> PLPR0175 ..AC:X12512 ..OS:Nicotiana plumbaginifolia ..GENE:Cab-E ..PROD:chlorophyll a/..[ -200:  +51] ..TSS+1555 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.36   G -  0.16   T -  0.31   C -  0.16

      1  ttaggtaagt tttttaaaca taaaaagtat ctaaaaaaat cttgtcatgt
     51  ttaacggtgc tgaactttgc caaatggaca agaatgcaaa aggttaaaat
    101  tgcaatccaC CAATtgaaaa gtagatatag atactcaagg ataagggtct
    151  ttgggcctgt aaagccattT ATATACActt agtgcaaagc ccatgaaact
    201  CAAGCCTCAA ATCAACTCTT TCTTTTTGTG CATTCAAGAG TTATCATTTT
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00683   Mean Expected Number 0.003   +strand   -132 : -123   GCCAAaTGGA
AC RSP00741   Mean Expected Number 0.005   +strand   -113 : -102   AAAAGGTTAAAA
AC RSP00742   Mean Expected Number 0.000   -strand   -141 : -152   GCACCGTTAAAC
AC RSP00961   Mean Expected Number 0.006   +strand   -116 : -109   TGCAAAAG
AC RSP00996   Mean Expected Number 0.005   -strand    +16 :   +7   GTTGATTTGA
AC RSP01013   Mean Expected Number 0.007   +strand   -130 : -121   CAAATGGAcA

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  652. Group TF: GBF3 /AC: RSP00683//OS: Arabidopsis thaliana /GENE: Adh/RE: -190 half G-box (core) /TF: GBF3
  703. Group RE: box 1 /Group TF: GT-1 /AC: RSP00741//OS: Nicotiana plumbaginifolia /GENE: Cab-E/RE: box 1 /TF: GT-1
  704. Group TF: GT-1 /AC: RSP00742//OS: Nicotiana plumbaginifolia /GENE: Cab-E/RE: box 2r /TF: GT-1
  886. Group TF: BPBF /AC: RSP00961//OS: Hordeum vulgare /GENE: ITR1/RE: PB1 /TF: BPBF
  917. Group TF: Opaque-2 (O2) /AC: RSP00996//OS: Zea mays /GENE: cyPPDK1/RE: O2 BS-1 /TF: Opaque-2 (O2)
  938. Group TF: GAPF /AC: RSP01013//OS: Arabidopsis thaliana /GENE: GapA/RE: Gap box 1 /TF: GAPF