447 - 134640 1619 ## COG0133 Tryptophan synthase beta chain 128 63 Op 4 . + CDS 134633 - 135424 435 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc + Term 135476 - 135512 7.5 - Term 135457 - 135506 11.1 129 64 Op 1 . - CDS 135566 - 135862 376 ## Vpar_0164 hypothetical protein 130 64 Op 2 . - CDS 135852 - 135935 64 ## - Prom 136154 - 136213 5.3 + Prom 135926 - 135985 5.0 131 65 Op 1 . + CDS 136036 - 136923 937 ## Vpar_0165 protein of unknown function DUF805 132 65 Op 2 6/0.000 + CDS 136927 - 137496 421 ## COG3152 Predicted membrane protein + Prom 137499 - 137558 5.7 133 65 Op 3 6/0.000 + CDS 137715 - 138350 539 ## COG3152 Predicted membrane protein + Prom 138392 - 138451 8.2 134 65 Op 4 . + CDS 138505 - 138861 376 ## COG3152 Predicted membrane protein + Term 138881 - 138908 0.1 135 66 Tu 1 . + CDS 139328 - 142162 3373 ## COG0060 Isoleucyl-tRNA synthetase + Term 142396 - 142447 2.0 136 67 Tu 1 . - CDS 142244 - 144616 2172 ## Vpar_0175 hypothetical protein - Prom 144781 - 144840 8.3 - Term 144813 - 144859 -0.9 137 68 Tu 1 . - CDS 144928 - 145710 1259 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 145753 - 145812 7.5 + Prom 145750 - 145809 5.5 138 69 Op 1 . + CDS 145884 - 147065 1285 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 139 69 Op 2 . + CDS 147122 - 148273 1224 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 148283 - 148320 -0.8 + Prom 148275 - 148334 5.7 140 70 Tu 1 . + CDS 148455 - 148652 178 ## Vpar_0179 4Fe-4S ferredoxin iron-sulfur binding domain protein + Term 148721 - 148758 -0.9 + Prom 148746 - 148805 8.8 141 71 Tu 1 . + CDS 148896 - 150449 2374 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 150499 - 150539 8.4 + Prom 150467 - 150526 8.0 142 72 Op 1 27/0.000 + CDS 150757 - 152289 974 ## COG0286 Type I restriction-modification system methyltransferase subunit 143 72 Op 2 11/0.000 + CDS 152279 - 153499 330 ## COG0732 Restriction endonuclease S subunits + Prom 153543 - 153602 10.8 144 72 Op 3 . + CDS 153646 - 156786 2082 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases + Term 156807 - 156844 7.3 + Prom 156976 - 157035 6.8 145 73 Tu 1 . + CDS 157093 - 159267 892 ## Pmob_0412 hypothetical protein + Prom 159669 - 159728 2.8 146 74 Op 1 . + CDS 159797 - 160849 490 ## SCAB_21281 hypothetical protein 147 74 Op 2 . + CDS 160919 - 161119 241 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 161152 - 161189 6.2 + Prom 161154 - 161213 9.1 148 75 Tu 1 . + CDS 161258 - 161674 270 ## Vpar_0186 hypothetical protein + Prom 161698 - 161757 6.7 149 76 Tu 1 . + CDS 161783 - 162292 278 ## Vpar_0188 hypothetical protein + Prom 162342 - 162401 4.0 150 77 Op 1 . + CDS 162435 - 162758 231 ## Vpar_0189 hypothetical protein 151 77 Op 2 . + CDS 162761 - 163063 286 ## Vpar_0190 hypothetical protein 152 77 Op 3 8/0.000 + CDS 163082 - 163501 417 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 163532 - 163573 6.0 + Prom 163605 - 163664 9.3 153 78 Op 1 . + CDS 163695 - 164177 465 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 154 78 Op 2 . + CDS 164230 - 165138 654 ## Ssed_0897 hypothetical protein + Prom 165864 - 165923 3.7 155 79 Op 1 8/0.000 + CDS 166038 - 167213 1418 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component + Prom 167221 - 167280 1.7 156 79 Op 2 33/0.000 + CDS 167315 - 168487 1511 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 157 79 Op 3 35/0.000 + CDS 168504 - 169553 1143 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 158 79 Op 4 . + CDS 169550 - 170329 271 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 170445 - 170496 6.5 - Term 170436 - 170481 2.1 159 80 Op 1 10/0.000 - CDS 170515 - 171615 1113 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 160 80 Op 2 42/0.000 - CDS 171612 - 172577 678 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 161 80 Op 3 25/0.000 - CDS 172574 - 173305 209 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 173378 - 173437 4.3 - Term 173332 - 173374 -0.8 162 80 Op 4 . - CDS 173451 - 174392 1236 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 174482 - 174541 3.9 - Term 174506 - 174543 8.7 163 81 Tu 1 . - CDS 174581 - 174676 168 ## - Prom 174760 - 174819 7.7 + Prom 174746 - 174805 6.7 164 82 Op 1 . + CDS 174856 - 175233 540 ## Vpar_0204 TonB family protein 165 82 Op 2 . + CDS 175244 - 175591 386 ## Vpar_0205 TonB family protein + Prom 175727 - 175786 7.4 166 83 Tu 1 . + CDS 175820 - 177436 1861 ## COG2461 Uncharacterized conserved protein + Term 177459 - 177498 4.1 + Prom 177583 - 177642 4.1 167 84 Tu 1 . + CDS 177688 - 179316 1913 ## COG1866 Phosphoenolpyruvate carboxykinase (ATP) + Term 179341 - 179377 2.8 + Prom 179428 - 179487 14.3 168 85 Tu 1 . + CDS 179548 - 180453 903 ## COG0583 Transcriptional regulator + Term 180568 - 180616 10.1 + Prom 180780 - 180839 5.3 169 86 Tu 1 . + CDS 180863 - 183028 2703 ## COG1151 6Fe-6S prismane cluster-containing protein + Term 183071 - 183132 1.3 170 87 Tu 1 . - CDS 183198 - 183983 933 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 184107 - 184166 6.5 + Prom 184021 - 184080 8.9 171 88 Tu 1 . + CDS 184298 - 184744 381 ## Vpar_0211 putative transcriptional regulator, TetR family + Term 184800 - 184829 1.4 + Prom 185045 - 185104 9.1 172 89 Tu 1 . + CDS 185187 - 185549 353 ## Vpar_0212 hypothetical protein + Term 185552 - 185595 8.2 - Term 185610 - 185661 7.0 173 90 Tu 1 . - CDS 185670 - 186698 933 ## COG0502 Biotin synthase and related enzymes - Prom 186806 - 186865 8.7 + Prom 186808 - 186867 9.2 174 91 Op 1 5/0.000 + CDS 187021 - 188292 1025 ## COG0420 DNA repair exonuclease 175 91 Op 2 . + CDS 188282 - 191176 3342 ## COG4717 Uncharacterized conserved protein + Term 191195 - 191251 16.8 + Prom 191240 - 191299 7.3 176 92 Op 1 9/0.000 + CDS 191339 - 192382 1173 ## COG0407 Uroporphyrinogen-III decarboxylase 177 92 Op 2 4/0.042 + CDS 192387 - 193391 979 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 178 92 Op 3 2/0.083 + CDS 193388 - 195004 1868 ## COG1232 Protoporphyrinogen oxidase + Term 195128 - 195182 6.4 + Prom 195100 - 195159 6.4 179 93 Tu 1 . + CDS 195234 - 195965 845 ## COG3253 Uncharacterized conserved protein + Term 195966 - 196011 9.2 - Term 196389 - 196429 1.2 180 94 Tu 1 . - CDS 196558 - 197895 1573 ## COG2223 Nitrate/nitrite transporter + Prom 198030 - 198089 10.1 181 95 Op 1 . + CDS 198215 - 198940 450 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 198951 - 198993 9.5 182 95 Op 2 13/0.000 + CDS 199012 - 202689 4520 ## COG5013 Nitrate reductase alpha subunit 183 95 Op 3 12/0.000 + CDS 202679 - 204112 1543 ## COG1140 Nitrate reductase beta subunit 184 95 Op 4 12/0.000 + CDS 204105 - 204629 556 ## COG2180 Nitrate reductase delta subunit 185 95 Op 5 . + CDS 204626 - 205297 914 ## COG2181 Nitrate reductase gamma subunit 186 95 Op 6 . + CDS 205375 - 205503 105 ## gi|282849307|ref|ZP_06258692.1| hypothetical protein HMPREF1035_0257 + Term 205547 - 205610 6.2 + Prom 205506 - 205565 6.0 187 96 Tu 1 . + CDS 205622 - 206224 790 ## Vpar_0226 hypothetical protein + Term 206237 - 206279 9.6 + Prom 206396 - 206455 8.1 188 97 Op 1 . + CDS 206476 - 207747 1880 ## Vpar_0227 S-layer domain protein + Prom 207782 - 207841 4.2 189 97 Op 2 . + CDS 207867 - 208472 698 ## Vpar_0228 hypothetical protein + Term 208528 - 208576 9.0 + Prom 208638 - 208697 5.4 190 98 Op 1 9/0.000 + CDS 208764 - 209969 971 ## COG0477 Permeases of the major facilitator superfamily + Prom 209975 - 210034 4.0 191 98 Op 2 . + CDS 210144 - 211028 973 ## COG0583 Transcriptional regulator + Term 211043 - 211089 13.1 - Term 211031 - 211078 13.2 192 99 Op 1 . - CDS 211169 - 211783 534 ## COG1279 Lysine efflux permease 193 99 Op 2 . - CDS 211785 - 211850 74 ## 194 99 Op 3 . - CDS 211919 - 212959 1016 ## COG2855 Predicted membrane protein - Prom 213132 - 213191 10.5 + Prom 213077 - 213136 11.2 195 100 Tu 1 . + CDS 213307 - 213852 673 ## COG0288 Carbonic anhydrase + Term 214040 - 214087 12.1 + Prom 214294 - 214353 6.9 196 101 Op 1 12/0.000 + CDS 214406 - 215158 1041 ## COG0132 Dethiobiotin synthetase + Term 215190 - 215233 -0.6 + Prom 215248 - 215307 4.9 197 101 Op 2 . + CDS 215360 - 216748 1665 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase + Term 216771 - 216828 4.2 + Prom 216846 - 216905 5.8 198 102 Tu 1 . + CDS 216936 - 218276 1629 ## COG2704 Anaerobic C4-dicarboxylate transporter + Term 218328 - 218363 5.4 - Term 218316 - 218351 5.4 199 103 Op 1 5/0.000 - CDS 218358 - 218768 350 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 218892 - 218951 6.7 200 103 Op 2 42/0.000 - CDS 218999 - 219817 849 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 201 103 Op 3 . - CDS 219810 - 220601 1003 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component - Prom 220648 - 220707 5.3 + Prom 220596 - 220655 8.4 202 104 Tu 1 . + CDS 220749 - 221663 1362 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 221670 - 221716 13.0 203 105 Tu 1 . + CDS 222015 - 222686 504 ## Vpar_0242 hypothetical protein + Term 222707 - 222749 5.2 + Prom 222714 - 222773 10.8 204 106 Op 1 . + CDS 222925 - 223608 291 ## Vpar_0243 hypothetical protein + Term 223628 - 223661 2.1 205 106 Op 2 . + CDS 223681 - 224310 438 ## Vpar_0244 hypothetical protein + Term 224328 - 224380 8.0 - Term 224323 - 224357 3.2 206 107 Tu 1 . - CDS 224365 - 225276 770 ## Vpar_0245 hypothetical protein - Prom 225355 - 225414 12.0 + Prom 225339 - 225398 15.1 207 108 Tu 1 . + CDS 225437 - 226000 671 ## Vpar_0246 hypothetical protein + Term 226009 - 226054 1.3 + Prom 226432 - 226491 3.8 208 109 Tu 1 . + CDS 226516 - 227136 834 ## Vpar_0247 hypothetical protein + Prom 227177 - 227236 2.8 209 110 Tu 1 . + CDS 227295 - 227573 307 ## gi|282849283|ref|ZP_06258668.1| hypothetical protein HMPREF1035_0233 - Term 227476 - 227519 -1.0 210 111 Tu 1 . - CDS 227588 - 227785 122 ## - Prom 227848 - 227907 5.8 - Term 227924 - 227974 18.1 211 112 Tu 1 . - CDS 227994 - 229106 1389 ## COG0787 Alanine racemase - Prom 229247 - 229306 11.2 + Prom 229192 - 229251 9.6 212 113 Tu 1 . + CDS 229466 - 230416 1040 ## COG1052 Lactate dehydrogenase and related dehydrogenases + Term 230605 - 230637 2.0 + Prom 230472 - 230531 6.5 213 114 Op 1 . + CDS 230652 - 231044 438 ## COG0789 Predicted transcriptional regulators 214 114 Op 2 . + CDS 231073 - 232713 625 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 + Prom 232781 - 232840 6.8 215 115 Op 1 . + CDS 232873 - 233139 194 ## SAG1253 ISL3 family transposase 216 115 Op 2 . + CDS 233103 - 233603 195 ## COG3464 Transposase and inactivated derivatives 217 115 Op 3 . + CDS 233639 - 234196 265 ## SAG1253 ISL3 family transposase + Term 234250 - 234308 14.5 - Term 234007 - 234046 -0.9 218 116 Tu 1 . - CDS 234230 - 234793 395 ## COG1309 Transcriptional regulator - Prom 234919 - 234978 6.6 + Prom 234898 - 234957 7.9 219 117 Tu 1 . + CDS 234994 - 236889 1559 ## COG2217 Cation transport ATPase + Term 236899 - 236940 9.2 - Term 236943 - 236984 1.5 220 118 Op 1 11/0.000 - CDS 237009 - 237785 539 ## COG1180 Pyruvate-formate lyase-activating enzyme 221 118 Op 2 . - CDS 237798 - 238034 443 ## COG1882 Pyruvate-formate lyase - Term 238054 - 238100 0.7 222 118 Op 3 . - CDS 238110 - 240227 2811 ## COG1882 Pyruvate-formate lyase - Prom 240438 - 240497 8.7 + Prom 240355 - 240414 7.2 223 119 Op 1 . + CDS 240581 - 241075 195 ## Vpar_0256 transcriptional regulator, XRE family 224 119 Op 2 . + CDS 241082 - 241273 58 ## Vpar_0256 transcriptional regulator, XRE family 225 120 Tu 1 . - CDS 241292 - 241375 56 ## - Prom 241551 - 241610 5.4 + Prom 241393 - 241452 7.7 226 121 Op 1 . + CDS 241602 - 242264 576 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 227 121 Op 2 . + CDS 242288 - 242455 81 ## gi|282849275|ref|ZP_06258660.1| putative membrane protein + Term 242461 - 242511 -0.8 + Prom 242575 - 242634 8.6 228 122 Op 1 32/0.000 + CDS 242714 - 243736 1052 ## COG1135 ABC-type metal ion transport system, ATPase component 229 122 Op 2 22/0.000 + CDS 243736 - 244407 896 ## COG2011 ABC-type metal ion transport system, permease component 230 122 Op 3 . + CDS 244462 - 245286 1199 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 245325 - 245370 8.5 - Term 245313 - 245358 12.3 231 123 Op 1 35/0.000 - CDS 245421 - 247244 178 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 232 123 Op 2 . - CDS 247241 - 249076 191 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 249126 - 249185 5.1 + Prom 249190 - 249249 7.9 233 124 Tu 1 . + CDS 249287 - 250753 2021 ## COG0471 Di- and tricarboxylate transporters + Prom 251036 - 251095 5.8 234 125 Op 1 . + CDS 251145 - 251549 424 ## COG4125 Predicted membrane protein 235 125 Op 2 . + CDS 251609 - 252112 573 ## Vpar_0265 hypothetical protein + Term 252167 - 252203 6.1 + Prom 252176 - 252235 8.9 236 126 Op 1 2/0.083 + CDS 252265 - 253398 1665 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 237 126 Op 2 . + CDS 253409 - 254593 1224 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Term 254598 - 254633 -0.8 238 126 Op 3 2/0.083 + CDS 254655 - 255614 1129 ## COG1897 Homoserine trans-succinylase + Term 255687 - 255722 -0.1 + Prom 255825 - 255884 6.7 239 127 Tu 1 . + CDS 255904 - 257175 1926 ## COG2873 O-acetylhomoserine sulfhydrylase + Term 257294 - 257338 8.1 - Term 257389 - 257428 5.1 240 128 Tu 1 . - CDS 257657 - 258244 866 ## Vpar_0270 propeptide PepSY amd peptidase M4 - Prom 258455 - 258514 9.3 + Prom 258488 - 258547 6.2 241 129 Tu 1 . + CDS 258639 - 259205 644 ## COG1268 Uncharacterized conserved protein + Term 259351 - 259399 7.1 - Term 259346 - 259376 1.0 242 130 Op 1 7/0.000 - CDS 259392 - 260156 844 ## COG3689 Predicted membrane protein 243 130 Op 2 . - CDS 260215 - 261750 846 ## COG0701 Predicted permeases 244 130 Op 3 . - CDS 261747 - 262616 703 ## COG0523 Putative GTPases (G3E family) - Prom 262840 - 262899 11.1 245 131 Tu 1 . - CDS 263041 - 264510 1754 ## COG2195 Di- and tripeptidases - Prom 264632 - 264691 8.0 + Prom 264613 - 264672 9.4 246 132 Op 1 5/0.000 + CDS 264791 - 266242 1579 ## COG1488 Nicotinic acid phosphoribosyltransferase 247 132 Op 2 . + CDS 266251 - 267018 906 ## COG0171 NAD synthase + Term 267103 - 267163 1.1 + Prom 267033 - 267092 6.8 248 133 Tu 1 . + CDS 267205 - 268182 956 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 268243 - 268292 -0.0 - Term 268154 - 268203 8.5 249 134 Op 1 . - CDS 268265 - 268426 80 ## 250 134 Op 2 . - CDS 268458 - 269234 709 ## COG1865 Uncharacterized conserved protein - Prom 269337 - 269396 7.2 + Prom 269269 - 269328 5.5 251 135 Op 1 . + CDS 269410 - 270339 827 ## COG0668 Small-conductance mechanosensitive channel 252 135 Op 2 . + CDS 270392 - 271222 856 ## COG1686 D-alanyl-D-alanine carboxypeptidase 253 135 Op 3 . + CDS 271278 - 271838 513 ## COG1896 Predicted hydrolases of HD superfamily + Term 271842 - 271886 12.5 - Term 271828 - 271874 9.1 254 136 Tu 1 . - CDS 271986 - 272870 547 ## COG1600 Uncharacterized Fe-S protein - Prom 272898 - 272957 8.0 + Prom 272849 - 272908 9.5 255 137 Op 1 . + CDS 273026 - 273808 1017 ## Vpar_0284 molybdopterin dehydrogenase FAD-binding protein 256 137 Op 2 11/0.000 + CDS 273808 - 274260 579 ## COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 257 137 Op 3 . + CDS 274260 - 276557 2698 ## COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 258 137 Op 4 . + CDS 276599 - 277357 695 ## Vpar_0287 hypothetical protein 259 137 Op 5 6/0.000 + CDS 277364 - 278086 636 ## COG2068 Uncharacterized MobA-related protein 260 137 Op 6 2/0.083 + CDS 278083 - 278895 862 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 261 137 Op 7 2/0.083 + CDS 278879 - 279607 686 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 262 137 Op 8 . + CDS 279597 - 279911 470 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family + Term 279972 - 280015 9.6 + Prom 279918 - 279977 5.6 263 138 Op 1 7/0.000 + CDS 280029 - 280841 1096 ## COG1624 Uncharacterized conserved protein 264 138 Op 2 1/0.167 + CDS 280838 - 281764 1154 ## COG4856 Uncharacterized protein conserved in bacteria + Term 281803 - 281846 9.2 + Prom 281814 - 281873 6.2 265 139 Tu 1 . + CDS 282005 - 283579 2022 ## COG2509 Uncharacterized FAD-dependent dehydrogenases + Term 283587 - 283628 -0.5 + Prom 283602 - 283661 6.3 266 140 Tu 1 . + CDS 283766 - 285118 1766 ## COG1109 Phosphomannomutase + Prom 285361 - 285420 7.4 267 141 Tu 1 . + CDS 285443 - 286138 614 ## COG1794 Aspartate racemase + Term 286173 - 286230 11.1 + Prom 286248 - 286307 6.7 268 142 Tu 1 . + CDS 286383 - 287495 767 ## Vpar_0297 hypothetical protein + Term 287566 - 287624 13.2 - Term 287554 - 287612 3.6 269 143 Tu 1 . - CDS 287615 - 289135 1728 ## Vpar_0298 hypothetical protein - Prom 289164 - 289223 4.8 270 144 Tu 1 . - CDS 289264 - 289458 81 ## - Prom 289546 - 289605 7.3 + Prom 289580 - 289639 1.8 271 145 Op 1 . + CDS 289660 - 291492 2706 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 291495 - 291539 9.1 272 145 Op 2 . + CDS 291549 - 292535 1256 ## COG0180 Tryptophanyl-tRNA synthetase 273 145 Op 3 . + CDS 292572 - 293048 216 ## Vpar_0301 hypothetical protein + Term 293230 - 293271 -0.9 + Prom 293112 - 293171 8.4 274 146 Op 1 31/0.000 + CDS 293306 - 294118 1186 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 294184 - 294234 5.8 + Prom 294138 - 294197 2.6 275 146 Op 2 34/0.000 + CDS 294242 - 294898 754 ## COG0765 ABC-type amino acid transport system, permease component + Term 294912 - 294953 -1.0 + Prom 294950 - 295009 6.2 276 146 Op 3 . + CDS 295051 - 295806 265 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 277 146 Op 4 . + CDS 295815 - 297086 1334 ## Vpar_0305 hypothetical protein + Prom 297088 - 297147 8.4 278 147 Op 1 . + CDS 297256 - 297702 698 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 297740 - 297775 4.4 + Prom 297722 - 297781 4.3 279 147 Op 2 . + CDS 297895 - 298185 350 ## COG0640 Predicted transcriptional regulators + Term 298197 - 298255 17.2 + Prom 298193 - 298252 8.7 280 148 Tu 1 . + CDS 298329 - 299180 228 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily Predicted protein(s) >gi|292596535|gb|ADCV01000013.1| GENE 1 735 - 1106 361 123 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0056 NR:ns ## KEGG: Vpar_0056 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 123 1 123 123 223 97.0 1e-57 MAKKIAVLVNEDTMQRCSCGGCLKAFMNKADSFERYADEDIELVGFTHSGGDLAKKIESF KKKGVTAVHLSTCTRGKNENYESIAEQCAEAGFDVVGYTHGGAVSKDGKEAIVLSAKPVT TDQ >gi|292596535|gb|ADCV01000013.1| GENE 2 1261 - 2433 1597 390 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0057 NR:ns ## KEGG: Vpar_0057 # Name: not_defined # Def: peptidase M48 Ste24p # Organism: V.parvula # Pathway: not_defined # 1 371 1 371 390 619 99.0 1e-176 MNKKLTAATLSIAMAVTMAPTVMQTASVNAASAAVQSLAGGAIAMAYVSTALNKMDNSAE GQQESLARTKEKTGYLNDSAAQERVNRIMKTLEATPSVKRSYVVYANPDEEFNAFATLGR VMSINKGALDTLDDDQLAYVMAHEISHGEHKDIINGAKKQIGLSTAVGIAAGGSEGAAIL SNVAGNYLSNQVFTMSQEKAADELGFKILSESPYNVGGAAGSMAVLRNKVGEHYREGLSQ VVAPNNHPKLSDRVNNNISRMYTYSGNHVNVSNGTVYVNGDNIYTPAGSGRYTGEERAYY MAGKLARLYHNNQVTPGSASYSGDTVTVAGQSIVSTPNADVALQVATNLNNAFVKPAGSA VNAKKPVKVKQEKPKKVKENKKVKADKAKK >gi|292596535|gb|ADCV01000013.1| GENE 3 2464 - 2655 102 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNTYTPDYPYLYGLFITRISLNISYKLINLYSNYKYYNLYKKRTKPSWAQSSDYSHYNN INP >gi|292596535|gb|ADCV01000013.1| GENE 4 3064 - 3675 648 203 aa, chain + ## HITS:1 COG:XF1079 KEGG:ns NR:ns ## COG: XF1079 COG0811 # Protein_GI_number: 15837681 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Xylella fastidiosa 9a5c # 5 196 2 195 220 83 31.0 3e-16 MEYTIHLFNAGGFVMYPLVLFMLAACTILFERIRTYRNINHELQQLSDSIDAGRNSNNWS TLENSIKNSDDALSRFVSPIVESVYSAEGLENRLHDVVGYMDERLKRGLNWLSMMVTMAP LLGLLGTVVGMIRSFAAVGGDIGAPTVITGGVSEALVATATGLSVAIVALAIHSWCTDKV NSDIAKLEQKLGSIMDLYIRSQR >gi|292596535|gb|ADCV01000013.1| GENE 5 3672 - 4076 443 134 aa, chain + ## HITS:1 COG:slr0678 KEGG:ns NR:ns ## COG: slr0678 COG0848 # Protein_GI_number: 16329551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Synechocystis # 9 131 34 156 269 77 30.0 5e-15 MKRSSVGIQKEPTIMIIPMIDIVFFLLVFFMMSTLYMNTEEQIPLNLPKASSSSAKTIEP ITISLTATHKMYLNEREIVPDQLGNEIQGIVAKEPQQAFIVRASEDIAYKDVINILDNLK ISGARFVSVATERK >gi|292596535|gb|ADCV01000013.1| GENE 6 4081 - 4833 1015 250 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0060 NR:ns ## KEGG: Vpar_0060 # Name: not_defined # Def: TonB family protein # Organism: V.parvula # Pathway: not_defined # 1 250 1 249 249 371 94.0 1e-101 MVDKRYGIPFVAALALNLVYWGVVGDWFGHIKPPETPKKDLVINLDMGQQEPPQEKEEPE KLKIQPDDKPVAGGGKAGSVLPNLSGKPTEGLKNLNPYLGGNETASVNLNGNTDNPVGNP GSGNVPGPGGGGVIGNGGLGNEGNGSKGGDPGPGDVERRGGSYDSSGYIARVESNKVMPQ QAVRRGLSGRVSFEITFDADGNFAGANMIGSSGSSILDNAAASLVESSGGIENTTGEPVT IVVNVDYGFN >gi|292596535|gb|ADCV01000013.1| GENE 7 4964 - 6070 1399 368 aa, chain + ## HITS:1 COG:VC0475 KEGG:ns NR:ns ## COG: VC0475 COG4771 # Protein_GI_number: 15640502 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Vibrio cholerae # 42 244 27 224 652 91 33.0 2e-18 MTSRRILSAAIAATLALGTYQAYAYDENFKGYEVHNVSVKADAAKDEYGNTITEQSYYRT GGDVKVITREEIEKRHYRDVTEAIKRVPGVTFQNPGYRGGEYGYQFYNNGVSINGDSRVV VLVDGRRVDNITSGRLGDSSERGSKSTGVNIDEVTNMDAIDKIEVIKGPGASQYGSDATG GVINIITRRGKGNFSGSVDLATGSWNKHSYNLTVQGAAGKNASTGYFVTATRTMSQDTKY KDGDTGEVATLTGSKWREEGFNARIDHEFNKKQSLQFSMNFKKGRDGYPISTPSRKYWNA DDWRRIIFNAEVGQYDTNYKLKTDPKYVDPDENPQGYAPKLYGDSRNPGYHNLFALDGNY GSYSKFKN >gi|292596535|gb|ADCV01000013.1| GENE 8 6079 - 7416 1194 445 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0061 NR:ns ## KEGG: Vpar_0061 # Name: not_defined # Def: TonB-dependent receptor plug # Organism: V.parvula # Pathway: not_defined # 1 445 373 817 817 831 98.0 0 MKFTFDRQGQMESFARLYRLDHRYEGRDTYTWSKLGSEAARAAYAAAFPNGATVEQFNAW VDSNLAPFPDRRDALRQWIAETGGMAGSPNRWYKENKTGVELQWTRQLDKHDIIANIDYS RSNLNSRSIKRNGDVVSSDIRRNTLYAYLQDKIYIGNNVELTPALRYVHYSSIQGNGSGD SQGKGSVSALTPSLHGQVKFNKKTSMYAGWTRILRPLKTGDYSATDGVFNTPLDDERGDA FTWGLLHTFGKNNNTTVAVHYDYTRMKNAIATLPIWNGRSGEFEKTAVNAKENKQSFNIT VDHRLNEHVTMSASYSHMKDKWLSKGGWILDPNWGYSNSDDINVAINSLRPQNHYALNIS YDNKRLYSGLLINWYTGNSDYAFTHRRFLIVDWNLNYDVTKDLTAYIVVNNVLNRAYETS YSAYNGRGSAAMPARSFMIGAKYKF >gi|292596535|gb|ADCV01000013.1| GENE 9 7416 - 8438 1009 340 aa, chain + ## HITS:1 COG:FN0885 KEGG:ns NR:ns ## COG: FN0885 COG0614 # Protein_GI_number: 19704220 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 59 327 19 281 286 85 26.0 1e-16 MIRFSALILCLLLCVGCGPQQVTVEDHQSTSTHIELQPPVTIKSYVRRGEPFESTYTAVP ERVVAMWQNSIETIIALGEGNRIVAGMGIPDRKYVRPEYREAYDKIPYKDLKYANLESVL MMKPDLLVGWRSTFTNKGLRPPAFWQSRHANVYIAESSLGAQSALTMDMEYQYIRDLGRI FNRNMEAEKLIHDMEQSVAHTVAQTAHEKPPKALFVEVQGKHFRLYGHKTLAGNIGDSLH ADVIDTETPTISMEDVIEQNPDVIFLIVSDGEYSQADVIMNYVLTQPGLQGVNALRNKRV HFLPLLAVYSPGIRLSDGIDIVSHGLYPNLYSEGVPDLIH >gi|292596535|gb|ADCV01000013.1| GENE 10 8451 - 9497 1114 348 aa, chain + ## HITS:1 COG:FN0884 KEGG:ns NR:ns ## COG: FN0884 COG0609 # Protein_GI_number: 19704219 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 24 348 25 345 345 209 38.0 4e-54 MLKRIGYTAGGFVLIGVLAVAILWGLSVGTVQFSLSQIFNIVMDQFSSPLAIDDPMNGPE QTIIWLLRMPRLLMAAIIGAGLAVSGVIMQAIVKNPLADPYILGISSGASLGATVAILFG VGVMFGENFVGVMAFIGAMAISFGVLFISNLGGRPNSVKLILGGLALSAVCSSFSSFVVY LADDKEGIQTITYWLMGSFAGAKWDMLPFIAIVVLVSILFFWSQSRVLNIMLLGDEVAIT LGRDLHRYRQVYLIISSLIIGFVVYAAGMIGFVGLLIPHLVRMTIGTNHWTLIPFSALGG SIFLVIADGLCRCIIPHAELPIGILISLIGAPTFVYMLVRKNYGFGGE >gi|292596535|gb|ADCV01000013.1| GENE 11 9497 - 10258 252 253 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 222 2 226 245 101 29 3e-20 MNIQTDNIQVSFGPKTILHDISLDIRDKEFVGIIGPNGSGKSTFLKCLYRVLQPNHGKIF FDGTEMSSLSHRDTALKMAVVAQHSTVNFDFSVLEMVLMGRSPYKGLLDRDKIDDYEIAR HALAQVGLSDFESRNFNTLSGGEQQRVILARALAQRTECLVLDEPTNHLDIKYQLELMTI VKRLDATVVSAIHDLNLAAIYCDRLIALKDGSVVCTGPPHEVLTEETIRHIYGVSATVQT LPNGRLNIIYNME >gi|292596535|gb|ADCV01000013.1| GENE 12 10280 - 12220 1792 646 aa, chain + ## HITS:1 COG:VC0475 KEGG:ns NR:ns ## COG: VC0475 COG4771 # Protein_GI_number: 15640502 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Vibrio cholerae # 1 631 1 637 652 88 24.0 5e-17 MKRMNKQVYVAVLMALTTMSINSYAADVTMNNNEEEVTINVTANRTALLDLDTPVSTSVI TQEDIQNSGAKTAFDAVANVPGVTINSFSASGADFGGMDSRTNIRGLDRGALVLVNGVPM NLNGKSGIGSMPTSAIERIEVVKGAASTLYGAEALGGVINIITKTPSKEGGSATVAVGNR GSKRFDISYGTDRFLVGIDRKYWGTQDPSTPVRYDYTGRKGYDYYTTRNKGNSLDVFMSG KLSDKITLNYSRDESRSSFGLISTETNPMRQARHSTTYHYKDDRNNASLIYKDDNTTGTL FYNDRTMRGESRVHSAKQFKPTETSYVARQYGIDVQHEWDFRGGKDYLIAGVTGKQETYR ATQAPVYTRPHRNTYAVYSSYSREINPKWTAILGLRYTAISDPIKDQHVLTPQFQLLHTI NKDSSMYLNIGKAYTMPSLSDTFRSVNRQYTAVSGKNLKPEEGWNYELGYKRLNKKDSWK VDVFYMDFKNFFQWQPDVNGRPTVRVNGGKFHNVGIEAEYSRHLSDRLKMSVSGSYSNPK QKEMNETYWKQAAPKLQFTTGVHYKSSTWDAGTSLNFVTKRLRNRDGGLNPNIALWNAYV GYHFNKDATLRLDARNLLNRHNVVSNGDYEYWDAPFNYELSYTQKF >gi|292596535|gb|ADCV01000013.1| GENE 13 12364 - 14346 1845 660 aa, chain + ## HITS:1 COG:YPO3910 KEGG:ns NR:ns ## COG: YPO3910 COG4206 # Protein_GI_number: 16124042 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Yersinia pestis # 20 572 1 536 625 82 22.0 3e-15 MRQQIKHRISILVGLALIGLSVNGYAAEVSADKTPTTAASSESNGASEIHTINVTANRMA LLDLDTPAAMDVITQKDLANSGAKNAFDAVNMVPGITSFSYGASGLEYGAMDSRVNIRGL ERGSLILMNGVPMNLNGKGGLSSIPTSSIERIEVLKGAASALYGADAMSGVINVITKTPS KEGGSATIGFGNMGRQTYKINYGTPRFLIGVERNFFGAQDPETPIRSDIGGYARGYEYYT ARNKGNSLGVFMSGKLNDKLTLNFSRFEGNSSFGQLSTETNPIKQKLHSTTYAYKDTKNN ASLVYKDGNTTGTIFYNDRDLYGKSRVHSKKAYTLSDNNYIARQYGFDVQHEWDFRGGKD YFIAGVLGKRETYRTTSGPYYGNPHRNSYAVYGTYSYQINPKWTSILGLRYSDIKDPVKN QRVLIPQFQLQHRINKESSMYINVGKAFRMPNLSDTFKKINKGYASVSGRNLKPEEGWNY ELGYKHITNKDSWKVALFYMDFKNFFSWKPDSNGKNTIRVNGGRYRNVGIEAQYDRKLTD HLKMTVGASYSNPKQREIDKTYWKQANPKLQFTGGIHYNSSTWTAGTSINFVTKRMKNRD GGINPNLVAWNAYVGYQFNENSSLRLDARNLLNRHNVISNGDWEYWDEPFNYQLSYTQKF >gi|292596535|gb|ADCV01000013.1| GENE 14 14390 - 15343 448 317 aa, chain + ## HITS:1 COG:lin1061 KEGG:ns NR:ns ## COG: lin1061 COG0614 # Protein_GI_number: 16800130 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Listeria innocua # 14 289 11 277 297 87 28.0 4e-17 MNKKIGFFICLMILLCVCLTGCGPQSEDGVTPYTRYVESHDGVQVAVPEHPKRILSLSSA FDTILLGLIEPERLAGINKLSTYEEYSLEAKRAKLVKPVLSSYPLEKIIALKPDLVIAPD YISADVIYGLRHMGIATVVVPTPSTVDGVIQNVMEIAHIIGEDEKGSFYNRKIHREIDEI KHLAESIPLEQRKTVLFVSSMDGYTGTGSLFDDMCHYMSIYNAPDRIGLPPRIPFGEELV LAMNPDYIFIPSYKGMDKNLADRYLKNPAFQNLPAIKENRVKPLPAAYLYTMNQHIGEAM LAIMHTVYPQLERNSHD >gi|292596535|gb|ADCV01000013.1| GENE 15 15336 - 16373 1338 345 aa, chain + ## HITS:1 COG:FN1969 KEGG:ns NR:ns ## COG: FN1969 COG0609 # Protein_GI_number: 19705265 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 25 343 22 338 341 240 43.0 2e-63 MTKQKQRIMAITLIGVLLCIVSLLALHVGTIMIPIGGGVQSILNGMGIPVSFTEPISAEQ EAVLWFIRMPRLIIGLLVGGALAIAGAVMQGVFSNPLADPGIMGVSAGASLGAVIAIALG VTSLGMFYMPAFAFVGAFVSVGITILLTWRNNKLDTTTLLLAGVAVSMLLGAFTSGILTM INEYRLREFLFWMVGGLDYRRWDHVLLAVGPIMTGSVILMMLGRHLNVLVLGDTEARALG LPVMVYRMLFLFLASVVTATAVCVSGSIGFVGLVVPHIVRILVGPDHRILLPMAAVGGAL FLVFCDTLGRVIAQPVEIRVGIMTALLGAPYFLYLLHRLRRKGGA >gi|292596535|gb|ADCV01000013.1| GENE 16 16373 - 17218 1032 281 aa, chain + ## HITS:1 COG:FN1968 KEGG:ns NR:ns ## COG: FN1968 COG1120 # Protein_GI_number: 19705264 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Fusobacterium nucleatum # 3 242 5 244 257 224 43.0 1e-58 MKLDVQSLSVTLGDTTIVKEASFAIDRGEFVGIIGPNGSGKTTLLKALRGLYPTSGGDVL WDGKSISSLSDKEIAHHVAYMQQSVNVSFDYEAIDIVMTARYPYLKWWEQEGPEDKVIVE QAMKEVGVYHLRNRSVQSLSGGERQRVFLAKALAQQTEVLLLDEPTAALDLVYADDIFHE GRRLCDEGKTILIVVHDLELAAKYCTKLVLVSDGHIVDVGAPRDVLTAENLRNAFRLSAA VYDDPYFKQQRIFVFPKGTTKIDDFKQTEVTSEMSIDPNLK >gi|292596535|gb|ADCV01000013.1| GENE 17 17315 - 18244 1075 309 aa, chain + ## HITS:1 COG:MA0877_1 KEGG:ns NR:ns ## COG: MA0877_1 COG1239 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlI # Organism: Methanosarcina acetivorans str.C2A # 3 303 9 340 384 341 52.0 1e-93 MLYPFTAIVGQDEMKLALLLNAINPSIGGVLIEGEKGTAKSTAVRALANLLPPMETGASA MSVVELPINATEDRVVGSINLEKALQEGVKAFEPGILHAAHQNILYVDEVNLLDDHIVDI LLDVAAMGVNTVEREGVSHSHPSRFILVGTMNPEEGDLRPQLLDRFGLSVMVYGEQDPAQ RMEVIKRRLAFGDNAESFVASYKESERSLHERLLQAREVLPGIIPSDDVLLQIASISIGV GVDGHRPDITMMHTARAHAAFHSRNQITAEDLKVAARLALKHRLRRLPFEEQGYDEERID TVVSAVLEG >gi|292596535|gb|ADCV01000013.1| GENE 18 18247 - 20274 1294 675 aa, chain + ## HITS:1 COG:MA0877_2 KEGG:ns NR:ns ## COG: MA0877_2 COG1240 # Protein_GI_number: 20089761 # Func_class: H Coenzyme transport and metabolism # Function: Mg-chelatase subunit ChlD # Organism: Methanosarcina acetivorans str.C2A # 378 674 43 304 320 188 40.0 3e-47 METSVQEALEIGLVNDQIHTIVISGGTGVGKSYVLRQCLEKWQIPYRLIPVYIDTSQLQE SIDFEASFAQGKMVMASGLLGDTSNRCWVVDDAHVLSPEVRHALLVEAKRRQILLIMTIN HEDRTLDDAEWEFVDVHVSMDAPTLQSKVKVLQRRRDEIEPSSEDLLSLIDSKRVQSIVV PDAMLSLAISYALQARTVGHGAEYVLLQVMKSLAVLDGSSYCKPSHAERAALYVLPHRMK RNDTPESQTSQGETSNSASDQNQLQENTESATDDSDVDDSDNSDSRDSKRDESHSDELNA NGLDNSNSDGHDGSSDMDFDDCKSKESNHSETLESTANEWGTSDSMNTYSDTSNGISSLC LPDTVARIANQFFQWKLQSSKTVDRQYRKGSGRRLMTKTKDTRGRMIRAYQDEQALEDLA LIDTLRAAAPYQRLRAVERVKQLQVDTPLNVVEQSVTSECLCQMDPQAERHDLKGLSIVV KPQDYRRKAREKRIGAYQLFVVDASGSMAARHRMEATKGAILSLLRDSYVHRDSVGLIVF RKDSAEILLPFTRSVERAERLLATLPTGGKTPLAQGLRVAYTMCDRLLRRHSAERIQMIC ITDGRATSGASEDPVGEAKQWARILGTLPVYCIVIDTETGFIKLGLAKELCKLMNGSYYA MDSITSDSILRVSRR >gi|292596535|gb|ADCV01000013.1| GENE 19 20278 - 23901 2716 1207 aa, chain + ## HITS:1 COG:MJ0908 KEGG:ns NR:ns ## COG: MJ0908 COG1429 # Protein_GI_number: 15669098 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CobN and related Mg-chelatases # Organism: Methanococcus jannaschii # 100 1205 105 1229 1232 786 38.0 0 MSRLLYISNLGKQIQYIEKAVATYPELLQGEVDLCNMKKPPQWDADFESRLRAADVVLVT NMGVGLDSPFLERLERWLYAHHPKYWIDVVEPKKTDILYRNLDEDKRVLLESYRRTSGVM NYVRLINGAFSTKPTSEWEEPDPIPWQAIMGREGNIYETYDEFMDAEGHRDWPSIAVYFY RDEWIMGDIEYQQALFEEIYKHQYNPIIFYGQYGSNPRVGIPNMKLSMNHLFGKNEFPFD VLINTCKFSFQSLGAQTLEELKLQDVPIVQGYTIYMDEKSWAENPQGVTPLDVNLSISQP EIDGVIQGGVVACQTYDERGHYVYLPVKERIAAIVQRAIKWSTLRHIPVSERKVAVILHN YPPKNSNIGSAAGLDTPESVLRLLRDMKAEGYTIDTVPETSADLMDVVTSHMTNDRSMLT DELLASAEGRLSSDDYKSYFATLPEDTQTAMVKSWGEAPGDVFVYDDDVIIPGFSNGNLW ITVQPPRGFGENVSAIYHDPCLPPPHQYLAFYHWVRDVFEADAVIHVGTHGSLEWLPGKG AGLSASCYPEIGISSLPNIYPYWTTIIGEGIQAKRRSSACLVGHLSPPMTTAGLYDEFEE LEALLDEHSHFEREHPESVSTLGEVIREKAMECHLIDKERGSTMTVDDIITEVHEKLSDL KHMQMRNGLHILGQGPEGEALEEFITAIVSTPQGEIASGLATIAEELGYDWSYMAEHAGE IHLDGIRYSVTIDRIWNELRSFVRHVINIPDYTVLERLEPLANAIVREYIPKLGDTKNEL TSISNALQGRYVEPGPGGAPSSGQVDVLPTGRNFYGLDERALPTKIAYQLGIELADQVIA DYILNEQRYPETIGIILWATSNSRSHGQCLGEFLYLLGVRPKWQSGGRVSGLEVIPLEEL QRPRIDVMGRISGLIRDMMPTAIGWLDKAVEMVAELDESLEDNYVKKHIHDDVDWLVEQG EDPLLATKKARLRIFGDPPQAYGTGVGALIEGKNWESLQDIAQVYSKWSSFHLHKDIPQD MRLFQRRLTTMDVTIKNEDNRETHIMSADDYYSYHGGLIAAVQTAKGSAPRAYVGDSSDR SRVVMRPLGDEIRRVVQGETQNPKFIQAMMKHGYKGASDMSNVVSHSFGWDVTSDVVPDW VYEGYANKYALDKTVQEWMRNVNPWALQRITEILLEASQRGYWDASPEMLQDLQSLFISM EGVIEGR >gi|292596535|gb|ADCV01000013.1| GENE 20 23903 - 24814 797 303 aa, chain + ## HITS:1 COG:FN1970 KEGG:ns NR:ns ## COG: FN1970 COG0614 # Protein_GI_number: 19705266 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 52 301 21 276 280 145 32.0 1e-34 MKQRISIICTIVMMVLLVVGCGPTQTGTTGTTHQVTDGTGLTVTVPSEPKRIVPIAASTE DIVLSLVDPSRVAAVGTVPNNVPDESAKVGKHVKATAESMLSVQPDLVLVPNWMSPDAIG EMRNMQIPVYVYKTPTTVEEAKAVIHEIAGLLHASDEKMIASMDADLKTVEELANKHTGE RPVVAFYTQFGLTGGKGSTFDDMTKYLKVTNAAAQLGLGPFDNGTREDLIKANPDIIIIP SVAYTSDGTTPATAEQLYSDPALQGVKAIANRRVFLVDSSQVMSYSQFMTRAMVSMAQNI YSM >gi|292596535|gb|ADCV01000013.1| GENE 21 24835 - 26703 2163 622 aa, chain + ## HITS:1 COG:VC0156 KEGG:ns NR:ns ## COG: VC0156 COG4206 # Protein_GI_number: 15640186 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Vibrio cholerae # 28 592 17 590 611 151 28.0 4e-36 MKVSRMQRLSMYVGLALVFGSTLSAPSVSAVDAGEAKEAHTIVVTATRSEQQLSEVPASV GVVTGDDIRERHATNMNEALNIVPGVDINTYGGGVGYTNSNAFRINGSDQVLYLVDGINM GAAGVNPPMTILKDMSSIDRIEVQRGAGSTLYGSGAIGGVVNVITAKPEQGVQTKLRVMG GSNDLEQYAITNEGSQNNWYWRVGVQKDIIGSYKDGHGVRIPQHGNSHTASFMVGNKIND KNDVKISYDTYRGDVMYSDHLGALNHIRYGNEANDSLRAIWNNKISNRWSHQLYLMNNHY KTTYDGYLTDVKTRGIGDQVTYKAKDHTVVGGFDWRQDKVLNMGGVKLTNTSYFIQDEWK FAPKWTVTPGIRVDHHSSFGTHTSPSISLGYDVNEKTNVYAAYKEYFLAPTPYQLFDGFN GNRNLKPETGHEFDLGVHHKFGKTWNSNLSFFSRSTKDKIGWVMTDPANFTGQYRNFDTE KARGINADVRKQLTNHLSARLGYTYTHIDATPTRKANRDGYVPKHAVNAGLDYNDAKWDA HLDIRGIINRPGPADNVFPRKTYWLADISANYRVRENVTIFGRINNIFDTYYAEQSSVRW GNPGDWWPGQGRNFRLGVEVTI >gi|292596535|gb|ADCV01000013.1| GENE 22 27140 - 28462 1361 440 aa, chain + ## HITS:1 COG:CAC1001 KEGG:ns NR:ns ## COG: CAC1001 COG0436 # Protein_GI_number: 15894288 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 64 434 55 393 395 124 27.0 3e-28 MKQPELSPYMMARKPSGIRLGQIKFLERKNPPILVNGSIGNVMRPMHPAMQRRLFDLGGV NSPFHNGIVPYVPTTGTDECREAFLHILRSQGFDTTGLDVLVTDGASMAMEIIMLGVCGG AGEEERPLLMFNPSYTNYDAVGLRIGRKTVTVERELNENGEFELPSVETVEKRIIDTKPG ALLIIPYDNPTGQLFSKETLIEYTKLCVKHNLWIISDEAYRELAYEKGKETSSIWALTDK DVPGIEGRRISLETASKVWNACGLRIGAIITDNKLCYEKSVAEYTANLSANTLGQYIFGA LKHESYAQLHNWYEQQRDYYRQMIFELHKGFKEVEPDFIVSRPEASIYFVIDVRKVAKPG FDGVEFASWCAEHGAVSLDDGKEYTLLMAPLNGFYSGKNGDNNPGKTQLRVSFCENPELL RLAPELLSKLFRAYEAQRNV >gi|292596535|gb|ADCV01000013.1| GENE 23 28632 - 29093 389 153 aa, chain - ## HITS:1 COG:SMc01226 KEGG:ns NR:ns ## COG: SMc01226 COG0640 # Protein_GI_number: 15965318 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 1 95 1 89 96 82 41.0 4e-16 MDPLKILKALSNPHRLDIILWLKHPEKEFGVQVHANTLIDFPYSVSVKSIQKRCGVSQSS ISTFMSILENAELVESRKIDQYTYFRRNEEVIREFGEWYNKEVSIQSDEIDKLLETVILE DTSYPSTEESSIPSEQLAVEIRTKGPHHDEESK >gi|292596535|gb|ADCV01000013.1| GENE 24 29437 - 30789 1564 450 aa, chain + ## HITS:1 COG:STM0077 KEGG:ns NR:ns ## COG: STM0077 COG0644 # Protein_GI_number: 16763467 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Salmonella typhimurium LT2 # 22 450 4 428 428 384 47.0 1e-106 MNLCKSKLSFKGAEYMAIDRNEIFDVIVVGAGPAGSAAALRLAEQRVKVLLIERGTAPGA KNMMGGRIYTHSLERLVPDFRDRAPLERKVTKERISIGTGNEMTTIEYSYEDGEPNEESY VVLRAKFDKWLAEEAEKKGALLVSNVQVTELITEGEGKHRRVIGVRCHDDEVYAKLVVIA EGSNTLLLEQAGLTGPTDPRTMAVGVKEVYKLKKEDLENRLMLSGDEGMAWLTLGDMTDG LLGGGFIYTNKDSLSVGMVVGLEDIGKATKSVDDMLLAFTNHPRIAPLLKNGQLKEHSAH LVPEGGFKALPKLGGNGYVIVGDAARMCMNLGYTIRGMDLAIESGMCAADAVNVALRDEN MERVAKLYERQIKNSWLYKDMKLYKNMPAFLASNPRIFKEYPALVNNVMRDVFTVNGDGA VPMMKKLMSSVSDVGLVTLIRDAWKGVRSL >gi|292596535|gb|ADCV01000013.1| GENE 25 30786 - 31064 329 92 aa, chain + ## HITS:1 COG:STM1351 KEGG:ns NR:ns ## COG: STM1351 COG2440 # Protein_GI_number: 16764702 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Salmonella typhimurium LT2 # 1 92 7 97 97 107 53.0 6e-24 MKLEERLGANKYYVDETSPHIIVDGAGFGLEEKMKLVNGCPAGLYTLQENGDLAFDFAGC LECGTCRVLCGETIVKTWKYPRNAKGVEFRQG >gi|292596535|gb|ADCV01000013.1| GENE 26 31069 - 32058 1184 329 aa, chain + ## HITS:1 COG:CAC2710 KEGG:ns NR:ns ## COG: CAC2710 COG2086 # Protein_GI_number: 15895967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Clostridium acetobutylicum # 1 259 1 250 259 225 48.0 7e-59 MELLVCIKQVPDTSEIKLDPETNNLIRTGLPSIVNPYDMHALEAALAVKDQYEGSRVTVV TMGPPQAEAALRECLSLGADDAVLITDRAFGGADTLATSYTIASAIRHIQRTMNREFQII FCGKQAIDGDTAQVGPQIAEELGMAQATYACELSVDQAAQKAIVKREHENGYEIVEVPLP LLVTATAELNEPRQPGLWSSIYAKRYTITHITLRDMPHIDESRIGLNGSPTRVRKVYQPP LRGKVEMLSSVDEGAKKILELAYNIKPEKFSHLLVPSEELVEEPVDTNDEGVDVKDPVQR AASVESVSSSEFKVLAAVKGEEGSKGGDR >gi|292596535|gb|ADCV01000013.1| GENE 27 32058 - 33059 1307 333 aa, chain + ## HITS:1 COG:CAC2709 KEGG:ns NR:ns ## COG: CAC2709 COG2025 # Protein_GI_number: 15895966 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 5 333 2 332 336 286 45.0 3e-77 MGVTNFDEYRDVFVVADTIDDVVHPVTYELIGQARRIAKELGQLVQVMLLGENVQSEAEE LVAHGADIVHVFESPLLKYYTTDGYTKVLTDFFEDHKPNILLIGATNNGRDLAPRMSGRM KNGVVADCTILTVDTEEGLVEWTRPALGGNILAEIISPNHRPQMGSVRPNVFKKPERIAD SWGRIQIEPFDLKPEDIRMKRLDFIPFSKAGYNIQEADIIVAGGRGMGSKENFDKLYELA DAIGGVVGATRPLVEKGWIELPYQVGQTGKTVSPKLYLAFGISGAIQHVSGISGADTIVA INNDPNAEIFQHANYGIVGDCMEVLNDMLAHLK >gi|292596535|gb|ADCV01000013.1| GENE 28 33238 - 33366 98 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDSSPLRVPHSPTPQNDILTHFKVKRIEMKKDYRSENDFPFV >gi|292596535|gb|ADCV01000013.1| GENE 29 33427 - 34185 980 252 aa, chain + ## HITS:1 COG:SP1909 KEGG:ns NR:ns ## COG: SP1909 COG4221 # Protein_GI_number: 15901734 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Streptococcus pneumoniae TIGR4 # 1 252 1 253 253 271 60.0 9e-73 MARNVFVTGATSGIGLCIAEAYAKYGDNVLISGRRAEVLAEVQARLSKEYGVRVETLVLD VRSREDVESKVPAAIEAFGGVDVLVNNAGLAQGLDPFQDSTVDDAVTMIDTNVKGLLYVT KAVLPYMIDKNAGHIVNMGSTAGIYAYPGGAVYCATKAAVKMLSDGIRMDTIATDIKVTT IQPGIVETPFSEVRFHGDAERAKAVYAGIDAIQPEDVADVVLYVTNQPKRLQISDVTIMA NQQAAGFMVHKK >gi|292596535|gb|ADCV01000013.1| GENE 30 34298 - 35059 560 253 aa, chain + ## HITS:1 COG:CAP0001 KEGG:ns NR:ns ## COG: CAP0001 COG0300 # Protein_GI_number: 15004706 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Clostridium acetobutylicum # 3 248 5 250 251 265 56.0 9e-71 MKKYIVITGASSGIGAATAKAFARRGENLIVIARRAELLENLKDEIANISPDTDVIVKPC DLSRSENVLALWDDLKSYELKALINNAGFGDFGFMGNHDIQKMVKMIDLNVTALAILSSL FVRDYKCKQTQLINVSSVGGYFLAPGVVPYCGTKFFVSAFTEGLYHELAQDVDAKMQAKI LAPAATKSEFCDVASGKSGFDYDASFEKYHSSEQTADFLLTLYDSDACVGEVDLTSFEFK LSGPKFNYLAAAK >gi|292596535|gb|ADCV01000013.1| GENE 31 35327 - 35914 695 195 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0083 NR:ns ## KEGG: Vpar_0083 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 195 1 195 195 373 97.0 1e-102 MLKKFVLMAVACACVGSYTVAGAQGTFDVKPDQPKSVVAQQEAPMVGMPSPFHEFSTVDE AARYMNIIPQMPKVLPVGYNIESVSTIDKDVLQVVYVYQAGEDATRNQAAGKRIVHRIAN EIKEDISGDYNDFRVTANEKVNGTKVVFKGGNKMVYLIGWTKDGQTHGMYFERPVTRDMA KAIVANTVAPKQHTK >gi|292596535|gb|ADCV01000013.1| GENE 32 36147 - 37097 717 316 aa, chain + ## HITS:1 COG:FN1113 KEGG:ns NR:ns ## COG: FN1113 COG0601 # Protein_GI_number: 19704448 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 1 305 1 305 312 236 37.0 4e-62 MYRLILQRLASIVGILLVVTIGTFVLIKLSPIDPVSMKFNLVGATPDPVVVAQIREQLGL NDPWWQQYVRWLGQLVRGDFGESILYAVPVATLLKGALPNTLGLVSLALVMGIVVTIPLG MLSAKYQDSWIDHGVRLVTFLALAIPGFWVGLLLLYLFGVKLQLVSITNTNGFSAYVLPA VTLALWICGLYIRRLRNAILEVSRQPFVQGARALGLPEWMVYTRYIFPHVGLMLLPMMGV TMGAMLGGSAVIETVFSIKGIGYMMVQGIMARDYVLMQGYIIWITLVFIVINIIIDVLSV WLNPKRRAAIKGGSYE >gi|292596535|gb|ADCV01000013.1| GENE 33 37090 - 37899 781 269 aa, chain + ## HITS:1 COG:FN1112 KEGG:ns NR:ns ## COG: FN1112 COG1173 # Protein_GI_number: 19704447 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Fusobacterium nucleatum # 28 266 29 267 270 203 43.0 2e-52 MNRQKPYTLYAMLVLAALWIVFFLCAPYIAPFDPETTSIADRLQDISSTHLLGTDQLGRD VWSRILYGGKASLGIAFTIIGISGAIGIAIGGLAGFSTPSIDRWLSRLIDLVLGFPNMVI AIAFIGIMGPSITNVIISLCITKWAEYARITRGLVQIERHAEYITFARMSGASNLRILWR YILPNVLPPLVIVIIQHLGDAIILVASFSLIGIGVQPPDPEWGAILLSSRDFLQTAPWLL IYPGLAIFITVVLFNYIGDALRDALDVSR >gi|292596535|gb|ADCV01000013.1| GENE 34 37966 - 39489 2180 507 aa, chain + ## HITS:1 COG:FN1111 KEGG:ns NR:ns ## COG: FN1111 COG0747 # Protein_GI_number: 19704446 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Fusobacterium nucleatum # 2 507 21 537 538 419 43.0 1e-117 MKRWLLACLSMLCMVALLVGCGNDTAKDGKQGKHMNVGLYWFGETLDPTHEWDAWTLTRI GAGETLATVTPDMKFTPQLADSWENVDPTTWKFHIRENVKFHNGTPMTPQKVKESIEYTM KQSARSAKAVKIESITVDGQNLIIKTTEPNGSLLSSLTEPAFVIMDTADLKDVASKPVLT GPYKITAFKKGETIELAAFADYWGGKPGLDTVTVKDIEDNNKRAMALQSKDVDVIQKVDS ANRSLFKDGFNIQDVAGVRVFMLKANHTEASPLHDKAVRSAIAHIINYDSMAKIIGNGST PGAAPFPPSANLGYDAIANKPMTDVAKADQILTQAGYAKNANGMYAKDGKELAITIAIWG KDTSLYEEIQQELKKAGIAVTLKKLQSPDEVDTLGTDGFDLVERNVVTMSTNDPYWFLSL FYKTGAKANVGGYTNSQVDALIDQLSVTFDQNERSNIAKQAQQILVDDVADIYLLYPSAT VVSTTKVKNVPVHPIDYYLLTKDSTIE >gi|292596535|gb|ADCV01000013.1| GENE 35 39482 - 40249 382 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 17 251 33 265 329 151 36 3e-35 MNKSDCIVFDKVTISYGAEQAVRDVSFSVPNGEVFAIVGESGSGKSTLVRAAFGMFKQAT ISGQILLNGTDVSTLSDGDWRQLRGTKISMIFQNPSAYLNPNRTVENHFKDLFCAHDESY DVSRVIDMLNLVHLTDGERILQSYPFQLSGGMQQRLAIALSLILKPSIVFADEPTSALDM LVQASVLDLMKEVTQALGATVIIVTHNIKAAARIANSIGVMNKGQLVEVGSTEEVMAFPK DEYTRILLDSVMKVV >gi|292596535|gb|ADCV01000013.1| GENE 36 40251 - 40991 317 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 244 278 522 563 126 31 7e-62 MIQLENICKQYTNHNHTVRAVDDISFSVAENERVGIAGGSGSGKSTLLRIIALLEKPTSG TLRLFGEDIHSIQNHTEIYRSMQMMFQNPLAVIPPRMNLEAFLLEPYINYGLMDVASAKD DIRKWMQRVDLPENTVYKYPHEVSGGQLQRVVLARIMLMNPKLVLFDEPTSALDAVNQKL VLDLLQKLHSEQPFGYVFVSHDIGLLQAVTDRIIVMKDGQIVETIESKRLKEAVHPYTKS LVEASE >gi|292596535|gb|ADCV01000013.1| GENE 37 41213 - 41701 481 162 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0090 NR:ns ## KEGG: Vpar_0090 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 154 1 148 156 133 50.0 2e-30 MELIDEFLAVLRESLDMLHNNDQYLINYEADEPVKNDEHVSELSISHKLSHYLELFVTEY HVDCEYNRNVADKKSMGESRIRPDIIIHKRGNNEKNFVVIKIKPWWNRDDVIKDEDKLAY LTNQDNEFKYKYGLSLIIEQSRLDDKAKIYENGEAQGDYIRV >gi|292596535|gb|ADCV01000013.1| GENE 38 41759 - 42106 589 115 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0091 NR:ns ## KEGG: Vpar_0091 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 115 1 115 115 174 90.0 8e-43 MTHTQLTQLVQALLDAPTSNETVKEFAQSWINAEGTPKQEELTKQLVSVAEQNIALIDET IGFAGSELATQILGAESAANLLQHAKDIKAEGAKFCDCDACVAAKNIIDLKAELE >gi|292596535|gb|ADCV01000013.1| GENE 39 42334 - 42606 257 90 aa, chain - ## HITS:1 COG:STM3516 KEGG:ns NR:ns ## COG: STM3516 COG3041 # Protein_GI_number: 16766804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 7 90 9 91 91 86 50.0 1e-17 MLRLVLSSKFKKDLKRSKKRGKDLNKLYSIINKLQNQTLLDPGYKDHPLTGNYEGFRELH IEPDWLLIYAIKDDILVLSLTRTGSHSDLF >gi|292596535|gb|ADCV01000013.1| GENE 40 42613 - 42894 465 93 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0245 NR:ns ## KEGG: HMPREF0868_0245 # Name: not_defined # Def: putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 93 1 93 94 116 64.0 3e-25 MAKTASISLRIEPAVKAQLEALYASFGISVTDAINIFLHTSLMEGGFPFQPKQPRYNAET EAAIQETKDILAGKVKAKSYANVKEMIEDLGLE >gi|292596535|gb|ADCV01000013.1| GENE 41 43080 - 43712 732 210 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0092 NR:ns ## KEGG: Vpar_0092 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 207 1 207 209 391 88.0 1e-108 MKKVVCMLATLAFIGSINVVSADELMRFRLNGNSIYDQPYGDRNEFPCPNGLGSCTITDE DYRSTRKGQSLEVFDTLYEAKQHLNFKPQLPSGLEGLRPVHVSIVDHDVLQVVYAYHELL KGIYFDRVDDMPQYIKYRVSTVSGNIAGDYKDYVPQKTEIINGMTITYRMVDDAVYLASW EHEGQNHVFLFNEPVSVERAREMINSVGTN >gi|292596535|gb|ADCV01000013.1| GENE 42 43883 - 43960 126 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTNHEVTYVIIIVLLSVVTIIALVK >gi|292596535|gb|ADCV01000013.1| GENE 43 44100 - 44513 180 137 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0093 NR:ns ## KEGG: Vpar_0093 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 135 1 135 135 215 81.0 3e-55 MNADNYKISTLPYIENASNEIMEKYNIKAQYETEPPHGDAIYSISIKGKALPFWIYGRDV TFIGSSMVMVESVRCKTWDPIETIIIDLENDVYASLKEWYTDISFVNNRIELTNQVVKMD KRILNNFEHLEWISFLD >gi|292596535|gb|ADCV01000013.1| GENE 44 44649 - 45164 334 171 aa, chain - ## HITS:1 COG:no KEGG:SSA_0234 NR:ns ## KEGG: SSA_0234 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 171 1 171 171 86 36.0 4e-16 MSGSSKFFFILSGIVSIILGIFLLLNPVINLIAFAWLFSIIFFVSAVSSIINYFTLSSEL RSGWYLISGIINALFGIYLISGGFAFLPLVLPTTIGIWMVIDAIFIFIKSRKSDSMVSLM GRNAKWLALILLLLGLLLIFEPIAFGEAFIYFIAFGFLFDGIYSIGEAFKK >gi|292596535|gb|ADCV01000013.1| GENE 45 45654 - 47216 2225 520 aa, chain + ## HITS:1 COG:aq_2090 KEGG:ns NR:ns ## COG: aq_2090 COG0119 # Protein_GI_number: 15607049 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Aquifex aeolicus # 13 520 8 517 524 509 52.0 1e-144 MRIEKVAIMEQNRVYFFDTTLRDGEQTPGVSLQTPEKIEIAKGLVRLGIDVIEAGFPAAS PGDFDAVQTIAREVKGTTICGLARANEKDVQKVADALKDAERSRLHVFIATSEIHMKYKL KMTRQEVLDRVKSILEFAKGKFDEIEFSGEDAARTDLDFLCEVFGVAIAGGATIINVPDT VGYMNPNEFGDKIRYIKEHTPGIENAIISVHCHDDLGLANANTLAAIKAGARQVEGTING LGERAGNVAIEEVVMALKTRHDYFDDLQVNIDTKQFTKVSKLVSRLTGVVVPPNKPIVGS NAFAHESGIHQHGMMSNPETYEIMTPESVGAEKTDLVLGKHSGRHAFADHLAKLGFQSFT EEKINDLFGKFKELADRKKQVYDDDIVALVVDNLHHKKAFELVAQYYKLGEKGYAYADVR LMTPEGEKADAAVGDGPVDASLKAVERVVGLPISLKDYQIRAITAGKDALGEATLKVEYN GRLYHGRGISTDIVKSSVNAYINAVNSVFLAMELEQQEEE >gi|292596535|gb|ADCV01000013.1| GENE 46 47218 - 48477 1655 419 aa, chain + ## HITS:1 COG:CAC3173 KEGG:ns NR:ns ## COG: CAC3173 COG0065 # Protein_GI_number: 15896421 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Clostridium acetobutylicum # 3 419 5 421 422 492 60.0 1e-139 MGMTITEKNMARHAGLDVVKPGQIIECHLDAVLMNDITFPPARKEFLKIGKPVFDRHKIY LVPDHFTPNKDIQSATQAKVMRDFVREHGITNYFEVGRMGIEHVILPEKGLIGPGEMMIG ADSHTCTYGAVNAFSTGVGSTDAGVAMAEGKTWFKVPETIKVELIGKPNKWVTGKDVILD LIGQIGVDGARYMALEFAGEGVQHMTMADRLTICNMAIEAGGKCGVFPYDAITEEYIKGR VNRPVEPITPDSDAAYAQTITIDLSKLQPVVAFPHLPSNTHYINEIDKDIKIDQVIIGSC TNGRYEDLVAAAEIFKGHKVAPFVRCIVIPGSQDVYDQAMKDGLLDIFIQADCAVSTPTC GPCLGGYMGIMAEGERTVSTTNRNFRGRMGHVDSEVYLASPYVAAASAVLGRIAGPEEV >gi|292596535|gb|ADCV01000013.1| GENE 47 48479 - 48970 791 163 aa, chain + ## HITS:1 COG:PAB0892 KEGG:ns NR:ns ## COG: PAB0892 COG0066 # Protein_GI_number: 14521550 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pyrococcus abyssi # 7 162 6 161 164 194 59.0 8e-50 MDFESKKIWRYGDDVDTDVIIPARYLAIADWNELAEHAMEDIDTTFAPNVKAGEIMVAGK NFGCGSSREHAPGVIKAKGVPVIIAHSFARIFFRNAINIGLPVVEIGEQVDRIDAGDAIG VDLSKGIVYNLTKNEQYQGTELPQFIQDIAAAGGLVSFAKNRK >gi|292596535|gb|ADCV01000013.1| GENE 48 49255 - 50325 1464 356 aa, chain + ## HITS:1 COG:CAC3171 KEGG:ns NR:ns ## COG: CAC3171 COG0473 # Protein_GI_number: 15896419 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Clostridium acetobutylicum # 1 356 1 357 357 370 56.0 1e-102 MSEKRIVLIPGDGIGTEIIAAAKAVCGVAFEKAGVKVNWIDKKAGGASIDAYGVPLTEDT IEACKAADAVLLGAVGGPKWDNVDPSIRPEKAILGLRKELGLFCNLRPVKIYPSLQEYSP LKKELVQDVDFVIVRELTGGIYFGEREEAQGEGANEFAWDKETYSRYEVERIMDIAMETA RKRNKKVVSVDKANVLASSRLWRKIAQEKAAANPDIATDYLYVDNTAMQLVVNPAQFDVI VTTNLFGDILSDEGAVISGSIGLLPSASMGTGTALYEPIHGSAPDIMGKNLANPLGTILS AAMMCRHSLDLPQVADAIESAVEQVLVDGYRTGDIYREGLKRVGTTEMAQAVIERL >gi|292596535|gb|ADCV01000013.1| GENE 49 50429 - 50614 59 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MANAINKAVMVKFRYIEEFIKASLKNILPFIYQYSTLIYEEQLRIPLVSYKKERALQPPL I >gi|292596535|gb|ADCV01000013.1| GENE 50 50556 - 51095 688 179 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0098 NR:ns ## KEGG: Vpar_0098 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 179 1 179 179 275 100.0 7e-73 MNSSMYRNLTITALLMALAIMIPIVMPLKVVIPPASYTLASHVPIFLAMFLSRKMAACVV IGSTLGFFVAGFPLVIVMRAASHIIFALMGAYYIKHHPGVLTGALSFVAFNLACAIVHAI GEVLACLLFYTTTTMPNIDLIYVVFVLVGGGTIVHSLVDGYIALYIYKAIPGLSKSGNK >gi|292596535|gb|ADCV01000013.1| GENE 51 51405 - 52592 1381 395 aa, chain + ## HITS:1 COG:STM2840_1 KEGG:ns NR:ns ## COG: STM2840_1 COG0426 # Protein_GI_number: 16766146 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Salmonella typhimurium LT2 # 5 379 5 378 394 446 54.0 1e-125 MRKHIKNNVSWVGKIDWELQEFHGSDYTINNGSSQNAYLIEEEKTVLIDTVWKPHSSEFI DNLESEIDLNTIDFIVCNHGEVDHSGSLPALMEKIPNTPIYCTENAVKSLVGQYHHPEWN FKTVKTGDSVDVGNGKSLVFVEMRMLHWPDSMATYMTGDNILFSNDAFGQHFAVEELWAD KADQCRLWEEAMKYYANILNPFSPLVKAKVEEIQKLNLPIDIIATSHGAIWRENPMQIVE KYYEWSQAYQEDQVTIVYDTMWDGTKKLAHKIAEEIAKQSPETRVKIFNISKTNKNDIMT EVFKSKAIAVGSPTVGNSVLSSVAGWLDFLRELKFKNKKAAVFGTYGWSGESTKVLREEL TKYGFSVVEPEIKCNWNPEESDFNKAEALVSALLA >gi|292596535|gb|ADCV01000013.1| GENE 52 53329 - 55059 2619 576 aa, chain + ## HITS:1 COG:FN0471 KEGG:ns NR:ns ## COG: FN0471 COG5295 # Protein_GI_number: 19703806 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 128 441 28 307 340 113 33.0 8e-25 MREMKHSKKLAFAVLAAVTAVGANVNPVDAASVVMDNTNVVTGTNNAVAYGSGNTVKESA ANFRDRDYENEPDDATKKTGDWKSNSVAIGVNNTAAGTSALAMGNSSKALMNESIAIGHS AEAQRTWSTAIGTRAKASEVRSQAIGYEALASGYKSNAIGSSAQATNNHSVAMGSSALAS GDHAQAFGAGAQATNVRSNAFGSDASATADYAMAIGDHANATHLNSIALGTGSTTSEATA QSSATIAGHTFGGFAGVGSAANGSVSVGKAGAERQIKNVAAGEISATSTDAVNGSQLYSV ANDLQTQINNSTPGQINNNIKNLTNRVGTVERRVNKVGAGSAALAALHPLDFNPDDKWTI AAGYGHYHNANSAALGAFYRPNEDTMFSVGGTVGTGETQLNAGVSIRLGKRSPESRSRVA MGREIAELNARLQDMENKYNNLLQILTPHAIDPSKTAEFPDVPRNHWAYQYISQLAGNGI LVGYPDGTFKGDVKMTRYEFATMLYRALQNGAPIDDNMKRALNEFGPELQNIRLNHFRVD RISGDDNDRHKTERVRVNNEPKNERDVYGSRIYNNQ >gi|292596535|gb|ADCV01000013.1| GENE 53 55559 - 60517 5109 1652 aa, chain + ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 68 1266 857 2277 2712 210 28.0 2e-53 MNRIYKVIWSRVKKCYVVVSEFANNRGKISGSGGTSACTVLCALALVGSIALPLNTVHAV IPEGTGSGISLGNGTETGSDPNNVAIGGYAKSLGAVALAIGAHSNSSAQYSTALGGGSNA TAQNATAIGGVAYASAKNAVAVGANAKASGEYAAAIGGDAKADKTHAIAIGSVAHAQEES SLAMGSLAKATNTYAYAIGGNAQAKGRWSIAMGTNAVAEDDASVAIGTWSNATSGQSAAV GYQAKAKALGATALGRLTNVTAVDGTAIGSSTSVTGLNGTSIGNKANVTVKNGVAIGNEA NAKNENAVAIGSGSETATAVGTTSETVNGEIHNFAGINPTSTVSVGKTGVERTITNVAAG RLSATSTDAINGSQLYAVNTEVNKGVVYAGDVKAAGATDNKFIQRLGAQTNVVGGVTDVS KLSDNNIGVVSDGINTLNVKLAKELNNLTSVTTGNTVMNTDGVTITGGPKIVKDGINAGN KQITGVASGGDVITNGANIGDINRIVDAKDKYVTGGTATYQANGDGIANLTGTNGLTANV TGLKNNFVTSGSVSNDGKTLTLERNDTGKVNVDLSNVFTEVGKGDYRLVANPDLNSQGKY KVDSDGNMVLTVANDKGDKKQVTLTDIASKVQQDTNTTNITNINTTIAKGLNFAGDTGTD INKQLGDKLSIKGGASADLTDNNIGVESDGTQLNVKLKKDINLGPDGSLAINGKTYVNKD GLNAGGQKITNVAAGTAGTDAVNVDQLNAAIGGTAKATTVKAKDANVTVTEGVNAAGGKE YTVGLGDKITLGSDADKQVVIDGTTGTITAGNKVTIHGTTGDIKAGIVKITGAGTVNELT NRIWDIDNPTVVHGQAATEDQLKYVSDGVKNNKNDITNINKTIVKGLNFKGDDTTVINKQ LGEQLDIKGGADTNKLSDDNIGVVSANGALNVKLAKELKNLTSVTTGDTVMNTDGLTING GPKILKNGIDAGNKKITNVAAGTDNTDAVNVGQLKDAIAAGKTILKDGKNTTVEGDGSAA NPYKVNVNDDLVLGKKGIDGKDGSIGVNGKDGSAVVINGKDGSIGLNGKDGNNAISIKGG DGKSGIDGKNITRLVIEEKNGDKHDVATLDDGMKYGGDTGAVIKKKLNEQVNVVGGITDV SKLTTDDNIGVISDGDSNLKVRLAKDLKGLNSVTTGDTVMNTDGLTINGGPKIVKTGIDA GGKKITNVADGTDVTDAVNVSQLSKAVAGATTKLENGKNTTVTSITNNDGSKTYKVNLND DITLGTDPNKQISIKGSEGTIQAGKVTVNGTAGTVNNLTNKTWDPANITSGQAATEDQLK AVANGAGKYSSVSEGNNISVIKGTNAIGGVDYKVSVIDTPTFKSVTTGNTIMNNNGLTIK NGPSITETGINAGNKKITNVAAGTSDSDAVNVSQLKEIGGNIKNIDSRMNRVGAGAAALA ALHPLDFDPDDKWDIAAGYGNYKDAHAASIGAFYRPNEDTLFSVGGSFGGGENMLNAGVS MKIGQGNHVSTSRVAMAKEIKDLRAELENVKGILMKVSEGKQLNSLDLDKMQLFPDIPEN HWAYDYVATLAGNGIIVGYPDGKFGGDRMMTRYEMAALIYRAIQNGAVADDQMVRALKEF QPELERIRVDTISKHKDGTPDIQRVRVIKGRG >gi|292596535|gb|ADCV01000013.1| GENE 54 61036 - 61521 559 161 aa, chain + ## HITS:1 COG:BS_ytmI KEGG:ns NR:ns ## COG: BS_ytmI COG0454 # Protein_GI_number: 16079991 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus subtilis # 4 141 6 145 178 88 35.0 7e-18 MKEFRQLTVADTAEYHKVLIDGYAAIKDYPISFDAIDFTEEESKEWIENYPVYGLYIDGQ LVSSITFCMPWVKYSTPDKYPHIAHFVTAPAFKGKGYAREVLGYAEELLKEQFKTHIVTL GTAKEHPWLPKMYESFGFTAYDKVHFRGKQHTTILFKKELN >gi|292596535|gb|ADCV01000013.1| GENE 55 61730 - 62479 1088 249 aa, chain + ## HITS:1 COG:Cj0552 KEGG:ns NR:ns ## COG: Cj0552 COG3819 # Protein_GI_number: 15791913 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 2 217 4 221 230 159 38.0 6e-39 MLILSGILVMVIGLMLRFNALLVVVAAGFVTGLAGGLSINNIVGAIGEAFVKNRYMSLFI LILPVIGLMERHGLRERAEILIGKINAATAGRIFMIYLFVRQVTVAFGINMSGMVAMVRP LIAPMSEAAVAQGRPVSQRTLDKVRGVAASADNIGNFFGQNLFLAAGGLLLIKGVMEQLG YSVELTDMVLYGLPTAVCAYIVNFIRFIIFDKTIQASVARDEADMKAGKLVPNELNILVT PEELKKEAE >gi|292596535|gb|ADCV01000013.1| GENE 56 62481 - 63410 1046 309 aa, chain + ## HITS:1 COG:RSc2167 KEGG:ns NR:ns ## COG: RSc2167 COG3817 # Protein_GI_number: 17546886 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 11 309 5 316 318 218 41.0 8e-57 MLEIFYKMQPLDYVYLLVGIILFIFAIQSFLDKEHKYRIGTGLFWLLYSISFIFGSYLSK EINGWLVIAMAAIVLVKQLGKGHYFESPIEFKKGEAVRIGNVIFVPALLVGIITFFIGFF TKLGALVGLGIAAIIAMCAALYITKGELNQGFHEGRRLIDAISWTAILSQLLAALGYLFN LAGVGKLISSAVASVVPADNVFLVVVAYCIGMVIFTMIMGNAFAAFAMITSAIGIPMLVV AHGANPAAVGAIAMLAGYCGTLMTPMAANFNIVPVALLEMRDQYGVIKAQLPIALIMLVL NILLMYYFI >gi|292596535|gb|ADCV01000013.1| GENE 57 63524 - 64177 905 217 aa, chain + ## HITS:1 COG:YPO2703 KEGG:ns NR:ns ## COG: YPO2703 COG2039 # Protein_GI_number: 16122907 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Yersinia pestis # 1 198 1 199 215 222 51.0 5e-58 MKTILITGFDPFGGEPINPAWEAVKTMDGYTDGDYKVVTQMVPTIRYKSVDTVKAAAEEC QPDFILCVGQAGGRPDITVERVAINCDDFRIPDNGGNQPEDEPVVADGPSAYFATLPIKN IVNALHQNGIPAKVSNTAGTFVCNHLMYGVCHYAAQKGNIKAGFMHIPYLPSQVVDKPNQ PSMAVETVRATLETIVHVLAHGESYKAQDINYTTPHE >gi|292596535|gb|ADCV01000013.1| GENE 58 64442 - 65557 1650 371 aa, chain + ## HITS:1 COG:Cgl1235 KEGG:ns NR:ns ## COG: Cgl1235 COG0435 # Protein_GI_number: 19552485 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted glutathione S-transferase # Organism: Corynebacterium glutamicum # 60 370 21 331 359 223 40.0 6e-58 MSEHVDVSKIKDPTIAAARKEVEFQRAMNPCPIDFSEFQSSNPRSQGEQKEYEGKDASNF NRRQKYSDSEEPQFTTPFGSEPGFLPVEKDRYRLVWSKHCPWAHRIAIAIDLLGLDKVIS KGTVDPLRPAGVIADWFFTLDKDEKDPVLGIHSLGEAYRKGDPNYDARSTVPAIVDVTTG AVVNNDYHALTTELALGFKDFVSPDAPDIYPEELRADIDALNVIIYADFNLAVNLAALVT NQKDYEYYYDRIFARLDWLEERLSKQRYLMGDTITDPDIRIFPTLARFDLVFYQKYLVNK KRLVDYPNLWNYAKDLYSNPAFGGTTDFDSMRKRFYYVDHTPFEDLPRLVPKGPDDSIWL EPNDRAEKFGK >gi|292596535|gb|ADCV01000013.1| GENE 59 65589 - 66992 669 467 aa, chain + ## HITS:1 COG:BS_yxeQ KEGG:ns NR:ns ## COG: BS_yxeQ COG2079 # Protein_GI_number: 16080997 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in propionate catabolism # Organism: Bacillus subtilis # 22 456 24 441 445 235 34.0 2e-61 MDLVTQTIVNHIEQTDVTNREDLLSVARIAFLDYLASLAPAETEQAVQDLARFIETNGEN VSKADKALYYGFASHYLDFDDAQANLAGHFSTVLYSALLAVLEPYDTWHDFLRAYIIGAE LEGIIGSLINPAHRTQGWHSTGTVGVIGAAAAIGALRGLHGESLAQLLSLAATQSAGMFF QSGTDGKPLHAGLAARNGVWAYELLQHTSLKTSTKPFDPERGWFKIIGKTTVTSNDIASR WLAPGQLIDPGLWMKVHPYCSAAICGAEAAEVVAHRLYTSSSYVSKHNYLSPDTEEQDQC RLCTTPNFSLWDEIDRVTVHFPPGADAALRYTSPTTGREGQFSIEYIVYQVLAYGAVQDE LFKIDIIDSSIRDYMSRIERVYDLPKVSQTERITKVTVILKNGDTFTETVNNPKGSPNNP LTMEDIRIKLGLTLKADQIDRIIEAFTHTDEVEPFLQTLRKEGVLHV >gi|292596535|gb|ADCV01000013.1| GENE 60 66985 - 67824 1221 279 aa, chain + ## HITS:1 COG:BS_ytmK KEGG:ns NR:ns ## COG: BS_ytmK COG0834 # Protein_GI_number: 16079989 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Bacillus