> PLPR0145 ..AC:X02915 ..OS:Zea mays ..GENE:Adh2-N ..PROD:alcohol dehydrogenase 2N ..[ -200:  +51] ..CDS:+128 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.25   G -  0.20   T -  0.23   C -  0.32

      1  cgcgcggaat ccgttaaaac ggaatcggca gcggacaatc ggtcacctcc
     51  ctgcctccct ggtttctaac cgcgactaaa aaaaaaatcc gagcctttct
    101  tccccgactc gccgctacgg tccaggggtt cttgctgcct ccctcgtaga
    151  ctagactcta gaccacTATA TATAcagtac tcgtccccgt tttcttcctc
    201  ACCAACTTCT CATCATCAGC CAAGTGTAAA GAGTGCGAAG AAGCAGTAGC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00097   Mean Expected Number 0.005   +strand    -84 :  -77   ACGGTCCA
AC RSP00394   Mean Expected Number 0.008   +strand    +25 :  +31   TGTAAAG
AC RSP00683   Mean Expected Number 0.005   +strand    +19 :  +28   GCCAAGTGtA
AC RSP01180   Mean Expected Number 0.000   +strand   -172 : -148   CAGCGgACAATCGGTCACCTCCCTG
AC RSP01237   Mean Expected Number 0.002   +strand    -37 :  -28   CaCTATATAT
AC RSP01237   Mean Expected Number 0.001   -strand    -24 :  -33   CTgTATATAT
AC RSP01301   Mean Expected Number 0.009   +strand    -35 :  -26   CTATAtATAC

  Totally       7 motifs of     6 different REs have been found


Description of REs found

   95. Group RE: 9-mer box /AC: RSP00097//OS: Zea mays /GENE: GapC4/RE: 9-mer box /TF: unknown
  377. Group TF: PBF-1 /AC: RSP00394//OS: Zea mays /GENE: gamma-27kDa zein/RE: P-box (s) /TF: PBF-1 ||Identical REs AC:  RSP00396  RSP00429  RSP01402
  652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
 1092. Group RE: -160 footprint /AC: RSP01180//OS: Zea mays /GENE: Adh2/RE: -160 footprint /TF: unknown
 1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302