> PLPR0022 ..AC:AF326577 ..OS:Zea mays ..GENE:anthocyanin regulatory B protein ..PROD:anthocyanin regulatory B protein ..[ -200: +51] ..CDS:+389 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
Nucleotide Frequencies: A - 0.21 G - 0.26 T - 0.29 C - 0.24
1 agaagagcga cgtcaggttc tagactattc ttgtggcctc gggcggatgg
51 cgggtaccca tgtcttcgtt aggcttatct gaccgtggag atgaaatcta
101 agcgctcata gaaattaaac taacgtggac actctgtcct tgctgttttg
151 ctccctgctc ttTATATATA gaatagaatg cctgcttgca ttgcacccgt
201 ACGTACAGCG TAGCGCGGAG TGGAGGTGAG CTCCTCCTCC GATTCTTGCC
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00115 Mean Expected Number 0.001 +strand -93 : -83 ATAGAAATtAA
AC RSP00248 Mean Expected Number 0.006 +strand -194 : -185 GCgACGTCAG
AC RSP00808 Mean Expected Number 0.008 -strand -77 : -83 GTTAGTT
AC RSP01237 Mean Expected Number 0.003 +strand -41 : -32 CTtTATATAT
AC RSP01237 Mean Expected Number 0.002 -strand -28 : -37 tTCTATATAT
Totally 5 motifs of 4 different REs have been found
Description of REs found
113. Group TF: ATBP-1 /AC: RSP00115//OS: Pisum sativum /GENE: GS2/RE: BOX 1 /TF: ATBP-1
241. Group TF: REB /AC: RSP00248//OS: Oryza sativa /GENE: alpha-globulin/RE: REB2 /TF: REB
761. Group TF: Pti4 /AC: RSP00808//OS: Arabidopsis thaliana /GENE: PDF1.2/RE: Myb1 /TF: Pti4 ||Identical REs AC: RSP00810 RSP00812 RSP00813
1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown
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