subtilis # 20 273 15 266 270 139 31.0 4e-33 MFNTKKLTKLFAIGALALGVLVVAGCGDDTSKDAKVNPDAKVINVATRGTVRPYSYTDDN GNLTGFDVELLKEIERRNPDLHFNFKPMAVDAAFVAMDAGQVDMIANQMRRNPTREAKFY YTNEVNNYSTRKLVVKNDRNDISKLDDLKGKKIAVTTSSEFNELVKQFNETANPQIEVIY TDKAGAETLNLVATGRADAAGEYEYVINSAIKDRGLPLKAVGDVLAVVPTYFLSKRTDDM KQVNEKIDKTMKEMRADGTLKKLSEQYLGGDYTFDPTQK >gi|292596535|gb|ADCV01000013.1| GENE 61 67880 - 68596 874 238 aa, chain + ## HITS:1 COG:SPy1658 KEGG:ns NR:ns ## COG: SPy1658 COG0765 # Protein_GI_number: 15675528 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 2 232 23 259 267 163 37.0 3e-40 MGKYFDVSYMIQAFPQLLNYVHVTVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVF ISFMRGTPFLVQLFLIYFGVPEIMSHMGLNMKNVPGLVFVYAVFTLHIAAYSAEIMRSSI DAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVGVVDM MRKADLMGGNSQRYLELFVDAAIIYGILIIIVSLLGRLLEKRFTVAGKETQRILISEE >gi|292596535|gb|ADCV01000013.1| GENE 62 68603 - 69319 674 238 aa, chain + ## HITS:1 COG:BS_yxeN KEGG:ns NR:ns ## COG: BS_yxeN COG0765 # Protein_GI_number: 16081000 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Bacillus subtilis # 5 234 4 223 224 155 40.0 8e-38 MGHIIDSTYIYGTFFAVIPYVKVTLMITFLSVGLGTILGLLSCVLQQNKVPVLSQLSYLY VLLCRSIPNMVLLYLVYYGLPILFLALEDQTGVHVPFEKVPATFVAVVGLTLHTGAYLSE IFRAALQSVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMKSTSIVFV ITVIELFGAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLEIYASKYKRGNAL >gi|292596535|gb|ADCV01000013.1| GENE 63 69316 - 70089 669 257 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 242 1 241 245 262 52 1e-68 MIDIKQVHKSFGNREILKGIDLHVPTGSVTVILGPSGSGKTTFLRTLNFLEKADAGTMQL NDISVDLHKASNKEILNARRNTSMVFQSYNLFSNKTVIENIMEGLVTVKKMKKSQAREIA QRFLKEVGMEGYDDYYPVQLSGGQQQRIGIARALAMDPEVILFDEPTSALDPELVGEVLA VIRKIAKELKVTMIIVTHEIGFAKEVADQVVFMEGGVIVEQGDPKVVLEHPTEERTRKFL SRYLTLDSEQPLDSAAL >gi|292596535|gb|ADCV01000013.1| GENE 64 70219 - 70701 552 160 aa, chain + ## HITS:1 COG:lin2444 KEGG:ns NR:ns ## COG: lin2444 COG0454 # Protein_GI_number: 16801506 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 4 160 6 162 178 89 35.0 4e-18 MKEFRQLTVDDAAEYHEVLIAGYAENKNYPISFDAINFSPEESRVWILKYPVFGLYVDGS LVCSISFRMPWIPKATPDVYPHIAHFVTAPEHKGQGYAREVLAEAEDLLRNVYKTPAVTL GTAAEHPWLAKMYEGFGFKEYKRTQLPGKVHTTIFFKKIL >gi|292596535|gb|ADCV01000013.1| GENE 65 70901 - 71299 507 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794724|ref|ZP_06759859.1| ## NR: gi|294794724|ref|ZP_06759859.1| hypothetical protein HMPREF0873_01334 [Veillonella sp. 3_1_44] # 1 132 4 135 135 266 100.0 3e-70 MYEIVNEPNLTIAFDMDVELSEFGMFGVYIKRGYNICSGYIDPSDWSGIRKGYQELVDLY EKCKGKATFTHVLTGEGDTLTFSLDQKGALAIDVTICTTYNYKCNMTIESLDQTYLPKFI EFFKEFLEREPK >gi|292596535|gb|ADCV01000013.1| GENE 66 71354 - 72256 1462 300 aa, chain - ## HITS:1 COG:BS_rbsB KEGG:ns NR:ns ## COG: BS_rbsB COG1879 # Protein_GI_number: 16080649 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 27 300 31 304 305 310 61.0 3e-84 MKKLLLLLTMAIMVIGLVAGCGKSADNGGDKKSGTIGFSVSTLNNPFFVTMKEGVEAQAK ALGLKVKIVDAQNDPAKQANDISDLLESGVSVLIINPVDSAAISTSVEAANAKNIPVITV DRSADKGKVVAHIASDNVKGGEMAAQLIAEKVGKAAKVAEIEGIPGASATRERGQGFHNV ADKDLTVVAKQSADFDRTKGLNVATNILQANPDVQAIFAHNDEMALGAIQAAKSAGKTIF IVGFDGTADADKAVKDGTLAATIAQQPDQMGKIAIDTAQKVIKGEAVEAKIPVDLKVVTK >gi|292596535|gb|ADCV01000013.1| GENE 67 72266 - 73201 1417 311 aa, chain - ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 9 311 19 321 322 344 68.0 1e-94 MDSKALQYVKKLGPLIGLILLFVIISVMNDSFLEFSNLRNLLRQVSINAIIAFGMTFVIL TGGIDLSVGSILALSSAVMANLIVTGTDPVLAIVLAAGAGLVLGGINGLVITYGRVAPFI ATLATMTIYRGATLVFTDGNPISGLTQDPLFHGFGQGDIAGLPVPAITMFLAFIALWFVL SRTSLGRKTYAVGGSEKVSYIAGIKIDRVKIFVYALTGMLCGIAGAIITSRLNSAQPTAG AGYELDAIAAVVLGGTSLAGGRGHIVGTLIGALIIGTLNNGLNILDVSSFYQQVVKGIVI LLAVLADRKKA >gi|292596535|gb|ADCV01000013.1| GENE 68 73201 - 74682 189 493 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 235 489 12 260 329 77 25 6e-13 MEIVMSGIAKAFGTNQVLRDVSITLKEGEVHALMGENGAGKSTLMNILTGIHKADAGTIT IDGVKRTFPNPREAELNGVVFIHQELNIWPNLTLLENLYLMRPKRNKFGMLDKKAMLTEA ENTCRELGIELPLTTEAGLCSVGHQQMTEILRILMLDAKVVIMDEPTAALTERETATLFN MMRKMKARGVAIVYISHRMEEVFSECDTITVMRDGHTIITKPTSEISVDEVVRHMVGRSI DEFYPARTTTPGDVVMNVDNLKPEGFDNDISFSLRKGEILGVAGLMGAGRTEIMRAIFGV DKHNGGTVTVNGSVLNCKKPEDAIKAGIAFITENRKSEGLILDFSIGSNITLPNLGEICP SHVLDKGKLNSFADELSKKLGVKTQSIHEPASSLSGGNQQKVVIAKWVGKKPSIIIMDEP TRGIDIGAKRDIYDLMNELTNDGVSIIMVSSELPEVLGMSDRVMVIHEGRVAGILDRSDA TPESIMTLATGGQ >gi|292596535|gb|ADCV01000013.1| GENE 69 74836 - 75249 526 137 aa, chain - ## HITS:1 COG:BS_rbsD KEGG:ns NR:ns ## COG: BS_rbsD COG1869 # Protein_GI_number: 16080646 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Bacillus subtilis # 1 133 1 131 131 142 51.0 3e-34 MQRHGILNSHIAKVLADLGHTDTICISDCGLPVPEGVQKIDLALDFGVPSFEQVVSIIAK HMKSEAIHVATEIKENNPKAYAFLESTFPSDQYEWIETSHDAFKEATKQCKCIIRTGETS PYANIILRADCIFSDRP >gi|292596535|gb|ADCV01000013.1| GENE 70 75379 - 76269 1052 296 aa, chain - ## HITS:1 COG:BS_rbsK KEGG:ns NR:ns ## COG: BS_rbsK COG0524 # Protein_GI_number: 16080645 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Bacillus subtilis # 1 293 1 293 293 293 51.0 3e-79 MNRIVVIGSCNMDIVVLANKRPTAGETIMGNELHIAHGGKGANQAVAAAHLGAEVTMVGC IGEDAYGHMIIDNLKENFINTDYIVTVPNTTTGTAHITLAEGDNSIIVIAGANAKVDQSV VDNAWSAIEQADLVMVQNEIPIPTIEYIVRRCHEANVKVLLNPAPAADLDSEWLELATYI TPNEHELSALYPNQSTEEILLANENKIIVTLGSKGVGYADNGEIHIVPGFKVEPVDTTGA GDTFNGAFATAIVNGKSLADALHYGNAAAALSIQRLGAQGGMPTKDEVAAFLAEHV >gi|292596535|gb|ADCV01000013.1| GENE 71 76610 - 76936 203 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|282849413|ref|ZP_06258798.1| ## NR: gi|282849413|ref|ZP_06258798.1| plasmid stabilization system protein, RelE/ParE family [Veillonella parvula ATCC 17745] # 1 108 1 108 108 186 100.0 4e-46 MKSQPYTIIPTEKFNKELHQQILYIAMQFSKETAIQVKENIQNSISNLMNHPYMGTTPKI RALNDSDFRMLILEKLIIFYTVVEEARTIYLISILDQRQDYVNILNGL >gi|292596535|gb|ADCV01000013.1| GENE 72 76941 - 77222 386 93 aa, chain - ## HITS:1 COG:no KEGG:Dhaf_1690 NR:ns ## KEGG: Dhaf_1690 # Name: not_defined # Def: prevent-host-death family protein # Organism: D.hafniense_DCB-2 # Pathway: not_defined # 4 89 1 86 92 81 48.0 1e-14 MGILRETIRPSSDLRNKYPEISKTLQLKDEAAIITVNGRGDTVSLGYNTYNMLKSKIELL SSLVEGQNDIIQGRTTTLDEAFNSIDKMLDQMG >gi|292596535|gb|ADCV01000013.1| GENE 73 77460 - 78116 904 218 aa, chain - ## HITS:1 COG:XF1747 KEGG:ns NR:ns ## COG: XF1747 COG0702 # Protein_GI_number: 15838348 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Xylella fastidiosa 9a5c # 3 216 2 210 213 93 29.0 3e-19 MYKYITILGAAGQIAQKLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN PGKLEQAVTNAEVVFVGAMESGSDMASIVKALSRKNIRRVIGVSMAGLSGEFPVALEKWT FDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEKTDYELIPEGAQFNDAQVSRE AVVKAIFDILHAADETPFHRTSIGVGEPGTHYDKPSFH >gi|292596535|gb|ADCV01000013.1| GENE 74 78225 - 78746 382 173 aa, chain - ## HITS:1 COG:CAC3465 KEGG:ns NR:ns ## COG: CAC3465 COG1335 # Protein_GI_number: 15896704 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Clostridium acetobutylicum # 5 171 6 173 178 144 45.0 1e-34 MAQALIVIDIQEGLVKENPYNAKNFISNTKAIIQHFRDQNIEVIYIRHSENEGLLATGSD NWQIYHELKPQENEKIFNKYYNSIFKDTELKEYLNRKNITDVTFVGMQVEFCIDTSVKVG FEYGYNITIVEDAISTFDNEYLPAGTILSFYKEKIWRNRFAQLKTTNEMLSIN >gi|292596535|gb|ADCV01000013.1| GENE 75 79030 - 79275 233 81 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0113 NR:ns ## KEGG: Vpar_0113 # Name: not_defined # Def: prevent-host-death family protein # Organism: V.parvula # Pathway: not_defined # 1 81 1 81 81 149 97.0 3e-35 MPNIKPISDLRNYSEVLRDVTIDSPVFLTKNGRGRYAIMDIQDYERLMATIKLMGALETG RKSGEEQGWISSEQLKSELGI >gi|292596535|gb|ADCV01000013.1| GENE 76 79278 - 79598 170 106 aa, chain + ## HITS:1 COG:no KEGG:TherJR_0533 NR:ns ## KEGG: TherJR_0533 # Name: not_defined # Def: addiction module toxin, RelE/StbE family # Organism: Thermincola_JR # Pathway: not_defined # 8 104 7 103 110 72 39.0 4e-12 MNNQISYAPKAREDLLEIKSFIEEETGDIELAKKTVLDIVTANDSLSIFPEMGQRLLINL GSKIEYRYLLCHNYLSFYRYLDRTIYIDRILNSRRNYLRILLDEVH >gi|292596535|gb|ADCV01000013.1| GENE 77 79739 - 81364 1933 541 aa, chain + ## HITS:1 COG:MA1747 KEGG:ns NR:ns ## COG: MA1747 COG1122 # Protein_GI_number: 20090599 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 210 497 10 294 614 185 36.0 2e-46 MERIQDLVYTHVQGGQFRWVTVSTLMLALGTILHLVSPSVAGVTPNWTIATYCVAILLTR PSLSQTLGIGLVAALINVLTSKSAFPYGNLLSEPGGALTAALVTRAMLSMKFRKIGGFDL TPVVSGFLATVVSGGIFVTILWQVLGLPNNVYMYGMWPLVLIVGALNGAITPILYIPAQR LFSKRGMLPNADQLTSDHSRLTILPERQAKISIEHVNYYHPKATTPSLENINLDVNEGDF LVVTGPAGCGKSTLCMAMVGAVPKFYGGRLEGMVFVDGHATTQMEIPELANHIGVVLADY DTQLVTMTVREEVAFAMENRGYDRETIKARSEEVFKQVGLVGLENRKITSLSGGQRQRLA IASVLATNPTVLVLDEPTSSLDPDGTAELYRLVGDLNQKHGITVVVIDHDLHAVLPYANR MALMVDGSIACDDDVPTTLRYMYEHNIHVDALPSVFTTYMELEQAGFHSDEPWLSIESAI KGLHQIEMAHAIQTEVHGKSNSPANQRITVDNLVDQSNIVENRQPVQRVDDVPGKDGGAH A >gi|292596535|gb|ADCV01000013.1| GENE 78 81357 - 82169 271 270 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 228 1 232 245 108 30 2e-22 MLKVENIRFGYVPSVDIFRNVTFTIEGGEYIAIGGRNGCGKTTITRLLVGLEKAREGHMY YNGRDITSMPPSKRGQFIGYVFQQPDRQMFRPTVATEVAFGPESLGRSKAEVKRIVDEVL ARTGIGHLREAYPPTLRRGEKQRVAIASALAMQSKILILDEPTSGQDGKETKELLALLRQ LNSEGITILLITHDMEIMASECSRAIIMGNQTVAFDGSPEELFKKSTDELQDLGLTKPPS VELSLAVPSLGYCKSMDELKSKLVAQLSGK >gi|292596535|gb|ADCV01000013.1| GENE 79 82179 - 82847 740 222 aa, chain + ## HITS:1 COG:PH0131 KEGG:ns NR:ns ## COG: PH0131 COG0619 # Protein_GI_number: 14590075 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Pyrococcus horikoshii # 1 221 13 240 249 71 26.0 1e-12 MERLVPLTKILMTLAVSVWAILLRDWASLLALVVVELGVLFLAGLLFKQRKAVLALTSFA VFLGLIQFLGSGDVTSAIVSGLRMLAMTLVFIGLLATTKLQDLTAALVTQCKIPYEYAFM FTAALRFVPDFIAESHAVQEAQACRGLSLEGNFIKRIKSYASVIQPLLLKSLGRSETMAL SLELRGFGGPTHSFAASVGLKRIDYTVVSALIVITILLFVIV >gi|292596535|gb|ADCV01000013.1| GENE 80 83202 - 83702 423 166 aa, chain + ## HITS:1 COG:PA4866 KEGG:ns NR:ns ## COG: PA4866 COG1247 # Protein_GI_number: 15600059 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Pseudomonas aeruginosa # 6 158 5 157 172 105 38.0 3e-23 MSELVIRPITKGDIAPCLDIYNYEVVNGVATLDLEPHTLSEWQEWHESHSDEHHPIVVGT IDGIVAGYASLSPYRPKEAYKSTVELSIYIHQDYRGRGIATQLMAHILEIAKNDPLLHNV VSVITAGNEGSTKLHARFGFTYCGLTPQVGFKHGKYQDTETYALLV >gi|292596535|gb|ADCV01000013.1| GENE 81 83803 - 84666 852 287 aa, chain + ## HITS:1 COG:lin0579 KEGG:ns NR:ns ## COG: lin0579 COG1387 # Protein_GI_number: 16799654 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Listeria innocua # 21 282 4 265 275 213 40.0 3e-55 MNMKDERQFVGYSKYRSRLVDGHVHTELCPHGSGDRTAMMIEKAIELRIEKVCLTEHAPL PTAFAAEYGGDKKAYDTASLKLNEVDTYLELGRQLQRAYGTHIDISLGFEVDYIPGFESD IQEFLDRYGPLTDDNILSVHFMEGVNNAFYCLDYSAEEFEKGFGPWIEKQYELYYKYYST VRQAVRADLGEYTPKRIGHFDLIKKYQHHFGFERHLDRRNAQVVSDILHIMRVQGRELDY NMSGFFKPDCREMYPSRFIQGMAAIIGVPFVLGSDAHSVADIENVWG >gi|292596535|gb|ADCV01000013.1| GENE 82 84910 - 86514 1671 534 aa, chain + ## HITS:1 COG:lin0577 KEGG:ns NR:ns ## COG: lin0577 COG0040 # Protein_GI_number: 16799652 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Listeria innocua # 331 533 4 209 213 226 55.0 6e-59 MVQQQLPTGFRDDIGIVAERKDDVSQYVLGLCRNRQYTKISTPLVEYKDVFNGYAMGRGQ HMYEFMDSSEVSVVIRPDLTMPIGRFLATTNIELPRTFYYLGDVFMKNKKHRGDVNQVTQ GGIEMVGYEGLEAEQECFKIIKEVNEAQLGNHLLLEIGDARFSRAITDALGLSDDEKAEL LEALFTKYLPRYNELISDFKNSALYPFLTVWPRLFGTVQDIKDELNQIILPAAAQRILDN LVDMANQVEATGQRVRIDVSTEPLQSYYTGLTFRGYVDGVSQYIVSGGRYDGLLSSFDGT PMPAVGMAFNIDVLTDVTLQGESKAQDNDTLRIALTKGRVEKDFIPLLEACGVDCEPLHN KARKLIISLGDSMEIILAKGPDVTTYLKNGVVDLGIVGSDVLDEQDDTSYEMLDLQTGKC QFILASLAGYDPKEGRRQRIGTKYPTITKQYFGAQDVEIIKIEGSVELAPLVGLADAIVD ITETGTTLRENNLEIFDWLQPISTRLVANPLALKQKRNTIFKLIDQLSEAINKN >gi|292596535|gb|ADCV01000013.1| GENE 83 86587 - 87864 1403 425 aa, chain + ## HITS:1 COG:lin0576 KEGG:ns NR:ns ## COG: lin0576 COG0141 # Protein_GI_number: 16799651 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Listeria innocua # 1 425 1 425 427 468 56.0 1e-132 MKIYKESLEAMLAIVRNYTQQTTDMEIERRVYDIIADVRTNGDAALKSYSEKFDGVSIED FKVPQEEIDAAYESLSDDLKAALLKAKANITEFHSREIEQGFVDMDTPGIIRGQKVIPLA RVGLYVPGGTAAYPSTIIMTALPAKIAGVKEIIMVTPPQKDGINPAVLGAAKLAGVDAVY QVGGAQGVAALAYGTETIPKVDKIVGPGNIYVATAKRQVFGQVDIDMIAGPSEIGVIADD SANPVHLAADLLSQAEHDPRARAIMVTTSESLANAVSDEVERQLKLLPRESIARPAIENN SYIAIMDSIEDMFTVMNEVAPEHLEIQLPDPMNYMSLVQNAGSVFLGAYASEPLGDYVGG TNHVLPTSGTARFSSPLGVYDFVKRTSFTQFTKERLEEVAKHITTLARTEGLEAHARAIE VRFEK >gi|292596535|gb|ADCV01000013.1| GENE 84 87987 - 88577 535 196 aa, chain + ## HITS:1 COG:lin0575 KEGG:ns NR:ns ## COG: lin0575 COG0131 # Protein_GI_number: 16799650 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Listeria innocua # 2 196 1 194 194 244 62.0 1e-64 MIRTGTVQRTTQETDITVEITLDGAQTSSISTGIGFFDHMLTLLAKHGRFSLVVEAKGDT YVDAHHTVEDVGLALGQALVKALGDKAGIERYGDAWVPMDEALTQVVIDLSGRPYLVFQG EWSTPVLGGNFETELVEDFFQALAMSAAMNLHVRNLYGRNTHHIIESMFKATGRALRKAV TINPDIQGVNSTKGVI >gi|292596535|gb|ADCV01000013.1| GENE 85 88591 - 89313 943 240 aa, chain + ## HITS:1 COG:lin0573 KEGG:ns NR:ns ## COG: lin0573 COG0106 # Protein_GI_number: 16799648 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Listeria innocua # 2 238 3 237 240 195 43.0 5e-50 MIFPAIDLQEGRSVRLYKGDFAQETVINPDPVDQAKQYEAAKVGALHLVDLDGAKAGKPV NVDIVKAVRAAFTGILEIGGGIRDKEAVDLYLSLGVDRVILGSVALKNPELTKQVIAEYG AERIVIGVDGKNGKVAAEGWLDQSDVPMTDLIGAMVEGGAKYFIVTDVDRDGTMQGANEE LLGNLQNEFPTARIVASGGVRNLADIKSLEQKGVMDSIVGKALYEGTITLEEIAEYNQQK >gi|292596535|gb|ADCV01000013.1| GENE 86 89398 - 90156 1006 252 aa, chain + ## HITS:1 COG:aq_181 KEGG:ns NR:ns ## COG: aq_181 COG0107 # Protein_GI_number: 15605750 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Aquifex aeolicus # 1 252 1 250 253 299 59.0 4e-81 MLAKRIIPCLDVDDGRVKKGVNFVNLVDVGSPVDIAASYEQQQADELVFLDITATVDART TMRDVVQEISTQVFMPLTVGGGIKSVDDMTALLKAGADKISLNSAALANPELITEGAQKF GNQCMVVAIDVKTDEETGEWYAYTHGGRKRTEWKALDWAKEAVDRGAGELLVTSMGKDGT KSGFDIELYKALESVVNVPIIASGGAGKVEDFVDLFKQTSVTGALAASIFHFGEVKIPEL KQELRAHGITVR >gi|292596535|gb|ADCV01000013.1| GENE 87 90362 - 90679 304 105 aa, chain + ## HITS:1 COG:BH3577_1 KEGG:ns NR:ns ## COG: BH3577_1 COG0139 # Protein_GI_number: 15616139 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Bacillus halodurans # 10 102 12 104 117 136 64.0 1e-32 MKPDFEKGNGLLPTVVQDAETKDVLMVAWMNEESFHKTLETRETWFWSRSREELWHKGGT SGNVQHVVSMALDCDGDTLLIQVKPEGPACHTGRTSCFFNEVERS >gi|292596535|gb|ADCV01000013.1| GENE 88 90682 - 91008 467 108 aa, chain + ## HITS:1 COG:lin0570 KEGG:ns NR:ns ## COG: lin0570 COG0140 # Protein_GI_number: 16799645 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Listeria innocua # 6 108 2 103 103 115 71.0 3e-26 MAQQTLNELYEIIKNRKVQPKEGSYTNYLFDKGLDKILKKVGEEATEVVIAAKNEDPQEL IYETADVLYHLLVLLVEKNIPYEAIEAELASREGVVSKTTDRPEITNL >gi|292596535|gb|ADCV01000013.1| GENE 89 91098 - 92174 1006 358 aa, chain + ## HITS:1 COG:BH1665 KEGG:ns NR:ns ## COG: BH1665 COG0079 # Protein_GI_number: 15614228 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Bacillus halodurans # 1 357 3 359 369 267 39.0 3e-71 MKEIIRTLKPYIPEESAEAVKERLGVERLVRLSANENPYGTSPLVREAILSYVTHNDANY YPDGNATDLRMKLANYWQVQPEQLVIGVGLDEVIAMVNKTLITAGDSIVVSVPAFSEYAL NGLVEGAEIREVPADFETGQYDFSALVKAVDETTRVVWICNPNNPTGTYESVENIRKFVA AIPKETLVIIDEAYIDFVTSVAVPTARALLDEFPNVAIMRTFSKAYGLANYRVGYMMTPI ELANYMQTIRLPYNLNTLSQVAAEAAFGDQEFVARTVSQNAEERSKWEILFDELGIHYYK SEANFIFFAAPDAEGLADAWLKSGYQVRRGQREGWLRLTIPMPQDGDVMRKILRDFMN >gi|292596535|gb|ADCV01000013.1| GENE 90 92253 - 92879 535 208 aa, chain + ## HITS:1 COG:lin0574 KEGG:ns NR:ns ## COG: lin0574 COG0118 # Protein_GI_number: 16799649 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Listeria innocua # 1 208 1 208 208 204 46.0 9e-53 MIAIIDYDAGNTFNVQKALAYIGIDAVLTADSATILNADSVLLPGVGAYAPAMAVLKERG LVDVIYEVVKREIPLLGICLGMQLLFEESEEYGPTPGLGLIPGKVKEIPRNLGLSVPHMG WNKNVVHQPHSAFSNVDDQYTYFVHSYYVDTDPEYIISTANYGIDVPGIVERGRVYGMQF HPEKSGVVGLNLLRTFGTITKTYRKAGE >gi|292596535|gb|ADCV01000013.1| GENE 91 93161 - 94993 2397 610 aa, chain + ## HITS:1 COG:CAC1669 KEGG:ns NR:ns ## COG: CAC1669 COG1966 # Protein_GI_number: 15894946 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Clostridium acetobutylicum # 3 582 1 579 592 607 56.0 1e-173 MVMNGIYLVIASACILILAYRFYGAFIAAKVLTLDQYRPTPAMVHNDGHDYVPTNKWVTF GHHFAAIAGAGPLVGPVIAAQFGYLPGALWILIGSVLAGAVHDMVILFASVRYDGKSIAD IAREEISKLAGFGAMLATLFLLIITLAGMAVVVANALHNSPWGFFSVFATIPIAIFIGIY LKWLRPGKIQEATIIGVALIFAAIIYGPNVAASEYASWFTYDLQTIEIMLAVYGFFAAAL PVWLLLAPRDYLSTYLKIGTIGALALGIIIVMPEIQMPAVTPYIWGGGPVLKGSVFPYIF ITIACGALSGFHTVIATGTTPKMLTNEKEILPIGYGAMLTEGFIAMMALIAATALHPDDY FAINSTVESFKALGLQVHELPALSAMVGEDLMHRPGGAVSLAVGMAHIFSRLPNMAHLMG YWYHFCIMFEALFIMTLIDAGTRVGRYLLQELLGHFHPKFNDQHWAPGVYGCAALICILW GYLVLQGNIGIIWPLFGVSNQLLGTMTLAVGTTVIMRLGRKRYAWVTGIPCILMAIVAIA ADYENVFYSYIPAGKWILVAFSAAMFFMILIVLVEAVRSWIRLSSIPQDYRTQAEIEAES LVKYGKEVKA >gi|292596535|gb|ADCV01000013.1| GENE 92 95217 - 96842 1561 541 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0135 NR:ns ## KEGG: Vpar_0135 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 541 1 541 541 1033 94.0 0 MKHYIRSYWTKYKQLYKKGLKGIAAFLAIGAIIVFVLATIASRGMGVIFNEVMARQTMMR GTVTVESLSATPWGTLTFTGLVWKDPEGHELLNAPSGKVRVNMWDVVTRNFKSSAIKGIE LDDAVIVIDLDDNNRLDFAPISPDVNKPINEVEPRPKAPKKTTQERQEELGKKVRNFNWQ GQHLDLKITLRNSQLEVFNRNRHYVIKNVNSKIDLDSKRAIRIDMETGKFGGTAIGDGLV LKGRVDLKDVLKHRMPQLDLQFDVKGVDPSSLGFGENIHDAMTLLTKVTGDFNRPFAKGR VTMPILRIPALTFENVVGDVTYQDGILNFENVSANVYSGKLEAKGVYNLDTRAYTITGVA KDLDSSVALKAPEFLVPVSANLNFKSEGQPRDMEVWGNFWSGEGHYMLIPIQSITGNFHN KGRHLSFSDVKVNTKITTITTDALRIDDGQLTMGPLNITSHGGSNFILYDESFDEIDENM TRIKDDMKQARENSRRASDSAKGIDKSGLTAPDIKESMKDLKRSMDTAKDSLDNLSKNSK Q >gi|292596535|gb|ADCV01000013.1| GENE 93 97010 - 97741 490 243 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0136 NR:ns ## KEGG: Vpar_0136 # Name: not_defined # Def: copper amine oxidase domain protein # Organism: V.parvula # Pathway: not_defined # 1 243 1 243 243 384 95.0 1e-105 MKLKQLILSGIAVGALAFTSGMVQPAQAAVGAETATTTQSLKRPASVTTQHYINVDGILL EPIDNKPNVIYVDGQPLVALRQVSEALGYKVSWDAPTKTALIDMNIATLAVQPDSKQVVR KGKLQIINLDTSESLLPAARMVDGILYVSPNVFKLLLNDVTINKDEIYIVPQQSQLATDS NTQKGKRNGIETFLPDQGDKVIPYEEEETKEKKPLITVKRTNTKTDTKDTENTEYVRSNG LNR >gi|292596535|gb|ADCV01000013.1| GENE 94 98730 - 98888 120 52 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0138 NR:ns ## KEGG: Vpar_0138 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 41 62 102 113 65 95.0 8e-10 MGISLVGMYFMLKNDEFESDKVEKYHFNFKAGVYVWLFLVALYIYLYILTYY >gi|292596535|gb|ADCV01000013.1| GENE 95 99192 - 99689 435 165 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148994988|ref|ZP_01823966.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae SP9-BS68] # 58 165 7 114 114 172 71 2e-41 MASGRSEKELQGVTMLGHKTDYPTDYAPQVLEAFDNKHPDNDYFVKFNCPEFTSLCPMTG QPDFATIYISYVPDKKMVESKSLKLYLFSFRNHGDFHEDCINIIMKDLVKLMDPKYIEVW GKFTPRGGLSIDPYANYGKPGTEWEKTAKERLHFHDMQPERVAYR >gi|292596535|gb|ADCV01000013.1| GENE 96 99712 - 100551 622 279 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0140 NR:ns ## KEGG: Vpar_0140 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 279 8 286 286 425 89.0 1e-117 MVASFITCFMMGVTLSLQPASIIVGAHTHLREQSKWTRWNGYIMFVLLLFVLDMLVTNGI YIAFHDVYGNLLNIVYHDFNPMDMFFSESFQIVVILVFSLVLFQVLGLVDLAHGERDLSF YYDQVDEGKQKSSWMERYMGSQRGFLGASLVGLLYMLRMTIKTMWPYIVCLVWFKILAIL VNVLVSPSINRIMHADNELTTLIIFDPYIITYVVAGFLWGHVALHHDVTKVSHLASSMAI YLIPRLTVLVGAVFFIGLALIIIMVPITWDGVLNALTTK >gi|292596535|gb|ADCV01000013.1| GENE 97 100766 - 101680 651 304 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 4 293 3 300 308 255 46 2e-66 MSIVTNQTTELIGKTPVYQLQNTNIYVKLEKYNVGGSVKDRAVLGMLQAAKEQGRIHEDS IIVEATSGNTGIALAMVGAILHIKTVIIMPESMSKERRELIKAYGAQLILTPKETGMKGA LERANEILAKYPNAFTLGQFVNPANPDMHYRTTGNEIVEQVPNVDVFIAGIGTGGTFTGV TRRLKEHNPNLKAIAVEPAGSPAITEGKGGPHKIQGIGAGFIPENFDQSLMDGVQTVSDE EAFSEVQTFMRESGISIGLSAGAAIVAAKRMARELPKANIVVIAPDGVEKYLSLLDFGNN EYVK >gi|292596535|gb|ADCV01000013.1| GENE 98 101843 - 102451 671 202 aa, chain + ## HITS:1 COG:BS_cysE KEGG:ns NR:ns ## COG: BS_cysE COG1045 # Protein_GI_number: 16077161 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Bacillus subtilis # 11 161 6 156 217 170 56.0 1e-42 MQGLRDLWGKIQYNIKRVMDSDPAATSVWMVIWTYPHITALFWHFFAHRLYKAGWPILAR RVALHSRHVTGIEIHPGATIGRGLFIDHGMGVVIGETAIVGDNVTLFHQVTLGGMSSKKV KRHPTIEDDVLIGTGTKILGDITIGARTKIGCNLVIKHDIPKDMVIFETDPENMYVRKLS RNATAAQAEEKKIPDNYIEYYI >gi|292596535|gb|ADCV01000013.1| GENE 99 102565 - 102654 70 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIRRNMFLRIIGFRFGMYCIGDKFDLVWL >gi|292596535|gb|ADCV01000013.1| GENE 100 102848 - 103282 564 144 aa, chain + ## HITS:1 COG:FN1079 KEGG:ns NR:ns ## COG: FN1079 COG0783 # Protein_GI_number: 19704414 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Fusobacterium nucleatum # 1 144 1 144 144 131 48.0 5e-31 MKNVQQVNQYLADLSVWNVKLHNLHFNVTGPQFKSIHEYLESIYDEAFEYFDAVAEHVKM QGQFPLVNSAEYTKLTKIEELGQEDIPQAKVIDILLKDFKYMNDQAVAIRAAADEEGDFL LVSMMEDHVAYYVKQIWFIESMLK >gi|292596535|gb|ADCV01000013.1| GENE 101 103634 - 104383 1035 249 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0144 NR:ns ## KEGG: Vpar_0144 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 249 1 249 249 406 98.0 1e-112 MNTKHTRQMNRIRRALGIGTLCLVASVGFSHAESIAIPSARPMVDGVSADVETVSSSSKG QQHVNSDVITPNDWTYTALQRLIKHGAITDTHGFTFDGASYTKDELMPLIDEVVTKREQM NDNDREYALRIYQENMRDVMDYRIARDKKVTDERRQKLDEKRAEKAKKSGKMYQVSKDQQ EALDKAGDEVAKPEERALTDEQIKEKMKKFKIDDSRVKVNNEVRIRYADSKDKKSKTDAR MQTEMTFTL >gi|292596535|gb|ADCV01000013.1| GENE 102 104403 - 105662 1347 419 aa, chain + ## HITS:1 COG:CAC0628 KEGG:ns NR:ns ## COG: CAC0628 COG1914 # Protein_GI_number: 15893916 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Clostridium acetobutylicum # 6 417 3 414 417 423 54.0 1e-118 MIDFLKKQLFTVHQNGKQQVSEVFKYIGPGIIVTVGFIDPGNWAANLAAGASYGYELLWV VTLSTIMLILLQHNVAHLGIVRGQCLSECAYEFLPRYASRFVLSTAGIAAAATALAEFIG AAIALKMLFGIPILIGSILTALICTVMLITNSYRKLERIIAGFVSLIALAYLVEVNMVNV DWATAGIGWVDPNIPNESMLVILSILGAVIMPHNLFLHSEIIQSRQFNTQDPAIMKRQLR YEFLDTLLSMGIGWMINSAMIILAAAVFFAHGIEVTELEQAEELLRPLIGPAAGIIFAIA LLFAGFASSATAGMAGASIFAGMFGESYDMKDFHTRLGLALTYVPALLLIVFITDSFQAL LFSQMFLSLQLPITIFLQLYMTSSRKVMGEYANRKFTNILLWSIGIIVTIMNIYLLIVG >gi|292596535|gb|ADCV01000013.1| GENE 103 105969 - 106571 897 200 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0146 NR:ns ## KEGG: Vpar_0146 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 200 1 200 200 381 99.0 1e-105 MAKEIKVQETIQSDFSVVVNDIAEELLTRLNMDEDGSVIDMFQTGSFDPWQLFVFFGALE KALIEFRTDKRKKTVIVHAQPEALIGIGRVVTPVSTMLEHVLMSRLNDMSEGRLETGMLT VSAESIDYEGVNLKGRHVVIVCDLVDEDSNYLKECIKLCKELKASHVVAVPLMLWNPELI DNLTEESIKAELSHENRPLS >gi|292596535|gb|ADCV01000013.1| GENE 104 106549 - 107295 556 248 aa, chain + ## HITS:1 COG:RC0754 KEGG:ns NR:ns ## COG: RC0754 COG3022 # Protein_GI_number: 15892677 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Rickettsia conorii # 36 203 30 208 248 87 30.0 2e-17 MKIVLSPSKTKTITDVARNDEAVHHAVRDSQFQPNITKKIINHVQSLDVAALGKALKLKA DKAQAVFDFYQDFESHPVGIACESYDGIAFKYLDWLNLSDEAKTFGESHLVVMSALYGVV EPNMGVRNYRLDMVDKVGVNLYDTWREAVDAYFHKEDWILNLASKEYAKMVNHPKVVTIE FWELRGNTFKQMSTSSKMSRGVMAHECLTRQVKHVRDLPREINGFTCVSDIESITIPSES MTIRYERK >gi|292596535|gb|ADCV01000013.1| GENE 105 107375 - 108418 1205 347 aa, chain + ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 3 345 26 350 350 260 39.0 4e-69 MSVTDEEQLQLIYKKAYEVKAKYVKPVAYYRGLIEFSNRCIKNCNYCGIRRENDKAERFD MNREDIIKMAQWAYDHEYGSITLQSGERCDDAFVDYVVDLIRDIKAIGDGSLGITMCVGE QSEEAYRRMREAGASRYLLRIETTNTDLYHKIHPRDELHSFETRVECLRRLRRVGFQVGT GVMIGLPGQTEDDLVNDILFYRDMDIDMIGMGPYVVHHDTPLGQEALAMGIDDEEGKLRR VQLGLKMIALTRLFLKDVNIAATTALQALDKLGREKGLAAGANILMPIITIPEHRAKYLL YDNKPCVDDNAEQCKDCLTRRVMSIGDTVGWKQNGDSKHYGKRTGEF >gi|292596535|gb|ADCV01000013.1| GENE 106 108798 - 110864 2425 688 aa, chain + ## HITS:1 COG:aq_001 KEGG:ns NR:ns ## COG: aq_001 COG0480 # Protein_GI_number: 15605613 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Aquifex aeolicus # 2 682 3 691 699 544 41.0 1e-154 MKEYSSDKIRNVAVVSHDGAGKTALVESLLLTSGAVDFVGKGQDNKHIMDFEPEEIKRNV TIQLGMAPCEWHDHKVNFIDTPGYNEFHGEVRAALRACDGMLMVLSSTSGVETDTVRAWD YAVELQMPRMAFINKMDVDGADFFGTIERMRELFGKGIMPLQIPIGEGADFEGVVDVAKM TAFTYKDGQPTEVAVPAHLIEKAQEIREMTVEAAAEGSDELLEKYLEGEELSLEEIRQGL REGMISGRVCPIMCGSATSRIGLDQVLDRMIRYMPDATKKVMTATDAETGEQCVVHVDKP LTAFVFKTLLDPFAGKQSFVRIFSGELKEGDRLYDVNQGVEEKWGKMVTLIGKQQIPVSA AKAGDIVVIPKLANAKTGDTLTAPDFKVTYDAIRFPQPLYTVAMEPVKKGEEEKLASAVL KVAEEDPTCVVVKNAEARQLQIDCMGEVHLEHILNKMDRKYGVQAKLVAPYIPYRETIKG SAETESKYKKQSGGHGQYGHVKIQVDPLYDGSEFAFVDKIFGGAVPKQYIPAVEKGAKET LDKGLIAGYPMIGVQVTLLDGSYHSVDSSELAFKVATSQAIKDVIPKAKPVLLEPIYEVN VFAPDAFMGDIMGDLNSRRGRVLGMEQSERTGISVVKAQVPLAEMSDYVTALRSITQGQG VFNRQFYTYEEVPHKQAEEIIAAHKTQE >gi|292596535|gb|ADCV01000013.1| GENE 107 111147 - 111623 526 158 aa, chain + ## HITS:1 COG:PM1255 KEGG:ns NR:ns ## COG: PM1255 COG2731 # Protein_GI_number: 15603120 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase, beta subunit # Organism: Pasteurella multocida # 1 156 1 154 158 112 43.0 2e-25 MFFSNITADYTKMGYPKAIVRALDFLKNTDLKALPGGRHAIEGDMMYANVDDVETKLFEA TKPESHRNYVDIQFMVSGEENMGFFVDKGLVKPVESYPDRDCYFYPNEAVDEGQIHCPEG YYTVFFPSDVHRPLLAVNDKPIKIRKVVVKVHVSLLGD >gi|292596535|gb|ADCV01000013.1| GENE 108 111625 - 112551 447 308 aa, chain + ## HITS:1 COG:CAC0875 KEGG:ns NR:ns ## COG: CAC0875 COG0697 # Protein_GI_number: 15894162 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 8 293 15 299 306 169 37.0 4e-42 MKQYEVIGVIITLLGAVLWGVSGASVQFLSNFRDMNLEWLVTMRLITAGLLTVIYAWFRF GNSIFNVFHSVKDTLGLIIFGVFGMALCQYTYFRSIALAGAGIATVLQYLAPSMIIIYLL VRYGKRPSKGETVSVILALVGTICLMGNGDGLSIKSFPMAVLVWGLLSAVGVAVYSISPV DLLYKYGTLPIVGFGMFISGIVAAILFHQPNSYAVWDAWTIIGCFNVIFLGTIVSFNAYL EGVKRIGAVPGSILSSIEPISAAFFGWAFLGNEFSLLGLIGMAMIIATVVIIALESGRGT WKKSNGRA >gi|292596535|gb|ADCV01000013.1| GENE 109 112524 - 113069 518 181 aa, chain + ## HITS:1 COG:CAC0875 KEGG:ns NR:ns ## COG: CAC0875 COG0697 # Protein_GI_number: 15894162 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 7 176 14 183 306 115 37.0 4e-26 MEEKQWKGMSLAIMGALFWGLSGTSVQFLESAKHINVEWLLEVRLLVAGILTIGLAYLRE GKRIFSIFKAPKDIGKLLIFGVLGIALAQYTYFRAIAISGVGVATVLQYVAPTMIIIYLF LRYFKKPSTPELFCILLALVGTICIVMQKGLDISSFNEKALFWGLVSAASICVYTFNLLS Y >gi|292596535|gb|ADCV01000013.1| GENE 110 113105 - 113464 223 119 aa, chain + ## HITS:1 COG:FN2101 KEGG:ns NR:ns ## COG: FN2101 COG0697 # Protein_GI_number: 19705391 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 1 107 195 301 301 58 28.0 4e-09 MFICGILSVIMFQQFDSEAVVDSMTLLGLFAIIILGTVVSFNAYMEGVRLIGAVQGSILS SLEPISAALFGWALLGNEFTVIGIFGMICILATVFIIAWDRQRTIKREVLTKLNKTILE >gi|292596535|gb|ADCV01000013.1| GENE 111 113634 - 114929 1785 431 aa, chain + ## HITS:1 COG:ECs1922 KEGG:ns NR:ns ## COG: ECs1922 COG1473 # Protein_GI_number: 15831176 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Escherichia coli O157:H7 # 2 429 8 435 441 310 44.0 5e-84 MSVKDFVQQRRDALIAMRRDFHMYPEPAWLEYRSAAKVADRLISLGYDVALGADVLDLDS RMGLPSDEVMKAAMDRAIKEGANPELVEKMGYGKTAIVATMKFGGEGPVVAFRVDMDSND VIEAKEDSHVPTKEGFRSCHDKAMHACGHDAHMTMGLGLAEYLAAHKDEFKGTIKLIFQP AEEGVRGAKAMAEAGVVDDVDLMFGMHIGFNENLSNCFACSDHGFLATTKLDAVFHGYSA HAGGSPEKAQNAMLAGCTAVLNLQAIARHSQGASRMNVGVFESGTGRNVTPDVAVLKLET RGATTEINDYMIERAKTIIKGAAEMHDCTFEITKQGETPAGRISDDLAREVQAIVEPLGI FKEVPFDYSGGGSEDCAYFLNRVIDRGGRATYMVVGSAIKAPHHNPLFDIDEEDMLNGIV ALGTIAAHYLK >gi|292596535|gb|ADCV01000013.1| GENE 112 114993 - 116237 1347 414 aa, chain + ## HITS:1 COG:HI0588 KEGG:ns NR:ns ## COG: HI0588 COG0624 # Protein_GI_number: 16272532 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Haemophilus influenzae # 2 403 3 404 411 315 44.0 1e-85 MIQRERLVKDFDAMAQLTAPGEGINRLAFTDADWEGRQYIIDRMIDAGLSVEIDDFGNII GYKIGKKPDLPVVMVGSHTDSVPNGGNYDGVVGVLSALEVIRSMIDDGYEHDHTIAVVSF MCEESGRFGDATLGSKAMRGELRLQDLHRLVDKQGISLYEALKGRNLNPDGIEAMEYKRP VKSFTEIHIEQGKVLEHEQKTIGIVTGIAAPERFYVTIRGNADHSGATPMNLRHDALCGA SKIILGIEEIASMQEEPPVVGTVGVVEVTPGAMNVIPGAVKLGVDIRSISKAARNSVVTL VKEFIDITAEKRGLSYTIETIAQDYPVEMHPAMIREIEEAVKSVGVEYMTMPSGAGHDAM HWAEVVPTGMIFIPCRDGISHNPAEFAEMDDIVTGAAVLDKVLRKLSLEETKLV >gi|292596535|gb|ADCV01000013.1| GENE 113 116469 - 117722 1541 417 aa, chain + ## HITS:1 COG:PM1299 KEGG:ns NR:ns ## COG: PM1299 COG3069 # Protein_GI_number: 15603164 # Func_class: C Energy production and conversion # Function: C4-dicarboxylate transporter # Organism: Pasteurella multocida # 1 417 8 432 432 251 40.0 2e-66 MVITGIVIVVATFIAIIKQFETRLVLLLSGLLMCFIGGQLGAGTTAFVKELTNPGLVPTI CTVLGFSYVMEYTKCTEHMVYFISAGLKKMTKIIIPGAVIITFLINIALPTAAGCAAAVG ALLIPALIRSGVHPAMAGSAIFLGTWGSSLSPGLMFNPQVAQLAGVDVMTVIASFSMQAI IGIVVAAILLNIVAIVKKEHTGYVMKNDTVEEGKEFKVNYFYAIIPIIPLVLLVLGSKQV AVIPEISVPVSMLIGTAIGIIAVRPNVAEAVKKFFRGTGDGMCDVVGLMAAAACFTAGMQ LIGLTSALIDGMKNSQQIAQIGAAFGPFLLAVISGSGNAAALAFNGAVTPHAADFGYGIM QLGSMAQIGAGIGRSMSPVAGAGIIIAGLAGINPMEMAKRNAVPCIIATVVIMLLLL >gi|292596535|gb|ADCV01000013.1| GENE 114 118039 - 118908 851 289 aa, chain - ## HITS:1 COG:BH3925 KEGG:ns NR:ns ## COG: BH3925 COG0583 # Protein_GI_number: 15616487 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 1 283 1 283 289 203 35.0 4e-52 MDTKDCTILKTLAEENNITYAARRLFMTQPALSERIKKLEKEFNCPIINRQTRGVEFTYQ GQRLVRYAEDLLNSYTSVRQELLAMGSEPRGTLNLGCSNVFAKYHIPHILSTFKETYPHI DIIMYTGLSYKLYHDFLEGHLHAAIIRGAHTWAESKEHIWSEPFCFFNKTPCAVEDLPRL PYIHYQTDPNLQQTIDDWWYSHYSQPPMRTIEVNDIDTCMKLVNQGLGFTILTQSCGNDY PNLFKETMKALDGHIMTRDTWMYTRHSALESKPVQAFYSFMKTWADTKV >gi|292596535|gb|ADCV01000013.1| GENE 115 119107 - 121404 2918 765 aa, chain + ## HITS:1 COG:ybhJ KEGG:ns NR:ns ## COG: ybhJ COG1048 # Protein_GI_number: 16128739 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Escherichia coli K12 # 1 764 9 760 761 889 57.0 0 MVKLISNGVFLYHGTDIVPADSSTALDQQEVFNKERAYKETMAYRILMDHQQHEGDQDLR IKFDALTSHDITYVGIIQTAIASGLDKFPIPYILTNCHNSLAAVGGTINEDDHVFGLSAV QRFGGVYVPPHLAVIHQYMRETMAGCGKMILGSDSHTRYGALGTMAIGEGGPELVKQLLG RTYDVQRPEVIAIYLDGKPKHGVGPQDVALAIEKAVFANGFVKNKVMEFVGPGIEHLSMD FRNGIDVMTTETTCLTTIWRTDSTTKEFLTLHGRGDAYKELNPGDVAYYDGLVKVNLREV ESMIAMPFHPSNVYTIKEINEGGRDLLAEIERQAVEQLDNKSLSLQLPEKHFDGKLHLDQ GIIVGCSGGLYENIMQAANIVRGKSVGSGRFAFSVYPSSQPIYLELMKNGALVDLMSAGA IVRTAFCGPCFGAGDTPNNTGLSGRHATRNFPNREGSKPGNGQISSVALLDSRSVAATAI NGGALTAATDIDYDDVVPAYHYDDKPYESKVYSGFNEPKKNTELIYGPSIKPWPAIKELT PNVLLKVVAYIDDPVTTTDELIPSGETSSFRSDPYALSEFALSRKVPEYVGRAKTVRDWE KSRQEGESTVELVAAYEEVKQALGLSESVEDMAKSTAVSSMVYANRPGDGSAREQAASCQ RVLGGGANIAIEYATKRYRSNVINWGMLPFVTSEEDSKTMVVGDYVYVPNVRDQLFSDSD DYTAYVISGGAKKAEITLHLGHLSDEEKDIIAAGCLINYYANSKA >gi|292596535|gb|ADCV01000013.1| GENE 116 121429 - 122568 1202 379 aa, chain + ## HITS:1 COG:BS_yraM KEGG:ns NR:ns ## COG: BS_yraM COG2828 # Protein_GI_number: 16079741 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 9 379 6 363 367 273 44.0 5e-73 MNGYKEIPVTYMRGGTSKGAYLLKDTLPTDQAARDRMILDLYGSPDARQINGIGGADPLT SKVAIVNSSDRDDADIDYTFGYVGIADAVVDYEGNCGNISAGAGVFAIMEGFVKAIEPET VVRIFNTNTNKVIEAHVPVRDGKPVIDGDFAIDGVPGTGARITLYFLEPSGSKTGKLLPT GNVQDTITLADGRTIQVSLVDAANPAVFVKATDLGYEGTELPAFTETDGGVLLNTLEDIR TTAAVMMGLAPSKEAASPAVPKVCMVSAPQTYVASDGRTIEGNSIDIVARTKALAVMHKA YAVTGGICTATAALITGTVANEVVSERAKETNQVTLAHPSGKFDFEICLTKDKGWHVEKA GVARTARPIMKGIAYVKGE >gi|292596535|gb|ADCV01000013.1| GENE 117 122571 - 123992 2063 473 aa, chain + ## HITS:1 COG:YPO0081 KEGG:ns NR:ns ## COG: YPO0081 COG0471 # Protein_GI_number: 16120432 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Yersinia pestis # 2 473 3 474 475 563 64.0 1e-160 MNKLLKIAIMFAIPLAMWFITPPEGLSVGAWRLLGFYLMAIVGLVVKPWPAPIILLLSIA DSAIFLNATKNVLSGYASTTVWLVFSAFSLSVAFVKTGLGRRIAYLLIKSLGHTTLRLGY VTALLDLIISPVTPSNTARCGGIVFPIMNSVAKALGSEPGESAKKAGSYLMVNTYMVTKV TSLMFATAMAPNLLAADYMNKILGVDINWGLWALALVVPGLVMLLITPALVYYLDKPSIQ HIDSHAIADEGLKELGPMSGREKSLIAIFILALVGWALPSILTQGFGIKFSLDATAVAIV AMVAALVTGVIKWEDMLESKGAWNTLIWFGGIIGMSSALSKVKFFEWLADFMGTHFNFGD NPMLALIIIGAISIAVRYLFASGSAYVVAMLPVFLTVGKVAGVNPMALSLLLAATNSYGG ALTHYGGAAAPIVFGAGYNTVKSWWIIGGIFAIMCFIVNLTVGYAWWEILGIL >gi|292596535|gb|ADCV01000013.1| GENE 118 124192 - 125370 767 392 aa, chain - ## HITS:1 COG:CAP0029 KEGG:ns NR:ns ## COG: CAP0029 COG0477 # Protein_GI_number: 15004733 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 1 391 1 389 399 265 37.0 1e-70 METWKRTVYICAFCIFFMSLGISQVSPILPLYFHEMGLSDTGSIAQWSGASMGITFLIVC LAAPFWGRLADRKGRKITLIRSSLGMAICSILLGFQTTPEGVFLVRTLQGLVSGFYPASV TLIASETPQNHTGWALGIIGSFSLAGSLAGPLVGGYLSDVVGIRNDFFIIGALMLISFGL TAMLVHENYVPKPLVEKQTFRNLKTHLPEFSSLVALSATSFLYAISVTAISPIMTVYIKG MLPSNTENIAFISGAVFSAMGIAQFFSSSPLGKLVDRIGPRKVLIYSMIYVGLLNIPQAY VDSVYVLGFIRFLQGFGLGGMLPALNTYLASKTPKEYTGQVFSYNQSCLSMGYFLGSFGG SIVAAQFGFTTLFWACSLTFIGAALWVALKLK >gi|292596535|gb|ADCV01000013.1| GENE 119 125383 - 127611 2296 742 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0175 NR:ns ## KEGG: Vpar_0175 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 738 1 782 790 378 32.0 1e-103 MSFYFTDQIQQSFNKIFHQCNKDIAWAGKAELDALVKLDEEGQKIPGIGDVYAILARVYS GPQFTWIEAGFPEDDTKAYSYLHTAIRKGSAIAILQAMRTSGALTPTIEKELPMTKDQAF QRVYEGAQKGCSYCAYAIANVYQWGDYHILPSARKVANEGEPSTFVRFLKSLFVQADQRR STNKINAIAQQWLRKSADAGLVIAYRNLRITYVEQDNRAMEEQVIFEGAKAGLPLMMYLA GDICKSRGEHERALEYFERGAAMNNGMCLREAAEYYAKPCESNKRIPQNIQKALKYYERA AISPDYLDFNDHAYATMQAIILRTLNIDGQSQDWSRIAHLLQQPAIYTLDAIWPYLAYVF TFKKGNTPAIRTAIECVNQASKCFDRYGSYDYADHLWQLAAGYCYEIGAITKEPDLDQAV TFYEHARESIKRLNTRNDNWLGTGEPLAIPDEASERLEAFELVDGHYQYKEGITQSSTTC NPMPPAWPQNSVDVLEIFENSTTGWRTNKYDWNFIQREWDTQKYLSFIIYDNRQSIENII YDVYSIVMFHNEDKNSCTIYLYGYIEEPSELDENVDPRVYEIRYFKEMSIPAGLALIKDF YDNATLPVIDESWEKQYKNTTPPREYVLTCDNDIFYLNQYELSNQMIKDALEGVANGKYD IIAVRPSNLDDPGISYFIERGKGKNLHISLYITIEDDVEDDIVYGFKRESSNLTSINYWI QESIASNKLPDLSDWEEVKKKD >gi|292596535|gb|ADCV01000013.1| GENE 120 127759 - 127830 96 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVDESKDKVKVKIFLDFHSIETL >gi|292596535|gb|ADCV01000013.1| GENE 121 127831 - 128061 64 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQRIPLSQDTNISLTTNARVTSHHTRNEIHSFPCALGGPFNKLRTTGSQLIPLSVSAFPI FISTSSVSLGEYKIII >gi|292596535|gb|ADCV01000013.1| GENE 122 128203 - 129672 1998 489 aa, chain + ## HITS:1 COG:aq_582 KEGG:ns NR:ns ## COG: aq_582 COG0147 # Protein_GI_number: 15606032 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Aquifex aeolicus # 5 489 6 492 494 394 43.0 1e-109 MIFPSLDRVKAIAPGYDIVPVYMEILSDVRTPISVLKALKQVSSHTYLLESADNSNHWGR YSFLGYDPKIELFCKNHKMTIKDGTTRTFECSDPATEIRNILSQYKSPRLEELPTFTGGF VGYFACEYIRYIEPTLDFPTPDDNSAMVNDVDLMLFDKVIAFDHYKNKIYLIANISTNDL ERNYNKAELELKALADLVVNGKEADIPKGILKTEFTSEFTKDEFEAVVKKTQHYIKEGDI FQCVVSNRREAEFEGSLLNAYRVLRTLNPSPYMFYLSGGDVELTGASPETLVKLTDGKMY TFPIAGTMRRGKNEAEDLAIEEKLINDEKELAEHNMLVDLGRNDLGKISKFGSVKVEALH MLQRFSHVIHITSTVSGDIQDGKDALDAIGATLPAGTLSGAPKIRAIEILHELEKSPRGV YGGAVGYIDFSGNMDVCIGIRMAMNKGGKVYVRAGAGIVRDSVPASEYNETLIKGQSMIS AITDAQEVE >gi|292596535|gb|ADCV01000013.1| GENE 123 129672 - 130238 608 188 aa, chain + ## HITS:1 COG:CC1897 KEGG:ns NR:ns ## COG: CC1897 COG0512 # Protein_GI_number: 16126140 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Caulobacter vibrioides # 1 187 1 186 198 204 54.0 6e-53 MVLLIDNYDSFSFNLYQLVGSIDSDIKVIRSDELTVEEIRALKPDYVILSPGPGRPADAG VYEDLLRECKGEFPILGVCLGHQAIGEVFGGTVSYAKQVMHGKQSVAKQVHPSKILKGVP EQFEVARYHSLAIVDETIPSELIVTSVTDDGEVMSVEHKDYPIYGVQFHPESIMTPNGEQ MIRNFLEK >gi|292596535|gb|ADCV01000013.1| GENE 124 130239 - 130436 89 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAIVYDMYCRGAIIGTAKIELAGNKVLRNDLAAPRSGALSTWSSERSYFCPIVQGLINSP SNTQQ >gi|292596535|gb|ADCV01000013.1| GENE 125 130819 - 131829 1408 336 aa, chain + ## HITS:1 COG:MJ0234 KEGG:ns NR:ns ## COG: MJ0234 COG0547 # Protein_GI_number: 15668409 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Methanococcus jannaschii # 1 335 1 335 336 278 46.0 1e-74 MIKDALYAVTHGQDLSYDLAKDTMNKIMSGDVAEVPMAGFLCALAAKGPTVDEVTAFAEV MREKAGSVSHEGTVIEIVGTGGDEANTFNISTTSGFIISAAGIPVAKHGNRSVSSKCGAA DLIEALGAKLELNGEQNEAVLNKANMCFMFAPVYHQAMKYAGPVRKALGVRTVFNILGPL ANPAGATVELMGVYDKSLVEPLARVLANLGVKRGAVVHGFDGLDEITATNKTYVCEINNG TFTNYEFDPKEYGFEYADKTELEGGDATVNAEITRRVLGGEQGGKRTAVLLNAGMAIYLA KDGITLAEGIEEAKHIIDSGKALATMEQFVKATQEV >gi|292596535|gb|ADCV01000013.1| GENE 126 131833 - 133404 1482 523 aa, chain + ## HITS:1 COG:Cj0498 KEGG:ns NR:ns ## COG: Cj0498 COG0134 # Protein_GI_number: 15791862 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Campylobacter jejuni # 1 256 1 257 258 192 45.0 2e-48 MILDKIIEATKIRVAQEKQVEFPESVKAVALALPSDTGFPFEAALRQQDFNFICEVKKAS PSKGIIAEHFPYLDIAKEYEVAGAAAISVLTEPDFFKGDKKYLQEIASTVKIPVLRKDFI IDEYQIYQAKVWGASAILLICACLDVPTLTKFRELADSLGLSSLVEAHDEAEVQMAIDCG ARIIGVNNRNLKDFTVDVQNSVRLRNLVEDDVIFVSESGLETPEDIQVLRDNNIGVALMG ETFMRSPNKVEKLAYLYGPTYYTPKIKMCGISKVETIPAVVEAKPDYMGLVFAPSKRQVT VDQAKTLVEELHKQYANRYNRNAEQYSNDVVQDGTIINALQEETATGDAHEGTLTSTENI SPTLIHQEFIKTVGIFVNETLDNLVTIATEVNLDAVQLHGDEDEAFIQSLKGRTNVEVWK AVQIRSAADAEAWIDSSADMLLFDAYHKDERGGTGEVFDWSCLDEFERPFMLAGGIDSTN VARAIRTVRPYGIDISSGIETEGVKDDEKIKAFTNIVRTIAMP >gi|292596535|gb|ADCV01000013.1| GENE 127 133447 - 134640 1619 397 aa, chain + ## HITS:1 COG:CAC3158 KEGG:ns NR:ns ## COG: CAC3158 COG0133 # Protein_GI_number: 15896406 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Clostridium acetobutylicum # 6 389 2 385 394 538 68.0 1e-153 MSEQRHGYFGSFGGQFMPETLMNAVIELEEAYNKYKDDPDFVRELEDLHKKYTGRPSLLY YAERMTKDLGGAKIYLKREDLNHTGSHKLNNVIGQMLLAKRMGKTRVIAETGAGQHGVAT ATIAALMGMECEVYMGAEDCERQALNVYRMELLGAKVHPVTTGTSTLKDAVSEALREWTN RMSDTHYVLGSVMGAHPFPMIVRDFQSIISREAREQILEAEGKLPTAVMACVGGGSNAMG MFYHFIPDEGVRLIGCEAAGRGIDTEEHAATIAKGSVGIFHGMKSYFCQDEDGQIAPVYS ISAGLDYPGIGPEHAYLHDSGRAEYVPVTDDEAVDAFEYLSRLEGIIPAIESAHAVAHAR KIAPTMSKDDIIIICLSGRGDKDVAAMAKYRGVDLHE >gi|292596535|gb|ADCV01000013.1| GENE 128 134633 - 135424 435 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 12 254 17 256 263 172 40 2e-41 MSNIKDAFTKGKAFIPFISAGDHGIENTERYIRIMVKAGADMVEIGIPFSDPTAEGPVIQ EASTRALSTGVKINDIFDMVRRLRTGDDAVTIPLVFMTYLNPIYVFGREKFFTLCEEVGI SGVIVPDMPFEEKGELASVAHKHGVEVVSLIAPTSENRIEMIAKDAEGFVYCVSSLGVTG MRSEIKTDIKSIVEMIRKYTDIPVAVGFGISKPEQAEAMARVSDGAIVGSAIVKIVAEHG EHADQALFDYVQSMKQAVLKAGA >gi|292596535|gb|ADCV01000013.1| GENE 129 135566 - 135862 376 98 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0164 NR:ns ## KEGG: Vpar_0164 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 98 1 98 98 135 93.0 3e-31 MKAKLIKAVALASLGVFLTVGISANVSQAKDYHFKIGENHRMVKNDDGTVDSSDHPWYKV NDKKKKHRKYRISEREKHDKNTTAKRSERHQRSESSND >gi|292596535|gb|ADCV01000013.1| GENE 130 135852 - 135935 64 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSTYTTDIFLTTKIRAINYAGDNYES >gi|292596535|gb|ADCV01000013.1| GENE 131 136036 - 136923 937 295 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0165 NR:ns ## KEGG: Vpar_0165 # Name: not_defined # Def: protein of unknown function DUF805 # Organism: V.parvula # Pathway: not_defined # 1 295 1 295 295 577 96.0 1e-163 MKQRVYEILYRELVENYANSKGRTNTADFWLTISAISFVYGLIICITGLATYIPYGFLYA VSIGGGVLFVLSILLCLPKIMLMARRLRDSNNDPTLMILLLVPILGWLALLYLFCKRTSP VSNELEEKRSVSGLFIVSILVLGCLATSAGSTMINHNFMVEETAYGNLEPSSLTKQANRL LQSETATTEGRTVVSNYYEALNKKDYHGAYRYLSARAMERYGTFELWEQAMTKEEVPKVK AIQLDYVSQDQDDDIVVNYMGFTITFEDNLEPVLVRLHNEGKGWGIVAIEAAEED >gi|292596535|gb|ADCV01000013.1| GENE 132 136927 - 137496 421 189 aa, chain + ## HITS:1 COG:PA0563 KEGG:ns NR:ns ## COG: PA0563 COG3152 # Protein_GI_number: 15595760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 21 130 11 111 117 70 37.0 1e-12 MSTINIYDLNYTDAFKLGIRNYANFNGRASRSEYWRFVAGVTLIQGLLGILALLCSNLGF PNYEALIDNVTVGVSLFFIVPNIAITTRRMHDIGRSGWTQLISFIPVIGFFIFLVYELRR GDERENSYGERTGYTPITPEVSKATGLEETPSRHQDWAMGIAIFIIQSIIIADIIREILW YGINGNGYM >gi|292596535|gb|ADCV01000013.1| GENE 133 137715 - 138350 539 211 aa, chain + ## HITS:1 COG:PA0563 KEGG:ns NR:ns ## COG: PA0563 COG3152 # Protein_GI_number: 15595760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 39 164 1 115 117 68 33.0 1e-11 MKSCPYCGHAVLKTDCYCPECGHVSRPQISLDKYNLGLIENFKQCLVYKYADFDGRASRS EYWHFLLVYQLLFVAILFTCAFLSYISPLSSVVGVGFGLVILVLLSVIMVIPGVAVSVRR LHDQGRSGGLVFIGFIPAVGTIILLILMALPGESQSNRFGSPTGQVVVTKQMARELGLID TTPSMGLTAGLFCAIFVLWFLVDKLLMTSAM >gi|292596535|gb|ADCV01000013.1| GENE 134 138505 - 138861 376 118 aa, chain + ## HITS:1 COG:PA0563 KEGG:ns NR:ns ## COG: PA0563 COG3152 # Protein_GI_number: 15595760 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 70 34 110 117 80 54.0 6e-16 MDTALASVVGLISVVYNLAILLPSIGLAARRLHDIGKSGWMLLISLIPFGIIYVIYLLAQ KGDEGDNQYGSPMSYEVVTAEEAARTGLKETPTDDMDRKFMYVCIAIIILELILMSAI >gi|292596535|gb|ADCV01000013.1| GENE 135 139328 - 142162 3373 944 aa, chain + ## HITS:1 COG:FN0067 KEGG:ns NR:ns ## COG: FN0067 COG0060 # Protein_GI_number: 19703419 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 2 942 5 933 933 945 50.0 0 MDYGKTLHLPETEFPMRGNLPKREPEILKFWEDNKIYQKRLELRKDAKPFILHDGPPYAN GKLHIGHALNKTLKDIIMKYKTMTGHYTRYIPGWDTHGLPIEHAVIKNTGLNRHEMAPLD LRNKCKEYALECVETQKQDFIRFGVLGEWDRPYLTLRPEFEVKQLGIFGEMAKRGHIYKG LKTVYWCTHCETALAEAEIEYAEKKSFSIYVKFPYVSEKKVTLPAGVDPKQAYSVIWTTT PWTMPANVAISVNPELEYGWVKVGEEYYLMATELVDAAMKDIGIEDYEIVNRFSGADLEL AEFKHPFVERKSTVLCGDHVTLEAGTGCVHTAPAHGEDDFNIVMRYNKEGKTELPIVSLV NETGNYTKQVDDNRYGDTEFPLAGVEIHDAEVPVIKILAHNNALLHKSSLRHQYAHCWRC KNPVIYRATEQWFSSVDGYRQQALDAIDNQVQWIPKWGHDRIFNMVRDRGDWVISRQRIW GVPIPIYYCESCGEHIINDDTIKALQEKVALEGSDAWWAHSAKELLPEGFKCPHCGHDEF KKETDIMDVWFDSGSSWAGVLEVNDLEVPCAMYLEGSDQHRGWFNSSLLTAVATTGKAPY NSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDVYGADVMRLWVSSADYQADVRLSKDIVK QLSEVYRKIRNTFRFLLGNLDDFNPNTDKVAYAAMSEFDKWALLRLEEVRQKVTDAYENY EFHMLYHAIHNFCTVDLSSIYLDVMKDTMYAESKNNVARRSAQTAMYEILKTLVAMVSPV LSFTAEEVWKYMPKEEGMRESVMLQDWPQGHPEHFNQELADKWNQLLDLRTSVQKALELA RQDKTIGHPLDASVTVYAEGAAFDALNALGEEGLAKLVIVSEAHIVNGAAPAEAVKDEET GVATVVVASNLEKCERCWIHRDTVGQNSEHPTLCARCADVVKTL >gi|292596535|gb|ADCV01000013.1| GENE 136 142244 - 144616 2172 790 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0175 NR:ns ## KEGG: Vpar_0175 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 790 1 790 790 1532 94.0 0 MAQYFTERLQKVFHMIFTSYNQNMAQEGLRQLELIVNNQQNPSQLKDRALRNDKTSRLES DIDTKEDALKIANDSEARELGDAYALLARVYAGPRFTWEESNFPEDNMRTYQCLHDSIRR CSPIGTLQALRIKGSITPTVEKDMQISFDDAFRIVYDHANRGDAYCQYVIGNVFFWRDDN RIDSAEAMLTPPPMSWTKRIQRSLTANSVRDRIAALQGTVPDEKLQKNASNLAKEWFNKA LDNGLAMFQGNLRNIYIDEADFSNARRVAKTAAELGNPAMMLYTGLDCHENGKFEDAFTW FTKGAALGQSESIAELADYYYHFYDAKNLRCTIPYDPVKAIGLYRRAATKEFSDAGYTAL QAAFGYIFHIGHLSLDWGLIADLTHMAATKDRFMFALPYIGYMRIHGLGVTKNIRFGVQS LLRVLDEEQRAFEEENRVLFYDITRALTRVALGYAYEKGYVTGKPDLDQAVSYYEQSHQY ILSHKANLDPEIKDIPIDDEAEERLAAFEEVDGHWQYKEGIAESTTTVRPAPAAWPQDAA RLSVTMDDFLWDTTLYDWQTIETALESQEEMKLSFYNRFLSIPDVLRNIFKLDVTRMLRN HYQVRLHGYDPTEGQEIVYKALFNKENTLSLLKELYHNRHLPSLEENWSIEKNEEKPTWH YVLDVDQQPFLLEEYDDANAMIQTALQGLKEKKYEQINIRTHDFVGPSYFIFKGNQSTPF RVQLYLKESARHTIDDDGNQRDTPGKTYLFEQYVGNEVSLNYWIQKTINTLEIPELDNWK QLTVPKDLQT >gi|292596535|gb|ADCV01000013.1| GENE 137 144928 - 145710 1259 260 aa, chain - ## HITS:1 COG:STM0830 KEGG:ns NR:ns ## COG: STM0830 COG0834 # Protein_GI_number: 16764192 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Salmonella typhimurium LT2 # 38 255 27 244 248 164 42.0 2e-40 MFKFKKLTAIALVAIAAMGLLAGCGNDKPKMTQQEGVLRVGSETTFPPFEFTEGDKYVGF DVDLSEAIAKKLGLKMEFKSMGFDALIPAVQSGDIDMIAAGINATPEREKALDFSDVYFD QGGFITVVRKDNTTIHNMDELAGKTVGAQIGTIPVEMAQKIPGTTVKQIDSNANIFMELK AGTIDGAIIDNAVAMYYLKQGADQDLKLVGEPTQSPGTVLGVKKGNKALQEAVNKALKEL KEDGTYQKIYDKWFGDYNKK >gi|292596535|gb|ADCV01000013.1| GENE 138 145884 - 147065 1285 393 aa, chain + ## HITS:1 COG:FN1186 KEGG:ns NR:ns ## COG: FN1186 COG1473 # Protein_GI_number: 19704521 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 34 389 2 353 359 207 34.0 4e-53 MSLTTTFADLCKSFAPDAFAINYTLAKNPEISSQEFESVKTIGAVLEKYGMDVTYEFCGL PTAFKASAVKVDNPQGRLAILCEYDALPEVGHACGHSASGSMSVLAALTLHKMQQEGVAF NMDIDIIGTPDEEAMGCKVDMCNAGVFKEYDFAIMVHLDGEETRPNSQFLALDCFRAKYH GKPAHAAGEPWNGVNAVNGVQLAIHAMDMMRQQVRPETRIGTWIIAGGTASNVIPAFGEL EVTVRHTEREYLNGLSEQIKKIFEGAALCTGTTVDVEFYGNPYDDMNQNNRGTALIEEVM ANMGLDFEPGPAALGGSSDIGNVSYQCAAFHPKLRLAGEPKVCHSKEFAAAMLEPTIEQT IIDGANIIGGTVLRLVEHPEILEEIVAEFNNSK >gi|292596535|gb|ADCV01000013.1| GENE 139 147122 - 148273 1224 383 aa, chain + ## HITS:1 COG:lin0196 KEGG:ns NR:ns ## COG: lin0196 COG0561 # Protein_GI_number: 16799273 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 241 369 141 263 270 89 41.0 8e-18 MATTETLEIKNYIGLTGDKPIRFIASDVDGTLVNDAKAIPEDAIEAIRAARESGIRVAIA SGRAWNEMNDVIEKLPCLRYFMCTNGAYVMDKDENRSLFHVSFDKEQALHLLRKLLTYGV YVEAYVKDQIFGMYPPSRCITPERLGVCASERAEEDKKTVHGIMDNHLPNTKNQIFGIGD TRLPGATYDHYALAEGNEAAKVKMSECEIEQSNFFFRPNIRPFILATRTMVCDLLAHMES LDEGPEKIQIFYGDEPMRQRILQDLRDEYQGLSHDGTGRERFYDVLLSSEGNLEFVLPHT TKGTAVEALAKHWGLSPDEVMTLGDSENDLSMLRFAGASVAMGNSKPNIKEAAHYETTDN NHQGVAKAIYSAIAYNSELNKKK >gi|292596535|gb|ADCV01000013.1| GENE 140 148455 - 148652 178 65 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0179 NR:ns ## KEGG: Vpar_0179 # Name: not_defined # Def: 4Fe-4S ferredoxin iron-sulfur binding domain protein # Organism: V.parvula # Pathway: not_defined # 1 65 1 65 70 96 90.0 3e-19 MGNLKFNIDDTCVKCGACAEDCPVQCITEGKTRFIIGKGCISCGDCYSICPVGAVKMYKR EAPKK >gi|292596535|gb|ADCV01000013.1| GENE 141 148896 - 150449 2374 517 aa, chain + ## HITS:1 COG:CAC2700_2 KEGG:ns NR:ns ## COG: CAC2700_2 COG0519 # Protein_GI_number: 15895957 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Clostridium acetobutylicum # 203 517 2 316 316 441 67.0 1e-123 MHMEEGMENKEFVIVVDFGGQYNQLIARRVRENHVYCEVYPYNKALEKIKELKPQGIIFT GGPNSVYEENSPKIEKEIFELGIPILGMCYGMQFMAHTLGGEVKSADNREFGKTPTKVDT TSPLFKGLEEDQVVWMSHVDYVAKVPEGFEIVAHTKDCPVASMQNTERKLYAMQYHAEVL HTEHGKEMLHNFLYEVCGFTGTWTMANYAKSAIEDIRKTVGDGKVLLALSGGVDSSVAAA LISKAVGDQLTCIFVDHGLMRKNEGDEVEAAFKDSGMHFIRVDAEKRFLDKLAGLEDPEA KRKAIGEEFIRVFEDEGRKIGSVDFLAQGTIYPDVIESGTGEAEVIKSHHNVGGLPAVVD FKGLIEPLRNLFKDEVRELGSELGLADYLVWRQPFPGPGLAIRVMGEITKDKLDILRDAD YIFRDEIAKAGLDRSINQYFAVLTSTRTVGVMGDFRTYDYTLALRGVTTTDFMTADWARI PYDVLDTISRRIVNEVQHINRIVYDITSKPPATIEWE >gi|292596535|gb|ADCV01000013.1| GENE 142 150757 - 152289 974 510 aa, chain + ## HITS:1 COG:XF2742 KEGG:ns NR:ns ## COG: XF2742 COG0286 # Protein_GI_number: 15839331 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Xylella fastidiosa 9a5c # 5 482 12 491 519 513 50.0 1e-145 MAAKNNTDIGFEKQIWDAACVLWGHIPAAEYRKVIVGLIFLRYISSAFERRYEELIKEGD GFENDRDAYAEENIFFVPEEARWSTIASAAHTPEIGLVIDNAMRAIEKENTTLKNVLPKN YASPDLDKRVLGEVVDLFTNEVKMDGTEASKDLLGRTYEYCIAQFASYEGTKGGEFYTPS SIVKTIVSILKPFNNCRVYDPCCGSGGMFVQSEKFVQAHSGNRGTISVYGQESNADTWKM AKMNMAIRGIDANFGPYQADTFFNDLHKTLKADFIMANPPFNLSNWGQEKLKDDVRWKYG LPPAGNANYAWIQHMIHHLGPNGKIGLVLANGALSSQSSGEGEIRRRIIEDDLIEGIVAL PTQLFYSVTIPVTLWFITKCKKQKGKTLFIDARKMGYMVDRKHRDFTEGIQEDGSLGDID LLVKTFEEFQSGMLVEKKGFSAIATIEDIAKQDYLLTPGRYVGIEEQEGDGEPFEEKMTR LTSELSDMFEKSHKLEDEIRRKLGAIGYEI >gi|292596535|gb|ADCV01000013.1| GENE 143 152279 - 153499 330 406 aa, chain + ## HITS:1 COG:jhp0414 KEGG:ns NR:ns ## COG: jhp0414 COG0732 # Protein_GI_number: 15611482 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Helicobacter pylori J99 # 209 354 4 148 409 143 47.0 6e-34 MRFEESTLYNIYSKLNGKRYPLYDLALWKNGLAFKKIHFSDTGVPVIKIAELNNGISGNT SYTKQIFSDDVHLKKEDLLFSWSGNPQTSIDIFKFQLQEGWLNQHIFKVTPNEEIVDRDY FYFLMKYLKPWFTQIASNKQTTGLGHVTIADIKRMSVLVPSLTMQKKIVDVLKPIDDKIQ INTSINNNLEQQAEALFHSLFVEDVNPIWKEGVLSDLGTVVAGGTPSKTKPEYYSRKGIA WITPKDLSLNKSKFISHGEIDISELGFSKSSAIKMPTGTVLFSSRAPIGYIAIAANEVTT NQGFKSVVPNENVGTAFMYYLLRFLLPTIEGMASGSTFKEISGAGMKSVPVVIPDNETID KFNAFCTPIFQQQEVLEAENSRLVDIRDALLPKLMAGDLDVSGIEL >gi|292596535|gb|ADCV01000013.1| GENE 144 153646 - 156786 2082 1046 aa, chain + ## HITS:1 COG:XF2739 KEGG:ns NR:ns ## COG: XF2739 COG0610 # Protein_GI_number: 15839328 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Xylella fastidiosa 9a5c # 2 1018 15 1053 1058 743 39.0 0 MLNFFREEDYEKSLIELFQNDLKYEYVYGPDIERDFYSPFYEDVLIDSLFRINHGATNDA IQDALFKLKNFENGELVQKNAIFMDYLQNGIPVRYFVDGEERSSIVYLVDYKNPENNSFV VANQWTFIENSNKRPDLILFLNGLPIVLMELKSPSREETDASEAYRQLRNYMQEIPSMFI YNAICVMSDQLISKAGTITSGEDRFMEWKTKDGNYENTQYAQFDTFFEGIFQKERLLDII KNFICFSNEGINSYKILAGYHQYFAVKKAIESTKHATVTDGKGGVFWHTQGSGKSLSMVF YAHLLQEALDSPTIVVLTDRNDLDDQLYSQFVKCKDFLRQEPLQAESRENLKTLLAGRQA NGIIFTTMQKFEESDEPLSERHNIIVMADEAHRGQYGLAEKIKITKNESGEEVAKRVIGT ARLIRNTLPNATYIGFTGTPISSKDRSTREVFGDYIDIYDMTQSVEDGATRPVYYESRVI RLNLDQATLRLIDAEYDLMSLNADSEVIEKSKHELGQMEAILGNDNTLDSLVHDILDHYE NNRAYLLTGKAMIVAYSRSIAMKIYKRILELRPNWEEKVAVVMTSGNNDPEEWRQIIGNK HYKNELAKKFKDNNSPLKIAIVVDMWLTGFDVPSLATMYIYKPMTGHNLMQAIARVNRVF RDKEGGLIVDYVGIATALKQAMNDYTSRDKKNYGDTDVSMVAYPKFLEKLSICRDIFHGY DYSKFKSGTDLERAKTISGAVNFIMDKERAEDKEVFVKESLMLHQALSLCSSLVNEDDRF EAAFFEAVRVLVLRLTNTGVGKKISLPEMNARINELLKHSIKSDGVINLFSDIKEEFSLF DPKFLQDVANMKEKNLAIELLKRLISNQVSVYRRTNVVKSEKFSEIMQRSLNAYLNGMLT NEEVIAEMLKLAKQIAADKQEGEKLGLTADELAFYDALVKPQAIKDFYENEELISITKEL ADTLRKNRTIDWQKRESARAKMRMIIKKLLKKHKYPPEGMDDAVQTVITQCELWTDNYDM EKEHKVYSYPMPTEKPLSLVADNIGK >gi|292596535|gb|ADCV01000013.1| GENE 145 157093 - 159267 892 724 aa, chain + ## HITS:1 COG:no KEGG:Pmob_0412 NR:ns ## KEGG: Pmob_0412 # Name: not_defined # Def: hypothetical protein # Organism: P.mobilis # Pathway: not_defined # 634 724 12 98 98 91 59.0 1e-16 MEKIIFEEIKNKDIFGEDYQNFVKNNEIDFSKDQIAVLYGPNGTGKTSLVKVLSSEAGTN VKYTYGDKSYTDGSQFFVINDQNNRNIIQGETKDFLLGDNIRKEFELQKYIDDEYNRLCV ASISILKNNYNISSGRSKSIECFSALASIQDIIKDFMNNKSKGSKTGVEKYISELDKYTE ITIPDFEQEKLDYVISDLSENNSLIVEIESIDACKLANNSHIKEVEENTEAIRILSRFNY KQQCIVCDSEGIDSNNLLDKKTKNIEDIKKTLDAKTKKIVEQIIHDIREEDPFRIKDIML EAIETGDLNEVLNLKASIEEYKNIFANKVIKELVEIYKSSDIKIKNEEYQTMISQKPDIT EEDFLYIEQIISSNMSKALQIIRDDKRNIKIVLENEDFIGVKREDLPLSSGEQNFLSLTF EFLKAKNSNKSIVILDDPISSFDSIYKNKIAYAIVKMLHNKKRIILTHNIDLLRLLDGQF KKCFRLYLFNNTQGEENGFISLRSDERDMLINLDELLNTFREKIFDYIRNTELFLISLIP FMRGYSTVINNLTVKERLTQLMHGYKTDTVDIAKCYIDLFGNKDDILPNSYLVNVNDILA KSFDGQEIVNKEKYPLLNRTLIHSFTYLFLRLLIEKKLVSKYNIDTESRGGAKQLGQIIS KAFPENSSNKDDIKNRVFLTTKKTLLNEFNHFEGNMSIFQPAIDITDYMLEKEKSDILTF INDL >gi|292596535|gb|ADCV01000013.1| GENE 146 159797 - 160849 490 350 aa, chain + ## HITS:1 COG:no KEGG:SCAB_21281 NR:ns ## KEGG: SCAB_21281 # Name: not_defined # Def: hypothetical protein # Organism: S.scabiei # Pathway: not_defined # 6 322 7 326 351 139 30.0 2e-31 MNKQQVRGYLLEVVLSKLIEVNGYEVITDENIGNTDEFKSCGRNGLKVKGRGGYHQFDTL GTFRVTPPFIYPLRLFVEAKFYSSDRPVGIEKVRMGVGILDDINTNYSTVNMTLSELFLA RYNYHYAIFSTSGFSNDAQRYAIAHKIHLIDLSGREYKYITDSIESIVDILMFDTNDIEK NLFKTFKRSFSHLIHTEETDEWNYKQAIECIGNRLLVQSILSLREKIKGKYIFLATINSV NMIPLFADAAFNELLKSNPHQNISIHFNRENSDEWVIVPIDNNGNEIRSLSARFTLPELF CKYMKDDLEKAMDMKEKIFAKIVFIAYLDKTNPTLCTLTFDKSTTLLNSW >gi|292596535|gb|ADCV01000013.1| GENE 147 160919 - 161119 241 66 aa, chain + ## HITS:1 COG:BH0607_2 KEGG:ns NR:ns ## COG: BH0607_2 COG0519 # Protein_GI_number: 15613170 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Bacillus halodurans # 1 66 250 315 315 108 72.0 2e-24 MGDFRTYDYTLALRGVTTTDFMTADWACIPYDVLDTISRCIVNEVQHINRIVYDITSKPP ATIEWE >gi|292596535|gb|ADCV01000013.1| GENE 148 161258 - 161674 270 138 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0186 NR:ns ## KEGG: Vpar_0186 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 136 1 136 136 222 81.0 4e-57 MNITRSFGEYFKYSLHDARVQKIEYADGNLTFTFDYIFSYENGVEQTHKAKIVFEKCDID DLEILVFNSTILDTFTGKRIELPQYQQEYSKSEFEVITETYNWGRAAFQGWLWTEGNPVH CIMNIYFTGKMVYVIDEA >gi|292596535|gb|ADCV01000013.1| GENE 149 161783 - 162292 278 169 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0188 NR:ns ## KEGG: Vpar_0188 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 169 1 169 169 298 98.0 5e-80 MKTLKEFLDSPIYLDIIEELGTDNFNKELQSIEIQELRNRLNQRQFLLEGFNCKLYSEKE LVQFFEQLIEYNRKELILWSKAFWQYSDETWEEYSDGEFPKGEELDIEDKSTILEIGKYS ITSIAMYMIEFDILKNHTEILGDYYKRMHLPGAVKYAREIKGLYKSLFG >gi|292596535|gb|ADCV01000013.1| GENE 150 162435 - 162758 231 107 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0189 NR:ns ## KEGG: Vpar_0189 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 107 1 107 107 192 90.0 4e-48 MSNLDFTICCTVTFFSKKRRIPPNLNKGMYYPHFVIKGTEEYLGINFIDGEDVIFDKPIQ ANALPVYETVDYSAIQAGTEFFIMEGGNIVGEGIVKEIFQHKPYGSK >gi|292596535|gb|ADCV01000013.1| GENE 151 162761 - 163063 286 100 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0190 NR:ns ## KEGG: Vpar_0190 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 99 1 99 100 177 93.0 1e-43 MGYKNVCVNCRISLSEGTNYELFNRNKTCPTCKGKMYLVNEKFKAPKKSNDKEWKIIEYL LLSGYDFRNPYCGYEECIYFEFPKNLQEAEAFIREMRKLK >gi|292596535|gb|ADCV01000013.1| GENE 152 163082 - 163501 417 139 aa, chain + ## HITS:1 COG:CAP0110 KEGG:ns NR:ns ## COG: CAP0110 COG0454 # Protein_GI_number: 15004813 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 132 1 132 137 170 59.0 7e-43 MAITYTEEKNFTPQQVAELFLSVRWVVGKYPDRLHKALMNSSRVITAWNGDRLIGLIRLM DDSELVCFINYVLVHPDYRGQGIAGHLLEMVKEAYKSYLYINVMIGDSKNAPFYEKHGFK IKDNSLPMQYRNVPKYTKK >gi|292596535|gb|ADCV01000013.1| GENE 153 163695 - 164177 465 160 aa, chain + ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 3 156 5 158 162 164 50.0 8e-41 MLIRKATTADLDVVTHIEATCFPPAEAAPREAFKERLKYYAGHFLIAFDGDTPIGFIDGF VSDDEILTDEMFADASLHNPNGAWQMIFGLNTMPEYRNHGVGGRLIEAFIELAREEKRKG VILTCKKEKIPYYAKFGIVNEGESESDHGGAKWYQMRKVL >gi|292596535|gb|ADCV01000013.1| GENE 154 164230 - 165138 654 302 aa, chain + ## HITS:1 COG:no KEGG:Ssed_0897 NR:ns ## KEGG: Ssed_0897 # Name: not_defined # Def: hypothetical protein # Organism: S.sediminis # Pathway: not_defined # 5 237 4 248 334 150 37.0 7e-35 MNCIKYQVFISSTYKDLIEERKQVLQVLLKADCIPAGMENFVATDDEQFNVIKNVIDLCD YYILILGRRYGSINARTGISYTEMEYNYAIERGIPVLVFSIDDSAEIDPEKIEKDPIKNG KLAEFKKRAMNNRLASVWQDMSDLIAKVAISIMRAKTEIKRPGWHRGSNDSLKTLSEKNC CLEAENTELESNFYNKLIELHFVEKVYIFTDSTRVDTDNIKVNLSELFKFVSLRLTGVKT VLAFENAISAFKPGYEVEEQDALIVKNKFEHLKLIECYVGDDNIEYIRLTNLGKSIMNKL NA >gi|292596535|gb|ADCV01000013.1| GENE 155 166038 - 167213 1418 391 aa, chain + ## HITS:1 COG:MA2153 KEGG:ns NR:ns ## COG: MA2153 COG0614 # Protein_GI_number: 20090996 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 36 390 29 377 378 267 41.0 3e-71 MVKQKRKCMAYIATVFLLIVSMLIAACGGSSETKKDTAQNNKPIEITDVTGRTVTLKKPA ERVVLQWSGAGGPFFTISALMGKDTPKVIAGMDTSLQDYRADMWKHFTAEMPELAKIPVV GTVGDKTFNVEQVISLNPDVIFIPVDLKEQYESDAKPKLDAAGVQTIYIDYHAEKLESHQ KSIEAIGKALGKEERAAEISKFYTDRVTRVLDRVSKINKPKPTVYLEVGMNGPEEFGNSF SSNYSWGALATMAGADVITKDAIKKSSPINPEFVLEKNPDIIMIMGSYWPKKPTSMRLGF EATEDSSQALLKAFTTERQGWSELKAVENKQVYSAHHGLPREVFDAAVFEYLAKTFYPEE FKDVDPEATLKEFYDKFLPFSYSGIWFMHMN >gi|292596535|gb|ADCV01000013.1| GENE 156 167315 - 168487 1511 390 aa, chain + ## HITS:1 COG:MA2153 KEGG:ns NR:ns ## COG: MA2153 COG0614 # Protein_GI_number: 20090996 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 35 389 29 377 378 267 41.0 2e-71 MVKKKKFMAYLATVLLLVVSMIMTACGGPADTKKDAAQSGKQIEITDVTGQKVTLKKPAE RVVVQLSASGGAFLTMAALQGKDVAKTIVGIDPYLSKLRTDMWDRYKSEVPELEKIPLIG NVNDKTFDVEKVISLNPDVIFMPLYFKDQYEADYKPKIDAAGIPTIYIDYHAEKLENHQK SIEAIGKALGKEERAAEINKFYTDRLTRVMDRISKINKPKPTVYIETGNEGPEGLGFAYS ANVAWGALATQVGGDLITKDVVQKAGPVNPEFILERNPDIIMIIGSYWPKKPTSMRLGFD TNEAKSQELLKAFTTERQGWPELKAVQSKNVFSTHHGLPREVYDVAVFEYLAKTFYPEEF KDVDPEGTLKEFYDKFLPFSYGGVWFMQLN >gi|292596535|gb|ADCV01000013.1| GENE 157 168504 - 169553 1143 349 aa, chain + ## HITS:1 COG:MA2149 KEGG:ns NR:ns ## COG: MA2149 COG0609 # Protein_GI_number: 20090992 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 10 348 17 355 355 302 51.0 7e-82 MTETNNQYDYKKQSYKKLMFIIIGLIICAVSFVTDIIVGPASLTLSDVWLALTDPAEVSK NAYVIIWSIRLPTAIMALLVGASLGIAGAGMQTILDNPLSSPYTLGISAGAGFGASLMVV VGASALEFLGVFMVPFGAFVFASLTSFFIYSINKIKNFSSETMILAGIGMMFLFQALQSL MQYMASPEALQNIVFWTMGSLAKANWVNISIVLIVLVIMLPLMMRESWRLTALKLGDEKA SGLGVNVESLRVKVFAFISIITAVAVSFVGTIGFIGIVGPHIARMLVGEDQRYFLPLSAV CGMAILSLASIASKMLVPGAMFPIGIVTAIIGVPFFFSLVLTRKRSYFK >gi|292596535|gb|ADCV01000013.1| GENE 158 169550 - 170329 271 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 227 245 108 29 2e-22 MIEVHNLTFGYSSTEDGQILKGVDFAAKTGKLTALIGTNGAGKSTLLKTIMGILKGKGEI SVNGKPVSQYSTKDFSSTVSYLSQDNDCKVNLSVFEVVMLGRMGSMSFRVSDEDIAATQE VLERLNLQRFASRSIMELSGGQRQLVFMAQALVKEPKILILDEPTSALDLHKQFDLLTLL KKLTQENDFTTLVTLHHLDLAAMFADEIIVLKEGTVYAQGAPKDIFTEAMMEDVYRVKTK IYMDDNGLPHVIPLEAIIN >gi|292596535|gb|ADCV01000013.1| GENE 159 170515 - 171615 1113 366 aa, chain - ## HITS:1 COG:FN0671 KEGG:ns NR:ns ## COG: FN0671 COG1108 # Protein_GI_number: 19704006 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Fusobacterium nucleatum # 1 272 1 271 280 214 50.0 2e-55 MTVHTEILLIAIAVSIACAIPGVFLVLRRMSMMADAITHTVFLGIVLAFFMTEDLNSPFL LVGATLVGVGTVWLTEMIHNTGLVNEDASIGIIFPLLFSIAIILVSLYSGNAHLDVDTAL LGEIAFAPFDRWIVNGTDLGPVSLWISLGVALINLILVMLFYKELQLSTFDPLLAGLFGF MPALIHYVLMTMVSLTVVASFQAVGAILVIGLMIGPAVIAYLWTDSVKAMLTSSIIIGII CAVIGTEVAFTMDVSIAGSIATTIGIALIIAVIATPKTGYIATYRRQRHLRRHYRETMML YHIYTHMDTPIAHVENGIGTIHEHLNWRPDYTHQAASQLKKQGLLYVTNGHYVLTDKGIA QVKEII >gi|292596535|gb|ADCV01000013.1| GENE 160 171612 - 172577 678 321 aa, chain - ## HITS:1 COG:BS_ytgC KEGG:ns NR:ns ## COG: BS_ytgC COG1108 # Protein_GI_number: 16080127 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus subtilis # 4 277 9 282 435 222 44.0 6e-58 MTILQSYTTQMVLLGTALLGLASGIAGTFAVLRKESLIGDGLSHAALPGVVIAFLLTGIK DIEVLIAGAALSSITAAWLITITVENSKIKFDGALATILSAFFGLGMVLLTYVQSLNNAG QAGLSKFIFGQAATILARDVYITSAAALIIIVLTALFWKELKLISFDVEYAKTLQIPVTF TLILYRSLLIMTIIIGIQSVGAILISSLLIAPAVGARQWTNKLGTMCILAGCFGMISAIG GTIWSTAVPKLPTGPAIIVILSILVLLSLIFAPNRGMLWQFRKNRRSKHALLLETTRAPK FKAQQSIYVAEDAQPRIGGAP >gi|292596535|gb|ADCV01000013.1| GENE 161 172574 - 173305 209 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 201 1 196 305 85 28 3e-15 MEWAVEVEDMTVAYTTKPVLWDVDMKVPIGSLAAIVGPNGAGKSTLLKAMLGLLTVISGS VKFYIDHHLAMDKNDYKKIAYVPQSGSVDWDFPTTVLDVVLMGRYGHLGWFKRPSKKDKE LALSMIEKMGMSDYVDRQIRQLSGGQQQRVFLARALVQEADIYLMDEPFKGVDKTTEHAI ISLLQEMKARGKTVIVVHHDLNTVPQYFDWVTMVNKQTVAYGPVADTFTDEAIERTYGKG RIV >gi|292596535|gb|ADCV01000013.1| GENE 162 173451 - 174392 1236 313 aa, chain - ## HITS:1 COG:TP0163 KEGG:ns NR:ns ## COG: TP0163 COG0803 # Protein_GI_number: 15639156 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Treponema pallidum # 5 312 5 306 308 304 51.0 2e-82 MKFNRILLVVVSLALIVFALAGCGKDTAQDSQKKLNVVATTTMLTDLVKEIGGDHVTVQG LMGPGVDPHLYQASAGDVTAMSKADVVVYNGIHLEGKMGSIFDNLTKQNKATIRVSDAID PSTLLDFDEEDGVKTKDPHIWFDVANWKLAAKAVYEGLAKADPAHKEDYKKRYDAYLTKL DETDAYVKAQAESIPKESRVLVTAHDAFQYFARAYGFEVKGLQGVSTATEAGTQDMNNLV QFIVDHKIKAIFVESSVPHKTIEAVQEASKAKGWNVSIGGELYSDSLGSEGTEGGTYIGM VKANIDTITKALK >gi|292596535|gb|ADCV01000013.1| GENE 163 174581 - 174676 168 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRRKRIQMKVMMVLGIVALVGPNHLQALIP >gi|292596535|gb|ADCV01000013.1| GENE 164 174856 - 175233 540 125 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0204 NR:ns ## KEGG: Vpar_0204 # Name: not_defined # Def: TonB family protein # Organism: V.parvula # Pathway: not_defined # 1 125 1 125 125 221 97.0 6e-57 MNKLFRYAAAGVLVASFGMVSDYTADAAKFLESPREVTIVKPELPEIPKTATVAPDMRVR FLIDKKGNVKNVFVERSSGYAPVDEAVKKAILQWKFTPAIGTDQKAHESIIGMTITLPKQ AVKAK >gi|292596535|gb|ADCV01000013.1| GENE 165 175244 - 175591 386 115 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0205 NR:ns ## KEGG: Vpar_0205 # Name: not_defined # Def: TonB family protein # Organism: V.parvula # Pathway: not_defined # 1 115 1 115 115 183 98.0 1e-45 MNKVLRCIILSSLFVMSMVASVLAAPYDPPVAIATPPIDRALLAAYGEAAHGADIRFTIK EDGSVGDVEVVSSSGSSALDAAIVDTISKWRFSPATDSNGKPVASSKTEYIDFKN >gi|292596535|gb|ADCV01000013.1| GENE 166 175820 - 177436 1861 538 aa, chain + ## HITS:1 COG:FN1655 KEGG:ns NR:ns ## COG: FN1655 COG2461 # Protein_GI_number: 19704976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 10 533 8 509 512 411 46.0 1e-114 MNPLKQKLDINNERYRIIVSIKEDYLDGKLSLEEGNRILKEKLGTCTPDEFAYAEQSLKG VYKDEEILEKMDDLLELFDGVLVRAENEYPENHPLWAYLEEINAVEKVALEADELLKQEK FIKNPWLGVFDSLAEWRTHLSRKQNQLYPMLEDHGFDRPTRIMWTFDDAVRDAISASYAL LREDKYEEFLASVPETLAKLRDLNSKELEVLLPTSYKLLSDEEFVRMSKNDHEIGYAIIQ APGLYVVPGINDSAAQLNGNNSAQGGAVSNEFLNDLAGLLSKYVGPVGGAPVGKDAVLDV ATGKLTLEQINLLFRHLPVDLSYVDENELVKFYSDTPHRIFPRSANVIGREVKNCHPAKS VHIVEEIVEKFRSGEQSQAEFWINKPGLFIYVIYTAVRDENGKFRGVLEMMQDCTHIREL EGSRTLLTWDKTDFVGDGGKEKSLAQEAAEEVEEEPLTTDADGRFHIDAKTTLSNLIKQC PEIVDHLISLNPKFEKLKTPMVKVMAKVATIKMMAERGDFEVDDLISKIDAFINKDKK >gi|292596535|gb|ADCV01000013.1| GENE 167 177688 - 179316 1913 542 aa, chain + ## HITS:1 COG:APE0033 KEGG:ns NR:ns ## COG: APE0033 COG1866 # Protein_GI_number: 14600399 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (ATP) # Organism: Aeropyrum pernix # 187 480 139 434 493 80 28.0 7e-15 MSTRRVWKQSEIKTNPLFSMMRSTIETAFYGNNVTPVTSVAQAYQLASEEPGVIVLDMPV FKPLEQGLPADAKVLVTNDGKTTGRYAKARRIIGDEGIDEVELANIARDAVYDSRNKEWI SAESIVGLDKKFTARAHLMIPKDHASILYSWLMNFKFFDAAVKEFYNDSVEIPEGDIYIY SDPDYVVPGHPGGLAIFDPAHNCAMILGMRYFGEHKKGTLTLAWSLANRFDYVACHGGMK RYNLEGGKSYTIGVFGLSGSGKSTLTHEKHDGRYDISILHDDAYIINTEDLSSIALEPTY FDKMQDYPVEHPANEFLLTLQNVGVTMDEDGRKVVLAEDVRNSNGRAIKSQFWTDNRVNY VGEPVNAIVWLMKDKTLPPILKISDPVLASTMGATLATRRSTAEKLDAHVDPNALVIEPY ANPFRTYPLVRDYESYKKLFSKCGVECYIMNTGFFLENKIPKEVTLDLLERLVEGTLEFK PFCEYENLSYVEVPGFEPPFEVREYHHQLHQAFEFRYDYVEKLKGHKNELPQEVLDVLKS LM >gi|292596535|gb|ADCV01000013.1| GENE 168 179548 - 180453 903 301 aa, chain + ## HITS:1 COG:BS_ycgK KEGG:ns NR:ns ## COG: BS_ycgK COG0583 # Protein_GI_number: 16077386 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 1 284 1 291 324 124 29.0 3e-28 MDIKDIKYISTIVEMASFSKASKKLYISQPALSQGIRRIEAELGVTLFVRDRTKVVPTAA ALQIAKEGMPLVLKAEALTQSIINQGTDVAYHVRIGLSQFYGHHMLGKTLKSFQQIEPSW EFHVVEGESHFLEQQICDGLVDVGLFPTPIYSQDLESYPVLDEQILLAISVENKKAIAIA DSLMTGDGIREIAPFGAFPFILLREGLKLRTLVNRLCQAECFVPKAVIGSETLDSCRSLV EDDYGITFLPSTLNSKGDDDKVKFYPLASKLCFRQLVLVARSDRAKRFHLSEVAHIMQQF L >gi|292596535|gb|ADCV01000013.1| GENE 169 180863 - 183028 2703 721 aa, chain + ## HITS:1 COG:MA3282 KEGG:ns NR:ns ## COG: MA3282 COG1151 # Protein_GI_number: 20092097 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Methanosarcina acetivorans str.C2A # 94 716 6 626 628 342 34.0 1e-93 MSKDVENKNTHEHNHGEQHGHDHNHEHHCHCGGHDHHGHDHDHQHDHDYDHGHAKALPTD KWVPHTHEPGVPHEHGVNDYMKAVAEYRKTWPTKQDVIEQTPDPAVREMILRMEQIGCDT VFDRFDKQQPQCTFGIAGICCRICFMGPCKITPKSPRGVCGADADLIVARNMTRAAAGGL TQHGAHAREILISLKAAANDQLDIPILGEEKIRTVCKAFNIPEEGRSLKEVANDLADVLL EDLSRALPGEYKTITAMAPAERREVWKNLDILPVSAYNEAFDAYHRTTVGTDGDWESNMK QFLRCGLAFTFTGVVAADIATDALFGQGGRRTSKVNIGALKKGYVNIAVHGHLPTLVSQI CTIGASEEYLEKAKAIGAKGIQFYGICCSGLSSMYRYENVIPLCNAIGAELVLGTGALDC WVADVQDVFPAIMDVARCFNTKVITTSDAARLPGAEHIGYDHHHTNLAETKDLARKILDR ALEAHELRKGMPVFIPPYEITAEVGFSPESTVKHYGSFKPLAEALKSGKVRGIVNVVGCS NPRVIYEKATVDIVDTLIKNGCIILTNGCASFPLMKLGYCNTDANKKCSPALQEFLGDDQ PPVWHVGECVDNARSSGIFGGIAAELGLNLPQLPFAMSSPEWSNEKGIDASLGFRLMGIN SYHCVEPPTQGSDAVTKWLKEDTKDILGSVMYVNTDPAKVAEKILADIDEKRAALGWAEV K >gi|292596535|gb|ADCV01000013.1| GENE 170 183198 - 183983 933 261 aa, chain - ## HITS:1 COG:ECs0400 KEGG:ns NR:ns ## COG: ECs0400 COG2220 # Protein_GI_number: 15829654 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Escherichia coli O157:H7 # 1 261 4 262 262 232 45.0 6e-61 MTQYTHIRNATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPVSMDELLN DVTAVVVTHTHLDHWDDTAVKSIPKSLPIFVQNTADKELITTQGFNDVRIIFESLEFNGI TLRKTGGSHGTVEMYANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALLRFD PNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKF IKGTNIESHVAVPEDGETITL >gi|292596535|gb|ADCV01000013.1| GENE 171 184298 - 184744 381 148 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0211 NR:ns ## KEGG: Vpar_0211 # Name: not_defined # Def: putative transcriptional regulator, TetR family # Organism: V.parvula # Pathway: not_defined # 1 148 52 199 199 278 92.0 3e-74 MEIVDDLVDDAIAYSKPGMVDNNNLQTIAKTLSAASDSVSLREAYDSIFDRLPLCQRIIR HKKYLPLFLDEQIAEYVLQRIIRREKDRQGLVMAEALGISFDVGVSVFVFLVHGLYAINK EYKWSQSDKWLEAQKIIFELVYRGLQSK >gi|292596535|gb|ADCV01000013.1| GENE 172 185187 - 185549 353 120 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0212 NR:ns ## KEGG: Vpar_0212 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 120 1 120 120 230 100.0 9e-60 MSKIFTILTLLWLLSIGGTTNATDWYYVGPDASGNQLFIDNDSVQKSDYDALLWLRVNEL GGDELRYKVYISRYNRTMETLKVDAYMSDGTPYENVEFNENPEPIAGNTNGQAIYILLWK >gi|292596535|gb|ADCV01000013.1| GENE 173 185670 - 186698 933 342 aa, chain - ## HITS:1 COG:CAC0210 KEGG:ns NR:ns ## COG: CAC0210 COG0502 # Protein_GI_number: 15893503 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 15 335 5 326 328 311 45.0 1e-84 MALPIDQQPSQVGTYEKILTIANRIMNGGEITKEEAIELIHTSDDDTMILLAMADKIRQH FNDNSVDVCAIVNARSGKCPENCKFCAQSAHHNTGVQEYPFMDEESILQAARKAKEAGAI RFSIVTSGRNTNNPDEFDQIIHVLGRIKNEIGLEICCSLGLLTYEQALKLKEVGVTRYHS NIETAPSHFPDICTTHSYEDKMFTIDNAQKAGIRVCSGGILGLNETLEQRVEMAFELKRL HIDSVPLNILNPVKGTPFESNEALRPLDILRTFAVFRFILPNALIRTAGGREVNLRDLQA YALKGGLNGIMVGGYLTTGGRSPQDDLQMIQDLELTRNTAQV >gi|292596535|gb|ADCV01000013.1| GENE 174 187021 - 188292 1025 423 aa, chain + ## HITS:1 COG:MA2363 KEGG:ns NR:ns ## COG: MA2363 COG0420 # Protein_GI_number: 20091196 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Methanosarcina acetivorans str.C2A # 6 387 24 404 443 211 33.0 3e-54 MQPFRFIHCGDLHLGAPFQYATGISNAVDRAVSEATYVALDKIIDTAITEHVHAVVIAGD IYNSEDHNLEAQVRFVRAMYRLAEHRIDVYMVQGNHDPAESWRAQLQMPDNVHIFSSEQV QRFPLIVNNIEIGGVYGISCSHGNESDNYARQYRAFERDEFSLAVMHGTVGSSVGSENHN VTGPCNLTDLTEAAMDYWALGHIHKSQVLSEEPLVVYAGNSQGLHRKEHGPKGCYLVSVS HNGHCDLRFIDTCAVRFEEIKIDIAGMQNETDFLEILRHKKENLRKQHKKNILLSLVLSG TGPLHRLCTQEEIRKLWLQESQNEEKGKSIFVMPYRIISNTRPSINLVERRLLTDVVGDY LRAYDDMVDGDAIQTARQIMADRPEFKRLGAYADLLSDELLARALKRCEIEGVTVLMGAN DEH >gi|292596535|gb|ADCV01000013.1| GENE 175 188282 - 191176 3342 964 aa, chain + ## HITS:1 COG:MA2362 KEGG:ns NR:ns ## COG: MA2362 COG4717 # Protein_GI_number: 20091195 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 600 949 946 1284 1300 106 25.0 2e-22 MNIKRIRFDEFGPYRDWSFTTGDNGVQLMYGPNESGKTSLLEGMRTLLFGGTHKAYGPMT GALDVDRNGESYYIGRKGKQLDFYSPGHPAIHEEPAQHWWHGIDKKTYNRIFALTLDDLQ GLDVLQEVEVRSRFFGAEGGEHLGGAVKDVEKGATDLLVASSNGKRRINVLMDELKENRQ KLSQLAEHEAQYVELQTVFHSTEQTEMELQNQLKEWKEYRDGIDVVLRAWDTYRRSEEAR MHMQQYNSELALSRDEFLRLDEEIKRARDNMQLWQEKEAALMPANFSPDSPFGTYGQDIE DLIQQGAKWEQLRRECEEGDAYIRKVREQLEFSRTLHSAWRHDEPMAEDINWFDGERLAS RLRTAKEQLLHWQDRKPAEATDEVPTANLEGATLPNFSEEELAKKEYLERELDRILMDID QVEARLEARRNSYGSDAQPTILPKWLQRISGIGAVIAVLVVLAGLLVLESALYTIGGFIF LILSMGLFWYATWRLHNGNSDVSKLNYELQILSSRKSDVEHQLEALIKAATPIVSPVPSL EGEAHLERWIQEGHTLQGIYDEALAAWQNWLPRGAAKSLDEDDFFGLKHEYDQYHEQLRT IEGYEKRLAEHKEGLRIIEDQAMALWYNLGIESPVSPTELKRIYNQYKNFQQNKIVWEQK EAQRKSFRNEYDNWHRKEKELLLRQKELLHKAGMESSNEYRQHLIDEDQYKQWQTIYKQS QVQLDLLAPDAENKDLFYRRLREGNKDNWLDELAHSEREIASIEDKLATLYERRGQIVEA MRTLGSDQEQHQMLQEREALQSELESALEDWATQVLISHCMDKAQQSYEQEKQPHMLELA SSYVEKLTGERYTLDILGINKGVALINNNGERLELKFWSSGLADQVYLSLRLALAKVFSY QVESLPIILDDILVRFDENRQRSALELLAELGKNQQIWLFTCQRSVYDMAQSIMGIDCHR LSRS >gi|292596535|gb|ADCV01000013.1| GENE 176 191339 - 192382 1173 347 aa, chain + ## HITS:1 COG:BS_hemE KEGG:ns NR:ns ## COG: BS_hemE COG0407 # Protein_GI_number: 16078076 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Bacillus subtilis # 2 340 8 345 353 385 55.0 1e-107 MNTAYLDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLFEITKEPELCARVTELPVK EYGVDAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSIADVDKLETFDPTKVDYIAK TITLLTSGMLDVPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDMWNALMTKLAD MSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMAMNG VGTDHLVSIWSHLPLDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAREVDR ILLDGVRYGRHIFNLGHGVFPEADPKKLHWLTDYVHERSREIWTQER >gi|292596535|gb|ADCV01000013.1| GENE 177 192387 - 193391 979 334 aa, chain + ## HITS:1 COG:BS_hemH KEGG:ns NR:ns ## COG: BS_hemH COG0276 # Protein_GI_number: 16078077 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Bacillus subtilis # 1 332 1 308 310 181 32.0 1e-45 MKVEKKGLLFLSYGSPLSKDDLVPYMTSIRRGRVPTEAEITNLTKRYDTIGQWENIELQT MAECQYKTLLTLLPTMPSAIGFLHMKPSIANAVDCLVQQGVEHIIAIVTAPFFTALGTGA YEKQVQAAISNYDNVTFDFIRSWWDQPTFKEYWVKAVSKCVNNDKSECVDSINADCVKSV KSAYVDSAKSECTVLDADGKNVFAIFSAHSIPLINNHGGDSYALALEESAKEIAEYCKLP NWTVAWQSAAPHGQWLGPTVEDAINEALQTGATRIAFVPFGFVSNHVEVLYDNDVECKEL VEAKGATYMRAPMPNCNETFLQAMASAIIERIHS >gi|292596535|gb|ADCV01000013.1| GENE 178 193388 - 195004 1868 538 aa, chain + ## HITS:1 COG:SA1650 KEGG:ns NR:ns ## COG: SA1650 COG1232 # Protein_GI_number: 15927406 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Staphylococcus aureus N315 # 2 204 4 205 466 232 53.0 2e-60 MNVTIVGGGLTGLTAAYYLGHAKPEWTITLYEQAPRFGGKIQTQRVDDFVVELGPDSYLG RKTEMTDLVHDLGLGDTLVSNETGQAFVYDKGSIHPIPGGSIMGIPTEMMPFVKATLISW PGKLRAGLDYFKKPYQLDENGDVSIGHFFKYHLGQEMMDKLIEPLLAGIYGGDIYKISLL STFPHFIQVEQKYGNMVKGMMAAKMSHSKAGVSKAAKGAVTEGDVPRAGKGTMTDRQFES HEAKTSQDTSAGNSVNGSSHVTKTSSNHQSAKAQADMESRKGTAAQSGMFRQLTGGLESV ITAIVEAMPSNVQLHTGALVSDIRYVDGVYAIDVAKSCNDSCGCQSTAEHVIISTPPATY TQWFKDDAGFDFLRSMEQSSCAIAIMSFDKSTFDGDLKGSGLLITRNTNTPLTACTILNQ KWPQTTPDDKVVLRVFIGKPGNDVVERLSEEELSELAVKEIQHIMGFSVKPEWVRINRLI HCMPQYNVGHRAGIKAVREHVAEHYPNLHLIGTPFDGIGIPDGVKQAKELVEKLVNDK >gi|292596535|gb|ADCV01000013.1| GENE 179 195234 - 195965 845 243 aa, chain + ## HITS:1 COG:SA0544 KEGG:ns NR:ns ## COG: SA0544 COG3253 # Protein_GI_number: 15926265 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 1 243 1 248 250 213 40.0 2e-55 MGKAIPTVEGWHSQHMVFAMDFSAWNCFTEDEKVAARNELKAFLADLEAKHQAKEGSYAF YDCNGAKGDLILWILGPSLEYLAQVERKFRRLAIASVLVQTYSYTSVTEVSTYVKAKLDT EEVNQKLYPHVPRDKYICFYNMSKKREGDDNWFMLPPQERGALMKAHGELGKTYLDVLSE FTTGGCGLDDWEWGITIFSNDDIQFKKIVYDMRFEVASAKYGIFSDFYVGTIIDDALLEE IFG >gi|292596535|gb|ADCV01000013.1| GENE 180 196558 - 197895 1573 445 aa, chain - ## HITS:1 COG:PA3876 KEGG:ns NR:ns ## COG: PA3876 COG2223 # Protein_GI_number: 15599071 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Pseudomonas aeruginosa # 1 441 1 464 468 311 39.0 2e-84 MNELKMPQVGASRSEIVANWQPENPEFWEKFGKKIAKQNLVISTIALTLSFCVWYLWATI AAQLNSAGFNFTTDQLFTLAALPGLVGATLRFVYTYMPALLGGKNWTFISTIILLVPVVW LGFAVQDTTTSYATFMILTALIGLAGANFSSSMAYIGNFFPKSEKGTALGINGGVGNLGI SVIYFLAPFAMGSAALGSVFGVTPTIIKGNAVYLANAAFMWVVPLVVILALMTRFMDNLP LEKPNPKNLVQIFGNKHTWALTLLYTCSFGAFSGYAAALGLLVGKEFPEIPFASIAFVGP LVAGALRPVGGWLADKINSGTKVTFISLIGLCASTALIAVGVDMHNFPFFFAMSVLTFVC CGFATGATFRMIPHVFGNPLLSSLITGFVAAVAAYGAFITPKIFGFVYSMFGNIHPAFAV LLAFNLVTVAVCYWFYVRKGANMNV >gi|292596535|gb|ADCV01000013.1| GENE 181 198215 - 198940 450 241 aa, chain + ## HITS:1 COG:BH0231 KEGG:ns NR:ns ## COG: BH0231 COG0664 # Protein_GI_number: 15612794 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Bacillus halodurans # 34 241 32 237 237 166 44.0 4e-41 MDFVIKVLWSDNGMDQKLINQLLALPGEELHLKKGDFLFREGDKAEYFYVVVKGRMSIKK FEASGHIFALRLVGPNNVIGEVPLYEENTRTYVFNAIAREDCSVYCIRYDVLEGAIAKDH SLAIAMMKIYTLHMRRQQAKYRDLLLYGKKGAFYSTLLRLANSYGVKREDGIFIDIALTN QELAEFAATSRESLNRMLSELRKLGYVAYDKHHLVICDFDALIGLLDLEVDGIDPNISNI E >gi|292596535|gb|ADCV01000013.1| GENE 182 199012 - 202689 4520 1225 aa, chain + ## HITS:1 COG:BS_narG KEGG:ns NR:ns ## COG: BS_narG COG5013 # Protein_GI_number: 16080781 # Func_class: C Energy production and conversion # Function: Nitrate reductase alpha subunit # Organism: Bacillus subtilis # 2 1225 7 1228 1228 1538 59.0 0 MSLLSQKFKFLRKKEVSPSGHQITEDGGREWENFYRDRWSYDKVVRTTHGVNCTGSCSWN IYVKNGVVAWENQATDYPETPDDMPDYEPRGCPRGATFSWYLYSPLRVKYPYVRGELAEL WREAKKNAKNPIEAWKSIVEDPEKAKKYKSARGMGGFVRSTWDEATEITAASLLYTAKTY GPDRNAGFSVIPAMSMLSYASGARFLNLMGGSPLSFYDWYADLPPSSPQVWGEQTDTPES GDWYNAGYIMTWGSNVPLTRTPDAHFLTEVRYKGTKVVSVSPDYAESTTSSDAWLNVKAG TDAALAMAMGHVILKEYYIDKETPYFKEYAKEFTDMPFLVRVEDINGTVQPGRFLNAKDL GRQEEGSDFQMVLIDDTTNEIVVPNGTMGDRHTNPEKWNLRLENRDTGAKIDPRLSVFDQ REEVTVVKLPYFGDEEHEGVIERAIPTITVQTADGPVKVTTVYDLILANYGIDRGIGGEV AKAYTDDTPYTPTWQEKITGVKAEIAIATAREFADNAEKTKGRSMIIMGGGINHWYHADI IYRTILNLIMFCGTEGVNGGGWAHYVGQEKLRPIEGWGGIMTANDWSKAPRLQNSTSWFY FATEQYRSDCIDLADRVSKLAKPRYRHPGDYNVLAARLGWLPSYPTFNKGSQELINDARA AGAGTEAEINQYVAQALKNKELQFCVEDPAAKENHPRNLFVWRANLIGSSSKGHEYFLKH LLGTKNAVLEDDDAATRPEEIKWREADGAGKLDLLIDIDFRMASTGLYSDIVFPAATWYE KEDLSSTDMHPYVHVFQAAVDCAWETKSDWDTFRTLAETVSRVAKESGFTEYEDIVALPL GHDSPGEVAQPEGKVLDWSKGECEPIPGKTMPNLVHVKRDYSQIFEKYIALGPNIENKMG AHGLAWDVSDEYQTLYAQNGTIDNPDFISHGRPSIYECKEACNAVLTLSSCTNGKLAVRS WKAMEEKTGLSGLEKNAKGREQEKITFDDMVRQPRFIISSVTSTGKNDKNRRYSPFTTST EDKVPFRTVTGRQSFYCDHEMMRDYGEAMALYKPVLAYKPVQGDYKQKGIPEITLKYLTP HNKWSTHSMYFDSQQMLTLFRGGQTIWLNEDDAAEIGVKDNDWVEAFNKNGVVAARAVVS PRIPRGISYMHHSQDRHINVPGTQVKKDRRGGTHNAPTHIYMKPTHMIGGYGQLSYGFNY YGPTGNQRDMTIVARKLKEVDWLED >gi|292596535|gb|ADCV01000013.1| GENE 183 202679 - 204112 1543 477 aa, chain + ## HITS:1 COG:BS_narH KEGG:ns NR:ns ## COG: BS_narH COG1140 # Protein_GI_number: 16080780 # Func_class: C Energy production and conversion # Function: Nitrate reductase beta subunit # Organism: Bacillus subtilis # 1 449 1 459 487 626 60.0 1e-179 MKIKAQVSMVLNLDKCLGCHTCSITCKNTWTNREGAEYMYFNNVETRPGVGYPRNWENQE KWKGGWTLDKSGNLALSTGSKGSRLMKLFYHPEQPEITDYFEPWTYDYETLIHTGRKNNQ PVARPRSLLTKQKMEVTWGPNWDDDLAGGHHAREDVNLAKMGDDIVFDYEEVFMRYLPRL CNHCLNPACVAACPSGAIYKRDEDGVVLVSQDVCRGWRHCVPSCPYKKIFYNWETNKAEK CVFCYPRLENGLPQICAETCVGRMRYVGVVLYDMDKVQEMAATKDEQEIYQNTVDLILDP NDPEVIKAAREAGISEAFLKAAKKSPVYKLVKEWGVALPLHPEYRTLPMVWYVPPLSPIL QRVTSDVYLPDAHEMRVPVQYLANMFTAGNTDILARVLQRILDMREYMRRRETGDEAIAH EVDLTEEQMYAMYKLLALSKYNDRFVIPSDVNVSREGRLEMQHNRGFACPTGGCHNG >gi|292596535|gb|ADCV01000013.1| GENE 184 204105 - 204629 556 174 aa, chain + ## HITS:1 COG:BS_narJ KEGG:ns NR:ns ## COG: BS_narJ COG2180 # Protein_GI_number: 16080779 # Func_class: C Energy production and conversion # Function: Nitrate reductase delta subunit # Organism: Bacillus subtilis # 12 164 14 167 184 76 34.0 3e-14 MDDAQKIALIASFLLRYPDESWYNELGEWKEDTYSVEHPQLRQGLLEFFDYIEETDRKAF EDQYVRIFDFSRNTTMYLSTYELQGTGEQAEELVKYKAFFLENGYDLPKEMPDYIPAILE LCAVIEPEKAREVYDYCKPKLEYIRDRLIEAKLTYAFLFDIILSVANGLEDGAR >gi|292596535|gb|ADCV01000013.1| GENE 185 204626 - 205297 914 223 aa, chain + ## HITS:1 COG:BS_narI KEGG:ns NR:ns ## COG: BS_narI COG2181 # Protein_GI_number: 16080778 # Func_class: C Energy production and conversion # Function: Nitrate reductase gamma subunit # Organism: Bacillus subtilis # 5 220 6 222 223 197 48.0 2e-50 MNLFLWGALPYIAFTFLIVGTLVRFFYFERNWTTKSSEFLEKKQLRIANPLFHFGLLCVI GGHVVGVLVPKTWTAAMGINDHMYHEGALYMGAVAGIIFIVGFLLLMKRRFTVPAMKVNT SGFDKWLYLFLTLAIFSGMAGTLLNASGFFDYRVSIGPWFRSLLSFMPDPSLMEGVPFMF KFHMLAWMVVAIIFPFSRLVHCLSVPLNYLTRPFIVYRKRDQK >gi|292596535|gb|ADCV01000013.1| GENE 186 205375 - 205503 105 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282849307|ref|ZP_06258692.1| ## NR: gi|282849307|ref|ZP_06258692.1| hypothetical protein HMPREF1035_0257 [Veillonella parvula ATCC 17745] # 1 42 1 42 42 65 95.0 1e-09 MLTTMRGFLFTDSVLVDYNVFPVEKKFIHCNKLRMTIIGILI >gi|292596535|gb|ADCV01000013.1| GENE 187 205622 - 206224 790 200 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0226 NR:ns ## KEGG: Vpar_0226 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 200 1 200 200 365 99.0 1e-100 MNQVETKQKKSIYHIFVWIAIFSLVMIGLLEWGYMAGGRAFGNYKVYTGLVPWCVWIIMT YLATRPKWFTSRYNLGDMYKVHRALGIATVAVIAFHLYLYFGKAAKSILGWWGGYVALTS FGIATISGLAFLTPKLRKVTPSGRNVGIWLHRLNLVALVAADIHIHGFNRISKMVPFLQV FDIITYGLVLYCIYLMFKKK >gi|292596535|gb|ADCV01000013.1| GENE 188 206476 - 207747 1880 423 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0227 NR:ns ## KEGG: Vpar_0227 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 423 1 423 423 715 92.0 0 MIKRKMTSAFAVAAMMGVATAFAVNPFSDVPSDSWAYQAVDQLATAGIINGYPDGTFKGQ NNITRYEMAQMIAKGMANQDRANAEQQAMLNRLADEFSNELNTLGVRVAKLEDRVGNVKV TGDARINYIGKEGGDGYDYEDKITARVRLGLDAKVNKNTSVKARITSGSIELGDSSKEAQ ANWDLAYVEHKFGKNVVVDAGRYTQKFGGGLIYSSNFDGVGATAKLGDKVTLNGAYGYMT AGRFAKTSKADNGDVGLINANVAVNDRFGFGGMFAHVGTTNVRMGNGKKNNEFDNIYGFN AKYNIGKFGIDGEWVKASGLSDSDIWNVGVKWGDYKINKKNSWTIRLDYFDQAKNAPVFK TQKYESNDLLKKTRYEGYKAWQLGASYAPEKNIGINAYYGFNAKTQEGNRVNDYYRADLN FKF >gi|292596535|gb|ADCV01000013.1| GENE 189 207867 - 208472 698 201 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0228 NR:ns ## KEGG: Vpar_0228 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 201 1 201 201 333 98.0 2e-90 MAEVVKKQFKSKYHILIWIAVLSLIFMGMVEYGYVTGGRPFGNWKVHLGLIPYVAWLVLT YIATKPKWFIKRYNPKEMFEIHRIVGIVSVVLVCAHWYVYFLKALKSFLGFWGGYISLVA MFIALIFAVLYLTPWVGNMAKSVSRRKAIWIHRLNLVAIIAANIHVHGFGRLSKMVPFLP VFDVVTYALVIYYIYWMFKQK >gi|292596535|gb|ADCV01000013.1| GENE 190 208764 - 209969 971 401 aa, chain + ## HITS:1 COG:BH2592 KEGG:ns NR:ns ## COG: BH2592 COG0477 # Protein_GI_number: 15615155 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 5 399 4 395 409 156 28.0 8e-38 MDSSWKRIIYLICTIQVGGGITIIGVLSFLPLFLAELGLHDPGEAAMWAGLVSGVTPCMV ALSAPYWSRKANQLGPRKVMMFILFTLMVTVGACAFTQTPWQLLMLRILQGVVGGYVPIG LAIIILVTPENKVPWAMGLYQASMVMGLVFGPLMGGLVADLLGYRAPFVMFSALTGLCML GIYLFMPNLQFEHKVDARESQLSLIKSFLVIPRVRLLVGLLFLCNFGITGIGPILPLYIK HYMHMNDEFVATIVGIIIFGAGLFSALASISIGKITERLTMPRIVFTATWAVGTLFILQY IMPSIWGLGIFRAIAGFFMGFITPIANTLISKAVPIERRGIVFGAVSSVAMMGNVLGPVL SGMIARAFGYGAVFWSTAAIFFVAALFIYRSLVIPSESQSA >gi|292596535|gb|ADCV01000013.1| GENE 191 210144 - 211028 973 294 aa, chain + ## HITS:1 COG:CAC2690 KEGG:ns NR:ns ## COG: CAC2690 COG0583 # Protein_GI_number: 15895948 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 163 1 164 271 97 35.0 4e-20 MLLKQLEYFVCVVDNNSFTQAATEQYVSQSAISQQIKALENSLGVELMVREKRSFHLTPA GQYLYRSGKKLLERFHDIKVETTRIGTDARVSLRIGYLNRYSGIAMQQTVIHMAKRYKNL DIRMYSGSHEELYGMLSDRRVDVVFNDQWQILSDDFESHLIDKSTTFIEVPQGYTNEDCV ELKHIDDLPLILLCRGKYTLSEEEHYRKAIGYNGAFAYARTLEEARYLVAGQQGLLLLDC FKYLTDPMPGIERKVLTNHGKPMERHYYFISQRNQNNSYIVALRDMFRQVLEEL >gi|292596535|gb|ADCV01000013.1| GENE 192 211169 - 211783 534 204 aa, chain - ## HITS:1 COG:FN1861 KEGG:ns NR:ns ## COG: FN1861 COG1279 # Protein_GI_number: 19705166 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Fusobacterium nucleatum # 3 204 4 206 207 138 39.0 7e-33 MYFLQGLLVGLATFAPVGMQNLFIINTALVQPVRRIILTLIILAFFDMSLSAAAFYGIGA VLEMWPLTKLIVLLFGGLLIVYMGFNIFKTEPDMRNVDTHIPIRKIIVSAIAVSWGNPQA ILDATMMLGAFQANIPKESIYHFFTGFLVMTPIWFGSLATTMHLLAKKIKITHMAWINRF CGSVLVIYGIKLCIDGFMMLRDFL >gi|292596535|gb|ADCV01000013.1| GENE 193 211785 - 211850 74 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEGFRATIHLISTLSYHSQEG >gi|292596535|gb|ADCV01000013.1| GENE 194 211919 - 212959 1016 346 aa, chain - ## HITS:1 COG:SPy1056 KEGG:ns NR:ns ## COG: SPy1056 COG2855 # Protein_GI_number: 15675048 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 22 346 22 339 339 321 57.0 1e-87 MGINPKTLPGILLCAILAIPCWLLGQQFHLVGSPIFAIILGIIIGSIFTSWKREKTGAGI GFTSKKILQWAVILLGFGLNITQILHVGWISLPVIISTIATSLIVSYVIYRLTHIDSNSA VLIGVGSSICGGSAIAAAAPVIKAEDHDIAQAISVVFFFNVVAAFVFPQLGDAIGLSNMG FGLFAGTAVNDTSSVTATAAVWDSMKGTGTQVLEYATIVKLTRTLAIIPICLGLASYQVY KAKKNASQTDGANVSIAKIFPRFVLYFVLCSLITTALSYANVDIQFLSIFKTISKYFITM AMVAIGLNTNIVKLLKSGGSALALGACCWIAISAVSLMAQHMIGLW >gi|292596535|gb|ADCV01000013.1| GENE 195 213307 - 213852 673 181 aa, chain + ## HITS:1 COG:BS_yvdA KEGG:ns NR:ns ## COG: BS_yvdA COG0288 # Protein_GI_number: 16080520 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Bacillus subtilis # 1 176 4 181 197 138 35.0 7e-33 MIDITKIIETNKEYVKQHPELPKARLTSHPTKKLGIVTCMDTRLVGMLEEALGFNRGEII VIKTAGNSVTQPIDNIVQSLLVATYGMEIEDVLIIGHENCGMIDFSATTFMESMKAKGIS EDAIRMIEPGLIDWMDRFHISEDNVIYTVNFLRHHPLFPKGMGFYGGMMDPDTGEFRYIE I >gi|292596535|gb|ADCV01000013.1| GENE 196 214406 - 215158 1041 250 aa, chain + ## HITS:1 COG:BH0783 KEGG:ns NR:ns ## COG: BH0783 COG0132 # Protein_GI_number: 15613346 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Bacillus halodurans # 8 229 9 216 242 105 33.0 8e-23 MKQLGISIIGTDTDVGKTFVTGLLGAMAVDDGFAVGMVKPVSSSAVPFPECVTMDEDNYN IGLESKDATHLMRSAGIPESRRHEVNPYAIAGDFSPRLAAELAGIEIDYDGLVEHTLDVV SRYDITFVEGAGGITTPLYGDKTFTDFMKDIKLPAIVVADGRLGSINRAVLTCEYAKLHG IEVKAIIVNDTTAVDLFLLKTNVADMERYAGVPVVAVVPPYQGPDIHKVQLGWARSFIDS KELWNTVLGL >gi|292596535|gb|ADCV01000013.1| GENE 197 215360 - 216748 1665 462 aa, chain + ## HITS:1 COG:aq_170 KEGG:ns NR:ns ## COG: aq_170 COG0161 # Protein_GI_number: 15605740 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Aquifex aeolicus # 11 450 11 452 453 464 52.0 1e-130 MAEKQLSQAAQWDHEFVWHPFTQMQDWLAQEPVVIERGEGVYLIDENGKKYYDGVSSLWV NIHGHNHPVLNQALKDQTDKIAHSTLLGLVSPPSAQLCKELVELAPKGLDKVFLSDDGST AIEVAIKMAYQYRQQVGQTKKTKFIALNAGYHGDTLGTVSVGGIQLFHQVFHNLLFKPLT LPSPGVYRDLADRDKAFEESLTELERILNEEGDEITALVMEPLVQAAAGMLVMPHGYLKR VRELTEQHDVFLIVDEVATGFGRTGKFFACEHEGVSPDFMTLSKGITGGYLPLAATLTTQ RVFDAFLGTFEEKKTFYHGHSYTGNALACAVALASLKVFRDEKVIEQLPAKVEAFTKALE PIKSLKHVKEVRQRGLIVGIELEKDVSTHEAYRPNDAVGAKVAILAREQGLICRPIGDVV ILMPPLASTVEQLEDMVRIVGESIQRATEEEGILEDMRPIIL >gi|292596535|gb|ADCV01000013.1| GENE 198 216936 - 218276 1629 446 aa, chain + ## HITS:1 COG:HP0724 KEGG:ns NR:ns ## COG: HP0724 COG2704 # Protein_GI_number: 15645345 # Func_class: R General function prediction only # Function: Anaerobic C4-dicarboxylate transporter # Organism: Helicobacter pylori 26695 # 8 446 7 443 443 459 63.0 1e-129 MDIYVIMQVIILFGAIFLGVRLGGMGIGYAGGLGVVLLSLGMGMFPGQIPWDVILIIMSA IAAICALQLAGGLDYLVRIAESILRKNPKHINYLAPTVTYFLTILAGTGHTAFSMIPVIV EVAKSENIKPSVPLSIAVVASQIGITASPVSAAVVAMSGFLEPYGVNYPTLLAICISTTF VGVMITAFIMSTFANNDLSSDPVYQERLAAGHVAPPREKSTDFHLKPGAKTSVLIFLIGI ICIVFYATAISKNIGIIKPVIFGRNDAIIGFMMIIAAAITFFCKLDTAELVNTSTFKSGL SACVCVLGVAWLGDTFVKGHIPEIKALASSMVTAYPFLLAVAFFFASTLLYSQAATTQAL VPAVILALGITPENTGSVYIIIASFAAVSALFVLPTYPTLLGAVQMDDTGSTRIGKLVFN HPFFIPGVLAIAISVALGFLVAPLML >gi|292596535|gb|ADCV01000013.1| GENE 199 218358 - 218768 350 136 aa, chain - ## HITS:1 COG:Cgl2228 KEGG:ns NR:ns ## COG: Cgl2228 COG0735 # Protein_GI_number: 19553478 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Corynebacterium glutamicum # 9 134 15 142 144 74 33.0 5e-14 MNTTTWPEGIKKTKQREAIWSVLTTTDKPITAMEIAERLGDGSTTWMSTIYRTLELLETK DIVTRTTLMGSDMAYYEITPHTHRHYAVCTSCGAMIPLHTCPVVEMPKELSKAGFTVTEH HLEIAGICRNCKDKNK >gi|292596535|gb|ADCV01000013.1| GENE 200 218999 - 219817 849 272 aa, chain - ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 249 4 252 268 206 50.0 3e-53 MFSYDFMQNAFFVAICISLLCPCIGIFMVLRRSSMIGDTMSHASLAGITLGLLTNTNPIL GAFIFTAICGALIEFLRKYFSHHLDLILTIILSLSIGTAITLISSGKLKANANVFFFGSI LTVNATDMISIAVLTILSVLTLYFLYNSLLYIAYDEEAARVAGVKVDFINYIFAILMAAA VSISIKIVGVLVLSAMIALPVASALQLEKGFKITLLCSIGFSLLAMIIGLFGSYFLNVAP GGFVSLTSVGILLVVLVIKNIRTIIRRFQFSR >gi|292596535|gb|ADCV01000013.1| GENE 201 219810 - 220601 1003 263 aa, chain - ## HITS:1 COG:CAC2877 KEGG:ns NR:ns ## COG: CAC2877 COG1121 # Protein_GI_number: 15896131 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Clostridium acetobutylicum # 1 204 1 205 220 205 53.0 7e-53 MLSIEHLYFSYQGQPPYVLNDLNLHIHSGDYISIVGDNGCGKSTLLRLILGFLTPVKGSI KRSTNNIRYVSQKNDFSHAGFPITVKEILDSYRKLLKIKDKQEVNRVLELTHMTEFKDRL ISKLSGGQAQRVSIARALIGKPDLIILDEPSTGIDRKSQEGIYALLRNLNQEHHITIISV EHNIEMALANSTNIYHIANGQGHLCSPEQYASEIMHSTGRNPIDHKNCSCFTDVTIEAQA QAQAQAQAQAQADDTTVEEVRHV >gi|292596535|gb|ADCV01000013.1| GENE 202 220749 - 221663 1362 304 aa, chain + ## HITS:1 COG:CAC1593 KEGG:ns NR:ns ## COG: CAC1593 COG0803 # Protein_GI_number: 15894871 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Clostridium acetobutylicum # 1 304 1 298 298 304 50.0 2e-82 MIKKLILLVVGIMMAALFAGCGNDAPNAQKEQAGKKIQVVTSFNAMAEFTKAIGGDKVEV STIIPDGVEPHDFELKPENMKQLATAQVFVYNGFGMEPWAKQAIEAAKNDKLVSVVATEG VEAIKNTDPEEIKEHGAEDPHAWLSLKNAKIEVKNIKDALVKVDPANKDYYEKNYTEYVA KLDAMIKKYEEQFAKAPHKNFVTGHAAFAYLCRDFGLEQNSVEDVFAEGEPNAAQLAKLI EYAKENHITTIFAEEMASPEVSKTLAQEVGAKVETIYTIESNEDNKTYLERMDENLTKIA ASLQ >gi|292596535|gb|ADCV01000013.1| GENE 203 222015 - 222686 504 223 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0242 NR:ns ## KEGG: Vpar_0242 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 223 1 223 223 310 92.0 3e-83 METKWYSDIWQLIVAPFKRGIPQIVEHGSCRKGFYATVALALTSFVFSNILPAFLSMIFV DKLNVALTGAAALSGVGLLGLAVGLLFAFIGIAIYSAIFSWVANKFDANTTYESVLKIMW YEQAYNQIMGLVYFIGFLLLSLPFLLLLGSHPDSTVGSIVWITIIIFATIAFAVYTFWVC LTLLSRQINKSRLATFGISIITSLIPVIILGVLIGMVVLATSR >gi|292596535|gb|ADCV01000013.1| GENE 204 222925 - 223608 291 227 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0243 NR:ns ## KEGG: Vpar_0243 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 227 1 227 227 371 96.0 1e-101 MMVGLMQFIYRLLNPIEENNPRMYHFDIAYGQLIGMLLLTLICYQFTIVGEGVYLDAIRA FIRNSSLLVRWESLSLPVGQHEIQLFLEQMGSPREFWNMGRFAWVIGKVIFMACIIIVYA VAQQRKFYVRTVTTGILHIMSFAQLVVALITFTAGIMLILTSVPLILQAIIGFCMIVLCV LSTVLLLQTMGRIVGACINGTPYEGLILMLIALLLVHVFEWIYMLTR >gi|292596535|gb|ADCV01000013.1| GENE 205 223681 - 224310 438 209 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0244 NR:ns ## KEGG: Vpar_0244 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 209 1 187 187 248 82.0 8e-65 MTWYKDILHLFTKLSEQSFQNIINYGAHTRAILNLVVSTIVLYIMTYSLPFMVKVISPML GIKRITGLTHFDVISILASSVFLIFQIIIGSFVIWRLLVLLGGRGTYGGVLRNYIYGLAY TNALRTVVLVLIHILGIIFFSLSLQKYVGDMAYLITMFSQYYAVFIVAQLMRRYVELGII KTYIVIFIVALLSVSVLPQWIRFVHTLFK >gi|292596535|gb|ADCV01000013.1| GENE 206 224365 - 225276 770 303 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0245 NR:ns ## KEGG: Vpar_0245 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 301 1 301 302 539 92.0 1e-152 MISIYPTIYHEFQCKADQCENTCCQLWTIDIDEPTAERYHSMTGSLGESLRQAITVDDEG SHFIFSKAQPMCPLLNEKGLCKVVLELGEEGLCDTCHMHPRFYKYIEDLELCGVGLSCEA SVELLAQQEPMDLLLFTIEDDHNEFNSKERLTLHNIFELLAFDLDPNLFQYAPNPTKQSF KELLDLYKKTEPIDENWTAQVNTLSSKLDQLTASVQTYIQQEDMSLFNKVYQYILYRQID MLSDYSLESILAYAKDGTDYILIASALEGQPLKQIARWSQQIEYDEDNVALLLQHYEAQL IIE >gi|292596535|gb|ADCV01000013.1| GENE 207 225437 - 226000 671 187 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0246 NR:ns ## KEGG: Vpar_0246 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 187 1 187 187 362 100.0 5e-99 MRSFFVKGSLVLALAAAFGMPNASAAPLVAVEPTVAVVDGNHAAIVGANGLLNAFIQNHP NAGITEIAFDADGGQIKYDVEGFDETGKYELTYIYATNQIFEKREGDFHKSLKKKSFDPR EILPPAAVVNFAYAQTKGKAVSLNEWAVRYDKGKIVYKVSFGTEDNKEVHVRMDAMNGKL LSVKFDD >gi|292596535|gb|ADCV01000013.1| GENE 208 226516 - 227136 834 206 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0247 NR:ns ## KEGG: Vpar_0247 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 206 1 206 206 177 95.0 1e-43 MKKSILKSSIALAVAGVFGATVAVTAAEPVTPMPVTQETASTATPAQPVTDPVVPTVAVA PDVDTTAVAPKTPVAPVAEANQVGTAVRNTTPVPTATQDVKTPVAQETVVPSTENPAAAV PSIETASVAKAPSEPRVVRSGDKKSDSVAKHGKEVKNTKKAAVDKAPKVKVVKDEKKADK EEPTKEEKKTLKVENHNLAQPTSKKA >gi|292596535|gb|ADCV01000013.1| GENE 209 227295 - 227573 307 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282849283|ref|ZP_06258668.1| ## NR: gi|282849283|ref|ZP_06258668.1| hypothetical protein HMPREF1035_0233 [Veillonella parvula ATCC 17745] # 1 92 1 92 92 150 100.0 3e-35 MTLDVATGNVTDGTPKAYDASMEASAIDAGTVIPPHVAINAAFVQSGKVATGINAWSLAN QNGKSLYTIEFHDAQNKPISVVLDAKTGTVAK >gi|292596535|gb|ADCV01000013.1| GENE 210 227588 - 227785 122 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFIYPIQRAVCNCLLCVLFIVCVVYCVVFLCVLCVVYVCVSVLMLCVYSFECLVFVFERV YFTAL >gi|292596535|gb|ADCV01000013.1| GENE 211 227994 - 229106 1389 370 aa, chain - ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 1 370 5 374 386 251 37.0 1e-66 MRPTYLTINTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESLAV AIPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLESLNKVADNHDMI IRVAVAVDTGMHRIGIKPEDAIEFIKRIESYENLEIDGFFSHMSNADAADQSHAHSQTQK FHRMVDEIRAFRPEADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLGLK PVLSFHSEVVHVQHIPAGEGIGYGSTYITTEPMTIATIPVGYADGYPRSLSNRGTVLIHG TRCPVVGRICMDQFMVSVPDTITVKPGDKVVLLGSQGHESISALEIAALASTIPYEIFCG FSERVPRQYI >gi|292596535|gb|ADCV01000013.1| GENE 212 229466 - 230416 1040 316 aa, chain + ## HITS:1 COG:CAC2945 KEGG:ns NR:ns ## COG: CAC2945 COG1052 # Protein_GI_number: 15896198 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 27 316 26 323 324 223 42.0 3e-58 MSERVVVVNASKMNYDHALDFSILSNDVQVYDNSTNTELIERIQGARVVVTKEISVTAEL LSQFPDTVKLIVEAGTGYNNIDLNAAKAKGITVCNIPAYSTERVAHTVIMMILNFASTMQ QQIGMLAKGDRSNFTKYLQVSHTEVNGKTLGVVGAGHIGMEVIKVAKALGMNILVHTRTP KADGDGIRYVSLDELLENSDYITLHCPLNDQTKHFINKETIGKMKPNAVIVNTGRGPLIN EADLCKALAAKRIAGAGLDVQEVEPPVEDSPLYTLDNVIITPHMSWKGLETRQRLVGIIR DNVQAFFKGEPINVVS >gi|292596535|gb|ADCV01000013.1| GENE 213 230652 - 231044 438 130 aa, chain + ## HITS:1 COG:PA3689 KEGG:ns NR:ns ## COG: PA3689 COG0789 # Protein_GI_number: 15598885 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 4 129 2 127 156 80 34.0 9e-16 MIYRISEFADKCGVNKETIRYYERKNLLQEPHRTEAGYRIYSYDDVKRVGFIKRIQELGF SLSEIYKLLGVVDKDEVRCQDMFEFVSKKQKEVQKQIEDLKRIETMLDDLKQRCPDEKQL HSCPIIETLT >gi|292596535|gb|ADCV01000013.1| GENE 214 231073 - 232713 625 546 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 85 538 4 456 458 245 31 2e-63 MNKFKVNISGMTCTGCEKHVESALEKIGAKNIESSYRRGEAVFELPDDIEVESAIKAIDE ANYQAGEIEEVSSLENVALINEDNYDLLIIGSGAAAFSSAIKAIEYGAKVGMIERGTVGG TCVNIGCVPSKTLLRAGEINHLSKDNPFIGLQTSAGEVDLASLITQKDKLVSELRNQKYM DLIDEYNFDLIKGEAKFVDASTVEVNGAKLSAKRFLIATGASPSLPQISGLEKMDYLTST TLLELKKIPKRLTVIGSGYIGMELGQLFHHLGSEITLMQRSERLLKEYDPEISESVEKAL IEQGINLVKGATFERVEQSGEIKRVYVTVNGSREVIESDQLLVATGRKPNTDSLNLSAAG VETGKNNEILINDFGQTSNEKIYAAGDVTLGPQFVYVAAYEGGIITDNAIGGLNKKIDLS VVPAVTFTNPTVATVGLTEEQAKEKGYDVKTSVLPLDAVPRAIVNRETTGVFKLVADAET LKVLGVHIVSENAGDVIYAASLAVKFGLTIEDLTETLAPYLTMAEGLKLVALTFDKDISK LSCCAG >gi|292596535|gb|ADCV01000013.1| GENE 215 232873 - 233139 194 88 aa, chain + ## HITS:1 COG:no KEGG:SAG1253 NR:ns ## KEGG: SAG1253 # Name: not_defined # Def: ISL3 family transposase # Organism: S.agalactiae # Pathway: not_defined # 1 81 1 81 435 164 95.0 1e-39 MSDLLSLPDIKTIEPPQKNETDMTFKVEAVGPPERCPECGFDKLYKHSSRNQLIMDLPIR LKRVGLQLNRRRYKCRKCGSTFWERLYL >gi|292596535|gb|ADCV01000013.1| GENE 216 233103 - 233603 195 166 aa, chain + ## HITS:1 COG:FN0599 KEGG:ns NR:ns ## COG: FN0599 COG3464 # Protein_GI_number: 19703934 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 8 166 110 266 428 66 29.0 3e-11 MRIYLLGTPISVDEKRSMTKRLLKSIQEQSMSKTFVEVAESVGVDEKTIRNVFKDYVALK EREYQFETPKWLGIDEIHIIRRPRLVLTNIERRTIYDIKPNRNKETVIQRLSEISDRTYI EYVTMDMWKPYKDAVNTILPHAKVVVDKFHVVRMANQALEITSESL >gi|292596535|gb|ADCV01000013.1| GENE 217 233639 - 234196 265 185 aa, chain + ## HITS:1 COG:no KEGG:SAG1253 NR:ns ## KEGG: SAG1253 # Name: not_defined # Def: ISL3 family transposase # Organism: S.agalactiae # Pathway: not_defined # 1 185 251 435 435 370 100.0 1e-101 MRERFILLKRKHDLNERESFLLDTWLGNLPALKEAYELKEEFYWIWDTPDPDEGHLRYSQ WRHRCMSSNSKDAYKDLVRAVDNWHVEIFNYFDKRLTNAYTESINSIIRQVERMGRGYSF DALRAKILFNEKLHKKRKPRFNSSAFNKAMLYDTFNWYEVNDHDITDNLGVDFSTLIKNL EKGDL >gi|292596535|gb|ADCV01000013.1| GENE 218 234230 - 234793 395 187 aa, chain - ## HITS:1 COG:SP1858 KEGG:ns NR:ns ## COG: SP1858 COG1309 # Protein_GI_number: 15901686 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 185 4 176 178 105 32.0 4e-23 MDRRQKRTRKAIFIAFNDLLSNKAYDKITVQEIISAADIGRTTFYAHFDTKEALLEALCE DLFLHIKDSINHLPHAHGLYQQSVYPVSVFGHLLQHLQQNENKILELLASDNNEIFLRYF RDHLNELVQGYFINQDRKANTNLPDDFIINHISGSFVEMVLWWVKNGMKESPTKLDNYFH AVIEPII >gi|292596535|gb|ADCV01000013.1| GENE 219 234994 - 236889 1559 631 aa, chain + ## HITS:1 COG:MA3632 KEGG:ns NR:ns ## COG: MA3632 COG2217 # Protein_GI_number: 20092432 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanosarcina acetivorans str.C2A # 117 625 133 640 647 374 39.0 1e-103 MVHRIHDILSGLYMTILAGLFLLLDGIPHLIEEFGGQSPFQNIFPFEPSWVTVIICGFPL VYLSIRKIVYNKGISKISSALLISMAMFAAVAIGDIFAAGEVAFIMALGALLEESTTERA KKGLKKLISLAPVKGRKIQDNKEIMISIESIQSGDYLRILPGETIPVDGRIIKGETTVDQ SIMTGESIPVDKTIDDDVFGGTINCFGAIDIIATKVGEDSSIQKMIQLIRNAEQKQAPIQ RIADTVASRLVPIALMIACIGYLVTGNIIVGVTVLVVFCPCALVLATPTAVMAAIGQATK HGVIIKSGEILETMGKVDTMAFDKTGTLTRGQLSVQSILVVDTDYSEVDILQLAASAEAK SEHPIGKAIVSHAIHQDLEILDTTSFTMSVGRGVIAIINGVTLYCGHERFLEEHNIIVDE RVQQNVNTYRSEGKVSIIIADKDHIIGIITLSDTMRRDTADMLSAISSLAIKTVLLTGDS KETATYIGKKAGISEIHAELLPGEKVSIIEELQGKHHKVCMVGDGINDAPAMKTSDVSIA MGSIGSDIAIETADIALMSEDLSKIPYIKRLSDATIRTIKFSIALSMAINCIAIILSLLE VLTPTTGALVHNVGSCLVVLIAARLYDRKFI >gi|292596535|gb|ADCV01000013.1| GENE 220 237009 - 237785 539 258 aa, chain - ## HITS:1 COG:SPy0379 KEGG:ns NR:ns ## COG: SPy0379 COG1180 # Protein_GI_number: 15674526 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Streptococcus pyogenes M1 GAS # 1 228 9 239 263 241 47.0 1e-63 MTGRIHSVETMGTVDGPGMRMVVFLQGCPMRCAYCHNPDTWDETSDNAKFMTVKELWDQY ERNRQFYTNGGITVTGGEALMQIDFVIELFTYFRERNVHTCLDTSGICFDPHQEVAYRKL LSVTSLVILDIKEIDPAKHLWLTGKPLEPILGFARLTADVEVPIWVRHVVVPTITDNADR HYRLGFFLGSLKNLQAVDCLPYHVMGTAKYKELGIPYRLEGIPAATKDIAAKATRTVVEG IKAYRRHWWSPIKTQHQS >gi|292596535|gb|ADCV01000013.1| GENE 221 237798 - 238034 443 78 aa, chain - ## HITS:1 COG:lin1443 KEGG:ns NR:ns ## COG: lin1443 COG1882 # Protein_GI_number: 16800511 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Listeria innocua # 5 78 670 743 743 111 68.0 4e-25 MSNQQVDNLVELLDGYSQKGGHHLNVNVFTRETLLDAQKHPELYPQLTIRVSGYAVHFNK LTKQQQDEVISRTFHQRI >gi|292596535|gb|ADCV01000013.1| GENE 222 238110 - 240227 2811 705 aa, chain - ## HITS:1 COG:SA0218 KEGG:ns NR:ns ## COG: SA0218 COG1882 # Protein_GI_number: 15925929 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Staphylococcus aureus N315 # 4 668 10 674 749 968 67.0 0 MQHTAWKDFNTGVWDKAVDVRDFIQRNYIPYEGDDSFLAGPTERTTKLWEQVMKLYEEER EKGGMLDADTSVATHITAHAPGYIDKERETIVGLQTDKPLKRAMFPYGGLRTAKSAIEEY GFKMDPQTEDFFKKHRKTHNDGVFDVYTPEMRAARTAHIVTGLPDAYSRGRIIGDYRRIA LYGVDYLIEDKKEQFSITMGDMLEDVIRDREEIQDQIRSLKELKEMAASYGYDISKPAKD VREAMQWIYFGYLGAIKEQNGAAMSIGRNSTFLDIYAERDLRNGTYTEEQIQEFVDHFIM KLRMVRFARIHEYNNLFTGDPVWTTESIGGMGTDGRTLVSKMSFRYLHTLTNLGPAPEPN LTVLWSPRMPIGFRRFCAKLSIETSSIQYENDELMRPNSGDDYAIACCVSPMRIGKEMQF FGARSNLAKCLLYAINGGVDEKLKKQIGPKYRPITSEYLEFDEVWEKFDDMMEWLAGVYV NALNIIHYMHDKYAYEKLEMALHDRKVTRWFATGIAGLSVVADSLSAIKYAKVKPIRDEN GIAVDFEIEGDFPKYGNDDDRVDSLAAKVVSTFMNKIRKHPTYRQSVPTMSLLTITSNVV YGTATGSTPDGRKAGEAFAPGANPMHGRDSHGAVSSLASVAKMPWRDCSDGISNTFSIIP DALGKSGETFVSVSDFDIELDPSQLPNSNTNFACSEPNVTIKEDK >gi|292596535|gb|ADCV01000013.1| GENE 223 240581 - 241075 195 164 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0256 NR:ns ## KEGG: Vpar_0256 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 164 58 221 290 280 96.0 1e-74 MDELLSEEAVKPRYPYESIVEYDIDEIKHFDIKLDSVNHVKMRAGEGEKIKVQLVSDTIE NLTELVKVKIDDIKRRIDVDVNRSKSLSEKLVKEHLSIFINLPEKYMGDTELATHCEKLE LFDIISEKFELDGAAKEIYIAGGNSHIELDNNSPMEIYVADYTG >gi|292596535|gb|ADCV01000013.1| GENE 224 241082 - 241273 58 63 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0256 NR:ns ## KEGG: Vpar_0256 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 63 225 287 290 113 95.0 2e-24 MNQISAKSRLHVPHEYAFKAVKKGIRTKLFFENRGHLVDDFSVSESENQIEINGINSELT IVK >gi|292596535|gb|ADCV01000013.1| GENE 225 241292 - 241375 56 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGPTKCVTKSLEQVITLYENYVADMSM >gi|292596535|gb|ADCV01000013.1| GENE 226 241602 - 242264 576 220 aa, chain + ## HITS:1 COG:DR0512 KEGG:ns NR:ns ## COG: DR0512 COG0697 # Protein_GI_number: 15805539 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Deinococcus radiodurans # 14 218 26 229 301 73 29.0 2e-13 MTNRKKALLGASATIAVWATAFPFSKIALQSVDSLTLSVARVMGGALLMLVIGVVKGLHI PTTWREWGLYILLGATGNFLYQVVFNEGLRTIPAATSSIIMALTPMTTALMAMIVYKDKI RPIGWVFTITAFIGVAIIILWNSALTIPVGALWTLLGMILFAVYNILNRGLSLKGYKPIT IAMWSMFTGAIMALPFAEHALEMIVVSPISAKFAMAYLVR >gi|292596535|gb|ADCV01000013.1| GENE 227 242288 - 242455 81 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|282849275|ref|ZP_06258660.1| ## NR: gi|282849275|ref|ZP_06258660.1| putative membrane protein [Veillonella parvula ATCC 17745] # 1 55 234 288 288 99 94.0 9e-20 MEHAEKVSDVTNFMYISPIVAAIVAAFLLGEIPNMGLYIGAPIILGSLYLFNQYR >gi|292596535|gb|ADCV01000013.1| GENE 228 242714 - 243736 1052 340 aa, chain + ## HITS:1 COG:lin0312 KEGG:ns NR:ns ## COG: lin0312 COG1135 # Protein_GI_number: 16799389 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Listeria innocua # 1 332 1 329 338 317 50.0 2e-86 MIAIRNVTKEFDVNKQKVTALSDVNFTIEKGDIFGIIGFSGAGKSTLLRMINALEVPTSG HVEIDGVNINGLSFNELRKVRKRIGMVFQQFNLLNAKSVYDNVAIPLILNKVSKSEIDNK VKTLLDFVDLGDKANAYPGELSGGQKQRVGIARALATDPSILLCDEATSALDPDTTESIL QLLERVNRELGVTVVIVTHEIDVIQKICNRVVVMEHGKLIERGSVLEVFSKPKHETTKRF VRTVIPDEIPSTVKHTLACDKRPYTILKMHFLGNNTTDNVLYHINKTFDLETSVLFATVT ELEHTVLGIFIVQFIGDDLEVGKVKEYLVAQGIEWQEVTL >gi|292596535|gb|ADCV01000013.1| GENE 229 243736 - 244407 896 223 aa, chain + ## HITS:1 COG:SA0421 KEGG:ns NR:ns ## COG: SA0421 COG2011 # Protein_GI_number: 15926140 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Staphylococcus aureus N315 # 13 222 9 218 219 173 57.0 3e-43 MDFFMQELGVPGSQLVLAAEQTLYMVFLSLFIGTVLGLIIAVTLVVTNPNGIIKNSVVYT ITNTIVNIVRSVPFIILMVFILPLTKMIVGTRVGTTAAIVPLVIFIAPYLARLFENSILE VNKGIIEAAQSMGASHFEVIWHFLLPEAKGSLILSITTGTIGLIGATAMAGAIGAGGVGD LALTYGYERLNFPLMLFTVVILIIFVQIIQTIGNYFARRARRS >gi|292596535|gb|ADCV01000013.1| GENE 230 244462 - 245286 1199 274 aa, chain + ## HITS:1 COG:NMA0506 KEGG:ns NR:ns ## COG: NMA0506 COG1464 # Protein_GI_number: 15793505 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Neisseria meningitidis Z2491 # 33 266 42 274 287 159 35.0 4e-39 MKFKKFLALGMALVFSVAFIAGCGSNNSDNGAKKELTYSKSQGPYSELFEKGVKPILEKQ GYTFKGVDMSDLVQADQVLSDGEVDFNVEQHIAYMKNFNEKQNGHLVALTPIPTVPAGIF SGSKTSLDQVADGDTIAVPNDASNMARAYALLQKIGWIKLDPNKDLATVTQADIIENPKH LKFTEMKSLTIPSVRTDFDYIVITGAIIYNAKIDPKSALANEDVLPQWLLQLVVNEKNKE AQWAKDIVAAYHSQEFKDYMEKNNNGLWFVPKGE >gi|292596535|gb|ADCV01000013.1| GENE 231 245421 - 247244 178 607 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 382 579 25 219 309 73 28 1e-11 MSPLRRFLIDSKSQWGWLALLILALITAAMFEVSAPVLLGKVVDAIISGLQTNQDINTIF ASIDTIILWLIAIYGGHALFTYFGEYMMASIGSKTVLALRTRMSTHLYSLPIEYFHDHQR GDLLSRLTSDLDAVAETIGEGVPGLVSAIIGIIGATAMMLWISPILGTSIIVIILIGIIC LTWLSKRARRVYLRNQNALGAFNSGIEEIVVGKPIIQTFGLEETTTRQVNILNDNLFKSM RSATFTSQLVEPLVKFLNQFTYCLVAIQGGLMVLRGSISIGDIQAFFLYVGQVSAPLSRS SYIMTKFQETAAALGRIYEVIDVPSEIDDGKLTLSNSSSKTDRDAISTNTSMTANQPSNQ AHTGTIDFEHVDFGYTPSNVFMKDINIHIPAGSMVAIVGPTGAGKSTLVNLIMRFYDIKN GRITIDDVDIRDLSRESLHNTVGMVLQDAWIFTGTIADNIGYGKPNATREEIEYVARLAM ADHFIRTLPNGYDTMLNRGGDDLSQGQRQLITIARAFLADPNILILDEATANVDTRTEVE VQKAMNTLLKGRTSIVIAHRLSTIKNADFLLVVENGTIVEQGTHDELMALNGYYKKLYEN YAVGMTV >gi|292596535|gb|ADCV01000013.1| GENE 232 247241 - 249076 191 611 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 364 596 1 229 245 78 26 4e-13 MKLISSYIKPLWFSIIIVSLLSLLNVAGTLYIPTLTATIINDGVLHGDLEMITNSSATML IVALLTVSSAILGVAMSAHISASIGKVLRDNLVKAIQAFSLRDFTHFGTGTILMRTSRDV EKIQSVLGEGLNMILPMPLMICIGLGLTFYKSWQLGLVILAVMAFMILTIIFIESRALPI IKALQLKLDTITDMVRDHIVGMPVIRAFNRRHYENTKEIEIFTETAQLNKRLRQTFAIGL PTILILFNMSTVAILWLGGYNVSIGSLQIGDIMAVIEYANLILLSMLMAIFVIIDIPEAI VCYTRIQELLEHENSDTFPEPYNKNTNLNTHYIVGQEDSRKFVDLASASASASASASAND DTPLLEFRNVTFRYDNAESPALENISFTVHHGETLAIMGDIGSGKSTITNLIPRLFSIES GDILFKGKSIYEWNVDDLRSRIGYVPQKAYLFTGTVEMNIRYGAAPNQNISVQDIENACR LSKADEFISRLEGGYQYIVSQGGTNLSGGQRQRLAMARALVRKPDLFIFDDSFSALDGTT ERAVRTVLHEELQKDNRPALISVEQKVSAAKKADHILIINRGQVAGYGTHDELAENSTVY KQILASQEVTE >gi|292596535|gb|ADCV01000013.1| GENE 233 249287 - 250753 2021 488 aa, chain + ## HITS:1 COG:jhp0131 KEGG:ns NR:ns ## COG: jhp0131 COG0471 # Protein_GI_number: 15611201 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Helicobacter pylori J99 # 7 483 8 477 482 404 48.0 1e-112 MKLNWKLFAPLVVAILVWLIGAPEGLSPNSWIYVSIFAGLVVGLILEPIPPAFIGIIAVT VSMLFKVGPAPIVDKATGVAKAITDAQAISWGLSGFSNAIVWLIFAAFMIGIGYENSGLG RRIALFLVAKLGKSSLGLGYAIAITDLVLAPFIPSNAARSGGTIYPIVSSICPMFDSYPD KNPRKIGSYLNWVALATTCVSSSIFLTGAAPNPLALELSAKSGIVAANWGTWFLAFLPVG IILFIITPLLTYVFCKPEVKGSPEIAAWAKDEYKKLGSMTRSEIFMALISVLALVLWIGA STFKINPTTTALIVIILMIFTKIMTWQDFLANKPAWNVLTWFATLVPMASGLKNVGFLEW LAKSAGGSLVSLDPTMAVLGLLLAFCLLRYFFASGTAYVTAMVGLFATLILQIPGVDPAQ VMLILLVPMGIMGILTPYGTGHSPIWFASGYNKGPEFWKLGAIFGIIYLAIFIVVGIPWI QFVMPLLG >gi|292596535|gb|ADCV01000013.1| GENE 234 251145 - 251549 424 134 aa, chain + ## HITS:1 COG:YPO2978 KEGG:ns NR:ns ## COG: YPO2978 COG4125 # Protein_GI_number: 16123159 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 2 134 24 158 175 77 37.0 7e-15 MSATERVVQSILYEVGCVMIGWSVMQFVPHEGQPLALMVIFSLLAMVWNFVFNWIFDKLV PGDRLARGPVIRTVHAVLFEGLFMLATVPIIMYMMHMSFWMAFVTDITMTLVILGYTYVY NWVYDRARLLFVEA >gi|292596535|gb|ADCV01000013.1| GENE 235 251609 - 252112 573 167 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0265 NR:ns ## KEGG: Vpar_0265 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 166 1 166 167 249 98.0 2e-65 MSTKSITGTGLLLAVALLAQSLRLMFPFIPNQVSMFLIGSITSATFVLATWRYGWKNGLV IAWIAPVVAHLQGMLPLPPFILITALGTTAYVFVAHWLQHKPKALLIIVAALVKAGVLFG GYSLFFSLFQFPPKIVNTMLFVSSWPQLVTSSLGIILALLITKRTKY >gi|292596535|gb|ADCV01000013.1| GENE 236 252265 - 253398 1665 377 aa, chain + ## HITS:1 COG:CAC0390 KEGG:ns NR:ns ## COG: CAC0390 COG0626 # Protein_GI_number: 15893681 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Clostridium acetobutylicum # 3 375 9 382 384 438 56.0 1e-123 MKFNTKCVHGSGKPDSTGAISPAIYMSSTFSHPKLGDTTGYQYSRESNPTRDRLEQLIAG LEEGTDALAFSSGMAAVDAVFHLFSPGDHIILGDDLYGGSIRMFTNIYEQNGIEFTYVGT SDLDAVKAAFKPNTKAVYIETPTNPMMEITDIRALCALAHERNALVIIDNTFLSPYFQKP LTLGADIVVHSGTKFIGGHHDVISGFTIVKDEEIAAKLRLTYKTVGACLSAMDSWLVIRG VKTLALRMEQHQKNAIALAEWLKKQPKVTKVLFPGLPEHPGYEINKAQTTGFGGMLSFEV DSEETAKQVLEGIKLIQFAESLGGTESLLTYPVTQTHPDLKPEDAERKGITRRLLRLSVG IEDTEDLIADLEQAFNK >gi|292596535|gb|ADCV01000013.1| GENE 237 253409 - 254593 1224 394 aa, chain + ## HITS:1 COG:YPO3006 KEGG:ns NR:ns ## COG: YPO3006 COG1168 # Protein_GI_number: 16123185 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Yersinia pestis # 4 382 3 382 393 371 44.0 1e-102 MGQYNFDQILDRTHTKSLKYDFAVKRGKPADVLPFWVADMDFEIPPELKQILLDRVNHGV FGYTESDDEYFDVLKNWFTTRFNWTPEQKWLVKTPGIVFSLAMAVRAFTKEGEGVLINQP VYYPFSMVIDDNNRRLINVPLIKGEEKYTIDFEGIERAIIEENITLFLLCNPHNPVGRVW TEDELKRLGDICIKHNVLIVSDEIHADFVWKGHTHKVFADLGESYAEHCIVCTAPSKTFN IAGLQVSNIFIPNDSLRRRFIKEIDRAGYSQLNTMGIVGCEGAYKVGAPWLDELKEYIQD NIQFTIDYVAKYMPKIHAYRPEGTYLMWLDCSQLPLSPKERDEWIINDAKLWLDTGSMFG VDGEDFERINVACPRKVLEEGLEAWRRAYEAKGF >gi|292596535|gb|ADCV01000013.1| GENE 238 254655 - 255614 1129 319 aa, chain + ## HITS:1 COG:CAC1825 KEGG:ns NR:ns ## COG: CAC1825 COG1897 # Protein_GI_number: 15895101 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Clostridium acetobutylicum # 1 299 1 299 301 368 59.0 1e-102 MPIKVIKNLPAITKLAQENIFVMDTERAENQQIRPLQILLVNLMPTKEVTETQILRALSN SPLQVNLTLLHTASRKAKNTDEQYLETFYRTFDEVKDQFFDGMIITGAPVELMPFEEVDY WSELVEIMNWGEEHVYSTFYICWGAQAGLYHHFGINKSIMDEKLFGVYEHDIYNDRPVLM RGFDEKFWMPHSRHTTVSLQQIKENRDLELLAGSEPTGAAIVRSLDNKHIFVFGHAEYDW DTLNREYVRDIKKGMDIAVPENYFPDNDPKQRPIVRWRSVSTLLFTNWLNYYVYQETPYI IEQIQKMKFERDKNLGAYI >gi|292596535|gb|ADCV01000013.1| GENE 239 255904 - 257175 1926 423 aa, chain + ## HITS:1 COG:CAC2783 KEGG:ns NR:ns ## COG: CAC2783 COG2873 # Protein_GI_number: 15896038 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Clostridium acetobutylicum # 3 423 5 427 427 536 63.0 1e-152 MSKQYRFETLQLHAGHTVDPTGSRAVPIYQTTSFVFKDAEEAAGRFALTNPGGIYSRLGN PTTDVLDARVAELEGGAAGIAVASGSAAVTYSILNVADAGDNIVAASTLYGGTYNLFTAT LPRLGIQTKFVNPDHLEEFEAAIDEKTKAVYIESIGNPGINLIDVQAIADIAHKHNIILI VDNTFASPYLFRPLEHGADVVVHSATKYLGGHGTTLAGVVVESGKFDYKGSGKYPGFSEG DEHYNGLVFGDLPIPFTVKIRAQLLRDTGACITPLAAWQILQGIETLSLRVERHVENARK VVDFLSKHPKVAWVSYPELEDSKYKALADKYFPKGVGAVFTFGVKGGKEAGIKLVDSLEI FSNLANVADAKSLVIHPASTTHAQLNEEQQKSAGVTPDMIRVSIGLENIDDIIEDLAQAL DKA >gi|292596535|gb|ADCV01000013.1| GENE 240 257657 - 258244 866 195 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0270 NR:ns ## KEGG: Vpar_0270 # Name: not_defined # Def: propeptide PepSY amd peptidase M4 # Organism: V.parvula # Pathway: not_defined # 1 195 1 195 195 335 97.0 4e-91 MKNVKKVSKVLCAFGVSTVLLAGVVGAASNHGYNNHSNWNGVGSVAPSAQANYSVDYMGA VTVFQQQFPGATVKSISYDAKHNPYYEVEGYYGNREVELKVDEASGQIVGKEVKGYSKAS KTINVQNIIIPEVAETKAMEKVGSDFQTMDWTVERENGRVVYEFDMTTGGGKNAEVKVDA TSGKVISAKVKNTKY >gi|292596535|gb|ADCV01000013.1| GENE 241 258639 - 259205 644 188 aa, chain + ## HITS:1 COG:CAC1360 KEGG:ns NR:ns ## COG: CAC1360 COG1268 # Protein_GI_number: 15894639 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 16 168 1 153 179 120 46.0 2e-27 MSSTVSKQTRITTRQLTMTALFVALIAVGAFIRVPLPNCPFTLQILFTTLAGIVLGSRLG AASVGIYIVLGLVGVPIFTSGGGPSYILQPTFGYLIGFMVGAYAVGRIAETMDTLSFKRL LAGSILNLFIVYGLGMVYLYFIMNLYLGKPIGVEAVIITCFLIPVGPDIFLCAVAASLGK RIIKELQH >gi|292596535|gb|ADCV01000013.1| GENE 242 259392 - 260156 844 254 aa, chain - ## HITS:1 COG:CAC1591 KEGG:ns NR:ns ## COG: CAC1591 COG3689 # Protein_GI_number: 15894869 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 116 248 97 229 245 70 31.0 3e-12 MTLGLKDRFSIVKGLLYLILGICCIYLIVTGRYLNYIAPRYELLLGISGVALILGGLATI IWAPSKYYKHNWKSIVPIIIPIMLLIVPPVLVPSTGVHGATRVNDDTNNFDFTNDAIGEV VTVNSESKEPGISKDKKEIVLNSDNFYQTIVKVGSNADQYKDYTVYMTGYVNREDNTLKS NEFTISRMAMACCIADVAPIGMTAYKTDGDSLQNEQWVSIEGKVSTRDFHGRKQPYVEIT KIKSAEPILGYVYP >gi|292596535|gb|ADCV01000013.1| GENE 243 260215 - 261750 846 511 aa, chain - ## HITS:1 COG:BH1518 KEGG:ns NR:ns ## COG: BH1518 COG0701 # Protein_GI_number: 15614081 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 220 510 47 337 337 140 30.0 4e-33 MIPVYIVTGFIGSGKSTFINEQLQYRKKLGGTAIISAEEGSEPLIKEPLQLNADELSAIV PSDIKSYELIACKIGDYLKRLQPKELWIEWNGMVSFHQLEALLYSDILSHLLQVEKVLYI CTDQFVSTILPGLGNDVMSQLYSADCIITESNTHHALLRTYNGEAKIITAPTPEKVEQLC RNSTWGLIPNLLVIGITTYILLVTAFRHDIPYSIHQCFAIITGLIIEAIPFLLLGTVGST IIRYFVPQRVLLKLLGDHSLKSYGAAMVSGFALPICDCAIIPLFKALIDRGIPLSVALLF MLASPIINPITILSTWYAFPDNPMLSVWRIVLGLGVALLVALSFRFWPPATSILKARTPQ NLSYEEIVLETTKTKHIDKKRLLVHMEREFSQLLFYFSMAATVLSIVQVYGKPWLLNAGL TLPEFTAIPILLMLAFFFSICSTSDAIIGKSLSTLFPISSVMGFLILGPMLDIKNVYILK QYMPTSFIIRLSITIAVMSYIAALVFKFFLS >gi|292596535|gb|ADCV01000013.1| GENE 244 261747 - 262616 703 289 aa, chain - ## HITS:1 COG:BH0366 KEGG:ns NR:ns ## COG: BH0366 COG0523 # Protein_GI_number: 15612929 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Bacillus halodurans # 2 248 6 263 311 102 26.0 1e-21 MIPIVIISGFLGSGKTTFLQHILKEHTSKDKILIIENDFGETSLDAANLAKTGATVREVT SGCICCSLQGNFQQALLDILQNYKIDMIYIEPSGVSKLSEIIHTCNDEDIAKSAYIHASI TTVDAMQAPMFIKNFGLFFKDQITHSDAIFLSHTEDIQQTSITKRMIRDLAPHTPIHEEA WDTIGLRDYIKRLYHCHDDHCLHDEHLFMSHTFKDLRTLSLAQWKTILEGMPDTVLRAKG IVPTTEGPHELQYGTHYCSLSPSETNDYSLVVIGTDFNVPMVHNEVCQS >gi|292596535|gb|ADCV01000013.1| GENE 245 263041 - 264510 1754 489 aa, chain - ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 12 489 8 486 486 353 39.0 5e-97 MRMKGTIMETIVQAKRVLEIFKEMSQIPRESGNEKGISDYIVNFAKNLGLEVHQDEIFNV VIKKAASPGYENRPSIILQGHIDMVCVKDHDSNHDFSKDPIANIIEGEWMHADHTTLGAD NGMGAAMMLALLEDENQQHGPMQLLFTTNEETGMDGAFAIKEGQVTGDYLLNLDTEVEHD FTVSCAGGCHVHVKIPLLRENNLPGYDAGLSITVTGLKGGHSGIEINEQRANANQVLTRV LYDIQQQYPISLASFEGGVKHNAIPSKAVAVLSVRSEDVAAIKTLLAYQEKQYQHEYSVQ DPGLTFVVEDVPTPEIVYAEDTTEALITYIYLAQDGVHSVSKSIPNLVETSNNIAIVREN QHTIEILISIRSSNSNSLEFLTKKMMLLAKALGVAAERTGGYPAWEYDKGSKLEEQAISL HNEMFDTPANVNAIHAGLECGLLKGVLPNTQMISFGPTIVSPHTPSERVHLPSVENVYVY LKALLAKLQ >gi|292596535|gb|ADCV01000013.1| GENE 246 264791 - 266242 1579 483 aa, chain + ## HITS:1 COG:CAC1780 KEGG:ns NR:ns ## COG: CAC1780 COG1488 # Protein_GI_number: 15895056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 4 483 11 489 489 562 56.0 1e-160 MQHESRNISMLMDFYEMTMAHGYFTKLKNVDRVAFDVFFRRNPDKGGFAIFGGLEQIVEY ILNLHFDESDISYLRSQGIFSEEFLEYLKDFSFTGDVYAFPEGSIIYPNEPVITIVAPLI DAQIIETAVLTMMNHQSLIATKANRIVRAADGRIVADFGARRAHNVDAAVYGARAAYIGG VQSTATVLAGQQFGIPVSGTMAHSWVMYYGSEYDAFKAYAEVYPDNAVFLVDTYDVLNSG VPNAIKVAKDVLEPMGKRLKGIRLDSGDLAYLAKKARRMLDDAGLEDCKIMASNSLDEYT ITSLLIQGGPIDIFGVGERLITSKSDPVFGAVYKIASIEKDGMWEPRIKISESVEKITNP GLKKVYRVYNDKGRAIADLLTLLREVPDTEEPYRYIDPEQPWRELYFENCTFKEMKQLII KDGKLVVDLPTLEEIRAYVQDQLANEIWPEEQRFENPHRHYLDMSPSYYQLKMDLLNRIY RKK >gi|292596535|gb|ADCV01000013.1| GENE 247 266251 - 267018 906 255 aa, chain + ## HITS:1 COG:PH0182 KEGG:ns NR:ns ## COG: PH0182 COG0171 # Protein_GI_number: 14590117 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Pyrococcus horikoshii # 10 252 7 251 257 126 34.0 5e-29 MLENPQVTKDALIQWIRDYFGKNGPNCSAVVGISGGKDSTIVAALCKEALGADRVVGVLM PNGVQSDIDDAQAVVNHLGIPHMTVNIGAAYEALTHAIVQAKGYDVVTGRTDLSKDAAIN TPPRLRMATLYAVGQNLPNGARVANTCNGSEDYVGYSTKYGDSAGDFSPLAQLVVEEVRQ IGKLLDIPLHLVDKVPSDGLSGQSDEDKLGFTYAILDRYIRTGEIEDQPTKERIDYLNRI NKHKLELMPSFDPKL >gi|292596535|gb|ADCV01000013.1| GENE 248 267205 - 268182 956 325 aa, chain + ## HITS:1 COG:STM3598 KEGG:ns NR:ns ## COG: STM3598 COG0252 # Protein_GI_number: 16766884 