> PLPR0011 ..AC:X63103 ..OS:Solanum tuberosum ..GENE:PAL-1 ..PROD:phenylalanine ammonia-lyase ..[ -200:  +51] ..TSS:201 (+1) # Alternative TSS(s):  -18  -14  -12  -10   -8   -6   -4   -2   +3 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.31   G -  0.07   T -  0.37   C -  0.25

      1  tgttcttcca acaaccacca ttttagtctt ttcctagcaa ccccctctca
     51  catatttgtc attgttcctc tctattatac tcaccacata tcccatctcc
    101  acaacaacaa gaagaaagtt ttataagttc ataatatttt ttttattatc
    151  atatatcTAT ATATAcaaat aaactctaag cattttctct tcactaaaat
    201  TTCTTGTATT ACTCTTCTTG ATCCAATGGC ACCATCAATT GCACAAAATG
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00235   Mean Expected Number 0.000   +strand    +18 :  +29   TTgATCCAATGG
AC RSP00613   Mean Expected Number 0.009   -strand    +22 :  +15   ATCAAGAA
AC RSP00669   Mean Expected Number 0.002   -strand    -50 :  -63   TGATAATAaAAAAA
AC RSP00863   Mean Expected Number 0.007   -strand   -128 : -136   AGAGAGGAA
AC RSP01755   Mean Expected Number 0.007   +strand   -189 : -182   CAACCACC

  Totally       5 motifs of     5 different REs have been found


Description of REs found

  228. Group TF: LFU; WUS /AC: RSP00235//OS: Arabidopsis thaliana /GENE: AGAMAOUS (AG)/RE: LBS/WBS1 /TF: LFU; WUS
  589. Group RE: UN Z1 /AC: RSP00613//OS: Lycopersicon esculentum /GENE: rbcS2/RE: UN Z1 /TF: unknown
  640. Group RE: B-box /AC: RSP00669//OS: Lycopersicon esculentum /GENE: PG/RE: B-box /TF: unknown
  799. Group TF: BPC1 /AC: RSP00863//OS: Arabidopsis thaliana /GENE: STK/RE: GA-4 /TF: BPC1
 1560. Group TF: C1 /AC: RSP01755//OS: Glycine max /GENE: a2/RE: C1BS1 /TF: C1