> PLPR0027 ..AC:AJ133743 ..OS:Arabidopsis thaliana ..GENE:ttg1 ..PROD:Ttg1 protein ..[ -200: +51] ..CDS:+111 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.33 G - 0.15 T - 0.33 C - 0.20
1 ttagtaaaat gattagagtg tcacatatta atgttgttag tgtttcatgt
51 catcctagtg atccaataat taggccattc tatagctcgt aacgttaaaa
101 taaaaggccc attatctgaa tatacagaag cccattaTCA ATagatacat
151 taaaagatac tgattaatcc agagggttta tatctacgcc gtctccattg
201 ATTATTTCTC CGTCTCTTGA AAAATCCGAC TGACACTGAC CTCAAAACTC
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00913 Mean Expected Number 0.003 -strand -147 : -156 GATGACATGA
AC RSP00916 Mean Expected Number 0.003 -strand -147 : -156 GATGACATGA
AC RSP01499 Mean Expected Number 0.004 +strand +6 : +15 TTCtCCGTCT
Totally 3 motifs of 3 different REs have been found
Description of REs found
844. Group TF: Opaque-2 /AC: RSP00913//OS: Zea mays /GENE: b-32/RE: B1 /TF: Opaque-2
847. Group TF: Opaque-2 /AC: RSP00916//OS: Zea mays /GENE: b-32/RE: B4 /TF: Opaque-2
1360. Group RE: CS6 /AC: RSP01499//OS: Triticum aestivum /GENE: H1 (TH315)/RE: CS6 /TF: unknown ||Identical REs AC: RSP01500
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