> PLPR0032 ..AC:U41998 ..OS:Arabidopsis thaliana ..GENE:ACT2 ..PROD:actin 2 ..[ -200: +51] ..CDS:+621 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.27 G - 0.20 T - 0.34 C - 0.19
1 aagggctgag atgattaatt agtttaaaaa ttagttaaca cgagggaaaa
51 ggctgtctga cagccaggtc acgttatctt tacctgtggt cgaaatgatt
101 cgtgtctgtc gattttaatt atttttttga aaggccgaaa ataaagttgt
151 aagagataaa cccgcctaTA TAAATTcata tattttcctc tccgctttga
201 ATTGTCTCGT TGTCCTCCTC ACTTTCATCA GCCGTTTTGA ATCTCCGGCG
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00681 Mean Expected Number 0.004 -strand -180 : -188 TAATTAATC
AC RSP00709 Mean Expected Number 0.008 +strand -85 : -77 TAATTATTT
AC RSP00891 Mean Expected Number 0.008 -strand -15 : -23 AAAATATAT
Totally 3 motifs of 3 different REs have been found
Description of REs found
650. Group RE: Box 4 /AC: RSP00681//OS: Pisum sativum /GENE: PSPAL2/RE: Box 4 /TF: unknown
675. Group RE: I-box /AC: RSP00709//OS: Pisum sativum /GENE: TOP2/RE: I-box /TF: unknown
823. Group TF: Dof family /AC: RSP00891//OS: Solanum melongena /GENE: SmCP/RE: EE 1 /TF: Dof family
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