> PLPR0034 ..AC:U71080 ..OS:Arabidopsis thaliana ..GENE:atC4H ..PROD:cinnamate-4-hydroxylase ..[ -200: +51] ..CDS:+87 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.24 G - 0.08 T - 0.31 C - 0.37
1 tttacctacc accatcaaca acaacaccaa gccccactca cacacacgca
51 atcacgttaa atctaacgcc gtttattatc tcatcattca ccaactccca
101 cgtacctaac gccgtttacc ttttgccgtt ggtcctcatt tctcaaacca
151 accaaacctc tccctctTAT AAAATcctct ctcccttctt tatttcttcc
201 TCAGCAGCTT CTTCTGCTTT CAATTACTCT CGCCGACGAT TTTCTCACCG
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00880 Mean Expected Number 0.001 -strand -70 : -79 CAACGGCAAa
AC RSP01228 Mean Expected Number 0.001 +strand -115 : -102 ATTCACCAACTCCC
AC RSP01229 Mean Expected Number 0.000 +strand -59 : -46 CTCAAACCAACCAA
AC RSP01276 Mean Expected Number 0.007 -strand -96 : -103 GTACGTGG
Totally 4 motifs of 4 different REs have been found
Description of REs found
816. Group TF: Dof family /AC: RSP00880//OS: Hordeum vulgare /GENE: Al21/RE: M1 /TF: Dof family
1133. Group RE: P-box 3 /AC: RSP01228//OS: Arabidopsis thaliana /GENE: C4H/RE: P-box 3 /TF: unknown
1134. Group RE: P-box 4 /AC: RSP01229//OS: Arabidopsis thaliana /GENE: C4H/RE: P-box 4 /TF: unknown
1175. Group RE: Box III /AC: RSP01276//OS: Petroselinum crispum /GENE: CHS/RE: Box III /TF: unknown
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