> PLPR0184 ..AC:AF279129 ..OS:Arabidopsis thaliana ..GENE:FIN219 ..PROD:FIN219 ..[ -200:  +51] ..CDS:+505 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.27   G -  0.14   T -  0.32   C -  0.27

      1  agaaaaaatc agagatcccg tcggagaaag aaaaagagaa gatagagaga
     51  tacaagtaac ggcttccact aatctttcgc cttctacatt tttgctgctc
    101  cgtCCAATtt ttgtgtctat aaaataagac agcttctttc tcttgacttt
    151  ccaaattcac tcaactttct ctcactcctt ttttctctct ctctctctat
    201  CCTCTACAGA GCTCGCAGCA ACTAGCGCAG GTACTCTCTC TTTCTCACTC
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00163   Mean Expected Number 0.006   +strand    -24 :  -14   CCTTTTtTCTC
AC RSP00445   Mean Expected Number 0.002   +strand   -171 : -162   gAAAAAGAGA
AC RSP00735   Mean Expected Number 0.008   +strand   -197 : -190   AAAAATCA
AC RSP00860   Mean Expected Number 0.000   +strand   -176 : -168   AGAAAGAAA
AC RSP00861   Mean Expected Number 0.006   -strand    +45 :  +37   AGAAAGAGA
AC RSP00864   Mean Expected Number 0.005   -strand     -3 :  -11   AGAGAGAGA
AC RSP00864   Mean Expected Number 0.005   -strand     -5 :  -13   AGAGAGAGA
AC RSP00864   Mean Expected Number 0.005   -strand     -7 :  -15   AGAGAGAGA
AC RSP00864   Mean Expected Number 0.005   -strand     -9 :  -17   AGAGAGAGA
AC RSP01283   Mean Expected Number 0.000   -strand     -2 :  -18   tAGAGAGAGAGAGAGAA
AC RSP01283   Mean Expected Number 0.000   -strand     -4 :  -20   GAGAGAGAGAGAGAaAA
AC RSP01480   Mean Expected Number 0.009   -strand    -75 :  -82   TATTTTAT

  Totally      12 motifs of     8 different REs have been found


Description of REs found

  158. Group TF: ARF1 /AC: RSP00163//OS: Glycine max /GENE: Synthetic OLIGO/RE: DR5 /TF: ARF1
  425. Group TF: Dof1 /AC: RSP00445//OS: Zea mays /GENE: cyPPDK1/RE: box e /TF: Dof1
  698. Group TF: DET1; CCA1 /AC: RSP00735//OS: Arabidopsis thaliana /GENE: CAB2/RE: CCA1 BS /TF: DET1; CCA1
  796. Group TF: BPC1 /AC: RSP00860//OS: Arabidopsis thaliana /GENE: STK/RE: GA-1 /TF: BPC1
  797. Group TF: BPC1 /AC: RSP00861//OS: Arabidopsis thaliana /GENE: STK/RE: GA-2 /TF: BPC1
  800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
 1180. Group RE: GAGA element /AC: RSP01283//OS: OS: Glycine max /GENE: gsa1/RE: GAGA element /TF: unknown
 1348. Group TF: AT-1SNBP /AC: RSP01480//OS: Glycine max /GENE: GS15/RE: AT-cm /TF: AT-1SNBP