> PLPR0010 ..AC:X80051 ..OS:Phaseolus vulgaris ..GENE:ME1 ..PROD:NADP dependent malic enzyme ..[ -200: +51] ..CDS:+163 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.31 G - 0.16 T - 0.33 C - 0.21
1 cagcgaagga ctaaaatttc ttccatcatt tgattattac gcgtgccact
51 agtccaccct catctccatt caacattgaa actaactcat ttttgtcacg
101 taacaaaaca gaccaaagta aaaggtataa aaataaaata aaaagttgtc
151 ttgagagctT ATATATAgat tcattccaag gttgtttcgg acacatacca
201 AACTCGCATT CTGTTTTCCT CTGCTTGTTG TTGTTTTTGT CTGCGTAGGT
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00056 Mean Expected Number 0.004 +strand -156 : -147 GCCACTaGTC
AC RSP01073 Mean Expected Number 0.001 -strand +27 : +19 CAAGCAGAG
AC RSP01237 Mean Expected Number 0.008 -strand -31 : -40 aTCTATATAT
Totally 3 motifs of 3 different REs have been found
Description of REs found
55. Group TF: ABI3 /AC: RSP00056//OS: Brassica napus /GENE: napA/RE: ABRE Bd /TF: ABI3
991. Group TF: PvAlf /AC: RSP01073//OS: Arachis hypogea; Phaseolus vulgaris /GENE: Em/RE: Em2b /TF: PvAlf
1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown
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