> PLPR0155 ..AC:Y00687 ..OS:Oryza sativa ..GENE:type II glutelin ..PROD:type II glutelin ..[ -200:  +51] ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.34   G -  0.12   T -  0.30   C -  0.24

      1  gaaagagaga aagaacaaca caatgctgcg tcaattatac atatctgtat
     51  gtccatcatt attcatccac ctttcgtgta ccacacttca tatatcataa
    101  gagtcacttc acgtctggac attaacaaac tctatcttaa catttagatg
    151  caagagcctt tatctcacTA TAAATGcacg atgatttctc attgtttctc
    201  ACAAAAAGCA TTCAGTTCAT TAGTCCTACA ACAACATGGC ATCCATAAAT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00192   Mean Expected Number 0.004   +strand    -78 :  -67   TAACAAACTCTA
AC RSP00195   Mean Expected Number 0.001   +strand   -128 : -118   TtCGTGTACCA
AC RSP00642   Mean Expected Number 0.009   +strand    -30 :  -23   TAAATGCA
AC RSP00691   Mean Expected Number 0.000   +strand   -130 : -116   CTTTCGTGTACCACA
AC RSP00692   Mean Expected Number 0.000   +strand   -181 : -164   ACAATGCTGCGTCAATTA
AC RSP00694   Mean Expected Number 0.001   +strand    -77 :  -65   AACAAACTCTATC
AC RSP01017   Mean Expected Number 0.005   -strand     -2 :   -9   AGAAACAA

  Totally       7 motifs of     7 different REs have been found


Description of REs found

  185. Group RE: AACA motif /AC: RSP00192//OS: Oryza sativa /GENE: Gt3/RE: AACA motif /TF: unknown
  188. Group RE: Box II /AC: RSP00195//OS: Oryza sativa /GENE: Gt2/RE: Box II /TF: unknown
  617. Group RE: L1-box /AC: RSP00642//OS: Arabidopsis thaliana /GENE: PDF1/RE: L1-box /TF: unknown
  657. Group RE: Box II /AC: RSP00691//OS: Oryza sativa /GENE: Gt1/RE: Box II /TF: unknown
  658. Group RE: Box III /AC: RSP00692//OS: Oryza sativa /GENE: Gt1/RE: Box III /TF: unknown
  660. Group RE: AACAA motif /AC: RSP00694//OS: Oryza sativa /GENE: Gt1/RE: AACAA motif /TF: unknown ||Identical REs AC:  RSP01062
  942. Group TF: AEF /AC: RSP01017//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 2 /TF: AEF

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