> PLPR0087 ..AC:U28924 ..OS:Pisum sativum ..GENE:GS3B ..PROD:cytosolic glutamine synthetase ..[ -200:  +51] ..CDS:+90 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.39   G -  0.07   T -  0.37   C -  0.18

      1  aagtgataat ctattttatt tcatttctat ctttaagaaa ttaaaaaata
     51  accattttat tccaattttc aaaattcaat tgatctagta gataaaaaga
    101  ttctccgaag acaaccacta aaaagttaat aACAATttaa tagtaatttt
    151  ttctacatat cattctatTA TAAATAggtt catatctcac actttctttt
    201  AACCCTTACA AAAAGCCAGA GATTCCTCTG TAGCTATCTT TCAACAAAAC
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00536   Mean Expected Number 0.010   +strand   -198 : -192   GTGATAA
AC RSP00756   Mean Expected Number 0.005   +strand    -15 :   -8   CTCACACT
AC RSP01031   Mean Expected Number 0.009   -strand    -97 : -104   AGAATCTT
AC RSP01182   Mean Expected Number 0.000   +strand   -121 : -105   TTGATCTAGTAGATAAA
AC RSP01250   Mean Expected Number 0.007   +strand   -130 : -121   AAAATTCAAT

  Totally       5 motifs of     5 different REs have been found


Description of REs found

  512. Group RE: LRE-TATA AA2 /AC: RSP00536//OS: Lycopersicon esculentum /GENE: rbcS3C/RE: LRE-TATA AA2 /TF: unknown
  718. Group RE: submotif B /AC: RSP00756//OS: Solanum tuberosum /GENE: S2-RNase/RE: submotif B /TF: unknown
  956. Group TF: AEF /AC: RSP01031//OS: Arabidopsis thaliana /GENE: GapB/RE: AE box 2 /TF: AEF
 1094. Group TF: GS3A-F1 /AC: RSP01182//OS: Pisum sativum /GENE: GS3A/RE: GS3A-F1 BS /TF: GS3A-F1
 1154. Group TF: CBF-C /AC: RSP01250//OS: Arabidopsis thaliana /GENE: AtpC/RE: CBF-C BS /TF: CBF-C

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