> PLPR0073 ..AC:U83670 ..OS:Oryza sativa ..GENE:OSHSP18.0 ..PROD:low molecular mass heat shock protein Oshsp18.0 ..[ -200: +51] ..CDS:+120 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
Nucleotide Frequencies: A - 0.34 G - 0.22 T - 0.18 C - 0.27
1 cggggtgggc tgtagccata gcgtccagga ctctccagaa taatctaggc
51 cataagcagg cctagaacaa tccagaagac cacttccaat ttcggcccaa
101 attaacgaac aaacgagaac tatccggaag caaaacttcc agtagaaccc
151 atggaccatc acgaactgga TATAAATTgt tgccaccacg cagcgacagg
201 TGCCAAGGAA ATCAGCTCAT CGATCGAAAG ATCAACAAGC TCTCTTGAGA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00320 Mean Expected Number 0.002 +strand +15 : +25 GcTCATCGATC
Totally 1 motifs of 1 different REs have been found
Description of REs found
306. Group RE: Box I /Group TF: RNFG1 /AC: RSP00320//OS: Oryza sativa tungro bacillform virus (RTBV; plant pararetrovirus) /GENE: RTBV promoter/RE: Box I /TF: RNFG1
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