> PLPR0078 ..AC:U07362 ..OS:Petunia hybrida ..GENE:S1 ..PROD:S1 self-incompatibility ribonuclease precursor ..[ -200:  +51] ..CDS:+26 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.35   G -  0.16   T -  0.32   C -  0.18

      1  gtccacacat ccacgtgtct catatatatt atttttaaaa ggctgttaac
     51  actatttaag tgccctaatc cacttcttct agtacagatt ctagcttgaa
    101  aaaaaaatta gttaggttag tgaagtgata agtcctatat taacccattc
    151  cactgaaaat acgattatTA TATATTgcca tatagcaaaa ggaaggaact
    201  AAACATGAGT TGTTCAAACT TTAGAATGTT CAAGTTACAG CTGGCGTCAG
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00057   Mean Expected Number 0.003   +strand   -191 : -182   TCCACGTgTC
AC RSP00068   Mean Expected Number 0.004   -strand   -182 : -191   GACACGTgGA
AC RSP00117   Mean Expected Number 0.002   +strand   -174 : -162   tATTATTTTTAAA
AC RSP00188   Mean Expected Number 0.003   +strand   -191 : -182   TCcACGTGTC
AC RSP00204   Mean Expected Number 0.001   -strand   -182 : -191   GACACGTGGa
AC RSP00340   Mean Expected Number 0.002   +strand   -191 : -182   TCCACGTGTC
AC RSP00524   Mean Expected Number 0.007   -strand   -183 : -189   ACACGTG
AC RSP00682   Mean Expected Number 0.001   -strand   -182 : -191   GaCACGTGGA
AC RSP00985   Mean Expected Number 0.007   +strand    -91 :  -82   AGTTAGGTTa
AC RSP01035   Mean Expected Number 0.007   +strand   -188 : -182   ACGTGTC
AC RSP01255   Mean Expected Number 0.001   -strand   -183 : -190   ACACGTGG
AC RSP01274   Mean Expected Number 0.003   +strand   -191 : -182   TCCACGTgTC
AC RSP01722   Mean Expected Number 0.000   +strand   -192 : -181   ATCCACGTGTCT
AC RSP01734   Mean Expected Number 0.007   +strand   -191 : -185   TCCACGT

  Totally      14 motifs of    14 different REs have been found


Description of REs found

   56. Group TF: ABF /AC: RSP00057//OS: Zea mays /GENE: rab28/RE: ABRE B /TF: ABF
   67. Group RE: UV LRE /AC: RSP00068//OS: Arabidopsis thaliana /GENE: CHS/RE: UV LRE /TF: unknown
  115. Group RE: AT-1 (2) /AC: RSP00117//OS: Nicotiana plumbaginifolia /GENE: cab-E/RE: AT-1 (2) /TF: unknown
  182. Group TF: ABI5 /AC: RSP00188//OS: Arabidopsis thaliana /GENE: AtEm1/RE: ABRE/1.2 /TF: ABI5
  197. Group TF: ABI5 /AC: RSP00204//OS: Arabidopsis thaliana /GENE: AtEm6/RE: ABRE/6.2 /TF: ABI5 ||Identical REs AC:  RSP01151
  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  651. Group TF: GBF3 /AC: RSP00682//OS: Arabidopsis thaliana /GENE: Adh/RE: -214 G-box (core) /TF: GBF3
  906. Group TF: PBP (Myb305) /AC: RSP00985//OS: Antirrhinum majus /GENE: gPAL2/RE: P-box /TF: PBP (Myb305)
  960. Group TF: ABI3; ABI5; AREB1 /AC: RSP01035//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 3 /TF: ABI3; ABI5; AREB1
 1158. Group TF: GBF1 /AC: RSP01255//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS2 /TF: GBF1
 1173. Group RE: ACE 1 /AC: RSP01274//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 1 /TF: unknown
 1530. Group RE: G-box /Group TF: STF1/HY5 /AC: RSP01722//OS: Arabidopsis thaliana /GENE: IAA17/AXR3 (At1g04250)/RE: G-box /TF: STF1/HY5
 1542. Group TF: CAMTA3 /AC: RSP01734//OS: Arabidopsis thaliana /GENE: CBF2/RE: CM4 /TF: CAMTA3