> PLPR0003 ..AC:AB013815 ..OS:Arabidopsis thaliana ..GENE:DREB1A ..PROD:DREB1A ..[ -200:  +51] ..CDS:+140 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.14   T -  0.30   C -  0.23

      1  gaataagtca aaaaaagtct tctctggaca catggcagat cttaatgagt
     51  gaatccttaa actactcatt ttacaattgc ttcgctgtgt atagtttacg
    101  tggcattacc agagacacaa actccgtctt cgccttttct tttgcctcta
    151  aaatatcttc cgccatTATA AAACagcatg ctctcactcc aacttttatt
    201  TATCTACAAA CATTAAATCC ACCTGAACTA GAACAGAAAG AGAGAGAAAC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00043   Mean Expected Number 0.001   +strand   -104 :  -97   TACGTGGC
AC RSP00051   Mean Expected Number 0.002   -strand    -97 : -106   GCCACGTAaA
AC RSP00247   Mean Expected Number 0.003   -strand    -97 : -106   GCCACGTAAa
AC RSP00653   Mean Expected Number 0.001   -strand    +48 :  +38   TTCTCTCTCtT
AC RSP00857   Mean Expected Number 0.010   +strand    +19 :  +28   CCAcCTGAAC
AC RSP00861   Mean Expected Number 0.001   +strand    +35 :  +43   AGAAAGAGA
AC RSP00864   Mean Expected Number 0.000   +strand    +39 :  +47   AGAGAGAGA
AC RSP00943   Mean Expected Number 0.008   +strand   -135 : -125   TCATTTtACAA
AC RSP01034   Mean Expected Number 0.003   +strand   -103 :  -97   ACGTGGC
AC RSP01575   Mean Expected Number 0.000   +strand   -175 : -162   GGACACATGgCAGA
AC RSP01596   Mean Expected Number 0.008   -strand   -125 : -135   TTGTaAAATGA

  Totally      11 motifs of    11 different REs have been found


Description of REs found

   42. Group TF: TAF-1 /AC: RSP00043//OS: Oryza sativa /GENE: rab16A-D/RE: Motif I core /TF: TAF-1
   50. Group RE: A3 /AC: RSP00051//OS: Hordeum vulgare /GENE: HVA22/RE: A3 /TF: unknown
  240. Group TF: REB /AC: RSP00247//OS: Oryza sativa /GENE: alpha-globulin/RE: REB1 /TF: REB ||Identical REs AC:  RSP00738
  627. Group RE: CT-LB /AC: RSP00653//OS: Spinacia oleracea /GENE: petH/RE: CT-LB /TF: unknown
  793. Group RE: NON /AC: RSP00857//OS: Zea mays /GENE: H4C7/RE: NON /TF: unknown
  797. Group TF: BPC1 /AC: RSP00861//OS: Arabidopsis thaliana /GENE: STK/RE: GA-2 /TF: BPC1
  800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
  872. Group TF: GBF /AC: RSP00943//OS: Lycopersicon esculentum /GENE: RbcS-3.6/RE: box III /TF: GBF
  959. Group TF: ABI3; ABI5; AREB1 /AC: RSP01034//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 1/2 /TF: ABI3; ABI5; AREB1
 1404. Group RE: ICEr1 /AC: RSP01575//OS: Arabidopsis thaliana /GENE: CBF2/RE: ICEr1 /TF: unknown
 1417. Group RE: Box III /AC: RSP01596//OS: Pisum sativum /GENE: rbcS-3.6/RE: Box III /TF: unknown

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