> PLPR0131 ..AC:AF486816 ..OS:Nicotiana benthamiana ..GENE:PCNA ..PROD:proliferating cell nuclear antigen ..[ -200: +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.25 G - 0.15 T - 0.26 C - 0.34
1 agaggccata ctacttactt cgtcggcctt tccgcggcag acccagtgat
51 atacgggcta aagcagccca aaatagaggc gggaaaaata ttttttccac
101 tcggcagttc atttccattc ccgCCAATag cgagccctga attcttgagc
151 acacctccca attcagcagc TATATAAAcc ctagccccta tttcccaccc
201 ATTTTCTCTA CTTCTCTCTC AGACACTATC AGTCCTTATC CCTCCTCCCC
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00015 Mean Expected Number 0.001 -strand -115 : -122 TTTCCCGC
AC RSP00299 Mean Expected Number 0.002 +strand -84 : -73 ATTCCCGCCAAT
Totally 2 motifs of 2 different REs have been found
Description of REs found
14. Group TF: E2F1 /AC: RSP00015//OS: Arabidopsis thaliana /GENE: AtCDC6/RE: E2F1-BE /TF: E2F1 ||Identical REs AC: RSP00165 RSP00298
288. Group TF: E2F /AC: RSP00299//OS: Nicotiana benthamiana /GENE: PCNA/RE: E2F-2 /TF: E2F
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