> PLPR0037 ..AC:D15051 ..OS:Hordeum vulgare ..GENE:Ids-2 ..PROD:ids2 ..[ -200: +51] ..CDS:+86 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.29 G - 0.18 T - 0.23 C - 0.29
1 ccatactaga cgacgaggac gatttgaacg gcaagtttca cgctgtcact
51 cccactctcg ctctcatttt attaatcact aacaaacgca tgatttgatc
101 agacacccaa aataggaata ggagatgcta tcatcaagca tgcttcttgc
151 tgcccagagc atcccacgac tacaaaacac ggctggccgg aggattataa
201 CACGATCGAG CGACCAATCC AAGCACCTAC GCACTCTTCT TTGCTCTCAT
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP01033 Mean Expected Number 0.008 -strand -85 : -94 CCTATTTTGG
AC RSP01456 Mean Expected Number 0.000 +strand -68 : -51 ATCAAGCATGCTTCTTGC
AC RSP01457 Mean Expected Number 0.000 +strand -177 : -151 TTGAACGGCAAGTTTCACGCTGTCACT
Totally 3 motifs of 3 different REs have been found
Description of REs found
958. Group TF: FLC /AC: RSP01033//OS: Arabidopsis thaliana /GENE: FT/RE: CArG box /TF: FLC ||Identical REs AC: RSP01204
1326. Group TF: PtMYB4 /AC: RSP01456//OS: Hordeum vulgare /GENE: IDS2/RE: IDE1 /TF: PtMYB4
1327. Group TF: PtMYB4 /AC: RSP01457//OS: Hordeum vulgare /GENE: IDS2/RE: IDE2 /TF: PtMYB4
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