> PLPR0152 ..AC:X56337 ..OS:Oryza sativa ..GENE:RAmy3B ..PROD:alpha-amylase ..[ -200:  +51] ..CDS:+32 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.27   G -  0.20   T -  0.22   C -  0.31

      1  ccaaggctgc atagcacgac gcatacatat ctcacgcgcc ctttttatct
     51  gcttataaat gagatagccc acatagcagc gctgccgttt ctcctcttct
    101  ctcgttgggg gcaaccgaac ttatccaaca acgatccatc cATTGGccaa
    151  gtggctgccg tgctgcaccT ATAAATTcac atgcaccggc atgccactcc
    201  ACACAAGTGA GCTACTCGAA AGAAGCAGCA ATGGCAAAGC GCATAGCCTC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00056   Mean Expected Number 0.005   -strand    -46 :  -55   GCCACTTGgC
AC RSP00073   Mean Expected Number 0.007   +strand    -55 :  -46   GCCAaGTGGC
AC RSP00073   Mean Expected Number 0.007   -strand    -46 :  -55   GCCACtTGGC
AC RSP00153   Mean Expected Number 0.005   -strand    -47 :  -56   CCACtTGGCC
AC RSP00522   Mean Expected Number 0.010   -strand    -47 :  -53   CCACTTG
AC RSP00683   Mean Expected Number 0.005   +strand    -55 :  -46   GCCAAGTGGc
AC RSP01469   Mean Expected Number 0.007   -strand    +10 :   +1   TCACtTGTGT

  Totally       7 motifs of     6 different REs have been found


Description of REs found

   55. Group TF: ABI3 /AC: RSP00056//OS: Brassica napus /GENE: napA/RE: ABRE Bd /TF: ABI3
   72. Group TF: TAF-1 /AC: RSP00073//OS: Nicotiana tabacum /GENE: Synthetic OLIGO/RE: PA /TF: TAF-1 ||Identical REs AC:  RSP00274
  149. Group RE: Box II /AC: RSP00153//OS: Petroselinum crispum /GENE: CHS/RE: Box II /TF: CPRF-1; CPRF-2; CPRF-3; ||Identical REs AC:  RSP00154
  498. Group TF: DPBF-1; DPBF-2 /AC: RSP00522//OS: Daucus carota /GENE: Dc3/RE: E2-core /TF: DPBF-1; DPBF-2
  652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
 1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)