> PLPR0017 ..AC:AF151961 ..OS:Vigna radiata ..GENE:ACS7 ..PROD:1-aminocyclopropane-1-carboxylic acid synthase ..[ -200:  +51] ..CDS:+116 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.25   G -  0.10   T -  0.34   C -  0.30

      1  tactagggag cctggacttc tcgtgacatg cttcggacgg tggacaaaag
     51  cgcttttaaa ttaaacccat ttattcactc actctctctc ttctcgagaa
    101  accctacatt ttttattctc aaactgtttc accATTGCca cttggctctc
    151  tacccttttg gacttccacT ATAAATAtat aaccaacctt actcctcttc
    201  ATACACACAC CAATTTCTCT TCAACATTCC ACTCCGAATA TTCTTCTCTT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00056   Mean Expected Number 0.008   +strand    -64 :  -55   GCCACTTGgC
AC RSP00073   Mean Expected Number 0.001   +strand    -64 :  -55   GCCACtTGGC
AC RSP00073   Mean Expected Number 0.001   -strand    -55 :  -64   GCCAaGTGGC
AC RSP00187   Mean Expected Number 0.010   -strand   -158 : -162   CCACC
AC RSP00270   Mean Expected Number 0.003   +strand    -50 :  -40   TACcCTTTTGG
AC RSP00284   Mean Expected Number 0.002   -strand   -161 : -166   CCGTCC
AC RSP00683   Mean Expected Number 0.008   -strand    -55 :  -64   GCCAAGTGGc
AC RSP00778   Mean Expected Number 0.006   -strand   -124 : -133   TGAATAAATG
AC RSP00864   Mean Expected Number 0.010   -strand   -110 : -118   AGAGAGAGA
AC RSP01296   Mean Expected Number 0.003   +strand    -32 :  -24   CTATAAATA

  Totally      10 motifs of     9 different REs have been found


Description of REs found

   55. Group TF: ABI3 /AC: RSP00056//OS: Brassica napus /GENE: napA/RE: ABRE Bd /TF: ABI3
   72. Group TF: TAF-1 /AC: RSP00073//OS: Nicotiana tabacum /GENE: Synthetic OLIGO/RE: PA /TF: TAF-1 ||Identical REs AC:  RSP00274
  181. Group RE: CCACC box /AC: RSP00187//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: CCACC box /TF: unknown
  262. Group TF: OBP1 /AC: RSP00270//OS: Arabidopsis thaliana /GENE: GST6/RE: OBP1 BS /TF: OBP1
  275. Group RE: Box A /AC: RSP00284//OS: Petroselinum crispum /GENE: PAL-1/RE: Box A /TF: unknown ||Identical REs AC:  RSP00849  RSP00856
  652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
  733. Group RE: Box III /AC: RSP00778//OS: Arabidopsis thaliana /GENE: AtS1/RE: Box III /TF: unknown
  800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF