> PLPR0135 ..AC:X52908 ..OS:Ricinus communis ..GENE:ricin ..PROD:toxic lectin ..[ -200: +51] ..CDS:+36 ..TSS:201 (+1) # Alternative TSS(s): -2 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.33 G - 0.14 T - 0.40 C - 0.14
1 taaaccaatc aattcccttt aaacactgct tatgcatatt ctgtctcaat
51 ttatatatgg catgcatctt ccgtattaat ttataagtta tttttattga
101 tcaagtattt gtggttttct ttatataaaa aaatgtatta gtgtttttct
151 gtattaattt tataagttca tctttatgag aatgctaatg tatttggaca
201 GCCAATAAAA TTCCAGAATT GCTGCAATCA AAGATGAAAC CGGGAGGAAA
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00140 Mean Expected Number 0.008 +strand -115 : -103 AgTTATTTTTATT
AC RSP00231 Mean Expected Number 0.008 +strand -196 : -190 CCAATCA
Totally 2 motifs of 2 different REs have been found
Description of REs found
136. Group RE: AT-1 (2) /Group TF: AT-1 /AC: RSP00140//OS: Pisum sativum /GENE: rbcS-3.6/RE: AT-1 (2) /TF: AT-1
224. Group RE: CCAAT box 1 /AC: RSP00231//OS: Arabidopsis thaliana /GENE: AGAMAOUS (AG)/RE: CCAAT box 1 /TF: unknown
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