> PLPR0120 ..AC:X66135.1 ..OS:Spinacia oleracea ..GENE:rps1 ..PROD:chloroplastic ribosomal protein S1..[ -200: +51] ..CDS:+52 ..TSS:201 (+1) # Alternative TSS(s): -42 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.33 G - 0.11 T - 0.24 C - 0.32
1 tggaccattg ccgcaacaag tctattactc ttttcaagca agcaatcgga
51 ccctcttaca caacacacac cactacacca tcagccatca accaaatctt
101 gtgcatattg ttgggccaaC CAATctcaag tttaacaacc tctctctacc
151 gtatcatcaa accaacctct ctctctccac tctactcatc cccttatctg
201 CGTATCTCAA CAAACAACAA CATAGGAAGA AGATCAAAGA GTAGCAACAA
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00864 Mean Expected Number 0.002 -strand -25 : -33 AGAGAGAGA
AC RSP00865 Mean Expected Number 0.003 -strand -23 : -31 GGAGAGAGA
Totally 2 motifs of 2 different REs have been found
Description of REs found
800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
801. Group TF: BPC1 /AC: RSP00865//OS: Arabidopsis thaliana /GENE: STK/RE: GA-6 /TF: BPC1
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