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Salmonella typhimurium LT2 # 5 325 27 347 347 243 44.0 5e-64 MDTKIALIGTGGTIAGKGTSNTDLTGYTAGVLGLDKILASVPGTKPYGPYTYTQFSNIES SDITVNHWLELSKLVQKLVNRDDIGGVVITHGTDSMEETAYFLNLTVHTDKPIVITGSMR PAGAISADGPINLLQAIQVARTPSSVGKGVIVVLNGYIDGARDVSKCNTTNVATFDSPLV GHLGIVQDGVAHYYKVSTRRHTQDSVFDVSKLSELPRVVIMTCYGGMDDMVPMSVVATNP DGLILTGLGHGTIPQNVRQITQNTKFPTVRASRTGSGMVSAVPQDALANYLVCDTLSPQK ARILLMLGLTKTKNLKKLQQFFHEY >gi|292596535|gb|ADCV01000013.1| GENE 249 268265 - 268426 80 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIPQKLLFNTPLIYEKYNTNEKPHILGDRNVRFIAYKTVTYSIIFENEYQIKI >gi|292596535|gb|ADCV01000013.1| GENE 250 268458 - 269234 709 258 aa, chain - ## HITS:1 COG:MJ1613 KEGG:ns NR:ns ## COG: MJ1613 COG1865 # Protein_GI_number: 15669809 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanococcus jannaschii # 73 251 73 247 255 68 35.0 8e-12 MFKNLYEAPQELATGGYVTRELHSVTVHFDDIHYSLSSGQLNGGYHHTLAVRNQQLTYQI ETEKDLPGGSVADYLAQEFEHIDTPVHFSTALLTSATMHLHAYAKVEEHDTIVETIVTAG YEKTAHRAGTGYCYEERDGDFIVPGTINILVFTNKALTDSAMVKAVMTITEAKTAALQDW NVESVRLHPFINEDIPDAITKERKTSATGTSTDGIILTIDTNGDILTDAGSFSLFGDTLA KAVYVGVQRALENAIGAE >gi|292596535|gb|ADCV01000013.1| GENE 251 269410 - 270339 827 309 aa, chain + ## HITS:1 COG:VC0480 KEGG:ns NR:ns ## COG: VC0480 COG0668 # Protein_GI_number: 15640507 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Vibrio cholerae # 5 283 16 287 287 169 31.0 6e-42 MANFLSAVSEFLFKDANILIQIRDWFFAQAGNILLALILFWIGRYAIKWVKAFAVRIMTK ASYDSAAMSFITQIINYALLVGLVLICLNQIGIPTTSFIAAFGAFGLGIGLALQNNLSNL ASGLLILIFKPFRAGHVIQVGDVVGSVKSIQFMYTVITTKDQKNVYIPNSLLTSQAVTNI VYTTERVIPFTFDIGYNNDHHEAIKILKNIFAADKRVLNPKNMEIGISEFGDNSVRIAAY ARVKSNDFLDVQYSIMSDVKDAFDKYGIDIPYPQRVVYIQNVDTSTGEIKGTKKKATTTN VALDDSLES >gi|292596535|gb|ADCV01000013.1| GENE 252 270392 - 271222 856 276 aa, chain + ## HITS:1 COG:CAC2057 KEGG:ns NR:ns ## COG: CAC2057 COG1686 # Protein_GI_number: 15895327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 3 268 4 260 351 161 39.0 1e-39 MFYKKLVLAITFIGIIFIGASVAQAAYITPPSTVGEAVVLIDADTKEILFAKNPDKWMHP ASTTKMVTLLTALELKGTQLDELATISSYATSMEESNLGVRVGDQITLEGVLEGMMVASG NDAAVVVAENVSGSVDKFAKDMTRIAAKAGAKNSVFLNPHGLTQKGHHSTARDLAMIAAY GMKYQMFRDKVANDYYKVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIAS ATRNGHTMIVVMLNDDNRWDEAVQFLDYGFKLRGVI >gi|292596535|gb|ADCV01000013.1| GENE 253 271278 - 271838 513 186 aa, chain + ## HITS:1 COG:yfbR KEGG:ns NR:ns ## COG: yfbR COG1896 # Protein_GI_number: 16130226 # Func_class: R General function prediction only # Function: Predicted hydrolases of HD superfamily # Organism: Escherichia coli K12 # 1 181 13 194 199 179 46.0 2e-45 MRFINRWSLMRNTEIENIQEHSLEVAMVAHNLGAIKNEYFGGNVDINKVAVIAMYHEVSE IFTGDMPTPIKYFDPKLRELYGEVETLAQEKMLSTLPDRLQSVYKPILVDAETSPEWPLV KAADTISAYMKCVKELKAGNDEFKEAHDSILAKLKTLNMPEVDMFIELYIPALGKSLDEL NYYEIK >gi|292596535|gb|ADCV01000013.1| GENE 254 271986 - 272870 547 294 aa, chain - ## HITS:1 COG:SPy0642 KEGG:ns NR:ns ## COG: SPy0642 COG1600 # Protein_GI_number: 15674712 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Streptococcus pyogenes M1 GAS # 82 284 113 316 391 148 40.0 1e-35 MKDINLQEICKELHIYEFGIASWPLPEQAKTILFESNPCPFTTEDVEARLLGTTQFMPKS AIVCLFPYHVQHKGHANLSRYTWSTDYHLVINEYLERLIERLQIIDDSAQFSIHCDTSPL ADRYMAYLAGLGFYGKNNCFISPKWGSYVVIGTILTTLELKPNAPLEQSCIGCNRCITAC LGQCLGHDEFKFATCKSYLTQKKGELTDEEEQILAKTPLVFGCDVCQEVCPHNKDIPTTP IPEFQQIEPYINIDELETLTNKEFKAKYGHRAFSWRGKKILMRNQEIIDRKNKL >gi|292596535|gb|ADCV01000013.1| GENE 255 273026 - 273808 1017 260 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0284 NR:ns ## KEGG: Vpar_0284 # Name: not_defined # Def: molybdopterin dehydrogenase FAD-binding protein # Organism: V.parvula # Pathway: not_defined # 1 260 1 260 260 484 96.0 1e-135 MLAFMKVLQPKTVEEAYELATKNKTAPMLAGGCWLRLGRRTWPSVIDMASLDLRYVREED KEFVIGAMATQGDVERFEPLQQFCGGAVVKGVKEILGVQFRNTATMGGSVASKFGFSDII PALLAVHADIVTFKGGRMSMQDYMAYRERDILMEIRIPKVDVPVAVEALRISRGDFPLLT GALRHDEKGVELYIGTRPGVPQLAVKASALLSEKGLSAAKEAGQLASEELVYQSNSHASK EYRMEMVKAMVQRLAKEVAQ >gi|292596535|gb|ADCV01000013.1| GENE 256 273808 - 274260 579 150 aa, chain + ## HITS:1 COG:SSO2433 KEGG:ns NR:ns ## COG: SSO2433 COG2080 # Protein_GI_number: 15899181 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs # Organism: Sulfolobus solfataricus # 5 143 17 157 171 115 40.0 4e-26 MELVLNINNKNVTVNVPTDEMLLDTLRNLGYYSVRCGCDTTNCGLCTVWVDDEIILSCAY PTFRAPGHKITTLEGLQEEAELLAACIASEGADQCGFCTTGMMMSAINLKRKNPKASDDE IREYLIGNLCRCTGYESQLRGVRKFLEGGL >gi|292596535|gb|ADCV01000013.1| GENE 257 274260 - 276557 2698 765 aa, chain + ## HITS:1 COG:ygfN_2 KEGG:ns NR:ns ## COG: ygfN_2 COG1529 # Protein_GI_number: 16130783 # Func_class: C Energy production and conversion # Function: Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs # Organism: Escherichia coli K12 # 6 761 6 789 790 449 35.0 1e-126 MMNKHIGKSYDKVDSKGILSGKPSYTGDFVPKDALVIKALRSPHAQARIKSIDTSKAKLI PGVEAIFTYEDVPNTRFTLAGQTYPEPSAYDALILDPVVRYVGDEVALIVAKDEATALKA MPLIKVEYEVQKPVLDMHTAIDHETIVHPEDDIHNNIPVGQDYKRNICVSYHKRVGDVEA ELAKCDYVAEGTYFDQATRQTAMEPFQSFGYIDALGRVVIVSSTQIVFHVRRHIARALGI PATKVRVIKPRIGGGFGSKQTACTEIMTAFVAWTLKKPCYLLYDRTEAQTCSTTRHAREW KIRVGATKDGIIKVIDMDSITAAGAHATHCFTTTTAGEHKSVPLYNKATAVHYGTEGVYT NQTPGGAFRGYGATEALWPLECAVNQLADKMGIDPAELREKNLIAEGEQSLVYAPDEYLD SGLFQDTVNRVKEMARWDERPHSWDIDERYRGGLGMALALQGSGVANIDVASVEIRLGDD GNYTLYTGSSDMGMGSNTVLTQMACEVIGCPMEYMTVIESDTDIVPFDPGSYASSTTYVT GTAAKMAAEELRTKIIAKFAQFFETDVENVDFDGVVATTKDGAKTMDIHQLAPKLLVGVN AEQLSGFATWGSHTSPPPFMASIAEVKVDKQTGKVIPLHFYSCVDCGTVINPKLARVQVE GGVVQAIGMALYEDVRYSNNGRLETNNLMTYKIPTRQDIGELHTDFVESYEPTGGFGAKS IGEVVINTGCPAIQHAIKNAVGADIRTLPMTPEKVFMAMDEKYKV >gi|292596535|gb|ADCV01000013.1| GENE 258 276599 - 277357 695 252 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0287 NR:ns ## KEGG: Vpar_0287 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 252 1 252 252 517 98.0 1e-145 MTSQTSYWNRLIQPGIVALVGAGGKTTVLSKLVEYGRLKGQPIVVTTTTRLYESQVAHYE PIYTRNINEADEYCTDRLLRGYCGAWFAGITGTKVDSLDCDLIDGLSKLHPNWQIVVEAD GAKEKWLKAPKMTEPVIPSLTKTTIGLVNLQMLGAPLDDEHVHNIELVQDIVKRDMGAIV TPRMLADLVLHRQGLFQYSKGKKILFCTGYETVQHRIIDDFIDHIVDSDITAIILADGYK ASCEIRRIIQCR >gi|292596535|gb|ADCV01000013.1| GENE 259 277364 - 278086 636 240 aa, chain + ## HITS:1 COG:mlr0093_2 KEGG:ns NR:ns ## COG: mlr0093_2 COG2068 # Protein_GI_number: 13470396 # Func_class: R General function prediction only # Function: Uncharacterized MobA-related protein # Organism: Mesorhizobium loti # 24 230 9 198 206 64 27.0 2e-10 MTIMKANCNTAFSPMRDPIDRHPLHIGIVLLVGGQSKRMGCNKQLLPWRGKTVLDAVCGA LQGGWGGQVASTVSCMLPFVAVTGDDHEKLEPIVTNYGFEAIRNDHPELGQGVSIAMGVR HLMNTSPIPLDGILCSVGDQPLLTSAVVHEVIRAFNENFHPETIVVPHYGANYHSGNPVL FGSHWFDYLQQIQGDQGGKTIIHGDGKAHVVKLWISDDIGDDIDTPDDFERLKHRESEAL >gi|292596535|gb|ADCV01000013.1| GENE 260 278083 - 278895 862 270 aa, chain + ## HITS:1 COG:yqeB KEGG:ns NR:ns ## COG: yqeB COG1975 # Protein_GI_number: 16130777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Escherichia coli K12 # 4 256 270 523 541 226 48.0 5e-59 MKPLVLMRGGGDIASGAVYRLRRAGYPVVISEIAIPTMIRREVCYGNAVHRGEMILERFV ARHVSLSEVKDTLAQEIIPVVTSSYEELLDTLKPEIVVDAILSKKNLGTKRDDADLVIGV GPGFIAGEDVDVVIETMRGHSLGRCIYDGPAQPNTGIPGNVGGYTHERVIHSPKAGLFTA KRHIGDSVQANEVIGYVDEEPVRAKITGILRGILKSGLIVSDHFKLADVDARCEESHCYS ISDKSLAVGGGVLEAVTAWDYERNLDGNNL >gi|292596535|gb|ADCV01000013.1| GENE 261 278879 - 279607 686 242 aa, chain + ## HITS:1 COG:mlr0092 KEGG:ns NR:ns ## COG: mlr0092 COG1975 # Protein_GI_number: 13470395 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Mesorhizobium loti # 77 228 75 225 245 85 31.0 6e-17 METIYDVMKDRLQVTETTVMVTVLSGPRQGDKTIYAEDGRVLYGTPIEGFTVDKAKLNSL CMVGEMECFVQPVENDPSVLVLGAGHVSRAITDLLLFIGCRVTVVDDRPEYVVPEFFDER VIRKCLPLENFKNDLPLDEYTGFIIVTRAHEYDNICLEQLRGYLPTYMGVMGSQKRIHHA FEVLREQGWTQDELDMVYAPIGLDLGAQTPEEIALSIVSEYLAVVRGKKGGSLRKGRVIH ES >gi|292596535|gb|ADCV01000013.1| GENE 262 279597 - 279911 470 104 aa, chain + ## HITS:1 COG:mlr0091 KEGG:ns NR:ns ## COG: mlr0091 COG1975 # Protein_GI_number: 13470394 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Mesorhizobium loti # 12 100 22 109 112 57 32.0 5e-09 MNREFIEYLSERKNETLAVATILYTCGSTPRKAGTSMVVFPDGSIFGTIGGGRAENEIRL SAVDSLNKKEAHRRIDVHLDDDVAVKEGMVCGGQMDVWIETQNI >gi|292596535|gb|ADCV01000013.1| GENE 263 280029 - 280841 1096 270 aa, chain + ## HITS:1 COG:BS_ybbP KEGG:ns NR:ns ## COG: BS_ybbP COG1624 # Protein_GI_number: 16077243 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 12 270 12 271 273 233 44.0 4e-61 MHIDALIHTFRLLDIVDIIIVAIGIYYLYKLLKDTRAVSLLKGLVMLAILNLLSHLLNLY VINWILQQSMTVLLFALPVVFQPELRRALEQLGRGRIFSKAQNVNEEEMDMAINEVMAAA RVMSREHTGALIVFEREVGLNDFVDTGILIDAVLSRELIKNIFVPSTPLHDGALIIRDGR IRAAGCLLPLTEDRTLSTELGTRHRAAIGLSEQTDAVVVVVSEETGTISYTYGGHIYRHL PEDQIKEALRTFMERPRQTITSMWKWRANK >gi|292596535|gb|ADCV01000013.1| GENE 264 280838 - 281764 1154 308 aa, chain + ## HITS:1 COG:lin2224 KEGG:ns NR:ns ## COG: lin2224 COG4856 # Protein_GI_number: 16801289 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 35 304 45 315 452 79 25.0 9e-15 MMIHLKRNWPAKLLSLLAAIVMWFFIMRDQNPVMEVTYTIPVQVQNLNSGYIIEDAPDVV RVVLAGPRDTIMSMKSDNLRAYIDASGVKPGQNNVTINFTPPAGMNLVEVKPDNIIINVD EYAEKTIPVEIVPIGKFSDDIALKSVTIVPKEVTVSGRKQQVNAVSKVVMKVNVAGQTKN FSAVSTLEAWDAVGNVLDVHINPNQGQAQYELNLLRKEKAVPITVPTVGTVAEGYEVKST SATPTQLTVTGREEMIDSVTEIQTEPIDVSGATETVQGNYNLVLPNGVNSNTTTVRVKVE IQKKVLNG >gi|292596535|gb|ADCV01000013.1| GENE 265 282005 - 283579 2022 524 aa, chain + ## HITS:1 COG:L195271 KEGG:ns NR:ns ## COG: L195271 COG2509 # Protein_GI_number: 15673161 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Lactococcus lactis # 7 522 16 530 535 470 48.0 1e-132 MAVMVKSDIKSIVEKKYPPLRGAIETIHVVRRAVDARKKPNIVFVYTLFIEVHNEAQVMK KLGKEKDISVFAAEDPEPIVFGSVPLAHRPVVMGFGPAGMLAAFYLAREGYRPIVLERGQ DVDTRSHDVETFWKKGIFKPESNVQFGEGGAGTFSDGKLTTRITHPRLHEISKYFVEFGA PEEILYKHKPHVGTDKLRTMVKAMRERIIEWGGEVRFGSKVTDLFIENDRIVGVEVNGSE RIDTTVVLSGVGHSARDTYEMLYKRNVEMMAKPFAIGVRIEHDQSVIDESQYGVEPSSLG LGAAEYSLVYHDKESGRTAYSFCMCPGGQVVASASEDGGVVVNGMSLYARDSGVANSAIV VNVGPDDFGTHPLDGVAFQREWERKAYELGGSNFHAPAQTVGQFLGLSQAPSVQNSIYSY EPGVVNCDLHDCLPSFVTSVLERALPYWGRRIRGFDDPAVCMTGVETRTSAPLRMGRNEE RISPTVGGFYPMGEGAGYAGGIMSAALDGAETAILCMAKYAKPN >gi|292596535|gb|ADCV01000013.1| GENE 266 283766 - 285118 1766 450 aa, chain + ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 1 448 1 447 448 437 51.0 1e-122 MARLFGTDGVRGVVNEFLTPELAYHLGRAAGTHFGKKKDHPTFLIGRDTRISGSMLESAL AAGICSVGGNVVIAGVIPTPAVAYLVRQQGFDAGAVISASHNPYPDNGIKFFDGNGYKLP DEVEDELEKYVRQSADNELARPTGDGIGKIEFNSNLAHLYAHFVRHTIDTSLEGLTIVYD GANGAASSVGPEILSGLGAKVININVNPDGLNINHHCGSTHIEGLQVAVQQHNADLGIAN DGDADRCLLVDEKGQVLDGDQIMLLCALKLKEEGKLKGDTIVGTVMSNIGFHKAAEELGM KTVSTAVGDRYVLEYMREHNLSVGGEQSGHVIFLDHNTTGDGMLTAVQVAALMKEKKQPL SELAGIMTKYPQVLVNVRVATKTGWEDNDLIKAAIVTAEGELGDEGRVLVRASGTEPLIR VMAEGPNQEELQSLCQEIADIIGREQGLAE >gi|292596535|gb|ADCV01000013.1| GENE 267 285443 - 286138 614 231 aa, chain + ## HITS:1 COG:YPO2758 KEGG:ns NR:ns ## COG: YPO2758 COG1794 # Protein_GI_number: 16122962 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Yersinia pestis # 1 224 2 226 231 263 59.0 2e-70 MKTIGLIGGMSWESTITYYQVLNETIKQVLGGLHSAKCILYSVDFEEIEKCQANGDWVRS AEILSDAAQSLEKAGADYIVICTNTMHKVADEIKRHIHIPLLHIAEMTAVELEKSGITKV GLLGTKYTMQQDFYKCILENRGIHVVIPNEDQVELVNDIIYNELCLGVISNESKQQYLDI IGDLVKSGVQGVILGCTEIGLLIKQDDTDIPLFDTTLIHAKNAALISIDRA >gi|292596535|gb|ADCV01000013.1| GENE 268 286383 - 287495 767 370 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0297 NR:ns ## KEGG: Vpar_0297 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 364 1 363 363 502 73.0 1e-141 MKVAIKEYWENLKVEYEATYNASIFSDYDVLKQYAERFRTYLITLMCEYSNDVDVVCTLA TVEQVLRDEKNSIELLEGFLEAYTNELSDTDKARIYTNLAFYYNDEGSIKEYDYLSAAVK LDSPYIETYRGLALYHFSSYADKGSIEALKKSLCAFEKGRIVSNDYEMNFGYAVCLFELK KYEKARAIFEELLKSYPNRMKLLVCIVYCDVYLGNKKQDLDRLKQIKLGGDVAYHLSNDE VFEFDIIDVYFILDEYSLFLDECEKAKEHCDLSDGPYYFGLWIMNQHDMFHREVDKQRNE ILTCIEDAKMDEDFDSEEEKQEYINSWEDDLENLNLLEHKIKDENFKPTVELKLWPIYGC YLIDCLTHNF >gi|292596535|gb|ADCV01000013.1| GENE 269 287615 - 289135 1728 506 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0298 NR:ns ## KEGG: Vpar_0298 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 506 1 465 465 642 89.0 0 MNKTTIKKKHKNRKNSLSYRKLRRWVLPAVLGAALSTLAIIPTLAAETQPNTNIAIVTTT EQTKTVPSAQGSTSPNGAPHGKPPAGHSPTGTSNQMPPNGNPPSGTPNGMPPTAMQNGAH NGMAPQVEVDPSTFKGTTIITENKSIAHESMTNTTADQNAFIGKNKAVIDIENSVFDKTG DTTSDDNSNFRGQNAVVLGIEGSQINIKGSNITSNSKGSNAVFATGEGSVINVENTNIHT KSDSSRGLDATYKGTVNGKNLTITTEGAHSATLATDRGEGTITAEAAKLTTSGEGSPVIY STGNIMVNNVNGIANNSEIGVVEGKNSITLTNSNVTGYKDNGFMLYQSFSGDAESGIARL KAENNTLTTHATGAFLYVNNTTAEVDLSNNAISMPNTSTLVKAAADSRWGKTGENGGHLT LRTSNQELSGNIMADSISTIALDMTNGSSLVGAVNTDNTAKEVTVKLSKDSNWILTGDSY VKSLSNEDTTGSNIQLNGYKLVVADK >gi|292596535|gb|ADCV01000013.1| GENE 270 289264 - 289458 81 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRSLFTSSTLTTAFVGTCAIRLYEFGIPFCNIWQNQYKIKYVLRYIILKKSIKSKPPQI IQKE >gi|292596535|gb|ADCV01000013.1| GENE 271 289660 - 291492 2706 610 aa, chain + ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 610 1 608 608 681 55.0 0 MCGIVGYIGFNQASDFLLDGMAKLEYRGYDSAGIAVIGPENVIKIQKKVGRLANLEAVVK ADPNEGTVGIGHTRWATHGRPSDMNAHPHASEDSKFAVVHNGIIENYMPLKEELIEKGYH FKSETDTEVVAHLLADMYDGDFVGTVRRMLARVDGAYALEIICADEPDKIICTKKENPLV IGLGKGENFVASDIPAIINYTRDTYILSDGELAIVTRDNVSVFDREGKPVDKEVFHVNWN AEAAEKGGYEHFMLKEIHDQPKAVRDTFGTHISEDGKTAIFNELNWTAEDVAAFNKILIV ACGTAYHAGLVTKQYIENLARIPVDVEIASEYRYSNPLTDDKTLCIVISQSGETSDTLAA LKEAKRLGAKSLAITNVVGSSISREADNKVYTWAGPEISVASTKAYTTQLVAGLLFAVYL GQLNGKLNPALAEEILSGVKNLPSLIHEIFEVDEDMKAFAKHYGFKSDAFFLGRAIDYAV AMEGALKLKEISYIHAEAYAGGELKHGTLALIEEGVPVIALATQEDVYDKMISNIREVKA REAIVIGIGMKGDEELSKHVDHTIYVPRANKFIAPILAVVPLQLLAYYVAITRGADVDKP RNLAKSVTVE >gi|292596535|gb|ADCV01000013.1| GENE 272 291549 - 292535 1256 328 aa, chain + ## HITS:1 COG:BS_trpS KEGG:ns NR:ns ## COG: BS_trpS COG0180 # Protein_GI_number: 16078207 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Bacillus subtilis # 4 328 5 328 330 410 62.0 1e-114 MAVIFSGIQPSGELTLGNYLGALRNFLDYQDTDECYYCIVNQHAITVPQDPKELFQNTRN LAALYLAVGLDPKKVTLFVQSEVPEHVKLGWVMQSISYVGELERMTQYKDKSQKQGDSIP TALLTYPPLMAADILLYGTNYVPVGEDQKQHLELTRNLAERFNRRFGETFVVPDIKVGEG GARVMSLQEPTKKMSKSDDNQNATIRLLDAPDLIVKKLKRAQTDSDNAVRYDKENKPGIS NLMGIYRAITKDSYEAIEEMYAGKGYGVFKSDIADLLVATLEPIQQRYNELITSPELDVI LDEGAAKAHAKASAMYRKVEQAMGLCRK >gi|292596535|gb|ADCV01000013.1| GENE 273 292572 - 293048 216 158 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0301 NR:ns ## KEGG: Vpar_0301 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 158 1 158 158 285 97.0 5e-76 MTKQEAMERFSSGAVQQSLEIHRGIQWTGRIIGLVACALIVKYMPSDWAERVWYYLLLLV ILWTLHRLGESQAFICEKGLVLKRRPFSVKEYFYSLFYGDEYFVFVDYEHIIGFTEEWRE LQAMNGHGGIYVIPLDLHQVAYKDKMAMIEAIHKHTQS >gi|292596535|gb|ADCV01000013.1| GENE 274 293306 - 294118 1186 270 aa, chain + ## HITS:1 COG:SPy1274 KEGG:ns NR:ns ## COG: SPy1274 COG0834 # Protein_GI_number: 15675229 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pyogenes M1 GAS # 5 259 4 268 278 159 36.0 4e-39 MNWKKMMAVGLAAVSMMAFVTGCGGDAKKANTELPKKIVIGLDDSFPPMGFKDDKGEIVG LDIDMAKEAAKRAGMDVEFKAIDWSSKEAELKSKKIDALWNGLTVSPEREKNILFSNTYM KDKQYIIVRNDDDSIKGKADLAGKVVGVQQASTGEAALQNDPSGKTVKETKSYADFVSAF MDLGIGRVDAVIADGVIARYLMTKEPGKYKIVEGTDYGVDNFAVGFRKDDTALRDKINGI LAEMKKDGTADKIAEKWLGSGADLDKSDAK >gi|292596535|gb|ADCV01000013.1| GENE 275 294242 - 294898 754 218 aa, chain + ## HITS:1 COG:lin1851 KEGG:ns NR:ns ## COG: lin1851 COG0765 # Protein_GI_number: 16800918 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Listeria innocua # 2 217 1 213 213 179 47.0 3e-45 MLDYLLQIIPTIADGLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAFVYLMR GTPLMLQILFVYYALPIITDGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYE GAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQ RDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED >gi|292596535|gb|ADCV01000013.1| GENE 276 295051 - 295806 265 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 19 236 147 353 398 106 32 9e-22 MTFVNMERIEKRFNNQSVLRDVSLKMNRGEIVSIIGPSGSGKSTFLRCLGQLETIDGGSI TVDGTVLANTENGVVKYASPQTQHELLLRMGMVFQSFNLFPHMTVLDNIMIAPRMVKGMK DDEISPIAEQLLNKVGLWEKRNMYPSRLSGGQQQRVAIARALAMNPEIMLFDEPTSALDP ELTGEVLKTIKQLADDHMTMIIVTHEMNFAREVSDRVIFMADGVIQEEGTPEQIFNHPQN ERTKAFLDNML >gi|292596535|gb|ADCV01000013.1| GENE 277 295815 - 297086 1334 423 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0305 NR:ns ## KEGG: Vpar_0305 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 423 1 423 423 820 98.0 0 MKLRLFAATLAVMALGTTSIMAEGLQKTPDTPLSIVESQKDSASILPEQYKSYATKMNTV VKDYKNGYMFSIPWRVADGVMLDMDVRSESEHIQGYSFNLAGPTQEDSYTVSFTKRNNTP QEGVSQKEWNTTWYGVPIKGMSNEEYLNIWRQHSNNFEHNDIIGGFFTKKGAVSARWDKS TPKSYADMTSTEPVQSVFEAEFIMEKDPTHRYNLSSTYAPVRAEFMELGLMEHTIPSFEL INKRGSNAIKGVKKILTGTSDISVAEGIKFTYPKGFTRLNEKGKIAFTKHNVRLDIESFT IPVQAVSSGMPTMMAKQMLGDYYLKQLVDVNKATITRYETHIIDGNVMFYLAGHMKNPNT SDTSVAEPVSFGATIILGNEGNVAVARMIGPSGSNLATQELIDILDGFKLTTTLNTNQSS QVL >gi|292596535|gb|ADCV01000013.1| GENE 278 297256 - 297702 698 148 aa, chain + ## HITS:1 COG:lin1615 KEGG:ns NR:ns ## COG: lin1615 COG0589 # Protein_GI_number: 16800683 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Listeria innocua # 4 148 5 144 152 85 37.0 3e-17 MVTYKTIVVPTDGSENAKRALEHALAVADRNQAELIVVHVANIVSAISNFDQTPISGGYV SEQIAEDMEETGKEILNDVVKEIPAGVKVKSIFEVGSPGPALLAVAKKYNADLIVMGSRG LGPLKGLFMGSVSSYVTSHSTCPVLIIK >gi|292596535|gb|ADCV01000013.1| GENE 279 297895 - 298185 350 96 aa, chain + ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 93 30 119 122 95 51.0 3e-20 MTDKQESLLKLAELFKILGDPTRLKIVELLLENEMCVNHIAETMEMGQSAISHQLRVLRQ ARLVTYRKDGKTAYYSLNDDHVECLVRMGMEHVAHQ >gi|292596535|gb|ADCV01000013.1| GENE 280 298329 - 299180 228 283 aa, chain + ## HITS:1 COG:BS_ycbK KEGG:ns NR:ns ## COG: BS_ycbK COG0697 # Protein_GI_number: 16077323 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 1 265 19 290 312 89 26.0 1e-17 MFLATVFLSTKSIWAKLIYLDSLSPLNVLVCRAVLSLPFFLIPMIRFDWNSVNKSKVFKY SFLGAILYVSSSITDFIGLLYISASLERAVLFTFPIYVFLLSSDLSRITFSKVVLIVSTV LGLAIMFNPTVDNHLTDTLIGISLVFLSAIFWALFIIYSKRAVSNISSTIFTSTYMCITT VLLLLGFIIDSKNFTTFSTLQTHTMIYLVFLAIFCSIIPSYLMSFGLKRINASLAAVISA MGPIVTLALDVVILNHNLALNEIIGAIIVTACVTCLTRLNAKA Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:20:44 2011 Seq name: gi|292596534|gb|ADCV01000014.1| Veillonella sp. 3_1_44 cont1.14, whole genome shotgun sequence Length of sequence - 112642 bp Number of predicted genes - 127, with homology - 121 Number of transcription units - 44, operones - 22 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 27 - 983 711 ## COG0679 Predicted permeases - Prom 1059 - 1118 10.3 + Prom 1349 - 1408 2.6 2 2 Op 1 23/0.000 + CDS 1436 - 2188 1071 ## COG0725 ABC-type molybdate transport system, periplasmic component + Term 2191 - 2234 7.9 + Prom 2349 - 2408 4.4 3 2 Op 2 2/0.000 + CDS 2428 - 3096 693 ## COG4149 ABC-type molybdate transport system, permease component 4 2 Op 3 . + CDS 3105 - 3734 190 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 3967 - 3991 -1.0 - Term 3752 - 3805 7.1 5 3 Tu 1 . - CDS 3870 - 5093 1292 ## COG1457 Purine-cytosine permease and related proteins - Prom 5128 - 5187 1.8 + Prom 5241 - 5300 8.4 6 4 Op 1 . + CDS 5467 - 5946 442 ## COG4732 Predicted membrane protein 7 4 Op 2 11/0.000 + CDS 5946 - 6779 959 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 8 4 Op 3 . + CDS 6793 - 8310 1473 ## COG0352 Thiamine monophosphate synthase + Term 8433 - 8468 5.1 - Term 8412 - 8463 13.1 9 5 Tu 1 . - CDS 8570 - 9115 906 ## COG1592 Rubrerythrin + Prom 9776 - 9835 10.9 10 6 Op 1 . + CDS 9866 - 10069 209 ## COG4481 Uncharacterized protein conserved in bacteria 11 6 Op 2 . + CDS 10079 - 11110 1309 ## COG0709 Selenophosphate synthase + Prom 11113 - 11172 7.1 12 7 Op 1 . + CDS 11281 - 11880 694 ## Vpar_0319 SirA family protein + Prom 11897 - 11956 4.2 13 7 Op 2 . + CDS 12005 - 12262 371 ## Vpar_0320 hypothetical protein + Term 12277 - 12320 9.5 + Prom 12299 - 12358 4.7 14 8 Op 1 . + CDS 12403 - 12930 741 ## ETA_14530 hypothetical protein 15 8 Op 2 . + CDS 12987 - 13313 359 ## COG1733 Predicted transcriptional regulators 16 8 Op 3 . + CDS 13354 - 14061 1086 ## COG0778 Nitroreductase + Term 14141 - 14201 8.3 + Prom 14098 - 14157 9.5 17 9 Op 1 . + CDS 14218 - 14457 389 ## COG2261 Predicted membrane protein 18 9 Op 2 . + CDS 14522 - 14758 460 ## Vpar_0323 CsbD family protein + Term 14782 - 14843 14.4 - Term 14773 - 14825 13.5 19 10 Tu 1 . - CDS 14837 - 15943 1814 ## COG0012 Predicted GTPase, probable translation factor + Prom 16094 - 16153 9.3 20 11 Tu 1 . + CDS 16297 - 17469 1049 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases + Term 17502 - 17537 5.1 - Term 17488 - 17523 5.1 21 12 Op 1 35/0.000 - CDS 17640 - 18416 423 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 22 12 Op 2 33/0.000 - CDS 18413 - 19420 338 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 23 12 Op 3 . - CDS 19434 - 20534 821 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 20565 - 20624 9.0 - Term 20687 - 20731 6.5 24 13 Tu 1 . - CDS 20738 - 21709 1319 ## Vpar_0329 diaminopimelate dehydrogenase - Prom 21746 - 21805 9.9 + Prom 21761 - 21820 8.4 25 14 Tu 1 . + CDS 22001 - 24223 2976 ## COG3468 Type V secretory pathway, adhesin AidA + Term 24327 - 24387 6.1 - Term 24410 - 24458 5.2 26 15 Tu 1 . - CDS 24477 - 25706 1618 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 25741 - 25800 7.3 + Prom 25894 - 25953 12.1 27 16 Op 1 . + CDS 26044 - 27126 875 ## Vpar_0333 hypothetical protein 28 16 Op 2 . + CDS 27136 - 28311 529 ## Vpar_0334 beta-lactamase domain protein + Term 28356 - 28397 1.1 + Prom 28510 - 28569 6.7 29 17 Tu 1 . + CDS 28589 - 29818 1081 ## COG0477 Permeases of the major facilitator superfamily + Term 29822 - 29875 8.6 + Prom 29828 - 29887 9.3 30 18 Op 1 24/0.000 + CDS 29961 - 30245 471 ## PROTEIN SUPPORTED gi|227372738|ref|ZP_03856218.1| SSU ribosomal protein S6P 31 18 Op 2 21/0.000 + CDS 30265 - 30663 425 ## COG0629 Single-stranded DNA-binding protein 32 18 Op 3 . + CDS 30703 - 30933 394 ## PROTEIN SUPPORTED gi|227372736|ref|ZP_03856216.1| SSU ribosomal protein S18P + Term 30938 - 30992 12.8 + Prom 31108 - 31167 12.5 33 19 Tu 1 . + CDS 31359 - 32045 763 ## Vpar_0345 hypothetical protein + Term 32052 - 32090 7.0 + Prom 32113 - 32172 8.6 34 20 Op 1 . + CDS 32247 - 32906 861 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase 35 20 Op 2 . + CDS 32908 - 34233 1527 ## COG0772 Bacterial cell division membrane protein + Prom 34242 - 34301 5.7 36 21 Tu 1 . + CDS 34362 - 35645 1027 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Prom 35747 - 35806 10.2 37 22 Op 1 3/0.000 + CDS 35843 - 36307 577 ## COG1030 Membrane-bound serine protease (ClpP class) 38 22 Op 2 . + CDS 36344 - 37300 1570 ## COG4864 Uncharacterized protein conserved in bacteria 39 22 Op 3 . + CDS 37309 - 37965 673 ## Vpar_0351 hypothetical protein + Term 38099 - 38158 14.8 + Prom 38126 - 38185 5.6 40 23 Op 1 . + CDS 38219 - 38950 503 ## Vpar_0352 hypothetical protein 41 23 Op 2 . + CDS 39005 - 39943 1068 ## Vpar_0353 hypothetical protein + Prom 39970 - 40029 4.9 42 24 Op 1 . + CDS 40092 - 40685 670 ## COG3663 G:T/U mismatch-specific DNA glycosylase + Prom 40825 - 40884 13.5 43 24 Op 2 . + CDS 40945 - 42195 1328 ## COG0477 Permeases of the major facilitator superfamily + Term 42205 - 42257 14.4 - Term 42197 - 42239 6.1 44 25 Tu 1 . - CDS 42273 - 43496 1523 ## COG2195 Di- and tripeptidases - Prom 43578 - 43637 10.4 + Prom 43564 - 43623 6.5 45 26 Tu 1 . + CDS 43746 - 45683 2332 ## COG1297 Predicted membrane protein + Term 45757 - 45820 15.0 46 27 Op 1 . + CDS 46035 - 46820 977 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 47 27 Op 2 . + CDS 46897 - 47922 1133 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) + Term 47943 - 47980 6.1 - TRNA 48019 - 48109 63.6 # Ser GGA 0 0 - Term 48288 - 48321 4.5 48 28 Tu 1 . - CDS 48327 - 49562 1374 ## COG0426 Uncharacterized flavoproteins - Prom 49635 - 49694 6.0 - Term 49661 - 49707 7.1 49 29 Tu 1 . - CDS 49728 - 53468 4596 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 53511 - 53570 8.5 + Prom 53484 - 53543 6.4 50 30 Tu 1 . + CDS 53736 - 54641 1228 ## COG0583 Transcriptional regulator + Term 54660 - 54704 10.2 + Prom 54708 - 54767 5.8 51 31 Op 1 . + CDS 54896 - 55471 838 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 52 31 Op 2 . + CDS 55499 - 55945 511 ## Vpar_0364 hypothetical protein 53 31 Op 3 . + CDS 55957 - 56397 439 ## Vpar_0365 hypothetical protein 54 31 Op 4 . + CDS 56465 - 56653 65 ## + Term 56792 - 56824 1.0 + Prom 56657 - 56716 5.4 55 32 Op 1 4/0.000 + CDS 56832 - 57323 664 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase + Prom 57347 - 57406 4.0 56 32 Op 2 2/0.000 + CDS 57426 - 58154 1035 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 57 32 Op 3 13/0.000 + CDS 58166 - 59584 1333 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 58 32 Op 4 21/0.000 + CDS 59571 - 60632 869 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 59 32 Op 5 10/0.000 + CDS 60625 - 61248 685 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 60 32 Op 6 17/0.000 + CDS 61273 - 62802 1917 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Prom 62856 - 62915 4.8 61 32 Op 7 . + CDS 62949 - 64211 1479 ## COG0151 Phosphoribosylamine-glycine ligase + Term 64235 - 64293 11.9 + Prom 64262 - 64321 6.7 62 33 Op 1 10/0.000 + CDS 64474 - 65616 970 ## COG1169 Isochorismate synthase 63 33 Op 2 15/0.000 + CDS 65657 - 67420 1339 ## COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 64 33 Op 3 9/0.000 + CDS 67417 - 68277 933 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 65 33 Op 4 2/0.000 + CDS 68282 - 69124 1158 ## COG0447 Dihydroxynaphthoic acid synthase + Term 69174 - 69216 5.7 + Prom 69212 - 69271 7.4 66 34 Op 1 4/0.000 + CDS 69328 - 70737 1115 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 67 34 Op 2 1/0.083 + CDS 70745 - 71896 819 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 68 34 Op 3 . + CDS 71893 - 72270 367 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 72371 - 72414 6.5 - Term 72359 - 72402 6.5 69 35 Tu 1 . - CDS 72507 - 73127 509 ## Vpar_0380 hypothetical protein - Prom 73316 - 73375 8.5 + TRNA 73463 - 73538 69.7 # Asp GTC 0 0 + TRNA 73560 - 73635 89.0 # Phe GAA 0 0 + TRNA 73648 - 73733 58.2 # Leu GAG 0 0 - Term 73733 - 73776 9.3 70 36 Op 1 . - CDS 73826 - 74899 336 ## COG0582 Integrase 71 36 Op 2 . - CDS 75066 - 76097 172 ## Smon_1019 Abi family protein - Prom 76130 - 76189 3.3 - Term 76108 - 76153 12.2 72 37 Op 1 . - CDS 76233 - 76616 297 ## gi|294794985|ref|ZP_06760120.1| hypothetical protein HMPREF0873_01602 73 37 Op 2 . - CDS 76634 - 76936 125 ## gi|294794986|ref|ZP_06760121.1| putative toxin-antitoxin system, toxin component 74 37 Op 3 . - CDS 76926 - 77147 198 ## gi|294794987|ref|ZP_06760122.1| hypothetical protein HMPREF0873_01604 75 37 Op 4 . - CDS 77149 - 77523 470 ## Vpar_0382 transcriptional regulator, XRE family - Prom 77561 - 77620 7.2 + Prom 77576 - 77635 10.9 76 38 Tu 1 . + CDS 77670 - 77879 245 ## gi|294794989|ref|ZP_06760124.1| putative toxin-antitoxin system, antitoxin component, Xre family - Term 77956 - 78011 10.4 77 39 Tu 1 . - CDS 78123 - 78917 49 ## LSEI_0496 hypothetical protein - Prom 78937 - 78996 5.0 + Prom 78859 - 78918 6.7 78 40 Tu 1 . + CDS 79098 - 79373 230 ## gi|294794991|ref|ZP_06760126.1| conserved hypothetical protein - Term 79112 - 79154 8.1 79 41 Tu 1 . - CDS 79341 - 79934 296 ## Sterm_0826 hypothetical protein - Prom 79954 - 80013 7.0 80 42 Op 1 . + CDS 80044 - 80244 103 ## gi|294794993|ref|ZP_06760128.1| putative DNA binding domain, excisionase family 81 42 Op 2 . + CDS 80249 - 80425 139 ## gi|294794994|ref|ZP_06760129.1| hypothetical protein HMPREF0873_01611 82 42 Op 3 . + CDS 80412 - 80510 159 ## 83 42 Op 4 . + CDS 80507 - 80701 132 ## 84 42 Op 5 . + CDS 80730 - 81101 353 ## gi|294794995|ref|ZP_06760130.1| hypothetical protein HMPREF0873_01612 85 42 Op 6 . + CDS 81113 - 81502 262 ## gi|294794996|ref|ZP_06760131.1| surface antigen (D15) 86 42 Op 7 . + CDS 81477 - 82118 768 ## gi|294794997|ref|ZP_06760132.1| putative choline binding protein A 87 42 Op 8 . + CDS 82121 - 82489 525 ## gi|294794998|ref|ZP_06760133.1| conserved hypothetical protein 88 42 Op 9 . + CDS 82504 - 84159 1123 ## Dred_1195 hypothetical protein 89 42 Op 10 . + CDS 84169 - 86076 1543 ## lin1241 hypothetical protein 90 42 Op 11 . + CDS 86079 - 86849 696 ## COG3645 Uncharacterized phage-encoded protein 91 42 Op 12 1/0.083 + CDS 86860 - 87732 874 ## COG3723 Recombinational DNA repair protein (RecE pathway) 92 42 Op 13 . + CDS 87735 - 88457 210 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 93 42 Op 14 . + CDS 88454 - 88894 411 ## gi|294795004|ref|ZP_06760139.1| conserved hypothetical protein 94 42 Op 15 . + CDS 88900 - 89838 394 ## Abu_1710 hypothetical protein 95 42 Op 16 . + CDS 89933 - 90460 182 ## COG1484 DNA replication protein 96 42 Op 17 . + CDS 90457 - 90855 183 ## lp_2433 prophage Lp2 protein 24 97 42 Op 18 . + CDS 90874 - 91422 194 ## SPJ_1864 GP37 98 42 Op 19 . + CDS 91451 - 91825 356 ## gi|294795009|ref|ZP_06760144.1| conserved hypothetical protein 99 42 Op 20 . + CDS 91837 - 92076 131 ## gi|294795010|ref|ZP_06760145.1| hypothetical protein HMPREF0873_01627 100 42 Op 21 . + CDS 92097 - 92186 56 ## 101 42 Op 22 . + CDS 92179 - 92709 482 ## CLH_0887 hypothetical protein + Term 92713 - 92749 1.2 - Term 92805 - 92854 4.6 102 43 Tu 1 . - CDS 92920 - 93051 244 ## - Prom 93299 - 93358 10.4 + Prom 93700 - 93759 10.0 103 44 Op 1 . + CDS 93889 - 94419 359 ## CLH_1731 hypothetical protein 104 44 Op 2 . + CDS 94453 - 96357 1307 ## COG5525 Bacteriophage tail assembly protein 105 44 Op 3 . + CDS 96366 - 96611 94 ## gi|294795015|ref|ZP_06760150.1| conserved hypothetical protein 106 44 Op 4 4/0.000 + CDS 96621 - 98228 1029 ## COG5511 Bacteriophage capsid protein 107 44 Op 5 . + CDS 98221 - 99303 1234 ## COG0740 Protease subunit of ATP-dependent Clp proteases 108 44 Op 6 . + CDS 99303 - 99644 480 ## gi|294795018|ref|ZP_06760153.1| conserved hypothetical protein 109 44 Op 7 . + CDS 99658 - 100707 1296 ## Dred_1207 hypothetical protein 110 44 Op 8 . + CDS 100722 - 100958 374 ## gi|294795020|ref|ZP_06760155.1| hypothetical protein HMPREF0873_01637 111 44 Op 9 . + CDS 100958 - 101311 314 ## Dred_1208 hypothetical protein 112 44 Op 10 . + CDS 101299 - 101832 630 ## gi|294795022|ref|ZP_06760157.1| hypothetical protein HMPREF0873_01639 113 44 Op 11 . + CDS 101832 - 102311 595 ## gi|294795023|ref|ZP_06760158.1| conserved hypothetical protein 114 44 Op 12 . + CDS 102321 - 102548 160 ## gi|294795024|ref|ZP_06760159.1| conserved hypothetical protein 115 44 Op 13 . + CDS 102549 - 103988 1549 ## COG3497 Phage tail sheath protein FI 116 44 Op 14 . + CDS 104005 - 104538 909 ## Amico_1113 major tail tube protein 117 44 Op 15 . + CDS 104561 - 104848 338 ## gi|294795027|ref|ZP_06760162.1| conserved hypothetical protein 118 44 Op 16 . + CDS 104911 - 105018 63 ## 119 44 Op 17 . + CDS 105018 - 107354 1672 ## BCQ_PT26 phage protein 120 44 Op 18 . + CDS 107347 - 107550 171 ## Amico_1110 putative phage tail protein gpX 121 44 Op 19 . + CDS 107554 - 108714 841 ## COG3500 Phage protein D 122 44 Op 20 . + CDS 108704 - 109171 645 ## Dred_1217 phage baseplate assembly protein V 123 44 Op 21 . + CDS 109181 - 109657 477 ## Amico_1106 hypothetical protein 124 44 Op 22 . + CDS 109660 - 109971 321 ## Amico_1105 gpW/GP25 family protein 125 44 Op 23 4/0.000 + CDS 109968 - 111089 1163 ## COG3948 Phage-related baseplate assembly protein 126 44 Op 24 . + CDS 111086 - 111745 315 ## COG4385 Bacteriophage P2-related tail formation protein 127 44 Op 25 . + CDS 111755 - 112640 865 ## Sterm_1448 hypothetical protein Predicted protein(s) >gi|292596534|gb|ADCV01000014.1| GENE 1 27 - 983 711 318 aa, chain - ## HITS:1 COG:BH2670 KEGG:ns NR:ns ## COG: BH2670 COG0679 # Protein_GI_number: 15615233 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 4 310 8 296 298 120 30.0 3e-27 MNSMVPILVLIGVGFILDRRFKLDLYTLSKLNFYILLPTFIFRAMYEAKLNSGTLEIVFC ALCVLILNSILSDVVGKMQGYDVAKIATLKNCVMFNNVGNMGVALAIFVFTNIPYVIDGA TPYANLGLVSVVSIMIIQTISSNTYGFYQAGAGRLTPRDALKVVFHMPMVYAIPLALLCH LLPFDLHGLFFFAPLNIFANAFVGVAMIALGVQINRTPLNFFKMDVMLATTLRLIVSPLI AAGITILFIMFYGPMHPIAAQTIIITYSVPTAINMSLIAIEMKNNPEYATQIVMGTTILS AITMPLFITIAYYLFPLY >gi|292596534|gb|ADCV01000014.1| GENE 2 1436 - 2188 1071 250 aa, chain + ## HITS:1 COG:BS_yvgL KEGG:ns NR:ns ## COG: BS_yvgL COG0725 # Protein_GI_number: 16080391 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Bacillus subtilis # 1 247 12 258 260 163 40.0 3e-40 MLAFLVGCGNDASKPAESAKPSTSEKITVQAAASLKGALTELADAYKKSHNLADDQIAIN FAGSGTLRQQIEQGAPASLFISADEKNMKMLQEKDLVTDVKPFVTNELVLVVPKGQPKVE LNQIATVKRIVLGNPETVPAGNYGKQVLTKLGVWEQVEPNVVYAKDVKAVTASISQGAGD AGFIYKTDAIAAGDAVEISAVTPADSHDPVIYPIGIIKKYDNALAKDFYQYVMSPEGQKV LEKYGFSTSK >gi|292596534|gb|ADCV01000014.1| GENE 3 2428 - 3096 693 222 aa, chain + ## HITS:1 COG:alr2433_1 KEGG:ns NR:ns ## COG: alr2433_1 COG4149 # Protein_GI_number: 17229925 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Nostoc sp. PCC 7120 # 1 202 5 206 223 164 45.0 1e-40 MSPLWLSLWVASIALIIVILNGLATCYWMNRCKWGGIAILDALITLPLVLPPVVVGFALL MVFTPGYAFGAWLEAHDMSVVFAASGAVIASSVIAFPLFYQTVRSALQSVDHNMEDVART LGASELRIFFTISVPLAWKGILTGSILAFCRAMGEFGATILIAGNIPKVTRTMPLAIYSY VEAGQYMDAFELVIYICVLTLALLSGIHLITKGSLFRHIDNN >gi|292596534|gb|ADCV01000014.1| GENE 4 3105 - 3734 190 209 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 28 205 36 219 223 77 32 2e-13 MITFSFTVARPSVTVKADGVLPSGITVLTGQSGSGKSTFIKCIAGLVKPTTGSIHCNETT WVDRDNKIWVPAQKRQVGYMPQGNIVFPHLSVEHNITYSKRGTPDMCNSLLQRLSLEKYR KTKAGSLSGGEQQRVALGRALYSKPTILLLDEPLSALDWNLRKHVREDLVSIIREWDVPC VWVTHDESEAEMVGDRHWTCEEGQIQISK >gi|292596534|gb|ADCV01000014.1| GENE 5 3870 - 5093 1292 407 aa, chain - ## HITS:1 COG:NMA0365 KEGG:ns NR:ns ## COG: NMA0365 COG1457 # Protein_GI_number: 15793373 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Neisseria meningitidis Z2491 # 20 391 15 392 437 246 44.0 7e-65 MTSWQGGRMKNTHITQPQFAMIWFGAALSIAEIMTGTYLAPLGLAQGLYAIILGHIIGGI LLFGAGLIGGRLRQGSMNTTAFSFGPLGAKGFAFLNMLQLIGWTSIMIYDAMLALQALAP LSPMIWTIAIGALVILWLFIGLHNTGYIQAIVSILLLGLTLYMGTHMISQWPSEGGLLTS GNMSFIAALELSIAMPLSWLPLISDYTRESKHPFTASLTSATVYTVTSIVMYTLGLSAAI FGGGDSIITIMMNAGLGLAGLIVIIFSTVTTTFMDAYSAGVSSTTIYNSASSKGIAVIVT IVGTIAAILYPMDDITDFLYLIGSVFTPMIAILLADYFMNRQQVQTLSAFLVRGTIWAVS VGLYHYMLHSESTVGATLPAFTMAFIITTIIGFVSKAVKVSTEVKQP >gi|292596534|gb|ADCV01000014.1| GENE 6 5467 - 5946 442 159 aa, chain + ## HITS:1 COG:SA1136 KEGG:ns NR:ns ## COG: SA1136 COG4732 # Protein_GI_number: 15926877 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 2 157 4 160 163 95 38.0 4e-20 MKKMIIASICVALGVVLSTTSIPIGPARIFPFQHMINVILAVIVGARFSVGAAFSTSCLR NVLALGSPLAFPGSMIGAWLSAYLYKKYNAIWAAALGEIIGTGLIGALVSYPIAHFLLGK PLALLTLITSFSMSSIAGACIGFVVLQILSRRNLLHKEA >gi|292596534|gb|ADCV01000014.1| GENE 7 5946 - 6779 959 277 aa, chain + ## HITS:1 COG:SP0726 KEGG:ns NR:ns ## COG: SP0726 COG0351 # Protein_GI_number: 15900623 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 3 260 4 261 263 294 57.0 1e-79 MKLHTALTIAGTDPSGGAGIMADLKSFQSRNVYGMAVVTSVVAQNTTGVHHVEHLSLESI EKQLHDVYSDITPQAVKTGMIALPEMMDLIYPYVSKNIPYVMDPVMIATSGDRLVSDEAV NFLKSKLIPVATVITPNRSEAEVLADMSITCESDITTAAKRILHELGPRVVIIKGGHIGD DATDYAFTKDGDVRTWTSPKYDTVHTHGTGCTFSAVITAEFAKGRDVMDAIGIAKDYIAL AIKHNPALGHGCGPVNHMAYGLLVNGPQTMDELLKND >gi|292596534|gb|ADCV01000014.1| GENE 8 6793 - 8310 1473 505 aa, chain + ## HITS:1 COG:SA1894 KEGG:ns NR:ns ## COG: SA1894 COG0352 # Protein_GI_number: 15927666 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Staphylococcus aureus N315 # 296 503 7 213 213 192 43.0 1e-48 MIYNNPNINGSNWPELNILETLRKKNPLVICITNDVVRTFTANGLLAIGASPVMSECSED LKDLIVHAAALLINIGTVTPDKVTYYKEAVKLAKAHEVPIVLDPVGCHAGAYRLSVVLDL IKTGAISLLRGNQSEIKAIYDALNTNHKIDSSLSGKGVDGAQVEDSAIITYRLARQINCP VVATGEEDYVSDGTRVFAVPHGHPIMTAVTGTGCLLGAVLAAFFSSYYPFMHNMSIGEFL AYALAYYGLAGESAVKVSGVKPGSFSVAFMDALYEFDDAMLLSGNRIRPVVVPDQLKVYF ISGTQDVGFNERHLLDTVEAACRGGVTCFQFREKGTGTLEGQQKLELAQQLKEICAMYNV LYIINDDVDLAVAVNADGVHVGQEDMRLEDVRNLVGNKVVGISIHSVEELHKTDVVYADC VGVGPMYATSSKPDAQEPCGPDRITELRAEGLTLPCVGIGGITLDNATPVLQAGASGVAV ISAIAHADDPYEAAEEFKNLVDNIK >gi|292596534|gb|ADCV01000014.1| GENE 9 8570 - 9115 906 181 aa, chain - ## HITS:1 COG:FN0455 KEGG:ns NR:ns ## COG: FN0455 COG1592 # Protein_GI_number: 19703790 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Fusobacterium nucleatum # 3 176 2 174 179 170 55.0 1e-42 MAELKGSNTEKNLQAAFAGESQAFQKYTFYASAARKAGMNEIADYFEETAHNESAHAKLW FKALHGGDISADIEANLRDAAAGENYEHTTMYKEFADEAEKEGFAKIAFQMREVGKIEAR HEARYLALAAQVSGNKVFHNDEPVAWICANCGYVHVGEEAPKICPVCAHPQAFFHRFVES I >gi|292596534|gb|ADCV01000014.1| GENE 10 9866 - 10069 209 67 aa, chain + ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 10 66 9 65 65 65 47.0 2e-11 MAFVRYYVGDVVKMKKSHPCGSDEWEVKRIGTDFLIVCNGCGHQLLMPRPKFEKAVKKII SRLPENE >gi|292596534|gb|ADCV01000014.1| GENE 11 10079 - 11110 1309 343 aa, chain + ## HITS:1 COG:SMa0028 KEGG:ns NR:ns ## COG: SMa0028 COG0709 # Protein_GI_number: 16262467 # Func_class: E Amino acid transport and metabolism # Function: Selenophosphate synthase # Organism: Sinorhizobium meliloti # 3 333 7 340 349 246 42.0 4e-65 MVRLTDYVTSGGCACKIGPHILNRVLKALTPVTNEHVLADMTGADDAGVYQISDTFALVQ TLDFFTPMVNDPGLFGKIAAANALSDVYAMGGTPLTAMNIVGFPVPLVEQGVLTDVLNGA GSIVAEAGAAIVGGHSIENKEPIFGMSVTGQVNPHQIWKNKGAQVGDVLVLTKRIGTGIM NNALKADLFPVGTEQAVTSMSTLNRVAAEVAHNFTVHACTDVTGFSLMGHSVEMASASNV TIHIKVYDIPLFDDVIEAAQMGLIPAASYGNRKAITEVQVDEDLDPIWSDIVFDPQTSGG LLFSVPASEGEPLVQAFHKAGIDCAAIVGTVESFSGLAVRVTE >gi|292596534|gb|ADCV01000014.1| GENE 12 11281 - 11880 694 199 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0319 NR:ns ## KEGG: Vpar_0319 # Name: not_defined # Def: SirA family protein # Organism: V.parvula # Pathway: not_defined # 1 199 1 199 199 364 91.0 1e-99 MSNTKELTVDVRGSLCPKPVIETKKVSDANPNAVIITIVDNEVSRDNVEKFGKSRGYGVG IRQDGKDFYLTMTPNANSVTEVSCEPMNYGNRVILMTKDYLGEGSEELGRNLMKTFWVCM LEADVKPSKIYFINSSVKMVVNDSVHLENIKKLAELGVEIAACGICLDYFGVKDKLGVGS ITNMYAITDAILGDNIVKL >gi|292596534|gb|ADCV01000014.1| GENE 13 12005 - 12262 371 85 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0320 NR:ns ## KEGG: Vpar_0320 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 84 1 84 85 150 92.0 1e-35 MENKKLLVVFTSYYFGDKADKVLTELEVPHQLMATPPELYDMCGLSIEIDPSIVEQVKVI LKEHKISTSGLFWYEKGELAVPYEA >gi|292596534|gb|ADCV01000014.1| GENE 14 12403 - 12930 741 175 aa, chain + ## HITS:1 COG:no KEGG:ETA_14530 NR:ns ## KEGG: ETA_14530 # Name: not_defined # Def: hypothetical protein # Organism: E.tasmaniensis # Pathway: not_defined # 5 172 1 168 171 207 55.0 2e-52 MNTTMNAINWPKEYLPGLTDNYVSNEVIVKGITVEAVWEYLTNAATWPSYYSNSSDIKML NQEDTHLISNTRFFFKTFGFPVDAEVVEYVAPSENQPGRISWHGWAGEVGTAERLDVIHA WLVEELDYGVVRILTQETQVGEPAKELHIAKPNPMLNGHQDWLDGLVSAAKSVNK >gi|292596534|gb|ADCV01000014.1| GENE 15 12987 - 13313 359 108 aa, chain + ## HITS:1 COG:CAC1483 KEGG:ns NR:ns ## COG: CAC1483 COG1733 # Protein_GI_number: 15894762 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 102 5 102 108 134 59.0 4e-32 MEEKLFNCPVEASLSVVGGKYKSIILYHLMTDRTLRFNEIQKLIPQATIKMLSQQLKDLE AEGIIHKEIYPVVPPKTEYSITEFGETLRPIIMAMCDWGRIYKGDMIK >gi|292596534|gb|ADCV01000014.1| GENE 16 13354 - 14061 1086 235 aa, chain + ## HITS:1 COG:BS_yfkO KEGG:ns NR:ns ## COG: BS_yfkO COG0778 # Protein_GI_number: 16077850 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Bacillus subtilis # 24 235 11 221 221 186 46.0 3e-47 MSKYEIENVKLTAPKFDRKDLEYAMTYRYACKKFDSTKKISDDDWQGILTAARLSPTSLG FEAYQLLVIQNPEIREKMKSYGWGIQAGLEARHFVVFLTRKKVDLEFDSPYVRYIQEEVK QLPAEVDAIYKEKYAQFTTEDYKTFESDRAAFDWSSKQAYIVMANMMTMAAYEGLDSCAL EGFNQDKMTAFLGDELGLFDTKHFGIAVMAAFGYRDEEPHRNKTRRTMDEIVTVV >gi|292596534|gb|ADCV01000014.1| GENE 17 14218 - 14457 389 79 aa, chain + ## HITS:1 COG:L67002 KEGG:ns NR:ns ## COG: L67002 COG2261 # Protein_GI_number: 15673224 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 1 77 1 77 80 70 75.0 8e-13 MLWSIIVGGFIGFLAGAITNKGGAMGVIANVIAGLVGSSVGQAIFGTWGPSLAGMALIPS VLGAVIVVAVVSFFFGKKG >gi|292596534|gb|ADCV01000014.1| GENE 18 14522 - 14758 460 78 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0323 NR:ns ## KEGG: Vpar_0323 # Name: not_defined # Def: CsbD family protein # Organism: V.parvula # Pathway: not_defined # 1 78 1 78 78 77 94.0 1e-13 MALEDKLNQAKGALKENAGKLTDNKELQAEGAVENTAAKVKEAAHDVAEDLKKAAEDVKD AVDGAISGVKNVLHKDDK >gi|292596534|gb|ADCV01000014.1| GENE 19 14837 - 15943 1814 368 aa, chain - ## HITS:1 COG:BH4051 KEGG:ns NR:ns ## COG: BH4051 COG0012 # Protein_GI_number: 15616613 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Bacillus halodurans # 5 368 3 366 366 459 64.0 1e-129 MSTNLEVGIVGLPNVGKSTLFNAITKAGAEAANYPFCTIEPNVGVVDVPDNRLAVLAEMF GSKRILPAAMRFVDIAGLVEGASKGEGLGNKFLSHIRQVDAIAQVIRCFDDPNITHVSGS IDPIRDIEIINTELCLADLESVEKRKQRIEKIAKSGDKDARAELPLLERIIEGLGEAKPV RAQGLEEEELEMIKELTLLTAKPSLYVANISEDEVSDYSSNEYVKRVEEYAKNEGAGIVV VSARIESEIAELSDEESAAFLEDLGLEESGLTKLIKASYALLGLINYFTAGEMEARAWTI VNGTKAPQAAGKIHSDIEKGFIRAEIVSFDDLQACGSQNAAKEKGLVRLEGKDYVMKDGD VTHFRFNV >gi|292596534|gb|ADCV01000014.1| GENE 20 16297 - 17469 1049 390 aa, chain + ## HITS:1 COG:CAC0877 KEGG:ns NR:ns ## COG: CAC0877 COG2230 # Protein_GI_number: 15894164 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Clostridium acetobutylicum # 3 390 4 388 391 332 46.0 8e-91 MFSKLFDSFLVHYLERFNDHCFTVKIGDNEYTIVDGESEFTVIVNRDIPKKDLLISAELA LGEAYMRKDIEIEGDLFKALCVVLGHVGKDSINRKVLSSLFNAGLKKKDQKQQVSSHYDL GNEFYKLWLDETMSYSCAYFKHENDSLKDAQYQKVHHILDKLYLKEGMTLLDIGCGWGFL LIEAARKYGVKGYGCTLSEEQWKKGQERIKEYGLEGQVEIELIDYRDVAASGRTFDRIVS IGMLEHVGRPNFPLYMEDASDMLKDGGLFLLHYISDPSEKETSAWIRKYIFPGGCLPSLR EMVSLAYDYDMNVIDVESLRYHYYKTLMHWYNNFQGVREQVEAKRGSEFVRMWDLYLCGC AAGFYIGNMDLHQILMTKGVTNELPLTRWY >gi|292596534|gb|ADCV01000014.1| GENE 21 17640 - 18416 423 258 aa, chain - ## HITS:1 COG:FN0307 KEGG:ns NR:ns ## COG: FN0307 COG1120 # Protein_GI_number: 19703652 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Fusobacterium nucleatum # 1 253 4 257 264 245 47.0 6e-65 MIFELRNGSFAYNKKDYIFKDISFTIKSGEILTILGRNGIGKTTLVKCISRIQQLQEGNI YINNKLVSPHDNAPIGYVPQARELSFPYTVEEIVLMGRSRHIGMFSVPTDKDYEIVHSVL KRIGISSLASKTASSLSGGQLQLAFIARALASEPQLLIMDEPESYLDFKNQYTMLSLIRN IVDESNLACIMNTHYPDHALQISDKTLMLKPNNYILGTTKNTVTENNLNDFFDVRTKIIV GKEDNKSYSGFIVLGTKE >gi|292596534|gb|ADCV01000014.1| GENE 22 18413 - 19420 338 335 aa, chain - ## HITS:1 COG:FN0306 KEGG:ns NR:ns ## COG: FN0306 COG0609 # Protein_GI_number: 19703651 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Fusobacterium nucleatum # 14 331 13 331 333 328 58.0 1e-89 MKSQNKYLVIFFCLLVFLALTVLISLMTGRYMLMPTQVINILSNGSSAAAFDMESAVIWN LRIPRILLNILVGGALAIAGTVFQGIFRNPLVSPDILGVSSGAAFGAALGILISGINIYA TGFALIFGIASVCLTYSLARLRNQITSLSLVLSGMIVSAIFGALIALIKYVADPYDKLPA ITYWLMGSFSTASYENVSLVSIPIIFGCAVLYFLRWKINILSMGDEEATALGVNPFKLRL IIIAMATLITAACVTITGIIGWVGLVIPHICRMLIGVDHQKLLPISIIVGAIFMIIVDLI ARSAIAAEIPIGIITALVGAPFFACLFYRTRGDWK >gi|292596534|gb|ADCV01000014.1| GENE 23 19434 - 20534 821 366 aa, chain - ## HITS:1 COG:FN0305 KEGG:ns NR:ns ## COG: FN0305 COG0614 # Protein_GI_number: 19703650 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 36 361 4 331 336 391 60.0 1e-108 MKMKNFIHNSLIAGLLICPLLFAGCTNSVGPNDKPNDNIKVVTDLTGTDVSMKKEINRIA IVPIPWTSIVYAVDGSDKKIVGIHPSAKKSYEASIFKTLAPDLENVNSLFVDNNFNVNFE EVAKLKPDVVIIWDYQPEVAKKLKELGIPAVSIKYGTLEDIQNGIRLLGKILDKPEQAEA LISYHKDSEAYFKQKNASALPNKPKVLYLQNKNLTVAGNKSVNQLMITMTGGENAAKDTK GSWTKVSMEEIMTWNPDIIILSNFDSITPDDIYQDKLEGQNWSNIKAVKNHRVYKAPMGI YRWDAPNVETPLMMKWMGQLIQPDTFNDYILRDDLKQFYNTFYHYNLTDSEINTILNISI NNTPTF >gi|292596534|gb|ADCV01000014.1| GENE 24 20738 - 21709 1319 323 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0329 NR:ns ## KEGG: Vpar_0329 # Name: not_defined # Def: diaminopimelate dehydrogenase # Organism: V.parvula # Pathway: Lysine biosynthesis [PATH:vpr00300] # 1 323 1 323 323 670 98.0 0 MNIRIGIVGYGNLARGVEASVQLQPDMELIGVFSRRQGIETVSGVPTYTMEDIPNFKGKI DVMVLCGGSATDLIEQTPMVTKYFNCIDSFDTHARIPEHFANVDKVAKEAKTATLISCGW DPGMFSLQRVYAEAILPKGKSYTFWGRGVSQGHSDAIRRIDGVLDARQYTVPKEQYLEAI RNGETPDVDGYKGHLRECYVVAAPDADKAKIENEIKTMENYFVGYETVVNFISQEELDRD HKGIPHGGFVLRSGESTEGTRHVIEYSLKLDSNPEFTGSALVAYARGLYRLAKHGGTGCY TVFDIPPAWISTQSAEELRAHSL >gi|292596534|gb|ADCV01000014.1| GENE 25 22001 - 24223 2976 740 aa, chain + ## HITS:1 COG:ycgV_2 KEGG:ns NR:ns ## COG: ycgV_2 COG3468 # Protein_GI_number: 16129165 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Escherichia coli K12 # 466 673 136 352 413 67 28.0 7e-11 MRRNVKAAVIAALIVTGANAFTMVSATTVESHTDGKSIGLNLWGEKRHYTDDLTVNVSGL GVNGTKYHNNVTGIYALDGTQVAIDKNVTVTVKNPAPAESGAKRRPDLAHYYMSGIYAGY GGLTNDGNNDDTRITVKGNAKVDAVGVGLQANKDGYIRILGGADVKTYPLDTSDTYSALS EEGFVYVNTGMDGLHPGTNDVKMYGNIGFLDKNYGIDKNPHNHGSEISLGLTTPNSKLVG GVLNEFDESNNNPYHGGLRLYLQNGATWRNEWLGAERVYPTQGRPNNANYLYTGSRVEHF IGGKDINSQGIIQAVDPRPITINNYAGHAAIDYEKGAPATAQGKGKVVINHADKGSSVTM RSSADALKGSVNVDNPRGTLQQLANKLTYTGFTKGERNLNVNVQVDSGLISPAYSTKLGT DSFTVDGKPSITDQAVVTARESEVVSGAKSAVASSVMQMRADTNDLQRRLGDVRLNSNKH GVWGKYIGGKSKITDSAYVNQTYNMAQVGYDTLRGDWTIGGALLYGTSNSDYALGSGSGK TAGLALYGAKQYNDGRYLDVIGKVSRLKNDFTVRNSLGTSLSGDYRNTGTSLSVEYGKRI KKDNGFYIDPNAELTLSRLSGVSFDASTNTGSTVHINSDAVNSVIGRIGVGIGKESKNSN LFLKAALAHEFSGKMKATYSMTGEPTTGSEVNLKDTWLDVELGGSWSVRPNTYIYGTFTK NFGAIVDNSYRIDAGIRHNF >gi|292596534|gb|ADCV01000014.1| GENE 26 24477 - 25706 1618 409 aa, chain - ## HITS:1 COG:MTH52 KEGG:ns NR:ns ## COG: MTH52 COG0436 # Protein_GI_number: 15678081 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Methanothermobacter thermautotrophicus # 1 409 1 410 410 519 59.0 1e-147 MANINENYLNLQGSYLFANIAKKVNEYQTAHPDADIIRLGIGDVTLPLAPAIIDAMSKAV QEMGKAETFRGYGPEQGYDFLRQAIIDGDYKPLGVDIAIDEVFVSDGAKSDVGNIQELFS EDNIIAITDPVYPVYLDSNVMGGRTGEAVEGIFQKVVYLPTYAQNNFSPEFPSERVDIVY LCSPNNPTGTVLSRARLAEWIKWCKDNDAILMFDSAYEAFISTEDTVKSIYEIEGAREVA IEFRSFSKTAGFTGTRCAYAVVPKEVTGKTKSGERQPLNPMWNRRQCTKFNGVPYIIQRG AEAVYTKEGREQTRANIAYYKENARIIKEGLESIGLTVYGGVDAPYIWLKTPGNMTSWEL FDILLEQVQIVSTPGSGFGPHGEGYLRLTAFGSRENTIRAVERIKTLQF >gi|292596534|gb|ADCV01000014.1| GENE 27 26044 - 27126 875 360 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0333 NR:ns ## KEGG: Vpar_0333 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 358 1 337 341 422 65.0 1e-116 MLKSKEVYEFICKGINRKDKFDEFETLFGQSKNDTTEDTVNIKKVKQKDNDGDIKRFAAN FYKASIVNYKGYVQGTSQADKNRYSEVIASTLLSKNLLSAWTDLKPVRPNHFDTNHSPSK IVDMKKLQGTNRKEEILAKLLFYQREVDGLGYIFDYQTPLKVTQNDSYGKIDLLGYNQDD ECYSVIELKYRPSGSEETLLRCVLEAYTYYKLLDIKQIESAVSHDGIQDLKKLPEYKYTN EAELVILFDEKSCTKDDGGIETNLMLRIDSKAVTEDSYPSKTVVSQQFKECKELIDSGKR KQLRNLCENILKQEPELKQIRFVVLQAQKVSKAPYKNKVDNWSESLDRLYRAETLLTISK >gi|292596534|gb|ADCV01000014.1| GENE 28 27136 - 28311 529 391 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0334 NR:ns ## KEGG: Vpar_0334 # Name: not_defined # Def: beta-lactamase domain protein # Organism: V.parvula # Pathway: not_defined # 1 391 1 391 391 660 81.0 0 MNIVVHRGTHQIGGSAIEISTASTCIMLDFGNELSLDEKYTPINLDIDGVTKGKPDCDGI VISHYHMDHLGQLTSTIPDVPLYMGELSKEIALIGAEYQDKDLYLRLLGANTFRGGEAFS IGDIRIRPLVIDHSAIDSYMFVVEAGGKRILYTGDFRMHGLRHHVLDKLVNTYIGEVDVL ITEGTSLSRDADDCISEAAVLDDISSYIQDGKYVFVMCSSTNIDRIMGIWQNMPTDKVLI CDAYQKRILDTVINNVYYESSLYRRHDSPLVIDKGMYPKYYMEHGFVSLVRGTENFISKI KEFPKDDVRIIYSMWIGYIEENLALKELLDTYSSYICHASGHVSKDDLVQFIEMVDPDIV IQVHTDIPEKLKRILPNRNVYVVDDKEPFII >gi|292596534|gb|ADCV01000014.1| GENE 29 28589 - 29818 1081 409 aa, chain + ## HITS:1 COG:RSc0216 KEGG:ns NR:ns ## COG: RSc0216 COG0477 # Protein_GI_number: 17544935 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 24 389 14 381 409 266 43.0 8e-71 MNTYYSAILYESGVFMLTISNKGWLFTSILSALMAFTSLSTDIYLPAMPEMGRDLNGDAE LTLTGFLIGFALAQLFWGAVSDKIGRKKPLIIGIVLFSIGSVGCALSSSMMELLAWRVFQ AFGACVGPMLSRAMIRDLYGRTEAAKMLSTLAIVMAIAPIAGPMLAGHLLVWYTWHSIFW LLVGIGLLMLVAVLVLPETHPVEKRSKKSIGHTYNNYWILLRNKGFMKYTLCVSSFYIAI YAFLTGSPYVYIDVYEVPKEYFGYLFSVNIIGVMLLSAINRRIVSAIRLDRLLKYATLFA AVCVSVVMGLMFLGYHSLWLIVIGCFLFFSMNGIIAAVTNALALDRAGRMAGSGAALLGA MQYGSGIVSSLILTFLPNDTAYPMMGVIAIFVIICAIIAFPEDEKYNRI >gi|292596534|gb|ADCV01000014.1| GENE 30 29961 - 30245 471 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372738|ref|ZP_03856218.1| SSU ribosomal protein S6P [Veillonella parvula DSM 2008] # 1 94 1 94 94 186 100 6e-46 MNKYEVMFIVKPAEEEATNAVIEKVEALIARVGGTVEKVDRWGKRRLAYAVKKFTDGFYV LINFEAAPAEIKEIDRVLKINDEVLRHLIVKHEA >gi|292596534|gb|ADCV01000014.1| GENE 31 30265 - 30663 425 132 aa, chain + ## HITS:1 COG:VC0397 KEGG:ns NR:ns ## COG: VC0397 COG0629 # Protein_GI_number: 15640424 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Vibrio cholerae # 1 97 6 103 177 98 51.0 3e-21 MNSVQILGNLARDPEVRYTKTGRAVATFTVAATNTYIDSTTNETKEQTAFINCVAWGKLG EAAGNLRKGSRCFVEGRLQTRSYETQDGQKRYVTEVVANFVGQSLDMNTNSFEGGSNFDS FSTGGDDENIPF >gi|292596534|gb|ADCV01000014.1| GENE 32 30703 - 30933 394 76 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372736|ref|ZP_03856216.1| SSU ribosomal protein S18P [Veillonella parvula DSM 2008] # 1 76 1 76 76 156 100 5e-37 MRRDRGRKPRRKVCVFCADHIDQIDYKDVAKLRRFTTERGKILPRRISGTCAKHQRKLTT SIKRARAIALLPFTAE >gi|292596534|gb|ADCV01000014.1| GENE 33 31359 - 32045 763 228 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0345 NR:ns ## KEGG: Vpar_0345 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 228 1 228 228 399 99.0 1e-110 MKRVLTLTLAVAIVAGGYMFEANGAGEQPSKQAPSISEINIYTPKELNARQKDLVEIGRY TASGDQGALKSVIASAIERGTLTPQEVSIAIRQLYSAAGLKQMNAALATFDQLRDERPEF GDEYEKLVPKQTGLSALLGNGTNGAPLTKPKAEETKEGVQYNTFRMKKPKPQNRNRSRLG KLDRELVAAAALGTRVGKNNLFTAAEKSLSELGLSQYQIENLEAMIFQ >gi|292596534|gb|ADCV01000014.1| GENE 34 32247 - 32906 861 219 aa, chain + ## HITS:1 COG:BS_ytmQ KEGG:ns NR:ns ## COG: BS_ytmQ COG0220 # Protein_GI_number: 16080042 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Bacillus subtilis # 1 209 1 208 213 199 46.0 5e-51 MRLRRKPWIDEAIHEYDSHIILSGQEEFKGKWRELFEHPEYPLYMELGTGKGRFIAGMSE AYPNANFVGFEVQMGVIYYAAQKIFEGERNNAKVSLFDIAGIEEIVAPGEVDRFYINFCD PWPKAKHAKRRLTYHTFLDRYARLLKDGGEVHFKTDNEGLFMFSLEEFKACGWELKNVTY DLHSTDLPNVKTEYEEKFSKKGQPIFRLEAIKPKVQKEA >gi|292596534|gb|ADCV01000014.1| GENE 35 32908 - 34233 1527 441 aa, chain + ## HITS:1 COG:BS_ylaO KEGG:ns NR:ns ## COG: BS_ylaO COG0772 # Protein_GI_number: 16078549 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Bacillus subtilis # 22 385 13 371 403 188 31.0 2e-47 MQTPNKGDSRWGSLFKNDLQGMLLPILLITIIGSVNIFSATYISSIYENTGLLGYFLKHM TFLFLSMAAGVILYRYDYRQLQKPHMLQRIMIATLIGMILVLVIGAVINGARRWIVIGPV SIQPSEFAKLAALIWTSAKLSTMRKWGKPKHTNPLINLQGYFSERISYMLPMLIWPIIFA GLIILQPDMGTTVLIFGFSFVLIYLAGFDGKFFGGAFVIAGFLGFIAARMSPYRWERIQS WFDPWPHAQDMGYQTVQGLLAVGSGGILGEGFMQGTSKYFYLPEAHTDFAFAVWAQEMGF VGAVFVVVLIAAFTYFGFRISNKARDEFGKWLAMGITLLISGQALFNIAMVCGIMPVTGV PLPFVSYGGSSLLMNFMAIGLLASIGRRNVEGVKQVGTAEPLPSLREETQSRFKPAATTR ANKTNMPGPFKPRPSKKSTRR >gi|292596534|gb|ADCV01000014.1| GENE 36 34362 - 35645 1027 427 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 1 409 1 418 447 400 47 1e-110 MKDYIDIQERPSWGRMLPLSFQHLFAMFGSTVLVPYLLKVDPATALFMNGIGTLLYLFVC KGKIPAYLGSSFAFIAPVAGVLSAGLGYEAAKGAFVVFGLSFVILSVLVRYIGTRWIDKL FPPAAMGAIVAIIGLELAPVAMSMSGLIGNQDLGMSHSQAVIISMFSLVVTLLGTVVFRG FLAVIPVLIGVVSGYVLSAVMGVVDFSGVEAAPWLSLPQFYGMPVFDINAIIMIMPALFV VFAEHVGHLVVTSNIVAKDLMKEPGLQRSLLGDGLANILSGFFGATPNTTYGENIGVLAI TRCFSVWVIGGAAVLAMIISFVGKVAALIHAIPVPVMGGVSILLFGIIAASGLRMLVERK VDYTNPVNMILTSVILVVGLSGAELAVGPVVLKGMGLATVVGMAMSICLLILQKTGVGND QLKKTEV >gi|292596534|gb|ADCV01000014.1| GENE 37 35843 - 36307 577 154 aa, chain + ## HITS:1 COG:BH1356 KEGG:ns NR:ns ## COG: BH1356 COG1030 # Protein_GI_number: 15613919 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane-bound serine protease (ClpP class) # Organism: Bacillus halodurans # 2 154 291 444 445 71 29.0 6e-13 MEFLIWMAIGVSLMAVELVVPGGILGLIGYCAFLWGVYVALGEGTVALYAVLGLTALLIV IIIVFFNHFEKTWIGKLFTLGQRSTTKAGYVSNDVLEDLAGKEGVAHTTLRPAGIAKING NLVDVVTEGDFIDAGSPIVVLRVVGGRNIVRKRD >gi|292596534|gb|ADCV01000014.1| GENE 38 36344 - 37300 1570 318 aa, chain + ## HITS:1 COG:BH1357 KEGG:ns NR:ns ## COG: BH1357 COG4864 # Protein_GI_number: 15613920 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 315 3 317 331 415 72.0 1e-116 MDVGILILIPILLIGIMVFLYVVPLGLWVSALAAGVNVGIFTLVGMRLRRVNPSQIVMPL IKANKAGLDVNVNQLEAHYLAGGDVDRVVDALIAAERASIPLTFERSAAIDLAGRDVLEA VQMSVNPKVIETPIISAVAKNGIELKVRARVTVRANIDRLVGGAGEATIIARVGEGIVTT VGSSEEHTDVLENPDHISRTVLGKGLDAGTAFEILSIDIADVDVGRNIGAQLQTDQAEAD KKIAQARAEERRAMAVATEQEMRAKTQDMQAKVVEAQAEVPKALAEAFRNGNLGVMDYYN MNNIIADTKMRENLADGE >gi|292596534|gb|ADCV01000014.1| GENE 39 37309 - 37965 673 218 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0351 NR:ns ## KEGG: Vpar_0351 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 218 1 218 218 326 96.0 3e-88 MDSILSSVLSIFSHNPIFVLGIIAYIAFSIIKNKNTEESEEYDEYESSGGGTWEDMEREY GISIERKVDEPSMEDLSKVDDFYQDSYEDKPIVNQQPEPPSQTMEDIHFNEEAAAAQRDI EALSMKSSSSTPSYTTSKTRLDREAVTGPTLSERLAEFKRDKAAKEGQVLVENVGITTAP TALAATSTRGRKSNHALKEGMKWSIILSKPKALERRYR >gi|292596534|gb|ADCV01000014.1| GENE 40 38219 - 38950 503 243 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0352 NR:ns ## KEGG: Vpar_0352 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 243 1 243 243 461 97.0 1e-128 MYRNVRVIPKQLLQQLYIEKQWSVRDVADYFQCSVDTIMRRMKAYDIERRPLKKEINMVH VQALYETGKWSLHSLAKRYDVSITTMANRLKEYGLVCQQSNKNVSIDVVRICRAYKSGNS TDAIARMYGISRWKVHHVLRHMGNCLLPKARKPMRVEEMAYLYIHHHMSTDDIGLAYGIR GSTVAMYLREQGIEIRANTLDLDENKIKKLRAQGYGVAKIAQVMGCSTSAVRKRLAMKKY ISP >gi|292596534|gb|ADCV01000014.1| GENE 41 39005 - 39943 1068 312 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0353 NR:ns ## KEGG: Vpar_0353 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 312 1 312 312 528 98.0 1e-149 MLEIISALTPFLLLGLVAAGLSRLSGVALSMVVVPTLLIWGATAVDVIAFMLLFVVYNNF TMETQDIRLDYKDLVLFPKWRLCIPFILSLVSAFFVPAAGIAVFMACFVLELLATVYKRI PENKRPRLQRVIVASILSAVVTAVGAYIGPKIPSEFYFVCVGLAILIVTDFAWYAGKHRD AFRSAWDSIWAGFNIFLGMFGVEASYYPAALTRSIPNPMDRMLPMVTVVGGYAGLMVVFG FYNIFSIPSLITAIGAAIGIRLFGMYEFPRNGSFSYLAIGFAVAAVICLYLVSPTPVGFD HINTLVSQPIGQ >gi|292596534|gb|ADCV01000014.1| GENE 42 40092 - 40685 670 197 aa, chain + ## HITS:1 COG:NMB0698 KEGG:ns NR:ns ## COG: NMB0698 COG3663 # Protein_GI_number: 15676596 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Neisseria meningitidis MC58 # 5 197 35 227 229 275 71.0 3e-74 MAETIETRPFPPFLPKKATVMMMGTFPPEQSKRAMEFHYPNFQNDMWRVFGLVFFDEKDH FRNGEEKAMDPEKIKAFLSEAGIASCPTVLKAIREKGNASDAFLKVVEPVPLADVLEQIP DCKHIGTTGGKATEILLSLLPEKVKLPKTGETIPFVFNGRELTLTRLPSTSRAYPLSLPK KAEAYKNFFKACGLKTK >gi|292596534|gb|ADCV01000014.1| GENE 43 40945 - 42195 1328 416 aa, chain + ## HITS:1 COG:lin1217 KEGG:ns NR:ns ## COG: lin1217 COG0477 # Protein_GI_number: 16800286 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 5 402 2 400 401 317 46.0 2e-86 MDKAKDALWTKSFVLDTLINFLVFLIYYLLIVIIAVVAKDNLHATASQAGLAVGIYIIGT VVARLLAGRFISILGCRKMLYLGLLIYLISTAMYFYTPNLLMLDSVRFLNGFAYGITSTA TSTIIAAIIPTSRRGEGINYYGLSTSLAAAVGPFLGILMLHSLGYDFIIAFCVALIILCG IGSVIMKFNEPKLGIESEAHKGIRISDYIEPRMNSISLVSILVGFAYSGVIGFMAAYTKD LDLIMAGTFFFVVYAVVITITRPLLGIVFDMKGENFVLYPCFVSLALGIFLLSIAHSTWL VLLSAVFVGLGYGTFMSNGQAVTVKIVPVHRIGVATSTYFIALDMGLGFGPYILGAVKEV VGYTSMFHVTVVVALLALVAYYLLYGRYVGTERDLSLKARAEEEEIRNRKRNNKLA >gi|292596534|gb|ADCV01000014.1| GENE 44 42273 - 43496 1523 407 aa, chain - ## HITS:1 COG:FN0733 KEGG:ns NR:ns ## COG: FN0733 COG2195 # Protein_GI_number: 19704068 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 3 405 8 408 412 449 56.0 1e-126 MESMVERFVHYTSINTRSNEESTTIPSTQTQVDFATNVLVPDLKAIGLDEVIYNRENGFV IGTLHSNTDEKAPSIGFIAHMDTADYNAENIKPRIVENYDGSDICLNEEHQIFTRRADFP NLKNYIGKSLVVTDGLTLLGGDDKAGICEIMEALTYLVAHPEIKHGKIMCAFGPDEEIGT GADHFDVKQFPVDYAYTIDGESLGQLEYETFNAAGGTVTLKGVSVHTGTAKGIMINCAKL AMQFDALLPGAAVPEYTCGRQGFFMLMSMETQVDTGKMNYIIRDHDKELFEAKKAFFLQA GQTLNEIYGREVCEVSVKDQYYNMYDVIKDNMECVNVAKAAMEKAGITPICDPIRGGTDG SKISFMGIPTPNIFTGVENLHGRHEFACIDDMKKAVEVIVNIVNIEK >gi|292596534|gb|ADCV01000014.1| GENE 45 43746 - 45683 2332 645 aa, chain + ## HITS:1 COG:PH0361 KEGG:ns NR:ns ## COG: PH0361 COG1297 # Protein_GI_number: 14590271 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrococcus horikoshii # 12 604 4 595 626 208 30.0 3e-53 MSDEVRSIPPIEPVLDPKKDYVEINSYVVFWGLFYAAVFTLAVGYLCLKIGQTVDAFAPV SVLAMGTAVILKRQNAFAETVHIQAIASSSTNTLAGAMFFLPALYIWNVTDVSFVQMAIP IILGGVLGVLLCVMFRRYFVEEMHYVYPFPSGRAAAEVLMSNEGSKAKLMLGSGLIALVY DFILNSLGWWQEVIRTATFKWGAALADQTKLTAAVDTDAALLGLGYFTGLRYAAIIAAGS FFSWFVCIPIVYYLAPEHIMQIGGHAVPLGEAPIRKVFLDYVRHIGIGMLAMAGIIGLIT MSKVVANVVKNAVLDIFSSKTVDVNLLRTQRDVPTSWIGAGILLCTVLFAAYFHFMYAES FGQTIVAFLIVLIMSFLLSVVGISSIAYTGTEPVSGMTIFMIIISAVCLTAAGMTGKVGM IAVLMMASFIGTTIGMAGNFMSELKVAHMTGATPKKMEQWQIVGTILCAVLSVGVMILLN DAYGFVGDHALNAPQANAMAAIIEPMMTGGSAQWPLYMAGALFAIILWMVRVPPLAFALG TYLPMEINTPLLIGGLIAYLVQNSTKDKELADLRFSKGSTIASGLVAGGAIGSLFSAVLR IAGVDVFAQAWVETPEATYLSIVMYLLLCTFLYKVAMYIKAKHAK >gi|292596534|gb|ADCV01000014.1| GENE 46 46035 - 46820 977 261 aa, chain + ## HITS:1 COG:alr3187_1 KEGG:ns NR:ns ## COG: alr3187_1 COG0834 # Protein_GI_number: 17230679 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Nostoc sp. PCC 7120 # 19 257 18 254 261 182 42.0 4e-46 MKFKKIAALLGAFTIASSLLIAGCGNAGNSQKAWRVGTDATYAPFGFKDKDSGKLAGFDI DIINAIANEEGIEADIQNLNFDALLPALQSNTIDIAISDMTISEERAKSVDFSKPYYIAG NGLVVNIDNTNINSFKDLEGKRIGVSIGSTGAEIASKIPNADVRQFNIIVDAFLELQNKG VDVVINDTPVNEYYVNGKGKGIAKVTGEDYDAAPLGIAVKKGNTELLNKINDGLAKIKAN GKYAEIYKKWFGKEPPAEVLK >gi|292596534|gb|ADCV01000014.1| GENE 47 46897 - 47922 1133 341 aa, chain + ## HITS:1 COG:BS_ybgG KEGG:ns NR:ns ## COG: BS_ybgG COG2040 # Protein_GI_number: 16077310 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Bacillus subtilis # 21 336 14 306 315 265 44.0 7e-71 MGDMMAKRSAFLDIIKEKGALVLDGALGTELERYGCDIQHKLWSAKVLMDQPDIIKKIHI SYLAAGADIIQSSGYQATVAGFKGLGYGTEEAIELVKLSVRLAVQARNEFLEAKASGALT LRGITLGEETPKGIRYFSEGALPKPLVAASVGPYGAFLADGSEYRGYPDVQTEYLEVFHI PRLALFCEENPDILSFETIPSYAEAIAIARAMSDPFTSKGIPAWIAFSCKDGHHVSSGET IIKCAQMIDKVHPITGIGINCSKPEYVESLIKDIRTVTDKPIAVYPNLGESYDSKTKTWY GDAASFVDYVEVWRKAGAEIIGGCCRTTPEIIGDIAKKIHN >gi|292596534|gb|ADCV01000014.1| GENE 48 48327 - 49562 1374 411 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 402 1 403 405 371 43.0 1e-102 MHCAQKMTHNIYWIGSNDWTTERFENLFPIPNGVSYNSYFIDDEKTCVVDSVDAEIREEY FDNLTHLLNGRELDYIVVNHMEPDHCQTLLETLERYPNCKMVGNATTFRMFEQFYNTPKP EQYHQIKEGDEICLGKHTLVSYTMPMVHWPEVTCTYEKSTGTLFSADAFGTFGTVNGNIF ADQTDFVATYEEEARRYYTNIVGKYGPQVQNALRKISSLDIKRIAPLHGPIWRTPESIQY ITHKYLHWSSYTAEKKGVVIAFGSMYGNTRAIAQQLAKQLSKRGVTDIRIYDVSKTNASY IISDAWKYTNLVTIAPTYNLNLYLTMENFIHELKALNFQNHKVSIIGNHSWASAAMKTMV SHFENDFKDIEIVSEPLDIKSSLKEEDLPLFEKMADDIKASIEAAEIKDVF >gi|292596534|gb|ADCV01000014.1| GENE 49 49728 - 53468 4596 1246 aa, chain - ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 3 953 5 958 985 1055 55.0 0 MAIQRLFVTKRESFNLEAQRMLQTLQQELSMPATAVTIYERYDIENLDAKDLESAKNLIF SEPPVDTVLEKIPNVQGFVFAVEYVPGQYDQRADSAEQCISMLTLTSGHIVRCARVYAIE GTFTKEQENTIKAYYINPVDSREASLDVPNTLALDLEDPKPVATIDGFTTMSDDDLEALI KNYSLAMTLADLQMIRQQYAEVEHRDPTITEIRLFDTYWSDHCRHTTFMTELTDITIEDS RFTGSIKEALEEYMEGRAELYTTKKKARSLMDMATLAVKELRHAGGLTNLDESDEINACT IIVPVDVNGKTEEWLLLFKNETHNHPTEIEPFGGAATCLGGCIRDPLSGRAYVYQAMRIT GSGDPHTRLEDTLEGKLPQRKITQEAARGYSSYGNQIGLATGEVKEYYHPGYVAKRMEIG AVIGAAPRNQVRREVPVAGDVVVLLGGKTGRDGCGGATGSSKEHTVESLSTCGAEVQKGN ALTERKIQRLFRRGEVTTLIKRCNDFGAGGVSVAIGELTDGVSINLDLVPKKYAGLDGTE LAISESQERMACVIDASDVEAFKAYCDEENLECTVVAEVTDTNRLVMNWNGEAIVDISRD FLNTNGANQQQEAIVKAPTDRSYFLRGSASADNFKEKWLAAVSDLNAASQQGLAERFDST VGANTVLMPFGGKFQKTPTQGMVAKLPVLNGETTTASIMTHGFVPELSAWSPYHGAQYAV LLSVAKLVALGGRREDAYLTLQEYFERLNSKESWGKPVAALLGAYKAQKELEIGAIGGKD SMSGTFMDLTVPPTLVSFAVGTAHVDNIVSQDLKGVDHRLVFFDVPRTYDDTPDWDRFKE NCDTLQEQIEKGRVYSAYVVDQGGIPEAVTKMALGNNIGVKFDKYAERGIFQPALGSFIV EVDITAVNYLLELPDVKVIGVTQATPVIEWEGQSVSLKEIQAAYEAPLNDIFPMHAPNSF GEAVAYIHDQHAKPRSASLGAKPKVLIPVFPGTNCEFDSARAFERAGAETDIVLIRNQTP EQLKESIDVIKAKLAESQILMFPGGFSAGDEPDGSGKFIATLFRNPYLAEGLENLLYKQD GLVLGICNGFQALIKLGLLPGGHIETLTADHPTLTYNTIGRHLSRMVNTKVISTKSPWMS DAKAGEIYTVPISHGEGRFIASPQQVLEFNKTGQIATQYVDFDGIASMDSRFNPNQSVAA IEGIYSPDGRVFGKMAHSERCGAGISKNIPGQLEMPIFTSGVKYFK >gi|292596534|gb|ADCV01000014.1| GENE 50 53736 - 54641 1228 301 aa, chain + ## HITS:1 COG:BH2712 KEGG:ns NR:ns ## COG: BH2712 COG0583 # Protein_GI_number: 15615275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 6 286 4 285 296 103 25.0 5e-22 MAVSADLYRTFLGVGLYLSFSRAAKELGVSQSAISQSIKQLEGELNMPLFVRTTKSVGFT PEGKELFDTVAKAFSILDNGVTQLQERVSQAYESLNLAATDTLCRHFLLPYFHKWQLQES EIGLHIINRPSPDCVELVLNKEAQLAVVNDYEGLRDNPQLEVTTLATIQDVFVGGPDYKG AGFFDQGRLLNEPILLLHKGSASRTFFDDVTHGACRKPRFELGSVDVLLDLVEINMGISM LPNHVVQQKMQEGTIVRIDTDIPVPTRDIVLVRSRLVPQSEGAARFTSLLVNRESTRDKV L >gi|292596534|gb|ADCV01000014.1| GENE 51 54896 - 55471 838 191 aa, chain + ## HITS:1 COG:BH1514 KEGG:ns NR:ns ## COG: BH1514 COG0503 # Protein_GI_number: 15614077 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Bacillus halodurans # 1 191 1 191 198 211 54.0 8e-55 MELLKERIREEGIVLNNRVLKVDGFLNHQIDPQLFKAIGKEIADRYRDAGVQRIVTIEAS GIALALMAALELDVPLVFARKKKSILMVDDVYHSVVYSYTKEENYDITISKKFLPAGEKV LIIDDFLASGEAAMGLAKLVQDAGDEVVGMAIAIEKSFQPGRERLENAGYRVESLVRIKE FKDNGCVFIED >gi|292596534|gb|ADCV01000014.1| GENE 52 55499 - 55945 511 148 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0364 NR:ns ## KEGG: Vpar_0364 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 148 1 148 148 268 98.0 4e-71 MNKKAEKFDLLVADLNKGGNTWFTKEEMTDDLNTVVYHGRLDVHEHSLPVFIVVDDSAFT YVRIAITTTSIDEKVIPAVLKELNTLNQDYKVSKYYVSVEDNNIYMDVSMPCLNEQFDPT VVVNLLLEVIQPHLDAVHKDILKVAGLA >gi|292596534|gb|ADCV01000014.1| GENE 53 55957 - 56397 439 146 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0365 NR:ns ## KEGG: Vpar_0365 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 146 1 146 146 279 99.0 2e-74 MNPKSLLFDKFLKEEEIISFERKDFDDEDGTVVYRSYIKSPLWDMPLFVILDNSIYSVVR LVLGPEKVTAQNMNALNALINRDNATYKNYKLYIDEQDSSLYLDCVYMCGDDAFEPALMY ALMSSIVDYIPESVGELKAAFESGTH >gi|292596534|gb|ADCV01000014.1| GENE 54 56465 - 56653 65 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGYPLFYMDKQNHTNIMIDRINLCCYKIAKTVFYFADLFKLNLYDAIYLFIIVRNITNNK NI >gi|292596534|gb|ADCV01000014.1| GENE 55 56832 - 57323 664 163 aa, chain + ## HITS:1 COG:PH0320 KEGG:ns NR:ns ## COG: PH0320 COG0041 # Protein_GI_number: 14590237 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Pyrococcus horikoshii # 3 150 12 159 177 166 57.0 2e-41 MKVGIIMGSKSDLDTMKKASAVLDEFNIPYEMVIASAHRTPEAVKNFVTRLEDEGAIAFI AGAGAAAHLPGVVASFTTLPVIGIPLNATALKGIDSLLAIVQMPSGMPVATMAVDGAKNA ALFAVQIGAAFNKDLKEQYQQYRKDMAEKVLADNAELQGAIHI >gi|292596534|gb|ADCV01000014.1| GENE 56 57426 - 58154 1035 242 aa, chain + ## HITS:1 COG:DR0226 KEGG:ns NR:ns ## COG: DR0226 COG0152 # Protein_GI_number: 15805262 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Deinococcus radiodurans # 13 240 65 293 294 274 56.0 1e-73 MANIDLEKLTLLYEGKAKQVYATDNKDEYIVHYKDDATAFNGEKHDTILGKGVLNNKISS FFFELLKKEGVPTHFVRREDDRNQTVLTLKIVPLEVIVRNIAAGSMAKRFGIEEGTPLKH PILEFCYKNDELGDPFANESQITALGWATQEQLDVISTITLKVNDILKKFLATKNVTLVD FKVEFGTHNGEVLLGDEISPDTCRFWDATTGEKLDKDRFRRDLGNIEEAYKEMLFRLTGE RA >gi|292596534|gb|ADCV01000014.1| GENE 57 58166 - 59584 1333 472 aa, chain + ## HITS:1 COG:CAC1392 KEGG:ns NR:ns ## COG: CAC1392 COG0034 # Protein_GI_number: 15894671 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Clostridium acetobutylicum # 8 465 14 470 475 484 51.0 1e-136 MNYDSVFDKWHEECGVFGIYDRTVDVARYVYWGLFALQHRGQESAGIAVTDGHDVELKKG MGLLTEAIKELPSLPSYMGTGHVRYSTTGSNNPRNIQPLVIHYQGGQIAVAHNGNLTNAL SIRKRLEADGSIFQTTMDSEVIVNLIARSKAETQAERIADAARQIEGAFSLVITTNDSLV GVRDPQGFRPLCLGKTENGYVLSSESCAFDAIKAEFIRHIDPGEMVIIDDSGVRSTIYAE PEKIHKKLCVFEYIYFARGDSHIDGQSVYQSRLNMGRELYNETKYDADIVMSIPDSGTTA ALGYARASGIPFAEGLVKNRYSGRTFIKPNQEERELAVRMKLNALPHIVGGKRIVLIDDS IVRGTTSGIIVKMLKEAGAKEIYMCISSPTIEYSCHYGIDTSVRKELIAATHTVDEIRDF IKADRLHYLSREGLCRAVSDVKPDDLCFACFNGDYSVAVPADQEEGVKYVLE >gi|292596534|gb|ADCV01000014.1| GENE 58 59571 - 60632 869 353 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 1 341 1 337 354 339 50 4e-92 MCSNKTSLTYRDAGVDIDAGNRAVELMKESVKRTYTPGVVGDLGGFGGLYSLSGHDMSDP MLVSGTDGVGTKLRLAIMMDKHDTIGQDCVAMSVNDILVQGATPLFFLDYIAVGKLEPVK VADIVRGVAEACEESGCALLGGETAEMAGFYDDEDYDVAGFAVGIVDRPKLITGESIKAG DVILGLPSSGVHSNGFSLVRKIVFDHKQLSIDTEIPEFGKTLGEELLTPTRLYPKAVLPL IEQELIKGMVHITGGGFYENIPRVLPAGVTAEVDCDTWPRLPVFEKLQEWGNVDWHEMYR TFNMGIGMILIVDAADVDRVKANLESRNEAVYEIGHIVSGDGPVVVKGAVFND >gi|292596534|gb|ADCV01000014.1| GENE 59 60625 - 61248 685 207 aa, chain + ## HITS:1 COG:MA3522 KEGG:ns NR:ns ## COG: MA3522 COG0299 # Protein_GI_number: 20092330 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Methanosarcina acetivorans str.C2A # 9 203 18 212 216 193 48.0 2e-49 MTSSVAKKRLALFASGRGSNGEALYKAMQEGYINGEFVVIITDHGDAGIVERSKPWNIPL IVIERRDYDSKASFEQAQLDALEPYKVDGIVLAGYMRIVGTPLIEHYEHRILNIHPALLP SFPGLHGHQQAIDAGVKVTGCTVHFVDAGMDTGSIIMQNTVPLLPEDTEDTLSDRLLPIE HKTYKEALRLFCEDKLTIKGRVVYIDD >gi|292596534|gb|ADCV01000014.1| GENE 60 61273 - 62802 1917 509 aa, chain + ## HITS:1 COG:lin1877 KEGG:ns NR:ns ## COG: lin1877 COG0138 # Protein_GI_number: 16800943 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Listeria innocua # 2 509 1 509 509 573 60.0 1e-163 MIKNALLSVSDKTGIVDFAKGLVDLGVTIYSTGGTLKAITEAGIPAKSVESLTDFPEMMD GRVKTLHPKVHGGILAIRDNAEHQQAMAEHGIEPIDLVVVNLYPFRETIAKPNVSLEEAI ENIDIGGPTMVRSAAKNHAFVGIVVNPNHYDEILEMLKDQGELTKEYRFGLAKEAFAHTA SYDVAIANYMSGILNEGPTPPEYLSAYEKVTDLRYGENPHQQAAFYKEIGTAHGMGALKQ LHGKELSYNNIVDMEAAWNMVWEFTEPAACIIKHTNPCGAATAATLHDAYVNAYEADSVS AFGGIVALNREVDASTAEEMSKIFLEVIMAPAFTKEALEILEAKKNIRLIELSKPESGQV TVKKVSGGLLVQTEDDILEDRVNYKVVTTVQPTEEQWKALEFAWKLVKHVKSNAILISNE KRTLGVGAGQMNRVGSAKIALEQAGEAAKGAVLASDAFFPFGDTVETAAKHGIAAIIQPG GSIRDEESIKAADEAGIAMVFTNIRHFKH >gi|292596534|gb|ADCV01000014.1| GENE 61 62949 - 64211 1479 420 aa, chain + ## HITS:1 COG:BH0634 KEGG:ns NR:ns ## COG: BH0634 COG0151 # Protein_GI_number: 15613197 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Bacillus halodurans # 1 418 1 416 428 426 53.0 1e-119 MKVCVIGSGGREHALAWRLSISPSVTKVYAITGSAAMSDCAELVGIDWQQSDHLISFLKD NQVDLVVVGPEAPLVAGLADVINKAGIPVFGPSKAAAQLEGSKVFAKDLMKKYNIPTAAY GVFHKVDEAKAFIAQTGAPIVVKADGLAAGKGVVVAMTIDEANAAVEDMLSGNRFGDAGS TVVIEEFMEGEEASLLAFVDGKTVVPMIASQDHKRIFDGDKGPNTGGMGTYAPAPVLTDA LRDAAMKTILEPMVAAMEKEGMPYVGCLYAGLMITDEGPKVVEFNARFGDPETQVVLPLL DSDLGEIMMACAKGTLTSNMVKWKDSSAACVILASKGYPETSSKGDVISGDIKQYDTTIV FHSGTKLVGENYVTNGGRVLGVVGLGKDLRTALDRAYERIEHIDFEGMQYRTDIGAKAFK >gi|292596534|gb|ADCV01000014.1| GENE 62 64474 - 65616 970 380 aa, chain + ## HITS:1 COG:L0168 KEGG:ns NR:ns ## COG: L0168 COG1169 # Protein_GI_number: 15672714 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Lactococcus lactis # 1 380 26 404 404 381 49.0 1e-105 MIYNKEPLELNSPVAFWLNFPNEERVFWVDRQSDRIVVGAKRLAMVKDDEDRHNYAYVFY GDTFFENSKDPKWAGMGHEMIAFTHYYIVENGESFYLHSGESVPITDFEVPRVRHNYKET SDDKAAWDSLMNAIADGISSGEMTKVVSSREVQFTSETPYNVASILANLVDNNPNCFIFG YEKDGRTFVGASPEILVRHRGSEILSYALAGTAPKHGPNAWTKEQLLTDKKNLFEHNIVR DRIVDIMKSITPEVIIGETGIMELAHLYHLRTIITAKDSTKSLVEWAKLLHPTPALGGEP REKALALLQKYEAHERGMYAAPFGFMKDMGDGIVIVAIRSALIMDKVLYAYAGCGVVADS DADEEYAETNNKMRTILDAL >gi|292596534|gb|ADCV01000014.1| GENE 63 65657 - 67420 1339 587 aa, chain + ## HITS:1 COG:L0169 KEGG:ns NR:ns ## COG: L0169 COG1165 # Protein_GI_number: 15672713 # Func_class: H Coenzyme transport and metabolism # Function: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase # Organism: Lactococcus lactis # 2 577 3 556 560 531 48.0 1e-150 MNEYIAALVDEFYQLGVRHAVFSPGSRSTTMAMLFTEYEGFETYMNIDERSASFMALGIA KAHKEPTVLVCTSGSAVAHYLPAILEAQYSGVPLIVLSADRPYTLLHTGAPQTVDQQKIF GTAVNYYEELAVPQKEHYYTYPRQVARKAYMKAMDIKKGPVHINVPLFEPLVPELDRKHF EAGRSPYKVFKPNYGEVFSYQNRSLLLAQYKRVLILAGPQIDVDEVEFIHSFAENLQAPI LADPLSNVRRCHKTGAIVANHEVASNRNNDTDMIQKKHFSDVVISTYDAFLADKDLWPVL KPDCVIQFGQIVVSKRVQQMVASWDNVEYIEINPTMDSMNPTGKTTMHMQASIDMFTHLF AVKNESNAYLNRWKRLEVAGKAQLSTAIEEPSCFEGRTIRELQQHIPDNSQVLVANSMTV RDFDYFWFSGESDAVLYGNRGVNGIDGTVSTALGLATNHQPTYLVTGDLSLFHDLNGLAV AKTHNLNLTIILHNNDGGGIFEYLPQKGTKYFDYLFSTSQGLDYSGAAKLYGCGYTKISS PDELVPVLAKVSEESGVHIIEIPTDREYSRQLHRKYTKVSVDMEALL >gi|292596534|gb|ADCV01000014.1| GENE 64 67417 - 68277 933 286 aa, chain + ## HITS:1 COG:L0170 KEGG:ns NR:ns ## COG: L0170 COG0596 # Protein_GI_number: 15672712 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Lactococcus lactis # 27 282 13 270 271 219 42.0 5e-57 MSQYFCSIVDNALCNPAQRMYFDLGEYRYGLTVVGEGEPIVCFHGFSESSYTWDSINLPG YRVVRIDLIGHGDSDIPDENQAYTIPQMIKDLHTVIYYMVGESYYLMGYSMGARIALSYA LEYEREIKGLILESGSVGIASDAERAARRKADEDLAAHIEEHDGAWFAARWAEVPIFESQ KQLSEGVEELIYLRRSNNSPYALACTLRGSGQGVMPYVGDKLKKFSVKGLYVSGALDTKY TTIGRDVFGKLPSFNHVIVNGAGHNVHIEKPQIFEQAVLDFLQKKG >gi|292596534|gb|ADCV01000014.1| GENE 65 68282 - 69124 1158 280 aa, chain + ## HITS:1 COG:L0171 KEGG:ns NR:ns ## COG: L0171 COG0447 # Protein_GI_number: 15672711 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroxynaphthoic acid synthase # Organism: Lactococcus lactis # 1 280 1 280 280 511 84.0 1e-145 MSKFDWKVLDRNYEDVIYETYNGIAKITINRPEVRNAFRPKTVMELIDAFTVAREDNEVG VIVLTGANHGKGEDKEAFCSGGDQSVRGHGGYVGEDNVPRLNVLDLQRLIRVIPKPVIAM VNGYAIGGGHVLHIVCDLTIASENAKFGQTGPRVGSFDAGYGAGYLARMIGHKRAREVWF LCRQYTAAQAYEMGMVNTVVPFDKLEEETVQWCSEILELSPMALRMLKGAFNADTDGLAG LQQFAGDATLMYYTIDEAKEGRDAFKEKRKPNFKQFPKFP >gi|292596534|gb|ADCV01000014.1| GENE 66 69328 - 70737 1115 469 aa, chain + ## HITS:1 COG:L0172 KEGG:ns NR:ns ## COG: L0172 COG0318 # Protein_GI_number: 15672710 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Lactococcus lactis # 32 466 1 419 420 444 52.0 1e-124 MEWLRYGAQHYPNRKCINEYTYNDIYRGVLHVARNLVPLDASRVAILSDNSVTMAMYVLA AMLVHKEVLLLNVHLKLKEIENQLDQLGVTTVLHSKERRNQLSHFVDSEASNSIVTIEFE TLESILSDLAVEDFFDWTFADADIAVIMNTSATTGQFKSVPLRWGQIKAHVQASQEVLGK TEQDNWLMVLPLFHVSGLSILMRSLYNGTAVTILPKYDEAQVLKLIESEQINMMSLVPTI LTQLEPHITHHVLRVILLGGEFIPLALIDACEKKSLPIYKTYGMTETFSQSVTFSVLEYP HKRESVGKPLPGMQVRIDNPDADGVGEIHLTGPMVMTGYINKEPIDGDFNTDDIGYIDED GFVYILNRRKDLIISGGENIYPKELEDLVYTLPSVKECVVVPVPDAKWGQVPALFVAFHD GKSLPPEDILAFMTNSLAKYKIPKYVKVLTALPRNGTGKILRNKLKFEN >gi|292596534|gb|ADCV01000014.1| GENE 67 70745 - 71896 819 383 aa, chain + ## HITS:1 COG:L131805 KEGG:ns NR:ns ## COG: L131805 COG4948 # Protein_GI_number: 15672709 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Lactococcus lactis # 8 380 4 363 367 295 40.0 9e-80 MNDILNFKSITTYRLKLPLKFNFKTAKGEVKERETIVVRIEDQQGYVGYGECVAFTEPFY TFETVETCWKTLVDDYIFNLRLMRPKPLMTYVRQLQFWLNRDNMPMAIAALENALIHLHC ERIGVNSVSYIMDQPLQETIESGVVVGDVPIDQLLDVVAHHVVNGCKRIKLKVNPVDGYE RVALVRKQYPDLVLAADANRSYSYQEIDKVRQYDDLGLACIEEPFAMANLQSYKDWKWER LNHGDWKIYTPICLDESILGYDDLSYAIEYGLIDVLNIKVGRMGGLIPTKAAINLCRERH IPYWIGSMVESGVSKMLHVQLAALGDSYMAGDLSDSSRYFEQDLIFPDLTFKNGVMQVPD GDGLGVTVFDDRLETYCMEKRTL >gi|292596534|gb|ADCV01000014.1| GENE 68 71893 - 72270 367 125 aa, chain + ## HITS:1 COG:L131392 KEGG:ns NR:ns ## COG: L131392 COG2050 # Protein_GI_number: 15672708 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Lactococcus lactis # 1 121 1 131 138 111 45.0 4e-25 MNLIESLQIDVPRMTSDTTCIAKMNLNEFHEQPQGYLNGGATLAFAEIIAGMMSNELVGS HKFGVGQSITANHLRPVTCEGTLTALGTLLVKGKTSHVWRFDMIDDAQRLISQVTVTLAI VDFDR >gi|292596534|gb|ADCV01000014.1| GENE 69 72507 - 73127 509 206 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0380 NR:ns ## KEGG: Vpar_0380 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 206 1 206 206 362 98.0 4e-99 MNKFNSKGVIIALIIAIVGAMAAAWYFLWYVPHTPAYTLKIIHQAVQDKDADEALRHIDI KSIVKNIVEREGNKYVDTSTPLGKATIAATKTFGPALIEDVIRTYIEDPDSFKSESPTNN TTTANDDNKSMVDRLVEGRLFKEHDVEVKNLKSEDNGDKATVTVTIQNNKKNMTKDIKVL MRHLGDGTWVIYDIPDIEDLYTITRK >gi|292596534|gb|ADCV01000014.1| GENE 70 73826 - 74899 336 357 aa, chain - ## HITS:1 COG:L48477 KEGG:ns NR:ns ## COG: L48477 COG0582 # Protein_GI_number: 15672029 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 20 356 32 391 394 122 27.0 8e-28 MAKKRSDGRYQVSKMINGKRKYFYGSTKKAAAEAMEKYVNANQSCANFDDTISLNTWINI WLQLKEKSITPATYQSYTGIINRYIRDKIGGVKLAEIKPNTLRYVFESMDGLSSRTISYT MTILSSILEQAVKDDIIPKNYMKNIDRPKHVKVRHMVTLSADEVKNFLSNISNSEHHALF KLAFATGMRRSELLGLRWSDIDFKKSTISISQTALKIGSTAVISNTTKTTSSKRIIAIDT DTIQELMKHKTTIDKRRIKTMNWINNNLVFPGIKGAPRCPDEVSKLCKKYANLIGKPTFT MHGTRHTHATLLIENGANMKAIQERLGHASFQETMDTYSHVTPKMEDDIVERISKIF >gi|292596534|gb|ADCV01000014.1| GENE 71 75066 - 76097 172 343 aa, chain - ## HITS:1 COG:no KEGG:Smon_1019 NR:ns ## KEGG: Smon_1019 # Name: not_defined # Def: Abi family protein # Organism: S.moniliformis # Pathway: not_defined # 2 305 4 298 332 108 30.0 3e-22 MIIYDKPFKTYEQQIELLRTRNLNISNQEFAIHALDTISYYDLINRYQKHFIPDGEHFIE GTTIEQLYSLSMFDRSIQAFILKYSMFIENIFKTKLAYTLSRDFGVDMSVYLAKSKYKES YQNPNNVLTFDAVQLECFKTRNDDKIANNPTLYYREHHNHIPPWILLKNLSFSNSINLFK LLKNAQRDDVVNELLPNEPDRIIPLNDKTNFIICALEAIRVFRNAAAHNLDFTALRTDET RKIPSSTLSKCLPGKILIKKKKKKIEKNEKVYLKGVYGVMLSMMVLLKTDYLKKQFIVDF LSVFNGIDEGDREIRPFLFQCYANIADMPADTQNRFLIYLGQT >gi|292596534|gb|ADCV01000014.1| GENE 72 76233 - 76616 297 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794985|ref|ZP_06760120.1| ## NR: gi|294794985|ref|ZP_06760120.1| hypothetical protein HMPREF0873_01602 [Veillonella sp. 3_1_44] # 1 127 8 134 134 232 100.0 6e-60 MFDAYKIIAIENETTVLINYGLNDGAKEGDVLRIIEPGEDLIIDGVNYGAYDGIKAVIEI TAPYAQFSVCQRIVRRTSTLFSPVSVLQKTIARTVPLNVNKDDISDNLSAPTITPIKIGD TVLLTRE >gi|292596534|gb|ADCV01000014.1| GENE 73 76634 - 76936 125 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794986|ref|ZP_06760121.1| ## NR: gi|294794986|ref|ZP_06760121.1| putative toxin-antitoxin system, toxin component [Veillonella sp. 3_1_44] # 1 100 1 100 100 180 100.0 2e-44 MYRDIKYPYEGADSVNINLIYVKLRKTQTAILKLNEDGTYTILVNSNKPRDMQRKGILHE LGHIIHDDMYSIANVDLIERMANAREVDDVDGINFYHHVL >gi|292596534|gb|ADCV01000014.1| GENE 74 76926 - 77147 198 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294794987|ref|ZP_06760122.1| ## NR: gi|294794987|ref|ZP_06760122.1| hypothetical protein HMPREF0873_01604 [Veillonella sp. 3_1_44] # 1 73 1 73 73 109 100.0 6e-23 MANYENIINSCVREMQAMSFIVSSISILLALLIYYFTQNGYISLMLPITVNGIFLMIFTN QVQKNMRKKFHVS >gi|292596534|gb|ADCV01000014.1| GENE 75 77149 - 77523 470 124 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0382 NR:ns ## KEGG: Vpar_0382 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 7 119 7 119 123 81 39.0 1e-14 MNKTIYDRIRERRIQLGLSQEDLAIKMGYKSRSTINKIESGAVDIARNKIEKFAEVLNTT PAYLMDWNDTPKEYYIDPEVSKYAQAVKDNPNLRILFDASKDMSKDDIDFVVNMIEGLKK REGK >gi|292596534|gb|ADCV01000014.1| GENE 76 77670 - 77879 245 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794989|ref|ZP_06760124.1| ## NR: gi|294794989|ref|ZP_06760124.1| putative toxin-antitoxin system, antitoxin component, Xre family [Veillonella sp. 3_1_44] # 1 69 3 71 71 128 100.0 9e-29 MLGFNGKMLSRKIYDTGIKKKVLAERLGISPYGLAMKISGKNEFKNSEIITICESLNLTP DERDSIFFS >gi|292596534|gb|ADCV01000014.1| GENE 77 78123 - 78917 49 264 aa, chain - ## HITS:1 COG:no KEGG:LSEI_0496 NR:ns ## KEGG: LSEI_0496 # Name: not_defined # Def: hypothetical protein # Organism: L.casei # Pathway: not_defined # 1 256 5 271 277 162 31.0 1e-38 MNSLQITKICKILGELLTGQEITIMFANLGINCELPDIDTKWKRIYNGVANECNKNNSYD PMIKIIEYIMSPSLFVERQNDFTDALDSLNTLLSFIGLKLLPTGKVIKVTPATTLDEATE VVSRLKADLHRFSIHPQILAFCRPEIISENLFHLIFESCKCLLAELRSISGLDLDGSTLV NRCFEGSNPIIVMNRFQTDDEKSDHNGLRSLLNAIVYLYRNPKAHTPKYLSNDTYQSTIE ALIIISRARYALEKCVRNYTHKIN >gi|292596534|gb|ADCV01000014.1| GENE 78 79098 - 79373 230 91 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794991|ref|ZP_06760126.1| ## NR: gi|294794991|ref|ZP_06760126.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 91 1 91 91 129 100.0 5e-29 MKEEKHIKILRQQLELLTELQKQVDDPQIIMELSDKIIVLSDALTNLEESQNNKLSVWKD ASLIYQLALSIQNKCAKDIDELFALGSDKSK >gi|292596534|gb|ADCV01000014.1| GENE 79 79341 - 79934 296 197 aa, chain - ## HITS:1 COG:no KEGG:Sterm_0826 NR:ns ## KEGG: Sterm_0826 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 4 184 8 188 197 101 35.0 1e-20 MKFKMPVAPFKNMSELFTVIRNNKVIADKVYGFFCSSKYPNSIQTLEFSDIIEGDILVHN KKNYHVIDVKPLGMTDGAILKYETDYQRAHKRSNATNIFNIGTINGNSIIGSQENVSISI DQSINSISNLIDNDKNISMEEKEAFRKMLHLLETNLSNDIPVPKGLLSKFSNVLHKHQHI AIAVMQMLFTFVTAQSK >gi|292596534|gb|ADCV01000014.1| GENE 80 80044 - 80244 103 66 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794993|ref|ZP_06760128.1| ## NR: gi|294794993|ref|ZP_06760128.1| putative DNA binding domain, excisionase family [Veillonella sp. 3_1_44] # 1 66 1 66 66 133 100.0 5e-30 MDRNKLCITVAEAAELASVPQDVIRQWAADFDFPSMKIGARGGKRLIHLDSFNAWLGKRC QARIGE >gi|292596534|gb|ADCV01000014.1| GENE 81 80249 - 80425 139 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794994|ref|ZP_06760129.1| ## NR: gi|294794994|ref|ZP_06760129.1| hypothetical protein HMPREF0873_01611 [Veillonella sp. 3_1_44] # 1 58 1 58 58 102 100.0 9e-21 MKKLAGIMLATCFGILEGSDVQGYELHSSTMLLLLLCVVSAVAILYKSFKEDEHYGRY >gi|292596534|gb|ADCV01000014.1| GENE 82 80412 - 80510 159 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDDIDVIGVLFILVVMAVCIMFYGGLVWVLIR >gi|292596534|gb|ADCV01000014.1| GENE 83 80507 - 80701 132 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRPVRTCTKCGVRLIPHTHNYIYDETNRKAIRVCKHCHDEHVRRKSKNARTHGNEIRAQ IKLT >gi|292596534|gb|ADCV01000014.1| GENE 84 80730 - 81101 353 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794995|ref|ZP_06760130.1| ## NR: gi|294794995|ref|ZP_06760130.1| hypothetical protein HMPREF0873_01612 [Veillonella sp. 3_1_44] # 1 123 1 123 123 253 100.0 4e-66 MPTVNKNIDFDFFNRTGRYPPKIRFNMWGSACGLSIDAYKALGQPIGLRVGIDKADREIH VLPVTKENIKGAIYPKTHELKHSKVLISTSRIVLAELRELGITKNIEGAVNDENGTLELL FKF >gi|292596534|gb|ADCV01000014.1| GENE 85 81113 - 81502 262 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794996|ref|ZP_06760131.1| ## NR: gi|294794996|ref|ZP_06760131.1| surface antigen (D15) [Veillonella sp. 3_1_44] # 1 129 1 129 129 238 100.0 6e-62 MPEIKAIKSKPAANAFDFNFFADNRGKHESLQKVAIVSTNSYIKLSMPAYRKLKGPEYFK VGIDINNKVICVAPALATEPYVIKPTAVQIERNTIYISKSHSVIRKLQEIGIPKIVEGKL VDDELLFKF >gi|292596534|gb|ADCV01000014.1| GENE 86 81477 - 82118 768 213 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794997|ref|ZP_06760132.1| ## NR: gi|294794997|ref|ZP_06760132.1| putative choline binding protein A [Veillonella sp. 3_1_44] # 1 213 1 213 213 363 100.0 3e-99 MMNYCLNSKGETIMENQNILTIKFNTLDDLAVQVADWNERLNHQCCGNCHDGKAPAGTVC ETIDVEAVTSKVEPKVVKVEKAEVKEEKAPNKVAKSEQTQDFHVTDFEGNPIKLKKEDKV KPVADTEPAKATKTEEAAPVETPQQDTELDVVTEPVDKKAFYKEFRAWMGEDGVKAKKAI AVFSKHGVTRPSSDSLTDDLITDLKSIMAEKEA >gi|292596534|gb|ADCV01000014.1| GENE 87 82121 - 82489 525 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294794998|ref|ZP_06760133.1| ## NR: gi|294794998|ref|ZP_06760133.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 122 1 122 122 168 100.0 1e-40 MAKQQFKAQADICKKSLDVLLKAIEVDPGNAEEYQAGIAYTEGVMKASNAIVKAFDVVEP PKAAASKEKAEDVAKEEKPKRTRKTKTSKDSAPVNEPATDETPPMVETSAEENADLFAMF GD >gi|292596534|gb|ADCV01000014.1| GENE 88 82504 - 84159 1123 551 aa, chain + ## HITS:1 COG:no KEGG:Dred_1195 NR:ns ## KEGG: Dred_1195 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 226 546 7 316 328 81 22.0 7e-14 MEIVSSTYIHKMFDSVILEAPYGAEYTTICHLDCGFTFGGSWQRKYSYHNGYVTGAKYYT CPNCHLSSNPYDHKICYSINDEKVYPVTAYVEVINYKYFLDLKIRYQGIQLFFDGRKNDH GMCTETLRFDFKKRKATYIDRFRVRHELTVDYIRENEIMPVLKFFGDSYAMTDFNRKFLN KTFKALRVMFEKRLKETYSYGAKDIYVSPSATEENGYHFTMLLNMILKLSAPDMPSIVSL MRQYGYWTNAYSMYRYTNIPFEEDVLTATRKGMNFQAALRQSYKSPNSRALRKCMVDDPL SVIMSDVLNLFGDENCRRTILTLQRSYESACPYTGKLHNANDFRKAMKLNTPHSRDMWQK LIERFDEPAILRWLLGEDIRDIADCVDMYVKLGPKYQDVLWEKRFKLKQFHDELINLFNK QEYGDVILPAQPQLQADVNGMHFMVPKTAADLMTVGKQLKNCVGSYRGRVMQGQTAIVVV TDDDMNPVACLELTTGEKVKKGQPKFNHLVQAKLFANTQLKQNNKIHSTVMQWANQLQIE PHTIDVDATVV >gi|292596534|gb|ADCV01000014.1| GENE 89 84169 - 86076 1543 635 aa, chain + ## HITS:1 COG:no KEGG:lin1241 NR:ns ## KEGG: lin1241 # Name: not_defined # Def: hypothetical protein # Organism: L.innocua # Pathway: not_defined # 1 633 4 645 646 328 34.0 3e-88 MKLTKLELLNFKGLKSFAINLNGDVVIRGDNATGKTTVFDSVCWLLFGKDSLDRADFEIK TLEAGEPVHKVNHEVTGTFTLDEGGTVELKRVYREKYSSPRGGEVTLTGHTTDYFVDGVP KKEKEYKEMVSSLVDESIFKLITNPLYFNETYSWQNRRKLLLEMCGDIDDAAVINSREDL KRLAELLDGRTVDDQRKVIASKKTAINKELDMIPVRIDEAVRNKPEVMADKDKLISDIKT LSTGIDDVEKQKAIIKNGFSATEKQSKIRDINRQLDVRRSDILSDYHKRKQHLRSEYETS LSKLKATEAERDRCMDRSNELNKEIEREAKRIETLTSEFDTFNSQQFSKESCPTCGQQLP ADKQEKLEAEFNANKSKKLEEWKGLIDSAAKLKENYEEQQKTMISKADGLIDDITLQSKE RDIKHEEYEACSEPNVEDDPTYTDLKAQLFLLEIEEEPGADTEELARLEDELSSLKSKKA NLETELNKFKLIDDIENRVIELENQQQKLVAEKNKLDEASYLMDEFVKAKVNMLEESINT RFKLARFKMFNVMLNGNVEECCETTYKGVPYRSMNNAARINVGLDIINALTSYFKVNAPV FIDNAEAVTDFIPVNSQTIKLIVDESEPQLVVKEV >gi|292596534|gb|ADCV01000014.1| GENE 90 86079 - 86849 696 256 aa, chain + ## HITS:1 COG:lin1738_2 KEGG:ns NR:ns ## COG: lin1738_2 COG3645 # Protein_GI_number: 16800806 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Listeria innocua # 112 253 8 149 152 134 50.0 1e-31 MTDLQIFNNDTFGQVRILEKDNELWFVAKDVADTLGYQNGSRDVNRHTDEEDRTKTMVFD GNQNKETILINESGLYSLVLSSKLPTAKQFKRWITSEVIPQIRKTGAYSMNIPKSLPEAL RAYANEVESHNATKAIVAQQEQQIAEFKPVKDYVDKILSSKSCLTITQIAADYGMSAQEL NKILHEAGLQRKVGDQWILYKQHMSKGFTKSETFTFCRSDGRLDSKITTKWTQKGRLEIH NILSNLDIHAVCENVA >gi|292596534|gb|ADCV01000014.1| GENE 91 86860 - 87732 874 290 aa, chain + ## HITS:1 COG:BH3543 KEGG:ns NR:ns ## COG: BH3543 COG3723 # Protein_GI_number: 15616105 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Bacillus halodurans # 13 260 29 264 292 222 47.0 6e-58 MGEVTKAQTQTPSLKTMVSSESVKKRFNEILGKKSAAFVSSLISVSNNNELLSKADPTTV ITAGVMAATLDLPINQNLGFAYIVPFYNSKKKINEAQFQMGYKGYIQLAMRTGQYKTINA SEIYEGEIKHHNKLTGEFELGERTGDNVVGYIAYFKLINGFEKYLYMSKEDAEAHAIKYS QTYKRGFGLWKTDFDAMAIKTVLKRLLSKYGILSVEMQSMANAISVDGAVLRDNNGELTP DFEGETIDVQSDVAETIANNANSEAIDIEPSPVSEFVNPETGEAVNMFGD >gi|292596534|gb|ADCV01000014.1| GENE 92 87735 - 88457 210 240 aa, chain + ## HITS:1 COG:lin1243 KEGG:ns NR:ns ## COG: lin1243 COG1235 # Protein_GI_number: 16800312 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Listeria innocua # 2 233 22 252 252 167 39.0 1e-41 MISIQVFGSSSKGNCYRIKTSTNGDELLLDAGLSFKEIQRYCRFNFLHLCGTLLTHQHGD HSKAVNDLLKLGHRVYMLKDTADALYVAGHHKAIYITPKIQFTIGNFSILPFELEHDVPN IGFLISDGEEKLLYITDTYYCRYTFKDVNHIMVECNHSYEILNQHVEAGYLDEKRMERLI QSHFSLENVIKFLKSMDLTKCQDIRLLHLSDNNSDAETFKRAVQAATGKLVIVEQERSPL >gi|292596534|gb|ADCV01000014.1| GENE 93 88454 - 88894 411 146 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795004|ref|ZP_06760139.1| ## NR: gi|294795004|ref|ZP_06760139.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 146 1 146 146 266 100.0 2e-70 MIIKSIQIKDNDISIAYQKPSATGLTDVFTLKSKDDPRPELLQAFSKLQSIVKKNFEFLE EFKIPFLVNTFKFKYGDIEGLINQVGVEGIVSDMNTPNEFKFKTDWLNVEYADSTFAISV QDLIDECIKFIMGRRAQDNLFNDSEE >gi|292596534|gb|ADCV01000014.1| GENE 94 88900 - 89838 394 312 aa, chain + ## HITS:1 COG:no KEGG:Abu_1710 NR:ns ## KEGG: Abu_1710 # Name: not_defined # Def: hypothetical protein # Organism: A.butzleri # Pathway: not_defined # 1 155 32 152 248 66 30.0 1e-09 MAKNQSYYFSHDINASNDPKIAAMISELGMISYAWWWILIEKLAAADDYKLPLKKYTFVA LDNELRMNNEQILTSVQQVFNKNQHVLEQNSMCSFCSFLLIYLLIHDYELLDCDDEYFWS PSLIRRFEFKKVKEETIREKRRLAGLKSAESRKAKKQNLTHVQQNLTHVQQNQLIKEKKR KENNIERDTRAREDENPLSMFDDDGVKNKPIYELYMKSIGVVSPTIKERLDDLVESYGKD RVIVAINTTADNGGNSIKYVETVTAGNLKQEVQKDFGASKCNSNARGVSRKNSRKDEDVD WEKEYQRVHGKK >gi|292596534|gb|ADCV01000014.1| GENE 95 89933 - 90460 182 175 aa, chain + ## HITS:1 COG:aq_910 KEGG:ns NR:ns ## COG: aq_910 COG1484 # Protein_GI_number: 15606240 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Aquifex aeolicus # 33 144 75 184 235 61 37.0 8e-10 MDFDWLRKHGSFPKENAEAYDVVKKYSDNLKTNLDSGKGLILRGPAGTGKTSIAVSILKQ AMALGKGCLMISMPNLLDTMLTLSKGDNVAYLRFEQKLRNIPLLLLDDFGAEYSKSDWVP SKVESIIIDRYNRMKPIILTTNYSDAWTEKNYSQRVYDRLRGEYAVAIFNGASHR >gi|292596534|gb|ADCV01000014.1| GENE 96 90457 - 90855 183 132 aa, chain + ## HITS:1 COG:no KEGG:lp_2433 NR:ns ## KEGG: lp_2433 # Name: not_defined # Def: prophage Lp2 protein 24 # Organism: L.plantarum # Pathway: not_defined # 19 118 10 112 126 72 41.0 4e-12 MKILLRCQFRFRKKSHDRFPTLNEYIDCERGSTIAAAAMKKKCTEQVKEQCISQQIQPVN GKVDLLFEWHSSTRHDPDNVAFAKKFILDGLQLAGVLENDNRKFIGTMADEIIQDNEDYV ILHITKNMGIFL >gi|292596534|gb|ADCV01000014.1| GENE 97 90874 - 91422 194 182 aa, chain + ## HITS:1 COG:no KEGG:SPJ_1864 NR:ns ## KEGG: SPJ_1864 # Name: not_defined # Def: GP37 # Organism: S.pneumoniae_JJA # Pathway: not_defined # 130 180 27 83 83 68 57.0 1e-10 MDHFMVMLVLGIIVLVVCYTIIQILGTIKKYTDKQSYQTIQGLTPGRLYEIPNNPPPPPV RLSASEELKQYTANETLKRHAANLKRLQGEHKMRYNSTLQEKAIEAAQKALYGVDDFDYL AADGDLNGMFVVWFCKTLQNWKAIVAGLDFDEFIEVTHNGDKNETYVDIYRKEMNVCIKD NQ >gi|292596534|gb|ADCV01000014.1| GENE 98 91451 - 91825 356 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795009|ref|ZP_06760144.1| ## NR: gi|294795009|ref|ZP_06760144.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 124 3 126 126 227 100.0 2e-58 MLVKNENEWCWCIGENVGYPQKSIEDAVNEFAKTYPADEVPKIRVANPYYYIPTVDAERV IEEIVYGDLDDEIAEWSEDYLLEVKQEHIDELQKELTTVFRKWEERNGYKNTSFVIFKTI NPFE >gi|292596534|gb|ADCV01000014.1| GENE 99 91837 - 92076 131 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795010|ref|ZP_06760145.1| ## NR: gi|294795010|ref|ZP_06760145.1| hypothetical protein HMPREF0873_01627 [Veillonella sp. 3_1_44] # 1 79 1 79 79 139 100.0 4e-32 MYTVVLIECNGSDNIWCYGSYKTINEAQKAKNEFEEEQIKFMQNLTSEQFSKFIEEMPVI VKNYSRIMSVSYILQNCCG >gi|292596534|gb|ADCV01000014.1| GENE 100 92097 - 92186 56 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILIISYEAGKNKFGLKHKINDKGGNIFE >gi|292596534|gb|ADCV01000014.1| GENE 101 92179 - 92709 482 176 aa, chain + ## HITS:1 COG:no KEGG:CLH_0887 NR:ns ## KEGG: CLH_0887 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 171 3 166 169 63 31.0 4e-09 MNEYDIEKITKLATEVATKTYYELAKQENAQLGRKLRHNTIKLLKHYSQLQSYVDNAISD STQAEDIWLNELLADMFDDNSIVRVNAIVKSKEKTALMMRHVNNMLDIYAEKCSEKQFKY CECVRRYYIDGETLEEIAESFPEKPDVRTIHRYVARGIEELSVLLWGVIGLNTKLS >gi|292596534|gb|ADCV01000014.1| GENE 102 92920 - 93051 244 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKISQSGSKRGTKKFVAYVTDPKTGKRRYARDYGKRAFVIYV >gi|292596534|gb|ADCV01000014.1| GENE 103 93889 - 94419 359 176 aa, chain + ## HITS:1 COG:no KEGG:CLH_1731 NR:ns ## KEGG: CLH_1731 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 2 170 6 177 197 74 31.0 2e-12 MKITDDLKTATASQSNLAKALGLSRQRVSQLLQEGVLATDEKNQILVIKSVINYVKYKGQ SSAEEVSSSDDAIFEVEKAKNERAKRKIAELKLAKMNGEVYSADTVEQVMTEMLVNLRTQ LLGLPTKLAPQLQNVTKEEAYNLLTQEIEDKLSELSEYTPSLFMDSNELDEDKAPN >gi|292596534|gb|ADCV01000014.1| GENE 104 94453 - 96357 1307 634 aa, chain + ## HITS:1 COG:RSc0853 KEGG:ns NR:ns ## COG: RSc0853 COG5525 # Protein_GI_number: 17545572 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Ralstonia solanacearum # 13 584 17 585 660 260 32.0 6e-69 MKTAKELWQYVSKMGLKPLPKTSVSQWADDYRMLSQGLSAEPGRWKTSRAPYQKDIMDAF TQPGINRVVVKSASQVGKSDIMNNVLGRYAHLDPCAVMMIQPTIELAQDYSKSRISPMIR DTKVLSQVFYETKSEDGTKTRDGKNTILSKLFPGGRLIMCGANSPAGLASRPVRVLLADE VDRFPDSAGTEGDPVDLAAKRMTTFWNRVMGLFSTPTNEGSSRIDVEYQTGTQEEWQHEC PNCGEYHLIRHTEMECETEEHKDAKGRKIVIVSDVKWRCPDCGSTFSEDEMRKVSQKYIS KNPAALHNGIRSFFVNGFTSPWLTWNDIMREWLEAKGDPTREKVVMNTRFGESYAQQGAF EDYQQFIRRREKYGADLPDGVLLLTCAVDTQDNRLEYEITGWGYGEECWGICKGVILGEP DNNATWDALDAVLDKIYHFKNGTGLKVARAFIDSGGHYTSKVYEYCEKNFSKQRFAIKGT AGTPGIPLNYKIGKASGSKIPLVMLGVDDGKQQVMNRLAIEEPGAKYFHFPLDEELLGTR GYDELYFKGIISEHKQKVKRKGVIHEIWEPTAGVRNEPLDLRVYNLACMNSIHPDWDRLA EVVKGGGHSTTTVTTPKKKQMRKRIRRASKAADI >gi|292596534|gb|ADCV01000014.1| GENE 105 96366 - 96611 94 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795015|ref|ZP_06760150.1| ## NR: gi|294795015|ref|ZP_06760150.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 81 1 81 81 147 100.0 3e-34 MATSYSNKPRLIDVRLEWYVKAEEAILTGQSYTIGNRTLTRANLAEVRKMIDDLVARGAK LPGMDTDNGRGNRSKRVVFRD >gi|292596534|gb|ADCV01000014.1| GENE 106 96621 - 98228 1029 535 aa, chain + ## HITS:1 COG:ECs1632 KEGG:ns NR:ns ## COG: ECs1632 COG5511 # Protein_GI_number: 15830886 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Escherichia coli O157:H7 # 34 535 35 526 533 146 26.0 9e-35 MARKNKKFSAKISTPRAKNSGYSEGGASHNNKSLKGYNPKKLGYKADIGANLSTLRDRSA DLAINTPVGTAAINTSTTHTVGAGLNVFPKPKFQILGISAEDARAWARKVRAEFDLWAES KDCDIYRKNNLYDMQSISYQGYLTDGDSFAVFRRKPSTPDMPYTLRLQLIEGNRVSNPLT SSTYVTGDPTGVEALNPDNGNRILNGVEIDTDGAIVAYWVSNQVPGEPITSLLTAWARVE AYGKRTSIPNVLQISNDTRPEQYRGVPYLAPVIETLKQVYRYTNAELTSAIIKSYFALFF TEAVTNSGSLNDILADNGVDDPTEPVVDVSEYNLGPGTLNALPKGVDVKSVDASNAQSTF EVFSTQLIKQVGAALNQPYEVLMKNFNSSYSASRAAMLQAWEEYKLRRKWFARDFCQPIY EVWLMEAVANGRIEAPGFFDDPLIRKAWCNADWFGPTMSILDPVKDMNGSTLRVENGVST REREAAEMTGTDLEENIAQLAFEKQLMEKYGMGLADAVNPSVGSKSTTKGGEEDE >gi|292596534|gb|ADCV01000014.1| GENE 107 98221 - 99303 1234 360 aa, chain + ## HITS:1 COG:CAC1893 KEGG:ns NR:ns ## COG: CAC1893 COG0740 # Protein_GI_number: 15895167 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Clostridium acetobutylicum # 4 196 14 209 256 115 38.0 1e-25 MNKFWSVKNFVNQDGTGQSELILYGDISDTSWWGDEITPREFASDLASCNGNDLTMRINS GGGDVFAAQAIHNMIKAYAGKVTAHIDGLCASAATIIACAADKVIMPRNALYMIHNPSVY LGDSFDADGLTKMANYLASVKQTIANVYLSRSDVLTSEQVKTLMDDETWLTADEAKSYGL IDEVDTAIMDNAIMNNGMVIVNKVSCKYSAKNEAKIKQFLTSKEKPMTENQFMASLKGLL GISTNEPAENAAVTAERERVEALNALKGDNEVINRLVDVAVKEGKTVDEVTPFISAVSDI PSTDNKVVDQIRQLVIDQMESGADQVAPQGASTPETNDAVAKASAIDEVVAFANAKKGGK >gi|292596534|gb|ADCV01000014.1| GENE 108 99303 - 99644 480 113 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795018|ref|ZP_06760153.1| ## NR: gi|294795018|ref|ZP_06760153.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 113 1 113 113 208 100.0 8e-53 MAYFEQVNGVAADYLLGGGGVPVLTQNVKVAVGDYKRGQVLENNAGTFQKITTTGKPAGI VVSDTTATTDHNVLTVYISGRFNREVLVVDQSYKINDHEADFKDAHLFLTSIK >gi|292596534|gb|ADCV01000014.1| GENE 109 99658 - 100707 1296 349 aa, chain + ## HITS:1 COG:no KEGG:Dred_1207 NR:ns ## KEGG: Dred_1207 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 23 345 6 326 330 167 31.0 6e-40 MAIDFKDTFSLMQAVERMKAPASFLLDTFFPQIPAVATSKKIAVETRKRGRTLAPFVSRG ASGVNVKRAGSKIALYEAPMMGPRTVIDPEQLDQRAFAENIVSTMTPAQRSAQMQAEDLS YLQGTIINRKNKMAADLLTTGKCKIEGYADDGETVQVDEIDFEFEQDITPTTTWDQAGAD IYGDLKMASEKIQENAGIVPTVLVVGKNVEKYILDNASINKMLAIPNRENMTMFSFAPEY LSPQVRYVGRIMSLNIDVYAYLETYQDDEGKVKSFIGDDAAVLGVPGRGRQQHAAVTLLN DDNQFTTYAGIYVPYYYANKATQELTLSVYSRCVLIPETIDDWAIIKTK >gi|292596534|gb|ADCV01000014.1| GENE 110 100722 - 100958 374 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795020|ref|ZP_06760155.1| ## NR: gi|294795020|ref|ZP_06760155.1| hypothetical protein HMPREF0873_01637 [Veillonella sp. 3_1_44] # 1 78 1 78 78 89 100.0 4e-17 MKIRVLKGYLAHEGEMYGKGEVVDIKKKAIAMSLLESEKFESAEDDPVEVPEPLEVIPDE PEEEMELPEVDAEVTVKK >gi|292596534|gb|ADCV01000014.1| GENE 111 100958 - 101311 314 117 aa, chain + ## HITS:1 COG:no KEGG:Dred_1208 NR:ns ## KEGG: Dred_1208 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 1 106 1 99 102 65 35.0 6e-10 MRFRDYLESDIDDVFLNEDEFAEGHNLNGTVAKAVIQSPTARESFLSNGSHVSNDGLHGV SVFVYCKLKDIPEIPSQGNVFRLDGDVYIVQSATEEDGLVSIELRAEARGGVDGWLS >gi|292596534|gb|ADCV01000014.1| GENE 112 101299 - 101832 630 177 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795022|ref|ZP_06760157.1| ## NR: gi|294795022|ref|ZP_06760157.1| hypothetical protein HMPREF0873_01639 [Veillonella sp. 3_1_44] # 1 177 1 177 177 317 100.0 2e-85 MVELELDKNAVATIEKALETLNEDRVRRVCQAASKRAATTARKAGTQALRNIYAIKGVSV VKSGVSINKLNDGTEMRIKGGYTSAQKYFKIKSLKRKGVFVSIKKGTETKVPNGFVSTSG IFMKRQGKDRYPLKGIYGPALPQMFGNETVMNAMQKEGMDMYEKRLYHELERALGGN >gi|292596534|gb|ADCV01000014.1| GENE 113 101832 - 102311 595 159 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795023|ref|ZP_06760158.1| ## NR: gi|294795023|ref|ZP_06760158.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 159 1 159 159 307 100.0 1e-82 MTPLDVSDGIAAYLMDELRNLNETSDVTASSIRVWSGFLPRVDKNEDKRKLCPAVVVHPY SVSDADSSTVGITVLVTTYDEALTEGHIGLYHLLEVVRERLLSDNPVALKYEIKDNIVNT TIPDDQPYPQWVGYLEFEVYIPVIRRNLNEIFAYNKAIE >gi|292596534|gb|ADCV01000014.1| GENE 114 102321 - 102548 160 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795024|ref|ZP_06760159.1| ## NR: gi|294795024|ref|ZP_06760159.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 75 1 75 75 144 100.0 2e-33 MNPVVYVGPSFRSSRLNQFMIFSDGAPLPEAEDPIFMHLFVPLDELNQAMLDVRTQGTQL NVFYVNALKNYKGVK >gi|292596534|gb|ADCV01000014.1| GENE 115 102549 - 103988 1549 479 aa, chain + ## HITS:1 COG:STM4213 KEGG:ns NR:ns ## COG: STM4213 COG3497 # Protein_GI_number: 16767463 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Salmonella typhimurium LT2 # 3 470 5 470 475 111 25.0 3e-24 MAFYHGVKTSEQATSVIAPVQTTAGLPIVFGTAPVHLTEDPNAVVNKPIICYSWEEAVQQ LGYSEDWAHFTLCEAMYAQFKLYGVAPIVFVNVLDPAKHKKSTTTTATLAEKKCVVKAAV LLNTLQVSSGGQTGVANTDYTAAFDDKNQLVISVIKGGKFDTATTLNLTYDELDVENFDY KNVIGGVDSNEKATGFELIDTIYHHFGIVPGLIAAPGFSQNPTVASVMKAKSRVINNLFG ATTLVDIDTTQVVKYTDAYEWKKGNSYTGESEVVCWPMVRNGDYMFHMSTHIMGIIGKCD ASNSDIPTLSPSNKSMNITGLCLANGKEVMLTHSQANLLNSQGIMTAVNINGWVSWGNYT GAYPGTTDVKDTFICVRRFNDWDDQTFILTYWQKVDMPILPRNIKTILDSETIRLNGLTS RGFILGGRIEFKEAENPTTDLLNGIIRFHKYRTPPIPAQEIESISEYDVSYFKTLFQTV >gi|292596534|gb|ADCV01000014.1| GENE 116 104005 - 104538 909 177 aa, chain + ## HITS:1 COG:no KEGG:Amico_1113 NR:ns ## KEGG: Amico_1113 # Name: not_defined # Def: major tail tube protein # Organism: A.colombiense # Pathway: not_defined # 5 177 3 174 174 139 45.0 4e-32 MASINQVPEVLNDFRVYEEGSDNCLGVAKVELPSESVMTQTVKGVGIAGEVEAPVIGHYS SMETKLTWNTPTETTHRLTGGRGVRLEVRGAIQCWDSGKDKYVIVPTRAVIRGRAKSKEN GTYESGNTIDATNTIETTYLKLEQDGKVVREIDKYAYKDSISDGTDFLGDVRAALGI >gi|292596534|gb|ADCV01000014.1| GENE 117 104561 - 104848 338 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795027|ref|ZP_06760162.1| ## NR: gi|294795027|ref|ZP_06760162.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 95 1 95 95 182 100.0 5e-45 MSKHNTMNETTGIELVKAGNSLQFEGISGYTLIKCEKSAKNEDRTITVPALSMTYQAHVA AAACGCKVDDIYSLPAADFTRVCLEVQNFLLNSEK >gi|292596534|gb|ADCV01000014.1| GENE 118 104911 - 105018 63 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDYFIRELDVDEFIVHVQLISDGIERENKAMKGRK >gi|292596534|gb|ADCV01000014.1| GENE 119 105018 - 107354 1672 778 aa, chain + ## HITS:1 COG:no KEGG:BCQ_PT26 NR:ns ## KEGG: BCQ_PT26 # Name: not_defined # Def: phage protein # Organism: B.cereus_Q1 # Pathway: not_defined # 309 645 391 735 978 79 21.0 6e-13 MANKVLEMAIAIKGKLDGGLSSSVSKASQELNKLSNAIKDQQAQYRKLQAISQKTGNVSD RNAAIAAEQKLNSMLQRQAQLRSNIASQTAHQNAISKMGGASPLAGAASAAQGASAAVSG ITGKLASFAMVAAGGFGIGAIIDNVVNAGEALYQLSNKLHMTTAETSQFKKIMTLSGVDV EVAAKSFAKMDKTLAGGGKNAEALQGYLSQFGVSLTDANGKLLPMNQQLDAMAKGYQNAV AQGRGQEFMLETLGAKGLELTKVFENYADAQAAASQIKGVGIDPKSLHEIWLQMNILKAE ATQVALGLAQAFIPIAQQILPALIPVLQAVVTFMRDNKEAIAAVVTNGLKLALLYGTATK LASGITTITTAFKGVETAMGAFKAASALIGGPWVIAIMAIIAAIYLLVTNWDTICATLTS VWDSVCSGLSSIWDSVCSALSSAWSAIISGIMAVINGFLSLGLSVFNALKGAIIAYVNLW LNLPTYIGMAVGFIIGIILRLPAIMVQVGTAVISAVVSFATKCYNFAVTTFGAMVDEIYN FLINLPTYMITLGAEFVAAVISFASEAYATATSWISSLVNDVISFIMNLPSACADAGTEF VAAAEQWASDAYNAVLNWIKQIPSAVSNAISGAWDSIKAQFSGGLTVGVQAAGGNAYANG GVITSPEVALIGEAGYPEVIVPIDGSANAMNLWQTAGRMLGVSGAHTAVAPTVSLAPSVP VTPSSSNSGAPVQITFAPVINASNSSTDDIMSALDAKMREFEQMMRSYTAGQRRLSYD >gi|292596534|gb|ADCV01000014.1| GENE 120 107347 - 107550 171 67 aa, chain + ## HITS:1 COG:no KEGG:Amico_1110 NR:ns ## KEGG: Amico_1110 # Name: not_defined # Def: putative phage tail protein gpX # Organism: A.colombiense # Pathway: not_defined # 1 67 1 68 72 70 45.0 2e-11 MTSYTTIQGDMWDLIAYKVYGNERYINLLLEANQKYHNTAIFSAGVVLTCPDVPADSLPE FLPPWRR >gi|292596534|gb|ADCV01000014.1| GENE 121 107554 - 108714 841 386 aa, chain + ## HITS:1 COG:STM4208 KEGG:ns NR:ns ## COG: STM4208 COG3500 # Protein_GI_number: 16767458 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 42 381 25 341 347 126 29.0 6e-29 MSLQKSLAKVQKWKKDLTPQTKLARRAWCTIGYQHWGSKESKDITDDISKYLLDVTFTDN LSGTVDDVAISLEDRGRLWVGDWYPVKGSLLEVAINTVAWEKLGDEQFTLPIGKFEIDEF EGSSLPDVVKIKGVAIIGSTDLREKKKDKSWKDTTLKAIATEKAKDNKLKLVWDADFDPP LKDASQSAESDLAFLQKLCNDAGFSLKVSTEQLIIFDDYKYENVKPKVIIRRPGGQYQPV QTKEGEQPPLIITRALSYSYKSKTREVYRACHVKYTDKDKKSVIEDTFEDPDRKGHTYLA VLEVNEQVKDKAEATRLAKKKLREANKEADTMSFSFPGNPLIMASVTVKLEGFGVFDGNY LITKATHTLGANYSTSIDVRRCLNGY >gi|292596534|gb|ADCV01000014.1| GENE 122 108704 - 109171 645 155 aa, chain + ## HITS:1 COG:no KEGG:Dred_1217 NR:ns ## KEGG: Dred_1217 # Name: not_defined # Def: phage baseplate assembly protein V # Organism: D.reducens # Pathway: not_defined # 12 154 2 155 159 82 33.0 4e-15 MATDSILSVLADMIFIGNVSSTIPEEGKAVVTRLDREGVVTAPLSVINRGAAHDKDYWMP VIDDQVLCVMLPNRSGRGFSDGFIIGTFFSTADPTPEGADNGKRVLTVPGDMTLNVGGTL SINSSNGDVVVNGISLVHHVHGGVVSGGSTTSGPE >gi|292596534|gb|ADCV01000014.1| GENE 123 109181 - 109657 477 158 aa, chain + ## HITS:1 COG:no KEGG:Amico_1106 NR:ns ## KEGG: Amico_1106 # Name: not_defined # Def: hypothetical protein # Organism: A.colombiense # Pathway: not_defined # 3 129 2 126 129 95 40.0 8e-19 MYIGYLADIVFYTALDNVLTVSDVTRSGSARWEKHNLMLEKPVKQFSGPDVEQITCKILI SASLGQSPDSTVKKLRKYRDTGAVLPFIIGGKPVSQNYFVIMSMSEDSLFTDAYGKTQSI EVSLTLEEYPDKNTVEEKSLLNKYGNKFNQVNTILRRF >gi|292596534|gb|ADCV01000014.1| GENE 124 109660 - 109971 321 103 aa, chain + ## HITS:1 COG:no KEGG:Amico_1105 NR:ns ## KEGG: Amico_1105 # Name: not_defined # Def: gpW/GP25 family protein # Organism: A.colombiense # Pathway: not_defined # 15 103 12 102 106 87 48.0 2e-16 MSATYEIKPTTDNRISLAPESEVAEILQNVQTIISTVRGSVPLDREFGIDGRIIDMPIHQ AQAHLSNDIFQQIKRYEPRAKISDISFAATQNGALIPKVMVTV >gi|292596534|gb|ADCV01000014.1| GENE 125 109968 - 111089 1163 373 aa, chain + ## HITS:1 COG:STM4202 KEGG:ns NR:ns ## COG: STM4202 COG3948 # Protein_GI_number: 16767452 # Func_class: R General function prediction only # Function: Phage-related baseplate assembly protein # Organism: Salmonella typhimurium LT2 # 10 346 7 345 371 180 34.0 4e-45 MRLSDLPNVEFFNTDKEHVQQKVFDIYTTITGRTLGEGDPVTLFLNVISEIIIRLLNDAN YAAKQNLLAYAEGDNLDHVGAVPAAVERLQATKATTTIKAILSAVRTNSVIIPKGTRIAT EGGEYFATVEDLVILPGQLNGSVKAEAQRTGAQGNGFKPGEISTIIDPIAYVDTMSNTTL SEGGSDKEDDEAYRERIHEAPESFSVAGPEGAYEYFTKSASHLVADVGVSSPHPGEVNIY PLLSGGGIPGQELLKTITDYLSDKKRRPLTDKLTVLAPTTTQYNIDAKYYIEKGADATVV KAKADKAVNDYVIWQKSKLGRDIVPSRLVQMLMDVSGIKRVEVTAPVFTPIAEQSGVAVA NTIAVVFAGSEEE >gi|292596534|gb|ADCV01000014.1| GENE 126 111086 - 111745 315 219 aa, chain + ## HITS:1 COG:STM4201 KEGG:ns NR:ns ## COG: STM4201 COG4385 # Protein_GI_number: 16767451 # Func_class: R General function prediction only # Function: Bacteriophage P2-related tail formation protein # Organism: Salmonella typhimurium LT2 # 41 158 33 154 210 77 39.0 2e-14 MIRDSKYTSAEHLPSSIDKEPIKAIAKTWDDTLAEFMNTNTLLLWSSIDSEPESVIDHLA YQLHVDDYDSGLPIETKRELVKNSIDIHRHKGTPYAVERAVQTVYSDSKIAEWFEYDGRP YYFKITLITAPLNGEADIAKLVRAINTAKNVRSWLDGIEFIRRINFNKYFAGWCGVSKKV NIKCDFTNVWRINLNTHVTSYTVESKKTKINVVLDNSVR >gi|292596534|gb|ADCV01000014.1| GENE 127 111755 - 112640 865 295 aa, chain + ## HITS:1 COG:no KEGG:Sterm_1448 NR:ns ## KEGG: Sterm_1448 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 1 153 1 155 272 68 35.0 3e-10 MAEWSNATMTDVGANLQAKVNAGKTNLTFTKIKVGSGVNSTNPLALTDVISSKWETTNFV VKLEGKIVSVDTVITNTGIHEAFRMSEIGLFAQDPDKGEILYAYLTDPEPDRMPAESGSV VVSQELTIGMVFSNTGNVSLTVNMGALVTREQLTEAVKQHNTDISSHPAITAMIAKILGA TNWQENPVATLKDIKNLIGQGAIVASKLDANAGFVKFANGFTIQWGLTWFDSNKYYKDIS LPISSTVLIALATDDSVSVATSGSECFITWNSGFSQANRNIIRFLTNRVDTGSFG Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:25:31 2011 Seq name: gi|292596533|gb|ADCV01000015.1| Veillonella sp. 3_1_44 cont1.15, whole genome shotgun sequence Length of sequence - 70235 bp Number of predicted genes - 77, with homology - 72 Number of transcription units - 39, operones - 22 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 42 - 260 88 ## gi|238018871|ref|ZP_04599297.1| hypothetical protein VEIDISOL_00731 2 1 Op 2 . - CDS 275 - 1126 323 ## COG0582 Integrase - Prom 1164 - 1223 4.5 3 2 Tu 1 . + CDS 1153 - 1545 502 ## gi|294795038|ref|ZP_06760173.1| hypothetical protein HMPREF0873_01655 + Prom 1603 - 1662 3.0 4 3 Op 1 . + CDS 1705 - 2256 191 ## gi|294795040|ref|ZP_06760175.1| hypothetical protein HMPREF0873_01657 5 3 Op 2 . + CDS 2249 - 2641 238 ## gi|294795041|ref|ZP_06760176.1| hypothetical protein HMPREF0873_01658 6 3 Op 3 . + CDS 2642 - 3217 583 ## gi|294795042|ref|ZP_06760177.1| hypothetical protein HMPREF0873_01659 7 3 Op 4 . + CDS 3234 - 3758 318 ## gi|294795043|ref|ZP_06760178.1| conserved hypothetical protein + Term 3823 - 3876 11.4 + Prom 3859 - 3918 8.2 8 4 Tu 1 . + CDS 3938 - 4255 156 ## gi|294795044|ref|ZP_06760179.1| hypothetical protein HMPREF0873_01661 + Term 4451 - 4486 5.1 - Term 4438 - 4473 5.1 9 5 Tu 1 . - CDS 4483 - 4593 67 ## - Prom 4680 - 4739 3.4 + Prom 4519 - 4578 5.2 10 6 Tu 1 . + CDS 4627 - 5268 419 ## Vpar_0386 hypothetical protein + Term 5317 - 5360 6.5 - Term 5305 - 5348 10.3 11 7 Tu 1 . - CDS 5378 - 6751 1252 ## COG2271 Sugar phosphate permease - Prom 6791 - 6850 3.8 + Prom 6807 - 6866 10.3 12 8 Op 1 . + CDS 6963 - 7175 366 ## Vpar_0388 hypothetical protein 13 8 Op 2 . + CDS 7215 - 7289 73 ## - Term 7116 - 7149 3.1 14 9 Tu 1 . - CDS 7277 - 8068 780 ## COG0388 Predicted amidohydrolase - Prom 8119 - 8178 5.2 15 10 Op 1 . + CDS 8376 - 8837 404 ## Cbei_3418 nitroreductase 16 10 Op 2 . + CDS 8906 - 9709 828 ## COG0726 Predicted xylanase/chitin deacetylase 17 10 Op 3 . + CDS 9721 - 10659 1085 ## COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 18 10 Op 4 . + CDS 10668 - 11615 987 ## Vpar_0393 hypothetical protein + Term 11622 - 11663 7.5 19 11 Op 1 . + CDS 11688 - 12863 768 ## COG0859 ADP-heptose:LPS heptosyltransferase 20 11 Op 2 . + CDS 12850 - 13176 413 ## Vpar_0395 hypothetical protein + Term 13217 - 13256 8.2 21 12 Tu 1 . - CDS 13195 - 13260 89 ## - Prom 13292 - 13351 4.2 22 13 Tu 1 . + CDS 13722 - 15074 1852 ## COG5016 Pyruvate/oxaloacetate carboxyltransferase + Term 15089 - 15122 3.1 23 14 Op 1 40/0.000 + CDS 15525 - 16865 920 ## COG0642 Signal transduction histidine kinase 24 14 Op 2 7/0.000 + CDS 16862 - 17551 1001 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 17697 - 17748 1.3 + Prom 17914 - 17973 9.9 25 14 Op 3 . + CDS 18220 - 19317 1546 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 19380 - 19422 9.8 + Prom 19368 - 19427 8.5 26 15 Op 1 . + CDS 19652 - 19993 218 ## PROTEIN SUPPORTED gi|42783874|ref|NP_981121.1| 30S ribosomal protein S14 homolog-related 27 15 Op 2 . + CDS 19980 - 20555 714 ## Vpar_0401 hypothetical protein 28 15 Op 3 . + CDS 20565 - 20975 483 ## Vpar_0402 hypothetical protein + Term 21118 - 21163 13.2 - Term 21206 - 21239 3.1 29 16 Op 1 9/0.000 - CDS 21248 - 21835 903 ## COG0461 Orotate phosphoribosyltransferase 30 16 Op 2 . - CDS 21832 - 22551 893 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 22696 - 22755 6.7 31 17 Op 1 . + CDS 22740 - 23369 674 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 32 17 Op 2 7/0.000 + CDS 23384 - 24046 683 ## COG0274 Deoxyribose-phosphate aldolase + Term 24054 - 24088 6.0 33 17 Op 3 4/0.000 + CDS 24100 - 25401 1610 ## COG0213 Thymidine phosphorylase 34 17 Op 4 . + CDS 25412 - 25807 361 ## COG0295 Cytidine deaminase + Term 25812 - 25846 4.0 - Term 25791 - 25844 9.1 35 18 Tu 1 . - CDS 25847 - 26665 1172 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 26704 - 26763 6.5 - Term 26735 - 26794 17.2 36 19 Tu 1 . - CDS 26808 - 27710 747 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase - Prom 27884 - 27943 6.8 37 20 Tu 1 . + CDS 27646 - 27810 166 ## + Prom 27834 - 27893 12.1 38 21 Op 1 . + CDS 27956 - 28900 773 ## Vpar_0412 hypothetical protein 39 21 Op 2 . + CDS 28900 - 29697 892 ## Vpar_0413 hypothetical protein + Prom 29745 - 29804 3.8 40 22 Op 1 . + CDS 29830 - 30201 662 ## COG0251 Putative translation initiation inhibitor, yjgF family 41 22 Op 2 . + CDS 30203 - 31450 1448 ## COG3681 Uncharacterized conserved protein + Term 31501 - 31551 8.9 42 23 Tu 1 . - CDS 31564 - 32751 1399 ## COG0477 Permeases of the major facilitator superfamily - Prom 32793 - 32852 4.9 - TRNA 32810 - 32900 67.4 # Ser CGA 0 0 - Term 32763 - 32794 3.4 43 24 Tu 1 . - CDS 32854 - 33399 516 ## COG0590 Cytosine/adenosine deaminases + Prom 33371 - 33430 8.1 44 25 Tu 1 . + CDS 33483 - 34109 580 ## COG2860 Predicted membrane protein + Prom 34149 - 34208 7.1 45 26 Op 1 . + CDS 34258 - 36072 2555 ## Vpar_0419 hypothetical protein 46 26 Op 2 . + CDS 36083 - 37204 751 ## Vpar_0420 hypothetical protein + Term 37322 - 37373 7.2 + Prom 37378 - 37437 6.1 47 27 Op 1 . + CDS 37487 - 38344 1178 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 48 27 Op 2 32/0.000 + CDS 38400 - 39446 1202 ## COG1135 ABC-type metal ion transport system, ATPase component 49 27 Op 3 . + CDS 39427 - 40080 773 ## COG2011 ABC-type metal ion transport system, permease component 50 27 Op 4 . + CDS 40090 - 40386 463 ## COG4496 Uncharacterized protein conserved in bacteria + Term 40396 - 40444 6.9 51 28 Op 1 1/0.000 + CDS 40452 - 41246 852 ## COG0730 Predicted permeases 52 28 Op 2 . + CDS 41258 - 42025 224 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Prom 42050 - 42109 9.4 53 29 Op 1 . + CDS 42152 - 43003 1164 ## Vpar_0427 hypothetical protein 54 29 Op 2 . + CDS 43026 - 43370 379 ## COG3339 Uncharacterized conserved protein + Term 43385 - 43426 7.5 + Prom 43400 - 43459 6.9 55 30 Op 1 . + CDS 43487 - 43906 351 ## COG0824 Predicted thioesterase 56 30 Op 2 . + CDS 43899 - 44702 919 ## COG0796 Glutamate racemase 57 30 Op 3 . + CDS 44715 - 45254 785 ## Vpar_0431 hypothetical protein 58 30 Op 4 . + CDS 45267 - 45917 1011 ## Vpar_0432 protein of unknown function DUF129 + Term 45920 - 45970 11.2 + Prom 45950 - 46009 6.4 59 31 Op 1 1/0.000 + CDS 46113 - 47825 2027 ## COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit 60 31 Op 2 . + CDS 47815 - 49233 1397 ## COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein + Term 49342 - 49374 3.9 + Prom 49278 - 49337 7.3 61 32 Op 1 8/0.000 + CDS 49397 - 50152 951 ## COG0689 RNase PH 62 32 Op 2 7/0.000 + CDS 50154 - 50729 432 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 63 32 Op 3 . + CDS 50796 - 51293 576 ## COG0622 Predicted phosphoesterase 64 33 Tu 1 . + CDS 51371 - 52153 773 ## COG1586 S-adenosylmethionine decarboxylase + Term 52159 - 52195 -0.4 + Prom 52322 - 52381 9.8 65 34 Tu 1 . + CDS 52442 - 53647 1773 ## COG0281 Malic enzyme + Term 53701 - 53738 6.2 + TRNA 54028 - 54104 92.9 # Pro TGG 0 0 + TRNA 54115 - 54188 83.6 # Gly TCC 0 0 + TRNA 54290 - 54366 91.4 # Arg TCT 0 0 + Prom 54334 - 54393 31.0 66 35 Op 1 . + CDS 54453 - 55943 559 ## Vpar_0440 hypothetical protein 67 35 Op 2 . + CDS 55918 - 57018 552 ## Vpar_0441 hypothetical protein + Term 57222 - 57282 2.2 68 36 Op 1 . - CDS 57036 - 58247 414 ## COG0582 Integrase 69 36 Op 2 . - CDS 58216 - 60801 1304 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 70 36 Op 3 . - CDS 60808 - 62724 971 ## COG3505 Type IV secretory pathway, VirD4 components 71 36 Op 4 . - CDS 62729 - 63025 343 ## Vpar_0445 hypothetical protein - Prom 63186 - 63245 5.7 - Term 63196 - 63247 4.3 72 37 Op 1 . - CDS 63344 - 63496 78 ## 73 37 Op 2 . - CDS 63511 - 63690 196 ## Vpar_0446 hypothetical protein - Prom 63798 - 63857 11.6 + Prom 63785 - 63844 11.6 74 38 Op 1 . + CDS 63888 - 64727 582 ## Vpar_0447 transcriptional regulator, XRE family 75 38 Op 2 4/0.000 + CDS 64751 - 66691 1694 ## COG2189 Adenine specific DNA methylase Mod 76 38 Op 3 . + CDS 66693 - 69650 1419 ## COG3587 Restriction endonuclease + Term 69661 - 69703 5.6 77 39 Tu 1 . + CDS 70081 - 70234 85 ## COG1943 Transposase and inactivated derivatives Predicted protein(s) >gi|292596533|gb|ADCV01000015.1| GENE 1 42 - 260 88 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|238018871|ref|ZP_04599297.1| ## NR: gi|238018871|ref|ZP_04599297.1| hypothetical protein VEIDISOL_00731 [Veillonella dispar ATCC 17748] # 1 72 230 301 301 133 95.0 3e-30 MGGQDNVTKTEVRFPIKFTTLFMANAIDAYWSGSDTPRYFANSVSESNATKAVFSASDRY AASYYWFALGII >gi|292596533|gb|ADCV01000015.1| GENE 2 275 - 1126 323 283 aa, chain - ## HITS:1 COG:SSO0375 KEGG:ns NR:ns ## COG: SSO0375 COG0582 # Protein_GI_number: 15897309 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Sulfolobus solfataricus # 107 276 101 275 291 68 34.0 1e-11 MRRYAVILNRRQRNTITLRQLFNEWLPIHSQSISNSAVKSYHIAFKHISNIADMPITDIH FQHLQNVINSMHVKGLSYSSCKKVRTLLNQLFNYAIIKDYPITNYVIHLTLGPNIPTIRR RVFTRQQINKLWEVDTSYSHMILILLYTGLRIGELLNLRKQDIHRRSSYLIVRHAKTKAG EGRIIPIHHRIMPLIEQVYTSTEAYLFTISYTTFHKNFKDIMKQLNCKHTIHDTRHTFAS LLDSVAPPNTLRSLLGHKQGDITTRVYTHKTIRELRKAVELLK >gi|292596533|gb|ADCV01000015.1| GENE 3 1153 - 1545 502 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795038|ref|ZP_06760173.1| ## NR: gi|294795038|ref|ZP_06760173.1| hypothetical protein HMPREF0873_01655 [Veillonella sp. 3_1_44] # 1 130 1 130 130 230 100.0 2e-59 MNQYVFILNEQGERITSFVDNTVSKDELLDHAKKEWPDAADYIYSADGDSMLDEFMKGKF YVDGKFIEPQAKEPTKAEKIAEIRSYYNKRFETLEQMVLRRRLINGDISDLQEQFKKLNQ EMVLKIKAVK >gi|292596533|gb|ADCV01000015.1| GENE 4 1705 - 2256 191 183 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795040|ref|ZP_06760175.1| ## NR: gi|294795040|ref|ZP_06760175.1| hypothetical protein HMPREF0873_01657 [Veillonella sp. 3_1_44] # 1 183 1 183 183 361 100.0 1e-98 MNILNDILTMLISGISHEHIVSMGVVIILTTTLLFVDTIQRIAAEVLRYNKDNHRPNNPI TLLTTLAWYGWGKGRYIDETTGERRRYLMSERLRGDLLKKLCVQYPAWMILSIVFISLPD IPIPNTDLFLDHLFSYAFMLIPFLAECWSIIENLREMVEDDLIDIGKMFQYTIEIIKAWR GNG >gi|292596533|gb|ADCV01000015.1| GENE 5 2249 - 2641 238 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795041|ref|ZP_06760176.1| ## NR: gi|294795041|ref|ZP_06760176.1| hypothetical protein HMPREF0873_01658 [Veillonella sp. 3_1_44] # 1 130 1 130 130 238 100.0 1e-61 MDKLAIINRIKRSYQSIRIAGIRPTGVLATRALVLVMLVPMILVVVQYVLSTINGYVAPE ANQLIDKGILIIDHIFVPSVLMSIVGLCGMFIDKNHNGIPDKLEEPNTLPVNRPGIQQLA DDVNHDERGK >gi|292596533|gb|ADCV01000015.1| GENE 6 2642 - 3217 583 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795042|ref|ZP_06760177.1| ## NR: gi|294795042|ref|ZP_06760177.1| hypothetical protein HMPREF0873_01659 [Veillonella sp. 3_1_44] # 1 191 1 191 191 377 100.0 1e-103 MFRQLTMDELKSLALDAYGKIEKAYLHWTGVKGGKHFKDYHINIDREGTMWTDMEALTDY KEHTYMRNSNAVGIAIEACWDAVSENNLGSEPPTKAQLVTMTQIMAVLTINAGVPLDIQH QMTHAEAADNKDGLDLYYLDPTGYPNNTYGPDSNVDRWDLLVCHEGDERWSGGDWLRGTA RWWGAQWGSTI >gi|292596533|gb|ADCV01000015.1| GENE 7 3234 - 3758 318 174 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795043|ref|ZP_06760178.1| ## NR: gi|294795043|ref|ZP_06760178.