> PLPR0051 ..AC:X56139 ..OS:Glycine max ..GENE:sc514 ..PROD:lipoxygenase ..[ -200:  +51] ..CDS:+76 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.37   G -  0.17   T -  0.28   C -  0.18

      1  caatgccact gtgtatataa gaacagaaga aatcgaaaag aatcaatttg
     51  aatataatta agtatgcata gaacgtgttg catatggggg aggaggtgcc
    101  catagaaaaa tgaattaacc ggtggagctc atattaaaaa aatgatgttt
    151  atactttctc ccttctcaag tcctctataa ataccaaaat attcttggct
    201  TCCTCACACC ACAAGCTTCT CCTTCTTTTG GGAAAAGATT AACAATAAAA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00509   Mean Expected Number 0.002   +strand    -25 :  -14   TATAAATACCAa
AC RSP00600   Mean Expected Number 0.000   +strand   -198 : -187   ATgCCACTGTGT
AC RSP00698   Mean Expected Number 0.005   +strand    -90 :  -80   TGAATTAAcCG
AC RSP01032   Mean Expected Number 0.004   -strand    +31 :  +22   CCAAAAGAAG
AC RSP01209   Mean Expected Number 0.003   +strand    +22 :  +31   CTTCTTTTGG
AC RSP01296   Mean Expected Number 0.007   +strand    -26 :  -18   CTATAAATA
AC RSP01301   Mean Expected Number 0.001   +strand    -26 :  -17   CTATAAATAC
AC RSP01604   Mean Expected Number 0.004   +strand   -193 : -186   ACTGTGTA

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  485. Group RE: TATA box /AC: RSP00509//OS: Avena fatua /GENE: alpha-Amy2/A/RE: TATA box /TF: unknown
  576. Group RE: TSS N /AC: RSP00600//OS: Lycopersicon esculentum /GENE: rbcS1/RE: TSS N /TF: unknown
  664. Group RE: Box III /AC: RSP00698//OS: Brassica oleracea /GENE: SLG13/RE: Box III /TF: unknown
  957. Group TF: FLC /AC: RSP01032//OS: Arabidopsis thaliana /GENE: SOC1/RE: CArG box /TF: FLC
 1119. Group RE: EM1 /Group TF: MADS box TFs /AC: RSP01209//OS: Lepidium africanum /GENE: LaCRC/RE: EM1 /TF: MADS box TFs
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302
 1425. Group TF: SPF1 /AC: RSP01604//OS: Ipomoea batatas /GENE: Sporamin; beta-amylase/RE: SP8a /TF: SPF1