> PLPR0054 ..AC:X57845 ..OS:Hordeum vulgare ..GENE:nitrate reductase ..PROD:nitrate reductase ..[ -200: +51] ..CDS:+111 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
Nucleotide Frequencies: A - 0.20 G - 0.24 T - 0.27 C - 0.29
1 aagaaaacat cgtttttctg attttgactg actcgatctt gggcgtgcac
51 aaggaagcaa acagagagat atggagacga gtcgacataa ggatagggct
101 gctaccggcc ttttgagccg caccgtcact ccactcggga ggtcggcgtt
151 gcgtccttgc gtgtgtgTAT ATATAcctgc atccacaccg cttctctttt
201 CACCAGGCCA CCCCGTGCCG CCGGTTCCTT TCCTTTCATT TCCTCATCCG
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00379 Mean Expected Number 0.003 +strand -111 : -102 aGGATAGGGC
AC RSP01015 Mean Expected Number 0.006 -strand +42 : +33 gAAATGAAAG
Totally 2 motifs of 2 different REs have been found
Description of REs found
364. Group RE: LS7 /AC: RSP00379//OS: Lemna gibba /GENE: Lhcb2 (cabAB19)/RE: LS7 /TF: unknown
940. Group TF: GAPF /AC: RSP01015//OS: Arabidopsis thaliana /GENE: GapA/RE: Gap box 3 /TF: GAPF
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