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 1 174 35 208 208 221 100.0 2e-56 MKLSKTELFLHLLKIALLLVFLVLSSSISHAASSEDTSTQEPTISVPVSSWNELKGRLMK AESSINNSEKALQQANSLTATQGIALTELKIINEERTKELNALKAINEKQGQELTKASNL LTTQEAKLNEASTSLEELTEQIKRNKRTEQRLKRQRDTWAVVSGVFGLAGAIRR >gi|292596533|gb|ADCV01000015.1| GENE 8 3938 - 4255 156 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|294795044|ref|ZP_06760179.1| ## NR: gi|294795044|ref|ZP_06760179.1| hypothetical protein HMPREF0873_01661 [Veillonella sp. 3_1_44] # 1 105 1 105 105 214 100.0 1e-54 MLKVFNKDPHFMRDAVKVDNYTAAWDIICSMQERLGQGILLVGRETWEDLRLAEHFPDFV WADDVKAVYVNSDKTLIIAAPSKYNRANVLKLIKFFGLHYSIREI >gi|292596533|gb|ADCV01000015.1| GENE 9 4483 - 4593 67 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYITNYYDCTRIVKTCQHFSGLKGEDKLIKYILISK >gi|292596533|gb|ADCV01000015.1| GENE 10 4627 - 5268 419 213 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0386 NR:ns ## KEGG: Vpar_0386 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 213 1 213 213 400 94.0 1e-110 MVFNYGETLRIRRDLYTILGKIRYIDTHGKIGYEYKLVRHKNNAEFWLSWDKKRDAYQFS KLCGKALPADMKLIDSGYEMVTGTWGEVDVGTTDTAKYKEYENADGTATFSVQEWAFETE YSKGFYINKEYVSVEKDSEVTESILDKMDTIKKLKFIGPIGWILGNLLLYMPIFDIKILN DVRDVLTWPYIVAGSIVLGIIVVCAFIISRTMR >gi|292596533|gb|ADCV01000015.1| GENE 11 5378 - 6751 1252 457 aa, chain - ## HITS:1 COG:STM2399 KEGG:ns NR:ns ## COG: STM2399 COG2271 # Protein_GI_number: 16765725 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate permease # Organism: Salmonella typhimurium LT2 # 1 441 1 444 463 540 62.0 1e-153 MFSFLQPKEAKSSVPQSMIMNLYYKYRLQSLIGIFIGYAAYYIVRNNFALSTHFLSDILH MSKTEIGLLSSGMLIAYGLSKGFMSSLADKASPAKFMAFGLICCAIINIFMSFADSLAFF LVLVVLNGFFQGFGVGPSFITLAKWYPKQERGRYGAIWNISHNLGGGIVAPIVAAALYFT TTDHWQLGSYGVPALIAVIIAIAISFLIKESPEREGLPPTSEIIADTAHKAHRSSEAPHM STREIFVKYVLKNKNAWYVSLVDTFVYMIRFGMLTWLPIYLLQVKGFSKAEMSVAFLFFE WAAIPSTIFAGYISDKFFKGYRMPPAIIAISIIFFCIFGYWQSESLLWVTFFAAIVGCLI YIPQFLASVQTMDIVPPFAVGSAVGLRGFMSYIVGANLGTTLFGVLADKFGWNAGFYLLL VACVLCITFCVLAHFGAKELDAKEAELEQLQPAEANS >gi|292596533|gb|ADCV01000015.1| GENE 12 6963 - 7175 366 70 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0388 NR:ns ## KEGG: Vpar_0388 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 70 1 70 70 106 92.0 3e-22 MKYLRRELNQVEKEYVKQFGEDSLNRVILHDPDTKDKQDVQDTIDILKGAIAKNKPLEQV PEEMWKLIEF >gi|292596533|gb|ADCV01000015.1| GENE 13 7215 - 7289 73 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRPSINELFKMVVKNNVPLFYSL >gi|292596533|gb|ADCV01000015.1| GENE 14 7277 - 8068 780 263 aa, chain - ## HITS:1 COG:lin0310 KEGG:ns NR:ns ## COG: lin0310 COG0388 # Protein_GI_number: 16799387 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Listeria innocua # 4 261 3 259 259 213 41.0 3e-55 MKKRLSLIQMDVHVNEVEYNYARVQELLSQALSEKPDIIVLPETWNTGFHPSKDLINISD RNGERTKALLSTFAKEHNVNIVGGSVAVAKEDLVFNTSYAYNREGKLVGEYSKMHGFSPA KEDQYFASGTHTTHFELDGIPCSTVICYDIRFPELVRMAALSNTELLFVPAQWPTMRLRH WQVLNEVRAIENQLFLCAVNGCGTVGRVQSTGHSAVYDPWGTNLLEMDTREGISSVDIDL TVVEDIRNKINIFKDRKPELYKL >gi|292596533|gb|ADCV01000015.1| GENE 15 8376 - 8837 404 153 aa, chain + ## HITS:1 COG:no KEGG:Cbei_3418 NR:ns ## KEGG: Cbei_3418 # Name: not_defined # Def: nitroreductase # Organism: C.beijerinckii # Pathway: not_defined # 2 150 35 184 187 112 37.0 6e-24 MRAPSPKNRQPWQVIHVIGAEKEHFVNLGFQVLEQYKERKEHFGSLEISLKAMQTASDIL FVVNPYDHLPDYTRVWEKSDLQAIGAFIEHILLGAKAIGLGTLWMNDVYFMQSESKAFLN IPHDVQAIIAIGIPDESMYPRPRKSIDEVLIKR >gi|292596533|gb|ADCV01000015.1| GENE 16 8906 - 9709 828 267 aa, chain + ## HITS:1 COG:CAC0436 KEGG:ns NR:ns ## COG: CAC0436 COG0726 # Protein_GI_number: 15893727 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 48 267 55 277 295 154 37.0 2e-37 MKRIPLVTLLVLVLAMVVAGCGLLSQKTEPTSSVPPAKEVKMVHPTGIPVLMYHKVGDDK DNDAVIREDLFREQMKFLKDNGYNPLTMDQLYEYVVNGAAVPEKPVVLTFDDGYADTYSI VYPIMKEYGFPATVFINPGDVGTRLTWDQVREMHKNGITISNHGFQHIEMGQLSEAKQIE NITKAQEALAKEVGIKDNPWFCYPYGDKNEFTDSASKKAGIKMGMAMKSGWAHTGDNPYN ILRVWVGNAVDIKHFEERISTEHFTDL >gi|292596533|gb|ADCV01000015.1| GENE 17 9721 - 10659 1085 312 aa, chain + ## HITS:1 COG:CAC2633 KEGG:ns NR:ns ## COG: CAC2633 COG4632 # Protein_GI_number: 15895891 # Func_class: G Carbohydrate transport and metabolism # Function: Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase # Organism: Clostridium acetobutylicum # 4 312 29 353 354 223 39.0 5e-58 MFKKNWVKFIIMVFLFTVVTSPFVVLFGPFNNVKRAVIGAILQSRHPHYITWLFNEDELQ SILGTVGVVKSQDLFKFNAREDKTLNLEKIQSARYVGYILEIPDPRRIQVGTAANIQEKG DTTSNIAKMNNAVAAINGGGFHDPNGTGTGRLPYGFILHDGEYVIGKDVGPDEDVDFVGF SKSGNLIAGNYDKTQLSDMKAMEGITFGPPLIVDGKKMITEGDGGWGVGPRTAIGQKKDG TVLFLVIDGRQPGYSIGATLRDVQDILFEKGCYIAANLDGGSSSTLYLNGKVVNKPADLL GERMIPTAFIVK >gi|292596533|gb|ADCV01000015.1| GENE 18 10668 - 11615 987 315 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0393 NR:ns ## KEGG: Vpar_0393 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 301 1 301 315 573 99.0 1e-162 MKPFTRVLSAFAVGILLQGGVYLYLDQYMFAPTTEFNVAGASKDDTKNFPDVKEGTKYVS YDRQFMAVVTENSLKIYKANESKPTNIDLKGRSISYFNWMPDRNYAVMGLYDSRDVVMAR LNADDPEHEVDTKLEDLPRGSKIVDAAYSEATNVVYMKVKVQEHTYRIYRTDANYDTRRV YMQATDIGHIGVFYDEDNFFYDNVRTGDVFMFNGIEGGWRVINPEGRFRFIGVDMDKTIY IARVDEDNNALTVYTGKLGVGFNPVYKYNHPTTFNELTLSDVKNIIKNGSEETTKVTEDA TSSKSSNSSGSKKKS >gi|292596533|gb|ADCV01000015.1| GENE 19 11688 - 12863 768 391 aa, chain + ## HITS:1 COG:FN0544 KEGG:ns NR:ns ## COG: FN0544 COG0859 # Protein_GI_number: 19703879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ADP-heptose:LPS heptosyltransferase # Organism: Fusobacterium nucleatum # 1 390 1 336 342 103 27.0 5e-22 MNILFVRLSYIGDVLHATPAARWIKEQYPDAKLHWIVTPSMAELLQGNPYVDKIIPWERD IYEAHSKKLHIPTMWRMWWDLKAKLEPYKFDVAVDVQGRLITGLVLLASGAPIRLGLGGT KELNWLFTNYKTKPSTEHVIKRYVEVAQLLTKAITEHANLDTSLNIDKYGIESSCSLNES NANMLYHMDFQVPTNLHSWAEEQWKSIDNDVSLHRGVVETPLRIGLVLGTSWATKEWPQE KWYSLIKSLQYRANFVCLGGPKEATQYKPLLDSLTDESIDKIVLNMLGKTTLQELGALIE SCDVVVTADTGALHIALALNKPVVALFGPTDPKLWGPLTGTFKVLVNDELDCLGCRKRRC PKPDQYCMSGIEPVRVKKAIFELIGDTHGKV >gi|292596533|gb|ADCV01000015.1| GENE 20 12850 - 13176 413 108 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0395 NR:ns ## KEGG: Vpar_0395 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 108 1 108 108 164 99.0 1e-39 MAKFKIQKGLSDADMMKNFKDTENFEDTMLNMERDAKKPVVHQSPKQKEDAFYREFLTEK VETIIGKMLLDIKMEYFKEGEGAFSIQVKREGKNIVLETAPKKVKPEK >gi|292596533|gb|ADCV01000015.1| GENE 21 13195 - 13260 89 21 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHKHTKEPVHLRTGSDVIFKV >gi|292596533|gb|ADCV01000015.1| GENE 22 13722 - 15074 1852 450 aa, chain + ## HITS:1 COG:MA0674_1 KEGG:ns NR:ns ## COG: MA0674_1 COG5016 # Protein_GI_number: 20089559 # Func_class: C Energy production and conversion # Function: Pyruvate/oxaloacetate carboxyltransferase # Organism: Methanosarcina acetivorans str.C2A # 4 445 2 440 467 485 55.0 1e-137 MAKKLRICETVLRDGHQSILATRMRYEQMEPVLGLLDDIGYEALECWGGATYDSCLRFLN EDPWERLRKLKANLKNTPLQMLLRGQNLLGYKHYSDDVVEAFCNAAVKNGIDRIRIFDAL NDPRNMEAAIKYSKKAGAHVQSAMVYTISPVHTTESFLKVAETLVEMGTDSLCIKDMSGL LGPADAYDLVSTFKKRFGELPIDLHSHFTCGLASTTYWEAAKAGVDIIDTAISPFAHATS QPATETMIEMFKGTEWDLGLDLDKYIPLVDHFRKVKQQIAEEFNLKPASDVIPAVRRYQI PGGMLSNTQNQLNEMGMGDRFFDVMDEMPRVREDLGYPPLVTPTSQIVGTMAMMNVMMGD RYKMVPNEVKDLVRGKYGALPGTISDDIRRTIIGDEEPITCRPADLIEPELEGYRQDLAS KGYNGITDEDVLTYAMFPEVAINFFDANRR >gi|292596533|gb|ADCV01000015.1| GENE 23 15525 - 16865 920 446 aa, chain + ## HITS:1 COG:CAC0317 KEGG:ns NR:ns ## COG: CAC0317 COG0642 # Protein_GI_number: 15893609 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 199 435 250 487 498 125 30.0 1e-28 MNLQIRIWISNVVLFVVPILIAIILFLLYFTGLRILANAGYYLRIEQEQQFKSVSRITET ITFYGLENDLINSLVKPSYSLLDPKEVYVEVLDQGNMVYNYGNPQIYSASAIVGLIDVNP ELQGIVYQSNNTFVYEMRKYDGRHSYVYHIAIRRATHGSDSLMESVSFYIIVVSILLFIV TFFAINRFVTRFIMIHVKNMTKSLEMANRQIEMEQEQQKELLAGISHDIRTPLTAIKAYA EGVRDGIAPTEEQQKRYMGIILKRANDLDSMLEELFLITTLNYKKESRPSERIELGQFVH DFVEDHLAPYQSKGLEIKARIATETPFINANPQLLQRVLQNVLNNSAKYKMADIGHCVID VTSDDDFVYCVISDDGPGVPPESLERLMRPFYRVDSSRTNPQEGSGLGLSIIRRIMEIFE GRVMIENVRPHGLRIILEFPKQGEES >gi|292596533|gb|ADCV01000015.1| GENE 24 16862 - 17551 1001 229 aa, chain + ## HITS:1 COG:CAC0321 KEGG:ns NR:ns ## COG: CAC0321 COG0745 # Protein_GI_number: 15893613 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 3 228 2 228 230 224 51.0 7e-59 MSEHILIIEDDLDIANIERDYLMVAGYDVTIMTNGTDGIEAALNTPVDLIILDVMLPEMD GFEVCRQIRDKVRVPIVMVTARLDDIDKIRGLGVGADDYIEKPFSPSVLIAKIKAMLAQY KRLTERDAMETNAIQSGEIRLDPKMMKVWVNEKEVHLKKKEFQLLEFLMRNRDIVFSKEE LYSRVWGLDSYGDYATVAVHINRLREEIEDNPSDSKHIITVWGVGYKFV >gi|292596533|gb|ADCV01000015.1| GENE 25 18220 - 19317 1546 365 aa, chain + ## HITS:1 COG:BS_yyxA KEGG:ns NR:ns ## COG: BS_yyxA COG0265 # Protein_GI_number: 16081088 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Bacillus subtilis # 35 362 59 395 400 204 39.0 2e-52 MTFSKYKKTVIACILALGIGVGGGYYFFGSPVNTQPTNVREQTKQTKPITETRNTYVVQA AKESGPAVVGITTQVFQKDIFNRTIYAGEGVGSGVLIDNDGHIVTNKHVVAGAKNGEVTV SLSDGSTVTGTVIGSDSQTDLAVVKIKPPKDIKPIKIGDSDSLQVGEPAIAIGNPLGLEF KGSVTSGVISALARTIDDQGQRFPLIQTDAAINPGNSGGALINADGELIGINSAKISKEG IEGMGFAIPINSAMTIVDSIIKNGKVIRPYIGVWAVDRQTAARNNVTYEGDGLLIVQLDS NGPAAQAGLVEGDTIAQIDGKDITTLLELKEQIDAKSPGDTILVSYTHNGKMKSTQLKLG EASSN >gi|292596533|gb|ADCV01000015.1| GENE 26 19652 - 19993 218 113 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42783874|ref|NP_981121.1| 30S ribosomal protein S14 homolog-related [Bacillus cereus ATCC 10987] # 1 108 3 112 114 88 38 8e-17 KGGTMQVQLKKGVMDMLVLALLTQNDRYGYEIVSTISEYIEISEGTIYPLFNRLKKEKYV ETYLKESSTGPSRKYYHITNEGRAAYNKMRQEWDEFSGAINMLLKGVDNNEQK >gi|292596533|gb|ADCV01000015.1| GENE 27 19980 - 20555 714 191 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0401 NR:ns ## KEGG: Vpar_0401 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 191 1 191 191 331 94.0 9e-90 MNKNSFLDALRNIFKKARVADVESIIEVYEEHFAVGYEKGLTDSEIIKSLGTPEEIYASY VDAGIITDTMNQDGSESKSVNMQEIYARFDDYKERLLPQLPGMAKKASKTLLSIGSALSY IVGALIFIITPAILFLLGSSWQPFENVTAFPVLSIVTLVALGGVGLFGGLTCIFIGIELR GVRERYFSNVD >gi|292596533|gb|ADCV01000015.1| GENE 28 20565 - 20975 483 136 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0402 NR:ns ## KEGG: Vpar_0402 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 115 1 115 116 164 99.0 1e-39 MRRIIIAAILTVISAVGVGTSFAVNDLPNFGEWMKTNEQQFRKPHRHDGSNMHMDQHMMD GNNQMMPQNGMGPNNGQHMYQNCQNQMMPQDGMGRNNGQYMHQNGQMPPQGQPPQQTNGN APQQQSDQGAPQTTQN >gi|292596533|gb|ADCV01000015.1| GENE 29 21248 - 21835 903 195 aa, chain - ## HITS:1 COG:TM0331 KEGG:ns NR:ns ## COG: TM0331 COG0461 # Protein_GI_number: 15643099 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Thermotoga maritima # 7 195 2 187 187 184 47.0 1e-46 MMTEQEVKQLLIDTQAILEGHFLLTSGLHSPMYVEKFNVLQHPKYTEKLCKELAERFRNQ NVELVIGPMTGGILLAHEVGKALGTRAIFTEREKGVMTLRRGFKIEPGTRVLIVEDIVTT GGSVQEVVNVVNQSGGEIVGVGLLVNRSGGKAEFGVPHEKVQALLNLKVPTYKPEECPLC KDGIAMTERGSKHIK >gi|292596533|gb|ADCV01000015.1| GENE 30 21832 - 22551 893 239 aa, chain - ## HITS:1 COG:alr2983 KEGG:ns NR:ns ## COG: alr2983 COG0284 # Protein_GI_number: 17230475 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Nostoc sp. PCC 7120 # 1 237 1 237 238 182 42.0 5e-46 MADDRLIVALDVSTMDAVKEIVLSLGDSVSFYKVGMELFYAEGAKTIRFLQEQNKQVFLD LKLHDIPNTVAHGVASLTRLGASLITLHGQGGPVMMKAAVEAAHESGKELGVERPKLLAI TALTSFDDESWTAIGGQLPISDQVIRLAKLAKDCGMDGVVCSALEAKMIREACDDDFLIV TPGIRPSFATTDDQKRVATPASALQDGASRLVIGRPITQAENPREAVRLIIEEMEKVSK >gi|292596533|gb|ADCV01000015.1| GENE 31 22740 - 23369 674 209 aa, chain + ## HITS:1 COG:CAC0738 KEGG:ns NR:ns ## COG: CAC0738 COG0847 # Protein_GI_number: 15894025 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Clostridium acetobutylicum # 2 180 1 178 306 150 40.0 1e-36 MLDFVALDFETANKFKNSACSLAVITVKDGQITKKAYSLIKPPFMSFDDECIEIHGIQPK DVLHEKTFDELWNAIYENHLKGNIMVAHNAKFDMNVLRATLDYYKIPWPELDYACTVKLS RAVWPDLVNHKLNTMAAYIGVEFKHHYALDDAETCAKVVLEAAKLKGVNSLPDLLKTTGV PLEPFIDDKNRSAQDALHKEPEPEQMSFF >gi|292596533|gb|ADCV01000015.1| GENE 32 23384 - 24046 683 220 aa, chain + ## HITS:1 COG:SPy1867 KEGG:ns NR:ns ## COG: SPy1867 COG0274 # Protein_GI_number: 15675686 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Streptococcus pyogenes M1 GAS # 4 214 4 215 223 214 53.0 7e-56 MLGKELLAYVDHTLLRPTATWDDIKEVCEDGIRYKTASVCIPPDFVASAHEAYPELNICT VIGFPLGYETTEVKVAETKQAIEEGASEIDMVINLGDVKQGDFEAVTSEIEALKKACGDK ILKVIIETCYLTDSEKVALCKCITNGGADYIKTSTGFGSGGASLEDIRLFKKHIGPNVQI KAAGGIRSITDMKAYIAEGCSRIGASAAVELLKNHLNEEV >gi|292596533|gb|ADCV01000015.1| GENE 33 24100 - 25401 1610 433 aa, chain + ## HITS:1 COG:TM1653 KEGG:ns NR:ns ## COG: TM1653 COG0213 # Protein_GI_number: 15644401 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Thermotoga maritima # 1 429 1 433 434 412 50.0 1e-115 MRMYDIILKKRANLPLTDKEIRFVIDGYVKGEIPDYQVSALLMTIVFNGMNARELGTLTL AMAQSGNMVDLSNIDGITVDKHSTGGVGDKTTLIIAPLVAACGGKVAKMSGRGLGHTGGT IDKMESIPNLKVSLEKDAFINQVNQIGLAVIGQSEGLAPADKKLYALRDVTGTVDSIPLI ASSVMSKKLASGAQAILLDVKVGSGAFMKNIEDARELAKAMVDIGKKNGRSVKAILTDMD RPLGHAIGNALEIREVIDTLKGHGPEDLTHECIIMAAHMLVLSHICDYETALSRVQEALD SGAALERLRMMIDAQDGDSRVIDDESILAIGQFTYDVIAPQDGYIIHMNTEQCGIASVML GAGRTVKDGPIDYSAGIVMHKKTGDAVSMGERIATLYASDESLFTNAAQTYLAAITIGNT APKVVDTILDIVE >gi|292596533|gb|ADCV01000015.1| GENE 34 25412 - 25807 361 131 aa, chain + ## HITS:1 COG:BS_cdd KEGG:ns NR:ns ## COG: BS_cdd COG0295 # Protein_GI_number: 16079584 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Bacillus subtilis # 7 131 4 130 136 145 57.0 1e-35 MKEKDIQKLIDRAIVARDKTYSPYSHFGVGAALLCEDGTIYEGCNIENASYGLTNCAERT AIFKAVSEGQTKFKALAVVADTEGPCAPCGACRQVISEFEIPRIIMANLRGDYTVVELEG LLPFRFGPDNI >gi|292596533|gb|ADCV01000015.1| GENE 35 25847 - 26665 1172 272 aa, chain - ## HITS:1 COG:FN0658 KEGG:ns NR:ns ## COG: FN0658 COG1464 # Protein_GI_number: 19703993 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Fusobacterium nucleatum # 37 272 25 261 261 267 58.0 2e-71 MRKFLALAATVILGGALLIAGCGNDNKQAASDGKQVLKIGATAVPHAEILEQVKPILAKD GIELKITEFTDYNTPNLALGDKEIDANFFQHVPYMEEFAKAHKLDLVSAGGVHLEPMGLY SRKIKDLKDLPKGAKIAIPNDPTNGGRALLLLQKQGLITLKDSTNILSTVQDITANPNEY QFVELEAAQVPRSLDDVALAAINTNFALNAGLNPGKDALAIENNDSPYVNIVTVLKGNEN DPRIKKLMAALHSPEIIKFIQEKYQGAIVPAF >gi|292596533|gb|ADCV01000015.1| GENE 36 26808 - 27710 747 300 aa, chain - ## HITS:1 COG:BS_ywaB KEGG:ns NR:ns ## COG: BS_ywaB COG1575 # Protein_GI_number: 16080900 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Bacillus subtilis # 1 296 18 307 311 171 34.0 2e-42 MIQELIPLTRPRTLAAALGPTILGAAFSYYAFGAAQGTGLAILHTVLIFLAVVTAQIVAN LWNEYKDFKSGLDAGQKVGNAGSITRGVITPELIITMIKVLMFVPIIIGLYLSATITWYY IPAGFLCILISFLYSGGPKPISRTPFGEISSGIAMGFAIVLITGYAWTRELSLALLIPAI PSTLLVGSIMLTNNIRDIRNDESHGRHTLPIVLGRERALSLMSISYIFNFIWIIAWIIVG HMTWFALLAFLAAPLAFKTIHTLSTNTDEFQLDKAMGTTAGAAMIYQLMWAIGLIMGKLF >gi|292596533|gb|ADCV01000015.1| GENE 37 27646 - 27810 166 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVGPNAAANVRGLVRGINSCIMLKAHRVCTPFHFSYIYHLYMSIYVLYSRKVSL >gi|292596533|gb|ADCV01000015.1| GENE 38 27956 - 28900 773 314 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0412 NR:ns ## KEGG: Vpar_0412 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 312 1 313 314 201 37.0 3e-50 MRTLNKKLMTLACATCLTVGMGAVACADTVDLGYGMNVETRNGVKASVIDSVSTNPNLRT KEQNVMVNEVNALAAKRLGEHIKEVYHAEVPPFQGKVIDGYNLYQLSGDSALGHHTAWLV NYNVNKDIINYSGDVATQIVNSVMADKKAEKLPDAKPYSRSNAENFITSLKPISLDQKSL KPVMEKFNTRVNHDMNTQLNLMAIEGKKLSPKDQLATQEVVDVLKKIIPNFSVQAIDFSA RPYTSKFGVMQAMSIRGSLNYDGFMLPGSLGLYMLPQDEGLTIQLLVTEDTSHDYWTKQL ESMYSLKALKGGNK >gi|292596533|gb|ADCV01000015.1| GENE 39 28900 - 29697 892 265 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0413 NR:ns ## KEGG: Vpar_0413 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 265 1 259 259 360 77.0 3e-98 MKPLKTLVLATCLVGAVTSFASAKDVNTLAGTMSIPNNVTLATASNTNTLGIVKDIIAKE NAKPNTHQMTRQSNQQALAILDQMGISYDIYQLQGEDKTGQKDAFVVAVDVKQIAQQVAK EKANDPMFIAAMAALDKGQIDPVTEQLLLGTINKQIPTSTTVVPLNGPINVSSRDPQKAT IMPKTLKTLTVENAEQVHPVAGIKYQTYAASSRLLYVDGNVQTPLYANAAFVLKPGKPVL YVGITTDVQRDYFKPIFDNAFKSIK >gi|292596533|gb|ADCV01000015.1| GENE 40 29830 - 30201 662 123 aa, chain + ## HITS:1 COG:SP1567 KEGG:ns NR:ns ## COG: SP1567 COG0251 # Protein_GI_number: 15901410 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Streptococcus pneumoniae TIGR4 # 2 123 3 125 126 144 64.0 3e-35 MKTISTDKAPAAVGPYSQAKVVGGLLFASGQIPLNPATGTVVEGGIVEQTEQVCKNIEAV LTEAGTDFSKVVKTTCFLADIGDFKAFNEVYAKYFTSKPARSCVAVKDLPLGVIVEVEII AEV >gi|292596533|gb|ADCV01000015.1| GENE 41 30203 - 31450 1448 415 aa, chain + ## HITS:1 COG:FN1147 KEGG:ns NR:ns ## COG: FN1147 COG3681 # Protein_GI_number: 19704482 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 14 414 3 411 411 280 41.0 3e-75 MDYISLLQSEMRPAFGCTEPIALAYAAAKAVSVLDEFPNRIHARCSANIIKNVKSVVIPN SGGRKGLTAAATLGAIVGHPERELEVLESATDEDRKWLGTLLDANFCTVSLAEGVDNLYI EITAETDEHTAVVRIENDHTNVTYVSVDGEIISETVNEIKKAAKTEYAMTFDSIYEFALT GDISGILPQIKQQVEYNTAISKEGLSNDYGSNIGQLLLLDEENPSLETKCKARAAAGSDA RMSGCPLPVVICSGSGNQGLTVSVPIITTAEELGKSDDELYRALVFANLLTLYVKSGIGK LSAYCGVVSAGVVSVAGIAFLKGDSKDIIENTLVNGLASLSGIVCDGAKPSCAGKIAISL DGAFMGYKQARLNKNYQKGDGLVAYSVDETIRSIGAVAQGMKETDVVILNEMLKH >gi|292596533|gb|ADCV01000015.1| GENE 42 31564 - 32751 1399 395 aa, chain - ## HITS:1 COG:BS_yfnC KEGG:ns NR:ns ## COG: BS_yfnC COG0477 # Protein_GI_number: 16077799 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 5 392 20 403 409 138 28.0 2e-32 MKKYYPYLITVSHMINDSCQSVLPALLPLFIYTYGLSLEQAGFLILANTALSSLLQPLLG YVSDKINQPRLIALGVLLSACSTGAMGFVTSYESLLVCATLAGVGSSIFHPEGAKIMNRL GGGKKGKAMGTFAIGGSSGFAIGPLFAGSIAYTAGPHGLAAFTIVGLIISTVLFVLMPHI VTQARTIDQAIAMENPTLVAKPLKNYWKYFGILFIIILSQSVNFRVINAFIPIFWTRELG TSPEQGSFALTIFFSIGIFMTYIGGLLGDKYGPIKIIRLSLLIWLPAMFLLTEVPTFSPI IMMPIAYMLLLMIGAAKALSYSPVIVLGQTYLAKSIGFASGITLGVSQTIGGIIAPVVGN LADTYSLPAAMMTLVPFLVVGLGASLILKDPKKLQ >gi|292596533|gb|ADCV01000015.1| GENE 43 32854 - 33399 516 181 aa, chain - ## HITS:1 COG:BH0033 KEGG:ns NR:ns ## COG: BH0033 COG0590 # Protein_GI_number: 15612596 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Bacillus halodurans # 19 168 5 154 159 167 51.0 1e-41 MTKNITPIEIKNMDERSRDEYFMGFALEEAHKAYALGEIPIGAILVQNNTIISRHHNRRE LDHDATAHAEVLVIREACDVLKRWRLTGCTLYVTIEPCPMCAGAIINSRIDRVVYGASDY KGGAVESLFNVLSHPGLNHEPELASGVLGDECSQIMKDFFKERRKTRRSTQEAEGSALEM R >gi|292596533|gb|ADCV01000015.1| GENE 44 33483 - 34109 580 208 aa, chain + ## HITS:1 COG:SSO0012 KEGG:ns NR:ns ## COG: SSO0012 COG2860 # Protein_GI_number: 15896983 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Sulfolobus solfataricus # 1 206 1 199 205 116 36.0 3e-26 MDIIWYIFDMIGTIAFAISGALVGVARRMDIFGMAVLALATAIGGGIVRDVLLGYFPPNS LRNIVYVTVVISVTIIVFIIYNSRYRKHAMGPRSRASYLLADAVGLASFTVTGASAGFKL YPELPIFIVLLGTITAVGGGIIRDMLAQRIPSVLKEDVYALPSVIGGIVYYLMVISNWVG EAVYGAFTVVLVIRLLAIKYNWSLPKVR >gi|292596533|gb|ADCV01000015.1| GENE 45 34258 - 36072 2555 604 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0419 NR:ns ## KEGG: Vpar_0419 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 604 1 604 604 1105 100.0 0 MTNKWLKVALMVTAIATGTSIKIDAETVLYVPQDDRPVSLQYTVDTAREAGMTVLTPPQH LISGKTYQGQADQIMAWVEQNAGRADVMVLSTDTLIYGGLVDSRKHNIPLSTLQNRLKRI EGLKARNKNVRIYGFGTVMRSPRASGGGTEPAYYAEYGPTIFQIAALQDKLDSGSLTQEE TQKLMSLQASVPVEYLQDWFDRRQKNMKINKELIDETRSGVFDYFALGHDDTSQLSQSAL EGRYLNKYSKDISVEKYGSFPGADQLGLLLMARSRTDVSTEKPTFSVIYPLGGGGKTLPG YEDQTIDKTIAQHVEAVGGTMVTQGKPTVLLAVNTPLTTSTGESENFENFPMISNSTNAF VDRIQQAVDSGVNVSVADIAFNNGADNTLVSAMYKRDLLYKIGAYNGWNTASNTVGYAIA QGLLLKSMSPEGHRDMLTQQYLDNWAYQANIRKDIYRMQDSIRTDNVRYSGELNERLESY LGERIQDFAEKYLKINPRTVKATFPWGRLFETDITVYDKPVVPLEKELRLKREAEAKAKA EAEAKAKAEAAAKANGQAVPAQAAQPEKAATPQTPTSTPPVVKQPATESQGPRVVPTPAV APGQ >gi|292596533|gb|ADCV01000015.1| GENE 46 36083 - 37204 751 373 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0420 NR:ns ## KEGG: Vpar_0420 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 3 373 1 371 371 598 94.0 1e-170 MAMKKAFLPEITYMRGLCMLGVIGIHVGSYALQNPFVNLELISVLEILSRFGVPAFFFLS AFGLFYHTSVEGPFSYKEFMHRRIQVVLFPYITWSIFYLLYTGMTAHNLGNLHPGPLAIN LLFGTSMYHLYFMVILLWFYVMMPLWRAMVKVILKRPVFWLVLLFVIQVGIDYVSSYMLG RWVTENLSNQPVLKYLFDMRLNYWVIHYVWIFLLGAVCAERYEIVCEYMWRYRYLLGVSA VSSILLMLGSYYYVMDVWHYTVLEAIYTVHQMSPMGVLYTGLGTMFSLFLFQRLPMNVTM ESIWSEIGDKSYGIYLAHPFWLLIIFGVMAKYNLLYTVTNVLIMYGMALALSYLTTVGLN YVPKSIRKFILGH >gi|292596533|gb|ADCV01000015.1| GENE 47 37487 - 38344 1178 285 aa, chain + ## HITS:1 COG:SA1571 KEGG:ns NR:ns ## COG: SA1571 COG0115 # Protein_GI_number: 15927327 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Staphylococcus aureus N315 # 3 281 2 278 282 214 39.0 2e-55 MQELTYFNGEFVEPGAKVISIDDRGYLFGDSVYEVVRVVKGRCFALSYHQDRLYRSMREM DIPVKMTPDDLTELHEILIEQSEIKEGYIYLQISRGVAPRHHAYDRSKLEPQMLMSIRTL DLDEVNKLGEGVKAIALPDERWNHVDIKTTNLIPNILAQTKAEKKFAYTAILFRDGICTE GATSNVFAVKDGILYTHPADNHILKGITRQMILTRVAPSLGITIIEKEFDRTFVDEADEL FFTDTIGGVIPITKLDRNPVSGGKPGAITLRLREALEKLMEEGLP >gi|292596533|gb|ADCV01000015.1| GENE 48 38400 - 39446 1202 348 aa, chain + ## HITS:1 COG:YPO1073 KEGG:ns NR:ns ## COG: YPO1073 COG1135 # Protein_GI_number: 16121374 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Yersinia pestis # 1 344 1 343 343 369 53.0 1e-102 MIQLEHISKVYEGATRVEALKDISLNVKEGEIFGIIGQSGAGKSTLIRCINMLEAPTSGS VIVNGTDLTTLSKSDLRKARKDIGMIFQHFNLLSSRTVYDNVAFPLELQGMSKSEIKERI TPILDIVGLTDRMNNYPSQLSGGQKQRVGIARALASNPKVLLCDEATSALDPQTTDSILK LLKNINEKMGLTIVLITHEMHVIREICDRVAVIEGGVILEEGSTVEVFTHPRENTTKEFI SSVVSDNLPPEALEHLELHDQWIAGTAPLVRLKFTGQATDEPVVAGLVRRFNLDVSILFG GIDYIQNTSVGRLIVILNGDPENAQEGLDYIKTLPIESEVIGYVRANY >gi|292596533|gb|ADCV01000015.1| GENE 49 39427 - 40080 773 217 aa, chain + ## HITS:1 COG:VC0906 KEGG:ns NR:ns ## COG: VC0906 COG2011 # Protein_GI_number: 15640922 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Vibrio cholerae # 7 217 15 225 225 187 59.0 1e-47 MSEQIINLLITGTLDTLQMTIISTVMAMLLGIPLGVVLVVTSKGHILENVTLNKVLGAIV NATRSVPFIILMVAIIPFTRMVVGTSIGTTAACVPLTIAAIPFLARLVETSIKDINFGVI EAAQSMGASPLQIIWKVLLPEALPTIIDNVTVLIVNLIGYSAMAGAIGGGGLGDIAIRYG YQRFQADIMIATIIILIVLVQVVQMIGDAWSKAMNKK >gi|292596533|gb|ADCV01000015.1| GENE 50 40090 - 40386 463 98 aa, chain + ## HITS:1 COG:BS_yerC KEGG:ns NR:ns ## COG: BS_yerC COG4496 # Protein_GI_number: 16077726 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 5 95 4 94 104 114 63.0 4e-26 MSINEKLRSQQNDELFTAILTLENTEECYAFFEDICTINELKALSQRLQVAKMLRAGDSY EKIVEETGASTATISRVKRCLVYGADGYTLALDRLGAK >gi|292596533|gb|ADCV01000015.1| GENE 51 40452 - 41246 852 264 aa, chain + ## HITS:1 COG:BH2122 KEGG:ns NR:ns ## COG: BH2122 COG0730 # Protein_GI_number: 15614685 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 14 260 6 252 259 175 44.0 7e-44 MEWLITVTGLPFDILILVLLAVAGAFAGFVDSIVGGGGLISVPAMLLTNLPPSVALGSNK LSSIFGAGSASITFLRNHMVDFSLVRKLLPFTFVGSMLGTLAVVSLPPLYVKPIIIILLV CVTLFVVFKKDWGEINRTSQVAGKALYICMAFALGIGIYDGFIGPGTGTFLIMGFIFTGF DFLHASANAKILNFTSNLASLLVFLYLGHVNVKYGLATGAGQIIGAYLGSHLAIAKGSSL VRVVFLSVTTVMLLKLVYDYISTL >gi|292596533|gb|ADCV01000015.1| GENE 52 41258 - 42025 224 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 11 250 7 238 242 90 27 2e-17 MPHKSDVQVALISGGTSGIGFATAKLLLKEGWCVVINGRNEKVGQKVKTKLRRYSSKVQY IQGDVSKIEDCQRIVKETVDLFGGVSALVTAAGYYEEELLADVTEAAFDEMFGTNVKGTV FLCQAALPYLRSSKGSIVTIASDAGLQGNVACSVYGASKGAVVSFTKSLSLEMAPHSVRV NCVCPGDVDTSLVDKQIANAHQDAAAAKAEMGQHYPLGRIAKPHEIGEVIVFLLSNKASF VTGATWTIDGGLTSW >gi|292596533|gb|ADCV01000015.1| GENE 53 42152 - 43003 1164 283 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0427 NR:ns ## KEGG: Vpar_0427 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 283 1 283 283 464 98.0 1e-129 MAEYNGVTLEPLTDGSQDRDYQVEQFIFWGAGRAAALALSSKFSSVALCANATYMVTRIA HLYDVELQAGAVVGLVGGLSTAVGTAAVSLLIPIKAVRVPVAIGLTYAIGKIAHIWIQDG MPSDIERYKPMVAEFLENGKAIASEIVRDASASIPFTQGQRDVWAGIANETGLAKESLKQ VYEEKVTPAINKWNNETKYQIHDNAAEVVAKVSDAAKEKIDSAKEGIEVAKEFAKGGVEV AKASAQVAVETAKTKASDAVETAKDVATNTVNTAKEKIGGLRK >gi|292596533|gb|ADCV01000015.1| GENE 54 43026 - 43370 379 114 aa, chain + ## HITS:1 COG:AGc4850 KEGG:ns NR:ns ## COG: AGc4850 COG3339 # Protein_GI_number: 15889931 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 16 104 34 122 133 73 39.0 1e-13 MNPFNIIKYGKYFSESRFLGFLGRYGKKLAFVQQAVTLFLCFRDKDTPKYVKAVIAGALG YLVLPIDIVPDAIAVLGWVDDVAVLGLAFKIANRYIKTSHQEEAKKFFPFGSSR >gi|292596533|gb|ADCV01000015.1| GENE 55 43487 - 43906 351 139 aa, chain + ## HITS:1 COG:CAC0271 KEGG:ns NR:ns ## COG: CAC0271 COG0824 # Protein_GI_number: 15893563 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Clostridium acetobutylicum # 3 125 5 127 138 92 35.0 3e-19 MHIASVNVRFYETDMMGIAHHSNHFRWFEMARIEFLRKIGVTLWDMMNEDIVFPIMNVSC NYKEPANFDDELHIETYLVKMTRAQMVFRYRMRRASDGALLATGETKNAFMSKSTGKIVR LDDTFYLPMLAAVEEMPHE >gi|292596533|gb|ADCV01000015.1| GENE 56 43899 - 44702 919 267 aa, chain + ## HITS:1 COG:alr0094 KEGG:ns NR:ns ## COG: alr0094 COG0796 # Protein_GI_number: 17227590 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Nostoc sp. PCC 7120 # 5 228 20 242 292 183 42.0 4e-46 MSNVQQLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITYLACRI AETLEKQPVKLMVIACNTFTVVALDAVRELVSVPVIGVSQGVKTAINKSKSKTIGIMATV ATVNSHIHKHVALEVDHEVLVWEQPCPELAGLIEQGHLDDYFVREVCKDYLEPLLSREIE VVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLCF TKDVELGDALSASFLDTSRRTIEHITL >gi|292596533|gb|ADCV01000015.1| GENE 57 44715 - 45254 785 179 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0431 NR:ns ## KEGG: Vpar_0431 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 179 1 179 179 336 98.0 2e-91 MWFYNILSAVIAIIVAVAALYLLFRLFVLKQGNENIVLLAKRATNFQVSDRNFESITLFC DIPFVNKGRQLGTIMDLFPRPLLPEEHFDAIKVNAWAMDINRPRQDGYFEAIIIKPRKGG TIRVYVTLTGKTGNIREDIKGFPYMDIDIYYQIVGRTDYHIDKQRIRLTAEEVQAAMVQ >gi|292596533|gb|ADCV01000015.1| GENE 58 45267 - 45917 1011 216 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0432 NR:ns ## KEGG: Vpar_0432 # Name: not_defined # Def: protein of unknown function DUF129 # Organism: V.parvula # Pathway: not_defined # 1 216 1 216 216 434 99.0 1e-120 MAELELVCVPTRILTDNDDIVDAIVEFGGHNIGPEDIVCVAESVVAITQGRFTRPEELDV CWQARLINRFIHPDGSMASIYGMQSAMNLDGKWKVLGAFILGAIAKIFRKPGVFYAIARA ASLTDDVTGTMPPFDKHIVFGPKDPDKVAEKIVSRTGCYGAVVADVNDLKRSAILGTSRG IDAKKIAQLLIDNPFGNDSQMTPIVIIKNYASVSGK >gi|292596533|gb|ADCV01000015.1| GENE 59 46113 - 47825 2027 570 aa, chain + ## HITS:1 COG:MA2889 KEGG:ns NR:ns ## COG: MA2889 COG0145 # Protein_GI_number: 20091711 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-methylhydantoinase A/acetone carboxylase, beta subunit # Organism: Methanosarcina acetivorans str.C2A # 1 565 1 559 568 327 37.0 5e-89 MLLGLDVGGTFTDAVIIDGHRVVATAKRRTTKDNLMNGIGEALDAVLEGYDTSNIEQVTL STTVVTNTIVEEKEQVVDLYVVTGPGRNVDDIFPVKPIYLQGYTDHRGIVVEHTPADAVR GIANMVQARSGTDLAAVSAKFGVRNPQEELSITEELKNTYHVISNGSLLSGSLNFPRRTI SAYFNSAVTPVFTVFKKNVEDALSARNIVAPLHILKADGGSLPIEHMVSRPVETAFTGPA ATVLGLSALGVIGNQHTVALDIGGTTTDISLWKHGRPLMTKNGVSIREYPSAVRSFAVTS VGIGGESVVRFKNGNLTVGPERVGPSVALGGVEPTLGDALIVLGHANYGDFNLASRVLQD LADAIQAALQSNNINTSNNQLTLIKTASDVARLILQNALETIQRGVDEVITVENKRPIYV VADIVNPDIFVPEHIVVVGGTAPSLGVSIGEYMDLPITIPENAAVANAIGAALALSTIEL TVHVDTKRRLLVIPELGIKQQNCTLKRAEQVVERAKEALSEEALRLGLDTAQEIEVISIE DFPVVEGWQSMERLITVKVQLAAGVKHYVE >gi|292596533|gb|ADCV01000015.1| GENE 60 47815 - 49233 1397 472 aa, chain + ## HITS:1 COG:MA2888 KEGG:ns NR:ns ## COG: MA2888 COG0123 # Protein_GI_number: 20091710 # Func_class: B Chromatin structure and dynamics; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Deacetylases, including yeast histone deacetylase and acetoin utilization protein # Organism: Methanosarcina acetivorans str.C2A # 39 449 104 513 546 461 52.0 1e-129 MWNKGLSYRERHGILNMDTKQDEATSSTINKAKYHHSLGLVFFPAFDWKISETHPERQER LLYTRDQIVEEGLLDIPNIREYNPIVADWDTIERVHVGAPDLESWVTEAHRVSAGGAIAA ADAVIRGEVDRAFALVRPPGHHAMAMVHGIRGFCTINIEAVMIQHIRQTYGIKRVAVVDT DVHHGDGSQDVFYHDPDTLYISFHQDGRTLYPGTGFMDEFGGPQAIGGNIDIPLPPGTGD EGLMKVMRELVLPILEEFDPDIVINSAGQDNHFSDPLANMQVTAKGYAELVDLLQADIAV LEGGYSVQEALPYVNTGIILSMAGLDYSKVVEPAFDPVKYKQSQSVTNYIDELIAKWKVQ WANRYRIAEEERAGVGDIWSNRYNVYYDETGVQEERLERVRMYEDKVGWHSVLSRGQYGP YGPQSVYAMFIPWQADEGTRQDAIVEAKRAKAEGGASRYVVVDPLGDGQYEL >gi|292596533|gb|ADCV01000015.1| GENE 61 49397 - 50152 951 251 aa, chain + ## HITS:1 COG:BS_rph KEGG:ns NR:ns ## COG: BS_rph COG0689 # Protein_GI_number: 16079889 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Bacillus subtilis # 1 235 1 238 245 274 64.0 1e-73 MRSDNRTAGQLRPIKITRNFTEFAEGSVLIECGKTKVICTATVEDSVPRWLKGSGQGWVT AEYSLLPRSTQTRVSREAAKGKQTGRTIEIQRLIGRALRAVVDLEALGERSITIDCDVIQ ADGGTRTASITGAFVALVDAVDFTFGGTGKFPITDFCAAISVGIGPEGPITDLCYEEDSA AIVDMNVVRTGSGNMVEVQGTGEHGIFNRDELNALLDLAEAATDELMAKQREVLGATADK VGKEYPTAPEV >gi|292596533|gb|ADCV01000015.1| GENE 62 50154 - 50729 432 191 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 1 191 1 194 197 171 46 1e-41 MEQIVLATGNKGKIREFSEAFSHLSIDCVPVKAVISIEEPEETGTTFMENALLKARYYAK ATNRPCLADDSGITVDVLNGAPGVYSARYAGRHGDDNANNEKLIRELQGKSNRTGHYVCA LALVYPDGREVTAEGYCDGLVQDEPKGENGFGYDPYFYVPEFKKTMAELSIEEKETISHR GRALRELINKL >gi|292596533|gb|ADCV01000015.1| GENE 63 50796 - 51293 576 165 aa, chain + ## HITS:1 COG:MTH1774 KEGG:ns NR:ns ## COG: MTH1774 COG0622 # Protein_GI_number: 15679762 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Methanothermobacter thermautotrophicus # 4 159 3 158 172 68 32.0 4e-12 MKRIGILSDTHGYLEDIDLVLAATADQDIDMWLHAGDFGDDARYMQEHTDIPVYAVRGNN DRVQPLEPREQLIPLEDTYIYMTHGHEVSYYNRIQKLIELGTDMGARLIVSGHSHHHGEV RARDAVFVNPGSISLARDRSGGTFAIVTYDNGQFDVEFVYKQDIV >gi|292596533|gb|ADCV01000015.1| GENE 64 51371 - 52153 773 260 aa, chain + ## HITS:1 COG:CAC2601 KEGG:ns NR:ns ## COG: CAC2601 COG1586 # Protein_GI_number: 15895860 # Func_class: E Amino acid transport and metabolism # Function: S-adenosylmethionine decarboxylase # Organism: Clostridium acetobutylicum # 10 258 8 271 274 342 66.0 6e-94 MDTPVKAKPKMKLYGFNNLTKTLSFNIYDICYTRTEEEKKQYIQYIDEVYNADRLTAILT EVSHIIGANILNVAKQDYDPQGASVTILISEEEIEKEDVVMHLDKSHLTVHTYPESHPHK GISTFRADIEVSTCGQISPLNALNYLIQSFDSDILTLDYHVRGFTRDVSGKKIYIDHRIN SIQNYISAKTRNMYNMIDVNVYQENIFHTKMMLKEFDLDNYLFGITESELSDREIKQIKH QLKQEMMEIFYGRNLPSVKA >gi|292596533|gb|ADCV01000015.1| GENE 65 52442 - 53647 1773 401 aa, chain + ## HITS:1 COG:SA1524 KEGG:ns NR:ns ## COG: SA1524 COG0281 # Protein_GI_number: 15927279 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Staphylococcus aureus N315 # 1 396 1 400 409 372 48.0 1e-103 MDVRELAVQKKRELKGFLTVGTKYELKDAHDLSVAYTPGVAEPCLRIKDNEAESFELTCR SNMVAVVSDGTRVLGLGDIGAAAALPVMEGKSLLFKKFGDVDCIPLVVDTKDADTLINTV KLLQKNFAGINLEDISSPKCYEVENRLKAELEIPVFHDDQHGTAIACLAGVKGALRLVKK DLATAKIVVNGAGAAGANIARLLYLAGARDITLLVSSGVLHKDYKRLDSLQAELIDLLKL EEKHGDLAENAKGADILLGVSAAGAFTKEILESLADDAIVFAMANPNPEATYADMKAAGI RVAGTGRSDAPNQINNVAVFPGVFRGAIDVRASQITDEMKLAAADALAHLIPDSELNEEN VMPSVFDPRVAPAVAKAVAEVAVKQGIAKNPQAIEDGSYEG >gi|292596533|gb|ADCV01000015.1| GENE 66 54453 - 55943 559 496 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0440 NR:ns ## KEGG: Vpar_0440 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 496 1 496 496 959 95.0 0 MKPKLSGYTWKKGIFQSVWNEIANPLETEKSWTYGQLPEYIWLALILDKLGRIEGINQSV RILKYWKAINPKIEDCRFSTLLAESVENQQKLFNQIQLFVGDNTLEPLTLIFDIHDYPTF NGNFYNKMSIEKRLSKIEQIMQECMGSQTNMTTDIKYIVLFFRSICNKNNVMKWQEHIID DLNDYARLSHENEKMHTIRPLVRSMFGIFQSMDKSNLVYLNKFWEDLSCMSTCKLFSVNL SEVDEQNLNKDQCVEAFQNIFDYFISIKQDVLILDEKMTVLLGLAVFAYNRFYEVYKHDL DNSISGRSSVRGLFEILIIMKYLIHEANNHDNIWRDYQLYGLGKYKLVCEVNKDKINMPE GEGTHIPLKYLNILVEEFFRPEFLDINTNYFDDTNIRKKAEITGLADLYATYYEYLTSYE HGFWGSVRESSFVKCDNPAHQYHCIPSIEQHDNLTSVWNDCVLLMHHIVNVLNEEYGIPD KLLVEVNKFDPKSVNG >gi|292596533|gb|ADCV01000015.1| GENE 67 55918 - 57018 552 366 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0441 NR:ns ## KEGG: Vpar_0441 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 366 1 366 366 635 96.0 0 MIPNQLMDRLNQIQDEYKILLLKIEDSLTRNPDYVENILDSILIFWKKHETLVDIFLNYQ LESYSAYLYTAADYLDVDGLEHYPFLAQGKIHIMDDPLAKMCDTTLRLSSHEKINTQTMI EHVSFLISDNIKLLELEERPIWLLPVRENNRTEGSSEINSLAEQLFLSLFTDIESIEVYE KTCITIVDIKNHLRPESLDGILLFNEDVKEDTFEARMEGLISYSSKVPFLRHFCEVKDYK SVFLFSIIGYLIQAIDIFLLSEEYKIIPYIRSKSAFYYYSSLCYQHLENEISADKMLFKH AIYCHLIYLAFDRSIVEKISLKQYLDIISTLDINLDLIEMMDLKDIKKVVDNNLATLYSK INEEAN >gi|292596533|gb|ADCV01000015.1| GENE 68 57036 - 58247 414 403 aa, chain - ## HITS:1 COG:mlr0475 KEGG:ns NR:ns ## COG: mlr0475 COG0582 # Protein_GI_number: 13470699 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 39 399 35 385 399 125 26.0 2e-28 MSQKKNLRRSNGEGTFFQSQGKWRGQFSITKDNKLIRRAFSGNSKLEVYKLGKQWIEATQ QNTSIFSSKNTKLKDLCNYWLQDVKKVSVKPKTFQKYDSTLRLYILPLLGEIKITSITPQ QVQTVLNNWSNGTLKGKKGHIISSSTIRCTRRYLSELFEYAVNIGLLLKNPIKLTKPPRL ITTEIHTLSLDEIHQLTSIMKQQVSNNISSPYRINYYASYIAMKIALGTGMRLGEVFGLC WDCVDLIHGHISVRRTIQTGTKGQIFQDTKTKTSRRCIPISQELQSELTTYKEFQSNYAK ELGDKWTDSYGVVISGTFGKILSTSNFKSRYFIPILKQLNLEHITFHDLRHTHATLLLSQ KINPKIVQERLGHSTITLTLDTYSHLVPDIQKEAVKALDNLGI >gi|292596533|gb|ADCV01000015.1| GENE 69 58216 - 60801 1304 861 aa, chain - ## HITS:1 COG:alr8034_1 KEGG:ns NR:ns ## COG: alr8034_1 COG0507 # Protein_GI_number: 17227408 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Nostoc sp. PCC 7120 # 1 759 1 745 1022 155 22.0 3e-37 MVTTSNVSTIQAGQYYNKDDYYSRTITQEDFWFGKGLLSPIGDDIPNPYKSTITPLSQDN YEQKVNTLKEELTADAKKLAIDLTFSPPKSISIAMLNPALKYDLLDAHNQAVKNVLTFVE SNYVVWRKHTNKDNRTENIKTKNALFACLQHRVSREQDPQLHTHCLLFRKTMINGKIMTI EDRFIHSNQYLFSLMYDNELSKALQEKRIPLRESMSKDQKNIHFEIEGINDTLIEYFSKR KYQIQDYQANNGFSDTWDGAHAAGLASRRPKPPEDLITLEKEWRTSINSLGGFVINKSTQ NKDVSRPLKINDILKKSIDHLQEKSYAFSKSDLMIEVYKQGIMLGITVSEFENIFEHHLQ SALIQVGFRQLNNEIYYTTPKNLARAKYIDSLLLGPKIENYSTLDQNDANTKIDILSNNL KLSQGWELSKGQKEAINLMLSSSNKYIAVEGIAGSGKTTMLEQAKLLYESQGVNVIGMAF TGKAAEAMESEAAISSQTIHKYLNHLSPTTPHNSWDFSSVKKSEIPEVWIVDESSMLTDH LLSNILEASEKRNAKVVFLGDPNQLLPIGTGNAFARMTRKDNEQVPTVRMREINRQEEGS TLRKTVEALSGKFKNIEKKSPLSYIDDSIKEIPQRQYRLNSVIHEYCNYTAEQQDKSAIL VARNNDRNELNSEIHKRLVEKGTLKNENLLTSINQYGIESSKPYAIGEKVIFTKNDYKLK DTNGETIGIKNGQLGKIININGPKVTVQTNTNQNVIFDTREYKHFDYGYAMTTFKAQGIT VDNALIVHDSTQKNSNTRNKIYVDVSRAKKSVKIFTDDKEALGKQAKRFQQKITSSTFTP YIAKGKERKTIHVSKEKSKEI >gi|292596533|gb|ADCV01000015.1| GENE 70 60808 - 62724 971 638 aa, chain - ## HITS:1 COG:PSLT104_1 KEGG:ns NR:ns ## COG: PSLT104_1 COG3505 # Protein_GI_number: 17233468 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Salmonella typhimurium LT2 # 188 593 174 568 616 114 23.0 8e-25 MTNINNNIAFKELKRGKITFTIWKKYLRNILIGLFLLQAIASTGLFYGFLYQSENIISTQ NIYVTKEVALNYINPIKPDTYKTQIGQFIASHKFDFEVNPNNKIPFKNYKEVIDHLTNNQ LYILKENYQKYWLITLLLSLGISLYWNYSQYLKDTAVSKKALHKRGMQLLSQKQISLYTK NKPHVLSIGNINIPTDTECKHILVFGASGSGKSVLLSQFLNQINTYSQKYNDKRHYIITD VKPEFVGKFAKPDDYIFCPFDKRSISWSIFNDIDDISDYDTFASILFEQEGAKDPFWGLA AGAIFADGLKYLDLQGRKTNHDILDFFKQSTEYLTEAINSLPPTLITSKQYLNAPDNTFA SILATLASGLKPFMHLKDSTDNNAAFSFKQYIREEYQRTNGTIPNLYLLVPANRQRIMAP LLSLVMDIMINEALTLPESQNCRLYFIIDEIGSVNKIQLLPDLITKGRSYGISILALTQD PGLLREKYGPQVMQSFLNNFGTQIVLRINDAATAKELADNFGVEEIIEYKESIQLPQKGS PIPSITQDTTTKSLILPSQLQSLPPFKGYGKILGFNPFNLVIPQLFFSENPDIKHFDPID RKTINSFKPNMHPHRIKFNEYKEHRYGEDLINKYKKGE >gi|292596533|gb|ADCV01000015.1| GENE 71 62729 - 63025 343 98 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0445 NR:ns ## KEGG: Vpar_0445 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 98 1 98 98 158 95.0 7e-38 MANTDLNESIKIYCTSQLKRQIKNIAALENKSISSYITSLIDQHFQQNACIDSDFYNSLN ENLDRLEVLTLSLFKGLYELYRAEDKFEEICSTIYRKD >gi|292596533|gb|ADCV01000015.1| GENE 72 63344 - 63496 78 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTNPDYSQQKRKYFPIELPNGKIKYVRDRTSFREKHKLNTTLNLCSERR >gi|292596533|gb|ADCV01000015.1| GENE 73 63511 - 63690 196 59 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0446 NR:ns ## KEGG: Vpar_0446 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 59 1 59 59 103 98.0 2e-21 MKLYTVREAAEEYFAKNVSMSHIYNLIKTKNLNCIHIGHKILIPENALDEYCKANFNIQ >gi|292596533|gb|ADCV01000015.1| GENE 74 63888 - 64727 582 279 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0447 NR:ns ## KEGG: Vpar_0447 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 15 262 1 248 265 451 93.0 1e-125 MGFFDSLMNVHITDMSIKSEFSNRLEILIREFGLQKKQLAKELGVSAVAITKYAKGLSMP SFEIISAIADYFNVTVDFLLGRTAIPFLEKDFVYFCPIGKINYSFYIYNKEQEKEKLEGT LEYIFGLTVWNMELPKDEVALNQFLCFKFSKADSNQRLYEALFLTDELNVREFLFEMEKV LGFPFMNDYAGPMSIESQYLANLLIWNEDSIKPPLGSMPIKEPQYLATLSKPMSNEKVRL DYMSTSGAMPHMTTWLAMSEDERRDLLMRRLRRIKRNFK >gi|292596533|gb|ADCV01000015.1| GENE 75 64751 - 66691 1694 646 aa, chain + ## HITS:1 COG:STM0357 KEGG:ns NR:ns ## COG: STM0357 COG2189 # Protein_GI_number: 16763737 # Func_class: L Replication, recombination and repair # Function: Adenine specific DNA methylase Mod # Organism: Salmonella typhimurium LT2 # 1 646 1 652 652 331 33.0 3e-90 MIRDNIEANKFITPNSLDIELLKINFPYFFNDSGEFLLEQFKQQLKEQDITFNKEGYELN FLGKAYARYLSGAKTETFLAPHVEHNRLDENKNSENVYIIGDNLEALRHLLGSYIGKIKC IYIDPPYNTGEDFIYNDSFAFTADDLVERIGIDRQEAERILDLNGKSSHSAWLTFMYPRL VLARLLLREDGVIFISIDDNEYANLKQICDEIFGEENFQADVAVVANPGGRDYKNIAITN EHLLIYTKTIETELNELEKKGEFKKFDSKGGYELRELRNRNPKFTKRNRPNLYYPFFINP NSIQKDNTCLISLEANDEFSIEVYPKNSKGGDSCWRWGKDKSLENINSSSFDLSNLVARK KKNGGYNIYEKSRKATTKAKSLWNGVGYRTEDGTRSFNELFEESYFDHPKSPELIKQCLI IGMSEDDIVLDFFSGSATTAEAIMQLNASDLGNRKYILVQLPEPINEKELAYSAGYRTID EIGRERISRAAKKIDQEYGVDIDKGFKIYEIKPLSNNILDKLDRFDADSLILENMVKLFD TDCSRGKNAILMTYKIMDGYGFTSSIAPYQLKNYVADKIEDSLYIIEEGLTSEDVFELIK QLENGTLNINRLVLYSYSIEFSVLHELRRNISNLQNNKHVELIERY >gi|292596533|gb|ADCV01000015.1| GENE 76 66693 - 69650 1419 985 aa, chain + ## HITS:1 COG:STM0358 KEGG:ns NR:ns ## COG: STM0358 COG3587 # Protein_GI_number: 16763738 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Salmonella typhimurium LT2 # 1 981 2 984 990 513 33.0 1e-144 MEIKLTILPHQTKCIESIASVFDSVNMVESDESSANPIFSKDDITLKNNIEKIQSGLYES VIPVESRTSIENEFGVDVKMETGTGKTYCYTRLMYELNKLYGFFKFIILVPTTPIKEGTL NFIQSNYAMQHFSDLYPGRRIELSVLNAQKSNKGRKMFPQAVANFARSTVLEKNKISALL MTSGMLISKTTMDTDYDQTLLGHYSKPYDTLKATRPIVIIDEPHKFKRENTAYKRLIERI DPLCIIRFGATFPQKKGQQERDYNNLIFNLGACEAFNSNLVKGVETQLIEQESLNETRVK VLDIKHTNPKSCVIRNEKSGKSYTLALNDSLSTVSDDFHGVIIQSIGKTEEETIKKGITL SNGQILAKGDQIYAGVYSNTYQELMLKQAIQNHIEQERCNFLRETKIKTLSLFFIDSIES YRGEDGFGSLRCKFQELLKVALEEEYNKFKNSKNIIELDYSSFLLASLSNIEQTNGGYFA EDNSTSDVDIQKEIDQILRDKQSLLNFKDSSGQWNIRRFIFSKWTLREGWDNPNVFQICK LRSSGSEISKLQEVGRGLRLPVDEYGNRLSDEQFYLTYLCDYSEKGFAESLVNEINQDLL QKSTSIMELLLKVATDNGVTPDLLMGQLLTKGYINYKGDIIEDKREALLEEYPGFNSGLQ QGKVRNKNKKTKDMVNVRTNKFAEIKELWKCLNEKYYLVLDDISDDELYKAVLSILKSDI KEDMYAYTIRKSMIVDGSKAYVCDENPKSQKIEEKLPYGEFLKRVQQSTGLSTTIMHKAL CSYNMTVLLDDAFFNKKTLERFIRCFHIWFENTFVKRFSYKSLGVKKRETSLTDINGEVK GEIVQGVIGINKDTKMKVPDNFLYDQVVFDSPKEKENIQNSEINEVVVFGKIPRKSIQVP LYFGGTTSPDFMYVVKKGTGHEVNLIVETKDVDRSTTLRGIESLKIESAKKFFETLKNTG VNVVFKEQLKNDEIVPMIKALNSDL >gi|292596533|gb|ADCV01000015.1| GENE 77 70081 - 70234 85 51 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 3 51 2 50 157 79 77.0 2e-15 MNDVKSLSHSKWRCKYHIVFAPKYRRQIIYGRIKADVGKILRDLCKRKNVE Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:27:53 2011 Seq name: gi|292596532|gb|ADCV01000016.1| Veillonella sp. 3_1_44 cont1.16, whole genome shotgun sequence Length of sequence - 24295 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 6, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 138 112 ## COG1943 Transposase and inactivated derivatives + Term 253 - 292 7.4 + Prom 300 - 359 9.1 2 2 Op 1 . + CDS 607 - 8052 10096 ## COG5295 Autotransporter adhesin + Prom 8210 - 8269 6.6 3 2 Op 2 . + CDS 8345 - 10498 1429 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 10685 - 10726 7.0 + Prom 10505 - 10564 6.8 4 3 Op 1 . + CDS 10762 - 12066 1308 ## COG0422 Thiamine biosynthesis protein ThiC 5 3 Op 2 . + CDS 12090 - 12287 236 ## Vpar_0455 thiamine biosynthesis protein ThiS 6 3 Op 3 5/0.000 + CDS 12289 - 13059 900 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 7 3 Op 4 . + CDS 13069 - 14169 629 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 8 3 Op 5 3/0.000 + CDS 14182 - 14820 532 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 9 3 Op 6 . + CDS 14821 - 15339 361 ## COG0352 Thiamine monophosphate synthase + Term 15491 - 15524 4.0 10 4 Tu 1 . - CDS 15323 - 15556 108 ## - Prom 15779 - 15838 5.0 + Prom 15533 - 15592 8.8 11 5 Op 1 7/0.000 + CDS 15651 - 16418 787 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B + Prom 16426 - 16485 4.0 12 5 Op 2 1/0.000 + CDS 16547 - 17743 1490 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Term 17760 - 17805 7.2 13 5 Op 3 21/0.000 + CDS 17818 - 18561 925 ## COG2049 Allophanate hydrolase subunit 1 14 5 Op 4 . + CDS 18548 - 19570 891 ## COG1984 Allophanate hydrolase subunit 2 + Term 19609 - 19656 7.0 + Prom 19943 - 20002 9.1 15 6 Tu 1 . + CDS 20083 - 24295 4990 ## Vpar_0464 YadA domain protein Predicted protein(s) >gi|292596532|gb|ADCV01000016.1| GENE 1 1 - 138 112 45 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 1 45 109 153 157 64 64.0 4e-11 YYVDTVGRYEGAIKEYIRNQLQEDIAQDTLNFKEYTDPFTGEPVK >gi|292596532|gb|ADCV01000016.1| GENE 2 607 - 8052 10096 2481 aa, chain + ## HITS:1 COG:PM0714 KEGG:ns NR:ns ## COG: PM0714 COG5295 # Protein_GI_number: 15602579 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Pasteurella multocida # 1372 2341 1214 2247 2712 105 26.0 1e-21 MNKIFKVIWSKSKECYVVVSEIANNYSAKKAVLTSVFAVLAVTGSAAHVMGATLPSELTD KGSIKIGQYATTSNMSSIVIGTSSQFRTSSVDGYRAIGIGSGIIASGNNSVSIGGHSRAT EDQAIAIGGASDDSGAKATGSQSIAIGGNTVASGDSSIVVGGDDVEVAFARTVTYTDINT GQAKTGTLRQASIDLANIQLPQYITATASHAGTAIGMKTKAGDLGLSLGMGADSATRLDG KAGNVVNAIAIGAGAKANRDNSIAIGGGANTDAAGVAQTSYTLSNGDTVNWAGGENVLPG DVVSFGAPGYERQLKNVAPGIVSATSTDAVNGSQLYAIAEKTLSKYISIKSDLAGNKSNK GAEATDSMAIGPDASTTTAATKGTALGTGATVTVANGVAVGSQSKASTASGVAGYNVNDS RTDKYGSLSGKALTSTLGAFAVGNETNTRQITGVAAGTADTDAVNVAQLKSVNLKVAGDT GTGDVNLANSTLNIKGAGLAKTTASGKDVTVTVTEKAVKQEAVKAVTMAAADPNGPITVT PELTADKDTATYKVGIDPTKVAESTKLTYKDNDGADKTVTLKKGLNFKNGTMTTATTAAD GVVTVDINDDTKAKINNAATNKLDNLTSDGEQKVKSLSAWKVKANNSNAETVTGGDTVAF NDGSNIVITQNGKTFTVATKNDVNFNTVTATTKVTTPAVEGLTNTSWTPGTTTPVSGRAA TEDQLKAVDTQVATNKDAIAKNKDNIDKNKDNIAKNADNITKNATEIATNKGNIATNTAA LARKISLGGNTGSTTEKSLSTGDVKFNVKGAGLVTTSAAGDDVTVTVTEKAVKQEAVKAV TMAAADPNGSITVTPELSADKDTATYKVGINPTKVAETTNLTYKDNDGADKTVTLKKGLN FKNGTMTTATTATDGVVTVDINDDTKAKINNAATNKLDNLTPDGEQKVKSLSAWKVKANN SNAETVTGGDTVTFNDGSNIAITQNGKTFTVATKNDVNFNTVTATTKVTAPAVEGLTNTS WTPGTTTPVSGRAATEDQLKAVDTQVATNKDNIAKNKDNIDKNKDNIAKNADNITKNATE IAANKGNIATNTQNIATNTAALARKISLGGDTGNTTEKSLSTGDVKFNVKGAGLVTTSAA GDDVTVTVTEKAVKQEAVKAVTMAAADPNGPITVTPELSADKDTATYKIGIDPTKVAEST ILTYKDNDGADKTVTLKKGLNFKNGTMTTATTAVDGVVTVDINDDTKAKINNAATNKLDN LTPEGEQKVKTLATWNVATAADGGTHSGDSTSTVTGSDTVTFKAGNNLNVNQTGRDITFS LNKEISDMTSLGLTNPDGAKATIKTGKGDAHVGKTDQADRIVYTNAAGTEEQVATLKDGL QFGGDNNPEVINKTLNQKLEVVGGADAAKLSDNNIGVNAKDGKLHVQLSKELNDLTSAQF KNGNAVSTISGAGTTVTDGTNTTQYGPKGMTINSGANEISLTDKGLNNGGKVISNVASGG DVDTNAANIGDVKKATAASKTTVSVNKKDTETPNLVLEETVDPADGHTNYDIKLANKVNL GNDNVVLDGADGTVKAKGNITSEGTVEGKDLKAGDVTVNKDNKGTVNGLSNKTWTRGQAP VSGQAATEDQIQAVDTRVMAVEDKVADFGWMAKSSATGTGQATGNNTATKVGDKTEVEFR AGDNLTINQTGTTFTYSLNKNMTGLESVSVGDVANDKPGVVLNGAEGTMGVRGKDGANAS ITAAKGADGLTGNGAGKDRIVYEMKDANGNSVKETVATMNDGLHFAGDNGNTVIDKTLNE KLEIVGGADATKLSEKNIGVNAKDGKLHVQLAKELNDLTSAQFKNGNAVSTISGEGTTVT DGTNTTQYGPKGMTINPGANEISLTDEGLNNGGKVISNVASGGDVDTNAANIGDVKKAAA ASKTTVSVNKKDTETPNLVMETSVDPADGHTNYDIKLADTVNLGNGNIVLNGTDGSIKTK GNITSEGTVEGKDLKAGDVTVNKDNKGTVNGLSNKTWTRGQAPVSGQAATEDQIQAVDTR VMAVEDKVADFGWLAKSSATGTGQATGNNTATKVGDKTEVEFRAGDNLTINQTGTTFTYS LNKNMTGLESVSVGDVANDKPGVVLNGADGTMGVRGKDGANASITAAKGADGLTGTGTGK DRIVYETKDANGNPVKETVATMNDGLHFAGDNGNTVIDKTLNQKLEIVGGADAAKLTDNN IGVNAKDGKLQVQLAKDLNGLSSVEVKDDNGASTVMKGDTIKSKDAAGNTSVVNGSGVTI TPANPQNSNAGTVSLTTEGLNNGNNQIKGVAAGTADTDAVNLGQLKKSNAQLANAIANVE SETQRVGAHAAAMSALKPIQYDPLEPTQVMAGYGNYRGKSAAALGLAHYTDEDTMFNVGV SVGGRHNMINAGYTHKFGNSDAKKAVPERYKGGPISSIYVMQDEMTSLKQENSRQKEVLD KQQAEIESLKAMVNSLLATKG >gi|292596532|gb|ADCV01000016.1| GENE 3 8345 - 10498 1429 717 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 65 703 156 812 815 555 44 1e-157 MNNNFNNFGNEFSSMNDLFNQLMGNMGGYSTERRSYKINGREVTPEEFAFYRQTGRLPSN EEMQAAQAAQQGKIKQDGILARLGTNLTQQARDGKLDPVIGRNKEIQETAEILARRTKNN PVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEAGTQYRGSFEENIQN LIKEVKAAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGEMTVIGATTQDEY RNTIMKNAALARRFNEVKVNAPSAEDTFKILQGIRPLYEAHHNIELPDAVLKAAVDYSVQ YIPQRSLPDKAIDLIDVTAAHLASQHPVTDIKTLEADIADAKAKQEEYAQKEDYESAINE KMRIQKLQAELDNHTENQKVVAKVNDVAEAVERMTGIPVSQMGASDIERLKDMKSRLEAH VIGQDKAVEAVSKAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGNKDAI IRLDMSEYSDRTAVSKLIGATAGYVGYEDNSNTLTERVRRNPYSIVLFDEIEKADPQVIT LLLQVLDDGRLTDGQGNTVNFKNTVIIATSNAGFGYGSDNDDENKVDVMERIAPFFRPEF LNRFNAVIEFNQLSKEDLKKIVDLMLDQVNKTLAKKDITLDVTDAAKELLMEQGYDKTMG ARPLRRVIESEIRDNVTDFYLDHIDAKHLLADVKDGHIVISEKADSDDSKDQDKAEK >gi|292596532|gb|ADCV01000016.1| GENE 4 10762 - 12066 1308 434 aa, chain + ## HITS:1 COG:CAC3014 KEGG:ns NR:ns ## COG: CAC3014 COG0422 # Protein_GI_number: 15896266 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Clostridium acetobutylicum # 2 434 3 433 436 509 57.0 1e-144 MFMTQLESAVAGVVTKEMKVVAEKERMDEDVLRSLVAAGKVVIPCNKQHTSISPEGIGKR LRTKVNVNLGTSKDVTDYDSEIEKVNRAIRLGAESIMDLSTHGDTRIFRRKLIETSPVMI GTVPIYDSVIHHQKDLGELTAQDFLDTIRLHAQDGVDFITIHSGITRKTIDQIKNHKRLL NIVSRGGSLVFAWMSMTGHENPFYEYFDEILKICKEYDVTLSLGDACRPGCLADATDVCQ IEELVRLGELAKRAKQYGVQAMIEGPGHVPLHQIQMNMEVQESLCDGAPFYVLGPLVTDI APGYDHITAAIGGAVAGMHGASFLCYVTPAEHLALPNADDVKDGIMAFKIAAHAADIARG IPNARDIDDTMAKARQVLDWEAQYACALDPERARSIRESRAPEEDHSETCSMCGKFCAVR SMNKALQEEYIDIL >gi|292596532|gb|ADCV01000016.1| GENE 5 12090 - 12287 236 65 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0455 NR:ns ## KEGG: Vpar_0455 # Name: not_defined # Def: thiamine biosynthesis protein ThiS # Organism: V.parvula # Pathway: not_defined # 1 65 1 65 65 116 100.0 3e-25 MDLIVNGEPKQVSNEQLHLVLNELGYTGKHFVVELNGEILSKETYTTTKLTAADRLEIVS FVGGG >gi|292596532|gb|ADCV01000016.1| GENE 6 12289 - 13059 900 256 aa, chain + ## HITS:1 COG:CAC2922 KEGG:ns NR:ns ## COG: CAC2922 COG2022 # Protein_GI_number: 15896175 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Clostridium acetobutylicum # 2 255 1 255 255 298 62.0 6e-81 MLDSFAVGNTTFSSRLLVGTGKYASYNLMHDALVASQSDIVTVALRRVGTTQSEEDILNY IPGTMHLLPNTSGARNADEAIRIARMAKALGCGDLIKIEVIQDQMYLMPDNLETIKATEV LAKEGFIVFPYMSPNLMDAKRLVDAGASCVMPLASPIGSNRGLEAKGLIEILINSIDVPI IVDAGIGRPSDATIAMEMGASAVLVNTAIATSSDPVGMAEAFYHAVEAGRKAYLAKCAPK KSVGSASSPLTGFLRK >gi|292596532|gb|ADCV01000016.1| GENE 7 13069 - 14169 629 366 aa, chain + ## HITS:1 COG:CAC2921 KEGG:ns NR:ns ## COG: CAC2921 COG1060 # Protein_GI_number: 15896174 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 1 364 1 365 368 323 45.0 4e-88 MSFIDVLSSVYDEDIAETLEAITDDEILSTLSKSVLTIEDALILLSPQALLYLEDMAQIA HKRTVQQFGYTIQLFTPMYISNYCDNGCVYCGYSHHSGIAREKLSLEDIELEAKAIAETG LEQVLVLTGESKSCSPPSYIQAAVEKLVPIFSSVSVEVYSLTLEEYKGLVTVGADGMTMF QETYNPTLYAQLHPFGPKSDFAKRIDTPELACQAGFRVVNIGALMGLDEWRREAYKTMLH LNYLMQHYPDVELSVSVPRIRPCAVGYSPKYPVDDTALVQYILALRLLFPRVGITLSSRE SKYMRDNLVRLGITKLSAGVTTSVGGHTKQDDSSQFTISDNRSVSEMAAMLENNGYQPIY KDWQAL >gi|292596532|gb|ADCV01000016.1| GENE 8 14182 - 14820 532 212 aa, chain + ## HITS:1 COG:Cj1046c KEGG:ns NR:ns ## COG: Cj1046c COG0476 # Protein_GI_number: 15792373 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Campylobacter jejuni # 23 205 81 266 267 135 41.0 8e-32 MAHMNNEFETAISHFYSSEEFRKLQSSVVGVLGAGGLGSNCAVNLVRSGIRNLIIADYDI VELSNLNRQYYFSSHVGQYKVEALQDVLTAINSNVIVTVYKDKLTIENIPEIYKKADILI EAFDTVEAKSMFLEATISVYIPKIMVSGLAGIGNSDALRTKKLGKNLYIVGDEHSGVDNA YPYAPRVAIAAAKQADLALSLLLEKTMSNEVK >gi|292596532|gb|ADCV01000016.1| GENE 9 14821 - 15339 361 172 aa, chain + ## HITS:1 COG:sll0635 KEGG:ns NR:ns ## COG: sll0635 COG0352 # Protein_GI_number: 16329575 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Synechocystis # 6 171 135 298 343 137 41.0 1e-32 MNRKDKLTEVMNACPIYGITGGTRDVVPLVKDMLSAGIRIIQYREKGKTPILRYQEAMIL RRLTSNYHALLIIDDYVDLALAVHADGVHIGQADLPPNTVRRIVGPNMLIGWSTHSISDL KVANRYTGVIDYIGVGPIFSTQTKPNANPVGISYVYWAKQFSKFPIVAIGGD >gi|292596532|gb|ADCV01000016.1| GENE 10 15323 - 15556 108 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIFIMYTKFFYNQKNHKILILWFVCKLNFLSDSTISSHKLINRILYIVRLCYFRNGTNKI GMRLPNDISICRFNPPQ >gi|292596532|gb|ADCV01000016.1| GENE 11 15651 - 16418 787 255 aa, chain + ## HITS:1 COG:FN0439 KEGG:ns NR:ns ## COG: FN0439 COG1540 # Protein_GI_number: 19703777 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Fusobacterium nucleatum # 1 252 1 252 257 321 60.0 8e-88 MSHYVDLNSDLGESFGNYTLGMDSEVLNHVTSANIACGWHAGDPLIMDATVRICKEKGVA VGAHPGYPDLMGFGRRAMAVSPAEAKAYMMYQLGALQAFCDSYDITLQHMKLHGAFYNTA CVTPVLADAILDGLQAVNPNIAAMVLSGSYIAQEAQRRGIPVIQEVFADRGYTEEGTLVP RTEVGAFIKDPQEALDRVLMMVTKGKVVTNTGKTIDIVADSICVHGDNPEAIAFTKYIWE ELSKAGITVANFQNR >gi|292596532|gb|ADCV01000016.1| GENE 12 16547 - 17743 1490 398 aa, chain + ## HITS:1 COG:FN0438 KEGG:ns NR:ns ## COG: FN0438 COG1914 # Protein_GI_number: 19703776 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Fusobacterium nucleatum # 7 398 4 395 395 405 61.0 1e-113 MKPITGKASFSVLLGAAFLMATSSIGPGFMLQTAAFTNELKADFAFAIVISVIFSIIAQL NVWTIIGVSQMRGQDIANKVLPGLGYIVAFLISLGGLAFNIGNIGGASMGLNIIFGIDTT TAAAISGILGILLFTSKKMGGVLDNTAKVLGTVMLVLIAYVAFSTNPPVGTAVTHAIVPT NYPWLATITLIGGTVGGYITFSGGHRLIDAGITGQEHLKDVRRAAIMGMSVDALVRILLF LAVLGVVSMGFVLDAKDPAGSAFLLGAGEIGHKLFGIVFFCAALTSVVGAAYTSVSFLKT LFKVVERNEKLTIMAFIFISTCILIFIGKPASLLILAGSVNGLILPVTLAVMLVATHKSE IVGTYKHNKLLYYTGWIVVLVTSYIGVTSLKGIAKLLG >gi|292596532|gb|ADCV01000016.1| GENE 13 17818 - 18561 925 247 aa, chain + ## HITS:1 COG:FN0437 KEGG:ns NR:ns ## COG: FN0437 COG2049 # Protein_GI_number: 19703775 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 1 # Organism: Fusobacterium nucleatum # 9 243 24 260 262 253 53.0 3e-67 MKPTISPVGDCAISIDFGQAIDPKINRQIRQVIEQIKLLQLDGIIELVPTYCALLVQYDA MVYTYSDICGTLNPILQESVTDSGNERVTIVEIPTIYGGEYGPDLGFVASHNHISEAEVV SIHSGTDYLVYMLGFIPGFTYLGGMDPRIATPRLSSPRTLIPAGSVGIAGEQTGTYPSDS PGGWQIIGRTPLTMYDMSKKQAALLRAGDYVRYVPIDENEFHRIKSLGMEYIPSIYEIES GDLRGYK >gi|292596532|gb|ADCV01000016.1| GENE 14 18548 - 19570 891 340 aa, chain + ## HITS:1 COG:FN0436 KEGG:ns NR:ns ## COG: FN0436 COG1984 # Protein_GI_number: 19703774 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Fusobacterium nucleatum # 11 322 4 305 336 263 46.0 5e-70 MDINEFQRALIRVDAPGMYTTIQDLGRIGFQQYGMPVAGPMDSESYLLGQALVGNKEPLG ALECTVLPPTLTVQGTCIVAFTGADMHPTINNLVVPRYIPFICHEGDIISGGFSQCGVRM YIAFSGGIDVPAINGSVSTHTKAKIGGFEGRSLQAGDQFGIKAFTRDEVNVCDFYGGHNL FNTALYNRGGRECHEPLRVVLGNQAKYFTEKGIRTFGSKIYTLTVQCDRMGFRLDGPVIE HIDGADIISDGAVFGSIQVPSDGNPIVLMADRQTTGGYTKIGTVITADLPRLSQLPVGDG IHFDIVSVEEAQAIYRTYMKRLHKRIQLAHEQSVYAFNVT >gi|292596532|gb|ADCV01000016.1| GENE 15 20083 - 24295 4990 1404 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0464 NR:ns ## KEGG: Vpar_0464 # Name: not_defined # Def: YadA domain protein # Organism: V.parvula # Pathway: not_defined # 1 1404 1 1446 2235 1656 87.0 0 MNKIFKVVWSKSKNCYVVVSEFAKNNSGKKKIVVATIFAALAMSNASISMASNDVPSNLP ATAVGLGPNASVKGDKAVGFGYNAAAAGGNSVVIGSNSSVAAGSPQGIAIGGGNTANEGA RVIGEQAIAIGGNTLAKGHSSIVIGGDDVVKADGVKVIYTTSGGATQIGDLRSAVQSLTG FDMRTPMFTMATAGESGITLGMKGQSGNVGIAIGTGANAKDRLSGTSSGASGQANNDVTN