> PLPR0183 ..AC:AF234174 ..OS:Arabidopsis thaliana ..GENE:HRT ..PROD:viral resistance protein ..[ -200: +51] ..CDS:+47 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.27 G - 0.18 T - 0.39 C - 0.16
1 atctctttta actgatcaat cattaatcat aagatatatt tttgtagaga
51 accctcagcc aagagatcgg tagctagata gataaggttg acttgaggtc
101 aacttctagc ttagagtttt gataaaattt atagctttct tcatttatta
151 tagtaaacgt ttttaactca ttttcttttc agagaatatg tacccttggc
201 GTTCTTGTAC TGGTTCATCG TAGGTGATTC TCGACGACTA GTTGTTATGG
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00530 Mean Expected Number 0.007 +strand -199 : -188 TCTcTTTTAACT
AC RSP00917 Mean Expected Number 0.003 +strand -114 : -105 GTTGACTTGA
Totally 2 motifs of 2 different REs have been found
Description of REs found
506. Group RE: AT-rich F /AC: RSP00530//OS: Lycopersicon esculentum /GENE: rbcS3B/RE: AT-rich F /TF: unknown
848. Group TF: Opaque-2 /AC: RSP00917//OS: Zea mays /GENE: b-32/RE: B5 /TF: Opaque-2
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