> PLPR0141 ..AC:K03289 ..OS:Phaseolus vulgaris ..GENE:dlec2 ..PROD:dlec2 mRNA ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.21   G -  0.17   T -  0.29   C -  0.33

      1  cagctttcac actatgacac cactggccat acacgttgcc acctcagctt
     51  tctcctcttc tcactatgac acgactggcc atgcatgcat gcatgctgcc
    101  acctcagctc ccgcctcttc acccgtgtct ttctctcatg tcgcagtgct
    151  gcgtgccaac ctcttctctc TATAAATAga gagaagagaa tgatggttaa
    201  TGCATGAATG CATACATGGC TTCCTCCAAG TTCTTCACTG TCCTCTTCCT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00104   Mean Expected Number 0.008   -strand    +19 :  +13   CCATGTA
AC RSP00108   Mean Expected Number 0.003   +strand   -121 : -114   CATGCATG
AC RSP00108   Mean Expected Number 0.003   +strand   -117 : -110   CATGCATG
AC RSP00108   Mean Expected Number 0.003   +strand   -113 : -106   CATGCATG
AC RSP00108   Mean Expected Number 0.003   -strand   -106 : -113   CATGCATG
AC RSP00108   Mean Expected Number 0.003   -strand   -110 : -117   CATGCATG
AC RSP00108   Mean Expected Number 0.003   -strand   -114 : -121   CATGCATG
AC RSP00132   Mean Expected Number 0.010   +strand   -163 : -156   GCCACCTC
AC RSP00132   Mean Expected Number 0.010   +strand   -103 :  -96   GCCACCTC
AC RSP00210   Mean Expected Number 0.001   +strand   -163 : -152   GCCACCTCAGCT
AC RSP00210   Mean Expected Number 0.001   +strand   -103 :  -92   GCCACCTCAGCT
AC RSP00248   Mean Expected Number 0.006   +strand   -163 : -154   GCCACcTCAG
AC RSP00248   Mean Expected Number 0.006   +strand   -103 :  -94   GCCACcTCAG
AC RSP00947   Mean Expected Number 0.008   +strand     -6 :   +1   GGTTAAT
AC RSP01074   Mean Expected Number 0.001   +strand   -122 : -113   cCATGCATGC
AC RSP01074   Mean Expected Number 0.001   +strand   -118 : -109   GCATGCATGC
AC RSP01074   Mean Expected Number 0.001   +strand   -114 : -105   GCATGCATGC
AC RSP01074   Mean Expected Number 0.001   -strand   -105 : -114   GCATGCATGC
AC RSP01074   Mean Expected Number 0.001   -strand   -109 : -118   GCATGCATGC
AC RSP01074   Mean Expected Number 0.001   -strand   -113 : -122   GCATGCATGG
AC RSP01076   Mean Expected Number 0.006   -strand   -114 : -123   CATGCaTGGC
AC RSP01296   Mean Expected Number 0.001   +strand    -31 :  -23   CTATAAATA
AC RSP01301   Mean Expected Number 0.008   +strand    -31 :  -22   CTATAAATAg
AC RSP01708   Mean Expected Number 0.003   +strand    -31 :  -22   CTATAAATAG
AC RSP01708   Mean Expected Number 0.003   -strand    -22 :  -31   CTATTTATAG

  Totally      25 motifs of    11 different REs have been found


Description of REs found

  102. Group RE: RY1 /AC: RSP00104//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY1 /TF: unknown
  106. Group RE: RY4 /AC: RSP00108//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY4 /TF: unknown ||Identical REs AC:  RSP01169  RSP01452
  130. Group TF: ROM1; ROM2 /AC: RSP00132//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: vicilin box /TF: ROM1; ROM2
  203. Group TF: MAT2 (ROM2) /AC: RSP00210//OS: French Phaseolus vulgaris /GENE: DLEC2/RE: DLEC2,B /TF: MAT2 (ROM2)
  241. Group TF: REB /AC: RSP00248//OS: Oryza sativa /GENE: alpha-globulin/RE: REB2 /TF: REB
  876. Group TF: GT-2 /AC: RSP00947//OS: Oryza sativa /GENE: PHYA/RE: GT1-bx /TF: GT-2
  992. Group TF: PvAlf /AC: RSP01074//OS: Arachis hypogea; Phaseolus vulgaris /GENE: Em/RE: Sph /TF: PvAlf
  994. Group TF: CpbZIP1; CpbZIP2 (short) /AC: RSP01076//OS: Craterostigma plantagineum (Scrophulariaceae) /GENE: CpC2/RE: ABRE III /TF: CpbZIP1; CpbZIP2 (short)
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302
 1516. Group TF: RIN /AC: RSP01708//OS: Solanum lycopersicum /GENE: Synthetic OLIGO/RE: RIN BSC [MEF2] /TF: RIN