AIAIGTGARANRDNAIAIGGGSNTDVGGTKQSSYTLPNNVVASWAGGDKTLPGDVVSFGS KGYERQLKHVAPGEVSATSTDAINGSQLSAIVDQIAYKYISIKSSDVANKDNTGATADNS IAIGPNAATDASASRSVAVGDGARGKVVDGVAVGSKSIADIASGVAGYNVNASRTDIYAG LSGAALTSKLGGVAVGTINQTRQINYVAAGTADTDAVNVAQLKSVNLAFTGDTGTGDVNL ANSKLAVNGDNTYISTTANGKKITVSGKKQDITVANGSATASAGMADSANVANAINQAID QNKYGWNLSANGEATPVAVEKGNTVDFSGDDNVAVARNDKKISVALKKDLSKLNSASFNN AGGNETVKIDGDKGINAGNLKVANVADGVADKDAVNVSQLKKVDDKAEANKIAIDTNKTA IAKNAGDIATNKTDIAANKDSIAANTQKIADNKTAIDKNAGEIATNKGDIVSNKANIAQN TAAIGRKISLGGNSGSTDEKSLSTGDVKFNVKGENGLTTVANGDDVTVKLDDATKGKVDN VADRDLSNLTPDGKQQVKDLAAWNVVANNETAEKVEGGNTVKFIDGDNISITQNGKDFTV STKKDVTFGTVTATQTITAPKVKATTGVETPQVTGLTNTAWTPGQTQPVSGRAATEDQLK HVDDQVAENKANIADNTDKIGKNADAIADNKQKIADNKTAITKNTDNIATNRQNIADNKA AITKNASDIVTNKDNIATNKANIDKNTTAIGRKISLGGNSGSTDEKSLSTGDVKFNVKGE NGLTTVANGDDVTVKLDDTTKGKIDNAADRDLSNLTPDGKQQVKDLAAWNVVANNETAEK VEGGNTVKFIDGDNISITQNGKDFTISTKKDVTFDTVTATQTITAPKVKATTGVETPQVT GLTNTAWVPGQTQPVSGRAATEDQLKHVDDQVAENKANITDNTDKIGKNADAIADNKQKI ADNKTAIDKNAVDIATNKDNIAANKTDIATNKDNIADNKQKIADNKTAIDKNTGDIATNK ADISTNKDNIAINKANIDKNTTAIGRKISLGGNSGSTDEKSLSTGDVKFNVKGENGLTTV ANGDDVTVKLDDATKGKVDNAADRDLSNLTPDGKQQVKDLAAWNVVANNEMAEKVEGGNT VKFIDGDNISITQNGKDFTISTKK Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:28:22 2011 Seq name: gi|292596531|gb|ADCV01000017.1| Veillonella sp. 3_1_44 cont1.17, whole genome shotgun sequence Length of sequence - 13552 bp Number of predicted genes - 10, with homology - 9 Number of transcription units - 9, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2740 - 2799 5.0 2 2 Tu 1 . + CDS 2856 - 4265 984 ## COG0534 Na+-driven multidrug efflux pump + Term 4458 - 4502 10.3 - Term 3946 - 3987 -0.3 3 3 Tu 1 . - CDS 4231 - 4311 59 ## - Prom 4517 - 4576 8.8 4 4 Tu 1 . + CDS 4818 - 5855 1446 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 6013 - 6046 -0.9 + Prom 5909 - 5968 5.0 5 5 Op 1 . + CDS 6082 - 7203 1062 ## COG0628 Predicted permease + Prom 7221 - 7280 2.9 6 5 Op 2 . + CDS 7331 - 7987 867 ## Vpar_0469 propeptide PepSY amd peptidase M4 + Term 8015 - 8052 8.2 - Term 8003 - 8039 4.2 7 6 Tu 1 . - CDS 8177 - 9694 552 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 9735 - 9794 7.7 - Term 9897 - 9930 2.1 8 7 Tu 1 . - CDS 9941 - 11161 1223 ## COG3633 Na+/serine symporter - Prom 11381 - 11440 13.3 + Prom 11405 - 11464 8.3 9 8 Tu 1 . + CDS 11508 - 12254 376 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 + Term 12324 - 12367 -0.5 - Term 12158 - 12198 7.3 10 9 Tu 1 . - CDS 12235 - 12966 793 ## COG2968 Uncharacterized conserved protein - Prom 13051 - 13110 5.4 Predicted protein(s) >gi|292596531|gb|ADCV01000017.1| GENE 1 3 - 2600 3254 865 aa, chain + ## HITS:1 COG:FN0735 KEGG:ns NR:ns ## COG: FN0735 COG5295 # Protein_GI_number: 19704070 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Fusobacterium nucleatum # 539 864 277 617 617 78 29.0 5e-14 MAEKVEGGNTVKFIDGDNISITQNGKDFTISTKKDVTFDTVTATQTITAPKVKATTGVET PQVTGLTNTAWVPGQTQPVSGRAATEDQLKHVDDQVSENKAKIADNTDKIGKNAEAIADN KQKIADNKAAIDKNAVDIATNKDNIATNKADIATNKDNIATNKADIATNKDNITTNKQNI ADNKAAITKNAGDIAANKANIDKNTEAIGRKISLGGNTGSTDEKSLSTGDVKFNIKGQNG IVTEANGDDVTVKLDDATANKINNAANTDLSNLTDAGKQQVKDLSAWNVVANGNTAEKVE GGNTVKFIDGDNISITQNGKDFTIATKQDVTFNTVKANQTITAPKVKATEGVETPQVTGL TNTAWTPGQTQPVSGRAATEDQLKHVDDQVAENKANIADNTDKIGKNADAIADNKQKIAN NKAAIDRNAADIATNKDNIAANKQNIADNKAAITKNTSDIATNKDNIATNKANIDKNTTA IARKISLGGNSGLTDEKSLSTGDVKFNIKGENGLTTIANGEDVTVKIDDQTKAKIDNAAN QDLSNLTETGKQQVKDISAWKVTAAGGTVEKVQGSDTVKFQAGDNLVVNQDRTTFTYGLA KDLKGLNSVTVGDENGVSTKITPAGTTVKDAAGNSTTINGGGMTITPADTAASPVSLTVD GLNNGGNKIHGVAPGTADTDAVNVSQLKASNAGLQEAVNRVGTETQRVGAHAAAMAALKP IQYDPLEPTQIMAGIGNYRGETAGAIGIAHYRTEDTMFNVGVSLGTSHNMVNAGITHKFG GSRERKDAIPERYKAGPISSVYVMQDEVSSLKKENSNQKTVIANQAARLNTLEAENERQR QELAETKQGLDDLRAVVNQLLASKG >gi|292596531|gb|ADCV01000017.1| GENE 2 2856 - 4265 984 469 aa, chain + ## HITS:1 COG:PH1807 KEGG:ns NR:ns ## COG: PH1807 COG0534 # Protein_GI_number: 14591560 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Pyrococcus horikoshii # 36 465 10 459 463 156 26.0 9e-38 MLDRIQRWLSIDTMLPVVERLGPVGTTKQLYGNYLKIAWPATLQGLMLQFMTAIDLAMVG ALGASALASVGIMGQPEMVMLIFCRALSIAVTAIIARRHGEGDVDGMNAVLKQSILLNFL IYVPLLLICFLNLEHILRFTGAEDGYIETAVWYGRFIVISLIFQSFSQIVGAALIGYGNT KVIFKSNVVGNILNTIMNFFLIYGIGFFPELGVMGAGVSTMISSAIIALLLLRTISQHTS TGLTLRHPSKWTFERPVLHTMFHVGGSSLGEQFFERFGMYTYTMIVASLGAVPLAAHYVC MNLMDIFYYFAMGLGFAGASHTGQSLGHKRPDIARTYGKIGARIGLVVGLVSALIFMGPG DFLVQLYTRESDVVTLSATLMGIMAIAAFPQALQQVYSGVLKGAGDTYYIMKYSLVSVAI IRPIITYLLCITLGLGLFGAWLSLCFDQSLRLCCSYLRFIRGTWQHKVV >gi|292596531|gb|ADCV01000017.1| GENE 3 4231 - 4311 59 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNPSKTFNVKKNLHLIKQPYVAMFLE >gi|292596531|gb|ADCV01000017.1| GENE 4 4818 - 5855 1446 345 aa, chain + ## HITS:1 COG:VC2213 KEGG:ns NR:ns ## COG: VC2213 COG2885 # Protein_GI_number: 15642211 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Vibrio cholerae # 116 343 95 312 321 78 29.0 2e-14 MNKKLLALLAVAAVGVSVAGATPQTQFNKGEFQVDLGASDSKAKTKAWTSDAKWNFDGGV TYAFTDKTALQYQYHGLNDKMFGTSYSDRMQEVNLIQSLNKNFAVYGGYAHISGDTFPKA NNIAQLGVIGKANLGSKVDVYGKAGVGTKRTTTWEAGLGYKVNQDWDINAGYRYINTKRD DKSNISFQGPVVGLSYRFGGHKSVAPVYTPAPAPVYTPAPAPTVEAPAYKTPKLDYYVQS IYFDSDQDVARADQYPNLTAAVNAANQYSQDQVKLMGNADTDANPQYNIALSERRVQHVA QYLVNHGVSADRLIGIANGDVKPVATNSTAAGKAENRRVDVYIHR >gi|292596531|gb|ADCV01000017.1| GENE 5 6082 - 7203 1062 373 aa, chain + ## HITS:1 COG:SPy1117 KEGG:ns NR:ns ## COG: SPy1117 COG0628 # Protein_GI_number: 15675097 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 37 368 42 375 382 152 30.0 8e-37 MKEFKYYKQLIGAIILAGIMIMMALRISDIASGLDAIFTAFVPLIVGACIAFVLDILVVR YERWLWPKCDSGWKYKIRRPLSLLLSFVTISVIVYFIARMALPQLIHSMSIIVAASPQLY TDFQTWMQHITETIPMASNQTIIDALSGENIAKYTREWGTKGGTYIVNAMGTVLSWTLNI GLGLIFAVYMLLDKERLMLQGKRILKAYASDEWVNRVSYVTRVAVQTFSNFFVGQFIDAL VLGVMVGITLWLFNIEYATTIACVIGLTGLIPLLGIYVGGIIGAVMLLTVGPMDALIYVI ILEVLHQIESNFIYPKIVGNSVGLPGLWVFAAVIVGGSLMGVTGMLIGVPLVATCYKLIM TDVDGRLASNEGL >gi|292596531|gb|ADCV01000017.1| GENE 6 7331 - 7987 867 218 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0469 NR:ns ## KEGG: Vpar_0469 # Name: not_defined # Def: propeptide PepSY amd peptidase M4 # Organism: V.parvula # Pathway: not_defined # 1 218 1 218 218 408 99.0 1e-113 MNKKLISMALTGVLAVGMLSVATPSVADARKTKPETSTDISVKRAPGESIVMTMSQIGTI FQNRYPNAALHSVELNSNDLNYGYKVVGYSKYHQYKMKIDVITGNASDMEEGGKPKKVIG EIFNKDKVIESTQAERVAKQQLGNDAVMKGWKIEAHNGKVLYYVTMHQDGKKVVVTVDAE TGAYVEQSKSYKLPPEPDQGFDGRKTNLVWGSDIDMGR >gi|292596531|gb|ADCV01000017.1| GENE 7 8177 - 9694 552 505 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 1 427 1 407 458 217 33 4e-56 MKQYDIIVVGTGGATIVADAALKKGFKVAIIEKGKFGGTCLTRGCIPTKVMVTAANAIQE TKEFKKIGVNVGPATMDWHTVSKRTWHKIDESAGIYDYYNAYDNVDVYRGAASFVSDKVM NIHLNDGSGIVEITAPTIILGTGGYSNVPNVPGLQESGFLTSESLFGDKFPKQPYKSLAV LGAGPIGVEFAHVFDSAGTEVTILQHNVRLVPKEDADISEHLLNNYRERGINVLLNQDTV EIRQEDGLKVVVTKDRTTGEITETKVEEILVAAGIRPAVEELHLENTGIETRPKGWIKTN EFLETSVDGIYALGDVNGEPAFRHRANYEADIIAHNLFYATSEDDYRWARYDTLPKVTFS YPEIGSVGLTEAEAIKAGYNVGVGKNFYSSTAKGYAMGINPGDINDGFVKIVVDKDTNHI LGMHVVGPQASILFQPYVNLMNSGVTPLTAINEEIASERTKRLREKGITREMDPRSVITV GETMSPHPSLVEVIMWTQVYYENRW >gi|292596531|gb|ADCV01000017.1| GENE 8 9941 - 11161 1223 406 aa, chain - ## HITS:1 COG:VCA0036 KEGG:ns NR:ns ## COG: VCA0036 COG3633 # Protein_GI_number: 15600807 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Vibrio cholerae # 2 400 4 405 405 423 60.0 1e-118 MNRFVKSINRVSLIQQIIIGLIIGILTALYVPDVANELALLGVLFVGALKGIAPILVFFL VIAAISKHRSGQKTGMGSVITLYLLGTFLSAALAVIVSFFFPTTLHLAAGAADAAPPQGI VEVMTTLLKNVVDNPVKALMTANYIGILGWALIIGGALRHAPMNTKEVIESIAQAITTVV GWIIRFAPLGIMGLVAESIATNGIEALIGYFQLLVLLLGSMIFVALVINPILSFIYLRRN PYPLVFKCLRESAIYAFFTRSSAANIPVNLDLAKRLKLNPDMYSVSIPLGATINMGGAAI TITIMTLAAAHTLGIVVDIPTAILLSVIATIGACGASGVAGGSLLLIPLACSLFGISNDV AMQVVGVGFIIGVLQDSTETALNSSTDILFTATADYAKRGYHQDWN >gi|292596531|gb|ADCV01000017.1| GENE 9 11508 - 12254 376 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 19 235 1 217 221 149 38 1e-35 MNTKEFKTYADKEKFVQGVFSNIAKNYDLMNTVLSFGQDYFWRKFSVKAMNIGPHQYVLD VACGTCVFTKEALRQEPTLKVEALDFNSEMLNQGRVRIEAAGLLNQVNLVQGDAMALPYE DNTFDAAMSGFAMRNVPDIKQVLSEMQRVVKPGGKVVVLELAKPSMFGFKQLYNFYFSYI LPIIGKLSKDNSSYAWLPESLRRYPHQSEILEIWKSLGYENATYHELTGGIVAVHEGVVP ENSIVDNK >gi|292596531|gb|ADCV01000017.1| GENE 10 12235 - 12966 793 243 aa, chain - ## HITS:1 COG:MA0311 KEGG:ns NR:ns ## COG: MA0311 COG2968 # Protein_GI_number: 20089209 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 12 243 22 256 256 99 30.0 6e-21 MKLSKHLLSKAVAIAAICATMGTTTLAAPQGTFDTSEINITGQASRSVAPNYAILTLGIT SQNTNINAAKSNNDRIMSNLISQLANLGVAKKDIYTSSISINPTSDYQDGKRINTGYNVS NHVTVKINNLDNVGKVVDAAVSAGANDINNLSFQNDVSQQLSDSLTTEAIQNGRHKAEVI AAALGRTLGPVKTVSISTTETSTMDSGYYRNPVMLKAALETTTPVEKGSLIVSQDANITY YLQ Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:29:12 2011 Seq name: gi|292596530|gb|ADCV01000018.1| Veillonella sp. 3_1_44 cont1.18, whole genome shotgun sequence Length of sequence - 135857 bp Number of predicted genes - 128, with homology - 124 Number of transcription units - 41, operones - 26 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 70 - 128 98.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. 1 1 Tu 1 . - CDS 596 - 1771 968 ## COG0477 Permeases of the major facilitator superfamily - Prom 1912 - 1971 7.5 - Term 1911 - 1965 9.3 2 2 Op 1 31/0.000 - CDS 2004 - 2897 1141 ## COG0341 Preprotein translocase subunit SecF 3 2 Op 2 . - CDS 2894 - 4168 1755 ## COG0342 Preprotein translocase subunit SecD 4 2 Op 3 . - CDS 4187 - 4753 515 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 5 2 Op 4 15/0.000 - CDS 4753 - 5043 375 ## COG1862 Preprotein translocase subunit YajC 6 2 Op 5 17/0.000 - CDS 5121 - 6236 1392 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 7 2 Op 6 . - CDS 6245 - 7270 1058 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 8 2 Op 7 . - CDS 7282 - 9072 1631 ## COG2385 Sporulation protein and related proteins 9 2 Op 8 29/0.000 - CDS 9075 - 10079 1017 ## COG2255 Holliday junction resolvasome, helicase subunit 10 2 Op 9 14/0.000 - CDS 10082 - 10690 684 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 11 2 Op 10 . - CDS 10690 - 11184 436 ## COG0817 Holliday junction resolvasome, endonuclease subunit 12 2 Op 11 . - CDS 11200 - 11277 60 ## - Prom 11314 - 11373 7.0 - Term 11345 - 11380 4.0 13 3 Op 1 . - CDS 11388 - 12125 1174 ## COG0217 Uncharacterized conserved protein 14 3 Op 2 . - CDS 12135 - 12707 739 ## COG4752 Uncharacterized protein conserved in bacteria - Prom 12728 - 12787 5.2 - Term 12723 - 12768 -0.9 15 4 Tu 1 . - CDS 12823 - 13917 688 ## COG0754 Glutathionylspermidine synthase - Prom 14052 - 14111 3.7 - Term 13969 - 14001 4.0 16 5 Op 1 . - CDS 14139 - 14699 439 ## Vpar_0587 hypothetical protein 17 5 Op 2 . - CDS 14711 - 15142 592 ## Vpar_0586 protein of unknown function DUF350 18 5 Op 3 . - CDS 15179 - 16273 1111 ## Vpar_0585 hypothetical protein - Prom 16293 - 16352 1.9 19 6 Op 1 30/0.000 - CDS 16355 - 17185 894 ## COG0336 tRNA-(guanine-N1)-methyltransferase - Prom 17240 - 17299 6.3 20 6 Op 2 . - CDS 17306 - 17803 191 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 21 6 Op 3 . - CDS 17803 - 18210 727 ## Vpar_0579 hypothetical protein 22 6 Op 4 19/0.000 - CDS 18225 - 18452 231 ## COG1837 Predicted RNA-binding protein (contains KH domain) 23 6 Op 5 23/0.000 - CDS 18474 - 18737 439 ## PROTEIN SUPPORTED gi|227372778|ref|ZP_03856257.1| SSU ribosomal protein S16P 24 6 Op 6 8/0.000 - CDS 18798 - 20150 1897 ## COG0541 Signal recognition particle GTPase 25 6 Op 7 . - CDS 20140 - 20406 314 ## COG2739 Uncharacterized protein conserved in bacteria - Prom 20509 - 20568 5.3 + Prom 20529 - 20588 10.2 26 7 Tu 1 . + CDS 20775 - 22100 1730 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes + Term 22154 - 22201 5.1 - Term 22141 - 22189 9.1 27 8 Tu 1 . - CDS 22289 - 22816 659 ## Vpar_0573 protein of unknown function DUF1393 - Prom 22847 - 22906 8.3 - Term 22971 - 23015 11.0 28 9 Tu 1 . - CDS 23038 - 25212 2868 ## COG2217 Cation transport ATPase - Prom 25345 - 25404 7.4 29 10 Op 1 . + CDS 25624 - 25878 146 ## COG1739 Uncharacterized conserved protein 30 10 Op 2 . + CDS 25872 - 26264 187 ## COG1739 Uncharacterized conserved protein - Term 26173 - 26209 2.2 31 11 Tu 1 . - CDS 26288 - 26473 302 ## Vpar_0570 hypothetical protein - Prom 26581 - 26640 11.4 + Prom 26578 - 26637 9.8 32 12 Op 1 . + CDS 26669 - 27559 1016 ## COG0583 Transcriptional regulator 33 12 Op 2 . + CDS 27631 - 27837 103 ## - Term 27635 - 27687 8.5 34 13 Op 1 13/0.000 - CDS 27748 - 28698 1442 ## COG0167 Dihydroorotate dehydrogenase 35 13 Op 2 3/0.000 - CDS 28698 - 29465 856 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 36 13 Op 3 24/0.000 - CDS 29470 - 32670 4318 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 37 13 Op 4 7/0.000 - CDS 32672 - 33739 1281 ## COG0505 Carbamoylphosphate synthase small subunit 38 13 Op 5 15/0.000 - CDS 33739 - 35025 1608 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 39 13 Op 6 . - CDS 35009 - 35959 987 ## COG0540 Aspartate carbamoyltransferase, catalytic chain - Prom 36134 - 36193 7.9 + Prom 35835 - 35894 5.9 40 14 Tu 1 . + CDS 36101 - 36199 73 ## + Term 36203 - 36246 8.4 - Term 36189 - 36234 9.7 41 15 Op 1 . - CDS 36309 - 39374 4271 ## COG3468 Type V secretory pathway, adhesin AidA 42 15 Op 2 12/0.000 - CDS 39387 - 40334 1106 ## COG1481 Uncharacterized protein conserved in bacteria 43 15 Op 3 12/0.000 - CDS 40350 - 41696 1371 ## COG0391 Uncharacterized conserved protein 44 15 Op 4 . - CDS 41712 - 42626 870 ## COG1660 Predicted P-loop-containing kinase 45 15 Op 5 . - CDS 42639 - 43451 734 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 43529 - 43588 7.9 - Term 43671 - 43711 7.6 46 16 Tu 1 . - CDS 43826 - 43957 100 ## COG1943 Transposase and inactivated derivatives - Prom 44164 - 44223 6.7 - Term 44432 - 44463 3.4 47 17 Tu 1 . - CDS 44486 - 45775 1794 ## Vpar_0557 S-layer domain protein - Prom 45806 - 45865 5.5 - Term 46328 - 46370 5.4 48 18 Tu 1 . - CDS 46383 - 47645 1833 ## Vpar_0555 S-layer domain protein - Term 48197 - 48253 16.3 49 19 Op 1 . - CDS 48259 - 48831 561 ## COG0681 Signal peptidase I 50 19 Op 2 . - CDS 48841 - 49710 971 ## COG1284 Uncharacterized conserved protein 51 19 Op 3 . - CDS 49700 - 50227 578 ## Vpar_0552 hypothetical protein - Prom 50253 - 50312 7.0 - Term 50257 - 50313 17.5 52 20 Op 1 . - CDS 50342 - 51556 1431 ## COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain - Prom 51578 - 51637 5.0 53 20 Op 2 1/0.000 - CDS 51644 - 52735 1172 ## COG0795 Predicted permeases 54 20 Op 3 . - CDS 52745 - 53464 246 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 55 20 Op 4 . - CDS 53474 - 54193 966 ## Vpar_0548 OstA family protein 56 20 Op 5 . - CDS 54209 - 54745 664 ## Vpar_0547 protein of unknown function DUF1239 57 20 Op 6 . - CDS 54732 - 55664 993 ## COG1560 Lauroyl/myristoyl acyltransferase 58 20 Op 7 13/0.000 - CDS 55679 - 56200 471 ## COG1778 Low specificity phosphatase (HAD superfamily) 59 20 Op 8 . - CDS 56200 - 57171 1063 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 60 20 Op 9 . - CDS 57183 - 58001 1107 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 61 20 Op 10 1/0.000 - CDS 58002 - 58733 718 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 62 20 Op 11 3/0.000 - CDS 58778 - 59890 1126 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 63 20 Op 12 . - CDS 59945 - 61249 1266 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase 64 20 Op 13 1/0.000 - CDS 61252 - 62982 243 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 65 20 Op 14 5/0.000 - CDS 62975 - 64117 1262 ## COG0763 Lipid A disaccharide synthetase 66 20 Op 15 5/0.000 - CDS 64117 - 64953 1174 ## COG3494 Uncharacterized protein conserved in bacteria - Prom 65134 - 65193 7.5 - Term 65278 - 65313 7.1 67 21 Op 1 25/0.000 - CDS 65321 - 66133 897 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 68 21 Op 2 4/0.000 - CDS 66153 - 66578 706 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 69 21 Op 3 . - CDS 66575 - 67414 791 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase - Prom 67458 - 67517 9.3 + Prom 67528 - 67587 6.6 70 22 Tu 1 . + CDS 67607 - 67684 67 ## 71 23 Op 1 . - CDS 67678 - 68580 989 ## COG1560 Lauroyl/myristoyl acyltransferase 72 23 Op 2 . - CDS 68587 - 69618 1187 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 73 23 Op 3 . - CDS 69650 - 70177 917 ## Vpar_0530 outer membrane chaperone Skp (OmpH) 74 23 Op 4 . - CDS 70189 - 71160 949 ## Vpar_0529 hypothetical protein 75 23 Op 5 . - CDS 71190 - 71678 663 ## Vpar_0528 outer membrane chaperone Skp (OmpH) - Term 71721 - 71773 15.6 76 24 Op 1 . - CDS 71785 - 73953 3021 ## COG4775 Outer membrane protein/protective antigen OMA87 - Prom 74016 - 74075 7.3 - Term 74066 - 74126 15.4 77 24 Op 2 . - CDS 74130 - 78419 4102 ## COG2911 Uncharacterized protein conserved in bacteria - Prom 78459 - 78518 8.1 - Term 78556 - 78583 0.1 78 25 Op 1 . - CDS 78599 - 80059 1842 ## COG1538 Outer membrane protein 79 25 Op 2 13/0.000 - CDS 80102 - 81361 1153 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 80 25 Op 3 23/0.000 - CDS 81361 - 82119 371 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 81 25 Op 4 . - CDS 82141 - 82902 891 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 82 25 Op 5 . - CDS 82933 - 84915 2378 ## Vpar_0521 hypothetical protein 83 25 Op 6 . - CDS 84928 - 85212 519 ## Vpar_0520 hypothetical protein - Prom 85240 - 85299 10.8 84 26 Tu 1 . - CDS 85301 - 86641 1346 ## Vpar_0519 hypothetical protein - Prom 86714 - 86773 9.8 - Term 86757 - 86819 6.4 85 27 Op 1 1/0.000 - CDS 86869 - 88254 1343 ## COG1077 Actin-like ATPase involved in cell morphogenesis 86 27 Op 2 2/0.000 - CDS 88235 - 89500 1502 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase - Prom 89616 - 89675 8.5 - Term 89643 - 89682 6.8 87 28 Op 1 . - CDS 89703 - 90665 1471 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins 88 28 Op 2 . - CDS 90725 - 91369 870 ## COG0176 Transaldolase 89 28 Op 3 . - CDS 91383 - 92663 1826 ## COG0172 Seryl-tRNA synthetase - Prom 92710 - 92769 9.0 90 29 Tu 1 . - CDS 92789 - 93742 1042 ## COG3965 Predicted Co/Zn/Cd cation transporters - Prom 93771 - 93830 7.5 - Term 93901 - 93945 8.3 91 30 Op 1 2/0.000 - CDS 93985 - 95265 1059 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 92 30 Op 2 . - CDS 95367 - 96710 1147 ## COG2252 Permeases - Term 97247 - 97283 7.3 93 31 Op 1 2/0.000 - CDS 97301 - 98818 1973 ## COG1190 Lysyl-tRNA synthetase (class II) 94 31 Op 2 1/0.000 - CDS 98848 - 99321 754 ## COG0782 Transcription elongation factor - Prom 99359 - 99418 4.7 - Term 99341 - 99388 4.9 95 31 Op 3 1/0.000 - CDS 99445 - 100431 587 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase - Prom 100456 - 100515 5.0 - Term 100446 - 100477 3.4 96 31 Op 4 4/0.000 - CDS 100526 - 101293 841 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 97 31 Op 5 . - CDS 101303 - 102277 1022 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 102377 - 102436 11.2 + Prom 102310 - 102369 11.4 98 32 Tu 1 . + CDS 102551 - 103792 780 ## COG2966 Uncharacterized conserved protein + Term 103797 - 103836 8.0 - Term 103785 - 103823 8.6 99 33 Op 1 11/0.000 - CDS 103846 - 105774 1466 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 - Term 105804 - 105845 7.7 100 33 Op 2 10/0.000 - CDS 105863 - 106408 746 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 101 33 Op 3 . - CDS 106432 - 107430 519 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 102 33 Op 4 . - CDS 107399 - 108295 942 ## COG0248 Exopolyphosphatase - Prom 108326 - 108385 5.2 - Term 108347 - 108389 4.0 103 34 Op 1 . - CDS 108392 - 108793 674 ## PROTEIN SUPPORTED gi|227372859|ref|ZP_03856338.1| predicted RNA-binding protein with ribosomal protein S1 domain 104 34 Op 2 . - CDS 108864 - 109196 289 ## Vpar_0499 septum formation initiator - Prom 109233 - 109292 8.6 105 35 Op 1 . - CDS 109374 - 110321 941 ## COG0039 Malate/lactate dehydrogenases - Prom 110345 - 110404 7.4 106 35 Op 2 . - CDS 110416 - 111231 662 ## Vpar_0497 hypothetical protein - Prom 111271 - 111330 1.6 107 36 Op 1 17/0.000 - CDS 111333 - 111803 255 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 108 36 Op 2 15/0.000 - CDS 111803 - 112165 138 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 109 36 Op 3 4/0.000 - CDS 112165 - 112998 1057 ## COG0294 Dihydropteroate synthase and related enzymes 110 36 Op 4 . - CDS 112991 - 113560 391 ## COG0302 GTP cyclohydrolase I 111 36 Op 5 . - CDS 113569 - 115125 1656 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 115136 - 115167 3.4 112 37 Op 1 2/0.000 - CDS 115236 - 116375 1209 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 116407 - 116466 4.3 113 37 Op 2 1/0.000 - CDS 116502 - 117440 889 ## COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF - Prom 117466 - 117525 2.8 - Term 117485 - 117518 5.1 114 37 Op 3 1/0.000 - CDS 117530 - 119131 1739 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 115 37 Op 4 . - CDS 119128 - 119946 750 ## COG2367 Beta-lactamase class A 116 37 Op 5 44/0.000 - CDS 119959 - 120906 614 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 117 37 Op 6 44/0.000 - CDS 120906 - 121886 500 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 118 37 Op 7 49/0.000 - CDS 121886 - 122785 988 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 119 37 Op 8 . - CDS 122778 - 123710 920 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 123738 - 123797 6.9 + Prom 123766 - 123825 5.6 120 38 Op 1 . + CDS 123846 - 124679 691 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 121 38 Op 2 . + CDS 124701 - 125285 441 ## Vpar_0482 protein of unknown function DUF805 - Term 125319 - 125372 11.2 122 39 Tu 1 . - CDS 125415 - 126584 789 ## Vpar_0481 hypothetical protein - Prom 126650 - 126709 9.3 - Term 126676 - 126728 8.4 123 40 Op 1 5/0.000 - CDS 126857 - 130444 2598 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components - Prom 130482 - 130541 3.3 - Term 130558 - 130594 10.3 124 40 Op 2 31/0.000 - CDS 130644 - 131663 1168 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 125 40 Op 3 . - CDS 131654 - 133042 1742 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 133065 - 133124 3.0 126 40 Op 4 . - CDS 133128 - 133559 438 ## COG1959 Predicted transcriptional regulator - Prom 133598 - 133657 7.0 - Term 133732 - 133771 5.2 127 41 Op 1 . - CDS 133779 - 134273 501 ## COG0521 Molybdopterin biosynthesis enzymes 128 41 Op 2 . - CDS 134282 - 135142 697 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 135173 - 135232 8.6 - 5S_RRNA 135598 - 135702 85.0 # CR954253 [D:49914..50030] # 5S ribosomal RNA # Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 # Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. Predicted protein(s) >gi|292596530|gb|ADCV01000018.1| GENE 1 596 - 1771 968 391 aa, chain - ## HITS:1 COG:ECs3121 KEGG:ns NR:ns ## COG: ECs3121 COG0477 # Protein_GI_number: 15832375 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 5 384 4 382 396 174 31.0 3e-43 MDSNRLWSPAFTNYGISSGILYMTQYVLVAALPIVITSELAGSDLDAGLAMTYFQIGTIL CRIFAGRLIDGFNKRIVLLISTALFFIIMGLFNFTTSLEAVFVLRGLHGVVFALGTTVMA TLAVLVLPPSRKGEGVNMFAIFSNIAMVLGPAIGLYALSSYGSMALYIFLTVMTGLAMVL SNIIPLSKELALPKQSKYKGWHISQFIENKSLPWALMGLFIGFTYSGVLVFIPIELNSMG AGIWGSAFFAIFALMIIISRPIVGKIYARYGSKIIIYTGLGLFILGLFGLGLAITPLAIL FTAPLLGLGYGAAQPAFQALAIQSAPIERAGVSTATYFLALDISVGAGSVILAVLASAWG YQYLYMFTALVMVIALALYHIWVKRYTPLEL >gi|292596530|gb|ADCV01000018.1| GENE 2 2004 - 2897 1141 297 aa, chain - ## HITS:1 COG:PM0226 KEGG:ns NR:ns ## COG: PM0226 COG0341 # Protein_GI_number: 15602091 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Pasteurella multocida # 6 282 27 299 324 198 38.0 9e-51 MTLDVIKHHRWWFAISSTLVIISLISIFTKGFNFGIDYTGGTIVEVVFDQPVEVSQVRDV LKEYNLENAQIQLSGDTTGDTAGEDVMIRTRNLESSESAAVVDSLTKSIGNNTVKRIETV GAVIGSEVTEHALLNLVIAFAALALYISYRFEYKVAISALVAIFHDLIMVLGVFSYFQLE IDASFLAAILTVVGYSMNESVVIFDRVRENTHTHKRSDTFADLANASITQSIHRSFYTLA TVMFACVSLYLFGGDTTKNFALCMIIGFASGAYSSICVATSLWVMWKSRNKNDVRNQ >gi|292596530|gb|ADCV01000018.1| GENE 3 2894 - 4168 1755 424 aa, chain - ## HITS:1 COG:FN0699 KEGG:ns NR:ns ## COG: FN0699 COG0342 # Protein_GI_number: 19704034 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Fusobacterium nucleatum # 1 404 1 407 411 296 42.0 5e-80 MNGKAIIKFLVVIAAIIGLFAYFIQPLAGSLKQGLDLQGGTHIVLEAEDSATGTADNDAV ERAKQILERRINEMGLSEPLVQREGARRIIIELPGVKDPDEAIKRIGKTAVLEFKNDQGQ TVMTGDDLKDAKEELGQNKQPLVAIELSDEGAKKFADLTSKNIGRRIAITLDGKELTNPV VQQAITGGKATISGSQSLEEAKDLAILLRSGALPVKINVLEVRTVGPSLGQDSKDKSVVA FSAGIAMIMIFLVILYRFSGIVANIALLVYVMLLLLVLGKGFNATMTLPGIAGIILSMGV AVDANILIFERFKEEVFSGKSMRVAMEAGFSRALATITDANVSVIITAGILTILGSGPVK GFAISLGVGVVVSMFTAITVSHFLLRLLIDCNFTNHPFWFGANISPSTSADAFAPKSLKG GKRK >gi|292596530|gb|ADCV01000018.1| GENE 4 4187 - 4753 515 188 aa, chain - ## HITS:1 COG:BH1417 KEGG:ns NR:ns ## COG: BH1417 COG0212 # Protein_GI_number: 15613980 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Bacillus halodurans # 1 184 1 184 186 90 31.0 2e-18 MNTKEAVRQACKSQRAALSVADCRSWTPMLTNQIVNSPEYISAKNIMAYLAMPKEANLDD VIRHALEHGKSVYVPVCTDKTTMIAVRLKSLESITRGVLNIRIPAEPYDIIDPCDLDLIL VPGAGFDRQGGRMGMGNGYYDRFLKELSPSTFMGVCWTVQLWETPIPMEALDQRMSKIVT EQGIIHCV >gi|292596530|gb|ADCV01000018.1| GENE 5 4753 - 5043 375 96 aa, chain - ## HITS:1 COG:BH1229 KEGG:ns NR:ns ## COG: BH1229 COG1862 # Protein_GI_number: 15613792 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Bacillus halodurans # 13 89 10 86 88 74 46.0 4e-14 MGDIQQILQTSWPILLMVVIFYFLLWRPQKKQQKERASLLGSLKKGQKIVTIGGIYGEIV ELDDEKVKVQVSEKVELTFARTAVANVLSKKNKEEK >gi|292596530|gb|ADCV01000018.1| GENE 6 5121 - 6236 1392 371 aa, chain - ## HITS:1 COG:lin1565 KEGG:ns NR:ns ## COG: lin1565 COG0343 # Protein_GI_number: 16800633 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Listeria innocua # 1 369 1 369 379 546 67.0 1e-155 MPSIIYELQKTCPHTGARAGLLHTPHGTFQTPMFMPVGTQATVKTMTPEELKAMGSQVIL SNTYHLFLRPGPELVEEAGGLHKFMNWDQAILTDSGGFQVFSLGDMRKITEDGVTFRSHI DGSKQFLSPEVATKVQEQLGSDIAMAFDECIPYPADHDYAKRSTARTTRWAHRCQEARKA HDRQGMFGIVQGGMYKDLRKQSAEELVAMDFEGYSIGGLSVGEPHDLMNEILEYTTPLLP TNKARYLMGVGTADCLVEGVARGVDMFDCVYPTRVARNGMAMTWNGRLNIRNAQFAHDWG PLEEGCQCYTCKNYSRAYIRHLYKAEEILALRLVTYHNLYFLLEFMRQMRQAILEDRFPQ FRMQFWDSFKK >gi|292596530|gb|ADCV01000018.1| GENE 7 6245 - 7270 1058 341 aa, chain - ## HITS:1 COG:L16514 KEGG:ns NR:ns ## COG: L16514 COG0809 # Protein_GI_number: 15673557 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Lactococcus lactis # 1 341 1 342 345 413 55.0 1e-115 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVKHKGHFYDLLEELHEGDVLVFN NTKVIPARLYGHRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEFDDRLSGVII DKTNFGGRIIQFTCNGVFDDVIQEIGEMPLPPYIHEKLEDKDRYQTVYAKEKGSAAAPTA GLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEMHSEFFVVPQDTANRIN AAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPGYKFKMIDALVTNFHLP QSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFIR >gi|292596530|gb|ADCV01000018.1| GENE 8 7282 - 9072 1631 596 aa, chain - ## HITS:1 COG:sll1283 KEGG:ns NR:ns ## COG: sll1283 COG2385 # Protein_GI_number: 16329811 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Sporulation protein and related proteins # Organism: Synechocystis # 205 595 37 389 391 182 32.0 1e-45 MKTKRLQLMIMATLFLGVNIGGASIAHGATLQNKSAVVTKKPTPKSTVSNTTVSKVNTTK KSSFRPLATKPVAKPVATTKTVFKSTATSTVVKPSAKPVNVAKPATATKPVTPAKPVSAT KSTSTAKSSTNATAAKSAATGKATMATKPAASATAKPATKPAVTGDKPVEQKRATEKTAT KKVVKTTDVNSIQANTAVITRNKVGSVVTPATERKENMPNVRVLLGSRSSDATVTSTASM VVLNSGNGQVSTISANRGTSIGIRGGKIAVNGKAIDSVVTLKPANSDAPFLFEGKGYRGG LTLRANNGTMMVINSVPLEDYLYGVVPQEVVPSWPAAALEAQAVAARTYALHTMEENKGK FYDVSNSTDHQVYSGVSGESQATTNAVNKTKGIVMLYDQRPINALFHSDGGGYTEDSVNV WGSDVPYLKGVKDFSTGTSTSNWTVTTSRQALESKLNAASKGVGKLKSIQLTPLGKPGQQ TSDRGVSGRIKSATFIGTSGKTTVDGDALRSILGLKSTLFDFYVNHNPAKGTGKAYHSFT GKNDTVYIKGHGWGHGLGMSQWGAAEMAKRANPGDINYYQTILRHYYSGITLKKMY >gi|292596530|gb|ADCV01000018.1| GENE 9 9075 - 10079 1017 334 aa, chain - ## HITS:1 COG:BS_ruvBm KEGG:ns NR:ns ## COG: BS_ruvBm COG2255 # Protein_GI_number: 16081161 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Bacillus subtilis # 6 327 6 328 336 421 65.0 1e-118 MNEEVRLVGNGEHEEDIWQYSLRPKFFNEYVGQEEAKGNLNVYIQAAKQRGEALDHVLLY GPPGLGKTTLAGIIANELGVNFRITSGPAIEKSGDLAAILTNLDDHDVLFIDEIHRLSRS VEEVLYSAMEDYAIDIIIGKGPSARTVRIDLPKFTLVGATTRAGALAAPLRDRFGIINRL EYYKQPELEFIVTRAAEILNIGIVSTGASEIARRSRGTPRIANRLLKRVRDFAQVIGDGV ITQEIADEALQRLYVDKMGLDRIDRRVLECIIEKYDGGPVGIDTIAAAISEERDTIEDVY EPYLMQLGFLGRTPRGRVATKLAYEHLGISQTGK >gi|292596530|gb|ADCV01000018.1| GENE 10 10082 - 10690 684 202 aa, chain - ## HITS:1 COG:SA1468 KEGG:ns NR:ns ## COG: SA1468 COG0632 # Protein_GI_number: 15927222 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Staphylococcus aureus N315 # 1 195 1 195 200 138 42.0 5e-33 MIGYVRGIVTHLFKESCYVDVHGVGYRVYVPTTTRQQLTEDHEATLFTYLNVREDAMQLY GFWTEEEYELFILLISVSGIGPKVGLGILSGMTPEAFKLAIINGQVQQLTKLPGIGKKSA ERLVLELKDKIAKMTHISAESPATIQPVGVAANGAAGEAIEALVSLGYLERDVADIVESL DDGKRDVSELIKVSLIELGKGR >gi|292596530|gb|ADCV01000018.1| GENE 11 10690 - 11184 436 164 aa, chain - ## HITS:1 COG:FN0214 KEGG:ns NR:ns ## COG: FN0214 COG0817 # Protein_GI_number: 19703559 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Fusobacterium nucleatum # 1 153 1 151 190 159 51.0 2e-39 MRIIGIDPGTAICGYGIIDVKGSKLTPVAYGAITTPKELTDSQRLEILFNDLSDLLEEYR PDKFGVEELFFNRNVTTAIKVGQARGVILLAAEQQRIPIYEYTPLQIKQAVTGYGKADKN QVIYMTMNILGIREKIKPDDTADALAVAICTAHSSHNDRLKRLV >gi|292596530|gb|ADCV01000018.1| GENE 12 11200 - 11277 60 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNFDVKLCYNKIDYVMEVGGSLSHF >gi|292596530|gb|ADCV01000018.1| GENE 13 11388 - 12125 1174 245 aa, chain - ## HITS:1 COG:CAC2295 KEGG:ns NR:ns ## COG: CAC2295 COG0217 # Protein_GI_number: 15895562 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 241 1 242 246 238 53.0 7e-63 MSGHSKWANIKHKKGKTDALKAKLATKIGREITVAARMGGADPTGNMRLKLALQKARENN IPKDNIQRAIDKGIGATDMNAYEEIVYEGYGPAGVAVTVEVMTDNRNRAAADVRHAFSKQ GGNLGESGCVGWMFKSKGVFVIDKEGHDEDELTLLALDAGAEDLKSEDDVFEIYTTPEDF DAVEAALADAGIETEVAKITMIPDTTIELSGDDAVKMQKMLDVLDDLDDVQNVYHNGIFP DDEEE >gi|292596530|gb|ADCV01000018.1| GENE 14 12135 - 12707 739 190 aa, chain - ## HITS:1 COG:FN0282 KEGG:ns NR:ns ## COG: FN0282 COG4752 # Protein_GI_number: 19703627 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 4 185 5 186 187 187 47.0 1e-47 MANLYIGLVHYPIMNKHKEVITTAITNYDIHDIARASITYDVSKYFVIHNIPAQRELVST IMEHWKSGFGSTYNPDRKDAFTGVELVNSIAVAVRTIEDIEGIKPIVATTDARTYDNTIS YARMREHLENEGRPVLVLFGTGYGMTKETMESFDYILEPIYGHGEYNHLSVRSAVSIILD RLRGEAWWDK >gi|292596530|gb|ADCV01000018.1| GENE 15 12823 - 13917 688 364 aa, chain - ## HITS:1 COG:ECs5162 KEGG:ns NR:ns ## COG: ECs5162 COG0754 # Protein_GI_number: 15834416 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Escherichia coli O157:H7 # 20 360 96 382 387 74 26.0 3e-13 MDMPENLIPYLHRGNPLGLPTWLSRFDFVLDDRRQLRMVEINADTPCFLIESYYANGVAA RYFDKVDPNIDAYNELERFLKRVYEGTSRKKYSVTNKHHNMMTDNEIEPFVFGCFHDYLE DYGTTQFLLHAMKSACPEADIRFLSFYDMVIDDDGILLSDGSHAANLYRLHPMELLIDET TADGEPLGEMFLDLYNEYRFNLFNPPEAIILQNKSFMSLVYALYLTNQFFTGPERDIIKR YLTPSYFESDFPNLDDGLYIQKEIWGREGRNIQVVQKRGNQGELYMEKFVDNYDDIVCRD SQKVMYQEFIKQKHFTHTVDSGTKEGCLTLSCFMLGDQASAVGCRFSPEEIAGTEAYFVP LLVE >gi|292596530|gb|ADCV01000018.1| GENE 16 14139 - 14699 439 186 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0587 NR:ns ## KEGG: Vpar_0587 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 186 1 186 186 299 84.0 3e-80 MYKPSKKTIYITSAFAAVAGLVGVSSYWNDIAYVVCDKIYPKANDGEVRLKDNQGNRYSL LNHGDGKETALYDDNRSVTFHRDTSGNLVWDAGLAGLLPSIAAGYYMFYGFNPPTARMDG RTMTYRVAAPLKPYEETTPYTASGSNVHSSLGRRTYLDYEKRRSSKASSIGQKSGFGSAG VRSSSS >gi|292596530|gb|ADCV01000018.1| GENE 17 14711 - 15142 592 143 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0586 NR:ns ## KEGG: Vpar_0586 # Name: not_defined # Def: protein of unknown function DUF350 # Organism: V.parvula # Pathway: not_defined # 1 143 1 143 143 226 92.0 2e-58 MIYIPDVLLTIFYACFGIFLMLTANTVIDFFVPGKFSEEIKRGNCAVAWLSAGSFIGIGE ILRAVIMSPVVTTADTSLLHGVVASIVYAILGIILFVTGYMFINLWHRKYNLSEEIMRGN TAAGILVFGIFVGLALVVSGAVH >gi|292596530|gb|ADCV01000018.1| GENE 18 15179 - 16273 1111 364 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0585 NR:ns ## KEGG: Vpar_0585 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 11 360 1 350 356 520 71.0 1e-146 MILPIRARLFMEFNCYDVLEVQGSRYVITEKIKYNEIIPKADQEQAYKAKPSMQKSPGDY WHEYGLEDVEGSDNIWVTIEYNDNEWCTVSRTSYRKRAPKGFTLHQIGLEKVVAVDGDSG ASVGDRAGYKEYQLPCEGGASVFFEENWFKGEKMFAEGARVPLRNIRLCNDTAANAISKK KRNQRLKKRFEGVASAIGVGALFFMCLISWEGDMSWHDVRATFGFPYTAKEHMHDTSVYY TKTDSENEYIYTSSLDPVSTALDLIESLDGEIRNEGDDLQEGREVIVFYDAKSAYIITNT DGQTRVKVCEPGKLTQEDLDIINGTMRKSHVLDSYAYMVRQKDSGGRDKFYNGYNHNAAS PYNR >gi|292596530|gb|ADCV01000018.1| GENE 19 16355 - 17185 894 276 aa, chain - ## HITS:1 COG:SA1083 KEGG:ns NR:ns ## COG: SA1083 COG0336 # Protein_GI_number: 15926823 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Staphylococcus aureus N315 # 1 262 1 236 245 263 49.0 2e-70 MRIDIVSLFPDFFDAFFNHSIIKRAIEAKRLSVDVTNPRDFSHNKHGQVDDTPYGGGAGM LMMAPPIFEAVESVIAQYDSDINDTYTTDEMCDEMSLIGNPNESIRRRIIFMGPTGQPFT QEKARELASYDQVVLICGHYEGVDYRVEKHLVDETISIGDYVLTGGELPAMVVTDAVARM IPGVLGAASGAQEDSFYESLLECPQYTKPPEFRGWTVPDVLRSGHHKNIATWRQKEALKR TRLLRPDLLERPLTKEEIKLLKEIVEEESVRHKGEE >gi|292596530|gb|ADCV01000018.1| GENE 20 17306 - 17803 191 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 5 163 3 163 179 78 32 2e-13 MKHNDLITIGVIIAPHGVRGDLRIMPQTDFPERFMHMDACYIDGKEYHVASARFHKQFVL ASFKEIPDRNTAELFGKKEIQVRREDLVELPEGRYYIFDIIGLEVQDTNGNVLGTVTDVL QPGANDVYVVSKDGEPDQLFAAIEEVVKDIDVENKLMIVDPPEWI >gi|292596530|gb|ADCV01000018.1| GENE 21 17803 - 18210 727 135 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0579 NR:ns ## KEGG: Vpar_0579 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 135 1 135 135 195 100.0 4e-49 MEEMTLRVPVAVKAKVTDDLKAKIVSDLETRLDMVNKDLEAIEFQAQRILADAAKVDATS LTAIRQQIDEEKNKRLAFKEEVTAKLKDAKELSLGTEIPQGTLEQTVTVKIGDNLDALMG AEILLEDGKIVAFRQ >gi|292596530|gb|ADCV01000018.1| GENE 22 18225 - 18452 231 75 aa, chain - ## HITS:1 COG:CAC1756 KEGG:ns NR:ns ## COG: CAC1756 COG1837 # Protein_GI_number: 15895033 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Clostridium acetobutylicum # 1 75 1 75 75 67 62.0 8e-12 MIELISLIAKSLVKQPDAVSVTMVQKGNVEVYELHVAPEDMGKVIGKQGRIAKAIRSVVK AAAIKENKKISVDIV >gi|292596530|gb|ADCV01000018.1| GENE 23 18474 - 18737 439 87 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372778|ref|ZP_03856257.1| SSU ribosomal protein S16P [Veillonella parvula DSM 2008] # 1 87 1 87 87 173 100 3e-42 MLKIRLTRLGAKKAPFYRIVVADARAPREGRPVDTIGQYDATKQPAIVNVDEEKALAWLA KGAQPTDTVRSLFKKQGVMQKFADAKK >gi|292596530|gb|ADCV01000018.1| GENE 24 18798 - 20150 1897 450 aa, chain - ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 434 1 433 451 485 59.0 1e-136 MAFDSLSEKLQEAFQSLKGKGKITEDDVNLALRQVRTALLEADVNFMVAKDFVKSIKEKA LGEEVFGSLNPAQTVIKIVNDELTALLGGTQSRIMISSKPPTIIMLVGLQGAGKTTTAGK LAVYLRKQGKRPMLVAADVYRPAAITQLQVVGKQIDIPVFSDETPGANPVDIARRAVEQS THMLKDVVIIDTAGRLAIDEVLMDELSNIKAAVRPHEILLVVDSMIGQDAVTTAQTFNEK LGVDGVILTKLDGDARGGAALSIKAVTGLPIKFTGVSEKMDGFDVFYPDRMASRILDLGD FKTLIENVQGAIDEEEAREMAKKMAKNNFTLDDFLKQMNQVRKLGPLQNIIGMLPGMGQV KDQLKDLDLNSKEVRRIEAIITSMTAAERENPSILNGSRRKRIALGSGTQVQDVNRLLKQ FEEARKMMKRMQGLRGGKGGFPGMPKLPFM >gi|292596530|gb|ADCV01000018.1| GENE 25 20140 - 20406 314 88 aa, chain - ## HITS:1 COG:SP1288 KEGG:ns NR:ns ## COG: SP1288 COG2739 # Protein_GI_number: 15901148 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 3 76 28 101 110 63 44.0 7e-11 MSLQLHHEDDMSLGEIAEELGVSRQAVHDNLQRARHILNDYESKLHLVAQYEQREGLLSQ LKATLPKEVLAETKVQQVLAQMEGYYGI >gi|292596530|gb|ADCV01000018.1| GENE 26 20775 - 22100 1730 441 aa, chain + ## HITS:1 COG:SP1588 KEGG:ns NR:ns ## COG: SP1588 COG1249 # Protein_GI_number: 15901430 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Streptococcus pneumoniae TIGR4 # 6 438 4 435 438 435 53.0 1e-122 MNTKQYDIIVLGFGKAGKTLAAKFGSMGKSVAMIEENPLMYGGTCINIACIPTKTMIIAA SKGLSYDQVLNQREVVTSRLRNKNFGMLDTNEHVDVYTGHGAFISNKEIAVTAGEDKIIL SADTIVINTGAVAIKPNISGIDTATGFYNSTEIQQLPTQPSTLGVIGAGPIGLEFASLYA KLGAKVTVFNIESSILKREEPIVQELATEYLTEQGITILNNVTLESVSNDGDKPVITANN QNYTFDAVLYATGRKANTANIGLEHTDIATNERGAIVVNDTCESSVPGVYAVGDVNGGPQ FTYISLDDFRIVFGTLTGNSQYTLKDRKNIPYTTFLTPPLSRVGLTEEDAINQGYTVKTK EMLVATMPRAHVNDYLKGAFKIVVDADNDLILGATLYSQGAEELINLIKMAMDNNIPYTY FKNQIFTHPTMAENLNDLCNF >gi|292596530|gb|ADCV01000018.1| GENE 27 22289 - 22816 659 175 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0573 NR:ns ## KEGG: Vpar_0573 # Name: not_defined # Def: protein of unknown function DUF1393 # Organism: V.parvula # Pathway: not_defined # 1 175 1 175 175 249 98.0 2e-65 MKLSTRDIVYIGFIAALCAVATTIRIEIPGGAMVHLGSAALFTTSILFGGLYGGLGAAIG SALFDLFGGHTQYIVFSFFIKGIAGLIVGGMTAGYLPPSITKPTASFGRILVALIIGAVW TALGYFLAWWFVLESAVVAASKIQYSLITSAAGIVVAIVLTPKLQTIVRRLFTKN >gi|292596530|gb|ADCV01000018.1| GENE 28 23038 - 25212 2868 724 aa, chain - ## HITS:1 COG:BH0557 KEGG:ns NR:ns ## COG: BH0557 COG2217 # Protein_GI_number: 15613120 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus halodurans # 3 724 72 805 806 605 46.0 1e-172 MSVKKQEFDITGMHCAACVKRVENVVSKLDGVESVKVNLLTRKGSVEYKDGAAVDSQQII DAITNIGFGAAEADETKQEIEKVNLKPHIIRLIIAACMAVPMMINMTLHRFGIQALPVWV EFVLATIAQFGPGLMFYKSAWSAVKNGALTMDVLVVMGTTVAYLFSIYNWQFHPELGPHG IYFETSAWLITFILLGKLLEEIAKGRTSEALQKLIALQPATAHVLRDGEFIDIPTSKVVA GDILQVRAGEKIPVDGTITEGYSTVDEAMLTGESLPVEKQVGSEVIGATINLSGAFTMEA KRIGSDTMLSQIIKVVEEAQTSKASIQRIADIVAQYFVPTVIGLAVLTGLVWYFIMGDSI NVALINATAVLVIACPCALGLATPTSIMVGSGLGAEHGVLIKSAEYLEKAGKLDAIVMDK TGTLTQGVLDVTAFKNYNGDESTNMSIMMALESGTSHPIAKAMVYYGEDHGYKGKAVELE SFADVPGKGLQGAYQGVSVQLGHSRWMNELGYDLTAVQEDILQFEEQGASVSVLAVDGVV SALWAVEDELRPETIEVVKELHAQGIDVWMLTGDNRRTAQYIAKQAGITHVIAEVLPQDK ASKVKELQDKGLVVGMVGDGINDAPALVTADIGFAIGSGTDIAVEAADIVLVRNDLHTLV QAVRLSRKTMTNIKQNLFWALIFNCIGIPLAAIGALNPMIAGTAMAFSSVTVVGNSLRLK RAKI >gi|292596530|gb|ADCV01000018.1| GENE 29 25624 - 25878 146 84 aa, chain + ## HITS:1 COG:lin2660 KEGG:ns NR:ns ## COG: lin2660 COG1739 # Protein_GI_number: 16801721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 11 69 5 63 211 61 49.0 4e-10 MSESISPTVEFISLAKEFRHEYVVEKSRFITTVYPCKTEEEAQTFISRINKEFWDARHNC TAYGKNNNDLPIMENHQVQQVNQC >gi|292596530|gb|ADCV01000018.1| GENE 30 25872 - 26264 187 130 aa, chain + ## HITS:1 COG:SP2209 KEGG:ns NR:ns ## COG: SP2209 COG1739 # Protein_GI_number: 15902016 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 129 80 209 211 80 41.0 6e-16 MLEVLKKTGITNVAVVVTRYFGGIKLGAGGLIRAYSHSVAETLRLAPKELHTTRTRVQAK IDYSLYGAVERYLQDENLHYEASFGEYVDITILIPPTDVERIQKALQDISHGAATCTVLD SIEVVLPLDN >gi|292596530|gb|ADCV01000018.1| GENE 31 26288 - 26473 302 61 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0570 NR:ns ## KEGG: Vpar_0570 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 61 1 61 61 95 100.0 7e-19 MGVVKRTLGQAIRNWEARRLMTARNKISRKKQLERVWPYPMTKEKRRELGQGIAGLVNNG N >gi|292596530|gb|ADCV01000018.1| GENE 32 26669 - 27559 1016 296 aa, chain + ## HITS:1 COG:CAC0745 KEGG:ns NR:ns ## COG: CAC0745 COG0583 # Protein_GI_number: 15894032 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 1 296 1 290 293 127 28.0 3e-29 MDTSYYHNFITLVQTGNMTQAAEILHITQPALSKQLKYLEAEFGAQLINIKRGQRGSNLQ LTDAGKIFYEKAQQLCSIEESTYNAVQQLNSRIEGTLRIATSASRSTPIVQQYLPAFSMK YPSVHFEIYEGLMTNVVTQLINGSAELGIANIQMVDIDKFDILLTQEEHLYAIFRRDVFW TDREHDTITWEDIKKCPLSLSGGSVRMIMQSSLTDMEQLNAVAITTTKSSAIEWASSGRT VSLVPMDAKELINHRKMARIKLPEFSGDFKKAFITLKGHALSPVAQQFIDFYKAYV >gi|292596530|gb|ADCV01000018.1| GENE 33 27631 - 27837 103 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPIQYIRKDLVQFVLGLFVSDLTLRQCLWLLKFTVDMILLSLMNSTYNISDAVKIILFYI FAHFTGNT >gi|292596530|gb|ADCV01000018.1| GENE 34 27748 - 28698 1442 316 aa, chain - ## HITS:1 COG:BH2534 KEGG:ns NR:ns ## COG: BH2534 COG0167 # Protein_GI_number: 15615097 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Bacillus halodurans # 15 312 3 300 305 289 50.0 4e-78 MRERDLNNTVTPNPKLAIDYCGIKMKNPIIAASGTFGNGPEYAGYLDLSNEVGAISVKGL TPKGRHGNPGTRIAETPSGVLNCIGLENPGAEHFVKEILPDIKKYDVPLLANMSAGTIDE FTWMAETLSVDGIAGLEVNVSCPNVECEGMAFGVDPKVVESVTKAVRKVTDKPVIVKLSP NVTDIVEIAKAVEAGGGNGVSLINTLLGMAIDIHRRKPVLGNTYGGLSGPAVKPVALRMV HQVYKGVTIPIIGLGGIMTGTDAIEFMMAGAQAVQVGTATMVDPTAISRITREMSEYVEQ YNLNSITDIVGAVHQA >gi|292596530|gb|ADCV01000018.1| GENE 35 28698 - 29465 856 255 aa, chain - ## HITS:1 COG:FN0423 KEGG:ns NR:ns ## COG: FN0423 COG0543 # Protein_GI_number: 19703765 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Fusobacterium nucleatum # 5 253 3 256 259 165 36.0 8e-41 MSGYVEQGEVVRNEQIGSDVWIMDVHAPKQAAEAKVGQFCNVRVADSTAPLLRRPISYAG FDARKGTITLLYRVVGKGTEIMTRLVPGDTLDCLGPLGEPFVTSNNMLLVGGGVGIAPML CIASHLQKDEEAQVILGFRNESETFWADLFKDTPVQVHITTDDGSVGTKGFPTAIMPDLI NANSFTSVMTCGPMPMMKGVAQVAKELNVPCQVSLEERMGCGTGGCLGCACDGAGGKRYK VCKDGPVFPAEEVFF >gi|292596530|gb|ADCV01000018.1| GENE 36 29470 - 32670 4318 1066 aa, chain - ## HITS:1 COG:BS_pyrAB KEGG:ns NR:ns ## COG: BS_pyrAB COG0458 # Protein_GI_number: 16078616 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus subtilis # 7 1046 9 1048 1071 1280 61.0 0 MTSEAKKVLVIGSGPIIIGQAAEFDYAGTQACRSLREEGYKVVLVNSNPATIMTDTDIAD RVYVEPISLEFVTEVIKKERPWGLLATLGGQVGLNMAVQLSEAGVLEEYGVKLLGTTLEA IKQAEDRELFKEAMKEINQPVPESDIFNDLEEAVAFANRIGYPIIIRPAYTLGGTGGGIA HNEDEMYEITRRGLKLSPIHQILAERSVAGWKEIEYEVMRDSADNCIIVCNMENIDPVGV HTGDSIVVAPSQTLNDIQYQMLRTASVEIIRYLKIEGGCNVQYALNPNSNEYIVIEVNPR VSRSSALASKATGYPIAKVAAKIAVGMTLDQITNAVTGETKACFEPTLDYVVTKFPRWPF EKFNLADRTLGTQMKATGEVMAIDRSLEGSLLKAIRSLEIGLDHIELKKIAHESMEQLIE RLHLVDDERIYVVAEALRKGISVEKIHYITKIDTFFIEKIKNIVTVEKALAEQGLTEDVL RKAKRYSFTDSVIARYANTTVEDVRAKRKEWNILPTYKYVDTCAAEFESKTPYYYSAYAQ EDEVRPLGEKSVVVLGSGPIRIGQGVEFDYCSVHSSWALRKAGYQSIMINNNPETVSTDF DISDSLYFEPLTVDDVMEIINKEQPAGVIAQFGGQTAINLAGPLAERGVKILGTSVDSID MAEDRERFDELLAKLGIPRPVGALVTSDEEAQEAAKKLKYPLIVRPSYVLGGRAMEIVYN DKELDVYMKEAVVASKEHPVLIDRYMVGMEVEVDAISDGTDVCIPGIMEQIERAGVHSGD SMAVYPAQHLSQELIDQIVDYTRRIAVGLNVKGVLNIQYIVADGELNVIEVNPRSSRTVP FISKVTGINMVECATRIALGESLKDLSLPLGLVPNKPYVAVKAPVFSFSKMGLVEIALGP EMKSTGEVMGIGRTYSEALFKAINGANMRIPEDGTILMTVADRDKEEASQLAKGFIDLGY HIEATGGTGKYFKEHGVDCKVVNKISEGDDNCADHIRQDKVDLVLNTLTAGKRPEREGFQ LRRLAVEMGTPCLTSLDTAREVLRVVANRKDDANYTVEALQDFELE >gi|292596530|gb|ADCV01000018.1| GENE 37 32672 - 33739 1281 355 aa, chain - ## HITS:1 COG:BS_pyrAA KEGG:ns NR:ns ## COG: BS_pyrAA COG0505 # Protein_GI_number: 16078615 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Bacillus subtilis # 1 351 1 350 364 368 50.0 1e-101 MKGKLVLEDGSVFEGSLLGGAPTVGEVVFNTGMTGYQEILTDPSYADQIITLTYPLIGNY GTLNSITQGPKPYCKGFIVGELCDFPSNWQNEGLFSEYLRLHGIPCLYDVDTRAITRVLR NHGVMKGVLVRSDYPMEDIQKLFKQDLPTDQVMRVTTKWQGMRGDKNAEFHVAVMDYGVK ENILRSLEAAGCRLTVFPADAKAEDVLAANPDGIFLSNGPGDPQDLGYAVEEVKKMFGKK PIFGICMGHQVLAQAYGGTTFKLKFGHRGSNHPVQDLRTGRVYITSQNHGYAVDDTSLPD FVEITHRSVNDGTVEGMRHKELPIFSVQYHPEASPGPTDNLYLFDEFEDLMRKGK >gi|292596530|gb|ADCV01000018.1| GENE 38 33739 - 35025 1608 428 aa, chain - ## HITS:1 COG:aq_806 KEGG:ns NR:ns ## COG: aq_806 COG0044 # Protein_GI_number: 15606174 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Aquifex aeolicus # 1 424 2 422 422 332 40.0 1e-90 MSLLIKNGTVVNPAKKQNEVADVLVKDGKIAAIGQNLSAEGAEVYDATGLIVAPGLIDIH THLREPGQEAKEDFHSGTQAAAAGGFTRVVTMANTNPVVDNAALVRGLQKQAELTGVVKV EFIGAVSKGLEGKELAEMGDMAEAGVVAFSDDGHYVENAAFMRRALEYSSMFNKMVIDHA EDITLTKNGHMHEGIVSYELGVIGRPAVAEDLAVARDILLSEMTGGHIHIAHVSSKNTVD MVRRAKAKGLNVTCEVTSQHLSFTDEYLREYNPAFKMAPPIRSEDHRQALLEGLKDGTID AIITDHAPHAYEEKDHEFCCAPNGFSGLETSLAAVITNAYGPDKLSIDQVVYYMSTRPAE LMHLDAGVLEVGKPADITVFSTTEEWTVDRNKFYTKGKVSPFDGMTVTGKAKLTVVDGKI VMKEGVVL >gi|292596530|gb|ADCV01000018.1| GENE 39 35009 - 35959 987 316 aa, chain - ## HITS:1 COG:mlr0686 KEGG:ns NR:ns ## COG: mlr0686 COG0540 # Protein_GI_number: 13470872 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Mesorhizobium loti # 9 302 13 306 326 281 51.0 8e-76 MGQVSLKGKDLLGLQNVSPEEIKLILDVAKKMKKIVLSDDKKVPLLKGKSIINLFMEPST RTRSSFELAGKYLGADVINLSPSGSSMGKGESFRDTLLTMSYMGTDAIVMRHSAEGAPLY ATKAVDPIIINAGDGAHEHPTQALLDMYSILEKKKSIEGLKVVILGDIMHSRVARSNIYG LTKMGADVHLAGPRTMVYPEFEKLGVTVHHDIREAVADADVVNVLRIQLERIHSALYPTN REYARIFGINNDVLKLAKDDVMVMHPGPMNRGLEIAPDVAYSDQSVIQEQVRNGVAVRMA VLYLTIIGGDGSELAY >gi|292596530|gb|ADCV01000018.1| GENE 40 36101 - 36199 73 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQWSLVPYMHFFIYCTESTFESQCKTQNSYGF >gi|292596530|gb|ADCV01000018.1| GENE 41 36309 - 39374 4271 1021 aa, chain - ## HITS:1 COG:NMA0905 KEGG:ns NR:ns ## COG: NMA0905 COG3468 # Protein_GI_number: 15793871 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis Z2491 # 497 908 964 1385 1773 120 31.0 2e-26 MFSYKSKYCVAAAMAAMAALTGHVEARDIDLQSIGYFQFSPLPPSLVSQTDTLLLSDSPE YVGPVGGTLSAGTINGNGRIYFYHVNEMDQPHKIAIVLENQTAYPNTVHVMRQLKSVATP DYFAAGRDLSRKDLEHPLDESPNARPLYSLSIPPQGRQLIFTDLENTPVYQDALFTGIVD IKTEAPIFARVMMLPMGMDAVDASHWAKNLPIDEIQLRGTYTGSKRNMEVTTPFDTALGG AFVEVGNDREDAFINGVDEMQNKAFVRDRGNYGVSYTLKIPTKGNEPFRLYFNPLGGPYS GSFTVKALHQQGARRGQTDTRTYHIGGADGITALGDGTILDSRLMGNYNAGDLLTLNFMP AGASNLPIRFLLIPESLANPQKHQTIAVNVPKDVKDSLGHPTQSGTQIPVGPINGKDTNK GTVDTSKSTMTPAKQAETIAHEETKKLSVKAAADAKKEAQLKKAKDAEEALARKKAEEAR IAAEKAELARKAAEAKHAEVERKLAEKAEANRKAAELKAAQEAQAAKEKAALEAKKAEEM RQAEEAKRLEAERKAELDRKVAEARKAEEERKAEMARIEAARKAEEARQAAEAKARFEAQ RAAEKAALEAKKAEEERLAAEAKARLEAQRKAEQEALEARRAEEARKAAEAKAALEAQRA AEQAALEAKRQEDARRAAEAKAALEAQQMEAARKAEEARRAEEARRAEEARIEAERKAEA ARVAAEAKRAEEARKAEAARIEAARKAEQARLEAEARRAEEARKAEAARLEAQRRAEQER LEAARRAEEARIAAEAKRAEEVRRAEEARRIEEARRAEEARKAEAARIAAEARKAEQERL AAERAEAERQAAEARRLAEERYKAQLEAERKAEAARQQALAQAEIERKAKERAEAIQRVR DQQESARRRAELARQQLEAERKAAQASKRTPSFSELDDIHGDTSNVTIPNAVSIDELTKP RPTASQNTRRREQRQPQLSPNQQYVQIDPVANEPQQDQMPYTPQNEQQNDEENPPRLYPL G >gi|292596530|gb|ADCV01000018.1| GENE 42 39387 - 40334 1106 315 aa, chain - ## HITS:1 COG:CAC0513 KEGG:ns NR:ns ## COG: CAC0513 COG1481 # Protein_GI_number: 15893804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 304 1 309 317 241 39.0 2e-63 MSFAEDVKNELCQYESSSDADLAMKIEASCLLRMGGSIILGMKGAVGIRLATANNAVARR LLGILKKQYELPTNVLVRQGLNLRKKNMYTLSVEPSIEGRKALEDLALWPVTEQIPRSWL KSMEARRAFLRGAFLGGGSVNKPQSDYHLEFMTGNENFAKEIIHVLRLFHIHAGLTERKE EYVVYLKEGDAVTNCLQIMGAQSALMEFENVRIMKTVRNQINRQVNCETANLQKVVDAAV RQVKAIRIIDREIGIDELPEKLRIVARLRWDNPEASLKELEELMDGELSKSGIGHRLKKI EALALTYDPMGLEEI >gi|292596530|gb|ADCV01000018.1| GENE 43 40350 - 41696 1371 448 aa, chain - ## HITS:1 COG:sll0154 KEGG:ns NR:ns ## COG: sll0154 COG0391 # Protein_GI_number: 16331280 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Synechocystis # 4 424 37 456 462 370 44.0 1e-102 MRKRWFRWLIPGLNIKRWLALFSCGVGLLIIGISLMFNYQWLAVLEDIVLAFSYNMTGFY NYNVLIAVGVVVLSIGAVLMLIGTSKVIKTIIRAVLPNPDSKVSDIIFQNIRLDKGPKIV VIGGGTGLSNLLRGLKIHTSNLSAIVTVADDGGSSGRLRKDFKMIAPGDLRNCLIALAEQ EGVMENLFRYRFEGENELSGHSFGNLFITALAQVYDGDVEEALEAASKLLRVRGRVIPSS TEFIKLVAEMTDGTIVEGESNIPNSGKRIRHMYSEPAQPKPEGAALRAIDEADVIIFGPG SLYTSIIPNLLTDKIASHVRASKANKIYIANVMTQPGETSGYTLSDHVEALIAHGGEGIV DTVLANDGPLPIQMVEQYSAVGSEPVVLDTKKLQAKGIRTIRATLISPKKPAVHDPERLG KVIMDIVHAMQSDTEPHILEYYLQRDDH >gi|292596530|gb|ADCV01000018.1| GENE 44 41712 - 42626 870 304 aa, chain - ## HITS:1 COG:CAC0511 KEGG:ns NR:ns ## COG: CAC0511 COG1660 # Protein_GI_number: 15893802 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Clostridium acetobutylicum # 5 295 2 288 294 311 50.0 1e-84 MEAFRLLIVTGMSGAGKTQVLQALEDMGYLCIDNIPPILIPKLSEICRQGGERTNRVALV VDIRGGEFFEALSSSLETLREMKVDYEIVFMDATDETLIRRYKESRRSHPLAPDGMITTG LKEERQILNSVRHKADFIIDTTNMKTASLKEYLKTRFTQVDEGHGMSITVVSFGFKYGLP LDADMVWDVRFLPNPFYIPDFRHKTGRVKAVNEYIHSFEVTEEFKKRYFDTIDFLVPNYE QEGKSQFIVAVGCTGGMHRSVAMAEALYSHLLENGYRVSVEHRDMMKNNVEEDYNPHEIK TLGN >gi|292596530|gb|ADCV01000018.1| GENE 45 42639 - 43451 734 270 aa, chain - ## HITS:1 COG:sll1524 KEGG:ns NR:ns ## COG: sll1524 COG0561 # Protein_GI_number: 16331052 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Synechocystis # 8 267 3 269 279 103 28.0 4e-22 MNPSFSHIKMVAIDCDETLVRSDNTVSAYTVDVLHRLQQKGIGIIIATGRMYQTAKPIGL ALQLGNVPMILFSGGLIQELETGYKLFEQTVPIDVVHRVFQLGQQYSWHIQSYVDDHLLC HHKNWQSDHYEQQTGAVAEFLGDTIYTLSSEPNKLIAIDTKEGIDIIIDILTPLVGNQVT LVRSQRDFLEITAPNVSKGRALARLALDNNLSFENIVSFGNAENDISMLSETGYSVAVSN ATEHVKSVANEVCGHHNEDGVAHWIEKNLL >gi|292596530|gb|ADCV01000018.1| GENE 46 43826 - 43957 100 43 aa, chain - ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 1 43 111 153 157 59 60.0 1e-09 MDTVGRYEGAIKEYIRNQLQEDIAQDTLNFKEYTDPFTGEPVK >gi|292596530|gb|ADCV01000018.1| GENE 47 44486 - 45775 1794 429 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0557 NR:ns ## KEGG: Vpar_0557 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 429 1 401 401 534 71.0 1e-150 MKKQFAAIFAATAVLGVTTAFAANPFSDVTPDSWAYQAVSQLANAGIVNGYPDGTFKGQN NITRYEMAQMVAKAMANQDRANAEQQAMINRLADEFSNELNNLGVRVARLEDRVGNVKVT GDTRIKWEDQEHASSKTDARARIQFNAKVNDRTDAVVRVKGAYEFGDASKSSTVTMDRAY VNHKFGERVSAKAGRFGQIFGAGLAYDAQFDGAQFNAGNDKIGFQAAYGYLTSSNLMTAS HTPAGATAATTTVEKDANAEVVYLGLNGKLGKHADLGGFYARFNGSKELGVSEDNGGSDK LNKFKNVYGFNANTNFDKVWVGGEWVKASNIEDSTAWTAGVGFGDYSIAKKGSWGVKGQY FNAKENAPVLDSTWNHKYIQNAKGWMASVDYALQSNVGLSAYYGFDWKTADSAKTDKADF YRAELNYKF >gi|292596530|gb|ADCV01000018.1| GENE 48 46383 - 47645 1833 420 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0555 NR:ns ## KEGG: Vpar_0555 # Name: not_defined # Def: S-layer domain protein # Organism: V.parvula # Pathway: not_defined # 1 420 1 420 420 678 92.0 0 MKKQFATIFAATAVLGVTTAFAANPFSDVTPDSWAYQAVSQLAQSGIVNGYPDGTFKGQN NITRYEMAQMVAKAMANQDRANAEQQAMINRLADEFSNELNSLGVRVSRLEDRVGNVKVT GDARIRYQGSEDKGVYKTNSKSLTDGRARVQFNGKVNDKTEAVVRVKGNYEFGDSTKGAD ATIDRAYVDHKFGNSVSAKGGRFQQTIGGGLMYDDTFDGAQLNVGNDKVQVQGAYGYMMA GAADGNSKSDNPSVAYVGVKGKVGQESTVGGFYSKLSSGNLNHNGSTVNSDSQDVYGFNA DLRKDKVWVGGEWLKASNVNDSQAWTAGVGYGNYDIAKKGTWDVKGQYFNQKANAPIVSS TWDQAYDLTNTSNGYKGYMASVNYAVQDNVGLSAGYGFNSKDQKGNDLSDFYRAELNYKF >gi|292596530|gb|ADCV01000018.1| GENE 49 48259 - 48831 561 190 aa, chain - ## HITS:1 COG:BS_sipT KEGG:ns NR:ns ## COG: BS_sipT COG0681 # Protein_GI_number: 16078505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 2 184 13 177 193 95 32.0 6e-20 MSNKIVKEILDWIYAIVLALIIAMVIHIFLIQPTRVSGESMEDTLHNGQYLIVTKWHHIM NEMPNYGQIVIIDSRVNRARTWVDDVEEPLMNYASVFNKAAQTNDVWVKRVIGRPGDVLE FKDGHVWRNGEQLQEPYTKDTIMNYTRSTPVTVPEGHVFVMGDNRNHSSDSRFIGPVPVD HVLGFVSYAI >gi|292596530|gb|ADCV01000018.1| GENE 50 48841 - 49710 971 289 aa, chain - ## HITS:1 COG:CAC1325 KEGG:ns NR:ns ## COG: CAC1325 COG1284 # Protein_GI_number: 15894605 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 13 286 11 281 285 262 53.0 5e-70 MKNETLTHNWSNFIMRCLMMILGALIYTIGLDLFLVPNSIIDGGVVGISLMAAELSGISF SIFVVLFNLPFLYIGYRANGKNFTFSTLFSIVWMAIFSTFAHDFTPITTDPFLGSIFGGI ILGIGVGLIIRNGGSLDGSEIVAIIFDRRSTFSVGEIVMAMNLIILGAAGFVYSWNSAMY SLIAYFIAYKMIDITITGLDESKGVMIITDAENSKNLADALNANLNRGVTIMYGEGGYLK QPKHVLYSVVTRLEIMRLKNTVYEVDPSAFITIQDVHDVFGGRFTKNGH >gi|292596530|gb|ADCV01000018.1| GENE 51 49700 - 50227 578 175 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0552 NR:ns ## KEGG: Vpar_0552 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 175 1 175 175 300 82.0 1e-80 MTDTTYILAVDPGNEKTGVAIVTPSGTMVCRKIIMTKQFNGEIERILTEYYGIVHMVCGN GTNHKYLYPSLQQIGRNHKITTSLIDESHSTEEARKLYWKYNPPTGWRKIIPTSMQFPPE PVDDLTAFVIGLRYTKQLSQAVNDIQGDTMDASELEEKRLHAMEQLYGKGEVHEK >gi|292596530|gb|ADCV01000018.1| GENE 52 50342 - 51556 1431 404 aa, chain - ## HITS:1 COG:alr4393 KEGG:ns NR:ns ## COG: alr4393 COG4372 # Protein_GI_number: 17231885 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria with the myosin-like domain # Organism: Nostoc sp. PCC 7120 # 1 186 1 193 496 98 32.0 2e-20 MLVGVKILVIIALMGGLIAYMGDKLGTKVGKRRMSLFGLRPKHTSIIVTIVTGLLVAAAT VGVLTITSQSVRTALFGMDQLRADMKQLNDEVAAKTQELIRGQALLEQNKQELAERMAEI EQIRKEVDATKAELASAQAAKDATEAELATLQASYDEVSKKLADLEATRAKMEAHIKDLQ TTQEQLQNGIIHLREGTILFQVDQLLAQAVVRPGLSEEDSNAAIKNIIDDTNKLVLRRLG IEDQGQAVVYVDRQNIEVATQKLNSAKTPMVVQVVAAGNIIAGEPAVAVIQVYPQQFIYK NGEVIHSAIMDGGPNAQSAMLQFLKQVNEKAREKGIIPDSLSGDIGTIPGDDLFTAIRRI ATIHGKVHVEAYVDGDTYSSGPVHLKLRITQMPVFNDKAKMPAY >gi|292596530|gb|ADCV01000018.1| GENE 53 51644 - 52735 1172 363 aa, chain - ## HITS:1 COG:slr0882 KEGG:ns NR:ns ## COG: slr0882 COG0795 # Protein_GI_number: 16330198 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Synechocystis # 1 357 20 386 394 204 32.0 2e-52 MRLLDKYILKAFVGPFLFGVFAFTSIFIGTGTLFRIAQYITEYGAPLVLVMKAFVLALPS IVILTFPMSVLLASLMTFSRLSSTSEIVVMRAGGLSFLRLAMPVYIIALIISIGAVAFNE FVVPRTNNMYQTIVREQIMKNASPQTQNHIVLKTMNGNDLGTLMYAKSYNAETKKLSMIT VQQFGEGGKLQQVENADTAVWNGQYWVMQNGIIYDISAGDGVERTMKFKEQSLPIKSAPK DIQQDQRKPEELTIKELRHQIKAYKAAYTNANKLEMEMYQRFTIPLASFVFALVGAPLGL QKQRSSSSISFGISILIIFIYYGVMTFAGALGKGGALPTVFAALIPDTLGIIAGLYLNWR VSK >gi|292596530|gb|ADCV01000018.1| GENE 54 52745 - 53464 246 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 3 235 5 235 305 99 30 8e-20 MYIETKNLVKTFSGRNVVDGVSLRVDKGQVVGLLGPNGAGKTTSFYMIVGIERPSSGIIT VDGKDITNIPMYKRAAEGIGYLPQEASIFRSMTVEDNIRAMLQTTSKKSDEIEAIVESLI EEFHIGHVRDRMGMQLSGGERRRVEIARCLALEPNFILLDEPFAGVDPIAVADIQQIILH VKNRGIGILITDHNVRETLGIVDKAYILSSGKILLEGTPEEIANDPIAREHYLGDNFRL >gi|292596530|gb|ADCV01000018.1| GENE 55 53474 - 54193 966 239 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0548 NR:ns ## KEGG: Vpar_0548 # Name: not_defined # Def: OstA family protein # Organism: V.parvula # Pathway: not_defined # 1 239 1 239 239 407 98.0 1e-112 MNKKKQIGMAILAVLMTASVTVWAANDPLTISADTLSYDGNSGRADATGNVVITQADKTM TGAKGWYNTKTQEANLDGGVSMIGSDMAMSAQTVHSYNNNKFTANGSVHLQRADRQIFGD SVEYSTDSEYGLVTGNARLIAEGTTLTGDKVEGWMKEVRAVAQGNVTFSNPERNVSGSAD