> PLPR0045 ..AC:X75480 ..OS:Eucalyptus gunnii ..GENE:CAD ..PROD:cinnamyl-alcohol dehydrogenase ..[ -200: +51] ..CDS:+117 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.20 G - 0.18 T - 0.32 C - 0.30
1 aaaagcaagt cttgaccctt aacccacccc actggttcac ctaccgcacc
51 tctggttagg tattgcttgc tgaggtgtca cttttcgcca aagtcacgtc
101 tctcttttgg attcttcctA TTGGtccgtc tctttcctcg ttgctggttg
151 ctggtagcgt ttttgtccaa aTATATATGc agtccatatg tatccccgtc
201 ACTCCTCATC TATGCTCCTA CCCGGCAACT TCCCACTACG ATAAGAGCAA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00259 Mean Expected Number 0.009 +strand -148 : -142 TGGTTAG
AC RSP00722 Mean Expected Number 0.004 +strand +40 : +46 GATAAGA
AC RSP01008 Mean Expected Number 0.009 -strand -140 : -146 ACCTAAC
AC RSP01757 Mean Expected Number 0.005 -strand -185 : -192 GTCAAGAC
Totally 4 motifs of 4 different REs have been found
Description of REs found
252. Group TF: ATMyb2 /AC: RSP00259//OS: Arabidopsis thaliana /GENE: rd22/RE: ATMyb2 BS /TF: ATMyb2
687. Group RE: I-box /AC: RSP00722//OS: Nicotiana plumbaginifolia /GENE: rbcS 8B/RE: I-box /TF: unknown
933. Group TF: PtMYB1; PtMYB4 /AC: RSP01008//OS: Pinus sylvestris /GENE: PsGS1b/RE: GS1b AC box 3 (AC-III) /TF: PtMYB1; PtMYB4 ||Identical REs AC: RSP01455
1562. Group TF: B /AC: RSP01757//OS: Glycine max /GENE: a2/RE: BBS /TF: B
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