> PLPR0064 ..AC:X87946 ..OS:Oryza sativa ..GENE:ZB8 ..PROD:phenylalanine ammonia-lyase ..[ -200:  +51] ..CDS:+137 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.22   G -  0.15   T -  0.18   C -  0.45

      1  accaccacac agccacagcg ccgcacacga aacttccaca ccgcagagcc
     51  caaaaacctc ccgttttctc tcctactccg cgacgctgac cgtgtgctct
    101  cgccttggat caccagacca tcaccaaccc ccctccgtca tccgtcctgc
    151  aggccaccca cccgcctatt taagccgcgc ctccccctcc attcccctcc
    201  AAGAAGAGCC GCACCATCCA GTGCAGTAGT ACACTAGCTC TTCTTCACAA
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00653   Mean Expected Number 0.005   +strand   -137 : -127   TTtTCTCTCCT
AC RSP00655   Mean Expected Number 0.003   +strand    -34 :  -28   TATTTAA
AC RSP01205   Mean Expected Number 0.002   +strand    -36 :  -27   CCTATTTAAG
AC RSP01710   Mean Expected Number 0.007   +strand    -36 :  -27   CCTATTTAAG

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  627. Group RE: CT-LB /AC: RSP00653//OS: Spinacia oleracea /GENE: petH/RE: CT-LB /TF: unknown
  629. Group RE: TATA box /AC: RSP00655//OS: Oryza sativa /GENE: PAL/RE: TATA box /TF: unknown
 1115. Group RE: EM2 /Group TF: MADS box TFs /AC: RSP01205//OS: Arabidopsis thaliana /GENE: AtCRC/RE: EM2 /TF: MADS box TFs
 1518. Group TF: RIN /AC: RSP01710//OS: Solanum lycopersicum /GENE: Synthetic OLIGO/RE: RIN BSC Intermediate /TF: RIN