> PLPR0059 ..AC:M72708 ..OS:Zea mays ..GENE:zein protein ..PROD:zein protein ..[ -200:  +51] ..CDS:+63 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.17   T -  0.27   C -  0.23

      1  gcattacaaa gttagcttca caagcgtatg aattcattga caacccttga
     51  catgtaaagt tgattcatat gtataagaaa gcttaatgat ctatctgtac
    101  atccaaatcc atgtactatg tttccacgtc atgcaacgca acattccaaa
    151  accatggatc atcTATAAAT Ggctagctcc cacatatgaa ctagtctcta
    201  TCATCATCCA ATCCAGATCA GCAAAGCGGC AGTGCGTAGA GAGGATCGTC
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00214   Mean Expected Number 0.003   -strand    -70 :  -77   TGACGTGG
AC RSP00215   Mean Expected Number 0.003   +strand    -77 :  -70   CCACGTCA
AC RSP00442   Mean Expected Number 0.007   -strand   -187 : -196   TAACTTTGtA
AC RSP00495   Mean Expected Number 0.005   +strand   -148 : -141   TGTAAAGT
AC RSP00985   Mean Expected Number 0.005   +strand   -191 : -182   AGTTAGcTTC
AC RSP01275   Mean Expected Number 0.005   +strand    -78 :  -69   TCCACGTCAT

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  207. Group TF: TGA1; GBF1 /AC: RSP00214//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: Hex motif /TF: TGA1; GBF1 ||Identical REs AC:  RSP01257  RSP01474
  208. Group TF: HBP-11(17); HBP-1b(c38) /AC: RSP00215//OS: Triticum aestivum /GENE: H3/RE: Hex /TF: HBP-11(17); HBP-1b(c38)
  422. Group TF: Dof1 /AC: RSP00442//OS: Zea mays /GENE: cyPPDK1/RE: box b /TF: Dof1
  471. Group RE: P-box 2 /AC: RSP00495//OS: Triticum aestivum /GENE: LMW-glutenin/RE: P-box 2 /TF: unknown ||Identical REs AC:  RSP00686
  906. Group TF: PBP (Myb305) /AC: RSP00985//OS: Antirrhinum majus /GENE: gPAL2/RE: P-box /TF: PBP (Myb305)
 1174. Group RE: ACE 2 /AC: RSP01275//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 2 /TF: unknown

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