> PLPR0056 ..AC:X63093 ..OS:Lycopersicon esculentum ..GENE:gast1 ..PROD:gast1 ..[ -200:  +51] ..CDS:+40 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.32   G -  0.19   T -  0.30   C -  0.19

      1  ccggttaata gtttggtcca aaaatattga tgcagttaat agattttgga
     51  ccaaactatc gatgctgtgt atagatttat tcaattttgc ataggggata
    101  ctgttggagt gtgacaacag caagtgctag gctaaagaga ttaaccactt
    151  gagaagatcc ctctcTATAA ATAgaagtcg attctctcaa agctctacac
    201  ACTTCACTTC CTCTCTTAGC TTCACACAAA ATTACTACAA TGGCTGGGAA
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00225   Mean Expected Number 0.000   -strand    +43 :  +31   CCATTGTAGTAAT
AC RSP00522   Mean Expected Number 0.009   +strand    -56 :  -50   CCACTTG
AC RSP00863   Mean Expected Number 0.001   -strand    +16 :   +8   AGAGAGGAA
AC RSP01296   Mean Expected Number 0.004   +strand    -36 :  -28   CTATAAATA

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  218. Group TF: LFY; WUS /AC: RSP00225//OS: Arabidopsis thaliana /GENE: AGAMAOUS (AG)/RE: LBS/WBS3 /TF: LFY; WUS
  498. Group TF: DPBF-1; DPBF-2 /AC: RSP00522//OS: Daucus carota /GENE: Dc3/RE: E2-core /TF: DPBF-1; DPBF-2
  799. Group TF: BPC1 /AC: RSP00863//OS: Arabidopsis thaliana /GENE: STK/RE: GA-4 /TF: BPC1
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF

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