> PLPR0134 ..AC:X03677 ..OS:Vicia faba ..GENE:LeB4 ..PROD:legumin B ..[ -200:  +51] ..CDS:+58 ..TSS+2698 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.28   G -  0.14   T -  0.29   C -  0.29

      1  tatggatatc tactaatcat catctatctg tgaagaataa aagaagcggc
     51  cacaagcgca gcgtcgcaca tatgatgtgt atcaaattag gactccatag
    101  ccatgcatgc tgaagaatgt cacacacgtt ctgtcacacg tgttactctc
    151  tcactgttct cctcttccTA TAAATCaccg cgccacagct tctccacttc
    201  ACCACTTCAC CACTTCACTC ACAATCCTTC ATTAGTTGTT TACTATCACA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00108   Mean Expected Number 0.003   +strand    -99 :  -92   CATGCATG
AC RSP00108   Mean Expected Number 0.003   -strand    -92 :  -99   CATGCATG
AC RSP00282   Mean Expected Number 0.009   -strand   -193 : -199   TATCCAT
AC RSP00524   Mean Expected Number 0.010   +strand    -65 :  -59   ACACGTG
AC RSP00524   Mean Expected Number 0.010   -strand    -58 :  -64   ACACGTG
AC RSP00872   Mean Expected Number 0.000   -strand    -75 :  -84   TGTGTGACAT
AC RSP01074   Mean Expected Number 0.001   +strand   -100 :  -91   cCATGCATGC
AC RSP01074   Mean Expected Number 0.001   -strand    -91 : -100   GCATGCATGG
AC RSP01076   Mean Expected Number 0.004   -strand    -92 : -101   CATGCaTGGC
AC RSP01170   Mean Expected Number 0.000   +strand   -107 :  -82   TCCATAGCCATGCATGCTGAAGAATG
AC RSP01171   Mean Expected Number 0.000   +strand   -107 :  -82   TCCATAGCCATGCATgCTGAAGAATG
AC RSP01172   Mean Expected Number 0.000   +strand   -107 :  -82   TCCATAGCCATGCAtGCTGaAGAATG
AC RSP01256   Mean Expected Number 0.003   +strand    -65 :  -58   ACACGTGT
AC RSP01256   Mean Expected Number 0.003   -strand    -58 :  -65   ACACGTGT
AC RSP01469   Mean Expected Number 0.007   +strand    -67 :  -58   TCACAcGTGT
AC RSP01727   Mean Expected Number 0.000   +strand    -67 :  -56   TCACACGTGTtA
AC RSP01727   Mean Expected Number 0.000   -strand    -56 :  -67   TaACACGTGTGA

  Totally      17 motifs of    12 different REs have been found


Description of REs found

  106. Group RE: RY4 /AC: RSP00108//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY4 /TF: unknown ||Identical REs AC:  RSP01169  RSP01452
  273. Group RE: Amylase-element /AC: RSP00282//OS: Oryza sativa /GENE: Amy3D/RE: Amylase-element /TF: unknown ||Identical REs AC:  RSP00675
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  808. Group RE: GLM2 /AC: RSP00872//OS: Triticum aestivum /GENE: LMWG-1D1/RE: GLM2 /TF: unknown
  992. Group TF: PvAlf /AC: RSP01074//OS: Arachis hypogea; Phaseolus vulgaris /GENE: Em/RE: Sph /TF: PvAlf
  994. Group TF: CpbZIP1; CpbZIP2 (short) /AC: RSP01076//OS: Craterostigma plantagineum (Scrophulariaceae) /GENE: CpC2/RE: ABRE III /TF: CpbZIP1; CpbZIP2 (short)
 1081. Group RE: CATGCATG-like motif /AC: RSP01170//OS: Vicia faba /GENE: PsLegB/RE: CATGCATG-like motif /TF: unknown
 1082. Group RE: CATGCATG-like motif /AC: RSP01171//OS: Glycine max /GENE: GmGly/RE: CATGCATG-like motif /TF: unknown
 1083. Group RE: CATGCATG-like motif /AC: RSP01172//OS: Pisum sativum /GENE: PsLegA/RE: CATGCATG-like motif /TF: unknown
 1159. Group TF: GBF1 /AC: RSP01256//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS3 /TF: GBF1
 1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)
 1535. Group TF: STF1/HY5 /AC: RSP01727//OS: Arabidopsis thaliana /GENE: SAUR-AC1-like (At3g60690)/RE: G-box (2) /TF: STF1/HY5