> PLPR0122 ..AC:U01377 ..OS:Arabidopsis thaliana ..GENE:cor15a ..PROD:unknown seed protein ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.32   G -  0.14   T -  0.34   C -  0.21

      1  gtagccacaa tttcatggcc gacctgcttt ttttttcttc ttctttctga
     51  aaaccacaaa tatgattaca cgtggcctga aaagaacgaa cagaaactcg
    101  gtaatgtgca aaaaatatct tactcttaat acgtgtaatt ttggagtgta
    151  ataggtctat cgatcTATAA AACgatacta ttggagatta gattcttctc
    201  ATCTCACTTT GTTCATCTAA AAACTCCTCC TTTCATTTCC AAACAAAAAC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00002   Mean Expected Number 0.000   +strand   -133 : -125   ACACGTGGC
AC RSP00153   Mean Expected Number 0.001   +strand   -133 : -124   aCACGTGGCC
AC RSP00175   Mean Expected Number 0.001   +strand   -132 : -125   CACGTGGC
AC RSP00204   Mean Expected Number 0.001   +strand   -134 : -125   tACACGTGGC
AC RSP00405   Mean Expected Number 0.003   +strand    -61 :  -54   TTTGGAGT
AC RSP00463   Mean Expected Number 0.000   +strand   -191 : -169   ATTTCATGGCCGACCTGCTTTTT
AC RSP00524   Mean Expected Number 0.007   +strand   -133 : -127   ACACGTG
AC RSP00682   Mean Expected Number 0.001   -strand   -125 : -134   GCCACGTGtA
AC RSP00783   Mean Expected Number 0.000   +strand   -134 : -125   TACACGTGGC
AC RSP00887   Mean Expected Number 0.003   -strand     -4 :  -12   AAGAATCTA
AC RSP01034   Mean Expected Number 0.003   +strand   -131 : -125   ACGTGGC
AC RSP01255   Mean Expected Number 0.001   +strand   -133 : -126   ACACGTGG
AC RSP01288   Mean Expected Number 0.004   +strand    -72 :  -65   ATACGTGT
AC RSP01702   Mean Expected Number 0.007   -strand    -64 :  -73   tACACGTATT
AC RSP01718   Mean Expected Number 0.001   -strand    -63 :  -74   TTACACGTATtA

  Totally      15 motifs of    15 different REs have been found


Description of REs found

    2. Group RE: ABRE-3 /AC: RSP00002//OS: Brassica napus /GENE: Oleosin/RE: ABRE-3 /TF: unknown
  149. Group RE: Box II /AC: RSP00153//OS: Petroselinum crispum /GENE: CHS/RE: Box II /TF: CPRF-1; CPRF-2; CPRF-3; ||Identical REs AC:  RSP00154
  169. Group RE: ABRE /Group TF: ABF /AC: RSP00175//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: ABRE /TF: ABF ||Identical REs AC:  RSP00723  RSP01570
  197. Group TF: ABI5 /AC: RSP00204//OS: Arabidopsis thaliana /GENE: AtEm6/RE: ABRE/6.2 /TF: ABI5 ||Identical REs AC:  RSP01151
  387. Group RE: adjb /AC: RSP00405//OS: Nicotiana tabacum /GENE: RNP2/RE: adjb /TF: unknown
  441. Group TF: CBF1 /AC: RSP00463//OS: Arabidopsis thaliana /GENE: COR15a/RE: C-repeat/DRE /TF: CBF1
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  651. Group TF: GBF3 /AC: RSP00682//OS: Arabidopsis thaliana /GENE: Adh/RE: -214 G-box (core) /TF: GBF3
  738. Group TF: G-box binding TF /AC: RSP00783//OS: Nicotiana tabacum /GENE: OLIGO-GUS/RE: G-box 7 /TF: G-box binding TF
  819. Group TF: CCA1 /AC: RSP00887//OS: Arabidopsis thaliana /GENE: AtAOX1a/RE: CCA1 motif (1) /TF: CCA1
  959. Group TF: ABI3; ABI5; AREB1 /AC: RSP01034//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 1/2 /TF: ABI3; ABI5; AREB1
 1158. Group TF: GBF1 /AC: RSP01255//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS2 /TF: GBF1
 1185. Group RE: Z-DNA-motif /AC: RSP01288//OS: Arabidopsis thaliana /GENE: cab1/RE: Z-DNA-motif /TF: unknown
 1511. Group RE: ACGT1 /AC: RSP01702//OS: Arabidopsis thaliana /GENE: XERO2/RE: ACGT1 /TF: unknown
 1526. Group TF: STF1/HY5 /AC: RSP01718//OS: Arabidopsis thaliana /GENE: IAA3/SHY2 (At1g04240)/RE: G/A-box (1) /TF: STF1/HY5

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