> PLPR0112 ..AC:AJ292756 ..OS:Arabidopsis thaliana ..GENE:pyk10 ..PROD:ribosomal protein L9 ..[ -200:  +51] ..TSS+3522 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.45   G -  0.13   T -  0.28   C -  0.14

      1  acaacctata acgtcaatat ccatgtacgt agtaataatt aggatatgac
     51  acgaacacac gatatcttga tatatacaaa atgaaaactt aaaaattgat
    101  taatatggcc tggctgggta tattattaaa aaaacataaa gagagatcaa
    151  taattgattc gaagatcacT ATATAAAgaa cgtcttcgat atgtaaaaga
    201  AACCATCCTA AACATTTTTT CTTGAATAAA ATCAGAATTA CAAACAAAAA
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00999   Mean Expected Number 0.006   +strand    -35 :  -25   TCACTATaTAA
AC RSP01060   Mean Expected Number 0.006   +strand    -53 :  -45   CAATAATTG
AC RSP01060   Mean Expected Number 0.006   -strand    -45 :  -53   CAATTATTG
AC RSP01077   Mean Expected Number 0.004   +strand    -53 :  -45   CAATAATTG

  Totally       4 motifs of     3 different REs have been found


Description of REs found

  920. Group TF: 3AF3 /AC: RSP00999//OS: Nicotiana tabacum /GENE: rbcS-3A/RE: 3'-III element /TF: 3AF3
  980. Group TF: Hahb-4 /AC: RSP01060//OS: Helianthus annuus /GENE: OLIGOs/RE: Hahb-4 BS /TF: Hahb-4
  995. Group TF: CpbZIP1; CpbZIP2 (short) /AC: RSP01077//OS: Craterostigma plantagineum (Scrophulariaceae) /GENE: CpC2/RE: HDZIP BS /TF: CpbZIP1; CpbZIP2 (short)