> PLPR0115 ..AC:X56269 ..OS:Nicotiana tabacum ..GENE:GNT35 ..PROD:auxin-induced protein ..[ -200:  +51] ..TSS:201 (+1) # Alternative TSS(s):   +5 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.41   G -  0.14   T -  0.28   C -  0.18

      1  aaacagtaaa tataggaacc ttcaaccact ccctcatatt ttgagactta
     51  agcttattat aaaagtattc ggtcaatatg gaaacatgta attacaaaat
    101  tgtattctca aagaggaaac attaaatcat ctatttggtt ggtaagacac
    151  ttccttgatt tctccttcTA TAAAAGaaga ccacaattaa agagagaacc
    201  ACCACTGGAA ATTGCTTAAC ATAGTAAATT AGCAACAAAT TGAGAACCAA
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00489   Mean Expected Number 0.003   -strand    -57 :  -66   TACCaACCAA
AC RSP00749   Mean Expected Number 0.000   -strand   -101 : -112   ATTTTGTAATTA
AC RSP00773   Mean Expected Number 0.005   -strand    -72 :  -81   TGATTTAATG
AC RSP01454   Mean Expected Number 0.002   -strand    -58 :  -64   ACCAACC
AC RSP01776   Mean Expected Number 0.001   +strand    -18 :   -8   ACAATTAAAGA

  Totally       5 motifs of     5 different REs have been found


Description of REs found

  465. Group RE: UVLRE2 /AC: RSP00489//OS: Glycine max /GENE: chs1/RE: UVLRE2 /TF: unknown
  711. Group TF: GT-1 /AC: RSP00749//OS: Catharanthus roseus /GENE: STR/RE: BN /TF: GT-1
  729. Group RE: Box III /AC: RSP00773//OS: Brassica oleracea /GENE: SLR1/RE: Box III /TF: unknown
 1325. Group RE: AC-II /Group TF: PtMYB4 /AC: RSP01454//OS: Pinus taeda /GENE: Synthetic OLIGO/RE: AC-II /TF: PtMYB4
 1575. Group TF: SIP1 /AC: RSP01776//OS: Lotus japonicus /GENE: AT-rich motif/RE: 39-bp element /TF: SIP1