> PLPR0124 ..AC:J03920 ..OS:Glycine max ..GENE:Aux22 ..PROD:auxin-induction related protein ..[ -200: +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.24 G - 0.10 T - 0.38 C - 0.28
1 cgttggatgt ctcccatatc gaacttatta ttggtggttc ggcgagggga
51 caaactttgt ccccacaatt gtttctcttt ctcatgtgac cgaccacttc
101 cccttacttg atctgtcATT GCtcccactt aacctctctt ttttttccat
151 tcactttctc tctctcTATA TATAtaaagc cctttctatt ccatattcct
201 AACAATTCAA TTCATTCATC CTTCACTACT ACACCAAATT AATAGAAATT
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00263 Mean Expected Number 0.000 -strand -192 : -200 CATCCAACG
AC RSP00445 Mean Expected Number 0.009 -strand -57 : -66 AAAAAAGAGA
AC RSP01237 Mean Expected Number 0.002 +strand -37 : -28 CTCTATATAT
AC RSP01237 Mean Expected Number 0.002 -strand -22 : -31 CTtTATATAT
Totally 4 motifs of 3 different REs have been found
Description of REs found
255. Group RE: Non /AC: RSP00263//OS: Triticum aestivum /GENE: H3/RE: Non /TF: unknown ||Identical REs AC: RSP01563
425. Group TF: Dof1 /AC: RSP00445//OS: Zea mays /GENE: cyPPDK1/RE: box e /TF: Dof1
1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown
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