> PLPR0182 ..AC:AF217547 ..OS:Arabidopsis thaliana ..GENE:calmodulin-binding protein ..PROD:calmodulin-binding protein ..[ -200: +51] ..CDS:+165 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.36 G - 0.16 T - 0.31 C - 0.18
1 aacaaaagga gagtcgcata tatccacatt gcagcctaat aagtgtttga
51 taaaatgtct ggaaaagaaa aaaacactca acatcttctt tcaaaagcat
101 cattacttac actgctcatt cactcgtagA TTGCaactaa aaatatattt
151 gggcttgggc tctatcagtc aaaagaaatg ggtttgggtt tgtttaatta
201 ATTTCTCAAA CCCAATTAAA CCCTAAGAGA AATTGAAGAT TTTTCATTTC
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00279 Mean Expected Number 0.003 -strand +26 : +18 TTAGGGTTT
AC RSP00369 Mean Expected Number 0.003 +strand +18 : +26 AAACCCTAA
AC RSP01303 Mean Expected Number 0.005 +strand +17 : +26 TAAACCCTAA
AC RSP01304 Mean Expected Number 0.003 +strand +17 : +26 TaAACCCTAA
Totally 4 motifs of 4 different REs have been found
Description of REs found
270. Group RE: inverted Telo box /AC: RSP00279//OS: Arabidopsis thaliana /GENE: A-p40/RE: inverted Telo box /TF: unknown ||Identical REs AC: RSP00448
354. Group RE: telo-box /AC: RSP00369//OS: Arabidopsis thaliana /GENE: eEF1AA1/RE: telo-box /TF: unknown
1196. Group RE: Telo box /AC: RSP01303//OS: Arabidopsis thaliana /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown
1197. Group RE: Telo box /AC: RSP01304//OS: Lycopersicon esculentum /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown
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