> PLPR0121 ..AC:U14599 ..OS:Zea mays ..GENE:Bz2 ..PROD:unknown seed protein ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.24   G -  0.27   T -  0.17   C -  0.32

      1  caatgttatt accaacacgt gctgttctgc tctcgtgtaa tgtccagcta
     51  caagcacgcg cgcgagccga atttggacgc accagaatca gttagctcgc
    101  accaacccgc acgagcaccg accggTCAAT gacacgactc gccagtcgcc
    151  actaccggtt cccgtttaaa ttgccggccg catcaagctg agggctgagg
    201  CAGAGAGGTG CCAACAGAAG TCACGTCGAG ACCAGCCGGC CGGCCGGACT
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00179   Mean Expected Number 0.003   +strand    -36 :  -30   TTTAAAT
AC RSP00652   Mean Expected Number 0.006   -strand    -43 :  -50   CCGGTAGT
AC RSP00817   Mean Expected Number 0.003   +strand   -187 : -178   aACACGTGCT
AC RSP00950   Mean Expected Number 0.006   +strand   -103 :  -93   CgCACCAACCC
AC RSP00978   Mean Expected Number 0.003   -strand   -178 : -187   AgCACGTGTT
AC RSP01083   Mean Expected Number 0.001   +strand   -104 :  -93   TCgCACCAACCC

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  173. Group RE: AT-rich motif /AC: RSP00179//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: AT-rich motif /TF: unknown
  626. Group TF: C1 /AC: RSP00652//OS: Zea mays /GENE: a1/RE: C1 DBS /TF: C1
  763. Group TF: ACE-binding TF /AC: RSP00817//OS: Arabidopsis thaliana /GENE: CFI/RE: ACE-core (AtCFI) /TF: ACE-binding TF
  879. Group RE: CTCACCAACCC motif /AC: RSP00950//OS: Petroselinum crispum /GENE: 4CL-1/RE: CTCACCAACCC motif /TF: unknown
  900. Group RE: G-box /AC: RSP00978//OS: Glycine max /GENE: vspA/RE: G-box /TF: unknown
 1001. Group TF: DcMYB1 /AC: RSP01083//OS: Daucus carota /GENE: DcPAL1/RE: box-L5 /TF: DcMYB1

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