> PLPR0008 ..AC:U44744 ..OS:Arabidopsis thaliana ..GENE:AKT3 ..PROD:AKT3 ..[ -200: +51] ..CDS:+17 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.30 G - 0.11 T - 0.33 C - 0.26
1 caatttcact tcaatcttaa caaataggac caccactacc acgtacggtt
51 tgcatcatac aaaccacaaa ctccttcttc attacaatta ttatatcatc
101 tactaaaacc tctttctccc tctctctttc ttgttcttag tgctaaattt
151 tctttgttca ggagaaatat aatggacctc aagtattcag catctcattg
201 CAACTTATCC TCAGACATGA AGCTCAGGCG TTTTCATCAG CATCGAGGAA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00861 Mean Expected Number 0.006 -strand -70 : -78 AGAAAGAGA
AC RSP00953 Mean Expected Number 0.006 +strand -116 : -108 CAATTATTA
AC RSP01201 Mean Expected Number 0.002 +strand +18 : +25 TGAAGCTC
AC RSP01276 Mean Expected Number 0.004 -strand -155 : -162 GTACGTGG
Totally 4 motifs of 4 different REs have been found
Description of REs found
797. Group TF: BPC1 /AC: RSP00861//OS: Arabidopsis thaliana /GENE: STK/RE: GA-2 /TF: BPC1
880. Group TF: ATHB6 /AC: RSP00953//OS: Arabidopsis thaliana /GENE: ATHB6/RE: ATHB6 BS /TF: ATHB6
1112. Group TF: NIT2 /AC: RSP01201//OS: Chlorella vulgaris /GENE: NR/RE: NIT2 BS II /TF: NIT2
1175. Group RE: Box III /AC: RSP01276//OS: Petroselinum crispum /GENE: CHS/RE: Box III /TF: unknown
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