> PLPR0114 ..AC:X56268 ..OS:Nicotiana tabacum ..GENE:GNT1 ..PROD:auxin-induced protein ..[ -200: +51] ..TSS:201 (+1) # Alternative TSS(s): +5 |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.45 G - 0.12 T - 0.27 C - 0.16
1 ccaaaatata tagtataaga agaattggta aagaaaataa taaaataaga
51 accttcaacc acttcctcaa attttgagac ttgtgcttat taaattagaa
101 aatttaattc tcaaaaagaa acattaaatc gttacttggt taGCAATaca
151 cttcattgat tttcatgcTA TAAAAGaaga ccacagttca agagagaacc
201 ACCACTGGAA ATTCCATAAC ATAGTAAATT AGCAAAAAAA TTGAGAACCA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00259 Mean Expected Number 0.004 +strand -64 : -58 TGGTTAG
AC RSP00654 Mean Expected Number 0.002 +strand -145 : -136 CAaCCACTTC
Totally 2 motifs of 2 different REs have been found
Description of REs found
252. Group TF: ATMyb2 /AC: RSP00259//OS: Arabidopsis thaliana /GENE: rd22/RE: ATMyb2 BS /TF: ATMyb2
628. Group RE: CT-B /AC: RSP00654//OS: Spinacia oleracea /GENE: PetH/RE: CT-B /TF: unknown
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