> PLPR0068 ..AC:X51909 S76887 ..OS:Oryza sativa ..GENE:GOS9 ..PROD:GOS9 ..[ -200:  +51] ..CDS:+56 ..TSS:201 (+1) # Alternative TSS(s):  +72 |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.35   G -  0.21   T -  0.28   C -  0.16

      1  gtcaactatg tatcacaaca gtaaaaaagg tttgtggaat gaggtgagaa
     51  aaatgttgcc ttctaaggaa gaagctagta aaccttcaca attcgcaagt
    101  tgataaaaca aaattttgct ttgttgtttt ggataagatt tgttatgtct
    151  gcatgcttat atatccagca cTATAAATAg gaggcgctca ctggttgcaa
    201  CCATAGCAGT ACAACTAGTC ACAGATACAT AGTAGGACAG AGGCTACAAA
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00447   Mean Expected Number 0.003   -strand    -76 :  -85   AaCAAAGCAA
AC RSP00943   Mean Expected Number 0.006   -strand   -159 : -169   TCATTcCACAA
AC RSP01296   Mean Expected Number 0.005   +strand    -30 :  -22   CTATAAATA
AC RSP01596   Mean Expected Number 0.006   +strand   -169 : -159   TTGTGgAATGA

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  427. Group TF: Dof1 /AC: RSP00447//OS: Zea mays /GENE: pepcZm2A/RE: box b /TF: Dof1
  872. Group TF: GBF /AC: RSP00943//OS: Lycopersicon esculentum /GENE: RbcS-3.6/RE: box III /TF: GBF
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1417. Group RE: Box III /AC: RSP01596//OS: Pisum sativum /GENE: rbcS-3.6/RE: Box III /TF: unknown