> PLPR0042 ..AC:D63955 ..OS:Oryza sativa ..GENE:lip19 ..PROD:cold induction related protein ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.31   G -  0.15   T -  0.21   C -  0.33

      1  gggtagtaca aaaataccaa ctttcctggg tattaaaaca aaagaaaagc
     51  aaaaataata cacattgaca gatgagttaa cgcccgtgac aggctggcac
    101  acggaaaacg ccgtccagtc caacctccca tttttctcca aatccccaaa
    151  atgccctcct ccccagcTAT AAATAcaccc tcccagagcc cttctaaacc
    201  TTCCCCATCC GTCTAATTGC GCCCCTTATG CATTAGAGCC CCCGGAGTCC
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00024   Mean Expected Number 0.009   -strand   -141 : -148   TATTATTT
AC RSP00195   Mean Expected Number 0.001   -strand    -96 : -106   TCCGTGTgCCA
AC RSP00447   Mean Expected Number 0.009   +strand   -158 : -149   AGaAAAGCAA
AC RSP00963   Mean Expected Number 0.005   +strand   -128 : -122   TGAGTTA
AC RSP01296   Mean Expected Number 0.002   +strand    -34 :  -26   CTATAAATA
AC RSP01301   Mean Expected Number 0.001   +strand    -34 :  -25   CTATAAATAC

  Totally       6 motifs of     6 different REs have been found


Description of REs found

   23. Group TF: PCF1 /AC: RSP00024//OS: Pisum sativum /GENE: petE/RE: A/T-rich BOX3 /TF: PCF1
  188. Group RE: Box II /AC: RSP00195//OS: Oryza sativa /GENE: Gt2/RE: Box II /TF: unknown
  427. Group TF: Dof1 /AC: RSP00447//OS: Zea mays /GENE: pepcZm2A/RE: box b /TF: Dof1
  888. Group RE: GLM2 /AC: RSP00963//OS: Hordeum vulgare /GENE: ITR1/RE: GLM2 /TF: unknown
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302