> PLPR0067 ..AC:X51910 ..OS:Oryza sativa ..GENE:GOS2 ..PROD:GOS2 ..[ -200:  +51] ..CDS+1177 ..TSS:201 (+1) # Alternative TSS(s):  +72 |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.22   T -  0.15   C -  0.29

      1  catattgggc acacaggcaa caacagagtg gctgcccaca gaacaaccca
     51  caaaaaacga tgatctaacg gaggacagca agtccgcaac aaccttttaa
    101  cagcaggctt tgcggccagg agagaggagg agaggcaaag aaaaccaagc
    151  atcctcctcc tcccatcTAT AAATTcctcc ccccttttcc cctctctata
    201  TAGGAGGCAT CCAAGCCAAG AAGAGGGAGA GCACCAAGGA CACGCGACTA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00161   Mean Expected Number 0.010   -strand    -10 :  -20   GGGAAAAGGGG
AC RSP00161   Mean Expected Number 0.010   -strand   -100 : -110   GTTAAAAGGTT
AC RSP00254   Mean Expected Number 0.003   +strand    -18 :  -12   CCTTTTC
AC RSP00653   Mean Expected Number 0.006   -strand    -73 :  -83   TcCTCTCTCCT
AC RSP00695   Mean Expected Number 0.010   +strand    -33 :  -27   TATAAAT
AC RSP01301   Mean Expected Number 0.009   +strand    -34 :  -25   CTATAAATtC

  Totally       6 motifs of     5 different REs have been found


Description of REs found

  156. Group TF: Dof1 /AC: RSP00161//OS: Zea mays /GENE: Synthetic oligonucleotids/RE: Dof1 BSopt /TF: Dof1
  247. Group RE: Py box /AC: RSP00254//OS: Hordeum vulgare /GENE: Amy pHV19/RE: Py box /TF: unknown ||Identical REs AC:  RSP00676
  627. Group RE: CT-LB /AC: RSP00653//OS: Spinacia oleracea /GENE: petH/RE: CT-LB /TF: unknown
  661. Group RE: TATA box /AC: RSP00695//OS: Oryza sativa /GENE: Gt1/RE: TATA box /TF: unknown
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302