RATYTQTPNQNDGVVLLSGSAHAVQNGNVLNAPELKIRLADDSAETLGGRSTLIIVPNQ >gi|292596530|gb|ADCV01000018.1| GENE 56 54209 - 54745 664 178 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0547 NR:ns ## KEGG: Vpar_0547 # Name: not_defined # Def: protein of unknown function DUF1239 # Organism: V.parvula # Pathway: not_defined # 1 178 1 178 178 304 100.0 7e-82 MKNNKKLIAIVVAIVLALIGLIVFIMKDSNEANSTQNQSGQLVNFQGADLQEEKDGKLVW ALSAEKIEYDPRTKAIVLTNLKGLFYQDDVTTTITAPHAVLTGDRNSLDIDQGVTATNTE GAEFKTEALHFDNKTKTLTSKTAFTYNSKDVTLTGDKLEGNMSLKIIKAIGHAKLTKK >gi|292596530|gb|ADCV01000018.1| GENE 57 54732 - 55664 993 310 aa, chain - ## HITS:1 COG:RP718 KEGG:ns NR:ns ## COG: RP718 COG1560 # Protein_GI_number: 15604555 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Rickettsia prowazekii # 61 286 66 288 290 114 28.0 3e-25 MNNEWQYHLVKGISWLVCRLPYKLILLIGACLGPVYGLIAKKQKLRGINNIKIGMNMNDQ EAEQLINKLFKNLGRSVMEVLYMPNLTKSFINKHIEMRGVEHLEKAIAEDKGVIVLTGHV GNWEWMGAAMAAHGYPSTTIVKKQPNAQFTRLMNEYREMVGLDVFASGGNEIVSAAKALK KKKLLGFLADQDGYINGLPVPFLGQDSSAVMGPATFAKKFGSPVVPIFASRKPEGGHIVH ILPALHYEETGDEDVDMYRLTEACVRVTEEFIREHPDEWLWFQHRWMTKMDQIIDYDKKI AIRERAHEKQ >gi|292596530|gb|ADCV01000018.1| GENE 58 55679 - 56200 471 173 aa, chain - ## HITS:1 COG:FN0213 KEGG:ns NR:ns ## COG: FN0213 COG1778 # Protein_GI_number: 19703558 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Fusobacterium nucleatum # 2 167 3 168 168 149 45.0 2e-36 MNIQWIVLDVDGVLSDGTLFYTSTGEELKAFSVKDGLGLTAARKSGIKLAIITARVSPMV EHRAKELHFDELLMGYANKTEALRTLCKKYQIDLDSVAYMGDDLNDLGALQLVGLPMAPN NAVLEVKSIAKFISTVNGGHGAVREAVEYILKNQGLWDSVVADYAREAHAHGQ >gi|292596530|gb|ADCV01000018.1| GENE 59 56200 - 57171 1063 323 aa, chain - ## HITS:1 COG:NMB0352_1 KEGG:ns NR:ns ## COG: NMB0352_1 COG0794 # Protein_GI_number: 15676267 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Neisseria meningitidis MC58 # 4 202 8 206 207 247 60.0 2e-65 MTILEQAAQVLHEEARAIEELSSRLDHNFVNAVNMILACKGRVVCTGMGKSGHIGRKIAA TLASTGTPALFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKLICV VGKPESTLAKNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTPENF AVFHPGGSLGRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDEEGHL LGLVTDGDVRRGLDSGSNFLEWPVEDMMTSMPRTITKDKLAAEALHLMEKNQPRPITVLP VVDTNNVCLGIVHITDLLRRGIV >gi|292596530|gb|ADCV01000018.1| GENE 60 57183 - 58001 1107 272 aa, chain - ## HITS:1 COG:FN1224 KEGG:ns NR:ns ## COG: FN1224 COG2877 # Protein_GI_number: 19704559 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Fusobacterium nucleatum # 4 272 17 285 286 346 61.0 2e-95 MKTVQIKDITVGGGKGLFVLAGPCVIEDYDRTLAIGKRAKEICERLGVPYIFKASFDKAN RSSFSSFRGPGLEEGLKMLASIKKELNVPVVSDIHSIEQIEPAAEVLDILQIPAFLCRQT DLVYGAAKTGKCVNVKKGQFMAPKDMENVLNKMKETGNENLMLTERGFSFGYNNLVVDMR SFPIMRSFDYPVIFDATHSVQLPGGAGTKSSGNREFVPNLARAAVASGVDGLFFEVHDNP EEALSDGPNMLYLDQFEDVLRDLVAIDKIVKG >gi|292596530|gb|ADCV01000018.1| GENE 61 58002 - 58733 718 243 aa, chain - ## HITS:1 COG:FN0807 KEGG:ns NR:ns ## COG: FN0807 COG1212 # Protein_GI_number: 19704142 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Fusobacterium nucleatum # 1 243 1 244 245 231 51.0 6e-61 MKFGCVIPARYGSTRLPGKPLADIAGKPMIERVYARVSQATKTVCTIVATDDNRVYSAVQ QFGGTVMMTDPNHPTGTDRLAEVASHYTDLDVVINVQGDEPMIDPNLIDDLARLFEEDPN LQMATVATPLLEEEYEEPSAVKVILNNRNDAMYFSRSLIPYPRHDFVRPPLKHIGIYAYR REFLLNYAKMEPTPAEQTESLEQLRALENGYTIRVILTNKRFIGVDTPEDLARVNAIYEQ EEK >gi|292596530|gb|ADCV01000018.1| GENE 62 58778 - 59890 1126 370 aa, chain - ## HITS:1 COG:FN1130 KEGG:ns NR:ns ## COG: FN1130 COG1663 # Protein_GI_number: 19704465 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Fusobacterium nucleatum # 39 346 4 307 325 174 36.0 3e-43 MSGEALFKSIVSGEDQSVLGDIARSSLGLLSKGYEKAVSIRNARFDEGKGVTKVTVPVIS VGNITAGGTGKTPMVRFICDVLTQKGLHPTVLSRGYRAEDNNKNIIISKDGTMLVEPSIS GDEAWLLAKVLQKSNVIIGRERSKSAEIAINELGADCLIMDDGFQHRALARDIDIVLIDA SNPFGYEHVLPRGLLREPLSGLQRADIIVLTKVDQVAPGIVSGIRKRLTQMIPNIPVYET THKPQFMYTLDEWANGSVGASVDAYKEQRIMAVSGIGNPQSFTQTLTDVGYNVVHTLPFG DHHDFSNDDVVEIWKQAFAHQADAICITEKDAVKLSQLHAIEDLKIPILVLSIGIEFVSG KQEFIENLEI >gi|292596530|gb|ADCV01000018.1| GENE 63 59945 - 61249 1266 434 aa, chain - ## HITS:1 COG:PA4988 KEGG:ns NR:ns ## COG: PA4988 COG1519 # Protein_GI_number: 15600181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Pseudomonas aeruginosa # 54 415 50 409 425 234 35.0 2e-61 MYWIYNVLLIFYWIGLIPVILYRLAFEDGFYERIKQSAGYMPASLLKKIEGRRAIWIHAA SVGEIVATSPLVKEVKKEFPEAVVVVSVVTATGHAMAHRIIPEAEGIIFFPLDLPYLTRK ILHIIKPITILLVETEIWPNFLRIAESENIPVMMVNGRISDRSMKRYKYISAFTREMLRS IERFCMQSKFDAAYIESLGAHTPDITVTGNMKYDQTYATVSYEEKQALLDEFGFGNNHPI IIAGSTHKGEEEAIFETFKQVLKEYPQARLLIAPREIYRGHDVQNIAKRYELSAICRSDM KEPVHEGIPVVVLDTIGELGRLYSLGDIIFVGGSLVKTGGHNILEPAAHGKPILVGPHMF NFKEIFALLNSRNACEQVKNGKELTTMVLRLCKDRDLAKKMGQNCLDIIKENRGATRRNT QELRLLFEKHQIIP >gi|292596530|gb|ADCV01000018.1| GENE 64 61252 - 62982 243 576 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 335 557 9 228 309 98 31 2e-19 MNSYSRLLYFVKPYYKRMLFAVFCMIVAAAAYLVVPWLIKNVVDQVLDEKNMFMLNLIVG AIILIFLIRGFATYGQTYNMSYIGQRVIIDVREAIFNHLQKLSLSYFDRRKTGVIMSNLT NDVAALQTAVVDNLISFITESVTLIGSLVSMLLIDWKLTLVTFITVPVVLVIINVFGKKL RVAGHDVQGRVADITALLQEVISAVRVVKSFAREDFERKRFEDENDRNFKAVIKATKLTS LLSPMVEFSAAIAVAVILWYGGYSVVTGAITAGSLIAFLIYAINLSNPVKRLSQVYGNIQ KALAAADRVFEILDTKTDVVEKPDAITLPAITGNVEFNDVSFSYDGEKTALENFTLSVKA GESVALVGPSGAGKTTLANLLPRFYDVTGGSITIDGYDIKDVTFKSLREQIGLVPQETVL FNATIKENILYGRLDATDEDVYEAAKAANVLEFVEKMPDGLDTIVGERGSSLSGGQRQRV AIARAILKDPRILILDEATSALDTESEKLVQEALDRLMKGRTAFVIAHRLSTVQNAHQIV VLNQGRLVEQGTHQELLAVDGGLYNHLYSVQFSNKG >gi|292596530|gb|ADCV01000018.1| GENE 65 62975 - 64117 1262 380 aa, chain - ## HITS:1 COG:NMA0069 KEGG:ns NR:ns ## COG: NMA0069 COG0763 # Protein_GI_number: 15793098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Neisseria meningitidis Z2491 # 3 351 9 360 384 219 33.0 6e-57 MKVMFSAGEASGDTHAASVANALREIDPSVEMFGMGGTLMERAGVRIVYDIKNLGVIGIV EIVKSLPKFFKLRTYLKRVMMKEKPDILVCVDYPGFNMKLAAVAHELGIPVLYYIAPTIW AWHSSRGNTIRKYVTKVASIFPFEAEAYRKYKCNVDFVGHPLLDIVHPTMTKDVAEAYFG ARKEAKKILLMPGSRKQEVLSLLDTMLKSGEQLMAKHEDIQFFLPRAHTIDRSELEEFID VHKVPVTITEDHTYDLMQICDVCLAASGTATLETAMMELPTVLLYRVSPITYGIGKMVVN VTHVGLPNIVAGKEVIPELLQDAVTPDAIVSLVEPLLSDVDKNEAMRSELREVRHKLGEP GAVKRVAHLVYNLGKEKCNE >gi|292596530|gb|ADCV01000018.1| GENE 66 64117 - 64953 1174 278 aa, chain - ## HITS:1 COG:aq_1276 KEGG:ns NR:ns ## COG: aq_1276 COG3494 # Protein_GI_number: 15606496 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Aquifex aeolicus # 3 270 43 304 305 162 38.0 9e-40 MAKVGLIAGIGVLPVEFMRAAHVLGHEVVVIGVVPDVDPALKAEADAFYDIGVAKLGKIF KTLKKEEVQELTMLGKVTKEILFKGLTFPDLKTLGVLKRLKNRKDDTIMLAIVDEIEREG FKVLDQTAYLKPFMPKVGVLSKAQPTDEQWADICFGFELAKQMGALDIGQTVVVKHKAAM AIEAIEGTDKCILRGGELGRGDAVVVKTEKPNQDVRFDVPAVGIKTLMSMIDSGCKVLAV EAEKTIFVQQQDVLDMADRHGIVICAVDQEFVNSRKDA >gi|292596530|gb|ADCV01000018.1| GENE 67 65321 - 66133 897 270 aa, chain - ## HITS:1 COG:sll0379 KEGG:ns NR:ns ## COG: sll0379 COG1043 # Protein_GI_number: 16331593 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Synechocystis # 4 240 26 262 295 239 51.0 3e-63 MIVVGMENAESNIHSTAIVHPNAKLGKDVIVGPGAVIGEHVEIGEGTQIGAHVVIGGWTT IGKRCEIYPNASIGLEPQDLKFKGEKSYCNIGDETVIREFVTISRATGEGEETRVGNNCL LQACTHVAHNCIVGNNVIMSNCAGLAGHAIVEDRVVIGGLAGIHQFVKIGRNAMVGGMAK VVQDIPPYVIADGQPARVIGLNSVGLSRAGISEEVRRDLKQAFRIIYRSGFSLSKAIEEM EMQLDSSVEIENLLRFLRNADRGIMRTRRD >gi|292596530|gb|ADCV01000018.1| GENE 68 66153 - 66578 706 141 aa, chain - ## HITS:1 COG:BH3735 KEGG:ns NR:ns ## COG: BH3735 COG0764 # Protein_GI_number: 15616297 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Bacillus halodurans # 2 140 1 139 140 160 58.0 9e-40 MILNHEDILEILPHRYPMLLVDRIVELEPMKRAVGIKNATFNELFFQGHFPGNPVMPGVL LTEAIAQVGGIALLYPEENRGLTPMFTGIDKVRFRHPVKPGDQVRMEVDIVKIKGKMGKV EGRAYVGDKLCASGEYMFALV >gi|292596530|gb|ADCV01000018.1| GENE 69 66575 - 67414 791 279 aa, chain - ## HITS:1 COG:PM0148 KEGG:ns NR:ns ## COG: PM0148 COG0774 # Protein_GI_number: 15602013 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Pasteurella multocida # 5 271 4 276 305 226 43.0 5e-59 MSKPQQTIKQAISYQGIGLHSGEPVNMVFKPAPENTGIVFIRTDIEGHPSVRAHIDNVTN TMRATTLENGEAKVFTVEHVMAAFSAMNIDNCYIEMDSPEPAVGDGSSAIFVGLIEEAGI QEQTAPRHVYKITRSHTIYDGDRFIVILPYDGYRITFTSVNSHPLLGTQNCDFEVSPEYF KEHISAARTIGFMKELEQLQAMGLAKGGTLDNALVYDDEKCLSVPRFDDELVRHKALDVV GDLFLLGRIEGHVIAMKSSHELNSKLARSIMEEIRETQP >gi|292596530|gb|ADCV01000018.1| GENE 70 67607 - 67684 67 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLVGISFILKIPQSHKQNLFKIINY >gi|292596530|gb|ADCV01000018.1| GENE 71 67678 - 68580 989 300 aa, chain - ## HITS:1 COG:NMB1418 KEGG:ns NR:ns ## COG: NMB1418 COG1560 # Protein_GI_number: 15677277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Neisseria meningitidis MC58 # 14 282 13 279 289 99 30.0 1e-20 MYRFMKIFSAFICLLPKGLQYAIGTLLGEIAWLVVPPKRKRLAIGQILFCNITDDPKEAR RIAKASTTRFGRMIIDVLRYPEIKDGAYKDMVEFINREYLDDALENGRGAILAAVHSGNW ELLGGVLASEGYPLISVAMKQNGDADKFINEYRRIMHQHVTYKTGVREMINELKKGAFLG LIMDQDPGDDGVLVPFFGYETLTAAGPAVLARMQDVPIIFVTIHYSPFSEKYEIEAHPPI YVERTDDKKRDIAVTTTRLNEFIEDYIRRYPEDWFWLHNRWKWTRRFYGEQIDTPPDVFQ >gi|292596530|gb|ADCV01000018.1| GENE 72 68587 - 69618 1187 343 aa, chain - ## HITS:1 COG:FN1909 KEGG:ns NR:ns ## COG: FN1909 COG1044 # Protein_GI_number: 19705214 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Fusobacterium nucleatum # 1 332 1 331 332 207 36.0 2e-53 MEKTLQELANLVGGQLIGDESIVITETRSFEQAVKQSITFAIGEYVEHIALCQAGAVIVE SEVKNAPMAQIVVDNAKSAFAQVLEVFHPPVVVPREVHSTAIIGKNVTLGKNVAIGAYCV INDNAVIGDNVTIRPYVYIGHNVRIGEDSDIYAGAIVHENCILGKRVVLRAKAVIGGEGF GFATENGIHTHIPQVGNVILEDDVEIGSCTTIDNATMGSTLVRRGTKIDNLVHLGHNVEI GEDCFLIAQVGIAGSTKCGNHVIFAGQTGCTGHITIGDNVQFAGKTGITGNVPSNSVMAG YPMRPHKEWLKLAAYENRLPEMVKTVKQLQKEIDALKAQLKES >gi|292596530|gb|ADCV01000018.1| GENE 73 69650 - 70177 917 175 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0530 NR:ns ## KEGG: Vpar_0530 # Name: not_defined # Def: outer membrane chaperone Skp (OmpH) # Organism: V.parvula # Pathway: not_defined # 1 175 1 175 175 205 98.0 5e-52 MNKRIKSLVLSAALVASMAILGGCGSNNVGYVDSVKVANSTEKGIEITKEINAKKAELDA KIAAADEASKQNVFNQANQELNAFANAKAQEYRQYQEQKINELVKEKKLDVIIEKGAVVG GGSDVTDDLITKMGKASDDQIKEVENAAKAQEQQDAQQNAQQADQATTSTTEAAQ >gi|292596530|gb|ADCV01000018.1| GENE 74 70189 - 71160 949 323 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0529 NR:ns ## KEGG: Vpar_0529 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 323 1 323 323 500 97.0 1e-140 MNGKQRYIGLVIFLVAAISAMVWAYGFVTNRQQGPDGMSIGVVRIDDVLAFNPSYADYKQ AKNELELLQRQYELEQQALNAKSETQDEQLKTLALDSTLSDALTVELQTRIATKENELNQ QLNSKRNELTQKYLAELKVSTNEYDLEIVNLQLDLYAYDARVYIDDAQRAAAMAEKAKKE ERLKELLAKRKPSDFDVDSIKAKVQAELAPMQQKGQEELNQYAASLQKELAEKRDSMVQQ QAQAIIANNNLPVAQEWNDTWAKKLSDKEAEVSALHEAILEDVRMRVAIIAEEQHLDLVI IDDGGNIKGLDITDAVKASYRVQ >gi|292596530|gb|ADCV01000018.1| GENE 75 71190 - 71678 663 162 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0528 NR:ns ## KEGG: Vpar_0528 # Name: not_defined # Def: outer membrane chaperone Skp (OmpH) # Organism: V.parvula # Pathway: not_defined # 1 162 1 162 162 236 100.0 2e-61 MMRMMNNKANVKIFSIVIAAIFIVGIGALAYTQMASPSSNSGTSTIGVIDTSRMLSQDNP IYISAAQEYMSYQSQLQQETQAKIDAAQDDATKQKIAEEARQNLAKKDQEIAKSVQDKAM EAAKAVGDAKGLSVVMTKDTVLYGGVDITDQVLKKLATDAKK >gi|292596530|gb|ADCV01000018.1| GENE 76 71785 - 73953 3021 722 aa, chain - ## HITS:1 COG:slr1227 KEGG:ns NR:ns ## COG: slr1227 COG4775 # Protein_GI_number: 16330104 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Synechocystis # 146 722 250 861 861 181 28.0 5e-45 MFKPKAYKSMLAASVLTAVMGTGSVFAAEVQAGYTPDLNSTTTTNAATANDAATTQAVYN ADATTTTIQDETDAAILAARGDTTISSDGTVVKGSDGTVTVNNAALKTDDKQVKMVSKTT GGTDLDKAAENGQTQAVTTVEAQYVTSASAESVNPYVGKLITGLSISGVTAEQQANLLPI LTEKVGDTVSVDGVFKDVTNLGNTGYFSEVNPVFTSVPEGVKLDFAVTVNPVTTGVSFEG NTVYSSEVLTKFMDIQPGQVLNSVSVGQKVQGINAAYARDGYMLAHVDGIRVDDQGILHI HIVEGVVEDIIPAGNKKTRNKVITREFVQKKGKPFNKFLVRRSVERVYNLGFFDDVNVRM LPGEQDPNNVIIEIDVLEHKTGTITLGAGYSKSDGLMGIVEFGEDNLRGTGDKFKVHWEI GGKKKYKNYQISYLKPWIDSKGTSLGFSFFNREDEYTDYNEDGSEVAEYNKKSRGFNISF GRQTGEYTRDYLTLESRKDTYKWDDDDSSGFRYDKNAGKGTNWDNGSYNFASDNYVKNNF GRINSVTWQKVYDSRDNIYEPTRGRRISYTTQWAGHGLGGDFDFYKFTAEARMYKKLGAK NVLAFRARGGFIQGDAPYSQLFTLGGADSLRGYEDDQFRGKYMYNATLEFRFPIVKKVSG VLFTDIGDAWDAPNVTWYNSKKTFNYGVGAGVRITTPIGPVKLDYGVGKHKNKFHFSFGT QF >gi|292596530|gb|ADCV01000018.1| GENE 77 74130 - 78419 4102 1429 aa, chain - ## HITS:1 COG:SMc03096 KEGG:ns NR:ns ## COG: SMc03096 COG2911 # Protein_GI_number: 15966750 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Sinorhizobium meliloti # 1208 1409 1662 1849 1869 79 28.0 8e-14 MTRKKWLLIGAAILGLSSIVGASINPMAQTYIAPMVKEQVNNVINGSIDYDSLRINWNGD VVLTDVTIKDRDGHLVGTAQEVAVGVKLSSLPKIVGGNTSGATAISSVIVEAPDFHIWQL ADGSWSITKLVKPSDPNKSGTFDGSVTINDGRVALRTKDGIKRNVENLDGTMALDMSGMS KGAFTADVDGSAITLNGKIDMNNVSNFDLFVQADEIDTAGIMSFVPLRKDLSVTSGKLQD LHLNLKSEDGKYIMSGNVGFKGLTGTYKRGNTIYNITDGTGRIMLNNDQIVISRSSWRVN DQVTKINGLVTLGKDEEYLNLNVVADKVDLEAITDVGVSGIVGGRAHIGGTTVAPRVDAT IASDGISYNGYYIDRLQGDIVYDNGLVRTDDVRLSVGEGSAKVKGQYVVDTGDFDTTIKI QNLPLGTFTKDMISPVTGNIDGEMRILGKNNQVTDVVGSVKGRQIGIRGVVVDTAKANFT HADNSTNMTVVGTIGDGALSGYGYIQNGNIDATISGNALPLTALSLIIGQDVDGTLNTSF AIQGTLDNPNVMGTVWGQEVHYKGARFNNIHGDIKLDNHILTITNGHIGDGDGGYDVNGW YNLNTDVLDLNAKARAARIENVIRTVTDVPITGWFETDNHITGTAANPIIEGRAHLWDGS AYGKLVTNAFAKYNYQNDTLELYRFDIEGYGATITGGGTVSKEAINIDFEGKKIDMGRLL INTDYKVDGLLSGRGQITGSVDNPQFNGYISSDALSVNGELLNDIHGRVYADKSVVNVQD FTFAEADGGRYTAKGGMKFDDSRQLFGVLDVTNGSVKNLLTLLDRSNEHIDGKLNGSVEI GGTRDNPSVNVTGKINDVSIDEKIVGDATIDASLANRKFKVTTLKLPVDEGLIAIGGTMD LDGQADLQVALKDVDIVPFLPLMGKDIQATGWVTGVVNITGETKNPKVELSGAVESGSFN GVGIDEGFVLATMQDQVIQIQRIQGAKSGYKLSVYGKIPLAAIFTSGYIPANDSKSMDVT IDFNEADMAVIPLLTTSVKEATGPLKGTVHITGTIDQPEAYGTVSVRNGTMKLASVENQI TGIDGDLIFSGQQGDFQSRINMGKGSAGLAAKVNWSGHTLTNYKAAVQLEDLEVRSEYVR GPLNGELYIADRDGLPTLIGTLNLEKIQFKIPLSLQSSESTKDMGVDVTVHAGKGVRLYD RTLYNMFISGDVHFGGSLQNPTASGQFDVRNGTFKYLSHVFNITKGNAHFVGGSYLPNLQ LEAETNVSNYTIMLGVKGTVDHMDLSLSSNPTLSRKQIISMLTFGRGADSNSSTLTNEDV NAVATAGLQMFAFGYVQDALQNTLGLDRINITTGSIDPDEPTNRDTASNYNIEIGKYVLP RVMLTYSQGINNKQNKYGIEYSVKRNLKFTGWHTSKGNNYIGGRWTRSF >gi|292596530|gb|ADCV01000018.1| GENE 78 78599 - 80059 1842 486 aa, chain - ## HITS:1 COG:slr1270 KEGG:ns NR:ns ## COG: slr1270 COG1538 # Protein_GI_number: 16330863 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Synechocystis # 60 453 96 511 526 114 23.0 5e-25 MNKKVLSLGVMLSLVTTGAFAADVVTTSVNNGDQLSKYQKEAIQLTQKQLAEKSVLDSKT YERTLALNEARTVDLALANNRTAKQTKWGYEAAKSAVSQVAAGKNPSVSYGWSAQKTGGD TGSGKSGSHNFSISAPVFNPQLDASIDSARYTREGTGASYEEALQQSKYDALNGYYTLIM SRNMVDVAQQAVKDYQGHVTNVEAQYNVGLVASSDVLAAKTNLDDSQTSLVKAQNAANLA EANLNQVIAYPAQTAITTAEHDLQYKPYNVTLEQAKAYAMLHRSALVKSALDVKSAEEAV KSAKAGYLPTVAVKAGRGYGDPDGYFGTSTKSWSVGASATWNLWDGGATQNAIKKANAQL EQAKEANLATVDAVLLAVQKAYLNLRAAEQTIQSTQTAVAQGQESFRIATLRYRAGVGTN LDVLDAETKLTTARNNYVEALYNYNISIAALEQLTGVPLSTPVGQGAEVIANSGAVEQLS KLGGNQ >gi|292596530|gb|ADCV01000018.1| GENE 79 80102 - 81361 1153 419 aa, chain - ## HITS:1 COG:aq_494 KEGG:ns NR:ns ## COG: aq_494 COG1463 # Protein_GI_number: 15605967 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Aquifex aeolicus # 1 157 37 195 253 65 29.0 2e-10 MKWTMEAKVGAFTIIGIVLFIAGILFVGRIDIWAKPQMTITGDFTQVNGLKNGNQVKFSG VAIGTVSDIEITPRGVVVKMKLDEKTQIPSDSIFSLGSDGFLGDKFIQISPGQSKVYLQD GDSVKGEGVDAVDKAMQSAQKLMDGTEKMLQSINSIIGDPATQSALKYSLQSTAVMADNA VAITQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNLKQTTDRVDNMARTMESTVTDPK AQENIKETLHNTAQISARINKLMGGKAYQTDVNGKSVEVGMTEKKSSTKIEPSVDLLYNT TDNEFRVNGRVRAFNNKGMAEIGLSNIGDDTTFDLNAGRFISSKWLVRGGIFESELGLGV DYNLRGPVSLSAALYDLNHRKYRIRSDIRLHKDTYGVIQMTRPFSSTNGGTYFGIKQVF >gi|292596530|gb|ADCV01000018.1| GENE 80 81361 - 82119 371 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 240 245 147 36 3e-34 MIELRNVVVAYESRVILDSVNLTINDGETLVILGGSGSGKSTLLRLLIGLQRPTSGQIIV DGTDITTLSEDEFNTVRRKMGMVFQYSALFDSMSVGENVAFGLRQHTKLKDDEIKRIVAE RLDWVGLKGYESYMPNELSGGMKKRVSLARAIALDPSLILYDEPSSGLDPITSGTISMLI KGMQNRLGCTSIVVTHDMQSAFYVADRIALLDQGHFVEISDTIEFKNSTNKKVQQFIHGE AEPINESAMGDI >gi|292596530|gb|ADCV01000018.1| GENE 81 82141 - 82902 891 253 aa, chain - ## HITS:1 COG:slr1045 KEGG:ns NR:ns ## COG: slr1045 COG0767 # Protein_GI_number: 16329621 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Synechocystis # 35 253 36 254 263 176 45.0 4e-44 MSWLESIGRVVINGLSQMGSATLLVWQTIKQLKMINLWHVFQQMAHLGVDSLPIISLTLL FAGAVMTLQITDVLITYGAQSTVGGLMAVAMGRELGPILVGVVLAGRVGAAITAEIGTMK VTEQIDALRVMAVDPVGYLVVPRVVACMIMVPILAFYGVVIGIAGGYFVATVIKGLAPST YLDSIQMFSTISDFTLGLIKSSVFGAVIALVGAYKGMETKMGAEAVGFSTTSSVVTSIIL VFVLNYFLSTLLF >gi|292596530|gb|ADCV01000018.1| GENE 82 82933 - 84915 2378 660 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0521 NR:ns ## KEGG: Vpar_0521 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 660 1 660 660 1242 99.0 0 MKFSHSWRWYRKAILALFFCTSLTTAQAIDFMPVNDVTTGMEGIAKTVIVGDTISTFDVK VLGVMKDKGPSGHLILAKFSGPVMDQTGGIAHGMSGSPVYINGKLVGAVAYGWGFADGTI GMITPIEDMVKLWNIPYEKNLSKPWDDTQLIPLGTPLMAYGFDAASMEYFKSKLPQYKYE TYDTASASGDEIAKPLEAGGSVAALLVDGDLKLGAIGTVTHVDGEKVVAFGHPFLKHGSS NYFMHNASIFTVVKSYNAAFKLGSMGKEIGSVTEDRGAGIAGVSGVISPGIPLRFHLKDI DMGRDRTSSVKVIEDGEMTPTLAATALYNMLNKTLDRSGSGTATISYTITPKGKEHKPLT RTNMFYSSDSISEKAVDEFYNVIDVLMNNRFINYEISDISVETNVTQDKKTAKLIDASAS STVVSPGDTIVVDVTLEPFRGEKVIKQIFFKVPEDQAIGKYTLEVRGGGEIPLPYVLEKQ KYNLTDEILRRLKVHKDFDELYDEIQKTDTNNQIVVEFLEDGISLVDEDGSQSVKKAKLK DVESKPMPGDVKKKTGQEDLSSSKDDEKKPEKTAVDTEYIVQGDGQFTIHVMKPADRDKE LAKRVKEAKHQIKMERKLELEDQSKKDKTDKAESKKDSKKESKETNKKDEANAGGTNTAE >gi|292596530|gb|ADCV01000018.1| GENE 83 84928 - 85212 519 94 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0520 NR:ns ## KEGG: Vpar_0520 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 94 1 94 94 92 100.0 5e-18 MKRVVLALAALGILSVSSVMAAPVSYQSVLTGKVASTVSVGTSVTEGQTLVTVETLAGPM AAAKSTVTGTVTAVNVTVGSDVSRDQIVVTVESK >gi|292596530|gb|ADCV01000018.1| GENE 84 85301 - 86641 1346 446 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0519 NR:ns ## KEGG: Vpar_0519 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 446 1 446 446 805 99.0 0 MKRYLYMTFAVLGLLGSTVPHAEAGNLTGVRVSNHEGTSRIVLDVSEMPVSWTQSYNEET HALTLNLGGTTNGLTGPISQNDKKTGVLKGIGLQPVNGALRVTLTANKDVQHHEFALEKP SRIVVDLFSGYAQQTTKDVNKSVTYSKINNTVAEGKIQAFALTVDNDSPMVVAHVPEGKP LSSVTQAHTAIIGAKVKGGSFERPYSVASDGAIDLERISNRGTLRYTPNRGYFIEEKKPL LQAKTKNESFVITSVDTVRKENALTLYTSTYGPSTKTNEYGYEVTVANGKVISKQKGNSK IGENQYVLSGHGESGSALRKLKVGTPITIQNREELAQVSTTGGASLEVGTMVMKGGRYVG ADESNNKGRSFIGTTKEHDLVVLTVDKSELQSVGVTQKEGAQLLSKLGVVDGAELSNQGS IDIVINDDYVHKSSAPMSYEDIVIIK >gi|292596530|gb|ADCV01000018.1| GENE 85 86869 - 88254 1343 461 aa, chain - ## HITS:1 COG:CAC2858 KEGG:ns NR:ns ## COG: CAC2858 COG1077 # Protein_GI_number: 15896112 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Clostridium acetobutylicum # 131 460 8 336 340 308 49.0 1e-83 MFGLTNKSTQPKQNKKKRSRRSKGPALYNEQQNLGAAKVENSKASTTRKPLRRTKRKSTK LSNGVAKQANHLASNMRETMIKVTKMRRAERRSRETVAIAKTTPAMTLKRLVRPEQVGDF MSRLNRSLNFDLGIDLGTANILIFAKGKGLVLDEPAYIARDDKTGDILALGEAARSMVGR TPKGISVIRPVQAGVIADYDMTEFMLKYFIRSVVPASRLMKTRIIVCVPSGITPVEKRAI LEALLRTGAKKTVLIEEPLAAAMGTGLNDAKHVGAMVVDVGGGTTDIAVLCDTGVVVSES LRIGGDSFNESIIRYIRRKKRLVIGPLTAEKIKISVGTVDRRAKERTIEVRGRDASSGLP KMVAVNSLEIQRALEAQVMNVLEGVKSILEKTPPELVAAINDHGIILTGGGALIDGLDRV ITRSIGIAAYLVESPRYAVIKGVAKALDEMSQLRDTLDELQ >gi|292596530|gb|ADCV01000018.1| GENE 86 88235 - 89500 1502 421 aa, chain - ## HITS:1 COG:BH3749 KEGG:ns NR:ns ## COG: BH3749 COG0766 # Protein_GI_number: 15616311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Bacillus halodurans # 1 421 1 419 440 479 61.0 1e-135 MEKLIIQGGNRLEGRVRVSSAKNAVLPIIAGTLLASTPSKLLEIPNLEDVGTICQVIESL GVKITRNNADGEIVFDASTLTATEAPYELVRKMRASFLVMGPLLARKGEAKISMPGGCAI GARPIDLHLKAFEALGAKIEITEDYVYAHAPEGLKGTQIYLDFPSVGATENVIMAASMAE GKTVIENAAEEPEIVDLATFLNAMGANIRGAGTNVIRIEGVPQLHGAIHTVIPDRIEAGT YLIAAAMAGGDVFVENALPEHLKPVVAKLKEAGVTVEEEIDGIRVISSGKGIKAVDIKTL PYPGFPTDMQAQFMALTTIAEGTSTVTETVFENRFMHVAELRKMGAHIDIDNRQAIVEGM PSLHGAIVNATDLRAGAALVCAALTAEGRTEVGRLHHIDRGYDDFVGKLQRLGADIVRVD E >gi|292596530|gb|ADCV01000018.1| GENE 87 89703 - 90665 1471 320 aa, chain - ## HITS:1 COG:CAC1088 KEGG:ns NR:ns ## COG: CAC1088 COG1494 # Protein_GI_number: 15894373 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Clostridium acetobutylicum # 2 315 3 320 324 328 54.0 9e-90 MDRTLSLEFARVVEAAALRSGRLLGRGQKDAADGLAVDAMRQAFDSVRISGTVVIGEGEI DEAPMLYIGEHVGAGGPEVDIAVDPIEGTNLIAKGQNGAIAVMAIAEKGGLLHAPDMYME KLCVGPRGAGAIDITKSLTENIKNVAAKMERNVDEITLVMLDRERHQGLMKEAREVGARI MLISDGDVNPAMECCIEGSGVHMVVGTGGAPEGVLAAAALKCVGGDMQARLKPETEEEIR RCHEMGIADVNQVLTLNDLVRTDDVIFAATAITRGNLLNPIQYFPGGARTHTIVMRSKTG TVRFLDTVHMDHKLKTLKAK >gi|292596530|gb|ADCV01000018.1| GENE 88 90725 - 91369 870 214 aa, chain - ## HITS:1 COG:CAC1347 KEGG:ns NR:ns ## COG: CAC1347 COG0176 # Protein_GI_number: 15894626 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Clostridium acetobutylicum # 1 212 1 212 215 268 63.0 5e-72 MRFFIDTAEFDEIKEAYDFGFIDGVTTNPSLIVKAKRDLKQVISEIANLVDGPVSAEVIS SDAEGMVAEAHDLVKLGSNVVIKVPMTPEGLKAVAILSKEGIKTNVTLIFSANQALLAAR AGASYVSPFVGRIDDISMDGLTLIQDITDIFAIHEIETEIIAASVRTPLHIIQCAKAGAH IATVPFKVLMQAMKHPLTDAGLAKFMEDWKQANQ >gi|292596530|gb|ADCV01000018.1| GENE 89 91383 - 92663 1826 426 aa, chain - ## HITS:1 COG:lin2890 KEGG:ns NR:ns ## COG: lin2890 COG0172 # Protein_GI_number: 16801950 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Listeria innocua # 1 426 1 427 427 536 62.0 1e-152 MLDLKFVRENIDLVQQNLDNRHTKGDLKTFVSAYDERRQLIGRVEELKALRNSVTEEISK LKRNKENADEKIAEMKKVGDEIAEFDNRIREVETKLRDAALMLPNMCDASVPVGADEDEN VEQRKWGEPRQFNFDVQAHWDLGESLDILDFNRAGKMSGARFTVYKGLGARLERALINFM VDLHVDKHGYTEMMTPYMVTRETLTGTGQLPKFAEDMYHVEGTEYFLIPTAEVTLTNYHG GEIFSEEELPKYYTAFTACFRAEAGSAGRDTRGLIRQHQFNKVEMVKLAKPEDSFKELET LTDNAEEVLRLLELPFRVITLCTGDMGFGSAKTYDVEVWMPAQGKYREISSCSNMTDFQA RRANIKFRRGPKGKPEFVHTLNGSGLAVGRTVAAILENYQQADGSVVIPKVLVPYMGGVE VISPAK >gi|292596530|gb|ADCV01000018.1| GENE 90 92789 - 93742 1042 317 aa, chain - ## HITS:1 COG:YPO2505 KEGG:ns NR:ns ## COG: YPO2505 COG3965 # Protein_GI_number: 16122726 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Yersinia pestis # 10 305 17 312 312 205 34.0 1e-52 MDILGARRSIEQKLLMQSVALMALVAVSGTVMGIVTGSSAVLLDGVFSFVDVVIKIMMLM TAKLVARETSKRFQFGFWQFEPLVLAVEGFFILLIVIYALSSGITDLLSGGRHVDFGPAI FYAIFFTVADTAYYLYVRRINKSLQSNLIKFDNVSWYVDALLEAAILISFVVATMLESTE YARWATYIDPIVLIILAVQMIPSAFRIIVPSMKQILGWAPTSLHNEVQEIMDRFMEKYNF KDYVTSVQVYGNTRIIEIDILVPKSFPYQTIAEIDAIRNEIDQEIGGNPTEKWVTISFTG TRKWMAKDYLLDEEEDE >gi|292596530|gb|ADCV01000018.1| GENE 91 93985 - 95265 1059 426 aa, chain - ## HITS:1 COG:CAC0282 KEGG:ns NR:ns ## COG: CAC0282 COG0402 # Protein_GI_number: 15893574 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Clostridium acetobutylicum # 6 425 9 427 428 439 50.0 1e-123 MNSTIILKGNILYTPNPSALVSIQQGYVIAVDGVVVHCGESIPTVYTEYDVVDYGDNLII PGFVDTHAHAPQYCNRGLGMDKGLLPWLETYTFPEEAKFIDPDYARLVYGAFVHDLWRNG TTRSILFGTIHKDSTLVLMELLQKAGLSAYVGKVNMDRNSPEFLIEETNQSLADTKVWLD ASAQFGPLVKPIITPRFVPSCTSELMTGLAKLAKEYDVPVQSHLSENHGEIDWVASLHPE SSNYTDVYYEHHLMGTVPTVMAHCIHLSDVEMDRMAETQTMVSHCPYSNVNLSSGIAPIR KLIERNIPIGLGSDISGGHIVSMAKVLTEAIGLSKMKWAEVDPNYAPLTLSEAFYMATKG GGQFFGHVGSFEKGYELDALIIDDTSLFDLNERSLEERLERWLYVGDDRHIIERYVAGRV VPSPKG >gi|292596530|gb|ADCV01000018.1| GENE 92 95367 - 96710 1147 447 aa, chain - ## HITS:1 COG:MJ0326 KEGG:ns NR:ns ## COG: MJ0326 COG2252 # Protein_GI_number: 15668500 # Func_class: R General function prediction only # Function: Permeases # Organism: Methanococcus jannaschii # 16 445 6 431 436 339 46.0 8e-93 MSSMDYERGNQANGCLDRFFKLTKHGTSVKTEIFAGITMFIASVYILAVIPNLLSVSGMP HGSAVAAVILTTAFATMLIGFVANVPVIVAPGLGLSAFFSYTICGAMGLSWQTALGAVFI SGTVFVILTVTKVLNKIVDGIPQVLKTSIGVGIGLFVAFIGFKNAHIIISDNATFVTLGN MKDPAVLLTLLGLFITSILLAKQVKGGLLIGMAFTTILAMVLGLTKVPISSSDIFNLVPP FPVDTFGQLDVMSAIGYGFFSIIFSITIVDMFDNIGTLIGVTRKANLVNEKGKFEGLNRA LLCTSIGAAAGAVVGTSTVTSYIESAAAVADGGRTGLTAVVTGLLYLVSLFFAPLFLLVP VQATAPVLITIGVFMMSEVTHIDFTDFTEALPAFLTILLMPLTFSIAQGLSFGFISYTLI KLATGRHHEIHPIMYIMTVAFIIHFAI >gi|292596530|gb|ADCV01000018.1| GENE 93 97301 - 98818 1973 505 aa, chain - ## HITS:1 COG:BH0098 KEGG:ns NR:ns ## COG: BH0098 COG1190 # Protein_GI_number: 15612661 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Bacillus halodurans # 1 492 1 493 501 567 58.0 1e-161 MSEEIKNIQEELNEQMQIRRDKLAEYEADGIYPFGQRFVVKDYAKDIKEDFFLKYDGQPV VIAGRLMTIRSHGKTAFANIRDKSGDIQVYFRKDVLGEDAYKYVKMLDIGDIIGVEGHVF KTHTGEVTIKVNKLTLLSKSLRPLPEKWHGLKDTELRYRQRYVDLIVNPEVRDTFVKRSQ IVAKIREYMMRDGFMEVETPMMHAIPGGAAARPFITHHNALDIDIYMRIAPELYLKRLIV GGMDRVFEMNRCFRNEGIDNRHNPEFTTIESYQAYGDVEDAIRLTENLVSYCAQEVLGTQ EITYQGTEINLTPPWNRITMAEGVKKYTGEDFDAVTTIEEARAIADRLNVEYTENDGIGK ILNLCFEDYVEENLIQPTIVYGHPKEISPLAKASRENPLATERFEAFIYGRELANGFSEL NDPIDQKQRFLDQLKEREAGDDEAHRMDEDFVTALEYGLPPTAGLGVGIDRLVMFLTDSA SIRDVLLFPLMKPEAPKHFEAEEAE >gi|292596530|gb|ADCV01000018.1| GENE 94 98848 - 99321 754 157 aa, chain - ## HITS:1 COG:CAC3198 KEGG:ns NR:ns ## COG: CAC3198 COG0782 # Protein_GI_number: 15896445 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Clostridium acetobutylicum # 1 157 1 158 158 154 56.0 7e-38 MADVKETLLTAEGLKKLEEELAYYKSVRRIEVSERIKTAIEYGDISENSEYDDAKNEQAF IEGHIVELENKINTAKIIDESVKGDVVSVGSKVTVLDTMYNDELEYVIVGSSEADPFNNR ISNESPVGKAILGKRKGDEVEVSTPDGPVTFKVLAIQ >gi|292596530|gb|ADCV01000018.1| GENE 95 99445 - 100431 587 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 4 308 26 330 353 230 37 2e-59 MNNKQWQIGAVKIDGQAILAPMAGVSDIAYRLLAKKHGAALVCTEMVSAMGIKYKNERTH ELLRIEEAERPVSMQIFGSNPEAIALGAKVVADAGADIVDINMGCPVKKVVTSGDGSALM KNPDLAARVAEAAVEAIDVPVTVKMRIGWDSDSINVVDFAKRIESTGVAAIAVHGRTKEQ MYSGHADWSYIKAVKEAVSVPVLGNGDIVNPEDAKQMLDETGCDAVMVGRGAQGNPWIFG RIHHYLATGEVLPAPTDIERLDMLLKHFDLLCQYKGESMAVKEIRTHAGWYMKGLPESAY WRNRVNTIHTVTSFHNELESYRKILSEG >gi|292596530|gb|ADCV01000018.1| GENE 96 100526 - 101293 841 255 aa, chain - ## HITS:1 COG:CAC3200 KEGG:ns NR:ns ## COG: CAC3200 COG1521 # Protein_GI_number: 15896447 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Clostridium acetobutylicum # 1 255 12 269 273 318 60.0 7e-87 MLLVIDVGNTNIVLGVYDKTELVGHWRISTDRVRTTDEYGMLMMNLFFHDRKVDVKDINA IIISSVVPPLMPTLERVCLRYFNVNPLIVGPGTKTGIAIKYDNPREVGADRIVNAVAAHE LYKGDLIIIDFGTATTYCAVQGNGDYMGGVITPGVTISAEALFQRAAKLPRIDVRDPGQV ICRNTVSSMQSGMFYGYVGQVEGLVSRMKAEMGNHVTVVATGGLAQLISSATDCIDHVEP MLTLEGLRLIYERNK >gi|292596530|gb|ADCV01000018.1| GENE 97 101303 - 102277 1022 324 aa, chain - ## HITS:1 COG:BH1685_2 KEGG:ns NR:ns ## COG: BH1685_2 COG0340 # Protein_GI_number: 15614248 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Bacillus halodurans # 72 320 3 252 254 198 40.0 1e-50 MRDEVLEFLRQNQGSFVSGQDMSEACHVSRTAIWKHIKALRQKGYKIESYTKRGYRLLEE PDLLSPLAMKQILKTDVFGKRYVYMDTTESTNLEARRLAQQGAEEGTVVVTEEQAAGRGR LSRGWYSPFGKGLWFSLILRPDFPPVEAPKCTLMAAVALTKAFHKMGLTDAGIKWPNDIL VNGRKLVGILTEMSGSMEEISHIVMGIGVNVKTKQEELPEELKLIATSLAMEDIDIERTE AFRLILEELEHQYYEVLDSGFDETLNEWRQLSVTLGEEIEVRAPGNTYEGVATDIDEDGN LLVRISDGTIKRIVAGDVSIRPRK >gi|292596530|gb|ADCV01000018.1| GENE 98 102551 - 103792 780 413 aa, chain + ## HITS:1 COG:VC0438 KEGG:ns NR:ns ## COG: VC0438 COG2966 # Protein_GI_number: 15640465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 28 230 81 281 289 73 26.0 7e-13 MECGANTNRIIEEMLKAATFMGIPHDYLNIHISYTTIMVNLLHKERSITVFRKTPVHIPN MAMINAVSKLTWRAFERHYSLTTYERLIAKLDTTIPTYPNWIKGLACALGSAGLAYLYSG DIIAFIVTIICSSIGYFTRTLSGRLGLNEYVGIALGGFGAMISAYAFYSHVNNESLLYVL VCCTLFMIPGVPLINCVIDIINNHILSGMTRAIRTLLIVGSMTLGMAMALYFSPAPAFNF VDIKPHVISIEQVIGSFTAAAAFAVLFNAPVRLLVSIGIGGVLCVCIRNILSVELGFSTP GATFIGAAIMSIIFVKVSTWLKTSSTIIIVPSAIALMPGILYYRFLFDMLHINALNDASL ILMIQNGVTGTFTTIAIAIGVAIPNVLAQKYLQKLKEQRMTELLATRHINDGQ >gi|292596530|gb|ADCV01000018.1| GENE 99 103846 - 105774 1466 642 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 6 592 6 593 636 569 50 1e-161 MGRFTKNIVLYLLIIAAFVIAIDAFSGQSANKSELSYTGFIQQVQQKKVESVTITNDHGI KGKLKNGTEFNSYAPTDETLIKTLQDNGVEITAAPPEQPAWWMSLLGSAIPIIILVVLFF FIMQQTQGGGGRVMNFGKSRAKLMGEGNVKVSFKDVAGAEEAKQELEEVVEFLKDPGKFT TIGAKIPKGVLLAGPPGTGKTLLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFT QAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATN RPDILDPALLRPGRFDRQVIVGRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTG ADLSNLLNEAALLAARLNKKVITMAEVEEASEKVSMGPERRSHIVSDKDRKLTAYHESGH AIVAHLLPYADPVHKVTIIPRGAAGGYTMMLPTEEQNYKTKSQLLADIRVALGGRIAEAL ILDEISTGASGDLQSVTNTARAMVTRWGMSDELGPIVFGEQQEQIFLGKNLGHERNYSEE IAAKIDSEIHRIVEEAYKDVTKLLSDNEKFLHDMANALLEEETIDAKAVDNLYKYGTTKE PEAEEPKVASEVEGSVVPESVDAKEITSTVADPSEASSNEIK >gi|292596530|gb|ADCV01000018.1| GENE 100 105863 - 106408 746 181 aa, chain - ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 180 1 178 178 206 52.0 2e-53 MHQDAKDILYTEEQLKARVAELGHQISADYKGESVVLVGVLKGAIVFFTDLARSIDENVD VSFDFISCSSYGSGTTSTGVVRILKDLDRSVEGKHVLVVEDIVDTGTTLHYLLENLHARG AKSVRLAALLNKPERRKMDVEVDYVGFVIPDYFVIGYGLDYAEKYRHLPYIGILKEEMYQ D >gi|292596530|gb|ADCV01000018.1| GENE 101 106432 - 107430 519 332 aa, chain - ## HITS:1 COG:BS_yacA KEGG:ns NR:ns ## COG: BS_yacA COG0037 # Protein_GI_number: 16077135 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Bacillus subtilis # 7 307 1 302 472 149 32.0 6e-36 MNVKALIRTVNHTLKLHDIFPENCRILVACSGGPDSMALLHLLQDIATHRHTVYELGVAI VDHCIRSESKDEVLWLRNQADVLGLPFYTAVFDVPKLSQAQKLSEETIGRQVRYQWLTGI AQSEGYDYIAVAHHKDDQAESILAHLIRGTGLNGLTGMAVVSNDYTVPVVRPLLDVTKEE LLLYLKEKDISYCIDSTNEDVRYQRNRIRHRIIPELKAINPIVIDAIVRLGASVREDISL ISNLTDMAFDELVTISDEGAFISRRGLRKKPLAIQRRLWQRLVSIFDPEIKLTTAHQEQL LDIVNTGEKKTFNIKSIKVSAQCDTIKVYCKH >gi|292596530|gb|ADCV01000018.1| GENE 102 107399 - 108295 942 298 aa, chain - ## HITS:1 COG:MA0083 KEGG:ns NR:ns ## COG: MA0083 COG0248 # Protein_GI_number: 20088982 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Methanosarcina acetivorans str.C2A # 3 287 12 309 543 119 31.0 7e-27 MKLAIIDIGSNSVRLLLATYENNEWRYEPKQLWTTRLGQRNTDGTLRDESMEASYQAFTD IQKIANEYGADYCFGFATSAVREAANGLAFMERINTYCPMEWRILSGAEEAMYGFYGALG NQLEDGRHYTTIDIGGGSTELALGNKDGVYWSRSYPVGAVRLQSISDEGPQRVWEETRFL WDPMMIEGEFGEFIGIGGTLTTLAAIDLGLDHYDGTKVQGHKLSRETVEGIIMNLRYMSR DERLQVKGLPAGRADIIVAGAEILTSFMDFYEVPHVFVSDQDGMEAMARECESTHSNR >gi|292596530|gb|ADCV01000018.1| GENE 103 108392 - 108793 674 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372859|ref|ZP_03856338.1| predicted RNA-binding protein with ribosomal protein S1 domain [Veillonella parvula DSM 2008] # 1 133 1 133 133 264 99 2e-69 MAIEVGNIIDGTVSGITKFGVFVDLGEKQTGLVHISEVAHGYIEDINTLLKVEDPVKVKV LSIDGNKIGLSIRQTQPKEGMDEEKRPHRVQSKQSIESFEAKMKSFLRDSNERLHDLKRN TEGKRGGRGGRRD >gi|292596530|gb|ADCV01000018.1| GENE 104 108864 - 109196 289 110 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0499 NR:ns ## KEGG: Vpar_0499 # Name: not_defined # Def: septum formation initiator # Organism: V.parvula # Pathway: not_defined # 1 110 1 110 110 137 99.0 9e-32 MTQDTMDVQRPKRPRKRVRPNRKAQDQRIILMWIKRIGIGIMVLLLLGQAYRLVAVYQEK QHIEQQLQELQQRNEELEQEKARLQDPKTIEGVAREELGLVKPGEVPYVK >gi|292596530|gb|ADCV01000018.1| GENE 105 109374 - 110321 941 315 aa, chain - ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 1 309 2 309 318 259 40.0 4e-69 MKLRKVGIIGTGHVGSHVAFSLALQGEVDGLYLMDIDEKKAQAQAMDINDAVSYIPHQVT ATSGPIEECGDCDILVFSAGPLPNLYQDRLESLGETVAVLKDVIPRIKQSSFQGFIISIS NPADVVATYLCKHLEWNPKRIISTGTALDSARLQKELAHIFTISNRSITAYCLGEHGGSA MVPWSHVCVQGKPLLELYRELPHRFPKLDHTKVLDDVKIGGYHVLAGKGSTEFGIASATT ELIRAVFHDEKKVLPCSCYLNGQYGEEGIFASTPAVIGKDGIEDVLELQLTNEELALFKA SCAVIREHVAKAEAM >gi|292596530|gb|ADCV01000018.1| GENE 106 110416 - 111231 662 271 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0497 NR:ns ## KEGG: Vpar_0497 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 271 1 271 271 506 94.0 1e-142 MNIKRIGLFVLALIIMGISYWLAVGANYDSKTVRIDPEAHTLVNSSDAIISKRILAMKTS GSQVYFLGYEGLGIYNLSDNALRLMPITFRGQHIEPTKSDDYQRGLRNITKLKSLSDFSA EEQKEFKGLLESTDGGAHYYGDFYHSGYESSLIDLKDQYFITNTVRALKRVNHTLYVYDG SGFIIIDLDNRRIQGFFNNRISGEGSKGVPDSLRGHYGSDFTMIYALSKLDPTDLDILWS MRKQYLEKSPQAMEGKDLFPLNLDEMNLNEL >gi|292596530|gb|ADCV01000018.1| GENE 107 111333 - 111803 255 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 5 142 123 254 278 102 39 7e-32 MYTYYISVGSNMGDKRGYISSAFRSLLHHEAISRLVTSPLIETEPWGYTEQDTFVNGVWS CESTLDPHQMLSLIQQLEQEAGRKRLIHWGPRTLDLDIILVYDIEGKMISLCDESLVIPH PHFWNRKFVIEPLSQLLPTFTYKGTKIADRLAQLGV >gi|292596530|gb|ADCV01000018.1| GENE 108 111803 - 112165 138 120 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 117 1 117 278 57 26 7e-32 MDRIVLKNMAFYGYHGNLASEQEQGQRFFVDVEIITDLTKAGQSDQLEDSINYVEVYEIV ESIMTGEKHNLLERLGALIADSLYQHYQGIVGLSVTVRKPSVPISGILDYVEVITTRGQI >gi|292596530|gb|ADCV01000018.1| GENE 109 112165 - 112998 1057 277 aa, chain - ## HITS:1 COG:FN0073 KEGG:ns NR:ns ## COG: FN0073 COG0294 # Protein_GI_number: 19703425 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Fusobacterium nucleatum # 13 275 11 274 277 254 51.0 1e-67 MFKRRNYTWNDGKNLSLCDRTLIMGILNGTPDSFSDGGQFNTPETATAHVKQMIEDGADI IDLGVESTRPGSTPLTTDEEIERLSLLIEPVLKASTVPVSIDTYHAKTAEYAFSKGAHIL NDVWGLHYDPDMAAVVAKYKVPVIIMHNSNDTNYGDIIEDMKAFFFCAIDKALKEGVTPQ QIWLDPGIGFGKTEEQNIEVMQRLGELTAYEYPVLLAPSRKRFIGSMLGGLPPEDRDEGT VAACITGVFQGVDMVRVHNVKMHKRALAVADGLLRGE >gi|292596530|gb|ADCV01000018.1| GENE 110 112991 - 113560 391 189 aa, chain - ## HITS:1 COG:SPy1097 KEGG:ns NR:ns ## COG: SPy1097 COG0302 # Protein_GI_number: 15675080 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Streptococcus pyogenes M1 GAS # 3 182 18 197 200 150 39.0 2e-36 MNQRANDGIKQFLEALSVDTEAPELEKTPSRVTELYGELFSGVGVETKSVWGETFSTDYK GLIAVTGIPFYSMCEHHLLPFFGTVDIVYQPKDGCVAGLSKFQDVVNILSRRPQLQERLA SELADAIMNDLSAHGVFVRITSTQLCMLIKGTMQQDSKVITLESRGVLAETGTVRDEALA MLGGGQVNV >gi|292596530|gb|ADCV01000018.1| GENE 111 113569 - 115125 1656 518 aa, chain - ## HITS:1 COG:SP0770 KEGG:ns NR:ns ## COG: SP0770 COG0488 # Protein_GI_number: 15900664 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 1 514 1 513 513 666 61.0 0 MSVLTVSNVTHGFGARQILDDASFRLLKGEHVGLIGANGEGKSTFLNIITGKLPPDEGKI EWSNQVTVGYLDQHAVLEKGMTIRDVLQRAFDDLFVMEQNINDAYNRMGDVSEDEMNKLL EQVGEWQEILEQRGFYEIDAVIERTAAGLGLMDIGLDRDVTELSGGQRTKVLLTKLLLEK PTILLLDEPTNYLDVEHIQWLQNYLQNYENAFILISHDMEFLNSVVNVIYHIEQAVLTRY TGDYHQFQAAYEVKKAQAAKAYERQQQEIERMEDFIQRNKARVATRGMANSRAKRLEKME ILEKPKEYIKPTFGFKEGRTPSRFIVEAFGLQLGYDEPLTRPVDFQIERNKKIAIRGVNG LGKTTLLKTILGLLKPVSGELVKGEFLQVGYFAQEDTPSNSETALDYIWNEYPAMTNAEV RAALARCGLTNEHITSQMRVLSGGENAKVRLCKLMQNKYNVLVLDEPTNHLDIYAKEELS RALRDFKGAIILVSHEPEFYQDWVTDIWNIEDWTTKIV >gi|292596530|gb|ADCV01000018.1| GENE 112 115236 - 116375 1209 379 aa, chain - ## HITS:1 COG:SA1935 KEGG:ns NR:ns ## COG: SA1935 COG1473 # Protein_GI_number: 15927707 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Staphylococcus aureus N315 # 24 373 21 370 394 165 33.0 1e-40 MTLQEREARACAIIDSMARELRAVSIYLHDNPELGLNEHKAVKVIHQFLETHNFISHVSL TNRPELQTALRGDYNGTARHKIAFLGEYDALPELGHGCGHNLIAMMSLGAAVAFSQSAPQ DWGTTFFGCPAEETIGGKVYMAEAGLFKGYEAALIIHPGGENEVGGTSLATHPLEVTFHG RSCHIASLTDSGINALDCAVDLYQRVKDLKKTFPKGAIVGAIFTEAGTAPNVVTPKATIR MTVRGSTVDDLEGIILPAIKEAAQEIGSSYGAQVEMHHYEPLFKDMRQDKQLLNLFKDVM TEFGESPRILPDDEADGSTDVGNVSYEVPTAQPTLQIGLGLEAHTPEFTCAAGSDYGLDQ AIKGAKIMAVVALRYAMCK >gi|292596530|gb|ADCV01000018.1| GENE 113 116502 - 117440 889 312 aa, chain - ## HITS:1 COG:CAC0293 KEGG:ns NR:ns ## COG: CAC0293 COG1619 # Protein_GI_number: 15893585 # Func_class: V Defense mechanisms # Function: Uncharacterized proteins, homologs of microcin C7 resistance protein MccF # Organism: Clostridium acetobutylicum # 7 309 4 302 306 153 32.0 5e-37 MDWIEPKRLAPGMTIGIMAPASASDEDLHRIEEICKAKGYKVLVGESARRKGLYGGTPEE QAVEFQYMMTVAPCDTVLALRGGYGTMRYLDLLDYKAIRKYRKAFVGYSDCTALHMAINR YSRLITYHGPMGVDFKLDRKSDIDTLFNALEGKLKVIEPLPEPPRGAIGTELGEGILRGG NMTMVSMLSGTPYFLENESWEDTLLFIEDVGEAPYKLDRMLQQFRLSGLLSRIKGLVIGI FTDCEGDEDERDYDLGYEALRYMEENRNPKLPDPFVCYVPTGHGAPHQTLPLGATISFRY ISNTIIVHPYTK >gi|292596530|gb|ADCV01000018.1| GENE 114 117530 - 119131 1739 533 aa, chain - ## HITS:1 COG:BS_dppE KEGG:ns NR:ns ## COG: BS_dppE COG4166 # Protein_GI_number: 16078361 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Bacillus subtilis # 43 533 57 548 549 358 38.0 1e-98 MMDKRNLLKLMVLALGVSVLLFVFGYPRGVQPIDEHTIRYVIEQEPSTLDPAKSTTSPEA TVQLQLFDGLVRLNDESEPEAALAKNWDISDDGREYTFHLRPNLKWSNGEPLTAYDFEYA WKRVLDPEVHADNAYMLYVLENGEAFNTGKAAAEDVGVKAIDEDTLVVTLENPTAYFLKL LASHSYYPVSKKAVEAHENWAANAETIVSNGPYRLLSWKHNGEMDFIKNPNYWDAESVKT EKMNWPISESQSTRLTLVEGGEADMTVEPPVADQKRLEEAGLLHIGPMLGNYYYVFNVKA EPFTDPDVRKAFSMVINRANIVNNIVRGGKEPAYAFVPYGMLESNGREDFREAGSYLVYE DVEQAKEILKKAGYGKNRPLPQITILYNTSELHKAIAEAIQDAWINAFGADVRLQNQETK VFLADREAGKYQVARASWVADYSDPQNFLEVFSAEDNDGQYHSDEYNELIARIRTTPNGA ARDALMHEAEKMIFDESLVMPLYFTTQPYVTNGTIQNYFWTTLGLVDFKKAYK >gi|292596530|gb|ADCV01000018.1| GENE 115 119128 - 119946 750 272 aa, chain - ## HITS:1 COG:FN1584 KEGG:ns NR:ns ## COG: FN1584 COG2367 # Protein_GI_number: 19704905 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Fusobacterium nucleatum # 54 271 45 263 264 124 35.0 2e-28 MEKLIVGKSLEHQLDTVIKELAPAGNISYAVLQFDDEEEPTLIAARGENTVHSSASLIKV LIMEYVFHLARTEQLDINDTVPLSRTPRVEGGGALQELVGKHSFTYLELCRLMMVLSDNI ATNLLITVLGMENINARAEKLGMDEMELNRMMMDFNALAEGRDNHITAMSLARLYKHIFE CRDRDAYGREMWNILGRQQFRDILPFYWGEGIRFHHKTGSLDRVEHDGGVIETFRGHFCF ILLMSDIDNDRGKELGAQVGRIMKEFVEEALP >gi|292596530|gb|ADCV01000018.1| GENE 116 119959 - 120906 614 315 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 8 312 15 324 329 241 43 2e-62 MSYVWETDNLVKEFTLSGGLFKPKQTVHAVQGVSLYQSPGETLGIVGESGCGKSTFGYTL MGLYQATSGSIYMNGRHINPYVDRESVHPVMQMVFQNPYASLNPRLTVNAILEEPLELDP KYTPRDRVIRVKEVLDQVGLNMSFGERYAHELSGGQRQRIGIARALIMEPQCIICDEPIS ALDVSIQVQIMTLLERLQEQHGISYLFISHDLNMVRYISHRMVVMYLGAVMEEGPALDLY EFPQHPYTRALTALNGPVMPHAPIGAPLKGDPPNPLDPPKGCLFSGRCPEAEGRCFTERP PLRDWADRHIACWHI >gi|292596530|gb|ADCV01000018.1| GENE 117 120906 - 121886 500 326 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 20 320 33 326 329 197 37 3e-49 MNNAIVDVRNVSITINTFQGPLRVIRNQDISLYPGEILGIVGESGCGKSVLVNSLMGLLP YGKTKIKADTFMIDGHDCLGFTEDDWNELRGTTVAMVFQDPMTSLNPIMTIGEQMYEVIR RTNAYGEDYDERAIAIDLLKKMGLSTPERRLSQYPHELSGGMRQRVCIAMAVAGRPKILI CDEPTTALDITTEAQILRLMQTLAVEAGIGIIFISHNLRVIAQICDRVMVMYAGKCVESA TVDGIFSEPRHPYTLGLLLALPQGKWHGELKAVEGQPPDLFDLPRGCAFNPRCKWAMRIC GSRVPMVTNVGESHQFTCWLAKLEGL >gi|292596530|gb|ADCV01000018.1| GENE 118 121886 - 122785 988 299 aa, chain - ## HITS:1 COG:CAC3637 KEGG:ns NR:ns ## COG: CAC3637 COG1173 # Protein_GI_number: 15896871 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 19 295 26 302 305 293 55.0 2e-79 MNKEDFLPIERAPQEEITSFIKRPSKWERFKVNRLAVVGATIIIVMMVLAILGPLISPYT YADQSLIDANQSPSFSHWFGTDTLGRDIYTRVMYGARISLTIGFVAAFINLVIGVAYGGI AGYIGGKVDRIMMGIVDVLYGIPLLLYVILLMVVLGPGLISIFVALGIAYWLNMARIVRS QILKVKNEEYIIAAEAMGIPKRRILLRHILPNCVGPIIITLTLAIPEAIFTEAFLSFIGL GVNAPMASWGVLASEGISSMRSYPFQLIFPAVAISITMLGFAFFGDGLRNVLDPKEGDR >gi|292596530|gb|ADCV01000018.1| GENE 119 122778 - 123710 920 310 aa, chain - ## HITS:1 COG:BS_oppB KEGG:ns NR:ns ## COG: BS_oppB COG0601 # Protein_GI_number: 16078209 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus subtilis # 1 302 1 302 311 301 53.0 8e-82 MTRYVFRRLGGAIIILWVIITVTFALMHAIPGGPFTTEKKLPPQVKASIEAKYHLDDPVW KQYGDYLGGVITGDLGPSFKYEGRSVNDIIGDAFPISAQLGLLSLMVAIVGGITAGAISA MRPNSIVDYAVTVLSTIGISVPTFIIGAVLVYIVGFELGWFPVALWRGPSYMVLPVLTLA AQPMAFIARLTRSGLLDVYQQEYIRTARAKGLGSWTILTRHALGNAILPVITYLGPLAAS LLTGSFIVETIFAIPGLGQYFVTSIYNRDYTVILGITIFYSALVVFLNILVDMIYPLIDP RVTTEEGTDE >gi|292596530|gb|ADCV01000018.1| GENE 120 123846 - 124679 691 277 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 3 268 4 272 290 192 38.0 5e-49 MIAVPRVLTIQDMSSIGRCALTVMIPIISAMRCQAVPLATAVLSNHLEYPHYEFVDLSAH MRDFMDCWDKNEIDFHAIVSGFLASPEQIHLVEEAIDRFASNGQMVIVDPAMADDGRLYS IYTPDMVVAMRQLVSKAHIVKPNYTEACFLLDIPFSTNPISEDELRERCKQLHHMGPEMV IMTSVPSKTHAVIAVYDGPTDFLKTYSIPLVPVKATGTGDIFTAVLSGAVMRGYSPYDAA ELAMNFTTNAIQATLDTVQSLKHGVAFELVLPELTQL >gi|292596530|gb|ADCV01000018.1| GENE 121 124701 - 125285 441 194 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0482 NR:ns ## KEGG: Vpar_0482 # Name: not_defined # Def: protein of unknown function DUF805 # Organism: V.parvula # Pathway: not_defined # 27 183 1 157 168 290 98.0 2e-77 MDLLYVVLRTLLICTIGLLIAFQGRRMGLSIFNLTGRLNRLQFIICFIALMILFHIVHYI DNIFLDFVVSLPAYWLTRVIIWLLLATLFPLSCVLFGRRIHDIGFNAWAGILWSVIMIFI NTYSAVSPFNYMLELFIWLIGFLFWVLPGQPEPNQYGNPPFMTVNRTVYEPIQTPISNKK QEGRKTVRKRRKKR >gi|292596530|gb|ADCV01000018.1| GENE 122 125415 - 126584 789 389 aa, chain - ## HITS:1 COG:no KEGG:Vpar_0481 NR:ns ## KEGG: Vpar_0481 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 389 1 389 389 779 100.0 0 MTKIFTKLRALVDEALSDRDAVVDKAPVLEKAPLEQDLFDHRLLYIEEDMVNRMLRAALR NHWFFYAVTFEFEPNNQIFLSIITKWGNVINVEFTLEDLWFDDYSSSFAIRLDTNNIDTG GFILNSILHLLGNWCLSLFGIFFNPIALGEKGSTVRFEKKGIIQFDLLPNTQVKKFIPMP ERHIGSNGPVLLGNPRTSQSVLQLDYYAFHDPVDTFTVPDVPTRTSWLRSIDIAAVLLLP IGVWITFIILHHYLPTETLEFSFSTYFLISLGIFIISFLVMNIPRYLYMYFDSRKQWQSA FVHNNIKIQMRKLHRRIFMQQATLTADCDEYTANESQERIKHLLLQIRDKRFLANRLKIA DDDRARKQKVKFIIAYIGCTLIELMLLMN >gi|292596530|gb|ADCV01000018.1| GENE 123 126857 - 130444 2598 1195 aa, chain - ## HITS:1 COG:BS_cydC KEGG:ns NR:ns ## COG: BS_cydC COG4988 # Protein_GI_number: 16080925 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Bacillus subtilis # 8 569 3 565 567 284 32.0 9e-76 MIQHTAFKALLEHKGQLGLLGLTCLIESLSIVGQAWFFGTLINNLIFLEHTLADETNTII YLFIAIIVRLVAHYVQEAVANHLGSAVKASFRERSLAHMFKLGIQHKERHGDVIHMLTDG LEQVDAYIARYIPQILYAIMIPLIMGIAIVNTLPIIGIILIVTVPLIPFFMILIGKQADR LNKEQWERMSFLSGHFLDVLQGITTLKLFGRAKDQIKVIGRLSQEFKDSTLRVLRVAFLS ALVLELVSTISTALIAVYLGLTLLDGEVTFFSAFFILLLAPEFYTPFRQLGAAFHTGIAG KTSILKYEEFMQRPPSLPVGGESKLDKPIQEITIKDLTFTYKNSENGVHHITLQAERNAP IMLVGESGAGKSTMAHIVGGFLQAPKGTVTIDGIDICDLDINWWRQQIIYVSQHPHIMKG SLREVLSFGMDVSDAEILDACKEVQLLDVINREQDGLDAVIGEGGLGLSGGERQRIALAR AFLRKGQVLILDEVTAHLDVKTESIISAAIQRLMKNKIVIIIGHRLQTMHWASKLYVLKN GSIIQEGSYHDLLEEDGYFKELVTSGLGQLSATLEEPLYIGKQFGSENTLGIDTPINGIE HFVKFVKYTETFKDNAKGSNMGIQGWKLLFSVLNPAKWSLVLALLFTFLTVFMNVGLLTV SSWLLASAALQPGLTYLSLAIVGVRFFGVSRAVCRYFERYTSHRMAFQGLYGLRLWFYAH LEPLAPAILKRFGAGDMLGRIMGDIEVLQFFYLRTLIPPVAAVALTILIAYGVSTIDNSL IIPILLSAFVLGVIVPLVVYSYNKESLRTIGPQQGDYKALLSDTMDSLEDVISYGNEDMV YKRIQHMMRNVDAQKGTIERGMNMGNTLFIGGVQLTVVIVAIMASNVLTGAWASVMVAVA AIGTQAWFEALQPMIAAVHHGAESKVATSRLMALSNEPISIVEPISPKSFNPNEDIIFTD VSFGYDEYRHIYENLRLHIQQGESIAIVGASGSGKTTLFNMLERLYDYGGSIRIGSVELK DISIDTWRNALGTITQDTYIFNASFKDNILLARPEASMEDLELAINRASLRSVVEKLPEG MNTIVGSGGQGLSGGERQRVALARLFLRNPKIVLLDEPLEGLDQVTRKALHRDLMHYVEG RTCLYITHQLEGLEQMDRILFMDKGQIVEDGTYEELMALKGRFYEYCYLSMASIQ >gi|292596530|gb|ADCV01000018.1| GENE 124 130644 - 131663 1168 339 aa, chain - ## HITS:1 COG:lin2865 KEGG:ns NR:ns ## COG: lin2865 COG1294 # Protein_GI_number: 16801925 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Listeria innocua # 7 336 2 333 337 249 42.0 5e-66 MELIFNNLEVVWFILITVLFAGFFLLEGFDYGTGILLPFIGKTDVERRQMINALGPVWDG NEVWMITAGGALFASFPHVYATLFSGFYLALFLMLAALIIRGVSFEFRSKSPNLLWRKTF DYCIFFGSLIPALLWGVTVGNLIQGTPIDASMTYVGTFFDLLSPYTILCGIAFILVFTYH GGLFTSIKTAGAISERARAASLVVGVPTAIGALALVGATYLYTDLFNSVLAVVCFALTIV FFLISWGAARTRNTKLGFLFSSLSVISVTAAYFAGLFPRIMVSSLNPEWSLTITNAANST YTLTLMTCVAFVFVPIILVYQSWVYWTFRHRVTEKDLHY >gi|292596530|gb|ADCV01000018.1| GENE 125 131654 - 133042 1742 462 aa, chain - ## HITS:1 COG:lin2866 KEGG:ns NR:ns ## COG: lin2866 COG1271 # Protein_GI_number: 16801926 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Listeria innocua # 7 447 6 446 468 459 51.0 1e-129 MFEAVDLARLQFALTSIYHWLFVPFTLGMTVIVAALEWTYVSTGKEVYKKMAKFWGKLFL INFAMGVVTGIVQEFHFGMNWAEYSRFMGDIFGAPLALEALMAFFLESTFMGVWIFGWDR LHKCVHALVATFVALGTNLSAFWILVANSFMQHPVGFVLRNGRAEMENFLIIVQNGYVPG QFFHIVLNGLLTAGVIIMAVSAWHLLRNNATEFYRRSAKWGMVIALVFGTLGALAGHHQG QYITKVQPMKMAAMEALWETQDPAPFSLVANIDTKAQKNTNALEIPGGLSFLTQNSFTSG KVEGIKDLQAKAEAQYGPGNYIPDVPAIFWTFRVMVASGSLMLLVAFVGLILNAKDKLVE NRTFLKIMFWMLPLPFIAHSTGWFVAEAGRQPWLVYGLQLTADGASKSVTAPEIMTTIIG FTLVYIVAAIAAIYLAVEHIKKGPDGNPSHDVVEKEEARLWN >gi|292596530|gb|ADCV01000018.1| GENE 126 133128 - 133559 438 143 aa, chain - ## HITS:1 COG:CAC0115 KEGG:ns NR:ns ## COG: CAC0115 COG1959 # Protein_GI_number: 15893411 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Clostridium acetobutylicum # 1 132 1 132 137 102 43.0 2e-22 MKLNQATDYAFRMVLHMALLPSGSKITGAVLAEHELIPERFLLKIMRSLIAAGIMKSFRG VDGGFALNRSPQEISLLDVIRAVEGDAYLQRCLYDVGSCSKSCKGHCAINEAMGVIQHQL VNQLEAVNFKNLVQREQLIIAEA >gi|292596530|gb|ADCV01000018.1| GENE 127 133779 - 134273 501 164 aa, chain - ## HITS:1 COG:BS_moaB KEGG:ns NR:ns ## COG: BS_moaB COG0521 # Protein_GI_number: 16079998 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzymes # Organism: Bacillus subtilis # 10 164 14 168 170 167 57.0 1e-41 MSYEVVARPLRVAVLTVSDTRTLETDKGGNKVQEFLEAANHIVADRKIVIDDCESIINAM TPWCNDESIDVIISTGGTGIAMRDVTIEAVNSLYEKHIPGFGEIFRYLSYTEDIGTKAMA SRAEAGVKNNTLMFSIPGSVGAVTLAMSKLIIPEMGHLVREITK >gi|292596530|gb|ADCV01000018.1| GENE 128 134282 - 135142 697 286 aa, chain - ## HITS:1 COG:CAC0436 KEGG:ns NR:ns ## COG: CAC0436 COG0726 # Protein_GI_number: 15893727 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Clostridium acetobutylicum # 42 242 55 257 295 143 36.0 5e-34 MYKYGKSCIKTLLYCIAICIAILAVSIGVMWGLSSDYKLYGVPVLNYHQINDEKHSALTL HVDQFKEQIEYLHNHGYNTITLNQLYDYLQNGSDLPEKPIVITFDDGYVDNYEHALPILK EYNMKATLFMISDAANTPGFVNTAQMHQMETAGFDIQGHTNHHKILTHMDPTELPDAILG GKTSMEGILGEPISYLAYPGGFNDMLVQYVTKQSGYKMAFTVQPGTVKPGDNLYALNRLA VFQGDTPYLSFWLRLHCAPLIKYTWALRDTLRDNGWPILASIMPLF Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:30:55 2011 Seq name: gi|292596529|gb|ADCV01000019.1| Veillonella sp. 3_1_44 cont1.19, whole genome shotgun sequence Length of sequence - 1998 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 162 - 1690 99.0 # DQ346429 [D:1..1542] # 16S ribosomal RNA # uncultured Veillonella sp. # Bacteria; Firmicutes; Clostridia; Clostridiales; Veillonellaceae; Veillonella; environmental samples. + TRNA 1871 - 1947 102.1 # Ile GAT 0 0 Predicted protein(s) Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:30:56 2011 Seq name: gi|292596528|gb|ADCV01000020.1| Veillonella sp. 3_1_44 cont1.20, whole genome shotgun sequence Length of sequence - 2997 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1328 - 1405 101 ## + LSU_RRNA 1860 - 2175 91.0 # CP000232 [D:149966..152937] # 23S ribosomal RNA # Moorella thermoacetica ATCC 39073 # Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella. + LSU_RRNA 2326 - 2880 94.0 # X68423 [D:1..2924] # 23S ribosomal RNA # Pectinatus frisingensis # Bacteria; Firmicutes; Clostridia; Clostridiales; Veillonellaceae; Pectinatus. Predicted protein(s) >gi|292596528|gb|ADCV01000020.1| GENE 1 1328 - 1405 101 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSENVGMSSEKNGENPFHRKPKGS Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:00 2011 Seq name: gi|292596527|gb|ADCV01000021.1| Veillonella sp. 3_1_44 cont1.21, whole genome shotgun sequence Length of sequence - 1082 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1082 1537 ## Vpar_0464 YadA domain protein Predicted protein(s) >gi|292596527|gb|ADCV01000021.1| GENE 1 2 - 1082 1537 360 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0464 NR:ns ## KEGG: Vpar_0464 # Name: not_defined # Def: YadA domain protein # Organism: V.parvula # Pathway: not_defined # 1 360 780 1146 2235 431 89.0 1e-119 VTVKLDDATKGKVDNAADRDLSNLTPDGKQQVKDLAAWNVVANNEMAEKVEGGNTVKFID GDNISITQNGKDFTISTKKDVTFDTVTAIQTITAPKVKATTGVETPQVTGLTNTTWVPGQ TQPVSGRAATEDQLKQVDNQVVENKANIADNTDKIGKNADAIADNKQKIADNKTAIDKNA VDIATNKDNIAANKADIATNKDNIADNKQKIADNKSAIDKNTGDIATNKDNIAKNKDNID KNTTAIARKISLGGNSGSTNEKSLSTGDVKFNVKGENGLTTVANGDDVTVKLDDATKGKV DNAADRDLSNLTPDGKQQVKDLAAWNVVANNEMAEKVEGGNTVKFIDGDNISITQNGKDF Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:06 2011 Seq name: gi|292596526|gb|ADCV01000022.1| Veillonella sp. 3_1_44 cont1.22, whole genome shotgun sequence Length of sequence - 1032 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 2/0.000 + CDS 13 - 144 174 ## COG1943 Transposase and inactivated derivatives + Term 259 - 298 7.4 + Prom 276 - 335 1.9 2 1 Op 2 . + CDS 431 - 895 257 ## COG1943 Transposase and inactivated derivatives Predicted protein(s) >gi|292596526|gb|ADCV01000022.1| GENE 1 13 - 144 174 43 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 1 43 111 153 157 59 60.0 1e-09 MDTVGRYEGAIKEYIRNQLQEDIAQDTLNFKEYTDPFTGEPVK >gi|292596526|gb|ADCV01000022.1| GENE 2 431 - 895 257 154 aa, chain + ## HITS:1 COG:CAC3531 KEGG:ns NR:ns ## COG: CAC3531 COG1943 # Protein_GI_number: 15896768 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Clostridium acetobutylicum # 3 154 2 153 157 242 75.0 2e-64 MNDVKSLSHSKWRCKYHIVFAPKYRRQIIYGRIKADVGKILRDLCKRKNVEIIEAECCPD HIHMLVTIPPHLSVSSFMGYLKSKSSLMIFDKHANLKYKYGNRHFWCRGYYVDTVGRYEG AIKEYIRNQLQEDIAQDTLNFKEYTDPFTGEPVK Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:07 2011 Seq name: gi|292596525|gb|ADCV01000023.1| Veillonella sp. 3_1_44 cont1.23, whole genome shotgun sequence Length of sequence - 901 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 126 - 202 102.1 # Ile GAT 0 0 + TRNA 333 - 408 94.6 # Ala TGC 0 0 Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:08 2011 Seq name: gi|292596524|gb|ADCV01000024.1| Veillonella sp. 3_1_44 cont1.24, whole genome shotgun sequence Length of sequence - 794 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 105 - 181 102.1 # Ile GAT 0 0 + TRNA 192 - 267 94.6 # Ala TGC 0 0 Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:13 2011 Seq name: gi|292596523|gb|ADCV01000025.1| Veillonella sp. 3_1_44 cont1.25, whole genome shotgun sequence Length of sequence - 718 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 126 - 230 85.0 # CR954253 [D:49914..50030] # 5S ribosomal RNA # Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 # Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:14 2011 Seq name: gi|292596522|gb|ADCV01000026.1| Veillonella sp. 3_1_44 cont1.26, whole genome shotgun sequence Length of sequence - 703 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) Predicted protein(s) >gi|292596522|gb|ADCV01000026.1| GENE 1 573 - 701 59 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no NHCRVPPFGNLRVTGCLHLSVAYRSLPRPSSADIAKASTVRP Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:18 2011 Seq name: gi|292596521|gb|ADCV01000027.1| Veillonella sp. 3_1_44 cont1.27, whole genome shotgun sequence Length of sequence - 695 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 229 115 ## gi|238018871|ref|ZP_04599297.1| hypothetical protein VEIDISOL_00731 2 2 Op 1 . - CDS 300 - 446 59 ## 3 2 Op 2 . - CDS 453 - 695 149 ## gi|294795036|ref|ZP_06760171.1| conserved hypothetical protein Predicted protein(s) >gi|292596521|gb|ADCV01000027.1| GENE 1 2 - 229 115 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|238018871|ref|ZP_04599297.1| ## NR: gi|238018871|ref|ZP_04599297.1| hypothetical protein VEIDISOL_00731 [Veillonella dispar ATCC 17748] # 1 75 227 301 301 142 96.0 5e-33 QWGVGGQDNVTKTEVRFPIKFTTLFMANAIDAYWSGSDTPRYFANSVSESNATKAVFSAS DRYAASYYWFALGII >gi|292596521|gb|ADCV01000027.1| GENE 2 300 - 446 59 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSIFNAYNQPKPWTVRYPIEFANKTIAVSATRYNGEYSFSEIILLGTS >gi|292596521|gb|ADCV01000027.1| GENE 3 453 - 695 149 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|294795036|ref|ZP_06760171.1| ## NR: gi|294795036|ref|ZP_06760171.1| conserved hypothetical protein [Veillonella sp. 3_1_44] # 2 74 224 296 296 138 98.0 1e-31 AQWGLTWFDSNKYYKDISLPISSTVLIALATDDSVSVATSGSECFITWNSGFSQANRNII RFLTNRVDTGSFVWMTVGKA Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:32 2011 Seq name: gi|292596520|gb|ADCV01000028.1| Veillonella sp. 3_1_44 cont1.28, whole genome shotgun sequence Length of sequence - 681 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 118 - 222 85.0 # CR954253 [D:49914..50030] # 5S ribosomal RNA # Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 # Bacteria; Firmicutes; Lactobacillales; Lactobacillaceae; Lactobacillus. Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:32 2011 Seq name: gi|292596519|gb|ADCV01000029.1| Veillonella sp. 3_1_44 cont1.29, whole genome shotgun sequence Length of sequence - 660 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 659 730 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|292596519|gb|ADCV01000029.1| GENE 1 3 - 659 730 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 218 134 363 407 285 61 4e-78 FLNKADMVDDEELIELVEMEVRELLSSYEFPGDEVPIVVGSALKALEGDAQYVAKIDELM DAVDSYIPTPVRDTDKPFLMPVEDVFTITGRGTVATGRVERGQVNVGDTVEVVGLKEKAE QYVVTGLEMFRKVLDSAVAGDNVGALLRGVDRKDIERGQVLAKPGSINPHTKFKAEVYVL TKEEGGRHTPFFSNYRPQFYFRTTDVTGVVNLPEGVEMC Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:33 2011 Seq name: gi|292596518|gb|ADCV01000030.1| Veillonella sp. 3_1_44 cont1.30, whole genome shotgun sequence Length of sequence - 646 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 644 756 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|292596518|gb|ADCV01000030.1| GENE 1 3 - 644 756 214 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 214 1 227 407 295 66 4e-81 MAKEKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLAEKGQADFQDYSMIDKAPEERERG ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI LLARQVGVPAIVVFLNKADMVDDEELIELVEMEVRELLSSYEFPGDEVPIVVGSALKALE GDAQYVAKIDELMDAVDSYIPTPVRDTDKPFLMP Prediction of potential genes in microbial genomes Time: Wed Jun 1 06:31:34 2011 Seq name: gi|292596517|gb|ADCV01000031.1| Veillonella sp. 3_1_44 cont1.31, whole genome shotgun sequence Length of sequence - 644 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 642 707 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|292596517|gb|ADCV01000031.1| GENE 1 1 - 642 707 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 214 132 357 407 276 61 2e-75 VVFLNKADMVDDEELIELVEMEVRELLSSYEFPGDEVPIVVGSALKALEGDAQYVAKIDE LMDAVDSYIPTPVRDTDKPFLMPVEDVFTITGRGTVATGRVERGQVNVGDTVEVVGLKEK AEQYVVTGLEMFRKVLDSAVAGDNVGALLRGVDRKDIERGQVLAKPGSINPHTKFKAEVY VLTKEEGGRHTPFFSNYRPQFYFRTTDVTGVVNL