> PLPR0111 ..AC:X97322 ..OS:Pisum sativum ..GENE:rpL9 ..PROD:ribosomal protein L9 ..[ -200:  +51] ..TSS:201 (+1) # Alternative TSS(s):  -12   -5   +6   +8 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.39   G -  0.22   T -  0.22   C -  0.18

      1  tatacatttg acggtataaa aaattgaagg gaaaaacaac tggtacgtcc
     51  gaagtaagta aagggtgcaa atagtaatcg aatattgggc taaacctaac
    101  cagcgctact agatttaaaa agcccaaaat ccgaacaaaa cccgcagaac
    151  aaaagtgcca cTATATATCa aacttagggt tttggaatca cattctggag
    201  TGGTGAGCGA CACAGAGAGG CTTAGAAGGA GACACAGTTT GTACAATTCC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00230   Mean Expected Number 0.009   +strand   -108 :  -99   AACCTAACCa
AC RSP00279   Mean Expected Number 0.000   +strand    -27 :  -19   TTAGGGTTT
AC RSP00369   Mean Expected Number 0.000   -strand    -19 :  -27   AAACCCTAA
AC RSP01237   Mean Expected Number 0.003   +strand    -42 :  -33   CaCTATATAT
AC RSP01303   Mean Expected Number 0.002   -strand    -18 :  -27   aAAACCCTAA

  Totally       5 motifs of     5 different REs have been found


Description of REs found

  223. Group TF: PcMYB1 /AC: RSP00230//OS: Petroselinum crispum /GENE: CHS-1/RE: MRECHS /TF: PcMYB1
  270. Group RE: inverted Telo box /AC: RSP00279//OS: Arabidopsis thaliana /GENE: A-p40/RE: inverted Telo box /TF: unknown ||Identical REs AC:  RSP00448
  354. Group RE: telo-box /AC: RSP00369//OS: Arabidopsis thaliana /GENE: eEF1AA1/RE: telo-box /TF: unknown
 1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown
 1196. Group RE: Telo box /AC: RSP01303//OS: Arabidopsis thaliana /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown