> PLPR0086 ..AC:X63060 ..OS:Pisum sativum ..GENE:lpcr ..PROD:protochlorophyllide reductase ..[ -200:  +51] ..CDS:+41 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.10   T -  0.38   C -  0.19

      1  atgaagtctg tgacactatt gtgacttcta ttggcacata tattaaaata
     51  tctttttctt ttatgaaatc caaacctcaa aaccttattg gttggtttga
    101  aaggatgtgg caaatgcaca tactgctaat tatcttatcc tcacatttca
    151  tgaataactc cttcacttTA TAAACTcaat ttcaaatcca tttttataat
    201  AACACCAACA CTTTTTATTA CATAAAATTT TCATATAGTA ATGGCTCTTC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00596   Mean Expected Number 0.007   -strand    -90 :  -95   GCCACA
AC RSP01039   Mean Expected Number 0.009   +strand   -102 :  -97   GAAAGG
AC RSP01053   Mean Expected Number 0.008   -strand    -62 :  -70   GATAAGATA
AC RSP01068   Mean Expected Number 0.006   +strand   -192 : -184   TGTGACACT
AC RSP01103   Mean Expected Number 0.007   +strand   -129 : -122   AAACCTCA
AC RSP01136   Mean Expected Number 0.007   -strand   -186 : -192   TGTCACA
AC RSP01229   Mean Expected Number 0.000   -strand   -100 : -113   tTCAAACCAACCAA
AC RSP01454   Mean Expected Number 0.001   -strand   -105 : -111   ACCAACC

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  572. Group RE: Box II EE2 /AC: RSP00596//OS: Lycopersicon esculentum /GENE: rbcS3A/RE: Box II EE2 /TF: unknown
  963. Group RE: Dof BS1 /Group TF: Dof family /AC: RSP01039//OS: Petroselinum crispum /GENE: Icy/RE: Dof BS1 /TF: Dof family
  973. Group TF: HvMCB1 /AC: RSP01053//OS: Hordeum vulgare /GENE: ITR1/RE: GATA-core /TF: HvMCB1
  987. Group TF: HvH21 /AC: RSP01068//OS: Hordeum vulgare /GENE: Synthetic OLIGOs/RE: HvH21 BS /TF: HvH21
 1021. Group RE: AC1 /AC: RSP01103//OS: Spinacia oleracea /GENE: rps22/RE: AC1 /TF: unknown
 1054. Group RE: TGTCACA motif /AC: RSP01136//OS: Cucumis melo /GENE: Cucumisin/RE: TGTCACA motif /TF: unknown
 1134. Group RE: P-box 4 /AC: RSP01229//OS: Arabidopsis thaliana /GENE: C4H/RE: P-box 4 /TF: unknown
 1325. Group RE: AC-II /Group TF: PtMYB4 /AC: RSP01454//OS: Pinus taeda /GENE: Synthetic OLIGO/RE: AC-II /TF: PtMYB4