> PLPR0119 ..AC:Y11037 ..OS:Beta vulgaris ..GENE:BV-16/1 ..PROD:V-ATPase, c subunit ..[ -200:  +51] ..CDS:+176 ..TSS+1152 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.32   G -  0.10   T -  0.28   C -  0.29

      1  ctacttgact acaaaccttc catagttcca tgacacttcc atctgagccc
     51  atgagataaa attaaggaat acaaacacaa aactcaacaa ccaacccgaa
    101  atatcgatcg gacttgttag cacgtgttat gttgggtccc atccaagaaa
    151  ctttctctct cctcctcctt caTAAAAAAA ccttctcact gatcccatcc
    201  AGAAAAAATC CCGATAAATT ATTGATCTCT ATTCACTCAC CTCTCTTTTC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00115   Mean Expected Number 0.004   -strand    +32 :  +22   ATAGAgATCAA
AC RSP00524   Mean Expected Number 0.006   -strand    -74 :  -80   ACACGTG
AC RSP00635   Mean Expected Number 0.002   +strand    -66 :  -59   GGTCCCAT
AC RSP00653   Mean Expected Number 0.007   +strand    -48 :  -38   TTCTCTCTCCT
AC RSP00755   Mean Expected Number 0.008   +strand   -136 : -130   AGGAATA
AC RSP00817   Mean Expected Number 0.002   -strand    -73 :  -82   aACACGTGCT
AC RSP00865   Mean Expected Number 0.003   -strand    -39 :  -47   GGAGAGAGA
AC RSP00978   Mean Expected Number 0.002   +strand    -82 :  -73   AgCACGTGTT
AC RSP01003   Mean Expected Number 0.008   +strand   -143 : -134   AaAATTAAGG
AC RSP01030   Mean Expected Number 0.006   +strand    -55 :  -48   AGAAACTT

  Totally      10 motifs of    10 different REs have been found


Description of REs found

  113. Group TF: ATBP-1 /AC: RSP00115//OS: Pisum sativum /GENE: GS2/RE: BOX 1 /TF: ATBP-1
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  611. Group RE: NDE Box 3 /AC: RSP00635//OS: Glycine max /GENE: SAUR 15A/RE: NDE Box 3 /TF: unknown
  627. Group RE: CT-LB /AC: RSP00653//OS: Spinacia oleracea /GENE: petH/RE: CT-LB /TF: unknown
  717. Group RE: submotif A /AC: RSP00755//OS: Solanum tuberosum /GENE: S2-RNase/RE: submotif A /TF: unknown
  763. Group TF: ACE-binding TF /AC: RSP00817//OS: Arabidopsis thaliana /GENE: CFI/RE: ACE-core (AtCFI) /TF: ACE-binding TF
  801. Group TF: BPC1 /AC: RSP00865//OS: Arabidopsis thaliana /GENE: STK/RE: GA-6 /TF: BPC1
  900. Group RE: G-box /AC: RSP00978//OS: Glycine max /GENE: vspA/RE: G-box /TF: unknown
  928. Group TF: DEF/GLO /AC: RSP01003//OS: Antirrhinum majus /GENE: DEFH125/RE: CArG1 /TF: DEF/GLO
  955. Group TF: AEF /AC: RSP01030//OS: Arabidopsis thaliana /GENE: GapB/RE: AE box 1 /TF: AEF