> PLPR0171 ..AC:D21160 ..OS:Oryza sativa ..GENE:Osg6B ..PROD:anther specific protein..[ -200:  +51] ..CDS:+76 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.39   G -  0.13   T -  0.24   C -  0.25

      1  ccggaaaaaa aaaacaggaa ggcataacag caaaacaaaa acagtggaaa
     51  ttaagcattg ctaattacaa acttttctga tcattcacac cattttcatg
    101  tttgatcccg ctcaaacttc acttcaacag cttagacact cttagctagc
    151  aaaagtccta atcacaggca tTATAAATGg cacaggcaat tagcctcatc
    201  TACACACACT GCCATCACTC CAATTAACCA AAGCTAATTA AGCTAGCTCA
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00543   Mean Expected Number 0.008   +strand    -35 :  -29   AGGCATT
AC RSP00595   Mean Expected Number 0.002   -strand    +43 :  +35   GCTTAATTA
AC RSP00749   Mean Expected Number 0.006   -strand   -128 : -139   AgTTTGTAATTA
AC RSP00917   Mean Expected Number 0.007   -strand    -73 :  -82   GTTGAAGTGA

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  519. Group RE: GT-1-like K /AC: RSP00543//OS: Lycopersicon esculentum /GENE: rbcS3B/RE: GT-1-like K /TF: unknown
  571. Group RE: Box II EE1 /AC: RSP00595//OS: Lycopersicon esculentum /GENE: rbcS3A/RE: Box II EE1 /TF: unknown
  711. Group TF: GT-1 /AC: RSP00749//OS: Catharanthus roseus /GENE: STR/RE: BN /TF: GT-1
  848. Group TF: Opaque-2 /AC: RSP00917//OS: Zea mays /GENE: b-32/RE: B5 /TF: Opaque-2

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