> PLPR0062 ..AC:X81560 ..OS:Nicotiana tabacum ..GENE:Sp41a ..PROD:(1-)-beta-glucanase ..[ -200: +51] ..CDS:+188 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.27 G - 0.16 T - 0.39 C - 0.18
1 actttttagt ggaacttgtg caaagttttc tttatttatg tcaaaattgc
51 actattatgc catgaaatgc gtcacttggt atgcttggat tctttacatt
101 tctgtagtag tatttgtttt ttaagttaag tcATTGCcta agacagctcc
151 atcttctatt gcttgccTAT ATAAGaagca atagaatgct tccttaatgt
201 ACAATTCTAA CCCATGGTTA ACTTCTTAAC ATGTGTTACT AAGCCAAACT
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00301 Mean Expected Number 0.008 +strand -182 : -176 TGCAAAG
AC RSP00442 Mean Expected Number 0.007 -strand -173 : -182 aAACTTTGCA
Totally 2 motifs of 2 different REs have been found
Description of REs found
289. Group RE: PROL box /AC: RSP00301//OS: Oryza sativa /GENE: GluB-1/RE: PROL box /TF: unknown ||Identical REs AC: RSP00882
422. Group TF: Dof1 /AC: RSP00442//OS: Zea mays /GENE: cyPPDK1/RE: box b /TF: Dof1
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