> PLPR0129 ..AC:Y07648 ..OS:Arabidopsis thaliana ..GENE:nit1 ..PROD:nitrilase ..[ -200:  +51] ..TSS+4309 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.41   G -  0.16   T -  0.24   C -  0.20

      1  agtaggtttg atgtgaactt tacaaaaaaa acaaaaacaa atcaatgcag
     51  agaaaagaaa ccacgtgggc tagtcccacc ttgtttcatt tccaccacag
    101  gttcgatctt cgttaccgtc tCCAATagga aaataaacgt gaccacaaaa
    151  aaaaaacaaa aaaaaagtcT ATATATTgct tctctcaagt ctctgagtgt
    201  CATGAACCAA AGTAAAAAAC AAAGACTCGA GTTGATATGT CTAGTACTAA
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00153   Mean Expected Number 0.001   +strand   -140 : -131   CCACGTGGgC
AC RSP00495   Mean Expected Number 0.009   -strand   -177 : -184   TGTAAAGT
AC RSP00718   Mean Expected Number 0.001   +strand   -140 : -133   CCACGTGG
AC RSP00718   Mean Expected Number 0.001   -strand   -133 : -140   CCACGTGG
AC RSP01139   Mean Expected Number 0.002   -strand   -135 : -143   ACGTGGTTT
AC RSP01237   Mean Expected Number 0.006   +strand    -34 :  -25   gTCTATATAT

  Totally       6 motifs of     5 different REs have been found


Description of REs found

  149. Group RE: Box II /AC: RSP00153//OS: Petroselinum crispum /GENE: CHS/RE: Box II /TF: CPRF-1; CPRF-2; CPRF-3; ||Identical REs AC:  RSP00154
  471. Group RE: P-box 2 /AC: RSP00495//OS: Triticum aestivum /GENE: LMW-glutenin/RE: P-box 2 /TF: unknown ||Identical REs AC:  RSP00686
  683. Group TF: GBF /AC: RSP00718//OS: Arabidopsis thaliana /GENE: Adh/RE: G-box-1 /TF: GBF ||Identical REs AC:  RSP01254
 1057. Group RE: Region B1 /AC: RSP01139//OS: Zea mays /GENE: Adh1/RE: Region B1 /TF: unknown
 1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown